Query psy13967
Match_columns 379
No_of_seqs 111 out of 544
Neff 7.0
Searched_HMMs 13730
Date Fri Aug 16 16:10:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13967.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/13967hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1y29a_ g.3.6.2 (A:) Huwentoxi 25.4 15 0.0011 20.0 1.4 16 150-166 8-23 (28)
2 d1i26a_ g.3.6.3 (A:) PTU-1 {As 14.0 33 0.0024 19.3 1.2 13 149-164 10-22 (34)
3 d1hyka_ g.3.5.1 (A:) Agouti-re 12.5 34 0.0025 20.9 1.0 15 149-166 6-20 (46)
4 d2pg3a1 c.26.2.1 (A:1-230) Que 10.9 37 0.0027 27.3 1.1 28 148-176 185-214 (230)
5 d1a7ia2 g.39.1.3 (A:36-67) Cys 8.6 16 0.0011 21.0 -1.6 11 144-154 19-29 (32)
6 d2bcgg2 c.3.1.3 (G:400-446) Gu 8.0 74 0.0054 19.8 1.4 15 161-175 22-36 (47)
7 d1f3ka_ g.3.6.1 (A:) Conotoxin 7.5 51 0.0037 17.4 0.4 11 78-88 5-15 (26)
8 d1m1la_ d.260.1.1 (A:) Suppres 7.2 1.3E+02 0.0093 25.0 3.1 22 256-277 27-48 (236)
9 d1qwta_ b.26.1.3 (A:) Interfer 6.8 1.5E+02 0.011 24.6 3.3 29 253-296 156-184 (239)
10 d1x6aa2 g.39.1.3 (A:42-75) Lim 6.6 16 0.0012 21.3 -2.2 7 146-152 24-30 (34)
No 1
>d1y29a_ g.3.6.2 (A:) Huwentoxin-X {Spider (Selenocosmia hainana) [TaxId: 209901]}
Probab=25.43 E-value=15 Score=19.99 Aligned_cols=16 Identities=44% Similarity=1.315 Sum_probs=9.8
Q ss_pred CCcCCcCCCccccCchH
Q psy13967 150 SCYGAETETRKCCNTCN 166 (379)
Q Consensus 150 ~Cyga~~~~~~cCntce 166 (379)
+||||. ....||-.|.
T Consensus 8 pcygat-qkipccgvcs 23 (28)
T d1y29a_ 8 PCYGAT-QKIPCCGVCS 23 (28)
T ss_dssp CCCTTC-CSCCBSSCBS
T ss_pred cccccc-ccccceeeec
Confidence 688874 2334886663
No 2
>d1i26a_ g.3.6.3 (A:) PTU-1 {Assassin bug (Peirates turpis) [TaxId: 181095]}
Probab=14.01 E-value=33 Score=19.30 Aligned_cols=13 Identities=38% Similarity=1.380 Sum_probs=8.3
Q ss_pred CCCcCCcCCCccccCc
Q psy13967 149 GSCYGAETETRKCCNT 164 (379)
Q Consensus 149 ~~Cyga~~~~~~cCnt 164 (379)
.+|+|...+ |||-
T Consensus 10 apcfgtdkp---ccnp 22 (34)
T d1i26a_ 10 APCFGTDKP---CCNP 22 (34)
T ss_dssp SCCTTTTCC---BSST
T ss_pred CCccCCCCC---CcCh
Confidence 368876554 8773
No 3
>d1hyka_ g.3.5.1 (A:) Agouti-related protein {Synthetic, based on Homo sapiens sequence}
Probab=12.53 E-value=34 Score=20.88 Aligned_cols=15 Identities=40% Similarity=1.265 Sum_probs=9.5
Q ss_pred CCCcCCcCCCccccCchH
Q psy13967 149 GSCYGAETETRKCCNTCN 166 (379)
Q Consensus 149 ~~Cyga~~~~~~cCntce 166 (379)
.||.|...+ ||+-|.
T Consensus 6 eSCLG~~~P---CCdpC~ 20 (46)
T d1hyka_ 6 ESCLGQQVP---CCDPCA 20 (46)
T ss_dssp CBCSSSCSC---BSSTTC
T ss_pred hHhhCCCCC---CcCchh
Confidence 467776655 776554
No 4
>d2pg3a1 c.26.2.1 (A:1-230) Queuosine biosynthesis protein QueC {Erwinia carotovora [TaxId: 554]}
Probab=10.93 E-value=37 Score=27.33 Aligned_cols=28 Identities=18% Similarity=0.489 Sum_probs=19.1
Q ss_pred CCCCcCCcCCCccc--cCchHHHHHHHHhcC
Q psy13967 148 CGSCYGAETETRKC--CNTCNEVKEAYRYKK 176 (379)
Q Consensus 148 c~~Cyga~~~~~~c--Cntce~v~~ay~~~~ 176 (379)
.-|||.... ...| |.+|.+-+.||++.+
T Consensus 185 T~SCy~~~~-~~~CG~C~~C~~R~~af~~~~ 214 (230)
T d2pg3a1 185 TLTCYNGIK-GDGCGQCAACHLRANGLAQYQ 214 (230)
T ss_dssp CCCCTTSCC-TTTTSCSHHHHHHHHHHHHHH
T ss_pred cCCCCCCCC-CCCCCCCHhHHHHHHHHHHhC
Confidence 457885432 1235 899999999998754
No 5
>d1a7ia2 g.39.1.3 (A:36-67) Cysteine-rich (intestinal) protein, CRP, CRIP {Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934]}
Probab=8.60 E-value=16 Score=20.95 Aligned_cols=11 Identities=45% Similarity=0.999 Sum_probs=8.2
Q ss_pred CCCCCCCCcCC
Q psy13967 144 DPNKCGSCYGA 154 (379)
Q Consensus 144 ~~~~c~~Cyga 154 (379)
..-||-+|||.
T Consensus 19 ~eiYCKsCygk 29 (32)
T d1a7ia2 19 AEVYCKSCYGK 29 (32)
T ss_dssp TEEECSHHHHH
T ss_pred ceEEehhhccc
Confidence 34589999974
No 6
>d2bcgg2 c.3.1.3 (G:400-446) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=8.00 E-value=74 Score=19.82 Aligned_cols=15 Identities=20% Similarity=0.235 Sum_probs=12.5
Q ss_pred ccCchHHHHHHHHhc
Q psy13967 161 CCNTCNEVKEAYRYK 175 (379)
Q Consensus 161 cCntce~v~~ay~~~ 175 (379)
-.-+|+||++.|++-
T Consensus 22 FEtt~~Dv~diY~ri 36 (47)
T d2bcgg2 22 FESMTDDVKDIYFRV 36 (47)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHh
Confidence 455899999999975
No 7
>d1f3ka_ g.3.6.1 (A:) Conotoxin {Conus textile, Tx VII [TaxId: 6494]}
Probab=7.50 E-value=51 Score=17.39 Aligned_cols=11 Identities=36% Similarity=0.760 Sum_probs=8.2
Q ss_pred CCccceeeeee
Q psy13967 78 TISCDYLALDA 88 (379)
Q Consensus 78 ~~pC~~l~vDv 88 (379)
+-||+..++|-
T Consensus 5 depcdvfsldc 15 (26)
T d1f3ka_ 5 DEPCDVFSLDC 15 (26)
T ss_dssp TCCCCSSSCCS
T ss_pred CCCccEEEEec
Confidence 56888888774
No 8
>d1m1la_ d.260.1.1 (A:) Suppressor of Fused, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.16 E-value=1.3e+02 Score=25.02 Aligned_cols=22 Identities=14% Similarity=-0.089 Sum_probs=12.8
Q ss_pred eeccCCCCCCcCCCCCCCceee
Q psy13967 256 SFGIKLQDDDERRKPLDGTVAK 277 (379)
Q Consensus 256 sFG~~~p~~~~~~~PLdg~~~~ 277 (379)
-||.-.++..|..+||||...-
T Consensus 27 ~~~~~~~~~lGG~dpLDgisiy 48 (236)
T d1m1la_ 27 QVTAIVKYWLGGPDPLDYVSMY 48 (236)
T ss_dssp EEECSSCGGGTCSCSCSEEEEE
T ss_pred eecceeeeccCCCCCCCeEEEe
Confidence 3444444444677788887544
No 9
>d1qwta_ b.26.1.3 (A:) Interferon regulatory factor 3 (IRF3), transactivation domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.81 E-value=1.5e+02 Score=24.63 Aligned_cols=29 Identities=17% Similarity=0.378 Sum_probs=19.4
Q ss_pred eEeeeccCCCCCCcCCCCCCCceeeeccCceeEEEEEEEEEEeE
Q psy13967 253 RHLSFGIKLQDDDERRKPLDGTVAKAEEGASMFNYYIKIIPTIY 296 (379)
Q Consensus 253 ~~lsFG~~~p~~~~~~~PLdg~~~~~~~~~~~~~YflkVVPT~y 296 (379)
=.|.||+..| .. .|++..-.. ++|||+.-
T Consensus 156 i~lcFGeewp---d~-~p~ekkLI~-----------VqV~p~~a 184 (239)
T d1qwta_ 156 LWFCVGESWP---QD-QPWTKRLVM-----------VKVVPTCL 184 (239)
T ss_dssp EEEEECCSCT---TC-CTTTTCCEE-----------EEEEEHHH
T ss_pred EEEEeccccC---CC-CCcccceEE-----------EEEEHHHH
Confidence 3699999988 33 466544322 88999753
No 10
>d1x6aa2 g.39.1.3 (A:42-75) Lim domain kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.61 E-value=16 Score=21.29 Aligned_cols=7 Identities=43% Similarity=1.065 Sum_probs=5.9
Q ss_pred CCCCCCc
Q psy13967 146 NKCGSCY 152 (379)
Q Consensus 146 ~~c~~Cy 152 (379)
-|||.||
T Consensus 24 LYCG~Cy 30 (34)
T d1x6aa2 24 LYCGKCH 30 (34)
T ss_dssp EEEHHHH
T ss_pred eeeecch
Confidence 4899998
Done!