Query psy13963
Match_columns 402
No_of_seqs 274 out of 2290
Neff 11.1
Searched_HMMs 29240
Date Fri Aug 16 16:02:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13963.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13963hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 2E-47 6.8E-52 360.4 12.4 306 10-316 32-486 (510)
2 2rh1_A Beta-2-adrenergic recep 100.0 1.9E-44 6.6E-49 339.7 24.7 306 11-317 41-477 (500)
3 3uon_A Human M2 muscarinic ace 100.0 1.5E-44 5E-49 338.4 20.6 309 7-319 20-460 (467)
4 3rze_A Histamine H1 receptor, 100.0 3.6E-44 1.2E-48 334.4 16.3 309 7-319 5-445 (452)
5 3vw7_A Proteinase-activated re 100.0 1.8E-44 6.2E-49 339.3 12.7 307 7-318 17-466 (484)
6 4amj_A Beta-1 adrenergic recep 100.0 8.1E-44 2.8E-48 316.0 15.2 291 10-318 11-302 (315)
7 3sn6_R Lysozyme, beta-2 adrene 100.0 1.6E-43 5.3E-48 334.8 17.0 306 10-316 182-490 (514)
8 2ks9_A Substance-P receptor; w 100.0 1.1E-41 3.9E-46 308.4 26.5 276 12-316 34-321 (364)
9 4dkl_A MU-type opioid receptor 100.0 7.9E-44 2.7E-48 333.2 12.2 298 10-315 17-454 (464)
10 3eml_A Human adenosine A2A rec 100.0 3E-43 1E-47 331.3 16.0 308 7-318 18-468 (488)
11 2lnl_A C-X-C chemokine recepto 100.0 8E-42 2.7E-46 300.3 22.5 277 7-318 8-295 (296)
12 3pbl_A D(3) dopamine receptor, 100.0 1.3E-42 4.5E-47 326.4 18.0 302 8-319 36-474 (481)
13 3v2y_A Sphingosine 1-phosphate 100.0 9.8E-42 3.4E-46 322.5 22.6 296 11-317 64-493 (520)
14 1u19_A Rhodopsin; G protein-co 100.0 7.6E-42 2.6E-46 307.8 18.6 277 11-317 39-324 (349)
15 2z73_A Rhodopsin; visual pigme 100.0 6.3E-42 2.2E-46 318.6 18.4 290 11-317 35-332 (448)
16 4ea3_A Fusion protein of nocic 100.0 2.6E-41 8.9E-46 312.9 18.5 273 11-315 126-408 (434)
17 4eiy_A Adenosine receptor A2A/ 100.0 2.9E-42 9.8E-47 321.1 11.5 306 11-318 32-427 (447)
18 3odu_A C-X-C chemokine recepto 100.0 1.6E-42 5.5E-47 327.5 8.8 302 8-318 46-494 (502)
19 2koe_A Human cannabinoid recep 98.5 1.2E-08 4.2E-13 58.7 0.7 35 281-315 2-36 (40)
20 1hll_A Alpha-2A adrenergic rec 98.5 2.2E-08 7.4E-13 54.4 0.6 30 96-125 2-31 (32)
21 2ki9_A Cannabinoid receptor 2; 97.9 1.9E-06 6.5E-11 46.7 0.7 29 242-270 1-29 (33)
22 2lot_A Apelin receptor; membra 95.7 0.00027 9.3E-09 44.0 -3.6 30 12-41 30-59 (64)
23 2z73_A Rhodopsin; visual pigme 85.2 5.6 0.00019 35.9 10.2 31 13-43 34-64 (448)
24 4ea3_A Fusion protein of nocic 84.6 22 0.00074 31.8 14.7 29 15-43 127-155 (434)
25 2ket_A Cathelicidin-6; antimic 70.0 3.5 0.00012 19.2 2.0 14 305-318 4-17 (27)
26 4dkl_A MU-type opioid receptor 63.9 29 0.00098 31.1 8.8 56 2-59 6-61 (464)
27 3sn6_R Lysozyme, beta-2 adrene 49.1 1.5E+02 0.0053 26.8 12.2 34 10-43 179-212 (514)
28 2ks1_B Epidermal growth factor 43.4 19 0.00065 20.3 2.4 21 1-21 2-23 (44)
29 3arc_M Photosystem II reaction 35.8 51 0.0018 17.5 3.8 24 175-198 6-29 (36)
30 3uon_A Human M2 muscarinic ace 30.7 2.8E+02 0.0095 24.4 12.3 35 7-41 17-51 (467)
31 2ks9_A Substance-P receptor; w 29.7 2.5E+02 0.0087 23.6 15.9 24 295-318 296-319 (364)
32 3arc_I Photosystem II reaction 24.7 69 0.0023 17.1 2.4 15 14-28 12-26 (38)
33 2rdd_B UPF0092 membrane protei 22.1 1E+02 0.0034 16.4 4.0 24 186-209 7-31 (37)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=2e-47 Score=360.38 Aligned_cols=306 Identities=19% Similarity=0.304 Sum_probs=224.8
Q ss_pred CChhHHHHHHHHHHHHHhhhheeeeeecCcCcc---ccchhHhHhHHHHHHHhHHHhhhHHHHHHhc--Ccccccccccc
Q psy13963 10 SPPPGVFLSLLIFLSIAGNILVCAAIYTDRGLR---RIGNLFLASLAIADLFVAALVMSFALVNDLL--GYWMFGPQFCD 84 (402)
Q Consensus 10 ~~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r---~~~~~ll~~lai~dll~~l~~~~~~~~~~~~--~~~~~~~~~C~ 84 (402)
.+++.+++.+++++|++||+++++++.+++++| +++|+|++|||++|++.+++.+|+.+..... +.|.+++.+|+
T Consensus 32 ~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C~ 111 (510)
T 4grv_A 32 KVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCR 111 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHHH
Confidence 356778889999999999999999998877655 6789999999999999999999988877654 46999999999
Q ss_pred hhhhhhhHhhhHHHHHHHHHHHHHHhHhhCCCCcCcccchhhHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccccCCC
Q psy13963 85 TWIAFDVMCSTSSILNLCAISLDRYIHIKDPLRYSRWVTRKVAVGTIACIWLLAALISFVPISLGLHRPPVPVELYEGEL 164 (402)
Q Consensus 85 ~~~~~~~~~~~~s~~~~~~iaidRy~ai~~p~~y~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (402)
+..++..++..+|++++++|++|||+||++|++|+..++++++..+++++|++++++++|+++......... +......
T Consensus 112 ~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~-~~~~~~~ 190 (510)
T 4grv_A 112 GYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSA-DGTHPGG 190 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECSS-SSCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhccccccc-CCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999998886543221111 1111122
Q ss_pred CcccccCC----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCC-----------------------
Q psy13963 165 PTCALDLT----PTYAVVSSCISFYVPCIVMLGIYLRLYCYAQKHVKSIRAVTRPLP----------------------- 217 (402)
Q Consensus 165 ~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----------------------- 217 (402)
..|...+. ..|..+..++.+++|+++++++|+.|++.++++.+..........
T Consensus 191 ~~c~~~~~~~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (510)
T 4grv_A 191 LVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTK 270 (510)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCTHHHHHHHHTCCEEEEEECTTSCEEEETTEECCC
T ss_pred cccccccccchhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccccccccccCC
Confidence 23443332 345566677889999999999999999999876543211100000
Q ss_pred ------------CCCCCCCCC-----------------------------------------------------------
Q psy13963 218 ------------SSSSLPRPS----------------------------------------------------------- 226 (402)
Q Consensus 218 ------------~~~~~~~~~----------------------------------------------------------- 226 (402)
.........
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (510)
T 4grv_A 271 SPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFT 350 (510)
T ss_dssp SSSHHHHHHSCCC---CCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCSHHHHHHHHHHHHHHHHHHTTCH
T ss_pred CCCCCccccccCcCCCCCCCCcccCCccccccCCCCcccccccccCCCCCCCcCccccccccccCCccccCCCCCCCCCC
Confidence 000000000
Q ss_pred --------------------------------------CCccccccCCccccccchhhhhhHHHHHHHHhhhhhHHHHHH
Q psy13963 227 --------------------------------------PALHITTTSSPYHVSDHKAAITVGVIMGTFLLCWVPFFCVNI 268 (402)
Q Consensus 227 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~ 268 (402)
+.........+..++|+|++||+++++++|++||+|+.++.+
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~erk~~k~L~iVv~~F~iCWlPf~i~~l 430 (510)
T 4grv_A 351 NSLRMLNNKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSGSVQALRHGVLVARAVVIAFVVCWLPYHVRRL 430 (510)
T ss_dssp HHHHHHTTTCHHHHHHHHHSSCSCCSSHHHHHHHHHHHHHSSSGGGTTSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCCcccccccccccccccCCccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000011122334457889999999999999999999999999
Q ss_pred HHHhhcCCCc--------hhHHHHHHHHhhhccccchhHHhhcChHHHHHHHHHHh
Q psy13963 269 IAAFCKTCIP--------GYWFKILTWLGYSNSAFNPIIYSIYNKEFRDAFKRILI 316 (402)
Q Consensus 269 ~~~~~~~~~~--------~~~~~~~~~l~~~~~~~np~iy~~~~~~fR~~~~~~~~ 316 (402)
+..+.+.... .++..++.+|+++|+++||+||+++|++||++++++|+
T Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~FR~aFk~iL~ 486 (510)
T 4grv_A 431 MFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANFRQVFLSTLA 486 (510)
T ss_dssp HHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC------
T ss_pred HHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 8877544321 23556778899999999999999999999999999994
No 2
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=1.9e-44 Score=339.67 Aligned_cols=306 Identities=34% Similarity=0.624 Sum_probs=238.8
Q ss_pred ChhHHHHHHHHHHHHHhhhheeeeeecCcCccccchhHhHhHHHHHHHhHHHhhhHHHHHHhcCcccccccccchhhhhh
Q psy13963 11 PPPGVFLSLLIFLSIAGNILVCAAIYTDRGLRRIGNLFLASLAIADLFVAALVMSFALVNDLLGYWMFGPQFCDTWIAFD 90 (402)
Q Consensus 11 ~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~~~~~ll~~lai~dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~ 90 (402)
.+.++++.+++++|++||+++++++.+++++|++.|+|++|||++|++.+++.+|..+.....+.|.++...|++..++.
T Consensus 41 ~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~~~~~ 120 (500)
T 2rh1_A 41 VGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSID 120 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHHHHHH
Confidence 45678889999999999999999999999999999999999999999999989999888888889999999999999999
Q ss_pred hHhhhHHHHHHHHHHHHHHhHhhCCCCcCcccchhhHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccccCCCCcc-cc
Q psy13963 91 VMCSTSSILNLCAISLDRYIHIKDPLRYSRWVTRKVAVGTIACIWLLAALISFVPISLGLHRPPVPVELYEGELPTC-AL 169 (402)
Q Consensus 91 ~~~~~~s~~~~~~iaidRy~ai~~p~~y~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 169 (402)
.++..++++++++|++|||+||++|++|+++++++++..+++++|+++++++++|++..+..........+.....| ..
T Consensus 121 ~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~~ 200 (500)
T 2rh1_A 121 VLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDF 200 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecccccCcceeccccccccc
Confidence 99999999999999999999999999999999999999999999999999997776554433221111111111122 22
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCC----------CCCCC---------C---------
Q psy13963 170 DLTPTYAVVSSCISFYVPCIVMLGIYLRLYCYAQKHVKSIRAVTRP----------LPSSS---------S--------- 221 (402)
Q Consensus 170 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------~~~~~---------~--------- 221 (402)
.....|.....++.+++|+++++++|+.|++.++++.++.+..... ..... .
T Consensus 201 ~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (500)
T 2rh1_A 201 FTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKS 280 (500)
T ss_dssp CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHTCCEEEEEECTTSCEEEETTEEEESCSCHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccCCCCCCCCCCccccccccc
Confidence 2334566677778889999999999999999999887662110000 00000 0
Q ss_pred -------CCCCCCC----------c-------------------------------------------------c-----
Q psy13963 222 -------LPRPSPA----------L-------------------------------------------------H----- 230 (402)
Q Consensus 222 -------~~~~~~~----------~-------------------------------------------------~----- 230 (402)
....... . +
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (500)
T 2rh1_A 281 ELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQK 360 (500)
T ss_dssp HHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTT
T ss_pred ccccccCCCCCCccchhhhhhcccCCccccccccccCCCCCCCCCcccccccchhhcccCCCCccccccccCchhhhhcc
Confidence 0000000 0 0
Q ss_pred -------------------------------ccccCCccccccchhhhhhHHHHHHHHhhhhhHHHHHHHHHhhcCCCch
Q psy13963 231 -------------------------------ITTTSSPYHVSDHKAAITVGVIMGTFLLCWVPFFCVNIIAAFCKTCIPG 279 (402)
Q Consensus 231 -------------------------------~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~ 279 (402)
......+..++|+|++|++++++++|++||+|+.++.++..+.+...+.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~~~~~~ 440 (500)
T 2rh1_A 361 RWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRK 440 (500)
T ss_dssp CHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSCH
T ss_pred cccccccccccccccCCCCcccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccH
Confidence 0001112235789999999999999999999999999998887666677
Q ss_pred hHHHHHHHHhhhccccchhHHhhcChHHHHHHHHHHhh
Q psy13963 280 YWFKILTWLGYSNSAFNPIIYSIYNKEFRDAFKRILIT 317 (402)
Q Consensus 280 ~~~~~~~~l~~~~~~~np~iy~~~~~~fR~~~~~~~~~ 317 (402)
.++.+..++.++|+++||+||++ +++||++++++++|
T Consensus 441 ~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af~~il~~ 477 (500)
T 2rh1_A 441 EVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLCL 477 (500)
T ss_dssp HHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhhcchhhhc-cHHHHHHHHHHHhh
Confidence 88899999999999999999985 99999999999843
No 3
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=100.00 E-value=1.5e-44 Score=338.42 Aligned_cols=309 Identities=29% Similarity=0.497 Sum_probs=245.8
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhheeeeeecCcCccccchhHhHhHHHHHHHhHHHhhhHHHHHHhcCcccccccccchh
Q psy13963 7 PFSSPPPGVFLSLLIFLSIAGNILVCAAIYTDRGLRRIGNLFLASLAIADLFVAALVMSFALVNDLLGYWMFGPQFCDTW 86 (402)
Q Consensus 7 ~~~~~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~~~~~ll~~lai~dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~ 86 (402)
+....+..+++.+++++|++||+++++++.+++++|++.++|++|||++|++.+++.+|..+.....+.|.++...|++.
T Consensus 20 ~~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 99 (467)
T 3uon_A 20 TFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLW 99 (467)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHH
Confidence 34456788889999999999999999999999999999999999999999999999999999888889999999999999
Q ss_pred hhhhhHhhhHHHHHHHHHHHHHHhHhhCCCCcCcccchhhHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccccCCCCc
Q psy13963 87 IAFDVMCSTSSILNLCAISLDRYIHIKDPLRYSRWVTRKVAVGTIACIWLLAALISFVPISLGLHRPPVPVELYEGELPT 166 (402)
Q Consensus 87 ~~~~~~~~~~s~~~~~~iaidRy~ai~~p~~y~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (402)
.++..++..++.+++++|++|||++|++|++|+...+++++..+++++|++++++++|+++........ .......
T Consensus 100 ~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 175 (467)
T 3uon_A 100 LALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGV----RTVEDGE 175 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC----CCCCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc----cCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999887653221100 0112223
Q ss_pred ccccC--CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCC-----------------------
Q psy13963 167 CALDL--TPTYAVVSSCISFYVPCIVMLGIYLRLYCYAQKHVKSIRAVTRPLPSSSS----------------------- 221 (402)
Q Consensus 167 ~~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----------------------- 221 (402)
|..++ ...+.....++.+++|+++++++|+.|++.++++.++.+........+..
T Consensus 176 C~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (467)
T 3uon_A 176 CYIQFFSNAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSL 255 (467)
T ss_dssp CCCGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHSCCEEEEEECTTSCEEEETTEECCCCSSH
T ss_pred ceeecCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhcccccceeeccchhhcccccCcccccCCcc
Confidence 44332 33466777788899999999999999999999887644322111100000
Q ss_pred ------------CCCCCC--------------------------------------------------------------
Q psy13963 222 ------------LPRPSP-------------------------------------------------------------- 227 (402)
Q Consensus 222 ------------~~~~~~-------------------------------------------------------------- 227 (402)
.+....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (467)
T 3uon_A 256 NAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLR 335 (467)
T ss_dssp HHHHHHHHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHGGGHHHHH
T ss_pred cccccccccccccCCCCcccccccccccccccchhhcccccCCCCCccccccccccccccccceeeccccCCCccccccc
Confidence 000000
Q ss_pred ---------------------------------CccccccCCccccccchhhhhhHHHHHHHHhhhhhHHHHHHHHHhhc
Q psy13963 228 ---------------------------------ALHITTTSSPYHVSDHKAAITVGVIMGTFLLCWVPFFCVNIIAAFCK 274 (402)
Q Consensus 228 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~ 274 (402)
.........+..++|+|+++++++++++|++||+|+.+..++..+.+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~ 415 (467)
T 3uon_A 336 MLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYPPPSREKKVTRTILAILLAFIITWAPYNVMVLINTFCA 415 (467)
T ss_dssp HHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred hhhhcCccccccccccccccCCCCcccccccchhhcccccccccchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 00011112223457899999999999999999999999999988877
Q ss_pred CCCchhHHHHHHHHhhhccccchhHHhhcChHHHHHHHHHHhhhc
Q psy13963 275 TCIPGYWFKILTWLGYSNSAFNPIIYSIYNKEFRDAFKRILITNY 319 (402)
Q Consensus 275 ~~~~~~~~~~~~~l~~~~~~~np~iy~~~~~~fR~~~~~~~~~~~ 319 (402)
......+..+..++.++|+++||+||++++++||++++++++|++
T Consensus 416 ~~~~~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~~ 460 (467)
T 3uon_A 416 PCIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLMCHY 460 (467)
T ss_dssp TTSCHHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHCC---
T ss_pred cccchHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHHhhhc
Confidence 667788899999999999999999999999999999999995543
No 4
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=100.00 E-value=3.6e-44 Score=334.38 Aligned_cols=309 Identities=30% Similarity=0.555 Sum_probs=241.0
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhheeeeeecCcCccccchhHhHhHHHHHHHhHHHhhhHHHHHHhcCcccccccccchh
Q psy13963 7 PFSSPPPGVFLSLLIFLSIAGNILVCAAIYTDRGLRRIGNLFLASLAIADLFVAALVMSFALVNDLLGYWMFGPQFCDTW 86 (402)
Q Consensus 7 ~~~~~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~~~~~ll~~lai~dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~ 86 (402)
+....+..+++.+++++|++||+++++++.+++++|++.|+|++|||++|++.+++.+|..+.....+.|.++...|++.
T Consensus 5 ~~~~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 84 (452)
T 3rze_A 5 SPQLMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFW 84 (452)
T ss_dssp ----CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHH
Confidence 44567888999999999999999999999999999999999999999999999999999999988888999999999999
Q ss_pred hhhhhHhhhHHHHHHHHHHHHHHhHhhCCCCcCcccchhhHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccccCCCCc
Q psy13963 87 IAFDVMCSTSSILNLCAISLDRYIHIKDPLRYSRWVTRKVAVGTIACIWLLAALISFVPISLGLHRPPVPVELYEGELPT 166 (402)
Q Consensus 87 ~~~~~~~~~~s~~~~~~iaidRy~ai~~p~~y~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (402)
.++..++..++.+++++|++|||++|++|++|++.++++++..+++++|++++++++|.+........ ........
T Consensus 85 ~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~----~~~~~~~~ 160 (452)
T 3rze_A 85 LSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQ----TSVRREDK 160 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHCCCC-----------CCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccc----cccCCCCe
Confidence 99999999999999999999999999999999999999999999999999999998775432211111 11123334
Q ss_pred ccccCC--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCC------------------------
Q psy13963 167 CALDLT--PTYAVVSSCISFYVPCIVMLGIYLRLYCYAQKHVKSIRAVTRPLPSSS------------------------ 220 (402)
Q Consensus 167 ~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------------------------ 220 (402)
|..++. ..|.....++.+++|+++++++|+.|++.++++.++............
T Consensus 161 C~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (452)
T 3rze_A 161 CETDFYDVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSL 240 (452)
T ss_dssp SCCSCTTCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHCEEEEEEECTTSCEEEEETEECSSCSSH
T ss_pred ecCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHhhhhhhhhhhhcccCCcccccccccccccCCCC
Confidence 544333 346666778889999999999999999999887554322111000000
Q ss_pred -----------CCCCCCC-C------------------------------------------------------------
Q psy13963 221 -----------SLPRPSP-A------------------------------------------------------------ 228 (402)
Q Consensus 221 -----------~~~~~~~-~------------------------------------------------------------ 228 (402)
....... .
T Consensus 241 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (452)
T 3rze_A 241 NAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLR 320 (452)
T ss_dssp HHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHCHHHHTSCHHHHH
T ss_pred CcccccccCCCCCCCCccccCCcccchhcCCCcccccCcccccccCCcccCCCccccccccccccccCCCCCCccccCcc
Confidence 0000000 0
Q ss_pred ----------------------------------ccccccCCccccccchhhhhhHHHHHHHHhhhhhHHHHHHHHHhhc
Q psy13963 229 ----------------------------------LHITTTSSPYHVSDHKAAITVGVIMGTFLLCWVPFFCVNIIAAFCK 274 (402)
Q Consensus 229 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~ 274 (402)
.....+..+..++++|+++++++++++|++||+|+.+..++..+.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~ 400 (452)
T 3rze_A 321 MLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCK 400 (452)
T ss_dssp HHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hhhhcCCccccccccCCccCCCCCcccchhhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc
Confidence 0000011123457899999999999999999999999999988877
Q ss_pred CCCchhHHHHHHHHhhhccccchhHHhhcChHHHHHHHHHHhhhc
Q psy13963 275 TCIPGYWFKILTWLGYSNSAFNPIIYSIYNKEFRDAFKRILITNY 319 (402)
Q Consensus 275 ~~~~~~~~~~~~~l~~~~~~~np~iy~~~~~~fR~~~~~~~~~~~ 319 (402)
......+..+..++.++|+++||+||++++++||++++++++|++
T Consensus 401 ~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~~ 445 (452)
T 3rze_A 401 NCCNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHIRS 445 (452)
T ss_dssp CCSCTTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTC--
T ss_pred ccccHHHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHHHHhcc
Confidence 767777888999999999999999999999999999999996553
No 5
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.8e-44 Score=339.29 Aligned_cols=307 Identities=16% Similarity=0.163 Sum_probs=217.8
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhheeeeeecCcCccccchhHhHhHHHHHHHhHHHhhhHHHHHHhcCcccccccccchh
Q psy13963 7 PFSSPPPGVFLSLLIFLSIAGNILVCAAIYTDRGLRRIGNLFLASLAIADLFVAALVMSFALVNDLLGYWMFGPQFCDTW 86 (402)
Q Consensus 7 ~~~~~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~~~~~ll~~lai~dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~ 86 (402)
+....+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.++...+..+.....+.|.++...|++.
T Consensus 17 ~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 96 (484)
T 3vw7_A 17 SWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYYFSGSDWQFGSELCRFV 96 (484)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTSCCCSCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhHHhHH
Confidence 34457788999999999999999999999999999999999999999999999765444444444445899999999999
Q ss_pred hhhhhHhhhHHHHHHHHHHHHHHhHhhCCCCcCcccchhhHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccccCCCCc
Q psy13963 87 IAFDVMCSTSSILNLCAISLDRYIHIKDPLRYSRWVTRKVAVGTIACIWLLAALISFVPISLGLHRPPVPVELYEGELPT 166 (402)
Q Consensus 87 ~~~~~~~~~~s~~~~~~iaidRy~ai~~p~~y~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (402)
.++..++..+|++++++||+|||+||++|++|+..++++++..+++++|++++++++|+++........ ......
T Consensus 97 ~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~-----~~~~~~ 171 (484)
T 3vw7_A 97 TAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVP-----GLGITT 171 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEET-----TTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccC-----CCCCce
Confidence 999999999999999999999999999999999999999999999999999999998888654322111 111223
Q ss_pred ccccCCc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCC---CCCCCCC-------
Q psy13963 167 CALDLTP--------TYAVVSSCISFYVPCIVMLGIYLRLYCYAQKHVKSIRAVTRPLPSSSS---LPRPSPA------- 228 (402)
Q Consensus 167 ~~~~~~~--------~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~------- 228 (402)
|...+.. .|.....++.+++|+++++++|+.|++.++++.++.+........... ..+....
T Consensus 172 C~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~~~~~~ 251 (484)
T 3vw7_A 172 CHDVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLL 251 (484)
T ss_dssp ESSSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHCCEEEEEECTTSCEEEETTEEE
T ss_pred eeccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhHHHHhhhhccchhhhhccccccceeeeccccc
Confidence 4333221 145556678899999999999999999999887533211100000000 0000000
Q ss_pred --------------------------------------------------------------------------------
Q psy13963 229 -------------------------------------------------------------------------------- 228 (402)
Q Consensus 229 -------------------------------------------------------------------------------- 228 (402)
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 331 (484)
T 3vw7_A 252 TKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAG 331 (484)
T ss_dssp ESSSCHHHHHHHHHHHHTSCCSSBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCcchhcccccccccccccCCCCCCcccccccccccccccccccccccccCcccccccccccchhhccccccCcccccc
Confidence
Q ss_pred -----c-----------------------------------cccccCCccccccchhhhhhHHHHHHHHhhhhhHHHHHH
Q psy13963 229 -----L-----------------------------------HITTTSSPYHVSDHKAAITVGVIMGTFLLCWVPFFCVNI 268 (402)
Q Consensus 229 -----~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~ 268 (402)
. ..+.+.....++++|++|++++++++|++||+|+.++.+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icwlP~~i~~l 411 (484)
T 3vw7_A 332 FTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYANRSKKSRALFLSAAVFCIFIICFGPTNVLLI 411 (484)
T ss_dssp THHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred chhhhhhhhccchhhhhhhhhhhhhhccCcccccCccceeecchhccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 0 000000013456789999999999999999999999999
Q ss_pred HHHhhcCC-C----chhHHHHHHHHhhhccccchhHHhhcChHHHHHHHHHHhhh
Q psy13963 269 IAAFCKTC-I----PGYWFKILTWLGYSNSAFNPIIYSIYNKEFRDAFKRILITN 318 (402)
Q Consensus 269 ~~~~~~~~-~----~~~~~~~~~~l~~~~~~~np~iy~~~~~~fR~~~~~~~~~~ 318 (402)
+..+.... . ...+..++.++.++|+++||+||++++++||++++++++|+
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~~ll~~~ 466 (484)
T 3vw7_A 412 AHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVYSILCCK 466 (484)
T ss_dssp HHHHTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC-----------
T ss_pred HHHHHhccccchhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHHHHHHHHhhc
Confidence 88654221 1 22556688899999999999999999999999999999544
No 6
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=100.00 E-value=8.1e-44 Score=315.97 Aligned_cols=291 Identities=40% Similarity=0.765 Sum_probs=236.7
Q ss_pred CChhHHHHHHHHHHHHHhhhheeeeeecCcCccccchhHhHhHHHHHHHhHHHhhhHHHHHHhcCcccccccccchhhhh
Q psy13963 10 SPPPGVFLSLLIFLSIAGNILVCAAIYTDRGLRRIGNLFLASLAIADLFVAALVMSFALVNDLLGYWMFGPQFCDTWIAF 89 (402)
Q Consensus 10 ~~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~~~~~ll~~lai~dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 89 (402)
+....+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++..+|..+.....+.|.+++..|++..++
T Consensus 11 ~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~ 90 (315)
T 4amj_A 11 EAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSL 90 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHHHHH
Confidence 45677889999999999999999999999999999999999999999999988899888888888999999999999999
Q ss_pred hhHhhhHHHHHHHHHHHHHHhHhhCCCCcCcccchhhHHHHHHHHHHHHHHHHHHhHhhcCCCCCCcccccc-CCCCccc
Q psy13963 90 DVMCSTSSILNLCAISLDRYIHIKDPLRYSRWVTRKVAVGTIACIWLLAALISFVPISLGLHRPPVPVELYE-GELPTCA 168 (402)
Q Consensus 90 ~~~~~~~s~~~~~~iaidRy~ai~~p~~y~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 168 (402)
..++..+|.+++++|++|||++|++|++|++..+++++...++++|+++++++++|.+.............+ .....+.
T Consensus 91 ~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 170 (315)
T 4amj_A 91 DVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCD 170 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCccccccccccch
Confidence 999999999999999999999999999999999999999999999999999998888765443332221111 1122222
Q ss_pred ccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCCCCCCCCCccccccCCccccccchhhhh
Q psy13963 169 LDLTPTYAVVSSCISFYVPCIVMLGIYLRLYCYAQKHVKSIRAVTRPLPSSSSLPRPSPALHITTTSSPYHVSDHKAAIT 248 (402)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (402)
......+.....++.+++|+++++++|..+++.++++.++.....+. ...++..++++|.+++
T Consensus 171 ~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~k~~~~ 233 (315)
T 4amj_A 171 FVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKR-----------------KTSRVMLMREHKALKT 233 (315)
T ss_dssp CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC-----------------------------CHHHHHHHHHHHHH
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccc-----------------ccchhhhhhhhhHHHH
Confidence 33444566666677788999999999999999999876654321110 1111223467899999
Q ss_pred hHHHHHHHHhhhhhHHHHHHHHHhhcCCCchhHHHHHHHHhhhccccchhHHhhcChHHHHHHHHHHhhh
Q psy13963 249 VGVIMGTFLLCWVPFFCVNIIAAFCKTCIPGYWFKILTWLGYSNSAFNPIIYSIYNKEFRDAFKRILITN 318 (402)
Q Consensus 249 ~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~np~iy~~~~~~fR~~~~~~~~~~ 318 (402)
+++++++|++||+|+.+..++..+.+...+.....+..++.++|+++||++|+ ++++||++++++++|+
T Consensus 234 ~~~~~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~~~ 302 (315)
T 4amj_A 234 LGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAFP 302 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSSCHHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHhCCC
Confidence 99999999999999999999988876666777888888999999999999999 9999999999999443
No 7
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=100.00 E-value=1.6e-43 Score=334.76 Aligned_cols=306 Identities=35% Similarity=0.644 Sum_probs=241.4
Q ss_pred CChhHHHHHHHHHHHHHhhhheeeeeecCcCccccchhHhHhHHHHHHHhHHHhhhHHHHHHhcCcccccccccchhhhh
Q psy13963 10 SPPPGVFLSLLIFLSIAGNILVCAAIYTDRGLRRIGNLFLASLAIADLFVAALVMSFALVNDLLGYWMFGPQFCDTWIAF 89 (402)
Q Consensus 10 ~~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~~~~~ll~~lai~dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 89 (402)
..+.++++.+++++|++||+++++++.+++++|++.|+|++|||++|++.+++.+|..+.....+.|.++...|++..++
T Consensus 182 ~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~l 261 (514)
T 3sn6_R 182 VVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSI 261 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhHHHH
Confidence 34677889999999999999999999999999999999999999999999998999998888888999999999999999
Q ss_pred hhHhhhHHHHHHHHHHHHHHhHhhCCCCcCcccchhhHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccccCCCCcc-c
Q psy13963 90 DVMCSTSSILNLCAISLDRYIHIKDPLRYSRWVTRKVAVGTIACIWLLAALISFVPISLGLHRPPVPVELYEGELPTC-A 168 (402)
Q Consensus 90 ~~~~~~~s~~~~~~iaidRy~ai~~p~~y~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 168 (402)
..++..+|.+++++|++|||++|++|++|+..++++++..+++++|+++++++++|.+..+..........+.....| .
T Consensus 262 ~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~c~~~~~~~~ 341 (514)
T 3sn6_R 262 DVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCD 341 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CHHHHHHHSSSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCcccceeecccccc
Confidence 999999999999999999999999999999999999999999999999999998887665444322211111111222 2
Q ss_pred ccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCC--CCCCCCCccccccCCccccccchhh
Q psy13963 169 LDLTPTYAVVSSCISFYVPCIVMLGIYLRLYCYAQKHVKSIRAVTRPLPSSSS--LPRPSPALHITTTSSPYHVSDHKAA 246 (402)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (402)
......|.....++.+++|+++++++|+.|++.++++.++..........+.. ........+..+...+..++++|++
T Consensus 342 ~~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 421 (514)
T 3sn6_R 342 FFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGLRRSSKFCLKEHKAL 421 (514)
T ss_dssp CCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------------------CHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhhhHHHHHHH
Confidence 23344577777888899999999999999999999988776554333211111 1111111112223334455788999
Q ss_pred hhhHHHHHHHHhhhhhHHHHHHHHHhhcCCCchhHHHHHHHHhhhccccchhHHhhcChHHHHHHHHHHh
Q psy13963 247 ITVGVIMGTFLLCWVPFFCVNIIAAFCKTCIPGYWFKILTWLGYSNSAFNPIIYSIYNKEFRDAFKRILI 316 (402)
Q Consensus 247 ~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~np~iy~~~~~~fR~~~~~~~~ 316 (402)
+++++++++|++||+|+.+..++..+.+......+..+..++.++|+++||+||+ ++++||++++++++
T Consensus 422 ~~l~~iv~~F~lcwlP~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~ 490 (514)
T 3sn6_R 422 KTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLC 490 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhC
Confidence 9999999999999999999999888766666677888889999999999999999 99999999999884
No 8
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=100.00 E-value=1.1e-41 Score=308.37 Aligned_cols=276 Identities=22% Similarity=0.397 Sum_probs=223.3
Q ss_pred hhHHHHHHHHHHHHHhhhheeeeeecCcCccccchhHhHhHHHHHHHhHHHhhhHHHHHHhcCcccccccccchhhhhhh
Q psy13963 12 PPGVFLSLLIFLSIAGNILVCAAIYTDRGLRRIGNLFLASLAIADLFVAALVMSFALVNDLLGYWMFGPQFCDTWIAFDV 91 (402)
Q Consensus 12 ~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~~~~~ll~~lai~dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~ 91 (402)
+..+++.+++++|++||+++++++.+++++|++.|++++|||++|++.+++.+|..+.....+.|.+++..|++..++..
T Consensus 34 ~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~ 113 (364)
T 2ks9_A 34 LWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPI 113 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhHHHHHH
Confidence 34677889999999999999999999999999999999999999999988888888887778889999999999999999
Q ss_pred HhhhHHHHHHHHHHHHHHhHhhCCCCcCcccchhhHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccccCCCCcccccC
Q psy13963 92 MCSTSSILNLCAISLDRYIHIKDPLRYSRWVTRKVAVGTIACIWLLAALISFVPISLGLHRPPVPVELYEGELPTCALDL 171 (402)
Q Consensus 92 ~~~~~s~~~~~~iaidRy~ai~~p~~y~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (402)
++..++.+++++|++|||+||++|++|+ .+++++...++++|++++++++|+......... .....|..++
T Consensus 114 ~~~~~s~~~l~~isidRy~aI~~P~~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~-------~~~~~C~~~~ 184 (364)
T 2ks9_A 114 AAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQGYYSTTETM-------PSRVVCMIEW 184 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCTTS--CCHHHHHHHHHHHHHHHHHHHTTTTTTSCCCBC-------TTCSSBCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccc--cccchHHHHHHHHHHHHHHHHhHHHHHhhheec-------CCCCEEeecC
Confidence 9999999999999999999999999986 588889999999999999999876643322211 1222333322
Q ss_pred C--------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCCCCCCCCCccccccCCccccccc
Q psy13963 172 T--------PTYAVVSSCISFYVPCIVMLGIYLRLYCYAQKHVKSIRAVTRPLPSSSSLPRPSPALHITTTSSPYHVSDH 243 (402)
Q Consensus 172 ~--------~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (402)
. ..|.....++.+++|+++++++|..|++.++++++.... ....++..++++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~--------------------~~~~~~~~~~~~ 244 (364)
T 2ks9_A 185 PEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDS--------------------SDRYHEQVSAKR 244 (364)
T ss_dssp SCCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSSS--------------------SSCSSHHHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc--------------------chhhhhhHHhhh
Confidence 1 235555667788999999999999999877654321110 011122345678
Q ss_pred hhhhhhHHHHHHHHhhhhhHHHHHHHHHhhcCC----CchhHHHHHHHHhhhccccchhHHhhcChHHHHHHHHHHh
Q psy13963 244 KAAITVGVIMGTFLLCWVPFFCVNIIAAFCKTC----IPGYWFKILTWLGYSNSAFNPIIYSIYNKEFRDAFKRILI 316 (402)
Q Consensus 244 ~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~np~iy~~~~~~fR~~~~~~~~ 316 (402)
|+++++++++++|++||+|+.+..++..+.+.. .......+..++.++|+++||+||++++++||++++++++
T Consensus 245 k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~ 321 (364)
T 2ks9_A 245 KVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFR 321 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 999999999999999999999998887764432 2345667778899999999999999999999999999983
No 9
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=100.00 E-value=7.9e-44 Score=333.20 Aligned_cols=298 Identities=21% Similarity=0.368 Sum_probs=233.2
Q ss_pred CChhHHHHHHHHHHHHHhhhheeeeeecCcCccccchhHhHhHHHHHHHhHHHhhhHHHHHHhcCcccccccccchhhhh
Q psy13963 10 SPPPGVFLSLLIFLSIAGNILVCAAIYTDRGLRRIGNLFLASLAIADLFVAALVMSFALVNDLLGYWMFGPQFCDTWIAF 89 (402)
Q Consensus 10 ~~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~~~~~ll~~lai~dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 89 (402)
.++..+++.+++++|++||+++++++.+++++|++.++|++|||++|++.++. +|..+.....+.|.++...|++..++
T Consensus 17 ~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~~~~~ 95 (464)
T 4dkl_A 17 AITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKIVISI 95 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhhHHHH
Confidence 46778889999999999999999999999999999999999999999998866 88888888888999999999999999
Q ss_pred hhHhhhHHHHHHHHHHHHHHhHhhCCCCcCcccchhhHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccccCCCCcccc
Q psy13963 90 DVMCSTSSILNLCAISLDRYIHIKDPLRYSRWVTRKVAVGTIACIWLLAALISFVPISLGLHRPPVPVELYEGELPTCAL 169 (402)
Q Consensus 90 ~~~~~~~s~~~~~~iaidRy~ai~~p~~y~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (402)
..++..++.+++++|++|||++|++|++|++.++++++..+++++|++++++++|+++....... .....|..
T Consensus 96 ~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~-------~~~~~c~~ 168 (464)
T 4dkl_A 96 DYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYR-------QGSIDCTL 168 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEE-------TTEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeeccc-------CCCceEEe
Confidence 99999999999999999999999999999999999999999999999999999888864333221 11122332
Q ss_pred cC-------CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCCC--------------------
Q psy13963 170 DL-------TPTYAVVSSCISFYVPCIVMLGIYLRLYCYAQKHVKSIRAVTRPLPSSSSL-------------------- 222 (402)
Q Consensus 170 ~~-------~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-------------------- 222 (402)
.+ ...+.....++.+++|+++++++|+.|++.++++++..+............
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (464)
T 4dkl_A 169 TFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRNIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSP 248 (464)
T ss_dssp CCSSSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCSHHHHHHHHHCCEEEEEECTTSCEEEETTEEEESSS
T ss_pred ecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccccccccccCCCCCccccccccccCCC
Confidence 22 223556667778899999999999999999987766433221100000000
Q ss_pred ---------------CCCC-------------------------------------------------------------
Q psy13963 223 ---------------PRPS------------------------------------------------------------- 226 (402)
Q Consensus 223 ---------------~~~~------------------------------------------------------------- 226 (402)
....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (464)
T 4dkl_A 249 SLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNS 328 (464)
T ss_dssp CSHHHHHHHHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHTSCHHHHHHHHHHHHHHCHHHHHTCHHH
T ss_pred ccccccccccccccccccceecCCccccccccCCcccccccccCCCCCccccCcccccchhhhhccccCCCCCccccccc
Confidence 0000
Q ss_pred ----------------------------------CCccccccCCccccccchhhhhhHHHHHHHHhhhhhHHHHHHHHHh
Q psy13963 227 ----------------------------------PALHITTTSSPYHVSDHKAAITVGVIMGTFLLCWVPFFCVNIIAAF 272 (402)
Q Consensus 227 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~ 272 (402)
..........+..++|+|+++++++++++|++||+|+.+..++..+
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~ 408 (464)
T 4dkl_A 329 LRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKAL 408 (464)
T ss_dssp HHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhcccchhhcccccccccccCccccceeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 0000011123345678899999999999999999999999998877
Q ss_pred hcCCC---chhHHHHHHHHhhhccccchhHHhhcChHHHHHHHHHH
Q psy13963 273 CKTCI---PGYWFKILTWLGYSNSAFNPIIYSIYNKEFRDAFKRIL 315 (402)
Q Consensus 273 ~~~~~---~~~~~~~~~~l~~~~~~~np~iy~~~~~~fR~~~~~~~ 315 (402)
..... ......+..++.++|+++||+||++++++||+++++++
T Consensus 409 ~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~lc 454 (464)
T 4dkl_A 409 ITIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFC 454 (464)
T ss_dssp SCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred hcCCccccchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHHHh
Confidence 54322 23455677789999999999999999999999999975
No 10
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=100.00 E-value=3e-43 Score=331.35 Aligned_cols=308 Identities=27% Similarity=0.420 Sum_probs=235.9
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhheeeeeecCcCccccchhHhHhHHHHHHHhHHHhhhHHHHHHhcCcccccccccchh
Q psy13963 7 PFSSPPPGVFLSLLIFLSIAGNILVCAAIYTDRGLRRIGNLFLASLAIADLFVAALVMSFALVNDLLGYWMFGPQFCDTW 86 (402)
Q Consensus 7 ~~~~~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~~~~~ll~~lai~dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~ 86 (402)
.....+..+++++++++|++||+++++++.+++++|++.++|++|||++|++.+++.+|..+... ..|..+...|++.
T Consensus 18 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~--~~~~~~~~~C~~~ 95 (488)
T 3eml_A 18 IMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFI 95 (488)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHT--TCCEECHHHHHHH
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccccchHHHHH
Confidence 34456788999999999999999999999999999999999999999999999888888777543 3678889999999
Q ss_pred hhhhhHhhhHHHHHHHHHHHHHHhHhhCCCCcCcccchhhHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccccCCCCc
Q psy13963 87 IAFDVMCSTSSILNLCAISLDRYIHIKDPLRYSRWVTRKVAVGTIACIWLLAALISFVPISLGLHRPPVPVELYEGELPT 166 (402)
Q Consensus 87 ~~~~~~~~~~s~~~~~~iaidRy~ai~~p~~y~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (402)
.++..++..++++++++|++|||++|++|++|++.++++++..+++++|++++++++|+++........... ......
T Consensus 96 ~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~--~~~~~~ 173 (488)
T 3eml_A 96 ACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEG--KNHSQG 173 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC---------CCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccccccccccc--cccccc
Confidence 999999999999999999999999999999999999999999999999999999998888643332221110 111122
Q ss_pred ccccC----------CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCCC--------------
Q psy13963 167 CALDL----------TPTYAVVSSCISFYVPCIVMLGIYLRLYCYAQKHVKSIRAVTRPLPSSSSL-------------- 222 (402)
Q Consensus 167 ~~~~~----------~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-------------- 222 (402)
|..+. ...+.....++.+++|+++++++|+.|++.++++.++.+............
T Consensus 174 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (488)
T 3eml_A 174 CGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGH 253 (488)
T ss_dssp SCTTCEECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTCCEEEEEECTTSCEEEETTE
T ss_pred cccccceeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhccccccchhhccccccceeccccc
Confidence 22211 122444557788899999999999999999998876654322111000000
Q ss_pred ---------------------CCCCCC-----------------------------------------------------
Q psy13963 223 ---------------------PRPSPA----------------------------------------------------- 228 (402)
Q Consensus 223 ---------------------~~~~~~----------------------------------------------------- 228 (402)
......
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (488)
T 3eml_A 254 LLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGV 333 (488)
T ss_dssp EEESSSCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHSCHHHHHHHHHHHHHHCHHHH
T ss_pred cCCCCccccccccccccCCCCCCCCCCChhhhccCcccCccccccccCCCCCCCCCcCCcchHHHhhhhccccCCCCCCc
Confidence 000000
Q ss_pred -------------------------------------------ccccccCCccccccchhhhhhHHHHHHHHhhhhhHHH
Q psy13963 229 -------------------------------------------LHITTTSSPYHVSDHKAAITVGVIMGTFLLCWVPFFC 265 (402)
Q Consensus 229 -------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i 265 (402)
........+..++++|+++++++++++|++||+|+.+
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~icw~P~~i 413 (488)
T 3eml_A 334 AGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHI 413 (488)
T ss_dssp TTCHHHHHHHHTTCHHHHHHHHTTSHHHHHCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcchhhhhccccccccCcccccCcccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 0000001112357899999999999999999999999
Q ss_pred HHHHHHhhcC--CCchhHHHHHHHHhhhccccchhHHhhcChHHHHHHHHHHhhh
Q psy13963 266 VNIIAAFCKT--CIPGYWFKILTWLGYSNSAFNPIIYSIYNKEFRDAFKRILITN 318 (402)
Q Consensus 266 ~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~np~iy~~~~~~fR~~~~~~~~~~ 318 (402)
+.++..+... .....+..+..++.++|+++||+||++++++||++++++++|.
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~~~ 468 (488)
T 3eml_A 414 INCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSH 468 (488)
T ss_dssp HHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred HHHHHhccCccccccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHHhhc
Confidence 9998887653 4556778889999999999999999999999999999999553
No 11
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=100.00 E-value=8e-42 Score=300.30 Aligned_cols=277 Identities=25% Similarity=0.344 Sum_probs=218.1
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhheeeeeecCcCccccchhHhHhHHHHHHHhHHHhhhHHHHHHhcCcccccccccchh
Q psy13963 7 PFSSPPPGVFLSLLIFLSIAGNILVCAAIYTDRGLRRIGNLFLASLAIADLFVAALVMSFALVNDLLGYWMFGPQFCDTW 86 (402)
Q Consensus 7 ~~~~~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~~~~~ll~~lai~dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~ 86 (402)
+....+..+++.+++++|++||+++++++.++|++|+++|+|++|||++|++.++. .|....... .+|..++..|+..
T Consensus 8 ~~~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l~-~p~~~~~~~-~~~~~~~~~c~~~ 85 (296)
T 2lnl_A 8 TLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALT-LPIWAASKV-NGWIFGTFLCKVV 85 (296)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHHH-HHHHHHHHH-SSSCCSSHHHHHH
T ss_pred chhHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHh-hhHHHhhcc-CCCccchhHHHHH
Confidence 34456777888999999999999999999999999999999999999999998754 455554443 5699999999999
Q ss_pred hhhhhHhhhHHHHHHHHHHHHHHhHhhCCCCcCcccchhhHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccccCCC-C
Q psy13963 87 IAFDVMCSTSSILNLCAISLDRYIHIKDPLRYSRWVTRKVAVGTIACIWLLAALISFVPISLGLHRPPVPVELYEGEL-P 165 (402)
Q Consensus 87 ~~~~~~~~~~s~~~~~~iaidRy~ai~~p~~y~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 165 (402)
.++...+..+|.+++++||+|||+||++|++|+... +++...+++++|+++++.++|+................... .
T Consensus 86 ~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~-~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 164 (296)
T 2lnl_A 86 SLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQK-RHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLG 164 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCH-HHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSCCCCSCCS
T ss_pred hhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchhh-hhhhHheehHHHHHHHHHhcchhhcceeecCCCCCceeeeecc
Confidence 999999999999999999999999999999988754 45667788899999999998888655444332211111111 1
Q ss_pred cccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCCCCCCCCCccccccCCccccccchh
Q psy13963 166 TCALDLTPTYAVVSSCISFYVPCIVMLGIYLRLYCYAQKHVKSIRAVTRPLPSSSSLPRPSPALHITTTSSPYHVSDHKA 245 (402)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (402)
.........+......+.+++|+.++..+|..+.+.++++. .++++|.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~~--------------------------------~~~~~k~ 212 (296)
T 2lnl_A 165 NDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAH--------------------------------MGQKHRA 212 (296)
T ss_dssp CCTTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSCC--------------------------------CHHHHTH
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------------------------------hhhhhhH
Confidence 11122233455666778889999999999988765433221 1256889
Q ss_pred hhhhHHHHHHHHhhhhhHHHHHHHHHhhcCCCc----------hhHHHHHHHHhhhccccchhHHhhcChHHHHHHHHHH
Q psy13963 246 AITVGVIMGTFLLCWVPFFCVNIIAAFCKTCIP----------GYWFKILTWLGYSNSAFNPIIYSIYNKEFRDAFKRIL 315 (402)
Q Consensus 246 ~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~~~np~iy~~~~~~fR~~~~~~~ 315 (402)
+|++..++++|++||+|+.+..++..+...... .....++.+++++|+++||+||++++++||+++++++
T Consensus 213 ~~~~~~v~~~f~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ll 292 (296)
T 2lnl_A 213 MRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKIL 292 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHHHHHHHHH
T ss_pred HHHHHHhhhheeeeehHHHHHHHHHHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHh
Confidence 999999999999999999999998877543321 2355678889999999999999999999999999999
Q ss_pred hhh
Q psy13963 316 ITN 318 (402)
Q Consensus 316 ~~~ 318 (402)
+|+
T Consensus 293 ~cr 295 (296)
T 2lnl_A 293 AMH 295 (296)
T ss_dssp HHC
T ss_pred cCC
Confidence 554
No 12
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=326.38 Aligned_cols=302 Identities=31% Similarity=0.566 Sum_probs=234.2
Q ss_pred CCCChhHHHHHHHHHHHHHhhhheeeeeecCcCccccchhHhHhHHHHHHHhHHHhhhHHHHHHhc-Ccccccccccchh
Q psy13963 8 FSSPPPGVFLSLLIFLSIAGNILVCAAIYTDRGLRRIGNLFLASLAIADLFVAALVMSFALVNDLL-GYWMFGPQFCDTW 86 (402)
Q Consensus 8 ~~~~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~~~~~ll~~lai~dll~~l~~~~~~~~~~~~-~~~~~~~~~C~~~ 86 (402)
....+..+++.+++++|++||+++++++.+++++|++.++|++|||++|++.+++.+|..+..... +.|.++...|++.
T Consensus 36 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~ 115 (481)
T 3pbl_A 36 RPHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVF 115 (481)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhH
Confidence 345677788999999999999999999999999999999999999999999998888888776666 6799999999999
Q ss_pred hhhhhHhhhHHHHHHHHHHHHHHhHhhCCCCc---CcccchhhHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccccCC
Q psy13963 87 IAFDVMCSTSSILNLCAISLDRYIHIKDPLRY---SRWVTRKVAVGTIACIWLLAALISFVPISLGLHRPPVPVELYEGE 163 (402)
Q Consensus 87 ~~~~~~~~~~s~~~~~~iaidRy~ai~~p~~y---~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (402)
.++..++..++.+++++|++|||++|++|++| .+..+++++..+++++|++++++++|+++..... ..
T Consensus 116 ~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~---------~~ 186 (481)
T 3pbl_A 116 VTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTT---------GD 186 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCCC---------SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheeccc---------CC
Confidence 99999999999999999999999999999998 6678889999999999999999999877543221 12
Q ss_pred CCcccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCC-----C-C--------------
Q psy13963 164 LPTCALDLTPTYAVVSSCISFYVPCIVMLGIYLRLYCYAQKHVKSIRAVTRPLPSSSS-----L-P-------------- 223 (402)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~-~-------------- 223 (402)
...|... ...+.....++.+++|+++++++|+.|++.++++.++............. . .
T Consensus 187 ~~~C~~~-~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (481)
T 3pbl_A 187 PTVCSIS-NPDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKS 265 (481)
T ss_dssp TTCCSCC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCSSCEECSSSCEEETTTEEEESS
T ss_pred CCccccc-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccchhccccccCcccceeecccccccCC
Confidence 2234433 23466677788899999999999999999999876553211100000000 0 0
Q ss_pred ----------------CCCC------------------------------------------------------------
Q psy13963 224 ----------------RPSP------------------------------------------------------------ 227 (402)
Q Consensus 224 ----------------~~~~------------------------------------------------------------ 227 (402)
....
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (481)
T 3pbl_A 266 PSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTN 345 (481)
T ss_dssp SCHHHHHHHHHHHHTSCCTTCCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHTSCHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred cccccCCCcccchhccCCCceeccCCchhcccCCcccccccccccCccCccccccccccchhccccccccCCCCCCCccc
Confidence 0000
Q ss_pred ------------------------------------CccccccCCccccccchhhhhhHHHHHHHHhhhhhHHHHHHHHH
Q psy13963 228 ------------------------------------ALHITTTSSPYHVSDHKAAITVGVIMGTFLLCWVPFFCVNIIAA 271 (402)
Q Consensus 228 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~ 271 (402)
............++++|+++++++++++|++||+|+.+..++..
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~ 425 (481)
T 3pbl_A 346 SLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNT 425 (481)
T ss_dssp HHHHHHTTCHHHHHHHHHTSHHHHHSHHHHHHHHHHHHHSSSTTSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhccccccccchhhhccccccCCcccccccceeecccccccccccchhhhHHHHHHHHHHHHHHHhhHHHHHHHHHh
Confidence 00001111122346899999999999999999999999999887
Q ss_pred hhcC-CCchhHHHHHHHHhhhccccchhHHhhcChHHHHHHHHHHhhhc
Q psy13963 272 FCKT-CIPGYWFKILTWLGYSNSAFNPIIYSIYNKEFRDAFKRILITNY 319 (402)
Q Consensus 272 ~~~~-~~~~~~~~~~~~l~~~~~~~np~iy~~~~~~fR~~~~~~~~~~~ 319 (402)
+.+. .....+..+..++.++|+++||+||++++++||++++++++|++
T Consensus 426 ~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~~ 474 (481)
T 3pbl_A 426 HCQTCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSCGR 474 (481)
T ss_dssp SCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC--
T ss_pred ccccccCcHHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHHhccC
Confidence 7543 35567888899999999999999999999999999999995443
No 13
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=100.00 E-value=9.8e-42 Score=322.48 Aligned_cols=296 Identities=20% Similarity=0.261 Sum_probs=221.1
Q ss_pred ChhHHHHHHHHHHHHHhhhheeeeeecCcCccccchhHhHhHHHHHHHhHHHhhhHHHHHHhcCcccccccccchhhhhh
Q psy13963 11 PPPGVFLSLLIFLSIAGNILVCAAIYTDRGLRRIGNLFLASLAIADLFVAALVMSFALVNDLLGYWMFGPQFCDTWIAFD 90 (402)
Q Consensus 11 ~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~~~~~ll~~lai~dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~ 90 (402)
.+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.++..+|..+.. ....|.++...|++..++.
T Consensus 64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~~~~~ 142 (520)
T 3v2y_A 64 KLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLREGSM 142 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchHHHHH
Confidence 466788999999999999999999999999999999999999999999998888777655 4567888999999999999
Q ss_pred hHhhhHHHHHHHHHHHHHHhHhhCCCCcCcccchhhHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccccCCCCccccc
Q psy13963 91 VMCSTSSILNLCAISLDRYIHIKDPLRYSRWVTRKVAVGTIACIWLLAALISFVPISLGLHRPPVPVELYEGELPTCALD 170 (402)
Q Consensus 91 ~~~~~~s~~~~~~iaidRy~ai~~p~~y~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (402)
.++..+|++++++|++|||+||+ |++|+..++++++..+++++|++++++++||++..... .....|..+
T Consensus 143 ~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~---------~~~~~C~~~ 212 (520)
T 3v2y_A 143 FVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCI---------SALSSCSTV 212 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCT---------TCGGGBCSS
T ss_pred HHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHeeccc---------cCCCccccc
Confidence 99999999999999999999999 99999999999999999999999999999888543322 122345444
Q ss_pred C--CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh--hcccCCCCC---CCCC-------CC------------
Q psy13963 171 L--TPTYAVVSSCISFYVPCIVMLGIYLRLYCYAQKHVKSI--RAVTRPLPS---SSSL-------PR------------ 224 (402)
Q Consensus 171 ~--~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~---~~~~-------~~------------ 224 (402)
+ ...++.+..++.+++|+++++++|.+|++.++++.... +........ .... ..
T Consensus 213 ~~~~~~~~~~~~~~~~~lPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~t~~~g~~~~~~~~~~~~~~ 292 (520)
T 3v2y_A 213 LPLYHKHYILFCTTVFTLLLLSIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKS 292 (520)
T ss_dssp STTBBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSCEECSSSSEEETTTEECCSSSCHHHHHH
T ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhhhhccccccceeEecccccccccccccccc
Confidence 3 23344455566799999999999999999999886111 000000000 0000 00
Q ss_pred ---------CCC--------------------------------------------------------------------
Q psy13963 225 ---------PSP-------------------------------------------------------------------- 227 (402)
Q Consensus 225 ---------~~~-------------------------------------------------------------------- 227 (402)
...
T Consensus 293 ~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 372 (520)
T 3v2y_A 293 ELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQK 372 (520)
T ss_dssp HHHHHHTSCCTTCCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHHSCHHHHHHHHHHHHHSCHHHHHTCHHHHHHHHTT
T ss_pred hhhhHHHHhcCCcccHHHhhhHHHhccccccccccccccCCCcCCccchhhhHHHHHHHHccCCCccccccccccccccc
Confidence 000
Q ss_pred -----------------------------CccccccCCccccccchhhhhhHHHHHHHHhhhhhHHHHHHHHHhhcCC--
Q psy13963 228 -----------------------------ALHITTTSSPYHVSDHKAAITVGVIMGTFLLCWVPFFCVNIIAAFCKTC-- 276 (402)
Q Consensus 228 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~-- 276 (402)
............++++|+++++++++++|++||+|+.+..++..+....
T Consensus 373 ~~~~~~~~~~~s~~~~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~ 452 (520)
T 3v2y_A 373 RWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTC 452 (520)
T ss_dssp CHHHHHHHHHHSHHHHHSHHHHHHHHHHHHHCSGGGTCSSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTC
T ss_pred chhhHhhhhhccchhhhcccchhhHHHHhhcchhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Confidence 0000001122334688999999999999999999999999988765432
Q ss_pred CchhHHHHHHHHhhhccccchhHHhhcChHHHHHHHHHHhh
Q psy13963 277 IPGYWFKILTWLGYSNSAFNPIIYSIYNKEFRDAFKRILIT 317 (402)
Q Consensus 277 ~~~~~~~~~~~l~~~~~~~np~iy~~~~~~fR~~~~~~~~~ 317 (402)
.......+..+++++|+++||+||.+++++||++++++++|
T Consensus 453 ~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~ 493 (520)
T 3v2y_A 453 DILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGR 493 (520)
T ss_dssp STTTSCHHHHHHHHHGGGTHHHHHHHHCHHHHHHHHTTCCS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 23344566778999999999999999999999999999843
No 14
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=100.00 E-value=7.6e-42 Score=307.75 Aligned_cols=277 Identities=23% Similarity=0.414 Sum_probs=227.2
Q ss_pred ChhHHHHHHHHHHHHHhhhheeeeeecCcCccccchhHhHhHHHHHHHhHHHhhhHHHHHHhcCcccccccccchhhhhh
Q psy13963 11 PPPGVFLSLLIFLSIAGNILVCAAIYTDRGLRRIGNLFLASLAIADLFVAALVMSFALVNDLLGYWMFGPQFCDTWIAFD 90 (402)
Q Consensus 11 ~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~~~~~ll~~lai~dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~ 90 (402)
.+.++++.+++++|++||+++++++.+++++|++.|++++|||++|++.++..+|..+.....+.|.++...|++..++.
T Consensus 39 ~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~ 118 (349)
T 1u19_A 39 SMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFA 118 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHHHHHHH
Confidence 36678889999999999999999999999999999999999999999999988898888888888999999999999999
Q ss_pred hHhhhHHHHHHHHHHHHHHhHhhCCCCcCcccchhhHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccccCCCCccccc
Q psy13963 91 VMCSTSSILNLCAISLDRYIHIKDPLRYSRWVTRKVAVGTIACIWLLAALISFVPISLGLHRPPVPVELYEGELPTCALD 170 (402)
Q Consensus 91 ~~~~~~s~~~~~~iaidRy~ai~~p~~y~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (402)
.++..+|.+++++|++|||+||++|++|++ .+++++...++++|++++++++|+++....... ......|..+
T Consensus 119 ~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~------~~~~~~C~~~ 191 (349)
T 1u19_A 119 TLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIP------EGMQCSCGID 191 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEE------ETTTTEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHheeeCCcccee-eccchhHHHHHHHHHHHHHHHHHHHHheeeeec------cCCceeeccc
Confidence 999999999999999999999999999887 789999999999999999999888754322111 1122234333
Q ss_pred C--------CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCCCCCCCCCccccccCCcccccc
Q psy13963 171 L--------TPTYAVVSSCISFYVPCIVMLGIYLRLYCYAQKHVKSIRAVTRPLPSSSSLPRPSPALHITTTSSPYHVSD 242 (402)
Q Consensus 171 ~--------~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (402)
+ ...|......+.+++|+++++++|.+|++.++++.++.+ ...+..+++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~-----------------------~~~~~~~~~ 248 (349)
T 1u19_A 192 YYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQ-----------------------ESATTQKAE 248 (349)
T ss_dssp CSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSC-----------------------SSSHHHHHH
T ss_pred ccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc-----------------------cchhhHHHH
Confidence 2 223555566677889999999999999887766533211 011223467
Q ss_pred chhhhhhHHHHHHHHhhhhhHHHHHHHHHhhcC-CCchhHHHHHHHHhhhccccchhHHhhcChHHHHHHHHHHhh
Q psy13963 243 HKAAITVGVIMGTFLLCWVPFFCVNIIAAFCKT-CIPGYWFKILTWLGYSNSAFNPIIYSIYNKEFRDAFKRILIT 317 (402)
Q Consensus 243 ~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~np~iy~~~~~~fR~~~~~~~~~ 317 (402)
+|.++++++++++|++||+|+.+..++...... ........+..++..+|+++||+||++++++||++++++++|
T Consensus 249 ~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~c 324 (349)
T 1u19_A 249 KEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCC 324 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhheecCCcccchHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhcc
Confidence 899999999999999999999998887766433 344566778888999999999999999999999999999843
No 15
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=100.00 E-value=6.3e-42 Score=318.62 Aligned_cols=290 Identities=22% Similarity=0.392 Sum_probs=233.8
Q ss_pred ChhHHHHHHHHHHHHHhhhheeeeeecCcCccccchhHhHhHHHHHHHhHHHh-hhHHHHHHhcCcccccccccchhhhh
Q psy13963 11 PPPGVFLSLLIFLSIAGNILVCAAIYTDRGLRRIGNLFLASLAIADLFVAALV-MSFALVNDLLGYWMFGPQFCDTWIAF 89 (402)
Q Consensus 11 ~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~~~~~ll~~lai~dll~~l~~-~~~~~~~~~~~~~~~~~~~C~~~~~~ 89 (402)
.+.++++.+++++|++||+++++++.+++++|++.+++++|||++|++.+++. +|..+.....+.|.++...|++..++
T Consensus 35 ~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~ 114 (448)
T 2z73_A 35 YSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFI 114 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHHHHHH
Confidence 34567888899999999999999999999999999999999999999998774 78777777788899999999999999
Q ss_pred hhHhhhHHHHHHHHHHHHHHhHhhCCCCcCcccchhhHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccccCCCCcccc
Q psy13963 90 DVMCSTSSILNLCAISLDRYIHIKDPLRYSRWVTRKVAVGTIACIWLLAALISFVPISLGLHRPPVPVELYEGELPTCAL 169 (402)
Q Consensus 90 ~~~~~~~s~~~~~~iaidRy~ai~~p~~y~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (402)
..++..+|++++++|++|||++|++|++|+++++++++..+++++|++++++++++++...... .......|..
T Consensus 115 ~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~------~~~~~~~c~~ 188 (448)
T 2z73_A 115 GGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYT------LEGVLCNCSF 188 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEE------ECTTSSSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhceeeee------ecCCceeEec
Confidence 9999999999999999999999999999999999999999999999999999988775432111 1122334443
Q ss_pred cCC------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCCCCCCCCCccccccCCccccccc
Q psy13963 170 DLT------PTYAVVSSCISFYVPCIVMLGIYLRLYCYAQKHVKSIRAVTRPLPSSSSLPRPSPALHITTTSSPYHVSDH 243 (402)
Q Consensus 170 ~~~------~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (402)
++. ..+.....++.+++|+++++++|+.|++.++++.++.....+...... .++..+..++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 257 (448)
T 2z73_A 189 DYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKE-----------LRKAQAGANAEM 257 (448)
T ss_dssp CCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTCCTT-----------HHHHHHHHHHHH
T ss_pred ccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH-----------HHhhhccccHHH
Confidence 332 224445556678899999999999999999998877665433211110 011112234578
Q ss_pred hhhhhhHHHHHHHHhhhhhHHHHHHHHHhhcC-CCchhHHHHHHHHhhhccccchhHHhhcChHHHHHHHHHHhh
Q psy13963 244 KAAITVGVIMGTFLLCWVPFFCVNIIAAFCKT-CIPGYWFKILTWLGYSNSAFNPIIYSIYNKEFRDAFKRILIT 317 (402)
Q Consensus 244 ~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~np~iy~~~~~~fR~~~~~~~~~ 317 (402)
|+++++++++++|++||+|+.+..++..+... ........+..++..+|+++||+||++++++||+++++++++
T Consensus 258 k~~~~l~~iv~~F~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~ 332 (448)
T 2z73_A 258 RLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPW 332 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGCCHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcccCChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999999999888776532 234556777888999999999999999999999999999854
No 16
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=100.00 E-value=2.6e-41 Score=312.91 Aligned_cols=273 Identities=26% Similarity=0.405 Sum_probs=216.6
Q ss_pred ChhHHHHHHHHHHHHHhhhheeeeeecCcCccccchhHhHhHHHHHHHhHHHhhhHHHHHHhcCcccccccccchhhhhh
Q psy13963 11 PPPGVFLSLLIFLSIAGNILVCAAIYTDRGLRRIGNLFLASLAIADLFVAALVMSFALVNDLLGYWMFGPQFCDTWIAFD 90 (402)
Q Consensus 11 ~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~~~~~ll~~lai~dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~ 90 (402)
.+..+++++++++|++||+++++++.+++++|++.|+|++|||++|++. ++.+|..+.....+.|.++...|++..++.
T Consensus 126 ~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 204 (434)
T 4ea3_A 126 VTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKTVIAID 204 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHHHHHHH
Confidence 4566788889999999999999999999999999999999999999998 567788888888888999999999999999
Q ss_pred hHhhhHHHHHHHHHHHHHHhHhhCCCCcCcccchhhHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccccCCCCccccc
Q psy13963 91 VMCSTSSILNLCAISLDRYIHIKDPLRYSRWVTRKVAVGTIACIWLLAALISFVPISLGLHRPPVPVELYEGELPTCALD 170 (402)
Q Consensus 91 ~~~~~~s~~~~~~iaidRy~ai~~p~~y~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (402)
.++..++.+++++|++|||++|++|++|++.++++++..+++++|++++++++|+.+........ ....|...
T Consensus 205 ~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~-------~~~~c~~~ 277 (434)
T 4ea3_A 205 YYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVED-------EEIECLVE 277 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCS-------SCCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEeec-------CceeEEEe
Confidence 99999999999999999999999999999999999999999999999999998887654433221 12234333
Q ss_pred CC-------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCCCCCCCCCccccccCCccccccc
Q psy13963 171 LT-------PTYAVVSSCISFYVPCIVMLGIYLRLYCYAQKHVKSIRAVTRPLPSSSSLPRPSPALHITTTSSPYHVSDH 243 (402)
Q Consensus 171 ~~-------~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (402)
.. ..+.....++.+++|+++++++|..|++.++++++... ..+..++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~------------------------~~~~~~~~~ 333 (434)
T 4ea3_A 278 IPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSG------------------------SREKDRNLR 333 (434)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSCSS------------------------CHHHHHHHH
T ss_pred cCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc------------------------chhhHHHHh
Confidence 22 23556667788899999999999999988876432211 112234678
Q ss_pred hhhhhhHHHHHHHHhhhhhHHHHHHHHHhhcCCCch---hHHHHHHHHhhhccccchhHHhhcChHHHHHHHHHH
Q psy13963 244 KAAITVGVIMGTFLLCWVPFFCVNIIAAFCKTCIPG---YWFKILTWLGYSNSAFNPIIYSIYNKEFRDAFKRIL 315 (402)
Q Consensus 244 ~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~np~iy~~~~~~fR~~~~~~~ 315 (402)
|.++++++++++|++||+|+.+..++..+....... ....+..++.++|+++||+||++++++||+++++++
T Consensus 334 ~~~~~~~~vv~~F~i~w~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~~~~~ 408 (434)
T 4ea3_A 334 RITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFRKFC 408 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998887765433222 345566678899999999999999999999999987
No 17
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=100.00 E-value=2.9e-42 Score=321.06 Aligned_cols=306 Identities=28% Similarity=0.456 Sum_probs=229.3
Q ss_pred ChhHHHHHHHHHHHHHhhhheeeeeecCcCccccchhHhHhHHHHHHHhHHHhhhHHHHHHhcCcccccccccchhhhhh
Q psy13963 11 PPPGVFLSLLIFLSIAGNILVCAAIYTDRGLRRIGNLFLASLAIADLFVAALVMSFALVNDLLGYWMFGPQFCDTWIAFD 90 (402)
Q Consensus 11 ~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~~~~~ll~~lai~dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~ 90 (402)
.+..+++++++++|++||+++++++.+++++|++.|+|++|||++|++.+++.+|..+... ..|..+...|++..++.
T Consensus 32 ~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~--~~~~~~~~~C~~~~~~~ 109 (447)
T 4eiy_A 32 SVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFIACFV 109 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH--TTCEEEHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccCccHHHHHHHHH
Confidence 4677888899999999999999999999999999999999999999999888888777533 35777888999999999
Q ss_pred hHhhhHHHHHHHHHHHHHHhHhhCCCCcCcccchhhHHHHHHHHHHHHHHHHHHhHhhcCCCCCCcccc-----ccCCCC
Q psy13963 91 VMCSTSSILNLCAISLDRYIHIKDPLRYSRWVTRKVAVGTIACIWLLAALISFVPISLGLHRPPVPVEL-----YEGELP 165 (402)
Q Consensus 91 ~~~~~~s~~~~~~iaidRy~ai~~p~~y~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 165 (402)
.++..++.+++++|++|||++|++|++|+.+++++++..+++++|++++++++|+++............ +.....
T Consensus 110 ~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 189 (447)
T 4eiy_A 110 LVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQV 189 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTSCCHHHHHHTTCCTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccccCccccccccccccch
Confidence 999999999999999999999999999999999999999999999999999998875433322211100 011111
Q ss_pred cccccCC---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCC---------------------------
Q psy13963 166 TCALDLT---PTYAVVSSCISFYVPCIVMLGIYLRLYCYAQKHVKSIRAVTRP--------------------------- 215 (402)
Q Consensus 166 ~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~--------------------------- 215 (402)
.|..... ..+.....++.+++|+++++++|+.|++.++++.++.......
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (447)
T 4eiy_A 190 ACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAA 269 (447)
T ss_dssp ECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHH
T ss_pred hhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhccCcCcCCccccchhhhccchhhhcc
Confidence 1211111 1122223445678999999999999999999987654431000
Q ss_pred -------CCCCCCCCCC-CCCccc---------------------------------------------cccCCcccccc
Q psy13963 216 -------LPSSSSLPRP-SPALHI---------------------------------------------TTTSSPYHVSD 242 (402)
Q Consensus 216 -------~~~~~~~~~~-~~~~~~---------------------------------------------~~~~~~~~~~~ 242 (402)
.......... +..... .....+..+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (447)
T 4eiy_A 270 ALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLERARSTLQKE 349 (447)
T ss_dssp HHHHHC---------------CHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCcCCCCCCcccccccCCCCCCCCccchhhhhcccCCcCcccchhhhhcccccchhhccccchhHHHHHH
Confidence 0000000000 000000 01111234578
Q ss_pred chhhhhhHHHHHHHHhhhhhHHHHHHHHHhhcC--CCchhHHHHHHHHhhhccccchhHHhhcChHHHHHHHHHHhhh
Q psy13963 243 HKAAITVGVIMGTFLLCWVPFFCVNIIAAFCKT--CIPGYWFKILTWLGYSNSAFNPIIYSIYNKEFRDAFKRILITN 318 (402)
Q Consensus 243 ~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~np~iy~~~~~~fR~~~~~~~~~~ 318 (402)
+|+++++++++++|++||+|+.+..++..+.+. .....+..+..++.++|+++||+||++++++||++++++++|+
T Consensus 350 ~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~~ 427 (447)
T 4eiy_A 350 VHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSH 427 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHHHHHHH
Confidence 899999999999999999999999988877543 3455678889999999999999999999999999999999655
No 18
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=100.00 E-value=1.6e-42 Score=327.51 Aligned_cols=302 Identities=20% Similarity=0.290 Sum_probs=232.8
Q ss_pred CCCChhHHHHHHHHHHHHHhhhheeeeeecCcCccccchhHhHhHHHHHHHhHHHhhhHHHHHHhcCcccccccccchhh
Q psy13963 8 FSSPPPGVFLSLLIFLSIAGNILVCAAIYTDRGLRRIGNLFLASLAIADLFVAALVMSFALVNDLLGYWMFGPQFCDTWI 87 (402)
Q Consensus 8 ~~~~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~~~~~ll~~lai~dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~ 87 (402)
....+..+++.+++++|++||+++++++.+++++|++.++|++|||++|++.+ +.+|..+..... .|.++...|++..
T Consensus 46 ~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~-~~~~~~~~C~~~~ 123 (502)
T 3odu_A 46 FNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVA-NWYFGNFLCKAVH 123 (502)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT-CCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc-CCcCCchhhhhHH
Confidence 34467788899999999999999999999999999999999999999999995 567777665544 6999999999999
Q ss_pred hhhhHhhhHHHHHHHHHHHHHHhHhhCCCCcCcccchhhHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccccCCCCcc
Q psy13963 88 AFDVMCSTSSILNLCAISLDRYIHIKDPLRYSRWVTRKVAVGTIACIWLLAALISFVPISLGLHRPPVPVELYEGELPTC 167 (402)
Q Consensus 88 ~~~~~~~~~s~~~~~~iaidRy~ai~~p~~y~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (402)
++..++..++++++++|++|||+||++|++|++..+++++..+++++|++++++++|+++....... .....|
T Consensus 124 ~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~-------~~~~~C 196 (502)
T 3odu_A 124 VIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEA-------DDRYIC 196 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEEC-------SSSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheeeecc-------CCceEE
Confidence 9999999999999999999999999999999999999999999999999999999988865433221 122335
Q ss_pred cccCCc-----chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCCCC-------------------
Q psy13963 168 ALDLTP-----TYAVVSSCISFYVPCIVMLGIYLRLYCYAQKHVKSIRAVTRPLPSSSSLP------------------- 223 (402)
Q Consensus 168 ~~~~~~-----~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 223 (402)
...+.. .+.....++.+++|+++++++|+.|++.++++.++...............
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (502)
T 3odu_A 197 DRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKS 276 (502)
T ss_dssp EECCSSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCCHHHHHHHHTCCEEEEEECTTSCEEEETTEEEECS
T ss_pred eecCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhccccccccCCCccccccccccccCcC
Confidence 433322 24555667788999999999999999999987665432211111000000
Q ss_pred -----------------CCCC-----------------------------------------------------------
Q psy13963 224 -----------------RPSP----------------------------------------------------------- 227 (402)
Q Consensus 224 -----------------~~~~----------------------------------------------------------- 227 (402)
....
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (502)
T 3odu_A 277 PSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTN 356 (502)
T ss_dssp SCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHTCCHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred ccccccchhhhcccCcchhhhhhccccccchhhcccccccccccCccccccccCCCCCCcchhhhhhhhhchhhcccCcc
Confidence 0000
Q ss_pred -------------------------------------CccccccCCccccccchhhhhhHHHHHHHHhhhhhHHHHHHHH
Q psy13963 228 -------------------------------------ALHITTTSSPYHVSDHKAAITVGVIMGTFLLCWVPFFCVNIIA 270 (402)
Q Consensus 228 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~ 270 (402)
+...........++++|+++++++++++|++||+|+.++.++.
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~k~~k~l~~vv~~F~icw~P~~i~~~~~ 436 (502)
T 3odu_A 357 SLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPYYIGISID 436 (502)
T ss_dssp HHHHHHHTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhchhhhhccccccccccccCcchhhhccccccccccchhhhhhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 0000000112345689999999999999999999999998887
Q ss_pred HhhcCC----------CchhHHHHHHHHhhhccccchhHHhhcChHHHHHHHHHHhhh
Q psy13963 271 AFCKTC----------IPGYWFKILTWLGYSNSAFNPIIYSIYNKEFRDAFKRILITN 318 (402)
Q Consensus 271 ~~~~~~----------~~~~~~~~~~~l~~~~~~~np~iy~~~~~~fR~~~~~~~~~~ 318 (402)
.+.... ....+..++.++.++|+++||+||++++++||++++++++|+
T Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~ 494 (502)
T 3odu_A 437 SFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSG 494 (502)
T ss_dssp HHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCCCCCHHHHHSSC
T ss_pred HHHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHHHHHHHHHHhccC
Confidence 764211 223455678889999999999999999999999999999554
No 19
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=98.55 E-value=1.2e-08 Score=58.69 Aligned_cols=35 Identities=37% Similarity=0.672 Sum_probs=31.5
Q ss_pred HHHHHHHHhhhccccchhHHhhcChHHHHHHHHHH
Q psy13963 281 WFKILTWLGYSNSAFNPIIYSIYNKEFRDAFKRIL 315 (402)
Q Consensus 281 ~~~~~~~l~~~~~~~np~iy~~~~~~fR~~~~~~~ 315 (402)
++.++.++..+|+++||+||.+.+++||+++++++
T Consensus 2 ~~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~~~~~ 36 (40)
T 2koe_A 2 VFAFASMLCLLNSTVNPIIYALRSKDLRHAFRSMF 36 (40)
T ss_dssp HHHHHHHHHHHHHHSSTTTTBTTBHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHh
Confidence 35677889999999999999999999999999876
No 20
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.48 E-value=2.2e-08 Score=54.38 Aligned_cols=30 Identities=50% Similarity=0.761 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHhHhhCCCCcCcccchh
Q psy13963 96 SSILNLCAISLDRYIHIKDPLRYSRWVTRK 125 (402)
Q Consensus 96 ~s~~~~~~iaidRy~ai~~p~~y~~~~~~~ 125 (402)
+|++++++|++|||++|++|++|...++++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~ 31 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPR 31 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 688999999999999999999998877654
No 21
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=97.93 E-value=1.9e-06 Score=46.70 Aligned_cols=29 Identities=28% Similarity=0.760 Sum_probs=25.1
Q ss_pred cchhhhhhHHHHHHHHhhhhhHHHHHHHH
Q psy13963 242 DHKAAITVGVIMGTFLLCWVPFFCVNIIA 270 (402)
Q Consensus 242 ~~~~~~~~~~i~~~f~i~~~P~~i~~~~~ 270 (402)
|+|.+|++.+++++|++||+|+.+..++.
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~ 29 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHS 29 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHH
Confidence 36788999999999999999999876653
No 22
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=95.72 E-value=0.00027 Score=44.04 Aligned_cols=30 Identities=23% Similarity=0.347 Sum_probs=26.6
Q ss_pred hhHHHHHHHHHHHHHhhhheeeeeecCcCc
Q psy13963 12 PPGVFLSLLIFLSIAGNILVCAAIYTDRGL 41 (402)
Q Consensus 12 ~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~ 41 (402)
+..++|.+++++|++||+++++++.++|..
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~ 59 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGH 59 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEeccc
Confidence 788999999999999999999998877653
No 23
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=85.19 E-value=5.6 Score=35.86 Aligned_cols=31 Identities=13% Similarity=-0.126 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHHHHhhhheeeeeecCcCccc
Q psy13963 13 PGVFLSLLIFLSIAGNILVCAAIYTDRGLRR 43 (402)
Q Consensus 13 ~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~ 43 (402)
..++.++..+++++|-+..++++..-.+.++
T Consensus 34 ~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~ 64 (448)
T 2z73_A 34 YYSLGIFIGICGIIGCGGNGIVIYLFTKTKS 64 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCST
T ss_pred HHHHHHHHHHHHHHHHhhHHHhhhhhhhccc
Confidence 3445566677788888888887775544433
No 24
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=84.57 E-value=22 Score=31.77 Aligned_cols=29 Identities=14% Similarity=0.315 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHhhhheeeeeecCcCccc
Q psy13963 15 VFLSLLIFLSIAGNILVCAAIYTDRGLRR 43 (402)
Q Consensus 15 ~~~~~~~~~gl~~N~~vl~~i~~~~~~r~ 43 (402)
++.++..+++++|=+..++++..-.+.++
T Consensus 127 ~~~~~~~~i~~~gi~gN~lvi~~i~~~~~ 155 (434)
T 4ea3_A 127 TIVGLYLAVCVGGLLGNCLVMYVILRHTK 155 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHHHHeeeeeeecCc
Confidence 34445555666666666665555444333
No 25
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=69.97 E-value=3.5 Score=19.21 Aligned_cols=14 Identities=36% Similarity=0.669 Sum_probs=11.5
Q ss_pred hHHHHHHHHHHhhh
Q psy13963 305 KEFRDAFKRILITN 318 (402)
Q Consensus 305 ~~fR~~~~~~~~~~ 318 (402)
++||+.++++|++.
T Consensus 4 krfrkkfkklfkkl 17 (27)
T 2ket_A 4 KRFRKKFKKLFKKL 17 (27)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 68999999998654
No 26
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=63.93 E-value=29 Score=31.05 Aligned_cols=56 Identities=14% Similarity=0.169 Sum_probs=28.7
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHhhhheeeeeecCcCccccchhHhHhHHHHHHHh
Q psy13963 2 CTITTPFSSPPPGVFLSLLIFLSIAGNILVCAAIYTDRGLRRIGNLFLASLAIADLFV 59 (402)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~~~~~ll~~lai~dll~ 59 (402)
|+..+........++.++..+++++|=+..++++..-.+.++... ..++-+.++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~--~~~~~l~~La~ 61 (464)
T 4dkl_A 6 CPQTGSPSMVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKT--ATNIYIFNLAL 61 (464)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCS--HHHHHHHHHHH
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCC--HHHHHHHHHHH
Confidence 333333444445566666777888888888887766544443332 23455555443
No 27
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=49.10 E-value=1.5e+02 Score=26.83 Aligned_cols=34 Identities=9% Similarity=-0.163 Sum_probs=20.1
Q ss_pred CChhHHHHHHHHHHHHHhhhheeeeeecCcCccc
Q psy13963 10 SPPPGVFLSLLIFLSIAGNILVCAAIYTDRGLRR 43 (402)
Q Consensus 10 ~~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~r~ 43 (402)
.....++.++..+++++|=+..++++..--+.++
T Consensus 179 ~~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~ 212 (514)
T 3sn6_R 179 EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFER 212 (514)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGG
T ss_pred chHHHHHHHHHHHHHHHHHHhHHHhhhheecccc
Confidence 3444555566667777777777776655444333
No 28
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=43.39 E-value=19 Score=20.27 Aligned_cols=21 Identities=24% Similarity=0.374 Sum_probs=9.3
Q ss_pred CcccCC-CCCCChhHHHHHHHH
Q psy13963 1 MCTITT-PFSSPPPGVFLSLLI 21 (402)
Q Consensus 1 ~~~~~~-~~~~~~~~~~~~~~~ 21 (402)
.||.+. +-..+..+++-.++.
T Consensus 2 gCp~~~s~~~~IA~gVVgGv~~ 23 (44)
T 2ks1_B 2 GCPTNGPKIPSIATGMVGALLL 23 (44)
T ss_dssp CCCCCCSCSSSSTHHHHHHHHH
T ss_pred CCCCCCCCcceEEeehhHHHHH
Confidence 376653 333444444433333
No 29
>3arc_M Photosystem II reaction center protein M; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_M* 2axt_M* 3bz1_M* 3bz2_M* 3kzi_M* 3prq_M* 3prr_M* 3a0b_M* 3a0h_M*
Probab=35.81 E-value=51 Score=17.48 Aligned_cols=24 Identities=13% Similarity=0.509 Sum_probs=18.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q psy13963 175 YAVVSSCISFYVPCIVMLGIYLRL 198 (402)
Q Consensus 175 ~~~~~~~~~~~~p~~~~~~~~~~i 198 (402)
...+-..++..+|..++++.|++.
T Consensus 6 l~fiAt~Lfi~iPt~FLlilYvqT 29 (36)
T 3arc_M 6 LGLIATALFVLVPSVFLIILYVQT 29 (36)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhee
Confidence 344556777889999999888876
No 30
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=30.67 E-value=2.8e+02 Score=24.41 Aligned_cols=35 Identities=11% Similarity=-0.046 Sum_probs=20.8
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhheeeeeecCcCc
Q psy13963 7 PFSSPPPGVFLSLLIFLSIAGNILVCAAIYTDRGL 41 (402)
Q Consensus 7 ~~~~~~~~~~~~~~~~~gl~~N~~vl~~i~~~~~~ 41 (402)
+.......++.++..+++++|=+..++++..-.+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~ 51 (467)
T 3uon_A 17 PYKTFEVVFIVLVAGSLSLVTIIGNILVMVSIKVN 51 (467)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHheeeeeec
Confidence 33445555666667777777777777777654433
No 31
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=29.70 E-value=2.5e+02 Score=23.63 Aligned_cols=24 Identities=13% Similarity=0.055 Sum_probs=12.7
Q ss_pred cchhHHhhcChHHHHHHHHHHhhh
Q psy13963 295 FNPIIYSIYNKEFRDAFKRILITN 318 (402)
Q Consensus 295 ~np~iy~~~~~~fR~~~~~~~~~~ 318 (402)
+|+.+--+..--+.+++|+-+++.
T Consensus 296 ~ns~~NPiiY~~~~~~fR~~~~~~ 319 (364)
T 2ks9_A 296 SSTMYNPIIYCCLNDRFRLGFKHA 319 (364)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHH
Confidence 344444334434567777777554
No 32
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=24.74 E-value=69 Score=17.06 Aligned_cols=15 Identities=20% Similarity=0.375 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHhh
Q psy13963 14 GVFLSLLIFLSIAGN 28 (402)
Q Consensus 14 ~~~~~~~~~~gl~~N 28 (402)
.++++.++++|.+.|
T Consensus 12 V~ffvsLFiFGfLsn 26 (38)
T 3arc_I 12 VTFFVLLFVFGFLSG 26 (38)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHccccCC
Confidence 345556677777776
No 33
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=22.15 E-value=1e+02 Score=16.38 Aligned_cols=24 Identities=25% Similarity=0.274 Sum_probs=12.9
Q ss_pred HHHHHH-HHHHHHHHHHHHhhhhhh
Q psy13963 186 VPCIVM-LGIYLRLYCYAQKHVKSI 209 (402)
Q Consensus 186 ~p~~~~-~~~~~~i~~~~~~~~~~~ 209 (402)
+|++++ ++.|..+.+--+|+.+..
T Consensus 7 l~~v~~~~ifYFl~iRPQ~Kr~K~~ 31 (37)
T 2rdd_B 7 LMLVVFGLIFYFMILRPQQKRTKEH 31 (37)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 334433 556777766655555443
Done!