RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy13951
(130 letters)
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse,
membrane, nerve, muscle neurotransmitter degradation,
glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila
melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Length = 585
Score = 163 bits (415), Expect = 4e-49
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 2 QPNLPEALSPDSSRTYRRHSVLVIIHGESYSFGSGN--IYDGFVLASYANMVVVTFNFRL 59
+ + T +L+ I+G + GS IY+ ++A+ N++V +F +R+
Sbjct: 123 ADTDHLIHNGNPQNTTNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRV 182
Query: 60 GILGFLRPG-VGSSTVT-----NFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAA 113
G GFL S N G+ DQ A++W+KDN FGG+P +TL G G++
Sbjct: 183 GAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSS 242
Query: 114 SINFLMLSPL 123
S+N ++SP+
Sbjct: 243 SVNAQLMSPV 252
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase;
HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP:
c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A*
1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A*
2hrq_A* 3k9b_A* 1k4y_A*
Length = 542
Score = 162 bits (412), Expect = 8e-49
Identities = 53/114 (46%), Positives = 71/114 (62%), Gaps = 1/114 (0%)
Query: 10 SPDSSRTYRRHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGV 69
+P R V+V IHG G+ + YDG LA++ N+VVVT +RLGI GF G
Sbjct: 105 TPADLTKKNRLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGD 164
Query: 70 GSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSPL 123
S N+G +DQVAAL+W++DNI FGG+P SVT+ G G S++ L+LSPL
Sbjct: 165 EHSR-GNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPL 217
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod
glycosylated protein, hydrolase; HET: NAG FUC SCK SCU
P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A*
1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A*
2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A*
2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Length = 543
Score = 161 bits (408), Expect = 3e-48
Identities = 45/116 (38%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 10 SPDSSRTYRRHSVLVIIHGESYSFGSGN--IYDGFVLASYANMVVVTFNFRLGILGFLRP 67
+P VL+ I+G + G+ + +YDG LA V+V+ N+R+G GFL
Sbjct: 103 TPYPRPASPT-PVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLAL 161
Query: 68 GVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSPL 123
N G++DQ ALQW+++NI FGGDP SVTL G GAAS+ +LS
Sbjct: 162 PGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLP 217
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC
MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A*
1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A*
3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A*
2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Length = 529
Score = 159 bits (404), Expect = 1e-47
Identities = 45/108 (41%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 18 RRHSVLVIIHGESYSFGSGN--IYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVT 75
+ +VL+ I+G + G+ + +YDG LA ++VV+ N+R+G LGFL
Sbjct: 105 KNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPG 164
Query: 76 NFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSPL 123
N G+ DQ ALQW++ NI FGG+P SVTL G GAAS++ +LSP
Sbjct: 165 NMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPG 212
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase,
cell adhesion, cell J glycoprotein, membrane,
postsynaptic cell membrane; HET: NAG; 1.80A {Rattus
norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A*
2vh8_A 3bl8_A*
Length = 574
Score = 159 bits (405), Expect = 1e-47
Identities = 52/114 (45%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
Query: 11 PDSSRTYRRHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVG 70
D + V+V IHG SY G+GN+YDG VLASY N++V+T N+RLG+LGFL G
Sbjct: 122 DDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVITVNYRLGVLGFLSTG-- 179
Query: 71 SSTVT-NFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSPL 123
N+G++D + AL+W +NI FGGDP +T+ G G G + +N L LS
Sbjct: 180 DQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHY 233
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase,
neurotransmitter cleavage, catalytic triad, alpha/beta
hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP:
c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A*
1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A
1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A*
1vxr_A* ...
Length = 537
Score = 159 bits (403), Expect = 2e-47
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 18 RRHSVLVIIHGESYSFGSGN--IYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVT 75
+ +V+V I+G + GS +Y+G LA +V+V+ ++R+G GFL
Sbjct: 107 KSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPG 166
Query: 76 NFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSPL 123
N G++DQ ALQW+ DNI+ FGGDP +VT+ G G AS+ +LSP
Sbjct: 167 NVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPG 214
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A
{Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A
1jmy_A
Length = 579
Score = 154 bits (391), Expect = 1e-45
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 21/116 (18%)
Query: 22 VLVIIHGESYSFGSGN--------IYDGFVLASYANMVVVTFNFRLGILGFLR------P 67
V++ I+G ++ G+ +YDG +A+ N++VVTFN+R+G LGFL P
Sbjct: 100 VMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLP 159
Query: 68 GVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSPL 123
G N+G+ DQ A+ W+K NIE FGGDP +TL G G AS++ LSP
Sbjct: 160 G-------NYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPY 208
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase
directed evolution; 1.50A {Bacillus subtilis} SCOP:
c.69.1.1 PDB: 1c7j_A 1c7i_A
Length = 489
Score = 150 bits (381), Expect = 1e-44
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
Query: 22 VLVIIHGESYSFGSGN--IYDGFVLASYANMVVVTFNFRLGILGFLR-PGVGSSTVTNFG 78
V+V IHG ++ G+G+ +YDG LA+ ++VVT N+RLG GFL + N G
Sbjct: 99 VMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLG 158
Query: 79 IMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSPL 123
++DQ AAL+W+++NI FGGDP +VT+ G G SI L+ P
Sbjct: 159 LLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPA 203
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase,
hydrolase; 1.58A {Geobacillus stearothermophilus} PDB:
2ogs_A
Length = 498
Score = 147 bits (373), Expect = 2e-43
Identities = 49/108 (45%), Positives = 68/108 (62%), Gaps = 6/108 (5%)
Query: 22 VLVIIHGESYSFGSGN--IYDGFVLASYANMVVVTFNFRLGILGFL----RPGVGSSTVT 75
VL IHG ++ FGSG+ YDG A + ++VVVT N+R+ + GFL G +
Sbjct: 101 VLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAG 160
Query: 76 NFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSPL 123
N GI+DQVAAL+W+K+NI FGGDP ++T+ G GAAS+ L+ P
Sbjct: 161 NLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPE 208
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase;
HET: TFC; 2.70A {Trichoplusia NI}
Length = 551
Score = 141 bits (358), Expect = 5e-41
Identities = 45/130 (34%), Positives = 61/130 (46%), Gaps = 14/130 (10%)
Query: 1 FQPNLPEALSPDSSRTYRRHSVLVIIHGESYSFGSGN-IYDGFVLASYANMVVVTFNFRL 59
P + VLV IHG ++FGSG+ G +++V+TFN+RL
Sbjct: 96 HVPYYALPRDAADKNRFAGLPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRL 155
Query: 60 GILGFLR------PGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAA 113
+ GFL PG N G+ D V L+W++ N FGG P VTLMG GAA
Sbjct: 156 NVYGFLSLNSTSVPG-------NAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAA 208
Query: 114 SINFLMLSPL 123
+ + L LS
Sbjct: 209 ATHILSLSKA 218
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H;
HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Length = 522
Score = 139 bits (351), Expect = 4e-40
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 22 VLVIIHGESYSFGSGNIYDG--FVLASYANMVVVTFNFRLGILGFLR-PGVGSSTVTNFG 78
V + I G Y+ S Y+G + AS +V VTFN+R+G LGFL V + N G
Sbjct: 104 VWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAG 163
Query: 79 IMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSPL 123
++DQ AL+W+K IE FGGDP + + G GA S+ + + +
Sbjct: 164 LLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYG 208
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A
{Galactomyces geotrichum} SCOP: c.69.1.17
Length = 544
Score = 132 bits (334), Expect = 1e-37
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 22 VLVIIHGESYSFGSGNIYDGFVLASYA-----NMVVVTFNFRLGILGFLR-PGVGSSTVT 75
V+V I+G ++ +GS Y G + +V V+ N+R G GFL + + T
Sbjct: 124 VMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNT 183
Query: 76 NFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSPLLSPSY 128
N G+ DQ L+W+ DNI +FGGDP V + G GA S+ +++ +Y
Sbjct: 184 NAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTY 236
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester
acylh hydrolase; HET: NAG F23; 1.40A {Candida
cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A*
1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A*
1gz7_A*
Length = 534
Score = 129 bits (326), Expect = 2e-36
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 22 VLVIIHGESYSFGSGNIYDGFVLASYA-----NMVVVTFNFRLGILGFLR-PGVGSSTVT 75
V++ I G + GS I+ + + + ++ V N+R+ GFL + +
Sbjct: 116 VMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSG 175
Query: 76 NFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSPLLSPSY 128
N G+ DQ +QW+ DNI FGGDP+ VT+ G G+ S+ ++ +Y
Sbjct: 176 NAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTY 228
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary
alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A
3zwq_A
Length = 313
Score = 46.9 bits (112), Expect = 3e-07
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 24/111 (21%)
Query: 15 RTYR-----RHSVLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLGILGFLRP 67
R YR R +V HG + GS +D LA+ + VVV+ ++RL P
Sbjct: 66 RVYRPRDGERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLA------P 119
Query: 68 GVGSSTVTNF--GIMDQVAALQWIKDNIEHFGGDPTSVTLMGH---GTGAA 113
F + D A +W+ DN + G D + + G G AA
Sbjct: 120 EHK------FPAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAA 164
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold,
hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A
{Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Length = 303
Score = 44.9 bits (106), Expect = 1e-06
Identities = 20/109 (18%), Positives = 37/109 (33%), Gaps = 17/109 (15%)
Query: 22 VLVIIHGESYSFGSGNIYDGFVLASYAN--MVVVTFNFRLGILGFLRPGVGSSTVTNFGI 79
+ V +HG + ++ ++ V ++ L VT +
Sbjct: 84 LFVFVHGGYWQEMDMSMS-CSIVGPLVRRGYRVAVMDYNL-----------CPQVTLEQL 131
Query: 80 MDQVA-ALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLMLSPLLSPS 127
M Q L WI D E +T GH GA + +++ P + +
Sbjct: 132 MTQFTHFLNWIFDYTEMTKVSS--LTFAGHXAGAHLLAQILMRPNVITA 178
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE;
2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Length = 311
Score = 43.4 bits (103), Expect = 4e-06
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 22/109 (20%)
Query: 15 RTYR---RHSVLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLGILGFLRPGV 69
R Y+ VLV HG + S +D +A +N VV+ ++RL P
Sbjct: 71 RVYQQKPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLA------PEH 124
Query: 70 GSSTVTNF--GIMDQVAALQWIKDNIEHFGGDPTSVTLMGH---GTGAA 113
F + D A +W+ +N E DP+ + + G G AA
Sbjct: 125 K------FPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAA 167
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural
genomics, joint center structural genomics, JCSG; HET:
EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Length = 277
Score = 42.9 bits (101), Expect = 5e-06
Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 18/132 (13%)
Query: 5 LPEALSPDSSRTYRRHSVLVIIHGESYSFGSGNIYDGFVLASYAN---MVVVTFNFRLGI 61
+ +S + +++I G +++ SG + +A+ M V N++L
Sbjct: 22 WLDQISDFETAVDY--PIMIICPGGGFTYHSGR--EEAPIATRMMAAGMHTVVLNYQLI- 76
Query: 62 LGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGH---GTGAASINFL 118
VG +V + + A + WI D + L G G A+ N +
Sbjct: 77 -------VGDQSVYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGV 129
Query: 119 MLSPLLSPSYDI 130
P L Y +
Sbjct: 130 ATQPELRTRYHL 141
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2,
protein structure initiative; 3.20A {Lactococcus lactis
subsp}
Length = 276
Score = 42.1 bits (99), Expect = 1e-05
Identities = 17/111 (15%), Positives = 35/111 (31%), Gaps = 14/111 (12%)
Query: 5 LPEALSPDSSRTYRRHSVLVIIHGESYSFGSGNIYDGFVLASYAN---MVVVTFNFRLGI 61
+ + + T+ ++I G Y S + LA V+ N+ +
Sbjct: 31 QLQNPRQNENYTFP---AIIICPGGGYQHISQR--ESDPLALAFLAQGYQVLLLNYTVM- 84
Query: 62 LGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGA 112
+ + + + A I N + + +P V L+G G
Sbjct: 85 -----NKGTNYNFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGG 130
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A
{Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A
1qz3_A
Length = 310
Score = 41.4 bits (98), Expect = 2e-05
Identities = 31/112 (27%), Positives = 41/112 (36%), Gaps = 25/112 (22%)
Query: 15 RTYR------RHSVLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLGILGFLR 66
R YR + LV HG S+ G +D LA VV + ++RL
Sbjct: 63 RMYRPEGVEPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLA------ 116
Query: 67 PGVGSSTVTNF--GIMDQVAALQWIKDNIEHFGGDPTSVTLMGH---GTGAA 113
P F + D ALQWI + F DP + + G G AA
Sbjct: 117 PEHK------FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAA 162
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme,
hydrolase, HSL, alpha/beta hydrolase fold; 2.3A
{Uncultured archaeon}
Length = 311
Score = 40.3 bits (95), Expect = 4e-05
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 24/111 (21%)
Query: 15 RTYR-----RHSVLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLGILGFLRP 67
R Y ++ HG + FGS +D L+ ++ VVV+ ++RL P
Sbjct: 63 RVYFPKKAAGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLA------P 116
Query: 68 GVGSSTVTNF--GIMDQVAALQWIKDNIEHFGGDPTSVTLMGH---GTGAA 113
F + D AAL+W+ D + G DP + + G G AA
Sbjct: 117 EYK------FPTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAA 161
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine
structural genomics, center for structural genomics of
INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella
typhimurium}
Length = 326
Score = 39.6 bits (93), Expect = 9e-05
Identities = 17/116 (14%), Positives = 34/116 (29%), Gaps = 35/116 (30%)
Query: 15 RTYR----RHSVLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRL--------G 60
R Y + L +HG + G+ + +D + LA Y V+ ++ L
Sbjct: 78 RLYSPQPTSQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQARYPQA 137
Query: 61 ILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGH---GTGAA 113
I + VA + + + + + + G A
Sbjct: 138 IE------------------ETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLAL 175
>3bjr_A Putative carboxylesterase; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Length = 283
Score = 38.7 bits (90), Expect = 2e-04
Identities = 16/105 (15%), Positives = 32/105 (30%), Gaps = 13/105 (12%)
Query: 11 PDSSRTYRRHSVLVIIHGESYSFGSGNIYDGFVLASYAN---MVVVTFNFRLGILGFLRP 67
PD++ ++I+ G SY+ LA + L
Sbjct: 41 PDTNAHQTNLPAIIIVPGGSYTHIPVA--QAESLAMAFAGHGYQAFYLEYTLL------T 92
Query: 68 GVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGA 112
+ ++D A+ ++ + + DP +T G G
Sbjct: 93 DQQPLGLAP--VLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGG 135
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural
genomics CEN infectious disease, tuberculosis, O LIPW,
heroin esterase; 1.75A {Mycobacterium marinum}
Length = 317
Score = 38.8 bits (91), Expect = 2e-04
Identities = 25/110 (22%), Positives = 39/110 (35%), Gaps = 23/110 (20%)
Query: 15 RTYR----RHSVLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLGILGFLRPG 68
R YR V+V H ++ G+ + LA A VV+ ++RL P
Sbjct: 76 RIYRAAPTPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLA------PE 129
Query: 69 VGSSTVTNF--GIMDQVAALQWIKDNIEHFGGDPTSVTLMGH---GTGAA 113
+ + D + L W+ N G D + + G T AA
Sbjct: 130 ------HPYPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAA 173
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO
PSI-2, protein structure initiative, midwest center for
STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Length = 274
Score = 38.7 bits (90), Expect = 2e-04
Identities = 15/106 (14%), Positives = 29/106 (27%), Gaps = 24/106 (22%)
Query: 15 RTYRRHS----VLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLGILGFLRPG 68
Y + +V +HG +G+ + + L + V+ ++ L P
Sbjct: 18 TIYPTTTEPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLA------PN 71
Query: 69 VGSSTVTNF--GIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGA 112
T + Q + + S L G G
Sbjct: 72 ------TKIDHILRTLTETFQLLNEE----IIQNQSFGLCGRSAGG 107
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP:
c.69.1.2 PDB: 1lzk_A
Length = 323
Score = 37.6 bits (88), Expect = 4e-04
Identities = 26/103 (25%), Positives = 38/103 (36%), Gaps = 22/103 (21%)
Query: 15 RTYR------RHSVLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLGILGFLR 66
R VL+ IHG ++ G+ D F +A V +RL
Sbjct: 68 RFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLA------ 121
Query: 67 PGVGSSTVTNF--GIMDQVAALQWIKDNIEHFGGDPTSVTLMG 107
P T F + D AAL +I + E G DP+ + + G
Sbjct: 122 PE------TTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGG 158
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia
eriantha} PDB: 2o7v_A
Length = 338
Score = 37.7 bits (88), Expect = 4e-04
Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 33/116 (28%)
Query: 5 LPEALSPDSSRTYRRHSVLVIIHGESYSFGSGN--IYDGFV--LASYANMVVVTFNFRLG 60
LP +S + ++V HG + S I+ F +A +A +V+ + ++RL
Sbjct: 72 LPRHALYNS----AKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLA 127
Query: 61 ILGFLRP------GVGSSTVTNFGIMDQVAALQWIKDNIEHF---GGDPTSVTLMG 107
P D + ALQWIKD+ + + D ++ +MG
Sbjct: 128 ------PEHRLPAAYD----------DAMEALQWIKDSRDEWLTNFADFSNCFIMG 167
>1vkh_A Putative serine hydrolase; structural genomics, joint center
structural genomics, JCSG, protein structure initiative,
PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae}
SCOP: c.69.1.32
Length = 273
Score = 36.5 bits (84), Expect = 0.001
Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 24/99 (24%)
Query: 22 VLVIIHGESYSFGSGNIYDGFVLASY-------ANMVVVTFNFRLGILGFLRPGVGSSTV 74
++ IHG +++ D LA+ + + + +RL S +
Sbjct: 43 AVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRL-----------SPEI 91
Query: 75 TNFGIMDQV-AALQWIKDNIEHFGGDPTSVTLMGHGTGA 112
TN + + + + T++ ++GH GA
Sbjct: 92 TNPRNLYDAVSNITRLVKE-----KGLTNINMVGHSVGA 125
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A,
alpha/beta hydrolase family; 1.85A {Bacillus subtilis}
SCOP: c.69.1.2
Length = 361
Score = 36.7 bits (85), Expect = 0.001
Identities = 23/104 (22%), Positives = 37/104 (35%), Gaps = 27/104 (25%)
Query: 15 RTYRRHS------VLVIIHGESYSFGS--GNIYDGFV--LASYANMVVVTFNFRLGILG- 63
+R LV HG + + ++ + LA+ A VVV +FR
Sbjct: 98 HVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAA-AGSVVVMVDFRNAWTAE 156
Query: 64 ----FLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSV 103
F P G+ D +AA+ W+ ++ E G V
Sbjct: 157 GHHPF--PS---------GVEDCLAAVLWVDEHRESLGLSGVVV 189
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase,
gibberellin signaling pathway, hydrolase, nucleus,
hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp}
PDB: 3ed1_A*
Length = 365
Score = 36.6 bits (85), Expect = 0.001
Identities = 22/119 (18%), Positives = 33/119 (27%), Gaps = 32/119 (26%)
Query: 3 PNLPEALSPDSSRTYRRHSVLVIIHGESYSFGSGN--IYDGFV--LASYANMVVVTFNFR 58
P + V++ HG S+ S + IYD + VVV+ N+R
Sbjct: 95 VTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYR 154
Query: 59 L--------GILGFLRPGVGSSTVTNFGIMDQVAALQWIKDN--IEHFGGDPTSVTLMG 107
D AL+W+ + G V L G
Sbjct: 155 RAPEHRYPCAYD------------------DGWTALKWVMSQPFMRSGGDAQARVFLSG 195
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic,
dimer, archaea, R267G, hydro; 1.65A {Sulfolobus
tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Length = 323
Score = 36.1 bits (84), Expect = 0.002
Identities = 23/102 (22%), Positives = 38/102 (37%), Gaps = 22/102 (21%)
Query: 15 RTYR-----RHSVLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLGILGFLRP 67
R Y + VLV HG + G YD + + V ++ ++RL P
Sbjct: 80 RVYYPKTQGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLA------P 133
Query: 68 GVGSSTVTNF--GIMDQVAALQWIKDNIEHFGGDPTSVTLMG 107
F ++D AL+W+ +N E F + + G
Sbjct: 134 ENK------FPAAVVDSFDALKWVYNNSEKF-NGKYGIAVGG 168
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured
bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A*
3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Length = 322
Score = 35.7 bits (83), Expect = 0.002
Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 23/105 (21%)
Query: 7 EALSPDSSRTYRRHSVLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLGILGF 64
E + + + ++ +HG Y GS N + V ++ + + ++RL
Sbjct: 70 EWVRAPGCQAGK---AILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLA---- 122
Query: 65 LRPGVGSSTVTNF--GIMDQVAALQWIKDNIEHFGGDPTSVTLMG 107
P F + D VAA +W+ D G P +++ G
Sbjct: 123 --PE------HPFPAAVEDGVAAYRWLLDQ----GFKPQHLSISG 155
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured
bacterium} PDB: 3dnm_A
Length = 322
Score = 34.6 bits (80), Expect = 0.005
Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 20/90 (22%)
Query: 22 VLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNF-- 77
++ HG Y GS + + LA ++ + + ++RL P F
Sbjct: 82 HILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLA------P------ENPFPA 129
Query: 78 GIMDQVAALQWIKDNIEHFGGDPTSVTLMG 107
+ D VAA + + G + + G
Sbjct: 130 AVDDCVAAYRALLKT----AGSADRIIIAG 155
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor,
gibberellin, gibberellin signaling pathway, hydrolase,
nucleus, receptor, developmental protein; HET: GA3;
1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Length = 351
Score = 34.3 bits (79), Expect = 0.006
Identities = 25/123 (20%), Positives = 37/123 (30%), Gaps = 28/123 (22%)
Query: 2 QPNLPEALSPDSSRTYRRHSVLVIIHGESYSFGSGN--IYDGFV--LASYANMVVVTFNF 57
Q P L + V++ HG S++ S N IYD L VVV+ N+
Sbjct: 95 QEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNY 154
Query: 58 RLG------ILGFLRPGVGSSTVTNFGIMDQVAALQWIKDN--IEHFGGDPTSVTLMGHG 109
R D AL W+ ++ + L G
Sbjct: 155 RRAPENPYPC----------------AYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDS 198
Query: 110 TGA 112
+G
Sbjct: 199 SGG 201
>3h04_A Uncharacterized protein; protein with unknown function, structural
genomics, MCSG, PS protein structure initiative; 1.90A
{Staphylococcus aureus subsp}
Length = 275
Score = 32.9 bits (75), Expect = 0.015
Identities = 17/95 (17%), Positives = 30/95 (31%), Gaps = 22/95 (23%)
Query: 22 VLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRLGILGFLRPGVGSSTVTNF-- 77
V+V IHG FG N + + + ++ ++RL +
Sbjct: 31 VIVYIHGGGLMFGKANDLSPQYIDILT-EHYDLIQLSYRL------------LPEVSLDC 77
Query: 78 GIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGA 112
I D A+ I+ + G +GA
Sbjct: 78 IIEDVYASFDAIQSQY-----SNCPIFTFGRSSGA 107
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus
subsp}
Length = 326
Score = 32.7 bits (75), Expect = 0.019
Identities = 5/40 (12%), Positives = 12/40 (30%), Gaps = 2/40 (5%)
Query: 22 VLVIIHGESYSFGSGNIYDGFV--LASYANMVVVTFNFRL 59
++ IHG + + + + VV +
Sbjct: 98 KILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPK 137
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase
fold, carboxylesterase, Ser- hydrolase; 2.00A
{Streptococcus mutans}
Length = 292
Score = 29.6 bits (66), Expect = 0.26
Identities = 15/87 (17%), Positives = 29/87 (33%), Gaps = 12/87 (13%)
Query: 22 VLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLGILGFLRPGVGSSTVTNFGIMD 81
V + G + F + + + + ++ ++T + P G S V+N +
Sbjct: 43 CFVFLSG-AGFFSTADNFANIIDKLPDSIGILTID---------APNSGYSPVSNQANVG 92
Query: 82 QVAALQWIKDNIEHFGGDPTSVTLMGH 108
+ I EHF L H
Sbjct: 93 LRDWVNAILMIFEHFKFQS--YLLCVH 117
Score = 29.2 bits (65), Expect = 0.38
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 93 IEHFGGDPTSVTLMGHGTGAASINFLMLSPLLSPSYDI 130
H G+P V L G G + + NF + L S I
Sbjct: 35 TCHREGNPCFVFLSGAGFFSTADNFANIIDKLPDSIGI 72
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 26.7 bits (58), Expect = 2.4
Identities = 22/131 (16%), Positives = 39/131 (29%), Gaps = 24/131 (18%)
Query: 4 NLPEALSPDSSRTYRRHSVLVIIHGESYSFGSGNIYDGFVLASYA---NMVVVTFNFRLG 60
L +AL V+I G GSG +A V +F
Sbjct: 139 KLRQALLELRPAKN------VLIDG---VLGSGKT----WVALDVCLSYKVQCKMDF--K 183
Query: 61 ILGF-LRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLM 119
I F L + + +++ + L + D D +S + + A + L+
Sbjct: 184 I--FWLN--LKNCNSPE-TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238
Query: 120 LSPLLSPSYDI 130
S +
Sbjct: 239 KSKPYENCLLV 249
>2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana}
Length = 419
Score = 26.6 bits (58), Expect = 2.6
Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 63 GFLRPGVGSSTVTNFGIMD-QVAALQWIKDNIEHFGGDPTSVTLMGHGTGAA 113
G+ + + F + + L+ + +E + + S+T+ GH GAA
Sbjct: 189 GWYSIYMSQDERSPFTKTNARDQVLREVGRLLEKYKDEEVSITICGHSLGAA 240
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A
{Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Length = 269
Score = 26.5 bits (58), Expect = 3.0
Identities = 22/110 (20%), Positives = 36/110 (32%), Gaps = 20/110 (18%)
Query: 3 PNLPEALSPDSSRTYRRHSV--LVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLG 60
P+ EAL+ + + +V L I GE + ++ F+
Sbjct: 65 PSPAEALAGMAEEGFTHVAVQSLHTIPGEEFH----------------GLLETAHAFQGL 108
Query: 61 ILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGT 110
G R VG + + VA + ++ V MGHGT
Sbjct: 109 PKGLTRVSVGLPLIGTTADAEAVAEA--LVASLPADRKPGEPVVFMGHGT 156
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase
fold, structural genomics, structural G of pathogenic
protozoa consortium; 2.20A {Trypanosoma brucei}
Length = 335
Score = 26.2 bits (57), Expect = 3.3
Identities = 18/129 (13%), Positives = 35/129 (27%), Gaps = 12/129 (9%)
Query: 1 FQPNLPEALSPDSSRTYRRHSVLVIIHGESYSFGSGNIYDGFVLASYANMVVVTFNFRLG 60
+ + + R VL + G++ S S + + + V G
Sbjct: 20 YYKDPYCKIPVFMMNMDARRCVLWV-GGQTESLLSFDYFTNLAEELQGDWAFVQVEVPSG 78
Query: 61 ILGFLRPGVGSSTVTNFGIMDQVAALQWIKDNIEHFGGDPTSVTLMGHGTGAASINFLML 120
+G G + D + L + + V L TG + L+
Sbjct: 79 KIGS---GPQDHAHDAEDVDDLIGIL------LRDHCMNE--VALFATSTGTQLVFELLE 127
Query: 121 SPLLSPSYD 129
+ S
Sbjct: 128 NSAHKSSIT 136
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural
genomics, joint CE structural genomics, JCSG, protein
structure initiative; 1.75A {Mesorhizobium loti} SCOP:
c.69.1.14
Length = 223
Score = 25.6 bits (56), Expect = 5.0
Identities = 6/34 (17%), Positives = 15/34 (44%)
Query: 97 GGDPTSVTLMGHGTGAASINFLMLSPLLSPSYDI 130
G + + HG+G + L+ ++P+ +
Sbjct: 26 GKESRECLFLLHGSGVDETTLVPLARRIAPTATL 59
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase,
copper homeostasis, malic acid; 1.88A {Lactococcus
lactis subsp}
Length = 209
Score = 25.1 bits (55), Expect = 7.8
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 97 GGDPTSVTLMGHGTGAASINFLMLSPLLSPSYDI 130
G + L+ H TG + ++ +++PS+ I
Sbjct: 12 GRKDLAPLLLLHSTGGDEHQLVEIAEMIAPSHPI 45
>3tai_A DNA double-strand break repair protein NURA; recombination,
hydrolase; HET: DNA; 2.82A {Pyrococcus furiosus} PDB:
3tal_A* 3taz_A*
Length = 471
Score = 25.3 bits (54), Expect = 8.3
Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 14/80 (17%)
Query: 12 DSSRTYRRHSVLVIIHGESYSFGSGN----IYDGFVLASYAN------MVVVTFNFRLGI 61
D SR+ R S VI + + GSG Y + ++Y M + T LG
Sbjct: 71 DGSRSVSRLSGTVIYFLSALAVGSGKQLRLSYANAIKSNYGTSDQIVRMQMETLENMLGY 130
Query: 62 LGFLRPGVGSSTVTNFGIMD 81
L + + + +MD
Sbjct: 131 LAYRKLEGEKRAI----LMD 146
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 25.0 bits (54), Expect = 9.6
Identities = 8/26 (30%), Positives = 10/26 (38%), Gaps = 4/26 (15%)
Query: 83 VAALQWIKDNIEHFGGDPTSVTLMGH 108
AA + +K G P T GH
Sbjct: 1741 KAAFEDLKSK----GLIPADATFAGH 1762
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.139 0.417
Gapped
Lambda K H
0.267 0.0586 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,104,609
Number of extensions: 123742
Number of successful extensions: 354
Number of sequences better than 10.0: 1
Number of HSP's gapped: 321
Number of HSP's successfully gapped: 58
Length of query: 130
Length of database: 6,701,793
Length adjustment: 83
Effective length of query: 47
Effective length of database: 4,384,350
Effective search space: 206064450
Effective search space used: 206064450
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.1 bits)