Query psy13951
Match_columns 130
No_of_seqs 208 out of 1233
Neff 9.4
Searched_HMMs 46136
Date Fri Aug 16 15:47:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13951.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13951hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF00135 COesterase: Carboxyle 100.0 7.9E-29 1.7E-33 189.8 6.6 119 11-129 116-236 (535)
2 COG2272 PnbA Carboxylesterase 100.0 5.9E-28 1.3E-32 180.2 10.3 114 16-129 90-208 (491)
3 KOG1515|consensus 99.9 6.7E-27 1.4E-31 170.3 9.9 107 5-121 74-186 (336)
4 cd00312 Esterase_lipase Estera 99.9 3.2E-26 7E-31 174.8 11.3 111 17-128 92-203 (493)
5 COG0657 Aes Esterase/lipase [L 99.9 6.3E-26 1.4E-30 164.6 9.6 100 15-124 74-175 (312)
6 PF07859 Abhydrolase_3: alpha/ 99.9 1.2E-24 2.7E-29 149.4 7.0 89 23-121 1-91 (211)
7 PRK10162 acetyl esterase; Prov 99.9 3.6E-23 7.8E-28 150.8 10.5 92 19-120 80-173 (318)
8 KOG1516|consensus 99.9 2.5E-23 5.5E-28 160.7 9.4 109 20-129 112-223 (545)
9 KOG4389|consensus 99.9 4.5E-22 9.8E-27 148.3 7.8 110 20-129 135-246 (601)
10 COG1506 DAP2 Dipeptidyl aminop 99.7 8.8E-17 1.9E-21 126.2 8.0 108 11-122 385-494 (620)
11 KOG4388|consensus 99.6 6E-16 1.3E-20 117.9 7.5 92 19-120 395-488 (880)
12 KOG4627|consensus 99.6 8E-16 1.7E-20 104.4 6.3 96 18-126 65-164 (270)
13 PF10340 DUF2424: Protein of u 99.6 2.1E-15 4.5E-20 111.1 8.6 91 19-120 121-214 (374)
14 TIGR01840 esterase_phb esteras 99.5 2.4E-13 5.1E-18 93.9 9.1 101 18-121 11-115 (212)
15 PF10503 Esterase_phd: Esteras 99.5 2.4E-13 5.1E-18 94.4 7.4 100 18-120 14-116 (220)
16 PLN00021 chlorophyllase 99.4 1.7E-12 3.8E-17 94.6 9.5 93 16-121 48-146 (313)
17 PRK10115 protease 2; Provision 99.4 1.5E-12 3.2E-17 103.5 8.2 101 17-121 442-544 (686)
18 PF12740 Chlorophyllase2: Chlo 99.3 4.9E-12 1.1E-16 89.4 7.9 104 6-122 3-112 (259)
19 KOG2100|consensus 99.3 5.9E-12 1.3E-16 100.8 8.0 108 11-122 517-629 (755)
20 PRK10566 esterase; Provisional 99.3 4.4E-11 9.5E-16 83.9 9.9 96 17-121 24-127 (249)
21 PRK13604 luxD acyl transferase 99.3 5.1E-11 1.1E-15 86.3 9.8 95 16-122 33-129 (307)
22 COG3509 LpqC Poly(3-hydroxybut 99.2 7.2E-11 1.6E-15 84.2 9.5 100 20-121 61-164 (312)
23 KOG2281|consensus 99.2 1.9E-11 4.2E-16 94.5 6.6 110 10-121 632-747 (867)
24 TIGR03101 hydr2_PEP hydrolase, 99.2 8.6E-11 1.9E-15 83.9 9.3 93 19-121 24-119 (266)
25 PF07224 Chlorophyllase: Chlor 99.2 9.1E-11 2E-15 82.6 7.8 96 13-121 39-140 (307)
26 PF00326 Peptidase_S9: Prolyl 99.2 2.9E-11 6.2E-16 83.3 4.1 75 42-120 7-83 (213)
27 TIGR02821 fghA_ester_D S-formy 99.1 9.1E-10 2E-14 78.9 10.8 102 18-121 40-158 (275)
28 PLN02298 hydrolase, alpha/beta 99.1 9.2E-10 2E-14 80.4 10.2 94 19-121 58-154 (330)
29 PF12695 Abhydrolase_5: Alpha/ 99.1 8.4E-10 1.8E-14 71.0 8.8 80 22-121 1-81 (145)
30 PLN02385 hydrolase; alpha/beta 99.0 1.8E-09 3.9E-14 79.6 9.4 94 18-121 85-182 (349)
31 PRK10985 putative hydrolase; P 99.0 2E-09 4.3E-14 78.8 9.4 92 18-120 56-150 (324)
32 PLN02442 S-formylglutathione h 99.0 2.2E-09 4.9E-14 77.3 9.5 103 16-121 43-163 (283)
33 COG4099 Predicted peptidase [G 99.0 1.2E-09 2.6E-14 78.2 7.8 101 11-120 181-288 (387)
34 TIGR03100 hydr1_PEP hydrolase, 99.0 2.7E-09 5.9E-14 76.4 9.7 92 21-121 27-120 (274)
35 cd00707 Pancreat_lipase_like P 99.0 3.1E-09 6.8E-14 76.3 8.9 89 17-120 33-131 (275)
36 PRK10673 acyl-CoA esterase; Pr 99.0 4.8E-09 1E-13 73.4 8.5 89 17-121 13-101 (255)
37 PLN02652 hydrolase; alpha/beta 98.9 4.4E-09 9.5E-14 79.1 8.4 93 18-122 134-229 (395)
38 TIGR00976 /NonD putative hydro 98.9 6.3E-09 1.4E-13 81.2 9.5 97 17-121 19-117 (550)
39 PHA02857 monoglyceride lipase; 98.9 7E-09 1.5E-13 73.7 9.0 91 18-120 23-116 (276)
40 PLN02511 hydrolase 98.9 1.2E-08 2.6E-13 76.5 10.5 92 19-121 99-193 (388)
41 KOG1552|consensus 98.9 5.7E-09 1.2E-13 73.3 7.8 92 19-122 59-151 (258)
42 TIGR03695 menH_SHCHC 2-succiny 98.9 2.6E-08 5.7E-13 68.1 9.6 87 21-121 2-90 (251)
43 TIGR02427 protocat_pcaD 3-oxoa 98.9 4.2E-08 9E-13 67.4 10.5 88 19-121 12-99 (251)
44 PRK10749 lysophospholipase L2; 98.9 1.7E-08 3.6E-13 74.0 8.7 90 19-120 53-150 (330)
45 TIGR03611 RutD pyrimidine util 98.9 4.2E-08 9.1E-13 68.0 10.2 88 19-120 12-99 (257)
46 COG1647 Esterase/lipase [Gener 98.9 1.3E-08 2.9E-13 70.1 7.1 95 21-128 16-112 (243)
47 PRK05077 frsA fermentation/res 98.8 3.3E-08 7.2E-13 74.8 9.9 92 17-120 191-284 (414)
48 TIGR01250 pro_imino_pep_2 prol 98.8 5.4E-08 1.2E-12 68.3 10.1 91 20-121 25-116 (288)
49 PRK00870 haloalkane dehalogena 98.8 7E-08 1.5E-12 69.6 10.3 89 20-121 46-135 (302)
50 COG0412 Dienelactone hydrolase 98.8 4.1E-08 8.9E-13 69.1 8.5 99 18-122 25-133 (236)
51 PF03403 PAF-AH_p_II: Platelet 98.8 1.5E-08 3.3E-13 75.8 6.3 100 18-120 98-247 (379)
52 PRK11460 putative hydrolase; P 98.8 6.3E-08 1.4E-12 67.9 9.1 34 87-120 89-122 (232)
53 PLN02211 methyl indole-3-aceta 98.8 1.1E-07 2.5E-12 68.0 10.3 92 16-120 14-106 (273)
54 PF12697 Abhydrolase_6: Alpha/ 98.7 1.2E-07 2.5E-12 64.0 9.1 84 23-120 1-85 (228)
55 COG2945 Predicted hydrolase of 98.7 1.5E-07 3.2E-12 63.7 9.2 97 17-122 25-124 (210)
56 KOG3847|consensus 98.7 5.6E-08 1.2E-12 70.2 7.5 103 15-120 113-260 (399)
57 PF00151 Lipase: Lipase; Inte 98.7 4.3E-08 9.3E-13 72.2 6.9 92 17-120 68-169 (331)
58 TIGR03056 bchO_mg_che_rel puta 98.7 1.6E-07 3.5E-12 66.2 9.5 88 20-121 28-115 (278)
59 TIGR03343 biphenyl_bphD 2-hydr 98.7 1E-07 2.3E-12 67.6 8.4 90 20-120 30-120 (282)
60 PLN02965 Probable pheophorbida 98.7 2.3E-07 4.9E-12 65.5 9.9 87 22-121 5-92 (255)
61 PRK03204 haloalkane dehalogena 98.7 2E-07 4.4E-12 67.0 9.4 88 20-121 34-121 (286)
62 PRK11126 2-succinyl-6-hydroxy- 98.7 1.3E-07 2.7E-12 65.8 7.8 84 21-121 3-86 (242)
63 PF02230 Abhydrolase_2: Phosph 98.7 3.7E-07 8E-12 63.1 10.1 103 16-122 10-126 (216)
64 KOG2564|consensus 98.7 1.1E-07 2.4E-12 67.8 7.3 91 18-121 72-166 (343)
65 PF05448 AXE1: Acetyl xylan es 98.7 6.5E-08 1.4E-12 70.9 6.4 104 16-125 79-200 (320)
66 COG0400 Predicted esterase [Ge 98.6 4.6E-07 1E-11 62.6 9.7 103 16-121 14-119 (207)
67 PLN02894 hydrolase, alpha/beta 98.6 5.2E-07 1.1E-11 68.0 10.5 92 18-121 103-196 (402)
68 PF02129 Peptidase_S15: X-Pro 98.6 1.9E-07 4.2E-12 66.7 7.8 98 13-120 13-120 (272)
69 TIGR02240 PHA_depoly_arom poly 98.6 4.3E-07 9.4E-12 64.7 9.5 86 21-121 26-111 (276)
70 PLN02824 hydrolase, alpha/beta 98.6 4.1E-07 8.9E-12 65.3 9.4 89 20-121 29-122 (294)
71 TIGR01249 pro_imino_pep_1 prol 98.6 1.1E-06 2.4E-11 63.7 10.6 87 21-120 28-114 (306)
72 KOG4391|consensus 98.6 6.8E-08 1.5E-12 66.8 3.6 94 17-120 75-168 (300)
73 KOG1455|consensus 98.6 8.4E-07 1.8E-11 63.9 9.2 94 18-120 52-148 (313)
74 TIGR03230 lipo_lipase lipoprot 98.5 7E-07 1.5E-11 67.9 9.3 94 18-120 39-138 (442)
75 PLN02872 triacylglycerol lipas 98.5 6.8E-07 1.5E-11 67.3 9.0 98 19-122 73-181 (395)
76 COG2267 PldB Lysophospholipase 98.5 1E-06 2.2E-11 64.0 9.4 92 21-121 35-127 (298)
77 PF01738 DLH: Dienelactone hyd 98.5 5.4E-08 1.2E-12 67.3 2.5 99 18-122 12-119 (218)
78 TIGR01738 bioH putative pimelo 98.5 7.5E-07 1.6E-11 61.0 8.1 80 21-120 5-84 (245)
79 PRK14875 acetoin dehydrogenase 98.5 1.8E-06 4E-11 63.6 10.4 88 19-121 130-217 (371)
80 PRK03592 haloalkane dehalogena 98.5 1.5E-06 3.3E-11 62.4 9.5 86 20-121 27-113 (295)
81 COG3458 Acetyl esterase (deace 98.5 4.8E-07 1E-11 64.4 6.4 102 18-125 81-201 (321)
82 PLN02679 hydrolase, alpha/beta 98.5 2E-06 4.4E-11 63.8 10.1 84 21-120 89-174 (360)
83 COG4188 Predicted dienelactone 98.5 1.8E-06 4E-11 63.7 9.3 99 18-120 69-178 (365)
84 COG0429 Predicted hydrolase of 98.5 2E-06 4.4E-11 62.7 9.4 92 16-119 71-166 (345)
85 KOG3101|consensus 98.4 6.6E-07 1.4E-11 61.7 6.0 106 10-120 34-160 (283)
86 KOG1838|consensus 98.4 2.6E-06 5.6E-11 63.9 9.5 92 18-120 123-217 (409)
87 TIGR01836 PHA_synth_III_C poly 98.4 2.2E-06 4.7E-11 63.4 9.1 89 19-120 62-155 (350)
88 PRK10349 carboxylesterase BioH 98.4 2.9E-06 6.2E-11 59.6 9.3 81 21-121 14-94 (256)
89 PF12715 Abhydrolase_7: Abhydr 98.4 1.4E-06 3E-11 64.8 7.7 101 17-124 112-250 (390)
90 PRK05855 short chain dehydroge 98.4 3.1E-06 6.8E-11 65.8 10.1 90 20-122 25-115 (582)
91 TIGR03502 lipase_Pla1_cef extr 98.4 3.2E-06 7E-11 68.2 9.5 100 19-121 448-575 (792)
92 PRK07581 hypothetical protein; 98.4 5.3E-06 1.1E-10 60.9 9.9 91 19-121 40-144 (339)
93 PRK10439 enterobactin/ferric e 98.4 2.9E-06 6.3E-11 64.3 8.6 97 17-121 206-308 (411)
94 PLN02578 hydrolase 98.3 5.9E-06 1.3E-10 61.2 9.5 84 21-121 87-172 (354)
95 PRK06489 hypothetical protein; 98.3 8.7E-06 1.9E-10 60.4 10.4 90 20-121 69-174 (360)
96 PLN03087 BODYGUARD 1 domain co 98.3 7.8E-06 1.7E-10 63.1 9.9 88 20-121 201-294 (481)
97 KOG4178|consensus 98.3 8.8E-06 1.9E-10 59.3 9.5 90 19-121 43-133 (322)
98 PF00756 Esterase: Putative es 98.3 9.3E-07 2E-11 62.1 4.2 35 84-121 101-135 (251)
99 PF06500 DUF1100: Alpha/beta h 98.3 3.6E-06 7.8E-11 63.3 7.2 99 16-126 186-288 (411)
100 PRK11071 esterase YqiA; Provis 98.3 9.5E-06 2.1E-10 55.2 8.6 75 21-121 2-81 (190)
101 TIGR01607 PST-A Plasmodium sub 98.2 1.5E-05 3.3E-10 58.6 9.8 72 44-120 69-161 (332)
102 PLN03084 alpha/beta hydrolase 98.2 1.8E-05 3.8E-10 59.6 10.1 89 20-121 127-217 (383)
103 PF07819 PGAP1: PGAP1-like pro 98.2 1E-05 2.2E-10 56.6 8.3 93 21-122 5-106 (225)
104 KOG4409|consensus 98.2 6E-06 1.3E-10 60.6 7.0 90 18-121 88-180 (365)
105 TIGR01392 homoserO_Ac_trn homo 98.2 2E-05 4.2E-10 58.3 9.7 70 47-121 70-147 (351)
106 PF06342 DUF1057: Alpha/beta h 98.2 3.6E-05 7.8E-10 55.2 10.4 92 19-123 34-126 (297)
107 PLN02980 2-oxoglutarate decarb 98.1 2.3E-05 4.9E-10 68.2 10.2 91 19-121 1370-1465(1655)
108 KOG1454|consensus 98.1 3.6E-05 7.8E-10 56.7 9.5 90 18-120 56-147 (326)
109 KOG2382|consensus 98.1 1.4E-05 3.1E-10 58.1 6.9 92 16-119 48-142 (315)
110 PF05677 DUF818: Chlamydia CHL 98.1 3.5E-05 7.7E-10 56.6 8.3 96 19-122 136-236 (365)
111 PRK08775 homoserine O-acetyltr 98.0 7E-05 1.5E-09 55.2 9.4 61 48-121 98-158 (343)
112 PF10230 DUF2305: Uncharacteri 98.0 8.4E-05 1.8E-09 53.3 9.5 95 20-121 2-104 (266)
113 PF05728 UPF0227: Uncharacteri 98.0 4.1E-05 8.8E-10 52.2 7.3 21 100-120 58-78 (187)
114 TIGR01838 PHA_synth_I poly(R)- 98.0 7.6E-05 1.6E-09 58.3 9.3 86 21-117 189-278 (532)
115 PF05990 DUF900: Alpha/beta hy 97.9 2.2E-05 4.8E-10 55.2 5.0 21 100-120 92-112 (233)
116 PRK00175 metX homoserine O-ace 97.9 0.00019 4.2E-09 53.7 10.2 70 47-121 89-167 (379)
117 PRK05371 x-prolyl-dipeptidyl a 97.9 6.3E-05 1.4E-09 61.2 7.6 74 44-121 274-358 (767)
118 PF00975 Thioesterase: Thioest 97.8 0.00014 3.1E-09 50.2 7.5 82 22-121 2-86 (229)
119 COG4782 Uncharacterized protei 97.8 8.2E-05 1.8E-09 55.0 6.3 96 19-121 115-211 (377)
120 COG4757 Predicted alpha/beta h 97.8 2.6E-05 5.6E-10 54.6 3.4 81 38-123 45-127 (281)
121 COG3150 Predicted esterase [Ge 97.8 0.00015 3.3E-09 48.3 6.7 77 23-120 2-78 (191)
122 PF08538 DUF1749: Protein of u 97.8 0.00016 3.4E-09 52.6 7.3 97 19-122 32-129 (303)
123 KOG2237|consensus 97.7 9.6E-05 2.1E-09 58.1 6.0 102 15-120 465-568 (712)
124 PRK07868 acyl-CoA synthetase; 97.7 0.00043 9.3E-09 57.9 9.6 85 19-120 66-160 (994)
125 PF05057 DUF676: Putative seri 97.6 0.00022 4.9E-09 49.5 6.5 37 84-120 61-97 (217)
126 COG1770 PtrB Protease II [Amin 97.6 0.00014 3.1E-09 57.4 5.9 102 15-120 443-546 (682)
127 PF00561 Abhydrolase_1: alpha/ 97.6 0.00051 1.1E-08 46.7 7.9 63 50-121 1-64 (230)
128 PTZ00472 serine carboxypeptida 97.6 0.00058 1.3E-08 52.7 8.4 21 100-120 170-190 (462)
129 COG0596 MhpC Predicted hydrola 97.6 0.00073 1.6E-08 45.7 8.1 85 20-120 21-107 (282)
130 KOG2112|consensus 97.5 0.0017 3.7E-08 44.7 9.3 44 78-121 70-113 (206)
131 COG2936 Predicted acyl esteras 97.5 0.00051 1.1E-08 53.8 7.4 99 15-121 40-144 (563)
132 PF05577 Peptidase_S28: Serine 97.5 0.00022 4.7E-09 54.4 5.2 99 20-120 29-132 (434)
133 PF09752 DUF2048: Uncharacteri 97.5 0.00088 1.9E-08 49.6 7.9 96 17-120 89-194 (348)
134 PF01674 Lipase_2: Lipase (cla 97.4 0.0008 1.7E-08 47.0 6.7 86 23-120 4-94 (219)
135 COG2819 Predicted hydrolase of 97.4 0.0036 7.8E-08 44.8 9.9 28 94-121 130-157 (264)
136 PRK06765 homoserine O-acetyltr 97.3 0.003 6.5E-08 47.7 9.6 40 77-121 141-181 (389)
137 COG3571 Predicted hydrolase of 97.3 0.0018 4E-08 43.2 7.1 92 21-120 15-108 (213)
138 KOG3975|consensus 97.3 0.0044 9.6E-08 44.1 9.0 104 10-121 19-130 (301)
139 PF03583 LIP: Secretory lipase 97.3 0.0013 2.8E-08 47.8 6.7 69 44-120 21-90 (290)
140 COG0627 Predicted esterase [Ge 97.2 0.0041 8.9E-08 45.8 9.2 106 15-122 49-173 (316)
141 PF11187 DUF2974: Protein of u 97.2 0.0011 2.4E-08 46.4 5.5 40 79-121 65-104 (224)
142 PF01764 Lipase_3: Lipase (cla 97.2 0.0011 2.4E-08 42.4 5.0 34 85-120 50-83 (140)
143 PF03283 PAE: Pectinacetyleste 97.1 0.0023 4.9E-08 47.9 7.0 97 19-119 49-174 (361)
144 PRK04940 hypothetical protein; 97.1 0.0051 1.1E-07 41.7 7.9 20 101-120 60-79 (180)
145 KOG4667|consensus 97.1 0.0047 1E-07 43.1 7.8 87 19-120 32-124 (269)
146 PF11288 DUF3089: Protein of u 97.0 0.00087 1.9E-08 46.3 3.6 68 49-120 45-114 (207)
147 PF08840 BAAT_C: BAAT / Acyl-C 97.0 0.0012 2.6E-08 45.8 4.2 39 79-120 3-41 (213)
148 PF12146 Hydrolase_4: Putative 96.9 0.0014 3E-08 38.4 3.6 37 19-58 15-52 (79)
149 PF07082 DUF1350: Protein of u 96.9 0.0097 2.1E-07 42.2 8.2 87 22-120 18-109 (250)
150 COG2939 Carboxypeptidase C (ca 96.8 0.008 1.7E-07 46.5 7.8 104 14-120 95-217 (498)
151 KOG3724|consensus 96.8 0.0067 1.4E-07 49.3 7.5 40 83-122 160-203 (973)
152 KOG4840|consensus 96.8 0.011 2.5E-07 41.5 7.8 66 44-120 61-126 (299)
153 KOG2624|consensus 96.8 0.0038 8.3E-08 47.3 5.6 97 18-120 71-180 (403)
154 COG2382 Fes Enterochelin ester 96.7 0.0025 5.5E-08 46.2 4.3 105 10-121 88-197 (299)
155 COG3319 Thioesterase domains o 96.7 0.0058 1.2E-07 43.7 5.8 89 21-126 1-90 (257)
156 COG3208 GrsT Predicted thioest 96.7 0.0092 2E-07 42.1 6.6 89 18-121 6-94 (244)
157 PF06028 DUF915: Alpha/beta hy 96.7 0.023 5E-07 40.6 8.7 33 84-121 91-123 (255)
158 COG1075 LipA Predicted acetylt 96.6 0.0044 9.6E-08 45.9 5.1 38 81-120 109-146 (336)
159 TIGR01839 PHA_synth_II poly(R) 96.6 0.027 5.9E-07 44.5 9.5 84 18-117 214-304 (560)
160 cd00741 Lipase Lipase. Lipase 96.6 0.005 1.1E-07 40.2 4.9 22 99-120 26-47 (153)
161 PF11144 DUF2920: Protein of u 96.6 0.023 5.1E-07 43.0 8.7 40 80-120 164-203 (403)
162 PF06057 VirJ: Bacterial virul 96.5 0.011 2.3E-07 40.4 5.9 81 21-119 3-86 (192)
163 KOG3967|consensus 96.5 0.021 4.6E-07 39.9 7.2 96 19-120 100-209 (297)
164 PLN02408 phospholipase A1 96.4 0.0077 1.7E-07 45.1 4.9 35 86-120 185-219 (365)
165 COG4814 Uncharacterized protei 96.3 0.025 5.5E-07 40.3 6.8 33 83-120 123-155 (288)
166 PLN02454 triacylglycerol lipas 96.3 0.01 2.2E-07 45.1 5.2 36 85-120 212-247 (414)
167 PF00450 Peptidase_S10: Serine 96.2 0.054 1.2E-06 40.7 8.7 101 16-120 36-155 (415)
168 COG2021 MET2 Homoserine acetyl 96.0 0.11 2.5E-06 38.8 9.5 69 47-120 90-166 (368)
169 cd00519 Lipase_3 Lipase (class 95.9 0.019 4E-07 40.0 4.9 21 100-120 127-147 (229)
170 PLN02571 triacylglycerol lipas 95.9 0.019 4.1E-07 43.7 5.0 37 85-121 210-246 (413)
171 PLN02324 triacylglycerol lipas 95.8 0.02 4.4E-07 43.5 4.9 32 89-120 203-234 (415)
172 PLN02802 triacylglycerol lipas 95.8 0.02 4.3E-07 44.6 4.8 35 86-120 315-349 (509)
173 PF06821 Ser_hydrolase: Serine 95.6 0.03 6.5E-07 37.6 4.7 20 100-119 54-73 (171)
174 PLN02753 triacylglycerol lipas 95.6 0.027 5.9E-07 44.0 4.9 36 85-120 293-331 (531)
175 PRK10252 entF enterobactin syn 95.5 0.073 1.6E-06 45.7 7.7 84 21-120 1069-1152(1296)
176 KOG2183|consensus 95.5 0.059 1.3E-06 41.1 6.2 73 44-119 106-185 (492)
177 PLN02761 lipase class 3 family 95.4 0.033 7.1E-07 43.5 4.9 35 86-120 275-313 (527)
178 KOG1553|consensus 95.4 0.16 3.4E-06 38.2 8.1 65 46-120 265-330 (517)
179 PF11339 DUF3141: Protein of u 95.3 0.29 6.3E-06 38.5 9.6 91 16-120 65-159 (581)
180 PLN03016 sinapoylglucose-malat 95.2 0.18 3.9E-06 38.8 8.2 21 100-120 164-184 (433)
181 PLN02719 triacylglycerol lipas 95.1 0.046 1E-06 42.6 4.8 36 85-120 279-317 (518)
182 PLN00413 triacylglycerol lipas 95.1 0.049 1.1E-06 42.2 4.8 21 100-120 283-303 (479)
183 PLN02310 triacylglycerol lipas 95.0 0.052 1.1E-06 41.3 4.8 20 101-120 209-228 (405)
184 TIGR03712 acc_sec_asp2 accesso 95.0 0.13 2.8E-06 39.9 6.9 89 18-121 287-377 (511)
185 KOG2984|consensus 95.0 0.034 7.3E-07 38.7 3.4 85 22-120 44-133 (277)
186 PLN02733 phosphatidylcholine-s 94.8 0.064 1.4E-06 41.3 4.8 21 100-120 161-181 (440)
187 PLN02209 serine carboxypeptida 94.7 0.29 6.2E-06 37.8 8.3 21 100-120 166-186 (437)
188 PLN03037 lipase class 3 family 94.7 0.07 1.5E-06 41.7 4.8 21 100-120 317-337 (525)
189 PLN02934 triacylglycerol lipas 94.5 0.069 1.5E-06 41.7 4.4 20 101-120 321-340 (515)
190 COG1505 Serine proteases of th 94.4 0.029 6.2E-07 44.4 2.3 97 19-120 420-519 (648)
191 PF02273 Acyl_transf_2: Acyl t 94.4 0.23 5E-06 35.6 6.4 98 12-121 22-121 (294)
192 PLN02847 triacylglycerol lipas 94.1 0.094 2E-06 41.7 4.5 21 101-121 251-271 (633)
193 PF03959 FSH1: Serine hydrolas 94.0 0.11 2.4E-06 35.8 4.4 40 78-120 82-121 (212)
194 PLN02162 triacylglycerol lipas 93.9 0.12 2.6E-06 40.0 4.7 21 100-120 277-297 (475)
195 KOG3043|consensus 93.9 0.38 8.2E-06 33.9 6.7 71 44-119 62-138 (242)
196 PF03991 Prion_octapep: Copper 93.9 0.023 5E-07 18.6 0.4 6 27-32 2-7 (8)
197 PF02450 LCAT: Lecithin:choles 93.7 0.25 5.5E-06 37.4 6.1 39 81-121 101-139 (389)
198 KOG2182|consensus 93.0 1.5 3.3E-05 34.3 9.2 97 19-119 85-190 (514)
199 COG3545 Predicted esterase of 93.0 0.33 7.2E-06 32.8 5.1 43 79-127 43-87 (181)
200 COG3946 VirJ Type IV secretory 92.9 0.16 3.4E-06 38.7 3.7 77 21-114 261-339 (456)
201 KOG4569|consensus 92.4 0.17 3.7E-06 37.6 3.5 22 100-121 170-191 (336)
202 COG3673 Uncharacterized conser 92.2 0.19 4.2E-06 37.3 3.3 38 80-121 105-142 (423)
203 COG3243 PhaC Poly(3-hydroxyalk 92.1 1.5 3.2E-05 33.8 8.1 65 41-120 131-200 (445)
204 PF08237 PE-PPE: PE-PPE domain 91.6 1.5 3.3E-05 30.8 7.3 66 49-120 2-67 (225)
205 PF12048 DUF3530: Protein of u 91.5 4.3 9.4E-05 29.9 10.0 22 101-122 193-214 (310)
206 PF06259 Abhydrolase_8: Alpha/ 91.0 2.5 5.5E-05 28.6 7.6 24 98-121 106-129 (177)
207 PF09994 DUF2235: Uncharacteri 90.9 0.48 1E-05 34.2 4.4 37 80-120 75-111 (277)
208 KOG1282|consensus 90.7 1.3 2.7E-05 34.5 6.7 32 86-120 156-187 (454)
209 COG5153 CVT17 Putative lipase 88.9 0.72 1.6E-05 33.9 3.9 20 101-120 276-295 (425)
210 KOG4540|consensus 88.9 0.72 1.6E-05 33.9 3.9 20 101-120 276-295 (425)
211 PLN02517 phosphatidylcholine-s 87.3 2.6 5.6E-05 34.0 6.3 21 100-120 212-232 (642)
212 COG4947 Uncharacterized protei 87.1 2.7 5.8E-05 28.7 5.4 30 86-120 91-120 (227)
213 PF01083 Cutinase: Cutinase; 86.8 1.9 4.1E-05 29.1 4.8 21 101-121 81-101 (179)
214 KOG2369|consensus 86.7 2.8 6.1E-05 32.6 6.1 37 83-120 165-201 (473)
215 PLN02213 sinapoylglucose-malat 86.1 3.4 7.4E-05 30.4 6.2 39 80-120 32-70 (319)
216 PF12242 Eno-Rase_NADH_b: NAD( 86.1 2.6 5.7E-05 24.5 4.4 39 80-120 21-59 (78)
217 PF02089 Palm_thioest: Palmito 85.9 3 6.5E-05 30.4 5.6 20 101-120 80-99 (279)
218 smart00824 PKS_TE Thioesterase 85.7 4.9 0.00011 26.5 6.4 21 100-120 63-83 (212)
219 PF10081 Abhydrolase_9: Alpha/ 82.0 7.2 0.00016 28.5 6.1 87 23-118 37-126 (289)
220 PF05277 DUF726: Protein of un 82.0 3.1 6.8E-05 31.2 4.5 21 100-120 219-239 (345)
221 PF05705 DUF829: Eukaryotic pr 79.1 8.6 0.00019 26.8 5.8 62 46-120 24-86 (240)
222 KOG3253|consensus 78.4 7.3 0.00016 31.7 5.6 22 100-121 249-270 (784)
223 KOG2541|consensus 77.1 26 0.00057 25.6 8.0 64 44-120 48-111 (296)
224 KOG2551|consensus 74.8 5.9 0.00013 27.9 3.8 34 84-120 90-123 (230)
225 KOG2565|consensus 74.7 37 0.00079 26.2 8.1 88 19-120 152-248 (469)
226 PF10142 PhoPQ_related: PhoPQ- 74.5 36 0.00077 25.9 9.7 109 17-125 61-197 (367)
227 PF07519 Tannase: Tannase and 71.5 20 0.00044 28.1 6.5 95 23-121 31-135 (474)
228 cd07224 Pat_like Patatin-like 70.3 8.6 0.00019 27.0 3.9 34 85-122 17-50 (233)
229 cd07218 Pat_iPLA2 Calcium-inde 70.3 7.6 0.00016 27.6 3.7 17 105-121 34-50 (245)
230 PLN02606 palmitoyl-protein thi 67.5 44 0.00096 24.8 7.1 20 101-120 95-114 (306)
231 PF04083 Abhydro_lipase: Parti 67.4 5.7 0.00012 22.1 2.1 14 15-28 38-51 (63)
232 PF14314 Methyltrans_Mon: Viru 67.2 9.8 0.00021 31.2 4.1 41 89-129 312-352 (675)
233 PF03096 Ndr: Ndr family; Int 66.7 33 0.00071 25.1 6.3 93 19-121 22-119 (283)
234 cd07205 Pat_PNPLA6_PNPLA7_NTE1 66.4 11 0.00023 24.9 3.7 32 84-121 17-48 (175)
235 cd07210 Pat_hypo_W_succinogene 65.8 11 0.00024 26.3 3.7 22 97-120 26-47 (221)
236 cd07230 Pat_TGL4-5_like Triacy 65.0 11 0.00025 29.0 3.9 23 96-120 98-120 (421)
237 PF01734 Patatin: Patatin-like 64.6 11 0.00025 24.3 3.5 20 103-122 29-48 (204)
238 KOG2931|consensus 61.7 65 0.0014 24.0 8.8 39 79-122 105-143 (326)
239 KOG2029|consensus 60.7 55 0.0012 26.8 6.9 22 99-120 524-545 (697)
240 cd07207 Pat_ExoU_VipD_like Exo 60.6 16 0.00034 24.5 3.6 23 97-121 25-47 (194)
241 TIGR01849 PHB_depoly_PhaZ poly 58.8 29 0.00062 26.8 5.1 58 49-119 129-186 (406)
242 cd07198 Patatin Patatin-like p 58.4 17 0.00038 23.9 3.5 32 84-121 15-46 (172)
243 smart00827 PKS_AT Acyl transfe 58.4 17 0.00037 26.0 3.8 24 94-119 77-100 (298)
244 cd07204 Pat_PNPLA_like Patatin 56.8 20 0.00043 25.3 3.8 19 104-122 34-52 (243)
245 PRK05579 bifunctional phosphop 55.9 60 0.0013 25.0 6.4 15 44-58 141-155 (399)
246 cd07228 Pat_NTE_like_bacteria 55.8 12 0.00026 24.8 2.4 18 104-121 31-48 (175)
247 PF06059 DUF930: Domain of Unk 55.8 9.8 0.00021 23.4 1.8 57 4-60 29-86 (101)
248 PF05576 Peptidase_S37: PS-10 55.1 22 0.00048 27.6 3.9 88 19-117 62-150 (448)
249 COG3007 Uncharacterized paraqu 54.9 25 0.00053 26.2 4.0 40 80-120 22-61 (398)
250 PF05116 S6PP: Sucrose-6F-phos 54.5 13 0.00029 26.2 2.6 26 82-110 166-191 (247)
251 PF13242 Hydrolase_like: HAD-h 53.9 15 0.00032 20.6 2.3 16 94-109 15-30 (75)
252 PF12566 DUF3748: Protein of u 53.8 17 0.00038 22.9 2.7 28 21-52 14-41 (122)
253 PLN02633 palmitoyl protein thi 53.8 91 0.002 23.3 8.4 20 101-120 94-113 (314)
254 cd07214 Pat17_isozyme_like Pat 52.9 31 0.00067 25.9 4.4 17 104-120 46-62 (349)
255 TIGR00128 fabD malonyl CoA-acy 51.2 26 0.00056 25.0 3.7 23 95-119 78-101 (290)
256 cd07225 Pat_PNPLA6_PNPLA7 Pata 51.1 24 0.00053 25.9 3.6 31 85-121 33-63 (306)
257 cd07222 Pat_PNPLA4 Patatin-lik 50.6 26 0.00057 24.8 3.6 18 104-121 34-51 (246)
258 COG4425 Predicted membrane pro 50.1 31 0.00067 27.3 4.0 87 22-115 324-411 (588)
259 KOG1643|consensus 50.0 17 0.00036 25.5 2.4 54 73-127 174-228 (247)
260 PRK10279 hypothetical protein; 49.6 27 0.00059 25.7 3.6 30 85-120 23-52 (300)
261 cd07231 Pat_SDP1-like Sugar-De 49.3 33 0.00071 25.7 3.9 23 97-121 94-116 (323)
262 cd07229 Pat_TGL3_like Triacylg 48.8 27 0.00058 26.8 3.5 25 95-121 107-131 (391)
263 cd07206 Pat_TGL3-4-5_SDP1 Tria 48.5 35 0.00075 25.2 4.0 23 97-121 95-117 (298)
264 cd07220 Pat_PNPLA2 Patatin-lik 48.3 28 0.00061 24.8 3.4 19 103-121 38-56 (249)
265 TIGR00632 vsr DNA mismatch end 48.1 16 0.00034 23.1 1.9 14 19-32 55-68 (117)
266 PF10686 DUF2493: Protein of u 47.7 29 0.00063 19.7 2.8 31 19-54 30-62 (71)
267 COG1752 RssA Predicted esteras 47.5 29 0.00063 25.3 3.5 26 94-121 34-59 (306)
268 cd07213 Pat17_PNPLA8_PNPLA9_li 46.8 19 0.0004 26.1 2.4 17 104-120 37-53 (288)
269 cd07212 Pat_PNPLA9 Patatin-lik 45.4 20 0.00044 26.4 2.4 17 104-120 35-51 (312)
270 PF14253 AbiH: Bacteriophage a 45.1 13 0.00028 26.3 1.3 14 99-112 233-246 (270)
271 cd07208 Pat_hypo_Ecoli_yjju_li 44.2 23 0.00051 25.1 2.5 18 104-121 30-47 (266)
272 cd07209 Pat_hypo_Ecoli_Z1214_l 44.0 23 0.00051 24.4 2.4 19 104-122 29-47 (215)
273 PRK15001 SAM-dependent 23S rib 43.5 46 0.00099 25.4 4.1 40 79-119 25-64 (378)
274 cd03379 beta_CA_cladeD Carboni 43.2 66 0.0014 20.7 4.3 24 81-109 41-64 (142)
275 cd07211 Pat_PNPLA8 Patatin-lik 43.1 22 0.00048 25.9 2.3 16 105-120 45-60 (308)
276 PF08484 Methyltransf_14: C-me 43.0 54 0.0012 21.7 3.9 21 99-119 67-87 (160)
277 KOG2385|consensus 42.7 65 0.0014 26.0 4.8 49 72-120 418-466 (633)
278 cd07232 Pat_PLPL Patain-like p 42.0 24 0.00053 27.1 2.5 17 104-120 98-114 (407)
279 KOG1551|consensus 41.8 19 0.00041 26.5 1.7 21 100-120 194-214 (371)
280 cd07227 Pat_Fungal_NTE1 Fungal 41.5 42 0.00092 24.3 3.5 24 96-121 35-58 (269)
281 TIGR02806 clostrip clostripain 41.2 21 0.00046 28.0 2.0 17 17-33 112-128 (476)
282 COG3727 Vsr DNA G:T-mismatch r 40.2 27 0.00058 22.7 2.0 13 19-31 56-68 (150)
283 COG3914 Spy Predicted O-linked 40.1 1.6E+02 0.0034 24.2 6.5 30 83-112 471-500 (620)
284 KOG2170|consensus 39.8 1E+02 0.0022 23.2 5.1 24 97-120 210-234 (344)
285 cd07199 Pat17_PNPLA8_PNPLA9_li 39.7 26 0.00055 24.8 2.2 18 104-121 37-54 (258)
286 cd01819 Patatin_and_cPLA2 Pata 39.6 63 0.0014 21.0 3.9 18 102-119 29-46 (155)
287 COG0466 Lon ATP-dependent Lon 39.6 83 0.0018 26.4 5.1 39 81-119 639-691 (782)
288 PLN02752 [acyl-carrier protein 39.6 47 0.001 24.6 3.6 16 104-119 127-142 (343)
289 PF14041 Lipoprotein_21: LppP/ 39.2 18 0.0004 21.3 1.2 38 21-59 26-64 (89)
290 cd07216 Pat17_PNPLA8_PNPLA9_li 38.9 23 0.0005 25.9 1.9 16 104-119 45-60 (309)
291 TIGR03131 malonate_mdcH malona 38.9 55 0.0012 23.5 3.8 24 94-119 71-94 (295)
292 KOG4372|consensus 38.9 21 0.00046 27.5 1.7 18 100-117 149-166 (405)
293 COG1073 Hydrolases of the alph 38.3 73 0.0016 22.0 4.3 13 18-30 47-59 (299)
294 cd07219 Pat_PNPLA1 Patatin-lik 37.6 52 0.0011 25.2 3.5 18 104-121 47-64 (382)
295 KOG2853|consensus 37.5 1E+02 0.0022 23.8 5.0 73 23-97 89-165 (509)
296 TIGR02690 resist_ArsH arsenica 37.2 1.1E+02 0.0023 21.5 4.9 12 100-111 128-139 (219)
297 COG0431 Predicted flavoprotein 37.2 84 0.0018 21.1 4.3 52 44-116 65-116 (184)
298 PF02662 FlpD: Methyl-viologen 37.0 78 0.0017 20.0 3.8 35 77-111 70-104 (124)
299 cd07217 Pat17_PNPLA8_PNPLA9_li 36.5 33 0.00071 25.8 2.4 17 104-120 44-60 (344)
300 TIGR02816 pfaB_fam PfaB family 35.8 60 0.0013 26.1 3.8 24 94-119 260-283 (538)
301 COG1908 FrhD Coenzyme F420-red 35.1 93 0.002 19.9 3.8 33 79-111 73-105 (132)
302 PLN02382 probable sucrose-phos 34.7 50 0.0011 25.4 3.1 27 84-110 178-204 (413)
303 cd07215 Pat17_PNPLA8_PNPLA9_li 34.0 34 0.00074 25.3 2.1 17 104-120 43-59 (329)
304 PF03575 Peptidase_S51: Peptid 33.8 21 0.00045 23.2 0.8 14 102-115 69-82 (154)
305 PF02350 Epimerase_2: UDP-N-ac 33.6 47 0.001 24.8 2.8 20 91-110 135-154 (346)
306 KOG0256|consensus 33.5 70 0.0015 25.0 3.6 24 97-120 143-166 (471)
307 PF09757 Arb2: Arb2 domain; I 33.4 14 0.0003 24.8 0.0 41 18-58 97-148 (178)
308 COG3101 Uncharacterized protei 33.1 13 0.00027 24.5 -0.2 70 17-95 39-111 (180)
309 PHA01735 hypothetical protein 33.0 52 0.0011 18.7 2.2 18 75-92 28-45 (76)
310 cd07223 Pat_PNPLA5-mammals Pat 33.0 80 0.0017 24.4 3.9 20 103-122 43-62 (405)
311 COG1189 Predicted rRNA methyla 32.8 62 0.0013 23.2 3.1 30 89-118 67-98 (245)
312 PF13419 HAD_2: Haloacid dehal 32.6 83 0.0018 19.8 3.6 22 94-115 144-165 (176)
313 COG0381 WecB UDP-N-acetylgluco 32.1 59 0.0013 25.0 3.1 23 90-112 157-179 (383)
314 cd00382 beta_CA Carbonic anhyd 30.8 97 0.0021 19.3 3.5 30 81-115 44-73 (119)
315 cd07036 TPP_PYR_E1-PDHc-beta_l 30.5 1.7E+02 0.0036 19.5 5.7 38 18-56 102-142 (167)
316 TIGR03607 patatin-related prot 30.2 45 0.00097 27.9 2.3 17 104-120 69-85 (739)
317 KOG1283|consensus 30.0 2.5E+02 0.0055 21.4 6.9 21 100-120 121-141 (414)
318 cd07221 Pat_PNPLA3 Patatin-lik 29.4 56 0.0012 23.3 2.5 18 104-121 35-52 (252)
319 PRK00414 gmhA phosphoheptose i 29.0 1.9E+02 0.0041 19.6 5.0 36 80-119 28-63 (192)
320 PLN02200 adenylate kinase fami 28.6 1E+02 0.0022 21.6 3.7 39 14-55 36-74 (234)
321 KOG0258|consensus 28.3 98 0.0021 24.1 3.7 39 87-126 124-163 (475)
322 TIGR01454 AHBA_synth_RP 3-amin 28.0 91 0.002 20.9 3.3 26 94-119 142-167 (205)
323 PLN03006 carbonate dehydratase 27.9 75 0.0016 23.5 3.0 33 82-119 158-190 (301)
324 COG5039 Exopolysaccharide bios 27.9 57 0.0012 24.3 2.3 11 22-32 88-98 (339)
325 cd08757 SAM_PNT_ESE Sterile al 27.6 1E+02 0.0022 17.3 2.9 36 83-118 8-43 (68)
326 TIGR01449 PGP_bact 2-phosphogl 27.6 81 0.0018 21.1 3.0 26 94-119 152-177 (213)
327 PF06925 MGDG_synth: Monogalac 27.6 53 0.0011 21.6 2.0 20 88-107 147-166 (169)
328 cd00883 beta_CA_cladeA Carboni 27.3 81 0.0018 21.3 2.9 33 81-118 66-98 (182)
329 cd03015 PRX_Typ2cys Peroxiredo 27.1 1E+02 0.0022 20.2 3.4 38 19-56 29-70 (173)
330 TIGR00236 wecB UDP-N-acetylglu 27.0 2.6E+02 0.0056 20.6 6.1 35 20-59 86-120 (365)
331 PF03415 Peptidase_C11: Clostr 27.0 24 0.00051 27.0 0.3 15 17-31 96-110 (397)
332 PF06309 Torsin: Torsin; Inte 26.8 81 0.0017 20.2 2.6 12 17-28 49-60 (127)
333 PF06344 Parecho_VpG: Parechov 26.6 49 0.0011 13.7 1.1 7 1-7 3-9 (20)
334 PRK15412 thiol:disulfide inter 26.6 86 0.0019 20.9 2.9 40 18-58 67-106 (185)
335 TIGR01544 HAD-SF-IE haloacid d 25.8 86 0.0019 22.9 2.9 18 98-115 209-226 (277)
336 KOG2214|consensus 25.8 35 0.00076 27.2 1.0 17 104-120 205-221 (543)
337 cd02958 UAS UAS family; UAS is 25.7 49 0.0011 20.0 1.5 12 18-29 16-27 (114)
338 PF06658 DUF1168: Protein of u 25.4 16 0.00035 23.9 -0.7 12 104-115 25-36 (142)
339 TIGR01491 HAD-SF-IB-PSPlk HAD- 25.3 95 0.0021 20.4 3.0 26 94-119 157-182 (201)
340 TIGR01549 HAD-SF-IA-v1 haloaci 25.1 1.6E+02 0.0035 18.4 4.0 23 94-117 129-151 (154)
341 TIGR01488 HAD-SF-IB Haloacid D 24.4 80 0.0017 20.4 2.4 23 94-116 152-174 (177)
342 PRK08942 D,D-heptose 1,7-bisph 24.3 1.3E+02 0.0029 19.7 3.6 26 94-119 114-139 (181)
343 TIGR01509 HAD-SF-IA-v3 haloaci 24.1 1.6E+02 0.0034 18.9 3.8 24 94-117 151-174 (183)
344 KOG4153|consensus 24.0 1.8E+02 0.0039 21.4 4.2 35 17-56 254-288 (358)
345 TIGR00213 GmhB_yaeD D,D-heptos 23.9 1.3E+02 0.0029 19.7 3.5 26 94-119 117-142 (176)
346 COG0031 CysK Cysteine synthase 23.9 1.4E+02 0.003 22.2 3.7 31 84-120 246-276 (300)
347 cd01459 vWA_copine_like VWA Co 23.8 2.8E+02 0.0062 19.9 5.9 58 51-110 34-91 (254)
348 PRK05282 (alpha)-aspartyl dipe 23.6 62 0.0013 22.9 1.9 17 101-117 112-128 (233)
349 PF00698 Acyl_transf_1: Acyl t 23.1 70 0.0015 23.3 2.1 24 94-119 79-102 (318)
350 PF00237 Ribosomal_L22: Riboso 22.9 1.6E+02 0.0034 17.8 3.4 27 81-107 42-69 (105)
351 PRK13288 pyrophosphatase PpaX; 22.9 1E+02 0.0023 20.7 2.9 26 94-119 149-174 (214)
352 PLN02770 haloacid dehalogenase 22.9 1.1E+02 0.0025 21.3 3.1 26 94-119 175-200 (248)
353 KOG4530|consensus 22.8 2.5E+02 0.0055 19.0 4.5 50 44-113 84-133 (199)
354 COG3675 Predicted lipase [Lipi 22.5 42 0.00091 24.9 0.8 32 85-120 163-194 (332)
355 TIGR01548 HAD-SF-IA-hyp1 haloa 22.5 1.6E+02 0.0035 19.5 3.7 23 94-116 172-194 (197)
356 PRK15219 carbonic anhydrase; P 22.4 1.2E+02 0.0025 21.8 3.0 33 81-118 128-160 (245)
357 TIGR02193 heptsyl_trn_I lipopo 22.1 3.1E+02 0.0067 19.8 5.8 19 100-118 254-272 (319)
358 PRK13936 phosphoheptose isomer 21.7 2.7E+02 0.0058 18.9 5.1 33 84-120 31-63 (197)
359 TIGR00385 dsbE periplasmic pro 21.6 85 0.0018 20.6 2.1 40 18-58 62-101 (173)
360 cd00884 beta_CA_cladeB Carboni 21.5 1.3E+02 0.0028 20.6 3.0 33 82-119 73-105 (190)
361 PRK01253 preprotein translocas 21.4 82 0.0018 16.9 1.6 37 84-120 15-51 (54)
362 cd02421 Peptidase_C39_likeD A 21.3 79 0.0017 19.2 1.8 17 17-33 67-83 (124)
363 PRK10382 alkyl hydroperoxide r 21.1 1.5E+02 0.0032 20.1 3.3 38 19-56 31-72 (187)
364 PRK15000 peroxidase; Provision 21.1 1.5E+02 0.0032 20.2 3.3 38 19-56 34-75 (200)
365 PF09177 Syntaxin-6_N: Syntaxi 21.0 24 0.00052 21.2 -0.6 24 77-100 53-76 (97)
366 COG0331 FabD (acyl-carrier-pro 20.9 1.4E+02 0.0031 22.1 3.3 22 99-120 83-104 (310)
367 cd03129 GAT1_Peptidase_E_like 20.8 78 0.0017 21.6 1.9 18 101-118 113-130 (210)
368 PRK10563 6-phosphogluconate ph 20.7 1.1E+02 0.0024 20.7 2.6 26 94-119 153-178 (221)
369 PF00484 Pro_CA: Carbonic anhy 20.6 2.4E+02 0.0053 18.0 4.4 34 79-117 38-71 (153)
370 PF07449 HyaE: Hydrogenase-1 e 20.5 75 0.0016 19.7 1.5 16 18-33 81-96 (107)
371 PLN02154 carbonic anhydrase 20.5 1.4E+02 0.003 22.1 3.1 34 81-119 151-184 (290)
372 cd00842 MPP_ASMase acid sphing 20.1 1E+02 0.0022 22.2 2.4 28 81-108 194-221 (296)
373 PLN00416 carbonate dehydratase 20.1 1.3E+02 0.0029 21.7 3.0 34 81-119 125-158 (258)
No 1
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=99.95 E-value=7.9e-29 Score=189.82 Aligned_cols=119 Identities=45% Similarity=0.813 Sum_probs=96.1
Q ss_pred CCCCCCCCCceEEEEEeCCCcccCCC--CcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHH
Q psy13951 11 PDSSRTYRRHSVLVIIHGESYSFGSG--NIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQW 88 (130)
Q Consensus 11 p~~~~~~~~~Pvvv~iHGGg~~~g~~--~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~ 88 (130)
|.......++|||||||||+|..|+. ..+....++...+++||++||||+++||...........+.++.|++.|++|
T Consensus 116 P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~W 195 (535)
T PF00135_consen 116 PSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKW 195 (535)
T ss_dssp ETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHH
T ss_pred ccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHH
Confidence 33334444899999999999999998 4555555777789999999999999999987653222489999999999999
Q ss_pred HHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhCCCCCCCCC
Q psy13951 89 IKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSPLLSPSYD 129 (130)
Q Consensus 89 l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~~~~~g~~~ 129 (130)
+++|+..||+||+||.|+|+||||.++..++++|..+|||.
T Consensus 196 V~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~ 236 (535)
T PF00135_consen 196 VQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFH 236 (535)
T ss_dssp HHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBS
T ss_pred HHhhhhhcccCCcceeeeeecccccccceeeeccccccccc
Confidence 99999999999999999999999999999999999999985
No 2
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=99.95 E-value=5.9e-28 Score=180.16 Aligned_cols=114 Identities=46% Similarity=0.786 Sum_probs=100.2
Q ss_pred CCCCceEEEEEeCCCcccCCCCc--chhHHHhhcCCeEEEeeccccccccCCCCCCC---CCCCCCccHHHHHHHHHHHH
Q psy13951 16 TYRRHSVLVIIHGESYSFGSGNI--YDGFVLASYANMVVVTFNFRLGILGFLRPGVG---SSTVTNFGIMDQVAALQWIK 90 (130)
Q Consensus 16 ~~~~~Pvvv~iHGGg~~~g~~~~--~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~---~~~~~~~~~~D~~~a~~~l~ 90 (130)
+.++.|||||||||+|..|+... |+...++++.+++||++||||+.+||+..... .....+.++.|++.|++|++
T Consensus 90 ~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~ 169 (491)
T COG2272 90 PAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVR 169 (491)
T ss_pred CCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHH
Confidence 55678999999999999998875 77777888767999999999999999765432 23334578999999999999
Q ss_pred HhhhhhCCCCCCeEEEEcChhHHHHHHHHhCCCCCCCCC
Q psy13951 91 DNIEHFGGDPTSVTLMGHGTGAASINFLMLSPLLSPSYD 129 (130)
Q Consensus 91 ~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~~~~~g~~~ 129 (130)
+|++.||+||+||.|+|+|||++.++.++..|..+|+|+
T Consensus 170 ~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~ 208 (491)
T COG2272 170 DNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFH 208 (491)
T ss_pred HHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHH
Confidence 999999999999999999999999999999999999884
No 3
>KOG1515|consensus
Probab=99.94 E-value=6.7e-27 Score=170.30 Aligned_cols=107 Identities=34% Similarity=0.524 Sum_probs=92.2
Q ss_pred CCCCCCCCCCCCC-CCceEEEEEeCCCcccCCCC--cchhHH--HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccH
Q psy13951 5 LPEALSPDSSRTY-RRHSVLVIIHGESYSFGSGN--IYDGFV--LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGI 79 (130)
Q Consensus 5 ~p~~~~p~~~~~~-~~~Pvvv~iHGGg~~~g~~~--~~~~~~--~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~ 79 (130)
++.++..+..... ++.|+|||+|||||+.++.. .|+.++ ++.+.+++|+++|||++ |+.++|.++
T Consensus 74 l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLA----------PEh~~Pa~y 143 (336)
T KOG1515|consen 74 LPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLA----------PEHPFPAAY 143 (336)
T ss_pred eEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccC----------CCCCCCccc
Confidence 3444444444444 78999999999999999754 567777 77899999999999999 899999999
Q ss_pred HHHHHHHHHHHHh-hhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 80 MDQVAALQWIKDN-IEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 80 ~D~~~a~~~l~~~-~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
+|++.|+.|+.++ ..+++.|++||+|+|+||||++|..+++.
T Consensus 144 ~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r 186 (336)
T KOG1515|consen 144 DDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQR 186 (336)
T ss_pred hHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHH
Confidence 9999999999998 88899999999999999999999999874
No 4
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.94 E-value=3.2e-26 Score=174.83 Aligned_cols=111 Identities=45% Similarity=0.803 Sum_probs=97.5
Q ss_pred CCCceEEEEEeCCCcccCCCCcchhHHHhhcCC-eEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhh
Q psy13951 17 YRRHSVLVIIHGESYSFGSGNIYDGFVLASYAN-MVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEH 95 (130)
Q Consensus 17 ~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g-~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~ 95 (130)
.+++|||||||||||..|+...+....++...+ ++||+++||++++||+.... .....+.++.|+..|++|+++++..
T Consensus 92 ~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~-~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 92 GNSLPVMVWIHGGGFMFGSGSLYPGDGLAREGDNVIVVSINYRLGVLGFLSTGD-IELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCCCEEEEEcCCccccCCCCCCChHHHHhcCCCEEEEEecccccccccccCCC-CCCCcchhHHHHHHHHHHHHHHHHH
Confidence 567899999999999999988765555666665 99999999999999987664 3567788999999999999999999
Q ss_pred hCCCCCCeEEEEcChhHHHHHHHHhCCCCCCCC
Q psy13951 96 FGGDPTSVTLMGHGTGAASINFLMLSPLLSPSY 128 (130)
Q Consensus 96 ~~~d~~ri~l~G~SaGg~~a~~~~~~~~~~g~~ 128 (130)
|++||+||.|+|+|+||+++..+++++..+++|
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf 203 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLSPDSKGLF 203 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhCcchhHHH
Confidence 999999999999999999999999988766665
No 5
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.93 E-value=6.3e-26 Score=164.57 Aligned_cols=100 Identities=27% Similarity=0.443 Sum_probs=90.5
Q ss_pred CCCCCceEEEEEeCCCcccCCCCcchhHH--HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHh
Q psy13951 15 RTYRRHSVLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDN 92 (130)
Q Consensus 15 ~~~~~~Pvvv~iHGGg~~~g~~~~~~~~~--~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~ 92 (130)
+...+.|+|||+|||||+.++...++..+ ++...|+.|+++|||++ |+.+++..++|+.++++|+.++
T Consensus 74 ~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrla----------Pe~~~p~~~~d~~~a~~~l~~~ 143 (312)
T COG0657 74 KAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLA----------PEHPFPAALEDAYAAYRWLRAN 143 (312)
T ss_pred CCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCC----------CCCCCCchHHHHHHHHHHHHhh
Confidence 44456899999999999999999885555 77889999999999999 8889999999999999999999
Q ss_pred hhhhCCCCCCeEEEEcChhHHHHHHHHhCCCC
Q psy13951 93 IEHFGGDPTSVTLMGHGTGAASINFLMLSPLL 124 (130)
Q Consensus 93 ~~~~~~d~~ri~l~G~SaGg~~a~~~~~~~~~ 124 (130)
..++++|++||+++|+||||++++.+++..+.
T Consensus 144 ~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~ 175 (312)
T COG0657 144 AAELGIDPSRIAVAGDSAGGHLALALALAARD 175 (312)
T ss_pred hHhhCCCccceEEEecCcccHHHHHHHHHHHh
Confidence 99999999999999999999999999875543
No 6
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.91 E-value=1.2e-24 Score=149.37 Aligned_cols=89 Identities=30% Similarity=0.484 Sum_probs=77.2
Q ss_pred EEEEeCCCcccCCCCcchhHH--HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCCC
Q psy13951 23 LVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDP 100 (130)
Q Consensus 23 vv~iHGGg~~~g~~~~~~~~~--~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~ 100 (130)
|||||||||+.++.......+ ++.+.|++|++++||++ |+..++.+++|+.++++|+.+++.++++|+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~----------p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~ 70 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA----------PEAPFPAALEDVKAAYRWLLKNADKLGIDP 70 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T----------TTSSTTHHHHHHHHHHHHHHHTHHHHTEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc----------ccccccccccccccceeeeccccccccccc
Confidence 799999999999998776555 66668999999999998 888999999999999999999999999999
Q ss_pred CCeEEEEcChhHHHHHHHHhC
Q psy13951 101 TSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~~ 121 (130)
+||+|+|+|+||++++.+++.
T Consensus 71 ~~i~l~G~SAGg~la~~~~~~ 91 (211)
T PF07859_consen 71 ERIVLIGDSAGGHLALSLALR 91 (211)
T ss_dssp EEEEEEEETHHHHHHHHHHHH
T ss_pred cceEEeecccccchhhhhhhh
Confidence 999999999999999999863
No 7
>PRK10162 acetyl esterase; Provisional
Probab=99.90 E-value=3.6e-23 Score=150.79 Aligned_cols=92 Identities=22% Similarity=0.364 Sum_probs=83.6
Q ss_pred CceEEEEEeCCCcccCCCCcchhHH--HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhh
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHF 96 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~--~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~ 96 (130)
+.|+|||+|||||..++.+.+...+ ++...|+.|+++|||++ ++.+++..++|+.++++|+.++..++
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrla----------pe~~~p~~~~D~~~a~~~l~~~~~~~ 149 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLS----------PEARFPQAIEEIVAVCCYFHQHAEDY 149 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCC----------CCCCCCCcHHHHHHHHHHHHHhHHHh
Confidence 4699999999999999988776655 66768999999999998 67778889999999999999999999
Q ss_pred CCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 97 GGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 97 ~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
++|++||+|+|+|+||++++.+++
T Consensus 150 ~~d~~~i~l~G~SaGG~la~~~a~ 173 (318)
T PRK10162 150 GINMSRIGFAGDSAGAMLALASAL 173 (318)
T ss_pred CCChhHEEEEEECHHHHHHHHHHH
Confidence 999999999999999999999886
No 8
>KOG1516|consensus
Probab=99.89 E-value=2.5e-23 Score=160.69 Aligned_cols=109 Identities=47% Similarity=0.814 Sum_probs=96.4
Q ss_pred ceEEEEEeCCCcccCCCCcc---hhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhh
Q psy13951 20 HSVLVIIHGESYSFGSGNIY---DGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHF 96 (130)
Q Consensus 20 ~Pvvv~iHGGg~~~g~~~~~---~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~ 96 (130)
.||+||||||+|..++...+ .........+++||+++|||+++||+.... ...+.+.++.|+..|++|+++++..|
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d-~~~~gN~gl~Dq~~AL~wv~~~I~~F 190 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGD-SAAPGNLGLFDQLLALRWVKDNIPSF 190 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCC-CCCCCcccHHHHHHHHHHHHHHHHhc
Confidence 89999999999999987533 333355667899999999999999988874 44489999999999999999999999
Q ss_pred CCCCCCeEEEEcChhHHHHHHHHhCCCCCCCCC
Q psy13951 97 GGDPTSVTLMGHGTGAASINFLMLSPLLSPSYD 129 (130)
Q Consensus 97 ~~d~~ri~l~G~SaGg~~a~~~~~~~~~~g~~~ 129 (130)
++||++|.|+|||+||.++..++++|..+++|.
T Consensus 191 GGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~ 223 (545)
T KOG1516|consen 191 GGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFH 223 (545)
T ss_pred CCCCCeEEEEeechhHHHHHHHhcCHhhHHHHH
Confidence 999999999999999999999999998888773
No 9
>KOG4389|consensus
Probab=99.87 E-value=4.5e-22 Score=148.27 Aligned_cols=110 Identities=41% Similarity=0.696 Sum_probs=102.7
Q ss_pred ceEEEEEeCCCcccCCCC--cchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhC
Q psy13951 20 HSVLVIIHGESYSFGSGN--IYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFG 97 (130)
Q Consensus 20 ~Pvvv~iHGGg~~~g~~~--~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~ 97 (130)
.-|+|||.||||..|+.. .|+...+++.+..+||++|||++++||.-....++.+++.++.|+..|++|+++|+..||
T Consensus 135 ~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFG 214 (601)
T KOG4389|consen 135 LTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFG 214 (601)
T ss_pred ceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHhC
Confidence 349999999999999886 577777999999999999999999999988777999999999999999999999999999
Q ss_pred CCCCCeEEEEcChhHHHHHHHHhCCCCCCCCC
Q psy13951 98 GDPTSVTLMGHGTGAASINFLMLSPLLSPSYD 129 (130)
Q Consensus 98 ~d~~ri~l~G~SaGg~~a~~~~~~~~~~g~~~ 129 (130)
+||+||.|+|.|||+..+.+.+++|..+|+|.
T Consensus 215 Gnp~~vTLFGESAGaASv~aHLlsP~S~glF~ 246 (601)
T KOG4389|consen 215 GNPSRVTLFGESAGAASVVAHLLSPGSRGLFH 246 (601)
T ss_pred CCcceEEEeccccchhhhhheecCCCchhhHH
Confidence 99999999999999999999999999999874
No 10
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.68 E-value=8.8e-17 Score=126.25 Aligned_cols=108 Identities=18% Similarity=0.190 Sum_probs=81.0
Q ss_pred CCCCCCCCCceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCC--CCCCCCccHHHHHHHHHH
Q psy13951 11 PDSSRTYRRHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVG--SSTVTNFGIMDQVAALQW 88 (130)
Q Consensus 11 p~~~~~~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~--~~~~~~~~~~D~~~a~~~ 88 (130)
|...++.+++|+|||+|||....-........+..+..|++|+.+||| ++.|++..... ....+...++|+.++++|
T Consensus 385 P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~R-GS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~ 463 (620)
T COG1506 385 PPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYR-GSTGYGREFADAIRGDWGGVDLEDLIAAVDA 463 (620)
T ss_pred CCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCC-CCCccHHHHHHhhhhccCCccHHHHHHHHHH
Confidence 445566677999999999986554433334444566689999999999 66776554332 234556678899999998
Q ss_pred HHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhCC
Q psy13951 89 IKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 89 l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
+.+.. .+|++||+|+|+|.||+|++++++..
T Consensus 464 l~~~~---~~d~~ri~i~G~SyGGymtl~~~~~~ 494 (620)
T COG1506 464 LVKLP---LVDPERIGITGGSYGGYMTLLAATKT 494 (620)
T ss_pred HHhCC---CcChHHeEEeccChHHHHHHHHHhcC
Confidence 86543 46999999999999999999998743
No 11
>KOG4388|consensus
Probab=99.64 E-value=6e-16 Score=117.95 Aligned_cols=92 Identities=16% Similarity=0.277 Sum_probs=83.8
Q ss_pred CceEEEEEeCCCcccCCCCcchhHH--HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhh
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHF 96 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~--~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~ 96 (130)
.+-+|+++|||||+..+...+.... ++...|+.|+++||.|+ |+.++|-.++++.-|+.|+.+|..-+
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLA----------PEaPFPRaleEv~fAYcW~inn~all 464 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLA----------PEAPFPRALEEVFFAYCWAINNCALL 464 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccC----------CCCCCCcHHHHHHHHHHHHhcCHHHh
Confidence 3459999999999998887766555 88889999999999999 99999999999999999999999999
Q ss_pred CCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 97 GGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 97 ~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
|-.-+||++.|+||||+++..+++
T Consensus 465 G~TgEriv~aGDSAGgNL~~~VaL 488 (880)
T KOG4388|consen 465 GSTGERIVLAGDSAGGNLCFTVAL 488 (880)
T ss_pred CcccceEEEeccCCCcceeehhHH
Confidence 999999999999999999988776
No 12
>KOG4627|consensus
Probab=99.63 E-value=8e-16 Score=104.40 Aligned_cols=96 Identities=18% Similarity=0.251 Sum_probs=76.7
Q ss_pred CCceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhh
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHF 96 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~ 96 (130)
...|+.||||||.|..|.+...-..+ -+.+.||.|++++|-+++ ........+.|....++|+.+...
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~---------q~htL~qt~~~~~~gv~filk~~~-- 133 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCP---------QVHTLEQTMTQFTHGVNFILKYTE-- 133 (270)
T ss_pred CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCc---------ccccHHHHHHHHHHHHHHHHHhcc--
Confidence 34589999999999999998776666 777889999999999974 233455667788888898877654
Q ss_pred CCCCCCeEEEEcChhHHHHHHHHh---CCCCCC
Q psy13951 97 GGDPTSVTLMGHGTGAASINFLML---SPLLSP 126 (130)
Q Consensus 97 ~~d~~ri~l~G~SaGg~~a~~~~~---~~~~~g 126 (130)
..++|.+.|||+|+|+++.+.+ +|+++|
T Consensus 134 --n~k~l~~gGHSaGAHLa~qav~R~r~prI~g 164 (270)
T KOG4627|consen 134 --NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWG 164 (270)
T ss_pred --cceeEEEcccchHHHHHHHHHHHhcCchHHH
Confidence 3678999999999999999876 555554
No 13
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=99.62 E-value=2.1e-15 Score=111.06 Aligned_cols=91 Identities=15% Similarity=0.284 Sum_probs=69.7
Q ss_pred CceEEEEEeCCCcccCCCCcchhHH---HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhh
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFV---LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEH 95 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~---~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~ 95 (130)
..|||||+|||||..+.....-... ...-....++.+||.+.+.. .....+|.|+.+..+.+++|.+..
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~~~------~~~~~yPtQL~qlv~~Y~~Lv~~~-- 192 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTSSD------EHGHKYPTQLRQLVATYDYLVESE-- 192 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccccc------cCCCcCchHHHHHHHHHHHHHhcc--
Confidence 4599999999999998877432222 11112568999999997311 136788999999999999998543
Q ss_pred hCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 96 FGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 96 ~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
..++|.|||+||||++++.+++
T Consensus 193 ---G~~nI~LmGDSAGGnL~Ls~Lq 214 (374)
T PF10340_consen 193 ---GNKNIILMGDSAGGNLALSFLQ 214 (374)
T ss_pred ---CCCeEEEEecCccHHHHHHHHH
Confidence 2479999999999999999876
No 14
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.49 E-value=2.4e-13 Score=93.86 Aligned_cols=101 Identities=12% Similarity=0.026 Sum_probs=65.0
Q ss_pred CCceEEEEEeCCCcccCCCC-cchhHHHhhcCCeEEEeecccccccc--CCC-CCCCCCCCCCccHHHHHHHHHHHHHhh
Q psy13951 18 RRHSVLVIIHGESYSFGSGN-IYDGFVLASYANMVVVTFNFRLGILG--FLR-PGVGSSTVTNFGIMDQVAALQWIKDNI 93 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~-~~~~~~~~~~~g~~vv~~~yrl~~~~--~~~-~~~~~~~~~~~~~~D~~~a~~~l~~~~ 93 (130)
+++|+||++||++....... .+....++.+.|++|+.++++-.... +.. ..............|+...++++.+
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-- 88 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKA-- 88 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHH--
Confidence 46799999999876433221 11223367778999999999842110 000 0000111223345566667776655
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
++++|++||+|+|+|+||.+++.++..
T Consensus 89 -~~~id~~~i~l~G~S~Gg~~a~~~a~~ 115 (212)
T TIGR01840 89 -NYSIDPNRVYVTGLSAGGGMTAVLGCT 115 (212)
T ss_pred -hcCcChhheEEEEECHHHHHHHHHHHh
Confidence 567899999999999999999998863
No 15
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.46 E-value=2.4e-13 Score=94.45 Aligned_cols=100 Identities=18% Similarity=0.136 Sum_probs=61.0
Q ss_pred CCceEEEEEeCCCcccCCCCcchh-HHHhhcCCeEEEeeccccc--cccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhh
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIYDG-FVLASYANMVVVTFNFRLG--ILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIE 94 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~~~-~~~~~~~g~~vv~~~yrl~--~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~ 94 (130)
.+.|+||++||.+........... ..++.++|++|+.|+-... ...+.................+.+.++++ ..
T Consensus 14 ~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v---~~ 90 (220)
T PF10503_consen 14 GPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYV---AA 90 (220)
T ss_pred CCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhH---hh
Confidence 467999999996543322111222 2388999999999985431 12222111111111111122233444444 45
Q ss_pred hhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 95 HFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 95 ~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
++++|++||+++|.|+||.|+..++.
T Consensus 91 ~~~iD~~RVyv~G~S~Gg~ma~~la~ 116 (220)
T PF10503_consen 91 RYNIDPSRVYVTGLSNGGMMANVLAC 116 (220)
T ss_pred hcccCCCceeeEEECHHHHHHHHHHH
Confidence 78999999999999999999999886
No 16
>PLN00021 chlorophyllase
Probab=99.41 E-value=1.7e-12 Score=94.60 Aligned_cols=93 Identities=19% Similarity=0.289 Sum_probs=65.8
Q ss_pred CCCCceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhh
Q psy13951 16 TYRRHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIE 94 (130)
Q Consensus 16 ~~~~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~ 94 (130)
..++.|+|||+||+++. ...+.... ..++.|++|+++|++.- . +. .....++|..++++|+.+...
T Consensus 48 ~~g~~PvVv~lHG~~~~---~~~y~~l~~~Las~G~~VvapD~~g~----~-----~~-~~~~~i~d~~~~~~~l~~~l~ 114 (313)
T PLN00021 48 EAGTYPVLLFLHGYLLY---NSFYSQLLQHIASHGFIVVAPQLYTL----A-----GP-DGTDEIKDAAAVINWLSSGLA 114 (313)
T ss_pred CCCCCCEEEEECCCCCC---cccHHHHHHHHHhCCCEEEEecCCCc----C-----CC-CchhhHHHHHHHHHHHHhhhh
Confidence 34678999999997643 23344444 33556999999997631 0 11 123356788888999987543
Q ss_pred h-----hCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 95 H-----FGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 95 ~-----~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
. ...|++|++++|||+||.+++.++..
T Consensus 115 ~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~ 146 (313)
T PLN00021 115 AVLPEGVRPDLSKLALAGHSRGGKTAFALALG 146 (313)
T ss_pred hhcccccccChhheEEEEECcchHHHHHHHhh
Confidence 3 34678999999999999999999864
No 17
>PRK10115 protease 2; Provisional
Probab=99.38 E-value=1.5e-12 Score=103.51 Aligned_cols=101 Identities=13% Similarity=-0.031 Sum_probs=72.3
Q ss_pred CCCceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCC--CCCCCCccHHHHHHHHHHHHHhhh
Q psy13951 17 YRRHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVG--SSTVTNFGIMDQVAALQWIKDNIE 94 (130)
Q Consensus 17 ~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~--~~~~~~~~~~D~~~a~~~l~~~~~ 94 (130)
.++.|+||++|||.............+....+|++|+.+|+| ++.+++..... ........++|+.++++||.++.
T Consensus 442 ~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~R-Gs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g- 519 (686)
T PRK10115 442 KGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVR-GGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLG- 519 (686)
T ss_pred CCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcC-CCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcC-
Confidence 346699999999765554443323333334479999999999 55566543322 11223357889999999998653
Q ss_pred hhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 95 HFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 95 ~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
-+|++||+++|.|+||.|+..++..
T Consensus 520 --~~d~~rl~i~G~S~GG~l~~~~~~~ 544 (686)
T PRK10115 520 --YGSPSLCYGMGGSAGGMLMGVAINQ 544 (686)
T ss_pred --CCChHHeEEEEECHHHHHHHHHHhc
Confidence 3699999999999999999988763
No 18
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.34 E-value=4.9e-12 Score=89.38 Aligned_cols=104 Identities=15% Similarity=0.241 Sum_probs=71.2
Q ss_pred CCCCCCCCCCCCCCceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHH
Q psy13951 6 PEALSPDSSRTYRRHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVA 84 (130)
Q Consensus 6 p~~~~p~~~~~~~~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~ 84 (130)
|..+....++....+||+||+|| |. -....|..+. -.+..||+||.+++..- ........+++..+
T Consensus 3 p~~l~v~~P~~~g~yPVv~f~~G--~~-~~~s~Ys~ll~hvAShGyIVV~~d~~~~----------~~~~~~~~~~~~~~ 69 (259)
T PF12740_consen 3 PKPLLVYYPSSAGTYPVVLFLHG--FL-LINSWYSQLLEHVASHGYIVVAPDLYSI----------GGPDDTDEVASAAE 69 (259)
T ss_pred CCCeEEEecCCCCCcCEEEEeCC--cC-CCHHHHHHHHHHHHhCceEEEEeccccc----------CCCCcchhHHHHHH
Confidence 33333344456778999999999 32 2222344444 45668999999994421 11223334678889
Q ss_pred HHHHHHHhhhhh-----CCCCCCeEEEEcChhHHHHHHHHhCC
Q psy13951 85 ALQWIKDNIEHF-----GGDPTSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 85 a~~~l~~~~~~~-----~~d~~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
.++|+.+..... ..|-+||+|+|||.||.++..+++..
T Consensus 70 vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~ 112 (259)
T PF12740_consen 70 VIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGN 112 (259)
T ss_pred HHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhh
Confidence 999998755443 36899999999999999999888754
No 19
>KOG2100|consensus
Probab=99.32 E-value=5.9e-12 Score=100.82 Aligned_cols=108 Identities=19% Similarity=0.147 Sum_probs=81.7
Q ss_pred CCCCCCCCCceEEEEEeCCCcccCCCCc--chh-HHHhhcCCeEEEeeccccccccCCCCCCC--CCCCCCccHHHHHHH
Q psy13951 11 PDSSRTYRRHSVLVIIHGESYSFGSGNI--YDG-FVLASYANMVVVTFNFRLGILGFLRPGVG--SSTVTNFGIMDQVAA 85 (130)
Q Consensus 11 p~~~~~~~~~Pvvv~iHGGg~~~g~~~~--~~~-~~~~~~~g~~vv~~~yrl~~~~~~~~~~~--~~~~~~~~~~D~~~a 85 (130)
|+..++.+++|++|.+|||......... .+. ..++...|++|+.+|+| ++.+++..... +...+...++|+..+
T Consensus 517 P~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~R-Gs~~~G~~~~~~~~~~lG~~ev~D~~~~ 595 (755)
T KOG2100|consen 517 PPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGR-GSGGYGWDFRSALPRNLGDVEVKDQIEA 595 (755)
T ss_pred CCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCC-CcCCcchhHHHHhhhhcCCcchHHHHHH
Confidence 4455666799999999999863322221 122 22677789999999999 55566555422 556667788999999
Q ss_pred HHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhCC
Q psy13951 86 LQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 86 ~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
++++.++. -+|.+||+|+|+|.||+|++.++.++
T Consensus 596 ~~~~~~~~---~iD~~ri~i~GwSyGGy~t~~~l~~~ 629 (755)
T KOG2100|consen 596 VKKVLKLP---FIDRSRVAIWGWSYGGYLTLKLLESD 629 (755)
T ss_pred HHHHHhcc---cccHHHeEEeccChHHHHHHHHhhhC
Confidence 99888765 58999999999999999999998765
No 20
>PRK10566 esterase; Provisional
Probab=99.28 E-value=4.4e-11 Score=83.87 Aligned_cols=96 Identities=13% Similarity=0.021 Sum_probs=60.8
Q ss_pred CCCceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCC-------CccHHHHHHHHHH
Q psy13951 17 YRRHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVT-------NFGIMDQVAALQW 88 (130)
Q Consensus 17 ~~~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~-------~~~~~D~~~a~~~ 88 (130)
+++.|+||++||.+ ++...+.... ...+.|+.|+.+|||.....+. ..+.... ...++|+.++++|
T Consensus 24 ~~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (249)
T PRK10566 24 DTPLPTVFFYHGFT---SSKLVYSYFAVALAQAGFRVIMPDAPMHGARFS---GDEARRLNHFWQILLQNMQEFPTLRAA 97 (249)
T ss_pred CCCCCEEEEeCCCC---cccchHHHHHHHHHhCCCEEEEecCCcccccCC---CccccchhhHHHHHHHHHHHHHHHHHH
Confidence 34679999999953 3333344343 4455799999999994211110 0011111 1234566666676
Q ss_pred HHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 89 IKDNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 89 l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
+.+. ..+|++||+++|+|+||.+++.++..
T Consensus 98 l~~~---~~~~~~~i~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 98 IREE---GWLLDDRLAVGGASMGGMTALGIMAR 127 (249)
T ss_pred HHhc---CCcCccceeEEeecccHHHHHHHHHh
Confidence 6542 23688999999999999999988753
No 21
>PRK13604 luxD acyl transferase; Provisional
Probab=99.27 E-value=5.1e-11 Score=86.29 Aligned_cols=95 Identities=9% Similarity=0.171 Sum_probs=63.9
Q ss_pred CCCCceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCC-CCCCCCccHHHHHHHHHHHHHhh
Q psy13951 16 TYRRHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVG-SSTVTNFGIMDQVAALQWIKDNI 93 (130)
Q Consensus 16 ~~~~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~-~~~~~~~~~~D~~~a~~~l~~~~ 93 (130)
..++.++||+.|| | .+.+..+..++ ...++|+.|+.+|+|-. .+.++.. ..........|+.++++|+++.
T Consensus 33 ~~~~~~~vIi~HG--f-~~~~~~~~~~A~~La~~G~~vLrfD~rg~---~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~- 105 (307)
T PRK13604 33 SPKKNNTILIASG--F-ARRMDHFAGLAEYLSSNGFHVIRYDSLHH---VGLSSGTIDEFTMSIGKNSLLTVVDWLNTR- 105 (307)
T ss_pred CCCCCCEEEEeCC--C-CCChHHHHHHHHHHHHCCCEEEEecCCCC---CCCCCCccccCcccccHHHHHHHHHHHHhc-
Confidence 4456789999999 2 22223344444 55678999999998732 0111111 2223344688999999999864
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHHhCC
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
+.++|+|.|||+||.++..++...
T Consensus 106 -----~~~~I~LiG~SmGgava~~~A~~~ 129 (307)
T PRK13604 106 -----GINNLGLIAASLSARIAYEVINEI 129 (307)
T ss_pred -----CCCceEEEEECHHHHHHHHHhcCC
Confidence 346899999999999987766543
No 22
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.25 E-value=7.2e-11 Score=84.22 Aligned_cols=100 Identities=19% Similarity=0.135 Sum_probs=66.7
Q ss_pred ceEEEEEeCCCcccCCCCcchh-HHHhhcCCeEEEee-cccccc--ccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhh
Q psy13951 20 HSVLVIIHGESYSFGSGNIYDG-FVLASYANMVVVTF-NFRLGI--LGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEH 95 (130)
Q Consensus 20 ~Pvvv~iHGGg~~~g~~~~~~~-~~~~~~~g~~vv~~-~yrl~~--~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~ 95 (130)
.|+||++||++-.......-.. -.+++++|+.|+.+ .|.... .+.+.... .......+.|+-...+.+.+...+
T Consensus 61 apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~--p~~~~~g~ddVgflr~lva~l~~~ 138 (312)
T COG3509 61 APLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFG--PADRRRGVDDVGFLRALVAKLVNE 138 (312)
T ss_pred CCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCC--cccccCCccHHHHHHHHHHHHHHh
Confidence 3999999996543222222223 33889999999999 444221 11111111 112233466777666667777889
Q ss_pred hCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 96 FGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 96 ~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
+++|++||++.|-|.||.|+..++..
T Consensus 139 ~gidp~RVyvtGlS~GG~Ma~~lac~ 164 (312)
T COG3509 139 YGIDPARVYVTGLSNGGRMANRLACE 164 (312)
T ss_pred cCcCcceEEEEeeCcHHHHHHHHHhc
Confidence 99999999999999999999998864
No 23
>KOG2281|consensus
Probab=99.24 E-value=1.9e-11 Score=94.52 Aligned_cols=110 Identities=17% Similarity=0.089 Sum_probs=81.5
Q ss_pred CCCCCCCCCCceEEEEEeCCCcccCCCCc-----chhHHHhhcCCeEEEeeccccccccCCCCCCC-CCCCCCccHHHHH
Q psy13951 10 SPDSSRTYRRHSVLVIIHGESYSFGSGNI-----YDGFVLASYANMVVVTFNFRLGILGFLRPGVG-SSTVTNFGIMDQV 83 (130)
Q Consensus 10 ~p~~~~~~~~~Pvvv~iHGGg~~~g~~~~-----~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~-~~~~~~~~~~D~~ 83 (130)
.|...++.+|+|+|+++.||.-+.-..+. +-+.+..+.+|+.|+.+|-|-+.-........ ....+...++|+.
T Consensus 632 KPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQV 711 (867)
T KOG2281|consen 632 KPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQV 711 (867)
T ss_pred ccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhH
Confidence 35566778899999999999987765553 33444555689999999999432111111111 3455666789999
Q ss_pred HHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 84 AALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 84 ~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.+++||.+... -+|.+||+|-|+|.||+|+++.++.
T Consensus 712 eglq~Laeq~g--fidmdrV~vhGWSYGGYLSlm~L~~ 747 (867)
T KOG2281|consen 712 EGLQMLAEQTG--FIDMDRVGVHGWSYGGYLSLMGLAQ 747 (867)
T ss_pred HHHHHHHHhcC--cccchheeEeccccccHHHHHHhhc
Confidence 99999987654 3799999999999999999998764
No 24
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.23 E-value=8.6e-11 Score=83.94 Aligned_cols=93 Identities=15% Similarity=0.093 Sum_probs=60.1
Q ss_pred CceEEEEEeCCCcccC-CCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCC-CCCCCCccHHHHHHHHHHHHHhhhh
Q psy13951 19 RHSVLVIIHGESYSFG-SGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVG-SSTVTNFGIMDQVAALQWIKDNIEH 95 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g-~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~-~~~~~~~~~~D~~~a~~~l~~~~~~ 95 (130)
++|+||++||-+.... +...+.... ..++.|+.|+.+||| |++.+... ....+....+|+..+++|+++.
T Consensus 24 ~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~----G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~--- 96 (266)
T TIGR03101 24 PRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLY----GCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ--- 96 (266)
T ss_pred CceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCC----CCCCCCCccccCCHHHHHHHHHHHHHHHHhc---
Confidence 4689999999432111 112222222 334579999999999 33333221 1223334467888888888753
Q ss_pred hCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 96 FGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 96 ~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
+.++|+|+|+|+||.+++.++..
T Consensus 97 ---~~~~v~LvG~SmGG~vAl~~A~~ 119 (266)
T TIGR03101 97 ---GHPPVTLWGLRLGALLALDAANP 119 (266)
T ss_pred ---CCCCEEEEEECHHHHHHHHHHHh
Confidence 14689999999999999988754
No 25
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.20 E-value=9.1e-11 Score=82.57 Aligned_cols=96 Identities=16% Similarity=0.326 Sum_probs=68.3
Q ss_pred CCCCCCCceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHH
Q psy13951 13 SSRTYRRHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKD 91 (130)
Q Consensus 13 ~~~~~~~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~ 91 (130)
.+.....+|||+|+|| |... ...|.... ..+..|++|++++--.. ........+++...+++|+.+
T Consensus 39 tP~~~G~yPVilF~HG--~~l~-ns~Ys~lL~HIASHGfIVVAPQl~~~----------~~p~~~~Ei~~aa~V~~WL~~ 105 (307)
T PF07224_consen 39 TPSEAGTYPVILFLHG--FNLY-NSFYSQLLAHIASHGFIVVAPQLYTL----------FPPDGQDEIKSAASVINWLPE 105 (307)
T ss_pred cCCcCCCccEEEEeec--hhhh-hHHHHHHHHHHhhcCeEEEechhhcc----------cCCCchHHHHHHHHHHHHHHh
Confidence 4456678999999999 4332 22333333 55668999999986532 112334456777889999987
Q ss_pred hhhhh-----CCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 92 NIEHF-----GGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 92 ~~~~~-----~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
....+ ..+.++++++|||-||..|..+|+.
T Consensus 106 gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg 140 (307)
T PF07224_consen 106 GLQHVLPENVEANLSKLALSGHSRGGKTAFALALG 140 (307)
T ss_pred hhhhhCCCCcccccceEEEeecCCccHHHHHHHhc
Confidence 75443 3578999999999999999999874
No 26
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.16 E-value=2.9e-11 Score=83.27 Aligned_cols=75 Identities=20% Similarity=0.198 Sum_probs=52.8
Q ss_pred HHHhhcCCeEEEeeccccccccCCCCCCC--CCCCCCccHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 42 FVLASYANMVVVTFNFRLGILGFLRPGVG--SSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 42 ~~~~~~~g~~vv~~~yrl~~~~~~~~~~~--~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
..+.+++|++|+.+|||.+ .++...... ........++|+.++++|+.++. .+|++||+|+|+|+||++++.++
T Consensus 7 ~~~la~~Gy~v~~~~~rGs-~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~---~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 7 AQLLASQGYAVLVPNYRGS-GGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQY---YIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp HHHHHTTT-EEEEEE-TTS-SSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTT---SEEEEEEEEEEETHHHHHHHHHH
T ss_pred HHHHHhCCEEEEEEcCCCC-CccchhHHHhhhccccccchhhHHHHHHHHhccc---cccceeEEEEcccccccccchhh
Confidence 3466678999999999953 333221111 22333456778888888886643 67999999999999999999998
Q ss_pred h
Q psy13951 120 L 120 (130)
Q Consensus 120 ~ 120 (130)
.
T Consensus 83 ~ 83 (213)
T PF00326_consen 83 T 83 (213)
T ss_dssp H
T ss_pred c
Confidence 8
No 27
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.13 E-value=9.1e-10 Score=78.86 Aligned_cols=102 Identities=17% Similarity=0.095 Sum_probs=54.6
Q ss_pred CCceEEEEEeCCCcccCCCCcchhH-HHhhcCCeEEEeeccccccccCCCCC--------------CC-CCCCCCccHHH
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIYDGF-VLASYANMVVVTFNFRLGILGFLRPG--------------VG-SSTVTNFGIMD 81 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~~~~-~~~~~~g~~vv~~~yrl~~~~~~~~~--------------~~-~~~~~~~~~~D 81 (130)
++.|+|+++||.+-........... .++++.|++|+.+|+... +...+. .+ ...+......+
T Consensus 40 ~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~--g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~ 117 (275)
T TIGR02821 40 GPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPR--GTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRM 117 (275)
T ss_pred CCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCC--cCCCCCCcccccccCCccccccCCcCcccccchH
Confidence 4679999999965222111111112 266677999999998311 110000 00 00000000111
Q ss_pred HHHHHHHHHHhh-hhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 82 QVAALQWIKDNI-EHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 82 ~~~a~~~l~~~~-~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.....+.+.... ..+++|++|++++|+|+||++++.++..
T Consensus 118 ~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~ 158 (275)
T TIGR02821 118 YSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALK 158 (275)
T ss_pred HHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHh
Confidence 111122222222 2367889999999999999999999874
No 28
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.11 E-value=9.2e-10 Score=80.39 Aligned_cols=94 Identities=13% Similarity=0.171 Sum_probs=58.9
Q ss_pred CceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCC--CCCCCccHHHHHHHHHHHHHhhhh
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGS--STVTNFGIMDQVAALQWIKDNIEH 95 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~--~~~~~~~~~D~~~a~~~l~~~~~~ 95 (130)
..++||++||.+- .....+.... ...+.|+.|+.+|+| |++.+.... ........+|+.++++++.....
T Consensus 58 ~~~~VvllHG~~~--~~~~~~~~~~~~L~~~Gy~V~~~D~r----GhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~- 130 (330)
T PLN02298 58 PRALIFMVHGYGN--DISWTFQSTAIFLAQMGFACFALDLE----GHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREE- 130 (330)
T ss_pred CceEEEEEcCCCC--CcceehhHHHHHHHhCCCEEEEecCC----CCCCCCCccccCCCHHHHHHHHHHHHHHHHhccc-
Confidence 4689999999531 1111222333 334579999999999 333332211 11233446677778887764321
Q ss_pred hCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 96 FGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 96 ~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.+..+++|+|||+||.+++.++..
T Consensus 131 --~~~~~i~l~GhSmGG~ia~~~a~~ 154 (330)
T PLN02298 131 --FQGLPRFLYGESMGGAICLLIHLA 154 (330)
T ss_pred --CCCCCEEEEEecchhHHHHHHHhc
Confidence 233579999999999999988763
No 29
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.11 E-value=8.4e-10 Score=70.98 Aligned_cols=80 Identities=25% Similarity=0.332 Sum_probs=54.2
Q ss_pred EEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCCC
Q psy13951 22 VLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDP 100 (130)
Q Consensus 22 vvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~ 100 (130)
+||++||++. +...+.... .+++.|+.|+.++||.. ... ....+..++++++.+ ... |+
T Consensus 1 ~vv~~HG~~~---~~~~~~~~~~~l~~~G~~v~~~~~~~~----------~~~---~~~~~~~~~~~~~~~---~~~-~~ 60 (145)
T PF12695_consen 1 VVVLLHGWGG---SRRDYQPLAEALAEQGYAVVAFDYPGH----------GDS---DGADAVERVLADIRA---GYP-DP 60 (145)
T ss_dssp EEEEECTTTT---TTHHHHHHHHHHHHTTEEEEEESCTTS----------TTS---HHSHHHHHHHHHHHH---HHC-TC
T ss_pred CEEEECCCCC---CHHHHHHHHHHHHHCCCEEEEEecCCC----------Ccc---chhHHHHHHHHHHHh---hcC-CC
Confidence 5899999654 333344444 44556999999999953 111 222355555665542 222 78
Q ss_pred CCeEEEEcChhHHHHHHHHhC
Q psy13951 101 TSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~~ 121 (130)
++|+++|+|+||.+++.++..
T Consensus 61 ~~i~l~G~S~Gg~~a~~~~~~ 81 (145)
T PF12695_consen 61 DRIILIGHSMGGAIAANLAAR 81 (145)
T ss_dssp CEEEEEEETHHHHHHHHHHHH
T ss_pred CcEEEEEEccCcHHHHHHhhh
Confidence 999999999999999998864
No 30
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.05 E-value=1.8e-09 Score=79.61 Aligned_cols=94 Identities=17% Similarity=0.157 Sum_probs=55.7
Q ss_pred CCceEEEEEeCCCcccCCCCc-chhHH-HhhcCCeEEEeeccccccccCCCCCCCCC--CCCCccHHHHHHHHHHHHHhh
Q psy13951 18 RRHSVLVIIHGESYSFGSGNI-YDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSS--TVTNFGIMDQVAALQWIKDNI 93 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~-~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~--~~~~~~~~D~~~a~~~l~~~~ 93 (130)
++.|+||++||.+. +... +.... ..++.|+.|+.+|+| |++.+..... .......+|+.+.++++...
T Consensus 85 ~~~~~iv~lHG~~~---~~~~~~~~~~~~l~~~g~~v~~~D~~----G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~- 156 (349)
T PLN02385 85 RPKAAVCFCHGYGD---TCTFFFEGIARKIASSGYGVFAMDYP----GFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGN- 156 (349)
T ss_pred CCCeEEEEECCCCC---ccchHHHHHHHHHHhCCCEEEEecCC----CCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhc-
Confidence 35689999999432 2222 23333 334569999999999 3333322111 12222344555555544321
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
...+..+++|+|||+||.+++.++..
T Consensus 157 --~~~~~~~~~LvGhSmGG~val~~a~~ 182 (349)
T PLN02385 157 --PEFRGLPSFLFGQSMGGAVALKVHLK 182 (349)
T ss_pred --cccCCCCEEEEEeccchHHHHHHHHh
Confidence 12235689999999999999988763
No 31
>PRK10985 putative hydrolase; Provisional
Probab=99.04 E-value=2e-09 Score=78.75 Aligned_cols=92 Identities=20% Similarity=0.265 Sum_probs=58.4
Q ss_pred CCceEEEEEeCCCcccCCCCcc-hhHH-HhhcCCeEEEeeccccccccCCCCCCC-CCCCCCccHHHHHHHHHHHHHhhh
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIY-DGFV-LASYANMVVVTFNFRLGILGFLRPGVG-SSTVTNFGIMDQVAALQWIKDNIE 94 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~-~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~-~~~~~~~~~~D~~~a~~~l~~~~~ 94 (130)
.+.|+||++||.+ ......+ .... .+.+.|+.|+.+|||- +...... +........+|+..+++++++..
T Consensus 56 ~~~p~vll~HG~~--g~~~~~~~~~~~~~l~~~G~~v~~~d~rG----~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~- 128 (324)
T PRK10985 56 RHKPRLVLFHGLE--GSFNSPYAHGLLEAAQKRGWLGVVMHFRG----CSGEPNRLHRIYHSGETEDARFFLRWLQREF- 128 (324)
T ss_pred CCCCEEEEeCCCC--CCCcCHHHHHHHHHHHHCCCEEEEEeCCC----CCCCccCCcceECCCchHHHHHHHHHHHHhC-
Confidence 3468999999932 1112212 2222 4556899999999993 2222111 11112234689989999998643
Q ss_pred hhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 95 HFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 95 ~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+ .++++++|||+||.+++.++.
T Consensus 129 --~--~~~~~~vG~S~GG~i~~~~~~ 150 (324)
T PRK10985 129 --G--HVPTAAVGYSLGGNMLACLLA 150 (324)
T ss_pred --C--CCCEEEEEecchHHHHHHHHH
Confidence 2 367999999999998776654
No 32
>PLN02442 S-formylglutathione hydrolase
Probab=99.04 E-value=2.2e-09 Score=77.25 Aligned_cols=103 Identities=17% Similarity=0.188 Sum_probs=55.8
Q ss_pred CCCCceEEEEEeCCCcccCCCCcchhH-HHhhcCCeEEEeeccccccc-----------c----CCCCCCCCCCCCCccH
Q psy13951 16 TYRRHSVLVIIHGESYSFGSGNIYDGF-VLASYANMVVVTFNFRLGIL-----------G----FLRPGVGSSTVTNFGI 79 (130)
Q Consensus 16 ~~~~~Pvvv~iHGGg~~~g~~~~~~~~-~~~~~~g~~vv~~~yrl~~~-----------~----~~~~~~~~~~~~~~~~ 79 (130)
+.+++|+|+++||.+............ .+....|++|+.+|...... + ++....... ...+..
T Consensus 43 ~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 121 (283)
T PLN02442 43 DSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEK-WKNWRM 121 (283)
T ss_pred cCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCC-Ccccch
Confidence 456899999999954322111111112 25566799999998643110 0 000000000 000111
Q ss_pred HH-H-HHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 80 MD-Q-VAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 80 ~D-~-~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.+ + ....+++.+.... +|++|++|+|+|+||++++.++..
T Consensus 122 ~~~~~~~l~~~i~~~~~~--~~~~~~~i~G~S~GG~~a~~~a~~ 163 (283)
T PLN02442 122 YDYVVKELPKLLSDNFDQ--LDTSRASIFGHSMGGHGALTIYLK 163 (283)
T ss_pred hhhHHHHHHHHHHHHHHh--cCCCceEEEEEChhHHHHHHHHHh
Confidence 12 1 2233444443333 478999999999999999998874
No 33
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.04 E-value=1.2e-09 Score=78.25 Aligned_cols=101 Identities=10% Similarity=0.130 Sum_probs=59.3
Q ss_pred CCCCCCCCCc-eEEEEEeCCCcccCCCCcc--h---hHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHH
Q psy13951 11 PDSSRTYRRH-SVLVIIHGESYSFGSGNIY--D---GFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQV 83 (130)
Q Consensus 11 p~~~~~~~~~-Pvvv~iHGGg~~~g~~~~~--~---~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~ 83 (130)
|...++++++ |+++|+||+|-........ . ... ..-+-+|-|++|.|.-- +.. .+......+....
T Consensus 181 Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~i----f~d---~e~~t~~~l~~~i 253 (387)
T COG4099 181 PKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPI----FAD---SEEKTLLYLIEKI 253 (387)
T ss_pred ccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccc----ccc---cccccchhHHHHH
Confidence 4444556676 9999999987644322211 0 001 11233467777777621 000 1112222222333
Q ss_pred HHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 84 AALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 84 ~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+.++- ..++.+++|.+||++.|.|.||.++..++.
T Consensus 254 dli~~--vlas~ynID~sRIYviGlSrG~~gt~al~~ 288 (387)
T COG4099 254 DLILE--VLASTYNIDRSRIYVIGLSRGGFGTWALAE 288 (387)
T ss_pred HHHHH--HHhhccCcccceEEEEeecCcchhhHHHHH
Confidence 33331 345789999999999999999999998876
No 34
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.03 E-value=2.7e-09 Score=76.37 Aligned_cols=92 Identities=16% Similarity=0.159 Sum_probs=58.2
Q ss_pred eEEEEEeCCC-cccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCC
Q psy13951 21 SVLVIIHGES-YSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGG 98 (130)
Q Consensus 21 Pvvv~iHGGg-~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~ 98 (130)
+.||++|||. +..++...+.... ..++.|+.|+.+|+| |++.+... ........+|+.++++++++...
T Consensus 27 ~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~----G~G~S~~~-~~~~~~~~~d~~~~~~~l~~~~~---- 97 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYR----GMGDSEGE-NLGFEGIDADIAAAIDAFREAAP---- 97 (274)
T ss_pred CeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCC----CCCCCCCC-CCCHHHHHHHHHHHHHHHHhhCC----
Confidence 4566666643 4445544333333 445579999999999 33333221 11223345688888888876421
Q ss_pred CCCCeEEEEcChhHHHHHHHHhC
Q psy13951 99 DPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 99 d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
..++|+++|||+||.+++.++..
T Consensus 98 g~~~i~l~G~S~Gg~~a~~~a~~ 120 (274)
T TIGR03100 98 HLRRIVAWGLCDAASAALLYAPA 120 (274)
T ss_pred CCCcEEEEEECHHHHHHHHHhhh
Confidence 23689999999999999888754
No 35
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.00 E-value=3.1e-09 Score=76.29 Aligned_cols=89 Identities=18% Similarity=0.248 Sum_probs=53.8
Q ss_pred CCCceEEEEEeCCCcccCCCCcch-hHH--HhhcCCeEEEeeccccccccCCCCCCCCCCCCCcc---H----HHHHHHH
Q psy13951 17 YRRHSVLVIIHGESYSFGSGNIYD-GFV--LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFG---I----MDQVAAL 86 (130)
Q Consensus 17 ~~~~Pvvv~iHGGg~~~g~~~~~~-~~~--~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~---~----~D~~~a~ 86 (130)
+.+.|++|+||| |.......+. .+. +..+.++.|+++|++... ....+.. + +++.+.+
T Consensus 33 ~~~~p~vilIHG--~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~----------~~~y~~a~~~~~~v~~~la~~l 100 (275)
T cd00707 33 NPSRPTRFIIHG--WTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGA----------NPNYPQAVNNTRVVGAELAKFL 100 (275)
T ss_pred CCCCCcEEEEcC--CCCCCCCcHHHHHHHHHHhcCCCEEEEEECcccc----------ccChHHHHHhHHHHHHHHHHHH
Confidence 345689999999 3322212222 222 344568999999998431 1111111 1 2333334
Q ss_pred HHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 87 QWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 87 ~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+++. ...+.+.++|.++|||+||+++..++.
T Consensus 101 ~~L~---~~~g~~~~~i~lIGhSlGa~vAg~~a~ 131 (275)
T cd00707 101 DFLV---DNTGLSLENVHLIGHSLGAHVAGFAGK 131 (275)
T ss_pred HHHH---HhcCCChHHEEEEEecHHHHHHHHHHH
Confidence 4443 334567889999999999999999886
No 36
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.96 E-value=4.8e-09 Score=73.38 Aligned_cols=89 Identities=16% Similarity=0.141 Sum_probs=51.5
Q ss_pred CCCceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhh
Q psy13951 17 YRRHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHF 96 (130)
Q Consensus 17 ~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~ 96 (130)
....|.||++||.+ ++...+......-..++.|+.+|.|- ++.+............+|+.+.++ .+
T Consensus 13 ~~~~~~iv~lhG~~---~~~~~~~~~~~~l~~~~~vi~~D~~G----~G~s~~~~~~~~~~~~~d~~~~l~-------~l 78 (255)
T PRK10673 13 PHNNSPIVLVHGLF---GSLDNLGVLARDLVNDHDIIQVDMRN----HGLSPRDPVMNYPAMAQDLLDTLD-------AL 78 (255)
T ss_pred CCCCCCEEEECCCC---CchhHHHHHHHHHhhCCeEEEECCCC----CCCCCCCCCCCHHHHHHHHHHHHH-------Hc
Confidence 33458899999942 33334444442223579999999993 333322111111212223333222 22
Q ss_pred CCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 97 GGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 97 ~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
..+++.++|||+||.+++.++..
T Consensus 79 --~~~~~~lvGhS~Gg~va~~~a~~ 101 (255)
T PRK10673 79 --QIEKATFIGHSMGGKAVMALTAL 101 (255)
T ss_pred --CCCceEEEEECHHHHHHHHHHHh
Confidence 24679999999999999998864
No 37
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.95 E-value=4.4e-09 Score=79.08 Aligned_cols=93 Identities=22% Similarity=0.250 Sum_probs=59.0
Q ss_pred CCceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCC--CCCCCccHHHHHHHHHHHHHhhh
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGS--STVTNFGIMDQVAALQWIKDNIE 94 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~--~~~~~~~~~D~~~a~~~l~~~~~ 94 (130)
.+.|+||++||.+ ++...+..+. ...+.|+.|+.+|+| |++.+.... ........+|+..+++++....
T Consensus 134 ~~~~~Vl~lHG~~---~~~~~~~~~a~~L~~~Gy~V~~~D~r----GhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~- 205 (395)
T PLN02652 134 EMRGILIIIHGLN---EHSGRYLHFAKQLTSCGFGVYAMDWI----GHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSEN- 205 (395)
T ss_pred CCceEEEEECCch---HHHHHHHHHHHHHHHCCCEEEEeCCC----CCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhC-
Confidence 3568999999943 2222344333 334579999999999 333332211 1122334567777777775432
Q ss_pred hhCCCCCCeEEEEcChhHHHHHHHHhCC
Q psy13951 95 HFGGDPTSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 95 ~~~~d~~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
+..+++++|||+||.+++.++..|
T Consensus 206 ----~~~~i~lvGhSmGG~ial~~a~~p 229 (395)
T PLN02652 206 ----PGVPCFLFGHSTGGAVVLKAASYP 229 (395)
T ss_pred ----CCCCEEEEEECHHHHHHHHHHhcc
Confidence 224799999999999998877654
No 38
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.95 E-value=6.3e-09 Score=81.19 Aligned_cols=97 Identities=13% Similarity=-0.003 Sum_probs=64.2
Q ss_pred CCCceEEEEEeCCCcccCC--CCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhh
Q psy13951 17 YRRHSVLVIIHGESYSFGS--GNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIE 94 (130)
Q Consensus 17 ~~~~Pvvv~iHGGg~~~g~--~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~ 94 (130)
.++.|+||++||-+..... ...........+.||.|+.+|+| |++.+............+|+.++++|+.++.
T Consensus 19 ~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~R----G~g~S~g~~~~~~~~~~~D~~~~i~~l~~q~- 93 (550)
T TIGR00976 19 GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTR----GRGASEGEFDLLGSDEAADGYDLVDWIAKQP- 93 (550)
T ss_pred CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEecc----ccccCCCceEecCcccchHHHHHHHHHHhCC-
Confidence 3478999999984432210 01111222445579999999999 3333333211111557789999999998652
Q ss_pred hhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 95 HFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 95 ~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
+ ...||+++|+|+||.+++.++..
T Consensus 94 -~--~~~~v~~~G~S~GG~~a~~~a~~ 117 (550)
T TIGR00976 94 -W--CDGNVGMLGVSYLAVTQLLAAVL 117 (550)
T ss_pred -C--CCCcEEEEEeChHHHHHHHHhcc
Confidence 2 23699999999999999988864
No 39
>PHA02857 monoglyceride lipase; Provisional
Probab=98.95 E-value=7e-09 Score=73.72 Aligned_cols=91 Identities=20% Similarity=0.235 Sum_probs=57.3
Q ss_pred CCceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCC--CCCCCccHHHHHHHHHHHHHhhh
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGS--STVTNFGIMDQVAALQWIKDNIE 94 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~--~~~~~~~~~D~~~a~~~l~~~~~ 94 (130)
.+.|+|+++||.+ .+...+.... ...+.|+.|+++|+| |++.+.... ...+...++|+.+.++++++.
T Consensus 23 ~~~~~v~llHG~~---~~~~~~~~~~~~l~~~g~~via~D~~----G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~-- 93 (276)
T PHA02857 23 YPKALVFISHGAG---EHSGRYEELAENISSLGILVFSHDHI----GHGRSNGEKMMIDDFGVYVRDVVQHVVTIKST-- 93 (276)
T ss_pred CCCEEEEEeCCCc---cccchHHHHHHHHHhCCCEEEEccCC----CCCCCCCccCCcCCHHHHHHHHHHHHHHHHhh--
Confidence 3458999999943 2333444444 445569999999999 333332211 112222355666666655432
Q ss_pred hhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 95 HFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 95 ~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+ ..++++|+|||+||.+++.++.
T Consensus 94 -~--~~~~~~lvG~S~GG~ia~~~a~ 116 (276)
T PHA02857 94 -Y--PGVPVFLLGHSMGATISILAAY 116 (276)
T ss_pred -C--CCCCEEEEEcCchHHHHHHHHH
Confidence 1 2367999999999999998885
No 40
>PLN02511 hydrolase
Probab=98.94 E-value=1.2e-08 Score=76.52 Aligned_cols=92 Identities=18% Similarity=0.141 Sum_probs=60.1
Q ss_pred CceEEEEEeCCCcccCCCCcch-hHH-HhhcCCeEEEeeccccccccCCCCCCC-CCCCCCccHHHHHHHHHHHHHhhhh
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYD-GFV-LASYANMVVVTFNFRLGILGFLRPGVG-SSTVTNFGIMDQVAALQWIKDNIEH 95 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~-~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~-~~~~~~~~~~D~~~a~~~l~~~~~~ 95 (130)
..|+||++||.+ .++...|. ... .+.+.|+.|+++|+|- ++.+... +........+|+.++++++....
T Consensus 99 ~~p~vvllHG~~--g~s~~~y~~~~~~~~~~~g~~vv~~d~rG----~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~-- 170 (388)
T PLN02511 99 DAPVLILLPGLT--GGSDDSYVRHMLLRARSKGWRVVVFNSRG----CADSPVTTPQFYSASFTGDLRQVVDHVAGRY-- 170 (388)
T ss_pred CCCEEEEECCCC--CCCCCHHHHHHHHHHHHCCCEEEEEecCC----CCCCCCCCcCEEcCCchHHHHHHHHHHHHHC--
Confidence 468999999932 22222232 222 3456799999999993 3332211 11112344678889999887643
Q ss_pred hCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 96 FGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 96 ~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
...+++++|+|+||++++.++..
T Consensus 171 ---~~~~~~lvG~SlGg~i~~~yl~~ 193 (388)
T PLN02511 171 ---PSANLYAAGWSLGANILVNYLGE 193 (388)
T ss_pred ---CCCCEEEEEechhHHHHHHHHHh
Confidence 23589999999999999988753
No 41
>KOG1552|consensus
Probab=98.93 E-value=5.7e-09 Score=73.33 Aligned_cols=92 Identities=24% Similarity=0.450 Sum_probs=66.6
Q ss_pred CceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhC
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFG 97 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~ 97 (130)
..++++|.||-..-.| ....... +....++.++..||+ |++.+...+... ...+|+.++++|+++. +|
T Consensus 59 ~~~~lly~hGNa~Dlg--q~~~~~~~l~~~ln~nv~~~DYS----GyG~S~G~psE~--n~y~Di~avye~Lr~~---~g 127 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLG--QMVELFKELSIFLNCNVVSYDYS----GYGRSSGKPSER--NLYADIKAVYEWLRNR---YG 127 (258)
T ss_pred cceEEEEcCCcccchH--HHHHHHHHHhhcccceEEEEecc----cccccCCCcccc--cchhhHHHHHHHHHhh---cC
Confidence 3589999999654444 1111111 555679999999999 555555544433 5578999999999874 44
Q ss_pred CCCCCeEEEEcChhHHHHHHHHhCC
Q psy13951 98 GDPTSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 98 ~d~~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
.+++|+|+|+|.|..-+..+|...
T Consensus 128 -~~~~Iil~G~SiGt~~tv~Lasr~ 151 (258)
T KOG1552|consen 128 -SPERIILYGQSIGTVPTVDLASRY 151 (258)
T ss_pred -CCceEEEEEecCCchhhhhHhhcC
Confidence 579999999999999988887643
No 42
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.88 E-value=2.6e-08 Score=68.15 Aligned_cols=87 Identities=16% Similarity=0.293 Sum_probs=51.9
Q ss_pred eEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHH-HHHHHHhhhhhCC
Q psy13951 21 SVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAA-LQWIKDNIEHFGG 98 (130)
Q Consensus 21 Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a-~~~l~~~~~~~~~ 98 (130)
|.||++||.+ ++...+.... ..+ .++.|+.+|+|- ++.+.. +.......+++.... +..+. ..+
T Consensus 2 ~~vv~~hG~~---~~~~~~~~~~~~L~-~~~~v~~~d~~g----~G~s~~-~~~~~~~~~~~~~~~~~~~~~---~~~-- 67 (251)
T TIGR03695 2 PVLVFLHGFL---GSGADWQALIELLG-PHFRCLAIDLPG----HGSSQS-PDEIERYDFEEAAQDILATLL---DQL-- 67 (251)
T ss_pred CEEEEEcCCC---CchhhHHHHHHHhc-ccCeEEEEcCCC----CCCCCC-CCccChhhHHHHHHHHHHHHH---HHc--
Confidence 6899999943 3344454444 223 689999999983 222211 111122233333333 33332 222
Q ss_pred CCCCeEEEEcChhHHHHHHHHhC
Q psy13951 99 DPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 99 d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
+.+++.++|||+||.+++.++..
T Consensus 68 ~~~~~~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 68 GIEPFFLVGYSMGGRIALYYALQ 90 (251)
T ss_pred CCCeEEEEEeccHHHHHHHHHHh
Confidence 35789999999999999998763
No 43
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.87 E-value=4.2e-08 Score=67.35 Aligned_cols=88 Identities=17% Similarity=0.179 Sum_probs=52.7
Q ss_pred CceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCC
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGG 98 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~ 98 (130)
+.|+||++||-+. +...+....-....++.|+++|+| |++.+.. + .....+.+..+.+..+.+. +
T Consensus 12 ~~~~li~~hg~~~---~~~~~~~~~~~l~~~~~v~~~d~~----G~G~s~~-~--~~~~~~~~~~~~~~~~i~~---~-- 76 (251)
T TIGR02427 12 GAPVLVFINSLGT---DLRMWDPVLPALTPDFRVLRYDKR----GHGLSDA-P--EGPYSIEDLADDVLALLDH---L-- 76 (251)
T ss_pred CCCeEEEEcCccc---chhhHHHHHHHhhcccEEEEecCC----CCCCCCC-C--CCCCCHHHHHHHHHHHHHH---h--
Confidence 4589999999432 223343343222358999999999 3333221 1 1223344544444333332 2
Q ss_pred CCCCeEEEEcChhHHHHHHHHhC
Q psy13951 99 DPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 99 d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
+.+++.++|||+||.+++.++..
T Consensus 77 ~~~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 77 GIERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred CCCceEEEEeCchHHHHHHHHHH
Confidence 34689999999999999987753
No 44
>PRK10749 lysophospholipase L2; Provisional
Probab=98.87 E-value=1.7e-08 Score=74.04 Aligned_cols=90 Identities=21% Similarity=0.129 Sum_probs=53.2
Q ss_pred CceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCC-C------CCCCccHHHHHHHHHHHH
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGS-S------TVTNFGIMDQVAALQWIK 90 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~-~------~~~~~~~~D~~~a~~~l~ 90 (130)
+.++||++||- .++...|.... ...+.|+.|+.+|+| |++.+.... . .......+|+.+.++.+.
T Consensus 53 ~~~~vll~HG~---~~~~~~y~~~~~~l~~~g~~v~~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 125 (330)
T PRK10749 53 HDRVVVICPGR---IESYVKYAELAYDLFHLGYDVLIIDHR----GQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEI 125 (330)
T ss_pred CCcEEEEECCc---cchHHHHHHHHHHHHHCCCeEEEEcCC----CCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHH
Confidence 44789999993 23333444444 344679999999999 333332210 0 011222233333333322
Q ss_pred HhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 91 DNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 91 ~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+ . .+..+++++|||+||.+++.++.
T Consensus 126 ~---~--~~~~~~~l~GhSmGG~ia~~~a~ 150 (330)
T PRK10749 126 Q---P--GPYRKRYALAHSMGGAILTLFLQ 150 (330)
T ss_pred h---c--CCCCCeEEEEEcHHHHHHHHHHH
Confidence 1 1 23578999999999999988775
No 45
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.86 E-value=4.2e-08 Score=67.96 Aligned_cols=88 Identities=22% Similarity=0.254 Sum_probs=51.8
Q ss_pred CceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCC
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGG 98 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~ 98 (130)
+.|+||++||.+ ++...+....-.-..++.|+.+|+| |++.+.... .....++|..+.+.-+.+ ..
T Consensus 12 ~~~~iv~lhG~~---~~~~~~~~~~~~l~~~~~vi~~D~~----G~G~S~~~~--~~~~~~~~~~~~~~~~i~---~~-- 77 (257)
T TIGR03611 12 DAPVVVLSSGLG---GSGSYWAPQLDVLTQRFHVVTYDHR----GTGRSPGEL--PPGYSIAHMADDVLQLLD---AL-- 77 (257)
T ss_pred CCCEEEEEcCCC---cchhHHHHHHHHHHhccEEEEEcCC----CCCCCCCCC--cccCCHHHHHHHHHHHHH---Hh--
Confidence 458999999943 2333333333112347999999999 333332211 122234444333322222 22
Q ss_pred CCCCeEEEEcChhHHHHHHHHh
Q psy13951 99 DPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 99 d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+..+++++|+|+||.++..++.
T Consensus 78 ~~~~~~l~G~S~Gg~~a~~~a~ 99 (257)
T TIGR03611 78 NIERFHFVGHALGGLIGLQLAL 99 (257)
T ss_pred CCCcEEEEEechhHHHHHHHHH
Confidence 3578999999999999998875
No 46
>COG1647 Esterase/lipase [General function prediction only]
Probab=98.85 E-value=1.3e-08 Score=70.12 Aligned_cols=95 Identities=12% Similarity=-0.003 Sum_probs=69.1
Q ss_pred eEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCC-CCCCCCccHHHHHHHHHHHHHhhhhhCC
Q psy13951 21 SVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVG-SSTVTNFGIMDQVAALQWIKDNIEHFGG 98 (130)
Q Consensus 21 Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~-~~~~~~~~~~D~~~a~~~l~~~~~~~~~ 98 (130)
-.|+++|| ..|+......+. ...+.|+.|.+|+|+ |.+..... -......-.+|+.+++++|.+..
T Consensus 16 ~AVLllHG---FTGt~~Dvr~Lgr~L~e~GyTv~aP~yp----GHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~g----- 83 (243)
T COG1647 16 RAVLLLHG---FTGTPRDVRMLGRYLNENGYTVYAPRYP----GHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAG----- 83 (243)
T ss_pred EEEEEEec---cCCCcHHHHHHHHHHHHCCceEecCCCC----CCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcC-----
Confidence 68999999 566666666555 566679999999999 22222211 22334445678888999887543
Q ss_pred CCCCeEEEEcChhHHHHHHHHhCCCCCCCC
Q psy13951 99 DPTSVTLMGHGTGAASINFLMLSPLLSPSY 128 (130)
Q Consensus 99 d~~ri~l~G~SaGg~~a~~~~~~~~~~g~~ 128 (130)
-++|++.|-|+||-+++.++.+-..++++
T Consensus 84 -y~eI~v~GlSmGGv~alkla~~~p~K~iv 112 (243)
T COG1647 84 -YDEIAVVGLSMGGVFALKLAYHYPPKKIV 112 (243)
T ss_pred -CCeEEEEeecchhHHHHHHHhhCCcccee
Confidence 37999999999999999999876666654
No 47
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.84 E-value=3.3e-08 Score=74.77 Aligned_cols=92 Identities=15% Similarity=0.052 Sum_probs=55.8
Q ss_pred CCCceEEEEEeCCCcccCCC-CcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhh
Q psy13951 17 YRRHSVLVIIHGESYSFGSG-NIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIE 94 (130)
Q Consensus 17 ~~~~Pvvv~iHGGg~~~g~~-~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~ 94 (130)
.++.|+||+.||.+ +.. +.+.... ...+.|+.|+++|+|- ++.+...+. .........++++|+.+..
T Consensus 191 ~~~~P~Vli~gG~~---~~~~~~~~~~~~~La~~Gy~vl~~D~pG----~G~s~~~~~--~~d~~~~~~avld~l~~~~- 260 (414)
T PRK05077 191 DGPFPTVLVCGGLD---SLQTDYYRLFRDYLAPRGIAMLTIDMPS----VGFSSKWKL--TQDSSLLHQAVLNALPNVP- 260 (414)
T ss_pred CCCccEEEEeCCcc---cchhhhHHHHHHHHHhCCCEEEEECCCC----CCCCCCCCc--cccHHHHHHHHHHHHHhCc-
Confidence 35679888766622 222 2233333 4456799999999993 222211010 0111112245677776532
Q ss_pred hhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 95 HFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 95 ~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.+|++||+++|+|+||++++.++.
T Consensus 261 --~vd~~ri~l~G~S~GG~~Al~~A~ 284 (414)
T PRK05077 261 --WVDHTRVAAFGFRFGANVAVRLAY 284 (414)
T ss_pred --ccCcccEEEEEEChHHHHHHHHHH
Confidence 368899999999999999998885
No 48
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.83 E-value=5.4e-08 Score=68.29 Aligned_cols=91 Identities=15% Similarity=0.161 Sum_probs=53.1
Q ss_pred ceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCC
Q psy13951 20 HSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGG 98 (130)
Q Consensus 20 ~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~ 98 (130)
.|.||++||+.... ...+.... ++.+.|+.|+.+|+| |++.+...........+++..+.+..+.+. +
T Consensus 25 ~~~vl~~hG~~g~~--~~~~~~~~~~l~~~g~~vi~~d~~----G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~-- 93 (288)
T TIGR01250 25 KIKLLLLHGGPGMS--HEYLENLRELLKEEGREVIMYDQL----GCGYSDQPDDSDELWTIDYFVDELEEVREK---L-- 93 (288)
T ss_pred CCeEEEEcCCCCcc--HHHHHHHHHHHHhcCCEEEEEcCC----CCCCCCCCCcccccccHHHHHHHHHHHHHH---c--
Confidence 47889999964221 12222222 445558999999999 333322111111013345555444444332 2
Q ss_pred CCCCeEEEEcChhHHHHHHHHhC
Q psy13951 99 DPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 99 d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
+.++++++|||+||.+++.++..
T Consensus 94 ~~~~~~liG~S~Gg~ia~~~a~~ 116 (288)
T TIGR01250 94 GLDKFYLLGHSWGGMLAQEYALK 116 (288)
T ss_pred CCCcEEEEEeehHHHHHHHHHHh
Confidence 24579999999999999998763
No 49
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.81 E-value=7e-08 Score=69.65 Aligned_cols=89 Identities=19% Similarity=0.235 Sum_probs=54.2
Q ss_pred ceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCC
Q psy13951 20 HSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGG 98 (130)
Q Consensus 20 ~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~ 98 (130)
.|.||++||.+ .+...|.... ...+.|+.|+++|.| |++.+.. +.......+++..+.+.-+. ...+
T Consensus 46 ~~~lvliHG~~---~~~~~w~~~~~~L~~~gy~vi~~Dl~----G~G~S~~-~~~~~~~~~~~~a~~l~~~l---~~l~- 113 (302)
T PRK00870 46 GPPVLLLHGEP---SWSYLYRKMIPILAAAGHRVIAPDLI----GFGRSDK-PTRREDYTYARHVEWMRSWF---EQLD- 113 (302)
T ss_pred CCEEEEECCCC---CchhhHHHHHHHHHhCCCEEEEECCC----CCCCCCC-CCCcccCCHHHHHHHHHHHH---HHcC-
Confidence 47899999942 2333444444 334468999999999 4444332 11112233444443333222 2323
Q ss_pred CCCCeEEEEcChhHHHHHHHHhC
Q psy13951 99 DPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 99 d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.+++.++|||+||.++..++..
T Consensus 114 -~~~v~lvGhS~Gg~ia~~~a~~ 135 (302)
T PRK00870 114 -LTDVTLVCQDWGGLIGLRLAAE 135 (302)
T ss_pred -CCCEEEEEEChHHHHHHHHHHh
Confidence 4689999999999999998863
No 50
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.80 E-value=4.1e-08 Score=69.11 Aligned_cols=99 Identities=15% Similarity=0.142 Sum_probs=67.4
Q ss_pred CCceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeecccc--ccccCCCCCCC---C----CCCCCccHHHHHHHHH
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRL--GILGFLRPGVG---S----STVTNFGIMDQVAALQ 87 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl--~~~~~~~~~~~---~----~~~~~~~~~D~~~a~~ 87 (130)
.+.|+||.+|+ +.|........+ ..+.+|+.|++|+.=- +.......... . .........|+.++++
T Consensus 25 ~~~P~VIv~he---i~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~ 101 (236)
T COG0412 25 GGFPGVIVLHE---IFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALD 101 (236)
T ss_pred CCCCEEEEEec---ccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHH
Confidence 34499999999 555555555555 5556899999998642 22111111110 1 1112455678888999
Q ss_pred HHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhCC
Q psy13951 88 WIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 88 ~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
||..+.. +|++||+++|+|+||.+++.++...
T Consensus 102 ~L~~~~~---~~~~~ig~~GfC~GG~~a~~~a~~~ 133 (236)
T COG0412 102 YLARQPQ---VDPKRIGVVGFCMGGGLALLAATRA 133 (236)
T ss_pred HHHhCCC---CCCceEEEEEEcccHHHHHHhhccc
Confidence 9976543 6889999999999999999998765
No 51
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.79 E-value=1.5e-08 Score=75.82 Aligned_cols=100 Identities=20% Similarity=0.247 Sum_probs=53.1
Q ss_pred CCceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeecccccccc--CC-CCCC------------C------CCCCC
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILG--FL-RPGV------------G------SSTVT 75 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~--~~-~~~~------------~------~~~~~ 75 (130)
.++|||||-|| ..|.+..|...+ -.+..|++|+++++|-++.. +. .... + .....
T Consensus 98 ~~~PvvIFSHG---lgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T PF03403_consen 98 GKFPVVIFSHG---LGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDP 174 (379)
T ss_dssp S-EEEEEEE-----TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----G
T ss_pred CCCCEEEEeCC---CCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccc
Confidence 67999999999 456677788887 33447999999999975321 11 0000 0 00000
Q ss_pred Cc-------c----HHHHHHHHHHHHHhh---------------hhh--CCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 76 NF-------G----IMDQVAALQWIKDNI---------------EHF--GGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 76 ~~-------~----~~D~~~a~~~l~~~~---------------~~~--~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+. + ..|+..+++.+.+.. ..+ .+|.+||+++|||.||..++.++.
T Consensus 175 ~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~ 247 (379)
T PF03403_consen 175 EEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALR 247 (379)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHh
Confidence 00 1 234555666554311 111 357889999999999999988764
No 52
>PRK11460 putative hydrolase; Provisional
Probab=98.79 E-value=6.3e-08 Score=67.88 Aligned_cols=34 Identities=15% Similarity=0.135 Sum_probs=27.6
Q ss_pred HHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 87 QWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 87 ~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+++.....+++++++||+++|+|.||.+++.++.
T Consensus 89 ~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~ 122 (232)
T PRK11460 89 ETVRYWQQQSGVGASATALIGFSQGAIMALEAVK 122 (232)
T ss_pred HHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHH
Confidence 4444445567889999999999999999998875
No 53
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.78 E-value=1.1e-07 Score=68.00 Aligned_cols=92 Identities=17% Similarity=0.170 Sum_probs=54.5
Q ss_pred CCCCceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhh
Q psy13951 16 TYRRHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIE 94 (130)
Q Consensus 16 ~~~~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~ 94 (130)
+.++.|.||++||.+. +...|..+. ...+.|+.|+.+++|- +..+.. .......+++..+.+. +.+.
T Consensus 14 ~~~~~p~vvliHG~~~---~~~~w~~~~~~L~~~g~~vi~~dl~g----~G~s~~--~~~~~~~~~~~~~~l~---~~i~ 81 (273)
T PLN02211 14 PNRQPPHFVLIHGISG---GSWCWYKIRCLMENSGYKVTCIDLKS----AGIDQS--DADSVTTFDEYNKPLI---DFLS 81 (273)
T ss_pred ccCCCCeEEEECCCCC---CcCcHHHHHHHHHhCCCEEEEecccC----CCCCCC--CcccCCCHHHHHHHHH---HHHH
Confidence 4445689999999443 333454444 4445699999999983 222111 1111234444443322 2222
Q ss_pred hhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 95 HFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 95 ~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
... ..++++|+|||+||.++..++.
T Consensus 82 ~l~-~~~~v~lvGhS~GG~v~~~~a~ 106 (273)
T PLN02211 82 SLP-ENEKVILVGHSAGGLSVTQAIH 106 (273)
T ss_pred hcC-CCCCEEEEEECchHHHHHHHHH
Confidence 222 1378999999999999888875
No 54
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.74 E-value=1.2e-07 Score=64.00 Aligned_cols=84 Identities=24% Similarity=0.339 Sum_probs=51.3
Q ss_pred EEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCCCC
Q psy13951 23 LVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPT 101 (130)
Q Consensus 23 vv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ 101 (130)
||++||.+. +...+.... ..+ .|+.|+++|+| |++.+.... ......+++..+.+..+.+.. + .+
T Consensus 1 vv~~hG~~~---~~~~~~~~~~~l~-~~~~v~~~d~~----G~G~s~~~~-~~~~~~~~~~~~~l~~~l~~~---~--~~ 66 (228)
T PF12697_consen 1 VVFLHGFGG---SSESWDPLAEALA-RGYRVIAFDLP----GHGRSDPPP-DYSPYSIEDYAEDLAELLDAL---G--IK 66 (228)
T ss_dssp EEEE-STTT---TGGGGHHHHHHHH-TTSEEEEEECT----TSTTSSSHS-SGSGGSHHHHHHHHHHHHHHT---T--TS
T ss_pred eEEECCCCC---CHHHHHHHHHHHh-CCCEEEEEecC----Ccccccccc-ccCCcchhhhhhhhhhccccc---c--cc
Confidence 799999543 334455555 333 69999999999 333332211 112344455544444333332 2 37
Q ss_pred CeEEEEcChhHHHHHHHHh
Q psy13951 102 SVTLMGHGTGAASINFLML 120 (130)
Q Consensus 102 ri~l~G~SaGg~~a~~~~~ 120 (130)
+++++|||.||.+++.++.
T Consensus 67 ~~~lvG~S~Gg~~a~~~a~ 85 (228)
T PF12697_consen 67 KVILVGHSMGGMIALRLAA 85 (228)
T ss_dssp SEEEEEETHHHHHHHHHHH
T ss_pred ccccccccccccccccccc
Confidence 8999999999999999886
No 55
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.74 E-value=1.5e-07 Score=63.71 Aligned_cols=97 Identities=22% Similarity=0.128 Sum_probs=66.6
Q ss_pred CCCceEEEEEeCCCcccCCCCcc---hhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhh
Q psy13951 17 YRRHSVLVIIHGESYSFGSGNIY---DGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNI 93 (130)
Q Consensus 17 ~~~~Pvvv~iHGGg~~~g~~~~~---~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~ 93 (130)
.+.+|+.|..|-=....|+.... .....+.+.|+.++.+|||-- +.++. .--.+--.++|+.++++|++...
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgV----G~S~G-~fD~GiGE~~Da~aaldW~~~~h 99 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGV----GRSQG-EFDNGIGELEDAAAALDWLQARH 99 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeeccccc----ccccC-cccCCcchHHHHHHHHHHHHhhC
Confidence 45679999999866665665532 222266778999999999941 11111 11223335789999999999765
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHHhCC
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
. +..-..++|+|.|+.+++.+++..
T Consensus 100 p----~s~~~~l~GfSFGa~Ia~~la~r~ 124 (210)
T COG2945 100 P----DSASCWLAGFSFGAYIAMQLAMRR 124 (210)
T ss_pred C----CchhhhhcccchHHHHHHHHHHhc
Confidence 3 233357899999999999998743
No 56
>KOG3847|consensus
Probab=98.73 E-value=5.6e-08 Score=70.24 Aligned_cols=103 Identities=18% Similarity=0.202 Sum_probs=65.1
Q ss_pred CCCCCceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeecccccc--ccCCCCCC--C--------------C-CC-
Q psy13951 15 RTYRRHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGI--LGFLRPGV--G--------------S-ST- 73 (130)
Q Consensus 15 ~~~~~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~--~~~~~~~~--~--------------~-~~- 73 (130)
....|+|++||-|| ..|++..|..++ -.+..|++|.++++|-.+ +.+....- . . +.
T Consensus 113 tk~~k~PvvvFSHG---LggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~eke 189 (399)
T KOG3847|consen 113 TKNDKYPVVVFSHG---LGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKE 189 (399)
T ss_pred CCCCCccEEEEecc---cccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCcee
Confidence 44678999999999 445666788888 445579999999999632 22211110 0 0 00
Q ss_pred --CCCc----cHHHHHHHHHHHHHhh----------------h--hhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 74 --VTNF----GIMDQVAALQWIKDNI----------------E--HFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 74 --~~~~----~~~D~~~a~~~l~~~~----------------~--~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
-.+. -.++|..|++-+.+.- . +-++|.+++.|+|||.||..+.....
T Consensus 190 f~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss 260 (399)
T KOG3847|consen 190 FHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSS 260 (399)
T ss_pred EEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhc
Confidence 0111 1346667777665421 0 01468889999999999988776554
No 57
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.72 E-value=4.3e-08 Score=72.15 Aligned_cols=92 Identities=21% Similarity=0.334 Sum_probs=50.4
Q ss_pred CCCceEEEEEeCCCcccCC-CCcchhH-H--Hhhc--CCeEEEeeccccccccCCCCCCCCCCCCCccHHHHH---HHHH
Q psy13951 17 YRRHSVLVIIHGESYSFGS-GNIYDGF-V--LASY--ANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQV---AALQ 87 (130)
Q Consensus 17 ~~~~Pvvv~iHGGg~~~g~-~~~~~~~-~--~~~~--~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~---~a~~ 87 (130)
+.++|++|+||| |.... ...+... . +..+ .++.|+.+|+.... ...+........ ..+.
T Consensus 68 n~~~pt~iiiHG--w~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a----------~~~Y~~a~~n~~~vg~~la 135 (331)
T PF00151_consen 68 NPSKPTVIIIHG--WTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGA----------SNNYPQAVANTRLVGRQLA 135 (331)
T ss_dssp -TTSEEEEEE----TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHH----------SS-HHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcC--cCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhc----------cccccchhhhHHHHHHHHH
Confidence 446799999999 65444 2222111 1 3344 68999999998652 222222222222 2222
Q ss_pred -HHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 88 -WIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 88 -~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
++.......++++++|.|+|||.|||+|..+..
T Consensus 136 ~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~ 169 (331)
T PF00151_consen 136 KFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGK 169 (331)
T ss_dssp HHHHHHHHHH---GGGEEEEEETCHHHHHHHHHH
T ss_pred HHHHHHHhhcCCChhHEEEEeeccchhhhhhhhh
Confidence 233333356889999999999999999998874
No 58
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.72 E-value=1.6e-07 Score=66.16 Aligned_cols=88 Identities=19% Similarity=0.214 Sum_probs=53.8
Q ss_pred ceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCC
Q psy13951 20 HSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGD 99 (130)
Q Consensus 20 ~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d 99 (130)
.|+||++||.+ ++...+....-....++.|+.+|+| |++.+.... ..+..+++..+.+..+.+. ++
T Consensus 28 ~~~vv~~hG~~---~~~~~~~~~~~~l~~~~~vi~~D~~----G~G~S~~~~--~~~~~~~~~~~~l~~~i~~---~~-- 93 (278)
T TIGR03056 28 GPLLLLLHGTG---ASTHSWRDLMPPLARSFRVVAPDLP----GHGFTRAPF--RFRFTLPSMAEDLSALCAA---EG-- 93 (278)
T ss_pred CCeEEEEcCCC---CCHHHHHHHHHHHhhCcEEEeecCC----CCCCCCCcc--ccCCCHHHHHHHHHHHHHH---cC--
Confidence 47999999943 3333444444122236999999999 333332211 1233455655555444432 22
Q ss_pred CCCeEEEEcChhHHHHHHHHhC
Q psy13951 100 PTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.++++|+|||+||.+++.++..
T Consensus 94 ~~~~~lvG~S~Gg~~a~~~a~~ 115 (278)
T TIGR03056 94 LSPDGVIGHSAGAAIALRLALD 115 (278)
T ss_pred CCCceEEEECccHHHHHHHHHh
Confidence 3678999999999999988863
No 59
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.71 E-value=1e-07 Score=67.63 Aligned_cols=90 Identities=19% Similarity=0.246 Sum_probs=48.5
Q ss_pred ceEEEEEeCCCcccCCCCcc-hhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCC
Q psy13951 20 HSVLVIIHGESYSFGSGNIY-DGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGG 98 (130)
Q Consensus 20 ~Pvvv~iHGGg~~~g~~~~~-~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~ 98 (130)
.|.||++||.+........+ .......+.++.|+++|+| |++.+..... ..........+ +.+....+
T Consensus 30 ~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~----G~G~S~~~~~-~~~~~~~~~~~----l~~~l~~l-- 98 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSP----GFNKSDAVVM-DEQRGLVNARA----VKGLMDAL-- 98 (282)
T ss_pred CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCC----CCCCCCCCcC-cccccchhHHH----HHHHHHHc--
Confidence 46799999943221111111 1122233468999999999 3433332110 00111111111 22222222
Q ss_pred CCCCeEEEEcChhHHHHHHHHh
Q psy13951 99 DPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 99 d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+.++++++|||+||.++..++.
T Consensus 99 ~~~~~~lvG~S~Gg~ia~~~a~ 120 (282)
T TIGR03343 99 DIEKAHLVGNSMGGATALNFAL 120 (282)
T ss_pred CCCCeeEEEECchHHHHHHHHH
Confidence 4579999999999999999886
No 60
>PLN02965 Probable pheophorbidase
Probab=98.70 E-value=2.3e-07 Score=65.47 Aligned_cols=87 Identities=20% Similarity=0.182 Sum_probs=51.8
Q ss_pred EEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCCC
Q psy13951 22 VLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDP 100 (130)
Q Consensus 22 vvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~ 100 (130)
.||++||.+ .+...|.... ..++.++.|+++|+| |++.+...+. ....+++..+-+ .+.+..++..
T Consensus 5 ~vvllHG~~---~~~~~w~~~~~~L~~~~~~via~Dl~----G~G~S~~~~~--~~~~~~~~a~dl---~~~l~~l~~~- 71 (255)
T PLN02965 5 HFVFVHGAS---HGAWCWYKLATLLDAAGFKSTCVDLT----GAGISLTDSN--TVSSSDQYNRPL---FALLSDLPPD- 71 (255)
T ss_pred EEEEECCCC---CCcCcHHHHHHHHhhCCceEEEecCC----cCCCCCCCcc--ccCCHHHHHHHH---HHHHHhcCCC-
Confidence 499999954 2334454443 333568999999999 3443322111 122344443322 2222333221
Q ss_pred CCeEEEEcChhHHHHHHHHhC
Q psy13951 101 TSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~~ 121 (130)
++++++|||+||.++..++..
T Consensus 72 ~~~~lvGhSmGG~ia~~~a~~ 92 (255)
T PLN02965 72 HKVILVGHSIGGGSVTEALCK 92 (255)
T ss_pred CCEEEEecCcchHHHHHHHHh
Confidence 589999999999999988873
No 61
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.69 E-value=2e-07 Score=67.02 Aligned_cols=88 Identities=15% Similarity=0.193 Sum_probs=56.2
Q ss_pred ceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCC
Q psy13951 20 HSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGD 99 (130)
Q Consensus 20 ~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d 99 (130)
.|.||++||.+ .+...+....-.-..++.|+++|+| |++.+.. +. .....+++..+.+..+.+.. +
T Consensus 34 ~~~iv~lHG~~---~~~~~~~~~~~~l~~~~~vi~~D~~----G~G~S~~-~~-~~~~~~~~~~~~~~~~~~~~-----~ 99 (286)
T PRK03204 34 GPPILLCHGNP---TWSFLYRDIIVALRDRFRCVAPDYL----GFGLSER-PS-GFGYQIDEHARVIGEFVDHL-----G 99 (286)
T ss_pred CCEEEEECCCC---ccHHHHHHHHHHHhCCcEEEEECCC----CCCCCCC-CC-ccccCHHHHHHHHHHHHHHh-----C
Confidence 47899999953 1222333333222346999999999 3333322 11 12345667777777666543 3
Q ss_pred CCCeEEEEcChhHHHHHHHHhC
Q psy13951 100 PTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.+++.++|||+||.++..++..
T Consensus 100 ~~~~~lvG~S~Gg~va~~~a~~ 121 (286)
T PRK03204 100 LDRYLSMGQDWGGPISMAVAVE 121 (286)
T ss_pred CCCEEEEEECccHHHHHHHHHh
Confidence 4689999999999999888753
No 62
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.68 E-value=1.3e-07 Score=65.78 Aligned_cols=84 Identities=14% Similarity=0.124 Sum_probs=51.6
Q ss_pred eEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCCC
Q psy13951 21 SVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDP 100 (130)
Q Consensus 21 Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~ 100 (130)
|.||++||.+. +...|....-.. .++.|+++|+| |++.+.. +. .. +.....+++.+.++.++ .
T Consensus 3 p~vvllHG~~~---~~~~w~~~~~~l-~~~~vi~~D~~----G~G~S~~-~~---~~---~~~~~~~~l~~~l~~~~--~ 65 (242)
T PRK11126 3 PWLVFLHGLLG---SGQDWQPVGEAL-PDYPRLYIDLP----GHGGSAA-IS---VD---GFADVSRLLSQTLQSYN--I 65 (242)
T ss_pred CEEEEECCCCC---ChHHHHHHHHHc-CCCCEEEecCC----CCCCCCC-cc---cc---CHHHHHHHHHHHHHHcC--C
Confidence 67999999533 223444343222 37999999999 3333322 11 11 22333344444444433 4
Q ss_pred CCeEEEEcChhHHHHHHHHhC
Q psy13951 101 TSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~~ 121 (130)
+++.++|||+||.+++.++..
T Consensus 66 ~~~~lvG~S~Gg~va~~~a~~ 86 (242)
T PRK11126 66 LPYWLVGYSLGGRIAMYYACQ 86 (242)
T ss_pred CCeEEEEECHHHHHHHHHHHh
Confidence 799999999999999999874
No 63
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.67 E-value=3.7e-07 Score=63.15 Aligned_cols=103 Identities=16% Similarity=0.156 Sum_probs=47.9
Q ss_pred CCCCceEEEEEeCCCcccCCCCc-chhHHH--hhcCCeEEEeeccccc----cccC---CCCCCC-CCCCCCccHHHHHH
Q psy13951 16 TYRRHSVLVIIHGESYSFGSGNI-YDGFVL--ASYANMVVVTFNFRLG----ILGF---LRPGVG-SSTVTNFGIMDQVA 84 (130)
Q Consensus 16 ~~~~~Pvvv~iHGGg~~~g~~~~-~~~~~~--~~~~g~~vv~~~yrl~----~~~~---~~~~~~-~~~~~~~~~~D~~~ 84 (130)
..++.|+||++||= |+... ...... .......++.++-... +.++ .+.... ..........++..
T Consensus 10 ~~~~~~lvi~LHG~----G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~ 85 (216)
T PF02230_consen 10 KGKAKPLVILLHGY----GDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEE 85 (216)
T ss_dssp SST-SEEEEEE--T----TS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHH
T ss_pred CCCCceEEEEECCC----CCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHH
Confidence 34567999999993 33321 111111 2234566666654321 1122 111111 11111122334443
Q ss_pred HHHH---HHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhCC
Q psy13951 85 ALQW---IKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 85 a~~~---l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
+.+. +.+...+.+++++||++.|+|.||.|++.+++..
T Consensus 86 s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~ 126 (216)
T PF02230_consen 86 SAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRY 126 (216)
T ss_dssp HHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHc
Confidence 3333 3333334579999999999999999999998743
No 64
>KOG2564|consensus
Probab=98.67 E-value=1.1e-07 Score=67.84 Aligned_cols=91 Identities=23% Similarity=0.221 Sum_probs=57.7
Q ss_pred CCceEEEEEeCCCcccCCCCcchhHH--HhhcCCeEEEeeccccccccCCCCCCC--CCCCCCccHHHHHHHHHHHHHhh
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLGILGFLRPGVG--SSTVTNFGIMDQVAALQWIKDNI 93 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~~~~~--~~~~~g~~vv~~~yrl~~~~~~~~~~~--~~~~~~~~~~D~~~a~~~l~~~~ 93 (130)
+.-|++++.||||+..-+. ..++ +..+..+.++++|-|- ...+--. .+...+....|.-+.++.+
T Consensus 72 t~gpil~l~HG~G~S~LSf---A~~a~el~s~~~~r~~a~DlRg----HGeTk~~~e~dlS~eT~~KD~~~~i~~~---- 140 (343)
T KOG2564|consen 72 TEGPILLLLHGGGSSALSF---AIFASELKSKIRCRCLALDLRG----HGETKVENEDDLSLETMSKDFGAVIKEL---- 140 (343)
T ss_pred CCccEEEEeecCcccchhH---HHHHHHHHhhcceeEEEeeccc----cCccccCChhhcCHHHHHHHHHHHHHHH----
Confidence 3568999999998754332 2222 5555677789999993 2222211 1222333444555444433
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
|+-++..|+|+|||+||.+|.+.+.+
T Consensus 141 --fge~~~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 141 --FGELPPQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred --hccCCCceEEEeccccchhhhhhhhh
Confidence 34467889999999999999888764
No 65
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.67 E-value=6.5e-08 Score=70.91 Aligned_cols=104 Identities=13% Similarity=0.091 Sum_probs=59.2
Q ss_pred CCCCceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccC--------------CCCCCC--CCCC-CCcc
Q psy13951 16 TYRRHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGF--------------LRPGVG--SSTV-TNFG 78 (130)
Q Consensus 16 ~~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~--------------~~~~~~--~~~~-~~~~ 78 (130)
..++.|+||.+||-|.. ...+......+..|++++.++-|-..... ...+.. ++.. +...
T Consensus 79 ~~~~~Pavv~~hGyg~~---~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~ 155 (320)
T PF05448_consen 79 AKGKLPAVVQFHGYGGR---SGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRV 155 (320)
T ss_dssp SSSSEEEEEEE--TT-----GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHH
T ss_pred CCCCcCEEEEecCCCCC---CCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHH
Confidence 45789999999995432 11222222334579999999998422000 000000 0000 1123
Q ss_pred HHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh-CCCCC
Q psy13951 79 IMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML-SPLLS 125 (130)
Q Consensus 79 ~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~-~~~~~ 125 (130)
+.|+..+++++.+.. .+|.+||+++|.|.||.+++.++. .++++
T Consensus 156 ~~D~~ravd~l~slp---evD~~rI~v~G~SqGG~lal~~aaLd~rv~ 200 (320)
T PF05448_consen 156 YLDAVRAVDFLRSLP---EVDGKRIGVTGGSQGGGLALAAAALDPRVK 200 (320)
T ss_dssp HHHHHHHHHHHHTST---TEEEEEEEEEEETHHHHHHHHHHHHSST-S
T ss_pred HHHHHHHHHHHHhCC---CcCcceEEEEeecCchHHHHHHHHhCcccc
Confidence 578888999887643 368999999999999999998874 55443
No 66
>COG0400 Predicted esterase [General function prediction only]
Probab=98.64 E-value=4.6e-07 Score=62.56 Aligned_cols=103 Identities=17% Similarity=0.096 Sum_probs=59.5
Q ss_pred CCCCceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCC-CCCCCCCC--ccHHHHHHHHHHHHHh
Q psy13951 16 TYRRHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPG-VGSSTVTN--FGIMDQVAALQWIKDN 92 (130)
Q Consensus 16 ~~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~-~~~~~~~~--~~~~D~~~a~~~l~~~ 92 (130)
.+...|+||++||=| ++....-.......-...+++++=+..-.+..... ......++ ....+.....+++...
T Consensus 14 ~~p~~~~iilLHG~G---gde~~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~ 90 (207)
T COG0400 14 GDPAAPLLILLHGLG---GDELDLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEEL 90 (207)
T ss_pred CCCCCcEEEEEecCC---CChhhhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHH
Confidence 344568999999933 33322222221122245566665554311111000 00111222 1222334556778888
Q ss_pred hhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 93 IEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 93 ~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
..++++|++||++.|+|-|+++++.+++.
T Consensus 91 ~~~~gi~~~~ii~~GfSqGA~ial~~~l~ 119 (207)
T COG0400 91 AEEYGIDSSRIILIGFSQGANIALSLGLT 119 (207)
T ss_pred HHHhCCChhheEEEecChHHHHHHHHHHh
Confidence 89999999999999999999999998874
No 67
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.63 E-value=5.2e-07 Score=68.05 Aligned_cols=92 Identities=14% Similarity=0.151 Sum_probs=49.8
Q ss_pred CCceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHH-HHHHHHHhhhh
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVA-ALQWIKDNIEH 95 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~-a~~~l~~~~~~ 95 (130)
++.|.||++||.+.. ...+.... ... .++.|+.+|+| |++.+.. +.... ...++..+ .++.+.+....
T Consensus 103 ~~~p~vvllHG~~~~---~~~~~~~~~~L~-~~~~vi~~D~r----G~G~S~~-~~~~~-~~~~~~~~~~~~~i~~~~~~ 172 (402)
T PLN02894 103 EDAPTLVMVHGYGAS---QGFFFRNFDALA-SRFRVIAIDQL----GWGGSSR-PDFTC-KSTEETEAWFIDSFEEWRKA 172 (402)
T ss_pred CCCCEEEEECCCCcc---hhHHHHHHHHHH-hCCEEEEECCC----CCCCCCC-CCccc-ccHHHHHHHHHHHHHHHHHH
Confidence 345899999995432 22232222 222 36999999999 3333322 11110 01112111 11111111122
Q ss_pred hCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 96 FGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 96 ~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
. +.++++|+|||+||.+++.++..
T Consensus 173 l--~~~~~~lvGhS~GG~la~~~a~~ 196 (402)
T PLN02894 173 K--NLSNFILLGHSFGGYVAAKYALK 196 (402)
T ss_pred c--CCCCeEEEEECHHHHHHHHHHHh
Confidence 2 45689999999999999998864
No 68
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.63 E-value=1.9e-07 Score=66.74 Aligned_cols=98 Identities=12% Similarity=0.010 Sum_probs=64.9
Q ss_pred CCCCCCCceEEEEEeCCCcccCC--CCc---chhH-----HHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHH
Q psy13951 13 SSRTYRRHSVLVIIHGESYSFGS--GNI---YDGF-----VLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQ 82 (130)
Q Consensus 13 ~~~~~~~~Pvvv~iHGGg~~~g~--~~~---~~~~-----~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~ 82 (130)
..+..++.|+||..|+=+ ... ... .... ..+.+.||+||..|-| |++.++.......+...+|.
T Consensus 13 ~~~~~~~~P~il~~tpY~--~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~R----G~g~S~G~~~~~~~~e~~D~ 86 (272)
T PF02129_consen 13 GADGGGPFPVILTRTPYG--KGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVR----GTGGSEGEFDPMSPNEAQDG 86 (272)
T ss_dssp --TTSSSEEEEEEEESST--CTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-T----TSTTS-S-B-TTSHHHHHHH
T ss_pred CCCCCCcccEEEEccCcC--CCCCcccchhhhhcccchhHHHHHhCCCEEEEECCc----ccccCCCccccCChhHHHHH
Confidence 346677899999999932 111 010 0000 0156689999999999 45555543333367788899
Q ss_pred HHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 83 VAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 83 ~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.++++|+.++. -...||+++|.|++|..+..+|.
T Consensus 87 ~d~I~W~~~Qp----ws~G~VGm~G~SY~G~~q~~~A~ 120 (272)
T PF02129_consen 87 YDTIEWIAAQP----WSNGKVGMYGISYGGFTQWAAAA 120 (272)
T ss_dssp HHHHHHHHHCT----TEEEEEEEEEETHHHHHHHHHHT
T ss_pred HHHHHHHHhCC----CCCCeEEeeccCHHHHHHHHHHh
Confidence 99999998752 23569999999999999999887
No 69
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.62 E-value=4.3e-07 Score=64.68 Aligned_cols=86 Identities=15% Similarity=0.180 Sum_probs=50.5
Q ss_pred eEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCCC
Q psy13951 21 SVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDP 100 (130)
Q Consensus 21 Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~ 100 (130)
|.||++||-+ ++...+....-.-...+.|+++|+| |++.+.. +. ....+++..+-+.-+. +.+ +.
T Consensus 26 ~plvllHG~~---~~~~~w~~~~~~L~~~~~vi~~Dl~----G~G~S~~-~~--~~~~~~~~~~~~~~~i---~~l--~~ 90 (276)
T TIGR02240 26 TPLLIFNGIG---ANLELVFPFIEALDPDLEVIAFDVP----GVGGSST-PR--HPYRFPGLAKLAARML---DYL--DY 90 (276)
T ss_pred CcEEEEeCCC---cchHHHHHHHHHhccCceEEEECCC----CCCCCCC-CC--CcCcHHHHHHHHHHHH---HHh--Cc
Confidence 5789999932 2333344443212246899999999 4444432 11 1223344333322222 222 34
Q ss_pred CCeEEEEcChhHHHHHHHHhC
Q psy13951 101 TSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~~ 121 (130)
+++.|+|||+||.+++.++..
T Consensus 91 ~~~~LvG~S~GG~va~~~a~~ 111 (276)
T TIGR02240 91 GQVNAIGVSWGGALAQQFAHD 111 (276)
T ss_pred CceEEEEECHHHHHHHHHHHH
Confidence 689999999999999999864
No 70
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.62 E-value=4.1e-07 Score=65.30 Aligned_cols=89 Identities=10% Similarity=0.091 Sum_probs=53.6
Q ss_pred ceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCC----CCCCccHHHHHHHHHHHHHhhh
Q psy13951 20 HSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSS----TVTNFGIMDQVAALQWIKDNIE 94 (130)
Q Consensus 20 ~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~----~~~~~~~~D~~~a~~~l~~~~~ 94 (130)
.|.||++||.+ ++...+.... ...+ .+.|+++|.| |++.+..... ......++|..+.+.-+.+.
T Consensus 29 ~~~vlllHG~~---~~~~~w~~~~~~L~~-~~~vi~~Dlp----G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~-- 98 (294)
T PLN02824 29 GPALVLVHGFG---GNADHWRKNTPVLAK-SHRVYAIDLL----GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSD-- 98 (294)
T ss_pred CCeEEEECCCC---CChhHHHHHHHHHHh-CCeEEEEcCC----CCCCCCCCccccccccccCCHHHHHHHHHHHHHH--
Confidence 37899999943 2333444444 2232 3589999999 4444332110 11234555655444433332
Q ss_pred hhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 95 HFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 95 ~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
++ .+++.++|||+||.+++.++..
T Consensus 99 -l~--~~~~~lvGhS~Gg~va~~~a~~ 122 (294)
T PLN02824 99 -VV--GDPAFVICNSVGGVVGLQAAVD 122 (294)
T ss_pred -hc--CCCeEEEEeCHHHHHHHHHHHh
Confidence 23 3789999999999999998873
No 71
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.57 E-value=1.1e-06 Score=63.66 Aligned_cols=87 Identities=16% Similarity=0.135 Sum_probs=51.8
Q ss_pred eEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCCC
Q psy13951 21 SVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDP 100 (130)
Q Consensus 21 Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~ 100 (130)
+.||++||+.... ............++.|+.+|+| |++.+.. +.......++|..+.+..+.+. ++ .
T Consensus 28 ~~lvllHG~~~~~---~~~~~~~~~~~~~~~vi~~D~~----G~G~S~~-~~~~~~~~~~~~~~dl~~l~~~---l~--~ 94 (306)
T TIGR01249 28 KPVVFLHGGPGSG---TDPGCRRFFDPETYRIVLFDQR----GCGKSTP-HACLEENTTWDLVADIEKLREK---LG--I 94 (306)
T ss_pred CEEEEECCCCCCC---CCHHHHhccCccCCEEEEECCC----CCCCCCC-CCCcccCCHHHHHHHHHHHHHH---cC--C
Confidence 4579999964322 1111112233458999999999 3333322 1111223445555555544433 22 4
Q ss_pred CCeEEEEcChhHHHHHHHHh
Q psy13951 101 TSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~ 120 (130)
+++.++|+|+||.+++.++.
T Consensus 95 ~~~~lvG~S~GG~ia~~~a~ 114 (306)
T TIGR01249 95 KNWLVFGGSWGSTLALAYAQ 114 (306)
T ss_pred CCEEEEEECHHHHHHHHHHH
Confidence 68999999999999999875
No 72
>KOG4391|consensus
Probab=98.56 E-value=6.8e-08 Score=66.76 Aligned_cols=94 Identities=20% Similarity=0.246 Sum_probs=68.1
Q ss_pred CCCceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhh
Q psy13951 17 YRRHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHF 96 (130)
Q Consensus 17 ~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~ 96 (130)
...+|.++|+|+-+-..|.+-.- ...+-...++.|+.++|| |++.+.+.|...+- ..|..++++|+.+...
T Consensus 75 E~S~pTlLyfh~NAGNmGhr~~i-~~~fy~~l~mnv~ivsYR----GYG~S~GspsE~GL--~lDs~avldyl~t~~~-- 145 (300)
T KOG4391|consen 75 ESSRPTLLYFHANAGNMGHRLPI-ARVFYVNLKMNVLIVSYR----GYGKSEGSPSEEGL--KLDSEAVLDYLMTRPD-- 145 (300)
T ss_pred cCCCceEEEEccCCCcccchhhH-HHHHHHHcCceEEEEEee----ccccCCCCccccce--eccHHHHHHHHhcCcc--
Confidence 44789999999966555554432 222556679999999999 55555544333332 3499999999987543
Q ss_pred CCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 97 GGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 97 ~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.|..+|++.|.|.||..+..++.
T Consensus 146 -~dktkivlfGrSlGGAvai~las 168 (300)
T KOG4391|consen 146 -LDKTKIVLFGRSLGGAVAIHLAS 168 (300)
T ss_pred -CCcceEEEEecccCCeeEEEeec
Confidence 47899999999999998887775
No 73
>KOG1455|consensus
Probab=98.55 E-value=8.4e-07 Score=63.89 Aligned_cols=94 Identities=17% Similarity=0.199 Sum_probs=59.2
Q ss_pred CCceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCC--CCCCCCccHHHHHHHHHHHHHhhh
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVG--SSTVTNFGIMDQVAALQWIKDNIE 94 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~--~~~~~~~~~~D~~~a~~~l~~~~~ 94 (130)
+++-.|+++||.| .-....+...+ ..+..|+.|...||+ |++.+... .-..+..-+.|+..-++.++...+
T Consensus 52 ~pr~lv~~~HG~g--~~~s~~~~~~a~~l~~~g~~v~a~D~~----GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e 125 (313)
T KOG1455|consen 52 EPRGLVFLCHGYG--EHSSWRYQSTAKRLAKSGFAVYAIDYE----GHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREE 125 (313)
T ss_pred CCceEEEEEcCCc--ccchhhHHHHHHHHHhCCCeEEEeecc----CCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccc
Confidence 5677999999933 11223444444 556689999999999 44444332 222334445555555554443332
Q ss_pred hhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 95 HFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 95 ~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
. .-.-.+++|||+||.+++.++.
T Consensus 126 ~---~~lp~FL~GeSMGGAV~Ll~~~ 148 (313)
T KOG1455|consen 126 N---KGLPRFLFGESMGGAVALLIAL 148 (313)
T ss_pred c---CCCCeeeeecCcchHHHHHHHh
Confidence 2 1245789999999999999987
No 74
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.55 E-value=7e-07 Score=67.94 Aligned_cols=94 Identities=17% Similarity=0.247 Sum_probs=52.4
Q ss_pred CCceEEEEEeCCCccc-CCCCcchh-HH--Hhh-cCCeEEEeeccccccccCCCCCCCCCCCCC-ccHHHHHHHHHHHHH
Q psy13951 18 RRHSVLVIIHGESYSF-GSGNIYDG-FV--LAS-YANMVVVTFNFRLGILGFLRPGVGSSTVTN-FGIMDQVAALQWIKD 91 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~-g~~~~~~~-~~--~~~-~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~-~~~~D~~~a~~~l~~ 91 (130)
...|.+|+||| |.. +....+.. +. +.. ..++.|+++|.+-. ..+......... .--.++.+.++++.+
T Consensus 39 ~~~ptvIlIHG--~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~----g~s~y~~a~~~t~~vg~~la~lI~~L~~ 112 (442)
T TIGR03230 39 HETKTFIVIHG--WTVTGMFESWVPKLVAALYEREPSANVIVVDWLSR----AQQHYPTSAAYTKLVGKDVAKFVNWMQE 112 (442)
T ss_pred CCCCeEEEECC--CCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCc----CCCCCccccccHHHHHHHHHHHHHHHHH
Confidence 35689999999 322 11122222 22 222 23699999999842 111110111111 111233344455433
Q ss_pred hhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 92 NIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 92 ~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.++.+.+++.|+|||+||+++..++.
T Consensus 113 ---~~gl~l~~VhLIGHSLGAhIAg~ag~ 138 (442)
T TIGR03230 113 ---EFNYPWDNVHLLGYSLGAHVAGIAGS 138 (442)
T ss_pred ---hhCCCCCcEEEEEECHHHHHHHHHHH
Confidence 34567899999999999999999875
No 75
>PLN02872 triacylglycerol lipase
Probab=98.54 E-value=6.8e-07 Score=67.33 Aligned_cols=98 Identities=11% Similarity=0.103 Sum_probs=58.1
Q ss_pred CceEEEEEeCCCcccCCC---CcchhHH-HhhcCCeEEEeeccccccccCCCCCCC--CC----CCC-CccHHHHHHHHH
Q psy13951 19 RHSVLVIIHGESYSFGSG---NIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVG--SS----TVT-NFGIMDQVAALQ 87 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~---~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~--~~----~~~-~~~~~D~~~a~~ 87 (130)
+.|+|+++||.+...... ....... ..+++|+.|..+|.|-...++...... .. ..+ .....|+.++++
T Consensus 73 ~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id 152 (395)
T PLN02872 73 RGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIH 152 (395)
T ss_pred CCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHH
Confidence 458899999954322211 1112232 345679999999999533222211111 11 111 122468888888
Q ss_pred HHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhCC
Q psy13951 88 WIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 88 ~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
++.+. +.+++.++|||+||.++..++..|
T Consensus 153 ~i~~~------~~~~v~~VGhS~Gg~~~~~~~~~p 181 (395)
T PLN02872 153 YVYSI------TNSKIFIVGHSQGTIMSLAALTQP 181 (395)
T ss_pred HHHhc------cCCceEEEEECHHHHHHHHHhhCh
Confidence 88643 236899999999999988655433
No 76
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.53 E-value=1e-06 Score=64.03 Aligned_cols=92 Identities=20% Similarity=0.240 Sum_probs=57.9
Q ss_pred eEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCC
Q psy13951 21 SVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGD 99 (130)
Q Consensus 21 Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d 99 (130)
.+||.+||.+ .....|.... .....|+.|+..|.| |++.+.. ..........|....++.+.+.+..- .-
T Consensus 35 g~Vvl~HG~~---Eh~~ry~~la~~l~~~G~~V~~~D~R----GhG~S~r-~~rg~~~~f~~~~~dl~~~~~~~~~~-~~ 105 (298)
T COG2267 35 GVVVLVHGLG---EHSGRYEELADDLAARGFDVYALDLR----GHGRSPR-GQRGHVDSFADYVDDLDAFVETIAEP-DP 105 (298)
T ss_pred cEEEEecCch---HHHHHHHHHHHHHHhCCCEEEEecCC----CCCCCCC-CCcCCchhHHHHHHHHHHHHHHHhcc-CC
Confidence 7999999943 2233444444 556689999999999 4444431 01111122455555555444444321 12
Q ss_pred CCCeEEEEcChhHHHHHHHHhC
Q psy13951 100 PTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
..+++|+|||+||.+++..+..
T Consensus 106 ~~p~~l~gHSmGg~Ia~~~~~~ 127 (298)
T COG2267 106 GLPVFLLGHSMGGLIALLYLAR 127 (298)
T ss_pred CCCeEEEEeCcHHHHHHHHHHh
Confidence 4789999999999999998864
No 77
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.52 E-value=5.4e-08 Score=67.25 Aligned_cols=99 Identities=16% Similarity=0.124 Sum_probs=57.3
Q ss_pred CCceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCC-CCC------C-CCccHHHHHHHHHH
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVG-SST------V-TNFGIMDQVAALQW 88 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~-~~~------~-~~~~~~D~~~a~~~ 88 (130)
++.|+||++|+ ..|........+ ..+++|+.|+.||+--+.......... ... . ......|+.++++|
T Consensus 12 ~~~~~Vvv~~d---~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~ 88 (218)
T PF01738_consen 12 GPRPAVVVIHD---IFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDY 88 (218)
T ss_dssp SSEEEEEEE-B---TTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcC---CCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 57899999999 333333333444 334579999999975331100000000 000 0 01223455677777
Q ss_pred HHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhCC
Q psy13951 89 IKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 89 l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
+++.. .++.+||+++|+|.||.+++.++...
T Consensus 89 l~~~~---~~~~~kig~vGfc~GG~~a~~~a~~~ 119 (218)
T PF01738_consen 89 LRAQP---EVDPGKIGVVGFCWGGKLALLLAARD 119 (218)
T ss_dssp HHCTT---TCEEEEEEEEEETHHHHHHHHHHCCT
T ss_pred HHhcc---ccCCCcEEEEEEecchHHhhhhhhhc
Confidence 76543 25789999999999999999988754
No 78
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.52 E-value=7.5e-07 Score=60.95 Aligned_cols=80 Identities=16% Similarity=0.218 Sum_probs=48.0
Q ss_pred eEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCCC
Q psy13951 21 SVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDP 100 (130)
Q Consensus 21 Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~ 100 (130)
|.||++||.+ ++...+....-.-..++.|+.+|+| |+..+.. .....++|.. +.+.+.. .
T Consensus 5 ~~iv~~HG~~---~~~~~~~~~~~~l~~~~~vi~~d~~----G~G~s~~----~~~~~~~~~~---~~~~~~~------~ 64 (245)
T TIGR01738 5 VHLVLIHGWG---MNAEVFRCLDEELSAHFTLHLVDLP----GHGRSRG----FGPLSLADAA---EAIAAQA------P 64 (245)
T ss_pred ceEEEEcCCC---CchhhHHHHHHhhccCeEEEEecCC----cCccCCC----CCCcCHHHHH---HHHHHhC------C
Confidence 6799999932 2333444444122347999999999 3333221 1122233333 3333221 2
Q ss_pred CCeEEEEcChhHHHHHHHHh
Q psy13951 101 TSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~ 120 (130)
+++.++|||+||.+++.++.
T Consensus 65 ~~~~lvG~S~Gg~~a~~~a~ 84 (245)
T TIGR01738 65 DPAIWLGWSLGGLVALHIAA 84 (245)
T ss_pred CCeEEEEEcHHHHHHHHHHH
Confidence 68999999999999998875
No 79
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.50 E-value=1.8e-06 Score=63.62 Aligned_cols=88 Identities=20% Similarity=0.124 Sum_probs=52.0
Q ss_pred CceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCC
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGG 98 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~ 98 (130)
+.|.||++||.+ ++...+....-.-..++.|+.+|+|- +..+... .....+.+..+.+..+. ..+
T Consensus 130 ~~~~vl~~HG~~---~~~~~~~~~~~~l~~~~~v~~~d~~g----~G~s~~~---~~~~~~~~~~~~~~~~~---~~~-- 194 (371)
T PRK14875 130 DGTPVVLIHGFG---GDLNNWLFNHAALAAGRPVIALDLPG----HGASSKA---VGAGSLDELAAAVLAFL---DAL-- 194 (371)
T ss_pred CCCeEEEECCCC---CccchHHHHHHHHhcCCEEEEEcCCC----CCCCCCC---CCCCCHHHHHHHHHHHH---Hhc--
Confidence 357899999832 23333433331122359999999983 2222111 11223445544444333 332
Q ss_pred CCCCeEEEEcChhHHHHHHHHhC
Q psy13951 99 DPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 99 d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
++++++++|||+||.++..++..
T Consensus 195 ~~~~~~lvG~S~Gg~~a~~~a~~ 217 (371)
T PRK14875 195 GIERAHLVGHSMGGAVALRLAAR 217 (371)
T ss_pred CCccEEEEeechHHHHHHHHHHh
Confidence 45789999999999999988763
No 80
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.49 E-value=1.5e-06 Score=62.41 Aligned_cols=86 Identities=17% Similarity=0.212 Sum_probs=52.3
Q ss_pred ceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCC
Q psy13951 20 HSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGG 98 (130)
Q Consensus 20 ~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~ 98 (130)
.|.||++||.+ ++...+.... ...+.+ .|+++|.| |++.+.. +.. ...+++..+.+.-+.+ .++
T Consensus 27 g~~vvllHG~~---~~~~~w~~~~~~L~~~~-~via~D~~----G~G~S~~-~~~--~~~~~~~a~dl~~ll~---~l~- 91 (295)
T PRK03592 27 GDPIVFLHGNP---TSSYLWRNIIPHLAGLG-RCLAPDLI----GMGASDK-PDI--DYTFADHARYLDAWFD---ALG- 91 (295)
T ss_pred CCEEEEECCCC---CCHHHHHHHHHHHhhCC-EEEEEcCC----CCCCCCC-CCC--CCCHHHHHHHHHHHHH---HhC-
Confidence 47899999943 3344444444 333344 99999999 4444432 111 2334444433333322 223
Q ss_pred CCCCeEEEEcChhHHHHHHHHhC
Q psy13951 99 DPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 99 d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.+++.++|||+||.+++.++..
T Consensus 92 -~~~~~lvGhS~Gg~ia~~~a~~ 113 (295)
T PRK03592 92 -LDDVVLVGHDWGSALGFDWAAR 113 (295)
T ss_pred -CCCeEEEEECHHHHHHHHHHHh
Confidence 3689999999999999998863
No 81
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.48 E-value=4.8e-07 Score=64.36 Aligned_cols=102 Identities=17% Similarity=0.170 Sum_probs=61.1
Q ss_pred CCceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCC---C---------------CCccH
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSST---V---------------TNFGI 79 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~---~---------------~~~~~ 79 (130)
.+.|.||.+|| |. |....+.........|+.++..+-|-...........+.. + +..-.
T Consensus 81 ~~~P~vV~fhG--Y~-g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~ 157 (321)
T COG3458 81 GKLPAVVQFHG--YG-GRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVF 157 (321)
T ss_pred CccceEEEEee--cc-CCCCCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeeh
Confidence 68899999999 21 2222333333233469999999999532222111111211 1 11123
Q ss_pred HHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHH-hCCCCC
Q psy13951 80 MDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLM-LSPLLS 125 (130)
Q Consensus 80 ~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~-~~~~~~ 125 (130)
.|...+++-+. +-..+|.+||.+.|.|.||.+++.++ ++|+++
T Consensus 158 ~D~~~ave~~~---sl~~vde~Ri~v~G~SqGGglalaaaal~~rik 201 (321)
T COG3458 158 LDAVRAVEILA---SLDEVDEERIGVTGGSQGGGLALAAAALDPRIK 201 (321)
T ss_pred HHHHHHHHHHh---ccCccchhheEEeccccCchhhhhhhhcChhhh
Confidence 45555555443 33457999999999999999998876 455544
No 82
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.48 E-value=2e-06 Score=63.84 Aligned_cols=84 Identities=13% Similarity=0.232 Sum_probs=50.4
Q ss_pred eEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHH-HHHHHHhhhhhCC
Q psy13951 21 SVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAA-LQWIKDNIEHFGG 98 (130)
Q Consensus 21 Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a-~~~l~~~~~~~~~ 98 (130)
|.||++||.+ ++...|.... ... .++.|+++|+| |++.+..... ....+++..+. .+++. .++
T Consensus 89 p~lvllHG~~---~~~~~w~~~~~~L~-~~~~via~Dl~----G~G~S~~~~~--~~~~~~~~a~~l~~~l~----~l~- 153 (360)
T PLN02679 89 PPVLLVHGFG---ASIPHWRRNIGVLA-KNYTVYAIDLL----GFGASDKPPG--FSYTMETWAELILDFLE----EVV- 153 (360)
T ss_pred CeEEEECCCC---CCHHHHHHHHHHHh-cCCEEEEECCC----CCCCCCCCCC--ccccHHHHHHHHHHHHH----Hhc-
Confidence 6799999943 2333444443 233 47999999999 4444432111 12334444332 23332 222
Q ss_pred CCCCeEEEEcChhHHHHHHHHh
Q psy13951 99 DPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 99 d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.+++.|+|||+||.++..++.
T Consensus 154 -~~~~~lvGhS~Gg~ia~~~a~ 174 (360)
T PLN02679 154 -QKPTVLIGNSVGSLACVIAAS 174 (360)
T ss_pred -CCCeEEEEECHHHHHHHHHHH
Confidence 468999999999999887764
No 83
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.47 E-value=1.8e-06 Score=63.73 Aligned_cols=99 Identities=18% Similarity=0.050 Sum_probs=64.2
Q ss_pred CCceEEEEEeC-CCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCC-C----CCCCCccHHHHHHHHHHHH
Q psy13951 18 RRHSVLVIIHG-ESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVG-S----STVTNFGIMDQVAALQWIK 90 (130)
Q Consensus 18 ~~~Pvvv~iHG-Gg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~-~----~~~~~~~~~D~~~a~~~l~ 90 (130)
.+.|+|++-|| |+. ...+.... ..++.|++|..+++.-...+..+.... + ...+-....|+...+.+|.
T Consensus 69 ~~~PlvvlshG~Gs~----~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~ 144 (365)
T COG4188 69 YLLPLVVLSHGSGSY----VTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALL 144 (365)
T ss_pred CcCCeEEecCCCCCC----ccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHH
Confidence 47899999999 333 33444444 445689999999998533332221111 1 1112233457777777777
Q ss_pred Hh---h-hhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 91 DN---I-EHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 91 ~~---~-~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+. - -.-.+|+.||.+.|||.||+.++.++.
T Consensus 145 ~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laG 178 (365)
T COG4188 145 QLTASPALAGRLDPQRVGVLGHSFGGYTAMELAG 178 (365)
T ss_pred HhhcCcccccccCccceEEEecccccHHHHHhcc
Confidence 65 1 122478999999999999999998864
No 84
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.46 E-value=2e-06 Score=62.71 Aligned_cols=92 Identities=23% Similarity=0.333 Sum_probs=60.5
Q ss_pred CCCCceEEEEEeCCCcccCCCC-cch-hHH-HhhcCCeEEEeeccccccccCCCCCCC-CCCCCCccHHHHHHHHHHHHH
Q psy13951 16 TYRRHSVLVIIHGESYSFGSGN-IYD-GFV-LASYANMVVVTFNFRLGILGFLRPGVG-SSTVTNFGIMDQVAALQWIKD 91 (130)
Q Consensus 16 ~~~~~Pvvv~iHGGg~~~g~~~-~~~-~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~-~~~~~~~~~~D~~~a~~~l~~ 91 (130)
...+.|.||.+|| ..|+.. .|- .+. .+.++|+.+|.++.|-. ...... +..-..-..+|+...++|++.
T Consensus 71 ~~~~~P~vVl~HG---L~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgc----s~~~n~~p~~yh~G~t~D~~~~l~~l~~ 143 (345)
T COG0429 71 RAAKKPLVVLFHG---LEGSSNSPYARGLMRALSRRGWLVVVFHFRGC----SGEANTSPRLYHSGETEDIRFFLDWLKA 143 (345)
T ss_pred cccCCceEEEEec---cCCCCcCHHHHHHHHHHHhcCCeEEEEecccc----cCCcccCcceecccchhHHHHHHHHHHH
Confidence 3456699999999 344433 332 222 55678999999999943 222221 222233334799999999987
Q ss_pred hhhhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 92 NIEHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 92 ~~~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
.. -+.++..+|.|.||+|.+..+
T Consensus 144 ~~-----~~r~~~avG~SLGgnmLa~yl 166 (345)
T COG0429 144 RF-----PPRPLYAVGFSLGGNMLANYL 166 (345)
T ss_pred hC-----CCCceEEEEecccHHHHHHHH
Confidence 43 368999999999996655544
No 85
>KOG3101|consensus
Probab=98.44 E-value=6.6e-07 Score=61.65 Aligned_cols=106 Identities=21% Similarity=0.217 Sum_probs=60.7
Q ss_pred CCCCCCCCCCceEEEEEeCCCcccCCCC---cchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCC-----------
Q psy13951 10 SPDSSRTYRRHSVLVIIHGESYSFGSGN---IYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTV----------- 74 (130)
Q Consensus 10 ~p~~~~~~~~~Pvvv~iHGGg~~~g~~~---~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~----------- 74 (130)
-|+.....++.|+++|+-| .....+ ....++ .+++.|++||.+|-.- .|.--.+++....
T Consensus 34 lPp~a~~~k~~P~lf~LSG---LTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSP--RG~~v~g~~eswDFG~GAGFYvnA 108 (283)
T KOG3101|consen 34 LPPDAPRGKRCPVLFYLSG---LTCTHENFIEKSGFQQQASKHGLAVVAPDTSP--RGVEVAGDDESWDFGQGAGFYVNA 108 (283)
T ss_pred cCCCcccCCcCceEEEecC---CcccchhhHhhhhHHHhHhhcCeEEECCCCCC--CccccCCCcccccccCCceeEEec
Confidence 3445556677999999999 222222 122333 7788999999998642 2211111100000
Q ss_pred CCccHHHHHHHHHHHHHhh------hhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 75 TNFGIMDQVAALQWIKDNI------EHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 75 ~~~~~~D~~~a~~~l~~~~------~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
....-..-.++++|+.+.. ....+|+.++.|.|||||||=|+...+
T Consensus 109 t~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~L 160 (283)
T KOG3101|consen 109 TQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYL 160 (283)
T ss_pred ccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEE
Confidence 0001112234555555433 234689999999999999998776544
No 86
>KOG1838|consensus
Probab=98.43 E-value=2.6e-06 Score=63.85 Aligned_cols=92 Identities=21% Similarity=0.176 Sum_probs=63.1
Q ss_pred CCceEEEEEeCCCcccCCCCcc-hhHH-HhhcCCeEEEeeccccccccCCCCCCC-CCCCCCccHHHHHHHHHHHHHhhh
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIY-DGFV-LASYANMVVVTFNFRLGILGFLRPGVG-SSTVTNFGIMDQVAALQWIKDNIE 94 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~-~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~-~~~~~~~~~~D~~~a~~~l~~~~~ 94 (130)
...|+||++|| ...++.+.| ..++ .+.+.|+.+|.+|.|-. ...... +..-.-...+|...+++++++...
T Consensus 123 ~~~P~vvilpG--ltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~----~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P 196 (409)
T KOG1838|consen 123 GTDPIVVILPG--LTGGSHESYVRHLVHEAQRKGYRVVVFNHRGL----GGSKLTTPRLFTAGWTEDLREVVNHIKKRYP 196 (409)
T ss_pred CCCcEEEEecC--CCCCChhHHHHHHHHHHHhCCcEEEEECCCCC----CCCccCCCceeecCCHHHHHHHHHHHHHhCC
Confidence 45699999999 223333332 2333 77889999999999942 222211 221122235799999999998663
Q ss_pred hhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 95 HFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 95 ~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
..++..+|.|+||+|....+.
T Consensus 197 -----~a~l~avG~S~Gg~iL~nYLG 217 (409)
T KOG1838|consen 197 -----QAPLFAVGFSMGGNILTNYLG 217 (409)
T ss_pred -----CCceEEEEecchHHHHHHHhh
Confidence 357999999999999988775
No 87
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.43 E-value=2.2e-06 Score=63.41 Aligned_cols=89 Identities=11% Similarity=0.062 Sum_probs=52.7
Q ss_pred CceEEEEEeC---CCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCC-CccHHHHHHHHHHHHHhh
Q psy13951 19 RHSVLVIIHG---ESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVT-NFGIMDQVAALQWIKDNI 93 (130)
Q Consensus 19 ~~Pvvv~iHG---Gg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~-~~~~~D~~~a~~~l~~~~ 93 (130)
+.| |+++|| .+|.....+ ..... ...+.|+.|+.+|+|-. ..+. ..... .....|+.++++++.+..
T Consensus 62 ~~p-vl~v~~~~~~~~~~d~~~-~~~~~~~L~~~G~~V~~~D~~g~----g~s~--~~~~~~d~~~~~~~~~v~~l~~~~ 133 (350)
T TIGR01836 62 KTP-LLIVYALVNRPYMLDLQE-DRSLVRGLLERGQDVYLIDWGYP----DRAD--RYLTLDDYINGYIDKCVDYICRTS 133 (350)
T ss_pred CCc-EEEeccccccceeccCCC-CchHHHHHHHCCCeEEEEeCCCC----CHHH--hcCCHHHHHHHHHHHHHHHHHHHh
Confidence 345 888887 223222222 22333 55668999999999832 1100 00111 111234566778777653
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
..++|.++|||+||.+++.++.
T Consensus 134 -----~~~~i~lvGhS~GG~i~~~~~~ 155 (350)
T TIGR01836 134 -----KLDQISLLGICQGGTFSLCYAA 155 (350)
T ss_pred -----CCCcccEEEECHHHHHHHHHHH
Confidence 2468999999999999988765
No 88
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.43 E-value=2.9e-06 Score=59.65 Aligned_cols=81 Identities=15% Similarity=0.223 Sum_probs=49.1
Q ss_pred eEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCCC
Q psy13951 21 SVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDP 100 (130)
Q Consensus 21 Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~ 100 (130)
|.||++||.+ ++...|....-.-...+.|+.+|+| |++.+.. +. ...+++..+ .+.+ + ..
T Consensus 14 ~~ivllHG~~---~~~~~w~~~~~~L~~~~~vi~~Dl~----G~G~S~~-~~---~~~~~~~~~---~l~~----~--~~ 73 (256)
T PRK10349 14 VHLVLLHGWG---LNAEVWRCIDEELSSHFTLHLVDLP----GFGRSRG-FG---ALSLADMAE---AVLQ----Q--AP 73 (256)
T ss_pred CeEEEECCCC---CChhHHHHHHHHHhcCCEEEEecCC----CCCCCCC-CC---CCCHHHHHH---HHHh----c--CC
Confidence 5699999943 3334444444222246999999999 3333321 11 123334332 2322 2 24
Q ss_pred CCeEEEEcChhHHHHHHHHhC
Q psy13951 101 TSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~~ 121 (130)
+++.++|||+||.++..++..
T Consensus 74 ~~~~lvGhS~Gg~ia~~~a~~ 94 (256)
T PRK10349 74 DKAIWLGWSLGGLVASQIALT 94 (256)
T ss_pred CCeEEEEECHHHHHHHHHHHh
Confidence 789999999999999998863
No 89
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.42 E-value=1.4e-06 Score=64.84 Aligned_cols=101 Identities=17% Similarity=0.185 Sum_probs=51.2
Q ss_pred CCCceEEEEEeCCCc----ccCCCC-------cc----hhHH-HhhcCCeEEEeeccccccccCCCCCCC----CCCCCC
Q psy13951 17 YRRHSVLVIIHGESY----SFGSGN-------IY----DGFV-LASYANMVVVTFNFRLGILGFLRPGVG----SSTVTN 76 (130)
Q Consensus 17 ~~~~Pvvv~iHGGg~----~~g~~~-------~~----~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~----~~~~~~ 76 (130)
+.+.|+||.+||=|. ..|... .+ .... ..+++||+|+++|-.. ++..... ......
T Consensus 112 ~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g----~GER~~~e~~~~~~~~~ 187 (390)
T PF12715_consen 112 KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALG----FGERGDMEGAAQGSNYD 187 (390)
T ss_dssp -S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TT----SGGG-SSCCCTTTTS--
T ss_pred CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEcccc----ccccccccccccccchh
Confidence 678899999999221 111100 01 1112 4456899999999662 2222211 000000
Q ss_pred -----------------ccHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh-CCCC
Q psy13951 77 -----------------FGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML-SPLL 124 (130)
Q Consensus 77 -----------------~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~-~~~~ 124 (130)
....|...+++||...- .+|++||+++|+|+||+.++++++ ++++
T Consensus 188 ~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slp---eVD~~RIG~~GfSmGg~~a~~LaALDdRI 250 (390)
T PF12715_consen 188 CQALARNLLMLGRSLAGLMAWDDMRALDFLASLP---EVDPDRIGCMGFSMGGYRAWWLAALDDRI 250 (390)
T ss_dssp HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-T---TEEEEEEEEEEEGGGHHHHHHHHHH-TT-
T ss_pred HHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCc---ccCccceEEEeecccHHHHHHHHHcchhh
Confidence 01123444566665432 479999999999999999999875 4444
No 90
>PRK05855 short chain dehydrogenase; Validated
Probab=98.42 E-value=3.1e-06 Score=65.77 Aligned_cols=90 Identities=19% Similarity=0.319 Sum_probs=50.9
Q ss_pred ceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCC
Q psy13951 20 HSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGG 98 (130)
Q Consensus 20 ~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~ 98 (130)
.|.||++||.+ ++...|.... .. ..++.|+.+|+| |++.+... .......+++..+-+.-+.+. .+.
T Consensus 25 ~~~ivllHG~~---~~~~~w~~~~~~L-~~~~~Vi~~D~~----G~G~S~~~-~~~~~~~~~~~a~dl~~~i~~---l~~ 92 (582)
T PRK05855 25 RPTVVLVHGYP---DNHEVWDGVAPLL-ADRFRVVAYDVR----GAGRSSAP-KRTAAYTLARLADDFAAVIDA---VSP 92 (582)
T ss_pred CCeEEEEcCCC---chHHHHHHHHHHh-hcceEEEEecCC----CCCCCCCC-CcccccCHHHHHHHHHHHHHH---hCC
Confidence 58999999953 2223344333 33 468999999999 34433321 111122343443333322222 221
Q ss_pred CCCCeEEEEcChhHHHHHHHHhCC
Q psy13951 99 DPTSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 99 d~~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
...+.|+|||+||.++..++..+
T Consensus 93 -~~~~~lvGhS~Gg~~a~~~a~~~ 115 (582)
T PRK05855 93 -DRPVHLLAHDWGSIQGWEAVTRP 115 (582)
T ss_pred -CCcEEEEecChHHHHHHHHHhCc
Confidence 23499999999998887666543
No 91
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.38 E-value=3.2e-06 Score=68.23 Aligned_cols=100 Identities=14% Similarity=0.109 Sum_probs=55.3
Q ss_pred CceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCC-------CC-CC------------CCCCc
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPG-------VG-SS------------TVTNF 77 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~-------~~-~~------------~~~~~ 77 (130)
..|+||++|| ..+....+.... ...+.|+.|+.+|+|.-........ .. .. .....
T Consensus 448 g~P~VVllHG---~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ 524 (792)
T TIGR03502 448 GWPVVIYQHG---ITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQ 524 (792)
T ss_pred CCcEEEEeCC---CCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHH
Confidence 4689999999 334444555554 3345799999999985311101100 00 00 01122
Q ss_pred cHHHHHHHHHHHHH---hhhh---h-CCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 78 GIMDQVAALQWIKD---NIEH---F-GGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 78 ~~~D~~~a~~~l~~---~~~~---~-~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.+.|+......+.. ...+ + ..+..++.++|||+||.+...++..
T Consensus 525 ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 525 SILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 22344333333320 0001 0 1356799999999999999998864
No 92
>PRK07581 hypothetical protein; Validated
Probab=98.37 E-value=5.3e-06 Score=60.89 Aligned_cols=91 Identities=14% Similarity=0.100 Sum_probs=50.2
Q ss_pred CceEEEEEeCCCcccCCCCcchhH----HHhhcCCeEEEeeccccccccCCCCCCCCCC--CCC------ccH-HHHHHH
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGF----VLASYANMVVVTFNFRLGILGFLRPGVGSST--VTN------FGI-MDQVAA 85 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~----~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~--~~~------~~~-~D~~~a 85 (130)
+.|+|++.||+++.... +... ......++.|+++|.| |++.+...... .+. ..+ +|+...
T Consensus 40 ~~~~vll~~~~~~~~~~---~~~~~~~~~~l~~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (339)
T PRK07581 40 KDNAILYPTWYSGTHQD---NEWLIGPGRALDPEKYFIIIPNMF----GNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQ 112 (339)
T ss_pred CCCEEEEeCCCCCCccc---chhhccCCCccCcCceEEEEecCC----CCCCCCCCCCCCCCCCCCCCCceeHHHHHHHH
Confidence 34778888876653322 2111 1222358999999999 34433321111 111 113 333332
Q ss_pred HHHHHHhhhhhCCCCCC-eEEEEcChhHHHHHHHHhC
Q psy13951 86 LQWIKDNIEHFGGDPTS-VTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 86 ~~~l~~~~~~~~~d~~r-i~l~G~SaGg~~a~~~~~~ 121 (130)
...+.+. ++ .++ ..|+|+|+||.++..++..
T Consensus 113 ~~~l~~~---lg--i~~~~~lvG~S~GG~va~~~a~~ 144 (339)
T PRK07581 113 HRLLTEK---FG--IERLALVVGWSMGAQQTYHWAVR 144 (339)
T ss_pred HHHHHHH---hC--CCceEEEEEeCHHHHHHHHHHHH
Confidence 3334332 33 368 4789999999999999873
No 93
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.36 E-value=2.9e-06 Score=64.26 Aligned_cols=97 Identities=11% Similarity=0.131 Sum_probs=52.9
Q ss_pred CCCceEEEEEeCCCcccCCCCcchhHH-Hhhc---CCeEEEeeccccccccCCCCCCCCCCCCCccHHHH--HHHHHHHH
Q psy13951 17 YRRHSVLVIIHGESYSFGSGNIYDGFV-LASY---ANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQ--VAALQWIK 90 (130)
Q Consensus 17 ~~~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~---~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~--~~a~~~l~ 90 (130)
.+++|||+++||..|..... ....+. +.++ ..+++|.++..-. .... .+........+. .+.+-|+.
T Consensus 206 ~~~~PvlyllDG~~w~~~~~-~~~~ld~li~~g~i~P~ivV~id~~~~---~~R~---~el~~~~~f~~~l~~eLlP~I~ 278 (411)
T PRK10439 206 PEERPLAILLDGQFWAESMP-VWPALDSLTHRGQLPPAVYLLIDAIDT---THRS---QELPCNADFWLAVQQELLPQVR 278 (411)
T ss_pred CCCCCEEEEEECHHhhhcCC-HHHHHHHHHHcCCCCceEEEEECCCCc---cccc---ccCCchHHHHHHHHHHHHHHHH
Confidence 45789999999988864222 111122 2222 1356777764210 0000 111111112221 13344554
Q ss_pred HhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 91 DNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 91 ~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
++. ....|+++.+|+|.|+||..++.+++.
T Consensus 279 ~~y-~~~~d~~~~~IaG~S~GGl~AL~~al~ 308 (411)
T PRK10439 279 AIA-PFSDDADRTVVAGQSFGGLAALYAGLH 308 (411)
T ss_pred HhC-CCCCCccceEEEEEChHHHHHHHHHHh
Confidence 432 234588999999999999999999874
No 94
>PLN02578 hydrolase
Probab=98.33 E-value=5.9e-06 Score=61.22 Aligned_cols=84 Identities=15% Similarity=0.199 Sum_probs=48.8
Q ss_pred eEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHH-HHHHHHHHHhhhhhCC
Q psy13951 21 SVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQ-VAALQWIKDNIEHFGG 98 (130)
Q Consensus 21 Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~-~~a~~~l~~~~~~~~~ 98 (130)
|.||++||-+ ++...+.... ... .++.|+.+|+| |++.+.. +.. .....+. .++.+++.+..
T Consensus 87 ~~vvliHG~~---~~~~~w~~~~~~l~-~~~~v~~~D~~----G~G~S~~-~~~--~~~~~~~a~~l~~~i~~~~----- 150 (354)
T PLN02578 87 LPIVLIHGFG---ASAFHWRYNIPELA-KKYKVYALDLL----GFGWSDK-ALI--EYDAMVWRDQVADFVKEVV----- 150 (354)
T ss_pred CeEEEECCCC---CCHHHHHHHHHHHh-cCCEEEEECCC----CCCCCCC-ccc--ccCHHHHHHHHHHHHHHhc-----
Confidence 4579999932 2233333333 222 46999999999 3333322 111 1223332 23334443321
Q ss_pred CCCCeEEEEcChhHHHHHHHHhC
Q psy13951 99 DPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 99 d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.++++++|||+||.++..++..
T Consensus 151 -~~~~~lvG~S~Gg~ia~~~A~~ 172 (354)
T PLN02578 151 -KEPAVLVGNSLGGFTALSTAVG 172 (354)
T ss_pred -cCCeEEEEECHHHHHHHHHHHh
Confidence 3689999999999999998863
No 95
>PRK06489 hypothetical protein; Provisional
Probab=98.33 E-value=8.7e-06 Score=60.42 Aligned_cols=90 Identities=14% Similarity=0.260 Sum_probs=50.9
Q ss_pred ceEEEEEeCCCcccCCCCcch--hHH--H------hhcCCeEEEeeccccccccCCCCCCCCCC----CCCccHHHHHH-
Q psy13951 20 HSVLVIIHGESYSFGSGNIYD--GFV--L------ASYANMVVVTFNFRLGILGFLRPGVGSST----VTNFGIMDQVA- 84 (130)
Q Consensus 20 ~Pvvv~iHGGg~~~g~~~~~~--~~~--~------~~~~g~~vv~~~yrl~~~~~~~~~~~~~~----~~~~~~~D~~~- 84 (130)
.|.||++||.+.. ...+. .+. + ....++.|+++|+| |++.+...... .....++|..+
T Consensus 69 gpplvllHG~~~~---~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~----GhG~S~~p~~~~~~~~~~~~~~~~a~~ 141 (360)
T PRK06489 69 DNAVLVLHGTGGS---GKSFLSPTFAGELFGPGQPLDASKYFIILPDGI----GHGKSSKPSDGLRAAFPRYDYDDMVEA 141 (360)
T ss_pred CCeEEEeCCCCCc---hhhhccchhHHHhcCCCCcccccCCEEEEeCCC----CCCCCCCCCcCCCCCCCcccHHHHHHH
Confidence 4789999995432 11221 111 1 11357999999999 34333221110 01234555553
Q ss_pred HHHHHHHhhhhhCCCCCCeE-EEEcChhHHHHHHHHhC
Q psy13951 85 ALQWIKDNIEHFGGDPTSVT-LMGHGTGAASINFLMLS 121 (130)
Q Consensus 85 a~~~l~~~~~~~~~d~~ri~-l~G~SaGg~~a~~~~~~ 121 (130)
.+.++.+. ++ .+++. |+|+|+||.+++.++..
T Consensus 142 ~~~~l~~~---lg--i~~~~~lvG~SmGG~vAl~~A~~ 174 (360)
T PRK06489 142 QYRLVTEG---LG--VKHLRLILGTSMGGMHAWMWGEK 174 (360)
T ss_pred HHHHHHHh---cC--CCceeEEEEECHHHHHHHHHHHh
Confidence 23334332 23 35664 89999999999998863
No 96
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.31 E-value=7.8e-06 Score=63.06 Aligned_cols=88 Identities=13% Similarity=0.243 Sum_probs=53.4
Q ss_pred ceEEEEEeCCCcccCCCCcchhH--H-Hh--hcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHH-HHHHhh
Q psy13951 20 HSVLVIIHGESYSFGSGNIYDGF--V-LA--SYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQ-WIKDNI 93 (130)
Q Consensus 20 ~Pvvv~iHGGg~~~g~~~~~~~~--~-~~--~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~-~l~~~~ 93 (130)
.|.||++||.+ ++...|... . ++ .+.++.|+.+|+| |++.+.. +. .....+++..+.+. .+.+
T Consensus 201 k~~VVLlHG~~---~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~----G~G~S~~-p~-~~~ytl~~~a~~l~~~ll~-- 269 (481)
T PLN03087 201 KEDVLFIHGFI---SSSAFWTETLFPNFSDAAKSTYRLFAVDLL----GFGRSPK-PA-DSLYTLREHLEMIERSVLE-- 269 (481)
T ss_pred CCeEEEECCCC---ccHHHHHHHHHHHHHHHhhCCCEEEEECCC----CCCCCcC-CC-CCcCCHHHHHHHHHHHHHH--
Confidence 47899999953 233334321 1 22 2368999999999 4443322 11 12234555554442 3333
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.++ .+++.++|||+||.++..++..
T Consensus 270 -~lg--~~k~~LVGhSmGG~iAl~~A~~ 294 (481)
T PLN03087 270 -RYK--VKSFHIVAHSLGCILALALAVK 294 (481)
T ss_pred -HcC--CCCEEEEEECHHHHHHHHHHHh
Confidence 223 4689999999999999998863
No 97
>KOG4178|consensus
Probab=98.30 E-value=8.8e-06 Score=59.26 Aligned_cols=90 Identities=17% Similarity=0.246 Sum_probs=57.2
Q ss_pred CceEEEEEeCCCcccCCCCcch-hHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhC
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYD-GFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFG 97 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~-~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~ 97 (130)
.-|+|+++|| |-..+ ..++ .....+..|+.|+++|.| |++.++. |.......+..+..-+..+.++..
T Consensus 43 ~gP~illlHG--fPe~w-yswr~q~~~la~~~~rviA~Dlr----GyG~Sd~-P~~~~~Yt~~~l~~di~~lld~Lg--- 111 (322)
T KOG4178|consen 43 DGPIVLLLHG--FPESW-YSWRHQIPGLASRGYRVIAPDLR----GYGFSDA-PPHISEYTIDELVGDIVALLDHLG--- 111 (322)
T ss_pred CCCEEEEEcc--CCccc-hhhhhhhhhhhhcceEEEecCCC----CCCCCCC-CCCcceeeHHHHHHHHHHHHHHhc---
Confidence 4699999999 21111 1222 222445568999999999 5555444 444444455544433333333332
Q ss_pred CCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 98 GDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 98 ~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
-+|+.+.||+.|+.++..+++.
T Consensus 112 --~~k~~lvgHDwGaivaw~la~~ 133 (322)
T KOG4178|consen 112 --LKKAFLVGHDWGAIVAWRLALF 133 (322)
T ss_pred --cceeEEEeccchhHHHHHHHHh
Confidence 4899999999999999999873
No 98
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.29 E-value=9.3e-07 Score=62.08 Aligned_cols=35 Identities=23% Similarity=0.510 Sum_probs=26.7
Q ss_pred HHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 84 AALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 84 ~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
+.+.++.+ ++.+++++.+|+|+|+||..|+.+++.
T Consensus 101 el~p~i~~---~~~~~~~~~~i~G~S~GG~~Al~~~l~ 135 (251)
T PF00756_consen 101 ELIPYIEA---NYRTDPDRRAIAGHSMGGYGALYLALR 135 (251)
T ss_dssp HHHHHHHH---HSSEEECCEEEEEETHHHHHHHHHHHH
T ss_pred cchhHHHH---hcccccceeEEeccCCCcHHHHHHHHh
Confidence 34555554 456677779999999999999999873
No 99
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.28 E-value=3.6e-06 Score=63.34 Aligned_cols=99 Identities=13% Similarity=0.033 Sum_probs=55.2
Q ss_pred CCCCceEEEEEeCCCcccCCCCcchhHH--HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhh
Q psy13951 16 TYRRHSVLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNI 93 (130)
Q Consensus 16 ~~~~~Pvvv~iHGGg~~~g~~~~~~~~~--~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~ 93 (130)
..++.|+||.+-| ..+..+.+.... .+...|+.++++|..-. |... ...-..... .-..++++|+.+..
T Consensus 186 ~~~p~P~VIv~gG---lDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~--G~s~-~~~l~~D~~---~l~~aVLd~L~~~p 256 (411)
T PF06500_consen 186 GEKPYPTVIVCGG---LDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQ--GESP-KWPLTQDSS---RLHQAVLDYLASRP 256 (411)
T ss_dssp SSS-EEEEEEE-----TTS-GGGGHHHHHCCCHHCT-EEEEE--TTS--GGGT-TT-S-S-CC---HHHHHHHHHHHHST
T ss_pred CCCCCCEEEEeCC---cchhHHHHHHHHHHHHHhCCCEEEEEccCCC--cccc-cCCCCcCHH---HHHHHHHHHHhcCC
Confidence 5578899988777 233333333222 44568999999998832 1110 010011111 11236788887654
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHHh--CCCCCC
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLML--SPLLSP 126 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~~--~~~~~g 126 (130)
.+|.+||+++|.|+||+.+..+|. .+++++
T Consensus 257 ---~VD~~RV~~~G~SfGGy~AvRlA~le~~Rlka 288 (411)
T PF06500_consen 257 ---WVDHTRVGAWGFSFGGYYAVRLAALEDPRLKA 288 (411)
T ss_dssp ---TEEEEEEEEEEETHHHHHHHHHHHHTTTT-SE
T ss_pred ---ccChhheEEEEeccchHHHHHHHHhcccceee
Confidence 379999999999999999998874 355554
No 100
>PRK11071 esterase YqiA; Provisional
Probab=98.26 E-value=9.5e-06 Score=55.25 Aligned_cols=75 Identities=16% Similarity=0.159 Sum_probs=46.1
Q ss_pred eEEEEEeCCCcccCCCCcchh--H-HHhhc--CCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhh
Q psy13951 21 SVLVIIHGESYSFGSGNIYDG--F-VLASY--ANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEH 95 (130)
Q Consensus 21 Pvvv~iHGGg~~~g~~~~~~~--~-~~~~~--~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~ 95 (130)
|.||++||- .++...+.. . ..+.+ .++.++.++.+-- -++..+.+..+.+ .
T Consensus 2 p~illlHGf---~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~------------------~~~~~~~l~~l~~---~ 57 (190)
T PRK11071 2 STLLYLHGF---NSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPY------------------PADAAELLESLVL---E 57 (190)
T ss_pred CeEEEECCC---CCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCC------------------HHHHHHHHHHHHH---H
Confidence 679999992 223333321 1 12222 4788888887721 1244444443433 3
Q ss_pred hCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 96 FGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 96 ~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
++ .+++.++|+|+||.+++.++..
T Consensus 58 ~~--~~~~~lvG~S~Gg~~a~~~a~~ 81 (190)
T PRK11071 58 HG--GDPLGLVGSSLGGYYATWLSQC 81 (190)
T ss_pred cC--CCCeEEEEECHHHHHHHHHHHH
Confidence 33 4689999999999999999864
No 101
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.24 E-value=1.5e-05 Score=58.65 Aligned_cols=72 Identities=13% Similarity=0.082 Sum_probs=41.9
Q ss_pred HhhcCCeEEEeeccccccccCCCCCCCCC-----CCCCccHHHHHHHHHHHHHhhh----------------hhCCCCCC
Q psy13951 44 LASYANMVVVTFNFRLGILGFLRPGVGSS-----TVTNFGIMDQVAALQWIKDNIE----------------HFGGDPTS 102 (130)
Q Consensus 44 ~~~~~g~~vv~~~yrl~~~~~~~~~~~~~-----~~~~~~~~D~~~a~~~l~~~~~----------------~~~~d~~r 102 (130)
...+.|+.|+.+|.| |.+.+..... ..+..-++|+.+.++.+.+... .+. +...
T Consensus 69 ~l~~~G~~V~~~D~r----GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p 143 (332)
T TIGR01607 69 NFNKNGYSVYGLDLQ----GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKE-NRLP 143 (332)
T ss_pred HHHHCCCcEEEeccc----ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhcccccccccccccccccccc-CCCc
Confidence 555679999999999 3332221111 1223334455555555443110 111 1246
Q ss_pred eEEEEcChhHHHHHHHHh
Q psy13951 103 VTLMGHGTGAASINFLML 120 (130)
Q Consensus 103 i~l~G~SaGg~~a~~~~~ 120 (130)
++|+|||+||.++..++.
T Consensus 144 ~~l~GhSmGg~i~~~~~~ 161 (332)
T TIGR01607 144 MYIIGLSMGGNIALRLLE 161 (332)
T ss_pred eeEeeccCccHHHHHHHH
Confidence 999999999999998764
No 102
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.23 E-value=1.8e-05 Score=59.56 Aligned_cols=89 Identities=18% Similarity=0.257 Sum_probs=53.3
Q ss_pred ceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCC-CCCccHHHHHHHHHHHHHhhhhhC
Q psy13951 20 HSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSST-VTNFGIMDQVAALQWIKDNIEHFG 97 (130)
Q Consensus 20 ~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~-~~~~~~~D~~~a~~~l~~~~~~~~ 97 (130)
.|.||++||.+. +...|.... ..+ .++.|+++|++ |++.+...... .....+.+..+.+.-+.+ ..+
T Consensus 127 ~~~ivllHG~~~---~~~~w~~~~~~L~-~~~~Via~Dlp----G~G~S~~p~~~~~~~ys~~~~a~~l~~~i~---~l~ 195 (383)
T PLN03084 127 NPPVLLIHGFPS---QAYSYRKVLPVLS-KNYHAIAFDWL----GFGFSDKPQPGYGFNYTLDEYVSSLESLID---ELK 195 (383)
T ss_pred CCeEEEECCCCC---CHHHHHHHHHHHh-cCCEEEEECCC----CCCCCCCCcccccccCCHHHHHHHHHHHHH---HhC
Confidence 478999999432 233444444 333 47999999999 34333321111 123345555444433333 223
Q ss_pred CCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 98 GDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 98 ~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.+++.|+|+|.||.++..++..
T Consensus 196 --~~~~~LvG~s~GG~ia~~~a~~ 217 (383)
T PLN03084 196 --SDKVSLVVQGYFSPPVVKYASA 217 (383)
T ss_pred --CCCceEEEECHHHHHHHHHHHh
Confidence 3689999999999998888764
No 103
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.23 E-value=1e-05 Score=56.60 Aligned_cols=93 Identities=19% Similarity=0.219 Sum_probs=50.6
Q ss_pred eEEEEEeCCCcccCCCCcchhHH-Hh--------hcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHH
Q psy13951 21 SVLVIIHGESYSFGSGNIYDGFV-LA--------SYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKD 91 (130)
Q Consensus 21 Pvvv~iHGGg~~~g~~~~~~~~~-~~--------~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~ 91 (130)
..|||||| ..|+..+.+.+. .. ....+.++++||.-....+.. .....+.+-+..+++.+.+
T Consensus 5 ~pVlFIhG---~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g------~~l~~q~~~~~~~i~~i~~ 75 (225)
T PF07819_consen 5 IPVLFIHG---NAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHG------RTLQRQAEFLAEAIKYILE 75 (225)
T ss_pred CEEEEECc---CCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccccc------ccHHHHHHHHHHHHHHHHH
Confidence 46899999 333333332222 11 122466788887742111110 0111122233345555554
Q ss_pred hhhhhCCCCCCeEEEEcChhHHHHHHHHhCC
Q psy13951 92 NIEHFGGDPTSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 92 ~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
....-...+++|+|+|||+||-++..++..+
T Consensus 76 ~~~~~~~~~~~vilVgHSmGGlvar~~l~~~ 106 (225)
T PF07819_consen 76 LYKSNRPPPRSVILVGHSMGGLVARSALSLP 106 (225)
T ss_pred hhhhccCCCCceEEEEEchhhHHHHHHHhcc
Confidence 4422245689999999999999888877644
No 104
>KOG4409|consensus
Probab=98.21 E-value=6e-06 Score=60.63 Aligned_cols=90 Identities=26% Similarity=0.323 Sum_probs=48.1
Q ss_pred CCceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhh
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHF 96 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~ 96 (130)
+..+-+|+||| |..|..-....+. ++. ...|.++|-. |++.+..+ ....+.. .+..|..+.++++
T Consensus 88 ~~~~plVliHG--yGAg~g~f~~Nf~~La~--~~~vyaiDll----G~G~SSRP-~F~~d~~-----~~e~~fvesiE~W 153 (365)
T KOG4409|consen 88 ANKTPLVLIHG--YGAGLGLFFRNFDDLAK--IRNVYAIDLL----GFGRSSRP-KFSIDPT-----TAEKEFVESIEQW 153 (365)
T ss_pred cCCCcEEEEec--cchhHHHHHHhhhhhhh--cCceEEeccc----CCCCCCCC-CCCCCcc-----cchHHHHHHHHHH
Confidence 44567899999 2222222222222 333 5557777755 44444432 2111111 1111333333333
Q ss_pred C--CCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 97 G--GDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 97 ~--~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
. ...++++|+|||.||++++..|+.
T Consensus 154 R~~~~L~KmilvGHSfGGYLaa~YAlK 180 (365)
T KOG4409|consen 154 RKKMGLEKMILVGHSFGGYLAAKYALK 180 (365)
T ss_pred HHHcCCcceeEeeccchHHHHHHHHHh
Confidence 1 124699999999999999999874
No 105
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.20 E-value=2e-05 Score=58.31 Aligned_cols=70 Identities=20% Similarity=0.220 Sum_probs=41.5
Q ss_pred cCCeEEEeeccccccccCCC-CCCCCC-C-----CCCccHHHHHHHHHHHHHhhhhhCCCCCC-eEEEEcChhHHHHHHH
Q psy13951 47 YANMVVVTFNFRLGILGFLR-PGVGSS-T-----VTNFGIMDQVAALQWIKDNIEHFGGDPTS-VTLMGHGTGAASINFL 118 (130)
Q Consensus 47 ~~g~~vv~~~yrl~~~~~~~-~~~~~~-~-----~~~~~~~D~~~a~~~l~~~~~~~~~d~~r-i~l~G~SaGg~~a~~~ 118 (130)
..++.|+++|+|-...|... +...+. . ..+..++|..+.+.-+.+ .+++ ++ +.++|||+||.+++.+
T Consensus 70 ~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~--~~~~~l~G~S~Gg~ia~~~ 144 (351)
T TIGR01392 70 TDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLD---HLGI--EQIAAVVGGSMGGMQALEW 144 (351)
T ss_pred CCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHH---HcCC--CCceEEEEECHHHHHHHHH
Confidence 46899999999931111111 000010 0 113456666655544443 3343 56 9999999999999988
Q ss_pred HhC
Q psy13951 119 MLS 121 (130)
Q Consensus 119 ~~~ 121 (130)
+..
T Consensus 145 a~~ 147 (351)
T TIGR01392 145 AID 147 (351)
T ss_pred HHH
Confidence 763
No 106
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.19 E-value=3.6e-05 Score=55.24 Aligned_cols=92 Identities=17% Similarity=0.219 Sum_probs=63.1
Q ss_pred CceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhC
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFG 97 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~ 97 (130)
+..+||=+|| .-|+-..+.... ...+.|+.++.+||. ||..+...++..+ .-..-..|+....++++
T Consensus 34 ~~gTVv~~hG---sPGSH~DFkYi~~~l~~~~iR~I~iN~P----Gf~~t~~~~~~~~-----~n~er~~~~~~ll~~l~ 101 (297)
T PF06342_consen 34 PLGTVVAFHG---SPGSHNDFKYIRPPLDEAGIRFIGINYP----GFGFTPGYPDQQY-----TNEERQNFVNALLDELG 101 (297)
T ss_pred CceeEEEecC---CCCCccchhhhhhHHHHcCeEEEEeCCC----CCCCCCCCccccc-----ChHHHHHHHHHHHHHcC
Confidence 4568999999 445555554444 667789999999999 4443333222222 22233455666667777
Q ss_pred CCCCCeEEEEcChhHHHHHHHHhCCC
Q psy13951 98 GDPTSVTLMGHGTGAASINFLMLSPL 123 (130)
Q Consensus 98 ~d~~ri~l~G~SaGg~~a~~~~~~~~ 123 (130)
++ +++..+|||.|+-.|+.++....
T Consensus 102 i~-~~~i~~gHSrGcenal~la~~~~ 126 (297)
T PF06342_consen 102 IK-GKLIFLGHSRGCENALQLAVTHP 126 (297)
T ss_pred CC-CceEEEEeccchHHHHHHHhcCc
Confidence 77 89999999999999999987543
No 107
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.14 E-value=2.3e-05 Score=68.23 Aligned_cols=91 Identities=21% Similarity=0.303 Sum_probs=53.2
Q ss_pred CceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCC-----CCCCccHHHHHHHHHHHHHhh
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSS-----TVTNFGIMDQVAALQWIKDNI 93 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~-----~~~~~~~~D~~~a~~~l~~~~ 93 (130)
..|.||++||.+ ++...|....-.-...+.|+.+|+| |++.+..... ......+++..+.+.-+.+
T Consensus 1370 ~~~~vVllHG~~---~s~~~w~~~~~~L~~~~rVi~~Dl~----G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~-- 1440 (1655)
T PLN02980 1370 EGSVVLFLHGFL---GTGEDWIPIMKAISGSARCISIDLP----GHGGSKIQNHAKETQTEPTLSVELVADLLYKLIE-- 1440 (1655)
T ss_pred CCCeEEEECCCC---CCHHHHHHHHHHHhCCCEEEEEcCC----CCCCCCCccccccccccccCCHHHHHHHHHHHHH--
Confidence 347899999943 2333344433212246899999998 3333322110 1122345555444433322
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.+ +.+++.|+|||+||.+++.++..
T Consensus 1441 -~l--~~~~v~LvGhSmGG~iAl~~A~~ 1465 (1655)
T PLN02980 1441 -HI--TPGKVTLVGYSMGARIALYMALR 1465 (1655)
T ss_pred -Hh--CCCCEEEEEECHHHHHHHHHHHh
Confidence 22 34789999999999999998863
No 108
>KOG1454|consensus
Probab=98.11 E-value=3.6e-05 Score=56.70 Aligned_cols=90 Identities=16% Similarity=0.278 Sum_probs=54.7
Q ss_pred CCceEEEEEeCCCcccCCCCcchhHH--HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhh
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEH 95 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~~~~~--~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~ 95 (130)
+..|-||++|| |.. +...++... +....|+.|.++|.- + +|+ +.. .+......+.+....++-+- .+
T Consensus 56 ~~~~pvlllHG--F~~-~~~~w~~~~~~L~~~~~~~v~aiDl~-G-~g~--~s~-~~~~~~y~~~~~v~~i~~~~---~~ 124 (326)
T KOG1454|consen 56 KDKPPVLLLHG--FGA-SSFSWRRVVPLLSKAKGLRVLAIDLP-G-HGY--SSP-LPRGPLYTLRELVELIRRFV---KE 124 (326)
T ss_pred CCCCcEEEecc--ccC-CcccHhhhccccccccceEEEEEecC-C-CCc--CCC-CCCCCceehhHHHHHHHHHH---Hh
Confidence 45688999999 433 444555555 555556888888866 2 222 111 11222245555555444332 22
Q ss_pred hCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 96 FGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 96 ~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+. .+++.++|||+||.++..+|.
T Consensus 125 ~~--~~~~~lvghS~Gg~va~~~Aa 147 (326)
T KOG1454|consen 125 VF--VEPVSLVGHSLGGIVALKAAA 147 (326)
T ss_pred hc--CcceEEEEeCcHHHHHHHHHH
Confidence 22 245999999999999999886
No 109
>KOG2382|consensus
Probab=98.10 E-value=1.4e-05 Score=58.13 Aligned_cols=92 Identities=17% Similarity=0.145 Sum_probs=57.0
Q ss_pred CCCCceEEEEEeCCCcccCCCCcchhHH--HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhh
Q psy13951 16 TYRRHSVLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNI 93 (130)
Q Consensus 16 ~~~~~Pvvv~iHGGg~~~g~~~~~~~~~--~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~ 93 (130)
...+.|-++.+|| ..|+...+..+. ++.+.+..+.++|-|.- |..+.- ........-+|+..-++++....
T Consensus 48 ~~~~~Pp~i~lHG---l~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnH--G~Sp~~--~~h~~~~ma~dv~~Fi~~v~~~~ 120 (315)
T KOG2382|consen 48 NLERAPPAIILHG---LLGSKENWRSVAKNLSRKLGRDVYAVDVRNH--GSSPKI--TVHNYEAMAEDVKLFIDGVGGST 120 (315)
T ss_pred ccCCCCceEEecc---cccCCCCHHHHHHHhcccccCceEEEecccC--CCCccc--cccCHHHHHHHHHHHHHHccccc
Confidence 3446799999999 788888887777 77888888999998852 111110 11122223334444444443221
Q ss_pred hhhCCCCCCeEEEEcChhH-HHHHHHH
Q psy13951 94 EHFGGDPTSVTLMGHGTGA-ASINFLM 119 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg-~~a~~~~ 119 (130)
.-.++.+.|||+|| .++++.+
T Consensus 121 -----~~~~~~l~GHsmGG~~~~m~~t 142 (315)
T KOG2382|consen 121 -----RLDPVVLLGHSMGGVKVAMAET 142 (315)
T ss_pred -----ccCCceecccCcchHHHHHHHH
Confidence 24679999999999 4444333
No 110
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.05 E-value=3.5e-05 Score=56.62 Aligned_cols=96 Identities=14% Similarity=0.108 Sum_probs=63.7
Q ss_pred CceEEEEEeCCCcccCCCC-----cchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhh
Q psy13951 19 RHSVLVIIHGESYSFGSGN-----IYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNI 93 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~-----~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~ 93 (130)
+...|++.=|-|....... ..+...++...+..|+..|||-- ..+.+.+ . ...-..|..+.+++++++.
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGV----g~S~G~~-s-~~dLv~~~~a~v~yL~d~~ 209 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGV----GSSTGPP-S-RKDLVKDYQACVRYLRDEE 209 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCcc----ccCCCCC-C-HHHHHHHHHHHHHHHHhcc
Confidence 3457888888555544421 12233388889999999999932 2222212 1 2444567777888887643
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHHhCC
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
-++.+++|++.|||.||.+++.++...
T Consensus 210 --~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 210 --QGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred --cCCChheEEEeeccccHHHHHHHHHhc
Confidence 356789999999999999988765543
No 111
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.01 E-value=7e-05 Score=55.20 Aligned_cols=61 Identities=18% Similarity=0.182 Sum_probs=36.3
Q ss_pred CCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 48 ANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 48 ~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.++.|+++|.| |+..+. ..+..+.|..+.+.-+ +..++++ +.+.|+|||+||.+++.++..
T Consensus 98 ~~~~Vi~~Dl~----G~g~s~-----~~~~~~~~~a~dl~~l---l~~l~l~-~~~~lvG~SmGG~vA~~~A~~ 158 (343)
T PRK08775 98 ARFRLLAFDFI----GADGSL-----DVPIDTADQADAIALL---LDALGIA-RLHAFVGYSYGALVGLQFASR 158 (343)
T ss_pred cccEEEEEeCC----CCCCCC-----CCCCCHHHHHHHHHHH---HHHcCCC-cceEEEEECHHHHHHHHHHHH
Confidence 47999999999 222221 1122344443333222 2333332 235799999999999998874
No 112
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.01 E-value=8.4e-05 Score=53.26 Aligned_cols=95 Identities=21% Similarity=0.347 Sum_probs=60.4
Q ss_pred ceEEEEEeCCCcccCCCCcchhHH--Hhhc--CCeEEEeeccccccccCCCCCCC---CCCCCCccHHHHH-HHHHHHHH
Q psy13951 20 HSVLVIIHGESYSFGSGNIYDGFV--LASY--ANMVVVTFNFRLGILGFLRPGVG---SSTVTNFGIMDQV-AALQWIKD 91 (130)
Q Consensus 20 ~Pvvv~iHGGg~~~g~~~~~~~~~--~~~~--~g~~vv~~~yrl~~~~~~~~~~~---~~~~~~~~~~D~~-~a~~~l~~ 91 (130)
++++++|.|-. |-...|..+. +..+ ..+.|..+.+. |+...... ........++|+. ..++++++
T Consensus 2 ~~li~~IPGNP---Glv~fY~~Fl~~L~~~l~~~~~i~~ish~----Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~ 74 (266)
T PF10230_consen 2 RPLIVFIPGNP---GLVEFYEEFLSALYEKLNPQFEILGISHA----GHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKE 74 (266)
T ss_pred cEEEEEECCCC---ChHHHHHHHHHHHHHhCCCCCeeEEecCC----CCcCCcccccccCCCCccCHHHHHHHHHHHHHH
Confidence 47999999933 3334454444 3333 47888888776 33222221 1134556677776 45666766
Q ss_pred hhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 92 NIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 92 ~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
...+......+++++|||.|++|++.++-.
T Consensus 75 ~~~~~~~~~~~liLiGHSIGayi~levl~r 104 (266)
T PF10230_consen 75 LIPQKNKPNVKLILIGHSIGAYIALEVLKR 104 (266)
T ss_pred HhhhhcCCCCcEEEEeCcHHHHHHHHHHHh
Confidence 665443245789999999999999998864
No 113
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.00 E-value=4.1e-05 Score=52.18 Aligned_cols=21 Identities=29% Similarity=0.509 Sum_probs=18.5
Q ss_pred CCCeEEEEcChhHHHHHHHHh
Q psy13951 100 PTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+++++|+|+|+||+.|..++.
T Consensus 58 ~~~~~liGSSlGG~~A~~La~ 78 (187)
T PF05728_consen 58 PENVVLIGSSLGGFYATYLAE 78 (187)
T ss_pred CCCeEEEEEChHHHHHHHHHH
Confidence 455999999999999999875
No 114
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.97 E-value=7.6e-05 Score=58.32 Aligned_cols=86 Identities=13% Similarity=0.081 Sum_probs=50.5
Q ss_pred eEEEEEeC---CCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCC-CccHHHHHHHHHHHHHhhhhh
Q psy13951 21 SVLVIIHG---ESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVT-NFGIMDQVAALQWIKDNIEHF 96 (130)
Q Consensus 21 Pvvv~iHG---Gg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~-~~~~~D~~~a~~~l~~~~~~~ 96 (130)
+-|+++|+ .+|+..-.+.......+.++|+.|+.+++|- +. .+. ..... ....+++.++++.+.+..
T Consensus 189 ~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrg-pg---~s~--~~~~~ddY~~~~i~~al~~v~~~~--- 259 (532)
T TIGR01838 189 TPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRN-PD---ASQ--ADKTFDDYIRDGVIAALEVVEAIT--- 259 (532)
T ss_pred CcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCC-CC---ccc--ccCChhhhHHHHHHHHHHHHHHhc---
Confidence 45788998 2233222222223335566799999999983 11 111 11111 223345667777776543
Q ss_pred CCCCCCeEEEEcChhHHHHHH
Q psy13951 97 GGDPTSVTLMGHGTGAASINF 117 (130)
Q Consensus 97 ~~d~~ri~l~G~SaGg~~a~~ 117 (130)
..+++.++|||+||.+++.
T Consensus 260 --g~~kv~lvG~cmGGtl~a~ 278 (532)
T TIGR01838 260 --GEKQVNCVGYCIGGTLLST 278 (532)
T ss_pred --CCCCeEEEEECcCcHHHHH
Confidence 3578999999999998643
No 115
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.91 E-value=2.2e-05 Score=55.23 Aligned_cols=21 Identities=10% Similarity=0.192 Sum_probs=18.6
Q ss_pred CCCeEEEEcChhHHHHHHHHh
Q psy13951 100 PTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~ 120 (130)
..+|.|++||+|+.+.+..+.
T Consensus 92 ~~~I~ilaHSMG~rv~~~aL~ 112 (233)
T PF05990_consen 92 IKRIHILAHSMGNRVLLEALR 112 (233)
T ss_pred CceEEEEEeCchHHHHHHHHH
Confidence 589999999999999988764
No 116
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=97.90 E-value=0.00019 Score=53.74 Aligned_cols=70 Identities=19% Similarity=0.139 Sum_probs=39.9
Q ss_pred cCCeEEEeeccccccccC-CCCCCCCC--CC-----CCccHHHHHHHHHHHHHhhhhhCCCCCC-eEEEEcChhHHHHHH
Q psy13951 47 YANMVVVTFNFRLGILGF-LRPGVGSS--TV-----TNFGIMDQVAALQWIKDNIEHFGGDPTS-VTLMGHGTGAASINF 117 (130)
Q Consensus 47 ~~g~~vv~~~yrl~~~~~-~~~~~~~~--~~-----~~~~~~D~~~a~~~l~~~~~~~~~d~~r-i~l~G~SaGg~~a~~ 117 (130)
..++.|+++|.+-...+. .++...+. .+ .+..++|..+.+.-+.+ .+++ ++ ..++|+|+||.+++.
T Consensus 89 ~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~l~~--~~~~~lvG~S~Gg~ia~~ 163 (379)
T PRK00175 89 TDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLD---ALGI--TRLAAVVGGSMGGMQALE 163 (379)
T ss_pred ccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHH---HhCC--CCceEEEEECHHHHHHHH
Confidence 458999999988421111 11110011 11 13456666544443333 3443 56 589999999999998
Q ss_pred HHhC
Q psy13951 118 LMLS 121 (130)
Q Consensus 118 ~~~~ 121 (130)
++..
T Consensus 164 ~a~~ 167 (379)
T PRK00175 164 WAID 167 (379)
T ss_pred HHHh
Confidence 8763
No 117
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=97.88 E-value=6.3e-05 Score=61.17 Aligned_cols=74 Identities=14% Similarity=0.060 Sum_probs=52.8
Q ss_pred HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhC-----------CCCCCeEEEEcChhH
Q psy13951 44 LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFG-----------GDPTSVTLMGHGTGA 112 (130)
Q Consensus 44 ~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~-----------~d~~ri~l~G~SaGg 112 (130)
....+||+|+.++.| |.+.+++......+...+|..++++|+..+...|- =...||+++|.|+||
T Consensus 274 ~~~~rGYaVV~~D~R----Gtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 274 YFLPRGFAVVYVSGI----GTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred HHHhCCeEEEEEcCC----CCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 455679999999999 34444443333346678899999999986432110 014799999999999
Q ss_pred HHHHHHHhC
Q psy13951 113 ASINFLMLS 121 (130)
Q Consensus 113 ~~a~~~~~~ 121 (130)
.++..+|..
T Consensus 350 ~~~~~aAa~ 358 (767)
T PRK05371 350 TLPNAVATT 358 (767)
T ss_pred HHHHHHHhh
Confidence 999988763
No 118
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=97.80 E-value=0.00014 Score=50.19 Aligned_cols=82 Identities=15% Similarity=0.077 Sum_probs=49.7
Q ss_pred EEEEEeCCCcccCCCCcchhHHHhhcC-CeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHH-HHHHHHhhhhhCCC
Q psy13951 22 VLVIIHGESYSFGSGNIYDGFVLASYA-NMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAA-LQWIKDNIEHFGGD 99 (130)
Q Consensus 22 vvv~iHGGg~~~g~~~~~~~~~~~~~~-g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a-~~~l~~~~~~~~~d 99 (130)
.|+.+|+|+ |+...|..+.-.-.. .+.|..++++... ........++++... ++.+++. .
T Consensus 2 ~lf~~p~~g---G~~~~y~~la~~l~~~~~~v~~i~~~~~~---------~~~~~~~si~~la~~y~~~I~~~------~ 63 (229)
T PF00975_consen 2 PLFCFPPAG---GSASSYRPLARALPDDVIGVYGIEYPGRG---------DDEPPPDSIEELASRYAEAIRAR------Q 63 (229)
T ss_dssp EEEEESSTT---CSGGGGHHHHHHHTTTEEEEEEECSTTSC---------TTSHEESSHHHHHHHHHHHHHHH------T
T ss_pred eEEEEcCCc---cCHHHHHHHHHhCCCCeEEEEEEecCCCC---------CCCCCCCCHHHHHHHHHHHhhhh------C
Confidence 578899965 455566666622223 4788888877320 122333445554422 2333322 2
Q ss_pred CC-CeEEEEcChhHHHHHHHHhC
Q psy13951 100 PT-SVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 100 ~~-ri~l~G~SaGg~~a~~~~~~ 121 (130)
++ .+.|+|+|+||.+|..+|..
T Consensus 64 ~~gp~~L~G~S~Gg~lA~E~A~~ 86 (229)
T PF00975_consen 64 PEGPYVLAGWSFGGILAFEMARQ 86 (229)
T ss_dssp SSSSEEEEEETHHHHHHHHHHHH
T ss_pred CCCCeeehccCccHHHHHHHHHH
Confidence 33 89999999999999999863
No 119
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.79 E-value=8.2e-05 Score=55.03 Aligned_cols=96 Identities=17% Similarity=0.162 Sum_probs=54.6
Q ss_pred CceEEEEEeCCCcccCCCC-cchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhC
Q psy13951 19 RHSVLVIIHGESYSFGSGN-IYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFG 97 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~-~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~ 97 (130)
..-++||+|| |...-.+ -++..+++...|+-.+.+-+...+.+..-.-.-.....++...+....+++|.+...
T Consensus 115 ~k~vlvFvHG--fNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~--- 189 (377)
T COG4782 115 AKTVLVFVHG--FNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKP--- 189 (377)
T ss_pred CCeEEEEEcc--cCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCC---
Confidence 4569999999 2222112 233444666666555555444432222111000222333444566666777665432
Q ss_pred CCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 98 GDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 98 ~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.++|.|+.||||..+++..+.+
T Consensus 190 --~~~I~ilAHSMGtwl~~e~LrQ 211 (377)
T COG4782 190 --VKRIYLLAHSMGTWLLMEALRQ 211 (377)
T ss_pred --CceEEEEEecchHHHHHHHHHH
Confidence 4799999999999999987754
No 120
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.78 E-value=2.6e-05 Score=54.59 Aligned_cols=81 Identities=23% Similarity=0.290 Sum_probs=56.0
Q ss_pred cchhHH-HhhcCCeEEEeeccccccccCCCCCCC-CCCCCCccHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHH
Q psy13951 38 IYDGFV-LASYANMVVVTFNFRLGILGFLRPGVG-SSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASI 115 (130)
Q Consensus 38 ~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~-~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a 115 (130)
.|..++ .+++.|+.|+..+||-.......+... +-.-.++...|.-++++++++.... -..+.+|||.||++.
T Consensus 45 fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~-----~P~y~vgHS~GGqa~ 119 (281)
T COG4757 45 FYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPG-----HPLYFVGHSFGGQAL 119 (281)
T ss_pred HhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCC-----CceEEeeccccceee
Confidence 355555 788899999999999432111111111 2223467788888999999876533 457899999999998
Q ss_pred HHHHhCCC
Q psy13951 116 NFLMLSPL 123 (130)
Q Consensus 116 ~~~~~~~~ 123 (130)
..+...++
T Consensus 120 gL~~~~~k 127 (281)
T COG4757 120 GLLGQHPK 127 (281)
T ss_pred cccccCcc
Confidence 88877663
No 121
>COG3150 Predicted esterase [General function prediction only]
Probab=97.76 E-value=0.00015 Score=48.33 Aligned_cols=77 Identities=18% Similarity=0.337 Sum_probs=47.7
Q ss_pred EEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCCCCC
Q psy13951 23 LVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTS 102 (130)
Q Consensus 23 vv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~r 102 (130)
|+|+|| |.. +...+....+....+-.+..++|+. +..+. |...+++.+.+.+.+.+ | ++
T Consensus 2 ilYlHG--FnS-SP~shka~l~~q~~~~~~~~i~y~~-----------p~l~h-----~p~~a~~ele~~i~~~~-~-~~ 60 (191)
T COG3150 2 ILYLHG--FNS-SPGSHKAVLLLQFIDEDVRDIEYST-----------PHLPH-----DPQQALKELEKAVQELG-D-ES 60 (191)
T ss_pred eEEEec--CCC-CcccHHHHHHHHHHhccccceeeec-----------CCCCC-----CHHHHHHHHHHHHHHcC-C-CC
Confidence 899999 433 4444433333332333466677763 22111 55666666666665544 3 34
Q ss_pred eEEEEcChhHHHHHHHHh
Q psy13951 103 VTLMGHGTGAASINFLML 120 (130)
Q Consensus 103 i~l~G~SaGg~~a~~~~~ 120 (130)
+.|+|.|.||+.+..++.
T Consensus 61 p~ivGssLGGY~At~l~~ 78 (191)
T COG3150 61 PLIVGSSLGGYYATWLGF 78 (191)
T ss_pred ceEEeecchHHHHHHHHH
Confidence 999999999999999875
No 122
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=97.76 E-value=0.00016 Score=52.63 Aligned_cols=97 Identities=12% Similarity=0.197 Sum_probs=52.6
Q ss_pred CceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhC
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFG 97 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~ 97 (130)
+.-+||||-|=+-..........++ .....++.++.+..+-+-.||+.... ..-.+|+.++++|+++.-.. .
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL------~~D~~eI~~~v~ylr~~~~g-~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSL------DRDVEEIAQLVEYLRSEKGG-H 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--H------HHHHHHHHHHHHHHHHHS----
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchh------hhHHHHHHHHHHHHHHhhcc-c
Confidence 3458999988221111222223333 34557999999998854444443322 22366888999999876311 1
Q ss_pred CCCCCeEEEEcChhHHHHHHHHhCC
Q psy13951 98 GDPTSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 98 ~d~~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
-..++|+|+|||-|.+-++.++..+
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~ 129 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSP 129 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-
T ss_pred cCCccEEEEecCCCcHHHHHHHhcc
Confidence 1468999999999999999988744
No 123
>KOG2237|consensus
Probab=97.72 E-value=9.6e-05 Score=58.14 Aligned_cols=102 Identities=14% Similarity=0.043 Sum_probs=69.0
Q ss_pred CCCCCceEEEEEeCCCcccCCCCc-chhHHHhhcCCeEEEeeccccccccC-CCCCCCCCCCCCccHHHHHHHHHHHHHh
Q psy13951 15 RTYRRHSVLVIIHGESYSFGSGNI-YDGFVLASYANMVVVTFNFRLGILGF-LRPGVGSSTVTNFGIMDQVAALQWIKDN 92 (130)
Q Consensus 15 ~~~~~~Pvvv~iHGGg~~~g~~~~-~~~~~~~~~~g~~vv~~~yrl~~~~~-~~~~~~~~~~~~~~~~D~~~a~~~l~~~ 92 (130)
+...+.|.++|.|||.-..-.... ..+..+.. .|++.+..+-|-+.+.. -+-...........+.|-+++.++|.++
T Consensus 465 k~dg~~P~LLygYGay~isl~p~f~~srl~lld-~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~ 543 (712)
T KOG2237|consen 465 KLDGSKPLLLYGYGAYGISLDPSFRASRLSLLD-RGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVEN 543 (712)
T ss_pred hhcCCCceEEEEecccceeeccccccceeEEEe-cceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHc
Confidence 334577999999997544433332 12222445 79999999999542211 1111114445566789999999999876
Q ss_pred hhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 93 IEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 93 ~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.- ..++++++.|.|+||-++..+.-
T Consensus 544 gy---t~~~kL~i~G~SaGGlLvga~iN 568 (712)
T KOG2237|consen 544 GY---TQPSKLAIEGGSAGGLLVGACIN 568 (712)
T ss_pred CC---CCccceeEecccCccchhHHHhc
Confidence 43 36899999999999999887764
No 124
>PRK07868 acyl-CoA synthetase; Validated
Probab=97.66 E-value=0.00043 Score=57.89 Aligned_cols=85 Identities=16% Similarity=0.160 Sum_probs=48.0
Q ss_pred CceEEEEEeCCCcccCCCCcchh------HHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHH----HHHHH
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDG------FVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQV----AALQW 88 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~------~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~----~a~~~ 88 (130)
..|.||++||- ..+...++. .....+.|+.|+.+|+... .. +.......+.|.. ++++.
T Consensus 66 ~~~plllvhg~---~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G~~-------~~-~~~~~~~~l~~~i~~l~~~l~~ 134 (994)
T PRK07868 66 VGPPVLMVHPM---MMSADMWDVTRDDGAVGILHRAGLDPWVIDFGSP-------DK-VEGGMERNLADHVVALSEAIDT 134 (994)
T ss_pred CCCcEEEECCC---CCCccceecCCcccHHHHHHHCCCEEEEEcCCCC-------Ch-hHcCccCCHHHHHHHHHHHHHH
Confidence 34789999992 222222322 2345557999999996421 00 1111123444443 22222
Q ss_pred HHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 89 IKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 89 l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+++ .. .+++.++|+|+||.+++.++.
T Consensus 135 v~~----~~--~~~v~lvG~s~GG~~a~~~aa 160 (994)
T PRK07868 135 VKD----VT--GRDVHLVGYSQGGMFCYQAAA 160 (994)
T ss_pred HHH----hh--CCceEEEEEChhHHHHHHHHH
Confidence 222 22 257999999999999988765
No 125
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.63 E-value=0.00022 Score=49.53 Aligned_cols=37 Identities=14% Similarity=0.317 Sum_probs=26.9
Q ss_pred HHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 84 AALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 84 ~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
..++++.+..........+|.++|||+||-++-.++.
T Consensus 61 rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 61 RLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 3455666655554444578999999999999987765
No 126
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.63 E-value=0.00014 Score=57.37 Aligned_cols=102 Identities=14% Similarity=0.026 Sum_probs=65.7
Q ss_pred CCCCCceEEEEEeCCCcccCCCCcch-hHHHhhcCCeEEEeeccccccc-cCCCCCCCCCCCCCccHHHHHHHHHHHHHh
Q psy13951 15 RTYRRHSVLVIIHGESYSFGSGNIYD-GFVLASYANMVVVTFNFRLGIL-GFLRPGVGSSTVTNFGIMDQVAALQWIKDN 92 (130)
Q Consensus 15 ~~~~~~Pvvv~iHGGg~~~g~~~~~~-~~~~~~~~g~~vv~~~yrl~~~-~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~ 92 (130)
+...+.|+++|-.|..-......... .+.+.. +|++....--|-+.+ |..+.........-..+.|-+++.++|.+.
T Consensus 443 ~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlD-RGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~ 521 (682)
T COG1770 443 KLDGSAPLLLYGYGAYGISMDPSFSIARLSLLD-RGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKE 521 (682)
T ss_pred CCCCCCcEEEEEeccccccCCcCcccceeeeec-CceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHc
Confidence 45667899999999543333333221 222444 699888888785421 111111113333445678999999999875
Q ss_pred hhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 93 IEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 93 ~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.- .++++|+++|.||||.+...++.
T Consensus 522 g~---~~~~~i~a~GGSAGGmLmGav~N 546 (682)
T COG1770 522 GY---TSPDRIVAIGGSAGGMLMGAVAN 546 (682)
T ss_pred Cc---CCccceEEeccCchhHHHHHHHh
Confidence 32 47899999999999999988774
No 127
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.61 E-value=0.00051 Score=46.72 Aligned_cols=63 Identities=19% Similarity=0.276 Sum_probs=41.7
Q ss_pred eEEEeeccccccccCCCCCC-CCCCCCCccHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 50 MVVVTFNFRLGILGFLRPGV-GSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 50 ~~vv~~~yrl~~~~~~~~~~-~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
|.|+.+|.|- +..+.. ...........|....++.+.+.. ++ +++.++|||+||.+++.++..
T Consensus 1 f~vi~~d~rG----~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~--~~~~~vG~S~Gg~~~~~~a~~ 64 (230)
T PF00561_consen 1 FDVILFDLRG----FGYSSPHWDPDFPDYTTDDLAADLEALREAL---GI--KKINLVGHSMGGMLALEYAAQ 64 (230)
T ss_dssp EEEEEEECTT----STTSSSCCGSGSCTHCHHHHHHHHHHHHHHH---TT--SSEEEEEETHHHHHHHHHHHH
T ss_pred CEEEEEeCCC----CCCCCCCccCCcccccHHHHHHHHHHHHHHh---CC--CCeEEEEECCChHHHHHHHHH
Confidence 4578888873 222221 002233455778888888887654 33 459999999999999998863
No 128
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.56 E-value=0.00058 Score=52.67 Aligned_cols=21 Identities=10% Similarity=0.132 Sum_probs=18.3
Q ss_pred CCCeEEEEcChhHHHHHHHHh
Q psy13951 100 PTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.++++|+|+|+||+.+..++.
T Consensus 170 ~~~~~i~GeSygG~y~p~~a~ 190 (462)
T PTZ00472 170 ANDLFVVGESYGGHYAPATAY 190 (462)
T ss_pred CCCEEEEeecchhhhHHHHHH
Confidence 478999999999998877764
No 129
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.55 E-value=0.00073 Score=45.68 Aligned_cols=85 Identities=25% Similarity=0.293 Sum_probs=45.4
Q ss_pred ceEEEEEeCCCcccCCCCcchhHH-HhhcC-CeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhC
Q psy13951 20 HSVLVIIHGESYSFGSGNIYDGFV-LASYA-NMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFG 97 (130)
Q Consensus 20 ~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~-g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~ 97 (130)
.|.++++||.+........ ... +.... .+.++.+|.| +. ..+. .. ....... .+.+......++
T Consensus 21 ~~~i~~~hg~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~-g~---g~s~-~~----~~~~~~~---~~~~~~~~~~~~ 86 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRP--VFKVLPALAARYRVIAPDLR-GH---GRSD-PA----GYSLSAY---ADDLAALLDALG 86 (282)
T ss_pred CCeEEEeCCCCCchhhhHH--HHHHhhccccceEEEEeccc-CC---CCCC-cc----cccHHHH---HHHHHHHHHHhC
Confidence 4589999996533222221 112 22211 1889999998 31 1111 00 1111112 222333333444
Q ss_pred CCCCCeEEEEcChhHHHHHHHHh
Q psy13951 98 GDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 98 ~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.+ ++.+.|||+||.++..++.
T Consensus 87 ~~--~~~l~G~S~Gg~~~~~~~~ 107 (282)
T COG0596 87 LE--KVVLVGHSMGGAVALALAL 107 (282)
T ss_pred CC--ceEEEEecccHHHHHHHHH
Confidence 33 4999999999999998876
No 130
>KOG2112|consensus
Probab=97.52 E-value=0.0017 Score=44.69 Aligned_cols=44 Identities=18% Similarity=0.228 Sum_probs=36.5
Q ss_pred cHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 78 GIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 78 ~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.+....+.+.++.++....+++++||.+.|.|+||.++++.++.
T Consensus 70 ~~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~ 113 (206)
T KOG2112|consen 70 GLHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALT 113 (206)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhc
Confidence 34455566777777778889999999999999999999998874
No 131
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.50 E-value=0.00051 Score=53.76 Aligned_cols=99 Identities=12% Similarity=0.024 Sum_probs=65.6
Q ss_pred CCCCCceEEEEEeCCCcccCCC---CcchhH---HHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHH
Q psy13951 15 RTYRRHSVLVIIHGESYSFGSG---NIYDGF---VLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQW 88 (130)
Q Consensus 15 ~~~~~~Pvvv~iHGGg~~~g~~---~~~~~~---~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~ 88 (130)
+...+.||++..+=..+..... .++... ..+...||+||..|-| |.+.+++.-+.......+|..+.++|
T Consensus 40 a~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvR----G~~~SeG~~~~~~~~E~~Dg~D~I~W 115 (563)
T COG2936 40 AGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVR----GRGGSEGVFDPESSREAEDGYDTIEW 115 (563)
T ss_pred CCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEeccc----ccccCCcccceeccccccchhHHHHH
Confidence 3447889999999434433321 111111 2345689999999999 33444433111122467899999999
Q ss_pred HHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 89 IKDNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 89 l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
+.+..-. ..||+.+|-|.+|+...++|..
T Consensus 116 ia~QpWs----NG~Vgm~G~SY~g~tq~~~Aa~ 144 (563)
T COG2936 116 LAKQPWS----NGNVGMLGLSYLGFTQLAAAAL 144 (563)
T ss_pred HHhCCcc----CCeeeeecccHHHHHHHHHHhc
Confidence 9875432 4789999999999999998863
No 132
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.49 E-value=0.00022 Score=54.36 Aligned_cols=99 Identities=15% Similarity=0.074 Sum_probs=52.0
Q ss_pred ceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccC----CCCCCCCCCCCCccHHHHHHHHHHHHHhhh
Q psy13951 20 HSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGF----LRPGVGSSTVTNFGIMDQVAALQWIKDNIE 94 (130)
Q Consensus 20 ~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~----~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~ 94 (130)
.||+||+-|-+=............ +|.+.|..++.+++|.-.... .....-.-......+.|+..-++++++...
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~ 108 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYN 108 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhc
Confidence 699999966322211111111222 889999999999999631111 000000111223355666666666664321
Q ss_pred hhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 95 HFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 95 ~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
..+..+++++|-|.||.|++.+-.
T Consensus 109 --~~~~~pwI~~GgSY~G~Laaw~r~ 132 (434)
T PF05577_consen 109 --TAPNSPWIVFGGSYGGALAAWFRL 132 (434)
T ss_dssp --TGCC--EEEEEETHHHHHHHHHHH
T ss_pred --CCCCCCEEEECCcchhHHHHHHHh
Confidence 124468999999999999998854
No 133
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.47 E-value=0.00088 Score=49.60 Aligned_cols=96 Identities=11% Similarity=0.029 Sum_probs=55.1
Q ss_pred CCCceEEEEEeCCCcccCCCCcchhHH--HhhcCCeEEEeeccccc----cccCCCCCCC----CCCCCCccHHHHHHHH
Q psy13951 17 YRRHSVLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLG----ILGFLRPGVG----SSTVTNFGIMDQVAAL 86 (130)
Q Consensus 17 ~~~~Pvvv~iHGGg~~~g~~~~~~~~~--~~~~~g~~vv~~~yrl~----~~~~~~~~~~----~~~~~~~~~~D~~~a~ 86 (130)
.+++|++|++.|-|-..-.... ..+. ++.+ |+..+.++-..- |.....+... --......+.|+...+
T Consensus 89 ~~~rp~~IhLagTGDh~f~rR~-~l~a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll 166 (348)
T PF09752_consen 89 SPYRPVCIHLAGTGDHGFWRRR-RLMARPLLKE-GIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALL 166 (348)
T ss_pred cCCCceEEEecCCCccchhhhh-hhhhhHHHHc-CcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHH
Confidence 3457999999994432211111 1212 4444 887777763321 1000001000 0011223466777888
Q ss_pred HHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 87 QWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 87 ~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.|+.++. ..+++|.|-|+||+||.+.+.
T Consensus 167 ~Wl~~~G------~~~~g~~G~SmGG~~A~laa~ 194 (348)
T PF09752_consen 167 HWLEREG------YGPLGLTGISMGGHMAALAAS 194 (348)
T ss_pred HHHHhcC------CCceEEEEechhHhhHHhhhh
Confidence 9998762 469999999999999998875
No 134
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.40 E-value=0.0008 Score=46.97 Aligned_cols=86 Identities=16% Similarity=0.276 Sum_probs=39.4
Q ss_pred EEEEeCCCcccC-CCCcchhHH-HhhcCCeE---EEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhC
Q psy13951 23 LVIIHGESYSFG-SGNIYDGFV-LASYANMV---VVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFG 97 (130)
Q Consensus 23 vv~iHGGg~~~g-~~~~~~~~~-~~~~~g~~---vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~ 97 (130)
||++||-+ + ....+.... ...+.||. +.+++|--..... .........+.+.+.-+++.+....-+
T Consensus 4 VVlVHG~~---~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~------~~~~~~~~~~~~~~l~~fI~~Vl~~TG 74 (219)
T PF01674_consen 4 VVLVHGTG---GNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSP------SVQNAHMSCESAKQLRAFIDAVLAYTG 74 (219)
T ss_dssp EEEE--TT---TTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHT------HHHHHHB-HHHHHHHHHHHHHHHHHHT
T ss_pred EEEECCCC---cchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCC------cccccccchhhHHHHHHHHHHHHHhhC
Confidence 68999932 3 233455555 55667988 7999987421000 000000112222233333333332222
Q ss_pred CCCCCeEEEEcChhHHHHHHHHh
Q psy13951 98 GDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 98 ~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
. +|-|+|||+|+.++.....
T Consensus 75 --a-kVDIVgHS~G~~iaR~yi~ 94 (219)
T PF01674_consen 75 --A-KVDIVGHSMGGTIARYYIK 94 (219)
T ss_dssp -----EEEEEETCHHHHHHHHHH
T ss_pred --C-EEEEEEcCCcCHHHHHHHH
Confidence 3 9999999999999988764
No 135
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.39 E-value=0.0036 Score=44.75 Aligned_cols=28 Identities=18% Similarity=0.487 Sum_probs=24.3
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
..+.+|.+|..|+|||.||-.++..++.
T Consensus 130 ~~y~~~~~~~~i~GhSlGGLfvl~aLL~ 157 (264)
T COG2819 130 ARYRTNSERTAIIGHSLGGLFVLFALLT 157 (264)
T ss_pred cccccCcccceeeeecchhHHHHHHHhc
Confidence 3478899999999999999999988764
No 136
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=97.33 E-value=0.003 Score=47.72 Aligned_cols=40 Identities=18% Similarity=0.232 Sum_probs=28.6
Q ss_pred ccHHHHHHHHHHHHHhhhhhCCCCCCeE-EEEcChhHHHHHHHHhC
Q psy13951 77 FGIMDQVAALQWIKDNIEHFGGDPTSVT-LMGHGTGAASINFLMLS 121 (130)
Q Consensus 77 ~~~~D~~~a~~~l~~~~~~~~~d~~ri~-l~G~SaGg~~a~~~~~~ 121 (130)
..++|..+.+..+.+ .+++ +++. ++|+|+||..++.++..
T Consensus 141 ~t~~d~~~~~~~ll~---~lgi--~~~~~vvG~SmGG~ial~~a~~ 181 (389)
T PRK06765 141 VTILDFVRVQKELIK---SLGI--ARLHAVMGPSMGGMQAQEWAVH 181 (389)
T ss_pred CcHHHHHHHHHHHHH---HcCC--CCceEEEEECHHHHHHHHHHHH
Confidence 456776666555544 3444 5775 99999999999998863
No 137
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=97.31 E-value=0.0018 Score=43.18 Aligned_cols=92 Identities=12% Similarity=0.191 Sum_probs=50.9
Q ss_pred eEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccH-HHHHHHHHHHHHhhhhhCC
Q psy13951 21 SVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGI-MDQVAALQWIKDNIEHFGG 98 (130)
Q Consensus 21 Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~-~D~~~a~~~l~~~~~~~~~ 98 (130)
-+||.-||.|-...+... ...+ ..+..|+.|+.+++..-.-.. .+.....+...++ .+.+.++.-++...
T Consensus 15 ~tilLaHGAGasmdSt~m-~~~a~~la~~G~~vaRfefpYma~Rr--tg~rkPp~~~~t~~~~~~~~~aql~~~l----- 86 (213)
T COG3571 15 VTILLAHGAGASMDSTSM-TAVAAALARRGWLVARFEFPYMAARR--TGRRKPPPGSGTLNPEYIVAIAQLRAGL----- 86 (213)
T ss_pred EEEEEecCCCCCCCCHHH-HHHHHHHHhCceeEEEeecchhhhcc--ccCCCCcCccccCCHHHHHHHHHHHhcc-----
Confidence 478888996544333322 3333 445679999988875421000 0000111111222 23344444454433
Q ss_pred CCCCeEEEEcChhHHHHHHHHh
Q psy13951 99 DPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 99 d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+-..+++.|+|+||-++.+++-
T Consensus 87 ~~gpLi~GGkSmGGR~aSmvad 108 (213)
T COG3571 87 AEGPLIIGGKSMGGRVASMVAD 108 (213)
T ss_pred cCCceeeccccccchHHHHHHH
Confidence 4467999999999999999874
No 138
>KOG3975|consensus
Probab=97.26 E-value=0.0044 Score=44.07 Aligned_cols=104 Identities=19% Similarity=0.247 Sum_probs=58.9
Q ss_pred CCCCCCCCCCceEEEEEeCCCcccCCCCcchhHH--HhhcC-----CeEEEeeccccccccCCCCCCCCCCCCCccHHHH
Q psy13951 10 SPDSSRTYRRHSVLVIIHGESYSFGSGNIYDGFV--LASYA-----NMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQ 82 (130)
Q Consensus 10 ~p~~~~~~~~~Pvvv~iHGGg~~~g~~~~~~~~~--~~~~~-----g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~ 82 (130)
.|.........|++++|.|-.- ....|..+. +.... -+.+-..++-+.|..-..... -...--..++|+
T Consensus 19 ~~~v~~~~~~~~li~~IpGNPG---~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s-~~~~eifsL~~Q 94 (301)
T KOG3975|consen 19 KPWVTKSGEDKPLIVWIPGNPG---LLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHS-HTNEEIFSLQDQ 94 (301)
T ss_pred eeeeccCCCCceEEEEecCCCC---chhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccc-cccccccchhhH
Confidence 3444455567899999999432 222333333 22222 344555555554421111111 111123345565
Q ss_pred H-HHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 83 V-AALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 83 ~-~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
. --++++++...+ -.+|+++|||-|++|.+.++-.
T Consensus 95 V~HKlaFik~~~Pk----~~ki~iiGHSiGaYm~Lqil~~ 130 (301)
T KOG3975|consen 95 VDHKLAFIKEYVPK----DRKIYIIGHSIGAYMVLQILPS 130 (301)
T ss_pred HHHHHHHHHHhCCC----CCEEEEEecchhHHHHHHHhhh
Confidence 4 567778776654 4789999999999999988764
No 139
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.26 E-value=0.0013 Score=47.77 Aligned_cols=69 Identities=13% Similarity=0.085 Sum_probs=41.7
Q ss_pred HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCC-CCCeEEEEcChhHHHHHHHHh
Q psy13951 44 LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGD-PTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 44 ~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d-~~ri~l~G~SaGg~~a~~~~~ 120 (130)
...++|++|+.+||. +... +-......-..+.++++-.++.....++. ..+++++|+|-||+.+...+.
T Consensus 21 ~~L~~GyaVv~pDY~-Glg~-------~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~ 90 (290)
T PF03583_consen 21 AWLARGYAVVAPDYE-GLGT-------PYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAE 90 (290)
T ss_pred HHHHCCCEEEecCCC-CCCC-------cccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHH
Confidence 334679999999997 3211 11111222334445555554443333432 368999999999999987663
No 140
>COG0627 Predicted esterase [General function prediction only]
Probab=97.24 E-value=0.0041 Score=45.75 Aligned_cols=106 Identities=18% Similarity=0.106 Sum_probs=56.2
Q ss_pred CCCCCceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccc-c------------c-cccCCCCCCC-CCCCCCcc
Q psy13951 15 RTYRRHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFR-L------------G-ILGFLRPGVG-SSTVTNFG 78 (130)
Q Consensus 15 ~~~~~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yr-l------------~-~~~~~~~~~~-~~~~~~~~ 78 (130)
...++.||+++.||=.-............ .+...|++++.++=. . + -.+|+..... +....+.+
T Consensus 49 ~m~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q 128 (316)
T COG0627 49 SMGRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQ 128 (316)
T ss_pred ccCCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccc
Confidence 34578899999999211110111223333 667788888887322 1 1 1123222221 11112244
Q ss_pred HHHHHHHHHHHH-HhhhhhCCCC--CCeEEEEcChhHHHHHHHHhCC
Q psy13951 79 IMDQVAALQWIK-DNIEHFGGDP--TSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 79 ~~D~~~a~~~l~-~~~~~~~~d~--~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
+++.+.. -|- .....+..+. ++..|+|+|+||+-|+.+|+..
T Consensus 129 ~~tfl~~--ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~ 173 (316)
T COG0627 129 WETFLTQ--ELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKH 173 (316)
T ss_pred hhHHHHh--hhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhC
Confidence 4444321 111 1112344454 3899999999999999998754
No 141
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.18 E-value=0.0011 Score=46.42 Aligned_cols=40 Identities=18% Similarity=0.339 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 79 IMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 79 ~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
...+..|++++.+....++ .+|.+.|||-||++|..+++.
T Consensus 65 ~~~q~~A~~yl~~~~~~~~---~~i~v~GHSkGGnLA~yaa~~ 104 (224)
T PF11187_consen 65 TPQQKSALAYLKKIAKKYP---GKIYVTGHSKGGNLAQYAAAN 104 (224)
T ss_pred CHHHHHHHHHHHHHHHhCC---CCEEEEEechhhHHHHHHHHH
Confidence 4466788999988777643 469999999999999998874
No 142
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.17 E-value=0.0011 Score=42.40 Aligned_cols=34 Identities=24% Similarity=0.393 Sum_probs=25.3
Q ss_pred HHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 85 ALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 85 a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
..+.+.+...++. ..+|.+.|||.||.+|..+++
T Consensus 50 ~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~ 83 (140)
T PF01764_consen 50 ILDALKELVEKYP--DYSIVITGHSLGGALASLAAA 83 (140)
T ss_dssp HHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHhccc--CccchhhccchHHHHHHHHHH
Confidence 3445555444444 479999999999999998876
No 143
>PF03283 PAE: Pectinacetylesterase
Probab=97.13 E-value=0.0023 Score=47.94 Aligned_cols=97 Identities=14% Similarity=0.105 Sum_probs=56.8
Q ss_pred CceEEEEEeCCCcccCCCCcch-------------hHH----H-hh-------cCCeEEEeeccccccccCCCCCCC--C
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYD-------------GFV----L-AS-------YANMVVVTFNFRLGILGFLRPGVG--S 71 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~-------------~~~----~-~~-------~~g~~vv~~~yrl~~~~~~~~~~~--~ 71 (130)
..-.|||+-||||+.....-.. ... + .. -.++..|.+.|=-+-...+..... .
T Consensus 49 s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~~wN~V~vpYC~Gd~~~G~~~~~~~~ 128 (361)
T PF03283_consen 49 SNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFYNWNHVFVPYCDGDSHSGDVEPVDYG 128 (361)
T ss_pred CceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCccccccEEEEEecCCccccCcccccccC
Confidence 4469999999999876332100 000 1 10 134667777776432111111100 1
Q ss_pred -CCCCCccHHHHHHHHHHHHHh-hhhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 72 -STVTNFGIMDQVAALQWIKDN-IEHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 72 -~~~~~~~~~D~~~a~~~l~~~-~~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
..-+-.+..-+.++++|+.++ .. ++++|+|.|.||||.-+...+
T Consensus 129 ~~~l~frG~~i~~avl~~l~~~gl~----~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 129 GTTLYFRGYRILRAVLDDLLSNGLP----NAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred CceeEeecHHHHHHHHHHHHHhcCc----ccceEEEeccChHHHHHHHHH
Confidence 112233455667888998876 32 589999999999998887654
No 144
>PRK04940 hypothetical protein; Provisional
Probab=97.11 E-value=0.0051 Score=41.65 Aligned_cols=20 Identities=15% Similarity=0.139 Sum_probs=18.1
Q ss_pred CCeEEEEcChhHHHHHHHHh
Q psy13951 101 TSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~ 120 (130)
+++.|+|+|.||+-|..++.
T Consensus 60 ~~~~liGSSLGGyyA~~La~ 79 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGF 79 (180)
T ss_pred CCcEEEEeChHHHHHHHHHH
Confidence 46999999999999999886
No 145
>KOG4667|consensus
Probab=97.10 E-value=0.0047 Score=43.12 Aligned_cols=87 Identities=14% Similarity=0.199 Sum_probs=57.1
Q ss_pred CceEEEEEeCCCcccCCCCc-c-hhHH-HhhcCCeEEEeeccccccccCCCCCCC-CCCCCCccHHHHHHHHHHHHHhhh
Q psy13951 19 RHSVLVIIHGESYSFGSGNI-Y-DGFV-LASYANMVVVTFNFRLGILGFLRPGVG-SSTVTNFGIMDQVAALQWIKDNIE 94 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~-~-~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~-~~~~~~~~~~D~~~a~~~l~~~~~ 94 (130)
..-++|..|| | +.++.. + ...+ ..++.|+.++.+|++- .+.+.+. ....++...+|...+++++.+
T Consensus 32 s~e~vvlcHG--f-rS~Kn~~~~~~vA~~~e~~gis~fRfDF~G----nGeS~gsf~~Gn~~~eadDL~sV~q~~s~--- 101 (269)
T KOG4667|consen 32 STEIVVLCHG--F-RSHKNAIIMKNVAKALEKEGISAFRFDFSG----NGESEGSFYYGNYNTEADDLHSVIQYFSN--- 101 (269)
T ss_pred CceEEEEeec--c-ccccchHHHHHHHHHHHhcCceEEEEEecC----CCCcCCccccCcccchHHHHHHHHHHhcc---
Confidence 3468999999 3 333332 1 1222 5567899999999994 2333222 233445555888899998865
Q ss_pred hhCCCCCC--eEEEEcChhHHHHHHHHh
Q psy13951 95 HFGGDPTS--VTLMGHGTGAASINFLML 120 (130)
Q Consensus 95 ~~~~d~~r--i~l~G~SaGg~~a~~~~~ 120 (130)
.+| =++.|||-||..+...+.
T Consensus 102 -----~nr~v~vi~gHSkGg~Vvl~ya~ 124 (269)
T KOG4667|consen 102 -----SNRVVPVILGHSKGGDVVLLYAS 124 (269)
T ss_pred -----CceEEEEEEeecCccHHHHHHHH
Confidence 233 257899999999988875
No 146
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.01 E-value=0.00087 Score=46.31 Aligned_cols=68 Identities=18% Similarity=0.192 Sum_probs=49.1
Q ss_pred CeEEEeeccccccccCCC-CC-CCCCCCCCccHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 49 NMVVVTFNFRLGILGFLR-PG-VGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 49 g~~vv~~~yrl~~~~~~~-~~-~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
-..|.+|-||-+....+. .. ............|+.+|+++-.++..+ -+-++|+|||-|+.+...|+-
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~----GRPfILaGHSQGs~~l~~LL~ 114 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNN----GRPFILAGHSQGSMHLLRLLK 114 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCC----CCCEEEEEeChHHHHHHHHHH
Confidence 467999999976554433 22 223344566788999999987665532 367999999999999998875
No 147
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=96.99 E-value=0.0012 Score=45.78 Aligned_cols=39 Identities=26% Similarity=0.429 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 79 IMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 79 ~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
++=...|++||+++.. +++++|+|+|.|-||-+|+.++.
T Consensus 3 LEyfe~Ai~~L~~~p~---v~~~~Igi~G~SkGaelALllAs 41 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPE---VDPDKIGIIGISKGAELALLLAS 41 (213)
T ss_dssp CHHHHHHHHHHHCSTT---B--SSEEEEEETHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCC---CCCCCEEEEEECHHHHHHHHHHh
Confidence 4456789999998753 57899999999999999999986
No 148
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=96.93 E-value=0.0014 Score=38.40 Aligned_cols=37 Identities=22% Similarity=0.420 Sum_probs=26.7
Q ss_pred CceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccc
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFR 58 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yr 58 (130)
++.+|+++||-+ .....|..++ ..+++|+.|+..|+|
T Consensus 15 ~k~~v~i~HG~~---eh~~ry~~~a~~L~~~G~~V~~~D~r 52 (79)
T PF12146_consen 15 PKAVVVIVHGFG---EHSGRYAHLAEFLAEQGYAVFAYDHR 52 (79)
T ss_pred CCEEEEEeCCcH---HHHHHHHHHHHHHHhCCCEEEEECCC
Confidence 568999999932 2222455555 556689999999999
No 149
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.92 E-value=0.0097 Score=42.21 Aligned_cols=87 Identities=11% Similarity=0.081 Sum_probs=50.6
Q ss_pred EEEEEeCCCcccCCCC-cchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhh-hhCC
Q psy13951 22 VLVIIHGESYSFGSGN-IYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIE-HFGG 98 (130)
Q Consensus 22 vvv~iHGGg~~~g~~~-~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~-~~~~ 98 (130)
.||.|-||+|+.-... .|+.+. ...+.|++|++.-|..+ ..+-..-.++...++-..+... +.+.
T Consensus 18 gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~t------------fDH~~~A~~~~~~f~~~~~~L~~~~~~ 85 (250)
T PF07082_consen 18 GVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVT------------FDHQAIAREVWERFERCLRALQKRGGL 85 (250)
T ss_pred EEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCC------------CcHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 7999999999765443 355444 33357999999999843 2222222233322222221111 1122
Q ss_pred CCC--CeEEEEcChhHHHHHHHHh
Q psy13951 99 DPT--SVTLMGHGTGAASINFLML 120 (130)
Q Consensus 99 d~~--ri~l~G~SaGg~~a~~~~~ 120 (130)
++. .++=+|||.|+-+-+.+..
T Consensus 86 ~~~~lP~~~vGHSlGcklhlLi~s 109 (250)
T PF07082_consen 86 DPAYLPVYGVGHSLGCKLHLLIGS 109 (250)
T ss_pred CcccCCeeeeecccchHHHHHHhh
Confidence 332 5777999999988877653
No 150
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.84 E-value=0.008 Score=46.46 Aligned_cols=104 Identities=17% Similarity=0.181 Sum_probs=63.5
Q ss_pred CCCCCCceEEEEEeCCCcccCCCC----------------cc--hhHHHhhcCCeEEEeeccccccccCCCC-CCCCCCC
Q psy13951 14 SRTYRRHSVLVIIHGESYSFGSGN----------------IY--DGFVLASYANMVVVTFNFRLGILGFLRP-GVGSSTV 74 (130)
Q Consensus 14 ~~~~~~~Pvvv~iHGGg~~~g~~~----------------~~--~~~~~~~~~g~~vv~~~yrl~~~~~~~~-~~~~~~~ 74 (130)
.+...++|+++|+-||.-+....- .+ +...+..... ++-+|-.++ .||..+ +......
T Consensus 95 ~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~ad--LvFiDqPvG-TGfS~a~~~e~~~d 171 (498)
T COG2939 95 PNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFAD--LVFIDQPVG-TGFSRALGDEKKKD 171 (498)
T ss_pred CCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCc--eEEEecCcc-cCcccccccccccc
Confidence 345567899999999876533111 11 1111222222 555555543 344443 2223344
Q ss_pred CCccHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 75 TNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 75 ~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
....-+|+...++.+.+...++.-.-++.+|+|.|.||+-+..+|.
T Consensus 172 ~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~ 217 (498)
T COG2939 172 FEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAH 217 (498)
T ss_pred hhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHH
Confidence 4455568888888777766666545578999999999998887764
No 151
>KOG3724|consensus
Probab=96.83 E-value=0.0067 Score=49.31 Aligned_cols=40 Identities=23% Similarity=0.235 Sum_probs=28.7
Q ss_pred HHHHHHHHHhhhh-hCCC---CCCeEEEEcChhHHHHHHHHhCC
Q psy13951 83 VAALQWIKDNIEH-FGGD---PTSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 83 ~~a~~~l~~~~~~-~~~d---~~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
.+|++++.+...+ -..+ |..|++.|||+||..|..+++.+
T Consensus 160 ~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlk 203 (973)
T KOG3724|consen 160 NDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLK 203 (973)
T ss_pred HHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhh
Confidence 3566666554433 1223 77899999999999999988765
No 152
>KOG4840|consensus
Probab=96.82 E-value=0.011 Score=41.47 Aligned_cols=66 Identities=21% Similarity=0.228 Sum_probs=48.0
Q ss_pred HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 44 LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 44 ~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.+.+.++.+|.+..|-...||+...... ..+|..++++++.... ....|+++|||-|..-++..++
T Consensus 61 ~lde~~wslVq~q~~Ssy~G~Gt~slk~------D~edl~~l~~Hi~~~~-----fSt~vVL~GhSTGcQdi~yYlT 126 (299)
T KOG4840|consen 61 YLDENSWSLVQPQLRSSYNGYGTFSLKD------DVEDLKCLLEHIQLCG-----FSTDVVLVGHSTGCQDIMYYLT 126 (299)
T ss_pred HHhhccceeeeeeccccccccccccccc------cHHHHHHHHHHhhccC-----cccceEEEecCccchHHHHHHH
Confidence 5677899999999997766666654432 2567777887665322 2458999999999988877764
No 153
>KOG2624|consensus
Probab=96.76 E-value=0.0038 Score=47.34 Aligned_cols=97 Identities=19% Similarity=0.264 Sum_probs=61.7
Q ss_pred CCceEEEEEeC-----CCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCC-C--CC-----CccHHHHHH
Q psy13951 18 RRHSVLVIIHG-----ESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSS-T--VT-----NFGIMDQVA 84 (130)
Q Consensus 18 ~~~Pvvv~iHG-----Gg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~-~--~~-----~~~~~D~~~ 84 (130)
.++|+|++.|| ..|+....+....+ +.+..||-|-.-|-|-...+.-.....+. . -+ +.+..|+-+
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf-~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA 149 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAF-LLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPA 149 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHH-HHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHH
Confidence 78899999999 55555543332222 44557999999998853222111111111 1 11 225567788
Q ss_pred HHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 85 ALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 85 a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.++++.+.- ..+++..+|||.|......++.
T Consensus 150 ~IdyIL~~T-----~~~kl~yvGHSQGtt~~fv~lS 180 (403)
T KOG2624|consen 150 MIDYILEKT-----GQEKLHYVGHSQGTTTFFVMLS 180 (403)
T ss_pred HHHHHHHhc-----cccceEEEEEEccchhheehhc
Confidence 999987654 3689999999999877766553
No 154
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.74 E-value=0.0025 Score=46.19 Aligned_cols=105 Identities=13% Similarity=0.126 Sum_probs=57.3
Q ss_pred CCCCCCCCCCceEEEEEeCCCcccCCCC--cchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCc-cHHHHH-H
Q psy13951 10 SPDSSRTYRRHSVLVIIHGESYSFGSGN--IYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNF-GIMDQV-A 84 (130)
Q Consensus 10 ~p~~~~~~~~~Pvvv~iHGGg~~~g~~~--~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~-~~~D~~-~ 84 (130)
.|+...+..|+||++.+||=-|.....- ..+... ...-...++|.++|--..... .+...+. ..+++. .
T Consensus 88 lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~------~~~~~n~~~~~~L~~e 161 (299)
T COG2382 88 LPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRR------EELHCNEAYWRFLAQE 161 (299)
T ss_pred eCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHH------HHhcccHHHHHHHHHH
Confidence 4555667779999999999555432221 122222 112346788888875310000 0111111 111221 2
Q ss_pred HHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 85 ALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 85 a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.+=++++.... .-+.++-+|+|.|.||..+++.++.
T Consensus 162 LlP~v~~~yp~-~~~a~~r~L~G~SlGG~vsL~agl~ 197 (299)
T COG2382 162 LLPYVEERYPT-SADADGRVLAGDSLGGLVSLYAGLR 197 (299)
T ss_pred hhhhhhccCcc-cccCCCcEEeccccccHHHHHHHhc
Confidence 23344443322 2367788999999999999998873
No 155
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.69 E-value=0.0058 Score=43.72 Aligned_cols=89 Identities=17% Similarity=-0.015 Sum_probs=50.5
Q ss_pred eEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHH-HHHHhhhhhCCC
Q psy13951 21 SVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQ-WIKDNIEHFGGD 99 (130)
Q Consensus 21 Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~-~l~~~~~~~~~d 99 (130)
|.++.||++ .|....|..+...-..-..++.++++.- . ........++|..+.+. -+++.- .
T Consensus 1 ~pLF~fhp~---~G~~~~~~~L~~~l~~~~~v~~l~a~g~----~-----~~~~~~~~l~~~a~~yv~~Ir~~Q-----P 63 (257)
T COG3319 1 PPLFCFHPA---GGSVLAYAPLAAALGPLLPVYGLQAPGY----G-----AGEQPFASLDDMAAAYVAAIRRVQ-----P 63 (257)
T ss_pred CCEEEEcCC---CCcHHHHHHHHHHhccCceeeccccCcc----c-----ccccccCCHHHHHHHHHHHHHHhC-----C
Confidence 568999993 3444445444433333366777777731 1 11222333555554432 222221 1
Q ss_pred CCCeEEEEcChhHHHHHHHHhCCCCCC
Q psy13951 100 PTSVTLMGHGTGAASINFLMLSPLLSP 126 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~~~~~~g 126 (130)
--...|.|+|.||.++..+|......|
T Consensus 64 ~GPy~L~G~S~GG~vA~evA~qL~~~G 90 (257)
T COG3319 64 EGPYVLLGWSLGGAVAFEVAAQLEAQG 90 (257)
T ss_pred CCCEEEEeeccccHHHHHHHHHHHhCC
Confidence 247999999999999999987544443
No 156
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.68 E-value=0.0092 Score=42.14 Aligned_cols=89 Identities=11% Similarity=0.086 Sum_probs=51.5
Q ss_pred CCceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhC
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFG 97 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~ 97 (130)
.+.-++.+=|-||- ...+..+..-....+.++.++|.-- ..........|+.+..+-+.+.+...-
T Consensus 6 ~~~~L~cfP~AGGs----a~~fr~W~~~lp~~iel~avqlPGR----------~~r~~ep~~~di~~Lad~la~el~~~~ 71 (244)
T COG3208 6 ARLRLFCFPHAGGS----ASLFRSWSRRLPADIELLAVQLPGR----------GDRFGEPLLTDIESLADELANELLPPL 71 (244)
T ss_pred CCceEEEecCCCCC----HHHHHHHHhhCCchhheeeecCCCc----------ccccCCcccccHHHHHHHHHHHhcccc
Confidence 34446666666553 3344444432222466888888732 111222334566666666655443211
Q ss_pred CCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 98 GDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 98 ~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.| +-..+.|||+||.+|..+|..
T Consensus 72 ~d-~P~alfGHSmGa~lAfEvArr 94 (244)
T COG3208 72 LD-APFALFGHSMGAMLAFEVARR 94 (244)
T ss_pred CC-CCeeecccchhHHHHHHHHHH
Confidence 12 469999999999999999864
No 157
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=96.65 E-value=0.023 Score=40.60 Aligned_cols=33 Identities=21% Similarity=0.485 Sum_probs=23.3
Q ss_pred HHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 84 AALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 84 ~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.++.+|++ +|+ -+++-++|||+||..+...+..
T Consensus 91 ~vl~~L~~---~Y~--~~~~N~VGHSmGg~~~~~yl~~ 123 (255)
T PF06028_consen 91 KVLKYLKK---KYH--FKKFNLVGHSMGGLSWTYYLEN 123 (255)
T ss_dssp HHHHHHHH---CC----SEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHH---hcC--CCEEeEEEECccHHHHHHHHHH
Confidence 44455543 344 4799999999999999888764
No 158
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.64 E-value=0.0044 Score=45.91 Aligned_cols=38 Identities=16% Similarity=0.395 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 81 DQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 81 D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+..+..+++.+.....+ .+.|.+.|||+||-.+..++.
T Consensus 109 ~~~ql~~~V~~~l~~~g--a~~v~LigHS~GG~~~ry~~~ 146 (336)
T COG1075 109 RGEQLFAYVDEVLAKTG--AKKVNLIGHSMGGLDSRYYLG 146 (336)
T ss_pred cHHHHHHHHHHHHhhcC--CCceEEEeecccchhhHHHHh
Confidence 44555666666555544 378999999999999987654
No 159
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=96.64 E-value=0.027 Score=44.47 Aligned_cols=84 Identities=13% Similarity=0.199 Sum_probs=50.1
Q ss_pred CCceEEEEEeC---CCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHH----HHHHHHH
Q psy13951 18 RRHSVLVIIHG---ESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQV----AALQWIK 90 (130)
Q Consensus 18 ~~~Pvvv~iHG---Gg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~----~a~~~l~ 90 (130)
.+.|++ +++. ..|+..-......+..+.++|+.|+.++.|-. ........++|.. +|++.++
T Consensus 214 ~~~PLL-IVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP----------~~~~r~~~ldDYv~~i~~Ald~V~ 282 (560)
T TIGR01839 214 HARPLL-VVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNP----------DKAHREWGLSTYVDALKEAVDAVR 282 (560)
T ss_pred CCCcEE-EechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCC----------ChhhcCCCHHHHHHHHHHHHHHHH
Confidence 344554 4554 23333222333333366778999999999942 1122344555555 4444444
Q ss_pred HhhhhhCCCCCCeEEEEcChhHHHHHH
Q psy13951 91 DNIEHFGGDPTSVTLMGHGTGAASINF 117 (130)
Q Consensus 91 ~~~~~~~~d~~ri~l~G~SaGg~~a~~ 117 (130)
+.. ..++|.++|+|+||.++++
T Consensus 283 ~~t-----G~~~vnl~GyC~GGtl~a~ 304 (560)
T TIGR01839 283 AIT-----GSRDLNLLGACAGGLTCAA 304 (560)
T ss_pred Hhc-----CCCCeeEEEECcchHHHHH
Confidence 332 2578999999999999986
No 160
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.64 E-value=0.005 Score=40.17 Aligned_cols=22 Identities=23% Similarity=0.317 Sum_probs=19.6
Q ss_pred CCCCeEEEEcChhHHHHHHHHh
Q psy13951 99 DPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 99 d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
...+|.++|||.||.+|..++.
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~ 47 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGL 47 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHH
Confidence 3579999999999999999876
No 161
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.61 E-value=0.023 Score=42.98 Aligned_cols=40 Identities=20% Similarity=0.233 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 80 MDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 80 ~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.|...|+.++.++....+. .-++++.|+|.||+++.+.+-
T Consensus 164 iD~INAl~~l~k~~~~~~~-~lp~I~~G~s~G~yla~l~~k 203 (403)
T PF11144_consen 164 IDIINALLDLKKIFPKNGG-GLPKIYIGSSHGGYLAHLCAK 203 (403)
T ss_pred HHHHHHHHHHHHhhhcccC-CCcEEEEecCcHHHHHHHHHh
Confidence 4666677777776555442 458999999999999998874
No 162
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=96.53 E-value=0.011 Score=40.43 Aligned_cols=81 Identities=16% Similarity=0.242 Sum_probs=48.7
Q ss_pred eEEEEEeC-CCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCcc-HHHHHHHHHHHHHhhhhhC
Q psy13951 21 SVLVIIHG-ESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFG-IMDQVAALQWIKDNIEHFG 97 (130)
Q Consensus 21 Pvvv~iHG-Gg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~-~~D~~~a~~~l~~~~~~~~ 97 (130)
-++|++-| |||.. .....+ ..++.|+.|+-+|-.. ++.. ...|.+ -.|+...++.-.+ +++
T Consensus 3 t~~v~~SGDgGw~~----~d~~~a~~l~~~G~~VvGvdsl~----Yfw~-----~rtP~~~a~Dl~~~i~~y~~---~w~ 66 (192)
T PF06057_consen 3 TLAVFFSGDGGWRD----LDKQIAEALAKQGVPVVGVDSLR----YFWS-----ERTPEQTAADLARIIRHYRA---RWG 66 (192)
T ss_pred EEEEEEeCCCCchh----hhHHHHHHHHHCCCeEEEechHH----HHhh-----hCCHHHHHHHHHHHHHHHHH---HhC
Confidence 36778888 88852 223333 4455799999998653 2222 122222 2355555554443 444
Q ss_pred CCCCCeEEEEcChhHHHHHHHH
Q psy13951 98 GDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 98 ~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
.++++|+|.|.|+-+.-.+.
T Consensus 67 --~~~vvLiGYSFGADvlP~~~ 86 (192)
T PF06057_consen 67 --RKRVVLIGYSFGADVLPFIY 86 (192)
T ss_pred --CceEEEEeecCCchhHHHHH
Confidence 47999999999996665443
No 163
>KOG3967|consensus
Probab=96.48 E-value=0.021 Score=39.88 Aligned_cols=96 Identities=16% Similarity=0.071 Sum_probs=49.6
Q ss_pred CceEEEEEeCCCcccCCCC--------------cchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHH
Q psy13951 19 RHSVLVIIHGESYSFGSGN--------------IYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVA 84 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~--------------~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~ 84 (130)
+..++|.|||.|.+..... +.....-+.+.|+-|+..|-... .-|...-..+..-....++-+.-
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~-~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRE-RKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchh-hhhhhcccCcchhccchHHHHHH
Confidence 3458999999776533211 11111133445655555543211 01222212122222233334433
Q ss_pred HHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 85 ALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 85 a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.+..+. +...++.|+++-||.||.+++-+..
T Consensus 179 vw~~~v-----~pa~~~sv~vvahsyGG~~t~~l~~ 209 (297)
T KOG3967|consen 179 VWKNIV-----LPAKAESVFVVAHSYGGSLTLDLVE 209 (297)
T ss_pred HHHHHh-----cccCcceEEEEEeccCChhHHHHHH
Confidence 333332 2345789999999999999998875
No 164
>PLN02408 phospholipase A1
Probab=96.37 E-value=0.0077 Score=45.10 Aligned_cols=35 Identities=29% Similarity=0.477 Sum_probs=25.5
Q ss_pred HHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 86 LQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 86 ~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
++-+++...+++....+|.++|||.||.||...+.
T Consensus 185 l~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~ 219 (365)
T PLN02408 185 REEIARLLQSYGDEPLSLTITGHSLGAALATLTAY 219 (365)
T ss_pred HHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHH
Confidence 34444445555544457999999999999999876
No 165
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=96.27 E-value=0.025 Score=40.34 Aligned_cols=33 Identities=15% Similarity=0.541 Sum_probs=24.2
Q ss_pred HHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 83 VAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 83 ~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
..++.+|.++ | +-..+-++|||+||......+.
T Consensus 123 k~~msyL~~~---Y--~i~k~n~VGhSmGg~~~~~Y~~ 155 (288)
T COG4814 123 KKAMSYLQKH---Y--NIPKFNAVGHSMGGLGLTYYMI 155 (288)
T ss_pred HHHHHHHHHh---c--CCceeeeeeeccccHHHHHHHH
Confidence 4566666654 3 3468999999999988777765
No 166
>PLN02454 triacylglycerol lipase
Probab=96.27 E-value=0.01 Score=45.09 Aligned_cols=36 Identities=28% Similarity=0.446 Sum_probs=25.2
Q ss_pred HHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 85 ALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 85 a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.+..+++...++.-..-+|.++|||.||.||...|.
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~ 247 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAF 247 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHH
Confidence 344455545555433335999999999999999885
No 167
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.17 E-value=0.054 Score=40.68 Aligned_cols=101 Identities=9% Similarity=0.068 Sum_probs=47.9
Q ss_pred CCCCceEEEEEeCCCcccCCC-------C-c----------chhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCc
Q psy13951 16 TYRRHSVLVIIHGESYSFGSG-------N-I----------YDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNF 77 (130)
Q Consensus 16 ~~~~~Pvvv~iHGGg~~~g~~-------~-~----------~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~ 77 (130)
..+++|+|+|+.||.-+.... + . .+...+.. -..++-+|...+ .||...... ......
T Consensus 36 ~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~--~an~l~iD~PvG-tGfS~~~~~-~~~~~~ 111 (415)
T PF00450_consen 36 DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNK--FANLLFIDQPVG-TGFSYGNDP-SDYVWN 111 (415)
T ss_dssp GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGG--TSEEEEE--STT-STT-EESSG-GGGS-S
T ss_pred CCCCccEEEEecCCceeccccccccccCceEEeeccccccccccccccc--ccceEEEeecCc-eEEeecccc-ccccch
Confidence 445679999999986543211 0 0 00111111 244666676643 233332221 111112
Q ss_pred cHHHHHHHHHHHHHhhhhhCC-CCCCeEEEEcChhHHHHHHHHh
Q psy13951 78 GIMDQVAALQWIKDNIEHFGG-DPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 78 ~~~D~~~a~~~l~~~~~~~~~-d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.-+++.+.+++|++-..++.- ..++++|+|.|.||+.+-.++.
T Consensus 112 ~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~ 155 (415)
T PF00450_consen 112 DDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALAS 155 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHH
Confidence 233344445555543333321 3458999999999998877764
No 168
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=96.04 E-value=0.11 Score=38.85 Aligned_cols=69 Identities=16% Similarity=0.159 Sum_probs=41.9
Q ss_pred cCCeEEEeeccccccccC-CCCCCCCC-----CCCC-ccHHHHHHHHHHHHHhhhhhCCCCCCeE-EEEcChhHHHHHHH
Q psy13951 47 YANMVVVTFNFRLGILGF-LRPGVGSS-----TVTN-FGIMDQVAALQWIKDNIEHFGGDPTSVT-LMGHGTGAASINFL 118 (130)
Q Consensus 47 ~~g~~vv~~~yrl~~~~~-~~~~~~~~-----~~~~-~~~~D~~~a~~~l~~~~~~~~~d~~ri~-l~G~SaGg~~a~~~ 118 (130)
-..+-|++.|---++.|. .++...+. ..+| ..++|+..+-+.+. +.+|++ ++. ++|.|+||+-++..
T Consensus 90 t~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll---~~LGI~--~l~avvGgSmGGMqaleW 164 (368)
T COG2021 90 TERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLL---DALGIK--KLAAVVGGSMGGMQALEW 164 (368)
T ss_pred ccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHH---HhcCcc--eEeeeeccChHHHHHHHH
Confidence 345778888865444232 22222233 2333 45667776665554 455654 555 89999999999887
Q ss_pred Hh
Q psy13951 119 ML 120 (130)
Q Consensus 119 ~~ 120 (130)
+.
T Consensus 165 a~ 166 (368)
T COG2021 165 AI 166 (368)
T ss_pred HH
Confidence 75
No 169
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.92 E-value=0.019 Score=39.98 Aligned_cols=21 Identities=29% Similarity=0.472 Sum_probs=18.8
Q ss_pred CCCeEEEEcChhHHHHHHHHh
Q psy13951 100 PTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~ 120 (130)
..+|.+.|||.||.+|..++.
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~ 147 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLAL 147 (229)
T ss_pred CceEEEEccCHHHHHHHHHHH
Confidence 478999999999999998876
No 170
>PLN02571 triacylglycerol lipase
Probab=95.87 E-value=0.019 Score=43.71 Aligned_cols=37 Identities=24% Similarity=0.390 Sum_probs=24.9
Q ss_pred HHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 85 ALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 85 a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.+..+++...++.-..-+|.++|||.||.||...|..
T Consensus 210 vl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 210 VLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 3344444444443233379999999999999998763
No 171
>PLN02324 triacylglycerol lipase
Probab=95.81 E-value=0.02 Score=43.52 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=23.0
Q ss_pred HHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 89 IKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 89 l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+++....+....-+|.++|||.||.||...|.
T Consensus 203 V~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 203 LKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 34444444433347999999999999999875
No 172
>PLN02802 triacylglycerol lipase
Probab=95.79 E-value=0.02 Score=44.55 Aligned_cols=35 Identities=26% Similarity=0.406 Sum_probs=24.9
Q ss_pred HHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 86 LQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 86 ~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
++-+++...++....-+|.++|||.||.+|...+.
T Consensus 315 l~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~ 349 (509)
T PLN02802 315 VGEVRRLMEKYKGEELSITVTGHSLGAALALLVAD 349 (509)
T ss_pred HHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHH
Confidence 33444444555443458999999999999998876
No 173
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=95.59 E-value=0.03 Score=37.59 Aligned_cols=20 Identities=15% Similarity=0.214 Sum_probs=17.9
Q ss_pred CCCeEEEEcChhHHHHHHHH
Q psy13951 100 PTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~ 119 (130)
.++++++|||.|+.+++..+
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l 73 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWL 73 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHH
T ss_pred CCCeEEEEeCHHHHHHHHHH
Confidence 45699999999999999988
No 174
>PLN02753 triacylglycerol lipase
Probab=95.56 E-value=0.027 Score=43.99 Aligned_cols=36 Identities=31% Similarity=0.390 Sum_probs=26.1
Q ss_pred HHHHHHHhhhhhCCC---CCCeEEEEcChhHHHHHHHHh
Q psy13951 85 ALQWIKDNIEHFGGD---PTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 85 a~~~l~~~~~~~~~d---~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+++.+++...++..+ .-+|.++|||.||.||...|.
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 444455555555432 468999999999999999885
No 175
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=95.49 E-value=0.073 Score=45.65 Aligned_cols=84 Identities=10% Similarity=-0.053 Sum_probs=45.7
Q ss_pred eEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCCC
Q psy13951 21 SVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDP 100 (130)
Q Consensus 21 Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~ 100 (130)
|.++++||.+- ....|....-....++.|+.++.+.- . ........+++..+.+. +.+..... .
T Consensus 1069 ~~l~~lh~~~g---~~~~~~~l~~~l~~~~~v~~~~~~g~----~-----~~~~~~~~l~~la~~~~---~~i~~~~~-~ 1132 (1296)
T PRK10252 1069 PTLFCFHPASG---FAWQFSVLSRYLDPQWSIYGIQSPRP----D-----GPMQTATSLDEVCEAHL---ATLLEQQP-H 1132 (1296)
T ss_pred CCeEEecCCCC---chHHHHHHHHhcCCCCcEEEEECCCC----C-----CCCCCCCCHHHHHHHHH---HHHHhhCC-C
Confidence 56899999542 23334444422234577777776521 1 01112234444443322 21222111 2
Q ss_pred CCeEEEEcChhHHHHHHHHh
Q psy13951 101 TSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~ 120 (130)
.+..+.|||+||.++..++.
T Consensus 1133 ~p~~l~G~S~Gg~vA~e~A~ 1152 (1296)
T PRK10252 1133 GPYHLLGYSLGGTLAQGIAA 1152 (1296)
T ss_pred CCEEEEEechhhHHHHHHHH
Confidence 47999999999999998876
No 176
>KOG2183|consensus
Probab=95.49 E-value=0.059 Score=41.10 Aligned_cols=73 Identities=15% Similarity=0.179 Sum_probs=47.1
Q ss_pred HhhcCCeEEEeeccccccc--cCCCCCCC-CC----CCCCccHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHH
Q psy13951 44 LASYANMVVVTFNFRLGIL--GFLRPGVG-SS----TVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASIN 116 (130)
Q Consensus 44 ~~~~~g~~vv~~~yrl~~~--~~~~~~~~-~~----~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~ 116 (130)
++.+.+..+|.+++|.-.. .|+..... .. ......+.|-...+.++++. .+.....|+++|.|.||++++
T Consensus 106 ~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~---~~a~~~pvIafGGSYGGMLaA 182 (492)
T KOG2183|consen 106 LAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRD---LSAEASPVIAFGGSYGGMLAA 182 (492)
T ss_pred hhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhc---cccccCcEEEecCchhhHHHH
Confidence 6778889999999997311 11111100 11 11233466666777777765 344568899999999999998
Q ss_pred HHH
Q psy13951 117 FLM 119 (130)
Q Consensus 117 ~~~ 119 (130)
.+=
T Consensus 183 WfR 185 (492)
T KOG2183|consen 183 WFR 185 (492)
T ss_pred HHH
Confidence 763
No 177
>PLN02761 lipase class 3 family protein
Probab=95.42 E-value=0.033 Score=43.50 Aligned_cols=35 Identities=31% Similarity=0.447 Sum_probs=24.4
Q ss_pred HHHHHHhhhhhC----CCCCCeEEEEcChhHHHHHHHHh
Q psy13951 86 LQWIKDNIEHFG----GDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 86 ~~~l~~~~~~~~----~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+..+++....++ ....+|.++|||.||.||...+.
T Consensus 275 l~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 275 LAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 444444444442 23358999999999999998875
No 178
>KOG1553|consensus
Probab=95.40 E-value=0.16 Score=38.18 Aligned_cols=65 Identities=15% Similarity=0.229 Sum_probs=43.2
Q ss_pred hcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHH-HHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 46 SYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQV-AALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 46 ~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~-~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.+.|+.|+--|+. ||..+.. .+++.+-.... +++++.. ..++-.+++|++.|+|-||.-++++|.
T Consensus 265 ~~lgYsvLGwNhP----GFagSTG---~P~p~n~~nA~DaVvQfAI---~~Lgf~~edIilygWSIGGF~~~waAs 330 (517)
T KOG1553|consen 265 AQLGYSVLGWNHP----GFAGSTG---LPYPVNTLNAADAVVQFAI---QVLGFRQEDIILYGWSIGGFPVAWAAS 330 (517)
T ss_pred HHhCceeeccCCC----CccccCC---CCCcccchHHHHHHHHHHH---HHcCCCccceEEEEeecCCchHHHHhh
Confidence 3468888888877 4444433 23333332333 3345544 445667899999999999999999886
No 179
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=95.32 E-value=0.29 Score=38.48 Aligned_cols=91 Identities=18% Similarity=0.110 Sum_probs=59.8
Q ss_pred CCCCceEEEEE----eCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHH
Q psy13951 16 TYRRHSVLVII----HGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKD 91 (130)
Q Consensus 16 ~~~~~Pvvv~i----HGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~ 91 (130)
...|+|+||.= ||-| +.|.+. ....-.+.+.|-.|..+.+. ++......++|+..+..-..+
T Consensus 65 d~~krP~vViDPRAGHGpG-IGGFK~-dSevG~AL~~GHPvYFV~F~------------p~P~pgQTl~DV~~ae~~Fv~ 130 (581)
T PF11339_consen 65 DPTKRPFVVIDPRAGHGPG-IGGFKP-DSEVGVALRAGHPVYFVGFF------------PEPEPGQTLEDVMRAEAAFVE 130 (581)
T ss_pred CCCCCCeEEeCCCCCCCCC-ccCCCc-ccHHHHHHHcCCCeEEEEec------------CCCCCCCcHHHHHHHHHHHHH
Confidence 34577888876 5522 222222 33444666678888888777 333444568899877654444
Q ss_pred hhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 92 NIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 92 ~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
...+.+-+..+.+|+|...||-++++++.
T Consensus 131 ~V~~~hp~~~kp~liGnCQgGWa~~mlAA 159 (581)
T PF11339_consen 131 EVAERHPDAPKPNLIGNCQGGWAAMMLAA 159 (581)
T ss_pred HHHHhCCCCCCceEEeccHHHHHHHHHHh
Confidence 44445555559999999999999999886
No 180
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=95.20 E-value=0.18 Score=38.85 Aligned_cols=21 Identities=10% Similarity=0.199 Sum_probs=17.4
Q ss_pred CCCeEEEEcChhHHHHHHHHh
Q psy13951 100 PTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.+.++|+|+|.||+.+-.++.
T Consensus 164 ~~~~yi~GESYaG~yvP~la~ 184 (433)
T PLN03016 164 SNPLYVVGDSYSGMIVPALVQ 184 (433)
T ss_pred CCCEEEEccCccceehHHHHH
Confidence 467999999999997777654
No 181
>PLN02719 triacylglycerol lipase
Probab=95.10 E-value=0.046 Score=42.65 Aligned_cols=36 Identities=31% Similarity=0.497 Sum_probs=25.0
Q ss_pred HHHHHHHhhhhhC---CCCCCeEEEEcChhHHHHHHHHh
Q psy13951 85 ALQWIKDNIEHFG---GDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 85 a~~~l~~~~~~~~---~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
++..+++....|. ...-+|.++|||.||.||...|.
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 3444444444443 12358999999999999999875
No 182
>PLN00413 triacylglycerol lipase
Probab=95.05 E-value=0.049 Score=42.15 Aligned_cols=21 Identities=24% Similarity=0.343 Sum_probs=18.4
Q ss_pred CCCeEEEEcChhHHHHHHHHh
Q psy13951 100 PTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~ 120 (130)
..+|.++|||.||.+|...+.
T Consensus 283 ~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 283 TSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred CCeEEEEecCHHHHHHHHHHH
Confidence 458999999999999998874
No 183
>PLN02310 triacylglycerol lipase
Probab=95.02 E-value=0.052 Score=41.28 Aligned_cols=20 Identities=30% Similarity=0.356 Sum_probs=18.0
Q ss_pred CCeEEEEcChhHHHHHHHHh
Q psy13951 101 TSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~ 120 (130)
.+|.++|||.||.+|...+.
T Consensus 209 ~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred ceEEEEcccHHHHHHHHHHH
Confidence 57999999999999998875
No 184
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=94.97 E-value=0.13 Score=39.94 Aligned_cols=89 Identities=15% Similarity=0.229 Sum_probs=59.7
Q ss_pred CCceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEee-ccccccccCCCCCCCCCCCCCccHHHHHH-HHHHHHHhhhh
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTF-NFRLGILGFLRPGVGSSTVTNFGIMDQVA-ALQWIKDNIEH 95 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~-~yrl~~~~~~~~~~~~~~~~~~~~~D~~~-a~~~l~~~~~~ 95 (130)
-|.|+.||+-| ....+.+....+.++.|+..+.+ |-|+....|+- +-++..+ .++-+++....
T Consensus 287 ~KPPL~VYFSG----yR~aEGFEgy~MMk~Lg~PfLL~~DpRleGGaFYl-----------Gs~eyE~~I~~~I~~~L~~ 351 (511)
T TIGR03712 287 FKPPLNVYFSG----YRPAEGFEGYFMMKRLGAPFLLIGDPRLEGGAFYL-----------GSDEYEQGIINVIQEKLDY 351 (511)
T ss_pred CCCCeEEeecc----CcccCcchhHHHHHhcCCCeEEeeccccccceeee-----------CcHHHHHHHHHHHHHHHHH
Confidence 35689999988 22356666777777778766554 66764322222 2223332 23344566677
Q ss_pred hCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 96 FGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 96 ~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
++-+.+.++|.|-|||-+=|+..+..
T Consensus 352 LgF~~~qLILSGlSMGTfgAlYYga~ 377 (511)
T TIGR03712 352 LGFDHDQLILSGLSMGTFGALYYGAK 377 (511)
T ss_pred hCCCHHHeeeccccccchhhhhhccc
Confidence 88899999999999999999988763
No 185
>KOG2984|consensus
Probab=94.97 E-value=0.034 Score=38.68 Aligned_cols=85 Identities=14% Similarity=0.173 Sum_probs=54.7
Q ss_pred EEEEEeCCCcccCCCCcchhHH---HhhcCCeEEEeeccccccccCCCCCCCCCCCC--CccHHHHHHHHHHHHHhhhhh
Q psy13951 22 VLVIIHGESYSFGSGNIYDGFV---LASYANMVVVTFNFRLGILGFLRPGVGSSTVT--NFGIMDQVAALQWIKDNIEHF 96 (130)
Q Consensus 22 vvv~iHGGg~~~g~~~~~~~~~---~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~--~~~~~D~~~a~~~l~~~~~~~ 96 (130)
.|+.+.| ..|+.......+ +.....+++|+.|-+ |++.+-. |+..+ ...++|...|++.++..
T Consensus 44 ~iLlipG---alGs~~tDf~pql~~l~k~l~~TivawDPp----GYG~SrP-P~Rkf~~~ff~~Da~~avdLM~aL---- 111 (277)
T KOG2984|consen 44 YILLIPG---ALGSYKTDFPPQLLSLFKPLQVTIVAWDPP----GYGTSRP-PERKFEVQFFMKDAEYAVDLMEAL---- 111 (277)
T ss_pred eeEeccc---ccccccccCCHHHHhcCCCCceEEEEECCC----CCCCCCC-CcccchHHHHHHhHHHHHHHHHHh----
Confidence 5677777 345444333333 334455888888766 5555544 44444 34467888888866532
Q ss_pred CCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 97 GGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 97 ~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+.+++.|+|+|-||-.++.+|.
T Consensus 112 --k~~~fsvlGWSdGgiTalivAa 133 (277)
T KOG2984|consen 112 --KLEPFSVLGWSDGGITALIVAA 133 (277)
T ss_pred --CCCCeeEeeecCCCeEEEEeec
Confidence 4689999999999988776654
No 186
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=94.75 E-value=0.064 Score=41.31 Aligned_cols=21 Identities=19% Similarity=0.400 Sum_probs=18.4
Q ss_pred CCCeEEEEcChhHHHHHHHHh
Q psy13951 100 PTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.+++.|+|||+||.++..++.
T Consensus 161 ~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 161 GKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred CCCEEEEEECHhHHHHHHHHH
Confidence 368999999999999998765
No 187
>PLN02209 serine carboxypeptidase
Probab=94.73 E-value=0.29 Score=37.78 Aligned_cols=21 Identities=10% Similarity=0.167 Sum_probs=17.0
Q ss_pred CCCeEEEEcChhHHHHHHHHh
Q psy13951 100 PTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.+.++|+|+|.||+-+-.++.
T Consensus 166 ~~~~yi~GESYaG~yvP~~a~ 186 (437)
T PLN02209 166 SNPFYVVGDSYSGMIVPALVH 186 (437)
T ss_pred CCCEEEEecCcCceehHHHHH
Confidence 457999999999987766653
No 188
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.68 E-value=0.07 Score=41.74 Aligned_cols=21 Identities=29% Similarity=0.347 Sum_probs=18.4
Q ss_pred CCCeEEEEcChhHHHHHHHHh
Q psy13951 100 PTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~ 120 (130)
..+|.|+|||.||.||...|.
T Consensus 317 ~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 317 EVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred cceEEEeccCHHHHHHHHHHH
Confidence 357999999999999998875
No 189
>PLN02934 triacylglycerol lipase
Probab=94.50 E-value=0.069 Score=41.67 Aligned_cols=20 Identities=20% Similarity=0.298 Sum_probs=18.1
Q ss_pred CCeEEEEcChhHHHHHHHHh
Q psy13951 101 TSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~ 120 (130)
.+|.++|||.||.+|..++.
T Consensus 321 ~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 321 AKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred CeEEEeccccHHHHHHHHHH
Confidence 68999999999999998874
No 190
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=94.44 E-value=0.029 Score=44.43 Aligned_cols=97 Identities=15% Similarity=0.074 Sum_probs=61.6
Q ss_pred CceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCC--CCCCCCccHHHHHHHHHHHHHhhhh
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVG--SSTVTNFGIMDQVAALQWIKDNIEH 95 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~--~~~~~~~~~~D~~~a~~~l~~~~~~ 95 (130)
+.|.+||-.|| |...-...+.... +.-+.|-+.|..|-|-+. -|++.-.. .........+|-.++.++|.+..-
T Consensus 420 ~~pTll~aYGG-F~vsltP~fs~~~~~WLerGg~~v~ANIRGGG-EfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgi- 496 (648)
T COG1505 420 ENPTLLYAYGG-FNISLTPRFSGSRKLWLERGGVFVLANIRGGG-EFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGI- 496 (648)
T ss_pred CCceEEEeccc-cccccCCccchhhHHHHhcCCeEEEEecccCC-ccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCC-
Confidence 56888888875 5554444454444 444568888888999431 12111100 122333446788888888876432
Q ss_pred hCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 96 FGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 96 ~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
..|+++.+.|-|-||-++...++
T Consensus 497 --tspe~lgi~GgSNGGLLvg~alT 519 (648)
T COG1505 497 --TSPEKLGIQGGSNGGLLVGAALT 519 (648)
T ss_pred --CCHHHhhhccCCCCceEEEeeec
Confidence 26899999999999988766554
No 191
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=94.37 E-value=0.23 Score=35.57 Aligned_cols=98 Identities=10% Similarity=0.163 Sum_probs=48.9
Q ss_pred CCCCCCCCceEEEEEeCCCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCC-CCCCCCccHHHHHHHHHHH
Q psy13951 12 DSSRTYRRHSVLVIIHGESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVG-SSTVTNFGIMDQVAALQWI 89 (130)
Q Consensus 12 ~~~~~~~~~Pvvv~iHGGg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~-~~~~~~~~~~D~~~a~~~l 89 (130)
++.+..++.|.||.-.| |.. ....+...+ ..+..|+.|+..|.-- +-+.+.+. .+.....+..|...+++|+
T Consensus 22 P~~~~~~~~~tiliA~G--f~r-rmdh~agLA~YL~~NGFhViRyDsl~---HvGlSsG~I~eftms~g~~sL~~V~dwl 95 (294)
T PF02273_consen 22 PKNNEPKRNNTILIAPG--FAR-RMDHFAGLAEYLSANGFHVIRYDSLN---HVGLSSGDINEFTMSIGKASLLTVIDWL 95 (294)
T ss_dssp --TTS---S-EEEEE-T--T-G-GGGGGHHHHHHHHTTT--EEEE---B----------------HHHHHHHHHHHHHHH
T ss_pred CCCCCcccCCeEEEecc--hhH-HHHHHHHHHHHHhhCCeEEEeccccc---cccCCCCChhhcchHHhHHHHHHHHHHH
Confidence 34455566789999888 221 122333444 5566899999877541 11122221 3334445667888899999
Q ss_pred HHhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 90 KDNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 90 ~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.+.. .+++.|.-.|.-|-+|...+..
T Consensus 96 ~~~g------~~~~GLIAaSLSaRIAy~Va~~ 121 (294)
T PF02273_consen 96 ATRG------IRRIGLIAASLSARIAYEVAAD 121 (294)
T ss_dssp HHTT---------EEEEEETTHHHHHHHHTTT
T ss_pred HhcC------CCcchhhhhhhhHHHHHHHhhc
Confidence 8432 4689999999999998887664
No 192
>PLN02847 triacylglycerol lipase
Probab=94.14 E-value=0.094 Score=41.73 Aligned_cols=21 Identities=19% Similarity=0.458 Sum_probs=18.6
Q ss_pred CCeEEEEcChhHHHHHHHHhC
Q psy13951 101 TSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~~ 121 (130)
-+|.++|||.||.+|+.+++.
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 489999999999999998763
No 193
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=94.03 E-value=0.11 Score=35.84 Aligned_cols=40 Identities=25% Similarity=0.361 Sum_probs=28.3
Q ss_pred cHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 78 GIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 78 ~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
...+..++++++.+...+.+ .-.+|+|+|.||.+|+.++.
T Consensus 82 ~~~~~~~sl~~l~~~i~~~G---PfdGvlGFSQGA~lAa~ll~ 121 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENG---PFDGVLGFSQGAALAALLLA 121 (212)
T ss_dssp GG---HHHHHHHHHHHHHH------SEEEEETHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHhcC---CeEEEEeecHHHHHHHHHHH
Confidence 35677788888888776643 25789999999999998875
No 194
>PLN02162 triacylglycerol lipase
Probab=93.95 E-value=0.12 Score=40.01 Aligned_cols=21 Identities=24% Similarity=0.287 Sum_probs=18.1
Q ss_pred CCCeEEEEcChhHHHHHHHHh
Q psy13951 100 PTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~ 120 (130)
..++.++|||.||.+|...+.
T Consensus 277 ~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 277 NLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred CceEEEEecChHHHHHHHHHH
Confidence 468999999999999988754
No 195
>KOG3043|consensus
Probab=93.92 E-value=0.38 Score=33.88 Aligned_cols=71 Identities=18% Similarity=0.225 Sum_probs=48.2
Q ss_pred HhhcCCeEEEeeccccc-cccCC--CCCCC---CCCCCCccHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHH
Q psy13951 44 LASYANMVVVTFNFRLG-ILGFL--RPGVG---SSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINF 117 (130)
Q Consensus 44 ~~~~~g~~vv~~~yrl~-~~~~~--~~~~~---~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~ 117 (130)
..+..|+.|+.||+-.+ |+.-. ....+ .....+....|+...++|++.+ .++.+|.++|.-.||..+..
T Consensus 62 k~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~-----g~~kkIGv~GfCwGak~vv~ 136 (242)
T KOG3043|consen 62 KVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNH-----GDSKKIGVVGFCWGAKVVVT 136 (242)
T ss_pred HHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHc-----CCcceeeEEEEeecceEEEE
Confidence 44556999999999765 11111 00000 2344566678999999999844 46799999999999987765
Q ss_pred HH
Q psy13951 118 LM 119 (130)
Q Consensus 118 ~~ 119 (130)
+.
T Consensus 137 ~~ 138 (242)
T KOG3043|consen 137 LS 138 (242)
T ss_pred ee
Confidence 54
No 196
>PF03991 Prion_octapep: Copper binding octapeptide repeat; InterPro: IPR020949 Prion protein (PrP-c) [, , ] is a small glycoprotein found in high quantity in the brain of animals infected with certain degenerative neurological diseases, such as sheep scrapie and bovine spongiform encephalopathy (BSE), and the human dementias Creutzfeldt-Jacob disease (CJD) and Gerstmann-Straussler syndrome (GSS). PrP-c is encoded in the host genome and is expressed both in normal and infected cells. During infection, however, the PrP-c molecule become altered (conformationally rather than at the amino acid level) to an abnormal isoform, PrP-sc. In detergent-treated brain extracts from infected individuals, fibrils composed of polymers of PrP-sc, namely scrapie-associated fibrils or prion rods, can be evidenced by electron microscopy. The precise function of the normal PrP isoform in healthy individuals remains unknown. Several results, mainly obtained in transgenic animals, indicate that PrP-c might play a role in long-term potentiation, in sleep physiology, in oxidative burst compensation (PrP can fix four Cu2+ through its octarepeat domain), in interactions with the extracellular matrix (PrP-c can bind to the precursor of the laminin receptor, LRP), in apoptosis and in signal transduction (costimulation of PrP-c induces a modulation of Fyn kinase phosphorylation) []. The normal isoform, PrP-c, is anchored at the cell membrane, in rafts, through a glycosyl phosphatidyl inositol (GPI); its half-life at the cell surface is 5 h, after which the protein is internalised through a caveolae-dependent mechanism and degraded in the endolysosome compartment. Conversion between PrP-c and PrP-sc occurs likely during the internalisation process. This repeat is found at the amino terminus of mammalian prion proteins. It has been shown to bind to copper [].
Probab=93.87 E-value=0.023 Score=18.56 Aligned_cols=6 Identities=33% Similarity=0.927 Sum_probs=4.9
Q ss_pred eCCCcc
Q psy13951 27 HGESYS 32 (130)
Q Consensus 27 HGGg~~ 32 (130)
|||+|.
T Consensus 2 hgG~Wg 7 (8)
T PF03991_consen 2 HGGGWG 7 (8)
T ss_pred CCCcCC
Confidence 899884
No 197
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=93.68 E-value=0.25 Score=37.39 Aligned_cols=39 Identities=13% Similarity=0.231 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 81 DQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 81 D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
+...-++-+.+.+.+.. .++++|+|||+||.++..++..
T Consensus 101 ~~~~~lk~~ie~~~~~~--~~kv~li~HSmGgl~~~~fl~~ 139 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKN--GKKVVLIAHSMGGLVARYFLQW 139 (389)
T ss_pred HHHHHHHHHHHHHHHhc--CCcEEEEEeCCCchHHHHHHHh
Confidence 34444444444433322 5799999999999999887753
No 198
>KOG2182|consensus
Probab=93.04 E-value=1.5 Score=34.34 Aligned_cols=97 Identities=12% Similarity=0.042 Sum_probs=55.2
Q ss_pred CceEEEEEeCCCcccCC---CCcchhHHHhhcCCeEEEeeccccccccCCCCCCC--CCCCC---CccHHHHHHHHHHHH
Q psy13951 19 RHSVLVIIHGESYSFGS---GNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVG--SSTVT---NFGIMDQVAALQWIK 90 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~---~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~--~~~~~---~~~~~D~~~a~~~l~ 90 (130)
.-|+.++|-|-|=.... .+......+|.+.|..|+.+++|.-... .+.... +.... ...+.|+...++.+
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S-~P~~~~st~nlk~LSs~QALaDla~fI~~~- 162 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQS-SPIGDLSTSNLKYLSSLQALADLAEFIKAM- 162 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccC-CCCCCCcccchhhhhHHHHHHHHHHHHHHH-
Confidence 45898988884433311 1223344488999999999999963111 111110 11111 11333444443333
Q ss_pred HhhhhhCC-CCCCeEEEEcChhHHHHHHHH
Q psy13951 91 DNIEHFGG-DPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 91 ~~~~~~~~-d~~ri~l~G~SaGg~~a~~~~ 119 (130)
-.+++. |+.+.+.+|-|.-|.|++.+=
T Consensus 163 --n~k~n~~~~~~WitFGgSYsGsLsAW~R 190 (514)
T KOG2182|consen 163 --NAKFNFSDDSKWITFGGSYSGSLSAWFR 190 (514)
T ss_pred --HhhcCCCCCCCeEEECCCchhHHHHHHH
Confidence 233433 345999999999999998864
No 199
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=92.99 E-value=0.33 Score=32.83 Aligned_cols=43 Identities=19% Similarity=0.234 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh--CCCCCCC
Q psy13951 79 IMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML--SPLLSPS 127 (130)
Q Consensus 79 ~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~--~~~~~g~ 127 (130)
++|..+.+.--.+ .-++.++|++||.|+-+++..+- +..+.|.
T Consensus 43 ~~dWi~~l~~~v~------a~~~~~vlVAHSLGc~~v~h~~~~~~~~V~Ga 87 (181)
T COG3545 43 LDDWIARLEKEVN------AAEGPVVLVAHSLGCATVAHWAEHIQRQVAGA 87 (181)
T ss_pred HHHHHHHHHHHHh------ccCCCeEEEEecccHHHHHHHHHhhhhccceE
Confidence 4566665553322 22455999999999999988774 3344443
No 200
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=92.87 E-value=0.16 Score=38.72 Aligned_cols=77 Identities=16% Similarity=0.163 Sum_probs=44.6
Q ss_pred eEEEEEeC-CCcccCCCCcchhHH-HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCC
Q psy13951 21 SVLVIIHG-ESYSFGSGNIYDGFV-LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGG 98 (130)
Q Consensus 21 Pvvv~iHG-Gg~~~g~~~~~~~~~-~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~ 98 (130)
-+-||+-| |||..-+++ .. ...+.|+.||-+|-- .|+++...|+ ..-.|....+++-.+ +|+
T Consensus 261 ~~av~~SGDGGWr~lDk~----v~~~l~~~gvpVvGvdsL----RYfW~~rtPe----~~a~Dl~r~i~~y~~---~w~- 324 (456)
T COG3946 261 TVAVFYSGDGGWRDLDKE----VAEALQKQGVPVVGVDSL----RYFWSERTPE----QIAADLSRLIRFYAR---RWG- 324 (456)
T ss_pred eEEEEEecCCchhhhhHH----HHHHHHHCCCceeeeehh----hhhhccCCHH----HHHHHHHHHHHHHHH---hhC-
Confidence 45566666 777643322 22 445679999988632 3444332222 112355555554443 344
Q ss_pred CCCCeEEEEcChhHHH
Q psy13951 99 DPTSVTLMGHGTGAAS 114 (130)
Q Consensus 99 d~~ri~l~G~SaGg~~ 114 (130)
..|+.|.|.|.|+-+
T Consensus 325 -~~~~~liGySfGADv 339 (456)
T COG3946 325 -AKRVLLIGYSFGADV 339 (456)
T ss_pred -cceEEEEeecccchh
Confidence 479999999999754
No 201
>KOG4569|consensus
Probab=92.43 E-value=0.17 Score=37.61 Aligned_cols=22 Identities=27% Similarity=0.365 Sum_probs=19.2
Q ss_pred CCCeEEEEcChhHHHHHHHHhC
Q psy13951 100 PTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.-+|.+.|||.||.||...+..
T Consensus 170 ~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 170 NYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred CcEEEEecCChHHHHHHHHHHH
Confidence 3679999999999999998863
No 202
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=92.15 E-value=0.19 Score=37.28 Aligned_cols=38 Identities=21% Similarity=0.173 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 80 MDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 80 ~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
..+..|+++|.++.+. -++|+++|+|-|++++-.+|..
T Consensus 105 ~nI~~AYrFL~~~yep----GD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 105 QNIREAYRFLIFNYEP----GDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHHHHhcCC----CCeEEEeeccchhHHHHHHHHH
Confidence 3566888888877643 4799999999999999888753
No 203
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=92.14 E-value=1.5 Score=33.80 Aligned_cols=65 Identities=14% Similarity=0.171 Sum_probs=42.3
Q ss_pred hHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHH-----HHHHHHHHhhhhhCCCCCCeEEEEcChhHHHH
Q psy13951 41 GFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQV-----AALQWIKDNIEHFGGDPTSVTLMGHGTGAASI 115 (130)
Q Consensus 41 ~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~-----~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a 115 (130)
...++.++|..|..++.+- | ........++|.+ .+++-+++... .++|.+.|++.||+++
T Consensus 131 ~V~~l~~~g~~vfvIsw~n-P---------d~~~~~~~~edYi~e~l~~aid~v~~itg-----~~~InliGyCvGGtl~ 195 (445)
T COG3243 131 LVRWLLEQGLDVFVISWRN-P---------DASLAAKNLEDYILEGLSEAIDTVKDITG-----QKDINLIGYCVGGTLL 195 (445)
T ss_pred HHHHHHHcCCceEEEeccC-c---------hHhhhhccHHHHHHHHHHHHHHHHHHHhC-----ccccceeeEecchHHH
Confidence 3447788899999998883 1 1111133344443 55555554432 3799999999999988
Q ss_pred HHHHh
Q psy13951 116 NFLML 120 (130)
Q Consensus 116 ~~~~~ 120 (130)
..++.
T Consensus 196 ~~ala 200 (445)
T COG3243 196 AAALA 200 (445)
T ss_pred HHHHH
Confidence 87764
No 204
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=91.57 E-value=1.5 Score=30.76 Aligned_cols=66 Identities=18% Similarity=0.169 Sum_probs=36.5
Q ss_pred CeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 49 NMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 49 g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
|+....++|.-+ |++........+...+.+-.+.+. +.+.......++++++|.|.|+..+...+.
T Consensus 2 ~~~~~~V~YPa~---f~P~~g~~~~t~~~Sv~~G~~~L~---~ai~~~~~~~~~vvV~GySQGA~Va~~~~~ 67 (225)
T PF08237_consen 2 GYNVVAVDYPAS---FWPVTGIGSPTYDESVAEGVANLD---AAIRAAIAAGGPVVVFGYSQGAVVASNVLR 67 (225)
T ss_pred CcceEEecCCch---hcCcCCCCCCccchHHHHHHHHHH---HHHHhhccCCCCEEEEEECHHHHHHHHHHH
Confidence 456777787732 222111122233444444444433 333322225688999999999999887654
No 205
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=91.51 E-value=4.3 Score=29.87 Aligned_cols=22 Identities=32% Similarity=0.537 Sum_probs=18.9
Q ss_pred CCeEEEEcChhHHHHHHHHhCC
Q psy13951 101 TSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
.+|+|+|++.|+++++.++...
T Consensus 193 ~~ivlIg~G~gA~~~~~~la~~ 214 (310)
T PF12048_consen 193 KNIVLIGHGTGAGWAARYLAEK 214 (310)
T ss_pred ceEEEEEeChhHHHHHHHHhcC
Confidence 5699999999999999987643
No 206
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=91.00 E-value=2.5 Score=28.60 Aligned_cols=24 Identities=21% Similarity=0.472 Sum_probs=20.3
Q ss_pred CCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 98 GDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 98 ~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
....++.++|||+|.-++...+..
T Consensus 106 ~~~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 106 GPDAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CCCCCEEEEEecchhHHHHHHhhh
Confidence 456799999999999999888765
No 207
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=90.95 E-value=0.48 Score=34.23 Aligned_cols=37 Identities=19% Similarity=0.247 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 80 MDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 80 ~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
..+..++.++.++.. .-++|.++|+|-|+..|-.++-
T Consensus 75 ~~I~~ay~~l~~~~~----~gd~I~lfGFSRGA~~AR~~a~ 111 (277)
T PF09994_consen 75 ARIRDAYRFLSKNYE----PGDRIYLFGFSRGAYTARAFAN 111 (277)
T ss_pred HHHHHHHHHHHhccC----CcceEEEEecCccHHHHHHHHH
Confidence 355678888876653 3478999999999999988874
No 208
>KOG1282|consensus
Probab=90.72 E-value=1.3 Score=34.50 Aligned_cols=32 Identities=9% Similarity=0.276 Sum_probs=21.7
Q ss_pred HHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 86 LQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 86 ~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.+|+.+. .+| ..+.++|+|.|.+|+-+=.+|.
T Consensus 156 ~~wf~kf-Pey--~~~~fyI~GESYAG~YVP~La~ 187 (454)
T KOG1282|consen 156 QKWFEKF-PEY--KSNDFYIAGESYAGHYVPALAQ 187 (454)
T ss_pred HHHHHhC-hhh--cCCCeEEecccccceehHHHHH
Confidence 3455543 233 2468999999999987766664
No 209
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=88.89 E-value=0.72 Score=33.87 Aligned_cols=20 Identities=30% Similarity=0.471 Sum_probs=18.2
Q ss_pred CCeEEEEcChhHHHHHHHHh
Q psy13951 101 TSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~ 120 (130)
.+|.+.|||.||.+|..+..
T Consensus 276 a~iwlTGHSLGGa~AsLlG~ 295 (425)
T COG5153 276 ARIWLTGHSLGGAIASLLGI 295 (425)
T ss_pred ceEEEeccccchHHHHHhcc
Confidence 78999999999999998865
No 210
>KOG4540|consensus
Probab=88.89 E-value=0.72 Score=33.87 Aligned_cols=20 Identities=30% Similarity=0.471 Sum_probs=18.2
Q ss_pred CCeEEEEcChhHHHHHHHHh
Q psy13951 101 TSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~ 120 (130)
.+|.+.|||.||.+|..+..
T Consensus 276 a~iwlTGHSLGGa~AsLlG~ 295 (425)
T KOG4540|consen 276 ARIWLTGHSLGGAIASLLGI 295 (425)
T ss_pred ceEEEeccccchHHHHHhcc
Confidence 78999999999999998865
No 211
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=87.27 E-value=2.6 Score=34.02 Aligned_cols=21 Identities=19% Similarity=0.244 Sum_probs=18.3
Q ss_pred CCCeEEEEcChhHHHHHHHHh
Q psy13951 100 PTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~ 120 (130)
-++++|+|||+|+.++..++.
T Consensus 212 gkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHH
Confidence 368999999999999998764
No 212
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=87.06 E-value=2.7 Score=28.71 Aligned_cols=30 Identities=17% Similarity=0.284 Sum_probs=23.0
Q ss_pred HHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 86 LQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 86 ~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
-+|+.+.+. |-+..+.|.|+||++++.+..
T Consensus 91 erYv~eEal-----pgs~~~sgcsmGayhA~nfvf 120 (227)
T COG4947 91 ERYVIEEAL-----PGSTIVSGCSMGAYHAANFVF 120 (227)
T ss_pred HHHHHHhhc-----CCCccccccchhhhhhhhhhe
Confidence 456766543 466889999999999998765
No 213
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=86.85 E-value=1.9 Score=29.06 Aligned_cols=21 Identities=24% Similarity=0.319 Sum_probs=18.2
Q ss_pred CCeEEEEcChhHHHHHHHHhC
Q psy13951 101 TSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.+|+|+|.|.|+.++..++..
T Consensus 81 ~kivl~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 81 TKIVLAGYSQGAMVVGDALSG 101 (179)
T ss_dssp SEEEEEEETHHHHHHHHHHHH
T ss_pred CCEEEEecccccHHHHHHHHh
Confidence 589999999999999887653
No 214
>KOG2369|consensus
Probab=86.72 E-value=2.8 Score=32.64 Aligned_cols=37 Identities=16% Similarity=0.357 Sum_probs=24.6
Q ss_pred HHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 83 VAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 83 ~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
...++-..+..-+.+. -++|+|++||+|+.++.+.+.
T Consensus 165 l~kLK~~iE~~~~~~G-~kkVvlisHSMG~l~~lyFl~ 201 (473)
T KOG2369|consen 165 LSKLKKKIETMYKLNG-GKKVVLISHSMGGLYVLYFLK 201 (473)
T ss_pred HHHHHHHHHHHHHHcC-CCceEEEecCCccHHHHHHHh
Confidence 3444444443333332 278999999999999998875
No 215
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=86.12 E-value=3.4 Score=30.42 Aligned_cols=39 Identities=10% Similarity=0.050 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 80 MDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 80 ~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+|...+++-..+...+| ..+..+|+|.|.||+.+-.++.
T Consensus 32 ~d~~~fL~~Ff~~~p~~--~~~~fyI~GESYaG~YiP~la~ 70 (319)
T PLN02213 32 KRTHEFLQKWLSRHPQY--FSNPLYVVGDSYSGMIVPALVQ 70 (319)
T ss_pred HHHHHHHHHHHHhCccc--ccCCeEEEeeccccchHHHHHH
Confidence 45555554333333333 3578999999999998877764
No 216
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=86.10 E-value=2.6 Score=24.52 Aligned_cols=39 Identities=15% Similarity=0.268 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 80 MDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 80 ~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+.+.+.++|+++.... --|+++.+.|.|.|=.++..++.
T Consensus 21 ~~V~~qI~yvk~~~~~--~GpK~VLViGaStGyGLAsRIa~ 59 (78)
T PF12242_consen 21 RNVENQIEYVKSQGKI--NGPKKVLVIGASTGYGLASRIAA 59 (78)
T ss_dssp HHHHHHHHHHHHC-----TS-SEEEEES-SSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCC--CCCceEEEEecCCcccHHHHHHH
Confidence 4667888888875433 23789999999999999877654
No 217
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=85.90 E-value=3 Score=30.36 Aligned_cols=20 Identities=10% Similarity=0.228 Sum_probs=17.0
Q ss_pred CCeEEEEcChhHHHHHHHHh
Q psy13951 101 TSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~ 120 (130)
+-+.++|+|-||.++-.++.
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq 99 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQ 99 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHH
T ss_pred cceeeeeeccccHHHHHHHH
Confidence 57999999999999988875
No 218
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=85.68 E-value=4.9 Score=26.47 Aligned_cols=21 Identities=19% Similarity=0.328 Sum_probs=17.7
Q ss_pred CCCeEEEEcChhHHHHHHHHh
Q psy13951 100 PTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~ 120 (130)
..++.+.|||+||.++..++.
T Consensus 63 ~~~~~l~g~s~Gg~~a~~~a~ 83 (212)
T smart00824 63 GRPFVLVGHSSGGLLAHAVAA 83 (212)
T ss_pred CCCeEEEEECHHHHHHHHHHH
Confidence 357899999999999977765
No 219
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=82.02 E-value=7.2 Score=28.53 Aligned_cols=87 Identities=11% Similarity=0.059 Sum_probs=46.8
Q ss_pred EEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccc--cCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCC-C
Q psy13951 23 LVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGIL--GFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGG-D 99 (130)
Q Consensus 23 vv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~--~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~-d 99 (130)
|+---|-||+-... .+.+.+...-++.+++..|...|. .|.. ......+-..+.++-+.+....+.- +
T Consensus 37 V~~pTGtGWVdp~a--~~a~E~l~~GD~A~va~QYSylPSw~sfl~-------dr~~a~~a~~aL~~aV~~~~~~lP~~~ 107 (289)
T PF10081_consen 37 VATPTGTGWVDPWA--VDALEYLYGGDVAIVAMQYSYLPSWLSFLV-------DRDAAREAARALFEAVYARWSTLPEDR 107 (289)
T ss_pred EEcCCCCCccCHHH--HhHHHHHhCCCeEEEEeccccccchHHHhc-------ccchHHHHHHHHHHHHHHHHHhCCccc
Confidence 33335666654222 233334455689999999986421 1111 1112222333444445444444432 3
Q ss_pred CCCeEEEEcChhHHHHHHH
Q psy13951 100 PTSVTLMGHGTGAASINFL 118 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~ 118 (130)
.-|++|.|.|.|++-+...
T Consensus 108 RPkL~l~GeSLGa~g~~~a 126 (289)
T PF10081_consen 108 RPKLYLYGESLGAYGGEAA 126 (289)
T ss_pred CCeEEEeccCccccchhhh
Confidence 5679999999998766543
No 220
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=81.99 E-value=3.1 Score=31.20 Aligned_cols=21 Identities=43% Similarity=0.687 Sum_probs=17.4
Q ss_pred CCCeEEEEcChhHHHHHHHHh
Q psy13951 100 PTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.+.|.|+|||.|+-++...+.
T Consensus 219 ~RpVtLvG~SLGarvI~~cL~ 239 (345)
T PF05277_consen 219 ERPVTLVGHSLGARVIYYCLL 239 (345)
T ss_pred CCceEEEeecccHHHHHHHHH
Confidence 356999999999988877765
No 221
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=79.07 E-value=8.6 Score=26.75 Aligned_cols=62 Identities=8% Similarity=0.048 Sum_probs=33.1
Q ss_pred hcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCC-CCCeEEEEcChhHHHHHHHHh
Q psy13951 46 SYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGD-PTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 46 ~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d-~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.+.|+.++.+..+... + ..+. ..+..+++.+.+...+...+ +.+|.+-.+|.||......+.
T Consensus 24 ~~~g~~il~~~~~~~~--~---------~~~~--~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnGG~~~~~~l~ 86 (240)
T PF05705_consen 24 QDPGFDILLVTSPPAD--F---------FWPS--KRLAPAADKLLELLSDSQSASPPPILFHSFSNGGSFLYSQLL 86 (240)
T ss_pred HhcCCeEEEEeCCHHH--H---------eeec--cchHHHHHHHHHHhhhhccCCCCCEEEEEEECchHHHHHHHH
Confidence 4478888887665421 1 1110 23333344333333332222 248999999997766655443
No 222
>KOG3253|consensus
Probab=78.42 E-value=7.3 Score=31.68 Aligned_cols=22 Identities=23% Similarity=0.296 Sum_probs=17.1
Q ss_pred CCCeEEEEcChhHHHHHHHHhC
Q psy13951 100 PTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
-..|+|+|.|+|+-+++++..+
T Consensus 249 ha~IiLvGrsmGAlVachVSps 270 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPS 270 (784)
T ss_pred CCceEEEecccCceeeEEeccc
Confidence 4679999999997777666543
No 223
>KOG2541|consensus
Probab=77.08 E-value=26 Score=25.63 Aligned_cols=64 Identities=13% Similarity=0.104 Sum_probs=38.0
Q ss_pred HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 44 LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 44 ~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+-.-.|..+.+++---+ -...+-..+.++.+..+-..++..+ -++-+.++|.|.||..+-.++.
T Consensus 48 l~~~~g~~v~~leig~g----------~~~s~l~pl~~Qv~~~ce~v~~m~~---lsqGynivg~SQGglv~Raliq 111 (296)
T KOG2541|consen 48 LEELPGSPVYCLEIGDG----------IKDSSLMPLWEQVDVACEKVKQMPE---LSQGYNIVGYSQGGLVARALIQ 111 (296)
T ss_pred HHhCCCCeeEEEEecCC----------cchhhhccHHHHHHHHHHHHhcchh---ccCceEEEEEccccHHHHHHHH
Confidence 33455777777654322 1223333455655554433333333 2577999999999999988875
No 224
>KOG2551|consensus
Probab=74.80 E-value=5.9 Score=27.94 Aligned_cols=34 Identities=29% Similarity=0.427 Sum_probs=24.4
Q ss_pred HHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 84 AALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 84 ~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.++++|.+.+.+.| --=.|.|+|-|+.|+.+++.
T Consensus 90 esl~yl~~~i~enG---PFDGllGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 90 ESLEYLEDYIKENG---PFDGLLGFSQGAALAALLAG 123 (230)
T ss_pred HHHHHHHHHHHHhC---CCccccccchhHHHHHHhhc
Confidence 45666666655533 12358999999999999987
No 225
>KOG2565|consensus
Probab=74.68 E-value=37 Score=26.24 Aligned_cols=88 Identities=15% Similarity=0.159 Sum_probs=46.6
Q ss_pred CceEEEEEeCCCcccCCCCcchhHHHhhc---------CCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHH
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFVLASY---------ANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWI 89 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~---------~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l 89 (130)
..| ++.+|| |-....+.+..+.+... .-+-|++|.-. |++.++. +...+-. +.+..+-+
T Consensus 152 v~P-lLl~HG--wPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlP----GygwSd~-~sk~GFn----~~a~Arvm 219 (469)
T KOG2565|consen 152 VKP-LLLLHG--WPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLP----GYGWSDA-PSKTGFN----AAATARVM 219 (469)
T ss_pred ccc-eEEecC--CCchHHHHHhhhhhhcCccccCCccceeEEEeccCCC----CcccCcC-CccCCcc----HHHHHHHH
Confidence 344 567899 43323333433332211 12456666543 5555544 3333321 22233334
Q ss_pred HHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 90 KDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 90 ~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
++..-++| -++..|-|.-.|.-++..++.
T Consensus 220 rkLMlRLg--~nkffiqGgDwGSiI~snlas 248 (469)
T KOG2565|consen 220 RKLMLRLG--YNKFFIQGGDWGSIIGSNLAS 248 (469)
T ss_pred HHHHHHhC--cceeEeecCchHHHHHHHHHh
Confidence 44455554 468999988899988888774
No 226
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=74.49 E-value=36 Score=25.92 Aligned_cols=109 Identities=14% Similarity=0.152 Sum_probs=60.1
Q ss_pred CCCceEEEEEeCCC---cccCCCCcchhHH--HhhcCCeEEEeeccc-cccccCCCC-------------------CCCC
Q psy13951 17 YRRHSVLVIIHGES---YSFGSGNIYDGFV--LASYANMVVVTFNFR-LGILGFLRP-------------------GVGS 71 (130)
Q Consensus 17 ~~~~Pvvv~iHGGg---~~~g~~~~~~~~~--~~~~~g~~vv~~~yr-l~~~~~~~~-------------------~~~~ 71 (130)
......+++|-||. +.....+...... +|...|.+|+.+..- -.|..|... ..++
T Consensus 61 ~~~~~all~i~gG~~~~~~~~~~~~~~~~~~~~A~~t~siv~~l~qvPNQpl~f~~d~~~r~ED~iIAytW~~fl~~~d~ 140 (367)
T PF10142_consen 61 KNPDTALLFITGGSNRNWPGPPPDFDDELLQMIARATGSIVAILYQVPNQPLTFDNDPKPRTEDAIIAYTWRKFLETGDP 140 (367)
T ss_pred CCCceEEEEEECCcccCCCCCCCcchHHHHHHHHHhcCCEEEEeCcCCCCCeEeCCCCccccHHHHHHHHHHHHhccCCc
Confidence 34557999999998 2222222222222 777888877765321 111111110 1111
Q ss_pred CCCCCccH-HHHHHHHHHHHHhhhh-hCCCCCCeEEEEcChhHHHHHHHHh-CCCCC
Q psy13951 72 STVTNFGI-MDQVAALQWIKDNIEH-FGGDPTSVTLMGHGTGAASINFLML-SPLLS 125 (130)
Q Consensus 72 ~~~~~~~~-~D~~~a~~~l~~~~~~-~~~d~~ri~l~G~SaGg~~a~~~~~-~~~~~ 125 (130)
+.+...++ .-+..|++-+.+...+ .+.+.++.+|+|.|=-|-.+...++ .++..
T Consensus 141 ~w~l~~PMtka~vrAMD~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~D~RV~ 197 (367)
T PF10142_consen 141 EWPLHLPMTKAAVRAMDAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAVDPRVK 197 (367)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhccCccee
Confidence 22222222 2344566655554444 4678899999999999999988876 44443
No 227
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=71.45 E-value=20 Score=28.12 Aligned_cols=95 Identities=11% Similarity=0.030 Sum_probs=50.8
Q ss_pred EEEEeCCCcccCCCCcc--hhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHH--------HHHHHHHHHh
Q psy13951 23 LVIIHGESYSFGSGNIY--DGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQ--------VAALQWIKDN 92 (130)
Q Consensus 23 vv~iHGGg~~~g~~~~~--~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~--------~~a~~~l~~~ 92 (130)
++.+=||||..+..... .....+..+|+++++-|--....... ....-...+..+.|. ..+-+.|.+
T Consensus 31 ~~~~GgGG~~G~i~~~~~~~~~~~~~~~G~A~~~TD~Gh~~~~~~--~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~- 107 (474)
T PF07519_consen 31 FLQVGGGGFAGGINYADGKASMATALARGYATASTDSGHQGSAGS--DDASFGNNPEALLDFAYRALHETTVVAKALIE- 107 (474)
T ss_pred eEEECCCeeeCcccccccccccchhhhcCeEEEEecCCCCCCccc--ccccccCCHHHHHHHHhhHHHHHHHHHHHHHH-
Confidence 66777788854333322 11335556799999876432211100 000011111122222 112222222
Q ss_pred hhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 93 IEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 93 ~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.-|+..|++-+..|.|-||--.++.++.
T Consensus 108 -~~Yg~~p~~sY~~GcS~GGRqgl~~AQr 135 (474)
T PF07519_consen 108 -AFYGKAPKYSYFSGCSTGGRQGLMAAQR 135 (474)
T ss_pred -HHhCCCCCceEEEEeCCCcchHHHHHHh
Confidence 2367789999999999999999998873
No 228
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=70.26 E-value=8.6 Score=27.01 Aligned_cols=34 Identities=15% Similarity=0.157 Sum_probs=23.9
Q ss_pred HHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhCC
Q psy13951 85 ALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 85 a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
+++.+.++ ++.++.-.+.|-|||+..++.++...
T Consensus 17 Vl~~L~e~----gi~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 17 VLSLLIEA----GVINETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHc----CCCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 44555443 34455568999999999999988643
No 229
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=70.25 E-value=7.6 Score=27.62 Aligned_cols=17 Identities=24% Similarity=0.384 Sum_probs=15.3
Q ss_pred EEEcChhHHHHHHHHhC
Q psy13951 105 LMGHGTGAASINFLMLS 121 (130)
Q Consensus 105 l~G~SaGg~~a~~~~~~ 121 (130)
+.|.|+|+-.++.++..
T Consensus 34 i~GtSAGAl~aa~~a~g 50 (245)
T cd07218 34 ISGASAGALAACCLLCD 50 (245)
T ss_pred EEEEcHHHHHHHHHHhC
Confidence 99999999999988864
No 230
>PLN02606 palmitoyl-protein thioesterase
Probab=67.48 E-value=44 Score=24.79 Aligned_cols=20 Identities=10% Similarity=0.127 Sum_probs=17.4
Q ss_pred CCeEEEEcChhHHHHHHHHh
Q psy13951 101 TSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~ 120 (130)
+-+.++|+|-||..+-.++.
T Consensus 95 ~G~naIGfSQGglflRa~ie 114 (306)
T PLN02606 95 EGYNIVAESQGNLVARGLIE 114 (306)
T ss_pred CceEEEEEcchhHHHHHHHH
Confidence 46889999999999988875
No 231
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=67.44 E-value=5.7 Score=22.07 Aligned_cols=14 Identities=14% Similarity=0.491 Sum_probs=7.8
Q ss_pred CCCCCceEEEEEeC
Q psy13951 15 RTYRRHSVLVIIHG 28 (130)
Q Consensus 15 ~~~~~~Pvvv~iHG 28 (130)
+..+++|+|++.||
T Consensus 38 ~~~~~k~pVll~HG 51 (63)
T PF04083_consen 38 NQNKKKPPVLLQHG 51 (63)
T ss_dssp TTTTT--EEEEE--
T ss_pred ccCCCCCcEEEECC
Confidence 45567899999999
No 232
>PF14314 Methyltrans_Mon: Virus-capping methyltransferase
Probab=67.16 E-value=9.8 Score=31.20 Aligned_cols=41 Identities=12% Similarity=0.278 Sum_probs=34.4
Q ss_pred HHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhCCCCCCCCC
Q psy13951 89 IKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSPLLSPSYD 129 (130)
Q Consensus 89 l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~~~~~g~~~ 129 (130)
++.....+++.+......|+-.||..++.+-..|..+++|.
T Consensus 312 lRsIL~~~~i~~~d~l~~GDGSGGita~lLR~~p~sr~iFN 352 (675)
T PF14314_consen 312 LRSILKNLNIKYRDALCGGDGSGGITACLLRMNPTSRGIFN 352 (675)
T ss_pred HHHHHHhcCCCcceeEEEecCchHHHHHHHHhCcccceeee
Confidence 45556677888888888999999999999999998888874
No 233
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=66.71 E-value=33 Score=25.14 Aligned_cols=93 Identities=16% Similarity=0.173 Sum_probs=41.9
Q ss_pred CceEEEEEeCCCcccCCCCcchhHH-----HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhh
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFV-----LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNI 93 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~-----~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~ 93 (130)
++|++|-+|-=|. .....+..+. ---...+.++-+|-.-- -.....-+..-..-.+++..+.+..+.++
T Consensus 22 ~kp~ilT~HDvGl--Nh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGq---e~ga~~~p~~y~yPsmd~LAe~l~~Vl~~- 95 (283)
T PF03096_consen 22 NKPAILTYHDVGL--NHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQ---EEGAATLPEGYQYPSMDQLAEMLPEVLDH- 95 (283)
T ss_dssp TS-EEEEE--TT----HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTT---STT-----TT-----HHHHHCTHHHHHHH-
T ss_pred CCceEEEeccccc--cchHHHHHHhcchhHHHHhhceEEEEEeCCCC---CCCcccccccccccCHHHHHHHHHHHHHh-
Confidence 6799999998331 1111122221 01124677777765421 11111101111112344444555555444
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
|++ +.++-+|--|||++-+.+|+.
T Consensus 96 --f~l--k~vIg~GvGAGAnIL~rfAl~ 119 (283)
T PF03096_consen 96 --FGL--KSVIGFGVGAGANILARFALK 119 (283)
T ss_dssp --HT-----EEEEEETHHHHHHHHHHHH
T ss_pred --CCc--cEEEEEeeccchhhhhhcccc
Confidence 443 679999999999999988873
No 234
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=66.41 E-value=11 Score=24.92 Aligned_cols=32 Identities=16% Similarity=0.186 Sum_probs=22.2
Q ss_pred HHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 84 AALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 84 ~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
-+++++.+. +..++ .+.|.|+|+.+++.++..
T Consensus 17 Gvl~~L~~~----~~~~d--~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 17 GVLKALEEA----GIPID--IVSGTSAGAIVGALYAAG 48 (175)
T ss_pred HHHHHHHHc----CCCee--EEEEECHHHHHHHHHHcC
Confidence 345555443 33444 689999999999988853
No 235
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=65.80 E-value=11 Score=26.26 Aligned_cols=22 Identities=23% Similarity=0.413 Sum_probs=17.7
Q ss_pred CCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 97 GGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 97 ~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+++++ .+.|.|+|+.+++.++.
T Consensus 26 gi~~~--~i~GtSaGAi~aa~~a~ 47 (221)
T cd07210 26 GLEPS--AISGTSAGALVGGLFAS 47 (221)
T ss_pred CCCce--EEEEeCHHHHHHHHHHc
Confidence 44444 59999999999998886
No 236
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=64.96 E-value=11 Score=29.02 Aligned_cols=23 Identities=17% Similarity=0.189 Sum_probs=18.6
Q ss_pred hCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 96 FGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 96 ~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
.++.|+ ++.|.|+|+.+++.++.
T Consensus 98 ~gl~p~--vIsGTSaGAivAal~as 120 (421)
T cd07230 98 ANLLPR--IISGSSAGSIVAAILCT 120 (421)
T ss_pred cCCCCC--EEEEECHHHHHHHHHHc
Confidence 355664 69999999999998876
No 237
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=64.57 E-value=11 Score=24.32 Aligned_cols=20 Identities=25% Similarity=0.335 Sum_probs=16.2
Q ss_pred eEEEEcChhHHHHHHHHhCC
Q psy13951 103 VTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 103 i~l~G~SaGg~~a~~~~~~~ 122 (130)
-.+.|.|+||-+++.++...
T Consensus 29 d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 29 DVISGTSAGALNAALLALGY 48 (204)
T ss_dssp SEEEEECCHHHHHHHHHTC-
T ss_pred cEEEEcChhhhhHHHHHhCC
Confidence 45899999999998888753
No 238
>KOG2931|consensus
Probab=61.69 E-value=65 Score=24.01 Aligned_cols=39 Identities=28% Similarity=0.277 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhCC
Q psy13951 79 IMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 79 ~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~~ 122 (130)
++|..+.+-.+.++.. -+-|+=+|--||+++-+..|+..
T Consensus 105 md~LAd~l~~VL~~f~-----lk~vIg~GvGAGAyIL~rFAl~h 143 (326)
T KOG2931|consen 105 MDDLADMLPEVLDHFG-----LKSVIGMGVGAGAYILARFALNH 143 (326)
T ss_pred HHHHHHHHHHHHHhcC-----cceEEEecccccHHHHHHHHhcC
Confidence 4555555655555442 36788899999999999998754
No 239
>KOG2029|consensus
Probab=60.69 E-value=55 Score=26.80 Aligned_cols=22 Identities=27% Similarity=0.498 Sum_probs=17.7
Q ss_pred CCCCeEEEEcChhHHHHHHHHh
Q psy13951 99 DPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 99 d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
|-+-|.-.|||+||-++=.+++
T Consensus 524 ~~RPivwI~HSmGGLl~K~lLl 545 (697)
T KOG2029|consen 524 DDRPIVWIGHSMGGLLAKKLLL 545 (697)
T ss_pred CCCceEEEecccchHHHHHHHH
Confidence 4566888999999988877665
No 240
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=60.59 E-value=16 Score=24.48 Aligned_cols=23 Identities=26% Similarity=0.325 Sum_probs=17.9
Q ss_pred CCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 97 GGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 97 ~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
++.+ =.+.|.|+|+.+++.++..
T Consensus 25 ~~~~--d~i~GtSaGai~aa~~a~g 47 (194)
T cd07207 25 GILK--KRVAGTSAGAITAALLALG 47 (194)
T ss_pred CCCc--ceEEEECHHHHHHHHHHcC
Confidence 4444 3589999999999988863
No 241
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=58.77 E-value=29 Score=26.80 Aligned_cols=58 Identities=12% Similarity=0.209 Sum_probs=37.8
Q ss_pred CeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 49 NMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 49 g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
|+.|..+|.+-.. ..+.......++|..+ ++.+-+...+ ++ +.++|.+.||.+++.++
T Consensus 129 g~dVYl~DW~~p~-------~vp~~~~~f~ldDYi~---~l~~~i~~~G--~~-v~l~GvCqgG~~~laa~ 186 (406)
T TIGR01849 129 DHDVYITDWVNAR-------MVPLSAGKFDLEDYID---YLIEFIRFLG--PD-IHVIAVCQPAVPVLAAV 186 (406)
T ss_pred CCcEEEEeCCCCC-------CCchhcCCCCHHHHHH---HHHHHHHHhC--CC-CcEEEEchhhHHHHHHH
Confidence 8889999988430 0022346667788874 4444333333 33 99999999999877654
No 242
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=58.43 E-value=17 Score=23.94 Aligned_cols=32 Identities=16% Similarity=0.216 Sum_probs=22.0
Q ss_pred HHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 84 AALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 84 ~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
-+++.+.++ ++. -=.+.|.|+|+..++.++..
T Consensus 15 Gvl~aL~e~----gi~--~d~v~GtSaGAi~aa~~a~g 46 (172)
T cd07198 15 GVAKALRER----GPL--IDIIAGTSAGAIVAALLASG 46 (172)
T ss_pred HHHHHHHHc----CCC--CCEEEEECHHHHHHHHHHcC
Confidence 345555543 333 34589999999999988864
No 243
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=58.42 E-value=17 Score=26.02 Aligned_cols=24 Identities=21% Similarity=0.585 Sum_probs=18.8
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
.++++.|+ ++.|||.|-..++.++
T Consensus 77 ~~~Gi~p~--~~~GhSlGE~aA~~~a 100 (298)
T smart00827 77 RSWGVRPD--AVVGHSLGEIAAAYVA 100 (298)
T ss_pred HHcCCccc--EEEecCHHHHHHHHHh
Confidence 45677665 7999999998887765
No 244
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=56.81 E-value=20 Score=25.35 Aligned_cols=19 Identities=16% Similarity=0.293 Sum_probs=16.4
Q ss_pred EEEEcChhHHHHHHHHhCC
Q psy13951 104 TLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 104 ~l~G~SaGg~~a~~~~~~~ 122 (130)
.+.|.|+|+..++.++...
T Consensus 34 ~i~GtSAGAl~aa~~a~g~ 52 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGV 52 (243)
T ss_pred EEEEEcHHHHHHHHHHhCC
Confidence 7999999999999888643
No 245
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=55.90 E-value=60 Score=24.96 Aligned_cols=15 Identities=0% Similarity=-0.172 Sum_probs=9.9
Q ss_pred HhhcCCeEEEeeccc
Q psy13951 44 LASYANMVVVTFNFR 58 (130)
Q Consensus 44 ~~~~~g~~vv~~~yr 58 (130)
...+.|+.++-+..-
T Consensus 141 ~L~~~G~~ii~P~~g 155 (399)
T PRK05579 141 TLRSRGVEIIGPASG 155 (399)
T ss_pred HHHHCCCEEECCCCc
Confidence 445578888877543
No 246
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=55.78 E-value=12 Score=24.81 Aligned_cols=18 Identities=17% Similarity=0.191 Sum_probs=15.6
Q ss_pred EEEEcChhHHHHHHHHhC
Q psy13951 104 TLMGHGTGAASINFLMLS 121 (130)
Q Consensus 104 ~l~G~SaGg~~a~~~~~~ 121 (130)
.+.|.|+|+.+++.++..
T Consensus 31 ~i~GtSaGAi~aa~~a~g 48 (175)
T cd07228 31 IIAGSSIGALVGALYAAG 48 (175)
T ss_pred EEEEeCHHHHHHHHHHcC
Confidence 589999999999888764
No 247
>PF06059 DUF930: Domain of Unknown Function (DUF930); InterPro: IPR009273 This is a family of bacterial proteins with undetermined function. All bacteria in this family are from the Rhizobiales order.
Probab=55.75 E-value=9.8 Score=23.37 Aligned_cols=57 Identities=12% Similarity=0.098 Sum_probs=36.5
Q ss_pred CCCCCCCCCCCCCCCCceEEEEEeCCCcccCCCCc-chhHHHhhcCCeEEEeeccccc
Q psy13951 4 NLPEALSPDSSRTYRRHSVLVIIHGESYSFGSGNI-YDGFVLASYANMVVVTFNFRLG 60 (130)
Q Consensus 4 ~~p~~~~p~~~~~~~~~Pvvv~iHGGg~~~g~~~~-~~~~~~~~~~g~~vv~~~yrl~ 60 (130)
.-|+.+.+.......-.-.+|-.-||+|..+.... ....|-.......|++++|+++
T Consensus 29 ~~Pd~l~~~~~~~~~~~g~~l~a~gaAFRs~g~WY~l~F~C~vd~d~~~V~sF~~~vG 86 (101)
T PF06059_consen 29 FKPDRLPSYAFSDPKISGNVLDAPGAAFRSRGKWYDLSFRCEVDPDATKVTSFSFKVG 86 (101)
T ss_pred CCCccccccccCCccccCCEEecCCcEEecCCeEEEEEEEEEECCCceEEEEEeeccC
Confidence 34555554444444445678899999987665542 2223344556788999999986
No 248
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=55.10 E-value=22 Score=27.58 Aligned_cols=88 Identities=10% Similarity=0.126 Sum_probs=46.5
Q ss_pred CceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhh-C
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHF-G 97 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~-~ 97 (130)
.+|.|++--| +......... ......+..-++++||. |.++ ...+.+|...+++++..-..+....+ .
T Consensus 62 drPtV~~T~G--Y~~~~~p~r~--Ept~Lld~NQl~vEhRf----F~~S---rP~p~DW~~Lti~QAA~D~Hri~~A~K~ 130 (448)
T PF05576_consen 62 DRPTVLYTEG--YNVSTSPRRS--EPTQLLDGNQLSVEHRF----FGPS---RPEPADWSYLTIWQAASDQHRIVQAFKP 130 (448)
T ss_pred CCCeEEEecC--cccccCcccc--chhHhhccceEEEEEee----ccCC---CCCCCCcccccHhHhhHHHHHHHHHHHh
Confidence 4688887777 2221111111 23333445588999994 2222 23345565556655443222211111 1
Q ss_pred CCCCCeEEEEcChhHHHHHH
Q psy13951 98 GDPTSVTLMGHGTGAASINF 117 (130)
Q Consensus 98 ~d~~ri~l~G~SaGg~~a~~ 117 (130)
+=+.+-+-.|-|=||+.++.
T Consensus 131 iY~~kWISTG~SKGGmTa~y 150 (448)
T PF05576_consen 131 IYPGKWISTGGSKGGMTAVY 150 (448)
T ss_pred hccCCceecCcCCCceeEEE
Confidence 22578999999999987653
No 249
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=54.94 E-value=25 Score=26.22 Aligned_cols=40 Identities=13% Similarity=0.214 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 80 MDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 80 ~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
..+.+-++|++.....- --|+|+.+.|.|.|=.+++.+++
T Consensus 22 ~nV~~QI~y~k~~gp~~-ngPKkVLviGaSsGyGLa~RIsa 61 (398)
T COG3007 22 ANVLQQIDYVKAAGPIK-NGPKKVLVIGASSGYGLAARISA 61 (398)
T ss_pred HHHHHHHHHHHhcCCcc-CCCceEEEEecCCcccHHHHHHH
Confidence 36677888887654332 24899999999999999888765
No 250
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=54.54 E-value=13 Score=26.25 Aligned_cols=26 Identities=27% Similarity=0.507 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhhhhhCCCCCCeEEEEcCh
Q psy13951 82 QVAALQWIKDNIEHFGGDPTSVTLMGHGT 110 (130)
Q Consensus 82 ~~~a~~~l~~~~~~~~~d~~ri~l~G~Sa 110 (130)
-..|++|+.+ ++++++++++++|+|.
T Consensus 166 K~~Al~~L~~---~~~~~~~~vl~aGDSg 191 (247)
T PF05116_consen 166 KGAALRYLME---RWGIPPEQVLVAGDSG 191 (247)
T ss_dssp HHHHHHHHHH---HHT--GGGEEEEESSG
T ss_pred HHHHHHHHHH---HhCCCHHHEEEEeCCC
Confidence 3478888875 4567889999999995
No 251
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=53.94 E-value=15 Score=20.60 Aligned_cols=16 Identities=25% Similarity=0.677 Sum_probs=13.5
Q ss_pred hhhCCCCCCeEEEEcC
Q psy13951 94 EHFGGDPTSVTLMGHG 109 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~S 109 (130)
..+++++++++++|+|
T Consensus 15 ~~~~~~~~~~~~VGD~ 30 (75)
T PF13242_consen 15 KRLGVDPSRCVMVGDS 30 (75)
T ss_dssp HHHTSGGGGEEEEESS
T ss_pred HHcCCCHHHEEEEcCC
Confidence 3457789999999999
No 252
>PF12566 DUF3748: Protein of unknown function (DUF3748); InterPro: IPR022223 This domain family is found in bacteria and eukaryotes, and is approximately 120 amino acids in length.
Probab=53.84 E-value=17 Score=22.87 Aligned_cols=28 Identities=18% Similarity=0.191 Sum_probs=17.0
Q ss_pred eEEEEEeCCCcccCCCCcchhHHHhhcCCeEE
Q psy13951 21 SVLVIIHGESYSFGSGNIYDGFVLASYANMVV 52 (130)
Q Consensus 21 Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~v 52 (130)
|-++|||| -...+..+...+-.+.|++|
T Consensus 14 ~ryvFIHG----pe~pd~~w~YdfhhRrGViv 41 (122)
T PF12566_consen 14 PRYVFIHG----PENPDAEWQYDFHHRRGVIV 41 (122)
T ss_pred ceEEEEeC----CCCCCCCCccccccceeEEE
Confidence 47999999 33333333444556667665
No 253
>PLN02633 palmitoyl protein thioesterase family protein
Probab=53.77 E-value=91 Score=23.27 Aligned_cols=20 Identities=15% Similarity=0.233 Sum_probs=17.4
Q ss_pred CCeEEEEcChhHHHHHHHHh
Q psy13951 101 TSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~~~ 120 (130)
+-+.++|+|-||..+-.++.
T Consensus 94 ~G~naIGfSQGGlflRa~ie 113 (314)
T PLN02633 94 QGYNIVGRSQGNLVARGLIE 113 (314)
T ss_pred CcEEEEEEccchHHHHHHHH
Confidence 46899999999999988775
No 254
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=52.93 E-value=31 Score=25.87 Aligned_cols=17 Identities=24% Similarity=0.360 Sum_probs=15.4
Q ss_pred EEEEcChhHHHHHHHHh
Q psy13951 104 TLMGHGTGAASINFLML 120 (130)
Q Consensus 104 ~l~G~SaGg~~a~~~~~ 120 (130)
.+.|.|+||-++++++.
T Consensus 46 liaGTStGgiiA~~la~ 62 (349)
T cd07214 46 VIAGTSTGGLITAMLTA 62 (349)
T ss_pred EEeeCCHHHHHHHHHhc
Confidence 58999999999999886
No 255
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=51.15 E-value=26 Score=24.95 Aligned_cols=23 Identities=26% Similarity=0.244 Sum_probs=17.6
Q ss_pred hhC-CCCCCeEEEEcChhHHHHHHHH
Q psy13951 95 HFG-GDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 95 ~~~-~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
+.+ ++|+ .+.|||.|=..|+.++
T Consensus 78 ~~g~i~p~--~v~GhS~GE~aAa~~a 101 (290)
T TIGR00128 78 EQGGLKPD--FAAGHSLGEYSALVAA 101 (290)
T ss_pred HcCCCCCC--EEeecCHHHHHHHHHh
Confidence 445 6665 7999999998887765
No 256
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=51.13 E-value=24 Score=25.94 Aligned_cols=31 Identities=13% Similarity=0.103 Sum_probs=21.4
Q ss_pred HHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 85 ALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 85 a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
+++.+.++ ++.++ .+.|.|+|+.+++.++..
T Consensus 33 vL~aLee~----gi~~d--~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 33 VIKALEEA----GIPVD--MVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHHc----CCCCC--EEEEECHHHHHHHHHHcC
Confidence 34444443 55443 488999999999988764
No 257
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=50.57 E-value=26 Score=24.79 Aligned_cols=18 Identities=17% Similarity=0.353 Sum_probs=15.7
Q ss_pred EEEEcChhHHHHHHHHhC
Q psy13951 104 TLMGHGTGAASINFLMLS 121 (130)
Q Consensus 104 ~l~G~SaGg~~a~~~~~~ 121 (130)
.+.|.|+|+-.++.++..
T Consensus 34 ~i~GtSaGAl~aa~~a~~ 51 (246)
T cd07222 34 RFAGASAGSLVAAVLLTA 51 (246)
T ss_pred EEEEECHHHHHHHHHhcC
Confidence 689999999999988753
No 258
>COG4425 Predicted membrane protein [Function unknown]
Probab=50.09 E-value=31 Score=27.26 Aligned_cols=87 Identities=13% Similarity=0.109 Sum_probs=42.5
Q ss_pred EEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCC-CC
Q psy13951 22 VLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGG-DP 100 (130)
Q Consensus 22 vvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~-d~ 100 (130)
+|+---|-||+.... .+.+.+...-+++.|+++|..-+. -..--...+.+.+...+.++-+.....++.- ..
T Consensus 324 vVv~~TGTGWIdp~a--~~t~EyL~~Gd~asVsmQYSyL~S-----wLSllvdpdyg~~aa~aLf~aVy~yw~qLP~~sR 396 (588)
T COG4425 324 VVVTSTGTGWIDPAA--ADTLEYLYNGDVASVSMQYSYLPS-----WLSLLVDPDYGADAARALFEAVYGYWTQLPKSSR 396 (588)
T ss_pred EEEcCCCCCCCCHHH--HhHHHHHhCCceEEEEEehhhHHH-----HHHHhcCCCcchhHHHHHHHHHHHHHHhCCcCCC
Confidence 344445656653221 233335555678999999985321 0000011111222333333333333333322 35
Q ss_pred CCeEEEEcChhHHHH
Q psy13951 101 TSVTLMGHGTGAASI 115 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a 115 (130)
.|+++.|.|.|++-.
T Consensus 397 PKLylhG~SLGa~~s 411 (588)
T COG4425 397 PKLYLHGESLGAMGS 411 (588)
T ss_pred CceEEeccccccccC
Confidence 689999999997543
No 259
>KOG1643|consensus
Probab=50.02 E-value=17 Score=25.48 Aligned_cols=54 Identities=19% Similarity=0.266 Sum_probs=33.7
Q ss_pred CCCCccHHHHHHHHH-HHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHhCCCCCCC
Q psy13951 73 TVTNFGIMDQVAALQ-WIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSPLLSPS 127 (130)
Q Consensus 73 ~~~~~~~~D~~~a~~-~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~~~~~~g~ 127 (130)
...|.+.+++.+.++ |+.++....=.+..|| +.|.|.-|.-+..++-.+.+.|+
T Consensus 174 ~atp~QaqEVh~~iR~wl~~~vs~~Va~~~RI-iYGGSV~g~N~~el~~~~diDGF 228 (247)
T KOG1643|consen 174 TATPEQAQEVHAEIRKWLKSNVSDAVASSTRI-IYGGSVNGGNCKELAKKPDIDGF 228 (247)
T ss_pred CCCHHHHHHHHHHHHHHHhhcchhhhhhceEE-EeccccccccHHHhcccccccce
Confidence 345667778876664 8887665543444566 56666666666666665555553
No 260
>PRK10279 hypothetical protein; Provisional
Probab=49.60 E-value=27 Score=25.68 Aligned_cols=30 Identities=13% Similarity=0.120 Sum_probs=21.0
Q ss_pred HHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 85 ALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 85 a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+++.+.+ .++.++ .+.|.|+|+.+++.++.
T Consensus 23 VL~aL~E----~gi~~d--~i~GtS~GAlvga~yA~ 52 (300)
T PRK10279 23 VINALKK----VGIEID--IVAGCSIGSLVGAAYAC 52 (300)
T ss_pred HHHHHHH----cCCCcC--EEEEEcHHHHHHHHHHc
Confidence 4454544 355553 58999999999988875
No 261
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=49.35 E-value=33 Score=25.65 Aligned_cols=23 Identities=13% Similarity=0.190 Sum_probs=18.0
Q ss_pred CCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 97 GGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 97 ~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
++-|+ .+.|.|+|+.+++.++..
T Consensus 94 gl~p~--~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 94 QLLPR--VIAGSSVGSIVCAIIATR 116 (323)
T ss_pred CCCCC--EEEEECHHHHHHHHHHcC
Confidence 45554 499999999999988763
No 262
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=48.83 E-value=27 Score=26.81 Aligned_cols=25 Identities=24% Similarity=0.244 Sum_probs=19.5
Q ss_pred hhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 95 HFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 95 ~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
+.++-|+ +|.|.|+|+-+++.++..
T Consensus 107 e~gl~p~--~i~GtS~Gaivaa~~a~~ 131 (391)
T cd07229 107 LRGLLPR--IITGTATGALIAALVGVH 131 (391)
T ss_pred HcCCCCc--eEEEecHHHHHHHHHHcC
Confidence 3456665 389999999999999873
No 263
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=48.48 E-value=35 Score=25.21 Aligned_cols=23 Identities=22% Similarity=0.219 Sum_probs=18.0
Q ss_pred CCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 97 GGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 97 ~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
++.++ .+.|.|+|+.+++.++..
T Consensus 95 ~l~~~--~i~GtSaGAi~aa~~~~~ 117 (298)
T cd07206 95 DLLPR--VISGSSAGAIVAALLGTH 117 (298)
T ss_pred CCCCC--EEEEEcHHHHHHHHHHcC
Confidence 44554 499999999999988763
No 264
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=48.33 E-value=28 Score=24.85 Aligned_cols=19 Identities=21% Similarity=0.333 Sum_probs=15.6
Q ss_pred eEEEEcChhHHHHHHHHhC
Q psy13951 103 VTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 103 i~l~G~SaGg~~a~~~~~~ 121 (130)
-.+.|-|||+..++.++..
T Consensus 38 ~~i~G~SAGAl~aa~~a~g 56 (249)
T cd07220 38 RKIYGASAGALTATALVTG 56 (249)
T ss_pred CeEEEEcHHHHHHHHHHcC
Confidence 3478999999999988763
No 265
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=48.07 E-value=16 Score=23.11 Aligned_cols=14 Identities=21% Similarity=0.444 Sum_probs=10.9
Q ss_pred CceEEEEEeCCCcc
Q psy13951 19 RHSVLVIIHGESYS 32 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~ 32 (130)
++-++|++||.-|-
T Consensus 55 ~~klaIfVDGcfWH 68 (117)
T TIGR00632 55 EYRCVIFIHGCFWH 68 (117)
T ss_pred CCCEEEEEcccccc
Confidence 45699999997654
No 266
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=47.71 E-value=29 Score=19.68 Aligned_cols=31 Identities=26% Similarity=0.364 Sum_probs=19.5
Q ss_pred CceEEEEEeCCCcccCCCCcchhHH--HhhcCCeEEEe
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFV--LASYANMVVVT 54 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~--~~~~~g~~vv~ 54 (130)
+.|.++.+|||.= ..-+.++ .+.+.|+.++.
T Consensus 30 ~~~~~~lvhGga~-----~GaD~iA~~wA~~~gv~~~~ 62 (71)
T PF10686_consen 30 RHPDMVLVHGGAP-----KGADRIAARWARERGVPVIR 62 (71)
T ss_pred hCCCEEEEECCCC-----CCHHHHHHHHHHHCCCeeEE
Confidence 4588999999741 1223333 77777876654
No 267
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=47.53 E-value=29 Score=25.32 Aligned_cols=26 Identities=19% Similarity=0.213 Sum_probs=19.3
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.+.++.++ +|.|.|+|+..+..+|..
T Consensus 34 ~e~gi~~~--~iaGtS~GAiva~l~A~g 59 (306)
T COG1752 34 EEAGIPID--VIAGTSAGAIVAALYAAG 59 (306)
T ss_pred HHcCCCcc--EEEecCHHHHHHHHHHcC
Confidence 34444444 589999999999988864
No 268
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=46.80 E-value=19 Score=26.11 Aligned_cols=17 Identities=24% Similarity=0.204 Sum_probs=15.4
Q ss_pred EEEEcChhHHHHHHHHh
Q psy13951 104 TLMGHGTGAASINFLML 120 (130)
Q Consensus 104 ~l~G~SaGg~~a~~~~~ 120 (130)
.+.|.|+||.+++.++.
T Consensus 37 ~i~GTSaGaiia~~la~ 53 (288)
T cd07213 37 LFAGTSAGSLIALGLAL 53 (288)
T ss_pred EEEEeCHHHHHHHHHHc
Confidence 58999999999999876
No 269
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=45.38 E-value=20 Score=26.38 Aligned_cols=17 Identities=24% Similarity=0.214 Sum_probs=15.2
Q ss_pred EEEEcChhHHHHHHHHh
Q psy13951 104 TLMGHGTGAASINFLML 120 (130)
Q Consensus 104 ~l~G~SaGg~~a~~~~~ 120 (130)
.+.|.|+||-++++++.
T Consensus 35 ~i~GTStGgiIA~~la~ 51 (312)
T cd07212 35 WIAGTSTGGILALALLH 51 (312)
T ss_pred EEEeeChHHHHHHHHHc
Confidence 48999999999999885
No 270
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=45.12 E-value=13 Score=26.32 Aligned_cols=14 Identities=29% Similarity=0.612 Sum_probs=12.4
Q ss_pred CCCCeEEEEcChhH
Q psy13951 99 DPTSVTLMGHGTGA 112 (130)
Q Consensus 99 d~~ri~l~G~SaGg 112 (130)
+.+.|+++|||.|.
T Consensus 233 ~i~~I~i~GhSl~~ 246 (270)
T PF14253_consen 233 DIDEIIIYGHSLGE 246 (270)
T ss_pred CCCEEEEEeCCCch
Confidence 56899999999985
No 271
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=44.21 E-value=23 Score=25.11 Aligned_cols=18 Identities=17% Similarity=0.270 Sum_probs=15.7
Q ss_pred EEEEcChhHHHHHHHHhC
Q psy13951 104 TLMGHGTGAASINFLMLS 121 (130)
Q Consensus 104 ~l~G~SaGg~~a~~~~~~ 121 (130)
.+.|.|+|+..++.++..
T Consensus 30 ~i~GtSaGAi~a~~~~~g 47 (266)
T cd07208 30 LVIGVSAGALNAASYLSG 47 (266)
T ss_pred EEEEECHHHHhHHHHHhC
Confidence 589999999999988764
No 272
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=43.97 E-value=23 Score=24.39 Aligned_cols=19 Identities=16% Similarity=0.188 Sum_probs=16.4
Q ss_pred EEEEcChhHHHHHHHHhCC
Q psy13951 104 TLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 104 ~l~G~SaGg~~a~~~~~~~ 122 (130)
.+.|.|+|+-+++.++...
T Consensus 29 ~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 29 IISGTSIGAINGALIAGGD 47 (215)
T ss_pred EEEEECHHHHHHHHHHcCC
Confidence 5899999999999988744
No 273
>PRK15001 SAM-dependent 23S ribosomal RNA mG1835 methyltransferase; Provisional
Probab=43.55 E-value=46 Score=25.41 Aligned_cols=40 Identities=15% Similarity=0.147 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 79 IMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 79 ~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
++-+.+|=+++.++..+...+ .+|.|+++|.|+-.+....
T Consensus 25 l~awdaade~ll~~~~~~~~~-~~~~i~nd~fGal~~~l~~ 64 (378)
T PRK15001 25 LQAWEAADEYLLQQLDDTEIR-GPVLILNDAFGALSCALAE 64 (378)
T ss_pred ccccccHHHHHHHHHhhcccC-CCEEEEcCchhHHHHHHHh
Confidence 444445556677766554333 3899999999987776654
No 274
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=43.15 E-value=66 Score=20.72 Aligned_cols=24 Identities=13% Similarity=0.169 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHhhhhhCCCCCCeEEEEcC
Q psy13951 81 DQVAALQWIKDNIEHFGGDPTSVTLMGHG 109 (130)
Q Consensus 81 D~~~a~~~l~~~~~~~~~d~~ri~l~G~S 109 (130)
+....+.+..... ..+.|+++||+
T Consensus 41 ~~~~sl~~av~~l-----~~~~IiV~gHt 64 (142)
T cd03379 41 DAIRSLVVSVYLL-----GTREIIVIHHT 64 (142)
T ss_pred hHHHHHHHHHHHh-----CCCEEEEEeec
Confidence 6666677665543 35799999997
No 275
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=43.06 E-value=22 Score=25.91 Aligned_cols=16 Identities=38% Similarity=0.378 Sum_probs=14.6
Q ss_pred EEEcChhHHHHHHHHh
Q psy13951 105 LMGHGTGAASINFLML 120 (130)
Q Consensus 105 l~G~SaGg~~a~~~~~ 120 (130)
+.|.|.||-+++.++.
T Consensus 45 i~GTStGgiiA~~la~ 60 (308)
T cd07211 45 ICGVSTGAILAFLLGL 60 (308)
T ss_pred EEecChhHHHHHHHhc
Confidence 8999999999999875
No 276
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=42.98 E-value=54 Score=21.72 Aligned_cols=21 Identities=10% Similarity=0.192 Sum_probs=12.9
Q ss_pred CCCCeEEEEcChhHHHHHHHH
Q psy13951 99 DPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 99 d~~ri~l~G~SaGg~~a~~~~ 119 (130)
+-.+|+++|.|+.|.+-+.++
T Consensus 67 ~gk~I~~yGA~~kg~tlln~~ 87 (160)
T PF08484_consen 67 EGKRIAGYGAGAKGNTLLNYF 87 (160)
T ss_dssp TT--EEEE---SHHHHHHHHH
T ss_pred cCCEEEEECcchHHHHHHHHh
Confidence 457899999999999877665
No 277
>KOG2385|consensus
Probab=42.71 E-value=65 Score=25.98 Aligned_cols=49 Identities=20% Similarity=0.163 Sum_probs=27.8
Q ss_pred CCCCCccHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 72 STVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 72 ~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+.+++..++....+=+-|.+..-.-..-.+.|.|+|+|.|+-.....+.
T Consensus 418 DnpWnia~dRa~kaG~lLAe~L~~r~qG~RPVTLVGFSLGARvIf~CL~ 466 (633)
T KOG2385|consen 418 DNPWNIALDRADKAGELLAEALCKRSQGNRPVTLVGFSLGARVIFECLL 466 (633)
T ss_pred cCchHHHhhHHHHHHHHHHHHHHHhccCCCceeEeeeccchHHHHHHHH
Confidence 3455555555554444343322211112466999999999987775443
No 278
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=41.95 E-value=24 Score=27.10 Aligned_cols=17 Identities=18% Similarity=0.300 Sum_probs=15.3
Q ss_pred EEEEcChhHHHHHHHHh
Q psy13951 104 TLMGHGTGAASINFLML 120 (130)
Q Consensus 104 ~l~G~SaGg~~a~~~~~ 120 (130)
++.|.|+|+.+++.++.
T Consensus 98 iI~GtSAGAivaalla~ 114 (407)
T cd07232 98 VISGTSGGSLVAALLCT 114 (407)
T ss_pred EEEEECHHHHHHHHHHc
Confidence 39999999999998886
No 279
>KOG1551|consensus
Probab=41.75 E-value=19 Score=26.48 Aligned_cols=21 Identities=19% Similarity=0.224 Sum_probs=17.5
Q ss_pred CCCeEEEEcChhHHHHHHHHh
Q psy13951 100 PTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~ 120 (130)
-.+..|.|-|+||.++.++.-
T Consensus 194 ~g~~~~~g~Smgg~~a~~vgS 214 (371)
T KOG1551|consen 194 LGNLNLVGRSMGGDIANQVGS 214 (371)
T ss_pred cccceeeeeecccHHHHhhcc
Confidence 357899999999999987653
No 280
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=41.54 E-value=42 Score=24.26 Aligned_cols=24 Identities=13% Similarity=0.032 Sum_probs=18.0
Q ss_pred hCCCCCCeEEEEcChhHHHHHHHHhC
Q psy13951 96 FGGDPTSVTLMGHGTGAASINFLMLS 121 (130)
Q Consensus 96 ~~~d~~ri~l~G~SaGg~~a~~~~~~ 121 (130)
.++.++ .+.|.|+|+.+++.++..
T Consensus 35 ~gi~~d--~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 35 AGIPID--AIGGTSIGSFVGGLYARE 58 (269)
T ss_pred cCCCcc--EEEEECHHHHHHHHHHcC
Confidence 344443 488999999999988764
No 281
>TIGR02806 clostrip clostripain. Clostripain is a cysteine protease characterized from Clostridium histolyticum, and also known from Clostridium perfringens. It is a heterodimer processed from a single precursor polypeptide, specific for Arg-|-Xaa peptide bonds. The older term alpha-clostripain refers to the most active, most reduced form, rather than to the product of one of several different genes. Clostripain belongs to the peptidase family C11, or clostripain family (see pfam03415).
Probab=41.16 E-value=21 Score=27.95 Aligned_cols=17 Identities=12% Similarity=0.096 Sum_probs=14.0
Q ss_pred CCCceEEEEEeCCCccc
Q psy13951 17 YRRHSVLVIIHGESYSF 33 (130)
Q Consensus 17 ~~~~Pvvv~iHGGg~~~ 33 (130)
..++-+|++-||+||..
T Consensus 112 Ad~Y~LIiwnHG~GW~p 128 (476)
T TIGR02806 112 ADKYMLIMANHGGGAKD 128 (476)
T ss_pred ccceeEEEEeCCCCCcC
Confidence 44677999999999973
No 282
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=40.16 E-value=27 Score=22.70 Aligned_cols=13 Identities=15% Similarity=0.519 Sum_probs=10.2
Q ss_pred CceEEEEEeCCCc
Q psy13951 19 RHSVLVIIHGESY 31 (130)
Q Consensus 19 ~~Pvvv~iHGGg~ 31 (130)
++..+||+||==|
T Consensus 56 ~y~~viFvHGCFW 68 (150)
T COG3727 56 KYRCVIFVHGCFW 68 (150)
T ss_pred CceEEEEEeeeec
Confidence 5679999999544
No 283
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=40.08 E-value=1.6e+02 Score=24.16 Aligned_cols=30 Identities=13% Similarity=0.158 Sum_probs=22.9
Q ss_pred HHHHHHHHHhhhhhCCCCCCeEEEEcChhH
Q psy13951 83 VAALQWIKDNIEHFGGDPTSVTLMGHGTGA 112 (130)
Q Consensus 83 ~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg 112 (130)
....+.+++.+++.|+|.+|+.+.+-+.=.
T Consensus 471 ~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~ 500 (620)
T COG3914 471 AEINARLRDLAEREGVDSERLRFLPPAPNE 500 (620)
T ss_pred HHHHHHHHHHHHHcCCChhheeecCCCCCH
Confidence 355566778888889999999988776544
No 284
>KOG2170|consensus
Probab=39.77 E-value=1e+02 Score=23.21 Aligned_cols=24 Identities=21% Similarity=0.308 Sum_probs=15.0
Q ss_pred CCCC-CCeEEEEcChhHHHHHHHHh
Q psy13951 97 GGDP-TSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 97 ~~d~-~ri~l~G~SaGg~~a~~~~~ 120 (130)
++|- +-|+|.=..+||..+...+.
T Consensus 210 gv~frkaIFIfLSN~gg~eI~~~aL 234 (344)
T KOG2170|consen 210 GVDFRKAIFIFLSNAGGSEIARIAL 234 (344)
T ss_pred cccccceEEEEEcCCcchHHHHHHH
Confidence 4453 44777777778766665554
No 285
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=39.72 E-value=26 Score=24.81 Aligned_cols=18 Identities=28% Similarity=0.246 Sum_probs=15.7
Q ss_pred EEEEcChhHHHHHHHHhC
Q psy13951 104 TLMGHGTGAASINFLMLS 121 (130)
Q Consensus 104 ~l~G~SaGg~~a~~~~~~ 121 (130)
.+.|.|+||-+++.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 388999999999998764
No 286
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=39.64 E-value=63 Score=20.97 Aligned_cols=18 Identities=28% Similarity=0.204 Sum_probs=15.0
Q ss_pred CeEEEEcChhHHHHHHHH
Q psy13951 102 SVTLMGHGTGAASINFLM 119 (130)
Q Consensus 102 ri~l~G~SaGg~~a~~~~ 119 (130)
--.+.|.|+|+.+++.++
T Consensus 29 ~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 29 VTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCEEEEEcHHHHHHHHHh
Confidence 346889999999998876
No 287
>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]
Probab=39.59 E-value=83 Score=26.42 Aligned_cols=39 Identities=26% Similarity=0.491 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhhhhhCCCC-----CCeEEE---------EcChhHHHHHHHH
Q psy13951 81 DQVAALQWIKDNIEHFGGDP-----TSVTLM---------GHGTGAASINFLM 119 (130)
Q Consensus 81 D~~~a~~~l~~~~~~~~~d~-----~ri~l~---------G~SaGg~~a~~~~ 119 (130)
-+..|+.|++.++.++++++ ..|.+- |-|||-.|+..+.
T Consensus 639 Sa~~A~s~vrs~a~~~~i~~~~fek~dIHiHVPeGAtPKDGPSAGitm~TAlv 691 (782)
T COG0466 639 SAQAALSYVRSRAEKLGIDPDFFEKRDIHIHVPEGATPKDGPSAGITMATALV 691 (782)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccccceEEECCCCCCCCCCcchHHHHHHHHH
Confidence 34578999999999999875 446653 9999999988764
No 288
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=39.59 E-value=47 Score=24.63 Aligned_cols=16 Identities=13% Similarity=0.108 Sum_probs=13.7
Q ss_pred EEEEcChhHHHHHHHH
Q psy13951 104 TLMGHGTGAASINFLM 119 (130)
Q Consensus 104 ~l~G~SaGg~~a~~~~ 119 (130)
++.|||.|=..++.++
T Consensus 127 ~~~GHSlGE~aA~~~A 142 (343)
T PLN02752 127 VCAGLSLGEYTALVFA 142 (343)
T ss_pred eeeeccHHHHHHHHHh
Confidence 6899999998888765
No 289
>PF14041 Lipoprotein_21: LppP/LprE lipoprotein
Probab=39.21 E-value=18 Score=21.35 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=21.4
Q ss_pred eEEEEEeCCCcccCCCC-cchhHHHhhcCCeEEEeecccc
Q psy13951 21 SVLVIIHGESYSFGSGN-IYDGFVLASYANMVVVTFNFRL 59 (130)
Q Consensus 21 Pvvv~iHGGg~~~g~~~-~~~~~~~~~~~g~~vv~~~yrl 59 (130)
-.+++||.|-|+.-... .+...... ..+=..|.+.||.
T Consensus 26 ~~vl~Fh~G~fiGt~t~~p~~~~~v~-~~~~~~V~V~Y~~ 64 (89)
T PF14041_consen 26 QQVLFFHDGEFIGTATPDPYGYIDVI-RSTDDTVTVQYRW 64 (89)
T ss_pred eEEEEEECCEEcccCCccccCceeEE-eeCCCEEEEEEEe
Confidence 57888898888644333 22222222 2333477788884
No 290
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=38.91 E-value=23 Score=25.88 Aligned_cols=16 Identities=25% Similarity=0.206 Sum_probs=14.5
Q ss_pred EEEEcChhHHHHHHHH
Q psy13951 104 TLMGHGTGAASINFLM 119 (130)
Q Consensus 104 ~l~G~SaGg~~a~~~~ 119 (130)
.+.|.|.||-+|+.++
T Consensus 45 li~GTStGgiiA~~l~ 60 (309)
T cd07216 45 LIGGTSTGGLIAIMLG 60 (309)
T ss_pred eeeeccHHHHHHHHhc
Confidence 6899999999999886
No 291
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=38.88 E-value=55 Score=23.50 Aligned_cols=24 Identities=13% Similarity=0.152 Sum_probs=17.9
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
.+.++.| -.++|||.|=..++.++
T Consensus 71 ~~~g~~P--~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 71 LALLPRP--SAVAGYSVGEYAAAVVA 94 (295)
T ss_pred HhcCCCC--cEEeecCHHHHHHHHHh
Confidence 4456654 47999999988887765
No 292
>KOG4372|consensus
Probab=38.86 E-value=21 Score=27.46 Aligned_cols=18 Identities=17% Similarity=0.497 Sum_probs=14.6
Q ss_pred CCCeEEEEcChhHHHHHH
Q psy13951 100 PTSVTLMGHGTGAASINF 117 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~ 117 (130)
.++|..+|||.||-.+..
T Consensus 149 i~kISfvghSLGGLvar~ 166 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARY 166 (405)
T ss_pred cceeeeeeeecCCeeeeE
Confidence 479999999999866543
No 293
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=38.26 E-value=73 Score=22.00 Aligned_cols=13 Identities=23% Similarity=0.567 Sum_probs=11.1
Q ss_pred CCceEEEEEeCCC
Q psy13951 18 RRHSVLVIIHGES 30 (130)
Q Consensus 18 ~~~Pvvv~iHGGg 30 (130)
++.|.+++.||-+
T Consensus 47 ~~~p~v~~~h~~~ 59 (299)
T COG1073 47 KKLPAVVFLHGFG 59 (299)
T ss_pred ccCceEEeccCcc
Confidence 6899999999944
No 294
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=37.56 E-value=52 Score=25.24 Aligned_cols=18 Identities=11% Similarity=0.324 Sum_probs=15.4
Q ss_pred EEEEcChhHHHHHHHHhC
Q psy13951 104 TLMGHGTGAASINFLMLS 121 (130)
Q Consensus 104 ~l~G~SaGg~~a~~~~~~ 121 (130)
.+.|.|||+..++.++..
T Consensus 47 ~IaGtSAGALvAAl~asG 64 (382)
T cd07219 47 RVAGTSAGSVIAALVVCG 64 (382)
T ss_pred eEEEEcHHHHHHHHHHhC
Confidence 489999999999988764
No 295
>KOG2853|consensus
Probab=37.48 E-value=1e+02 Score=23.79 Aligned_cols=73 Identities=19% Similarity=0.150 Sum_probs=39.7
Q ss_pred EEEEeCCCcccCCCCcchhHHHhhcCCeEEEeecc----ccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhC
Q psy13951 23 LVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNF----RLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFG 97 (130)
Q Consensus 23 vv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~y----rl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~ 97 (130)
||.|-||+ .|+...++....+.+.|+.|+.++- .-++..-...+..+....|..++=..-+.+++++..+.++
T Consensus 89 VvIIGGG~--~GsS~AfWLKer~rd~gl~VvVVErddtytqssT~lSvGGi~QQFSlpEnIqmSLF~a~Flr~a~ehl~ 165 (509)
T KOG2853|consen 89 VVIIGGGG--SGSSTAFWLKERARDEGLNVVVVERDDTYTQSSTMLSVGGICQQFSLPENIQMSLFTAEFLRNAREHLG 165 (509)
T ss_pred EEEECCCc--cchhhHHHHHHHhhcCCceEEEEeccCcccccceeeeecceeeecccchhhhhhhHHHHHHHHHHHhhc
Confidence 44444443 3444444455577778888888753 3333322222333444555556656667778876555555
No 296
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=37.25 E-value=1.1e+02 Score=21.53 Aligned_cols=12 Identities=17% Similarity=0.318 Sum_probs=8.5
Q ss_pred CCCeEEEEcChh
Q psy13951 100 PTSVTLMGHGTG 111 (130)
Q Consensus 100 ~~ri~l~G~SaG 111 (130)
-+-+.++|.|.|
T Consensus 128 ~KpvaivgaSgg 139 (219)
T TIGR02690 128 GKTLAVMQVSGG 139 (219)
T ss_pred CCcEEEEEeCCc
Confidence 356888998844
No 297
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=37.19 E-value=84 Score=21.13 Aligned_cols=52 Identities=19% Similarity=0.372 Sum_probs=34.0
Q ss_pred HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHH
Q psy13951 44 LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASIN 116 (130)
Q Consensus 44 ~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~ 116 (130)
+....++++++|+|.-+. +. =.+.+++|+... .++ -+.+.+.+.|.|..-..
T Consensus 65 i~~aD~li~~tPeYn~s~---------pg--------~lKnaiD~l~~~--~~~--~Kpv~~~~~s~g~~~~~ 116 (184)
T COG0431 65 IAAADGLIIATPEYNGSY---------PG--------ALKNAIDWLSRE--ALG--GKPVLLLGTSGGGAGGL 116 (184)
T ss_pred HHhCCEEEEECCccCCCC---------CH--------HHHHHHHhCCHh--HhC--CCcEEEEecCCCchhHH
Confidence 455678999999999541 11 455788888765 222 36677777777755444
No 298
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=36.97 E-value=78 Score=19.96 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=27.0
Q ss_pred ccHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChh
Q psy13951 77 FGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTG 111 (130)
Q Consensus 77 ~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaG 111 (130)
.+-.....-+..+++...+.+++|+||-+.--|++
T Consensus 70 ~Gn~~a~~Rv~~~k~~L~~~Gi~~eRv~~~~~~~~ 104 (124)
T PF02662_consen 70 EGNYRAEKRVERLKKLLEELGIEPERVRLYWISAP 104 (124)
T ss_pred hhhHHHHHHHHHHHHHHHHcCCChhHeEEEEeCcc
Confidence 44456677788888888999999999999655544
No 299
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=36.54 E-value=33 Score=25.77 Aligned_cols=17 Identities=24% Similarity=0.288 Sum_probs=15.2
Q ss_pred EEEEcChhHHHHHHHHh
Q psy13951 104 TLMGHGTGAASINFLML 120 (130)
Q Consensus 104 ~l~G~SaGg~~a~~~~~ 120 (130)
.+.|.|.||-+++.++.
T Consensus 44 lIaGTStGgIIAa~la~ 60 (344)
T cd07217 44 FVGGTSTGSIIAACIAL 60 (344)
T ss_pred EEEEecHHHHHHHHHHc
Confidence 58999999999999875
No 300
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=35.80 E-value=60 Score=26.10 Aligned_cols=24 Identities=25% Similarity=0.376 Sum_probs=19.6
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
..+|+.|+ .++|||.|=..++.++
T Consensus 260 ~~~GI~Pd--av~GHSlGE~aAa~aA 283 (538)
T TIGR02816 260 DEFAIKPD--FALGYSKGEASMWASL 283 (538)
T ss_pred HhcCCCCC--EEeecCHHHHHHHHHh
Confidence 36788887 8999999988887765
No 301
>COG1908 FrhD Coenzyme F420-reducing hydrogenase, delta subunit [Energy production and conversion]
Probab=35.12 E-value=93 Score=19.91 Aligned_cols=33 Identities=12% Similarity=0.259 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChh
Q psy13951 79 IMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTG 111 (130)
Q Consensus 79 ~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaG 111 (130)
-.+...-++.+.+.+.+++++++|+-..=.|+.
T Consensus 73 N~ka~rR~~~lke~l~elgie~eRv~~~wiSa~ 105 (132)
T COG1908 73 NYKAKRRMELLKELLKELGIEPERVRVLWISAA 105 (132)
T ss_pred chHHHHHHHHHHHHHHHhCCCcceEEEEEEehh
Confidence 447778888899999999999999988888876
No 302
>PLN02382 probable sucrose-phosphatase
Probab=34.69 E-value=50 Score=25.44 Aligned_cols=27 Identities=19% Similarity=0.384 Sum_probs=21.3
Q ss_pred HHHHHHHHhhhhhCCCCCCeEEEEcCh
Q psy13951 84 AALQWIKDNIEHFGGDPTSVTLMGHGT 110 (130)
Q Consensus 84 ~a~~~l~~~~~~~~~d~~ri~l~G~Sa 110 (130)
.+++++.+.....++++++++.+|+|.
T Consensus 178 ~Al~~L~~~~~~~gi~~~~~iafGDs~ 204 (413)
T PLN02382 178 QALAYLLKKLKAEGKAPVNTLVCGDSG 204 (413)
T ss_pred HHHHHHHHHhhhcCCChhcEEEEeCCH
Confidence 577777776554588999999999985
No 303
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=34.04 E-value=34 Score=25.30 Aligned_cols=17 Identities=18% Similarity=0.278 Sum_probs=14.5
Q ss_pred EEEEcChhHHHHHHHHh
Q psy13951 104 TLMGHGTGAASINFLML 120 (130)
Q Consensus 104 ~l~G~SaGg~~a~~~~~ 120 (130)
.++|.|.||-+++.++.
T Consensus 43 li~GTStGgiia~~l~~ 59 (329)
T cd07215 43 LVAGTSTGGILTCLYLC 59 (329)
T ss_pred eeeccCHHHHHHHHHhC
Confidence 58999999999988753
No 304
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=33.76 E-value=21 Score=23.21 Aligned_cols=14 Identities=21% Similarity=0.453 Sum_probs=11.6
Q ss_pred CeEEEEcChhHHHH
Q psy13951 102 SVTLMGHGTGAASI 115 (130)
Q Consensus 102 ri~l~G~SaGg~~a 115 (130)
-..++|.|||+.+.
T Consensus 69 G~vi~G~SAGA~i~ 82 (154)
T PF03575_consen 69 GGVIIGTSAGAMIL 82 (154)
T ss_dssp TSEEEEETHHHHCT
T ss_pred CCEEEEEChHHhhc
Confidence 37899999999763
No 305
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=33.65 E-value=47 Score=24.83 Aligned_cols=20 Identities=15% Similarity=0.370 Sum_probs=10.9
Q ss_pred HhhhhhCCCCCCeEEEEcCh
Q psy13951 91 DNIEHFGGDPTSVTLMGHGT 110 (130)
Q Consensus 91 ~~~~~~~~d~~ri~l~G~Sa 110 (130)
++..+.|++++||.++|.-+
T Consensus 135 ~~L~~~G~~~~rI~~vG~~~ 154 (346)
T PF02350_consen 135 ERLLQEGEPPERIFVVGNPG 154 (346)
T ss_dssp HHHHHTT--GGGEEE---HH
T ss_pred HHHHhcCCCCCeEEEEChHH
Confidence 44556688899999998644
No 306
>KOG0256|consensus
Probab=33.51 E-value=70 Score=25.00 Aligned_cols=24 Identities=25% Similarity=0.253 Sum_probs=20.8
Q ss_pred CCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 97 GGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 97 ~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
..||+|+++.+.+.+++-+++..+
T Consensus 143 ~fdP~~~Vv~~G~T~ane~l~fcL 166 (471)
T KOG0256|consen 143 KFDPERVVVTNGATSANETLMFCL 166 (471)
T ss_pred ccCccceEEecccchhhHHHHHHh
Confidence 458999999999999998888765
No 307
>PF09757 Arb2: Arb2 domain; InterPro: IPR019154 The fission yeast Argonaute siRNA chaperone (ARC) complex contains the Argonaute protein Ago1 and two previously uncharacterised proteins, Arb1 and Arb2, both of which are required for histone H3 Lys9 (H3-K9) methylation, heterochromatin assembly and siRNA generation []. This entry represents a region found in both Arb2 and the Hda1 protein. ; PDB: 2VQV_A 2VQO_A 2VQJ_A 2VQQ_B 2VQM_A 2VQW_G.
Probab=33.38 E-value=14 Score=24.79 Aligned_cols=41 Identities=22% Similarity=0.185 Sum_probs=0.0
Q ss_pred CCceEEEEEeCCCcccCCCC----------cch-hHHHhhcCCeEEEeeccc
Q psy13951 18 RRHSVLVIIHGESYSFGSGN----------IYD-GFVLASYANMVVVTFNFR 58 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~----------~~~-~~~~~~~~g~~vv~~~yr 58 (130)
....+||+|||.|-...... ... .+..|.++|+.|+.+|-.
T Consensus 97 ~~~~llViih~~g~~wa~~~~~~~~l~~gs~~~~~i~~A~~~~~gVI~~N~~ 148 (178)
T PF09757_consen 97 TAKKLLVIIHGSGVIWARRLIINGGLDSGSQIPQYIKWALKEGYGVIDLNPN 148 (178)
T ss_dssp ----------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45579999999554322211 112 222556677777777654
No 308
>COG3101 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.15 E-value=13 Score=24.48 Aligned_cols=70 Identities=20% Similarity=0.171 Sum_probs=33.5
Q ss_pred CCCceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHH---HHHHHHHHhh
Q psy13951 17 YRRHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQV---AALQWIKDNI 93 (130)
Q Consensus 17 ~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~---~a~~~l~~~~ 93 (130)
.-++-.|+|-|| |.......-..++.+-+.-...+.+.|=..|.|. ......+.+++. +|++|+...+
T Consensus 39 ~vpyhri~FA~G--fYaSalHEIaHWcvAGk~Rr~l~DFGYWY~PDGR-------~a~~Q~~FE~VEvkPQA~eWi~~~a 109 (180)
T COG3101 39 EVPYHRIVFAHG--FYASALHEISHWCIAGKARRELVDFGYWYCPDGR-------DAQTQSQFEDVEVKPQALEWIFCVA 109 (180)
T ss_pred CCCceeEEEech--hHHHHHHHHHHHHHccHHHhhhhccCeeeCCCCc-------cHHHHHHhHhhccchhHHHHHHhhh
Confidence 345668999999 2211111112223333222335566665544332 222223344443 7888887654
Q ss_pred hh
Q psy13951 94 EH 95 (130)
Q Consensus 94 ~~ 95 (130)
..
T Consensus 110 AG 111 (180)
T COG3101 110 AG 111 (180)
T ss_pred cC
Confidence 43
No 309
>PHA01735 hypothetical protein
Probab=32.98 E-value=52 Score=18.73 Aligned_cols=18 Identities=33% Similarity=0.462 Sum_probs=14.2
Q ss_pred CCccHHHHHHHHHHHHHh
Q psy13951 75 TNFGIMDQVAALQWIKDN 92 (130)
Q Consensus 75 ~~~~~~D~~~a~~~l~~~ 92 (130)
....-.|..+|.+|+++|
T Consensus 28 geATtaDL~AA~d~Lk~N 45 (76)
T PHA01735 28 GEATTADLRAACDWLKSN 45 (76)
T ss_pred CcccHHHHHHHHHHHHHC
Confidence 344566999999999976
No 310
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5. PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.
Probab=32.97 E-value=80 Score=24.42 Aligned_cols=20 Identities=15% Similarity=0.240 Sum_probs=16.5
Q ss_pred eEEEEcChhHHHHHHHHhCC
Q psy13951 103 VTLMGHGTGAASINFLMLSP 122 (130)
Q Consensus 103 i~l~G~SaGg~~a~~~~~~~ 122 (130)
-.+.|.|+|+-.++.++...
T Consensus 43 ~~iaGaSAGAL~aa~~a~g~ 62 (405)
T cd07223 43 RRIYGSSSGALNAVSIVCGK 62 (405)
T ss_pred CeeeeeCHHHHHHHHHHhCC
Confidence 45899999999999888643
No 311
>COG1189 Predicted rRNA methylase [Translation, ribosomal structure and biogenesis]
Probab=32.83 E-value=62 Score=23.20 Aligned_cols=30 Identities=30% Similarity=0.448 Sum_probs=20.6
Q ss_pred HHHhhhhhCCCC-CCeEE-EEcChhHHHHHHH
Q psy13951 89 IKDNIEHFGGDP-TSVTL-MGHGTGAASINFL 118 (130)
Q Consensus 89 l~~~~~~~~~d~-~ri~l-~G~SaGg~~a~~~ 118 (130)
|.+..+.|.+|. +++++ .|.|.||+.=+++
T Consensus 67 L~~ale~F~l~~k~kv~LDiGsSTGGFTd~lL 98 (245)
T COG1189 67 LEKALEEFELDVKGKVVLDIGSSTGGFTDVLL 98 (245)
T ss_pred HHHHHHhcCcCCCCCEEEEecCCCccHHHHHH
Confidence 444556677764 45666 6999999887655
No 312
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=32.58 E-value=83 Score=19.79 Aligned_cols=22 Identities=18% Similarity=0.422 Sum_probs=16.7
Q ss_pred hhhCCCCCCeEEEEcChhHHHH
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASI 115 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a 115 (130)
.+++++|+++.++|+|.....+
T Consensus 144 ~~~~~~p~~~~~vgD~~~d~~~ 165 (176)
T PF13419_consen 144 EKLGIPPEEILFVGDSPSDVEA 165 (176)
T ss_dssp HHHTSSGGGEEEEESSHHHHHH
T ss_pred HHcCCCcceEEEEeCCHHHHHH
Confidence 4457899999999999944333
No 313
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=32.05 E-value=59 Score=24.96 Aligned_cols=23 Identities=13% Similarity=0.143 Sum_probs=18.0
Q ss_pred HHhhhhhCCCCCCeEEEEcChhH
Q psy13951 90 KDNIEHFGGDPTSVTLMGHGTGA 112 (130)
Q Consensus 90 ~~~~~~~~~d~~ri~l~G~SaGg 112 (130)
+++..+.|.++++|++.|.++==
T Consensus 157 r~nLl~EG~~~~~IfvtGnt~iD 179 (383)
T COG0381 157 RKNLLREGVPEKRIFVTGNTVID 179 (383)
T ss_pred HHHHHHcCCCccceEEeCChHHH
Confidence 45666678899999999988743
No 314
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=30.83 E-value=97 Score=19.29 Aligned_cols=30 Identities=20% Similarity=0.335 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHH
Q psy13951 81 DQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASI 115 (130)
Q Consensus 81 D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a 115 (130)
++..+++|..... ..+.|+++|||--|.+.
T Consensus 44 ~~~~sl~~av~~l-----~v~~ivV~gHt~CG~v~ 73 (119)
T cd00382 44 DVLASLEYAVEVL-----GVKHIIVCGHTDCGAVK 73 (119)
T ss_pred cHHHHHHHHHHhh-----CCCEEEEEccCCCcHHH
Confidence 5667777776544 35799999997555443
No 315
>cd07036 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins. Thiamine pyrophosphate (TPP) family, pyrimidine (PYR) binding domain of the beta subunits of the E1 components of: human pyruvate dehydrogenase complex (E1- PDHc), the acetoin dehydrogenase complex (ADC), and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC), subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. The PYR and PP domain
Probab=30.51 E-value=1.7e+02 Score=19.48 Aligned_cols=38 Identities=11% Similarity=-0.012 Sum_probs=20.6
Q ss_pred CCceEEEEEeCCCcccCCCCcchh--HH-HhhcCCeEEEeec
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIYDG--FV-LASYANMVVVTFN 56 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~~~--~~-~~~~~g~~vv~~~ 56 (130)
.+.||++..++||...+... +.. .. +..--|+.|+.|.
T Consensus 102 ~~~pv~i~~~~gg~~~~G~t-hs~~~~a~lr~iPg~~V~~Ps 142 (167)
T cd07036 102 FKVPIVIRGPNGGGIGGGAQ-HSQSLEAWFAHIPGLKVVAPS 142 (167)
T ss_pred ccCCEEEEEeCCCCCCcChh-hhhhHHHHHhcCCCCEEEeeC
Confidence 46788888877774422222 211 12 3333477777764
No 316
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=30.15 E-value=45 Score=27.90 Aligned_cols=17 Identities=18% Similarity=0.286 Sum_probs=15.1
Q ss_pred EEEEcChhHHHHHHHHh
Q psy13951 104 TLMGHGTGAASINFLML 120 (130)
Q Consensus 104 ~l~G~SaGg~~a~~~~~ 120 (130)
+|.|.|+||..++.+|.
T Consensus 69 ~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 69 VISGTSAGGINGVLLAY 85 (739)
T ss_pred eEEeeCHHHHHHHHHHc
Confidence 48999999999998886
No 317
>KOG1283|consensus
Probab=30.01 E-value=2.5e+02 Score=21.44 Aligned_cols=21 Identities=10% Similarity=0.128 Sum_probs=18.2
Q ss_pred CCCeEEEEcChhHHHHHHHHh
Q psy13951 100 PTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~~~ 120 (130)
...++|+=.|.||-|+.-++.
T Consensus 121 t~P~~If~ESYGGKma~k~al 141 (414)
T KOG1283|consen 121 TVPLYIFCESYGGKMAAKFAL 141 (414)
T ss_pred ccceEEEEhhcccchhhhhhh
Confidence 467999999999999988775
No 318
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=29.39 E-value=56 Score=23.33 Aligned_cols=18 Identities=17% Similarity=0.279 Sum_probs=15.4
Q ss_pred EEEEcChhHHHHHHHHhC
Q psy13951 104 TLMGHGTGAASINFLMLS 121 (130)
Q Consensus 104 ~l~G~SaGg~~a~~~~~~ 121 (130)
.+.|.|+|+..++.++..
T Consensus 35 ~i~GtSAGAl~aa~~asg 52 (252)
T cd07221 35 MFFGASAGALHCVTFLSG 52 (252)
T ss_pred EEEEEcHHHHHHHHHHhC
Confidence 589999999999888753
No 319
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=29.03 E-value=1.9e+02 Score=19.61 Aligned_cols=36 Identities=17% Similarity=0.119 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 80 MDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 80 ~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
+.+.++.+++.+...+ ..||.++|....+.++..++
T Consensus 28 ~~i~~a~~~i~~al~~----~~rI~i~G~G~S~~~A~~~a 63 (192)
T PRK00414 28 HAIQRAAVLIADSFKA----GGKVLSCGNGGSHCDAMHFA 63 (192)
T ss_pred HHHHHHHHHHHHHHHC----CCEEEEEeCcHHHHHHHHHH
Confidence 3555677777665543 58999999988888777776
No 320
>PLN02200 adenylate kinase family protein
Probab=28.62 E-value=1e+02 Score=21.61 Aligned_cols=39 Identities=13% Similarity=0.113 Sum_probs=25.0
Q ss_pred CCCCCCceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEee
Q psy13951 14 SRTYRRHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTF 55 (130)
Q Consensus 14 ~~~~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~ 55 (130)
.....+.|.+|++.|. -|+........++...|+..++.
T Consensus 36 ~~~~~~~~~ii~I~G~---PGSGKsT~a~~La~~~g~~his~ 74 (234)
T PLN02200 36 SSSKEKTPFITFVLGG---PGSGKGTQCEKIVETFGFKHLSA 74 (234)
T ss_pred CCccCCCCEEEEEECC---CCCCHHHHHHHHHHHhCCeEEEc
Confidence 3444567899999994 34444333333777778877766
No 321
>KOG0258|consensus
Probab=28.33 E-value=98 Score=24.13 Aligned_cols=39 Identities=21% Similarity=0.287 Sum_probs=26.7
Q ss_pred HHHHHhhhhhCCCCCCeEEE-EcChhHHHHHHHHhCCCCCC
Q psy13951 87 QWIKDNIEHFGGDPTSVTLM-GHGTGAASINFLMLSPLLSP 126 (130)
Q Consensus 87 ~~l~~~~~~~~~d~~ri~l~-G~SaGg~~a~~~~~~~~~~g 126 (130)
+++.+.-. ...||++|+|. |.|.+..+.+.+.......|
T Consensus 124 ~~I~rRDG-~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~G 163 (475)
T KOG0258|consen 124 EFIERRDG-IPADPEDIFLTTGASPAIRSILSLLIAGKKTG 163 (475)
T ss_pred HHHHhccC-CCCCHHHeeecCCCcHHHHHHHHHHhcCCCCc
Confidence 34443323 56799999996 88999888888876543333
No 322
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=28.04 E-value=91 Score=20.86 Aligned_cols=26 Identities=8% Similarity=0.104 Sum_probs=19.6
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
.+++++++++.++|+|.....++.-+
T Consensus 142 ~~~~~~~~~~l~igD~~~Di~aA~~~ 167 (205)
T TIGR01454 142 RLLDVPPEDAVMVGDAVTDLASARAA 167 (205)
T ss_pred HHcCCChhheEEEcCCHHHHHHHHHc
Confidence 45678899999999998665555443
No 323
>PLN03006 carbonate dehydratase
Probab=27.93 E-value=75 Score=23.55 Aligned_cols=33 Identities=15% Similarity=0.321 Sum_probs=23.6
Q ss_pred HHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 82 QVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 82 ~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
+..+++|...+.. .+.|+|+|||.=|.+.+.+.
T Consensus 158 ~~aSLEYAV~~L~-----V~~IVV~GHs~CGaV~Aal~ 190 (301)
T PLN03006 158 TKAALEFSVNTLN-----VENILVIGHSRCGGIQALMK 190 (301)
T ss_pred hhhhHHHHHHHhC-----CCEEEEecCCCchHHHHHhh
Confidence 5677887776553 58999999997666665443
No 324
>COG5039 Exopolysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=27.90 E-value=57 Score=24.35 Aligned_cols=11 Identities=9% Similarity=0.226 Sum_probs=9.0
Q ss_pred EEEEEeCCCcc
Q psy13951 22 VLVIIHGESYS 32 (130)
Q Consensus 22 vvv~iHGGg~~ 32 (130)
.+|++||||=.
T Consensus 88 ~~i~~~GGGNl 98 (339)
T COG5039 88 DIIFFTGGGNL 98 (339)
T ss_pred ceEEEeCCCch
Confidence 69999998854
No 325
>cd08757 SAM_PNT_ESE Sterile alpha motif (SAM)/Pointed domain of ESE-like ETS transcriptional regulators. SAM Pointed domain of ESE-like (Epithelium-Specific ETS) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It can act as a major transactivator by providing a potential docking site for co-activators. ETS factors are important for cell differentiation. They can be involved in regulation of gene expression in different types of epithelial cells. They are expressed in salivary gland, intestine, stomach, pancreas, lungs, kidneys, colon, mammary gland, and prostate. Members of this group are proto-oncogenes. Expression profiles of these factors are altered in epithelial cancers, which makes them potential targets for cancer therapy.
Probab=27.60 E-value=1e+02 Score=17.26 Aligned_cols=36 Identities=11% Similarity=0.211 Sum_probs=24.2
Q ss_pred HHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHH
Q psy13951 83 VAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFL 118 (130)
Q Consensus 83 ~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~ 118 (130)
.++.+|+.....+++.+...|-+.-+.+-|..-+.+
T Consensus 8 ~~V~~Wl~w~~~e~~l~~~~i~~~~F~m~Gk~LC~m 43 (68)
T cd08757 8 NDVLEWLQFVAEQNKLDAECISFQKFNIDGQTLCSM 43 (68)
T ss_pred HHHHHHHHHHHHHcCCCCCcCCccccCCCHHHHHcC
Confidence 456777777777778887767666666666554443
No 326
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=27.56 E-value=81 Score=21.10 Aligned_cols=26 Identities=15% Similarity=0.220 Sum_probs=20.8
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
..++++++++.++|+|..+..++..+
T Consensus 152 ~~~~~~~~~~~~igDs~~d~~aa~~a 177 (213)
T TIGR01449 152 ERLGVAPQQMVYVGDSRVDIQAARAA 177 (213)
T ss_pred HHcCCChhHeEEeCCCHHHHHHHHHC
Confidence 45677899999999999887776654
No 327
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=27.55 E-value=53 Score=21.56 Aligned_cols=20 Identities=20% Similarity=0.371 Sum_probs=15.4
Q ss_pred HHHHhhhhhCCCCCCeEEEE
Q psy13951 88 WIKDNIEHFGGDPTSVTLMG 107 (130)
Q Consensus 88 ~l~~~~~~~~~d~~ri~l~G 107 (130)
.+++...+.|++++||.+.|
T Consensus 147 ~~~~~l~~~Gi~~~~I~vtG 166 (169)
T PF06925_consen 147 EVKEELIERGIPPERIHVTG 166 (169)
T ss_pred HHHHHHHHcCCChhHEEEeC
Confidence 34555566899999999988
No 328
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=27.29 E-value=81 Score=21.29 Aligned_cols=33 Identities=18% Similarity=0.243 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHH
Q psy13951 81 DQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFL 118 (130)
Q Consensus 81 D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~ 118 (130)
+...+++|...... .+.|+|+|||-=|.+.+.+
T Consensus 66 ~~~asleyAv~~L~-----v~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 66 NCLSVLQYAVDVLK-----VKHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred chhhhHHHHHHhcC-----CCEEEEecCCCchHHHHHH
Confidence 46677887766543 5799999999766655544
No 329
>cd03015 PRX_Typ2cys Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. The functional unit of typical 2-cys PRX is a homodimer. A unique intermolecular redox-active disulfide center is utilized for its activity. Upon reaction with peroxides, its peroxidatic cysteine is oxidized into a sulfenic acid intermediate which is resolved by bonding with the resolving cysteine from the other subunit of the homodimer. This intermolecular disulfide bond is then reduced by thioredoxin, tryparedoxin or AhpF. Typical 2-cys PRXs, like 1-cys PRXs, form decamers which are stabilized by reduction of the active site cysteine. Typical 2-cys PRX interacts through beta strands at one edge of the monomer (B-type interface) to form the functional homodimer, and uses an A-type interface (similar to the dimeric
Probab=27.09 E-value=1e+02 Score=20.17 Aligned_cols=38 Identities=13% Similarity=0.053 Sum_probs=23.0
Q ss_pred CceEEEEEeCCCcccCCCCcchhHH----HhhcCCeEEEeec
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFV----LASYANMVVVTFN 56 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~----~~~~~g~~vv~~~ 56 (130)
..++||+++.+.|+..-......+. -....|+.++.+.
T Consensus 29 Gk~vvl~F~~~~~c~~C~~~l~~l~~~~~~~~~~~v~vv~Is 70 (173)
T cd03015 29 GKWVVLFFYPLDFTFVCPTEIIAFSDRYEEFKKLNAEVLGVS 70 (173)
T ss_pred CCEEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 4589999998888765444222222 2234577777764
No 330
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=26.99 E-value=2.6e+02 Score=20.56 Aligned_cols=35 Identities=20% Similarity=0.332 Sum_probs=20.4
Q ss_pred ceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeecccc
Q psy13951 20 HSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRL 59 (130)
Q Consensus 20 ~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yrl 59 (130)
.|=+|++||-- .........+...|+.++.++.++
T Consensus 86 ~pDiv~~~gd~-----~~~la~a~aa~~~~ipv~h~~~g~ 120 (365)
T TIGR00236 86 KPDIVLVQGDT-----TTTLAGALAAFYLQIPVGHVEAGL 120 (365)
T ss_pred CCCEEEEeCCc-----hHHHHHHHHHHHhCCCEEEEeCCC
Confidence 47899999810 111112225566788888776654
No 331
>PF03415 Peptidase_C11: Clostripain family This family belongs to family C11 of the peptidase classification.; InterPro: IPR005077 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to the MEROPS peptidase family C11 (clostripain family, clan CD). ; PDB: 3UWS_A.
Probab=26.98 E-value=24 Score=27.04 Aligned_cols=15 Identities=20% Similarity=0.390 Sum_probs=10.6
Q ss_pred CCCceEEEEEeCCCc
Q psy13951 17 YRRHSVLVIIHGESY 31 (130)
Q Consensus 17 ~~~~Pvvv~iHGGg~ 31 (130)
.+++-+|++=||+||
T Consensus 96 A~~y~LIlw~HG~Gw 110 (397)
T PF03415_consen 96 ADRYGLILWDHGGGW 110 (397)
T ss_dssp ECEEEEEEES-B-TT
T ss_pred cccEEEEEEECCCCC
Confidence 345679999999999
No 332
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=26.85 E-value=81 Score=20.22 Aligned_cols=12 Identities=25% Similarity=0.573 Sum_probs=9.9
Q ss_pred CCCceEEEEEeC
Q psy13951 17 YRRHSVLVIIHG 28 (130)
Q Consensus 17 ~~~~Pvvv~iHG 28 (130)
..+.|+|+-+||
T Consensus 49 ~p~KpLVlSfHG 60 (127)
T PF06309_consen 49 NPRKPLVLSFHG 60 (127)
T ss_pred CCCCCEEEEeec
Confidence 345699999999
No 333
>PF06344 Parecho_VpG: Parechovirus Genome-linked protein; InterPro: IPR009407 The viral polyprotein of parechoviruses contains: coat protein VP0 (P1AB); coat protein VP3 (P1C); coat protein VP1 (P1D); picornain 2A (3.4.22.29 from EC, core protein P2A); core protein P2B; core protein P2C; core protein P3A; genome-linked protein VPg (P3B); picornain 3C (3.4.22.28 from EC, MEROPS peptidase subfamily 3CF: parechovirus picornain 3C (P3C)) []. This entry consists of the genome-linked protein Vpg type P3B.; GO: 0019015 viral genome
Probab=26.59 E-value=49 Score=13.69 Aligned_cols=7 Identities=43% Similarity=1.122 Sum_probs=4.0
Q ss_pred CCCCCCC
Q psy13951 1 FQPNLPE 7 (130)
Q Consensus 1 y~p~~p~ 7 (130)
|.|.+|.
T Consensus 3 ynptlp~ 9 (20)
T PF06344_consen 3 YNPTLPV 9 (20)
T ss_pred cCccccc
Confidence 5566654
No 334
>PRK15412 thiol:disulfide interchange protein DsbE; Provisional
Probab=26.58 E-value=86 Score=20.94 Aligned_cols=40 Identities=15% Similarity=0.155 Sum_probs=24.5
Q ss_pred CCceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccc
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFR 58 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yr 58 (130)
+..|+||++. ..|+..-......+.-..+.|+.++.+++.
T Consensus 67 ~gk~vvv~Fw-atwC~~C~~e~p~l~~l~~~~~~vi~v~~~ 106 (185)
T PRK15412 67 QGKPVLLNVW-ATWCPTCRAEHQYLNQLSAQGIRVVGMNYK 106 (185)
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHcCCEEEEEECC
Confidence 4568999988 466654443333333223458888888864
No 335
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=25.84 E-value=86 Score=22.91 Aligned_cols=18 Identities=22% Similarity=0.542 Sum_probs=15.1
Q ss_pred CCCCCeEEEEcChhHHHH
Q psy13951 98 GDPTSVTLMGHGTGAASI 115 (130)
Q Consensus 98 ~d~~ri~l~G~SaGg~~a 115 (130)
.++++++++|+|+++--+
T Consensus 209 ~~~~~vI~vGDs~~Dl~m 226 (277)
T TIGR01544 209 KDRSNIILLGDSQGDLRM 226 (277)
T ss_pred CCcceEEEECcChhhhhH
Confidence 578999999999997544
No 336
>KOG2214|consensus
Probab=25.77 E-value=35 Score=27.17 Aligned_cols=17 Identities=18% Similarity=0.346 Sum_probs=15.1
Q ss_pred EEEEcChhHHHHHHHHh
Q psy13951 104 TLMGHGTGAASINFLML 120 (130)
Q Consensus 104 ~l~G~SaGg~~a~~~~~ 120 (130)
+|.|.|+||-+|+.++.
T Consensus 205 IIsGsS~GaivAsl~~v 221 (543)
T KOG2214|consen 205 IISGSSAGAIVASLVGV 221 (543)
T ss_pred hhcCCchhHHHHHHHhh
Confidence 48999999999998876
No 337
>cd02958 UAS UAS family; UAS is a domain of unknown function. Most members of this family are uncharacterized proteins with similarity to FAS-associated factor 1 (FAF1) and ETEA because of the presence of a UAS domain N-terminal to a ubiquitin-associated UBX domain. FAF1 is a longer protein, compared to the other members of this family, having additional N-terminal domains, a ubiquitin-associated UBA domain and a nuclear targeting domain. FAF1 is an apoptotic signaling molecule that acts downstream in the Fas signal transduction pathway. It interacts with the cytoplasmic domain of Fas, but not to a Fas mutant that is deficient in signal transduction. ETEA is the protein product of a highly expressed gene in T-cells and eosinophils of atopic dermatitis patients. The presence of the ubiquitin-associated UBX domain in the proteins of this family suggests the possibility of their involvement in ubiquitination. Recently, FAF1 has been shown to interact with valosin-containing protein (VCP),
Probab=25.66 E-value=49 Score=20.04 Aligned_cols=12 Identities=25% Similarity=0.470 Sum_probs=10.0
Q ss_pred CCceEEEEEeCC
Q psy13951 18 RRHSVLVIIHGE 29 (130)
Q Consensus 18 ~~~Pvvv~iHGG 29 (130)
+++|++|++|+-
T Consensus 16 ~~K~llv~~~~~ 27 (114)
T cd02958 16 EKKWLLVYLQSE 27 (114)
T ss_pred hCceEEEEEecC
Confidence 467999999993
No 338
>PF06658 DUF1168: Protein of unknown function (DUF1168); InterPro: IPR009548 This family consists of several hypothetical eukaryotic proteins of unknown function.
Probab=25.35 E-value=16 Score=23.86 Aligned_cols=12 Identities=33% Similarity=0.443 Sum_probs=9.0
Q ss_pred EEEEcChhHHHH
Q psy13951 104 TLMGHGTGAASI 115 (130)
Q Consensus 104 ~l~G~SaGg~~a 115 (130)
.|+|.|||++.-
T Consensus 25 NV~GSSAGAGSG 36 (142)
T PF06658_consen 25 NVQGSSAGAGSG 36 (142)
T ss_pred cccccccccCcc
Confidence 378999998643
No 339
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=25.26 E-value=95 Score=20.44 Aligned_cols=26 Identities=8% Similarity=0.083 Sum_probs=20.4
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
.++++++++++.+|+|....-++..+
T Consensus 157 ~~~~~~~~~~i~iGDs~~D~~~a~~a 182 (201)
T TIGR01491 157 RELNPSLTETVAVGDSKNDLPMFEVA 182 (201)
T ss_pred HHhCCCHHHEEEEcCCHhHHHHHHhc
Confidence 45677899999999999876666554
No 340
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=25.07 E-value=1.6e+02 Score=18.44 Aligned_cols=23 Identities=22% Similarity=0.206 Sum_probs=17.2
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHH
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINF 117 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~ 117 (130)
.++++++ ++.++|+|.....++.
T Consensus 129 ~~~~~~~-~~l~iGDs~~Di~aa~ 151 (154)
T TIGR01549 129 ESLGLPP-EVLHVGDNLNDIEGAR 151 (154)
T ss_pred HHcCCCC-CEEEEeCCHHHHHHHH
Confidence 4456788 9999999987665543
No 341
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=24.43 E-value=80 Score=20.36 Aligned_cols=23 Identities=9% Similarity=0.040 Sum_probs=17.5
Q ss_pred hhhCCCCCCeEEEEcChhHHHHH
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASIN 116 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~ 116 (130)
.+.++++++++.+|+|..-.-++
T Consensus 152 ~~~~~~~~~~~~iGDs~~D~~~~ 174 (177)
T TIGR01488 152 EESKITLKKIIAVGDSVNDLPML 174 (177)
T ss_pred HHhCCCHHHEEEEeCCHHHHHHH
Confidence 34467888999999999875544
No 342
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=24.35 E-value=1.3e+02 Score=19.72 Aligned_cols=26 Identities=12% Similarity=0.098 Sum_probs=19.7
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
..+++++++++++|+|.....++.-+
T Consensus 114 ~~l~~~~~~~~~VgDs~~Di~~A~~a 139 (181)
T PRK08942 114 ERLNIDLAGSPMVGDSLRDLQAAAAA 139 (181)
T ss_pred HHcCCChhhEEEEeCCHHHHHHHHHC
Confidence 34567899999999998776665543
No 343
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=24.07 E-value=1.6e+02 Score=18.93 Aligned_cols=24 Identities=8% Similarity=0.189 Sum_probs=18.1
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHH
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINF 117 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~ 117 (130)
.+++++++++.++|+|.-+..++.
T Consensus 151 ~~~~~~~~~~~~vgD~~~di~aA~ 174 (183)
T TIGR01509 151 KKLGLKPEECLFVDDSPAGIEAAK 174 (183)
T ss_pred HHcCCCcceEEEEcCCHHHHHHHH
Confidence 445778999999999997654443
No 344
>KOG4153|consensus
Probab=24.00 E-value=1.8e+02 Score=21.41 Aligned_cols=35 Identities=23% Similarity=0.316 Sum_probs=20.4
Q ss_pred CCCceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeec
Q psy13951 17 YRRHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFN 56 (130)
Q Consensus 17 ~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~ 56 (130)
..+.||.+.+|||.- + ..+.+--+-+.|++-+.+|
T Consensus 254 ~~~KpvFlVfHGgSG---s--svnefktgIenGVvKvNvd 288 (358)
T KOG4153|consen 254 KSKKPVFLVFHGGSG---S--SVNEFKTGIENGVVKVNVD 288 (358)
T ss_pred cccCceEEEEeCCCC---c--cHHHHHHHHhcCeEEEeec
Confidence 456799999999642 2 2233333344565555554
No 345
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=23.90 E-value=1.3e+02 Score=19.69 Aligned_cols=26 Identities=8% Similarity=0.042 Sum_probs=19.8
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
.+++++++++.++|+|.-...++..+
T Consensus 117 ~~~~~~~~~~v~VGDs~~Di~aA~~a 142 (176)
T TIGR00213 117 KELHIDMAQSYMVGDKLEDMQAGVAA 142 (176)
T ss_pred HHcCcChhhEEEEcCCHHHHHHHHHC
Confidence 45678999999999998766655443
No 346
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=23.87 E-value=1.4e+02 Score=22.19 Aligned_cols=31 Identities=26% Similarity=0.218 Sum_probs=21.1
Q ss_pred HHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 84 AALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 84 ~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+|+...++.+.+ .=.++|-|.|+++++.+-+
T Consensus 246 ~A~~~~r~La~~------eGilvG~SsGA~~~aa~~~ 276 (300)
T COG0031 246 EAIATARRLARE------EGLLVGISSGAALAAALKL 276 (300)
T ss_pred HHHHHHHHHHHH------hCeeecccHHHHHHHHHHH
Confidence 455555555544 3348999999999887644
No 347
>cd01459 vWA_copine_like VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. Phylogenetic distribution suggests that copines have been lost in some eukaryotes. No functional properties have been assigned to the VWA domains present in copines. The members of this subgroup contain a functional MIDAS motif based on their preferential binding to magnesium and manganese. However, the MIDAS motif is not totally conserved, in most cases the MIDAS consists of the sequence DxTxS instead of the motif DxSxS that is found in most cases. The C2 domains present in copines mediate phospholipid binding.
Probab=23.79 E-value=2.8e+02 Score=19.93 Aligned_cols=58 Identities=12% Similarity=0.254 Sum_probs=32.1
Q ss_pred EEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcCh
Q psy13951 51 VVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGT 110 (130)
Q Consensus 51 ~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~Sa 110 (130)
.++++||.-+ -+.......-+...+....+..+|++-+-+.+..|.-| .++-++|+.+
T Consensus 34 l~vaIDfT~S-Ng~p~~~~SLHy~~~~~~N~Yq~aI~~vg~il~~yD~D-~~ip~~GFGa 91 (254)
T cd01459 34 LIVAIDFTKS-NGWPGEKRSLHYISPGRLNPYQKAIRIVGEVLQPYDSD-KLIPAFGFGA 91 (254)
T ss_pred EEEEEEeCCC-CCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHhcCCC-CceeeEeecc
Confidence 4778888843 22111111111112333456666666666666666655 6888999877
No 348
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=23.65 E-value=62 Score=22.91 Aligned_cols=17 Identities=18% Similarity=0.272 Sum_probs=13.5
Q ss_pred CCeEEEEcChhHHHHHH
Q psy13951 101 TSVTLMGHGTGAASINF 117 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~ 117 (130)
+...++|.|||+.++..
T Consensus 112 ~G~~~~G~SAGAii~~~ 128 (233)
T PRK05282 112 NGTPYIGWSAGANVAGP 128 (233)
T ss_pred CCCEEEEECHHHHhhhc
Confidence 34789999999987554
No 349
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=23.06 E-value=70 Score=23.35 Aligned_cols=24 Identities=21% Similarity=0.425 Sum_probs=17.1
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
..+|+.|+ +++|||.|=..|+.++
T Consensus 79 ~~~Gi~P~--~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 79 RSWGIKPD--AVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHTTHCES--EEEESTTHHHHHHHHT
T ss_pred cccccccc--eeeccchhhHHHHHHC
Confidence 44565554 5789999988877664
No 350
>PF00237 Ribosomal_L22: Ribosomal protein L22p/L17e; InterPro: IPR001063 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. Ribosomal protein L22 is one of the proteins from the large ribosomal subunit. In Escherichia coli, L22 is known to bind 23S rRNA. It belongs to a family of ribosomal proteins which includes: bacterial L22; algal and plant chloroplast L22 (in legumes L22 is encoded in the nucleus instead of the chloroplast); cyanelle L22; archaebacterial L22; mammalian L17; plant L17 and yeast YL17.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 3CD6_R 1Q7Y_S 1VQ6_R 1YI2_R 1QVF_Q 3CCR_R 3CCU_R 3CCL_R 1YJ9_R 3CCQ_R ....
Probab=22.91 E-value=1.6e+02 Score=17.83 Aligned_cols=27 Identities=22% Similarity=0.165 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHhhh-hhCCCCCCeEEEE
Q psy13951 81 DQVAALQWIKDNIE-HFGGDPTSVTLMG 107 (130)
Q Consensus 81 D~~~a~~~l~~~~~-~~~~d~~ri~l~G 107 (130)
.+...++-...++. ..+.|+++++|.-
T Consensus 42 ~i~k~L~~a~~nA~~~~g~d~~~L~I~~ 69 (105)
T PF00237_consen 42 FILKLLKSAIANAENNKGLDPDNLYISE 69 (105)
T ss_dssp HHHHHHHHHHHHHHHHCTSTCGGEEEEE
T ss_pred HHHhhHHHHHhhcccccccccCceEEEE
Confidence 34455555566676 7889999998853
No 351
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=22.91 E-value=1e+02 Score=20.74 Aligned_cols=26 Identities=15% Similarity=0.224 Sum_probs=20.1
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
.+++.+++++.++|+|..+..++..+
T Consensus 149 ~~~~~~~~~~~~iGDs~~Di~aa~~a 174 (214)
T PRK13288 149 ELLGAKPEEALMVGDNHHDILAGKNA 174 (214)
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 34567899999999999777666554
No 352
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=22.91 E-value=1.1e+02 Score=21.34 Aligned_cols=26 Identities=4% Similarity=-0.022 Sum_probs=20.9
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
.+++.+++++.++|+|.-+..++..+
T Consensus 175 ~~~~~~~~~~l~vgDs~~Di~aA~~a 200 (248)
T PLN02770 175 EVLKVSKDHTFVFEDSVSGIKAGVAA 200 (248)
T ss_pred HHhCCChhHEEEEcCCHHHHHHHHHC
Confidence 45677899999999999887777654
No 353
>KOG4530|consensus
Probab=22.80 E-value=2.5e+02 Score=19.01 Aligned_cols=50 Identities=22% Similarity=0.505 Sum_probs=33.1
Q ss_pred HhhcCCeEEEeeccccccccCCCCCCCCCCCCCccHHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHH
Q psy13951 44 LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAA 113 (130)
Q Consensus 44 ~~~~~g~~vv~~~yrl~~~~~~~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~ 113 (130)
++...+++.++++|..+ + +. -...|++|+.. +|...|.-|+-.|.--||-
T Consensus 84 i~~aD~ivFvtPqYN~g---y------pA--------~LKNAlD~lyh---eW~gKPalivSyGGhGGg~ 133 (199)
T KOG4530|consen 84 ILEADSIVFVTPQYNFG---Y------PA--------PLKNALDWLYH---EWAGKPALIVSYGGHGGGR 133 (199)
T ss_pred HhhcceEEEecccccCC---C------ch--------HHHHHHHHhhh---hhcCCceEEEEecCCCCch
Confidence 55556889999999854 1 11 34578888875 3677787777777744443
No 354
>COG3675 Predicted lipase [Lipid metabolism]
Probab=22.52 E-value=42 Score=24.89 Aligned_cols=32 Identities=22% Similarity=0.243 Sum_probs=23.1
Q ss_pred HHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 85 ALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 85 a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
-.+|+.+.+.. .-+|++.|||.|+.++.....
T Consensus 163 q~~~lleeiP~----~Yrig~tghS~g~aii~vrGt 194 (332)
T COG3675 163 QEQTLLEEIPQ----GYRIGITGHSSGGAIICVRGT 194 (332)
T ss_pred HHHHHHHhccc----ceEEEEEeecCCccEEEEecc
Confidence 55667666543 157999999999998876554
No 355
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=22.52 E-value=1.6e+02 Score=19.52 Aligned_cols=23 Identities=9% Similarity=0.234 Sum_probs=17.8
Q ss_pred hhhCCCCCCeEEEEcChhHHHHH
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASIN 116 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~ 116 (130)
.+++++++++.++|+|.-+..++
T Consensus 172 ~~~~~~~~~~i~vGD~~~Di~aA 194 (197)
T TIGR01548 172 KALGVEACHAAMVGDTVDDIITG 194 (197)
T ss_pred HHhCcCcccEEEEeCCHHHHHHH
Confidence 34577899999999998665554
No 356
>PRK15219 carbonic anhydrase; Provisional
Probab=22.42 E-value=1.2e+02 Score=21.77 Aligned_cols=33 Identities=18% Similarity=0.266 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHH
Q psy13951 81 DQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFL 118 (130)
Q Consensus 81 D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~ 118 (130)
|+..+++|..... ..+.|+|+|||.=|.+.+.+
T Consensus 128 ~~~~slEyAv~~L-----~v~~IvVlGHt~CGav~Aa~ 160 (245)
T PRK15219 128 DLLGSMEFACAVA-----GAKVVLVMGHTACGAVKGAI 160 (245)
T ss_pred chhhHHHHHHHHc-----CCCEEEEecCCcchHHHHHH
Confidence 5677888877654 35799999999766555543
No 357
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=22.14 E-value=3.1e+02 Score=19.75 Aligned_cols=19 Identities=5% Similarity=-0.230 Sum_probs=16.6
Q ss_pred CCCeEEEEcChhHHHHHHH
Q psy13951 100 PTSVTLMGHGTGAASINFL 118 (130)
Q Consensus 100 ~~ri~l~G~SaGg~~a~~~ 118 (130)
..++.|..+|.-.|+|..+
T Consensus 254 ~a~l~I~~DSgp~HlAaa~ 272 (319)
T TIGR02193 254 GADAVVGVDTGLTHLAAAL 272 (319)
T ss_pred cCCEEEeCCChHHHHHHHc
Confidence 4789999999999999865
No 358
>PRK13936 phosphoheptose isomerase; Provisional
Probab=21.73 E-value=2.7e+02 Score=18.88 Aligned_cols=33 Identities=15% Similarity=0.254 Sum_probs=21.8
Q ss_pred HHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 84 AALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 84 ~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
++++.+.+... +..||.++|....+.+|..++.
T Consensus 31 ~a~~~~~~~l~----~a~~I~i~G~G~S~~~A~~~~~ 63 (197)
T PRK13936 31 QAVELMVQALL----NEGKILACGNGGSAADAQHFSA 63 (197)
T ss_pred HHHHHHHHHHH----CCCEEEEEeCcHhHHHHHHHHH
Confidence 44444444433 3689999998887777776664
No 359
>TIGR00385 dsbE periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily. Involved in the biogenesis of c-type cytochromes as well as in disulfide bond formation in some periplasmic proteins.
Probab=21.60 E-value=85 Score=20.65 Aligned_cols=40 Identities=10% Similarity=0.101 Sum_probs=24.5
Q ss_pred CCceEEEEEeCCCcccCCCCcchhHHHhhcCCeEEEeeccc
Q psy13951 18 RRHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFR 58 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~~~g~~vv~~~yr 58 (130)
+..+++|++. +.|+...........-..+.++.++.+++.
T Consensus 62 ~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~vi~V~~~ 101 (173)
T TIGR00385 62 QGKPVLLNVW-ASWCPPCRAEHPYLNELAKDGLPIVGVDYK 101 (173)
T ss_pred CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHcCCEEEEEECC
Confidence 3568999998 467665444333333233457888888754
No 360
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=21.51 E-value=1.3e+02 Score=20.58 Aligned_cols=33 Identities=15% Similarity=0.251 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 82 QVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 82 ~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
+..+++|..... ..+.|+|+|||-=|.+.+.+.
T Consensus 73 ~~asleyav~~l-----~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 73 TSAAIEYAVAVL-----KVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred hhhhHHHHHHHh-----CCCEEEEeCCCcchHHHHHhc
Confidence 567788776654 357999999997666665543
No 361
>PRK01253 preprotein translocase subunit SecG; Reviewed
Probab=21.37 E-value=82 Score=16.95 Aligned_cols=37 Identities=19% Similarity=0.347 Sum_probs=26.6
Q ss_pred HHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHHh
Q psy13951 84 AALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 84 ~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
-.++|-.+......+||+-+.+++-..++.....-..
T Consensus 15 GL~ryy~ed~~~iKi~P~~Vi~~~~~~~~~v~~L~~~ 51 (54)
T PRK01253 15 GLIRYFEEETEAIKIDPKTVIAIGLALGIFVLVLNAL 51 (54)
T ss_pred hhhhhhhcccCccccCCeeeeeeHHHHHHHHHHHHhh
Confidence 4566666655667789999999988888776665443
No 362
>cd02421 Peptidase_C39_likeD A sub-family of peptidase family C39. Peptidase family C39 mostly contains bacteriocin-processing endopeptidases from bacteria. The cysteine peptidases in family C39 cleave the "double-glycine" leader peptides from the precursors of various bacteriocins (mostly non-lantibiotic). The cleavage is mediated by the transporter as part of the secretion process. Bacteriocins are antibiotic proteins secreted by some species of bacteria that inhibit the growth of other bacterial species. The bacteriocin is synthesized as a precursor with an N-terminal leader peptide, and processing involves removal of the leader peptide by cleavage at a Gly-Gly bond, followed by translocation of the mature bacteriocin across the cytoplasmic membrane. Most endopeptidases of family C39 are N-terminal domains in larger proteins (ABC transporters) that serve both functions. The proposed protease active site is not conserved in this sub-family.
Probab=21.35 E-value=79 Score=19.15 Aligned_cols=17 Identities=0% Similarity=0.012 Sum_probs=13.3
Q ss_pred CCCceEEEEEeCCCccc
Q psy13951 17 YRRHSVLVIIHGESYSF 33 (130)
Q Consensus 17 ~~~~Pvvv~iHGGg~~~ 33 (130)
+.+.|+|++.++|.|..
T Consensus 67 ~~~lP~i~~~~~g~~~V 83 (124)
T cd02421 67 TLLLPAILLLKNGRACV 83 (124)
T ss_pred cccCCEEEEEcCCCEEE
Confidence 34689999999987754
No 363
>PRK10382 alkyl hydroperoxide reductase subunit C; Provisional
Probab=21.09 E-value=1.5e+02 Score=20.09 Aligned_cols=38 Identities=5% Similarity=-0.000 Sum_probs=23.0
Q ss_pred CceEEEEEeCCCcccCCCCcchhHH----HhhcCCeEEEeec
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFV----LASYANMVVVTFN 56 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~----~~~~~g~~vv~~~ 56 (130)
..++||+++-+.|+..-......+. -..+.|+.|+.+.
T Consensus 31 Gk~vvL~F~P~~~~p~C~~el~~l~~~~~~f~~~g~~vigIS 72 (187)
T PRK10382 31 GRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVS 72 (187)
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 3489999998888765544322222 2234577676665
No 364
>PRK15000 peroxidase; Provisional
Probab=21.06 E-value=1.5e+02 Score=20.24 Aligned_cols=38 Identities=11% Similarity=0.088 Sum_probs=23.8
Q ss_pred CceEEEEEeCCCcccCCCCcchhHH----HhhcCCeEEEeec
Q psy13951 19 RHSVLVIIHGESYSFGSGNIYDGFV----LASYANMVVVTFN 56 (130)
Q Consensus 19 ~~Pvvv~iHGGg~~~g~~~~~~~~~----~~~~~g~~vv~~~ 56 (130)
..++||++|-+.|+..-......+. -..+.|+.|+.+.
T Consensus 34 gk~vvL~F~p~~~t~vC~~El~~l~~~~~~f~~~g~~vigvS 75 (200)
T PRK15000 34 GKTTVLFFWPMDFTFVCPSELIAFDKRYEEFQKRGVEVVGVS 75 (200)
T ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 4589999999988765554322222 2234677777665
No 365
>PF09177 Syntaxin-6_N: Syntaxin 6, N-terminal; InterPro: IPR015260 Members of this entry, which are found in the amino terminus of various SNARE proteins, adopt a structure consisting of an antiparallel three-helix bundle. Their exact function has not been determined, though it is known that they regulate the SNARE motif, as well as mediate various protein-protein interactions involved in membrane-transport []. ; GO: 0048193 Golgi vesicle transport, 0016020 membrane; PDB: 1LVF_B 2C5I_T 2C5J_A 2C5K_T 4DND_A.
Probab=20.95 E-value=24 Score=21.15 Aligned_cols=24 Identities=17% Similarity=0.271 Sum_probs=15.3
Q ss_pred ccHHHHHHHHHHHHHhhhhhCCCC
Q psy13951 77 FGIMDQVAALQWIKDNIEHFGGDP 100 (130)
Q Consensus 77 ~~~~D~~~a~~~l~~~~~~~~~d~ 100 (130)
+.++|...++.-+.++..+|+++.
T Consensus 53 ~~L~DL~~aV~ive~np~kF~l~~ 76 (97)
T PF09177_consen 53 WDLEDLEEAVRIVEKNPSKFNLSE 76 (97)
T ss_dssp HHHHHHHHHHHHHHCCHHHHT-HH
T ss_pred HHHHHHHHHHHHHHhCccccCCCH
Confidence 456677777777766767776654
No 366
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=20.86 E-value=1.4e+02 Score=22.15 Aligned_cols=22 Identities=18% Similarity=0.013 Sum_probs=17.3
Q ss_pred CCCCeEEEEcChhHHHHHHHHh
Q psy13951 99 DPTSVTLMGHGTGAASINFLML 120 (130)
Q Consensus 99 d~~ri~l~G~SaGg~~a~~~~~ 120 (130)
+....++.|||.|=+.|+.++-
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4456699999999888887653
No 367
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=20.81 E-value=78 Score=21.59 Aligned_cols=18 Identities=28% Similarity=0.340 Sum_probs=15.1
Q ss_pred CCeEEEEcChhHHHHHHH
Q psy13951 101 TSVTLMGHGTGAASINFL 118 (130)
Q Consensus 101 ~ri~l~G~SaGg~~a~~~ 118 (130)
+...+.|.|||+.+....
T Consensus 113 ~G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 113 RGVVIGGTSAGAAVMGET 130 (210)
T ss_pred cCCeEEEcCHHHHHhhhc
Confidence 468999999999888763
No 368
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=20.67 E-value=1.1e+02 Score=20.70 Aligned_cols=26 Identities=12% Similarity=0.148 Sum_probs=19.9
Q ss_pred hhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 94 EHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 94 ~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
.+++++|+++.++|+|..+..++.-+
T Consensus 153 ~~~~~~p~~~l~igDs~~di~aA~~a 178 (221)
T PRK10563 153 EAMNVNVENCILVDDSSAGAQSGIAA 178 (221)
T ss_pred HHcCCCHHHeEEEeCcHhhHHHHHHC
Confidence 45677899999999999876665543
No 369
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=20.61 E-value=2.4e+02 Score=17.97 Aligned_cols=34 Identities=15% Similarity=0.151 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHH
Q psy13951 79 IMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINF 117 (130)
Q Consensus 79 ~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~ 117 (130)
-.+....++|..... ..+.|+|+|||-=|.+...
T Consensus 38 ~~~~~~sle~av~~l-----~v~~IiV~gHt~CGa~~~~ 71 (153)
T PF00484_consen 38 DDSALASLEYAVYHL-----GVKEIIVCGHTDCGAIKAA 71 (153)
T ss_dssp -HHHHHHHHHHHHTS-----T-SEEEEEEETT-HHHHHH
T ss_pred ccchhhheeeeeecC-----CCCEEEEEcCCCchHHHHH
Confidence 346778888876544 3589999999987666644
No 370
>PF07449 HyaE: Hydrogenase-1 expression protein HyaE; InterPro: IPR010893 This family contains bacterial hydrogenase-1 expression proteins approximately 120 residues long. This includes the Escherichia coli protein HyaE, and the homologous proteins HoxO of Ralstonia eutropha (Alcaligenes eutrophus) and HupG of Rhizobium leguminosarum. Deletion of the hoxO gene in R. eutropha led to complete loss of the uptake [NiFe] hydrogenase activity, suggesting that it has a critical role in hydrogenase assembly [].; PDB: 2QSI_B 2ES7_A 2GZP_A 2JZT_A 2HFD_A 2QGV_G.
Probab=20.55 E-value=75 Score=19.69 Aligned_cols=16 Identities=31% Similarity=0.391 Sum_probs=12.9
Q ss_pred CCceEEEEEeCCCccc
Q psy13951 18 RRHSVLVIIHGESYSF 33 (130)
Q Consensus 18 ~~~Pvvv~iHGGg~~~ 33 (130)
.+.|.+|++++|-+..
T Consensus 81 ~~~PaLvf~R~g~~lG 96 (107)
T PF07449_consen 81 RRWPALVFFRDGRYLG 96 (107)
T ss_dssp TSSSEEEEEETTEEEE
T ss_pred ccCCeEEEEECCEEEE
Confidence 3679999999987753
No 371
>PLN02154 carbonic anhydrase
Probab=20.46 E-value=1.4e+02 Score=22.08 Aligned_cols=34 Identities=15% Similarity=0.350 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 81 DQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 81 D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
.+.++++|..... ..+.|+|+|||-=|.+.+.+.
T Consensus 151 ~~~aslEyAv~~L-----~v~~IvV~GHs~CGAV~Aal~ 184 (290)
T PLN02154 151 ETNSALEFAVTTL-----QVENIIVMGHSNCGGIAALMS 184 (290)
T ss_pred chhhHHHHHHHHh-----CCCEEEEecCCCchHHHHHHh
Confidence 3566777776654 357999999997666555543
No 372
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=20.14 E-value=1e+02 Score=22.18 Aligned_cols=28 Identities=29% Similarity=0.621 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhhhhhCCCCCCeEEEEc
Q psy13951 81 DQVAALQWIKDNIEHFGGDPTSVTLMGH 108 (130)
Q Consensus 81 D~~~a~~~l~~~~~~~~~d~~ri~l~G~ 108 (130)
|...-++||.+.+.+.....++|.|++|
T Consensus 194 ~~~~Ql~WL~~~L~~a~~~~~~v~I~~H 221 (296)
T cd00842 194 DPAGQLQWLEDELQEAEQAGEKVWIIGH 221 (296)
T ss_pred CHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 4467788888777654333478989887
No 373
>PLN00416 carbonate dehydratase
Probab=20.12 E-value=1.3e+02 Score=21.69 Aligned_cols=34 Identities=12% Similarity=0.237 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHhhhhhCCCCCCeEEEEcChhHHHHHHHH
Q psy13951 81 DQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLM 119 (130)
Q Consensus 81 D~~~a~~~l~~~~~~~~~d~~ri~l~G~SaGg~~a~~~~ 119 (130)
++..+++|...... .+.|+|+|||-=|.+.+.+.
T Consensus 125 ~~~asLEyAv~~L~-----V~~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 125 GVGAAVEYAVVHLK-----VENILVIGHSCCGGIKGLMS 158 (258)
T ss_pred cchhHHHHHHHHhC-----CCEEEEecCCCchHHHHHHh
Confidence 45577888776653 47999999997666555543
Done!