BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13959
(248 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q95V39|RL8_SPOFR 60S ribosomal protein L8 OS=Spodoptera frugiperda GN=RpL8 PE=2 SV=1
Length = 257
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/238 (89%), Positives = 226/238 (94%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIRAQRKGAGSVF SH K RKGAPKLRSLD+AERHGY+KGVV+DIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
VHFR+PYKFKT KELFIAPEG+YTGQFVYCGKKATL++GNVMPVG MPEGTIVCNLEEK
Sbjct: 61 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRGRLARASGN+ATVI HNPD KRTRVKLPSGAKKV+PS+NR MVGIVAGGGRIDKPIL
Sbjct: 121 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAGRA++KYK KRNCWP VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV ++
Sbjct: 181 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLI 238
>sp|Q6RYS3|RL8_MAMBR 60S ribosomal protein L8 OS=Mamestra brassicae GN=RpL8 PE=2 SV=1
Length = 257
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/238 (89%), Positives = 226/238 (94%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIRAQRKGAGSVF SH K RKGAPKLRSLD+AERHGY+KGVV+DIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
VHFR+PYKFKT KELFIAPEG+YTGQFVYCGKKATL++GNVMPVG MPEGTIVCNLEEK
Sbjct: 61 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRGRLARASGN+ATVI HNPD KRTRVKLPSGAKKV+PS+NR MVGIVAGGGRIDKPIL
Sbjct: 121 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAGRA++KYK KRNCWP VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV ++
Sbjct: 181 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLI 238
>sp|Q9V3G1|RL8_DROME 60S ribosomal protein L8 OS=Drosophila melanogaster GN=RpL8 PE=2
SV=1
Length = 256
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/238 (86%), Positives = 225/238 (94%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIRAQRKGAGSVF++H K RKGA KLRSLDFAER GY++GVV+DIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
VHFR+PY++K KELFIAPEGM+TGQFVYCG+KATLQIGNVMP+ MPEGTI+CNLEEKT
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRGRLAR SGNYATVIAHN DTK+TRVKLPSGAKKV+PSANRAMVGIVAGGGRIDKPIL
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPIL 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAGRA++KYK KRN WPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV ++
Sbjct: 181 KAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLI 238
>sp|Q9U9L2|RL8_ANOGA 60S ribosomal protein L8 OS=Anopheles gambiae GN=RpL8 PE=2 SV=2
Length = 261
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/238 (85%), Positives = 224/238 (94%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIRAQRKGAGSVFR+H K RKG PKLR LD+AERHGYLKGVV+ IIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFRAHTKKRKGEPKLRHLDYAERHGYLKGVVKQIIHDPGRGAPLAV 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V+FR+PY+F+ +K+LFIA EGMYTGQFVYCG++A LQIGNV+P+G MPEGTIVCNLEEKT
Sbjct: 61 VNFRDPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVLPIGLMPEGTIVCNLEEKT 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG+LAR SGNYA+VIAHNPDTKRTRVKLPSGAKKV+PSANRAM+GIVAGGGRIDKPIL
Sbjct: 121 GDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMIGIVAGGGRIDKPIL 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAGRA++KYK KRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGT GRKV ++
Sbjct: 181 KAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTPPGRKVGLI 238
>sp|P41569|RL8_AEDAL 60S ribosomal protein L8 OS=Aedes albopictus GN=RpL8 PE=3 SV=1
Length = 261
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/238 (85%), Positives = 219/238 (92%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIRAQRKG GSVF +H K RKG PKLR+LD+AERHGYLKG V+ IIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGEGSVFTAHTKKRKGEPKLRALDYAERHGYLKGTVKQIIHDPGRGAPLAV 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
VHFR+PYKF K+LFIA EGMYTGQFVYCGK+A LQIGNV+P+G MPEGTIVCNLEEKT
Sbjct: 61 VHFRDPYKFNVRKQLFIAAEGMYTGQFVYCGKRAQLQIGNVLPIGLMPEGTIVCNLEEKT 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG+LAR SGNYA+VIAHNPDTKRTRVKLPSGAKKV+PSANRAMVGIVAGGGRIDKPIL
Sbjct: 121 GDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRIDKPIL 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAGRA+ KYK KRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGT GRKV ++
Sbjct: 181 KAGRAYRKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTPPGRKVGLI 238
>sp|Q6PBF0|RL8_XENTR 60S ribosomal protein L8 OS=Xenopus tropicalis GN=rpl8 PE=2 SV=3
Length = 257
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/238 (79%), Positives = 217/238 (91%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIR QRKGAGSVF++H KHRKGA KLR++DFAERHGY+KG+V+DIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V FR+PY+FK ELF+A EG++TGQFVYCGKKA L IGNV+PVG MPEGTIVC +EEK
Sbjct: 61 VAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCVEEKP 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG+LARASGNYATVI+HNP+TK+TRVKLPSG+KKVI SANRA+VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAIVGVVAGGGRIDKPIL 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAGRA++KYKAKRNCWP+VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKV ++
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>sp|P41116|RL8_XENLA 60S ribosomal protein L8 OS=Xenopus laevis GN=rpl8 PE=2 SV=3
Length = 257
Score = 395 bits (1016), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/238 (78%), Positives = 217/238 (91%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIR QRKGAGSVF++H KHRKGA KLR++DFAER+GY+KG+V+DIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRAIDFAERNGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V FR+PY+FK ELF+A EG++TGQFVYCGKKA L IGNV+PVG MPEGTIVC +EEK
Sbjct: 61 VAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCVEEKP 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG+LARASGNYATVI+HNP+TK+TRVKLPSG+KKVI SANRA+VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAIVGVVAGGGRIDKPIL 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAGRA++KYKAKRNCWP+VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKV ++
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>sp|Q9XVF7|RL8_CAEEL 60S ribosomal protein L8 OS=Caenorhabditis elegans GN=rpl-8 PE=1
SV=1
Length = 260
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 175/238 (73%), Positives = 212/238 (89%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGR IR QRKGAG +F+SHNKHRKGA KLR LD+AERHGY+KG+V+DIIHDPGRGAPLA+
Sbjct: 1 MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAI 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
+ FR+PYK+KT K +A EGM+TGQF++CG KA +QIGN++PVG +PEGT +CN+E K+
Sbjct: 61 IAFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKS 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG +ARASGNYATVIAHNPDTK+TR++LPSGAKKV+ S NRAM+G+VAGGGR DKP+L
Sbjct: 121 GDRGVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLL 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAGR+++KYKAKRN WP+VRGVAMNPVEHPHGGGNHQHIG STV+R SAG+KV ++
Sbjct: 181 KAGRSYHKYKAKRNSWPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRDASAGKKVGLI 238
>sp|Q5R7Y8|RL8_PONAB 60S ribosomal protein L8 OS=Pongo abelii GN=RPL8 PE=2 SV=3
Length = 257
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/247 (78%), Positives = 220/247 (89%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIR QRKGAGSVFR+H KHRKGA +LR++DFAERHGY+KG+V+DIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V FR+PY+FK ELFIA EG++TGQFVYCGKKA L IGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG+LARASGNYATVI+HNP+TK+TRVKLPSG+KKVI SANRA+VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVLLL 240
KAGRA++KYKAKRNCWP+VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKV ++ +
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAV 240
Query: 241 YIQGSSR 247
G R
Sbjct: 241 RRTGRLR 247
>sp|P62919|RL8_RAT 60S ribosomal protein L8 OS=Rattus norvegicus GN=Rpl8 PE=2 SV=2
Length = 257
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/238 (80%), Positives = 217/238 (91%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIR QRKGAGSVFR+H KHRKGA +LR++DFAERHGY+KG+V+DIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V FR+PY+FK ELFIA EG++TGQFVYCGKKA L IGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG+LARASGNYATVI+HNP+TK+TRVKLPSG+KKVI SANRA+VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAGRA++KYKAKRNCWP+VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKV ++
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>sp|P62918|RL8_MOUSE 60S ribosomal protein L8 OS=Mus musculus GN=Rpl8 PE=2 SV=2
Length = 257
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/238 (80%), Positives = 217/238 (91%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIR QRKGAGSVFR+H KHRKGA +LR++DFAERHGY+KG+V+DIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V FR+PY+FK ELFIA EG++TGQFVYCGKKA L IGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG+LARASGNYATVI+HNP+TK+TRVKLPSG+KKVI SANRA+VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAGRA++KYKAKRNCWP+VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKV ++
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>sp|P62917|RL8_HUMAN 60S ribosomal protein L8 OS=Homo sapiens GN=RPL8 PE=1 SV=2
Length = 257
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/238 (80%), Positives = 217/238 (91%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIR QRKGAGSVFR+H KHRKGA +LR++DFAERHGY+KG+V+DIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V FR+PY+FK ELFIA EG++TGQFVYCGKKA L IGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG+LARASGNYATVI+HNP+TK+TRVKLPSG+KKVI SANRA+VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAGRA++KYKAKRNCWP+VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKV ++
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>sp|Q3T0S6|RL8_BOVIN 60S ribosomal protein L8 OS=Bos taurus GN=RPL8 PE=2 SV=3
Length = 257
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/238 (80%), Positives = 217/238 (91%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIR QRKGAGSVFR+H KHRKGA +LR++DFAERHGY+KG+V+DIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V FR+PY+FK ELFIA EG++TGQFVYCGKKA L IGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG+LARASGNYATVI+HNP+TK+TRVKLPSG+KKVI SANRA+VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAGRA++KYKAKRNCWP+VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKV ++
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>sp|Q6P0V6|RL8_DANRE 60S ribosomal protein L8 OS=Danio rerio GN=rpl8 PE=2 SV=3
Length = 257
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/238 (79%), Positives = 216/238 (90%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIR QRKGAGSVF++H KHRKGA KLR +DFAERHGY+KG+V+DIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRHIDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V FR+PY+FK ELFIA EG++TGQF+YCGKKA L IGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VMFRDPYRFKKRTELFIAAEGIHTGQFIYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG+LARASGNYATVI+HNP+TK++RVKLPSG+KKVI SANRA+VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKSRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAGRA++KYKAKRNCWP+VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKV ++
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>sp|Q90YW1|RL8_ICTPU 60S ribosomal protein L8 OS=Ictalurus punctatus GN=rpl8 PE=2 SV=3
Length = 257
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/238 (78%), Positives = 214/238 (89%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIRAQRKGAGSVF++H KHRKGA KLR +DFAERHGY+KG+V+DIIHDPGRG PLA
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKHRKGAAKLRHIDFAERHGYIKGIVKDIIHDPGRGTPLAK 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V FR+PY+FK ELFIA EG++TGQFV+CGKKA L IGNV+PVG MPEGTI+C LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVFCGKKAQLNIGNVLPVGVMPEGTIICCLEEKP 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG+LARASGNYATVI+HNP+TK++RVKLPSGAKKVI S NRA+VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKSRVKLPSGAKKVISSTNRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAGRA++KYK KRNCWP+VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKV ++
Sbjct: 181 KAGRAYHKYKVKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDVPAGRKVGLI 238
>sp|Q42064|RL83_ARATH 60S ribosomal protein L8-3 OS=Arabidopsis thaliana GN=RPL8C PE=1
SV=2
Length = 258
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/238 (71%), Positives = 201/238 (84%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIRAQRKGAGSVF+SH HRKG K RSLDF ER+GYLKGVV +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V FR+P++FK KELF+A EGMYTGQF+YCGKKATL +GNV+P+ +PEG ++CN+E
Sbjct: 61 VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG ARASG+YA VIAHNPD +R+KLPSG+KK++PS RAM+G VAGGGR +KP+L
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAG A++KY+ KRNCWPKVRGVAMNPVEHPHGGGNHQHIG ASTV+R G+KV ++
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLI 238
>sp|P46286|RL81_ARATH 60S ribosomal protein L8-1 OS=Arabidopsis thaliana GN=RPL8A PE=1
SV=2
Length = 258
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/238 (72%), Positives = 202/238 (84%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIRAQRKGAGSVF+SH HRKG K RSLDF ER+GYLKGVV +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V FR+P++FK KELF+A EGMYTGQF+YCGKKATL +GNV+P+ +PEG +VCN+E
Sbjct: 61 VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG LARASG+YA VIAHNPD+ TR+KLPSG+KK++PS RAM+G VAGGGR +KP+L
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAG A++KY+ KRN WPKVRGVAMNPVEHPHGGGNHQHIG ASTV+R G+KV ++
Sbjct: 181 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
>sp|P29766|RL8_SOLLC 60S ribosomal protein L8 OS=Solanum lycopersicum GN=RPL8 PE=2 SV=1
Length = 260
Score = 362 bits (930), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 169/238 (71%), Positives = 201/238 (84%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIRAQRKGAGSVF+SH HRKG + R+LDF ER+GYLKGV+ ++IHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLAR 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V FR+P+++K KELF+A EGMYTGQFVYCGKKATL +GNV+P+ +PEG +VCN+E K
Sbjct: 61 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG AR SG+YA VI+HNPD TRVKLPSGAKK++PS RAM+G VAGGGR +KP+L
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAG A++KY+ KRNCWPKVRGVAMNPVEHPHGGGNHQHIG ASTV+R G+KV ++
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
>sp|Q4PSL7|RL82_ARATH 60S ribosomal protein L8-2 OS=Arabidopsis thaliana GN=RPL8B PE=2
SV=3
Length = 260
Score = 360 bits (923), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 171/236 (72%), Positives = 202/236 (85%), Gaps = 1/236 (0%)
Query: 1 MGRVIRAQRKGA-GSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MGRVIRAQRKGA GSVF+SH HRKG K RSLD+ ER+GYLKG+V +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
V FR+P+++ KELF+A EGMYTGQ++YCGKKA L +GNV+P+G +PEG ++CN+E
Sbjct: 61 RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GDRG LARASG+YA VIAHNP++ TRVKLPSG+KK++PSA RAM+G VAGGGR +KP+
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPL 180
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
LKAG A++KYKAKRNCWP VRGVAMNPVEHPHGGGNHQHIG ASTV+R SAG KV
Sbjct: 181 LKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKV 236
>sp|P25998|RL8_TOBAC 60S ribosomal protein L8 OS=Nicotiana tabacum GN=RPL8 PE=2 SV=1
Length = 260
Score = 353 bits (905), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 165/238 (69%), Positives = 196/238 (82%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGR+IRAQRKGAGSVF+SH HRKG + RSLDF ER+GYLKGV+ ++IHDPGRGAPLA
Sbjct: 1 MGRLIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEVIHDPGRGAPLAR 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V FR P+++ KELF+A EGMYTGQFVYCGKKATL +GNV+P+ +PEG +VCN+E K
Sbjct: 61 VTFRYPFRYNHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG AR SG YA VI+HNPD TR+KLPSG+KK++PS R M+G VAGGGR +KP+L
Sbjct: 121 GDRGVFARCSGAYAIVISHNPDNGTTRIKLPSGSKKIVPSGCRRMIGQVAGGGRTEKPML 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAG A++KY+ KRNCWPKVRGVAMNPVEHPHGGGNHQHIG ASTV R G+KV ++
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVARDAPPGQKVGLI 238
>sp|P13023|RL8_DICDI 60S ribosomal protein L8 OS=Dictyostelium discoideum GN=rpl8 PE=1
SV=2
Length = 255
Score = 351 bits (901), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 166/239 (69%), Positives = 203/239 (84%), Gaps = 1/239 (0%)
Query: 1 MGRVIRAQRKG-AGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MGR+IRAQRKG AGSVF +H HRKG P+ R+LD+AER GY+KGVV++IIHDPGRGAPLA
Sbjct: 1 MGRIIRAQRKGKAGSVFGAHTHHRKGTPRFRALDYAERQGYVKGVVKEIIHDPGRGAPLA 60
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
V F+ +FK +K+LFIAPEGM+TGQFV+ GKKATL IGN++P+G +PEGTI+CN+EEK
Sbjct: 61 RVVFKGLTQFKLDKQLFIAPEGMHTGQFVFAGKKATLTIGNILPIGKLPEGTIICNVEEK 120
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G +AR SGNYAT+++HNPD TR+KLPSG+KK + S RAM+GIVAGGGRIDKP+
Sbjct: 121 LGDCGAVARCSGNYATIVSHNPDEGVTRIKLPSGSKKNVSSLARAMIGIVAGGGRIDKPM 180
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
LKAGRA +KY+ K+N WPKVRGVAMNPVEHPHGGGNHQH+G A+T KR AG+KV ++
Sbjct: 181 LKAGRAFHKYRVKKNNWPKVRGVAMNPVEHPHGGGNHQHVGHATTTKRDDPAGKKVGLI 239
>sp|Q6FPN7|RL2_CANGA 60S ribosomal protein L2 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPL2 PE=4
SV=1
Length = 254
Score = 337 bits (865), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 163/238 (68%), Positives = 201/238 (84%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIR QRKGAGS+F SH + R+GA KLR+LD+AERHGY++GVV+ I+HD GRGAPLA
Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGVVKQIVHDAGRGAPLAK 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V FR+PYK+K +E+FIA EG++TGQF+Y GKKA+L +GNV+P+G +PEGTIV N+EEK
Sbjct: 61 VVFRDPYKYKLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKP 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG LARASGNY +I HNPD +TRV+LPSGAKK+I S R ++G++AGGGR DKP+L
Sbjct: 121 GDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKIISSDARGVIGVIAGGGRTDKPLL 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAGRA +KYK KRN WPK RGVAMNPV+HPHGGGNHQHIGKAST+ RG +G+K ++
Sbjct: 181 KAGRAFHKYKLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLI 238
>sp|P0CX46|RL2B_YEAST 60S ribosomal protein L2-B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL2B PE=1 SV=1
Length = 254
Score = 337 bits (863), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 161/238 (67%), Positives = 202/238 (84%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIR QRKGAGS+F SH + R+GA KLR+LD+AERHGY++G+V+ I+HD GRGAPLA
Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGIVKQIVHDSGRGAPLAK 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V FR+PYK++ +E+FIA EG++TGQF+Y GKKA+L +GNV+P+G +PEGTIV N+EEK
Sbjct: 61 VVFRDPYKYRLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKP 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG LARASGNY +I HNPD +TRV+LPSGAKKVI S R ++G++AGGGR+DKP+L
Sbjct: 121 GDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLL 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAGRA +KY+ KRN WPK RGVAMNPV+HPHGGGNHQHIGKAST+ RG +G+K ++
Sbjct: 181 KAGRAFHKYRLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLI 238
>sp|P0CX45|RL2A_YEAST 60S ribosomal protein L2-A OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL2A PE=1 SV=1
Length = 254
Score = 337 bits (863), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 161/238 (67%), Positives = 202/238 (84%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIR QRKGAGS+F SH + R+GA KLR+LD+AERHGY++G+V+ I+HD GRGAPLA
Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGIVKQIVHDSGRGAPLAK 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V FR+PYK++ +E+FIA EG++TGQF+Y GKKA+L +GNV+P+G +PEGTIV N+EEK
Sbjct: 61 VVFRDPYKYRLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKP 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG LARASGNY +I HNPD +TRV+LPSGAKKVI S R ++G++AGGGR+DKP+L
Sbjct: 121 GDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLL 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAGRA +KY+ KRN WPK RGVAMNPV+HPHGGGNHQHIGKAST+ RG +G+K ++
Sbjct: 181 KAGRAFHKYRLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLI 238
>sp|P08093|RL2_SCHPO 60S ribosomal protein L2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rpl2a PE=3 SV=2
Length = 253
Score = 336 bits (861), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 164/238 (68%), Positives = 203/238 (85%), Gaps = 1/238 (0%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIRAQRK +G +F++H + RKGA +LR+LDFAERHGY++GVV+ IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRK-SGGIFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLAK 59
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V FRNPY ++T+ E F+A EGMYTGQFVYCGK A L +GNV+PVG MPEGTI+ N+EEK
Sbjct: 60 VAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEKA 119
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG L R+SGNY ++ H+ DT +TRVKLPSGAKKV+PS+ R +VGIVAGGGRIDKP+L
Sbjct: 120 GDRGALGRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPLL 179
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAGRA +KY+ KRNCWP+ RGVAMNPV+HPHGGGNHQH+G ++TV R ++ G+KV ++
Sbjct: 180 KAGRAFHKYRVKRNCWPRTRGVAMNPVDHPHGGGNHQHVGHSTTVPRQSAPGQKVGLI 237
>sp|Q75AP7|RL2_ASHGO 60S ribosomal protein L2 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPL2 PE=4 SV=1
Length = 254
Score = 332 bits (852), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 158/238 (66%), Positives = 199/238 (83%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MGRVIR QRKGAGS+F SH + R+GA KLR+LD+AERHGY++GVV+ I+HD GRGAPLA
Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGVVKQIVHDAGRGAPLAK 60
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V FR+PYK+K +E FIA EG++TGQF+Y GK A+L +GN++P+G +PEGTIV N+EE+
Sbjct: 61 VVFRDPYKYKLREETFIANEGVHTGQFIYAGKNASLNVGNILPLGSVPEGTIVSNVEERP 120
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
GDRG LAR SGNY VI HNPD +TR++LPSGAKK++ S R ++G++AGGGR+DKP+L
Sbjct: 121 GDRGALARTSGNYVIVIGHNPDENKTRIRLPSGAKKIVSSDARGVIGVIAGGGRVDKPLL 180
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAGRA +KYK KRN WPK RGVAMNPV+HPHGGGNHQHIGKAST+ RG +G+K ++
Sbjct: 181 KAGRAFHKYKVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLI 238
>sp|P0DJ52|RL8_TETTS 60S ribosomal protein L8 OS=Tetrahymena thermophila (strain SB210)
GN=RPL8 PE=1 SV=1
Length = 264
Score = 320 bits (821), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 152/238 (63%), Positives = 187/238 (78%), Gaps = 1/238 (0%)
Query: 1 MGRVIRAQRKG-AGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MGRVIRAQRKG A V++SH R + R DFAER GY++G +RDI+H+PGRGAPLA
Sbjct: 1 MGRVIRAQRKGRANGVYKSHKSGRIAPAQYRVYDFAERQGYIRGCIRDIVHEPGRGAPLA 60
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
V FR+PY++KTNKE FIA EG Y+GQ+VYCG KA + +GNV+P+ +PEGT+VCN+EEK
Sbjct: 61 EVAFRDPYRYKTNKEHFIAAEGQYSGQYVYCGLKAQIAVGNVLPINRIPEGTVVCNVEEK 120
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GDRG +RASG YAT+I H+ D +TR++LPSGA+K IP + RA VGIVAGGGR DKPI
Sbjct: 121 VGDRGTFSRASGCYATIIGHSEDGDKTRIRLPSGARKTIPGSCRATVGIVAGGGRTDKPI 180
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSV 237
LKAG +KY KR WP+VRGVAMNPV+HPHGGGNHQHIG +TV + SAG+KV +
Sbjct: 181 LKAGNQFHKYARKRKSWPRVRGVAMNPVDHPHGGGNHQHIGHPATVSKWASAGQKVGL 238
>sp|A9A9B5|RL2_METM6 50S ribosomal protein L2P OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=rpl2p PE=3 SV=1
Length = 240
Score = 218 bits (554), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 157/236 (66%), Gaps = 8/236 (3%)
Query: 1 MGRVIRAQRKGAGSV-FRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ + +Q +G G+ +RS + RKGA K RS D E+ G + G V DI+HDPGR AP+A
Sbjct: 1 MGKRLISQNRGRGTPKYRSPSHKRKGAVKYRSYDEMEKDGKILGTVVDILHDPGRSAPVA 60
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
V F N + L + PEG+ G+ + CG A ++ GNV+P+G +PEG V N+E
Sbjct: 61 KVRFAN-----DEERLVLIPEGIQVGEEIECGISAEIKPGNVLPLGEIPEGIPVYNIETI 115
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G+L R+ G YA V++H D +T VKLPSG KV+ A RA VG+VAGGGR +KP
Sbjct: 116 PGDGGKLVRSGGCYAHVVSH--DVGKTIVKLPSGFSKVLNPACRATVGVVAGGGRKEKPF 173
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
+KAG+ H+ AK WPKVRGVAMN V+HP+GGG HQH+GK S+V R TS GRKV
Sbjct: 174 VKAGKKHHSLSAKAIAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRHTSPGRKV 229
>sp|A6VHD5|RL2_METM7 50S ribosomal protein L2P OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=rpl2p PE=3 SV=1
Length = 240
Score = 218 bits (554), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 156/236 (66%), Gaps = 8/236 (3%)
Query: 1 MGRVIRAQRKGAGSV-FRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ + +Q +G G+ +RS RKGA K RS D E+ G + G V DI+HDPGR AP+A
Sbjct: 1 MGKRLISQNRGRGTPKYRSPTHKRKGAVKYRSYDEMEKDGKILGTVVDILHDPGRSAPVA 60
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
V F N + L + PEG+ G+ + CG A ++ GNV+P+G +PEG V N+E
Sbjct: 61 KVRFAN-----DEERLVLIPEGIQVGEEIECGISAEIKPGNVLPLGEIPEGIPVYNIETI 115
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G+L R+ G YA V++H D +T VKLPSG KV+ A RA VG+VAGGGR +KP
Sbjct: 116 PGDGGKLVRSGGCYAHVVSH--DVGKTIVKLPSGFSKVLNPACRATVGVVAGGGRKEKPF 173
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
+KAG+ H+ AK WPKVRGVAMN V+HP+GGG HQH+GK S+V R TS GRKV
Sbjct: 174 VKAGKKHHSLSAKAIAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRHTSPGRKV 229
>sp|A4FVX9|RL2_METM5 50S ribosomal protein L2P OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=rpl2p PE=3 SV=1
Length = 240
Score = 216 bits (550), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 156/236 (66%), Gaps = 8/236 (3%)
Query: 1 MGRVIRAQRKGAGSV-FRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ + +Q +G G+ +RS RKGA K RS D E+ G + G V DI+HDPGR AP+A
Sbjct: 1 MGKRLISQNRGRGTPKYRSPTHKRKGAVKYRSYDEMEKDGKILGTVVDILHDPGRSAPVA 60
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
V F N + L + PEG+ G+ + CG A ++ GNV+P+G +PEG V N+E
Sbjct: 61 KVRFAN-----DEERLVLIPEGIQVGEEIECGISAEIKPGNVLPLGEIPEGIPVYNIETI 115
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G+L R+ G YA VI+H D +T VKLPSG KV+ A RA VG+VAGGGR +KP
Sbjct: 116 PGDGGKLVRSGGCYAHVISH--DVGKTIVKLPSGFSKVLNPACRATVGVVAGGGRKEKPF 173
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
+KAG+ ++ AK WPKVRGVAMN V+HP+GGG HQH+GK S+V R TS GRKV
Sbjct: 174 VKAGKKYHSLSAKAVAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRHTSPGRKV 229
>sp|Q6LX08|RL2_METMP 50S ribosomal protein L2P OS=Methanococcus maripaludis (strain S2 /
LL) GN=rpl2p PE=3 SV=1
Length = 240
Score = 216 bits (549), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 156/236 (66%), Gaps = 8/236 (3%)
Query: 1 MGRVIRAQRKGAGSV-FRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ + +Q +G G+ +RS RKGA K RS D E+ G + G V DI+HDPGR AP+A
Sbjct: 1 MGKRLISQNRGRGTPKYRSPTHKRKGAVKYRSYDEMEKDGKILGTVIDILHDPGRSAPVA 60
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
V F N + L + PEG+ G+ + CG A ++ GNV+P+G +PEG V N+E
Sbjct: 61 KVKFAN-----DEERLVLIPEGIQVGEEIECGISAEIKPGNVLPLGEIPEGIPVYNIETI 115
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G+L R+ G YA VI+H D +T V+LPSG KV+ A RA VG+VAGGGR +KP
Sbjct: 116 PGDGGKLVRSGGCYAHVISH--DVGKTIVRLPSGFSKVLNPACRATVGVVAGGGRKEKPF 173
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
+KAG+ ++ AK WPKVRGVAMN V+HP+GGG HQHIGK S+V R TS GRKV
Sbjct: 174 VKAGKKYHSLSAKAVAWPKVRGVAMNAVDHPYGGGRHQHIGKPSSVSRHTSPGRKV 229
>sp|P21479|RL2_METVA 50S ribosomal protein L2P OS=Methanococcus vannielii GN=rpl2p PE=3
SV=1
Length = 237
Score = 216 bits (549), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 156/236 (66%), Gaps = 8/236 (3%)
Query: 1 MGRVIRAQRKGAGSV-FRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ + +Q +G G+ +RS + RKG K RS D E+ G + G V D++HDPGR AP+A
Sbjct: 1 MGKRLISQNRGRGTPKYRSPSHKRKGEVKYRSYDEMEKVGKVLGTVIDVLHDPGRSAPVA 60
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
V F N + L + PEG+ G+ + CG A ++ GNV+P+G +PEG V N+E
Sbjct: 61 KVRFAN-----GEERLVLIPEGISVGEQIECGISAEIKPGNVLPLGEIPEGIPVYNIETI 115
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G+L RA G YA V+AH D +T VKLPSG KV+ A RA +G+VAGGGR +KP
Sbjct: 116 PGDGGKLVRAGGCYAHVVAH--DIGKTIVKLPSGYAKVLNPACRATIGVVAGGGRKEKPF 173
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
+KAG+ H+ AK WPKVRGVAMN V+HP+GGG HQH+GK S+V R TS GRKV
Sbjct: 174 VKAGKKHHSLSAKAVAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRNTSPGRKV 229
>sp|A6UQJ3|RL2_METVS 50S ribosomal protein L2P OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rpl2p PE=3 SV=1
Length = 240
Score = 215 bits (547), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 156/236 (66%), Gaps = 8/236 (3%)
Query: 1 MGRVIRAQRKGAGSV-FRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ + +Q +G G+ +RS + RKG K RS D E+ G + G V D++HDPGR AP+A
Sbjct: 1 MGKRLISQNRGRGTPKYRSPSHKRKGEVKYRSYDEMEKVGKVLGTVIDVLHDPGRSAPVA 60
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
V F N + L + PEG+ G+ + CG A ++ GNV+P+G +PEG V N+E
Sbjct: 61 KVRFAN-----GEERLVLIPEGISVGEQIECGISAEIKPGNVLPLGEIPEGIPVYNIETI 115
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G+L RA G YA V+AH D +T VKLPSG KV+ A RA +G+VAGGGR +KP
Sbjct: 116 PGDGGKLVRAGGCYAHVVAH--DIGKTIVKLPSGYAKVLNPACRATIGVVAGGGRKEKPF 173
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
+KAG+ H+ AK WPKVRGVAMN V+HP+GGG HQH+GK S+V R TS GRKV
Sbjct: 174 VKAGKKHHSLSAKAVAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRNTSPGRKV 229
>sp|A6UV65|RL2_META3 50S ribosomal protein L2P OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rpl2p PE=3 SV=1
Length = 240
Score = 202 bits (514), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 149/236 (63%), Gaps = 8/236 (3%)
Query: 1 MGRVIRAQRKGAGSV-FRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ +++Q +G G+ + S RKGA K R D +ER + G + DI+HDPGR +P+A
Sbjct: 1 MGKRLQSQNRGKGTPRYTSPTHKRKGAVKYRKFDESERKDKIIGTIIDILHDPGRSSPIA 60
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
V + N + L + PEGM + CG A ++ GNV+P+G +PEG V N+E
Sbjct: 61 RVRYDN-----GEERLILIPEGMKIKDTIECGISAEIKPGNVLPLGEVPEGIPVYNIETI 115
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G+L R+ G YA VI H D +T +KLPSG K + RA +G+VAGGGR +KPI
Sbjct: 116 PGDGGKLVRSGGCYAHVITH--DVSKTIIKLPSGHMKTLNPMCRATIGVVAGGGRKEKPI 173
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
KAG+ ++ KAK WP+VRGVAMN V+HP GGGN QH GK +T+ R TS GRKV
Sbjct: 174 TKAGKKYHAMKAKAVLWPRVRGVAMNAVDHPFGGGNTQHAGKPTTISRHTSPGRKV 229
>sp|Q2NFV9|RL2_METST 50S ribosomal protein L2P OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rpl2p PE=3 SV=1
Length = 241
Score = 201 bits (511), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 110/236 (46%), Positives = 148/236 (62%), Gaps = 8/236 (3%)
Query: 1 MGRVIRAQRKGAGS-VFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ + QR+G G+ +RS + +G RS D ER G L G+V DIIHDPGR AP+A
Sbjct: 1 MGKRLIIQRRGRGTPTYRSSSHRFRGKVAYRSYDKLEREGSLTGIVIDIIHDPGRSAPVA 60
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
VV F N ++L +APE + + CG A+++ GN +P+ +PEGT V N+E
Sbjct: 61 VVKFDN-----GEEKLVLAPESIAIDDEIECGVSASIEPGNTLPLSEIPEGTPVFNIENN 115
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G+ R+SG YA++I H D +T +++PSG K +RA VG+VAGGGR +KP
Sbjct: 116 PGDGGKFVRSSGTYASLITH--DVDKTMIEMPSGELKAFNPRSRATVGVVAGGGRKEKPF 173
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
LKAG ++ KAK VRGVAMN V+HPHGGGN QH G+ +T+ R AGRKV
Sbjct: 174 LKAGNRYHALKAKGKKMMTVRGVAMNAVDHPHGGGNRQHPGRPTTISRHAPAGRKV 229
>sp|A3DNA7|RL2_STAMF 50S ribosomal protein L2P OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rpl2p PE=3 SV=1
Length = 239
Score = 201 bits (510), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 110/236 (46%), Positives = 148/236 (62%), Gaps = 11/236 (4%)
Query: 1 MGRVIRAQRKGAGS-VFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ I QR G G+ FRS + R G K L +KG + D++HDPGR PLA
Sbjct: 1 MGKRILPQRMGRGTPTFRSPSHRRVGPAKYPPLKLDR---TIKGKIIDLLHDPGRWVPLA 57
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
+ + F L A EGMY GQ + G A + GN++P+G +PEGT + N+E++
Sbjct: 58 KIVLEDGTTF-----LTPAVEGMYVGQIIEIGPDAHISNGNILPIGKIPEGTQIANIEKR 112
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G+ R+SG YA ++ +T+V+LPSG +P+ RA +G++AGGGR +KP+
Sbjct: 113 PGDGGKFVRSSGTYALIVGRA--GTKTQVQLPSGKIIEVPNNARATIGVIAGGGRDEKPL 170
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
LKAG A++K+K K WPKVRGVAMN V HPHGGG+HQH+GK STV R T GRKV
Sbjct: 171 LKAGNAYHKWKVKAKKWPKVRGVAMNAVSHPHGGGSHQHVGKPSTVARETPPGRKV 226
>sp|B8D5W9|RL2_DESK1 50S ribosomal protein L2P OS=Desulfurococcus kamchatkensis (strain
1221n / DSM 18924) GN=rpl2p PE=3 SV=1
Length = 239
Score = 200 bits (508), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 111/237 (46%), Positives = 152/237 (64%), Gaps = 13/237 (5%)
Query: 1 MGRVIRAQRKG-AGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ I QR+G A VF++ + + LD ++ + K VV D++HDPGR PLA
Sbjct: 1 MGKRIIPQRRGKASPVFKTPDHIHVAPARYPLLDPSKTY---KAVVEDLVHDPGRWVPLA 57
Query: 60 VVHFRNPYKFKTNKELFI-APEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEE 118
V K +T ++ A EGMY GQ + G A GN++PVG +PEG V N+E+
Sbjct: 58 QV------KLETGLVFYVPAVEGMYAGQIIEIGPGAKPVNGNILPVGMIPEGMQVVNIEK 111
Query: 119 KTGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKP 178
+ GD G+ RASG YA ++ +T+V+LPSG +P+ +RAM+G++AGGGR++KP
Sbjct: 112 RPGDGGKFVRASGTYAVIVGRA--GGKTQVQLPSGRVIEVPNESRAMIGVIAGGGRLEKP 169
Query: 179 ILKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
+LKAG A+YK+ AK WPKVRGVAMN HPHGGG+HQH+G+ STV R T GRKV
Sbjct: 170 LLKAGAAYYKWSAKSRVWPKVRGVAMNAAFHPHGGGSHQHVGRPSTVARNTPPGRKV 226
>sp|P54017|RL2_METJA 50S ribosomal protein L2P OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rpl2p PE=3 SV=2
Length = 242
Score = 198 bits (503), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 153/238 (64%), Gaps = 11/238 (4%)
Query: 1 MGRVIRAQRKGAGS-VFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ + +QR+G GS V+ + R+G K R D E+ G + G + DI+HDPGR AP+A
Sbjct: 1 MGKRLISQRRGRGSSVYTCPSHKRRGEAKYRRFDELEKKGKVLGKIVDILHDPGRSAPVA 60
Query: 60 VVHFRNPYKFKTNKE-LFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEE 118
V +++T +E L + PEG+ G + CG A ++ GN++P+G +PEG V N+E
Sbjct: 61 KV------EYETGEEGLLVVPEGVKVGDIIECGVSAEIKPGNILPLGAIPEGIPVFNIET 114
Query: 119 KTGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKP 178
GD G+L RA G YA ++ H D +RT VKLPSG K + S RA +G+VAGGGR +KP
Sbjct: 115 VPGDGGKLVRAGGCYAHILTH--DGERTYVKLPSGHIKALHSMCRATIGVVAGGGRKEKP 172
Query: 179 ILKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKR-GTSAGRKV 235
+KAG+ ++ KAK WP+VRGVAMN V+HP GGG HQH GK +TV R GRKV
Sbjct: 173 FVKAGKKYHAMKAKAVKWPRVRGVAMNAVDHPFGGGRHQHTGKPTTVSRKKVPPGRKV 230
>sp|O26113|RL2_METTH 50S ribosomal protein L2P OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=rpl2p PE=3 SV=1
Length = 241
Score = 196 bits (499), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 112/248 (45%), Positives = 153/248 (61%), Gaps = 8/248 (3%)
Query: 1 MGRVIRAQRKGAGS-VFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ + +QR+G G+ +RS + KG K R+ D E G LKG V DI+HDPGR AP+A
Sbjct: 1 MGKRLISQRRGRGTPTYRSASHRFKGKIKYRAYDSIESEGSLKGKVVDIMHDPGRTAPVA 60
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
V F N + L +APE + + V CG KA ++ GN +P+ +PEGT + N+E +
Sbjct: 61 RVKFEN-----GEERLILAPEALMLNEEVECGVKARVKPGNSLPLSEIPEGTPIYNIENR 115
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G+L R+SG YA++I H+ D + ++LPSG K + RA VG+VAGGGR +KP
Sbjct: 116 PGDGGKLVRSSGTYASLITHDAD--KAVIELPSGELKALNPQCRATVGVVAGGGRREKPF 173
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVLL 239
LKAG+ ++ +AK VRGVAMN V+HPHGGGN QH G+ +TV R GRKV +
Sbjct: 174 LKAGKKYHALRAKGKKSVTVRGVAMNAVDHPHGGGNRQHPGRPTTVSRHAPPGRKVGSIA 233
Query: 240 LYIQGSSR 247
G R
Sbjct: 234 ARRTGKRR 241
>sp|Q8U001|RL2_PYRFU 50S ribosomal protein L2P OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=rpl2p PE=1 SV=1
Length = 239
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/236 (46%), Positives = 147/236 (62%), Gaps = 10/236 (4%)
Query: 1 MGRVIRAQRKGAGS-VFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ + QR+G GS F+S + +GA K L++ + L+GVV +I+HDPGR AP+A
Sbjct: 1 MGKSLIQQRRGKGSPTFKSPSHRFRGAVKYIPLNYTQEK-TLRGVVEEIMHDPGRTAPVA 59
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
V F N ++L IAPEG+ GQ +Y G A + +GN +P+ +PEGT V N+E
Sbjct: 60 RVKFEN-----GIEKLIIAPEGLLVGQEIYIGPDAPIAVGNTLPLAKIPEGTYVYNIEGI 114
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G+ RA G YA V++ PD + V+LPSG K RA +G+VAGGGR++KP+
Sbjct: 115 PGDGGKYVRAGGTYALVVSREPD--KVIVQLPSGELKAFNPMCRATIGVVAGGGRLEKPL 172
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
+KAG+A+YKYKA+ WP RGV MN V HP GG H H GK +T R GRKV
Sbjct: 173 VKAGKAYYKYKARNKFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKV 227
>sp|A0B9W7|RL2_METTP 50S ribosomal protein L2P OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rpl2p PE=3 SV=1
Length = 236
Score = 194 bits (493), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 106/238 (44%), Positives = 147/238 (61%), Gaps = 10/238 (4%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAV 60
MG+ I +Q +G G+ HR A ++ + F+ ++G+V DI+HDP R AP+A+
Sbjct: 1 MGKRIISQNRGKGTPTYRAPSHRYRA-DIKHIKFSGD--LVRGIVEDIMHDPARTAPVAL 57
Query: 61 VHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKT 120
V N K+ +A EG Y GQ + CG A +Q GN +P+ +PEG +CN+E K
Sbjct: 58 VRLEN-----GEKQYVLATEGTYIGQEIACGPAAEIQPGNTLPLASIPEGMPICNIESKP 112
Query: 121 GDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPIL 180
G G+ ARASG Y ++AH D T V+LPSG K + A +G+VAGGGR +KP++
Sbjct: 113 GHGGQFARASGVYGILVAH--DVGATVVQLPSGEMKWLNPNCLATIGVVAGGGRTEKPLV 170
Query: 181 KAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
KAG++ YKY++K WP+VRGVAMN V+HP GGG QH G+ TV RGT GRKV +
Sbjct: 171 KAGKSFYKYRSKAVKWPRVRGVAMNAVDHPFGGGGRQHPGRPKTVSRGTPPGRKVGSI 228
>sp|O59421|RL2_PYRHO 50S ribosomal protein L2P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl2p PE=3 SV=1
Length = 239
Score = 192 bits (489), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/236 (45%), Positives = 147/236 (62%), Gaps = 10/236 (4%)
Query: 1 MGRVIRAQRKGAGS-VFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ + QR+G GS FRS + +GA K L++ + ++GVV +I+HDPGR AP+A
Sbjct: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDK-TIRGVVEEIMHDPGRTAPVA 59
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
V F N ++L IAPEG+ GQ +Y G A ++IGN +P+ +PEGT + N+E
Sbjct: 60 RVKFEN-----GMEKLIIAPEGLLVGQEIYIGPDAPVEIGNTLPLAKIPEGTYIYNIEGV 114
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G+ RA G YA V++ D + V+LPSG K RA +G+VAGGGR++KP+
Sbjct: 115 PGDGGKYVRAGGTYALVVSREKD--KVIVQLPSGELKAFDPNCRATIGVVAGGGRLEKPL 172
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
+KAG+A+YKYKA+ WP RGV MN V HP GG H H GK +T R GRKV
Sbjct: 173 VKAGKAYYKYKARNKFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKV 227
>sp|Q9V1T8|RL2_PYRAB 50S ribosomal protein L2P OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=rpl2p PE=3 SV=1
Length = 239
Score = 192 bits (488), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/236 (46%), Positives = 146/236 (61%), Gaps = 10/236 (4%)
Query: 1 MGRVIRAQRKGAGS-VFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ + QR+G GS FRS + +GA K L++ + L+GVV +I+HDPGR AP+A
Sbjct: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDK-TLRGVVEEIMHDPGRTAPVA 59
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
V F N ++L IAPEG+ GQ +Y G A + IGN +P+ +PEGT V N+E
Sbjct: 60 RVRFEN-----GMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G+ RA G YA V++ D + V+LPSG K RA +G+VAGGGR++KP+
Sbjct: 115 PGDGGKYVRAGGTYALVVSREKD--KVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
+KAG+A+YKYKA+ WP RGV MN V HP GG H H GK +T R GRKV
Sbjct: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKV 227
>sp|C5A283|RL2_THEGJ 50S ribosomal protein L2P OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=rpl2p PE=3 SV=1
Length = 239
Score = 192 bits (488), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/236 (46%), Positives = 148/236 (62%), Gaps = 10/236 (4%)
Query: 1 MGRVIRAQRKGAGSV-FRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ + QR+G G+ FR+ + +GA K L+ + L+GVV +I+HDPGR AP+A
Sbjct: 1 MGKSLIQQRRGKGTTTFRAPSHRYRGAVKYVPLNIV-KEKTLRGVVEEILHDPGRTAPVA 59
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
V F + K+L +APEG+ GQ +Y G +A + IGN +P+ +PEGT V N+E
Sbjct: 60 RVKFED-----GTKKLILAPEGVLVGQEIYIGPEAPIAIGNTLPLAKIPEGTYVYNIEGV 114
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G+ RA G YA V++ D + V+LPSG K RA +G+VAGGGR++KPI
Sbjct: 115 PGDGGKYVRAGGTYALVVSRERD--KVIVQLPSGELKQFKPECRATIGVVAGGGRLEKPI 172
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
+KAG+A+Y KA+ WPK RGV MN V HPHGG H HIG+ STV R GRKV
Sbjct: 173 VKAGKAYYIAKARNRFWPKPRGVKMNAVNHPHGGKEH-HIGRPSTVSRRAPPGRKV 227
>sp|Q5JDH2|RL2_PYRKO 50S ribosomal protein L2P OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rpl2p PE=3 SV=1
Length = 239
Score = 192 bits (488), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/236 (46%), Positives = 148/236 (62%), Gaps = 10/236 (4%)
Query: 1 MGRVIRAQRKGAGSV-FRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ + QR+G G+ FR+ + +GA + L+ + L+GVV +I+HDPGR AP+A
Sbjct: 1 MGKSLIQQRRGKGTTTFRAPSHRYRGAVRYVPLNLVQER-TLRGVVEEILHDPGRTAPVA 59
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
V F + K+L IAPEG+ GQ +Y G +A + IGN +P+ +PEGT V ++E
Sbjct: 60 RVKFED-----GTKKLIIAPEGVLVGQEIYIGPEAPIAIGNTLPLAKIPEGTYVYDIEGV 114
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G+ RA G YA V++ D + V+LPSG K RA +G+VAGGGR++KPI
Sbjct: 115 PGDGGKYVRAGGTYALVVSREKD--KVIVQLPSGELKAFNPMCRATIGVVAGGGRLEKPI 172
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
+KAG+A+Y KA+ WPK RGV MN V HPHGG H HIG+ STV R GRKV
Sbjct: 173 VKAGKAYYIAKARNRFWPKPRGVKMNAVNHPHGGKEH-HIGRPSTVSRRAPPGRKV 227
>sp|A5UL86|RL2_METS3 50S ribosomal protein L2P OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rpl2p PE=3 SV=1
Length = 241
Score = 191 bits (486), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/239 (44%), Positives = 144/239 (60%), Gaps = 8/239 (3%)
Query: 1 MGRVIRAQRKGAGSVFRSHNKHR-KGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ + QR+G G+ HR K + RS D E+ G +KG+V DI+HDP R AP+A
Sbjct: 1 MGKRLIIQRRGRGTPAHRVASHRFKDKIRYRSYDALEKEGSIKGIVTDIVHDPARTAPIA 60
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
V F N K+ +APE + + CG A ++ GN +P+ +PEGT + ++E
Sbjct: 61 EVKFEN-----GEKKFILAPESIQIDDEIECGISAPIKFGNTLPLAEIPEGTPIYDIENT 115
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD GR R+SG YA++I H D ++ V+LPSG K + RA +G+VAGGGR +KP
Sbjct: 116 PGDGGRFVRSSGTYASLITH--DANQSVVELPSGELKYLNPRCRASIGVVAGGGRKEKPF 173
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVL 238
LKAG + YKAK + VRGVAMN V+HPHGGGN QH G+ +TV R GRKV +
Sbjct: 174 LKAGNRWHAYKAKGKKFMTVRGVAMNAVDHPHGGGNRQHPGRPTTVSRHAPPGRKVGSI 232
>sp|B1L707|RL2_KORCO 50S ribosomal protein L2P OS=Korarchaeum cryptofilum (strain OPF8)
GN=rpl2p PE=3 SV=1
Length = 245
Score = 191 bits (485), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 152/236 (64%), Gaps = 11/236 (4%)
Query: 1 MGRVIRAQRKGAGSV-FRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ I QR+G G + FRS + H K AP D + ++GV+++I+H+PGR P++
Sbjct: 1 MGKRILVQRRGRGGIQFRSKD-HLKIAPARYPQDGMD--NLMRGVIKEILHEPGRHTPIS 57
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
+V N +F +I PEG+Y GQ + GK A ++ GNV+P+ +P+G++VCN+E +
Sbjct: 58 LVELENGQEF-----YYIPPEGVYEGQEIQIGKGAEVKTGNVLPLSEIPDGSLVCNVEIR 112
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G++AR SG YA V +H D + ++LPS +K++ + RA +G+VAG GRI+KP
Sbjct: 113 PGDGGKIARRSGTYAIVFSHEGD--KVILRLPSRKEKLVDARCRATIGVVAGSGRIEKPF 170
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
+KAG +Y + WP VRGVAMNPV HPHGGG+H+ GK +TV R G+KV
Sbjct: 171 MKAGIKYYHERTHPKRWPVVRGVAMNPVSHPHGGGSHKRPGKPTTVARTAPPGQKV 226
>sp|Q9YFN1|RL2_AERPE 50S ribosomal protein L2P OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl2p PE=3
SV=1
Length = 238
Score = 187 bits (474), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 110/236 (46%), Positives = 146/236 (61%), Gaps = 12/236 (5%)
Query: 1 MGRVIRAQRKGAGS-VFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ +R QR G G+ +RS G K L L+G V ++IHDPGR PLA
Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLSGDT----LRGKVVELIHDPGRYVPLA 56
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
V + +F L A EGMY GQ + G A + GN++P+G +PEGT V N+E +
Sbjct: 57 RVVREDGVEF-----LMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELR 111
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G+LAR +G+YA V+ +T ++LPSG K +P+ +RA +GI AG GRI+KPI
Sbjct: 112 PGDGGKLARQAGSYALVVGRA--GAKTILRLPSGKDKEVPNDSRATIGIPAGAGRIEKPI 169
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
+KAG A++K+K K WP+VRGVAMN V+HP GGG HQH G+ STV R GRKV
Sbjct: 170 MKAGFAYHKWKVKARKWPRVRGVAMNAVDHPFGGGRHQHKGRPSTVARTAPPGRKV 225
>sp|Q9UXA5|RL2_SULSO 50S ribosomal protein L2P OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rpl2p PE=3 SV=1
Length = 238
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/236 (46%), Positives = 145/236 (61%), Gaps = 13/236 (5%)
Query: 1 MGRVIRAQRKGAGS-VFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MG+ + QR G GS FR+ R G K+R + G+ G V DI+H+PG AP+A
Sbjct: 1 MGKNLLQQRAGKGSPTFRNPGWLRIG--KVR---YPNIFGHFIGKVIDIVHNPGMNAPVA 55
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
+V N KF L A +G+ Q + GK + + GNV+ +G PEGTIVCN+EE
Sbjct: 56 LVKLENGTKF-----LMQAIQGLVVNQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEEN 110
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G+ AR++G+YA V+ + D R ++LPS K + + RA VGIVAGGG I+KP+
Sbjct: 111 FGDGGKYARSAGSYAVVVGKSGD--RVLIRLPSDKIKAVSNKARATVGIVAGGGVIEKPL 168
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
LKAG ++KYK K WP VRGVAMN V+HPHGGG HQ + + STV R GRKV
Sbjct: 169 LKAGANYWKYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKV 224
>sp|Q3IMY5|RL2_NATPD 50S ribosomal protein L2P OS=Natronomonas pharaonis (strain DSM
2160 / ATCC 35678) GN=rpl2p PE=3 SV=1
Length = 243
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 140/236 (59%), Gaps = 11/236 (4%)
Query: 1 MGRVIRAQRKGAG-SVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLA 59
MGR I QR+G G S FR+ + K R++ E + G V DI HDP R APLA
Sbjct: 1 MGRRILGQRRGRGTSTFRAPSHRYKADLSHRNV---EESDLVTGEVVDIEHDPARSAPLA 57
Query: 60 VVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEK 119
V F + ++ L +APEG+ G + G A + GN MP+ +PEG VCN+E +
Sbjct: 58 DVQFDD-----GDRRLVLAPEGVTVGDEIQIGVSAEIAPGNTMPLAEIPEGVPVCNVERQ 112
Query: 120 TGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPI 179
GD G+ ARASG AT++ H D V+LPSG + + RA +G+VAGGGR +KP
Sbjct: 113 PGDGGKFARASGVSATLLTH--DRNAAVVQLPSGEMRRLSPECRATIGVVAGGGRTEKPF 170
Query: 180 LKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
+KAG H+K K++ WP+VRGVAMN V+HP GGG QH GK +V R T GRKV
Sbjct: 171 VKAGNKHHKMKSRGGKWPRVRGVAMNAVDHPFGGGGRQHPGKPKSVSRDTPPGRKV 226
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,444,240
Number of Sequences: 539616
Number of extensions: 4541643
Number of successful extensions: 12502
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 9105
Number of HSP's gapped (non-prelim): 1078
length of query: 248
length of database: 191,569,459
effective HSP length: 114
effective length of query: 134
effective length of database: 130,053,235
effective search space: 17427133490
effective search space used: 17427133490
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)