BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13967
(379 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Danio rerio GN=ergic3 PE=2 SV=1
Length = 383
Score = 322 bits (825), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 166/384 (43%), Positives = 230/384 (59%), Gaps = 26/384 (6%)
Query: 6 RLKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDSSRG 65
+LK DA+ K EDF KT G VTI+ L + L ++ Y ELFVD+SRG
Sbjct: 6 KLKQFDAYPKTLEDFRIKTCGGATVTIISGLIMLILFFSELQYYLTKEVHPELFVDTSRG 65
Query: 66 SKLPIHLDIVVPTISCDYLALDAVDSSGEQHLHVEHNIYKRRLDLDGKPIQEPQKEVVNA 125
KL I++D++ P + C YL++DA+D +GEQ L VEHN++K+RLD DG+P+ A
Sbjct: 66 DKLRINIDVIFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGQPV------TTEA 119
Query: 126 VKKKKVTTENGTTTTELEDPNKCGSCYGAETETRKCCNTCNEVKEAYRYKKWALPELDTI 185
K E G DP++C SCYGAET+ KCCNTC++V+EAYR + WA DTI
Sbjct: 120 EKHDLGKEEEGVFDPSTLDPDRCESCYGAETDDLKCCNTCDDVREAYRRRGWAFKTPDTI 179
Query: 186 VQCKNEYSTEKLKNTFTEGCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTSAA 245
QCK E ++K++ EGCQ+YG+LEVN+V+G+FH APG S+ +HVHVHD+Q +
Sbjct: 180 EQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDN 239
Query: 246 FNTTHHIRHLSFGIKLQDDDERRKPLDGTVAKAEEGASMFNYYIKIIPTIYERLDG---- 301
N TH I+HLSFG +D PLD T A + + M+ Y++KI+PTIY + DG
Sbjct: 240 INMTHFIKHLSFG---KDYPGIVNPLDDTNVAAPQASMMYQYFVKIVPTIYVKGDGEVVK 296
Query: 302 ---------SKLGG---GDGGMPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNISGTY 349
K+ GD G+PG+F YELSP+MVK TEK +S H T + I G +
Sbjct: 297 TNQFSVTRHEKIANGLIGDQGLPGVFVLYELSPMMVKFTEKQRSFTHFLTGVCAIIGGVF 356
Query: 350 ITFMLVDALLHSCVKKIS-KVEIG 372
L+D+L++ + I K+E+G
Sbjct: 357 TVAGLIDSLIYHSARAIQKKIELG 380
>sp|Q6NVS2|ERGI3_XENTR Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus tropicalis GN=ergic3 PE=2 SV=1
Length = 384
Score = 321 bits (822), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 163/387 (42%), Positives = 231/387 (59%), Gaps = 25/387 (6%)
Query: 6 RLKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDSSRG 65
RL+ DA+ K EDF KT G VT++ L + L ++ Y ELFVD SRG
Sbjct: 6 RLRQFDAYPKTLEDFRVKTCGGALVTVISGLIMLILFFSELQYYLTKEIYPELFVDKSRG 65
Query: 66 SKLPIHLDIVVPTISCDYLALDAVDSSGEQHLHVEHNIYKRRLDLDGKPIQEPQKEVVNA 125
KL I++D++ P + C YL++DA+D +GEQ L VEHN++K+RLD D KP+
Sbjct: 66 DKLKINIDVIFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDKKPVTSEADRHELG 125
Query: 126 VKKKKVTTENGTTTTELEDPNKCGSCYGAETETRKCCNTCNEVKEAYRYKKWALPELDTI 185
++ V + + DPN+C SCYGAET+ CCNTC++V+EAYR + WA D+I
Sbjct: 126 KSEEHVVFDPKSL-----DPNRCESCYGAETDDFSCCNTCDDVREAYRRRGWAFKTPDSI 180
Query: 186 VQCKNEYSTEKLKNTFTEGCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTSAA 245
QCK E ++K++ EGCQ+YG+LEVN+V+G+FH APG S+ +HVHVHD+Q +
Sbjct: 181 EQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDN 240
Query: 246 FNTTHHIRHLSFGIKLQDDDERRKPLDGTVAKAEEGASMFNYYIKIIPTIYERLDGSKLG 305
N TH IRHLSFG +D PLDG+ A + + MF Y++KI+PT+Y ++DG L
Sbjct: 241 INMTHEIRHLSFG---RDYPGLVNPLDGSSVAAMQSSMMFQYFVKIVPTVYVKVDGEVLR 297
Query: 306 G----------------GDGGMPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNISGTY 349
GD G+PG+F YELSP+MVK+TEK +S H T + I G +
Sbjct: 298 TNQFSVTRHEKMTNGLIGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGVF 357
Query: 350 ITFMLVDALLHSCVKKIS-KVEIGGKT 375
L+D+L++ + I K+E+G T
Sbjct: 358 TVAGLIDSLVYYSTRAIQKKIELGKAT 384
>sp|Q66KH2|ERGI3_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus laevis GN=ergic3 PE=2 SV=1
Length = 389
Score = 318 bits (814), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 165/392 (42%), Positives = 232/392 (59%), Gaps = 30/392 (7%)
Query: 6 RLKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDSSRG 65
RL+ DA+ K EDF KT G VT++ L + L ++ Y ELFVD SRG
Sbjct: 6 RLRQFDAYPKTLEDFRVKTCGGAVVTVISGLIMLILFFSELQYYLTKEVYPELFVDKSRG 65
Query: 66 SKLPIHLDIVVPTISCDYLALDAVDSSGEQHLHVEHNIYKRRLDLDGKPIQEPQKEVVNA 125
KL I++D++ P + C YL++DA+D +GEQ L VEHN++K+RLDLD KP+
Sbjct: 66 DKLKINIDVIFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDLDKKPVTSEADRHELG 125
Query: 126 VKKKKVTTENGTTTTELEDPNKCGSCYGAETETRKCCNTCNEVKEAYRYKKWALPELDTI 185
+++V + T DPN+C SCYGAET+ CCN+C++V+EAYR K WA D+I
Sbjct: 126 KSEEQVVFDPKTL-----DPNRCESCYGAETDDFSCCNSCDDVREAYRRKGWAFKTPDSI 180
Query: 186 VQCKNEYSTEKLKNTFTEGCQIYGYLEVNRVSGSFHIAPGLSYSINHVHV-----HDIQP 240
QCK E ++K++ EGCQ+YG+LEVN+V+G+FH APG S+ +HVHV HD+Q
Sbjct: 181 EQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHAVEIHDLQS 240
Query: 241 YTSAAFNTTHHIRHLSFGIKLQDDDERRKPLDGTVAKAEEGASMFNYYIKIIPTIYERLD 300
+ N TH I+HLSFG +D PLDGT A + + MF Y++KI+PT+Y ++D
Sbjct: 241 FGLDNINMTHEIKHLSFG---KDYPGLVNPLDGTSIVAMQSSMMFQYFVKIVPTVYVKVD 297
Query: 301 GSKLGG----------------GDGGMPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCN 344
G L GD G+PG+F YELSP+MVK TEK +S H T +
Sbjct: 298 GEVLRTNQFSVTRHEKMTNGLIGDQGLPGVFVLYELSPMMVKFTEKHRSFTHFLTGVCAI 357
Query: 345 ISGTYITFMLVDALLHSCVKKIS-KVEIGGKT 375
I G + L+D+L++ + I K+E+G T
Sbjct: 358 IGGVFTVAGLIDSLIYYSTRAIQKKIELGKAT 389
>sp|Q9CQE7|ERGI3_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Mus musculus GN=Ergic3 PE=2 SV=1
Length = 383
Score = 313 bits (802), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 164/386 (42%), Positives = 233/386 (60%), Gaps = 25/386 (6%)
Query: 6 RLKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDSSRG 65
+LK DA+ K EDF KT G VTIV L + L ++ Y EL+VD SRG
Sbjct: 6 KLKQFDAYPKTLEDFRVKTCGGATVTIVSGLLMLLLFLSELQYYLTTEVHPELYVDKSRG 65
Query: 66 SKLPIHLDIVVPTISCDYLALDAVDSSGEQHLHVEHNIYKRRLDLDGKPIQEPQKEVVNA 125
KL I++D++ P + C YL++DA+D +GEQ L VEHN++K+RLD DG P+ + +
Sbjct: 66 DKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKKRLDKDGVPVSSEAER--HE 123
Query: 126 VKKKKVTTENGTTTTELEDPNKCGSCYGAETETRKCCNTCNEVKEAYRYKKWALPELDTI 185
+ K +VT + + DPN+C SCYGAE+E KCCN+C +V+EAYR + WA DTI
Sbjct: 124 LGKVEVTVFDPNSL----DPNRCESCYGAESEDIKCCNSCEDVREAYRRRGWAFKNPDTI 179
Query: 186 VQCKNEYSTEKLKNTFTEGCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTSAA 245
QC+ E ++K++ EGCQ+YG+LEVN+V+G+FH APG S+ +HVHVHD+Q +
Sbjct: 180 EQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDN 239
Query: 246 FNTTHHIRHLSFGIKLQDDDERRKPLDGTVAKAEEGASMFNYYIKIIPTIYERLDGSKLG 305
N TH+I+HLSFG +D PLD T A + + MF Y++K++PT+Y ++DG L
Sbjct: 240 INMTHYIKHLSFG---EDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLR 296
Query: 306 G----------------GDGGMPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNISGTY 349
GD G+PG+F YELSP+MVK+TEK +S H T + I G +
Sbjct: 297 TNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMF 356
Query: 350 ITFMLVDALLHSCVKKISKVEIGGKT 375
L+D+L++ + I K GKT
Sbjct: 357 TVAGLIDSLIYHSARAIQKKIDLGKT 382
>sp|Q9Y282|ERGI3_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Homo sapiens GN=ERGIC3 PE=1 SV=1
Length = 383
Score = 311 bits (797), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 164/386 (42%), Positives = 232/386 (60%), Gaps = 25/386 (6%)
Query: 6 RLKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDSSRG 65
+LK DA+ K EDF KT G VTIV L + L ++ Y EL+VD SRG
Sbjct: 6 KLKQFDAYPKTLEDFRVKTCGGATVTIVSGLLMLLLFLSELQYYLTTEVHPELYVDKSRG 65
Query: 66 SKLPIHLDIVVPTISCDYLALDAVDSSGEQHLHVEHNIYKRRLDLDGKPIQEPQKEVVNA 125
KL I++D++ P + C YL++DA+D +GEQ L VEHN++K+RLD DG P+ + +
Sbjct: 66 DKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGIPVSSEAER--HE 123
Query: 126 VKKKKVTTENGTTTTELEDPNKCGSCYGAETETRKCCNTCNEVKEAYRYKKWALPELDTI 185
+ K +VT + + DP++C SCYGAE E KCCNTC +V+EAYR + WA DTI
Sbjct: 124 LGKVEVTVFDPDSL----DPDRCESCYGAEAEDIKCCNTCEDVREAYRRRGWAFKNPDTI 179
Query: 186 VQCKNEYSTEKLKNTFTEGCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTSAA 245
QC+ E ++K++ EGCQ+YG+LEVN+V+G+FH APG S+ +HVHVHD+Q +
Sbjct: 180 EQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDN 239
Query: 246 FNTTHHIRHLSFGIKLQDDDERRKPLDGTVAKAEEGASMFNYYIKIIPTIYERLDGSKLG 305
N TH+I+HLSFG +D PLD T A + + MF Y++K++PT+Y ++DG L
Sbjct: 240 INMTHYIQHLSFG---EDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLR 296
Query: 306 G----------------GDGGMPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNISGTY 349
GD G+PG+F YELSP+MVK+TEK +S H T + I G +
Sbjct: 297 TNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMF 356
Query: 350 ITFMLVDALLHSCVKKISKVEIGGKT 375
L+D+L++ + I K GKT
Sbjct: 357 TVAGLIDSLIYHSARAIQKKIDLGKT 382
>sp|Q5EAE0|ERGI3_BOVIN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Bos taurus GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 310 bits (793), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 163/387 (42%), Positives = 232/387 (59%), Gaps = 27/387 (6%)
Query: 6 RLKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDSSRG 65
+LK DA+ K EDF KT G VTIV L + L ++ Y EL+VD SRG
Sbjct: 6 KLKQFDAYPKTLEDFRVKTCGGATVTIVSGLLMLLLFLSELQYYLTTEVHPELYVDKSRG 65
Query: 66 SKLPIHLDIVVPTISCDYLALDAVDSSGEQHLHVEHNIYKRRLDLDGKPIQ-EPQKEVVN 124
KL I+++++ P + C YL++DA+D +GEQ L VEHN++K+RLD DG P+ E ++ +
Sbjct: 66 DKLKININVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKKRLDKDGFPVSSEAERHELG 125
Query: 125 AVKKKKVTTENGTTTTELEDPNKCGSCYGAETETRKCCNTCNEVKEAYRYKKWALPELDT 184
V+ K ++ DP++C SCYGAE E KCCN+C +V+EAYR + WA DT
Sbjct: 126 KVEVKVFDPDS-------LDPDRCESCYGAEMEDIKCCNSCEDVREAYRRRGWAFKNPDT 178
Query: 185 IVQCKNEYSTEKLKNTFTEGCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTSA 244
I QC+ E ++K++ EGCQ+YG+LEVN+V+G+FH APG S+ +HVHVHD+Q +
Sbjct: 179 IEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLD 238
Query: 245 AFNTTHHIRHLSFGIKLQDDDERRKPLDGTVAKAEEGASMFNYYIKIIPTIYERLDGSKL 304
N TH+IRHLSFG +D PLD T A + + MF Y++K++PT+Y ++DG L
Sbjct: 239 NINMTHYIRHLSFG---EDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVL 295
Query: 305 GG----------------GDGGMPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNISGT 348
GD G+PG+F YELSP+MVK+TEK +S H T + I G
Sbjct: 296 RTNQFSVTRHEKVANGLMGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGM 355
Query: 349 YITFMLVDALLHSCVKKISKVEIGGKT 375
+ L+D+L++ + I K GKT
Sbjct: 356 FTVAGLIDSLIYHSARAIQKKIDLGKT 382
>sp|Q5R8G3|ERGI3_PONAB Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Pongo abelii GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 309 bits (792), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/386 (42%), Positives = 231/386 (59%), Gaps = 25/386 (6%)
Query: 6 RLKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDSSRG 65
+LK DA+ K EDF KT G VTIV L + L ++ Y EL+VD SRG
Sbjct: 6 KLKQFDAYPKTLEDFRVKTCGGATVTIVSGLLMLLLFLSELQYYLTTEVHPELYVDKSRG 65
Query: 66 SKLPIHLDIVVPTISCDYLALDAVDSSGEQHLHVEHNIYKRRLDLDGKPIQEPQKEVVNA 125
KL I++D++ P + C YL++DA+D +GEQ L VEHN++K+RLD DG P+ + +
Sbjct: 66 DKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGIPVSSEAER--HE 123
Query: 126 VKKKKVTTENGTTTTELEDPNKCGSCYGAETETRKCCNTCNEVKEAYRYKKWALPELDTI 185
+ K +VT + + DP++C SCYGAE E KCCNTC +V+E YR + WA DTI
Sbjct: 124 LGKVEVTVFDPDSL----DPDRCESCYGAEAEDIKCCNTCEDVRETYRRRGWAFKNPDTI 179
Query: 186 VQCKNEYSTEKLKNTFTEGCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTSAA 245
QC+ E ++K++ EGCQ+YG+LEVN+V+G+FH APG S+ +HVHVHD+Q +
Sbjct: 180 EQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDN 239
Query: 246 FNTTHHIRHLSFGIKLQDDDERRKPLDGTVAKAEEGASMFNYYIKIIPTIYERLDGSKLG 305
N TH+I+HLSFG +D PLD T A + + MF Y++K++PT+Y ++DG L
Sbjct: 240 INMTHYIQHLSFG---EDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLR 296
Query: 306 G----------------GDGGMPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNISGTY 349
GD G+PG+F YELSP+MVK+TEK +S H T + I G +
Sbjct: 297 TNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMF 356
Query: 350 ITFMLVDALLHSCVKKISKVEIGGKT 375
L+D+L++ + I K GKT
Sbjct: 357 TVAGLIDSLIYHSARAIQKKIDLGKT 382
>sp|Q4R8X1|ERGI3_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Macaca fascicularis GN=ERGIC3 PE=2 SV=1
Length = 382
Score = 303 bits (777), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/386 (42%), Positives = 231/386 (59%), Gaps = 26/386 (6%)
Query: 6 RLKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDSSRG 65
+LK DA+ K EDF KT G VTIV L + L ++ Y EL+VD SRG
Sbjct: 6 KLKQFDAYPKTLEDFRVKTCGGATVTIVSGLLMLLLFLSELQYYLTTEVHPELYVDKSRG 65
Query: 66 SKLPIHLDIVVPTISCDYLALDAVDSSGEQHLHVEHNIYKRRLDLDGKPIQEPQKEVVNA 125
KL I++D++ P + C YL++DA+D +GEQ L VEHN++K+RLD DG P+ + +
Sbjct: 66 DKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGTPVSSEAER--HE 123
Query: 126 VKKKKVTTENGTTTTELEDPNKCGSCYGAETETRKCCNTCNEVKEAYRYKKWALPELDTI 185
+ K +VT + DP++C SCYGAE E KCCNTC +V+EAYR ++ A DTI
Sbjct: 124 LGKVEVTVFGPDSL----DPDRCESCYGAEAEDIKCCNTCEDVREAYR-RRGAFKNPDTI 178
Query: 186 VQCKNEYSTEKLKNTFTEGCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTSAA 245
QC+ E ++K++ EGCQ+YG+LEVN+V+G+FH APG S+ +HVHVHD+Q +
Sbjct: 179 EQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDN 238
Query: 246 FNTTHHIRHLSFGIKLQDDDERRKPLDGTVAKAEEGASMFNYYIKIIPTIYERLDGSKLG 305
N TH+I+HLSFG +D PLD T A + + MF Y++K++PT+Y ++DG L
Sbjct: 239 INMTHYIQHLSFG---EDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLR 295
Query: 306 G----------------GDGGMPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNISGTY 349
GD G+PG+F YELSP+MVK+TEK +S H T + I G +
Sbjct: 296 TNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMF 355
Query: 350 ITFMLVDALLHSCVKKISKVEIGGKT 375
L+D+L++ + I K GKT
Sbjct: 356 TVAGLIDSLIYHSARAIQKKIDLGKT 381
>sp|Q54DW2|ERGI3_DICDI Probable endoplasmic reticulum-Golgi intermediate compartment
protein 3 OS=Dictyostelium discoideum GN=ergic3 PE=3
SV=1
Length = 383
Score = 284 bits (726), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 153/389 (39%), Positives = 215/389 (55%), Gaps = 30/389 (7%)
Query: 6 RLKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDSSRG 65
+LK DA+ K +DF KT G V+I+ +FI +L V YF ELFVD++RG
Sbjct: 5 QLKKFDAYPKTVDDFRVKTYTGAIVSIIGGVFILWLFFSQVTLYFSTDIHHELFVDTTRG 64
Query: 66 SKLPIHLDIVVPTISCDYLALDAVDSSGEQHLHVEHNIYKRRLDLDGKPIQEPQKEVVNA 125
KL I++DI + C YL+LDA+D SGE V HNI+K+RL G+PI E
Sbjct: 65 EKLKINMDITFHHLPCAYLSLDAMDVSGEHQFDVAHNIFKKRLSPTGQPIIEAPPIREEE 124
Query: 126 VKKKKVTTENGTTTTELEDPNKCGSCYGAETETR--KCCNTCNEVKEAYRYKKWALPELD 183
+ KK+ +N D CGSCYGAE ++ CCNTC EV+ AY K W L +
Sbjct: 125 INKKESVKDN-------NDVVGCGSCYGAEDPSKGIGCCNTCEEVRVAYSKKGWGL-DPS 176
Query: 184 TIVQCKNEYSTEKLKNTFTEGCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTS 243
I QC E T+ L EGCQ+YG++ VN+V+G+FH APG S+ +H+HVHD+QP+
Sbjct: 177 GIPQCIREGFTKNLVEQNGEGCQVYGFILVNKVAGNFHFAPGKSFQQHHMHVHDLQPFKD 236
Query: 244 AAFNTTHHIRHLSFGIKLQDDDERRKPLDGTVAKAEEGASMFNYYIKIIPTIYERLDGSK 303
+FN +H I LSFG D + PLD G MF Y++K++PTIYE L+G++
Sbjct: 237 GSFNVSHTINRLSFG---NDFPGIKNPLDDVTKTEMVGVGMFQYFVKVVPTIYEGLNGNR 293
Query: 304 L-----------------GGGDGGMPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNIS 346
+ G G+PG+FF Y+LSP+M+K++E+ KS T + I
Sbjct: 294 IATNQYSVTEHYRLLAKKGEEPSGLPGLFFMYDLSPIMMKVSERGKSFASFLTNVCAIIG 353
Query: 347 GTYITFMLVDALLHSCVKKISKVEIGGKT 375
G + F + D+ ++ K + K GKT
Sbjct: 354 GVFTVFGIFDSFIYYSTKNLQKKIDLGKT 382
>sp|Q09895|YAI8_SCHPO Uncharacterized protein C24B11.08c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC24B11.08c PE=3 SV=1
Length = 390
Score = 197 bits (500), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 196/411 (47%), Gaps = 58/411 (14%)
Query: 1 MVFSERLKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFV 60
M F L+ DAF K ED KT GG +T+V L + +++ ++ +Y +V E+ V
Sbjct: 1 MQFRSPLRRFDAFQKTVEDARIKTASGGLITLVSGLIVIFIVLMEWINYRRVIAVHEIIV 60
Query: 61 DSSRGSKLPIHLDIVVPTISCDYLALDAVDSSGEQHLHVEHNIYKRRLDLDGKPIQEPQK 120
+ S G ++ I+ +I P I C L +D +D SGE + H + K RL G+ I
Sbjct: 61 NPSHGDRMEINFNITFPRIPCQILTVDVLDVSGEFQRDIHHTVSKTRLSPSGEIISVDDL 120
Query: 121 EVVNAVKKKKVTTENGTTTTELEDPNKCGSCYGAET----ETRKCCNTCNEVKEAYRYKK 176
++ N ++ +++G +CG CYGA +T CCNTC+ V++AY
Sbjct: 121 DIGN----QQSISDDGAA--------ECGDCYGAADFAPEDTPGCCNTCDAVRDAYGKAH 168
Query: 177 WALPELDTIVQCKNEYSTEKLKNTFTEGCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVH 236
W + ++D QCK+E E + EGC + G L VNR++G+FHIAPG S + HVH
Sbjct: 169 WRIGDVDAFKQCKDENFKELYEAQKVEGCNLAGQLSVNRMAGNFHIAPGRSTQNGNQHVH 228
Query: 237 DIQPYTSA--AFNTTHHIRHLSFGIKLQDDDERRKPLDGTVAKAEEGASMFNYYIKIIPT 294
D + Y + + +H I HLSFG L PLDGTV K + Y+IK +
Sbjct: 229 DTRDYINELDLHDMSHSIHHLSFGPPLDASVHYSNPLDGTVKKVSTADYRYEYFIKCVSY 288
Query: 295 IYERLDGSKL-----------------GGGD----------GGMPGIFFSYELSPLMVKI 327
+ L S L GG + GG+PG++F +++SP+ V
Sbjct: 289 QFMPLSKSTLPIDTNKYAVTQHERSIRGGREEKVPTHVNFHGGIPGVWFQFDISPMRV-- 346
Query: 328 TEKSKSLGHLWTKIMCNISGTYITFMLVDALLHSCVKKISKVEIGGKTVTK 378
+ ++ N G +++ +L ALL CV S V+ G V K
Sbjct: 347 ---------IERQVRGNTFGGFLSNVL--ALLGGCVTLASFVDRGYYEVQK 386
>sp|P39727|ERV46_YEAST ER-derived vesicles protein ERV46 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV46 PE=1 SV=2
Length = 415
Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 189/416 (45%), Gaps = 68/416 (16%)
Query: 7 LKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDSSRGS 66
L LDAF K ED +T GG +T+ C L +L+ + + V T +L VD R +
Sbjct: 6 LLSLDAFAKTEEDVRVRTRAGGLITLSCILTTLFLLVNEWGQFNSVVTRPQLVVDRDRHA 65
Query: 67 KLPIHLDIVVPTISCDYLALDAVDSSGEQHLHV-EHNIYKRRLDLDGKPIQEPQKEVVNA 125
KL +++D+ P++ CD + LD +D SGE L + + RL+ +G+P+ + + V
Sbjct: 66 KLELNMDVTFPSMPCDLVNLDIMDDSGEMQLDILDAGFTMSRLNSEGRPVGDATELHVGG 125
Query: 126 VKKKKVTTENGTTTTELE-DPNKCGSCYGAETETRK---------CCNTCNEVKEAYRYK 175
NG T + DPN CG CYGA+ +++ CC C+ V+ AY
Sbjct: 126 ---------NGDGTAPVNNDPNYCGPCYGAKDQSQNENLAQEEKVCCQDCDAVRSAYLEA 176
Query: 176 KWALPELDTIVQCKNEYSTEKLKNTFTEGCQIYGYLEVNRVSGSFHIAPGLSYSINHVHV 235
WA + I QC+ E K+ EGC+I G ++NR+ G+ H APG Y + H
Sbjct: 177 GWAFFDGKNIEQCEREGYVSKINEHLNEGCRIKGSAQINRIQGNLHFAPGKPYQNAYGHF 236
Query: 236 HDIQPY-TSAAFNTTHHIRHLSFGIKLQD------DDERR-------KPLDGTVAKAEEG 281
HD Y ++ N H I HLSFG +Q +D+R PLDG +
Sbjct: 237 HDTSLYDKTSNLNFNHIINHLSFGKPIQSHSKLLGNDKRHGGAVVATSPLDGRQVFPDRN 296
Query: 282 ASM--FNYYIKIIPTIYERLDG--------------SKLGGG-----------DGGMPGI 314
F+Y+ KI+PT YE LD L GG GG+PG+
Sbjct: 297 THFHQFSYFAKIVPTRYEYLDNVVIETAQFSATFHSRPLAGGRDKDHPNTLHVRGGIPGM 356
Query: 315 FFSYELSPLMVKITEKSKSLGHLWTKIMCN----ISGTYITFMLVDALLHSCVKKI 366
F +E+SPL V E+ G W+ + N I G ++D L + + I
Sbjct: 357 FVFFEMSPLKVINKEQH---GQTWSGFILNCITSIGGVLAVGTVMDKLFYKAQRSI 409
>sp|Q96RQ1|ERGI2_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Homo sapiens GN=ERGIC2 PE=1 SV=2
Length = 377
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 156/379 (41%), Gaps = 65/379 (17%)
Query: 7 LKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDSSRGS 66
+K LDAF K E + E + GG V+++ + ++ L ++ Y E VD S
Sbjct: 13 VKELDAFPKVPESYVETSASGGTVSLIAFTTMALLTIMEFSVYQDTWMKYEYEVDKDFSS 72
Query: 67 KLPIHLDIVVPTISCDYLALDAVDSSGEQHLHVEHNIYKRRLDLDGKPIQEPQKEVVNAV 126
KL I++DI V + C Y+ D +D + + +Y+ + D P Q+ + ++ +
Sbjct: 73 KLRINIDITV-AMKCQYVGADVLDLAETMVASADGLVYEPTV-FDLSPQQKEWQRMLQLI 130
Query: 127 KKKKVTTENGTTTTELEDPNKCGSCYGAETETRKCCNTCNEVKEAYRYKKWALPEL-DTI 185
+ + L++ + K A++ ALP D
Sbjct: 131 QSR------------LQEEHSLQDVI---------------FKSAFKSTSTALPPREDDS 163
Query: 186 VQCKNEYSTEKLKNTFTEGCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTSAA 245
Q N C+I+G+L VN+V+G+FHI G + H H +
Sbjct: 164 SQSPN-------------ACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHES 210
Query: 246 FNTTHHIRHLSFGIKLQDDDERRKPLDGTVAKAEEGASMFNYYIKIIPT----------- 294
+N +H I HLSFG + PLDGT A + MF Y+I ++PT
Sbjct: 211 YNFSHRIDHLSFG---ELVPAIINPLDGTEKIAIDHNQMFQYFITVVPTKLHTYKISADT 267
Query: 295 ----IYERLDGSKLGGGDGGMPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNISGTYI 350
+ ER G G+ GIF Y+LS LMV +TE+ + ++ + G +
Sbjct: 268 HQFSVTERERIINHAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFS 327
Query: 351 TFMLVDALLHSCVKKISKV 369
T +LH K I ++
Sbjct: 328 T----TGMLHGIGKFIVEI 342
>sp|Q4R5C3|ERGI2_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Macaca fascicularis GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 158/378 (41%), Gaps = 63/378 (16%)
Query: 7 LKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDSSRGS 66
+K LDAF K E + E + GG V+++ + ++ L ++ Y E VD S
Sbjct: 13 VKELDAFPKVPESYVETSASGGTVSLIAFTTMALLTIMEFSVYQDTWMKYEYEVDKDFSS 72
Query: 67 KLPIHLDIVVPTISCDYLALDAVDSSGEQHLHVEHNIYKRRLDLDGKPIQEPQKEVVNAV 126
KL I++DI V + C Y+ D +D + + +Y+ + D P Q+ + ++
Sbjct: 73 KLRINIDITV-AMKCQYVGADVLDLAETMVASADGLVYEPAV-FDLSPQQKEWQRMLQ-- 128
Query: 127 KKKKVTTENGTTTTELEDPNKCGSCYGAETETRKCCNTCNEVKEAYRYKKWALPELDTIV 186
T + L++ + K A++ ALP
Sbjct: 129 ----------LTQSRLQEEHSLQDVI---------------FKSAFKSASTALPP----- 158
Query: 187 QCKNEYSTEKLKNTFTEGCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTSAAF 246
+ + S++ + C+I+G+L VN+V+G+FHI G + H H ++
Sbjct: 159 --REDDSSQS-----PDACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHESY 211
Query: 247 NTTHHIRHLSFGIKLQDDDERRKPLDGTVAKAEEGASMFNYYIKIIPT------------ 294
N +H I HLSFG + PLDGT A + MF Y+I ++PT
Sbjct: 212 NFSHRIDHLSFGELVP---AIINPLDGTEKIAIDHNQMFQYFITVVPTKLHTYKISADTH 268
Query: 295 ---IYERLDGSKLGGGDGGMPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNISGTYIT 351
+ ER G G+ GIF Y+LS LMV +TE+ + ++ + G + T
Sbjct: 269 QFSVTERERIINHAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFST 328
Query: 352 FMLVDALLHSCVKKISKV 369
+LH K I ++
Sbjct: 329 ----TGMLHGIGKFIVEI 342
>sp|Q9CR89|ERGI2_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Mus musculus GN=Ergic2 PE=2 SV=1
Length = 377
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 154/378 (40%), Gaps = 63/378 (16%)
Query: 7 LKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDSSRGS 66
+K LDAF K + + E + GG V+++ + ++ L ++ Y E VD S
Sbjct: 13 VKELDAFPKVPDSYVETSASGGTVSLIAFTTMALLTIMEFSVYQDTWMKYEYEVDKDFSS 72
Query: 67 KLPIHLDIVVPTISCDYLALDAVDSSGEQHLHVEHNIYKRRLDLDGKPIQEPQKEVVNAV 126
KL I++DI V + C Y+ D +D + + Y+ L D P Q + ++ +
Sbjct: 73 KLRINIDITV-AMKCHYVGADVLDLAETMVASADGLAYEPAL-FDLSPQQREWQRMLQLI 130
Query: 127 KKKKVTTENGTTTTELEDPNKCGSCYGAETETRKCCNTCNEVKEAYRYKKWALPELDTIV 186
+ + L++ + K A++ ALP
Sbjct: 131 QSR------------LQEEHSLQDVI---------------FKSAFKSASTALP------ 157
Query: 187 QCKNEYSTEKLKNTFTEGCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTSAAF 246
E + + C+I+G+L VN+V+G+FHI G + H H ++
Sbjct: 158 ------PREDDSSLTPDACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHDSY 211
Query: 247 NTTHHIRHLSFGIKLQDDDERRKPLDGTVAKAEEGASMFNYYIKIIPT------------ 294
N +H I HLSFG + PLDGT A + MF Y+I ++PT
Sbjct: 212 NFSHRIDHLSFGELVPG---IINPLDGTEKIAVDHNQMFQYFITVVPTKLHTYKISADTH 268
Query: 295 ---IYERLDGSKLGGGDGGMPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNISGTYIT 351
+ ER G G+ GIF Y+LS LMV +TE+ + ++ I G + T
Sbjct: 269 QFSVTERERIINHAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIIGGIFST 328
Query: 352 FMLVDALLHSCVKKISKV 369
+LH K I ++
Sbjct: 329 ----TGMLHGIGKFIVEI 342
>sp|Q5EHU7|ERGI2_GECJA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Gecko japonicus GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 158/378 (41%), Gaps = 63/378 (16%)
Query: 7 LKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDSSRGS 66
+K LDAF K + + E + GG V+++ + ++ L ++ Y E VD S
Sbjct: 13 VKELDAFPKVPDSYVETSASGGTVSLIAFTTMALLTIMEFSVYQDTWMKYEYEVDKDFSS 72
Query: 67 KLPIHLDIVVPTISCDYLALDAVDSSGEQHLHVEHNIYKRRLDLDGKPIQEPQKEVVNAV 126
KL I++DI V + C Y+ D +D + + +Y+ + D P Q+ + ++ +
Sbjct: 73 KLRINIDITV-AMKCQYVGADVLDLAETMVASTDGLVYEPAI-FDLSPQQKEWQRMLQRI 130
Query: 127 KKKKVTTENGTTTTELEDPNKCGSCYGAETETRKCCNTCNEVKEAYRYKKWALPELDTIV 186
+ + L++ + K ++ ALP
Sbjct: 131 QSR------------LQEEHSLQDVI---------------FKSTFKSASTALPP----- 158
Query: 187 QCKNEYSTEKLKNTFTEGCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTSAAF 246
+ + S++ + C+I+G+L VN+V+G+FHI G + H H ++
Sbjct: 159 --REDDSSQP-----PDACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHDSY 211
Query: 247 NTTHHIRHLSFGIKLQDDDERRKPLDGTVAKAEEGASMFNYYIKIIPT------------ 294
N +H I HLSFG + PLDGT A + MF Y+I ++PT
Sbjct: 212 NFSHRIDHLSFGELVPG---IINPLDGTEKIALDHNQMFQYFITVVPTKLHTYKISADTH 268
Query: 295 ---IYERLDGSKLGGGDGGMPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNISGTYIT 351
+ ER G G+ GIF Y+LS LMV +TE+ + ++ + G + T
Sbjct: 269 QFSVTERERVINHAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFST 328
Query: 352 FMLVDALLHSCVKKISKV 369
+LH K I ++
Sbjct: 329 ----TGMLHGIGKFIVEI 342
>sp|Q7T2D4|ERGI2_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Danio rerio GN=ergic2 PE=2 SV=1
Length = 376
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 18/180 (10%)
Query: 199 NTFTEGCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTSAAFNTTHHIRHLSFG 258
N C+I+G+L VN+V+G+FHI G + H H + +N +H I HLSFG
Sbjct: 163 NQPLNACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVSHETYNFSHRIDHLSFG 222
Query: 259 IKLQDDDERRKPLDGTVAKAEEGASMFNYYIKIIPT---------------IYERLDGSK 303
++ PLDGT + + MF Y+I I+PT + ER
Sbjct: 223 ---EEIPGILNPLDGTEKVSADHNQMFQYFITIVPTKLQTYKVYADTHQYSVTERERVIN 279
Query: 304 LGGGDGGMPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNISGTYITFMLVDALLHSCV 363
G G+ GIF Y++S LMVK+TE+ ++ I G + T ++ L+ CV
Sbjct: 280 HAAGSHGVSGIFMKYDISSLMVKVTEQHMPFWQFLVRLCGIIGGIFSTTGMLHNLVGFCV 339
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 7 LKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDSSRGS 66
++ LDAF K E + E T GG V+++ + ++ L + Y E VD S
Sbjct: 13 VRELDAFPKVPESYVETTASGGTVSLLAFTAMALLAFFEFFVYRDTWMKYEYEVDKDFTS 72
Query: 67 KLPIHLDIVVPTISCDYLALDAVD 90
KL I++DI V + C ++ D +D
Sbjct: 73 KLRINIDITV-AMRCQFVGADVLD 95
>sp|Q04651|ERV41_YEAST ER-derived vesicles protein ERV41 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV41 PE=1 SV=1
Length = 352
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 145/355 (40%), Gaps = 68/355 (19%)
Query: 7 LKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDSSRGS 66
LK DAF K E + +K+ GG +++ +LF+ ++ + +YF ++ VDS
Sbjct: 4 LKTFDAFPKTEEQYKKKSTKGGLTSLLTYLFLLFIAWTEFGEYFGGYIDQQYVVDSQVRD 63
Query: 67 KLPIHLDIVVPTISCDYLALDAVDSSGEQHLHVEHNIYKRRLDLDGKPIQEPQKEVVNAV 126
+ I++DI V T CD+L ++ D + ++ L +E + P P VN +
Sbjct: 64 TVQINMDIYVNT-KCDWLQINVRDQTMDRKLVLEELQLEEM------PFFIPYDTKVNDI 116
Query: 127 KKKKVTTENGTTTTELEDPNKCGSCYGAETETRKCCNTCNEVKEAYRYKKWALPELDTIV 186
N T EL++ G A E R+ +T + E+ K LPE +
Sbjct: 117 --------NEIITPELDE--ILGEAIPA--EFREKLDTRSFFDES-DPNKAHLPEFN--- 160
Query: 187 QCKNEYSTEKLKNTFTEGCQIYGYLEVNRVSGSFHI-APGLSYSINHVHVHDIQPYTSAA 245
GC ++G + VNRVSG I A L Y + P
Sbjct: 161 -----------------GCHVFGSIPVNRVSGELQITAKSLGYVASRK-----APLEELK 198
Query: 246 FNTTHHIRHLSFGIKLQDDDERRKPLDGTVA-KAEEGASMFNYYIKIIPTIYERL----D 300
FN H I SFG D PLD T +E + + YY ++PT++++L D
Sbjct: 199 FN--HVINEFSFGDFYPYID---NPLDNTAQFNQDEPLTTYVYYTSVVPTLFKKLGAEVD 253
Query: 301 GSKLGGGD------------GGMPGIFFSYELSPLMVKITEKSKSLGHLWTKIMC 343
++ D MPGIFF Y PL + +++ S +++
Sbjct: 254 TNQYSVNDYRYLYKDVAAKGDKMPGIFFKYNFEPLSIVVSDVRLSFIQFLVRLVA 308
>sp|O94283|ERV41_SCHPO ER-derived vesicles protein 41 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=erv41 PE=1 SV=1
Length = 333
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 77/164 (46%), Gaps = 29/164 (17%)
Query: 204 GCQIYGYLEVNRVSGSFHI-APGLSYSINHVHVHDIQPYTSAAFNTTHHIRHLSFGIKLQ 262
C+IYG L VNRV+G HI APG Y +++ H + N TH+I LSFG +
Sbjct: 151 ACRIYGQLVVNRVNGQLHITAPGWGYGRSNIPFHSL--------NFTHYIEELSFG---E 199
Query: 263 DDDERRKPLDGTVAKAEEGASMFNYYIKIIPTIYERLDGS---------------KLGGG 307
LDG A + F YY+ ++PT Y+ S +LG G
Sbjct: 200 YYPALVNALDGHYGHANDHPFAFQYYLSVLPTSYKSSFRSFETNQYSLTENSVVRQLGFG 259
Query: 308 DGGMPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNISGTYIT 351
PGIF Y+L PL V++ +K ++ +I+ ISG IT
Sbjct: 260 SLP-PGIFIDYDLEPLAVRVVDKHPNVASTLLRILA-ISGGLIT 301
>sp|Q4V8Y6|ERGI1_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Danio rerio GN=ergic1 PE=2 SV=1
Length = 290
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 29/186 (15%)
Query: 204 GCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTSAAFNTTHHIRHLSFGIKLQD 263
GC+ G +N+V G+FH++ H QP + + TH I L+FG KLQ
Sbjct: 114 GCRFEGEFSINKVPGNFHVS---------THSATAQPQSP---DMTHIIHKLAFGAKLQV 161
Query: 264 DDERR--KPLDGTVAKAEEGASMFNYYIKIIPTIYERLDGSK-------------LGGGD 308
+ L G + +Y +KI+PT+YE L G + +
Sbjct: 162 QHVQGAFNALGGADRLQSNALASHDYILKIVPTVYEELGGKQRFSYQYTVANKEYVAYSH 221
Query: 309 GG--MPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNISGTYITFMLVDALLHSCVKKI 366
G +P I+F Y+LSP+ VK TE+ + T I I GT+ ++D+ + + +
Sbjct: 222 TGRIIPAIWFRYDLSPITVKYTERRRPFYRFITTICAIIGGTFTVAGIIDSCIFTASEAW 281
Query: 367 SKVEIG 372
K++IG
Sbjct: 282 KKIQIG 287
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 9/188 (4%)
Query: 7 LKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDS---S 63
++ D + K +D + T G ++I C +F+ +L ++ + EL+VD
Sbjct: 5 VRRFDIYRKVPKDLTQPTYTGAFISICCCVFMLFLFLSELTGFIATEIVNELYVDDPDKD 64
Query: 64 RGSKLPIHLDIVVPTISCDYLALDAVDSSGEQHL-HVEHNIYKRRLDLDGKPIQEPQKEV 122
G K+ + L+I +P + CD + LD D G + H+E+++ K L+ +G + +
Sbjct: 65 SGGKIDVSLNISLPNLHCDLVGLDIQDEMGRHEVGHIENSM-KVPLN-NGHGCRFEGEFS 122
Query: 123 VNAVKKK-KVTTENGTTTTELEDPNKC--GSCYGAETETRKCCNTCNEVKEAYRYKKWAL 179
+N V V+T + T + D +GA+ + + N + A R + AL
Sbjct: 123 INKVPGNFHVSTHSATAQPQSPDMTHIIHKLAFGAKLQVQHVQGAFNALGGADRLQSNAL 182
Query: 180 PELDTIVQ 187
D I++
Sbjct: 183 ASHDYILK 190
>sp|Q6NS19|ERGI1_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Xenopus laevis GN=ergic1 PE=2 SV=1
Length = 290
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 29/186 (15%)
Query: 204 GCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTSAAFNTTHHIRHLSFGIKLQD 263
GC+ G +N+V G+FH++ H QP A + H I LSFG LQ
Sbjct: 114 GCRFEGLFSINKVPGNFHVS---------THSAIAQP---ANPDMRHIIHKLSFGNTLQV 161
Query: 264 DD--ERRKPLDGTVAKAEEGASMFNYYIKIIPTIYERLDGSK-------------LGGGD 308
D+ L G A + +Y +KI+PT+YE L+G + +
Sbjct: 162 DNIHGAFNALGGADKLASKALESHDYVLKIVPTVYEDLNGKQQFSYQYTVANKAYVAYSH 221
Query: 309 GG--MPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNISGTYITFMLVDALLHSCVKKI 366
G +P I+F Y+LSP+ VK TE+ + + T + I GT+ ++D+ + + +
Sbjct: 222 TGRVVPAIWFRYDLSPITVKYTERRQPMYRFITTVCAIIGGTFTVAGILDSFIFTASEAW 281
Query: 367 SKVEIG 372
K+++G
Sbjct: 282 KKIQLG 287
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 7 LKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDS---S 63
+ D + K +D + T G ++I C LFI++L ++ + EL+VD
Sbjct: 5 FRRFDIYRKVPKDLTQPTYTGAIISICCCLFITFLFLSELTGFIANEIVNELYVDDPDKD 64
Query: 64 RGSKLPIHLDIVVPTISCDYLALDAVDSSGEQHL-HVEHNI 103
G K+ + L++ +P + C+ + LD D G + H+++++
Sbjct: 65 SGGKIDVTLNVTLPNLPCEVVGLDIQDEMGRHEVGHIDNSM 105
>sp|Q9T042|PDI54_ARATH Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana GN=PDIL5-4
PE=2 SV=1
Length = 480
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 37/214 (17%)
Query: 186 VQCKNEYSTEKLKNT-FTEGCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTSA 244
++ K++ S+ LK T GC++ GY+ V +V G+ ++ + S +H + S+
Sbjct: 274 LEDKSDNSSRTLKKAPSTGGCRVEGYMRVKKVPGNLMVS---ARSGSH-------SFDSS 323
Query: 245 AFNTTHHIRHLSFGIKLQ----DDDERRKPLDGTVAKAEEGASMFN-----------YYI 289
N +H + HLSFG ++ + +R P G +G S N +Y+
Sbjct: 324 QMNMSHVVNHLSFGRRIMPQKFSEFKRLSPYLGLSHDRLDGRSFINQRDLGPNVTIEHYL 383
Query: 290 KIIPTIYERLDGSKLG-----------GGDGGMPGIFFSYELSPLMVKITEKSKSLGHLW 338
+I+ T + +G L +P F +ELSP+ V ITE SKS H
Sbjct: 384 QIVKTEVVKSNGQALVEAYEYTAHSSVAHSYYLPVAKFHFELSPMQVLITENSKSFSHFI 443
Query: 339 TKIMCNISGTYITFMLVDALLHSCVKKISKVEIG 372
T + I G + ++D++LH + + K+E+G
Sbjct: 444 TNVCAIIGGVFTVAGILDSILHHSMTLMKKIELG 477
>sp|Q9DC16|ERGI1_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Mus musculus GN=Ergic1 PE=1 SV=1
Length = 290
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 29/186 (15%)
Query: 204 GCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTSAAFNTTHHIRHLSFG--IKL 261
GC+ G +N+V G+FH++ H QP + TH I LSFG +++
Sbjct: 114 GCRFEGQFSINKVPGNFHVS---------THSATAQPQNP---DMTHTIHKLSFGDTLQV 161
Query: 262 QDDDERRKPLDGTVAKAEEGASMFNYYIKIIPTIYERLDGSK-------------LGGGD 308
Q+ L G + +Y +KI+PT+YE G + +
Sbjct: 162 QNVHGAFNALGGADRLTSNPLASHDYILKIVPTVYEDKSGKQRYSYQYTVANKEYVAYSH 221
Query: 309 GG--MPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNISGTYITFMLVDALLHSCVKKI 366
G +P I+F Y+LSP+ VK TE+ + L T I I GT+ ++D+ + + +
Sbjct: 222 TGRIIPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGILDSCIFTASEAW 281
Query: 367 SKVEIG 372
K+++G
Sbjct: 282 KKIQLG 287
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 7 LKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDS---S 63
+ D + K +D + T G ++I C LFI +L ++ + EL+VD
Sbjct: 5 FRRFDIYRKVPKDLTQPTYTGAIISICCCLFILFLFLSELTGFITTEVVNELYVDDPDKD 64
Query: 64 RGSKLPIHLDIVVPTISCDYLALDAVDSSGEQHL-HVEHNI 103
G K+ + L+I +P + C+ + LD D G + H+++++
Sbjct: 65 SGGKIDVSLNISLPNLHCELVGLDIQDEMGRHEVGHIDNSM 105
>sp|Q969X5|ERGI1_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Homo sapiens GN=ERGIC1 PE=1 SV=1
Length = 290
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 29/186 (15%)
Query: 204 GCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTSAAFNTTHHIRHLSFG--IKL 261
GC+ G +N+V G+FH++ H QP + TH I LSFG +++
Sbjct: 114 GCRFEGQFSINKVPGNFHVS---------THSATAQPQNP---DMTHVIHKLSFGDTLQV 161
Query: 262 QDDDERRKPLDGTVAKAEEGASMFNYYIKIIPTIYERLDGSK-------------LGGGD 308
Q+ L G + +Y +KI+PT+YE G + +
Sbjct: 162 QNIHGAFNALGGADRLTSNPLASHDYILKIVPTVYEDKSGKQRYSYQYTVANKEYVAYSH 221
Query: 309 GG--MPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNISGTYITFMLVDALLHSCVKKI 366
G +P I+F Y+LSP+ VK TE+ + L T I I GT+ ++D+ + + +
Sbjct: 222 TGRIIPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGILDSCIFTASEAW 281
Query: 367 SKVEIG 372
K+++G
Sbjct: 282 KKIQLG 287
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 7 LKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFVDS---S 63
+ D + K +D + T G ++I C LFI +L ++ + EL+VD
Sbjct: 5 FRRFDIYRKVPKDLTQPTYTGAIISICCCLFILFLFLSELTGFITTEVVNELYVDDPDKD 64
Query: 64 RGSKLPIHLDIVVPTISCDYLALDAVDSSGEQHL-HVEHNI 103
G K+ + L+I +P + C+ + LD D G + H+++++
Sbjct: 65 SGGKIDVSLNISLPNLHCELVGLDIQDEMGRHEVGHIDNSM 105
>sp|Q9LJU2|PDI53_ARATH Protein disulfide-isomerase 5-3 OS=Arabidopsis thaliana GN=PDIL5-3
PE=2 SV=1
Length = 483
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 1 MVFSERLKGLDAFTKPYEDFHEKTVYGGAVTIVCWLFISYLICVDVCDYFQVSTTEELFV 60
MV S +LK +D + K D E ++ G ++IV LF+ +L +++ Y +V+TT + V
Sbjct: 1 MVSSTKLKSVDFYRKIPRDLTEASLSGAGLSIVAALFMMFLFGMELSSYLEVNTTTAVIV 60
Query: 61 D-SSRGSKLPIHLDIVVPTISCDYLALDAVDSSGEQHLHVEHNIYKRRLD 109
D SS G L I +I P +SC++ ++D D G L++ + K +D
Sbjct: 61 DKSSDGDFLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTVRKFPID 110
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 39/204 (19%)
Query: 198 KNTFTEGCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTSAAFNTTHHIRHLSF 257
K T GC++ GY+ V +V G+ I+ H H + S+ N +H + H SF
Sbjct: 287 KGPVTGGCRVEGYVRVKKVPGNLVISA-------HSGAHS---FDSSQMNMSHVVSHFSF 336
Query: 258 G----IKLQDDDERRKP--------LDGT--VAKAEEGASM-FNYYIKIIPT-IYERLDG 301
G +L D +R P LDG + + E GA++ +Y++ + T + R G
Sbjct: 337 GRMISPRLLTDMKRLLPYLGLSHDRLDGKAFINQHEFGANVTIEHYLQTVKTEVITRRSG 396
Query: 302 SKLG-------------GGDGGMPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNISGT 348
+ +P F +ELSP+ + ITE KS H T + I G
Sbjct: 397 QEHSLIEEYEYTAHSSVAQTYYLPVAKFHFELSPMQILITENPKSFSHFITNLCAIIGGV 456
Query: 349 YITFMLVDALLHSCVKKISKVEIG 372
+ ++D++ H+ V+ + KVE+G
Sbjct: 457 FTVAGILDSIFHNTVRLVKKVELG 480
>sp|Q69SA9|PDI54_ORYSJ Protein disulfide isomerase-like 5-4 OS=Oryza sativa subsp.
japonica GN=PDIL5-4 PE=2 SV=1
Length = 485
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 40/202 (19%)
Query: 201 FTEGCQIYGYLEVNRVSGSFHIAPGLSYSINHVHVHDIQPYTSAAFNTTHHIRHLSFGIK 260
T GC+I G++ V +V GS I+ + S +H + + N +H++ SFG +
Sbjct: 291 LTSGCRIEGFVRVKKVPGSVVIS---ARSGSH-------SFDPSQINVSHYVTQFSFGKR 340
Query: 261 LQ----DDDERRKPLDGTVAKAEEGAS------------MFNYYIKIIPTIYERLDGSKL 304
L ++ +R P G G S +Y++I+ T L SK
Sbjct: 341 LSAKMFNELKRLTPYVGGHHDRLAGQSYIVKHGDVNANVTIEHYLQIVKTELVTLRSSKE 400
Query: 305 GG--------------GDGGMPGIFFSYELSPLMVKITEKSKSLGHLWTKIMCNISGTYI 350
+P + F +E SP+ V +TE KS H T + I G +
Sbjct: 401 LKLVEEYEYTAHSSLVHSFYVPVVKFHFEPSPMQVLVTELPKSFSHFITNVCAIIGGVFT 460
Query: 351 TFMLVDALLHSCVKKISKVEIG 372
++D++ H+ ++ + KVE+G
Sbjct: 461 VAGILDSIFHNTLRLVKKVELG 482
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,372,552
Number of Sequences: 539616
Number of extensions: 6510703
Number of successful extensions: 15014
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 14907
Number of HSP's gapped (non-prelim): 42
length of query: 379
length of database: 191,569,459
effective HSP length: 119
effective length of query: 260
effective length of database: 127,355,155
effective search space: 33112340300
effective search space used: 33112340300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)