BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13969
(877 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8K4P0|WDR33_MOUSE pre-mRNA 3' end processing protein WDR33 OS=Mus musculus GN=Wdr33
PE=2 SV=1
Length = 1330
Score = 612 bits (1579), Expect = e-174, Method: Compositional matrix adjust.
Identities = 307/574 (53%), Positives = 392/574 (68%), Gaps = 53/574 (9%)
Query: 35 QFHHRPNFNKNFHTPFRPFHKNPN-----QIMDPDFDGKKLRKSSMRKTVDYNAAVINAL 89
+F H P F P + F+K P+ + FDGK++RK+ RKT+DYN +VI L
Sbjct: 10 RFFHMPRFQ--HQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYNPSVIKYL 67
Query: 90 EARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAVTTRFVKAATNKMRCPIFSMTW 149
E R+WQRD RD RA+QPD YY ++PP +N NAVTT+FV+ +TNK++CP+F + W
Sbjct: 68 ENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRW 127
Query: 150 TPEGRRL------------------------AHDCAVRHMVWSHNGLWMVTSDHQGYIKY 185
TPEGRRL AHD VR M WSHN +WM+T+DH GY+KY
Sbjct: 128 TPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKY 187
Query: 186 WQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADV 245
WQSNMNNVK FQ HKE+IR SFSP+D+KFATCSDDGTVR+WDF RC EE++LRGHGADV
Sbjct: 188 WQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADV 247
Query: 246 KCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTAS 305
KCVDWHP K L+VSGSKD+QQP+K WDPK GQ+LATLHAHK+TVM++ N NGNWL+TAS
Sbjct: 248 KCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTAS 307
Query: 306 RDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEV 365
RDHL K+FDIRNL E+Q FRGHKKEA+AVAWHP HEGLF+SGG+DGS++FWHVG +KEV
Sbjct: 308 RDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEV 367
Query: 366 GCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGL-AHCITG 424
G + AH+ +IW++AWHPLGHIL +GSNDH SKFWTRNR GD MRDRYN L G
Sbjct: 368 GGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDG 427
Query: 425 VYNEEMELNDSAVIPGMGLEDEDSVFPSSEPLNEVGKSTSGPNTNDPSNIPGLDIDSTEL 484
V +++E N AVIPGMG+ ++ + E ++GK S + IPGLD E+
Sbjct: 428 VEYDDLEPNSLAVIPGMGIPEQLKLAMEQE---QMGKDES---SEIEMTIPGLDWGMEEV 481
Query: 485 ----QKIIPVKKVPFSKPIPKHFQEAWM-NKI-IVYDTKVLPVAENDMKALNEAAIKVLM 538
QK +P KKVP++KPIP FQ+AWM NK+ I +VL + D+K + + +
Sbjct: 482 MQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAEI 541
Query: 539 EKVPGTKKIADLNPDAIFVHGKVIKVQKGSELAQ 572
E +++A L + + ++++ K LAQ
Sbjct: 542 E-----QEMATLQ----YTNPQLLEQLKIERLAQ 566
>sp|Q9C0J8|WDR33_HUMAN pre-mRNA 3' end processing protein WDR33 OS=Homo sapiens GN=WDR33
PE=1 SV=2
Length = 1336
Score = 611 bits (1576), Expect = e-174, Method: Compositional matrix adjust.
Identities = 307/574 (53%), Positives = 391/574 (68%), Gaps = 53/574 (9%)
Query: 35 QFHHRPNFNKNFHTPFRPFHKNPN-----QIMDPDFDGKKLRKSSMRKTVDYNAAVINAL 89
+F H P F P + F+K P+ + FDGK++RK+ RKT+DYN +VI L
Sbjct: 10 RFFHMPRFQ--HQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYNPSVIKYL 67
Query: 90 EARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAVTTRFVKAATNKMRCPIFSMTW 149
E R+WQRD RD RA+QPD YY ++PP +N NAVTT+FV+ +TNK++CP+F + W
Sbjct: 68 ENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRW 127
Query: 150 TPEGRRL------------------------AHDCAVRHMVWSHNGLWMVTSDHQGYIKY 185
TPEGRRL AHD VR M WSHN +WM+T+DH GY+KY
Sbjct: 128 TPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKY 187
Query: 186 WQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADV 245
WQSNMNNVK FQ HKE+IR SFSP+D+KFATCSDDGTVR+WDF RC EE++LRGHGADV
Sbjct: 188 WQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADV 247
Query: 246 KCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTAS 305
KCVDWHP K L+VSGSKD+QQP+K WDPK GQ+LATLHAHK+TVM++ N NGNWL+TAS
Sbjct: 248 KCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTAS 307
Query: 306 RDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEV 365
RDHL K+FDIRNL E+Q FRGHKKEA+AVAWHP HEGLF+SGG+DGS++FWHVG +KEV
Sbjct: 308 RDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEV 367
Query: 366 GCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGL-AHCITG 424
G + AH+ +IW++AWHPLGHIL +GSNDH SKFWTRNR GD MRDRYN L G
Sbjct: 368 GGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDG 427
Query: 425 VYNEEMELNDSAVIPGMGLEDEDSVFPSSEPLNEVGKSTSGPNTNDPSNIPGLDIDSTEL 484
V +++E N AVIPGMG+ ++ + E ++GK S IPGLD E+
Sbjct: 428 VEYDDLEPNSLAVIPGMGIPEQLKLAMEQE---QMGKDES---NEIEMTIPGLDWGMEEV 481
Query: 485 ----QKIIPVKKVPFSKPIPKHFQEAWM-NKI-IVYDTKVLPVAENDMKALNEAAIKVLM 538
QK +P KKVP++KPIP FQ+AWM NK+ I +VL + D+K + + +
Sbjct: 482 MQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAEI 541
Query: 539 EKVPGTKKIADLNPDAIFVHGKVIKVQKGSELAQ 572
E +++A L + + ++++ K LAQ
Sbjct: 542 E-----QEMATLQ----YTNPQLLEQLKIERLAQ 566
>sp|Q6NLV4|FY_ARATH Flowering time control protein FY OS=Arabidopsis thaliana GN=FY
PE=1 SV=1
Length = 647
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/409 (48%), Positives = 259/409 (63%), Gaps = 39/409 (9%)
Query: 41 NFNKNFHTPFRPFHKNPNQIMDPDFDGKKLRKSSMRKTVDYNAAVINALEARVWQRDYRD 100
N N ++H P PF N + F K++RK + R+ VDY + V+ ++AR WQRD RD
Sbjct: 28 NINPDYHHPSGPFDPNVD-----SFGAKRMRKHTQRRAVDYTSTVVRYIQARTWQRDSRD 82
Query: 101 RRALQPDVMYYPHMLPPPSFEDNATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRL---- 156
R LQP MLP ++ DN + + +FV A+ NK RC I + WTP GRRL
Sbjct: 83 RTTLQPTPAAAVDMLPTVAYSDNPSTSFAAKFVHASLNKNRCSINRVLWTPSGRRLITGS 142
Query: 157 --------------------AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTF 196
AHD +R MVWSHN +MV+ D G +KYWQ+NMNNVK
Sbjct: 143 QSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKAN 202
Query: 197 Q-GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKS 255
+ HKESIR +SF +D KF +CSDD TV+VWDF +C +E L GHG DVK VDWHP KS
Sbjct: 203 KTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWDFTKCVDESSLTGHGWDVKSVDWHPTKS 262
Query: 256 LIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDI 315
L+VSG KD Q VKLWD ++G+ L +LH HK+ V+ + WNQNGNWL+TAS+D ++K++DI
Sbjct: 263 LLVSGGKD--QLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDI 320
Query: 316 RNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNI 375
R + E+Q+FRGH K+ +++AWHP HE F SG +DGSI W VG + IP AHDN
Sbjct: 321 RTMK-ELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPNAHDNS 379
Query: 376 IWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDR------YNQKGL 418
+W +AWHP+G++L +GSNDH +KFW RNR D RD YN++G
Sbjct: 380 VWDLAWHPIGYLLCSGSNDHTTKFWCRNRPADNPRDVLMQNQGYNEQGF 428
>sp|Q9UTN4|PFS2_SCHPO Polyadenylation factor subunit 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pfs2 PE=4 SV=1
Length = 509
Score = 286 bits (732), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 167/469 (35%), Positives = 252/469 (53%), Gaps = 67/469 (14%)
Query: 61 MDPDFDGKKLRKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSF 120
M+ + + ++K R+TVDY + + + R + + +P+ ++ PP +
Sbjct: 1 MERAENARIIQKPMTRRTVDYGSGLSKYIVNRHLRSNRYHIHVPRPNPNQIINLYPPYEY 60
Query: 121 EDNATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRL------------------------ 156
+ N T+++ T+++ + NK R I + WTP+GRRL
Sbjct: 61 KYNNTSSLCTKYIHTSANKARHVINVVRWTPDGRRLLTGSSTGEFTLWNGLTFNFELINQ 120
Query: 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFA 216
+HD AVR WS +G W+++ D G +KY++ N+NNVK Q H+ +R ++FSP+DSKF
Sbjct: 121 SHDYAVRCAEWSTDGRWLISGDGGGMVKYFEPNLNNVKIVQAHEMEVRDVAFSPNDSKFV 180
Query: 217 TCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG 276
T SDDG+++VW+F+ TEE L GHG DVK VDWHP K L+ SGSKDN VK WDP+ G
Sbjct: 181 TASDDGSLKVWNFHMSTEELKLTGHGWDVKTVDWHPSKGLLASGSKDNL--VKFWDPRTG 238
Query: 277 QALATLHAHKSTVMDLAWNQN--GNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASA 334
+ATLH HK+T+M ++ +N N+L T SRD +VFD+R + +V+ RGH+K+ +
Sbjct: 239 TCIATLHGHKNTIMQASFQKNFGSNYLATVSRDSTCRVFDLRAM-KDVRVLRGHEKDVNC 297
Query: 335 VAWHPQHEGLFSSGGADGSIMFWHVGA----------DKE--------------VGCIPQ 370
V WHP + L ++GG+DGS+ + + +K IP
Sbjct: 298 VTWHPLYPNLLTTGGSDGSVNHYSLDEPPLLSQQKYHEKHPNVTLSASSYLLYPTAEIPF 357
Query: 371 AHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGD--PMRDRYNQKGLAHCITGVYNE 428
AHD IW+M +HPLGH+L TGSND ++FW+R+R D DR H + +E
Sbjct: 358 AHDLGIWSMQYHPLGHLLCTGSNDKTTRFWSRSRPDDKESTMDR-------HHLGEEQSE 410
Query: 429 EMELNDSAVIPGMGLEDEDSVFPSSEPLNEVGKSTSGPNTNDPSNIPGL 477
M A I E++D+ P PL E + P + N+PGL
Sbjct: 411 AMLSQRKAAI-----EEDDNYEPDENPLTETLANAHNPQFSGVLNLPGL 454
>sp|Q7RY68|PFS2_NEUCR Polyadenylation factor subunit 2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=pfs-2 PE=3 SV=2
Length = 660
Score = 285 bits (729), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/418 (38%), Positives = 230/418 (55%), Gaps = 64/418 (15%)
Query: 71 RKSSMRKTVDYNAAVINALEARVWQRDYRDRRA---LQPDVMYYPHMLPPPSFEDNATNA 127
R R DY A+V++ + R Q YR A +P Y MLPP + N ++
Sbjct: 25 RNRGRRPVTDYGASVVHYMRHR--QPRYRGSYAGEVERPSPSYIVDMLPPYARVTNPADS 82
Query: 128 VTTRFVKAATNKMRCPIFSMTWTPEGRRL------------------------AHDCAVR 163
V +R + ++ NK++ PI + WTPEGRRL AHD A+R
Sbjct: 83 VPSRHLHSSLNKIKHPINVVRWTPEGRRLLTASSSGEFTLWNGTGFNFETIMQAHDSAIR 142
Query: 164 HMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGT 223
+V+SH+ W+V++DH G IKYWQ N NNV++ +GH + IR ++FSP+D+KF T SDD T
Sbjct: 143 ALVYSHSDDWLVSADHDGIIKYWQPNFNNVESIRGHTDPIRDLAFSPNDTKFVTASDDQT 202
Query: 224 VRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLH 283
++V+DF + + L GHG D K DWHP + LIVSGSKD+ VKLWDP+ G+ L TLH
Sbjct: 203 LKVFDFAGGSTDMTLTGHGWDAKSCDWHPSRGLIVSGSKDHL--VKLWDPRTGRCLTTLH 260
Query: 284 AHKSTVMDLAWNQ-NGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHE 342
HK+T+ + + GN L T++RD +VFD+R + ++ RGH+K+ S + WHP H
Sbjct: 261 GHKNTITKTLFERVQGNCLATSARDQTARVFDLR-MMRDIALLRGHEKDISTLTWHPVHS 319
Query: 343 GLFSSGGADGSIMFWHV-------------------GADKEVG---------CIPQAHDN 374
L S+GG+DGS+ + + AD IP AHD
Sbjct: 320 NLLSTGGSDGSLFHYLLDEPNTAPDGSVMPIPAVYDTADPSSAPAQPIYPAHKIPYAHDF 379
Query: 375 IIWTMAWHPLGHILATGSNDHASKFWTRNRLGDP---MRDRYNQKGLAHCITGVYNEE 429
IW++ WHPLGHILA+GSND ++FW+R R G+ DRY+ A G ++
Sbjct: 380 AIWSLDWHPLGHILASGSNDRITRFWSRARPGEAPESFNDRYHIGEAAAEAQGTWDRR 437
>sp|Q4I7X1|PFS2_GIBZE Polyadenylation factor subunit 2 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PFS2 PE=3
SV=1
Length = 612
Score = 272 bits (696), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 153/399 (38%), Positives = 218/399 (54%), Gaps = 69/399 (17%)
Query: 76 RKTVDYNAAVINALEARVWQRD----YR---DRRALQPDVMYYPHMLPPPSFEDNATNAV 128
R DY A + + WQ D Y+ A +P Y MLPP + A +++
Sbjct: 29 RPVTDYGATITH------WQHDRAPGYKGGYTGEAERPSASYIVDMLPPAARVTKAADSI 82
Query: 129 TTRFVKAATNKMRCPIFSMTWTPEGRRL------------------------AHDCAVRH 164
+ + ++ NK++ PI + WTPEGRRL AHD A+R
Sbjct: 83 PIKHLHSSLNKIKHPINVVRWTPEGRRLLTASTSGEFTLWNGTGFNFETIMQAHDSAIRA 142
Query: 165 MVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTV 224
+ +SH+ W++++DH G +KYWQ N NNV++ H + IR ++FSPSDSKF T SDD T+
Sbjct: 143 LEYSHSDDWLISADHDGAVKYWQPNFNNVQSINAHTDPIRDLAFSPSDSKFVTASDDSTL 202
Query: 225 RVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHA 284
+++DF E L GHG D K VDWHP K L+VSGSKD+ VKLWDP+ + L TLH
Sbjct: 203 KIFDFALGQMESKLEGHGWDAKSVDWHPTKGLLVSGSKDHL--VKLWDPRTSRCLTTLHG 260
Query: 285 HKSTVMDLAWNQ-NGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEG 343
HKST+ + + + G L T++RD +VFD+R + ++ +GH+K+ S + WHP H
Sbjct: 261 HKSTITKVLFEKVRGACLATSARDQTARVFDLR-MMRDICLLKGHEKDISTLTWHPVHPN 319
Query: 344 LFSSGGADGSIMFWHV-------GADKEVG-------------------CIPQAHDNIIW 377
L S+GG DGS+ + + G V +P AHD IW
Sbjct: 320 LLSTGGMDGSLFHYLLDSPNPPPGQSFTVAPYDSPDPTTVPAQSVWPTHKVPYAHDYAIW 379
Query: 378 TMAWHPLGHILATGSNDHASKFWTRNRLGDP--MRDRYN 414
++ WHPLGHILA+GSND ++FW+R R GD +DRY+
Sbjct: 380 SLDWHPLGHILASGSNDRITRFWSRARPGDAEVFQDRYH 418
Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 29/192 (15%)
Query: 174 MVTSDHQGYIKYWQSNMNN-VKTFQGHKESIRGISFSPSD-SKFATCSDDGTVRVWDFYR 231
+V+ +K W + + T GHK +I + F + AT + D T RV+D
Sbjct: 235 LVSGSKDHLVKLWDPRTSRCLTTLHGHKSTITKVLFEKVRGACLATSARDQTARVFDLRM 294
Query: 232 CTEEKVLRGHGADVKCVDWHPYK-SLIVSGSKDNQQPVKLWD---PKAGQALATL----- 282
+ +L+GH D+ + WHP +L+ +G D L D P GQ+
Sbjct: 295 MRDICLLKGHEKDISTLTWHPVHPNLLSTGGMDGSLFHYLLDSPNPPPGQSFTVAPYDSP 354
Query: 283 -----------------HAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD-IRNLSSEVQT 324
+AH + L W+ G+ L + S D + + + R +EV
Sbjct: 355 DPTTVPAQSVWPTHKVPYAHDYAIWSLDWHPLGHILASGSNDRITRFWSRARPGDAEVFQ 414
Query: 325 FRGHKKEASAVA 336
R H EA+A A
Sbjct: 415 DRYHIGEAAAEA 426
>sp|P0CS47|PFS2_CRYNB Polyadenylation factor subunit 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=PFS2 PE=3 SV=1
Length = 713
Score = 268 bits (684), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 133/363 (36%), Positives = 207/363 (57%), Gaps = 30/363 (8%)
Query: 69 KLRKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAV 128
+ RK R+TVDY V + + R A+ P+ + LPP + N + ++
Sbjct: 61 RKRKIKPRRTVDYQGGVQKWRMLNKLKGVHEFRPAIHPNPSDIVNFLPPVALRSNPSTSI 120
Query: 129 TTRFVKAATNKMRCPIFSMTWTPEGRRL------------------------AHDCAVRH 164
+V + NK R P + WTP+ RRL HD ++R
Sbjct: 121 CDYWVHTSINKERSPTRVVRWTPDARRLLTGNDKGQFTLWNGASFNYESITQVHDDSIRS 180
Query: 165 MVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTV 224
+SHNG +V++D G IKY+ ++ N+ FQGH+E+ +S+SP+D +F TC DDG V
Sbjct: 181 FTYSHNGQALVSADKGGTIKYFTPHLTNIHGFQGHREACHDVSWSPNDERFVTCGDDGLV 240
Query: 225 RVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHA 284
++W + EE+ L GHG DV+CVDWHP K LIVSGSKD VK WDP+ G+ L+TLH+
Sbjct: 241 KIWSYREAKEERSLSGHGWDVRCVDWHPTKGLIVSGSKD--MLVKFWDPRTGKDLSTLHS 298
Query: 285 HKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGL 344
KST+ W+ +G+ + TA +D ++++FDIR E++ +GH+KE + + WHP H L
Sbjct: 299 SKSTINTCRWSPDGHLVATAGQDSVIRLFDIRTF-RELEVLKGHEKEVNCIEWHPIHHSL 357
Query: 345 FSSGGADGSIMFWHVGA---DKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWT 401
SG A G+I ++ + + + + AH++ ++++++HPLGHIL +GS D ++FW
Sbjct: 358 LVSGDALGTINYFSLLSPTPSTPITTLSAAHEDAVFSLSFHPLGHILCSGSKDFTARFWC 417
Query: 402 RNR 404
R R
Sbjct: 418 RAR 420
>sp|P0CS46|PFS2_CRYNJ Polyadenylation factor subunit 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PFS2 PE=3 SV=1
Length = 712
Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 133/363 (36%), Positives = 207/363 (57%), Gaps = 30/363 (8%)
Query: 69 KLRKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAV 128
+ RK R+TVDY V + + R A+ P+ + LPP + N + ++
Sbjct: 61 RKRKIKPRRTVDYQGGVQKWRMLNKLKGVHEFRPAIHPNPSDIVNFLPPVALRSNPSTSI 120
Query: 129 TTRFVKAATNKMRCPIFSMTWTPEGRRL------------------------AHDCAVRH 164
+V + NK R P + WTP+ RRL HD ++R
Sbjct: 121 CDYWVHTSINKERSPTRVVRWTPDARRLLTGNDKGQFTLWNGASFNYESITQVHDDSIRS 180
Query: 165 MVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTV 224
+SHNG +V++D G IKY+ ++ N+ FQGH+E+ +S+SP+D +F TC DDG V
Sbjct: 181 FTYSHNGQALVSADKGGTIKYFTPHLTNIHGFQGHREACHDVSWSPNDERFVTCGDDGLV 240
Query: 225 RVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHA 284
++W + EE+ L GHG DV+CVDWHP K LIVSGSKD VK WDP+ G+ L+TLH+
Sbjct: 241 KIWSYREAKEERSLSGHGWDVRCVDWHPTKGLIVSGSKD--MLVKFWDPRTGKDLSTLHS 298
Query: 285 HKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGL 344
KST+ W+ +G+ + TA +D ++++FDIR E++ +GH+KE + + WHP H L
Sbjct: 299 SKSTINTCRWSPDGHLVATAGQDSVIRLFDIRTF-RELEVLKGHEKEVNCIEWHPIHHSL 357
Query: 345 FSSGGADGSIMFWHVGA---DKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWT 401
SG A G+I ++ + + + + AH++ ++++++HPLGHIL +GS D ++FW
Sbjct: 358 LVSGDALGTINYFSLLSPTPSTPITTLSAAHEDAVFSLSFHPLGHILCSGSKDFTARFWC 417
Query: 402 RNR 404
R R
Sbjct: 418 RAR 420
>sp|Q6CGP9|PFS2_YARLI Polyadenylation factor subunit 2 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=PFS2 PE=3 SV=1
Length = 532
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 158/491 (32%), Positives = 237/491 (48%), Gaps = 100/491 (20%)
Query: 67 GKKLRKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVM-----YYPHMLPPPSFE 121
G++ R+ + R+TVD+ +A W D R +QP M Y +LPP ++
Sbjct: 60 GEEDRRPAHRRTVDHGSAFGK------WHLDRLSGRTIQPANMRSEQSYIVDLLPPSAYT 113
Query: 122 D------------NATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRL------------- 156
+ + A +F++ A NK+R P++S TWTP+GRRL
Sbjct: 114 NINGSLRSTNPHITSVAATPAKFIQVALNKVRHPVYSATWTPDGRRLLTGSMSGEFTLWN 173
Query: 157 -----------AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTF-QGHKESIR 204
AH+ VR + +SH+G W+++ DH+G +K+WQ ++N V + H+ESIR
Sbjct: 174 GMTFNFESIMQAHESGVRSLKYSHSGEWLLSGDHEGNVKFWQPSLNCVNVIDKAHRESIR 233
Query: 205 GISFSPSDSKFATCSDDGTVRVWDFYRCT-EEKVLRGHGADVKCVDWHPYKSLIVSGSKD 263
++F+PSD KF T SDDG +++WDF+ + E VL+GHG DVK VDWH LIVSGSKD
Sbjct: 234 ELAFAPSDHKFVTGSDDGLLKIWDFHESSNAESVLKGHGWDVKSVDWHSELGLIVSGSKD 293
Query: 264 NQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGN--WLVTASRDHLLKVFDIRNLSS- 320
N +KLWDP++ + + T H K+TVM + G L RD ++ D+R L+S
Sbjct: 294 NL--IKLWDPRSAKNVNTFHGFKNTVMKTTFQPTGTKRLLAAGCRDRTCRILDLRMLNSG 351
Query: 321 ------------------EVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGAD 362
+ RGH + ++ WHP H + +SG GSI ++V
Sbjct: 352 SSEAGPTAGTDMPTRGDRSMAVLRGHDSDVFSLTWHPTHANVVTSGTKTGSIYTFNVDTT 411
Query: 363 KE------------VGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDP-- 408
V IP AHD + T+ +HP GH+L +G D ++FW R R GDP
Sbjct: 412 PAGGAYGPDSGILPVNTIPSAHDYCVSTLDYHPEGHVLCSGGLDRMTRFWARPRPGDPTS 471
Query: 409 MRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSEPLNEVGKSTSGPNT 468
RD+Y Y + E +PG+ + E ++ +T+ P
Sbjct: 472 FRDKY------------YEPKEEGVSVKTLPGVNNATSRAGMARVEHVSTQHFNTAQPEV 519
Query: 469 ND--PSNIPGL 477
D P +IPG
Sbjct: 520 TDDEPVSIPGF 530
>sp|Q6CP71|PFS2_KLULA Polyadenylation factor subunit 2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=PFS2 PE=3 SV=1
Length = 452
Score = 246 bits (628), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 209/381 (54%), Gaps = 39/381 (10%)
Query: 61 MDPDFDGKKLRK-SSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPS 119
MDP+ +G +K +S R+T+D +A+ + + + ++ + Y H+LPP +
Sbjct: 1 MDPNTEGTTTKKYTSQRRTIDISASYDRLYFLK--KHGQENSSYIEAETSYNAHILPPDA 58
Query: 120 --FEDNATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRL--------------------- 156
F +A N T +F ++NK++ I ++TWTPEGRRL
Sbjct: 59 YGFHGHAINTAT-KFTHLSSNKVKHVIPALTWTPEGRRLVVATYNGEFSLWSGSSFNFES 117
Query: 157 ---AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTF-QGHKESIRGISFSPSD 212
AHD AV M +SH G WMV+ G +K WQ N N VK Q H E +R ISFSP+D
Sbjct: 118 IMQAHDSAVTVMTYSHTGDWMVSGSADGELKIWQPNFNMVKVMDQAHMECVREISFSPTD 177
Query: 213 SKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWD 272
KF +CSDD +++W+F +E+VL GH DVK DWHP LIVSGSKDN +K WD
Sbjct: 178 QKFVSCSDDNVLKIWNFSNGQQERVLSGHHWDVKSCDWHPKMGLIVSGSKDNL--IKFWD 235
Query: 273 PKAGQALATLHAHKSTVMDLAWN-QNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKE 331
P++G ++T+ K T++ + + GN L S+D KV+DIR + E+ + R +
Sbjct: 236 PRSGSCVSTMLGFKHTIISTKFQPKQGNLLSVISKDKTCKVYDIRQQAKELFSVRD-DVD 294
Query: 332 ASAVAWHPQHEGLFSSGGADGSIMFWHVGADKE----VGCIPQAHDNIIWTMAWHPLGHI 387
+ WHP E +F+ G DGSI + + + + IP AH+ + ++A+ P+GHI
Sbjct: 295 YMTLQWHPIDETVFTVGCYDGSIKHFDLSQENQPNKPTHNIPYAHEKCVTSLAYSPIGHI 354
Query: 388 LATGSNDHASKFWTRNRLGDP 408
+A+ S D +FWTR+R DP
Sbjct: 355 MASASKDRTIRFWTRSRAVDP 375
>sp|Q2TZG4|PFS2_ASPOR Polyadenylation factor subunit 2 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=pfs2 PE=3 SV=1
Length = 610
Score = 246 bits (627), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 143/404 (35%), Positives = 211/404 (52%), Gaps = 74/404 (18%)
Query: 76 RKTVDYNAAVINALEARVWQRDYRDR-------RALQPDVMYYPHMLPPPSFEDNATNAV 128
R DY ++++ W R R R +P Y MLPP + + + +
Sbjct: 32 RLVTDYGSSLVQ------WMRTRRPRYKGGHRMETERPSASYIVDMLPPLARIHSPVDTI 85
Query: 129 TTRFVKAATNKMRCPIFSMTWTPEGRRL------------------------AH----DC 160
R + + K + PI + WTPEGRRL AH
Sbjct: 86 PVRHLHQSIGKSKKPITVVRWTPEGRRLLTGGHTGEFMLWNGTAFNFETVMDAHYDQLQA 145
Query: 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQ-GHKESIRGISFSPSDSKFATCS 219
V + WSH+ W+++ +G IKYW+ N NNV+T H +++R +++SPSD+KF + S
Sbjct: 146 GVTSLAWSHSHDWLISGGQKGDIKYWRPNFNNVETIDDAHHDAVRDLAWSPSDTKFLSAS 205
Query: 220 DDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQAL 279
DD T++++DF T + VL GH DVK DWHP K L+VSGSKD+Q VK WDP+ + L
Sbjct: 206 DDTTLKIFDFTSRTADTVLTGHNWDVKSCDWHPTKGLLVSGSKDHQ--VKFWDPRTARCL 263
Query: 280 ATLHAHKSTVMDLAWNQ-NGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWH 338
TLH+HK+TV +++ N N L T+SRD +VFD+R + ++ RGH+K S++ WH
Sbjct: 264 TTLHSHKNTVTATRFSRVNQNLLATSSRDQTARVFDLR-MMRDICILRGHEKPVSSLTWH 322
Query: 339 PQHEGLFSSGGADGSIMFWHVGA-DKEVGCIPQ-------------------------AH 372
P H L S+G DGS+ + + + G IP AH
Sbjct: 323 PIHSSLISTGSEDGSLYHYLLDEPNVPSGQIPTIAPYDSPDPANTPAQVIYPAHRVQYAH 382
Query: 373 DNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDP--MRDRYN 414
IW++ WHPLGHILA+GS D+ ++FW+R R G+ M+DR++
Sbjct: 383 SATIWSLDWHPLGHILASGSKDNFTRFWSRARPGETSYMKDRFH 426
>sp|Q6BVZ3|PFS2_DEBHA Polyadenylation factor subunit 2 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=PFS2 PE=3 SV=2
Length = 504
Score = 244 bits (624), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/394 (35%), Positives = 203/394 (51%), Gaps = 60/394 (15%)
Query: 71 RKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNA--- 127
+K++ R+TVD+ + R D + ++P+ Y +LP P++ N+
Sbjct: 43 KKTAYRRTVDHGNNMGRWYINRSLGIDDQPIGKIRPESSYLIDLLPSPAYASNSVRENKN 102
Query: 128 ------VTTRFVKAATNKMRCPIFSMTWTPEGRRL------------------------A 157
+ T+FV ++NK + I ++ WTPEGRRL A
Sbjct: 103 NMSIMDIQTKFVHLSSNKAKHSINTVKWTPEGRRLLVASHSGEFTVWNGMTFNFETIMQA 162
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFAT 217
HD A+ + +SHN W+++ D G IKYWQ+N NNV GH + IR I+FSP+DSKF T
Sbjct: 163 HDSAILSLKYSHNDEWLLSGDQSGVIKYWQTNFNNVNIINGHSDGIRDIAFSPNDSKFLT 222
Query: 218 CSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQ 277
CSDD T+++W+F EE+ L GH DVK DWHP LIVSGSKDN +KLWDP+A
Sbjct: 223 CSDDSTMKIWNFNNGQEERSLVGHHWDVKSADWHPNLGLIVSGSKDN--LIKLWDPRASS 280
Query: 278 ALATLHAHKSTVMDLAWNQNGN--WLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAV 335
++TLH K T+ + G L + SRD ++FD+R + ++ R H+ + S V
Sbjct: 281 CVSTLHGFKHTITKTKFQPTGTKRLLASVSRDKSCRIFDLRTM-KDILVIRDHETDLSCV 339
Query: 336 AWHPQHEGLFSSGGADGSIMFWHVGADKEVGC--------------------IPQAHDNI 375
WHP H + ++ DGS+ H D + IP AH+
Sbjct: 340 EWHPVHPSMITTAAYDGSMN--HYIMDSYISDNNIKNDSNNNSTSPIEASHKIPYAHEKA 397
Query: 376 IWTMAWHPLGHILATGSNDHASKFWTRNRLGDPM 409
I + +HPLGH+L + D +++FW+R R DPM
Sbjct: 398 IHALEYHPLGHLLCSAGADRSARFWSRARPNDPM 431
>sp|Q5AZX0|PFS2_EMENI Polyadenylation factor subunit 2 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=pfs2 PE=3 SV=1
Length = 567
Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 205/377 (54%), Gaps = 47/377 (12%)
Query: 76 RKTVDYNAAVINALEARVWQRDYRDR-------RALQPDVMYYPHMLPPPSFEDNATNAV 128
R DY ++++ W R+ R + +P Y MLPP + + +++
Sbjct: 28 RLVTDYGSSMVQ------WMRNRRPKYQGGHRMETERPSASYMVDMLPPLARIHSPVDSI 81
Query: 129 TTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAV-RHMVWSHNGLWMVTSDHQGYIKYWQ 187
R + + K + PI + WTPEGRRL M+W+ T +G +KYW+
Sbjct: 82 PVRHLHQSIGKSKKPITVVRWTPEGRRLLTGGHTGEFMLWNGTAFNFETVMDKGDVKYWR 141
Query: 188 SNMNNVKTFQ-GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVK 246
N NNV+T H +++R +++SPSD+KF + SDD T++++DF T + VL GH DVK
Sbjct: 142 PNFNNVETIDDAHHDAVRDLAWSPSDTKFLSASDDTTLKIYDFTARTCDTVLTGHNWDVK 201
Query: 247 CVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQ-NGNWLVTAS 305
DWHP K L+VSGSKD+Q VK WDP+ + L TLH+HK+TV +++ N N L T+S
Sbjct: 202 SCDWHPTKGLLVSGSKDHQ--VKFWDPRTARCLTTLHSHKNTVTATKFSRVNNNLLATSS 259
Query: 306 RDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGA-DKE 364
RD +VFD+R + ++ RGH+K S + WHP H L S+G DGS+ + + +
Sbjct: 260 RDQTARVFDLR-MMRDICILRGHEKPISTLTWHPVHCSLISTGSEDGSLYHYLLDEPNLP 318
Query: 365 VGCIPQ-------------------------AHDNIIWTMAWHPLGHILATGSNDHASKF 399
G IP AH IWT+ WHPLGHILA+GS D+ ++F
Sbjct: 319 AGQIPTVAPYDSPDPANTPAQVIYPAHRIQYAHAATIWTLDWHPLGHILASGSKDNFTRF 378
Query: 400 WTRNRLGDP--MRDRYN 414
W+R R G+ ++DR++
Sbjct: 379 WSRARPGETSYLKDRFH 395
>sp|Q75AV4|PFS2_ASHGO Polyadenylation factor subunit 2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PSF2
PE=3 SV=1
Length = 449
Score = 238 bits (606), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 207/380 (54%), Gaps = 38/380 (10%)
Query: 61 MDPDFDGKKLRKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSF 120
M+ DG + S R+TVD ++ +++ R +QP+ Y ++PP ++
Sbjct: 1 MNSANDGSVKKYVSQRRTVDMSSPYD---RLYFYKKHAIPLRTIQPESTYTADIMPPDAY 57
Query: 121 EDNATNA-VTTRFVKAATNKMRCPIFSMTWTPEGRRL----------------------- 156
D+ + T+F ++NK++ I ++TWTPEGRRL
Sbjct: 58 RDHRRVLNIPTKFTHLSSNKVKHVIPAITWTPEGRRLVVATYSGEFSLWNGSSFNFESIM 117
Query: 157 -AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTF-QGHKESIRGISFSPSDSK 214
AHD AV M +SH G W+++ D G IK WQ N N VK + H E +R ISFS SD K
Sbjct: 118 QAHDSAVTVMQYSHAGDWLISGDADGTIKIWQPNFNMVKVLDRAHTECMRDISFSYSDQK 177
Query: 215 FATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPK 274
F TCSDD +++W+F +E+VL GH DVK DWHP LIVSGSKDN +KLWDP+
Sbjct: 178 FVTCSDDNVLKIWNFSNGQQERVLSGHHWDVKSCDWHPKMGLIVSGSKDNL--IKLWDPR 235
Query: 275 AGQALATLHAHKSTVMDLAWN-QNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEAS 333
G+ ++T+ K TV+ + GN L S+D +K++D+R E+QT R S
Sbjct: 236 TGRNVSTILGLKHTVIKTKFQPTQGNLLAVVSKDKSIKIYDMRQHMRELQTIRDDMDYMS 295
Query: 334 AVAWHPQHEGLFSSGGADGSIM---FWHVGADKEVGC--IPQAHDNIIWTMAWHPLGHIL 388
++WHP +E +FS G +G+I H ++ C IP AH+ + ++A+ P+GHIL
Sbjct: 296 -LSWHPINETIFSVGCYNGAIKHFDLLHDNSNSTPACHTIPYAHEKSVTSLAYSPVGHIL 354
Query: 389 ATGSNDHASKFWTRNRLGDP 408
A+ + D +FW R+R DP
Sbjct: 355 ASAAKDRTIRFWARSRPVDP 374
>sp|Q4X1Y0|PFS2_ASPFU Polyadenylation factor subunit 2 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pfs2
PE=3 SV=1
Length = 510
Score = 230 bits (587), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/338 (38%), Positives = 191/338 (56%), Gaps = 42/338 (12%)
Query: 114 MLPPPSFEDNATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAV-RHMVWSHNGL 172
MLPP + + + + R + + K + PI + WTPEGRRL M+W+
Sbjct: 1 MLPPLARIHSPADTIPVRHLHQSIGKSKKPITVVRWTPEGRRLLTGGHTGEFMLWNGTAF 60
Query: 173 ----WMVTSDHQGYIKYWQSNMNNVKTFQ-GHKESIRGISFSPSDSKFATCSDDGTVRVW 227
M +G IKYW+ N NNV+T H +++R +++SPSD+KF + SDD T++++
Sbjct: 61 NFETVMDVRGQKGDIKYWRPNFNNVETIDDAHHDAVRDLAWSPSDTKFLSASDDTTLKIF 120
Query: 228 DFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKS 287
DF T + VL GH DVK DWHP K L+VSGSKD+Q VK WDP+ + L TLH+HK+
Sbjct: 121 DFTARTADTVLTGHNWDVKSCDWHPTKGLLVSGSKDHQ--VKFWDPRTARCLTTLHSHKN 178
Query: 288 TVMDLAWNQ-NGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFS 346
TV +++ N N L T+SRD +VFD+R + ++ RGH+K S++ WHP H L S
Sbjct: 179 TVTTTRFSRVNSNLLATSSRDQTARVFDLR-MMRDICILRGHEKPISSLTWHPIHSSLIS 237
Query: 347 SGGADGSIMFWHVGADK---EVGCIPQ-------------------------AHDNIIWT 378
+G DGS+ +H D+ G +P AH IW+
Sbjct: 238 TGSEDGSL--YHYLLDEPNLPSGQVPTIAPYDSPDPANTPAQVIYPAHRIQYAHSATIWS 295
Query: 379 MAWHPLGHILATGSNDHASKFWTRNRLGDP--MRDRYN 414
+ WHPLGHILA+GS D+ ++FW+R R G+ M+DR++
Sbjct: 296 LDWHPLGHILASGSKDNFTRFWSRARPGETSYMKDRFH 333
>sp|Q6FJS0|PFS2_CANGA Polyadenylation factor subunit 2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=PFS2 PE=3 SV=1
Length = 455
Score = 229 bits (585), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 199/357 (55%), Gaps = 35/357 (9%)
Query: 104 LQPDVMYYPHMLPPPSFEDNATNA-VTTRFVKAATNKMRCPIFSMTWTPEGRRL------ 156
++P+ + +++PP +++ N + T+F ++NK++ I ++ W+PEGRRL
Sbjct: 44 IEPETSFTANIMPPDAYKRNDRIVNLPTKFTHLSSNKVKHVIPAIQWSPEGRRLIVATFS 103
Query: 157 ------------------AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTF-Q 197
AHD +V M +SH G WM++ D G IK WQ N N VK +
Sbjct: 104 GEFSLWNGSSFTFETIMQAHDTSVTTMKYSHAGDWMISGDADGTIKIWQPNFNMVKELDR 163
Query: 198 GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLI 257
H E IR ++FS +DSKF TCSDD +++W+F +E+VL GH DV+ DWHP LI
Sbjct: 164 IHTEGIRDVAFSNNDSKFVTCSDDNILKIWNFSNGQQERVLSGHHWDVRSCDWHPELGLI 223
Query: 258 VSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWN-QNGNWLVTASRDHLLKVFDIR 316
VSGSKDN VKLWDP++GQ ++TL K TV+ + GN L S+D +VFD+R
Sbjct: 224 VSGSKDNL--VKLWDPRSGQCVSTLLKFKHTVLKTRFQPTKGNLLAAISKDKSCRVFDLR 281
Query: 317 NLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKE--VGCIPQAHDN 374
+E+ R + + + W +E +F+ G DGS+ + +G D E + IP AH+
Sbjct: 282 ASMNELMCVRD-EVDFMELEWSTINESMFTVGCYDGSLKHFDLGQDTEKPIHIIPFAHEK 340
Query: 375 IIWTMAWHPLGHILATGSNDHASKFWTRNRLGDP--MRD-RYNQKGLAHCITGVYNE 428
I +A++P+GHILAT + D +FWTR R DP D YN K + G+ N+
Sbjct: 341 CISAIAYNPVGHILATAAKDRTIRFWTRARPVDPNAFDDPTYNNKKMTGWFFGINND 397
>sp|P42841|PFS2_YEAST Polyadenylation factor subunit 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PFS2 PE=1 SV=1
Length = 465
Score = 226 bits (576), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 200/371 (53%), Gaps = 49/371 (13%)
Query: 74 SMRKTVDYNAAVINALEARVWQRDYRDRR------ALQPDVMYYPHMLPPPSFE--DNAT 125
+ R++VD ++ IN Y +RR ++P+ Y ++PP ++ D
Sbjct: 28 TQRRSVDVSSPYINL---------YYNRRHGLPNLVVEPETSYTIDIMPPNAYRGRDRVI 78
Query: 126 NAVTTRFVKAATNKMRCPIFSMTWTPEGRRL------------------------AHDCA 161
N + ++F ++NK++ I ++ WTPEGRRL AHD A
Sbjct: 79 N-LPSKFTHLSSNKVKHVIPAIQWTPEGRRLVVATYSGEFSLWNASSFTFETLMQAHDSA 137
Query: 162 VRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQG-HKESIRGISFSPSDSKFATCSD 220
V M +SH+ WM++ D G IK WQ N + VK H ESIR ++FS +DSKF TCSD
Sbjct: 138 VTTMKYSHDSDWMISGDADGMIKIWQPNFSMVKEIDAAHTESIRDMAFSSNDSKFVTCSD 197
Query: 221 DGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALA 280
D +++W+F +E+VL GH DVK DWHP LI S SKDN VKLWDP++G ++
Sbjct: 198 DNILKIWNFSNGKQERVLSGHHWDVKSCDWHPEMGLIASASKDNL--VKLWDPRSGNCIS 255
Query: 281 TLHAHKSTVMDLAWN-QNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHP 339
++ K TV+ + GN L+ S+D +VFDIR E+ R + + + WHP
Sbjct: 256 SILKFKHTVLKTRFQPTKGNLLMAISKDKSCRVFDIRYSMKELMCVRD-ETDYMTLEWHP 314
Query: 340 QHEGLFSSGGADGSIMFWHV--GADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHAS 397
+E +F+ DGS+ + + ++ + IP AHD I +++++P+GHI AT + D
Sbjct: 315 INESMFTLACYDGSLKHFDLLQNLNEPILTIPYAHDKCITSLSYNPVGHIFATAAKDRTI 374
Query: 398 KFWTRNRLGDP 408
+FWTR R DP
Sbjct: 375 RFWTRARPIDP 385
>sp|Q59WJ4|PFS2_CANAL Polyadenylation factor subunit 2 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=PFS2 PE=3 SV=1
Length = 543
Score = 220 bits (561), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/447 (31%), Positives = 214/447 (47%), Gaps = 80/447 (17%)
Query: 103 ALQPDVMYYPHMLPPPSFEDN------------ATNAVTTRFVKAATNKMRCPIFSMTWT 150
++P+ Y +LP ++ + A + T+FV ++NK++ I ++ WT
Sbjct: 85 TIRPESSYLIDLLPSLAYSSSFNLNRRNNKNNLAVLDLQTKFVHLSSNKVKHTINTVKWT 144
Query: 151 PEGRRL------------------------AHDCAVRHMVWSHNGLWMVTSDHQGYIKYW 186
PEGRRL AH+ + M +S++ W+++ D G +KYW
Sbjct: 145 PEGRRLLVASHSGEFTLWNGMTFNFETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYW 204
Query: 187 QSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVK 246
Q N NNV H +R I+FSP+DSKF TC DD +++W+F EE+ L GH +VK
Sbjct: 205 QPNFNNVNNISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVK 264
Query: 247 CVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGN--WLVTA 304
DWHP LIVSGSKDN VKLWDP++ ++TLH K TV + NG L +
Sbjct: 265 SADWHPNLGLIVSGSKDN--LVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASV 322
Query: 305 SRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGA--- 361
SRD ++FD+R + ++ R + + S VAWHP H + ++ +GSI + + +
Sbjct: 323 SRDRSCRIFDLRTM-KDMLVIRDSETDLSCVAWHPIHASMVTTAAYNGSISNFLLDSYIP 381
Query: 362 -----------------------DKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASK 398
V IP AH+ I + +HPLGH+L T +D ++
Sbjct: 382 DSNESVPKRSNNNSNLSTNTNNTIDAVQKIPYAHEKAIHAVEYHPLGHLLCTAGSDKTAR 441
Query: 399 FWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVI--PGMGLEDEDSVFPSSEPL 456
FW+R R DPM + G + + N +AV+ P ++D + +PL
Sbjct: 442 FWSRARPNDPM--AWKDAVYTDSKAGAWYYSVNNNVNAVMEDPNAVKNEDDETANNDDPL 499
Query: 457 NE------VGKSTSGPNTNDPSNIPGL 477
+ VG S SG D ++PGL
Sbjct: 500 SNSGRRRGVGASASG---GDTGSVPGL 523
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 122/244 (50%), Gaps = 7/244 (2%)
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQ-SNMNNVKTFQGHKESIRGISFSPSDSKFA 216
H VR + +S +G + + ++ W + F+GH + I+FSP S A
Sbjct: 500 HTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVA 559
Query: 217 TCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG 276
+ S DGT R+W+ TE VL+GH V V + P S++ SGS+D ++LWD G
Sbjct: 560 SGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGT--IRLWDVATG 617
Query: 277 QALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVA 336
+ L A V+ LA++ +G+ LV S D + ++D+ + + TF GH AVA
Sbjct: 618 KERDVLQAPAENVVSLAFSPDGSMLVHGS-DSTVHLWDVAS-GEALHTFEGHTDWVRAVA 675
Query: 337 WHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHA 396
+ P L +SG D +I W V A +E + + H + ++A+HP G LA+ S D
Sbjct: 676 FSPDG-ALLASGSDDRTIRLWDVAAQEEHTTL-EGHTEPVHSVAFHPEGTTLASASEDGT 733
Query: 397 SKFW 400
+ W
Sbjct: 734 IRIW 737
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 6/206 (2%)
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQ-SNMNNVKTFQGHKESIRGISFSPSDSKFA 216
H V + +S +G + + G + W + +GH + + ++FSP S A
Sbjct: 542 HTHYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVA 601
Query: 217 TCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG 276
+ S DGT+R+WD E VL+ +V + + P S++V GS V LWD +G
Sbjct: 602 SGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDST---VHLWDVASG 658
Query: 277 QALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVA 336
+AL T H V +A++ +G L + S D ++++D+ E T GH + +VA
Sbjct: 659 EALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAA-QEEHTTLEGHTEPVHSVA 717
Query: 337 WHPQHEGLFSSGGADGSIMFWHVGAD 362
+HP+ L +S DG+I W + +
Sbjct: 718 FHPEGTTL-ASASEDGTIRIWPIATE 742
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 82/193 (42%), Gaps = 34/193 (17%)
Query: 91 ARVWQRDYRDRRAL---QPDVMYYPHMLPPPSFEDNATNAVTTRFVKAATNK----MRCP 143
AR+W A+ D +Y P S + + T R AT K ++ P
Sbjct: 567 ARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAP 626
Query: 144 ---IFSMTWTPEGRRLAH--DCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQG 198
+ S+ ++P+G L H D V LW V S + TF+G
Sbjct: 627 AENVVSLAFSPDGSMLVHGSDSTVH--------LWDVASGEA------------LHTFEG 666
Query: 199 HKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIV 258
H + +R ++FSP + A+ SDD T+R+WD E L GH V V +HP + +
Sbjct: 667 HTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHPEGTTLA 726
Query: 259 SGSKDNQQPVKLW 271
S S+D +++W
Sbjct: 727 SASEDGT--IRIW 737
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 131/243 (53%), Gaps = 10/243 (4%)
Query: 162 VRHMVWSHNGLWMVTSDHQGYIKYWQ-SNMNNVKTFQGHKESIRGISFSPSDSKFATCSD 220
VR +V+S NG+ + ++ W S+ + T QGH + ++FSP + A+ S
Sbjct: 1119 VRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSG 1178
Query: 221 DGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALA 280
D TVR+WD +L+GH + V V ++P S + SGS D Q V+LW+ + + L
Sbjct: 1179 DQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSD--QTVRLWEINSSKCLC 1236
Query: 281 TLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQ 340
T H S V + +N +G+ L + S D ++++DI + S + TF+GH ++VA++P
Sbjct: 1237 TFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISS-SKCLHTFQGHTNWVNSVAFNPD 1295
Query: 341 HEGLFSSGGADGSIMFWHVGADKEVGCIP--QAHDNIIWTMAWHPLGHILATGSNDHASK 398
+ +SG D ++ W + + K C+ Q H + + ++ + P G +LA+GS+D +
Sbjct: 1296 G-SMLASGSGDQTVRLWEISSSK---CLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVR 1351
Query: 399 FWT 401
W+
Sbjct: 1352 LWS 1354
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 130/263 (49%), Gaps = 28/263 (10%)
Query: 144 IFSMTWTPEGRRLAH---DCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHK 200
++S+ + +G LA D VR LW ++S YI FQGH
Sbjct: 993 VYSVAFNLDGSMLATGSGDQTVR--------LWDISSSQCFYI------------FQGHT 1032
Query: 201 ESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSG 260
+R + FS + A+ SDD TVR+WD L+GH + V+ V + P +++ SG
Sbjct: 1033 SCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASG 1092
Query: 261 SKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSS 320
D Q V+LWD +G L TL + S V L ++ NG L S D +++++DI +
Sbjct: 1093 GDD--QIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISS-KK 1149
Query: 321 EVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMA 380
+ T +GH +AVA+ P L +SG D ++ W + + K + I Q H + + ++
Sbjct: 1150 CLYTLQGHTNWVNAVAFSPDGATL-ASGSGDQTVRLWDISSSKCLY-ILQGHTSWVNSVV 1207
Query: 381 WHPLGHILATGSNDHASKFWTRN 403
++P G LA+GS+D + W N
Sbjct: 1208 FNPDGSTLASGSSDQTVRLWEIN 1230
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 120/241 (49%), Gaps = 6/241 (2%)
Query: 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFSPSDSKFATCS 219
+V + +S +G T D G +++W++ + T +GH + + FS A+ S
Sbjct: 866 SVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGS 925
Query: 220 DDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQAL 279
DD TVR+WD K +GH + V+ V + P ++ SGS D Q V+LWD +G+ L
Sbjct: 926 DDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSD--QTVRLWDISSGECL 983
Query: 280 ATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHP 339
H V +A+N +G+ L T S D ++++DI + S F+GH +V +
Sbjct: 984 YIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISS-SQCFYIFQGHTSCVRSVVFSS 1042
Query: 340 QHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKF 399
+ +SG D ++ W + + + + Q H + + ++ + P G +LA+G +D +
Sbjct: 1043 DG-AMLASGSDDQTVRLWDISSGNCLYTL-QGHTSCVRSVVFSPDGAMLASGGDDQIVRL 1100
Query: 400 W 400
W
Sbjct: 1101 W 1101
Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 123/244 (50%), Gaps = 6/244 (2%)
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNN-VKTFQGHKESIRGISFSPSDSKFA 216
H V +V++ +G + + ++ W+ N + + TFQGH + + F+P S A
Sbjct: 1199 HTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLA 1258
Query: 217 TCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG 276
+ S D TVR+WD +GH V V ++P S++ SGS D Q V+LW+ +
Sbjct: 1259 SGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGD--QTVRLWEISSS 1316
Query: 277 QALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVA 336
+ L T H S V + ++ +G L + S D ++++ I + + TF GH +V
Sbjct: 1317 KCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISS-GECLYTFLGHTNWVGSVI 1375
Query: 337 WHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHA 396
+ P + +SG D ++ W + + K + + Q H+N + ++ + P G +LA+GS+D
Sbjct: 1376 FSPDG-AILASGSGDQTVRLWSISSGKCLYTL-QGHNNWVGSIVFSPDGTLLASGSDDQT 1433
Query: 397 SKFW 400
+ W
Sbjct: 1434 VRLW 1437
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 123/246 (50%), Gaps = 10/246 (4%)
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQ-SNMNNVKTFQGHKESIRGISFSPSDSKFA 216
H V +V++ +G + + ++ W S+ + TFQGH + ++F+P S A
Sbjct: 1241 HTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLA 1300
Query: 217 TCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG 276
+ S D TVR+W+ +GH + V V + P +++ SGS D Q V+LW +G
Sbjct: 1301 SGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDD--QTVRLWSISSG 1358
Query: 277 QALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVA 336
+ L T H + V + ++ +G L + S D ++++ I + + T +GH ++
Sbjct: 1359 ECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISS-GKCLYTLQGHNNWVGSIV 1417
Query: 337 WHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNI--IWTMAWHPLGHILATGSND 394
+ P L +SG D ++ W++ + + C+ H +I + ++A+ G ILA+GS+D
Sbjct: 1418 FSPDGT-LLASGSDDQTVRLWNISSGE---CLYTLHGHINSVRSVAFSSDGLILASGSDD 1473
Query: 395 HASKFW 400
K W
Sbjct: 1474 ETIKLW 1479
Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 26/189 (13%)
Query: 144 IFSMTWTPEGRRLAH---DCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHK 200
+ S+T++P+G LA D VR LW ++S Y TF GH
Sbjct: 1329 VSSVTFSPDGTMLASGSDDQTVR--------LWSISSGECLY------------TFLGHT 1368
Query: 201 ESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSG 260
+ + FSP + A+ S D TVR+W L+GH V + + P +L+ SG
Sbjct: 1369 NWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASG 1428
Query: 261 SKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSS 320
S D Q V+LW+ +G+ L TLH H ++V +A++ +G L + S D +K++D++
Sbjct: 1429 SDD--QTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKT-GE 1485
Query: 321 EVQTFRGHK 329
++T + K
Sbjct: 1486 CIKTLKSEK 1494
>sp|Q9D7H2|WDR5B_MOUSE WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1
Length = 328
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 134/293 (45%), Gaps = 50/293 (17%)
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVK-TFQGHKESIRGISFSPSDSKFA 216
H A+ + +S NG W+ +S I W + N K T GH I +++S S+
Sbjct: 38 HSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLV 97
Query: 217 TCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG 276
+ SDD T++VWD K L+GH V C D++P +LIVSGS D + VK+W+ K G
Sbjct: 98 SASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFD--ESVKIWEVKTG 155
Query: 277 QALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD------IRNLSSE--------- 321
+ L TL AH + + +N NG+ +V+ S D L +++D +R L+ E
Sbjct: 156 KCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVK 215
Query: 322 ---------------------------VQTFRGHKKEASAV--AWHPQHEGLFSSGGADG 352
++T+ GHK E + ++ SG D
Sbjct: 216 FSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDN 275
Query: 353 SIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGS--NDHASKFWTRN 403
+ W++ KE+ Q H +++ + A HP +I+A+ + ND K W+ +
Sbjct: 276 MVYIWNLQT-KEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWSSD 327
Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 107/233 (45%), Gaps = 5/233 (2%)
Query: 195 TFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYK 254
T GH +I + FSP+ A+ + D + +W Y +K L GH ++ V W
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDS 93
Query: 255 SLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD 314
S +VS S D + +K+WD ++G+ L TL H V +N N +V+ S D +K+++
Sbjct: 94 SRLVSASDD--KTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWE 151
Query: 315 IRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDN 374
++ ++T H SAV ++ + L SG DG W + + + + +
Sbjct: 152 VKT-GKCLKTLSAHSDPISAVNFNC-NGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNP 209
Query: 375 IIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYN 427
+ + + P G + T + D+ K W +R G ++ K +C+ ++
Sbjct: 210 PVSFVKFSPNGKYILTATLDNTLKLWDYSR-GRCLKTYTGHKNEKYCLFASFS 261
>sp|C4Q0P6|LIS1_SCHMA Lissencephaly-1 homolog OS=Schistosoma mansoni GN=Smp_129340 PE=3
SV=1
Length = 417
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 118/247 (47%), Gaps = 22/247 (8%)
Query: 174 MVTSDHQGYIKYWQSNMNNVK-TFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDF--Y 230
V++ IK W + T +GH +S++ ++F PS A+CS D V++WDF Y
Sbjct: 137 FVSASEDASIKVWDYETGEFEHTLKGHTDSVQDVAFDPSGKFLASCSADMQVKLWDFTIY 196
Query: 231 RCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVM 290
+C K L GH +V V + P +VS S+D + +K+W+ G T H +
Sbjct: 197 QCI--KTLTGHDHNVSSVAFLPSGDFLVSASRD--KTIKMWEVSTGYCTKTFIGHTEWIR 252
Query: 291 DLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAW--HPQH------- 341
+ + GN L + S DH ++++ + + +V RGH+ +AW HPQ+
Sbjct: 253 SVRPSPEGNLLASCSNDHTIRIWSVESRECQV-VLRGHEHVVECIAWASHPQNLNSLPSS 311
Query: 342 ---EGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASK 398
L SG D +I FW V + + HDN + + +HP G +L + S+D +
Sbjct: 312 MNSSLLLVSGSRDRTIRFWDVNIGICLFVLI-GHDNWVRQLVFHPHGRLLLSASDDKTIR 370
Query: 399 FW-TRNR 404
W +NR
Sbjct: 371 VWDLKNR 377
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 112/223 (50%), Gaps = 20/223 (8%)
Query: 195 TFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYK 254
T GH+ I + F P + F + S+D +++VWD+ E L+GH V+ V + P
Sbjct: 117 TLTGHRSPITRVLFHPHYNVFVSASEDASIKVWDYETGEFEHTLKGHTDSVQDVAFDPSG 176
Query: 255 SLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD 314
+ S S D Q VKLWD Q + TL H V +A+ +G++LV+ASRD +K+++
Sbjct: 177 KFLASCSADMQ--VKLWDFTIYQCIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTIKMWE 234
Query: 315 IRNLSSEVQTFRGHKKEASAVAWHPQHEG-LFSSGGADGSIMFWHVGADKEVGCIPQAHD 373
+ + +TF GH + +V P EG L +S D +I W V + +E + + H+
Sbjct: 235 V-STGYCTKTFIGHTEWIRSV--RPSPEGNLLASCSNDHTIRIWSVES-RECQVVLRGHE 290
Query: 374 NIIWTMAW--HPL-----------GHILATGSNDHASKFWTRN 403
+++ +AW HP +L +GS D +FW N
Sbjct: 291 HVVECIAWASHPQNLNSLPSSMNSSLLLVSGSRDRTIRFWDVN 333
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 131 RFVKAATNKMRCPIFSMTWTPEGRRLA-HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQ-S 188
+F+ + + M+ ++ T + L HD V + + +G ++V++ IK W+ S
Sbjct: 177 KFLASCSADMQVKLWDFTIYQCIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTIKMWEVS 236
Query: 189 NMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCV 248
KTF GH E IR + SP + A+CS+D T+R+W + VLRGH V+C+
Sbjct: 237 TGYCTKTFIGHTEWIRSVRPSPEGNLLASCSNDHTIRIWSVESRECQVVLRGHEHVVECI 296
Query: 249 DW--HPY-----------KSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWN 295
W HP L+VSGS+D + ++ WD G L L H + V L ++
Sbjct: 297 AWASHPQNLNSLPSSMNSSLLLVSGSRD--RTIRFWDVNIGICLFVLIGHDNWVRQLVFH 354
Query: 296 QNGNWLVTASRDHLLKVFDIRN 317
+G L++AS D ++V+D++N
Sbjct: 355 PHGRLLLSASDDKTIRVWDLKN 376
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 170 NGLWMVTSDHQGYIKYWQSNMN-NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWD 228
+ L +V+ I++W N+ + GH +R + F P + SDD T+RVWD
Sbjct: 314 SSLLLVSGSRDRTIRFWDVNIGICLFVLIGHDNWVRQLVFHPHGRLLLSASDDKTIRVWD 373
Query: 229 FYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPK 274
K L H V +D + ++GS D Q + +WD +
Sbjct: 374 LKNRRCHKTLNAHSHFVTSLDVNRLAPYAITGSVD--QTIHIWDCR 417
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 6/214 (2%)
Query: 156 LAHDCAVRHMVW-SHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFSPSDS 213
+AH C+V +V +G + T + W N N + + GH + + F+ S+
Sbjct: 17 VAHGCSVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVRFNNSEE 76
Query: 214 KFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDP 273
S G++R+WD + L GH A+V +D+HPY + SGS D +KLWD
Sbjct: 77 LIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTN--IKLWDV 134
Query: 274 KAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEAS 333
+ + H V L ++ +G WL +AS DH +K++D+ + HK +
Sbjct: 135 RRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDL-TAGKMMAELSEHKGPVN 193
Query: 334 AVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGC 367
+ +HP +E L +SG AD ++ FW + + VGC
Sbjct: 194 IIEFHP-NEYLLASGSADRTVRFWDLEKFQLVGC 226
Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 6/210 (2%)
Query: 192 NVKTFQGHKESIRGISFSPSDSKF-ATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDW 250
++ H S+ + S + AT DD V +W + L GH V+ V +
Sbjct: 12 KLQEIVAHGCSVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVRF 71
Query: 251 HPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLL 310
+ + LIV+GS+ +++WD +A + L TL HK+ V L ++ G ++ + S D +
Sbjct: 72 NNSEELIVAGSQSGS--LRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNI 129
Query: 311 KVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ 370
K++D+R V ++GH + + + P + L +S D S+ W + A K + + +
Sbjct: 130 KLWDVRRKGC-VFRYKGHTQAVRCLRFSPDGKWL-ASASDDHSVKLWDLTAGKMMAELSE 187
Query: 371 AHDNIIWTMAWHPLGHILATGSNDHASKFW 400
H + + +HP ++LA+GS D +FW
Sbjct: 188 -HKGPVNIIEFHPNEYLLASGSADRTVRFW 216
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 14/158 (8%)
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKT-FQGHKESIRGISFSPSDSKFA 216
H AVR + +S +G W+ ++ +K W + HK + I F P++ A
Sbjct: 146 HTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLA 205
Query: 217 TCSDDGTVRVWDFYR-----CTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLW 271
+ S D TVR WD + CTE G V+ + + I G KD+ + V W
Sbjct: 206 SGSADRTVRFWDLEKFQLVGCTE-----GETIPVRAILFSNDGGCIFCGGKDSLR-VYGW 259
Query: 272 DPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHL 309
+P Q T+ V DLA N V++++ ++
Sbjct: 260 EP--DQCFDTVPVGWGKVSDLAICNNQLIGVSSAQSNI 295
Score = 42.7 bits (99), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 10/141 (7%)
Query: 274 KAGQALATLHAHKSTVMDLAWNQNGNWLVTA----SRDHLLKVFDIRNLSSEVQTFRGHK 329
K L + AH +V + ++ LV R HL V N + + + GH
Sbjct: 8 KTTWKLQEIVAHGCSVSSVVLGRSSGRLVATGGDDCRVHLWSV----NKPNCIMSLTGHT 63
Query: 330 KEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILA 389
+V ++ E L +G GS+ W + A K + + H + ++ +HP G +A
Sbjct: 64 TPVESVRFNNSEE-LIVAGSQSGSLRIWDLEAAKILRTL-MGHKANVSSLDFHPYGEFVA 121
Query: 390 TGSNDHASKFWTRNRLGDPMR 410
+GS D K W R G R
Sbjct: 122 SGSLDTNIKLWDVRRKGCVFR 142
>sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus
purpuratus GN=KATNB1 PE=1 SV=1
Length = 690
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 115/241 (47%), Gaps = 9/241 (3%)
Query: 170 NGLWMVTSDHQGYIKYWQS-NMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWD 228
+G MVT + W N + + GH + + F+ S+ S GT++++D
Sbjct: 28 SGRVMVTGGEDKKVNLWAVGKQNCIISLSGHTSPVDSVKFNSSEELVVAGSQSGTMKIYD 87
Query: 229 FYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKST 288
+ L GH ++C+D+HP+ + SGS D VKLWD + + T H
Sbjct: 88 LEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTN--VKLWDVRRKGCIYTYKGHSDQ 145
Query: 289 VMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSG 348
V + ++ +G WLVTAS D +K++D+ + Q F+ H + + +HP +E L +SG
Sbjct: 146 VNMIKFSPDGKWLVTASEDTTIKLWDL-TMGKLFQEFKNHTGGVTGIEFHP-NEFLLASG 203
Query: 349 GADGSIMFWHVGADKEVGCI-PQAHDNIIWTMAWHPLGHILATGSNDHASKF-WTRNRLG 406
+D ++ FW + + V P A + + ++++HP G L S D F W R
Sbjct: 204 SSDRTVQFWDLETFQLVSSTSPGA--SAVRSISFHPDGSYLFCSSQDMLHAFGWEPIRCF 261
Query: 407 D 407
D
Sbjct: 262 D 262
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NVKTFQGHKESIRGISFSPSDSKFA 216
H ++R M + G ++ + +K W + T++GH + + I FSP
Sbjct: 100 HRNSIRCMDFHPFGEFVASGSTDTNVKLWDVRRKGCIYTYKGHSDQVNMIKFSPDGKWLV 159
Query: 217 TCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG 276
T S+D T+++WD + + H V +++HP + L+ SGS D + V+ WD +
Sbjct: 160 TASEDTTIKLWDLTMGKLFQEFKNHTGGVTGIEFHPNEFLLASGSSD--RTVQFWDLETF 217
Query: 277 QALATLHAHKSTVMDLAWNQNGNWLVTASRDHL 309
Q +++ S V ++++ +G++L +S+D L
Sbjct: 218 QLVSSTSPGASAVRSISFHPDGSYLFCSSQDML 250
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 103/212 (48%), Gaps = 12/212 (5%)
Query: 193 VKTFQGHKESIRGISFSPSDSK-FATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWH 251
++ H ++ ++ P + T +D V +W + L GH + V V ++
Sbjct: 9 LQELVAHSSNVNCLALGPMSGRVMVTGGEDKKVNLWAVGKQNCIISLSGHTSPVDSVKFN 68
Query: 252 PYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLK 311
+ L+V+GS+ +K++D + + + TL H++++ + ++ G ++ + S D +K
Sbjct: 69 SSEELVVAGSQSGT--MKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVK 126
Query: 312 VFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQA 371
++D+R + T++GH + + + + P + L + D +I W D +G + Q
Sbjct: 127 LWDVRRKGC-IYTYKGHSDQVNMIKFSPDGKWLVT-ASEDTTIKLW----DLTMGKLFQE 180
Query: 372 HDNI---IWTMAWHPLGHILATGSNDHASKFW 400
N + + +HP +LA+GS+D +FW
Sbjct: 181 FKNHTGGVTGIEFHPNEFLLASGSSDRTVQFW 212
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 279 LATLHAHKSTVMDLAWN-QNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAW 337
L L AH S V LA +G +VT D + ++ + + + + GH +V +
Sbjct: 9 LQELVAHSSNVNCLALGPMSGRVMVTGGEDKKVNLWAVGKQNC-IISLSGHTSPVDSVKF 67
Query: 338 HPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHAS 397
+ E L +G G++ + + K V + H N I M +HP G +A+GS D
Sbjct: 68 NSSEE-LVVAGSQSGTMKIYDLEPAKIVRTL-TGHRNSIRCMDFHPFGEFVASGSTDTNV 125
Query: 398 KFWTRNRLG 406
K W R G
Sbjct: 126 KLWDVRRKG 134
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 131/288 (45%), Gaps = 13/288 (4%)
Query: 140 MRCPIFSMTWTPEGRRLAHDCAVRHMVW-SHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQ 197
M P+ + T +AH V +V +G + T + W N N + +
Sbjct: 1 MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT 60
Query: 198 GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLI 257
GH + + + + S G++RVWD + L GH A++ +D+HPY +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 258 VSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIR- 316
SGS+D +KLWD + + H V L ++ +G WL +A+ DH +K++D+
Sbjct: 121 ASGSQDTN--IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 317 -NLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNI 375
+ SE F GH + V +HP +E L +SG +D +I FW + + V CI +
Sbjct: 179 GKMMSE---FPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKFQVVSCI-EGEPGP 233
Query: 376 IWTMAWHPLGHILATGSNDHASKF-WTRNRLGDPMRDRYNQKG-LAHC 421
+ ++ ++P G L +G D + W R D + + + LA C
Sbjct: 234 VRSVLFNPDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAIC 281
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 131/288 (45%), Gaps = 13/288 (4%)
Query: 140 MRCPIFSMTWTPEGRRLAHDCAVRHMVW-SHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQ 197
M P+ + T +AH V +V +G + T + W N N + +
Sbjct: 1 MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT 60
Query: 198 GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLI 257
GH + + + + S G++RVWD + L GH A++ +D+HPY +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 258 VSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIR- 316
SGS+D +KLWD + + H V L ++ +G WL +A+ DH +K++D+
Sbjct: 121 ASGSQDTN--IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 317 -NLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNI 375
+ SE F GH + V +HP +E L +SG +D +I FW + + V CI +
Sbjct: 179 GKMMSE---FPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKFQVVSCI-EGEPGP 233
Query: 376 IWTMAWHPLGHILATGSNDHASKF-WTRNRLGDPMRDRYNQKG-LAHC 421
+ ++ ++P G L +G D + W R D + + + LA C
Sbjct: 234 VRSVLFNPDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAIC 281
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 6/217 (2%)
Query: 156 LAHDCAVRHMVW-SHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFSPSDS 213
+AH V +V G + T + W N N V + GH I + S +
Sbjct: 17 VAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEE 76
Query: 214 KFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDP 273
S G++RVWD + L GH A++ +D+HPY S + SGS D +KLWD
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTD--IKLWDV 134
Query: 274 KAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEAS 333
+ + +H V L ++ +G WL +A+ DH +K++D+ + F GH +
Sbjct: 135 RRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDL-TAGKVMFEFTGHSGPVN 193
Query: 334 AVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ 370
V +HP E L +SG +D +I FW + V CI +
Sbjct: 194 VVEFHPS-EYLLASGSSDRTIRFWDLEKFHVVSCIEE 229
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 2/141 (1%)
Query: 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVK-TFQGHKESIRGISFSPSDSKF 215
+H AVR + +S +G W+ ++ +K W V F GH + + F PS+
Sbjct: 145 SHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLL 204
Query: 216 ATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKA 275
A+ S D T+R WD + + V+C+ ++P + G +D+ + V W+P+
Sbjct: 205 ASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLR-VYGWEPER 263
Query: 276 GQALATLHAHKSTVMDLAWNQ 296
+ ++ K + + NQ
Sbjct: 264 CFDVVVVNWGKVADLSVCHNQ 284
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 274 KAGQALATLHAHKSTVMDLAW-NQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEA 332
K L + AH S V L G L T D + V+ + N + V + GH
Sbjct: 8 KTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSV-NKPNCVMSLTGHTTPI 66
Query: 333 SAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGS 392
++ + E L +G GSI W + A K + + H I ++ +HP G +A+GS
Sbjct: 67 ESLQISAKEE-LIVAGSQSGSIRVWDLEAAKILRTL-LGHKANICSLDFHPYGSFVASGS 124
Query: 393 NDHASKFWTRNRLGDPMRDRYNQKGL 418
D K W R G + + + + +
Sbjct: 125 LDTDIKLWDVRRKGCIFKYKSHTQAV 150
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 138/305 (45%), Gaps = 54/305 (17%)
Query: 143 PIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNV-KTFQGHKE 201
P +++ +T G H AV + +S NG W+ +S IK W + KT GHK
Sbjct: 60 PNYTLKFTLAG----HTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 115
Query: 202 SIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGS 261
I +++S + SDD T++VW+ K L+GH V C +++P +LIVSGS
Sbjct: 116 GISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGS 175
Query: 262 KDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD------I 315
D + V++WD + G+ L TL AH V + +N++G+ +V++S D L +++D +
Sbjct: 176 FD--ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 233
Query: 316 RNLSSE------------------------------------VQTFRGHKKEASAVAWHP 339
+ L + ++T+ GHK E + +
Sbjct: 234 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 293
Query: 340 QHEG--LFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGS--NDH 395
G SG D + W++ + KEV Q H + + A HP +I+A+ + ND
Sbjct: 294 SVTGGKWIVSGSEDNMVYIWNLQS-KEVVQKLQGHTDTVLCTACHPTENIIASAALENDK 352
Query: 396 ASKFW 400
K W
Sbjct: 353 TIKLW 357
>sp|Q2KIG2|WDR5_BOVIN WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1
Length = 334
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 140/305 (45%), Gaps = 54/305 (17%)
Query: 143 PIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNV-KTFQGHKE 201
P +++ +T G H AV + +S NG W+ +S IK W + KT GHK
Sbjct: 33 PNYALKFTLAG----HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 88
Query: 202 SIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGS 261
I +++S + + SDD T+++WD K L+GH V C +++P +LIVSGS
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 262 KDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD------I 315
D + V++WD K G+ L TL AH V + +N++G+ +V++S D L +++D +
Sbjct: 149 FD--ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 316 RNLSSE------------------------------------VQTFRGHKKEASAVAWHP 339
+ L + ++T+ GHK E + +
Sbjct: 207 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 266
Query: 340 QHEG--LFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGS--NDH 395
G SG D + W++ KE+ Q H +++ + A HP +I+A+ + ND
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNLQT-KEIVQKLQGHTDVVISTACHPTENIIASAALENDK 325
Query: 396 ASKFW 400
K W
Sbjct: 326 TIKLW 330
>sp|Q498M4|WDR5_RAT WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2
SV=1
Length = 334
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 140/305 (45%), Gaps = 54/305 (17%)
Query: 143 PIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNV-KTFQGHKE 201
P +++ +T G H AV + +S NG W+ +S IK W + KT GHK
Sbjct: 33 PNYALKFTLAG----HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 88
Query: 202 SIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGS 261
I +++S + + SDD T+++WD K L+GH V C +++P +LIVSGS
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 262 KDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD------I 315
D + V++WD K G+ L TL AH V + +N++G+ +V++S D L +++D +
Sbjct: 149 FD--ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 316 RNLSSE------------------------------------VQTFRGHKKEASAVAWHP 339
+ L + ++T+ GHK E + +
Sbjct: 207 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 266
Query: 340 QHEG--LFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGS--NDH 395
G SG D + W++ KE+ Q H +++ + A HP +I+A+ + ND
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNLQT-KEIVQKLQGHTDVVISTACHPTENIIASAALENDK 325
Query: 396 ASKFW 400
K W
Sbjct: 326 TIKLW 330
>sp|P61965|WDR5_MOUSE WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=1 SV=1
Length = 334
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 140/305 (45%), Gaps = 54/305 (17%)
Query: 143 PIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNV-KTFQGHKE 201
P +++ +T G H AV + +S NG W+ +S IK W + KT GHK
Sbjct: 33 PNYALKFTLAG----HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 88
Query: 202 SIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGS 261
I +++S + + SDD T+++WD K L+GH V C +++P +LIVSGS
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 262 KDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD------I 315
D + V++WD K G+ L TL AH V + +N++G+ +V++S D L +++D +
Sbjct: 149 FD--ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 316 RNLSSE------------------------------------VQTFRGHKKEASAVAWHP 339
+ L + ++T+ GHK E + +
Sbjct: 207 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 266
Query: 340 QHEG--LFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGS--NDH 395
G SG D + W++ KE+ Q H +++ + A HP +I+A+ + ND
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNLQT-KEIVQKLQGHTDVVISTACHPTENIIASAALENDK 325
Query: 396 ASKFW 400
K W
Sbjct: 326 TIKLW 330
>sp|P61964|WDR5_HUMAN WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1
Length = 334
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 140/305 (45%), Gaps = 54/305 (17%)
Query: 143 PIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNV-KTFQGHKE 201
P +++ +T G H AV + +S NG W+ +S IK W + KT GHK
Sbjct: 33 PNYALKFTLAG----HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 88
Query: 202 SIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGS 261
I +++S + + SDD T+++WD K L+GH V C +++P +LIVSGS
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 262 KDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD------I 315
D + V++WD K G+ L TL AH V + +N++G+ +V++S D L +++D +
Sbjct: 149 FD--ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 316 RNLSSE------------------------------------VQTFRGHKKEASAVAWHP 339
+ L + ++T+ GHK E + +
Sbjct: 207 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 266
Query: 340 QHEG--LFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGS--NDH 395
G SG D + W++ KE+ Q H +++ + A HP +I+A+ + ND
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNLQT-KEIVQKLQGHTDVVISTACHPTENIIASAALENDK 325
Query: 396 ASKFW 400
K W
Sbjct: 326 TIKLW 330
>sp|Q3Y8L7|WDR69_CHLRE Outer row dynein assembly protein 16 OS=Chlamydomonas reinhardtii
GN=ODA16 PE=1 SV=1
Length = 446
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 125/247 (50%), Gaps = 9/247 (3%)
Query: 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFS-PSDSK 214
AH + + ++ +G +T + K W + V T +GHK + I+F+ P K
Sbjct: 92 AHILPLTNCAFNKSGDRFITGSYDRTCKVWNTFTGEEVFTLEGHKNVVYAIAFNNPYGDK 151
Query: 215 FATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPK 274
T S D T ++WD Y L+GH ++ C+ ++P ++I +GS DN KLWD +
Sbjct: 152 IVTGSFDKTCKLWDAYTGQLYYTLKGHQTEIVCLSFNPQSTIIATGSMDN--TAKLWDVE 209
Query: 275 AGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASA 334
GQ ATL H++ ++ L +N G+ +VT S DH +++D+R V GH+ E S+
Sbjct: 210 TGQERATLAGHRAEIVSLGFNTGGDLIVTGSFDHDSRLWDVRT-GQCVHVLSGHRGEVSS 268
Query: 335 VAWHPQHEG-LFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSN 393
++ + G L SG D + W V + + + + Q H + + +A+ G + + S
Sbjct: 269 TQFN--YAGTLVVSGSIDCTSRLWDVRSGRCLS-VKQGHTDEVLDVAFDAAGTKMVSASA 325
Query: 394 DHASKFW 400
D +++ +
Sbjct: 326 DGSARLY 332
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 109/232 (46%), Gaps = 14/232 (6%)
Query: 174 MVTSDHQGYIKYWQSNMNNVK-TFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRC 232
+VT K W + + T +GH+ I +SF+P + AT S D T ++WD
Sbjct: 152 IVTGSFDKTCKLWDAYTGQLYYTLKGHQTEIVCLSFNPQSTIIATGSMDNTAKLWDVETG 211
Query: 233 TEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDL 292
E L GH A++ + ++ LIV+GS D+ +LWD + GQ + L H+ V
Sbjct: 212 QERATLAGHRAEIVSLGFNTGGDLIVTGSFDHDS--RLWDVRTGQCVHVLSGHRGEVSST 269
Query: 293 AWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADG 352
+N G +V+ S D +++D+R+ + +GH E VA+ + S+ ADG
Sbjct: 270 QFNYAGTLVVSGSIDCTSRLWDVRS-GRCLSVKQGHTDEVLDVAFDAAGTKMVSA-SADG 327
Query: 353 SIMFWH----VGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFW 400
S +H V VG H+ I +A++P G L T S+D + W
Sbjct: 328 SARLYHTLTGVCQHTLVG-----HEGEISKVAFNPQGTRLITASSDKTCRLW 374
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 7/207 (3%)
Query: 195 TFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYK 254
T GH+ I + F+ T S D R+WD VL GH +V ++
Sbjct: 216 TLAGHRAEIVSLGFNTGGDLIVTGSFDHDSRLWDVRTGQCVHVLSGHRGEVSSTQFNYAG 275
Query: 255 SLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD 314
+L+VSGS D +LWD ++G+ L+ H V+D+A++ G +V+AS D +++
Sbjct: 276 TLVVSGSIDCTS--RLWDVRSGRCLSVKQGHTDEVLDVAFDAAGTKMVSASADGSARLY- 332
Query: 315 IRNLSSEVQ-TFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHD 373
L+ Q T GH+ E S VA++PQ L ++ +D + W + + + + H
Sbjct: 333 -HTLTGVCQHTLVGHEGEISKVAFNPQGTRLITAS-SDKTCRLWDCDTGECLQ-VLEGHT 389
Query: 374 NIIWTMAWHPLGHILATGSNDHASKFW 400
+ I++ A++ G + TGS D+ + W
Sbjct: 390 DEIFSCAFNYEGDFIITGSKDNTCRIW 416
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
Query: 197 QGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSL 256
QGH + + ++F + +K + S DG+ R++ + L GH ++ V ++P +
Sbjct: 302 QGHTDEVLDVAFDAAGTKMVSASADGSARLYHTLTGVCQHTLVGHEGEISKVAFNPQGTR 361
Query: 257 IVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIR 316
+++ S D + +LWD G+ L L H + A+N G++++T S+D+ +++
Sbjct: 362 LITASSD--KTCRLWDCDTGECLQVLEGHTDEIFSCAFNYEGDFIITGSKDNTCRIWKAL 419
Query: 317 NLSSE 321
SS+
Sbjct: 420 TASSQ 424
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVK-TFQGHKESIRGISFSPSDSKFA 216
H V + + G MV++ G + + + + T GH+ I ++F+P ++
Sbjct: 304 HTDEVLDVAFDAAGTKMVSASADGSARLYHTLTGVCQHTLVGHEGEISKVAFNPQGTRLI 363
Query: 217 TCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLW 271
T S D T R+WD +VL GH ++ ++ I++GSKDN ++W
Sbjct: 364 TASSDKTCRLWDCDTGECLQVLEGHTDEIFSCAFNYEGDFIITGSKDN--TCRIW 416
>sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae
GN=BRAFLDRAFT_59218 PE=3 SV=1
Length = 406
Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 110/247 (44%), Gaps = 26/247 (10%)
Query: 174 MVTSDHQGYIKYWQSNMNNV-KTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRC 232
MV++ IK W + +T +GH ++++ +SF A+CS D T+++WDF
Sbjct: 121 MVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQGKLLASCSADMTIKLWDFQTF 180
Query: 233 TEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDL 292
K + GH +V V + P ++S S+D + +K+W+ G + T H+ V +
Sbjct: 181 ENIKTMHGHDHNVSSVHFMPNGDFLISASRD--KTIKMWELATGYCVKTFTGHREWVRTV 238
Query: 293 AWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEG--------- 343
NQ+G+ L + S D ++V+ + N + + R H+ +AW P+
Sbjct: 239 RVNQDGSLLASCSNDQTVRVWVVANKECKAE-LREHEHVVECIAWAPESCNGHVSEVMGA 297
Query: 344 --------LFSSGGADGSIMFWHVGADKEVGCIPQA--HDNIIWTMAWHPLGHILATGSN 393
SG D +I W + CI HDN + + WHP G + + S+
Sbjct: 298 EKKGRSGPFLLSGSRDKTIKMWDISTG---VCIMTLVGHDNWVRGVVWHPGGKYIISASD 354
Query: 394 DHASKFW 400
D + W
Sbjct: 355 DKTIRVW 361
Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 23/224 (10%)
Query: 195 TFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYK 254
+ GH+ I + F P S + S+D T+++WD+ E+ L+GH V+ V +
Sbjct: 101 SLSGHRSPITRVLFHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQG 160
Query: 255 SLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD 314
L+ S S D +KLWD + + + T+H H V + + NG++L++ASRD +K+++
Sbjct: 161 KLLASCSAD--MTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGDFLISASRDKTIKMWE 218
Query: 315 IRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDN 374
+ V+TF GH++ V + Q L +S D ++ W V A+KE + H++
Sbjct: 219 LAT-GYCVKTFTGHREWVRTVRVN-QDGSLLASCSNDQTVRVW-VVANKECKAELREHEH 275
Query: 375 IIWTMAWHPL---GHI---------------LATGSNDHASKFW 400
++ +AW P GH+ L +GS D K W
Sbjct: 276 VVECIAWAPESCNGHVSEVMGAEKKGRSGPFLLSGSRDKTIKMW 319
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 170 NGLWMVTSDHQGYIKYWQ-SNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWD 228
NG +++++ IK W+ + VKTF GH+E +R + + S A+CS+D TVRVW
Sbjct: 201 NGDFLISASRDKTIKMWELATGYCVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVWV 260
Query: 229 FYRCTEEKVLRGHGADVKCVDWHPYKS------------------LIVSGSKDNQQPVKL 270
+ LR H V+C+ W P ++SGS+D + +K+
Sbjct: 261 VANKECKAELREHEHVVECIAWAPESCNGHVSEVMGAEKKGRSGPFLLSGSRD--KTIKM 318
Query: 271 WDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKK 330
WD G + TL H + V + W+ G ++++AS D ++V+D +N + +T H+
Sbjct: 319 WDISTGVCIMTLVGHDNWVRGVVWHPGGKYIISASDDKTIRVWDYKNKRCQ-KTLEAHQH 377
Query: 331 EASAVAWHPQHEGLFSSGGADGSIMFW 357
+++ +H + +G D ++ W
Sbjct: 378 FCTSIDFHRSAPYVI-TGSVDQTVKVW 403
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 219 SDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQA 278
S D T+++WD L GH V+ V WHP I+S S D + +++WD K +
Sbjct: 311 SRDKTIKMWDISTGVCIMTLVGHDNWVRGVVWHPGGKYIISASDD--KTIRVWDYKNKRC 368
Query: 279 LATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIR 316
TL AH+ + ++++ +++T S D +KV++ R
Sbjct: 369 QKTLEAHQHFCTSIDFHRSAPYVITGSVDQTVKVWECR 406
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 183 IKYWQ-SNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGH 241
IK W S + T GH +RG+ + P + SDD T+RVWD+ +K L H
Sbjct: 316 IKMWDISTGVCIMTLVGHDNWVRGVVWHPGGKYIISASDDKTIRVWDYKNKRCQKTLEAH 375
Query: 242 GADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPK 274
+D+H +++GS D Q VK+W+ +
Sbjct: 376 QHFCTSIDFHRSAPYVITGSVD--QTVKVWECR 406
Score = 36.6 bits (83), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 156 LAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQ-SNMNNVKTFQGHKESIRGISFSPSDSK 214
+ HD VR +VW G +++++ I+ W N KT + H+ I F S
Sbjct: 331 VGHDNWVRGVVWHPGGKYIISASDDKTIRVWDYKNKRCQKTLEAHQHFCTSIDFHRSAPY 390
Query: 215 FATCSDDGTVRVWD 228
T S D TV+VW+
Sbjct: 391 VITGSVDQTVKVWE 404
>sp|Q5M786|WDR5_XENTR WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2
SV=1
Length = 334
Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 139/305 (45%), Gaps = 54/305 (17%)
Query: 143 PIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNV-KTFQGHKE 201
P +++ +T G H AV + +S NG W+ +S IK W + KT GHK
Sbjct: 33 PNYTLKFTLAG----HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 88
Query: 202 SIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGS 261
I +++S + + SDD T+++WD K L+GH V C +++P +LIVSGS
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 262 KDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD------I 315
D + V++WD K G+ L TL AH V + +N++G+ +V++S D L +++D +
Sbjct: 149 FD--ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 316 RNLSSE------------------------------------VQTFRGHKKEASAVAWHP 339
+ L + ++T+ HK E + +
Sbjct: 207 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANF 266
Query: 340 QHEG--LFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGS--NDH 395
G SG D + W++ KEV Q H +++ + A HP +I+A+ + ND
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNLQT-KEVVQKLQGHTDVVISTACHPTENIIASAALENDK 325
Query: 396 ASKFW 400
K W
Sbjct: 326 TIKLW 330
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 16/259 (6%)
Query: 146 SMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNN-VKTFQGHKESIR 204
+ T T EG H +V + +S +G + + IK W + +T +GH S+
Sbjct: 832 ACTQTLEG----HGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVW 887
Query: 205 GISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDN 264
++FSP + A+ SDD T+++WD T + L GHG V+ V + P + SGS D+
Sbjct: 888 SVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDH 947
Query: 265 QQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQT 324
+K+WD +G TL H S+V+ +A++ +G + + S D +K++D + + QT
Sbjct: 948 --TIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTAS-GTCTQT 1004
Query: 325 FRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQA---HDNIIWTMAW 381
GH +VA+ P + + +SG D +I W D G Q H + ++ +
Sbjct: 1005 LEGHGGSVWSVAFSPDGQRV-ASGSDDKTIKIW----DTASGTCTQTLEGHGGWVQSVVF 1059
Query: 382 HPLGHILATGSNDHASKFW 400
P G +A+GS+DH K W
Sbjct: 1060 SPDGQRVASGSDDHTIKIW 1078
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 12/222 (5%)
Query: 183 IKYWQSNM-NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGH 241
IK W + +T +GH ++ ++FSP + A+ SDD T+++WD T + L GH
Sbjct: 907 IKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGH 966
Query: 242 GADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWL 301
G+ V V + P + SGS D + +K+WD +G TL H +V +A++ +G +
Sbjct: 967 GSSVLSVAFSPDGQRVASGSGD--KTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRV 1024
Query: 302 VTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGA 361
+ S D +K++D + + QT GH +V + P + + +SG D +I W
Sbjct: 1025 ASGSDDKTIKIWDTAS-GTCTQTLEGHGGWVQSVVFSPDGQRV-ASGSDDHTIKIW---- 1078
Query: 362 DKEVGCIPQA---HDNIIWTMAWHPLGHILATGSNDHASKFW 400
D G Q H + +W++A+ P G +A+GS D K W
Sbjct: 1079 DAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIW 1120
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 12/222 (5%)
Query: 183 IKYWQSNM-NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGH 241
IK W + +T +GH ++ + FSP + A+ SDD T+++WD T + L GH
Sbjct: 1033 IKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGH 1092
Query: 242 GADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWL 301
G V V + P + SGS D +K+WD +G TL H V +A++ +G +
Sbjct: 1093 GDSVWSVAFSPDGQRVASGSIDG--TIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRV 1150
Query: 302 VTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGA 361
+ S D +K++D + + QT GH +VA+ P + + +SG +D +I W
Sbjct: 1151 ASGSIDGTIKIWDAAS-GTCTQTLEGHGGWVQSVAFSPDGQRV-ASGSSDKTIKIW---- 1204
Query: 362 DKEVGCIPQA---HDNIIWTMAWHPLGHILATGSNDHASKFW 400
D G Q H + ++A+ P G +A+GS+D+ K W
Sbjct: 1205 DTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIW 1246
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 103/201 (51%), Gaps = 5/201 (2%)
Query: 162 VRHMVWSHNGLWMVTSDHQGYIKYWQS-NMNNVKTFQGHKESIRGISFSPSDSKFATCSD 220
V+ +V+S +G + + IK W + + +T +GH +S+ ++FSP + A+ S
Sbjct: 1054 VQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSI 1113
Query: 221 DGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALA 280
DGT+++WD T + L GHG V V + P + SGS D +K+WD +G
Sbjct: 1114 DGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDG--TIKIWDAASGTCTQ 1171
Query: 281 TLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQ 340
TL H V +A++ +G + + S D +K++D + + QT GH +VA+ P
Sbjct: 1172 TLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTAS-GTCTQTLEGHGGWVQSVAFSPD 1230
Query: 341 HEGLFSSGGADGSIMFWHVGA 361
+ + +SG +D +I W +
Sbjct: 1231 GQRV-ASGSSDNTIKIWDTAS 1250
>sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis
GN=katnb1 PE=2 SV=1
Length = 655
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 6/214 (2%)
Query: 156 LAHDCAVRHMVW-SHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFSPSDS 213
+AH +V +V +G + T + W N N + + GH + + F+ ++
Sbjct: 17 VAHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVESVRFNNAEE 76
Query: 214 KFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDP 273
S G++RVWD + L GH A+V +D+HPY + SGS D +KLWD
Sbjct: 77 LIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTN--IKLWDV 134
Query: 274 KAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEAS 333
+ + H V L ++ +G WL +AS DH +K++D+ + HK +
Sbjct: 135 RRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDL-TAGKMMAELSEHKGPVN 193
Query: 334 AVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGC 367
+ +HP +E L +SG AD ++ FW + + +GC
Sbjct: 194 IIEFHP-NEYLLASGSADRTVRFWDLEKFQLIGC 226
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 6/210 (2%)
Query: 192 NVKTFQGHKESIRGISFSPSDSKF-ATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDW 250
++ H S+ + S + AT DD V +W + L GH V+ V +
Sbjct: 12 KLQEIVAHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVESVRF 71
Query: 251 HPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLL 310
+ + LIV+GS+ +++WD +A + L TL HK+ V L ++ G+++ + S D +
Sbjct: 72 NNAEELIVAGSQSGS--LRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNI 129
Query: 311 KVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ 370
K++D+R V ++GH + + + P + L +S D S+ W + A K + + +
Sbjct: 130 KLWDVRRKGC-VFRYKGHTQAVRCLRFSPDGKWL-ASASDDHSVKLWDLTAGKMMAELSE 187
Query: 371 AHDNIIWTMAWHPLGHILATGSNDHASKFW 400
H + + +HP ++LA+GS D +FW
Sbjct: 188 -HKGPVNIIEFHPNEYLLASGSADRTVRFW 216
Score = 42.0 bits (97), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Query: 274 KAGQALATLHAHKSTVMDLAW-NQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEA 332
K L + AH S+V + +G + T D + ++ + N + + + GH
Sbjct: 8 KTTWKLQEIVAHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSV-NKPNCIMSLTGHTTPV 66
Query: 333 SAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGS 392
+V ++ E L +G GS+ W + A K + + H + ++ +HP G +A+GS
Sbjct: 67 ESVRFNNAEE-LIVAGSQSGSLRVWDLEAAKILRTL-MGHKANVCSLDFHPYGDFVASGS 124
Query: 393 NDHASKFWTRNRLGDPMR 410
D K W R G R
Sbjct: 125 LDTNIKLWDVRRKGCVFR 142
Score = 41.6 bits (96), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 14/142 (9%)
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKT-FQGHKESIRGISFSPSDSKFA 216
H AVR + +S +G W+ ++ +K W + HK + I F P++ A
Sbjct: 146 HTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLA 205
Query: 217 TCSDDGTVRVWDFYR-----CTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLW 271
+ S D TVR WD + CTE G V+ + + I G +D + V W
Sbjct: 206 SGSADRTVRFWDLEKFQLIGCTE-----GETIPVRAILFSSDGGCIFCGGRDALR-VYGW 259
Query: 272 DPKAGQALATLHAHKSTVMDLA 293
+P Q T+ V DLA
Sbjct: 260 EP--DQCFDTVPVGWGKVCDLA 279
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 6/218 (2%)
Query: 186 WQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADV 245
WQ+ + + +GH + I GI+FSP A+ S D +VR+W+ ++L H V
Sbjct: 965 WQTG-KYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWV 1023
Query: 246 KCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTAS 305
V +HP +I +GS D VKLW+ GQ L TL H ++ +AW+ +G L +AS
Sbjct: 1024 YAVVFHPQGKIIATGSADC--TVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASAS 1081
Query: 306 RDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEV 365
D ++++D V RGH + + P E + ++ D ++ W K +
Sbjct: 1082 ADQSVRLWDCCT-GRCVGILRGHSNRVYSAIFSPNGE-IIATCSTDQTVKIWDWQQGKCL 1139
Query: 366 GCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRN 403
+ H N ++ +A+ P G ILA+ S+D + W N
Sbjct: 1140 KTLT-GHTNWVFDIAFSPDGKILASASHDQTVRIWDVN 1176
Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 141/318 (44%), Gaps = 47/318 (14%)
Query: 133 VKAATNKMRCPIFSMT--------WTPEGRRLAH---DCAVRHMVWSHNG--LWMVTSDH 179
V A + + C +F+ T ++PEG+ LA DC VR VW L ++ H
Sbjct: 626 VDFANSDLSCCVFTETLGNILSAAFSPEGQLLATCDTDCHVR--VWEVKSGKLLLICRGH 683
Query: 180 QGYIKY---------------------WQS-NMNNVKTFQGHKESIRGISFSPSDSKFAT 217
++++ W + +KT GH+ + ++F P A+
Sbjct: 684 SNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLAS 743
Query: 218 CSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQ 277
S D T+++WD T + L GH V+CV + P + + S + D+ +KLWD G+
Sbjct: 744 ASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADH--TIKLWDVSQGK 801
Query: 278 ALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAW 337
L TL +H V +A++ +G L + S D +K+++ ++T+ GH ++A+
Sbjct: 802 CLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHT-GECLKTYIGHTNSVYSIAY 860
Query: 338 HPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQA--HDNIIWTMAWHPLGHILATGSNDH 395
P + + SG D +I W CI H N + ++A+ P G LA S D
Sbjct: 861 SPDSK-ILVSGSGDRTIKLWDCQTHI---CIKTLHGHTNEVCSVAFSPDGQTLACVSLDQ 916
Query: 396 ASKFWTRNRLGDPMRDRY 413
+ + W R G ++ Y
Sbjct: 917 SVRLW-NCRTGQCLKAWY 933
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 111/225 (49%), Gaps = 18/225 (8%)
Query: 183 IKYWQSNMN-NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGH 241
IK W + +KT GH + ++FSP A S D +VR+W+ C + L+
Sbjct: 876 IKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWN---CRTGQCLKAW 932
Query: 242 GADVKCVDW------HPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWN 295
+ DW P + ++ SGS D + VKLWD + G+ +++L H + +A++
Sbjct: 933 YGNT---DWALPVAFSPDRQILASGSND--KTVKLWDWQTGKYISSLEGHTDFIYGIAFS 987
Query: 296 QNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIM 355
+ L +AS D +++++I Q H AV +HPQ + + ++G AD ++
Sbjct: 988 PDSQTLASASTDSSVRLWNIST-GQCFQILLEHTDWVYAVVFHPQGK-IIATGSADCTVK 1045
Query: 356 FWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFW 400
W++ + + + + D I+ MAW P G +LA+ S D + + W
Sbjct: 1046 LWNISTGQCLKTLSEHSDKIL-GMAWSPDGQLLASASADQSVRLW 1089
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 71/168 (42%), Gaps = 27/168 (16%)
Query: 144 IFSMTWTPEGRRLAH----------DCA--------------VRHMVWSHNGLWMVTSDH 179
I M W+P+G+ LA DC V ++S NG + T
Sbjct: 1065 ILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCST 1124
Query: 180 QGYIKYWQSNM-NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVL 238
+K W +KT GH + I+FSP A+ S D TVR+WD +
Sbjct: 1125 DQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHIC 1184
Query: 239 RGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHK 286
GH V V + P ++ SGS+D Q V++W+ K G+ L L A +
Sbjct: 1185 IGHTHLVSSVAFSPDGEVVASGSQD--QTVRIWNVKTGECLQILRAKR 1230
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
Query: 165 MVWSHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFSPSDSKFATCSDDGT 223
M WS +G + ++ ++ W V +GH + FSP+ ATCS D T
Sbjct: 1068 MAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQT 1127
Query: 224 VRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLH 283
V++WD+ + K L GH V + + P ++ S S D Q V++WD G+
Sbjct: 1128 VKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHD--QTVRIWDVNTGKCHHICI 1185
Query: 284 AHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRN 317
H V +A++ +G + + S+D +++++++
Sbjct: 1186 GHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKT 1219
>sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2
SV=1
Length = 589
Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 5/187 (2%)
Query: 174 MVTSDHQGYIKYWQS-NMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRC 232
+++ I+YW + N +QGH + + SP FA+ S D T R+W F R
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRT 416
Query: 233 TEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDL 292
++ GH ADV CV +HP + + +GS D + V+LW + G ++ H+ V+ L
Sbjct: 417 YPLRIYAGHLADVDCVKFHPNSNYLATGSTD--KTVRLWSAQQGNSVRLFTGHRGPVLSL 474
Query: 293 AWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADG 352
+++ NG +L +A D LK++D+ + + + RGH +++A+ P GL +S D
Sbjct: 475 SFSPNGKYLASAGEDQRLKLWDLAS-GTLFKELRGHTDSITSLAFSPD-SGLIASASMDN 532
Query: 353 SIMFWHV 359
S+ W +
Sbjct: 533 SVRVWDI 539
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 70/168 (41%), Gaps = 5/168 (2%)
Query: 233 TEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDL 292
TE K+LRGH V + S ++S S+D ++ WD + H V D+
Sbjct: 333 TEMKILRGHCGPVYSTRFLADSSGLLSCSED--MSIRYWDLGSFTNTVLYQGHAYPVWDV 390
Query: 293 AWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADG 352
+ + + S D +++ + + ++ + GH + V +HP L ++G D
Sbjct: 391 DISPFSLYFASGSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNYL-ATGSTDK 448
Query: 353 SIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFW 400
++ W V + H + ++++ P G LA+ D K W
Sbjct: 449 TVRLWSAQQGNSVR-LFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLW 495
Score = 38.9 bits (89), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 317 NLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNII 376
N +E++ RGH + + GL S D SI +W +G+ + Q H +
Sbjct: 330 NTGTEMKILRGHCGPVYSTRFLADSSGLLSCS-EDMSIRYWDLGSFTNT-VLYQGHAYPV 387
Query: 377 WTMAWHPLGHILATGSNDHASKFWTRNR 404
W + P A+GS+D ++ W+ +R
Sbjct: 388 WDVDISPFSLYFASGSHDRTARLWSFDR 415
>sp|O75529|TAF5L_HUMAN TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1
SV=1
Length = 589
Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 93/178 (52%), Gaps = 5/178 (2%)
Query: 183 IKYWQS-NMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGH 241
I+YW + N +QGH + + SP FA+ S D T R+W F R ++ GH
Sbjct: 366 IRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGH 425
Query: 242 GADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWL 301
ADV CV +HP + + +GS D + V+LW + G ++ H+ V+ LA++ NG +L
Sbjct: 426 LADVDCVKFHPNSNYLATGSTD--KTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYL 483
Query: 302 VTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHV 359
+A D LK++D+ + + + RGH +++ + P GL +S D S+ W +
Sbjct: 484 ASAGEDQRLKLWDLAS-GTLYKELRGHTDNITSLTFSPD-SGLIASASMDNSVRVWDI 539
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 5/168 (2%)
Query: 233 TEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDL 292
TE K+LRGH V + S ++S S+D ++ WD + H V DL
Sbjct: 333 TEMKILRGHCGPVYSTRFLADSSGLLSCSED--MSIRYWDLGSFTNTVLYQGHAYPVWDL 390
Query: 293 AWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADG 352
+ + + S D +++ + + ++ + GH + V +HP L ++G D
Sbjct: 391 DISPYSLYFASGSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNYL-ATGSTDK 448
Query: 353 SIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFW 400
++ W V + H + ++A+ P G LA+ D K W
Sbjct: 449 TVRLWSAQQGNSVR-LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 495
>sp|A8NEG8|LIS1_COPC7 Nuclear distribution protein PAC1 OS=Coprinopsis cinerea (strain
Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=PAC1
PE=3 SV=3
Length = 434
Score = 99.8 bits (247), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 123/278 (44%), Gaps = 51/278 (18%)
Query: 169 HNGLWMVTSDHQGYIKYW--QSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRV 226
H G +VT +IK W Q+ N KTF GH ++ + F P D + S D T+RV
Sbjct: 160 HKGHLLVTCSSDLFIKIWDSQNEWKNTKTFVGHDHAVSAVRFMPGDQLIVSASRDRTIRV 219
Query: 227 WDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHK 286
+D + + L GH V+CV +++ SGSKD Q V+LWDP G+ + L H+
Sbjct: 220 FDVASTHQVRTLSGHSEWVRCVIPSADGTMLASGSKD--QTVRLWDPLTGEPKSELRGHE 277
Query: 287 STVMDLAW--------------------NQNGNWLVTASRDHLLKVFDIRNLSSEVQTFR 326
+ V +A+ ++G +L + +RD +K++D + ++
Sbjct: 278 NDVEAVAFAPISAYAAIRELAGIPNDRTKRHGLFLASGARDKTVKLWDTQT-GQMIRNLA 336
Query: 327 GHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAW----- 381
GH A+A+HP + L SS D ++ W + + + I +AH + + +AW
Sbjct: 337 GHDNWVRALAFHPSGKYLLSSSD-DKTVRVWELSTGRCLR-IVEAHSHFVAALAWGRQAA 394
Query: 382 -------------------HPLGHILATGSNDHASKFW 400
+ +++ATGS D K W
Sbjct: 395 GKSGSEKKVNGVDSVDAEPEKVVNVVATGSVDETIKIW 432
Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 237 VLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQ 296
VL GH A + + +HP S++ S S+D VK+WD + G+ TL H V DL ++
Sbjct: 103 VLTGHRAPLTSIAFHPQYSILASASEDT--TVKIWDWETGEFERTLKGHTKPVNDLDFDH 160
Query: 297 NGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMF 356
G+ LVT S D +K++D +N +TF GH SAV + P + L S D +I
Sbjct: 161 KGHLLVTCSSDLFIKIWDSQNEWKNTKTFVGHDHAVSAVRFMPGDQ-LIVSASRDRTIRV 219
Query: 357 WHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFW 400
+ V + +V + H + + G +LA+GS D + W
Sbjct: 220 FDVASTHQVRTLS-GHSEWVRCVIPSADGTMLASGSKDQTVRLW 262
Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 64/267 (23%)
Query: 195 TFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYK 254
GH+ + I+F P S A+ S+D TV++WD+ E+ L+GH V +D+
Sbjct: 103 VLTGHRAPLTSIAFHPQYSILASASEDTTVKIWDWETGEFERTLKGHTKPVNDLDFDHKG 162
Query: 255 SLIVSGSKDNQQPVKLWDPK-AGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVF 313
L+V+ S D +K+WD + + T H V + + +V+ASRD ++VF
Sbjct: 163 HLLVTCSSD--LFIKIWDSQNEWKNTKTFVGHDHAVSAVRFMPGDQLIVSASRDRTIRVF 220
Query: 314 D------IRNLS---------------------SEVQT--------------FRGHKKEA 332
D +R LS S+ QT RGH+ +
Sbjct: 221 DVASTHQVRTLSGHSEWVRCVIPSADGTMLASGSKDQTVRLWDPLTGEPKSELRGHENDV 280
Query: 333 SAVAWHP------------------QHEGLF-SSGGADGSIMFWHVGADKEVGCIPQAHD 373
AVA+ P + GLF +SG D ++ W + + + HD
Sbjct: 281 EAVAFAPISAYAAIRELAGIPNDRTKRHGLFLASGARDKTVKLWDTQTGQMIRNLA-GHD 339
Query: 374 NIIWTMAWHPLGHILATGSNDHASKFW 400
N + +A+HP G L + S+D + W
Sbjct: 340 NWVRALAFHPSGKYLLSSSDDKTVRVW 366
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 99.8 bits (247), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 8/257 (3%)
Query: 156 LAHDCAVRHMVW-SHNGLWMVTSDHQGYIKYWQ-SNMNNVKTFQGHKESIRGISFSPSDS 213
+AH V +V +G + T + W S N + + GH ++ I F+ S+
Sbjct: 17 VAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEE 76
Query: 214 KFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDP 273
+ S G++R+WD + L GH A + +D+HP + SGS D+ +KLWD
Sbjct: 77 RVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSN--IKLWDV 134
Query: 274 KAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEAS 333
+ + H V LA++ +G WL +AS D +K++D+ + F H +
Sbjct: 135 RRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIA-GKMITEFTSHTSAVN 193
Query: 334 AVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSN 393
V +HP +E L +SG AD ++ W + +G + ++ ++ ++P G L +GS
Sbjct: 194 VVQFHP-NEYLLASGSADRTVKLWDLEKFNMIGS-SEGETGVVRSVLFNPDGSCLYSGSE 251
Query: 394 DHASKF-WTRNRLGDPM 409
+ + W +R D +
Sbjct: 252 NTLRVYGWEPDRCFDVV 268
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 6/152 (3%)
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKT-FQGHKESIRGISFSPSDSKFA 216
H AVR + +S +G W+ ++ +K W + T F H ++ + F P++ A
Sbjct: 146 HTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLA 205
Query: 217 TCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG 276
+ S D TV++WD + G V+ V ++P S + SGS +N V W+P
Sbjct: 206 SGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGS-ENTLRVYGWEP--D 262
Query: 277 QALATLHAHKSTVMDLAWNQNGNWLVTASRDH 308
+ +H V DLA + N ++ S H
Sbjct: 263 RCFDVVHVGWGKVSDLAISNNQ--MIAVSYSH 292
>sp|Q8N136|WDR69_HUMAN Outer row dynein assembly protein 16 homolog OS=Homo sapiens
GN=WDR69 PE=1 SV=1
Length = 415
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 12/221 (5%)
Query: 184 KYWQ-SNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHG 242
K W N V T +GH I +SF+ S + T S D TV VWD + +L GH
Sbjct: 202 KLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHC 261
Query: 243 ADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLV 302
A++ ++ SLI++GS D + KLWD G+ +ATL H ++D ++ G +
Sbjct: 262 AEISSASFNWDCSLILTGSMD--KTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIA 319
Query: 303 TASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGAD 362
TAS D ++F + GH+ E S ++++PQ L +G +D + W D
Sbjct: 320 TASADGTARIFSAATRKC-IAKLEGHEGEISKISFNPQGNHLL-TGSSDKTARIW----D 373
Query: 363 KEVG-C--IPQAHDNIIWTMAWHPLGHILATGSNDHASKFW 400
+ G C + + H + I++ A++ G+I+ TGS D+ + W
Sbjct: 374 AQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 7/247 (2%)
Query: 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFS-PSDSK 214
AH + ++ + +G +T + K W + + T +GH+ + I+F+ P K
Sbjct: 90 AHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDK 149
Query: 215 FATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPK 274
AT S D T ++W RGH A++ C+ ++P +L+ +GS D KLWD +
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDT--TAKLWDIQ 207
Query: 275 AGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASA 334
G+ + TL H + ++ L++N +G+ ++T S DH + V+D + +V GH E S+
Sbjct: 208 NGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWD-ADTGRKVNILIGHCAEISS 266
Query: 335 VAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSND 394
+++ L +G D + W K V + HD+ I + G ++AT S D
Sbjct: 267 ASFNWDC-SLILTGSMDKTCKLWDATNGKCVATLT-GHDDEILDSCFDYTGKLIATASAD 324
Query: 395 HASKFWT 401
++ ++
Sbjct: 325 GTARIFS 331
Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 6/208 (2%)
Query: 194 KTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDW-HP 252
K + H + ++ + S S F T S D T ++WD E L GH V + + +P
Sbjct: 86 KVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNP 145
Query: 253 YKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKV 312
Y I +GS D + KLW + G+ T H + ++ L++N + T S D K+
Sbjct: 146 YGDKIATGSFD--KTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKL 203
Query: 313 FDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAH 372
+DI+N EV T RGH E +++++ + + +G D +++ W ++V I H
Sbjct: 204 WDIQN-GEEVYTLRGHSAEIISLSFNTSGDRII-TGSFDHTVVVWDADTGRKVN-ILIGH 260
Query: 373 DNIIWTMAWHPLGHILATGSNDHASKFW 400
I + +++ ++ TGS D K W
Sbjct: 261 CAEISSASFNWDCSLILTGSMDKTCKLW 288
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNN-VKTFQGHKESIRGISFSPSDSKFA 216
HD + + + G + T+ G + + + + +GH+ I ISF+P +
Sbjct: 302 HDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLL 361
Query: 217 TCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLW 271
T S D T R+WD +VL GH ++ ++ +++++GSKDN ++W
Sbjct: 362 TGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDN--TCRIW 414
>sp|Q7PS24|CIAO1_ANOGA Probable cytosolic iron-sulfur protein assembly protein Ciao1
OS=Anopheles gambiae GN=Ciao1 PE=3 SV=3
Length = 341
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 117/242 (48%), Gaps = 22/242 (9%)
Query: 190 MNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVW---DFYRCTEEKVLR-GHGADV 245
+ ++T GH + ++ P FA+C +D T+RVW D R + VL GH +
Sbjct: 4 LELLQTLTGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTI 63
Query: 246 KCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG--QALATLHAHKSTVMDLAWNQNGNWLVT 303
+ + W + S S D V +WD K+G + ATL H + V + W+++GN L T
Sbjct: 64 RELAWSCCGHYLASASFDT--TVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGNLLAT 121
Query: 304 ASRDHLLKVFDIRNLSSE------VQTFRGHKKEASAVAWHPQHEGLFSSGGADGSI-MF 356
SRD + +++I + + V GH ++ V WHPQ E L +S D +I M+
Sbjct: 122 CSRDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQ-EDLLASASYDNTIRMY 180
Query: 357 WHVGADKEVGCIP--QAHDNIIWTMAWHPLGHILATGSNDHASKFWTR----NRLGDPMR 410
AD E + ++H + +W++++ G LA+ S D K W + N LG P
Sbjct: 181 RQDLADSEWEMLEPLESHSSTVWSISFDATGQRLASCSEDTTVKVWQQYGPDNALGIPCP 240
Query: 411 DR 412
DR
Sbjct: 241 DR 242
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 117/280 (41%), Gaps = 40/280 (14%)
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVK---TFQGHKESIRGISFSPSDSK 214
H +R + WS G ++ ++ + W + T +GH ++ +++S S +
Sbjct: 59 HTRTIRELAWSCCGHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGNL 118
Query: 215 FATCSDDGTVRVW---------DFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQ 265
ATCS D +V +W D Y C VL GH DVK V WHP + L+ S S DN
Sbjct: 119 LATCSRDKSVWIWEIHHAPDQEDEYECV--AVLNGHTQDVKKVCWHPQEDLLASASYDNT 176
Query: 266 QPVKLWD--PKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVF---------- 313
+ D + L L +H STV ++++ G L + S D +KV+
Sbjct: 177 IRMYRQDLADSEWEMLEPLESHSSTVWSISFDATGQRLASCSEDTTVKVWQQYGPDNALG 236
Query: 314 ----DIRNLSSEVQTFRG-HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADK----- 363
D + V T G H + + W Q GL ++ D ++ + +D
Sbjct: 237 IPCPDRGTIWKCVCTLSGYHSRSVYDIDWCKQ-TGLLATACGDDTVRIFREASDSDRNEP 295
Query: 364 --EVGCIPQAHDNIIWTMAWHPLG-HILATGSNDHASKFW 400
E+ +AH +AWHP +L T S+D K W
Sbjct: 296 TFELVVTVEAHSQDANKVAWHPTVPGLLLTASDDGEIKLW 335
>sp|Q9UUG8|TUP12_SCHPO Transcriptional repressor tup12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup12 PE=1 SV=2
Length = 598
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 126/266 (47%), Gaps = 18/266 (6%)
Query: 152 EGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNV-KTFQGHKESIRGISFSP 210
E + D VR + +S +G ++ T I+ W V + GH++ I + FS
Sbjct: 339 ESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSK 398
Query: 211 SDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKL 270
+ S D TV +WD E+K++ V V + P I +GS D + +++
Sbjct: 399 DGKTLVSGSGDRTVCLWDV-EAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLD--KVIRI 455
Query: 271 WDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEV-------- 322
W +G + LH H+ +V +A++ +G +LV+ S D+ +K+++++ +S+
Sbjct: 456 W-TSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGG 514
Query: 323 ---QTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTM 379
QTF GHK +V P + + S G D +I FW + + Q H+N + ++
Sbjct: 515 ICKQTFTGHKDFILSVTVSPDGKWIIS-GSKDRTIQFWSPDSPHSQLTL-QGHNNSVISV 572
Query: 380 AWHPLGHILATGSNDHASKFWTRNRL 405
A P GH ATGS D ++ W+ L
Sbjct: 573 AVSPNGHCFATGSGDLRARIWSYEDL 598
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 93/229 (40%), Gaps = 18/229 (7%)
Query: 199 HKESIRGISFSPSDSKFATCSDDGTVRVWD------FYRCTEEKVLRGHGADVKCVDWHP 252
H I + FS +D KF + V++ EE R V+ V + P
Sbjct: 298 HTSVICYVRFS-ADGKFLATGCNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSP 356
Query: 253 YKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKV 312
+ +G +D Q +++WD + L H+ + L ++++G LV+ S D + +
Sbjct: 357 DGKYLATGVEDQQ--IRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCL 414
Query: 313 FDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAH 372
+D+ + E + + V + P + ++G D I W + Q H
Sbjct: 415 WDVE--AGEQKLILHTDDGVTTVMFSPDGQ-FIAAGSLDKVIRIWTSSGT----LVEQLH 467
Query: 373 --DNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLA 419
+ ++++A+ P G L +GS D+ K W + + Y + G+
Sbjct: 468 GHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGIC 516
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 131/282 (46%), Gaps = 9/282 (3%)
Query: 123 NATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRLA-HDCAVRHMVWSHNGLWMVTSDHQG 181
N AV A ++ +F M E RL H V + S +G + +
Sbjct: 1038 NHVIAVPNNLKLATVTTLQQALFEM---QERNRLEGHKDGVISISISRDGQTIASGSLDK 1094
Query: 182 YIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGH 241
IK W + +T GH++++ +SFSP A+ D T+++W T K + GH
Sbjct: 1095 TIKLWSRDGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGH 1154
Query: 242 GADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWL 301
V V + P + S S D+ +KLWD +GQ L TL H + V+ + ++ +G +
Sbjct: 1155 EQTVNNVYFSPDGKNLASASSDH--SIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTI 1212
Query: 302 VTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGA 361
S D +K++ R ++T GH+ +++++ P + L +S AD +I W +
Sbjct: 1213 AAGSEDKTVKLWH-RQDGKLLKTLNGHQDWVNSLSFSPDGKTL-ASASADKTIKLWRIAD 1270
Query: 362 DKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRN 403
K V + + H++ +W + + G +A+ S D+ K W R+
Sbjct: 1271 GKLVKTL-KGHNDSVWDVNFSSDGKAIASASRDNTIKLWNRH 1311
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 122/246 (49%), Gaps = 7/246 (2%)
Query: 156 LAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNV-KTFQGHKESIRGISFSPSDSK 214
LA + V + + H+G + T+ G I+ W S ++ KT G+K +I GISF+P
Sbjct: 1360 LAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNK-AIYGISFTPQGDL 1418
Query: 215 FATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPK 274
A+ + D TV++W K L GH +V V++ P + S S+DN VKLW+
Sbjct: 1419 IASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDN--TVKLWNVS 1476
Query: 275 AGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASA 334
G+ TL H V ++++ +G + +AS D ++++D + + +++ H +
Sbjct: 1477 DGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFS-GNLIKSLPAHNDLVYS 1535
Query: 335 VAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSND 394
V ++P + +S AD ++ W D + H N++++ ++ P G +A+ S D
Sbjct: 1536 VNFNPDG-SMLASTSADKTVKLWR-SHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASED 1593
Query: 395 HASKFW 400
K W
Sbjct: 1594 KTVKIW 1599
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 133/283 (46%), Gaps = 45/283 (15%)
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFAT 217
H+ +V + +S +G + ++ IK W + ++TF GH + ++F P + A+
Sbjct: 1280 HNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGIELETFTGHSGGVYAVNFLPDSNIIAS 1339
Query: 218 CSDDGTVRVWDFYRCTEEKVLRGH------------------GADVKCVDWH-------- 251
S D T+R+W + +VL G+ GAD WH
Sbjct: 1340 ASLDNTIRLWQRPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLK 1399
Query: 252 --------------PYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQN 297
P LI S + D + VK+W + G+AL TL H + V + ++ +
Sbjct: 1400 TLPGNKAIYGISFTPQGDLIASANAD--KTVKIWRVRDGKALKTLIGHDNEVNKVNFSPD 1457
Query: 298 GNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFW 357
G L +ASRD+ +K++++ + + +T +GH E V++ P + + +S AD +I W
Sbjct: 1458 GKTLASASRDNTVKLWNVSDGKFK-KTLKGHTDEVFWVSFSPDGK-IIASASADKTIRLW 1515
Query: 358 HVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFW 400
+ + +P AH+++++++ ++P G +LA+ S D K W
Sbjct: 1516 DSFSGNLIKSLP-AHNDLVYSVNFNPDGSMLASTSADKTVKLW 1557
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 25/259 (9%)
Query: 143 PIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQS-NMNNVKTFQGHKE 201
I+ +++TP+G +A +++ +K W+ + +KT GH
Sbjct: 1406 AIYGISFTPQGDLIA------------------SANADKTVKIWRVRDGKALKTLIGHDN 1447
Query: 202 SIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGS 261
+ ++FSP A+ S D TV++W+ +K L+GH +V V + P +I S S
Sbjct: 1448 EVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASAS 1507
Query: 262 KDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSE 321
D + ++LWD +G + +L AH V + +N +G+ L + S D +K++ +
Sbjct: 1508 AD--KTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHD-GHL 1564
Query: 322 VQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAW 381
+ TF GH + ++ P + +S D ++ W + + +PQ H + + +
Sbjct: 1565 LHTFSGHSNVVYSSSFSPDGRYI-ASASEDKTVKIWQIDGHL-LTTLPQ-HQAGVMSAIF 1621
Query: 382 HPLGHILATGSNDHASKFW 400
P G L +GS D +K W
Sbjct: 1622 SPDGKTLISGSLDTTTKIW 1640
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 140/347 (40%), Gaps = 90/347 (25%)
Query: 149 WTPEGRRL----AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQ-SNMNNVKTFQGHKESI 203
W+ +GR H+ AV + +S +G + + IK WQ S+ +KT GH++++
Sbjct: 1099 WSRDGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTV 1158
Query: 204 RGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKD 263
+ FSP A+ S D ++++WD L GH A V V + P I +GS+D
Sbjct: 1159 NNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSED 1218
Query: 264 NQ----------------------------------------QPVKLWDPKAGQALATLH 283
+ +KLW G+ + TL
Sbjct: 1219 KTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLK 1278
Query: 284 AHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQ--- 340
H +V D+ ++ +G + +ASRD+ +K+++ + E++TF GH AV + P
Sbjct: 1279 GHNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGI--ELETFTGHSGGVYAVNFLPDSNI 1336
Query: 341 ------------------------------------HEG-LFSSGGADGSIMFWHVGADK 363
H+G + ++ GADG+I WH
Sbjct: 1337 IASASLDNTIRLWQRPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGS 1396
Query: 364 EVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMR 410
+ +P + I+ +++ P G ++A+ + D K W R R G ++
Sbjct: 1397 LLKTLP--GNKAIYGISFTPQGDLIASANADKTVKIW-RVRDGKALK 1440
>sp|D3TLL6|LIS1_GLOMM Lissencephaly-1 homolog OS=Glossina morsitans morsitans PE=2 SV=1
Length = 411
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 30/255 (11%)
Query: 174 MVTSDHQGYIKYWQSNMNNV-KTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDF--- 229
M+++ IK W ++ +GH S++ I+F A+CS D ++++WDF
Sbjct: 123 MLSASEDAVIKIWDFETGEYERSLKGHTSSVQDIAFDSQGKLLASCSADLSIKLWDFQQS 182
Query: 230 YRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTV 289
Y C K + GH +V V + P ++S S+D Q +K+W+ G + T H+ +
Sbjct: 183 YDCV--KTMLGHDHNVSSVAFVPAGDYVLSASRD--QTIKMWEVATGYCVKTYSGHREWI 238
Query: 290 MDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHP---------- 339
+ + +GN + S DH ++++ I + + + R H +AW P
Sbjct: 239 RMVRVHMDGNIFASCSIDHSIRIWSINSRDCKAE-LRAHDHTVECIAWAPDISTTHINEA 297
Query: 340 --------QHEG-LFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILAT 390
H+G +SG D +I W VG + + HDN + + +HP G L +
Sbjct: 298 AGSDNKKGHHQGPFLASGSRDKTIRVWDVGVGLCLFVLT-GHDNWVRELTFHPGGKYLVS 356
Query: 391 GSNDHASKFW-TRNR 404
S+D + W RN+
Sbjct: 357 ASDDKTIRVWDLRNK 371
Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 145 FSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESI 203
F ++ L HD V + + G +++++ IK W+ VKT+ GH+E I
Sbjct: 179 FQQSYDCVKTMLGHDHNVSSVAFVPAGDYVLSASRDQTIKMWEVATGYCVKTYSGHREWI 238
Query: 204 RGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKS-------- 255
R + + FA+CS D ++R+W + LR H V+C+ W P S
Sbjct: 239 RMVRVHMDGNIFASCSIDHSIRIWSINSRDCKAELRAHDHTVECIAWAPDISTTHINEAA 298
Query: 256 ------------LIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVT 303
+ SGS+D + +++WD G L L H + V +L ++ G +LV+
Sbjct: 299 GSDNKKGHHQGPFLASGSRD--KTIRVWDVGVGLCLFVLTGHDNWVRELTFHPGGKYLVS 356
Query: 304 ASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFW 357
AS D ++V+D+RN ++T H+ ++V +H + + SG D ++ W
Sbjct: 357 ASDDKTIRVWDLRN-KRFMKTLYAHQHFCTSVDFHKKLPYVI-SGSVDNTVKVW 408
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 26/227 (11%)
Query: 195 TFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYK 254
+ GH+ SI + F P+ S + S+D +++WDF E+ L+GH + V+ + +
Sbjct: 103 SLSGHRASITRVIFHPTYSLMLSASEDAVIKIWDFETGEYERSLKGHTSSVQDIAFDSQG 162
Query: 255 SLIVSGSKDNQQPVKLWD-PKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVF 313
L+ S S D +KLWD ++ + T+ H V +A+ G+++++ASRD +K++
Sbjct: 163 KLLASCSAD--LSIKLWDFQQSYDCVKTMLGHDHNVSSVAFVPAGDYVLSASRDQTIKMW 220
Query: 314 DIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHD 373
++ V+T+ GH++ V H +F+S D SI W + + ++ +AHD
Sbjct: 221 EVAT-GYCVKTYSGHREWIRMVRVHMD-GNIFASCSIDHSIRIWSINS-RDCKAELRAHD 277
Query: 374 NIIWTMAWHP---LGHI-----------------LATGSNDHASKFW 400
+ + +AW P HI LA+GS D + W
Sbjct: 278 HTVECIAWAPDISTTHINEAAGSDNKKGHHQGPFLASGSRDKTIRVW 324
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 4/170 (2%)
Query: 234 EEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLA 293
E+ L GH A + V +HP SL++S S+D +K+WD + G+ +L H S+V D+A
Sbjct: 100 EKFSLSGHRASITRVIFHPTYSLMLSASED--AVIKIWDFETGEYERSLKGHTSSVQDIA 157
Query: 294 WNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGS 353
++ G L + S D +K++D + V+T GH S+VA+ P + + S D +
Sbjct: 158 FDSQGKLLASCSADLSIKLWDFQQSYDCVKTMLGHDHNVSSVAFVPAGDYVL-SASRDQT 216
Query: 354 IMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRN 403
I W V V H I + H G+I A+ S DH+ + W+ N
Sbjct: 217 IKMWEVATGYCVKTYS-GHREWIRMVRVHMDGNIFASCSIDHSIRIWSIN 265
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 23/155 (14%)
Query: 183 IKYWQSNMNNVKT-FQGHKESIRGISFSP------------SDSK--------FATCSDD 221
I+ W N + K + H ++ I+++P SD+K A+ S D
Sbjct: 259 IRIWSINSRDCKAELRAHDHTVECIAWAPDISTTHINEAAGSDNKKGHHQGPFLASGSRD 318
Query: 222 GTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALAT 281
T+RVWD VL GH V+ + +HP +VS S D + +++WD + + + T
Sbjct: 319 KTIRVWDVGVGLCLFVLTGHDNWVRELTFHPGGKYLVSASDD--KTIRVWDLRNKRFMKT 376
Query: 282 LHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIR 316
L+AH+ + +++ ++++ S D+ +KV++ R
Sbjct: 377 LYAHQHFCTSVDFHKKLPYVISGSVDNTVKVWECR 411
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 9/204 (4%)
Query: 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNN-VKTFQGHKESIRGISFSPSDSKF 215
AH VR + + +G +VT+ +K W ++ + + H +R FSP
Sbjct: 101 AHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLI 160
Query: 216 ATCSDDGTVRVWDFYRCTEEKV--LRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDP 273
+ SDD TV++WD + + E + HG V VD+HP + I + DN VK+WD
Sbjct: 161 VSASDDKTVKLWD--KTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDN--TVKVWDA 216
Query: 274 KAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEAS 333
+ + L H + V L+++ +GN+L+TAS D LK+ D+ + T GH+ A+
Sbjct: 217 RTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLME-GRLLYTLHGHQGPAT 275
Query: 334 AVAWHPQHEGLFSSGGADGSIMFW 357
VA+ E F+SGG+D +M W
Sbjct: 276 TVAFSRTGE-YFASGGSDEQVMVW 298
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 5/204 (2%)
Query: 196 FQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKS 255
F GHK+++ ++FSPS A+ S D TVR+W E V R H A V+ V +
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ 116
Query: 256 LIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDI 315
+V+ S D + VK+W + L +L H + V ++ +G +V+AS D +K++D
Sbjct: 117 SLVTASDD--KTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD- 173
Query: 316 RNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNI 375
+ + ++ H + V +HP + ++ G D ++ W + + Q H
Sbjct: 174 KTSRECIHSYCEHGGFVTYVDFHPSGTCI-AAAGMDNTVKVWDARTHRLLQHY-QLHSAA 231
Query: 376 IWTMAWHPLGHILATGSNDHASKF 399
+ +++HP G+ L T S+D K
Sbjct: 232 VNALSFHPSGNYLITASSDSTLKI 255
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 11/208 (5%)
Query: 196 FQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKS 255
F+GH++++ + FS + A+ S D T+ +W + GH V CV++ P
Sbjct: 15 FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query: 256 LIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDI 315
L+ SGS+D + V++W P AH +TV + + +G LVTAS D +KV+
Sbjct: 75 LLASGSRD--KTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 316 ---RNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAH 372
R L S Q H + P L S D ++ W + + + + H
Sbjct: 133 HRQRFLFSLTQ----HINWVRCAKFSPDGR-LIVSASDDKTVKLWDKTSRECIHSYCE-H 186
Query: 373 DNIIWTMAWHPLGHILATGSNDHASKFW 400
+ + +HP G +A D+ K W
Sbjct: 187 GGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 5/169 (2%)
Query: 235 EKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAW 294
E+ +GH V CVD+ + SGS D+ + +W K HK V + +
Sbjct: 12 ERHFKGHRDAVTCVDFSLNTKHLASGSMDS--TLMIWHMKPQSRAYRFTGHKDAVTCVNF 69
Query: 295 NQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSI 354
+ +G+ L + SRD ++++ + N+ E FR H +V + + L ++ D ++
Sbjct: 70 SPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASD-DKTV 127
Query: 355 MFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRN 403
W + + + Q H N + + P G ++ + S+D K W +
Sbjct: 128 KVWSTHRQRFLFSLTQ-HINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Score = 41.6 bits (96), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 325 FRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPL 384
F+GH+ + V + + L +SG D ++M WH+ H + + + + P
Sbjct: 15 FKGHRDAVTCVDFSLNTKHL-ASGSMDSTLMIWHMKPQSRAYRFT-GHKDAVTCVNFSPS 72
Query: 385 GHILATGSNDHASKFWTRNRLGD 407
GH+LA+GS D + W N G+
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGE 95
Score = 40.0 bits (92), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 285 HKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGL 344
H+ V + ++ N L + S D L ++ ++ S F GHK + V + P L
Sbjct: 18 HRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKP-QSRAYRFTGHKDAVTCVNFSPSGH-L 75
Query: 345 FSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404
+SG D ++ W V K + +AH + ++ + G L T S+D K W+ +R
Sbjct: 76 LASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHR 134
>sp|Q0P593|WDR69_BOVIN Outer row dynein assembly protein 16 homolog OS=Bos taurus GN=WDR69
PE=2 SV=1
Length = 415
Score = 97.1 bits (240), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 121/247 (48%), Gaps = 7/247 (2%)
Query: 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFS-PSDSK 214
AH + ++ + +G +T + K W + + T +GH+ + I+F+ P K
Sbjct: 90 AHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDK 149
Query: 215 FATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPK 274
AT S D T ++W RGH A++ C+ ++P +L+ +GS D KLWD +
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDT--TAKLWDIQ 207
Query: 275 AGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASA 334
+G+ + TL H + ++ L++N +GN ++T S DH + V++ + +V T GH E S+
Sbjct: 208 SGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWE-ADTGRKVYTLIGHCAEISS 266
Query: 335 VAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSND 394
++ L +G D + W K V + HD+ I + G ++AT S D
Sbjct: 267 AVFNWDC-SLILTGSMDKTCKLWDAVNGKCVATLT-GHDDEILDSCFDYTGKLIATASAD 324
Query: 395 HASKFWT 401
++ ++
Sbjct: 325 GTARIFS 331
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 11/211 (5%)
Query: 193 VKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHP 252
V T GH I +SF+ S ++ T S D TV VW+ + L GH A++ ++
Sbjct: 212 VFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNW 271
Query: 253 YKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKV 312
SLI++GS D + KLWD G+ +ATL H ++D ++ G + TAS D ++
Sbjct: 272 DCSLILTGSMD--KTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARI 329
Query: 313 FDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVG-C--IP 369
F V GH+ E S ++++PQ L +G +D + W D + G C +
Sbjct: 330 FSAATREC-VTKLEGHEGEISKISFNPQGNRLL-TGSSDKTARIW----DAQTGQCLQVL 383
Query: 370 QAHDNIIWTMAWHPLGHILATGSNDHASKFW 400
+ H + I++ A++ G I+ TGS D+ + W
Sbjct: 384 EGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKT-FQGHKESIRGISFSPSDSKFA 216
HD + + + G + T+ G + + + T +GH+ I ISF+P ++
Sbjct: 302 HDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLL 361
Query: 217 TCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLW 271
T S D T R+WD +VL GH ++ ++ +I++GSKDN ++W
Sbjct: 362 TGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDN--TCRIW 414
>sp|Q4R8E7|WDR69_MACFA Outer row dynein assembly protein 16 homolog OS=Macaca fascicularis
GN=WDR69 PE=2 SV=1
Length = 415
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 7/247 (2%)
Query: 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFS-PSDSK 214
AH + ++ + +G +T + K W + + T +GH+ + I+F+ P K
Sbjct: 90 AHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDK 149
Query: 215 FATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPK 274
AT S D T ++W RGH A++ C+ ++P +L+ +GS D KLW+ +
Sbjct: 150 TATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDT--TAKLWNIQ 207
Query: 275 AGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASA 334
G+ + TL H + ++ L++N +G+ ++T S DH + V+D + +V GH E S+
Sbjct: 208 NGEEVCTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWD-ADTGGKVNILIGHCAEISS 266
Query: 335 VAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSND 394
++ L +G D + M W K V + HD+ I + G ++AT S D
Sbjct: 267 ALFNWDC-SLILTGSMDKTCMLWDATNGKCVATLT-GHDDEILDSCFDYTGKLIATASAD 324
Query: 395 HASKFWT 401
++ ++
Sbjct: 325 GTARIFS 331
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 109/221 (49%), Gaps = 12/221 (5%)
Query: 184 KYWQ-SNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHG 242
K W N V T +GH I +SF+ S + T S D TV VWD + +L GH
Sbjct: 202 KLWNIQNGEEVCTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGGKVNILIGHC 261
Query: 243 ADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLV 302
A++ ++ SLI++GS D + LWD G+ +ATL H ++D ++ G +
Sbjct: 262 AEISSALFNWDCSLILTGSMD--KTCMLWDATNGKCVATLTGHDDEILDSCFDYTGKLIA 319
Query: 303 TASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGAD 362
TAS D ++F + GH+ E S ++++PQ L +G +D + W D
Sbjct: 320 TASADGTARIFSAATRKC-IAKLEGHEGEISKISFNPQGNRLL-TGSSDKTARIW----D 373
Query: 363 KEVG-C--IPQAHDNIIWTMAWHPLGHILATGSNDHASKFW 400
+ G C + + H + I++ ++ G+I+ TGS D+ + W
Sbjct: 374 AQTGQCLQVLEGHTDEIFSCTFNYKGNIVITGSKDNTCRIW 414
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQS-NMNNVKTFQGHKESIRGISFSPSDSKFA 216
HD + + + G + T+ G + + + + +GH+ I ISF+P ++
Sbjct: 302 HDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNRLL 361
Query: 217 TCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLW 271
T S D T R+WD +VL GH ++ ++ +++++GSKDN ++W
Sbjct: 362 TGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCTFNYKGNIVITGSKDN--TCRIW 414
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.139 0.458
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 458,502,984
Number of Sequences: 539616
Number of extensions: 29071219
Number of successful extensions: 285630
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2649
Number of HSP's successfully gapped in prelim test: 3364
Number of HSP's that attempted gapping in prelim test: 83318
Number of HSP's gapped (non-prelim): 56415
length of query: 877
length of database: 191,569,459
effective HSP length: 126
effective length of query: 751
effective length of database: 123,577,843
effective search space: 92806960093
effective search space used: 92806960093
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)