BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13955
(74 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8N2Q7|NLGN1_HUMAN Neuroligin-1 OS=Homo sapiens GN=NLGN1 PE=1 SV=2
Length = 840
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 23 ETDQ------SVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
+TDQ + G+EVPY LG+P+ G + ++ + + S V++T+ +NFA++G
Sbjct: 510 QTDQVPAWADAAHGDEVPYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTG 567
>sp|Q62765|NLGN1_RAT Neuroligin-1 OS=Rattus norvegicus GN=Nlgn1 PE=1 SV=1
Length = 843
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 23 ETDQ------SVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
+TDQ + G+EVPY LG+P+ G + ++ + + S V++T+ +NFA++G
Sbjct: 513 QTDQVPAWADAAHGDEVPYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTG 570
>sp|Q99K10|NLGN1_MOUSE Neuroligin-1 OS=Mus musculus GN=Nlgn1 PE=1 SV=2
Length = 843
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 23 ETDQ------SVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
+TDQ + G+EVPY LG+P+ G + ++ + + S V++T+ +NFA++G
Sbjct: 513 QTDQVPAWADAAHGDEVPYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTG 570
>sp|Q8N0W4|NLGNX_HUMAN Neuroligin-4, X-linked OS=Homo sapiens GN=NLGN4X PE=1 SV=1
Length = 816
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 27 SVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
S G+EVPY G+P+ G + ++ + + S V++T+ +NFA++G
Sbjct: 487 SAHGDEVPYVFGIPMIGPTELFSCNFSKNDVMLSAVVMTYWTNFAKTG 534
>sp|Q8NFZ3|NLGNY_HUMAN Neuroligin-4, Y-linked OS=Homo sapiens GN=NLGN4Y PE=2 SV=1
Length = 816
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 27 SVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
S G+EVPY G+P+ G + ++ + + S V++T+ +NFA++G
Sbjct: 487 SAHGDEVPYVFGIPMIGPTELFSCNFSKNDVMLSAVVMTYWTNFAKTG 534
>sp|Q9NZ94|NLGN3_HUMAN Neuroligin-3 OS=Homo sapiens GN=NLGN3 PE=1 SV=2
Length = 848
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 27 SVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
+ G+EVPY GVP+ G + ++ + + S V++T+ +NFA++G
Sbjct: 521 AAHGDEVPYVFGVPMVGPTDLFPCNFSKNDVMLSAVVMTYWTNFAKTG 568
>sp|Q62889|NLGN3_RAT Neuroligin-3 OS=Rattus norvegicus GN=Nlgn3 PE=1 SV=1
Length = 848
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 27 SVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
+ G+EVPY GVP+ G + ++ + + S V++T+ +NFA++G
Sbjct: 521 AAHGDEVPYVFGVPMVGPTDLFPCNFSKNDVMLSAVVMTYWTNFAKTG 568
>sp|Q8BYM5|NLGN3_MOUSE Neuroligin-3 OS=Mus musculus GN=Nlgn3 PE=1 SV=2
Length = 825
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 27 SVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
+ G+EVPY GVP+ G + ++ + + S V++T+ +NFA++G
Sbjct: 498 AAHGDEVPYVFGVPMVGPTDLFPCNFSKNDVMLSAVVMTYWTNFAKTG 545
>sp|Q8WMH2|NLGN3_MACMU Neuroligin-3 (Fragment) OS=Macaca mulatta GN=NLGN3 PE=2 SV=1
Length = 202
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 18 LFCPLETDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
L P +D + G+EVPY GVP+ G + ++ + + S V++T+ +NFA++G
Sbjct: 18 LMKPAWSD-AAHGDEVPYVFGVPMVGPTDLFPCNFSKNDVMLSAVVMTYWTNFAKTG 73
>sp|Q8NFZ4|NLGN2_HUMAN Neuroligin-2 OS=Homo sapiens GN=NLGN2 PE=1 SV=1
Length = 835
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 31/52 (59%)
Query: 23 ETDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
E + G+E+PY GVP+ G + ++ + + S V++T+ +NFA++G
Sbjct: 494 EWADAAHGDELPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTG 545
>sp|Q62888|NLGN2_RAT Neuroligin-2 OS=Rattus norvegicus GN=Nlgn2 PE=1 SV=1
Length = 836
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 31/52 (59%)
Query: 23 ETDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
E + G+E+PY GVP+ G + ++ + + S V++T+ +NFA++G
Sbjct: 494 EWADAAHGDELPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTG 545
>sp|Q69ZK9|NLGN2_MOUSE Neuroligin-2 OS=Mus musculus GN=Nlgn2 PE=1 SV=2
Length = 836
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 31/52 (59%)
Query: 23 ETDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
E + G+E+PY GVP+ G + ++ + + S V++T+ +NFA++G
Sbjct: 494 EWADAAHGDELPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTG 545
>sp|Q9XTG1|NLGN1_CAEEL Neuroligin-1 OS=Caenorhabditis elegans GN=nlg-1 PE=1 SV=1
Length = 798
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 27 SVSGEEVPYFLGVPL---DGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
S+SG+ VPY G PL D + Y S + T +K S+V++ +VSNF +SG
Sbjct: 488 SLSGDIVPYIFGYPLAQGDSEERLY-SGFNTDDKGISKVMMHYVSNFVKSG 537
>sp|B0F2B4|NLGN4_MOUSE Neuroligin 4-like OS=Mus musculus GN=Nlgn4l PE=1 SV=1
Length = 945
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 27 SVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
+ G+EVPY GV + G + ++ + + S V++T+ +NFA++G
Sbjct: 560 AAHGDEVPYVFGVHMAGPGDVFGCNFSRNDVMLSAVVMTYWTNFAKTG 607
>sp|P21836|ACES_MOUSE Acetylcholinesterase OS=Mus musculus GN=Ache PE=1 SV=1
Length = 614
Score = 37.4 bits (85), Expect = 0.026, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Query: 30 GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
G E+ + G+PLD L+Y TT E++ ++ ++ + +NFAR+G
Sbjct: 479 GYEIEFIFGLPLDPSLNY-----TTEERIFAQRLMKYWTNFARTG 518
>sp|P37136|ACES_RAT Acetylcholinesterase OS=Rattus norvegicus GN=Ache PE=2 SV=1
Length = 614
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 30 GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
G E+ + G+PLD L+Y T E++ ++ ++ + +NFAR+G
Sbjct: 479 GYEIEFIFGLPLDPSLNY-----TVEERIFAQRLMQYWTNFARTG 518
>sp|P22303|ACES_HUMAN Acetylcholinesterase OS=Homo sapiens GN=ACHE PE=1 SV=1
Length = 614
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 30 GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
G E+ + G+PLD YT EK+ ++ ++ + +NFAR+G
Sbjct: 479 GYEIEFIFGIPLDP-----SRNYTAEEKIFAQRLMRYWANFARTG 518
>sp|O62763|ACES_FELCA Acetylcholinesterase OS=Felis catus GN=ACHE PE=3 SV=1
Length = 611
Score = 33.5 bits (75), Expect = 0.40, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 30 GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
G E+ + G+PL+ L+Y T E++ ++ ++ + +NFAR+G
Sbjct: 476 GYEIEFIFGLPLEPSLNY-----TAEERIFAQRLMRYWANFARTG 515
>sp|Q29499|ACES_RABIT Acetylcholinesterase (Fragment) OS=Oryctolagus cuniculus GN=ACHE
PE=2 SV=1
Length = 584
Score = 33.1 bits (74), Expect = 0.51, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 30 GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
G E+ + G+PL+ L+Y T E++ ++ ++ + +NFAR+G
Sbjct: 449 GYEIEFIFGLPLEPSLNY-----TEEERIFAQRLMRYWANFARTG 488
>sp|Q869C3|ACES_ANOGA Acetylcholinesterase OS=Anopheles gambiae GN=Ace PE=3 SV=3
Length = 737
Score = 32.7 bits (73), Expect = 0.67, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 30 GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
G+E+ Y G PL+ L Y T EK S I+ + SNFA++G
Sbjct: 601 GDEINYVFGEPLNPTLGY-----TEDEKDFSRKIMRYWSNFAKTG 640
>sp|Q9NDG8|ACE4_CAEBR Acetylcholinesterase 4 OS=Caenorhabditis briggsae GN=ace-4 PE=2
SV=1
Length = 604
Score = 32.7 bits (73), Expect = 0.69, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 27 SVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
++ G E+ Y GVPL Y Y RE++ S I+ + ++FA++G
Sbjct: 475 AMHGYEIEYVFGVPLS-----YSKIYKRREQIFSRKIMQFWASFAKNG 517
>sp|Q92035|ACES_BUNFA Acetylcholinesterase OS=Bungarus fasciatus GN=ACHE PE=1 SV=2
Length = 606
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 30 GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
G E+ + G+PL+ L+Y T +EK S ++ + +NFAR+G
Sbjct: 472 GYEIEFVFGLPLNDSLNY-----TPQEKELSRRMMRYWANFARTG 511
>sp|P23795|ACES_BOVIN Acetylcholinesterase OS=Bos taurus GN=ACHE PE=1 SV=2
Length = 613
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 30 GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
G E+ + G+PL+ L+ YT E+ ++ ++ + +NFAR+G
Sbjct: 478 GYEIEFIFGLPLEPSLN-----YTIEERTFAQRLMRYWANFARTG 517
>sp|Q9DDE3|ACES_DANRE Acetylcholinesterase OS=Danio rerio GN=ache PE=2 SV=1
Length = 634
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Query: 28 VSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
+ G E+ + G+PL+ L+Y T E+ S I+ + +NFAR+G
Sbjct: 494 IHGYEIEFVFGLPLEKRLNY-----TAEEEKLSRRIMRYWANFARTG 535
>sp|P56161|ACES_ANOST Acetylcholinesterase OS=Anopheles stephensi PE=3 SV=1
Length = 664
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 30 GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
G+EV Y G P++ L +Y RE+ S ++ VS FAR+G
Sbjct: 505 GDEVEYIFGQPMNASL-----QYRQRERDLSRRMVLSVSEFARTG 544
>sp|Q5GRG2|EST5A_RAT Carboxylesterase 5A OS=Rattus norvegicus GN=Ces5a PE=1 SV=1
Length = 575
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 31 EEVPYFLGVP-LDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
+E+ + G P L+GD+ ++ T EKL S ++++ +NFARSG
Sbjct: 456 DEIRFVFGGPFLEGDVVMFEEA-TEDEKLLSRKMMSYWANFARSG 499
>sp|P01267|THYG_BOVIN Thyroglobulin OS=Bos taurus GN=TG PE=1 SV=1
Length = 2769
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 2 IVDENSH-HLTCGGIIYLFCPLETDQSVSGE---EVPYFLGVPLDGDLSYYKSKYTTREK 57
++D SH T G ++++ E+ S E +V Y G+P Y+ ++T EK
Sbjct: 2594 VIDMASHWARTVRGNVFMYHAPESYSHSSLELLTDVLYAFGLPF---YPAYEGQFTLEEK 2650
Query: 58 LHSEVILTWVSNFARSG 74
S I+ + SNF RSG
Sbjct: 2651 SLSLKIMQYFSNFIRSG 2667
>sp|O08710|THYG_MOUSE Thyroglobulin OS=Mus musculus GN=Tg PE=1 SV=3
Length = 2766
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 32 EVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
+V Y G+P S Y+ +++T E+ S ++ + SNF RSG
Sbjct: 2626 DVQYAFGLPF---YSAYQGQFSTEEQSLSLKVMQYFSNFIRSG 2665
>sp|Q8CI03|FWCH1_MOUSE FLYWCH-type zinc finger-containing protein 1 OS=Mus musculus
GN=Flywch1 PE=2 SV=2
Length = 673
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 21 PLETDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
P E DQ V P FL PL G+ Y+S REK+ E + + AR G
Sbjct: 388 PPEEDQDVDPRG-PEFLKTPLGGNFLVYESFLYRREKVAGEKVYWTCRDQARMG 440
>sp|O42275|ACES_ELEEL Acetylcholinesterase OS=Electrophorus electricus GN=ache PE=3 SV=1
Length = 633
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Query: 28 VSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
+ G E+ + G+PL+ L+ YT E+ S ++ + +NFAR+G
Sbjct: 493 IHGYEIEFVFGLPLEKRLN-----YTLEEEKLSRRMMKYWANFARTG 534
>sp|Q86GC8|ACES_CULPI Acetylcholinesterase OS=Culex pipiens GN=ACHE1 PE=2 SV=2
Length = 702
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 30 GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
G+E+ Y G PL+ L Y EK S I+ + SNFA++G
Sbjct: 568 GDEINYVFGEPLNSALGYQDD-----EKDFSRKIMRYWSNFAKTG 607
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,588,504
Number of Sequences: 539616
Number of extensions: 1089704
Number of successful extensions: 1822
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1799
Number of HSP's gapped (non-prelim): 32
length of query: 74
length of database: 191,569,459
effective HSP length: 45
effective length of query: 29
effective length of database: 167,286,739
effective search space: 4851315431
effective search space used: 4851315431
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)