RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13955
(74 letters)
>d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId:
5061]}
Length = 517
Score = 37.5 bits (85), Expect = 4e-05
Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Query: 30 GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
E+P G G LS S Y T V + + +F ++
Sbjct: 420 TFELPAIFGAGSTGTLSSDSS-YLTYNAAIIPVTMHYFISFVQTL 463
>d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 542
Score = 37.0 bits (84), Expect = 5e-05
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Query: 30 GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
G E+ + G+PLD L+Y TT E++ ++ ++ + +NFAR+G
Sbjct: 448 GYEIEFIFGLPLDPSLNY-----TTEERIFAQRLMKYWTNFARTG 487
>d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 571
Score = 35.9 bits (81), Expect = 1e-04
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 30 GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
G+E+ YF G PL+ L +Y E+ + +L+ V FA++G
Sbjct: 479 GDEIEYFFGQPLNNSL-----QYRPVERELGKRMLSAVIEFAKTG 518
>d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB
esterase) {Bacillus subtilis [TaxId: 1423]}
Length = 483
Score = 35.8 bits (81), Expect = 1e-04
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 30 GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
E+P+ G LDG K++ T K S I + FA++G
Sbjct: 399 ALELPFVFG-NLDGLERMAKAEITDEVKQLSHTIQSAWITFAKTG 442
>d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray
(Torpedo californica) [TaxId: 7787]}
Length = 532
Score = 35.5 bits (80), Expect = 2e-04
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 30 GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
G E+ + G+PL +L+Y T E+ S I+ + + FA++G
Sbjct: 438 GYEIEFVFGLPLVKELNY-----TAEEEALSRRIMHYWATFAKTG 477
>d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 526
Score = 34.7 bits (78), Expect = 4e-04
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 30 GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
G E+ + G+PL+ + +YT E++ S I+ +NFA+ G
Sbjct: 436 GYEIEFVFGLPLE-----RRDQYTKAEEILSRSIVKRWANFAKYG 475
>d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol
esterase) {Cow (Bos taurus) [TaxId: 9913]}
Length = 579
Score = 34.2 bits (77), Expect = 6e-04
Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 30 GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
+++ Y G P L Y +++ S+ ++ + +NFAR+G
Sbjct: 436 ADDLQYVFGKPFATPLGY-----RAQDRTVSKAMIAYWTNFARTG 475
>d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver
carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]}
Length = 532
Score = 32.4 bits (72), Expect = 0.003
Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 30 GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
G+E+ G P + K + E S++++ + +NFAR+G
Sbjct: 448 GDELFSVFGAP------FLKEGASEEEIRLSKMVMKFWANFARNG 486
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress
(Arabidopsis thaliana), peroxidase N [TaxId: 3702]}
Length = 300
Score = 23.5 bits (50), Expect = 3.1
Identities = 15/66 (22%), Positives = 23/66 (34%), Gaps = 14/66 (21%)
Query: 20 CPLETDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVIL-----------TWVS 68
CPL + S P D +Y+K+ + L S+ IL V
Sbjct: 204 CPLGGN---SNITAPLDRSTTDTFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKKLVE 260
Query: 69 NFARSG 74
++RS
Sbjct: 261 AYSRSQ 266
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max)
[TaxId: 3847]}
Length = 304
Score = 23.5 bits (50), Expect = 3.2
Identities = 10/50 (20%), Positives = 16/50 (32%), Gaps = 9/50 (18%)
Query: 33 VPYFLGVPLDGDLSYYKSKYTTREKLHSEVILT---------WVSNFARS 73
L P D YY + L S+ L V++F+ +
Sbjct: 218 TNLDLSTPDQFDNRYYSNLLQLNGLLQSDQELFSTPGADTIPIVNSFSSN 267
>d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus
(Geotrichum candidum), ATCC 34614 [TaxId: 27317]}
Length = 544
Score = 23.2 bits (48), Expect = 3.9
Identities = 6/45 (13%), Positives = 12/45 (26%), Gaps = 16/45 (35%)
Query: 30 GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 74
G E+ + V + + L + +FA
Sbjct: 464 GNELIFQFNVNIGP----------------ANSYLRYFISFANHH 492
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.138 0.424
Gapped
Lambda K H
0.267 0.0393 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 276,637
Number of extensions: 9816
Number of successful extensions: 36
Number of sequences better than 10.0: 1
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 11
Length of query: 74
Length of database: 2,407,596
Length adjustment: 41
Effective length of query: 33
Effective length of database: 1,844,666
Effective search space: 60873978
Effective search space used: 60873978
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.8 bits)