Query psy13956
Match_columns 83
No_of_seqs 156 out of 1027
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 15:54:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13956.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13956hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bix_A Neuroligin-1, neuroligi 99.8 3.2E-20 1.1E-24 130.7 8.2 77 3-83 424-500 (574)
2 1p0i_A Cholinesterase; serine 99.8 6.6E-20 2.3E-24 128.0 6.6 73 2-83 406-478 (529)
3 1ea5_A ACHE, acetylcholinester 99.8 8.4E-20 2.9E-24 127.7 6.7 73 2-83 408-480 (537)
4 2ha2_A ACHE, acetylcholinester 99.8 7.5E-20 2.6E-24 128.1 5.9 73 2-83 415-487 (543)
5 2h7c_A Liver carboxylesterase 99.8 1.6E-19 5.6E-24 126.3 7.4 74 2-83 415-488 (542)
6 1dx4_A ACHE, acetylcholinester 99.8 1.7E-19 5.9E-24 127.2 6.0 73 2-83 448-520 (585)
7 2bce_A Cholesterol esterase; h 99.8 2.2E-19 7.4E-24 126.8 5.6 67 8-83 409-475 (579)
8 2fj0_A JuvenIle hormone estera 99.7 5.2E-18 1.8E-22 119.0 6.7 80 3-83 412-493 (551)
9 2ogt_A Thermostable carboxyles 99.7 7.6E-18 2.6E-22 116.9 6.2 74 3-83 380-453 (498)
10 1qe3_A PNB esterase, para-nitr 99.7 1.6E-17 5.6E-22 115.1 6.8 72 3-83 372-443 (489)
11 1ukc_A ESTA, esterase; fungi, 99.7 3.9E-18 1.3E-22 119.0 0.6 75 3-83 393-468 (522)
12 1thg_A Lipase; hydrolase(carbo 99.5 3.4E-15 1.2E-19 104.7 4.6 52 9-83 441-492 (544)
13 1llf_A Lipase 3; candida cylin 99.4 2.9E-14 9.9E-19 99.8 3.3 51 9-83 428-478 (534)
14 1nwd_B GAD, glutamate decarbox 74.9 3.6 0.00012 16.9 2.4 17 65-81 7-23 (28)
15 2ad6_B Methanol dehydrogenase 39.4 22 0.00076 18.0 2.1 17 67-83 46-62 (69)
16 3c0t_B Mediator of RNA polymer 39.4 20 0.00067 15.2 1.6 15 69-83 6-20 (33)
17 1w6s_B Methanol dehydrogenase 36.3 26 0.0009 18.0 2.1 17 67-83 46-62 (74)
18 1lrw_B Methanol dehydrogenase 33.1 31 0.0011 18.1 2.1 17 67-83 46-62 (83)
19 1z8u_A Alpha-hemoglobin stabil 32.1 48 0.0016 18.0 2.8 15 62-79 33-47 (102)
20 2v6u_A Pterin-4A-carbinolamine 24.4 40 0.0014 18.3 1.7 23 59-81 82-104 (104)
21 2ftx_A Hypothetical 25.2 kDa p 24.1 26 0.0009 18.9 0.8 15 35-49 21-35 (90)
22 3iz6_S 40S ribosomal protein S 23.3 18 0.00062 21.3 0.1 8 76-83 36-43 (146)
23 2xzm_T RPS19E; ribosome, trans 21.5 26 0.00089 20.9 0.5 9 75-83 36-44 (155)
24 3lqb_A Hatching enzyme, LOC792 21.3 1.3E+02 0.0046 18.2 3.8 36 32-78 11-47 (199)
25 3u5c_T 40S ribosomal protein S 21.2 17 0.00058 21.4 -0.3 17 67-83 17-40 (144)
26 1yod_A Water-solublized phosph 20.8 63 0.0022 13.5 1.7 12 69-80 4-15 (30)
No 1
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=99.82 E-value=3.2e-20 Score=130.70 Aligned_cols=77 Identities=26% Similarity=0.543 Sum_probs=58.6
Q ss_pred hHhhhcCCCeEEEEecCCCCcCcCCCCCCCCCCCCCCCCchhhcCCcCCCCCCCcCCCCCHHHHHHHHHHHHHHHhhhcc
Q psy13956 3 KAQKRLGSRTAVVDNNSNTEKRRKNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARS 82 (83)
Q Consensus 3 ~~~~~~~~~~y~Y~f~~~~~~~~~~~~~~~~~Ga~H~~dl~yvF~~~~~~~~~~~~~~~~~~d~~~s~~m~~~w~nFAkt 82 (83)
+++.+.+.|||+|+|+|... ....+.+.||+|++||+||||.+...........++++|++|+++|+++|+||||+
T Consensus 424 ~~~~~~~~pvy~Y~F~~~~~----~~~~~~~~Ga~H~~el~yvFg~~~~~~~~~~~~~~~~~d~~ls~~m~~~W~nFAkt 499 (574)
T 3bix_A 424 DLHSNFGSPTYFYAFYHHCQ----TDQVPAWADAAHGDEVPYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKT 499 (574)
T ss_dssp HHHHHTTCCEEEEEECCCCC----CTTSCTTCCSCTTTTHHHHTTGGGGCCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCeEEEEEeccCC----cCCCCCCCCCcCccchHHHcCCCcccccccccCCCChHHHHHHHHHHHHHHHHhCc
Confidence 45566678999999999432 12234578999999999999987543211123356899999999999999999999
Q ss_pred C
Q psy13956 83 G 83 (83)
Q Consensus 83 G 83 (83)
|
T Consensus 500 G 500 (574)
T 3bix_A 500 G 500 (574)
T ss_dssp S
T ss_pred C
Confidence 7
No 2
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=99.80 E-value=6.6e-20 Score=127.95 Aligned_cols=73 Identities=23% Similarity=0.374 Sum_probs=57.0
Q ss_pred hhHhhhcCCCeEEEEecCCCCcCcCCCCCCCCCCCCCCCCchhhcCCcCCCCCCCcCCCCCHHHHHHHHHHHHHHHhhhc
Q psy13956 2 LKAQKRLGSRTAVVDNNSNTEKRRKNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFAR 81 (83)
Q Consensus 2 ~~~~~~~~~~~y~Y~f~~~~~~~~~~~~~~~~~Ga~H~~dl~yvF~~~~~~~~~~~~~~~~~~d~~~s~~m~~~w~nFAk 81 (83)
++++.+.+.|||+|+|+|... ....+.+.||+|++||+||||.+... ...++++|++|+++|+++|+||||
T Consensus 406 a~~~~~~g~~vy~Y~F~~~~~----~~~~~~~~Ga~H~~el~yvFg~~~~~-----~~~~t~~~~~ls~~m~~~W~nFak 476 (529)
T 1p0i_A 406 TKKFSEWGNNAFFYYFEHRSS----KLPWPEWMGVMHGYEIEFVFGLPLER-----RDQYTKAEEILSRSIVKRWANFAK 476 (529)
T ss_dssp HHHHHTTTCCEEEEEECCCCT----TCCSCGGGCSBTTTTHHHHTTGGGCT-----TC-CCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCeEEEEEeccCC----CCCCccccCcCccchhHHhcCCCccc-----cCCCCHHHHHHHHHHHHHHHHHhc
Confidence 345556678999999999543 12234568999999999999986542 234589999999999999999999
Q ss_pred cC
Q psy13956 82 SG 83 (83)
Q Consensus 82 tG 83 (83)
+|
T Consensus 477 tG 478 (529)
T 1p0i_A 477 YG 478 (529)
T ss_dssp HS
T ss_pred cC
Confidence 97
No 3
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=99.80 E-value=8.4e-20 Score=127.73 Aligned_cols=73 Identities=25% Similarity=0.397 Sum_probs=57.5
Q ss_pred hhHhhhcCCCeEEEEecCCCCcCcCCCCCCCCCCCCCCCCchhhcCCcCCCCCCCcCCCCCHHHHHHHHHHHHHHHhhhc
Q psy13956 2 LKAQKRLGSRTAVVDNNSNTEKRRKNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFAR 81 (83)
Q Consensus 2 ~~~~~~~~~~~y~Y~f~~~~~~~~~~~~~~~~~Ga~H~~dl~yvF~~~~~~~~~~~~~~~~~~d~~~s~~m~~~w~nFAk 81 (83)
++++.+.+.|||+|+|+|.+. ....+.+.||+|++||+||||.+... ...++++|++|+++|+++|+||||
T Consensus 408 a~~~a~~g~~vy~Y~F~~~~~----~~~~~~~~Ga~H~~el~yvFg~~~~~-----~~~~~~~d~~ls~~m~~~W~nFak 478 (537)
T 1ea5_A 408 VNKYTKFGNGTYLYFFNHRAS----NLVWPEWMGVIHGYEIEFVFGLPLVK-----ELNYTAEEEALSRRIMHYWATFAK 478 (537)
T ss_dssp HHHHHTTSSCEEEEEECCCCT----TCCSCGGGCSBTTTTHHHHTTGGGCG-----GGCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCcEEEEEecCCC----CCCCCCcCCccchhhhHHHcCCcccc-----ccCCChHHHHHHHHHHHHHHHhcc
Confidence 345556678999999999543 12234568999999999999986542 234589999999999999999999
Q ss_pred cC
Q psy13956 82 SG 83 (83)
Q Consensus 82 tG 83 (83)
+|
T Consensus 479 tG 480 (537)
T 1ea5_A 479 TG 480 (537)
T ss_dssp HS
T ss_pred cC
Confidence 97
No 4
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=99.79 E-value=7.5e-20 Score=128.05 Aligned_cols=73 Identities=25% Similarity=0.391 Sum_probs=57.5
Q ss_pred hhHhhhcCCCeEEEEecCCCCcCcCCCCCCCCCCCCCCCCchhhcCCcCCCCCCCcCCCCCHHHHHHHHHHHHHHHhhhc
Q psy13956 2 LKAQKRLGSRTAVVDNNSNTEKRRKNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFAR 81 (83)
Q Consensus 2 ~~~~~~~~~~~y~Y~f~~~~~~~~~~~~~~~~~Ga~H~~dl~yvF~~~~~~~~~~~~~~~~~~d~~~s~~m~~~w~nFAk 81 (83)
++++.+.+.|||+|+|+|... ....+.+.||+|++||+||||.+... ...++++|++|+++|+++|+||||
T Consensus 415 a~~~~~~g~~vy~Y~F~~~~~----~~~~~~~~Ga~H~~el~yvFg~~~~~-----~~~~t~~~~~ls~~m~~~W~nFak 485 (543)
T 2ha2_A 415 AGRLAAQGARVYAYIFEHRAS----TLTWPLWMGVPHGYEIEFIFGLPLDP-----SLNYTTEERIFAQRLMKYWTNFAR 485 (543)
T ss_dssp HHHHHHTTCEEEEEEECCCCT----TCCSCGGGCSBTTTTHHHHTTGGGCG-----GGCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCeEEEEecCCCC----cCCCccccCccccchhhHhhCCcccc-----cCCCCHHHHHHHHHHHHHHHHHhh
Confidence 345566678999999999543 12234568999999999999986531 234589999999999999999999
Q ss_pred cC
Q psy13956 82 SG 83 (83)
Q Consensus 82 tG 83 (83)
+|
T Consensus 486 tG 487 (543)
T 2ha2_A 486 TG 487 (543)
T ss_dssp HS
T ss_pred cC
Confidence 97
No 5
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=99.79 E-value=1.6e-19 Score=126.33 Aligned_cols=74 Identities=24% Similarity=0.344 Sum_probs=57.7
Q ss_pred hhHhhhcCCCeEEEEecCCCCcCcCCCCCCCCCCCCCCCCchhhcCCcCCCCCCCcCCCCCHHHHHHHHHHHHHHHhhhc
Q psy13956 2 LKAQKRLGSRTAVVDNNSNTEKRRKNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFAR 81 (83)
Q Consensus 2 ~~~~~~~~~~~y~Y~f~~~~~~~~~~~~~~~~~Ga~H~~dl~yvF~~~~~~~~~~~~~~~~~~d~~~s~~m~~~w~nFAk 81 (83)
++++.+.+.|||+|+|+|.+... ....+.+.||+|++||+||||++.. ...++++|++|+++|+++|+||||
T Consensus 415 a~~~~~~~~~vy~Y~F~~~~~~~--~~~~~~~~Ga~H~~el~yvFg~~~~------~~~~~~~~~~ls~~m~~~W~nFak 486 (542)
T 2h7c_A 415 ARNHRDAGAPTYMYEFQYRPSFS--SDMKPKTVIGDHGDELFSVFGAPFL------KEGASEEEIRLSKMVMKFWANFAR 486 (542)
T ss_dssp HHHHHHTTSCEEEEEEECCCTTS--CTTSCTTCCSBTTTTHHHHTTGGGT------SSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCeeEEEEeccCccc--cccCCCCCCcccccchHHhhCCccc------cCCCCcHHHHHHHHHHHHHHHHHh
Confidence 34555577899999999954321 1123457899999999999998753 134589999999999999999999
Q ss_pred cC
Q psy13956 82 SG 83 (83)
Q Consensus 82 tG 83 (83)
+|
T Consensus 487 tG 488 (542)
T 2h7c_A 487 NG 488 (542)
T ss_dssp HS
T ss_pred hC
Confidence 97
No 6
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=99.78 E-value=1.7e-19 Score=127.21 Aligned_cols=73 Identities=23% Similarity=0.343 Sum_probs=57.3
Q ss_pred hhHhhhcCCCeEEEEecCCCCcCcCCCCCCCCCCCCCCCCchhhcCCcCCCCCCCcCCCCCHHHHHHHHHHHHHHHhhhc
Q psy13956 2 LKAQKRLGSRTAVVDNNSNTEKRRKNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFAR 81 (83)
Q Consensus 2 ~~~~~~~~~~~y~Y~f~~~~~~~~~~~~~~~~~Ga~H~~dl~yvF~~~~~~~~~~~~~~~~~~d~~~s~~m~~~w~nFAk 81 (83)
++++.+.+.|||+|+|+|... ....+.+.||+|++||+||||.+... ...++++|++|+++|+++|+||||
T Consensus 448 a~~~a~~g~~vy~Y~F~~~~~----~~~~~~~~Ga~H~~el~yvFg~~~~~-----~~~~~~~e~~ls~~m~~~W~nFAk 518 (585)
T 1dx4_A 448 AQALAERGASVHYYYFTHRTS----TSLWGEWMGVLHGDEIEYFFGQPLNN-----SLQYRPVERELGKRMLSAVIEFAK 518 (585)
T ss_dssp HHHHHHTTCEEEEEEECCCCT----TCCSCGGGCSBTTHHHHHHTTGGGCT-----TSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCceEEEEEeccCC----cccCCCccCccccCccHHhcCCcccc-----cCCCCcHHHHHHHHHHHHHHHHhc
Confidence 345566778999999999432 12224567999999999999986532 234588999999999999999999
Q ss_pred cC
Q psy13956 82 SG 83 (83)
Q Consensus 82 tG 83 (83)
+|
T Consensus 519 tG 520 (585)
T 1dx4_A 519 TG 520 (585)
T ss_dssp HS
T ss_pred cC
Confidence 97
No 7
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=99.77 E-value=2.2e-19 Score=126.76 Aligned_cols=67 Identities=19% Similarity=0.331 Sum_probs=53.6
Q ss_pred cCCCeEEEEecCCCCcCcCCCCCCCCCCCCCCCCchhhcCCcCCCCCCCcCCCCCHHHHHHHHHHHHHHHhhhccC
Q psy13956 8 LGSRTAVVDNNSNTEKRRKNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 83 (83)
Q Consensus 8 ~~~~~y~Y~f~~~~~~~~~~~~~~~~~Ga~H~~dl~yvF~~~~~~~~~~~~~~~~~~d~~~s~~m~~~w~nFAktG 83 (83)
.+.|||+|+|+|.+.. ...+.+.||+|++||+||||.+... +..++++|++|+++|+++|+||||+|
T Consensus 409 ~~~~vY~Y~F~~~~~~----~~~~~~~Ga~H~~El~yvFg~~~~~-----~~~~~~~d~~ls~~m~~~W~nFAktG 475 (579)
T 2bce_A 409 KSANTYTYLFSQPSRM----PIYPKWMGADHADDLQYVFGKPFAT-----PLGYRAQDRTVSKAMIAYWTNFARTG 475 (579)
T ss_dssp SSCCEEEEEECCCCCC----SSSCTTCCCBTTTTHHHHTTHHHHS-----GGGCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCceEEEEEccCCCC----CCCccccccchhhHHHHHhCCcccc-----cCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 4679999999994321 1235678999999999999986532 12358899999999999999999997
No 8
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=99.73 E-value=5.2e-18 Score=119.00 Aligned_cols=80 Identities=8% Similarity=0.006 Sum_probs=55.5
Q ss_pred hHhhh-cCCCeEEEEecCCCCcCcCCC-CCCCCCCCCCCCCchhhcCCcCCCCCCCcCCCCCHHHHHHHHHHHHHHHhhh
Q psy13956 3 KAQKR-LGSRTAVVDNNSNTEKRRKNT-RKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFA 80 (83)
Q Consensus 3 ~~~~~-~~~~~y~Y~f~~~~~~~~~~~-~~~~~~Ga~H~~dl~yvF~~~~~~~~~~~~~~~~~~d~~~s~~m~~~w~nFA 80 (83)
+++.+ .+.|||+|+|+|.+....... ..+.+.||+|++||+||||++..... ......+++|++|+++|+++|+|||
T Consensus 412 ~~~a~~~~~~vy~Y~F~~~~~~~~~~~~~~~~~~Ga~H~~el~yvFg~~~~~~~-~~~~~~~~~d~~ls~~m~~~W~nFA 490 (551)
T 2fj0_A 412 IKRARSNGAPVYLYQFSFDGDYSVFREVNHLNFEGAGHIEDLTYVFRTNSMLGG-HASFPPHDKDDHMKYWMTSFITNFM 490 (551)
T ss_dssp HHHHTSSCSCEEEEEECCCCSCCHHHHHHTCCCSSCCTTTGGGGTSBCTTTCCS-CCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCeEEEEEeecCCcccccccCCCCCCCcccccceeeecCCchhccc-ccCCCCChHHHHHHHHHHHHHHHHH
Confidence 34444 368999999999654221000 01346799999999999998654100 0012347789999999999999999
Q ss_pred ccC
Q psy13956 81 RSG 83 (83)
Q Consensus 81 ktG 83 (83)
|+|
T Consensus 491 ktG 493 (551)
T 2fj0_A 491 KYS 493 (551)
T ss_dssp HHS
T ss_pred hhC
Confidence 997
No 9
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=99.72 E-value=7.6e-18 Score=116.94 Aligned_cols=74 Identities=14% Similarity=0.077 Sum_probs=50.3
Q ss_pred hHhhhcCCCeEEEEecCCCCcCcCCCCCCCCCCCCCCCCchhhcCCcCCCCCCCcCCCCCHHHHHHHHHHHHHHHhhhcc
Q psy13956 3 KAQKRLGSRTAVVDNNSNTEKRRKNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARS 82 (83)
Q Consensus 3 ~~~~~~~~~~y~Y~f~~~~~~~~~~~~~~~~~Ga~H~~dl~yvF~~~~~~~~~~~~~~~~~~d~~~s~~m~~~w~nFAkt 82 (83)
+++.+.+.|||+|+|+|.... . ....||+|++||+||||++....... ....+++|++|+++|+++|+||||+
T Consensus 380 ~~~~~~~~~vy~Y~F~~~~~~----~--~~~~Ga~H~~el~yvFg~~~~~~~~~-~~~~~~~d~~ls~~m~~~w~nFak~ 452 (498)
T 2ogt_A 380 DAQAAQGADVYMYRFDYETPV----F--GGQLKACHALELPFVFHNLHQPGVAN-FVGNRPEREAIANEMHYAWLSFART 452 (498)
T ss_dssp HHHHHTTCCEEEEEECCCCCC-------------CCCCCHHHHHTCTTSTTSCC-CSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCeEEEEEccCCCc----c--CCCCCcccccchhhhcCCcccccccc-ccCCCHHHHHHHHHHHHHHHHHhcc
Confidence 455566789999999994321 1 23479999999999999865310000 0123678999999999999999999
Q ss_pred C
Q psy13956 83 G 83 (83)
Q Consensus 83 G 83 (83)
|
T Consensus 453 G 453 (498)
T 2ogt_A 453 G 453 (498)
T ss_dssp S
T ss_pred C
Confidence 7
No 10
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.71 E-value=1.6e-17 Score=115.07 Aligned_cols=72 Identities=22% Similarity=0.213 Sum_probs=51.3
Q ss_pred hHhhhcCCCeEEEEecCCCCcCcCCCCCCCCCCCCCCCCchhhcCCcCCCCCCCcCCCCCHHHHHHHHHHHHHHHhhhcc
Q psy13956 3 KAQKRLGSRTAVVDNNSNTEKRRKNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARS 82 (83)
Q Consensus 3 ~~~~~~~~~~y~Y~f~~~~~~~~~~~~~~~~~Ga~H~~dl~yvF~~~~~~~~~~~~~~~~~~d~~~s~~m~~~w~nFAkt 82 (83)
+++.+ +.|||+|+|+|.++. +...||+|++||+||||++...... .....+++|++|+++|+++|+||||+
T Consensus 372 ~~~~~-~~~vy~Y~F~~~~~~-------~~~~ga~H~~dl~yvFg~~~~~~~~-~~~~~~~~~~~ls~~m~~~w~~Fa~~ 442 (489)
T 1qe3_A 372 SAQSH-YAPVWMYRFDWHPEK-------PPYNKAFHALELPFVFGNLDGLERM-AKAEITDEVKQLSHTIQSAWITFAKT 442 (489)
T ss_dssp HHHTT-TSCEEEEEECCCCSS-------TTSCSCCTTTTHHHHHTCCTTC--------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcc-CCCeEEEEEecCCCC-------CCCCCCccccchhhhcCCccccccc-cccCCCHHHHHHHHHHHHHHHHHhcc
Confidence 34444 789999999994311 1122999999999999986531000 00124788999999999999999999
Q ss_pred C
Q psy13956 83 G 83 (83)
Q Consensus 83 G 83 (83)
|
T Consensus 443 G 443 (489)
T 1qe3_A 443 G 443 (489)
T ss_dssp S
T ss_pred C
Confidence 7
No 11
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=99.68 E-value=3.9e-18 Score=118.98 Aligned_cols=75 Identities=17% Similarity=0.096 Sum_probs=53.3
Q ss_pred hHhhhcC-CCeEEEEecCCCCcCcCCCCCCCCCCCCCCCCchhhcCCcCCCCCCCcCCCCCHHHHHHHHHHHHHHHhhhc
Q psy13956 3 KAQKRLG-SRTAVVDNNSNTEKRRKNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFAR 81 (83)
Q Consensus 3 ~~~~~~~-~~~y~Y~f~~~~~~~~~~~~~~~~~Ga~H~~dl~yvF~~~~~~~~~~~~~~~~~~d~~~s~~m~~~w~nFAk 81 (83)
+++.+.+ .|||+|+|++...... ....||+|++||+||||++..... ..+..++++|++|+++|+++|+||||
T Consensus 393 ~~~a~~~~~~vy~Y~F~~~~~~~~-----~~~~Ga~H~~el~yvFg~~~~~~~-~~~~~~~~~d~~ls~~m~~~W~nFak 466 (522)
T 1ukc_A 393 SSAARYLPNSVWNYRVNIIDESNI-----AGGIGVPHTFELPAIFGAGSTGTL-SSDSSYLTYNAAIIPVTMHYFISFVQ 466 (522)
T ss_dssp HHHHHHCGGGEEEEEECCCCHHHH-----HTTCCSBTTTTHHHHHCTTTTSCC-CTTCGGGTTTTTHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCceEEEEEccCCCccc-----cCCCCCcchhhHHHhcCCcccccc-cCccCCChHHHHHHHHHHHHHHHHhh
Confidence 4455556 7999999999432110 135799999999999998653210 01122345688999999999999999
Q ss_pred cC
Q psy13956 82 SG 83 (83)
Q Consensus 82 tG 83 (83)
+|
T Consensus 467 tG 468 (522)
T 1ukc_A 467 TL 468 (522)
T ss_dssp HS
T ss_pred hC
Confidence 87
No 12
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=99.54 E-value=3.4e-15 Score=104.68 Aligned_cols=52 Identities=12% Similarity=0.026 Sum_probs=42.7
Q ss_pred CCCeEEEEecCCCCcCcCCCCCCCCCCCCCCCCchhhcCCcCCCCCCCcCCCCCHHHHHHHHHHHHHHHhhhccC
Q psy13956 9 GSRTAVVDNNSNTEKRRKNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 83 (83)
Q Consensus 9 ~~~~y~Y~f~~~~~~~~~~~~~~~~~Ga~H~~dl~yvF~~~~~~~~~~~~~~~~~~d~~~s~~m~~~w~nFAktG 83 (83)
+.|||+|+|+|... . ..+.||+|++||+|||+.+ .+|+++|+++|+||||+|
T Consensus 441 ~~~~y~Y~f~~~~~----~---~~~~Ga~H~~el~yvF~~~----------------~~ls~~m~~~w~~Fa~tG 492 (544)
T 1thg_A 441 DVNRWTYLSTHLHN----L---VPFLGTFHGNELIFQFNVN----------------IGPANSYLRYFISFANHH 492 (544)
T ss_dssp TSCEEEEEECTTTT----T---STTTSSBTTTTHHHHHTCC----------------CTTHHHHHHHHHHHHHHS
T ss_pred CCCceEEEEecCCC----C---CCCCCceecccHHHHhcCH----------------HHHHHHHHHHHHHHHhhC
Confidence 77999999999432 1 2467999999999999532 168999999999999987
No 13
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=99.45 E-value=2.9e-14 Score=99.79 Aligned_cols=51 Identities=8% Similarity=-0.104 Sum_probs=41.1
Q ss_pred CCCeEEEEecCCCCcCcCCCCCCCCCCCCCCCCchhhcCCcCCCCCCCcCCCCCHHHHHHHHHHHHHHHhhhccC
Q psy13956 9 GSRTAVVDNNSNTEKRRKNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 83 (83)
Q Consensus 9 ~~~~y~Y~f~~~~~~~~~~~~~~~~~Ga~H~~dl~yvF~~~~~~~~~~~~~~~~~~d~~~s~~m~~~w~nFAktG 83 (83)
+.|||+|+|+|... .++.||+|++||+|||+.+. .+++.|+++|+||||+|
T Consensus 428 ~~p~y~Y~f~~~~~--------~~~~Ga~H~~el~yvF~~~~----------------~~s~~m~~~W~nFaktG 478 (534)
T 1llf_A 428 GGTKYSFLSKQLSG--------LPIMGTFHANDIVWQDYLLG----------------SGSVIYNNAFIAFATDL 478 (534)
T ss_dssp SSCEEEEEECTTTT--------CTTTSSBTTHHHHHHHTCCC----------------TTHHHHTHHHHHHHHHS
T ss_pred CCCceEEEEecCCC--------CCCCCeeccchhHHHhCCch----------------HHHHHHHHHHHHHhccC
Confidence 78999999998421 13679999999999995321 25789999999999987
No 14
>1nwd_B GAD, glutamate decarboxylase; calmodulin-peptide complex, calmodulin, dimer, binding protein/hydrolase comple; NMR {Petunia x hybrida}
Probab=74.86 E-value=3.6 Score=16.93 Aligned_cols=17 Identities=12% Similarity=0.071 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHhhhc
Q psy13956 65 EKLHSEVILTWVSNFAR 81 (83)
Q Consensus 65 d~~~s~~m~~~w~nFAk 81 (83)
|.++.-.|++.|-.|+.
T Consensus 7 dsevqlemitawkkfve 23 (28)
T 1nwd_B 7 DSEVQLEMITAWKKFVE 23 (28)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 55566789999999974
No 15
>2ad6_B Methanol dehydrogenase subunit 2; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: a.137.2.1 PDB: 1g72_B* 2ad7_B* 2ad8_B* 4aah_B*
Probab=39.45 E-value=22 Score=18.02 Aligned_cols=17 Identities=18% Similarity=0.089 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHhhhccC
Q psy13956 67 LHSEVILTWVSNFARSG 83 (83)
Q Consensus 67 ~~s~~m~~~w~nFAktG 83 (83)
.|-+|=..-|.||.+||
T Consensus 46 ame~RN~kRv~~fkkTG 62 (69)
T 2ad6_B 46 AMDARNAKRIANAKSSG 62 (69)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 56667778899999998
No 16
>3c0t_B Mediator of RNA polymerase II transcription subunit 8; beta barrel, channel, protein-protein complex, activator, nucleus; 2.40A {Schizosaccharomyces pombe}
Probab=39.42 E-value=20 Score=15.21 Aligned_cols=15 Identities=33% Similarity=0.534 Sum_probs=11.5
Q ss_pred HHHHHHHHHhhhccC
Q psy13956 69 SEVILTWVSNFARSG 83 (83)
Q Consensus 69 s~~m~~~w~nFAktG 83 (83)
++.|.+-..+|.|+|
T Consensus 6 anqmltdilsfmksg 20 (33)
T 3c0t_B 6 ANQMLTDILSFMKSG 20 (33)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcc
Confidence 567777788888876
No 17
>1w6s_B Methanol dehydrogenase subunit 2; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: a.137.2.1 PDB: 1h4j_B* 1h4i_B* 2d0v_B*
Probab=36.30 E-value=26 Score=17.99 Aligned_cols=17 Identities=29% Similarity=0.341 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHhhhccC
Q psy13956 67 LHSEVILTWVSNFARSG 83 (83)
Q Consensus 67 ~~s~~m~~~w~nFAktG 83 (83)
.|-+|=..-|.||.+||
T Consensus 46 ame~RN~kRv~~fkkTG 62 (74)
T 1w6s_B 46 QMEERNKKRVENFKKTG 62 (74)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 56667778899999998
No 18
>1lrw_B Methanol dehydrogenase subunit 2; heavy subunits: 8-fold beta-propeller superbarrel, oxidoreductase; HET: PQQ; 2.50A {Paracoccus denitrificans} SCOP: a.137.2.1
Probab=33.10 E-value=31 Score=18.05 Aligned_cols=17 Identities=18% Similarity=0.085 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHhhhccC
Q psy13956 67 LHSEVILTWVSNFARSG 83 (83)
Q Consensus 67 ~~s~~m~~~w~nFAktG 83 (83)
.|-+|=..-|.||.+||
T Consensus 46 ame~RN~kRv~~fkkTG 62 (83)
T 1lrw_B 46 VMDARNEWRVWNMKKTG 62 (83)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 56667778899999998
No 19
>1z8u_A Alpha-hemoglobin stabilizing protein; alpha haemoglobin, AHSP, oxidation, interaction, electron transport; HET: HEM; 2.40A {Homo sapiens} SCOP: a.7.11.1 PDB: 1y01_A* 1w0b_A 3ovu_A* 1w09_A 1w0a_A 3ia3_A* 1xzy_A
Probab=32.05 E-value=48 Score=18.04 Aligned_cols=15 Identities=13% Similarity=0.171 Sum_probs=10.0
Q ss_pred CHHHHHHHHHHHHHHHhh
Q psy13956 62 TTREKLHSEVILTWVSNF 79 (83)
Q Consensus 62 ~~~d~~~s~~m~~~w~nF 79 (83)
+++| ...+++-|.||
T Consensus 33 ~ee~---MvtvV~DWvnf 47 (102)
T 1z8u_A 33 SEED---MVTVVEDWMNF 47 (102)
T ss_dssp CHHH---HHHHHHHHHHH
T ss_pred CHHH---HHHHHHHHHHH
Confidence 5554 35677888877
No 20
>2v6u_A Pterin-4A-carbinolamine dehydratase; lyase, enzyme; 1.6A {Toxoplasma gondii} PDB: 2v6s_A 2v6t_A*
Probab=24.45 E-value=40 Score=18.35 Aligned_cols=23 Identities=13% Similarity=0.182 Sum_probs=19.1
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhc
Q psy13956 59 SKYTTREKLHSEVILTWVSNFAR 81 (83)
Q Consensus 59 ~~~~~~d~~~s~~m~~~w~nFAk 81 (83)
...|+.|..|+.+|-.+...|.|
T Consensus 82 gGlT~~D~~lA~~id~l~~~~~~ 104 (104)
T 2v6u_A 82 AGLTEKDFALAKFMDDAAKNFEK 104 (104)
T ss_dssp TBCCHHHHHHHHHHHHHHHTTC-
T ss_pred CCCCHHHHHHHHHHHHHHHHhcC
Confidence 35699999999999999888865
No 21
>2ftx_A Hypothetical 25.2 kDa protein in AFG3-SEB2 intergenic region; alpha-beta, complex, coiled-coil, structural protein, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.300.1.1 PDB: 2fv4_A
Probab=24.09 E-value=26 Score=18.90 Aligned_cols=15 Identities=13% Similarity=0.271 Sum_probs=12.8
Q ss_pred CCCCCCCchhhcCCc
Q psy13956 35 QSVSGEEVPYFLGVP 49 (83)
Q Consensus 35 Ga~H~~dl~yvF~~~ 49 (83)
||.|.|.|.|+|..-
T Consensus 21 ~a~~~d~LrFvF~~i 35 (90)
T 2ftx_A 21 GASDVHDVRFVFGDD 35 (90)
T ss_dssp CSSSSSCEEEEESSS
T ss_pred CCCCCceEEEEEEcc
Confidence 889999999999753
No 22
>3iz6_S 40S ribosomal protein S19 (S19E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=23.27 E-value=18 Score=21.32 Aligned_cols=8 Identities=0% Similarity=0.185 Sum_probs=6.2
Q ss_pred HHhhhccC
Q psy13956 76 VSNFARSG 83 (83)
Q Consensus 76 w~nFAktG 83 (83)
|+.|+|||
T Consensus 36 W~d~vKTg 43 (146)
T 3iz6_S 36 WVDIVKTA 43 (146)
T ss_dssp TGGGCCSS
T ss_pred hHHHhhcc
Confidence 77888876
No 23
>2xzm_T RPS19E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_T
Probab=21.48 E-value=26 Score=20.86 Aligned_cols=9 Identities=0% Similarity=0.147 Sum_probs=6.8
Q ss_pred HHHhhhccC
Q psy13956 75 WVSNFARSG 83 (83)
Q Consensus 75 ~w~nFAktG 83 (83)
-|+.|+|||
T Consensus 36 ~W~d~vKTg 44 (155)
T 2xzm_T 36 EFTQWTTTS 44 (155)
T ss_dssp HHHHSCCCS
T ss_pred chHhhhhcc
Confidence 488888876
No 24
>3lqb_A Hatching enzyme, LOC792177 protein; hydrolase, metalloprotease, astacin, metal- protease; 1.10A {Danio rerio}
Probab=21.34 E-value=1.3e+02 Score=18.20 Aligned_cols=36 Identities=14% Similarity=0.213 Sum_probs=24.6
Q ss_pred CCCCCCCCC-CchhhcCCcCCCCCCCcCCCCCHHHHHHHHHHHHHHHh
Q psy13956 32 KTDQSVSGE-EVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSN 78 (83)
Q Consensus 32 ~~~Ga~H~~-dl~yvF~~~~~~~~~~~~~~~~~~d~~~s~~m~~~w~n 78 (83)
.|.....|- .|||.|.. .++++++...+..++.|.+
T Consensus 11 ~W~k~~~G~v~VPY~i~~-----------~~~~~~~~~I~~A~~~w~~ 47 (199)
T 3lqb_A 11 FWKKNANNIVEVPYVVSG-----------EFSINDKSVIANAISIFHA 47 (199)
T ss_dssp SCCBCTTSCEEEEEEECT-----------TSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEEEECC-----------CCCHHHHHHHHHHHHHHHh
Confidence 454444454 79999953 2367778888888888875
No 25
>3u5c_T 40S ribosomal protein S19-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_S 3o30_M 3o2z_M 3u5g_T 3jyv_T*
Probab=21.20 E-value=17 Score=21.41 Aligned_cols=17 Identities=0% Similarity=0.044 Sum_probs=11.5
Q ss_pred HHHHHHHHH-------HHhhhccC
Q psy13956 67 LHSEVILTW-------VSNFARSG 83 (83)
Q Consensus 67 ~~s~~m~~~-------w~nFAktG 83 (83)
.+++.+-+- |+.|+|||
T Consensus 17 ~~A~~LK~~gki~~P~W~d~vKTg 40 (144)
T 3u5c_T 17 AYASFLQRQGKLEVPGYVDIVKTS 40 (144)
T ss_dssp HHHHHHHHHCCCCCTTTTTSCCSC
T ss_pred HHHHHHHHcCCCCCCchHhHhhcc
Confidence 445555444 99999987
No 26
>1yod_A Water-solublized phospholamban; protein design, water-soluble, de novo protein; 1.80A {Synthetic}
Probab=20.78 E-value=63 Score=13.54 Aligned_cols=12 Identities=8% Similarity=-0.039 Sum_probs=8.9
Q ss_pred HHHHHHHHHhhh
Q psy13956 69 SEVILTWVSNFA 80 (83)
Q Consensus 69 s~~m~~~w~nFA 80 (83)
.+.++.+++||.
T Consensus 4 rqNlQ~LfvNfc 15 (30)
T 1yod_A 4 RQNLQNLYINRC 15 (30)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 356788888884
Done!