Query psy13969
Match_columns 877
No_of_seqs 1053 out of 5859
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 16:14:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13969.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13969hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.2E-38 4E-43 359.4 39.9 286 155-452 104-409 (410)
2 3ow8_A WD repeat-containing pr 100.0 3.5E-38 1.2E-42 343.1 38.3 283 157-452 30-319 (321)
3 2ynn_A Coatomer subunit beta'; 100.0 3.4E-38 1.2E-42 340.5 36.8 287 155-453 9-301 (304)
4 4gqb_B Methylosome protein 50; 100.0 2.2E-37 7.5E-42 339.8 40.4 241 158-404 81-331 (344)
5 4gqb_B Methylosome protein 50; 100.0 4E-38 1.4E-42 345.7 33.2 284 157-454 28-331 (344)
6 1got_B GT-beta; complex (GTP-b 100.0 7.7E-37 2.6E-41 335.5 40.8 283 156-451 52-340 (340)
7 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.3E-37 1.8E-41 337.5 36.2 295 157-455 13-336 (345)
8 3ow8_A WD repeat-containing pr 100.0 2.5E-36 8.7E-41 328.5 40.8 242 157-403 78-320 (321)
9 1vyh_C Platelet-activating fac 100.0 8.2E-37 2.8E-41 344.4 37.5 260 139-403 106-410 (410)
10 4g56_B MGC81050 protein; prote 100.0 2.5E-36 8.4E-41 333.8 37.0 261 140-406 41-345 (357)
11 2pbi_B Guanine nucleotide-bind 100.0 6.8E-36 2.3E-40 329.9 40.3 285 155-451 60-354 (354)
12 3frx_A Guanine nucleotide-bind 100.0 6.1E-36 2.1E-40 325.2 38.3 291 154-453 12-316 (319)
13 1got_B GT-beta; complex (GTP-b 100.0 1.2E-35 4E-40 326.1 39.6 257 139-401 53-340 (340)
14 4g56_B MGC81050 protein; prote 100.0 2.1E-36 7.3E-41 334.3 32.6 286 156-455 39-344 (357)
15 4ery_A WD repeat-containing pr 100.0 4.2E-35 1.4E-39 317.2 39.9 285 157-453 21-311 (312)
16 1nr0_A Actin interacting prote 100.0 2.4E-35 8.4E-40 350.1 41.4 306 140-454 102-567 (611)
17 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.1E-35 1.7E-39 321.7 40.8 246 158-406 60-337 (345)
18 2pbi_B Guanine nucleotide-bind 100.0 4.2E-35 1.4E-39 323.5 40.1 258 139-401 62-354 (354)
19 3iz6_a 40S ribosomal protein R 100.0 4.1E-36 1.4E-40 335.1 31.9 292 156-454 63-375 (380)
20 2hes_X YDR267CP; beta-propelle 100.0 1.7E-35 5.9E-40 323.3 36.1 288 156-453 11-327 (330)
21 2xzm_R RACK1; ribosome, transl 100.0 1.3E-34 4.5E-39 318.1 42.7 290 154-453 16-339 (343)
22 1nr0_A Actin interacting prote 100.0 5.4E-35 1.9E-39 347.1 42.2 242 157-404 57-355 (611)
23 2ymu_A WD-40 repeat protein; u 100.0 1.1E-34 3.6E-39 342.1 42.2 294 140-451 261-577 (577)
24 1erj_A Transcriptional repress 100.0 2.2E-34 7.6E-39 322.6 38.3 283 156-453 61-388 (393)
25 1gxr_A ESG1, transducin-like e 100.0 8.1E-34 2.8E-38 309.4 41.3 279 157-452 49-335 (337)
26 2pm7_B Protein transport prote 100.0 2.8E-34 9.7E-39 308.7 36.9 246 157-404 7-285 (297)
27 1erj_A Transcriptional repress 100.0 4.8E-34 1.6E-38 319.9 39.5 239 161-404 125-389 (393)
28 2hes_X YDR267CP; beta-propelle 100.0 4.1E-34 1.4E-38 312.4 36.9 243 158-404 57-328 (330)
29 2ynn_A Coatomer subunit beta'; 100.0 1.1E-33 3.7E-38 305.3 39.0 259 140-404 12-302 (304)
30 2pm9_A Protein WEB1, protein t 100.0 5.5E-35 1.9E-39 329.3 29.4 295 156-454 64-414 (416)
31 3iz6_a 40S ribosomal protein R 100.0 1.5E-34 5.1E-39 322.4 31.0 262 139-404 64-375 (380)
32 2ymu_A WD-40 repeat protein; u 100.0 1.8E-33 6.1E-38 331.6 41.4 296 140-453 220-538 (577)
33 4ery_A WD repeat-containing pr 100.0 4.8E-33 1.6E-37 301.1 40.6 261 139-403 21-311 (312)
34 1r5m_A SIR4-interacting protei 100.0 7.8E-34 2.7E-38 320.0 35.1 288 158-453 107-424 (425)
35 3frx_A Guanine nucleotide-bind 100.0 8.9E-33 3.1E-37 300.2 41.3 241 157-404 63-317 (319)
36 3dm0_A Maltose-binding peripla 100.0 2.1E-33 7.2E-38 338.9 39.2 292 154-453 377-692 (694)
37 3vl1_A 26S proteasome regulato 100.0 1.3E-33 4.4E-38 318.8 33.2 290 160-453 98-418 (420)
38 3bg1_A Protein SEC13 homolog; 100.0 4E-34 1.4E-38 310.5 26.1 245 157-404 11-293 (316)
39 3zwl_B Eukaryotic translation 100.0 1.8E-32 6.3E-37 302.5 39.2 285 156-454 29-346 (369)
40 4aow_A Guanine nucleotide-bind 100.0 2.6E-32 8.9E-37 298.2 39.6 292 155-454 34-337 (340)
41 1k8k_C P40, ARP2/3 complex 41 100.0 6E-33 2E-37 307.4 34.6 292 157-454 6-361 (372)
42 3dwl_C Actin-related protein 2 100.0 1.6E-34 5.6E-39 321.2 21.7 240 158-403 10-280 (377)
43 1sq9_A Antiviral protein SKI8; 100.0 3.7E-33 1.3E-37 312.4 32.3 287 157-453 14-394 (397)
44 2xzm_R RACK1; ribosome, transl 100.0 8.5E-32 2.9E-36 295.7 40.5 241 157-404 74-340 (343)
45 1gxr_A ESG1, transducin-like e 100.0 1.7E-31 6E-36 290.9 40.7 237 158-402 96-335 (337)
46 3k26_A Polycomb protein EED; W 100.0 5.2E-33 1.8E-37 306.7 28.9 288 157-453 16-365 (366)
47 3i2n_A WD repeat-containing pr 100.0 7.6E-33 2.6E-37 304.5 29.8 293 157-454 16-353 (357)
48 2pm9_A Protein WEB1, protein t 100.0 4.2E-33 1.4E-37 313.9 26.1 287 158-456 11-339 (416)
49 3ei3_B DNA damage-binding prot 100.0 4.7E-32 1.6E-36 302.3 33.5 284 156-454 70-382 (383)
50 3vl1_A 26S proteasome regulato 100.0 8.6E-33 2.9E-37 312.0 27.0 282 161-454 58-365 (420)
51 3f3f_A Nucleoporin SEH1; struc 100.0 9.2E-32 3.2E-36 293.7 33.4 247 156-405 8-338 (351)
52 3jrp_A Fusion protein of prote 100.0 1.2E-31 4.1E-36 297.4 34.5 248 155-404 7-287 (379)
53 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-32 4.3E-37 317.7 27.2 308 141-455 133-518 (524)
54 3k26_A Polycomb protein EED; W 100.0 7.3E-32 2.5E-36 297.5 32.3 240 158-403 68-365 (366)
55 3dw8_B Serine/threonine-protei 100.0 5.3E-32 1.8E-36 308.1 32.0 290 155-452 24-444 (447)
56 1k8k_C P40, ARP2/3 complex 41 100.0 1.8E-31 6.3E-36 295.4 35.2 243 157-404 50-361 (372)
57 3zwl_B Eukaryotic translation 100.0 7.8E-31 2.7E-35 289.4 40.1 260 139-404 30-346 (369)
58 3gre_A Serine/threonine-protei 100.0 2.6E-32 8.9E-37 310.1 29.0 298 149-451 48-437 (437)
59 2pm7_B Protein transport prote 100.0 2.1E-31 7.3E-36 286.2 34.1 254 194-453 3-284 (297)
60 1sq9_A Antiviral protein SKI8; 100.0 1.7E-31 5.9E-36 298.8 34.1 243 157-404 60-395 (397)
61 3i2n_A WD repeat-containing pr 100.0 1.3E-31 4.6E-36 294.5 32.5 244 157-405 63-354 (357)
62 4aez_A CDC20, WD repeat-contai 100.0 1.9E-31 6.4E-36 299.7 34.1 279 161-454 95-380 (401)
63 3ei3_B DNA damage-binding prot 100.0 2.8E-31 9.7E-36 295.9 35.1 238 158-404 117-382 (383)
64 4h5i_A Guanine nucleotide-exch 100.0 5.3E-32 1.8E-36 299.9 28.5 237 161-404 75-343 (365)
65 1r5m_A SIR4-interacting protei 100.0 2.5E-31 8.6E-36 299.4 34.3 283 157-455 43-362 (425)
66 4e54_B DNA damage-binding prot 100.0 6.3E-32 2.1E-36 307.0 28.6 285 157-454 117-430 (435)
67 3dm0_A Maltose-binding peripla 100.0 9.1E-31 3.1E-35 315.9 39.0 242 157-404 428-693 (694)
68 3odt_A Protein DOA1; ubiquitin 100.0 1.3E-30 4.3E-35 281.0 35.9 277 156-455 15-297 (313)
69 4a11_B DNA excision repair pro 100.0 1.1E-30 3.8E-35 292.7 36.2 282 157-453 41-404 (408)
70 4aow_A Guanine nucleotide-bind 100.0 6.7E-30 2.3E-34 279.0 40.5 260 139-404 36-337 (340)
71 2xyi_A Probable histone-bindin 100.0 5.8E-31 2E-35 298.5 33.1 246 156-404 125-410 (430)
72 1yfq_A Cell cycle arrest prote 100.0 3.9E-31 1.3E-35 289.3 30.1 271 157-446 9-315 (342)
73 4gga_A P55CDC, cell division c 100.0 5.4E-30 1.8E-34 289.7 40.3 280 159-454 105-395 (420)
74 3dwl_C Actin-related protein 2 100.0 7.1E-32 2.4E-36 299.9 24.5 242 155-402 51-377 (377)
75 3mkq_A Coatomer beta'-subunit; 100.0 5.8E-31 2E-35 323.5 34.9 288 155-454 9-302 (814)
76 4aez_A CDC20, WD repeat-contai 100.0 1.2E-29 4.2E-34 284.8 38.7 241 158-405 133-381 (401)
77 4e54_B DNA damage-binding prot 100.0 2.6E-31 8.8E-36 302.0 25.3 242 158-404 163-430 (435)
78 3odt_A Protein DOA1; ubiquitin 100.0 1.9E-29 6.3E-34 271.9 37.8 235 157-405 57-297 (313)
79 3v7d_B Cell division control p 100.0 9.4E-30 3.2E-34 291.4 37.6 276 157-454 119-421 (464)
80 3bg1_A Protein SEC13 homolog; 100.0 5.8E-31 2E-35 285.5 25.3 252 195-453 8-292 (316)
81 2aq5_A Coronin-1A; WD40 repeat 100.0 1.8E-30 6.1E-35 291.7 29.3 280 164-454 39-342 (402)
82 2oaj_A Protein SNI1; WD40 repe 100.0 2.3E-30 8E-35 319.1 32.6 308 140-455 16-520 (902)
83 4gga_A P55CDC, cell division c 100.0 7.6E-29 2.6E-33 280.2 41.8 241 158-405 146-396 (420)
84 3gre_A Serine/threonine-protei 100.0 6.3E-30 2.2E-34 290.4 32.9 259 138-401 60-437 (437)
85 3mkq_A Coatomer beta'-subunit; 100.0 1.7E-29 5.9E-34 310.4 38.9 260 140-404 12-302 (814)
86 1p22_A F-BOX/WD-repeat protein 100.0 1.5E-29 5.2E-34 287.4 35.5 280 157-456 131-416 (435)
87 1pgu_A Actin interacting prote 100.0 1.7E-29 5.8E-34 299.6 36.3 277 157-453 61-365 (615)
88 1pgu_A Actin interacting prote 100.0 1.7E-29 5.8E-34 299.6 35.7 285 157-454 16-328 (615)
89 3sfz_A APAF-1, apoptotic pepti 100.0 2E-29 6.9E-34 324.5 39.3 293 157-455 613-993 (1249)
90 2j04_B YDR362CP, TAU91; beta p 100.0 1.8E-30 6.1E-35 299.7 26.3 243 157-404 205-517 (524)
91 2aq5_A Coronin-1A; WD40 repeat 100.0 1.3E-29 4.6E-34 284.6 32.4 245 156-404 78-342 (402)
92 4h5i_A Guanine nucleotide-exch 100.0 2.1E-30 7.2E-35 287.0 25.0 281 159-454 14-343 (365)
93 4ggc_A P55CDC, cell division c 100.0 1.4E-28 4.7E-33 265.9 38.2 277 162-454 28-315 (318)
94 1yfq_A Cell cycle arrest prote 100.0 3.7E-29 1.3E-33 273.5 34.1 236 157-402 54-322 (342)
95 3sfz_A APAF-1, apoptotic pepti 100.0 5.1E-29 1.7E-33 320.8 40.5 305 139-455 613-1035(1249)
96 3jro_A Fusion protein of prote 100.0 8.7E-30 3E-34 309.4 29.7 247 156-404 6-285 (753)
97 3mmy_A MRNA export factor; mRN 100.0 3.5E-29 1.2E-33 276.1 31.8 242 157-403 37-345 (368)
98 3dw8_B Serine/threonine-protei 100.0 2.8E-29 9.6E-34 285.5 31.7 237 160-402 94-444 (447)
99 2j04_A TAU60, YPL007P, hypothe 100.0 1.2E-29 4E-34 285.3 28.0 286 139-445 13-353 (588)
100 3v7d_B Cell division control p 100.0 9.9E-29 3.4E-33 282.9 36.4 274 157-450 160-459 (464)
101 3jrp_A Fusion protein of prote 100.0 5E-29 1.7E-33 276.2 32.6 257 192-454 3-287 (379)
102 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.7E-28 1.9E-32 275.2 40.9 279 157-454 157-442 (445)
103 4ggc_A P55CDC, cell division c 100.0 9.3E-28 3.2E-32 259.4 40.0 241 157-404 65-315 (318)
104 2oaj_A Protein SNI1; WD40 repe 100.0 7.3E-29 2.5E-33 305.7 35.0 241 154-401 12-309 (902)
105 2vdu_B TRNA (guanine-N(7)-)-me 100.0 8.4E-29 2.9E-33 282.6 32.6 266 159-434 4-366 (450)
106 2xyi_A Probable histone-bindin 100.0 5E-29 1.7E-33 282.6 30.2 259 194-455 122-411 (430)
107 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.1E-27 3.9E-32 272.7 38.3 276 156-455 115-392 (445)
108 4gq1_A NUP37; propeller, trans 100.0 9.2E-29 3.2E-33 276.8 25.6 257 141-402 69-387 (393)
109 3f3f_A Nucleoporin SEH1; struc 100.0 3.7E-28 1.3E-32 265.0 29.7 256 194-454 5-337 (351)
110 3vu4_A KMHSV2; beta-propeller 100.0 1.4E-27 4.9E-32 263.3 32.9 283 156-453 16-335 (355)
111 4a11_B DNA excision repair pro 100.0 4.4E-28 1.5E-32 271.4 28.1 271 180-455 22-366 (408)
112 1p22_A F-BOX/WD-repeat protein 100.0 1.5E-27 5.2E-32 270.8 32.0 232 157-405 171-415 (435)
113 2j04_A TAU60, YPL007P, hypothe 100.0 7.9E-29 2.7E-33 278.6 20.9 261 158-451 14-294 (588)
114 3lrv_A PRE-mRNA-splicing facto 100.0 6.5E-28 2.2E-32 264.7 26.8 264 166-450 43-329 (343)
115 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.1E-27 1.4E-31 268.5 32.8 241 158-405 101-392 (450)
116 3bws_A Protein LP49; two-domai 100.0 1.4E-26 4.9E-31 262.2 31.8 281 158-453 121-431 (433)
117 3jro_A Fusion protein of prote 100.0 6.7E-27 2.3E-31 284.0 30.5 255 193-454 2-285 (753)
118 3mmy_A MRNA export factor; mRN 100.0 2.4E-26 8.1E-31 253.3 29.8 240 191-442 30-335 (368)
119 4gq1_A NUP37; propeller, trans 99.9 3.8E-27 1.3E-31 263.8 22.7 291 147-450 3-385 (393)
120 3vu4_A KMHSV2; beta-propeller 99.9 1.1E-25 3.9E-30 248.0 31.7 254 139-404 17-336 (355)
121 1l0q_A Surface layer protein; 99.9 4.2E-25 1.4E-29 246.5 35.8 266 172-454 3-275 (391)
122 2w18_A PALB2, fancn, partner a 99.9 3.1E-26 1.1E-30 242.3 24.9 232 141-402 86-355 (356)
123 3lrv_A PRE-mRNA-splicing facto 99.9 1.4E-25 4.7E-30 246.1 26.5 231 159-402 76-331 (343)
124 1l0q_A Surface layer protein; 99.9 6.5E-24 2.2E-28 236.8 34.9 241 157-405 29-276 (391)
125 3bws_A Protein LP49; two-domai 99.9 5.7E-24 2E-28 240.8 34.9 239 157-404 167-432 (433)
126 2w18_A PALB2, fancn, partner a 99.9 2.5E-24 8.5E-29 227.8 24.8 213 138-359 108-355 (356)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.5E-22 8.5E-27 226.1 34.1 263 157-434 115-409 (415)
128 1nir_A Nitrite reductase; hemo 99.9 6.2E-22 2.1E-26 230.0 32.5 287 161-455 180-515 (543)
129 2ojh_A Uncharacterized protein 99.9 2.3E-22 8E-27 213.7 26.5 259 176-443 17-292 (297)
130 1nir_A Nitrite reductase; hemo 99.9 1.6E-21 5.3E-26 226.7 31.9 285 166-455 144-459 (543)
131 3u4y_A Uncharacterized protein 99.9 3.8E-21 1.3E-25 209.1 30.6 285 165-455 3-305 (331)
132 2hqs_A Protein TOLB; TOLB, PAL 99.9 5.9E-21 2E-25 214.9 32.4 222 157-386 176-410 (415)
133 2ecf_A Dipeptidyl peptidase IV 99.9 6.5E-22 2.2E-26 240.3 26.3 281 159-453 36-412 (741)
134 2ecf_A Dipeptidyl peptidase IV 99.9 2.3E-21 7.8E-26 235.5 30.3 277 162-452 111-457 (741)
135 3vgz_A Uncharacterized protein 99.9 1.3E-20 4.4E-25 206.5 33.0 270 158-441 39-332 (353)
136 1xfd_A DIP, dipeptidyl aminope 99.9 2.9E-21 1E-25 233.9 28.3 277 161-442 62-429 (723)
137 1ri6_A Putative isomerase YBHE 99.9 1.2E-20 4.1E-25 205.6 29.8 273 173-453 7-307 (343)
138 2ojh_A Uncharacterized protein 99.9 8.4E-21 2.9E-25 201.6 25.2 234 156-395 38-293 (297)
139 1ri6_A Putative isomerase YBHE 99.9 4.7E-20 1.6E-24 200.9 30.9 242 157-404 35-308 (343)
140 2z3z_A Dipeptidyl aminopeptida 99.9 1.5E-20 5.1E-25 227.0 29.5 282 160-455 82-436 (706)
141 1xfd_A DIP, dipeptidyl aminope 99.9 3.2E-21 1.1E-25 233.5 22.1 279 162-453 19-392 (723)
142 3hfq_A Uncharacterized protein 99.9 2.7E-19 9.2E-24 196.0 33.2 258 143-404 17-317 (347)
143 2z3z_A Dipeptidyl aminopeptida 99.9 4.1E-20 1.4E-24 223.1 28.2 244 158-405 119-436 (706)
144 3vgz_A Uncharacterized protein 99.8 9.1E-19 3.1E-23 191.7 34.2 231 158-395 87-335 (353)
145 3o4h_A Acylamino-acid-releasin 99.8 3.1E-20 1.1E-24 218.8 23.5 269 159-453 21-314 (582)
146 1k32_A Tricorn protease; prote 99.8 8.6E-20 2.9E-24 229.9 28.0 272 161-454 297-637 (1045)
147 3u4y_A Uncharacterized protein 99.8 4.7E-19 1.6E-23 192.4 30.1 242 159-404 40-304 (331)
148 2oit_A Nucleoporin 214KDA; NH2 99.8 5E-20 1.7E-24 208.1 23.1 199 159-362 36-279 (434)
149 1pby_B Quinohemoprotein amine 99.8 4.3E-19 1.5E-23 192.7 26.8 265 172-454 2-310 (337)
150 1k32_A Tricorn protease; prote 99.8 4.1E-19 1.4E-23 223.7 30.1 232 161-403 246-501 (1045)
151 2oit_A Nucleoporin 214KDA; NH2 99.8 9.7E-20 3.3E-24 205.8 21.0 213 181-405 23-279 (434)
152 1pby_B Quinohemoprotein amine 99.8 6.8E-19 2.3E-23 191.1 26.5 234 161-405 35-311 (337)
153 1jmx_B Amine dehydrogenase; ox 99.8 1.2E-18 4E-23 190.4 25.7 229 164-404 4-325 (349)
154 3scy_A Hypothetical bacterial 99.8 2.2E-17 7.4E-22 181.9 36.1 257 141-404 26-337 (361)
155 3hfq_A Uncharacterized protein 99.8 4.4E-18 1.5E-22 186.3 28.6 267 180-453 15-316 (347)
156 1z68_A Fibroblast activation p 99.8 3.3E-19 1.1E-23 215.7 19.7 284 161-452 61-441 (719)
157 3o4h_A Acylamino-acid-releasin 99.8 2.3E-18 7.7E-23 203.0 24.2 225 160-403 65-314 (582)
158 3scy_A Hypothetical bacterial 99.8 4.6E-17 1.6E-21 179.3 31.6 275 172-454 14-337 (361)
159 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.1E-17 3.8E-22 184.7 25.5 242 160-404 40-341 (365)
160 1z68_A Fibroblast activation p 99.8 1.2E-18 4.1E-23 210.8 19.3 274 164-453 20-390 (719)
161 1q7f_A NHL, brain tumor CG1071 99.8 7.9E-16 2.7E-20 163.4 34.9 252 144-404 14-280 (286)
162 3pe7_A Oligogalacturonate lyas 99.8 3.2E-17 1.1E-21 182.3 24.4 275 165-452 41-380 (388)
163 1jof_A Carboxy-CIS,CIS-muconat 99.7 2.9E-16 1E-20 173.3 27.1 275 174-454 5-341 (365)
164 3fvz_A Peptidyl-glycine alpha- 99.7 2.3E-15 7.7E-20 163.6 30.4 239 160-404 24-322 (329)
165 4a5s_A Dipeptidyl peptidase 4 99.7 3.5E-16 1.2E-20 189.6 25.0 237 162-404 19-353 (740)
166 3azo_A Aminopeptidase; POP fam 99.7 5.9E-16 2E-20 185.2 24.9 244 157-404 21-323 (662)
167 3c5m_A Oligogalacturonate lyas 99.7 2.8E-16 9.7E-21 174.7 20.2 281 160-451 36-379 (396)
168 4a5s_A Dipeptidyl peptidase 4 99.7 8.2E-16 2.8E-20 186.3 25.8 275 163-442 65-435 (740)
169 1jmx_B Amine dehydrogenase; ox 99.7 6.9E-16 2.4E-20 168.3 22.8 232 205-454 4-325 (349)
170 2gop_A Trilobed protease; beta 99.7 5.8E-15 2E-19 161.2 28.3 260 161-452 16-329 (347)
171 2xdw_A Prolyl endopeptidase; a 99.7 1.8E-14 6.1E-19 173.7 32.4 243 158-405 123-415 (710)
172 2dg1_A DRP35, lactonase; beta 99.7 6.2E-15 2.1E-19 160.1 25.1 271 161-441 7-298 (333)
173 3e5z_A Putative gluconolactona 99.7 2.4E-14 8.1E-19 152.8 29.1 231 160-402 28-284 (296)
174 2gop_A Trilobed protease; beta 99.7 7.4E-15 2.5E-19 160.4 25.0 223 160-403 59-330 (347)
175 3pe7_A Oligogalacturonate lyas 99.7 6.4E-15 2.2E-19 163.5 23.6 259 189-454 19-329 (388)
176 3azo_A Aminopeptidase; POP fam 99.7 5.1E-15 1.7E-19 177.1 24.2 233 164-403 81-366 (662)
177 2dg1_A DRP35, lactonase; beta 99.6 2.4E-13 8.1E-18 147.5 34.3 233 158-394 43-300 (333)
178 1rwi_B Serine/threonine-protei 99.6 6.1E-14 2.1E-18 147.1 27.8 237 161-404 25-264 (270)
179 3c5m_A Oligogalacturonate lyas 99.6 2.2E-15 7.6E-20 167.5 16.7 231 164-403 85-381 (396)
180 2z2n_A Virginiamycin B lyase; 99.6 1.5E-12 5.3E-17 138.2 36.5 274 159-451 14-292 (299)
181 1q7f_A NHL, brain tumor CG1071 99.6 4.3E-13 1.5E-17 142.1 28.3 240 198-453 27-279 (286)
182 2bkl_A Prolyl endopeptidase; m 99.6 5.9E-14 2E-18 168.7 24.3 243 158-405 119-398 (695)
183 1qks_A Cytochrome CD1 nitrite 99.6 1.8E-12 6E-17 150.2 34.8 281 170-454 166-477 (567)
184 3fvz_A Peptidyl-glycine alpha- 99.6 4.2E-13 1.4E-17 145.6 27.1 244 200-453 23-321 (329)
185 2oiz_A Aromatic amine dehydrog 99.6 2.7E-13 9.1E-18 149.1 24.6 232 164-404 54-334 (361)
186 2xdw_A Prolyl endopeptidase; a 99.6 8.7E-13 3E-17 158.9 31.4 247 199-454 123-414 (710)
187 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.7E-12 5.7E-17 139.3 29.2 237 161-405 19-300 (314)
188 2z2n_A Virginiamycin B lyase; 99.5 2.9E-11 1E-15 128.2 38.4 236 159-404 56-295 (299)
189 1yr2_A Prolyl oligopeptidase; 99.5 2.4E-13 8.3E-18 164.5 24.4 241 160-404 163-441 (741)
190 3no2_A Uncharacterized protein 99.5 3.5E-12 1.2E-16 134.4 28.5 214 169-392 3-231 (276)
191 1qks_A Cytochrome CD1 nitrite 99.5 1.1E-11 3.8E-16 143.5 35.0 289 158-454 195-538 (567)
192 2qc5_A Streptogramin B lactona 99.5 2.6E-11 8.8E-16 128.7 35.4 268 159-441 19-290 (300)
193 3e5z_A Putative gluconolactona 99.5 1.8E-12 6.3E-17 138.0 26.2 231 191-441 18-275 (296)
194 2bkl_A Prolyl endopeptidase; m 99.5 7.4E-13 2.5E-17 159.1 24.9 247 198-454 118-397 (695)
195 3dsm_A Uncharacterized protein 99.5 5.3E-12 1.8E-16 136.8 29.1 259 179-453 15-301 (328)
196 3dsm_A Uncharacterized protein 99.5 3.3E-12 1.1E-16 138.4 26.6 232 160-403 44-301 (328)
197 2oiz_A Aromatic amine dehydrog 99.5 1.8E-12 6.1E-17 142.5 23.6 266 170-454 14-334 (361)
198 3hrp_A Uncharacterized protein 99.5 1.4E-11 4.9E-16 137.5 30.1 236 160-402 131-408 (409)
199 1rwi_B Serine/threonine-protei 99.5 5.6E-12 1.9E-16 132.0 24.8 240 202-455 25-265 (270)
200 2qc5_A Streptogramin B lactona 99.4 3.6E-10 1.2E-14 119.9 35.9 234 159-402 61-298 (300)
201 3g4e_A Regucalcin; six bladed 99.4 4.4E-11 1.5E-15 127.5 28.5 225 162-393 15-261 (297)
202 1yr2_A Prolyl oligopeptidase; 99.4 9E-12 3.1E-16 150.7 26.0 247 199-454 161-441 (741)
203 3iuj_A Prolyl endopeptidase; h 99.4 2.9E-11 1E-15 144.9 27.5 242 158-404 127-405 (693)
204 3no2_A Uncharacterized protein 99.4 4.2E-11 1.4E-15 126.0 23.7 218 211-441 4-231 (276)
205 2ghs_A AGR_C_1268P; regucalcin 99.4 4.1E-10 1.4E-14 121.7 30.7 224 162-394 51-292 (326)
206 1xip_A Nucleoporin NUP159; bet 99.4 1.5E-11 5.1E-16 134.3 19.0 173 202-392 39-232 (388)
207 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 2.6E-10 9E-15 122.0 28.7 242 197-453 14-298 (314)
208 3dr2_A Exported gluconolactona 99.4 1.5E-10 5.3E-15 123.8 26.5 228 160-397 45-300 (305)
209 2mad_H Methylamine dehydrogena 99.3 8E-10 2.7E-14 121.5 32.2 232 164-405 70-351 (373)
210 1xip_A Nucleoporin NUP159; bet 99.3 1.7E-11 5.9E-16 133.7 17.4 166 161-342 39-226 (388)
211 3sjl_D Methylamine dehydrogena 99.3 4.9E-10 1.7E-14 121.7 25.0 234 164-405 82-364 (386)
212 2qe8_A Uncharacterized protein 99.3 2.1E-10 7.2E-15 125.0 22.4 239 160-401 17-318 (343)
213 2mad_H Methylamine dehydrogena 99.3 5.2E-09 1.8E-13 115.0 33.3 267 168-454 29-350 (373)
214 3sjl_D Methylamine dehydrogena 99.3 1.1E-09 3.8E-14 118.9 26.4 271 167-454 40-363 (386)
215 3hrp_A Uncharacterized protein 99.2 1.8E-09 6E-14 120.5 26.4 240 201-450 131-406 (409)
216 3g4e_A Regucalcin; six bladed 99.2 2.9E-09 9.8E-14 113.3 27.0 230 198-442 10-261 (297)
217 3c75_H MADH, methylamine dehyd 99.2 1.1E-09 3.8E-14 121.2 23.0 234 164-405 122-403 (426)
218 3iuj_A Prolyl endopeptidase; h 99.2 7.4E-10 2.5E-14 132.7 21.6 242 199-453 127-404 (693)
219 2ghs_A AGR_C_1268P; regucalcin 99.1 1.8E-08 6.2E-13 108.7 28.9 220 203-441 51-290 (326)
220 3c75_H MADH, methylamine dehyd 99.1 1.1E-08 3.9E-13 113.1 24.4 268 170-455 83-403 (426)
221 2ece_A 462AA long hypothetical 99.0 2.2E-08 7.4E-13 109.4 22.5 223 166-392 88-399 (462)
222 3dr2_A Exported gluconolactona 99.0 3.3E-08 1.1E-12 105.5 23.6 232 191-441 35-295 (305)
223 2qe8_A Uncharacterized protein 99.0 3.6E-08 1.2E-12 107.1 22.3 229 201-441 17-309 (343)
224 2hz6_A Endoplasmic reticulum t 99.0 2.7E-10 9.4E-15 125.3 4.6 203 170-386 8-216 (369)
225 1mda_H Methylamine dehydrogena 98.9 3.1E-08 1.1E-12 107.7 19.6 214 182-405 47-347 (368)
226 3hxj_A Pyrrolo-quinoline quino 98.9 1.2E-07 4E-12 102.0 23.5 218 171-404 107-324 (330)
227 2ece_A 462AA long hypothetical 98.9 7.3E-07 2.5E-11 97.4 29.2 231 207-441 88-399 (462)
228 1npe_A Nidogen, entactin; glyc 98.9 1.4E-06 4.8E-11 90.7 29.1 223 173-404 3-238 (267)
229 2iwa_A Glutamine cyclotransfer 98.8 3.9E-07 1.3E-11 93.7 22.7 193 162-362 23-238 (266)
230 2hz6_A Endoplasmic reticulum t 98.8 6.3E-10 2.2E-14 122.4 1.7 182 211-406 8-194 (369)
231 2fp8_A Strictosidine synthase; 98.8 1.1E-06 3.7E-11 94.4 27.2 237 162-404 21-313 (322)
232 3hxj_A Pyrrolo-quinoline quino 98.8 1E-07 3.5E-12 102.5 19.0 222 161-402 61-282 (330)
233 1npe_A Nidogen, entactin; glyc 98.8 3.2E-06 1.1E-10 88.0 29.9 219 161-386 37-263 (267)
234 1fwx_A Nitrous oxide reductase 98.8 7.9E-08 2.7E-12 108.7 17.6 220 170-393 100-407 (595)
235 1fwx_A Nitrous oxide reductase 98.8 1.9E-07 6.5E-12 105.6 19.8 228 211-442 100-407 (595)
236 1yiq_A Quinohemoprotein alcoho 98.8 3.1E-07 1E-11 109.3 22.6 233 171-408 121-509 (689)
237 1mda_H Methylamine dehydrogena 98.8 2.5E-07 8.4E-12 100.6 19.3 215 223-455 47-347 (368)
238 1kb0_A Quinohemoprotein alcoho 98.7 4.4E-07 1.5E-11 107.7 22.7 232 170-407 127-510 (677)
239 2iwa_A Glutamine cyclotransfer 98.7 2E-06 6.7E-11 88.5 24.1 194 202-404 22-237 (266)
240 2p4o_A Hypothetical protein; p 98.7 1.3E-05 4.6E-10 85.1 29.6 226 161-395 33-279 (306)
241 3nol_A Glutamine cyclotransfer 98.7 1.7E-06 5.7E-11 87.8 21.0 180 162-349 45-244 (262)
242 1kb0_A Quinohemoprotein alcoho 98.7 9.6E-07 3.3E-11 104.8 22.4 191 171-368 77-353 (677)
243 1yiq_A Quinohemoprotein alcoho 98.6 1.2E-06 4.2E-11 104.1 22.5 193 171-368 70-345 (689)
244 3nol_A Glutamine cyclotransfer 98.6 4.3E-06 1.5E-10 84.8 22.4 184 198-393 38-244 (262)
245 3q7m_A Lipoprotein YFGL, BAMB; 98.6 7E-06 2.4E-10 90.0 26.3 222 170-405 102-338 (376)
246 2xe4_A Oligopeptidase B; hydro 98.6 3.1E-06 1.1E-10 101.9 25.4 238 161-404 175-458 (751)
247 3q7m_A Lipoprotein YFGL, BAMB; 98.6 1.7E-05 6E-10 86.8 29.2 219 171-406 53-298 (376)
248 4a2l_A BT_4663, two-component 98.6 0.0001 3.5E-09 89.5 37.7 274 162-452 175-478 (795)
249 3v64_C Agrin; beta propeller, 98.5 6.8E-05 2.3E-09 81.2 30.4 234 161-402 35-273 (349)
250 3nok_A Glutaminyl cyclase; bet 98.5 7.1E-06 2.4E-10 83.2 20.8 178 202-392 56-253 (268)
251 4a2l_A BT_4663, two-component 98.5 0.0002 6.7E-09 87.0 37.7 229 160-404 357-614 (795)
252 3nok_A Glutaminyl cyclase; bet 98.5 7.9E-06 2.7E-10 82.9 20.4 178 162-349 57-254 (268)
253 3v65_B Low-density lipoprotein 98.5 6.7E-05 2.3E-09 82.5 29.8 232 164-402 81-316 (386)
254 1ijq_A LDL receptor, low-densi 98.5 0.00022 7.6E-09 76.0 32.5 225 174-404 4-238 (316)
255 3mbr_X Glutamine cyclotransfer 98.5 2.7E-05 9.1E-10 78.4 23.4 183 160-350 21-224 (243)
256 3mbr_X Glutamine cyclotransfer 98.5 3E-05 1E-09 77.9 23.5 185 198-393 16-223 (243)
257 4hw6_A Hypothetical protein, I 98.5 4.4E-05 1.5E-09 85.3 27.4 238 160-403 139-432 (433)
258 2fp8_A Strictosidine synthase; 98.5 4.6E-05 1.6E-09 81.5 26.6 193 202-402 20-267 (322)
259 3tc9_A Hypothetical hydrolase; 98.4 4E-05 1.4E-09 85.6 26.4 238 160-403 137-429 (430)
260 3qqz_A Putative uncharacterize 98.4 0.00012 4.2E-09 74.6 27.2 202 195-401 21-250 (255)
261 1k3i_A Galactose oxidase precu 98.4 1.2E-05 4.2E-10 95.2 21.3 239 164-404 190-497 (656)
262 3p5b_L Low density lipoprotein 98.4 0.00048 1.7E-08 75.9 32.8 227 173-404 85-320 (400)
263 2p4o_A Hypothetical protein; p 98.4 6.5E-05 2.2E-09 79.7 24.2 229 201-441 32-276 (306)
264 1kv9_A Type II quinohemoprotei 98.3 1E-05 3.5E-10 95.8 19.5 232 171-407 117-491 (668)
265 2xe4_A Oligopeptidase B; hydro 98.3 1.6E-05 5.4E-10 95.8 20.8 196 202-402 175-396 (751)
266 2ad6_A Methanol dehydrogenase 98.2 4E-05 1.4E-09 88.9 20.7 232 171-407 115-497 (571)
267 3v9f_A Two-component system se 98.2 0.001 3.4E-08 80.5 33.8 265 160-440 313-600 (781)
268 3qqz_A Putative uncharacterize 98.2 0.00041 1.4E-08 70.7 25.5 195 160-358 27-250 (255)
269 3v9f_A Two-component system se 98.2 0.0021 7.1E-08 77.7 35.0 267 160-441 211-513 (781)
270 1ijq_A LDL receptor, low-densi 98.2 0.004 1.4E-07 66.1 33.1 205 159-368 29-245 (316)
271 1kv9_A Type II quinohemoprotei 98.1 0.00019 6.6E-09 84.9 24.6 190 171-367 66-339 (668)
272 1w6s_A Methanol dehydrogenase 98.1 7.4E-05 2.5E-09 86.6 20.3 232 174-410 124-509 (599)
273 3p5b_L Low density lipoprotein 98.1 0.0017 5.8E-08 71.5 30.4 208 158-368 110-327 (400)
274 3v65_B Low-density lipoprotein 98.1 0.00073 2.5E-08 74.2 26.9 207 159-368 115-325 (386)
275 3sov_A LRP-6, low-density lipo 98.1 0.0012 4.3E-08 70.1 27.6 220 180-404 12-238 (318)
276 3m0c_C LDL receptor, low-densi 98.1 0.0022 7.5E-08 76.6 32.4 225 173-403 397-631 (791)
277 3kya_A Putative phosphatase; s 98.1 0.00098 3.3E-08 74.5 27.4 238 161-404 140-475 (496)
278 2xbg_A YCF48-like protein; pho 98.1 0.0072 2.5E-07 64.4 33.6 269 160-450 36-318 (327)
279 3v64_C Agrin; beta propeller, 98.1 0.0012 4.1E-08 71.3 27.5 205 160-368 73-282 (349)
280 3tc9_A Hypothetical hydrolase; 98.1 0.00041 1.4E-08 77.3 24.1 156 202-361 138-301 (430)
281 2ad6_A Methanol dehydrogenase 98.0 0.00024 8.3E-09 82.3 22.2 179 206-389 240-522 (571)
282 4hw6_A Hypothetical protein, I 98.0 0.00067 2.3E-08 75.6 23.6 198 202-402 140-372 (433)
283 3sov_A LRP-6, low-density lipo 98.0 0.0028 9.7E-08 67.3 27.3 203 161-368 36-245 (318)
284 2xbg_A YCF48-like protein; pho 98.0 0.0082 2.8E-07 64.0 31.1 229 159-402 79-320 (327)
285 3m0c_C LDL receptor, low-densi 98.0 0.0022 7.5E-08 76.6 28.7 208 158-368 422-639 (791)
286 2p9w_A MAL S 1 allergenic prot 97.9 0.0022 7.6E-08 67.1 24.0 196 163-361 16-265 (334)
287 1w6s_A Methanol dehydrogenase 97.9 0.0023 7.8E-08 74.1 26.7 193 171-368 62-349 (599)
288 1flg_A Protein (quinoprotein e 97.9 0.0011 3.9E-08 76.7 24.1 235 171-410 117-522 (582)
289 1n7d_A LDL receptor, low-densi 97.9 6.4E-05 2.2E-09 89.3 13.7 220 180-403 385-613 (699)
290 1flg_A Protein (quinoprotein e 97.9 0.0059 2E-07 70.7 29.8 154 212-368 117-362 (582)
291 2ism_A Putative oxidoreductase 97.8 0.0046 1.6E-07 66.7 26.4 224 161-392 32-333 (352)
292 2p9w_A MAL S 1 allergenic prot 97.8 0.0019 6.4E-08 67.7 21.7 202 197-403 9-264 (334)
293 2xzh_A Clathrin heavy chain 1; 97.8 0.035 1.2E-06 57.5 30.4 235 164-404 71-332 (365)
294 3a9g_A Putative uncharacterize 97.8 0.013 4.4E-07 63.2 29.0 228 161-392 30-330 (354)
295 3amr_A 3-phytase; beta-propell 97.8 0.0029 1E-07 66.8 22.7 194 170-368 39-271 (355)
296 1k3i_A Galactose oxidase precu 97.8 0.00033 1.1E-08 82.9 17.0 229 162-393 245-530 (656)
297 4a0p_A LRP6, LRP-6, low-densit 97.7 0.03 1E-06 65.3 32.2 224 173-404 8-237 (628)
298 3amr_A 3-phytase; beta-propell 97.7 0.0072 2.5E-07 63.9 23.8 187 211-403 39-262 (355)
299 4a0p_A LRP6, LRP-6, low-densit 97.7 0.14 4.7E-06 59.7 37.3 281 160-452 123-506 (628)
300 1bpo_A Protein (clathrin); cla 97.7 0.1 3.5E-06 56.2 32.8 236 163-404 69-331 (494)
301 2ism_A Putative oxidoreductase 97.6 0.0094 3.2E-07 64.3 24.2 232 201-442 31-334 (352)
302 1n7d_A LDL receptor, low-densi 97.6 0.00016 5.3E-09 85.9 10.8 203 160-368 406-621 (699)
303 2g8s_A Glucose/sorbosone dehyd 97.6 0.02 6.8E-07 61.7 26.5 231 161-392 19-341 (353)
304 3kya_A Putative phosphatase; s 97.6 0.019 6.4E-07 64.2 26.3 199 203-402 141-408 (496)
305 3s94_A LRP-6, low-density lipo 97.5 0.018 6.3E-07 67.0 26.9 221 179-404 16-243 (619)
306 3das_A Putative oxidoreductase 97.5 0.13 4.6E-06 54.6 31.1 230 160-392 32-326 (347)
307 2xzh_A Clathrin heavy chain 1; 97.4 0.14 4.9E-06 53.0 28.4 216 181-406 49-292 (365)
308 1cru_A Protein (soluble quinop 97.3 0.1 3.4E-06 58.2 28.8 102 161-262 28-163 (454)
309 3s94_A LRP-6, low-density lipo 97.3 0.034 1.2E-06 64.7 25.4 205 159-366 39-248 (619)
310 3a9g_A Putative uncharacterize 97.2 0.06 2.1E-06 57.9 24.8 232 201-441 29-330 (354)
311 1bpo_A Protein (clathrin); cla 97.2 0.39 1.3E-05 51.8 31.5 218 181-408 48-293 (494)
312 2vpj_A Kelch-like protein 12; 97.1 0.016 5.5E-07 60.7 18.7 212 181-404 31-278 (301)
313 3sre_A PON1, serum paraoxonase 97.1 0.029 1E-06 60.0 20.4 176 179-359 81-296 (355)
314 3sre_A PON1, serum paraoxonase 97.1 0.034 1.2E-06 59.4 20.9 202 193-400 42-294 (355)
315 3ii7_A Kelch-like protein 7; p 97.0 0.036 1.2E-06 58.1 19.6 220 173-404 14-272 (306)
316 3ei3_A DNA damage-binding prot 96.9 0.68 2.3E-05 57.7 32.8 239 159-403 553-872 (1158)
317 3pbp_A Nucleoporin NUP82; beta 96.8 0.066 2.3E-06 57.7 19.5 144 209-357 29-208 (452)
318 2xn4_A Kelch-like protein 2; s 96.8 0.037 1.3E-06 57.9 17.9 212 181-404 30-276 (302)
319 3ott_A Two-component system se 96.7 1.4 4.9E-05 52.4 33.5 225 159-404 21-260 (758)
320 3s25_A Hypothetical 7-bladed b 96.7 0.098 3.3E-06 54.7 20.3 210 169-403 23-252 (302)
321 3pbp_A Nucleoporin NUP82; beta 96.7 0.14 4.7E-06 55.2 20.8 144 253-400 31-208 (452)
322 4asc_A Kelch repeat and BTB do 96.7 0.13 4.3E-06 54.2 21.0 208 174-394 8-253 (315)
323 2g8s_A Glucose/sorbosone dehyd 96.6 0.18 6.3E-06 54.0 22.2 231 202-440 19-340 (353)
324 1tl2_A L10, protein (tachylect 96.6 0.055 1.9E-06 52.8 15.7 178 212-404 4-208 (236)
325 3das_A Putative oxidoreductase 96.6 0.65 2.2E-05 49.3 25.8 235 199-442 30-327 (347)
326 1zgk_A Kelch-like ECH-associat 96.3 0.12 4.3E-06 54.0 17.7 222 170-403 24-286 (308)
327 1xi4_A Clathrin heavy chain; a 96.2 0.42 1.4E-05 59.2 23.1 232 165-404 71-331 (1630)
328 2woz_A Kelch repeat and BTB do 96.0 0.23 8E-06 52.1 18.5 173 182-363 25-233 (318)
329 3ott_A Two-component system se 96.0 3.7 0.00013 48.8 36.2 226 161-403 104-351 (758)
330 3sbq_A Nitrous-oxide reductase 96.0 0.67 2.3E-05 51.5 21.6 227 211-440 141-452 (638)
331 1tl2_A L10, protein (tachylect 96.0 0.057 1.9E-06 52.7 11.7 145 161-317 42-208 (236)
332 3ei3_A DNA damage-binding prot 95.9 1.7 5.9E-05 54.1 28.2 215 172-393 524-756 (1158)
333 3ii7_A Kelch-like protein 7; p 95.9 0.18 6.1E-06 52.7 16.5 183 170-363 55-274 (306)
334 3s25_A Hypothetical 7-bladed b 95.8 0.85 2.9E-05 47.5 21.2 139 166-317 110-255 (302)
335 2vpj_A Kelch-like protein 12; 95.8 0.19 6.6E-06 52.2 16.4 183 170-363 62-280 (301)
336 2xn4_A Kelch-like protein 2; s 95.5 0.25 8.5E-06 51.4 15.8 183 170-363 61-278 (302)
337 3sbq_A Nitrous-oxide reductase 95.4 4 0.00014 45.5 25.0 220 170-393 141-454 (638)
338 1xi4_A Clathrin heavy chain; a 95.4 0.5 1.7E-05 58.6 19.5 221 181-411 48-296 (1630)
339 4asc_A Kelch repeat and BTB do 95.2 0.33 1.1E-05 50.9 15.6 144 169-317 44-221 (315)
340 1cru_A Protein (soluble quinop 95.1 1.3 4.3E-05 49.2 20.7 105 201-305 27-162 (454)
341 2uvk_A YJHT; unknown function, 95.1 0.43 1.5E-05 51.0 16.4 91 170-263 19-128 (357)
342 2woz_A Kelch repeat and BTB do 94.8 0.6 2.1E-05 48.9 16.5 145 168-317 54-231 (318)
343 3qhy_B Beta-lactamase inhibito 94.7 1.3 4.4E-05 45.6 18.2 206 180-405 41-247 (282)
344 3b7f_A Glycosyl hydrolase, BNR 94.6 4.8 0.00016 43.4 23.6 232 159-398 54-366 (394)
345 2wg3_C Hedgehog-interacting pr 94.4 7.6 0.00026 42.9 30.3 230 161-392 15-354 (463)
346 3qhy_B Beta-lactamase inhibito 94.2 3.8 0.00013 42.0 20.3 188 201-408 24-211 (282)
347 2be1_A Serine/threonine-protei 94.1 1.1 3.9E-05 47.2 16.1 189 172-366 11-236 (339)
348 2zwa_A Leucine carboxyl methyl 94.0 1.5 5E-05 51.7 18.7 193 169-365 396-639 (695)
349 1zgk_A Kelch-like ECH-associat 93.7 1 3.6E-05 46.8 15.3 183 170-363 70-289 (308)
350 3b7f_A Glycosyl hydrolase, BNR 93.5 9.5 0.00033 40.9 29.4 211 172-391 23-296 (394)
351 2uvk_A YJHT; unknown function, 93.4 0.65 2.2E-05 49.5 13.4 143 222-369 168-350 (357)
352 2wg3_C Hedgehog-interacting pr 92.6 15 0.00051 40.5 25.4 105 202-306 15-158 (463)
353 1suu_A DNA gyrase subunit A; t 91.8 14 0.00046 38.4 25.1 227 169-403 6-282 (312)
354 4hvt_A Ritya.17583.B, post-pro 91.7 23 0.00078 41.4 24.3 235 162-403 131-429 (711)
355 3q6k_A 43.2 kDa salivary prote 91.4 17 0.00059 38.7 23.7 168 223-392 124-342 (381)
356 2zwa_A Leucine carboxyl methyl 91.1 2.4 8.1E-05 49.9 15.3 191 210-404 396-635 (695)
357 3uc1_A DNA gyrase subunit A; D 90.4 19 0.00065 37.6 23.8 196 159-360 41-278 (327)
358 3kci_A Probable E3 ubiquitin-p 89.4 25 0.00087 37.6 30.3 228 172-408 63-349 (389)
359 3kci_A Probable E3 ubiquitin-p 88.8 28 0.00095 37.2 26.3 225 172-405 11-294 (389)
360 1suu_A DNA gyrase subunit A; t 87.5 29 0.00098 35.9 24.4 190 210-405 6-232 (312)
361 3no0_A DNA gyrase subunit A; D 86.5 30 0.001 35.0 22.0 197 200-404 23-246 (276)
362 3l6v_A GYRA, DNA gyrase subuni 86.1 38 0.0013 35.9 25.2 231 168-403 4-315 (370)
363 2be1_A Serine/threonine-protei 84.8 2.8 9.5E-05 44.2 9.2 144 255-401 11-181 (339)
364 3uc1_A DNA gyrase subunit A; D 83.9 44 0.0015 34.8 24.4 227 172-404 4-279 (327)
365 1wp5_A Topoisomerase IV; broke 83.5 45 0.0015 34.6 24.9 231 169-404 3-277 (323)
366 4hvt_A Ritya.17583.B, post-pro 83.2 34 0.0012 39.9 18.5 196 204-403 132-380 (711)
367 3no0_A DNA gyrase subunit A; D 81.3 49 0.0017 33.4 22.0 195 160-360 24-245 (276)
368 1sqj_A OXG-RCBH, oligoxylogluc 81.0 96 0.0033 36.7 27.7 146 159-307 14-190 (789)
369 4d9s_A UVB-resistance protein 80.7 65 0.0022 34.5 33.0 193 202-407 69-308 (406)
370 1zi0_A DNA gyrase subunit A; b 79.2 61 0.0021 33.3 24.7 189 211-405 2-227 (307)
371 1zi0_A DNA gyrase subunit A; b 76.6 72 0.0025 32.7 26.2 228 170-404 2-277 (307)
372 3q6k_A 43.2 kDa salivary prote 74.6 92 0.0032 33.0 21.5 132 182-317 124-306 (381)
373 3l6v_A GYRA, DNA gyrase subuni 74.4 92 0.0031 32.9 25.1 191 209-405 4-266 (370)
374 1wp5_A Topoisomerase IV; broke 73.3 90 0.0031 32.3 24.2 189 210-404 3-225 (323)
375 3mvd_K Regulator of chromosome 72.8 1.1E+02 0.0036 32.9 37.0 233 161-408 76-378 (423)
376 4gq2_M Nucleoporin NUP120; bet 68.7 78 0.0027 38.4 16.7 37 244-282 237-273 (950)
377 1sqj_A OXG-RCBH, oligoxylogluc 64.7 2.2E+02 0.0076 33.5 23.0 147 200-351 14-190 (789)
378 2cn3_A Xyloglucanase, beta-1,4 63.1 2.3E+02 0.0077 33.0 27.2 103 161-263 24-153 (737)
379 3mvd_K Regulator of chromosome 58.9 1.9E+02 0.0065 30.8 31.7 190 202-405 76-323 (423)
380 4gq2_M Nucleoporin NUP120; bet 53.6 3.6E+02 0.012 32.4 26.8 37 331-368 237-273 (950)
381 4fhn_B Nucleoporin NUP120; pro 52.3 2.3E+02 0.008 34.9 17.2 37 288-325 239-275 (1139)
382 1zvt_A Topoisomerase IV subuni 48.3 2.1E+02 0.0073 28.2 13.7 140 173-317 4-163 (256)
383 3zwu_A Alkaline phosphatase PH 42.4 2.5E+02 0.0085 31.7 13.7 59 332-391 478-548 (592)
384 1zvt_A Topoisomerase IV subuni 39.2 2.9E+02 0.01 27.2 12.6 104 300-405 4-115 (256)
385 2cn3_A Xyloglucanase, beta-1,4 38.2 5.2E+02 0.018 29.8 23.9 59 202-261 24-91 (737)
386 3a0f_A Xyloglucanase; beta-pro 37.6 5.5E+02 0.019 29.9 21.0 238 162-410 397-668 (763)
387 4fhn_B Nucleoporin NUP120; pro 35.8 95 0.0033 38.5 9.9 38 244-283 239-276 (1139)
388 4d9s_A UVB-resistance protein 35.0 4.3E+02 0.015 27.9 32.2 193 202-407 122-360 (406)
389 4ftd_A Uncharacterized protein 32.1 5E+02 0.017 27.8 18.0 218 141-364 118-380 (453)
390 4a9v_A PHOX; hydrolase, beta-p 29.6 1.6E+02 0.0055 33.0 9.2 61 331-392 477-549 (592)
391 4a9v_A PHOX; hydrolase, beta-p 28.0 1.9E+02 0.0066 32.3 9.5 60 160-219 476-549 (592)
392 3f7f_A Nucleoporin NUP120; nuc 27.8 73 0.0025 36.8 6.3 37 202-240 223-259 (729)
393 3zwu_A Alkaline phosphatase PH 24.4 1.7E+02 0.0059 33.0 8.5 58 203-260 478-548 (592)
394 3f7f_A Nucleoporin NUP120; nuc 21.4 99 0.0034 35.7 5.7 37 244-284 223-259 (729)
395 3a0f_A Xyloglucanase; beta-pro 20.3 1E+03 0.035 27.4 28.6 148 158-308 19-203 (763)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-38 Score=359.45 Aligned_cols=286 Identities=24% Similarity=0.436 Sum_probs=260.5
Q ss_pred eeeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCe
Q psy13969 155 RLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCT 233 (877)
Q Consensus 155 ~l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~ 233 (877)
+.+|...|++++|+|++.+|++++.|++|+|||+.+. .+..+..|...|++|+|++++++|++++.|++|+|||+.+.+
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~ 183 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE 183 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 3479999999999999999999999999999997664 567889999999999999999999999999999999999999
Q ss_pred eeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEE
Q psy13969 234 EEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVF 313 (877)
Q Consensus 234 ~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iw 313 (877)
++..+.+|...|.+++|+|++++|++++.|+. |++||++++.++..+..|...|.+++|++++.+|++++.|++|+||
T Consensus 184 ~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~--i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vw 261 (410)
T 1vyh_C 184 CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKT--IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261 (410)
T ss_dssp EEECCCCCSSCEEEEEECSSSSEEEEEETTSE--EEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe--EEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEE
Confidence 99999999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred EcCCCCcceEEEecCCCCeEEEEEcCCC-------------------CcEEEEEeCCCcEEEEEcCCCceeEEecCcCCC
Q psy13969 314 DIRNLSSEVQTFRGHKKEASAVAWHPQH-------------------EGLFSSGGADGSIMFWHVGADKEVGCIPQAHDN 374 (877)
Q Consensus 314 d~~~~~~~~~~~~~h~~~v~~i~~~p~~-------------------~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~ 374 (877)
|+++ ......+..|...|.+++|+|+. ..+|++++.|++|+|||++++.++..+ ..|..
T Consensus 262 d~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~-~~h~~ 339 (410)
T 1vyh_C 262 VVAT-KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL-VGHDN 339 (410)
T ss_dssp ETTT-CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEE-ECCSS
T ss_pred ECCC-CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEE-ECCCC
Confidence 9988 56778899999999999999963 238999999999999999999988887 68999
Q ss_pred CEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCC
Q psy13969 375 IIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPS 452 (877)
Q Consensus 375 ~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~ 452 (877)
.|++++|++++++|++++.|++|+|||+.... . ...+..|...|.+++|+++..++++++ .|+.+++|+.
T Consensus 340 ~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~-~------~~~~~~h~~~v~~l~~~~~~~~l~sgs-~D~~i~vW~~ 409 (410)
T 1vyh_C 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKR-C------MKTLNAHEHFVTSLDFHKTAPYVVTGS-VDQTVKVWEC 409 (410)
T ss_dssp CEEEEEECSSSSCEEEEETTTEEEEECCTTSC-C------CEEEECCSSCEEEEEECSSSSCEEEEE-TTSEEEEEC-
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-e------EEEEcCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEeC
Confidence 99999999999999999999999999986532 1 122345666799999999999999875 7999999975
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.5e-38 Score=343.12 Aligned_cols=283 Identities=19% Similarity=0.384 Sum_probs=254.8
Q ss_pred eccCCEEEEEEcCC----CCEEEEEeCCCeEEEEeCCCcc---eEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEec
Q psy13969 157 AHDCAVRHMVWSHN----GLWMVTSDHQGYIKYWQSNMNN---VKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDF 229 (877)
Q Consensus 157 ~h~~~V~~l~~spd----~~~l~sg~~dg~v~iwd~~~~~---~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~ 229 (877)
+|...|++|+|+++ +.+|++++.|++|+||++.... ...+.+|...|.+++|++++.+|++++.|++|+|||+
T Consensus 30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~ 109 (321)
T 3ow8_A 30 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDL 109 (321)
T ss_dssp SSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred cCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 68999999999874 5799999999999999976543 3468899999999999999999999999999999999
Q ss_pred cCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCe
Q psy13969 230 YRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHL 309 (877)
Q Consensus 230 ~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~ 309 (877)
.+++.+..+..|...+.+++|+|++++|++++.|+. |++||+++++....+..|...|.+++|+|++++|++++.|+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~--v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~ 187 (321)
T 3ow8_A 110 ENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGK--VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 187 (321)
T ss_dssp TTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSE--EEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCc--EEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCe
Confidence 999999999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEE
Q psy13969 310 LKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILA 389 (877)
Q Consensus 310 I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~ 389 (877)
|+|||+++ ...+..+..|...|++++|+|++. +|++++.|++|+|||+++.+.+..+ ..|...|++++|+|++.+|+
T Consensus 188 i~iwd~~~-~~~~~~~~~h~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~~~~~~~~-~~h~~~v~~~~~sp~~~~l~ 264 (321)
T 3ow8_A 188 INIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHANLAGTL-SGHASWVLNVAFCPDDTHFV 264 (321)
T ss_dssp EEEEETTT-TEEEEEECCCSSCCCEEEECTTSC-EEEEECTTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSEEE
T ss_pred EEEEECCC-CcEEEEEcccCCceeEEEEcCCCC-EEEEEcCCCeEEEEECCCcceeEEE-cCCCCceEEEEECCCCCEEE
Confidence 99999998 677888999999999999999988 8999999999999999998888877 78999999999999999999
Q ss_pred EEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCC
Q psy13969 390 TGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPS 452 (877)
Q Consensus 390 sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~ 452 (877)
+++.|++|+|||+.+.. . ...+..+...|.+++|++++..|+++ +.|+.+++|+.
T Consensus 265 s~s~D~~v~iwd~~~~~-~------~~~~~~h~~~v~~v~~s~~g~~l~s~-~~d~~i~vwd~ 319 (321)
T 3ow8_A 265 SSSSDKSVKVWDVGTRT-C------VHTFFDHQDQVWGVKYNGNGSKIVSV-GDDQEIHIYDC 319 (321)
T ss_dssp EEETTSCEEEEETTTTE-E------EEEECCCSSCEEEEEECTTSSEEEEE-ETTCCEEEEEC
T ss_pred EEeCCCcEEEEeCCCCE-E------EEEEcCCCCcEEEEEECCCCCEEEEE-eCCCeEEEEeC
Confidence 99999999999997532 1 12234556779999999999998886 47899999975
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.4e-38 Score=340.51 Aligned_cols=287 Identities=19% Similarity=0.324 Sum_probs=247.3
Q ss_pred eeeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCe
Q psy13969 155 RLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCT 233 (877)
Q Consensus 155 ~l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~ 233 (877)
+..|...|++|+|+|++++|++++.|++|+|||+.+. .+..+..|...|.+++|++++++|++++.|++|+|||+.+++
T Consensus 9 ~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~ 88 (304)
T 2ynn_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE 88 (304)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC
T ss_pred ecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCc
Confidence 3478999999999999999999999999999998764 567888999999999999999999999999999999999999
Q ss_pred eeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCC-ceeEEeccCCCCeeEEEEcc-CCCeEEEEeCCCeEE
Q psy13969 234 EEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG-QALATLHAHKSTVMDLAWNQ-NGNWLVTASRDHLLK 311 (877)
Q Consensus 234 ~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~-~~~~~~~~h~~~V~~l~~sp-~g~~l~s~s~Dg~I~ 311 (877)
.+..+..|...|++++|+|++.+|++++.|+. |++||+++. .....+..|...|.+++|+| ++.+|++++.|++|+
T Consensus 89 ~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~--v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~ 166 (304)
T 2ynn_A 89 KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT--VKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVK 166 (304)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSC--EEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEE
T ss_pred EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCe--EEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEE
Confidence 99999999999999999999999999999999 999999877 45567889999999999999 678999999999999
Q ss_pred EEEcCCCCcceEEEecCCCCeEEEEEcCCC-CcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEE
Q psy13969 312 VFDIRNLSSEVQTFRGHKKEASAVAWHPQH-EGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILAT 390 (877)
Q Consensus 312 iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~-~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~s 390 (877)
|||++...........|...|..++|++.. ..+|++++.|++|+|||+++.+++..+ ..|...|++++|+|++.+|++
T Consensus 167 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~s 245 (304)
T 2ynn_A 167 VWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL-EGHMSNVSFAVFHPTLPIIIS 245 (304)
T ss_dssp EEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEE-ECCSSCEEEEEECSSSSEEEE
T ss_pred EEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceee-CCCCCCEEEEEECCCCCEEEE
Confidence 999987544455555677899999998742 338999999999999999999998888 789999999999999999999
Q ss_pred EEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCe--EEeccCCCCeeeecCCC
Q psy13969 391 GSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSA--VIPGMGLEDEDSVFPSS 453 (877)
Q Consensus 391 g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~--l~~~~g~d~~~~~~~~~ 453 (877)
++.|++|+|||+.+.. .. ..+..+...+..+++.+++.. +++ +.++.+.+|...
T Consensus 246 ~s~Dg~i~iWd~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~as--g~~~g~~~~~~~ 301 (304)
T 2ynn_A 246 GSEDGTLKIWNSSTYK-VE------KTLNVGLERSWCIATHPTGRKNYIAS--GFDNGFTVLSLG 301 (304)
T ss_dssp EETTSCEEEEETTTCC-EE------EEECCSSSSEEEEEECTTCGGGCEEE--EETTEEEEEECC
T ss_pred EcCCCeEEEEECCCCc-ee------eeccCCCccEEEEEECCCCCceEEEE--ecCCceEEEEec
Confidence 9999999999987632 11 122334456788888887753 444 346666666554
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=339.83 Aligned_cols=241 Identities=22% Similarity=0.381 Sum_probs=213.5
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcc-e----EEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCC
Q psy13969 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNN-V----KTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRC 232 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~-~----~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~ 232 (877)
|...|++++|++|+ .|++++.|++|+|||+++.. + ..+.+|...|++|+|++++++|++++.|++|+|||+.++
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~ 159 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ 159 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred cCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 45679999999984 68899999999999977643 2 234589999999999999999999999999999999999
Q ss_pred eeeEEeccCCCCeEEEEEcCCC-CEEEEEecCCcccEEEEcCCCCceeEEec--cCCCCeeEEEEcc-CCCeEEEEeCCC
Q psy13969 233 TEEKVLRGHGADVKCVDWHPYK-SLIVSGSKDNQQPVKLWDPKAGQALATLH--AHKSTVMDLAWNQ-NGNWLVTASRDH 308 (877)
Q Consensus 233 ~~~~~l~~h~~~v~~v~~sp~~-~~l~sgs~dg~~~I~iwd~~~~~~~~~~~--~h~~~V~~l~~sp-~g~~l~s~s~Dg 308 (877)
+.+..+.+|...|++++|++++ .+|++++.|+. |++||+++++.+..+. .|...+++++|++ ++++|++++.|+
T Consensus 160 ~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 160 VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNR--ILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSC--EEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred cEEEEEcCcCCceEEEEecCCCCCceeeeccccc--cccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 9999999999999999999988 47899999999 9999999999888774 4566799999998 567889999999
Q ss_pred eEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCC-E
Q psy13969 309 LLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGH-I 387 (877)
Q Consensus 309 ~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~-~ 387 (877)
+|+|||+++ ..++.++..|...|++|+|+|++..+|++++.|++|+|||+.+.+.+. + ..|...|++|+|+|++. +
T Consensus 238 ~v~~wd~~~-~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~-~~H~~~V~~v~~sp~~~~l 314 (344)
T 4gqb_B 238 TVSLVDTKS-TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-S-QAHRDFVRDATWSPLNHSL 314 (344)
T ss_dssp EEEEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-E-CCCSSCEEEEEECSSSTTE
T ss_pred cEEEEECCC-CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-E-cCCCCCEEEEEEeCCCCeE
Confidence 999999998 678899999999999999999987789999999999999999887654 4 58999999999999985 7
Q ss_pred EEEEEcCCeEEEEeCCC
Q psy13969 388 LATGSNDHASKFWTRNR 404 (877)
Q Consensus 388 l~sg~~dg~v~iwd~~~ 404 (877)
|++++.|++|++|++..
T Consensus 315 las~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 315 LTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp EEEEETTSCEEEEECCC
T ss_pred EEEEcCCCeEEEEECCC
Confidence 78999999999999975
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4e-38 Score=345.74 Aligned_cols=284 Identities=16% Similarity=0.236 Sum_probs=237.5
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC------------cceEEEccCCCCeeEEEEcCCCCEEEEEECCCcE
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM------------NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTV 224 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~------------~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I 224 (877)
.|...|.+++|++|+++|++++ |.++++||... ........|...|++|+|+++ .+|++++.|++|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~l~~~s~dg~v 105 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE-RGILVASDSGAV 105 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT-TEEEEEETTSEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC-CeEEEEECCCEE
Confidence 4677799999999999999887 66777776211 122334456788999999997 478899999999
Q ss_pred EEEeccCCeeeEE----eccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCC-C
Q psy13969 225 RVWDFYRCTEEKV----LRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNG-N 299 (877)
Q Consensus 225 ~iwd~~~~~~~~~----l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g-~ 299 (877)
+|||+.+++.+.. +.+|...|++|+|+|++++|++++.|+. |++||+++++++..+.+|...|++++|++++ .
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~--i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~ 183 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDIC--IKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDS 183 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSC--EEEEETTTTEEEEEECCCSSCEEEEEECSSCTT
T ss_pred EEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCe--EEEEECCCCcEEEEEcCcCCceEEEEecCCCCC
Confidence 9999988765543 4479999999999999999999999999 9999999999999999999999999999987 4
Q ss_pred eEEEEeCCCeEEEEEcCCCCcceEEEe--cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEE
Q psy13969 300 WLVTASRDHLLKVFDIRNLSSEVQTFR--GHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIW 377 (877)
Q Consensus 300 ~l~s~s~Dg~I~iwd~~~~~~~~~~~~--~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~ 377 (877)
+|++++.|++|+|||+++ .+.+..+. .|...+++++|+|++..+|++++.|++|+|||+++.+++..+ ..|...|+
T Consensus 184 ~l~s~s~D~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~-~~h~~~v~ 261 (344)
T 4gqb_B 184 VFLSCSEDNRILLWDTRC-PKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSS-AVHSQCVT 261 (344)
T ss_dssp EEEEEETTSCEEEEETTS-SSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEE-ECCSSCEE
T ss_pred ceeeeccccccccccccc-cceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEE-cCCCCCEE
Confidence 789999999999999998 45555553 456679999999988889999999999999999999998888 68999999
Q ss_pred EEEEcCCC-CEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCC
Q psy13969 378 TMAWHPLG-HILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 378 ~v~~sp~g-~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~ 454 (877)
+|+|+|++ ++|++++.|++|+|||++.. +.+ .+..|...|.+++|++++..+++..+.|+.+++|...+
T Consensus 262 ~v~fsp~g~~~lasgs~D~~i~vwd~~~~-~~~-------~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 262 GLVFSPHSVPFLASLSEDCSLAVLDSSLS-ELF-------RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTTCC-EEE-------EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred EEEEccCCCeEEEEEeCCCeEEEEECCCC-cEE-------EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 99999998 68999999999999998753 111 23456778999999999987776667899999998765
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=7.7e-37 Score=335.52 Aligned_cols=283 Identities=21% Similarity=0.355 Sum_probs=251.0
Q ss_pred eeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-cceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCC--
Q psy13969 156 LAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRC-- 232 (877)
Q Consensus 156 l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~-~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~-- 232 (877)
.+|...|++++|++|+++|++++.|++|+|||... ..+..+..|...|.+++|++++++|++++.|+.|+|||+.+.
T Consensus 52 ~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~ 131 (340)
T 1got_B 52 RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREG 131 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSB
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCC
Confidence 46899999999999999999999999999999655 456778899999999999999999999999999999999764
Q ss_pred --eeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeE
Q psy13969 233 --TEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLL 310 (877)
Q Consensus 233 --~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I 310 (877)
.....+.+|...|.+++|++++ .|++++.|+. |++||+++++.+..+..|...|++++|+|++++|++++.|++|
T Consensus 132 ~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~--i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v 208 (340)
T 1got_B 132 NVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTT--CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASA 208 (340)
T ss_dssp SCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSC--EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred cceeEEEecCCCccEEEEEECCCC-cEEEEECCCc--EEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 3556788899999999999876 4889999998 9999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecC-cCCCCEEEEEEcCCCCEEE
Q psy13969 311 KVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ-AHDNIIWTMAWHPLGHILA 389 (877)
Q Consensus 311 ~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~h~~~V~~v~~sp~g~~l~ 389 (877)
+|||+++ ...+.++..|...|++++|+|++. +|++++.|++|+|||+++.+.+..+.. .+...|++++|+|++++|+
T Consensus 209 ~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 286 (340)
T 1got_B 209 KLWDVRE-GMCRQTFTGHESDINAICFFPNGN-AFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLL 286 (340)
T ss_dssp EEEETTT-CSEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEE
T ss_pred EEEECCC-CeeEEEEcCCcCCEEEEEEcCCCC-EEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEE
Confidence 9999998 577888999999999999999987 889999999999999999887776621 2345799999999999999
Q ss_pred EEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecC
Q psy13969 390 TGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFP 451 (877)
Q Consensus 390 sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~ 451 (877)
+++.|+.|++||+..... ...+..|...|.++.|++++.+|++++ .|+.+++|+
T Consensus 287 ~g~~d~~i~vwd~~~~~~-------~~~~~~h~~~v~~~~~s~dg~~l~s~s-~D~~i~iWd 340 (340)
T 1got_B 287 AGYDDFNCNVWDALKADR-------AGVLAGHDNRVSCLGVTDDGMAVATGS-WDSFLKIWN 340 (340)
T ss_dssp EEETTSEEEEEETTTCCE-------EEEEECCSSCEEEEEECTTSSCEEEEE-TTSCEEEEC
T ss_pred EECCCCeEEEEEcccCcE-------eeEeecCCCcEEEEEEcCCCCEEEEEc-CCccEEecC
Confidence 999999999999865321 122445667799999999999999875 789999995
No 7
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.3e-37 Score=337.53 Aligned_cols=295 Identities=21% Similarity=0.393 Sum_probs=245.4
Q ss_pred eccC-CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcce----EEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccC
Q psy13969 157 AHDC-AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNV----KTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYR 231 (877)
Q Consensus 157 ~h~~-~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~----~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~ 231 (877)
+|.. .|.+|+|+|++++||+++.|++|+||++..... ....+|...|++|+|+|++++|++++.|++|+|||+.+
T Consensus 13 ~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~ 92 (345)
T 3fm0_A 13 AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQ 92 (345)
T ss_dssp CSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECC
T ss_pred CCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccC
Confidence 5776 899999999999999999999999999876532 22368999999999999999999999999999999876
Q ss_pred C--eeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCc---eeEEeccCCCCeeEEEEccCCCeEEEEeC
Q psy13969 232 C--TEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQ---ALATLHAHKSTVMDLAWNQNGNWLVTASR 306 (877)
Q Consensus 232 ~--~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~---~~~~~~~h~~~V~~l~~sp~g~~l~s~s~ 306 (877)
. +.+..+.+|...|.+++|+|++++|++++.|+. |++||+++.. ++..+..|...|.+++|+|++.+|++++.
T Consensus 93 ~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~--v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~ 170 (345)
T 3fm0_A 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKS--VWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASY 170 (345)
T ss_dssp C-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC--EEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEET
T ss_pred CCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCe--EEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeC
Confidence 5 457788899999999999999999999999999 9999998753 46677889999999999999999999999
Q ss_pred CCeEEEEEcCCCC-cceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCC---------------ceeEEecC
Q psy13969 307 DHLLKVFDIRNLS-SEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGAD---------------KEVGCIPQ 370 (877)
Q Consensus 307 Dg~I~iwd~~~~~-~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~---------------~~~~~~~~ 370 (877)
|++|+|||++... ..+.++..|...|++|+|+|++. +|++++.|++|+|||+... +++..+..
T Consensus 171 d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~-~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (345)
T 3fm0_A 171 DDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQ-RLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSG 249 (345)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECS
T ss_pred CCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCC-EEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecC
Confidence 9999999998732 24567889999999999999988 8899999999999997322 22334434
Q ss_pred cCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccc--cCCcceeeeeeeeeeccCCCC-eEEeccCCCCee
Q psy13969 371 AHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYN--QKGLAHCITGVYNEEMELNDS-AVIPGMGLEDED 447 (877)
Q Consensus 371 ~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~d~~-~l~~~~g~d~~~ 447 (877)
.|...|++++|++++.+|++++.|+.|++|++..........+. ......|...|.+++|++++. .|+++ +.|+.+
T Consensus 250 ~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~-s~Dg~v 328 (345)
T 3fm0_A 250 FHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASC-SDDGEV 328 (345)
T ss_dssp SCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEE-ETTSCE
T ss_pred CCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEc-CCCCcE
Confidence 58899999999999999999999999999998754332211111 111234567799999999886 55554 589999
Q ss_pred eecCCCCc
Q psy13969 448 SVFPSSEP 455 (877)
Q Consensus 448 ~~~~~~~~ 455 (877)
++|+....
T Consensus 329 ~~W~~~~~ 336 (345)
T 3fm0_A 329 AFWKYQRP 336 (345)
T ss_dssp EEEEECC-
T ss_pred EEEEecCC
Confidence 99987653
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=328.45 Aligned_cols=242 Identities=23% Similarity=0.400 Sum_probs=229.2
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeee
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEE 235 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~ 235 (877)
+|...|.+++|++++.+|++++.|++|+|||+... .+..+..|...|.+++|+|++++|++++.|+.|++||+.+.+..
T Consensus 78 gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~ 157 (321)
T 3ow8_A 78 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE 157 (321)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEE
T ss_pred cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCcee
Confidence 58899999999999999999999999999998764 56778889999999999999999999999999999999999999
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEc
Q psy13969 236 KVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDI 315 (877)
Q Consensus 236 ~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~ 315 (877)
..+..|...|.+++|+|++++|++++.|+. |++||+++++.+..+..|...|++|+|+|++++|++++.|++|+|||+
T Consensus 158 ~~~~~~~~~v~~~~~spdg~~lasg~~dg~--i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~ 235 (321)
T 3ow8_A 158 YSLDTRGKFILSIAYSPDGKYLASGAIDGI--INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 235 (321)
T ss_dssp EEEECSSSCEEEEEECTTSSEEEEEETTSC--EEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEET
T ss_pred EEecCCCceEEEEEECCCCCEEEEEcCCCe--EEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEEC
Confidence 999999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCC
Q psy13969 316 RNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDH 395 (877)
Q Consensus 316 ~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg 395 (877)
+. ...+..+..|...|++++|+|++. +|++++.|++|+|||+.+.+++..+ ..|...|++++|++++.+|++++.|+
T Consensus 236 ~~-~~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~-~~h~~~v~~v~~s~~g~~l~s~~~d~ 312 (321)
T 3ow8_A 236 QH-ANLAGTLSGHASWVLNVAFCPDDT-HFVSSSSDKSVKVWDVGTRTCVHTF-FDHQDQVWGVKYNGNGSKIVSVGDDQ 312 (321)
T ss_dssp TT-CCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred CC-cceeEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCEEEEEE-cCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 87 567788999999999999999988 8899999999999999999999888 68999999999999999999999999
Q ss_pred eEEEEeCC
Q psy13969 396 ASKFWTRN 403 (877)
Q Consensus 396 ~v~iwd~~ 403 (877)
+|+|||+.
T Consensus 313 ~i~vwd~p 320 (321)
T 3ow8_A 313 EIHIYDCP 320 (321)
T ss_dssp CEEEEECC
T ss_pred eEEEEeCC
Confidence 99999973
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=8.2e-37 Score=344.38 Aligned_cols=260 Identities=23% Similarity=0.446 Sum_probs=241.2
Q ss_pred CccCCeEEEEEccCCcee------------------------eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ce
Q psy13969 139 KMRCPIFSMTWTPEGRRL------------------------AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NV 193 (877)
Q Consensus 139 ~~~~~i~~~~~sp~g~~l------------------------~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~ 193 (877)
.+...|++++|+|++.++ +|...|++|+|++++++|++++.|++|+|||+... .+
T Consensus 106 gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~ 185 (410)
T 1vyh_C 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECI 185 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEE
T ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Confidence 356778899999988776 38899999999999999999999999999998764 56
Q ss_pred EEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcC
Q psy13969 194 KTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDP 273 (877)
Q Consensus 194 ~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~ 273 (877)
..+..|...|++++|+|++++|++++.|++|++||+.++.++..+..|...|.+++|++++.+|++++.|+. |++||+
T Consensus 186 ~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~--v~vwd~ 263 (410)
T 1vyh_C 186 RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT--VRVWVV 263 (410)
T ss_dssp ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC--EEEEET
T ss_pred EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCe--EEEEEC
Confidence 778899999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCCceeEEeccCCCCeeEEEEccC--------------------CCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeE
Q psy13969 274 KAGQALATLHAHKSTVMDLAWNQN--------------------GNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEAS 333 (877)
Q Consensus 274 ~~~~~~~~~~~h~~~V~~l~~sp~--------------------g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~ 333 (877)
++.++...+..|...|.+++|+|+ +.+|++++.|++|+|||+++ ...+.++..|...|+
T Consensus 264 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~-~~~~~~~~~h~~~v~ 342 (410)
T 1vyh_C 264 ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVR 342 (410)
T ss_dssp TTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEE
T ss_pred CCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCC-CceEEEEECCCCcEE
Confidence 999999999999999999999996 67899999999999999998 677889999999999
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCC
Q psy13969 334 AVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRN 403 (877)
Q Consensus 334 ~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~ 403 (877)
+++|++++. +|++++.|++|+|||+.+.+++..+ ..|...|++++|++++.+|++++.|++|+||+++
T Consensus 343 ~v~~~~~g~-~l~s~s~D~~i~vwd~~~~~~~~~~-~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 343 GVLFHSGGK-FILSCADDKTLRVWDYKNKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEEECSSSS-CEEEEETTTEEEEECCTTSCCCEEE-ECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEEEcCCCC-EEEEEeCCCeEEEEECCCCceEEEE-cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 999999988 7889999999999999999888887 6899999999999999999999999999999863
No 10
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.5e-36 Score=333.76 Aligned_cols=261 Identities=17% Similarity=0.319 Sum_probs=223.8
Q ss_pred ccCCeEEEEEccCCceee----------------------------------ccCCEEEEEEcCCCCEEEEEeCCCeEEE
Q psy13969 140 MRCPIFSMTWTPEGRRLA----------------------------------HDCAVRHMVWSHNGLWMVTSDHQGYIKY 185 (877)
Q Consensus 140 ~~~~i~~~~~sp~g~~l~----------------------------------h~~~V~~l~~spd~~~l~sg~~dg~v~i 185 (877)
+...|.+++|||||++|+ |...|++|+|++++.+ ++++.|++|+|
T Consensus 41 H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~-l~~s~dg~v~l 119 (357)
T 4g56_B 41 MEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGI-LVASDSGAVEL 119 (357)
T ss_dssp CCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEE-EEEETTSCEEE
T ss_pred ccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCE-EEEECCCEEEE
Confidence 455677778888777662 6678999999999764 56778999999
Q ss_pred EeCCCcc-----eEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCC-EEEE
Q psy13969 186 WQSNMNN-----VKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKS-LIVS 259 (877)
Q Consensus 186 wd~~~~~-----~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~-~l~s 259 (877)
||+.... ......|...|++|+|+|++++|++++.|++|+|||+.+.+.+..+..|...|++++|++++. +|++
T Consensus 120 Wd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s 199 (357)
T 4g56_B 120 WEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLS 199 (357)
T ss_dssp C--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEE
T ss_pred eeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeee
Confidence 9976543 234568999999999999999999999999999999999999999999999999999999875 7899
Q ss_pred EecCCcccEEEEcCCCCceeEEe--ccCCCCeeEEEEccC-CCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEE
Q psy13969 260 GSKDNQQPVKLWDPKAGQALATL--HAHKSTVMDLAWNQN-GNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVA 336 (877)
Q Consensus 260 gs~dg~~~I~iwd~~~~~~~~~~--~~h~~~V~~l~~sp~-g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~ 336 (877)
++.|+. |++||+++++.+..+ ..|...|++|+|+|+ +.+|++++.|+.|+|||+++ ...+.++..|...|++|+
T Consensus 200 ~~~dg~--v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~-~~~~~~~~~~~~~v~~l~ 276 (357)
T 4g56_B 200 CGEDGR--ILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN-PDSAQTSAVHSQNITGLA 276 (357)
T ss_dssp EETTSC--EEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC-GGGCEEECCCSSCEEEEE
T ss_pred eccCCc--eEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCC-CcEeEEEeccceeEEEEE
Confidence 999998 999999998876654 456778999999996 56888999999999999998 678889999999999999
Q ss_pred EcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcC-CCCEEEEEEcCCeEEEEeCCCCC
Q psy13969 337 WHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHP-LGHILATGSNDHASKFWTRNRLG 406 (877)
Q Consensus 337 ~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp-~g~~l~sg~~dg~v~iwd~~~~~ 406 (877)
|+|++..+|++++.|++|+|||+++.+.+..+ .|...|++|+|+| ++.+|+|++.|++|++|++...+
T Consensus 277 ~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~--~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 277 YSYHSSPFLASISEDCTVAVLDADFSEVFRDL--SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp ECSSSSCCEEEEETTSCEEEECTTSCEEEEEC--CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred EcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC--CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 99998778999999999999999998877655 7999999999998 78999999999999999997643
No 11
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.8e-36 Score=329.88 Aligned_cols=285 Identities=22% Similarity=0.319 Sum_probs=251.1
Q ss_pred eeeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-cceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCC-
Q psy13969 155 RLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRC- 232 (877)
Q Consensus 155 ~l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~-~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~- 232 (877)
+.+|...|++|+|++++++||+++.|++|+|||... .....+..|...|.+++|+|++.+|++++.|+.|++|++...
T Consensus 60 l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~ 139 (354)
T 2pbi_B 60 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDK 139 (354)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCT
T ss_pred ecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccc
Confidence 447999999999999999999999999999999654 456678889999999999999999999999999999998543
Q ss_pred -----eeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEcc--CCCeEEEEe
Q psy13969 233 -----TEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQ--NGNWLVTAS 305 (877)
Q Consensus 233 -----~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp--~g~~l~s~s 305 (877)
.....+..|...|.+++|++++.+|++++.|+. |++||+++++.+..+..|...|.+++|++ ++++|++++
T Consensus 140 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~--v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs 217 (354)
T 2pbi_B 140 NENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGT--CALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGG 217 (354)
T ss_dssp TCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSE--EEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEE
T ss_pred cccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCc--EEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEe
Confidence 345667789999999999999999999999998 99999999999999999999999999987 568999999
Q ss_pred CCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecC-cCCCCEEEEEEcCC
Q psy13969 306 RDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ-AHDNIIWTMAWHPL 384 (877)
Q Consensus 306 ~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~h~~~V~~v~~sp~ 384 (877)
.|++|++||+++ ...+..+..|...|++++|+|++. +|++++.|++|+|||++....+..+.. .+...+++++|+++
T Consensus 218 ~Dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~ 295 (354)
T 2pbi_B 218 CDKKAMVWDMRS-GQCVQAFETHESDVNSVRYYPSGD-AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLS 295 (354)
T ss_dssp TTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred CCCeEEEEECCC-CcEEEEecCCCCCeEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCC
Confidence 999999999998 577888999999999999999987 899999999999999999887766522 23457999999999
Q ss_pred CCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecC
Q psy13969 385 GHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFP 451 (877)
Q Consensus 385 g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~ 451 (877)
+.+|++++.|++|+|||+.... .+ ..+..|...|.+++|++++.+|++++ .|+.+++|.
T Consensus 296 g~~l~~g~~d~~i~vwd~~~~~-~~------~~l~~h~~~v~~l~~spdg~~l~sgs-~D~~v~vW~ 354 (354)
T 2pbi_B 296 GRLLFAGYNDYTINVWDVLKGS-RV------SILFGHENRVSTLRVSPDGTAFCSGS-WDHTLRVWA 354 (354)
T ss_dssp SSEEEEEETTSCEEEEETTTCS-EE------EEECCCSSCEEEEEECTTSSCEEEEE-TTSEEEEEC
T ss_pred CCEEEEEECCCcEEEEECCCCc-eE------EEEECCCCcEEEEEECCCCCEEEEEc-CCCCEEecC
Confidence 9999999999999999986532 11 22345677899999999999999875 789999994
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6.1e-36 Score=325.23 Aligned_cols=291 Identities=22% Similarity=0.333 Sum_probs=248.0
Q ss_pred ceeeccCCEEEEEEcCCC-CEEEEEeCCCeEEEEeCCC------cceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEE
Q psy13969 154 RRLAHDCAVRHMVWSHNG-LWMVTSDHQGYIKYWQSNM------NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRV 226 (877)
Q Consensus 154 ~~l~h~~~V~~l~~spd~-~~l~sg~~dg~v~iwd~~~------~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~i 226 (877)
.+.+|...|++|+|++++ ++|++++.|++|++|++.. ..+..+.+|...|++++|++++++|++++.|++|+|
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~ 91 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRL 91 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEE
Confidence 345799999999999965 8999999999999999653 235678899999999999999999999999999999
Q ss_pred EeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccC------CCe
Q psy13969 227 WDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQN------GNW 300 (877)
Q Consensus 227 wd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~------g~~ 300 (877)
||+.+++.+..+.+|...|.+++|++++.+|++++.|+. |++||++ +..+..+..|...|.+++|+|. +.+
T Consensus 92 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~--i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 92 WDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKT--IKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSC--EEEEETT-SCEEEEECCCSSCEEEEEECCC------CCE
T ss_pred EECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCe--EEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccE
Confidence 999999999999999999999999999999999999999 9999996 4567888899999999999984 458
Q ss_pred EEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEE
Q psy13969 301 LVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMA 380 (877)
Q Consensus 301 l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~ 380 (877)
|++++.|++|++||++. ......+..|...|++++|+|++. +|++++.|++|+|||+.+.+.+..+ .+...|.+++
T Consensus 169 l~s~~~d~~i~~wd~~~-~~~~~~~~~h~~~v~~~~~sp~g~-~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~~v~~~~ 244 (319)
T 3frx_A 169 IISAGNDKMVKAWNLNQ-FQIEADFIGHNSNINTLTASPDGT-LIASAGKDGEIMLWNLAAKKAMYTL--SAQDEVFSLA 244 (319)
T ss_dssp EEEEETTSCEEEEETTT-TEEEEEECCCCSCEEEEEECTTSS-EEEEEETTCEEEEEETTTTEEEEEE--ECCSCEEEEE
T ss_pred EEEEeCCCEEEEEECCc-chhheeecCCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcEEEEe--cCCCcEEEEE
Confidence 99999999999999987 567778889999999999999988 8999999999999999999988877 3456899999
Q ss_pred EcCCCCEEEEEEcCCeEEEEeCCCCCCCccccccc-CCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCC
Q psy13969 381 WHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQ-KGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSS 453 (877)
Q Consensus 381 ~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~ 453 (877)
|+|++.+|++++. ..|++|+++............ .....+...+.+++|++|+.+|+++. .|+.+++|+..
T Consensus 245 ~sp~~~~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~-~Dg~i~vWd~~ 316 (319)
T 3frx_A 245 FSPNRYWLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY-TDNVIRVWQVM 316 (319)
T ss_dssp ECSSSSEEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE-TTSCEEEEEEE
T ss_pred EcCCCCEEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEee-cCceEEEEEEe
Confidence 9999999998875 469999986421110000000 01123345578999999999999875 78999999764
No 13
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.2e-35 Score=326.09 Aligned_cols=257 Identities=24% Similarity=0.402 Sum_probs=233.8
Q ss_pred CccCCeEEEEEccCCceee------------------------ccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc---
Q psy13969 139 KMRCPIFSMTWTPEGRRLA------------------------HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN--- 191 (877)
Q Consensus 139 ~~~~~i~~~~~sp~g~~l~------------------------h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~--- 191 (877)
.+...|++++|++++++|+ |...|.+++|++++++|++++.|+.|++|++...
T Consensus 53 gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~ 132 (340)
T 1got_B 53 GHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN 132 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBS
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCc
Confidence 4667899999999998772 7778999999999999999999999999997653
Q ss_pred --ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEE
Q psy13969 192 --NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVK 269 (877)
Q Consensus 192 --~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~ 269 (877)
....+..|...|.+++|++++ .|++++.|++|++||+.+++.+..+..|...|.+++|+|++++|++++.|+. |+
T Consensus 133 ~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~--v~ 209 (340)
T 1got_B 133 VRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDAS--AK 209 (340)
T ss_dssp CEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC--EE
T ss_pred ceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCc--EE
Confidence 345678999999999999765 5899999999999999999999999999999999999999999999999999 99
Q ss_pred EEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEec--CCCCeEEEEEcCCCCcEEEE
Q psy13969 270 LWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRG--HKKEASAVAWHPQHEGLFSS 347 (877)
Q Consensus 270 iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~--h~~~v~~i~~~p~~~~~l~s 347 (877)
+||+++++.+..+..|...|++|+|+|++++|++++.|++|+|||++. ...+..+.. +...|++++|+|++. +|++
T Consensus 210 ~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~ 287 (340)
T 1got_B 210 LWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA-DQELMTYSHDNIICGITSVSFSKSGR-LLLA 287 (340)
T ss_dssp EEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCTTCCSCEEEEEECTTSS-EEEE
T ss_pred EEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC-CcEEEEEccCCcccceEEEEECCCCC-EEEE
Confidence 999999999999999999999999999999999999999999999987 444555442 334799999999998 8899
Q ss_pred EeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEe
Q psy13969 348 GGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWT 401 (877)
Q Consensus 348 gs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd 401 (877)
++.|+.|+|||+.+.+.+..+ ..|...|++++|++++.+|++++.|++|+|||
T Consensus 288 g~~d~~i~vwd~~~~~~~~~~-~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 288 GYDDFNCNVWDALKADRAGVL-AGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ECCCCeEEEEEcccCcEeeEe-ecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999998888877 68999999999999999999999999999997
No 14
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.1e-36 Score=334.28 Aligned_cols=286 Identities=17% Similarity=0.235 Sum_probs=235.6
Q ss_pred eeccCCEEEEEEcCCCCEEEEEeC------CCeEEEEeCCCc-----ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcE
Q psy13969 156 LAHDCAVRHMVWSHNGLWMVTSDH------QGYIKYWQSNMN-----NVKTFQGHKESIRGISFSPSDSKFATCSDDGTV 224 (877)
Q Consensus 156 l~h~~~V~~l~~spd~~~l~sg~~------dg~v~iwd~~~~-----~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I 224 (877)
..|...|++|+||||+++||+++. |+.|++|+.... .......|...|++|+|++++ .|++++.|++|
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~-~~l~~s~dg~v 117 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK-GILVASDSGAV 117 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT-EEEEEETTSCE
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC-CEEEEECCCEE
Confidence 469999999999999999999997 778999986542 234556799999999999987 46678889999
Q ss_pred EEEeccCCeeeE----EeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCC-
Q psy13969 225 RVWDFYRCTEEK----VLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGN- 299 (877)
Q Consensus 225 ~iwd~~~~~~~~----~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~- 299 (877)
+|||+.+.+... .+..|...|++|+|+|++++|++++.|+. |++||+++++.+..+..|...|++|+|++++.
T Consensus 118 ~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~--v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~ 195 (357)
T 4g56_B 118 ELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFS--VKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDT 195 (357)
T ss_dssp EEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSC--EEEEETTTTEEEEEECCCSSCEEEEEECTTCSS
T ss_pred EEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCe--EEEEECCCCcEEEEEcCCCCCEEEEEEccCCCc
Confidence 999998776433 34479999999999999999999999999 99999999999999999999999999999774
Q ss_pred eEEEEeCCCeEEEEEcCCCCcceEE--EecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEE
Q psy13969 300 WLVTASRDHLLKVFDIRNLSSEVQT--FRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIW 377 (877)
Q Consensus 300 ~l~s~s~Dg~I~iwd~~~~~~~~~~--~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~ 377 (877)
+|++++.|++|+|||+++. ..+.. +..|...+++++|+|++..+|++++.|+.|+|||+++.+.+..+ ..|...|+
T Consensus 196 ~~~s~~~dg~v~~wd~~~~-~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~-~~~~~~v~ 273 (357)
T 4g56_B 196 IFLSCGEDGRILLWDTRKP-KPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTS-AVHSQNIT 273 (357)
T ss_dssp CEEEEETTSCEEECCTTSS-SCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEE-CCCSSCEE
T ss_pred eeeeeccCCceEEEECCCC-ceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEE-eccceeEE
Confidence 7899999999999999874 33333 34577789999999998889999999999999999999988887 78999999
Q ss_pred EEEEcCCC-CEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccC-CCCeEEeccCCCCeeeecCCCCc
Q psy13969 378 TMAWHPLG-HILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMEL-NDSAVIPGMGLEDEDSVFPSSEP 455 (877)
Q Consensus 378 ~v~~sp~g-~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-d~~~l~~~~g~d~~~~~~~~~~~ 455 (877)
+++|+|++ ++||+++.|++|+|||++.. ..+. ...|...|++++|++ ++.+|+++ +.|+.+++|+....
T Consensus 274 ~l~~sp~~~~~lasgs~D~~i~iwd~~~~-~~~~-------~~~H~~~V~~vafsP~d~~~l~s~-s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 274 GLAYSYHSSPFLASISEDCTVAVLDADFS-EVFR-------DLSHRDFVTGVAWSPLDHSKFTTV-GWDHKVLHHHLPSE 344 (357)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTTSC-EEEE-------ECCCSSCEEEEEECSSSTTEEEEE-ETTSCEEEEECC--
T ss_pred EEEEcCCCCCEEEEEeCCCEEEEEECCCC-cEeE-------ECCCCCCEEEEEEeCCCCCEEEEE-cCCCeEEEEECCCC
Confidence 99999987 68999999999999998753 2211 224667799999997 67777776 58999999987653
No 15
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.2e-35 Score=317.23 Aligned_cols=285 Identities=26% Similarity=0.429 Sum_probs=248.0
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-cceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeee
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEE 235 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~-~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~ 235 (877)
+|...|++++|+|++++|++++.|+.|+||+... .....+..|...|++++|++++++|++++.|+.|+|||+.+.+.+
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~ 100 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL 100 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred ccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEE
Confidence 6899999999999999999999999999999765 456678899999999999999999999999999999999999999
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEc
Q psy13969 236 KVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDI 315 (877)
Q Consensus 236 ~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~ 315 (877)
..+..|...|.+++|++++++|++++.|+. |++||+++++.+..+..|...|.+++|++++++|++++.|+.|++||+
T Consensus 101 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~--i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~ 178 (312)
T 4ery_A 101 KTLKGHSNYVFCCNFNPQSNLIVSGSFDES--VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 178 (312)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTSC--EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeCCCc--EEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 999999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceEEE-ecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCE---EEEEEcCCCCEEEEE
Q psy13969 316 RNLSSEVQTF-RGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNII---WTMAWHPLGHILATG 391 (877)
Q Consensus 316 ~~~~~~~~~~-~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V---~~v~~sp~g~~l~sg 391 (877)
++. ..+..+ ..+...+.+++|+|++. +|++++.|+.|+|||+.+.+.+..+ ..|...+ ......+++.+|+++
T Consensus 179 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~sg 255 (312)
T 4ery_A 179 ASG-QCLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDYSKGKCLKTY-TGHKNEKYCIFANFSVTGGKWIVSG 255 (312)
T ss_dssp TTC-CEEEEECCSSCCCEEEEEECTTSS-EEEEEETTTEEEEEETTTTEEEEEE-CSSCCSSSCCCEEEECSSSCEEEEC
T ss_pred CCC-ceeeEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCcEEEEE-EecCCceEEEEEEEEeCCCcEEEEE
Confidence 984 444444 45667899999999988 7889999999999999999888777 4555432 223334678899999
Q ss_pred EcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEecc-CCCCeeeecCCC
Q psy13969 392 SNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGM-GLEDEDSVFPSS 453 (877)
Q Consensus 392 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~-g~d~~~~~~~~~ 453 (877)
+.|+.|++||+.... . ...+..|...+..++|+++...+++++ ..|..+++|...
T Consensus 256 ~~dg~i~vwd~~~~~-~------~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 256 SEDNLVYIWNLQTKE-I------VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CTTSCEEEEETTTCC-E------EEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CCCCEEEEEECCCch-h------hhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 999999999997532 1 122345666789999999999999875 468999999753
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.4e-35 Score=350.10 Aligned_cols=306 Identities=16% Similarity=0.279 Sum_probs=254.1
Q ss_pred ccCCeEEEEEccCCcee--------------------------eccCCEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCc-
Q psy13969 140 MRCPIFSMTWTPEGRRL--------------------------AHDCAVRHMVWSHNGL-WMVTSDHQGYIKYWQSNMN- 191 (877)
Q Consensus 140 ~~~~i~~~~~sp~g~~l--------------------------~h~~~V~~l~~spd~~-~l~sg~~dg~v~iwd~~~~- 191 (877)
+...|.+++|+|+++++ +|...|++++|+|++. +|++++.|++|++||....
T Consensus 102 ~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~ 181 (611)
T 1nr0_A 102 FSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK 181 (611)
T ss_dssp SSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE
T ss_pred cCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe
Confidence 45679999999998765 3777899999999986 6999999999999997653
Q ss_pred ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEec-------cCCCCeEEEEEcCCCCEEEEEecCC
Q psy13969 192 NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLR-------GHGADVKCVDWHPYKSLIVSGSKDN 264 (877)
Q Consensus 192 ~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~-------~h~~~v~~v~~sp~~~~l~sgs~dg 264 (877)
.+..+..|...|++++|+|++++||+++.|++|+|||+.+++.+..+. .|...|.+++|+|++++|++++.|+
T Consensus 182 ~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~ 261 (611)
T 1nr0_A 182 FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK 261 (611)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS
T ss_pred EeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCC
Confidence 466789999999999999999999999999999999999988888874 7999999999999999999999999
Q ss_pred cccEEEEcCCCCceeE-------------------------------------------EeccCCCCeeEEEEccCCCeE
Q psy13969 265 QQPVKLWDPKAGQALA-------------------------------------------TLHAHKSTVMDLAWNQNGNWL 301 (877)
Q Consensus 265 ~~~I~iwd~~~~~~~~-------------------------------------------~~~~h~~~V~~l~~sp~g~~l 301 (877)
+ |++||+++++.+. .+.+|...|++|+|+|++++|
T Consensus 262 ~--v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l 339 (611)
T 1nr0_A 262 T--IKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTL 339 (611)
T ss_dssp E--EEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred e--EEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEE
Confidence 8 9999998776543 335788999999999999999
Q ss_pred EEEeCCCeEEEEEcCCCCcceEEE--------------------------------------------------------
Q psy13969 302 VTASRDHLLKVFDIRNLSSEVQTF-------------------------------------------------------- 325 (877)
Q Consensus 302 ~s~s~Dg~I~iwd~~~~~~~~~~~-------------------------------------------------------- 325 (877)
++++.|++|++||+.+.. ....+
T Consensus 340 ~s~s~D~~v~~Wd~~~~~-~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (611)
T 1nr0_A 340 FSADAEGHINSWDISTGI-SNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLA 418 (611)
T ss_dssp EEEETTSCEEEEETTTCC-EEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEE
T ss_pred EEEeCCCcEEEEECCCCc-eeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEE
Confidence 999999999999987521 10000
Q ss_pred --------------------------ecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEE
Q psy13969 326 --------------------------RGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTM 379 (877)
Q Consensus 326 --------------------------~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v 379 (877)
..|...+.+++|+|++. +|++++.|++|+|||+............|...|++|
T Consensus 419 ~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~-~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v 497 (611)
T 1nr0_A 419 VSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQ-FVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSV 497 (611)
T ss_dssp ECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSC-EEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEE
T ss_pred EeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCC-EEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEE
Confidence 01334578899999988 899999999999999987653221114799999999
Q ss_pred EEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCC
Q psy13969 380 AWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 380 ~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~ 454 (877)
+|+|++++|++++.|++|++|++........ ...+..|...|.+++|++|+.+|++++ .|+.+++|+...
T Consensus 498 ~fspdg~~las~s~d~~v~~w~~~~~~~~~~----~~~~~~H~~~V~~v~fspdg~~lasgs-~D~~v~lW~~~~ 567 (611)
T 1nr0_A 498 AFSNNGAFLVATDQSRKVIPYSVANNFELAH----TNSWTFHTAKVACVSWSPDNVRLATGS-LDNSVIVWNMNK 567 (611)
T ss_dssp EECTTSSEEEEEETTSCEEEEEGGGTTEESC----CCCCCCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTC
T ss_pred EECCCCCEEEEEcCCCCEEEEEcCCCCceee----eeeeeecccceeEEEECCCCCEEEEEE-CCCcEEEEECCC
Confidence 9999999999999999999999865222211 111223677899999999999999975 799999998764
No 17
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.1e-35 Score=321.70 Aligned_cols=246 Identities=29% Similarity=0.535 Sum_probs=213.1
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc---ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCC--
Q psy13969 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN---NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRC-- 232 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~---~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~-- 232 (877)
|...|++|+|+|++++|++++.|++|+||+++.. .+..+.+|...|++|+|+|++++|++++.|++|+|||+.+.
T Consensus 60 h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~ 139 (345)
T 3fm0_A 60 HQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE 139 (345)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC
T ss_pred cCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC
Confidence 7889999999999999999999999999997654 35678899999999999999999999999999999999765
Q ss_pred -eeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCc--eeEEeccCCCCeeEEEEccCCCeEEEEeCCCe
Q psy13969 233 -TEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQ--ALATLHAHKSTVMDLAWNQNGNWLVTASRDHL 309 (877)
Q Consensus 233 -~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~--~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~ 309 (877)
..+..+..|...|.+++|+|++.+|++++.|+. |++||+++.+ ++..+..|...|++|+|+|++++|++++.|++
T Consensus 140 ~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~--i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~ 217 (345)
T 3fm0_A 140 YECVSVLNSHTQDVKHVVWHPSQELLASASYDDT--VKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT 217 (345)
T ss_dssp EEEEEEECCCCSCEEEEEECSSSSCEEEEETTSC--EEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCc--EEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe
Confidence 345678889999999999999999999999999 9999998775 45678899999999999999999999999999
Q ss_pred EEEEEcCCCC--------------cceEEEec-CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCc--------eeE
Q psy13969 310 LKVFDIRNLS--------------SEVQTFRG-HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADK--------EVG 366 (877)
Q Consensus 310 I~iwd~~~~~--------------~~~~~~~~-h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~--------~~~ 366 (877)
|+|||+.... ..+.++.. |...|.+++|++++. +|++++.|+.|+||++.... ...
T Consensus 218 v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~ 296 (345)
T 3fm0_A 218 VRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG-ALATACGDDAIRVFQEDPNSDPQQPTFSLTA 296 (345)
T ss_dssp EEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTC-CEEEEETTSCEEEEEECTTSCTTSCCEEEEE
T ss_pred EEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCC-EEEEEeCCCeEEEEEeCCCCCcceeeEEEEe
Confidence 9999974321 12334444 888999999999988 78899999999999987542 122
Q ss_pred EecCcCCCCEEEEEEcCCC-CEEEEEEcCCeEEEEeCCCCC
Q psy13969 367 CIPQAHDNIIWTMAWHPLG-HILATGSNDHASKFWTRNRLG 406 (877)
Q Consensus 367 ~~~~~h~~~V~~v~~sp~g-~~l~sg~~dg~v~iwd~~~~~ 406 (877)
.+...|...|++|+|+|++ .+||+++.|++|+||++....
T Consensus 297 ~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 297 HLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp EETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC--
T ss_pred eecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCC
Confidence 3336899999999999997 599999999999999997643
No 18
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.2e-35 Score=323.51 Aligned_cols=258 Identities=26% Similarity=0.435 Sum_probs=234.2
Q ss_pred CccCCeEEEEEccCCceee------------------------ccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC----
Q psy13969 139 KMRCPIFSMTWTPEGRRLA------------------------HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM---- 190 (877)
Q Consensus 139 ~~~~~i~~~~~sp~g~~l~------------------------h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~---- 190 (877)
.+...|++++|+|++++|+ |...|.+++|+|++.+|++++.|+.|++|++..
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~ 141 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNE 141 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTC
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccc
Confidence 4667899999999998773 567799999999999999999999999998653
Q ss_pred ---cceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcC--CCCEEEEEecCCc
Q psy13969 191 ---NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHP--YKSLIVSGSKDNQ 265 (877)
Q Consensus 191 ---~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp--~~~~l~sgs~dg~ 265 (877)
.....+..|...|++++|++++.+|++++.|++|+|||+++++.+..+..|...|.+++|++ ++++|++++.|+.
T Consensus 142 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~ 221 (354)
T 2pbi_B 142 NMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKK 221 (354)
T ss_dssp CSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSC
T ss_pred cccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCe
Confidence 24567788999999999999999999999999999999999999999999999999999988 4689999999999
Q ss_pred ccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecC--CCCeEEEEEcCCCCc
Q psy13969 266 QPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGH--KKEASAVAWHPQHEG 343 (877)
Q Consensus 266 ~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h--~~~v~~i~~~p~~~~ 343 (877)
|++||+++++++..+..|...|++++|+|++.+|++++.|++|+|||++. ...+..+..+ ...+++++|++++.
T Consensus 222 --v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~- 297 (354)
T 2pbi_B 222 --AMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRA-DREVAIYSKESIIFGASSVDFSLSGR- 297 (354)
T ss_dssp --EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCTTCCSCEEEEEECTTSS-
T ss_pred --EEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCC-CcEEEEEcCCCcccceeEEEEeCCCC-
Confidence 99999999999999999999999999999999999999999999999987 4445555433 34789999999988
Q ss_pred EEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEe
Q psy13969 344 LFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWT 401 (877)
Q Consensus 344 ~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd 401 (877)
+|++++.|++|+|||+.+++.+..+ ..|...|++++|+|++++|++++.|++|+||+
T Consensus 298 ~l~~g~~d~~i~vwd~~~~~~~~~l-~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 298 LLFAGYNDYTINVWDVLKGSRVSIL-FGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEEETTSCEEEEETTTCSEEEEE-CCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEEECCCcEEEEECCCCceEEEE-ECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 8899999999999999999888877 68999999999999999999999999999996
No 19
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.1e-36 Score=335.13 Aligned_cols=292 Identities=19% Similarity=0.371 Sum_probs=251.1
Q ss_pred eeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-cceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCe-
Q psy13969 156 LAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCT- 233 (877)
Q Consensus 156 l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~-~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~- 233 (877)
.+|...|++++|+|++++|++++.|++|+|||..+ ..+..+..|...|.+++|+|++++|++++.|+.|+|||+.+..
T Consensus 63 ~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~ 142 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQAD 142 (380)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSS
T ss_pred cccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCcc
Confidence 47999999999999999999999999999999765 4567889999999999999999999999999999999986432
Q ss_pred ------eeEEeccCCCCeEEEEEcCCC-CEEEEEecCCcccEEEEcCCCCceeEEe-----ccCCCCeeEEEEcc-CCCe
Q psy13969 234 ------EEKVLRGHGADVKCVDWHPYK-SLIVSGSKDNQQPVKLWDPKAGQALATL-----HAHKSTVMDLAWNQ-NGNW 300 (877)
Q Consensus 234 ------~~~~l~~h~~~v~~v~~sp~~-~~l~sgs~dg~~~I~iwd~~~~~~~~~~-----~~h~~~V~~l~~sp-~g~~ 300 (877)
....+.+|...|.+++|+++. .+|++++.|+. |++||+++++.+..+ ..|...|.+++|++ ++++
T Consensus 143 ~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~--i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 220 (380)
T 3iz6_a 143 RDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQT--CVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANM 220 (380)
T ss_dssp CCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSC--EEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCE
T ss_pred ccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCc--EEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCE
Confidence 345678899999999999974 57999999999 999999999988877 67899999999987 8899
Q ss_pred EEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCc------CCC
Q psy13969 301 LVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQA------HDN 374 (877)
Q Consensus 301 l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~------h~~ 374 (877)
|++++.|++|+|||++.....+..+..|...|++|+|+|++. +|+|++.|++|+|||++++..+..+... +..
T Consensus 221 l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 299 (380)
T 3iz6_a 221 FISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELP 299 (380)
T ss_dssp EEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSC
T ss_pred EEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCCcEEEEecccccccccccC
Confidence 999999999999999865678889999999999999999988 8999999999999999999888776322 123
Q ss_pred CEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCC
Q psy13969 375 IIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 375 ~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~ 454 (877)
.|++++|++++++|++++.|+.|+|||+...... ... ......|...|.+++|++++.+|++++ .|+.+++|....
T Consensus 300 ~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~-~~~--~~~~~~h~~~v~~l~~s~dg~~l~sgs-~D~~i~iW~~~~ 375 (380)
T 3iz6_a 300 IVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMV-LNL--GTLQNSHEGRISCLGLSSDGSALCTGS-WDKNLKIWAFSG 375 (380)
T ss_dssp SCSEEEECSSSSEEEEECTTSCEEEEETTTCCEE-EEE--CCSCSSCCCCCCEEEECSSSSEEEEEC-TTSCEEEEECCS
T ss_pred ceEEEEECCCCCEEEEEECCCCEEEEECCCCceE-EEE--ecccCCCCCceEEEEECCCCCEEEEee-CCCCEEEEecCC
Confidence 4899999999999999999999999998653211 110 011134667799999999999999874 799999998654
No 20
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-35 Score=323.30 Aligned_cols=288 Identities=18% Similarity=0.287 Sum_probs=229.1
Q ss_pred eeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc---ceEEE-cc-CCCCeeEEEEcCCCCEEEEEECCCcEEEEecc
Q psy13969 156 LAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN---NVKTF-QG-HKESIRGISFSPSDSKFATCSDDGTVRVWDFY 230 (877)
Q Consensus 156 l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~---~~~~~-~~-h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~ 230 (877)
.+|...|++++|+++ +||+++.|++|+||++... .+..+ .. |...|++|+|+|++++|++++.|++|+|||+.
T Consensus 11 ~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~ 88 (330)
T 2hes_X 11 KLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKE 88 (330)
T ss_dssp ECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-
T ss_pred ccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcc
Confidence 468999999999988 9999999999999998763 33445 34 99999999999999999999999999999984
Q ss_pred C-------CeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCC----CceeEEeccCCCCeeEEEEccCCC
Q psy13969 231 R-------CTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKA----GQALATLHAHKSTVMDLAWNQNGN 299 (877)
Q Consensus 231 ~-------~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~----~~~~~~~~~h~~~V~~l~~sp~g~ 299 (877)
. .+.+..+.+|...|++++|+|++++|++++.|+. |++||++. .+++..+..|...|.+|+|+|++.
T Consensus 89 ~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~--v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 166 (330)
T 2hes_X 89 ESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKS--VWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA 166 (330)
T ss_dssp ------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSC--EEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS
T ss_pred cCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCE--EEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC
Confidence 3 3566778899999999999999999999999999 99999953 246778889999999999999999
Q ss_pred eEEEEeCCCeEEEEEcCCCC-cceEEEecCCCCeEEEEEcCCCC-cEEEEEeCCCcEEEEEcCCC--------ceeEEec
Q psy13969 300 WLVTASRDHLLKVFDIRNLS-SEVQTFRGHKKEASAVAWHPQHE-GLFSSGGADGSIMFWHVGAD--------KEVGCIP 369 (877)
Q Consensus 300 ~l~s~s~Dg~I~iwd~~~~~-~~~~~~~~h~~~v~~i~~~p~~~-~~l~sgs~dg~I~iwd~~~~--------~~~~~~~ 369 (877)
+|++++.|++|+|||++... .++..+..|...|.+++|+++.. .+|++++.|++|+|||+... ..+..+.
T Consensus 167 ~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~ 246 (330)
T 2hes_X 167 LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILP 246 (330)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECC
T ss_pred EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecc
Confidence 99999999999999987632 56788899999999999999842 37899999999999999654 3344443
Q ss_pred CcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeee-eeeeeeccC--CCCeEEeccCCCCe
Q psy13969 370 QAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCIT-GVYNEEMEL--NDSAVIPGMGLEDE 446 (877)
Q Consensus 370 ~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~--d~~~l~~~~g~d~~ 446 (877)
..|...|++++|++++ +|++++.|++|+||++....... . ......|.. .+..++|++ ++..|+++ +.|+.
T Consensus 247 ~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~--~--~~~~~~h~~~~v~~v~~~~~~~~~~las~-s~Dg~ 320 (330)
T 2hes_X 247 DVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKV--F--AKRALCHGVYEINVVKWLELNGKTILATG-GDDGI 320 (330)
T ss_dssp SCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEE--E--EEESCTTTTSCEEEEEEC-----CCEEEE-ETTSE
T ss_pred cccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEE--E--eccccccccceEEEEEEecCCCceEEEEe-cCCCc
Confidence 3489999999999664 89999999999999985421000 0 001112233 688889988 56777776 47999
Q ss_pred eeecCCC
Q psy13969 447 DSVFPSS 453 (877)
Q Consensus 447 ~~~~~~~ 453 (877)
+++|+..
T Consensus 321 v~~W~~~ 327 (330)
T 2hes_X 321 VNFWSLE 327 (330)
T ss_dssp EEEEEC-
T ss_pred EEEEEec
Confidence 9999764
No 21
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.3e-34 Score=318.15 Aligned_cols=290 Identities=17% Similarity=0.257 Sum_probs=240.3
Q ss_pred ceeeccCCEEEEEE-----cC-CCCEEEEEeCCCeEEEEeCCCc--------ceEEEccCCCCeeEEEEcCCCCEEEEEE
Q psy13969 154 RRLAHDCAVRHMVW-----SH-NGLWMVTSDHQGYIKYWQSNMN--------NVKTFQGHKESIRGISFSPSDSKFATCS 219 (877)
Q Consensus 154 ~~l~h~~~V~~l~~-----sp-d~~~l~sg~~dg~v~iwd~~~~--------~~~~~~~h~~~V~~i~~sp~~~~l~sgs 219 (877)
.+.+|...|++|+| ++ |+.+|++++.|++|+|||+... ....+.+|...|++++|++++.+|++++
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s 95 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSS 95 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEE
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEc
Confidence 34579999999999 77 8999999999999999997532 3467889999999999999999999999
Q ss_pred CCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEec---cCCCCeeEEEEcc
Q psy13969 220 DDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLH---AHKSTVMDLAWNQ 296 (877)
Q Consensus 220 ~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~---~h~~~V~~l~~sp 296 (877)
.|++|+|||+.+++.+..+..|...|.+++|+|++++|++++.|+. |++||+... ....+. .|...|.+++|+|
T Consensus 96 ~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~--i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~ 172 (343)
T 2xzm_R 96 WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAERE--IKLWNILGE-CKFSSAEKENHSDWVSCVRYSP 172 (343)
T ss_dssp TTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSC--EEEEESSSC-EEEECCTTTSCSSCEEEEEECC
T ss_pred CCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCE--EEEEeccCC-ceeeeecccCCCceeeeeeecc
Confidence 9999999999999999999999999999999999999999999999 999999843 333333 6889999999999
Q ss_pred CC----------CeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCC-cee
Q psy13969 297 NG----------NWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGAD-KEV 365 (877)
Q Consensus 297 ~g----------~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~-~~~ 365 (877)
++ .+|++++.|++|+|||.. ......+..|...|++++|+|++. +|++++.|+.|+|||+... ...
T Consensus 173 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g~-~l~sgs~dg~v~iwd~~~~~~~~ 249 (343)
T 2xzm_R 173 IMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLSISPNGK-YIATGGKDKKLLIWDILNLTYPQ 249 (343)
T ss_dssp CCCSCSCCCSSCCEEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEEECTTSS-EEEEEETTCEEEEEESSCCSSCS
T ss_pred ccccccccCCCCCEEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEEECCCCC-EEEEEcCCCeEEEEECCCCcccc
Confidence 86 789999999999999954 366778889999999999999988 8899999999999999543 333
Q ss_pred EEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccc------cCCcceeeeeeeeeeccCCCCeEEe
Q psy13969 366 GCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYN------QKGLAHCITGVYNEEMELNDSAVIP 439 (877)
Q Consensus 366 ~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~------~~~~~~~~~~v~~~~~~~d~~~l~~ 439 (877)
..+ .+...|++++|+|++.+|+++ .|+.|+||++............ ......+...+.+++|++++..|++
T Consensus 250 ~~~--~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s 326 (343)
T 2xzm_R 250 REF--DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFA 326 (343)
T ss_dssp EEE--ECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEE
T ss_pred eee--cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEE
Confidence 333 345679999999999887655 5888999999764322100110 0111245566899999999999998
Q ss_pred ccCCCCeeeecCCC
Q psy13969 440 GMGLEDEDSVFPSS 453 (877)
Q Consensus 440 ~~g~d~~~~~~~~~ 453 (877)
+. .|+.+++|+..
T Consensus 327 g~-~Dg~v~~w~~~ 339 (343)
T 2xzm_R 327 GF-TDGVIRTFSFE 339 (343)
T ss_dssp EE-TTSEEEEEEEE
T ss_pred ec-CCceEEEEEEE
Confidence 75 78999999754
No 22
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.4e-35 Score=347.11 Aligned_cols=242 Identities=20% Similarity=0.374 Sum_probs=215.9
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc---ceEEEccCCCCeeEEEEcCCCCEEEEEECC----CcEEEEec
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN---NVKTFQGHKESIRGISFSPSDSKFATCSDD----GTVRVWDF 229 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~---~~~~~~~h~~~V~~i~~sp~~~~l~sgs~D----g~I~iwd~ 229 (877)
.|...|++++|+||+++||+++.|++|+|||+... ....+..|...|++|+|+|++++|++++.+ ++|++||.
T Consensus 57 ~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~ 136 (611)
T 1nr0_A 57 EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT 136 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT
T ss_pred CCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC
Confidence 69999999999999999999999999999997532 345778999999999999999999999875 47888874
Q ss_pred cCCeeeEEeccCCCCeEEEEEcCCCC-EEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCC
Q psy13969 230 YRCTEEKVLRGHGADVKCVDWHPYKS-LIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDH 308 (877)
Q Consensus 230 ~~~~~~~~l~~h~~~v~~v~~sp~~~-~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg 308 (877)
++....+.+|...|++++|+|++. +|++++.|+. |++||..+.+.+..+..|...|++|+|+|++++||+++.|+
T Consensus 137 --~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~--v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~ 212 (611)
T 1nr0_A 137 --GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNT--VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDG 212 (611)
T ss_dssp --CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSC--EEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred --CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCe--EEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCC
Confidence 566778899999999999999986 6999999999 99999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCCCcceEEEe-------cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEe-------------
Q psy13969 309 LLKVFDIRNLSSEVQTFR-------GHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCI------------- 368 (877)
Q Consensus 309 ~I~iwd~~~~~~~~~~~~-------~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~------------- 368 (877)
+|+|||+.+ ...+..+. .|...|++++|+|++. +|++++.|++|+|||+.+.+.+..+
T Consensus 213 ~i~lwd~~~-g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~ 290 (611)
T 1nr0_A 213 TIVLYNGVD-GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGI 290 (611)
T ss_dssp CEEEEETTT-CCEEEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEE
T ss_pred cEEEEECCC-CcEeeeeccccccccccCCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEE
Confidence 999999987 45566663 7999999999999988 8899999999999999887654332
Q ss_pred -----------------------------cCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 369 -----------------------------PQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 369 -----------------------------~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
...|...|++++|+|++++|++++.|++|++||+..
T Consensus 291 ~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 291 IWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIST 355 (611)
T ss_dssp EECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC
Confidence 146889999999999999999999999999999875
No 23
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.1e-34 Score=342.13 Aligned_cols=294 Identities=26% Similarity=0.510 Sum_probs=264.4
Q ss_pred ccCCeEEEEEccCCcee-----------------------eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEE
Q psy13969 140 MRCPIFSMTWTPEGRRL-----------------------AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTF 196 (877)
Q Consensus 140 ~~~~i~~~~~sp~g~~l-----------------------~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~ 196 (877)
+...|.+++|+|+++.+ .|...|.+++|+|++++|++++.|+.|++|+.+...+..+
T Consensus 261 ~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~ 340 (577)
T 2ymu_A 261 HSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTL 340 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEE
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEE
Confidence 45678899999988776 3788999999999999999999999999999998889999
Q ss_pred ccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCC
Q psy13969 197 QGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG 276 (877)
Q Consensus 197 ~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~ 276 (877)
..|...|++++|+|++++|++++.|++|++||. +.+.+..+..|...|.+++|++++++|++++.|+. |++||. ++
T Consensus 341 ~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~--v~~~~~-~~ 416 (577)
T 2ymu_A 341 TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT--VKLWNR-NG 416 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSE--EEEECT-TC
T ss_pred eCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCE--EEEEeC-CC
Confidence 999999999999999999999999999999996 56788889999999999999999999999999998 999995 56
Q ss_pred ceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEE
Q psy13969 277 QALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMF 356 (877)
Q Consensus 277 ~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~i 356 (877)
+.+..+..|...|++++|+|++++|++++.|++|++||+.. ..+..+..|...|++++|+|++. +|++++.|++|+|
T Consensus 417 ~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~--~~~~~~~~~~~~v~~~~~spd~~-~las~~~d~~i~i 493 (577)
T 2ymu_A 417 QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKL 493 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS--CEEEEEECCSSCEEEEEECTTSC-EEEEEETTSEEEE
T ss_pred CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC--CEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCEEEE
Confidence 77888999999999999999999999999999999999753 67888999999999999999988 8899999999999
Q ss_pred EEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCe
Q psy13969 357 WHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSA 436 (877)
Q Consensus 357 wd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~ 436 (877)
||. +++.+..+ ..|...|++|+|+|++++||+++.|+.|+|||+. +.. ...+..|...|.+++|++|+.+
T Consensus 494 w~~-~~~~~~~~-~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~--~~~------~~~~~~h~~~v~~~~fs~dg~~ 563 (577)
T 2ymu_A 494 WNR-NGQLLQTL-TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--GQL------LQTLTGHSSSVWGVAFSPDGQT 563 (577)
T ss_dssp EET-TSCEEEEE-ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT--SCE------EEEEECCSSCEEEEEECTTSSC
T ss_pred EcC-CCCEEEEE-eCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC--CCE------EEEEcCCCCCEEEEEEcCCCCE
Confidence 996 56667666 6899999999999999999999999999999964 222 2234566778999999999999
Q ss_pred EEeccCCCCeeeecC
Q psy13969 437 VIPGMGLEDEDSVFP 451 (877)
Q Consensus 437 l~~~~g~d~~~~~~~ 451 (877)
|+++ +.|..+++|+
T Consensus 564 l~s~-~~D~~i~~Wd 577 (577)
T 2ymu_A 564 IASA-SSDKTVKLWN 577 (577)
T ss_dssp EEEE-ETTSCEEEEC
T ss_pred EEEE-eCCCEEEEeC
Confidence 9986 4789999995
No 24
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.2e-34 Score=322.61 Aligned_cols=283 Identities=22% Similarity=0.384 Sum_probs=236.0
Q ss_pred eeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcc-eEEEccCC------------------CCeeEEEEcCCCCEEE
Q psy13969 156 LAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNN-VKTFQGHK------------------ESIRGISFSPSDSKFA 216 (877)
Q Consensus 156 l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~-~~~~~~h~------------------~~V~~i~~sp~~~~l~ 216 (877)
+.|...|++++|+||+++||+++ ++.++||++.... +..+..|. ..|++++|++++++|+
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 46999999999999999999987 6899999976644 44444433 2499999999999999
Q ss_pred EEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEcc
Q psy13969 217 TCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQ 296 (877)
Q Consensus 217 sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp 296 (877)
+++.|++|+|||+.+.+.+..+.+|...|++++|+|++.+|++++.|+. |++||+++++.+..+. +...|.+++|++
T Consensus 140 s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~--v~iwd~~~~~~~~~~~-~~~~v~~~~~~~ 216 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT--VRIWDLRTGQCSLTLS-IEDGVTTVAVSP 216 (393)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE--EEEEETTTTEEEEEEE-CSSCEEEEEECS
T ss_pred EEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCc--EEEEECCCCeeEEEEE-cCCCcEEEEEEC
Confidence 9999999999999999999999999999999999999999999999998 9999999998877775 567899999999
Q ss_pred -CCCeEEEEeCCCeEEEEEcCCCCcceEEE-------ecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCc-----
Q psy13969 297 -NGNWLVTASRDHLLKVFDIRNLSSEVQTF-------RGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADK----- 363 (877)
Q Consensus 297 -~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~-------~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~----- 363 (877)
++++|++++.|++|+|||+++ ...+..+ ..|...|++++|++++. +|++++.|++|+|||+++..
T Consensus 217 ~~~~~l~~~s~d~~v~iwd~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~~ 294 (393)
T 1erj_A 217 GDGKYIAAGSLDRAVRVWDSET-GFLVERLDSENESGTGHKDSVYSVVFTRDGQ-SVVSGSLDRSVKLWNLQNANNKSDS 294 (393)
T ss_dssp TTCCEEEEEETTSCEEEEETTT-CCEEEEEC------CCCSSCEEEEEECTTSS-EEEEEETTSEEEEEEC---------
T ss_pred CCCCEEEEEcCCCcEEEEECCC-CcEEEeecccccCCCCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEECCCCCCcccc
Confidence 899999999999999999987 4445444 57999999999999988 88999999999999997632
Q ss_pred -------eeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccC----
Q psy13969 364 -------EVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMEL---- 432 (877)
Q Consensus 364 -------~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---- 432 (877)
+...+ ..|...|++++|++++.+|++++.|+.|++||+..... + ..+..|...|.+++|+.
T Consensus 295 ~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~-~------~~l~~h~~~v~~v~~~~~~~~ 366 (393)
T 1erj_A 295 KTPNSGTCEVTY-IGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP-L------LMLQGHRNSVISVAVANGSSL 366 (393)
T ss_dssp ------CEEEEE-ECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCE-E------EEEECCSSCEEEEEECSSCTT
T ss_pred cCCCCCcceEEE-ecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeE-E------EEECCCCCCEEEEEecCCcCc
Confidence 23333 57899999999999999999999999999999876422 1 12334556677777664
Q ss_pred --CCCeEEeccCCCCeeeecCCC
Q psy13969 433 --NDSAVIPGMGLEDEDSVFPSS 453 (877)
Q Consensus 433 --d~~~l~~~~g~d~~~~~~~~~ 453 (877)
+...++++ +.|..+++|+..
T Consensus 367 ~p~~~~l~sg-s~Dg~i~iW~~~ 388 (393)
T 1erj_A 367 GPEYNVFATG-SGDCKARIWKYK 388 (393)
T ss_dssp CTTCEEEEEE-ETTSEEEEEEEE
T ss_pred CCCCCEEEEE-CCCCcEEECccc
Confidence 56677776 479999999754
No 25
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.1e-34 Score=309.38 Aligned_cols=279 Identities=15% Similarity=0.291 Sum_probs=243.0
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc----ceEEEc--cCCCCeeEEEEcCCCCEEEEEECCCcEEEEecc
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN----NVKTFQ--GHKESIRGISFSPSDSKFATCSDDGTVRVWDFY 230 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~----~~~~~~--~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~ 230 (877)
.|...|++++|++++++|++++ |+.|++|++... .+..+. .|...|++++|++++++|++++.|+.|++||+.
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 127 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA 127 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC
T ss_pred cCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECC
Confidence 3889999999999999999999 999999997653 233333 799999999999999999999999999999998
Q ss_pred CCe--eeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCC
Q psy13969 231 RCT--EEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDH 308 (877)
Q Consensus 231 ~~~--~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg 308 (877)
+.+ ....+..|...|.+++|++++++|++++.|+. |++||+++.+.+..+..|...|.+++|++++++|++++.|+
T Consensus 128 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~--v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 205 (337)
T 1gxr_A 128 APTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN--IAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDN 205 (337)
T ss_dssp CC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSC--EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCc--EEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCC
Confidence 876 56677889999999999999999999999998 99999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEE
Q psy13969 309 LLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHIL 388 (877)
Q Consensus 309 ~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l 388 (877)
.|++||+++ ...+..+ .|...+.+++|+|++. +|++++.|+.|++||+.+.+... + ..|...|++++|++++++|
T Consensus 206 ~i~~~d~~~-~~~~~~~-~~~~~v~~~~~s~~~~-~l~~~~~~~~i~~~~~~~~~~~~-~-~~~~~~v~~~~~~~~~~~l 280 (337)
T 1gxr_A 206 TVRSWDLRE-GRQLQQH-DFTSQIFSLGYCPTGE-WLAVGMESSNVEVLHVNKPDKYQ-L-HLHESCVLSLKFAYCGKWF 280 (337)
T ss_dssp EEEEEETTT-TEEEEEE-ECSSCEEEEEECTTSS-EEEEEETTSCEEEEETTSSCEEE-E-CCCSSCEEEEEECTTSSEE
T ss_pred cEEEEECCC-CceEeee-cCCCceEEEEECCCCC-EEEEEcCCCcEEEEECCCCCeEE-E-cCCccceeEEEECCCCCEE
Confidence 999999987 4444444 4788999999999988 78899999999999999877553 3 5789999999999999999
Q ss_pred EEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCC
Q psy13969 389 ATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPS 452 (877)
Q Consensus 389 ~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~ 452 (877)
++++.|+.|++|++...... ....+...+.++.|++++..++++. .++.+++|+.
T Consensus 281 ~~~~~dg~i~~~~~~~~~~~--------~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iw~~ 335 (337)
T 1gxr_A 281 VSTGKDNLLNAWRTPYGASI--------FQSKESSSVLSCDISVDDKYIVTGS-GDKKATVYEV 335 (337)
T ss_dssp EEEETTSEEEEEETTTCCEE--------EEEECSSCEEEEEECTTSCEEEEEE-TTSCEEEEEE
T ss_pred EEecCCCcEEEEECCCCeEE--------EEecCCCcEEEEEECCCCCEEEEec-CCCeEEEEEE
Confidence 99999999999999764322 1123456688999999999988875 6889999864
No 26
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.8e-34 Score=308.69 Aligned_cols=246 Identities=23% Similarity=0.430 Sum_probs=214.4
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC---cceEEEccCCCCeeEEEEcCC--CCEEEEEECCCcEEEEeccC
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM---NNVKTFQGHKESIRGISFSPS--DSKFATCSDDGTVRVWDFYR 231 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~---~~~~~~~~h~~~V~~i~~sp~--~~~l~sgs~Dg~I~iwd~~~ 231 (877)
+|...|++++|++++++||+++.|++|+||+++. ..+.++.+|...|++|+|+++ +++|++++.|++|+|||+.+
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~ 86 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEEN 86 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSS
T ss_pred CCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCC
Confidence 6899999999999999999999999999999764 456789999999999999863 88999999999999999987
Q ss_pred Ce--eeEEeccCCCCeEEEEEcCC--CCEEEEEecCCcccEEEEcCCCCc--eeEEeccCCCCeeEEEEccC--------
Q psy13969 232 CT--EEKVLRGHGADVKCVDWHPY--KSLIVSGSKDNQQPVKLWDPKAGQ--ALATLHAHKSTVMDLAWNQN-------- 297 (877)
Q Consensus 232 ~~--~~~~l~~h~~~v~~v~~sp~--~~~l~sgs~dg~~~I~iwd~~~~~--~~~~~~~h~~~V~~l~~sp~-------- 297 (877)
++ .+..+..|...|.+++|+|+ +.+|++++.|+. |++||+++.. ....+..|...|.+++|+|+
T Consensus 87 ~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~--v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~ 164 (297)
T 2pm7_B 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGK--VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 164 (297)
T ss_dssp SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSE--EEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-------
T ss_pred CceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCc--EEEEEecCCCceeeeeeecccCccceEeecCCcccccccC
Confidence 63 56677889999999999997 789999999998 9999998763 24667889999999999996
Q ss_pred -----CCeEEEEeCCCeEEEEEcCCCCc---ceEEEecCCCCeEEEEEcCCC--CcEEEEEeCCCcEEEEEcCCCc--ee
Q psy13969 298 -----GNWLVTASRDHLLKVFDIRNLSS---EVQTFRGHKKEASAVAWHPQH--EGLFSSGGADGSIMFWHVGADK--EV 365 (877)
Q Consensus 298 -----g~~l~s~s~Dg~I~iwd~~~~~~---~~~~~~~h~~~v~~i~~~p~~--~~~l~sgs~dg~I~iwd~~~~~--~~ 365 (877)
+++|++++.|++|+|||++.... .+..+..|...|.+|+|+|++ ..+|++++.|++|+|||+.... ..
T Consensus 165 ~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~ 244 (297)
T 2pm7_B 165 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWK 244 (297)
T ss_dssp -----CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCE
T ss_pred CCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccc
Confidence 57999999999999999986332 456788999999999999986 4589999999999999997743 12
Q ss_pred EEec--CcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 366 GCIP--QAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 366 ~~~~--~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
..+. ..|...|++++|+|++++||+++.|++|+||+.+.
T Consensus 245 ~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 245 KTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred eeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 2222 46788999999999999999999999999999864
No 27
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.8e-34 Score=319.88 Aligned_cols=239 Identities=27% Similarity=0.487 Sum_probs=215.1
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEec
Q psy13969 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLR 239 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~ 239 (877)
.|++++|++|+++|++++.|++|+|||+... .+..+..|...|++++|++++++|++++.|++|+|||+.+++....+.
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE
Confidence 3899999999999999999999999998765 456788999999999999999999999999999999999988887776
Q ss_pred cCCCCeEEEEEcC-CCCEEEEEecCCcccEEEEcCCCCceeEEe-------ccCCCCeeEEEEccCCCeEEEEeCCCeEE
Q psy13969 240 GHGADVKCVDWHP-YKSLIVSGSKDNQQPVKLWDPKAGQALATL-------HAHKSTVMDLAWNQNGNWLVTASRDHLLK 311 (877)
Q Consensus 240 ~h~~~v~~v~~sp-~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~-------~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~ 311 (877)
+...|.+++|+| ++++|++++.|+. |++||+++++.+..+ ..|...|++|+|++++++|++++.|++|+
T Consensus 205 -~~~~v~~~~~~~~~~~~l~~~s~d~~--v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~ 281 (393)
T 1erj_A 205 -IEDGVTTVAVSPGDGKYIAAGSLDRA--VRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVK 281 (393)
T ss_dssp -CSSCEEEEEECSTTCCEEEEEETTSC--EEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred -cCCCcEEEEEECCCCCEEEEEcCCCc--EEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 667899999999 8899999999999 999999999887776 57899999999999999999999999999
Q ss_pred EEEcCCCC-----------cceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEE
Q psy13969 312 VFDIRNLS-----------SEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMA 380 (877)
Q Consensus 312 iwd~~~~~-----------~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~ 380 (877)
|||++... .....+..|...|.+++|++++. +|++++.|+.|+|||+.+++.+..+ ..|...|++++
T Consensus 282 ~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~iwd~~~~~~~~~l-~~h~~~v~~v~ 359 (393)
T 1erj_A 282 LWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE-YILSGSKDRGVLFWDKKSGNPLLML-QGHRNSVISVA 359 (393)
T ss_dssp EEEC---------------CEEEEEECCSSCEEEEEECGGGC-EEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEE
T ss_pred EEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCC-EEEEEeCCCeEEEEECCCCeEEEEE-CCCCCCEEEEE
Confidence 99997521 23557788999999999999988 8899999999999999999988877 68999999999
Q ss_pred EcC------CCCEEEEEEcCCeEEEEeCCC
Q psy13969 381 WHP------LGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 381 ~sp------~g~~l~sg~~dg~v~iwd~~~ 404 (877)
|++ ++.+|++++.|++|+||++..
T Consensus 360 ~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 360 VANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp ECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred ecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 986 678999999999999999854
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-34 Score=312.41 Aligned_cols=243 Identities=26% Similarity=0.472 Sum_probs=203.1
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC--------cceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEec
Q psy13969 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM--------NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDF 229 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~--------~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~ 229 (877)
|...|++|+|+|++++|++++.|++|+||++.. ..+..+.+|...|++|+|+|++++|++++.|++|+|||+
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 889999999999999999999999999999742 345678899999999999999999999999999999999
Q ss_pred cC----CeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCC--ceeEEeccCCCCeeEEEEccC--CCeE
Q psy13969 230 YR----CTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG--QALATLHAHKSTVMDLAWNQN--GNWL 301 (877)
Q Consensus 230 ~~----~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~--~~~~~~~~h~~~V~~l~~sp~--g~~l 301 (877)
.. .+.+..+..|...|.+++|+|++.+|++++.|+. |++||+.+. +++..+.+|...|.+++|+++ +.+|
T Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~--i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 214 (330)
T 2hes_X 137 DESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDT--VRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRL 214 (330)
T ss_dssp CTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSC--EEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEE
T ss_pred cCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCe--EEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEE
Confidence 43 2567788899999999999999999999999999 999998876 678889999999999999998 6789
Q ss_pred EEEeCCCeEEEEEcCCCC-------cceEEEec-CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCc--eeEEecCc
Q psy13969 302 VTASRDHLLKVFDIRNLS-------SEVQTFRG-HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADK--EVGCIPQA 371 (877)
Q Consensus 302 ~s~s~Dg~I~iwd~~~~~-------~~~~~~~~-h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~--~~~~~~~~ 371 (877)
++++.|++|+|||++... .....+.. |...|.+++|++++ +|++++.|++|+|||+.++. .+......
T Consensus 215 ~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~ 292 (330)
T 2hes_X 215 CSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVDGEWKVFAKRALC 292 (330)
T ss_dssp EEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEETTEEEEEEEESCT
T ss_pred EEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCCCceEEEeccccc
Confidence 999999999999987521 23334444 89999999999654 68999999999999998763 33334356
Q ss_pred CCC-CEEEEEEcC--CCCEEEEEEcCCeEEEEeCCC
Q psy13969 372 HDN-IIWTMAWHP--LGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 372 h~~-~V~~v~~sp--~g~~l~sg~~dg~v~iwd~~~ 404 (877)
|.. .|++++|++ ++++|++++.|++|+||+++.
T Consensus 293 h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 293 HGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred cccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 776 899999999 688999999999999999854
No 29
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.1e-33 Score=305.28 Aligned_cols=259 Identities=25% Similarity=0.431 Sum_probs=227.6
Q ss_pred ccCCeEEEEEccCCcee------------------------eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-cceE
Q psy13969 140 MRCPIFSMTWTPEGRRL------------------------AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-NNVK 194 (877)
Q Consensus 140 ~~~~i~~~~~sp~g~~l------------------------~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~-~~~~ 194 (877)
+...|.+++|+|+++++ .|...|.+++|++++++|++++.|++|+|||+.+ ..+.
T Consensus 12 h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~ 91 (304)
T 2ynn_A 12 RSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV 91 (304)
T ss_dssp ECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEE
Confidence 34568888888888776 2788999999999999999999999999999875 4567
Q ss_pred EEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCC-eeeEEeccCCCCeEEEEEcC-CCCEEEEEecCCcccEEEEc
Q psy13969 195 TFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRC-TEEKVLRGHGADVKCVDWHP-YKSLIVSGSKDNQQPVKLWD 272 (877)
Q Consensus 195 ~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~-~~~~~l~~h~~~v~~v~~sp-~~~~l~sgs~dg~~~I~iwd 272 (877)
.+..|...|++|+|+|++.+|++++.|++|+|||+.+. .....+..|...|.+++|+| ++.+|++++.|+. |++||
T Consensus 92 ~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~--v~iwd 169 (304)
T 2ynn_A 92 DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT--VKVWS 169 (304)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSE--EEEEE
T ss_pred EEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCe--EEEEE
Confidence 88999999999999999999999999999999999876 55677889999999999999 5789999999999 99999
Q ss_pred CCCCceeEEec-cCCCCeeEEEEcc--CCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEe
Q psy13969 273 PKAGQALATLH-AHKSTVMDLAWNQ--NGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGG 349 (877)
Q Consensus 273 ~~~~~~~~~~~-~h~~~V~~l~~sp--~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs 349 (877)
+++......+. .|...|..++|++ ++.+|++++.|++|+|||+++ ...+.++..|...|++++|+|++. +|++++
T Consensus 170 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~-~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s 247 (304)
T 2ynn_A 170 LGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT-KSCVATLEGHMSNVSFAVFHPTLP-IIISGS 247 (304)
T ss_dssp TTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSSS-EEEEEE
T ss_pred CCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC-CccceeeCCCCCCEEEEEECCCCC-EEEEEc
Confidence 99877666654 4668899999987 778999999999999999998 678899999999999999999988 899999
Q ss_pred CCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCC--EEEEEEcCCeEEEEeCCC
Q psy13969 350 ADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGH--ILATGSNDHASKFWTRNR 404 (877)
Q Consensus 350 ~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~--~l~sg~~dg~v~iwd~~~ 404 (877)
.|++|+|||+.+.+.+..+ ..|...|++++|+|++. +|++++ |..+.+|++..
T Consensus 248 ~Dg~i~iWd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~asg~-~~g~~~~~~~~ 302 (304)
T 2ynn_A 248 EDGTLKIWNSSTYKVEKTL-NVGLERSWCIATHPTGRKNYIASGF-DNGFTVLSLGN 302 (304)
T ss_dssp TTSCEEEEETTTCCEEEEE-CCSSSSEEEEEECTTCGGGCEEEEE-TTEEEEEECC-
T ss_pred CCCeEEEEECCCCceeeec-cCCCccEEEEEECCCCCceEEEEec-CCceEEEEecc
Confidence 9999999999999988888 67888999999999874 567666 45577787653
No 30
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-35 Score=329.27 Aligned_cols=295 Identities=20% Similarity=0.375 Sum_probs=251.5
Q ss_pred eeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-----cceEEEccCCCCeeEEEEcCC-CCEEEEEECCCcEEEEec
Q psy13969 156 LAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-----NNVKTFQGHKESIRGISFSPS-DSKFATCSDDGTVRVWDF 229 (877)
Q Consensus 156 l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~-----~~~~~~~~h~~~V~~i~~sp~-~~~l~sgs~Dg~I~iwd~ 229 (877)
+.|...|++++|++++++|++++.|+.|+||++.. ..+..+..|...|++++|+++ +++|++++.|++|+|||+
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 46889999999999999999999999999999876 467788899999999999998 899999999999999999
Q ss_pred cCCe------eeEE---eccCCCCeEEEEEcCC-CCEEEEEecCCcccEEEEcCCCCceeEEeccC------CCCeeEEE
Q psy13969 230 YRCT------EEKV---LRGHGADVKCVDWHPY-KSLIVSGSKDNQQPVKLWDPKAGQALATLHAH------KSTVMDLA 293 (877)
Q Consensus 230 ~~~~------~~~~---l~~h~~~v~~v~~sp~-~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h------~~~V~~l~ 293 (877)
.+.+ .... +..|...|.+++|+++ +.+|++++.|+. |++||+++.+.+..+..| ...|.+++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~ 221 (416)
T 2pm9_A 144 NKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNF--ASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVE 221 (416)
T ss_dssp TTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSC--EEEEETTTTEEEEEECCCCCSSCCCCCEEEEE
T ss_pred CCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCC--EEEEECCCCCcceEEeccccccccCCceEEEE
Confidence 8876 3333 3578999999999999 789999999998 999999999999888776 78999999
Q ss_pred EccCC-CeEEEEeCCC---eEEEEEcCCCCcceEEEe-cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEe
Q psy13969 294 WNQNG-NWLVTASRDH---LLKVFDIRNLSSEVQTFR-GHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCI 368 (877)
Q Consensus 294 ~sp~g-~~l~s~s~Dg---~I~iwd~~~~~~~~~~~~-~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~ 368 (877)
|+|++ .+|++++.|+ .|++||++.....+..+. .|...|++++|+|....+|++++.|+.|+|||+.+.+.+..+
T Consensus 222 ~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~ 301 (416)
T 2pm9_A 222 WHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQF 301 (416)
T ss_dssp ECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEE
T ss_pred ECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceee
Confidence 99987 6899999998 999999998656777787 899999999999943448899999999999999999988887
Q ss_pred cCcCCCCEEEEEEcCCC-CEEEEEEcCCeEEEEeCCCCCCCccccc----------------------------ccCCcc
Q psy13969 369 PQAHDNIIWTMAWHPLG-HILATGSNDHASKFWTRNRLGDPMRDRY----------------------------NQKGLA 419 (877)
Q Consensus 369 ~~~h~~~V~~v~~sp~g-~~l~sg~~dg~v~iwd~~~~~~~~~~~~----------------------------~~~~~~ 419 (877)
..|...|++++|+|++ .+|++++.|+.|+||++........... ......
T Consensus 302 -~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (416)
T 2pm9_A 302 -PARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPT 380 (416)
T ss_dssp -ECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCS
T ss_pred -cCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCc
Confidence 6899999999999998 8999999999999999987543322100 000011
Q ss_pred eeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCC
Q psy13969 420 HCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 420 ~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~ 454 (877)
.+...+..++|++++.+|+++. .|+.+++|+..+
T Consensus 381 ~~~~~~~~~~~s~dg~~la~~~-~d~~v~~w~~~~ 414 (416)
T 2pm9_A 381 WYGEPSPAAHWAFGGKLVQITP-DGKGVSITNPKI 414 (416)
T ss_dssp TTCCCSCCCEEETTTEEECBCT-TSSCBCCBCCCC
T ss_pred cccCCccceEEeeCCeEEEEeC-CCCeEEEEEecc
Confidence 1344567889999999888875 789999998764
No 31
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.5e-34 Score=322.45 Aligned_cols=262 Identities=23% Similarity=0.405 Sum_probs=232.0
Q ss_pred CccCCeEEEEEccCCceee------------------------ccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc---
Q psy13969 139 KMRCPIFSMTWTPEGRRLA------------------------HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN--- 191 (877)
Q Consensus 139 ~~~~~i~~~~~sp~g~~l~------------------------h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~--- 191 (877)
.+...|++++|+|++++|+ |...|.+++|+|++++|++++.|+.|+||++...
T Consensus 64 gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~ 143 (380)
T 3iz6_a 64 GHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADR 143 (380)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSC
T ss_pred ccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccc
Confidence 4667899999999998872 7788999999999999999999999999997542
Q ss_pred -----ceEEEccCCCCeeEEEEcCC-CCEEEEEECCCcEEEEeccCCeeeEEe-----ccCCCCeEEEEEcC-CCCEEEE
Q psy13969 192 -----NVKTFQGHKESIRGISFSPS-DSKFATCSDDGTVRVWDFYRCTEEKVL-----RGHGADVKCVDWHP-YKSLIVS 259 (877)
Q Consensus 192 -----~~~~~~~h~~~V~~i~~sp~-~~~l~sgs~Dg~I~iwd~~~~~~~~~l-----~~h~~~v~~v~~sp-~~~~l~s 259 (877)
....+.+|...|.+++|+++ ..+|++++.|++|++||+.+++.+..+ ..|...|.+++|++ ++++|++
T Consensus 144 ~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 223 (380)
T 3iz6_a 144 DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFIS 223 (380)
T ss_dssp CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEE
T ss_pred cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEE
Confidence 34567899999999999996 457999999999999999999888877 57899999999987 7889999
Q ss_pred EecCCcccEEEEcCC-CCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCC-------CC
Q psy13969 260 GSKDNQQPVKLWDPK-AGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHK-------KE 331 (877)
Q Consensus 260 gs~dg~~~I~iwd~~-~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~-------~~ 331 (877)
++.|+. |++||++ ..+.+..+.+|...|++|+|+|++.+|++++.|++|+|||+++ ...+..+..+. ..
T Consensus 224 gs~D~~--v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~-~~~~~~~~~~~~~~~~~~~~ 300 (380)
T 3iz6_a 224 GSCDTT--VRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT-GHQLQVYNREPDRNDNELPI 300 (380)
T ss_dssp EETTSC--EEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT-TEEEEEECCCCSSSCCSSCS
T ss_pred EECCCe--EEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC-CcEEEEecccccccccccCc
Confidence 999999 9999998 4578889999999999999999999999999999999999998 45566665433 24
Q ss_pred eEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEec---CcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 332 ASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIP---QAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 332 v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~---~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
|++++|++++. +|++++.|+.|+|||+...+.+..+. ..|...|++++|+|++.+|++++.|++|+||++..
T Consensus 301 v~~~~~s~~g~-~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 301 VTSVAFSISGR-LLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp CSEEEECSSSS-EEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred eEEEEECCCCC-EEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 89999999998 88999999999999999888776652 57899999999999999999999999999999864
No 32
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.8e-33 Score=331.65 Aligned_cols=296 Identities=25% Similarity=0.491 Sum_probs=262.9
Q ss_pred ccCCeEEEEEccCCcee-----------------------eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEE
Q psy13969 140 MRCPIFSMTWTPEGRRL-----------------------AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTF 196 (877)
Q Consensus 140 ~~~~i~~~~~sp~g~~l-----------------------~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~ 196 (877)
+...|.+++|+++++++ .|...|++++|++++++|++++.|+.|++|+.+...+..+
T Consensus 220 ~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~ 299 (577)
T 2ymu_A 220 HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTL 299 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEE
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEE
Confidence 45678899999998776 2788999999999999999999999999999988888899
Q ss_pred ccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCC
Q psy13969 197 QGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG 276 (877)
Q Consensus 197 ~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~ 276 (877)
..|...|++++|+|++.+|++++.|++|++||+.. ..+..+..|...|.+++|+|++++|++++.|+. |++||. ++
T Consensus 300 ~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~--v~~~~~-~~ 375 (577)
T 2ymu_A 300 TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKT--VKLWNR-NG 375 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSE--EEEEET-TC
T ss_pred ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCE--EEEEcC-CC
Confidence 99999999999999999999999999999999854 566778889999999999999999999999998 999995 56
Q ss_pred ceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEE
Q psy13969 277 QALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMF 356 (877)
Q Consensus 277 ~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~i 356 (877)
+.+..+..|...|.+|+|++++++|++++.|+.|+|||.. ...+..+..|...|++++|+|++. +|++++.|+.|++
T Consensus 376 ~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~--~~~~~~~~~~~~~v~~~~~s~d~~-~l~~~~~d~~v~~ 452 (577)
T 2ymu_A 376 QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVWGVAFSPDDQ-TIASASDDKTVKL 452 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT--CCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEE
T ss_pred CEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC--CCEEEEecCCCCCeEEEEECCCCC-EEEEEcCCCEEEE
Confidence 7888899999999999999999999999999999999965 467888999999999999999988 8899999999999
Q ss_pred EEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCe
Q psy13969 357 WHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSA 436 (877)
Q Consensus 357 wd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~ 436 (877)
||+. .+.+..+ ..|...|++++|+|++++|++++.|+.|+|||.+. ..+ ..+..|...|.+++|++++.+
T Consensus 453 w~~~-~~~~~~~-~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~--~~~------~~~~~h~~~v~~l~~s~dg~~ 522 (577)
T 2ymu_A 453 WNRN-GQLLQTL-TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG--QLL------QTLTGHSSSVRGVAFSPDGQT 522 (577)
T ss_dssp EETT-SCEEEEE-ECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS--CEE------EEEECCSSCEEEEEECTTSSC
T ss_pred EECC-CCEEEEE-cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC--CEE------EEEeCCCCCEEEEEEcCCCCE
Confidence 9974 4556565 68999999999999999999999999999999642 222 224456677999999999999
Q ss_pred EEeccCCCCeeeecCCC
Q psy13969 437 VIPGMGLEDEDSVFPSS 453 (877)
Q Consensus 437 l~~~~g~d~~~~~~~~~ 453 (877)
|+++. .|+.+++|+..
T Consensus 523 l~s~~-~dg~v~lwd~~ 538 (577)
T 2ymu_A 523 IASAS-DDKTVKLWNRN 538 (577)
T ss_dssp EEEEE-TTSEEEEECTT
T ss_pred EEEEE-CcCEEEEEeCC
Confidence 98864 78999999854
No 33
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.8e-33 Score=301.08 Aligned_cols=261 Identities=27% Similarity=0.505 Sum_probs=232.5
Q ss_pred CccCCeEEEEEccCCcee------------------------eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ce
Q psy13969 139 KMRCPIFSMTWTPEGRRL------------------------AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NV 193 (877)
Q Consensus 139 ~~~~~i~~~~~sp~g~~l------------------------~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~ 193 (877)
.+...|.+++|+|+++++ .|...|.+++|++++++|++++.|+.|++||+... .+
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~ 100 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL 100 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred ccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEE
Confidence 456678888888888777 38889999999999999999999999999998764 46
Q ss_pred EEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcC
Q psy13969 194 KTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDP 273 (877)
Q Consensus 194 ~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~ 273 (877)
..+..|...|.+++|++++++|++++.|++|++||+.+.+.+..+..|...|.+++|++++++|++++.|+. |++||+
T Consensus 101 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--i~~wd~ 178 (312)
T 4ery_A 101 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL--CRIWDT 178 (312)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC--EEEEET
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCc--EEEEEC
Confidence 788899999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCCceeEEec-cCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEE--EEEcCCCCcEEEEEeC
Q psy13969 274 KAGQALATLH-AHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASA--VAWHPQHEGLFSSGGA 350 (877)
Q Consensus 274 ~~~~~~~~~~-~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~--i~~~p~~~~~l~sgs~ 350 (877)
++.+.+..+. .+...|.+++|++++++|++++.|+.|+|||+++ ...+..+..|...+.+ +.|++....+|++++.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~ 257 (312)
T 4ery_A 179 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE 257 (312)
T ss_dssp TTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTT-TEEEEEECSSCCSSSCCCEEEECSSSCEEEECCT
T ss_pred CCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC-CcEEEEEEecCCceEEEEEEEEeCCCcEEEEECC
Confidence 9998877764 4667899999999999999999999999999998 5677788888765433 3555544558999999
Q ss_pred CCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEE--cCCeEEEEeCC
Q psy13969 351 DGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGS--NDHASKFWTRN 403 (877)
Q Consensus 351 dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~--~dg~v~iwd~~ 403 (877)
|+.|++||+.+.+.+..+ ..|...|.+++|+|++.+|++++ .|++|++|+.+
T Consensus 258 dg~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 258 DNLVYIWNLQTKEIVQKL-QGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp TSCEEEEETTTCCEEEEE-CCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CCEEEEEECCCchhhhhh-hccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 999999999999988887 78999999999999999999997 69999999864
No 34
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-34 Score=319.99 Aligned_cols=288 Identities=16% Similarity=0.253 Sum_probs=250.4
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEE
Q psy13969 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKV 237 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~ 237 (877)
|...|++++|++++++|++++.|+.|+||+.+...+..+..|...|++++|++++++|++++.|+.|++||+.+.+.+..
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 186 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQH 186 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEE
Confidence 57799999999999999999999999999988888889999999999999999999999999999999999999999988
Q ss_pred eccCCCC---------------eEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEE
Q psy13969 238 LRGHGAD---------------VKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLV 302 (877)
Q Consensus 238 l~~h~~~---------------v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~ 302 (877)
+..+... |.+++|+++ ..+++++.++. |++||+++.+.+..+..|...|.+++|++++++|+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~--i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 263 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVDD-DKFVIPGPKGA--IFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLL 263 (425)
T ss_dssp ECCC---------------CCCBSCCEEEET-TEEEEECGGGC--EEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEE
T ss_pred eeccccCccceeeccccCCcceeeEEEEcCC-CEEEEEcCCCe--EEEEEcCCCceeeeeccCCCceEEEEECCCCCEEE
Confidence 8887776 999999987 56888999988 99999999999999999999999999999999999
Q ss_pred EEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEc
Q psy13969 303 TASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWH 382 (877)
Q Consensus 303 s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~s 382 (877)
+++.|+.|++||++. ...+..+..|...|.+++|++++ +|++++.|+.|++||+.+.+.+..+ ..|...|++++|+
T Consensus 264 ~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~i~~~~~s 339 (425)
T 1r5m_A 264 SASDDGTLRIWHGGN-GNSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTLLALS-IVDGVPIFAGRIS 339 (425)
T ss_dssp EEETTSCEEEECSSS-BSCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTEEEEEE-ECTTCCEEEEEEC
T ss_pred EEcCCCEEEEEECCC-CccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcEeEec-ccCCccEEEEEEc
Confidence 999999999999988 56778888899999999999988 7899999999999999999888777 6788999999999
Q ss_pred CCCCEEEEEEcCCeEEEEeCCCCCCCccccc-------------ccCCcceeee--eeeeeeccCCCCeEEeccCCCCee
Q psy13969 383 PLGHILATGSNDHASKFWTRNRLGDPMRDRY-------------NQKGLAHCIT--GVYNEEMELNDSAVIPGMGLEDED 447 (877)
Q Consensus 383 p~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~-------------~~~~~~~~~~--~v~~~~~~~d~~~l~~~~g~d~~~ 447 (877)
+++++|++++.|+.|+|||+........... ....+..+.. .+.++.|++++.+|+++. .++.+
T Consensus 340 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i 418 (425)
T 1r5m_A 340 QDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAY-SLQEG 418 (425)
T ss_dssp TTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEE-SSSCC
T ss_pred CCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEe-cCceE
Confidence 9999999999999999999975331110000 1222333433 789999999999888874 78899
Q ss_pred eecCCC
Q psy13969 448 SVFPSS 453 (877)
Q Consensus 448 ~~~~~~ 453 (877)
++|+..
T Consensus 419 ~iw~~~ 424 (425)
T 1r5m_A 419 SVVAIP 424 (425)
T ss_dssp EEEECC
T ss_pred EEEeec
Confidence 999753
No 35
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8.9e-33 Score=300.23 Aligned_cols=241 Identities=20% Similarity=0.359 Sum_probs=214.1
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeee
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEE 235 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~ 235 (877)
+|...|++++|++++++|++++.|++|+|||+.+. .+..+..|...|.+++|++++.+|++++.|++|+|||+. ...+
T Consensus 63 ~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~ 141 (319)
T 3frx_A 63 GHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCL 141 (319)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEE
T ss_pred CCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeE
Confidence 58999999999999999999999999999998765 467789999999999999999999999999999999995 5677
Q ss_pred EEeccCCCCeEEEEEcCC------CCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCe
Q psy13969 236 KVLRGHGADVKCVDWHPY------KSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHL 309 (877)
Q Consensus 236 ~~l~~h~~~v~~v~~sp~------~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~ 309 (877)
..+..|...|.+++|+|. +.+|++++.|+. |++||+++.+....+..|...|++++|+|++++|++++.|++
T Consensus 142 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~--i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~ 219 (319)
T 3frx_A 142 ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKM--VKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGE 219 (319)
T ss_dssp EEECCCSSCEEEEEECCC------CCEEEEEETTSC--EEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCE
T ss_pred EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCE--EEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 888899999999999985 448999999999 999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEec-------CcCCCCEEEEEEc
Q psy13969 310 LKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIP-------QAHDNIIWTMAWH 382 (877)
Q Consensus 310 I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~-------~~h~~~V~~v~~s 382 (877)
|+|||++. ...+..+.. ...|.+++|+|++. +|++++ +..|++|++.....+..+. ..|...|.+++|+
T Consensus 220 i~iwd~~~-~~~~~~~~~-~~~v~~~~~sp~~~-~la~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 295 (319)
T 3frx_A 220 IMLWNLAA-KKAMYTLSA-QDEVFSLAFSPNRY-WLAAAT-ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWS 295 (319)
T ss_dssp EEEEETTT-TEEEEEEEC-CSCEEEEEECSSSS-EEEEEE-TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEEC
T ss_pred EEEEECCC-CcEEEEecC-CCcEEEEEEcCCCC-EEEEEc-CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEEC
Confidence 99999998 566666664 46899999999987 666665 4569999998877665542 2356679999999
Q ss_pred CCCCEEEEEEcCCeEEEEeCCC
Q psy13969 383 PLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 383 p~g~~l~sg~~dg~v~iwd~~~ 404 (877)
|++++|++++.|+.|+|||+.+
T Consensus 296 pdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 296 ADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp TTSSEEEEEETTSCEEEEEEEE
T ss_pred CCCCEEEEeecCceEEEEEEee
Confidence 9999999999999999999854
No 36
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.1e-33 Score=338.86 Aligned_cols=292 Identities=22% Similarity=0.341 Sum_probs=243.7
Q ss_pred ceeeccCCEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCc------ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEE
Q psy13969 154 RRLAHDCAVRHMVWSHNG-LWMVTSDHQGYIKYWQSNMN------NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRV 226 (877)
Q Consensus 154 ~~l~h~~~V~~l~~spd~-~~l~sg~~dg~v~iwd~~~~------~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~i 226 (877)
.+.+|...|++|+|++++ ++|++++.|++|+||++... ....+.+|...|++|+|++++++|++++.|++|+|
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~v 456 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 456 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEE
Confidence 345799999999999864 79999999999999997642 24578899999999999999999999999999999
Q ss_pred EeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEe---ccCCCCeeEEEEccCC--CeE
Q psy13969 227 WDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATL---HAHKSTVMDLAWNQNG--NWL 301 (877)
Q Consensus 227 wd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~---~~h~~~V~~l~~sp~g--~~l 301 (877)
||+.++..+..+..|...|.+++|++++++|++++.|+. |++||+......... ..|...|.+++|++++ .+|
T Consensus 457 wd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~--i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 457 WDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRT--IKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSC--EEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred EECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCE--EEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 999999999999999999999999999999999999999 999998755433332 4688999999999976 589
Q ss_pred EEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEE
Q psy13969 302 VTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAW 381 (877)
Q Consensus 302 ~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~ 381 (877)
++++.|++|+|||++. ...+..+..|...|++|+|+|++. +|++++.|++|+|||+.+.+.+..+ .+...|.+++|
T Consensus 535 ~s~s~d~~v~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg~-~l~sg~~Dg~i~iwd~~~~~~~~~~--~~~~~v~~~~~ 610 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSN-CKLRSTLAGHTGYVSTVAVSPDGS-LCASGGKDGVVLLWDLAEGKKLYSL--EANSVIHALCF 610 (694)
T ss_dssp EEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSBCEEEETTTTEEEECC--BCSSCEEEEEE
T ss_pred EEEeCCCeEEEEECCC-CcEEEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCceEEEe--cCCCcEEEEEE
Confidence 9999999999999987 577788999999999999999988 8999999999999999999888766 45668999999
Q ss_pred cCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccC------------CcceeeeeeeeeeccCCCCeEEeccCCCCeeee
Q psy13969 382 HPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQK------------GLAHCITGVYNEEMELNDSAVIPGMGLEDEDSV 449 (877)
Q Consensus 382 sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~------------~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~ 449 (877)
+|++.+|++++ |+.|+|||+.............. ....+...+.++.|++++.+|++++ .|+.+++
T Consensus 611 sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs-~Dg~i~i 688 (694)
T 3dm0_A 611 SPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGY-TDGVIRV 688 (694)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEE-TTSEEEE
T ss_pred cCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEc-CCCeEEE
Confidence 99998887765 66799999976422111100000 0011122367899999999999975 7999999
Q ss_pred cCCC
Q psy13969 450 FPSS 453 (877)
Q Consensus 450 ~~~~ 453 (877)
|+..
T Consensus 689 W~i~ 692 (694)
T 3dm0_A 689 WGIG 692 (694)
T ss_dssp EEC-
T ss_pred Eecc
Confidence 9764
No 37
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.3e-33 Score=318.78 Aligned_cols=290 Identities=16% Similarity=0.207 Sum_probs=239.4
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEE-ccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEe
Q psy13969 160 CAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTF-QGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVL 238 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~-~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l 238 (877)
..+....|++++++|++++.|+.|+|||+........ ..|...|++++|++++++|++++.|++|+|||+.+.+.+..+
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 177 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL 177 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE
Confidence 4455567899999999999999999999887665544 699999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEecc---CC---------------------CCeeEEEE
Q psy13969 239 RGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHA---HK---------------------STVMDLAW 294 (877)
Q Consensus 239 ~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~---h~---------------------~~V~~l~~ 294 (877)
..|...|++++|+|++++|++++.|+. |++||+++++.+..+.. |. ..|.+++|
T Consensus 178 ~~h~~~v~~~~~~~~~~~l~s~~~d~~--v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~ 255 (420)
T 3vl1_A 178 IGHRATVTDIAIIDRGRNVLSASLDGT--IRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEF 255 (420)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETTSC--EEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCS
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCc--EEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEE
Confidence 999999999999999999999999999 99999999998888864 33 34444556
Q ss_pred ccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCce-eEEecCcCC
Q psy13969 295 NQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKE-VGCIPQAHD 373 (877)
Q Consensus 295 sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~-~~~~~~~h~ 373 (877)
++++++|++++.|+.|+|||+++..........|...|++++|+|++..+|++++.|+.|++||+++.+. +..+...|.
T Consensus 256 s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~ 335 (420)
T 3vl1_A 256 GTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEG 335 (420)
T ss_dssp SCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTT
T ss_pred cCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCC
Confidence 7889999999999999999999854444455568899999999999987899999999999999998754 555644478
Q ss_pred CCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccc--cccCCcceeeeeeeeeeccCCCC---eEEeccCCCCeee
Q psy13969 374 NIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDR--YNQKGLAHCITGVYNEEMELNDS---AVIPGMGLEDEDS 448 (877)
Q Consensus 374 ~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~d~~---~l~~~~g~d~~~~ 448 (877)
..|+++.|+ ++.+|++++.|+.|+||++.......... .....+..+...+.+++|++++. .+++. +.++.+.
T Consensus 336 ~~v~~~~~~-~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~-g~~g~~~ 413 (420)
T 3vl1_A 336 TPINNVYFA-AGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEV-GKNNFCA 413 (420)
T ss_dssp SCEEEEEEE-TTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEE-ETTTEEE
T ss_pred CCceEEEeC-CCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEE-cCCceEE
Confidence 889888665 67899999999999999998743332111 11112334556688999999988 45553 5688899
Q ss_pred ecCCC
Q psy13969 449 VFPSS 453 (877)
Q Consensus 449 ~~~~~ 453 (877)
+|...
T Consensus 414 ~~~~~ 418 (420)
T 3vl1_A 414 LYNLS 418 (420)
T ss_dssp EEESC
T ss_pred EEecc
Confidence 99764
No 38
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4e-34 Score=310.47 Aligned_cols=245 Identities=19% Similarity=0.394 Sum_probs=209.4
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc---ceEEEccCCCCeeEEEEcC--CCCEEEEEECCCcEEEEeccC
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN---NVKTFQGHKESIRGISFSP--SDSKFATCSDDGTVRVWDFYR 231 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~---~~~~~~~h~~~V~~i~~sp--~~~~l~sgs~Dg~I~iwd~~~ 231 (877)
+|...|++++|++++++||+++.|++|+|||+... .+..+.+|...|++|+|++ ++++|++++.|++|+|||+.+
T Consensus 11 ~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~ 90 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN 90 (316)
T ss_dssp ---CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS
T ss_pred cccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC
Confidence 69999999999999999999999999999997654 3567889999999999986 488999999999999999987
Q ss_pred C--eeeEEeccCCCCeEEEEEcCC--CCEEEEEecCCcccEEEEcCCCCce---eEEeccCCCCeeEEEEccC-------
Q psy13969 232 C--TEEKVLRGHGADVKCVDWHPY--KSLIVSGSKDNQQPVKLWDPKAGQA---LATLHAHKSTVMDLAWNQN------- 297 (877)
Q Consensus 232 ~--~~~~~l~~h~~~v~~v~~sp~--~~~l~sgs~dg~~~I~iwd~~~~~~---~~~~~~h~~~V~~l~~sp~------- 297 (877)
. .....+..|...|.+++|+|+ +.+|++++.|+. |++||+++... ...+..|...|.+++|+|+
T Consensus 91 ~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~--i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 168 (316)
T 3bg1_A 91 GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGA--ISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 (316)
T ss_dssp SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSC--EEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC----
T ss_pred CcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCC--EEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccc
Confidence 6 356678889999999999998 789999999999 99999987632 3455789999999999997
Q ss_pred ----------CCeEEEEeCCCeEEEEEcCCCC--cceEEEecCCCCeEEEEEcCCC---CcEEEEEeCCCcEEEEEcCCC
Q psy13969 298 ----------GNWLVTASRDHLLKVFDIRNLS--SEVQTFRGHKKEASAVAWHPQH---EGLFSSGGADGSIMFWHVGAD 362 (877)
Q Consensus 298 ----------g~~l~s~s~Dg~I~iwd~~~~~--~~~~~~~~h~~~v~~i~~~p~~---~~~l~sgs~dg~I~iwd~~~~ 362 (877)
+.+|++++.|++|+|||++... ..+..+..|...|.+++|+|++ ..+|++++.|++|+|||+...
T Consensus 169 ~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~ 248 (316)
T 3bg1_A 169 DHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDA 248 (316)
T ss_dssp --CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSST
T ss_pred ccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCc
Confidence 4789999999999999997532 3566788999999999999986 248999999999999999762
Q ss_pred ---c-eeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 363 ---K-EVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 363 ---~-~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
. ....+ ..|...|++++|+|++++||+++.|++|+||+...
T Consensus 249 ~~~~~~~~~~-~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 249 SSNTWSPKLL-HKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp TCCCCBCCEE-EECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred cccchhhhhh-hcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 1 11223 46888999999999999999999999999999753
No 39
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-32 Score=302.48 Aligned_cols=285 Identities=14% Similarity=0.251 Sum_probs=251.1
Q ss_pred eeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-cceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCee
Q psy13969 156 LAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTE 234 (877)
Q Consensus 156 l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~-~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~ 234 (877)
.+|...|++|+|++++++|++++.|+.|+|||+.. ..+..+..|...|++++|++++++|++++.|++|+|||+.+.+.
T Consensus 29 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 108 (369)
T 3zwl_B 29 TGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQC 108 (369)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred EEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 36899999999999999999999999999999765 45678889999999999999999999999999999999999998
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEecC-----CcccEEEEcCCCCc-----------eeEEeccCCC--CeeEEEEcc
Q psy13969 235 EKVLRGHGADVKCVDWHPYKSLIVSGSKD-----NQQPVKLWDPKAGQ-----------ALATLHAHKS--TVMDLAWNQ 296 (877)
Q Consensus 235 ~~~l~~h~~~v~~v~~sp~~~~l~sgs~d-----g~~~I~iwd~~~~~-----------~~~~~~~h~~--~V~~l~~sp 296 (877)
+..+. |...|.+++|++++++|++++.+ +. |++||+.+.. .+..+..|.. .|.+++|++
T Consensus 109 ~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (369)
T 3zwl_B 109 VATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGS--INIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWST 185 (369)
T ss_dssp EEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCE--EEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECG
T ss_pred EEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCE--EEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcC
Confidence 88888 88999999999999999999998 88 9999987653 3445555666 999999999
Q ss_pred CCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCE
Q psy13969 297 NGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNII 376 (877)
Q Consensus 297 ~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V 376 (877)
++++|++++.|+.|++||+++....+..+..|...|.+++|++++. +|++++.|+.|++||+.+.+.+..+ .+...+
T Consensus 186 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~--~~~~~~ 262 (369)
T 3zwl_B 186 KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLT-YFITSSRDTNSFLVDVSTLQVLKKY--ETDCPL 262 (369)
T ss_dssp GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEE--ECSSCE
T ss_pred CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCC-EEEEecCCceEEEEECCCCceeeee--cCCCCc
Confidence 9999999999999999999985677888999999999999999987 7889999999999999999988887 378889
Q ss_pred EEEEEcCCCCEEEEEEcCC--------------eEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccC
Q psy13969 377 WTMAWHPLGHILATGSNDH--------------ASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMG 442 (877)
Q Consensus 377 ~~v~~sp~g~~l~sg~~dg--------------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g 442 (877)
.+++|++++.+|++++.++ .|++||+...... ..+..+...|.++.|++++.+|+++.
T Consensus 263 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-------~~~~~~~~~v~~~~~s~~~~~l~s~~- 334 (369)
T 3zwl_B 263 NTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEI-------GRVQGHFGPLNTVAISPQGTSYASGG- 334 (369)
T ss_dssp EEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEE-------EEEECCSSCEEEEEECTTSSEEEEEE-
T ss_pred eeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcch-------hheecccCcEEEEEECCCCCEEEEEc-
Confidence 9999999999999999998 8999998654221 12344566799999999999888874
Q ss_pred CCCeeeecCCCC
Q psy13969 443 LEDEDSVFPSSE 454 (877)
Q Consensus 443 ~d~~~~~~~~~~ 454 (877)
.|+.+++|+...
T Consensus 335 ~dg~v~iw~~~~ 346 (369)
T 3zwl_B 335 EDGFIRLHHFEK 346 (369)
T ss_dssp TTSEEEEEEECH
T ss_pred CCCeEEEEECcc
Confidence 789999998764
No 40
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.6e-32 Score=298.20 Aligned_cols=292 Identities=20% Similarity=0.307 Sum_probs=245.5
Q ss_pred eeeccCCEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCc------ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEE
Q psy13969 155 RLAHDCAVRHMVWSHN-GLWMVTSDHQGYIKYWQSNMN------NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVW 227 (877)
Q Consensus 155 ~l~h~~~V~~l~~spd-~~~l~sg~~dg~v~iwd~~~~------~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iw 227 (877)
+.+|...|++|+|+|+ +++|||++.|++|+|||+... ....+.+|...|++++|++++++|++++.|+.|++|
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEE
Confidence 3479999999999997 689999999999999996543 356788999999999999999999999999999999
Q ss_pred eccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCce-eEEeccCCCCeeEEEEccCC--CeEEEE
Q psy13969 228 DFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQA-LATLHAHKSTVMDLAWNQNG--NWLVTA 304 (877)
Q Consensus 228 d~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~-~~~~~~h~~~V~~l~~sp~g--~~l~s~ 304 (877)
+............+...+.++.+++++.+|++++.|+. +++||+..... ...+..|...|.+++|+++. .+++++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~--~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~ 191 (340)
T 4aow_A 114 DLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT--IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSC 191 (340)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSC--EEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEE
T ss_pred eecccceeeeecCCCCceeEEEEeecCccceeecCCCe--EEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEE
Confidence 99999888888889999999999999999999999999 99999986554 34456789999999999854 578899
Q ss_pred eCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCC
Q psy13969 305 SRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPL 384 (877)
Q Consensus 305 s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~ 384 (877)
+.|++|++||+++ ...+..+..|...|++|+|+|++. +|++++.|+.|+|||+++.+.+..+ .+...|.+++|+++
T Consensus 192 ~~d~~i~i~d~~~-~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~ 267 (340)
T 4aow_A 192 GWDKLVKVWNLAN-CKLKTNHIGHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLNEGKHLYTL--DGGDIINALCFSPN 267 (340)
T ss_dssp ETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSS-EEEEEETTCEEEEEETTTTEEEEEE--ECSSCEEEEEECSS
T ss_pred cCCCEEEEEECCC-CceeeEecCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEeccCceeeee--cCCceEEeeecCCC
Confidence 9999999999998 677888999999999999999988 8999999999999999999988877 45568999999998
Q ss_pred CCEEEEEEcCCeEEEEeCCCCCCCc--ccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCC
Q psy13969 385 GHILATGSNDHASKFWTRNRLGDPM--RDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 385 g~~l~sg~~dg~v~iwd~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~ 454 (877)
+.+| +++.|+.|+|||++...... ...........+...|.+++|++++.+|++++ .|+.+++|+..+
T Consensus 268 ~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs-~Dg~v~iW~~~t 337 (340)
T 4aow_A 268 RYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY-TDNLVRVWQVTI 337 (340)
T ss_dssp SSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEE-TTSCEEEEEEEC
T ss_pred Ccee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEe-CCCEEEEEeCCC
Confidence 7655 56679999999987532111 11111122335667799999999999999874 789999997653
No 41
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=6e-33 Score=307.38 Aligned_cols=292 Identities=14% Similarity=0.243 Sum_probs=245.4
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc---ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCe
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN---NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCT 233 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~---~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~ 233 (877)
.|...|++++|++++++|++++.|+.|+||++... .+..+..|...|++++|++++++|++++.|+.|++||+.+.+
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence 37889999999999999999999999999998776 677888999999999999999999999999999999998876
Q ss_pred eeEE--eccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCce---e-EEeccCCCCeeEEEEccCCCeEEEEeCC
Q psy13969 234 EEKV--LRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQA---L-ATLHAHKSTVMDLAWNQNGNWLVTASRD 307 (877)
Q Consensus 234 ~~~~--l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~---~-~~~~~h~~~V~~l~~sp~g~~l~s~s~D 307 (877)
.... +..|...|.+++|++++++|++++.|+. |++||++.... . .....|...|++++|++++++|++++.|
T Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 86 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRV--ISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSS--EEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCE--EEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 5444 4668999999999999999999999998 99999988763 2 3336789999999999999999999999
Q ss_pred CeEEEEEcCC-----------------CCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecC
Q psy13969 308 HLLKVFDIRN-----------------LSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ 370 (877)
Q Consensus 308 g~I~iwd~~~-----------------~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 370 (877)
+.|++||++. ....+..+..|...|++++|++++. +|++++.|+.|++||+++.+.+..+ .
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~-~ 241 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS-RVAWVSHDSTVCLADADKKMAVATL-A 241 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS-EEEEEETTTEEEEEEGGGTTEEEEE-E
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC-EEEEEeCCCEEEEEECCCCceeEEE-c
Confidence 9999999641 2466778888999999999999987 8899999999999999999988888 6
Q ss_pred cCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCc----------------------------ccccc-----cCC
Q psy13969 371 AHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPM----------------------------RDRYN-----QKG 417 (877)
Q Consensus 371 ~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~----------------------------~~~~~-----~~~ 417 (877)
.|...|++++|++++.+|+++ .|+.|++|++......+ ..... ...
T Consensus 242 ~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (372)
T 1k8k_C 242 SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAG 320 (372)
T ss_dssp CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CC
T ss_pred cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccc
Confidence 788899999999999988887 89999999997611100 00000 012
Q ss_pred c-ceeeeeeeeeecc-CCC---CeEEeccCCCCeeeecCCCC
Q psy13969 418 L-AHCITGVYNEEME-LND---SAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 418 ~-~~~~~~v~~~~~~-~d~---~~l~~~~g~d~~~~~~~~~~ 454 (877)
+ ..|...|.+++|. .++ .+|+++ +.|+.+++|+..+
T Consensus 321 ~~~~h~~~v~~~~~~~~~g~~~~~l~s~-~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 321 LDSLHKNSVSQISVLSGGKAKCSQFCTT-GMDGGMSIWDVRS 361 (372)
T ss_dssp CSSSSSSCEEEEEEEESTTTSCSEEEEE-ETTSEEEEEEHHH
T ss_pred ccccccCCcceeEEecCCCcceeeEEEe-cCCCceEEEEecC
Confidence 2 2567789999866 554 777776 5899999998754
No 42
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-34 Score=321.22 Aligned_cols=240 Identities=17% Similarity=0.266 Sum_probs=203.6
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc---ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCe-
Q psy13969 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN---NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCT- 233 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~---~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~- 233 (877)
+...|++++|++++++||+++.|+.|+||++... .+..+..|...|++++|++++++|++++.|++|+|||+.+..
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT 89 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence 5678999999999999999999999999998764 566788999999999999999999999999999999998876
Q ss_pred --eeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCc---eeEEecc-CCCCeeEEEEccCCCeEEEEeCC
Q psy13969 234 --EEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQ---ALATLHA-HKSTVMDLAWNQNGNWLVTASRD 307 (877)
Q Consensus 234 --~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~---~~~~~~~-h~~~V~~l~~sp~g~~l~s~s~D 307 (877)
....+..|...|++++|++++++|++++.|+. |++||+++.+ .+..+.. |...|++|+|+|++++|++++.|
T Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 90 WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARV--ISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSC--EEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS
T ss_pred eeeeeEecccCCceEEEEECCCCCEEEEEecCCe--EEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC
Confidence 56777889999999999999999999999998 9999999876 4777777 99999999999999999999999
Q ss_pred CeEEEEEcCCC-----------------CcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCce----eE
Q psy13969 308 HLLKVFDIRNL-----------------SSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKE----VG 366 (877)
Q Consensus 308 g~I~iwd~~~~-----------------~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~----~~ 366 (877)
++|++||++.. ...+..+ .|...|++++|+|++. +|++++.|+.|+|||+.+.+. +.
T Consensus 168 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~ 245 (377)
T 3dwl_C 168 RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGN-ALAYAGHDSSVTIAYPSAPEQPPRALI 245 (377)
T ss_dssp SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSS-CEEEEETTTEEC-CEECSTTSCEEECC
T ss_pred CEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCC-EEEEEeCCCcEEEEECCCCCCcceeeE
Confidence 99999998621 2344455 8999999999999988 788999999999999999887 55
Q ss_pred EecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCC
Q psy13969 367 CIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRN 403 (877)
Q Consensus 367 ~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~ 403 (877)
.+ ..|...|++++|++++++|++++.|+.+ +|+..
T Consensus 246 ~~-~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 246 TV-KLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CE-ECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred ee-cCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 55 6789999999999999999998877666 66654
No 43
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.7e-33 Score=312.37 Aligned_cols=287 Identities=15% Similarity=0.253 Sum_probs=244.3
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcc-------eEEEccCCCCeeEEEEcCC----C---CEEEEEECCC
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNN-------VKTFQGHKESIRGISFSPS----D---SKFATCSDDG 222 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~-------~~~~~~h~~~V~~i~~sp~----~---~~l~sgs~Dg 222 (877)
+|...|++|+|++ ++|++++.|+.|+||++.... +..+..|...|++++|+++ + ++|++++.|+
T Consensus 14 ~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg 91 (397)
T 1sq9_A 14 AHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSG 91 (397)
T ss_dssp CSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTS
T ss_pred hhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCC
Confidence 6999999999998 899999999999999987655 7888999999999999999 8 9999999999
Q ss_pred cEEEEeccCCee-----eEEeccC-----CCCeEEEEEc----CCCCE-EEEEecCCcccEEEEcCCC------CceeE-
Q psy13969 223 TVRVWDFYRCTE-----EKVLRGH-----GADVKCVDWH----PYKSL-IVSGSKDNQQPVKLWDPKA------GQALA- 280 (877)
Q Consensus 223 ~I~iwd~~~~~~-----~~~l~~h-----~~~v~~v~~s----p~~~~-l~sgs~dg~~~I~iwd~~~------~~~~~- 280 (877)
.|++||+.+.+. +..+..| ...|.+++|+ +++++ |++++.|+. |++||+++ .+.+.
T Consensus 92 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~--i~iwd~~~~~~~~~~~~~~~ 169 (397)
T 1sq9_A 92 DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGT--TYIWKFHPFADESNSLTLNW 169 (397)
T ss_dssp CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSC--EEEEEEESSSSHHHHTTTCC
T ss_pred CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCc--EEEEeCCccccccccceeec
Confidence 999999988876 7888888 5899999999 99999 999999998 99999998 66665
Q ss_pred ----Ee-------ccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEec---C---CCCeEEEEEcCCCCc
Q psy13969 281 ----TL-------HAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRG---H---KKEASAVAWHPQHEG 343 (877)
Q Consensus 281 ----~~-------~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~---h---~~~v~~i~~~p~~~~ 343 (877)
.+ ..|...|++++|++++ +|++++.|+.|++||+++ ...+..+.. | ...|++++|+|++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~- 246 (397)
T 1sq9_A 170 SPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELST-LRPLYNFESQHSMINNSNSIRSVKFSPQGS- 246 (397)
T ss_dssp CCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTT-TEEEEEEECCC---CCCCCEEEEEECSSTT-
T ss_pred cCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCC-CceeEEEeccccccccCCccceEEECCCCC-
Confidence 66 4489999999999999 999999999999999998 577888888 8 99999999999987
Q ss_pred EEEEEeCC---CcEEEEEcCCCceeEEecCc-------------CCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCC
Q psy13969 344 LFSSGGAD---GSIMFWHVGADKEVGCIPQA-------------HDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGD 407 (877)
Q Consensus 344 ~l~sgs~d---g~I~iwd~~~~~~~~~~~~~-------------h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~ 407 (877)
+|++++.| +.|++||+++.+.+..+ .. |...|++++|++++++|++++.|+.|+|||+.....
T Consensus 247 ~l~~~~~d~~~g~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 247 LLAIAHDSNSFGCITLYETEFGERIGSL-SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEE-CBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEEEecCCCCceEEEEECCCCccccee-ccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 88899999 99999999999888887 55 899999999999999999999999999999976422
Q ss_pred CcccccccCCccee---------------eeeeeeeeccCCC----------CeEEeccCCCCeeeecCCC
Q psy13969 408 PMRDRYNQKGLAHC---------------ITGVYNEEMELND----------SAVIPGMGLEDEDSVFPSS 453 (877)
Q Consensus 408 ~~~~~~~~~~~~~~---------------~~~v~~~~~~~d~----------~~l~~~~g~d~~~~~~~~~ 453 (877)
. ........-..+ ...|.++.|++++ ..++++ +.|+.+++|+..
T Consensus 326 ~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~-~~dg~i~iw~~~ 394 (397)
T 1sq9_A 326 I-TTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCV-CLDRSIRWFREA 394 (397)
T ss_dssp E-EEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEE-ETTTEEEEEEEE
T ss_pred e-EEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEe-cCCCcEEEEEcC
Confidence 1 111100000022 6679999999987 566665 579999999764
No 44
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=8.5e-32 Score=295.70 Aligned_cols=241 Identities=21% Similarity=0.427 Sum_probs=206.1
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeee
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEE 235 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~ 235 (877)
.|...|++++|++++.+|++++.|++|+|||+... .+..+..|...|++|+|+|++++|++++.|++|+|||+... ..
T Consensus 74 ~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~ 152 (343)
T 2xzm_R 74 GHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CK 152 (343)
T ss_dssp CCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ce
Confidence 68899999999999999999999999999998764 56788899999999999999999999999999999999743 33
Q ss_pred EEec---cCCCCeEEEEEcCCC----------CEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEE
Q psy13969 236 KVLR---GHGADVKCVDWHPYK----------SLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLV 302 (877)
Q Consensus 236 ~~l~---~h~~~v~~v~~sp~~----------~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~ 302 (877)
..+. .|...|.+++|+|++ .+|++++.|+. |++||. +.+....+..|...|++++|+|++++|+
T Consensus 153 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~--i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~ 229 (343)
T 2xzm_R 153 FSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGR--LKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIA 229 (343)
T ss_dssp EECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSE--EEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred eeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCE--EEEEcC-CCceeEEEcCccccceEEEECCCCCEEE
Confidence 3333 688999999999986 78999999998 999994 5667778889999999999999999999
Q ss_pred EEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeE--Eec----------C
Q psy13969 303 TASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVG--CIP----------Q 370 (877)
Q Consensus 303 s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~--~~~----------~ 370 (877)
+++.|++|+|||++........+. +...|.+++|+|++. +++ ++.|+.|+|||+.+.+... .+. .
T Consensus 230 sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~-~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (343)
T 2xzm_R 230 TGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQ-WVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQK 306 (343)
T ss_dssp EEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSC-EEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBC
T ss_pred EEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCC-EEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhc
Confidence 999999999999965444555443 456799999999986 555 4568889999998765433 331 2
Q ss_pred cCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 371 AHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 371 ~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
.|...|++++|+|++++|++++.|++|++|++.+
T Consensus 307 ~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 307 GKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp CSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred CCCCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 5778899999999999999999999999999753
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.7e-31 Score=290.86 Aligned_cols=237 Identities=17% Similarity=0.337 Sum_probs=218.6
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcc---eEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCee
Q psy13969 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNN---VKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTE 234 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~---~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~ 234 (877)
|...|++++|++++++|++++.|+.|++|++.... ...+..|...|++++|++++++|++++.|+.|++||+.+.+.
T Consensus 96 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~ 175 (337)
T 1gxr_A 96 RDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL 175 (337)
T ss_dssp TTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCce
Confidence 67889999999999999999999999999987654 556788999999999999999999999999999999999999
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEE
Q psy13969 235 EKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD 314 (877)
Q Consensus 235 ~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd 314 (877)
+..+..|...|.+++|++++++|++++.|+. |++||+++.+.+..+ .|...|.+++|++++++|++++.|+.|++||
T Consensus 176 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~--i~~~d~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~ 252 (337)
T 1gxr_A 176 VRQFQGHTDGASCIDISNDGTKLWTGGLDNT--VRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLH 252 (337)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSE--EEEEETTTTEEEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeeeecccCceEEEEECCCCCEEEEEecCCc--EEEEECCCCceEeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 9999999999999999999999999999998 999999999887776 4788999999999999999999999999999
Q ss_pred cCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcC
Q psy13969 315 IRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSND 394 (877)
Q Consensus 315 ~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~d 394 (877)
++.. ....+..|...|.+++|++++. +|++++.|+.|++||+.+.+.+... .|...|++++|++++++|++++.|
T Consensus 253 ~~~~--~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d 327 (337)
T 1gxr_A 253 VNKP--DKYQLHLHESCVLSLKFAYCGK-WFVSTGKDNLLNAWRTPYGASIFQS--KESSSVLSCDISVDDKYIVTGSGD 327 (337)
T ss_dssp TTSS--CEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEE--ECSSCEEEEEECTTSCEEEEEETT
T ss_pred CCCC--CeEEEcCCccceeEEEECCCCC-EEEEecCCCcEEEEECCCCeEEEEe--cCCCcEEEEEECCCCCEEEEecCC
Confidence 9873 3567788999999999999988 8899999999999999998887554 688899999999999999999999
Q ss_pred CeEEEEeC
Q psy13969 395 HASKFWTR 402 (877)
Q Consensus 395 g~v~iwd~ 402 (877)
+.|++|++
T Consensus 328 g~i~iw~~ 335 (337)
T 1gxr_A 328 KKATVYEV 335 (337)
T ss_dssp SCEEEEEE
T ss_pred CeEEEEEE
Confidence 99999996
No 46
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=5.2e-33 Score=306.75 Aligned_cols=288 Identities=17% Similarity=0.306 Sum_probs=238.0
Q ss_pred eccCCEEEEEEcCC----CCEEEEEeCCCeEEEEeCCCc-ceEEEcc-----CCCCeeEEEEcCC----CCEEEEEECCC
Q psy13969 157 AHDCAVRHMVWSHN----GLWMVTSDHQGYIKYWQSNMN-NVKTFQG-----HKESIRGISFSPS----DSKFATCSDDG 222 (877)
Q Consensus 157 ~h~~~V~~l~~spd----~~~l~sg~~dg~v~iwd~~~~-~~~~~~~-----h~~~V~~i~~sp~----~~~l~sgs~Dg 222 (877)
.|...|++|+|+|+ ...+++++.++.|+||++... .+..+.. |...|++++|+++ +.+|++++.|+
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg 95 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG 95 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC
Confidence 58889999999984 456777777779999997743 3444432 6688999999998 66999999999
Q ss_pred cEEEEeccCCeeeEEeccCCCCeEEEEEcC-CCCEEEEEecCCcccEEEEcCCCCceeEEe---ccCCCCeeEEEEccCC
Q psy13969 223 TVRVWDFYRCTEEKVLRGHGADVKCVDWHP-YKSLIVSGSKDNQQPVKLWDPKAGQALATL---HAHKSTVMDLAWNQNG 298 (877)
Q Consensus 223 ~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp-~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~---~~h~~~V~~l~~sp~g 298 (877)
.|+|||+.+.+.+..+..|...|.+++|+| ++++|++++.|+. |++||+++++.+..+ ..|...|.+++|++++
T Consensus 96 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 173 (366)
T 3k26_A 96 IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHA--LRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG 173 (366)
T ss_dssp EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSC--EEEEETTTTEEEEEECSTTSCSSCEEEEEECTTS
T ss_pred EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCe--EEEEEeecCeEEEEecccccccCceeEEEECCCC
Confidence 999999999999999999999999999999 8999999999999 999999999988888 6899999999999999
Q ss_pred CeEEEEeCCCeEEEEEcCCCCcce----------------------------EEEecCCCCeEEEEEcCCCCcEEEEEeC
Q psy13969 299 NWLVTASRDHLLKVFDIRNLSSEV----------------------------QTFRGHKKEASAVAWHPQHEGLFSSGGA 350 (877)
Q Consensus 299 ~~l~s~s~Dg~I~iwd~~~~~~~~----------------------------~~~~~h~~~v~~i~~~p~~~~~l~sgs~ 350 (877)
++|++++.|+.|++||+++ ...+ .....|...|.+++|+ +. +|++++.
T Consensus 174 ~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~ 249 (366)
T 3k26_A 174 EKIMSCGMDHSLKLWRINS-KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD-LILSKSC 249 (366)
T ss_dssp SEEEEEETTSCEEEEESCS-HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT-EEEEECS
T ss_pred CEEEEecCCCCEEEEECCC-CccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CC-EEEEEec
Confidence 9999999999999999986 2222 2333499999999999 34 8999999
Q ss_pred CCcEEEEEcCCCce--------------eEEecCcCCCCEEEEEEcCC--CCEEEEEEcCCeEEEEeCCCCCCCcccccc
Q psy13969 351 DGSIMFWHVGADKE--------------VGCIPQAHDNIIWTMAWHPL--GHILATGSNDHASKFWTRNRLGDPMRDRYN 414 (877)
Q Consensus 351 dg~I~iwd~~~~~~--------------~~~~~~~h~~~V~~v~~sp~--g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~ 414 (877)
|+.|++||+.+... +..+ ..|...|++++|+++ +++|++++.|+.|++||+...... .....
T Consensus 250 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~ 327 (366)
T 3k26_A 250 ENAIVCWKPGKMEDDIDKIKPSESNVTILGRF-DYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPH-KAKCT 327 (366)
T ss_dssp SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEE-ECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGG-GCEEE
T ss_pred CCEEEEEeCCCccccccccccCCcchheeccc-cccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCc-cccce
Confidence 99999999987644 4444 578889999999999 999999999999999999764221 11111
Q ss_pred cCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCC
Q psy13969 415 QKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSS 453 (877)
Q Consensus 415 ~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~ 453 (877)
......+...|.++.|++++.+|+++. .|+.+++|+..
T Consensus 328 ~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~ 365 (366)
T 3k26_A 328 TLTHHKCGAAIRQTSFSRDSSILIAVC-DDASIWRWDRL 365 (366)
T ss_dssp EECCTTCCSCEEEEEECTTSSEEEEEE-TTSEEEEEEC-
T ss_pred EEcccccCCceEEEEeCCCCCeEEEEe-CCCEEEEEEec
Confidence 111112256799999999999998874 78899999764
No 47
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=7.6e-33 Score=304.49 Aligned_cols=293 Identities=14% Similarity=0.276 Sum_probs=239.8
Q ss_pred eccCCEEEEEEcCCCCEE-EEEeC---CCeEEEEeCCCcceE--EEccCCCCeeEEEEcCC---CCEEEEEECCCcEEEE
Q psy13969 157 AHDCAVRHMVWSHNGLWM-VTSDH---QGYIKYWQSNMNNVK--TFQGHKESIRGISFSPS---DSKFATCSDDGTVRVW 227 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l-~sg~~---dg~v~iwd~~~~~~~--~~~~h~~~V~~i~~sp~---~~~l~sgs~Dg~I~iw 227 (877)
+|...|++++|+|++..| ++++. |+.|+||++...... ....|...|++++|+++ +.+|++++.|+.|++|
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw 95 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIW 95 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEE
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEE
Confidence 588999999999988655 46665 999999998876543 33479999999999998 6999999999999999
Q ss_pred eccCCe-eeEEeccCCCCeEEEEE------cCCCCEEEEEecCCcccEEEEcCCCCc-eeEEeccCCC----CeeEEE--
Q psy13969 228 DFYRCT-EEKVLRGHGADVKCVDW------HPYKSLIVSGSKDNQQPVKLWDPKAGQ-ALATLHAHKS----TVMDLA-- 293 (877)
Q Consensus 228 d~~~~~-~~~~l~~h~~~v~~v~~------sp~~~~l~sgs~dg~~~I~iwd~~~~~-~~~~~~~h~~----~V~~l~-- 293 (877)
|+.+.+ .+..+..|...|.+++| ++++++|++++.|+. |++||+++.+ .+..+..|.. .|.+++
T Consensus 96 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~--i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 173 (357)
T 3i2n_A 96 NLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGT--VKVWDPRQKDDPVANMEPVQGENKRDCWTVAFG 173 (357)
T ss_dssp CTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSC--EEEECTTSCSSCSEEECCCTTSCCCCEEEEEEE
T ss_pred eCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCe--EEEEeCCCCCCcceeccccCCCCCCceEEEEEE
Confidence 999887 88889999999999955 678999999999999 9999999886 6778766655 799998
Q ss_pred --EccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcC---CCCcEEEEEeCCCcEEEEEcCCCceeEEe
Q psy13969 294 --WNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHP---QHEGLFSSGGADGSIMFWHVGADKEVGCI 368 (877)
Q Consensus 294 --~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p---~~~~~l~sgs~dg~I~iwd~~~~~~~~~~ 368 (877)
|++++++|++++.|+.|++||+++. . ......|...|.+++|+| ++. +|++++.|+.|++||+++.+.+..+
T Consensus 174 ~~~~~~~~~l~~~~~d~~i~i~d~~~~-~-~~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~ 250 (357)
T 3i2n_A 174 NAYNQEERVVCAGYDNGDIKLFDLRNM-A-LRWETNIKNGVCSLEFDRKDISMN-KLVATSLEGKFHVFDMRTQHPTKGF 250 (357)
T ss_dssp CCCC-CCCEEEEEETTSEEEEEETTTT-E-EEEEEECSSCEEEEEESCSSSSCC-EEEEEESTTEEEEEEEEEEETTTEE
T ss_pred eccCCCCCEEEEEccCCeEEEEECccC-c-eeeecCCCCceEEEEcCCCCCCCC-EEEEECCCCeEEEEeCcCCCcccce
Confidence 7889999999999999999999983 3 345567899999999999 666 8889999999999999876655443
Q ss_pred c----CcCCCCEEEEEEcCCCC-EEEEEEcCCeEEEEeCCCCCCCccc------------ccccCCcceeeeeeeeeecc
Q psy13969 369 P----QAHDNIIWTMAWHPLGH-ILATGSNDHASKFWTRNRLGDPMRD------------RYNQKGLAHCITGVYNEEME 431 (877)
Q Consensus 369 ~----~~h~~~V~~v~~sp~g~-~l~sg~~dg~v~iwd~~~~~~~~~~------------~~~~~~~~~~~~~v~~~~~~ 431 (877)
. ..|...|++++|+|++. +|++++.|+.|+|||++........ ......+..+...|.+++|+
T Consensus 251 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s 330 (357)
T 3i2n_A 251 ASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWS 330 (357)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEEC
T ss_pred eeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEc
Confidence 1 37999999999999998 8999999999999999764332110 01122334556679999999
Q ss_pred CCCCeEEeccCCCCeeeecCCCC
Q psy13969 432 LNDSAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 432 ~d~~~l~~~~g~d~~~~~~~~~~ 454 (877)
+++..++++.+.|+.+++|+..+
T Consensus 331 ~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 331 PDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp SSSTTEEEEEETTSEEEEEEECC
T ss_pred CCCCeEEEEecCCCcEEEEECCC
Confidence 99999985456899999998654
No 48
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-33 Score=313.85 Aligned_cols=287 Identities=15% Similarity=0.339 Sum_probs=240.7
Q ss_pred ccCCEEEEEEcCCCC-EEEEE----------eCCCeEEEEeCCCcc---eEEEccCCCCeeEEEEcCCCCEEEEEECCCc
Q psy13969 158 HDCAVRHMVWSHNGL-WMVTS----------DHQGYIKYWQSNMNN---VKTFQGHKESIRGISFSPSDSKFATCSDDGT 223 (877)
Q Consensus 158 h~~~V~~l~~spd~~-~l~sg----------~~dg~v~iwd~~~~~---~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~ 223 (877)
+...|.+++|+|+++ +|+++ +.|+.|+||++.... ......|...|++++|++++.+|++++.|+.
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 90 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGS 90 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCe
Confidence 334577788888876 88888 889999999987653 3333468999999999999999999999999
Q ss_pred EEEEeccC----CeeeEEeccCCCCeEEEEEcCC-CCEEEEEecCCcccEEEEcCCCCc------eeE---EeccCCCCe
Q psy13969 224 VRVWDFYR----CTEEKVLRGHGADVKCVDWHPY-KSLIVSGSKDNQQPVKLWDPKAGQ------ALA---TLHAHKSTV 289 (877)
Q Consensus 224 I~iwd~~~----~~~~~~l~~h~~~v~~v~~sp~-~~~l~sgs~dg~~~I~iwd~~~~~------~~~---~~~~h~~~V 289 (877)
|+|||+.+ .+.+..+..|...|++++|+++ +++|++++.|+. |++||+++.+ ... .+..|...|
T Consensus 91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v 168 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGE--IFIWDMNKCTESPSNYTPLTPGQSMSSVDEV 168 (416)
T ss_dssp EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSC--EEBCBTTTTSSCTTTCCCBCCCCSCCSSCCC
T ss_pred EEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCe--EEEEECCCCccccccccccccccccCCCCCe
Confidence 99999987 4578888899999999999998 899999999999 9999999876 332 336789999
Q ss_pred eEEEEccC-CCeEEEEeCCCeEEEEEcCCCCcceEEEecC------CCCeEEEEEcCCCCcEEEEEeCCC---cEEEEEc
Q psy13969 290 MDLAWNQN-GNWLVTASRDHLLKVFDIRNLSSEVQTFRGH------KKEASAVAWHPQHEGLFSSGGADG---SIMFWHV 359 (877)
Q Consensus 290 ~~l~~sp~-g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h------~~~v~~i~~~p~~~~~l~sgs~dg---~I~iwd~ 359 (877)
.+++|+++ +.+|++++.|+.|+|||++. ...+..+..| ...|++++|+|++..+|++++.|+ .|++||+
T Consensus 169 ~~~~~~~~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~ 247 (416)
T 2pm9_A 169 ISLAWNQSLAHVFASAGSSNFASIWDLKA-KKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDL 247 (416)
T ss_dssp CEEEECSSCTTEEEEESSSSCEEEEETTT-TEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEET
T ss_pred eEEEeCCCCCcEEEEEcCCCCEEEEECCC-CCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeC
Confidence 99999998 78999999999999999998 5667777766 789999999999877999999999 9999999
Q ss_pred CCC-ceeEEecC-cCCCCEEEEEEcC-CCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCC-C
Q psy13969 360 GAD-KEVGCIPQ-AHDNIIWTMAWHP-LGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELND-S 435 (877)
Q Consensus 360 ~~~-~~~~~~~~-~h~~~V~~v~~sp-~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~-~ 435 (877)
++. ..+..+ . .|...|++++|+| ++.+|++++.|+.|++||+..... ...+..+...+.++.|++++ .
T Consensus 248 ~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~-------~~~~~~~~~~v~~~~~s~~~~~ 319 (416)
T 2pm9_A 248 RNANTPLQTL-NQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ-------LSQFPARGNWCFKTKFAPEAPD 319 (416)
T ss_dssp TSTTSCSBCC-CSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE-------EEEEECSSSCCCCEEECTTCTT
T ss_pred CCCCCCcEEe-ecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc-------ceeecCCCCceEEEEECCCCCC
Confidence 986 444444 5 7999999999999 899999999999999999876321 12233455678899999998 5
Q ss_pred eEEeccCCCCeeeecCCCCcc
Q psy13969 436 AVIPGMGLEDEDSVFPSSEPL 456 (877)
Q Consensus 436 ~l~~~~g~d~~~~~~~~~~~~ 456 (877)
.++++ +.|+.+++|+.....
T Consensus 320 ~l~s~-~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 320 LFACA-SFDNKIEVQTLQNLT 339 (416)
T ss_dssp EEEEC-CSSSEEEEEESCCCC
T ss_pred EEEEE-ecCCcEEEEEccCCC
Confidence 66665 579999999887543
No 49
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.7e-32 Score=302.30 Aligned_cols=284 Identities=17% Similarity=0.233 Sum_probs=227.5
Q ss_pred eeccCCEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCcceE-EEc--cCCCCeeEEEEcC-CCCEEEEEECCCcEEEEecc
Q psy13969 156 LAHDCAVRHMVWSHNG-LWMVTSDHQGYIKYWQSNMNNVK-TFQ--GHKESIRGISFSP-SDSKFATCSDDGTVRVWDFY 230 (877)
Q Consensus 156 l~h~~~V~~l~~spd~-~~l~sg~~dg~v~iwd~~~~~~~-~~~--~h~~~V~~i~~sp-~~~~l~sgs~Dg~I~iwd~~ 230 (877)
..|...|++++|++++ ++|++++.|+.|+|||+...... .+. .|...|++++|++ ++++|++++.|++|++||+.
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 149 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS 149 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC
Confidence 3688999999999998 99999999999999998765443 333 6999999999999 67999999999999999998
Q ss_pred CCeeeEEeccC---CCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCC-eEEEEeC
Q psy13969 231 RCTEEKVLRGH---GADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGN-WLVTASR 306 (877)
Q Consensus 231 ~~~~~~~l~~h---~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~-~l~s~s~ 306 (877)
. ..+..+..+ ...|.+++|++++++|++++.|+. |++||+ +++.+..+..|...|.+|+|++++. +|++++.
T Consensus 150 ~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 225 (383)
T 3ei3_B 150 G-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGR--LLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSV 225 (383)
T ss_dssp S-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSE--EEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEET
T ss_pred C-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCC--EEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeC
Confidence 6 555555444 478999999999999999999998 999999 5778889999999999999999998 8999999
Q ss_pred CCeEEEEEcCCCC---cceEEEecCCCCeEEEEEcC-CCCcEEEEEeCCCcEEEEEcCCCceeEEec------CcCC---
Q psy13969 307 DHLLKVFDIRNLS---SEVQTFRGHKKEASAVAWHP-QHEGLFSSGGADGSIMFWHVGADKEVGCIP------QAHD--- 373 (877)
Q Consensus 307 Dg~I~iwd~~~~~---~~~~~~~~h~~~v~~i~~~p-~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~------~~h~--- 373 (877)
|++|+|||+++.. ..+..+ .|...|++++|+| ++. +|++++.|+.|+|||+++.+.+..+. ..|.
T Consensus 226 d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 303 (383)
T 3ei3_B 226 DATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDST-KLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPI 303 (383)
T ss_dssp TSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSC-EEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCC
T ss_pred CCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCC-EEEEEcCCCcEEEEECCCCccccccccccccccccccce
Confidence 9999999998632 334444 6999999999999 776 88999999999999999877655542 1122
Q ss_pred -------CCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCe
Q psy13969 374 -------NIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDE 446 (877)
Q Consensus 374 -------~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~ 446 (877)
..+..++|++++++ +++.|+.|+|||+.+... +.... ...+...+..++|++++.+|++++ |+.
T Consensus 304 ~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~-~~~l~----~~~~~~~~~~~~~s~~g~~l~s~s--d~~ 374 (383)
T 3ei3_B 304 KATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGL-VHQLR----DPNAAGIISLNKFSPTGDVLASGM--GFN 374 (383)
T ss_dssp CCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCE-EEEEC----BTTBCSCCCEEEECTTSSEEEEEE--TTE
T ss_pred EEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCce-eeeec----CCCCCceEEEEEEecCccEEEEec--CCc
Confidence 23444666666655 667899999999976432 11111 111334456669999999999884 899
Q ss_pred eeecCCCC
Q psy13969 447 DSVFPSSE 454 (877)
Q Consensus 447 ~~~~~~~~ 454 (877)
+++|+..+
T Consensus 375 i~iw~~~~ 382 (383)
T 3ei3_B 375 ILIWNRED 382 (383)
T ss_dssp EEEEECC-
T ss_pred EEEEecCC
Confidence 99998754
No 50
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.6e-33 Score=312.02 Aligned_cols=282 Identities=15% Similarity=0.216 Sum_probs=234.9
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceE-EEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEec
Q psy13969 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVK-TFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLR 239 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~-~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~ 239 (877)
.+++++|+|++++|++++.|+.|++|++...... .+..| ..+....|++++++|++++.|+.|+|||+.+.+....+.
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 136 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ 136 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc
Confidence 3557899999999999999999999998764432 33344 455566789999999999999999999999998888888
Q ss_pred cCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCC
Q psy13969 240 GHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLS 319 (877)
Q Consensus 240 ~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~ 319 (877)
.|...|++++|+|++++|++++.|+. |++||+++++.+..+..|...|++++|++++++|++++.|++|++||+++ .
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~d~~--i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~-~ 213 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQDMQ--LKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGT-G 213 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSE--EEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT-T
T ss_pred cccCccEEEEECCCCCEEEEEeCCCe--EEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC-C
Confidence 99999999999999999999999998 99999999999999999999999999999999999999999999999997 5
Q ss_pred cceEEEec---CCCCeEEEE---------------------EcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCC
Q psy13969 320 SEVQTFRG---HKKEASAVA---------------------WHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNI 375 (877)
Q Consensus 320 ~~~~~~~~---h~~~v~~i~---------------------~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~ 375 (877)
..+..+.. |...|.+++ |+|++. +|++++.|+.|+|||+++.+.+..+...|...
T Consensus 214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 292 (420)
T 3vl1_A 214 TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK-YVIAGHVSGVITVHNVFSKEQTIQLPSKFTCS 292 (420)
T ss_dssp EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE-EEEEEETTSCEEEEETTTCCEEEEECCTTSSC
T ss_pred ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC-EEEEEcCCCeEEEEECCCCceeEEcccccCCC
Confidence 66666664 344555555 466666 88999999999999999999888887778999
Q ss_pred EEEEEEcCCCC-EEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCC
Q psy13969 376 IWTMAWHPLGH-ILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 376 V~~v~~sp~g~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~ 454 (877)
|++++|++++. +|++++.|+.|++||+......+..... ++...+..+.+. ++..++++ +.|+.+++|+...
T Consensus 293 v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~-----~~~~~v~~~~~~-~~~~l~s~-~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI-----NEGTPINNVYFA-AGALFVSS-GFDTSIKLDIISD 365 (420)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE-----STTSCEEEEEEE-TTEEEEEE-TTTEEEEEEEECC
T ss_pred ceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc-----cCCCCceEEEeC-CCCEEEEe-cCCccEEEEeccC
Confidence 99999999998 9999999999999999875443222111 123346666555 56666665 5789999998765
No 51
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=9.2e-32 Score=293.67 Aligned_cols=247 Identities=19% Similarity=0.354 Sum_probs=215.6
Q ss_pred eeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-----ceEEEccCCCCeeEEEEcC--CCCEEEEEECCCcEEEEe
Q psy13969 156 LAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-----NVKTFQGHKESIRGISFSP--SDSKFATCSDDGTVRVWD 228 (877)
Q Consensus 156 l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-----~~~~~~~h~~~V~~i~~sp--~~~~l~sgs~Dg~I~iwd 228 (877)
.+|...|++|+|++++++|++++.|+.|+||++... .+..+..|...|++|+|++ ++++|++++.|++|+|||
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 369999999999999999999999999999997753 4566789999999999999 589999999999999999
Q ss_pred ccCC---------eeeEEeccCCCCeEEEEEcCC--CCEEEEEecCCcccEEEEcCCCCceeEEec-------------c
Q psy13969 229 FYRC---------TEEKVLRGHGADVKCVDWHPY--KSLIVSGSKDNQQPVKLWDPKAGQALATLH-------------A 284 (877)
Q Consensus 229 ~~~~---------~~~~~l~~h~~~v~~v~~sp~--~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~-------------~ 284 (877)
+.+. +.+..+..|...|.+++|+++ +++|++++.|+. |++||+++.+.+..+. .
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGI--LRLYDALEPSDLRSWTLTSEMKVLSIPPAN 165 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCE--EEEEECSSTTCTTCCEEEEEEESCSCCCSS
T ss_pred cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCc--EEEecCCChHHhccccccccccccccccCC
Confidence 9876 557788889999999999999 999999999998 9999999876544332 5
Q ss_pred CCCCeeEEEEccC---CCeEEEEeCCCeEEEEEcCCCC-cceEEEecCCCCeEEEEEcCCCC---cEEEEEeCCCcEEEE
Q psy13969 285 HKSTVMDLAWNQN---GNWLVTASRDHLLKVFDIRNLS-SEVQTFRGHKKEASAVAWHPQHE---GLFSSGGADGSIMFW 357 (877)
Q Consensus 285 h~~~V~~l~~sp~---g~~l~s~s~Dg~I~iwd~~~~~-~~~~~~~~h~~~v~~i~~~p~~~---~~l~sgs~dg~I~iw 357 (877)
|...|.+++|+|+ +.+|++++.|+.+.+|+..... ..+..+..|...|++++|+|++. .+|++++.|+.|+||
T Consensus 166 ~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iw 245 (351)
T 3f3f_A 166 HLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIF 245 (351)
T ss_dssp CSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEE
T ss_pred cccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEE
Confidence 7889999999997 8999999999999888776532 12667788999999999999973 489999999999999
Q ss_pred EcCCC----------------------------------------------ceeEEecCcCCCCEEEEEEcCCCCEEEEE
Q psy13969 358 HVGAD----------------------------------------------KEVGCIPQAHDNIIWTMAWHPLGHILATG 391 (877)
Q Consensus 358 d~~~~----------------------------------------------~~~~~~~~~h~~~V~~v~~sp~g~~l~sg 391 (877)
|++.. +.+..+ ..|...|++++|++++++|+++
T Consensus 246 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~ 324 (351)
T 3f3f_A 246 KITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEH-DDHNGEVWSVSWNLTGTILSSA 324 (351)
T ss_dssp EEEECC---------------------------------------CCSEEEEEEEEE-CTTSSCEEEEEECSSSCCEEEE
T ss_pred eCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEE-ecccccEEEEEEcCCCCEEEEe
Confidence 99764 344444 6799999999999999999999
Q ss_pred EcCCeEEEEeCCCC
Q psy13969 392 SNDHASKFWTRNRL 405 (877)
Q Consensus 392 ~~dg~v~iwd~~~~ 405 (877)
+.|+.|+||+++..
T Consensus 325 ~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 325 GDDGKVRLWKATYS 338 (351)
T ss_dssp ETTSCEEEEEECTT
T ss_pred cCCCcEEEEecCcC
Confidence 99999999999753
No 52
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-31 Score=297.35 Aligned_cols=248 Identities=23% Similarity=0.422 Sum_probs=217.1
Q ss_pred eeeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC---cceEEEccCCCCeeEEEEcCC--CCEEEEEECCCcEEEEec
Q psy13969 155 RLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM---NNVKTFQGHKESIRGISFSPS--DSKFATCSDDGTVRVWDF 229 (877)
Q Consensus 155 ~l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~---~~~~~~~~h~~~V~~i~~sp~--~~~l~sgs~Dg~I~iwd~ 229 (877)
+-+|...|++++|++++++||+++.|+.|+||++.. ..+..+..|...|++|+|+++ +++|++++.|++|+|||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~ 86 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 86 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEE
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEc
Confidence 347999999999999999999999999999999753 345678899999999999987 899999999999999999
Q ss_pred cCCe--eeEEeccCCCCeEEEEEcCC--CCEEEEEecCCcccEEEEcCCCCc--eeEEeccCCCCeeEEEEcc-------
Q psy13969 230 YRCT--EEKVLRGHGADVKCVDWHPY--KSLIVSGSKDNQQPVKLWDPKAGQ--ALATLHAHKSTVMDLAWNQ------- 296 (877)
Q Consensus 230 ~~~~--~~~~l~~h~~~v~~v~~sp~--~~~l~sgs~dg~~~I~iwd~~~~~--~~~~~~~h~~~V~~l~~sp------- 296 (877)
.+.+ .+..+..|...|.+++|+++ +.+|++++.|+. |++||+++.. ....+..|...|++++|+|
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~--i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 164 (379)
T 3jrp_A 87 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGK--VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 164 (379)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSE--EEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-----
T ss_pred CCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCc--EEEEecCCCCceeeEEecCCCCceEEEEEcCccccccc
Confidence 9886 67778889999999999999 899999999998 9999999873 4456678999999999999
Q ss_pred ------CCCeEEEEeCCCeEEEEEcCCCCc---ceEEEecCCCCeEEEEEcCCC--CcEEEEEeCCCcEEEEEcCCCce-
Q psy13969 297 ------NGNWLVTASRDHLLKVFDIRNLSS---EVQTFRGHKKEASAVAWHPQH--EGLFSSGGADGSIMFWHVGADKE- 364 (877)
Q Consensus 297 ------~g~~l~s~s~Dg~I~iwd~~~~~~---~~~~~~~h~~~v~~i~~~p~~--~~~l~sgs~dg~I~iwd~~~~~~- 364 (877)
++.+|++++.|+.|+|||++.... .+..+..|...|++++|+|++ ..+|++++.|+.|+|||+.+...
T Consensus 165 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 244 (379)
T 3jrp_A 165 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP 244 (379)
T ss_dssp -----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred cccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCcc
Confidence 699999999999999999986432 445778899999999999994 44899999999999999988641
Q ss_pred --eEE-ecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 365 --VGC-IPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 365 --~~~-~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
... ....|...|++++|++++++|++++.|+.|+||+++.
T Consensus 245 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 245 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp CEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred ceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 111 1234888999999999999999999999999999864
No 53
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-32 Score=317.65 Aligned_cols=308 Identities=12% Similarity=0.077 Sum_probs=223.2
Q ss_pred cCCeEEEEEccCC---------ceeeccCCE-EEEEEcCCCCEEEEEeCCCeEEEEeCCCcce-----EEEccCCCCeeE
Q psy13969 141 RCPIFSMTWTPEG---------RRLAHDCAV-RHMVWSHNGLWMVTSDHQGYIKYWQSNMNNV-----KTFQGHKESIRG 205 (877)
Q Consensus 141 ~~~i~~~~~sp~g---------~~l~h~~~V-~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~-----~~~~~h~~~V~~ 205 (877)
...|++++|+|+. ++|+....- .....++++++|++++.|++|+||+++...+ ..+..|...|++
T Consensus 133 ~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~ 212 (524)
T 2j04_B 133 GGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWD 212 (524)
T ss_dssp CC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEE
T ss_pred CCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEE
Confidence 4578899999986 555421100 0012567888899999999999999766543 346678899999
Q ss_pred EEEcCC------CCEEEEEECCCcEEEEeccCCee-----------eEEeccCCCCeEEEEEcCCCCEEEEEecCCcccE
Q psy13969 206 ISFSPS------DSKFATCSDDGTVRVWDFYRCTE-----------EKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPV 268 (877)
Q Consensus 206 i~~sp~------~~~l~sgs~Dg~I~iwd~~~~~~-----------~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I 268 (877)
|+|+|+ +.+||+++.|++|+|||+.+... ...+..|...|++++|+++ .+|++|+.|++ |
T Consensus 213 v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~Dgt--V 289 (524)
T 2j04_B 213 LKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGF--V 289 (524)
T ss_dssp EEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSE--E
T ss_pred EEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCE--E
Confidence 999996 57999999999999999976532 2467789999999999986 58999999999 9
Q ss_pred EEEcCCCC-ceeEEeccCCCCeeEE--EEccCC-CeEEEEeCCCeEEEEEcCCCCcceEEEecCCC--CeEEEEEcCCCC
Q psy13969 269 KLWDPKAG-QALATLHAHKSTVMDL--AWNQNG-NWLVTASRDHLLKVFDIRNLSSEVQTFRGHKK--EASAVAWHPQHE 342 (877)
Q Consensus 269 ~iwd~~~~-~~~~~~~~h~~~V~~l--~~sp~g-~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~--~v~~i~~~p~~~ 342 (877)
++||+++. .....+..|...|++| +|++++ .+||+++.|++|+|||+++ ...+.++..|.. .|.+|+|+|++.
T Consensus 290 ~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~-~~~~~~~~~~~~~~~v~~v~fsp~~~ 368 (524)
T 2j04_B 290 AEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD-IATTKTTVSRFRGSNLVPVVYCPQIY 368 (524)
T ss_dssp EEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG-HHHHCEEEEECSCCSCCCEEEETTTT
T ss_pred EEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC-CCcccccccccccCcccceEeCCCcC
Confidence 99999976 4456788999999999 567887 8999999999999999987 455556666653 588999999987
Q ss_pred cEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCc-------------
Q psy13969 343 GLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPM------------- 409 (877)
Q Consensus 343 ~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~------------- 409 (877)
.|++++.|++|+|||+++..++..+ ..|...|++|+|+|++.+|++++.|++|+|||+...-...
T Consensus 369 -~l~s~~~d~tv~lwd~~~~~~~~~l-~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v 446 (524)
T 2j04_B 369 -SYIYSDGASSLRAVPSRAAFAVHPL-VSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRL 446 (524)
T ss_dssp -EEEEECSSSEEEEEETTCTTCCEEE-EECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEE
T ss_pred -eEEEeCCCCcEEEEECcccccceee-ecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEE
Confidence 6889999999999999998887776 5799999999999999999999999999999975320000
Q ss_pred -ccc-----------------------cccCCcceeeeeeeeeeccCCCC---eEEeccCCCCeeeecCCCCc
Q psy13969 410 -RDR-----------------------YNQKGLAHCITGVYNEEMELNDS---AVIPGMGLEDEDSVFPSSEP 455 (877)
Q Consensus 410 -~~~-----------------------~~~~~~~~~~~~v~~~~~~~d~~---~l~~~~g~d~~~~~~~~~~~ 455 (877)
... .....+..+...|++++|+++.. .++++ ..++.++||....+
T Consensus 447 ~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg-~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 447 WKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFS-NSAGLLTLEYLSLE 518 (524)
T ss_dssp EECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEE-CTTSEEEEEECSCC
T ss_pred EEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhh-ccCceEEEEEcccc
Confidence 000 00111223455678888888754 45554 46788888876543
No 54
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.3e-32 Score=297.53 Aligned_cols=240 Identities=17% Similarity=0.354 Sum_probs=212.0
Q ss_pred ccCCEEEEEEcCC----CCEEEEEeCCCeEEEEeCCC-cceEEEccCCCCeeEEEEcC-CCCEEEEEECCCcEEEEeccC
Q psy13969 158 HDCAVRHMVWSHN----GLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFSP-SDSKFATCSDDGTVRVWDFYR 231 (877)
Q Consensus 158 h~~~V~~l~~spd----~~~l~sg~~dg~v~iwd~~~-~~~~~~~~h~~~V~~i~~sp-~~~~l~sgs~Dg~I~iwd~~~ 231 (877)
|...|++++|+++ +.+|++++.|+.|+|||+.. ..+..+..|...|++++|++ ++++|++++.|++|+|||+.+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 5678999999998 67999999999999999775 45667888999999999999 899999999999999999999
Q ss_pred CeeeEEe---ccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEec-------------------------
Q psy13969 232 CTEEKVL---RGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLH------------------------- 283 (877)
Q Consensus 232 ~~~~~~l---~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~------------------------- 283 (877)
.+.+..+ ..|...|.+++|++++++|++++.|+. |++||+++.+.+..+.
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHS--LKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS 225 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSC--EEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEE
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCCC--EEEEECCCCccccccceeEEecCCCCcccccceeeccCccc
Confidence 9988888 689999999999999999999999998 9999999876544333
Q ss_pred ---cCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCc-------------ceEEEecCCCCeEEEEEcCC--CCcEE
Q psy13969 284 ---AHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSS-------------EVQTFRGHKKEASAVAWHPQ--HEGLF 345 (877)
Q Consensus 284 ---~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~-------------~~~~~~~h~~~v~~i~~~p~--~~~~l 345 (877)
.|...|.+++|+ +++|++++.|+.|++||+++... .+..+..|...|++++|+++ +. +|
T Consensus 226 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-~l 302 (366)
T 3k26_A 226 TRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK-ML 302 (366)
T ss_dssp ECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS-EE
T ss_pred cccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc-EE
Confidence 399999999999 77999999999999999987432 36778889999999999999 76 89
Q ss_pred EEEeCCCcEEEEEcCCCcee----EEecCcC--CCCEEEEEEcCCCCEEEEEEcCCeEEEEeCC
Q psy13969 346 SSGGADGSIMFWHVGADKEV----GCIPQAH--DNIIWTMAWHPLGHILATGSNDHASKFWTRN 403 (877)
Q Consensus 346 ~sgs~dg~I~iwd~~~~~~~----~~~~~~h--~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~ 403 (877)
++++.|+.|+|||+.+.+.+ ..+ ..| ...|++++|++++++|++++.|+.|+|||+.
T Consensus 303 ~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 303 ALGNQVGKLYVWDLEVEDPHKAKCTTL-THHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEECTTSCEEEEECCSSSGGGCEEEEE-CCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEEecCCcEEEEECCCCCCccccceEE-cccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 99999999999999987543 244 455 7899999999999999999999999999985
No 55
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=5.3e-32 Score=308.10 Aligned_cols=290 Identities=16% Similarity=0.326 Sum_probs=229.0
Q ss_pred eeeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcc------------eEEEccCC------------CCeeEEEEcC
Q psy13969 155 RLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNN------------VKTFQGHK------------ESIRGISFSP 210 (877)
Q Consensus 155 ~l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~------------~~~~~~h~------------~~V~~i~~sp 210 (877)
.+.|...|++|+|++++++||+++.|+.|+||++.... +..+.+|. ..|++|+|++
T Consensus 24 ~~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 24 DVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp CCCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred cccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC
Confidence 35678999999999999999999999999999977544 66788998 8899999999
Q ss_pred CC--CEEEEEECCCcEEEEeccCCeee---------------------------------------EE-eccCCCCeEEE
Q psy13969 211 SD--SKFATCSDDGTVRVWDFYRCTEE---------------------------------------KV-LRGHGADVKCV 248 (877)
Q Consensus 211 ~~--~~l~sgs~Dg~I~iwd~~~~~~~---------------------------------------~~-l~~h~~~v~~v 248 (877)
++ .+|++++.|++|+|||+.+.... .. +..|...|+++
T Consensus 104 ~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 98 79999999999999999764332 12 35799999999
Q ss_pred EEcCCCCEEEEEecCCcccEEEEcCCC-CceeE-------EeccCCCCeeEEEEccCC-CeEEEEeCCCeEEEEEcCCCC
Q psy13969 249 DWHPYKSLIVSGSKDNQQPVKLWDPKA-GQALA-------TLHAHKSTVMDLAWNQNG-NWLVTASRDHLLKVFDIRNLS 319 (877)
Q Consensus 249 ~~sp~~~~l~sgs~dg~~~I~iwd~~~-~~~~~-------~~~~h~~~V~~l~~sp~g-~~l~s~s~Dg~I~iwd~~~~~ 319 (877)
+|++++++|+++ .|+. |++||+++ .+.+. .+..|...|++++|+|++ ++|++++.|++|+|||+++..
T Consensus 184 ~~~~~~~~l~s~-~d~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 260 (447)
T 3dw8_B 184 SINSDYETYLSA-DDLR--INLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASA 260 (447)
T ss_dssp EECTTSSEEEEE-CSSE--EEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCS
T ss_pred EEcCCCCEEEEe-CCCe--EEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCc
Confidence 999999999998 7988 99999994 44444 256899999999999998 999999999999999999843
Q ss_pred c---ceEEEecCCC------------CeEEEEEcCCCCcEEEEEeCCCcEEEEEcCC-CceeEEecCcCCCC--------
Q psy13969 320 S---EVQTFRGHKK------------EASAVAWHPQHEGLFSSGGADGSIMFWHVGA-DKEVGCIPQAHDNI-------- 375 (877)
Q Consensus 320 ~---~~~~~~~h~~------------~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~-~~~~~~~~~~h~~~-------- 375 (877)
. .+..+..|.. .|++++|+|++. +|++++. +.|+|||+++ .+.+..+ ..|...
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~~v~iwd~~~~~~~~~~~-~~~~~~~~~l~~~~ 337 (447)
T 3dw8_B 261 LCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-LSVKVWDLNMENRPVETY-QVHEYLRSKLCSLY 337 (447)
T ss_dssp SSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-SEEEEEETTCCSSCSCCE-ESCGGGTTTHHHHH
T ss_pred cccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-CeEEEEeCCCCcccccee-eccccccccccccc
Confidence 2 1678888876 899999999988 7888888 9999999987 6666666 455421
Q ss_pred -------EEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCccccc----------cc---------------CCcceeee
Q psy13969 376 -------IWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRY----------NQ---------------KGLAHCIT 423 (877)
Q Consensus 376 -------V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~----------~~---------------~~~~~~~~ 423 (877)
+.+++|++++.+|++++.|+.|+|||+........... .. ........
T Consensus 338 ~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (447)
T 3dw8_B 338 ENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNK 417 (447)
T ss_dssp HTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTS
T ss_pred cccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCC
Confidence 34599999999999999999999999976432110000 00 00112234
Q ss_pred eeeeeeccCCCCeEEeccCCCCeeeecCC
Q psy13969 424 GVYNEEMELNDSAVIPGMGLEDEDSVFPS 452 (877)
Q Consensus 424 ~v~~~~~~~d~~~l~~~~g~d~~~~~~~~ 452 (877)
.+..++|++++..|++++ .+.+++|..
T Consensus 418 ~i~~~~~~p~~~~la~~~--~~~~~~~~~ 444 (447)
T 3dw8_B 418 KILHTAWHPKENIIAVAT--TNNLYIFQD 444 (447)
T ss_dssp CCCEEEECSSSSEEEEEC--SSCEEEEEC
T ss_pred ceeEEEECCCCCEEEEEe--cceeeeecc
Confidence 577899999999998875 345667643
No 56
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.8e-31 Score=295.40 Aligned_cols=243 Identities=17% Similarity=0.269 Sum_probs=212.8
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcc---eEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCe
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNN---VKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCT 233 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~---~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~ 233 (877)
.|...|++++|++++++|++++.|+.|++||+.... ...+..|...|++++|++++++|++++.|+.|++||+....
T Consensus 50 ~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 50 EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTT
T ss_pred CCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCC
Confidence 589999999999999999999999999999987654 33447799999999999999999999999999999998765
Q ss_pred e----eEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCC------------------CCceeEEeccCCCCeeE
Q psy13969 234 E----EKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPK------------------AGQALATLHAHKSTVMD 291 (877)
Q Consensus 234 ~----~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~------------------~~~~~~~~~~h~~~V~~ 291 (877)
. ......|...|.+++|++++++|++++.|+. |++||++ +++.+..+..|...|.+
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 207 (372)
T 1k8k_C 130 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFK--CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHG 207 (372)
T ss_dssp TEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSC--EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEE
T ss_pred cceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCC--EEEEEcccccccccccccccccccchhhheEecCCCCCeEEE
Confidence 2 3334668999999999999999999999999 9999954 67788889899999999
Q ss_pred EEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCC--Cce-----
Q psy13969 292 LAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGA--DKE----- 364 (877)
Q Consensus 292 l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~--~~~----- 364 (877)
++|++++++|++++.|+.|++||+++ ...+..+..|...|++++|++++. +|+++ .|+.|++|++.. +..
T Consensus 208 ~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~d~~i~i~~~~~~~~~~~~~~~ 284 (372)
T 1k8k_C 208 VCFSANGSRVAWVSHDSTVCLADADK-KMAVATLASETLPLLAVTFITESS-LVAAG-HDCFPVLFTYDSAAGKLSFGGR 284 (372)
T ss_dssp EEECSSSSEEEEEETTTEEEEEEGGG-TTEEEEEECSSCCEEEEEEEETTE-EEEEE-TTSSCEEEEEETTTTEEEECCC
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCC-CceeEEEccCCCCeEEEEEecCCC-EEEEE-eCCeEEEEEccCcCceEEEeec
Confidence 99999999999999999999999988 577888999999999999999987 66666 899999999987 320
Q ss_pred ---------------------------e------EEecCcCCCCEEEEEEc-CCC---CEEEEEEcCCeEEEEeCCC
Q psy13969 365 ---------------------------V------GCIPQAHDNIIWTMAWH-PLG---HILATGSNDHASKFWTRNR 404 (877)
Q Consensus 365 ---------------------------~------~~~~~~h~~~V~~v~~s-p~g---~~l~sg~~dg~v~iwd~~~ 404 (877)
. ..+...|...|++++|+ +++ .+|++++.|+.|+||++..
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 285 LDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp CCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred cCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 0 23334899999999976 666 9999999999999999865
No 57
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-31 Score=289.39 Aligned_cols=260 Identities=18% Similarity=0.336 Sum_probs=230.7
Q ss_pred CccCCeEEEEEccCCcee------------------------eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceE
Q psy13969 139 KMRCPIFSMTWTPEGRRL------------------------AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVK 194 (877)
Q Consensus 139 ~~~~~i~~~~~sp~g~~l------------------------~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~ 194 (877)
.+...|.+++|++++++| .|...|++++|++++++|++++.|+.|++||+......
T Consensus 30 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 109 (369)
T 3zwl_B 30 GHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCV 109 (369)
T ss_dssp CCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred EeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 356779999999998877 38899999999999999999999999999998876655
Q ss_pred EEccCCCCeeEEEEcCCCCEEEEEECC-----CcEEEEeccCCe-----------eeEEeccCCC--CeEEEEEcCCCCE
Q psy13969 195 TFQGHKESIRGISFSPSDSKFATCSDD-----GTVRVWDFYRCT-----------EEKVLRGHGA--DVKCVDWHPYKSL 256 (877)
Q Consensus 195 ~~~~h~~~V~~i~~sp~~~~l~sgs~D-----g~I~iwd~~~~~-----------~~~~l~~h~~--~v~~v~~sp~~~~ 256 (877)
....|...|.+++|++++++|++++.+ +.|++||+.+.. .+..+..|.. .|.+++|++++++
T Consensus 110 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (369)
T 3zwl_B 110 ATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKY 189 (369)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCE
T ss_pred EEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCE
Confidence 444599999999999999999999999 999999987543 3344555665 8999999999999
Q ss_pred EEEEecCCcccEEEEcCCC-CceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEE
Q psy13969 257 IVSGSKDNQQPVKLWDPKA-GQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAV 335 (877)
Q Consensus 257 l~sgs~dg~~~I~iwd~~~-~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i 335 (877)
|++++.|+. |++||+++ .+.+..+..|...|.+++|++++.+|++++.|+.|++||+++ ...+..+. +...+.++
T Consensus 190 l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~-~~~~~~~~ 265 (369)
T 3zwl_B 190 IIAGHKDGK--ISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST-LQVLKKYE-TDCPLNTA 265 (369)
T ss_dssp EEEEETTSE--EEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEEE-CSSCEEEE
T ss_pred EEEEcCCCE--EEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC-Cceeeeec-CCCCceeE
Confidence 999999998 99999998 788889999999999999999999999999999999999988 45555665 78899999
Q ss_pred EEcCCCCcEEEEEeCCC--------------cEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEe
Q psy13969 336 AWHPQHEGLFSSGGADG--------------SIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWT 401 (877)
Q Consensus 336 ~~~p~~~~~l~sgs~dg--------------~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd 401 (877)
+|++++. ++++++.++ .|++||+.+.+.+..+ ..|...|++++|++++++|++++.|+.|+||+
T Consensus 266 ~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~ 343 (369)
T 3zwl_B 266 VITPLKE-FIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRV-QGHFGPLNTVAISPQGTSYASGGEDGFIRLHH 343 (369)
T ss_dssp EECSSSS-EEEEEECCC-------------CEEEEEETTTCCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EecCCCc-eEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhe-ecccCcEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 9999998 667777777 8999999999988887 68999999999999999999999999999999
Q ss_pred CCC
Q psy13969 402 RNR 404 (877)
Q Consensus 402 ~~~ 404 (877)
++.
T Consensus 344 ~~~ 346 (369)
T 3zwl_B 344 FEK 346 (369)
T ss_dssp ECH
T ss_pred Ccc
Confidence 864
No 58
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-32 Score=310.11 Aligned_cols=298 Identities=14% Similarity=0.171 Sum_probs=235.2
Q ss_pred EccCCcee-----eccCCEEEEEEcC-CCCEEEEEeCCCeEEEEeCCC---cc---eEEEccCCCCeeEEEEcCCCCEEE
Q psy13969 149 WTPEGRRL-----AHDCAVRHMVWSH-NGLWMVTSDHQGYIKYWQSNM---NN---VKTFQGHKESIRGISFSPSDSKFA 216 (877)
Q Consensus 149 ~sp~g~~l-----~h~~~V~~l~~sp-d~~~l~sg~~dg~v~iwd~~~---~~---~~~~~~h~~~V~~i~~sp~~~~l~ 216 (877)
|.++++.+ .|...|++|+|++ ++++||+++.|++|+|||+.. .. ......|...|++|+|++++++|+
T Consensus 48 w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 127 (437)
T 3gre_A 48 GNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFA 127 (437)
T ss_dssp GGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEE
T ss_pred ccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEE
Confidence 66666554 4789999999999 999999999999999999654 21 122225999999999999999999
Q ss_pred EEECCCcEEEEecc---CCeeeEEec----------c--CCCCeEEEE--EcCCCCEEEEEecCCcccEEEEcCCCCcee
Q psy13969 217 TCSDDGTVRVWDFY---RCTEEKVLR----------G--HGADVKCVD--WHPYKSLIVSGSKDNQQPVKLWDPKAGQAL 279 (877)
Q Consensus 217 sgs~Dg~I~iwd~~---~~~~~~~l~----------~--h~~~v~~v~--~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~ 279 (877)
+++.|++|+|||+. +++.+..+. . +...+.++. +++++.+|++++.|+. |++||+++.+.+
T Consensus 128 s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~--i~iwd~~~~~~~ 205 (437)
T 3gre_A 128 VSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSR--VIIFDIRTLERL 205 (437)
T ss_dssp EEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSE--EEEEETTTCCEE
T ss_pred EEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCe--EEEEeCCCCeee
Confidence 99999999999995 443333322 1 455677777 5678999999999998 999999999999
Q ss_pred EEecc--CCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEe-cCCCCeEEEEEcCC---CCcEEEEEeCCCc
Q psy13969 280 ATLHA--HKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFR-GHKKEASAVAWHPQ---HEGLFSSGGADGS 353 (877)
Q Consensus 280 ~~~~~--h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~-~h~~~v~~i~~~p~---~~~~l~sgs~dg~ 353 (877)
..+.. |...|++++|++++++|++++.|++|+|||++. ...+..+. .|...|++++|+|. ...+|++++.|+.
T Consensus 206 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~ 284 (437)
T 3gre_A 206 QIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF-NVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTF 284 (437)
T ss_dssp EEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT-TEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEE
T ss_pred EEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC-ccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCc
Confidence 99988 899999999999999999999999999999998 56677765 78889999988764 2238999999999
Q ss_pred EEEEEcCCCceeEEecC-------------------------cCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCC
Q psy13969 354 IMFWHVGADKEVGCIPQ-------------------------AHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDP 408 (877)
Q Consensus 354 I~iwd~~~~~~~~~~~~-------------------------~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~ 408 (877)
|+|||+.+.+.+..+.. .|...|++++|+ ++.+|++++.|+.|++||+......
T Consensus 285 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 285 LTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSS 363 (437)
T ss_dssp EEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGC
T ss_pred EEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccc
Confidence 99999999887766531 166679999999 7789999999999999999764322
Q ss_pred ccccc------------------------------ccCCcceeeeeeeeeeccCC--CCeEEeccCCCCeeeecC
Q psy13969 409 MRDRY------------------------------NQKGLAHCITGVYNEEMELN--DSAVIPGMGLEDEDSVFP 451 (877)
Q Consensus 409 ~~~~~------------------------------~~~~~~~~~~~v~~~~~~~d--~~~l~~~~g~d~~~~~~~ 451 (877)
..... .......|...|.+++|..+ ...|+++ ..++.+++|.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~-~~dG~I~iw~ 437 (437)
T 3gre_A 364 KAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVAC-DNSGLIGIFQ 437 (437)
T ss_dssp EEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEE-ETTSCEEEEC
T ss_pred eEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEE-cCCceEEEeC
Confidence 11100 00111226677889999887 4455554 6889999984
No 59
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.1e-31 Score=286.21 Aligned_cols=254 Identities=21% Similarity=0.401 Sum_probs=212.5
Q ss_pred EEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccC--CeeeEEeccCCCCeEEEEEcCC--CCEEEEEecCCcccEE
Q psy13969 194 KTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYR--CTEEKVLRGHGADVKCVDWHPY--KSLIVSGSKDNQQPVK 269 (877)
Q Consensus 194 ~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~--~~~~~~l~~h~~~v~~v~~sp~--~~~l~sgs~dg~~~I~ 269 (877)
..+.+|...|++++|++++++||+++.|++|+|||+.. .+.+..+.+|...|++|+|+++ +++|++++.|++ |+
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~--v~ 80 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK--VM 80 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTE--EE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCE--EE
Confidence 45678999999999999999999999999999999974 3677889999999999999863 789999999999 99
Q ss_pred EEcCCCCc--eeEEeccCCCCeeEEEEccC--CCeEEEEeCCCeEEEEEcCCCCc-ceEEEecCCCCeEEEEEcCCC---
Q psy13969 270 LWDPKAGQ--ALATLHAHKSTVMDLAWNQN--GNWLVTASRDHLLKVFDIRNLSS-EVQTFRGHKKEASAVAWHPQH--- 341 (877)
Q Consensus 270 iwd~~~~~--~~~~~~~h~~~V~~l~~sp~--g~~l~s~s~Dg~I~iwd~~~~~~-~~~~~~~h~~~v~~i~~~p~~--- 341 (877)
|||+++++ .+..+..|...|.+++|+|+ +.+|++++.|++|+|||++.... ....+..|...|.+++|+|+.
T Consensus 81 iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp EEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---
T ss_pred EEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccc
Confidence 99998763 56778889999999999997 88999999999999999987422 256778899999999999973
Q ss_pred ---------CcEEEEEeCCCcEEEEEcCCCc----eeEEecCcCCCCEEEEEEcCCC---CEEEEEEcCCeEEEEeCCCC
Q psy13969 342 ---------EGLFSSGGADGSIMFWHVGADK----EVGCIPQAHDNIIWTMAWHPLG---HILATGSNDHASKFWTRNRL 405 (877)
Q Consensus 342 ---------~~~l~sgs~dg~I~iwd~~~~~----~~~~~~~~h~~~V~~v~~sp~g---~~l~sg~~dg~v~iwd~~~~ 405 (877)
..+|++++.|++|+|||+++.. .+..+ ..|...|++|+|+|++ .+|++++.|++|+|||++..
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l-~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL-EGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTEEEEEEEE-CCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEe-cCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 2489999999999999998765 34445 6899999999999984 89999999999999998763
Q ss_pred CCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCC
Q psy13969 406 GDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSS 453 (877)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~ 453 (877)
....... ......+...+++++|++++..|+++. .|+.+++|...
T Consensus 240 ~~~~~~~--~~~~~~~~~~v~~~~~s~~g~~las~~-~D~~v~lw~~~ 284 (297)
T 2pm7_B 240 QGPWKKT--LLKEEKFPDVLWRASWSLSGNVLALSG-GDNKVTLWKEN 284 (297)
T ss_dssp TSCCEEE--ESSSSCCSSCEEEEEECSSSCCEEEEE-TTSCEEEEEEC
T ss_pred CCcccee--eeecccCCCcEEEEEECCCCCEEEEEc-CCCcEEEEEEC
Confidence 2211111 111123456689999999999998874 68899999754
No 60
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.7e-31 Score=298.78 Aligned_cols=243 Identities=14% Similarity=0.268 Sum_probs=218.5
Q ss_pred eccCCEEEEEEcCC----C---CEEEEEeCCCeEEEEeCCCcc------eEEEccC-----CCCeeEEEEc----CCCCE
Q psy13969 157 AHDCAVRHMVWSHN----G---LWMVTSDHQGYIKYWQSNMNN------VKTFQGH-----KESIRGISFS----PSDSK 214 (877)
Q Consensus 157 ~h~~~V~~l~~spd----~---~~l~sg~~dg~v~iwd~~~~~------~~~~~~h-----~~~V~~i~~s----p~~~~ 214 (877)
.|...|++++|+++ + ++|++++.|+.|++|++.... +..+..| ...|++++|+ +++.+
T Consensus 60 ~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 139 (397)
T 1sq9_A 60 VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSH 139 (397)
T ss_dssp CCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CE
T ss_pred cCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCce
Confidence 58899999999999 9 999999999999999977655 7788888 5999999999 99999
Q ss_pred -EEEEECCCcEEEEeccC------CeeeE-----Ee-------ccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCC
Q psy13969 215 -FATCSDDGTVRVWDFYR------CTEEK-----VL-------RGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKA 275 (877)
Q Consensus 215 -l~sgs~Dg~I~iwd~~~------~~~~~-----~l-------~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~ 275 (877)
|++++.|+.|++||+.+ .+.+. .+ ..|...|.+++|++++ +|++++.|+. |++||+++
T Consensus 140 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~--i~i~d~~~ 216 (397)
T 1sq9_A 140 RLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGT--VQISELST 216 (397)
T ss_dssp EEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSE--EEEEETTT
T ss_pred EEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCc--EEEEECCC
Confidence 99999999999999988 66665 66 4488999999999999 9999999998 99999999
Q ss_pred CceeEEecc---C---CCCeeEEEEccCCCeEEEEeCC---CeEEEEEcCCCCcceEEEec-------------CCCCeE
Q psy13969 276 GQALATLHA---H---KSTVMDLAWNQNGNWLVTASRD---HLLKVFDIRNLSSEVQTFRG-------------HKKEAS 333 (877)
Q Consensus 276 ~~~~~~~~~---h---~~~V~~l~~sp~g~~l~s~s~D---g~I~iwd~~~~~~~~~~~~~-------------h~~~v~ 333 (877)
.+.+..+.. | ...|.+++|++++++|++++.| +.|+|||+++ ...+..+.. |...|+
T Consensus 217 ~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 295 (397)
T 1sq9_A 217 LRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF-GERIGSLSVPTHSSQASLGEFAHSSWVM 295 (397)
T ss_dssp TEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTT-CCEEEEECBC--------CCBSBSSCEE
T ss_pred CceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCC-CcccceeccCcccccccccccccCCcEE
Confidence 999999988 9 9999999999999999999999 9999999998 567788888 999999
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecC-----cC---------------CCCEEEEEEcCCC--------
Q psy13969 334 AVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ-----AH---------------DNIIWTMAWHPLG-------- 385 (877)
Q Consensus 334 ~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-----~h---------------~~~V~~v~~sp~g-------- 385 (877)
+++|+|++. +|++++.|+.|+|||+.+.+.+..+.. .| ...|++++|++++
T Consensus 296 ~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~ 374 (397)
T 1sq9_A 296 SLSFNDSGE-TLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGAD 374 (397)
T ss_dssp EEEECSSSS-EEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCT
T ss_pred EEEECCCCC-EEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccccc
Confidence 999999988 889999999999999999998888731 56 8999999999998
Q ss_pred --CEEEEEEcCCeEEEEeCCC
Q psy13969 386 --HILATGSNDHASKFWTRNR 404 (877)
Q Consensus 386 --~~l~sg~~dg~v~iwd~~~ 404 (877)
++|++++.|+.|+||++..
T Consensus 375 ~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 375 LNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp TSCEEEEEETTTEEEEEEEEC
T ss_pred ccceEEEecCCCcEEEEEcCC
Confidence 7999999999999999864
No 61
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.3e-31 Score=294.51 Aligned_cols=244 Identities=23% Similarity=0.356 Sum_probs=210.2
Q ss_pred eccCCEEEEEEcCC---CCEEEEEeCCCeEEEEeCCCc--ceEEEccCCCCeeEEEE------cCCCCEEEEEECCCcEE
Q psy13969 157 AHDCAVRHMVWSHN---GLWMVTSDHQGYIKYWQSNMN--NVKTFQGHKESIRGISF------SPSDSKFATCSDDGTVR 225 (877)
Q Consensus 157 ~h~~~V~~l~~spd---~~~l~sg~~dg~v~iwd~~~~--~~~~~~~h~~~V~~i~~------sp~~~~l~sgs~Dg~I~ 225 (877)
.|...|++++|+++ +.+|++++.|+.|++||+... .+..+..|...|++++| ++++++|++++.|++|+
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~ 142 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK 142 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEE
Confidence 48889999999998 699999999999999998764 57788999999999965 67899999999999999
Q ss_pred EEeccCCe-eeEEeccCCC----CeEEEE----EcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEcc
Q psy13969 226 VWDFYRCT-EEKVLRGHGA----DVKCVD----WHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQ 296 (877)
Q Consensus 226 iwd~~~~~-~~~~l~~h~~----~v~~v~----~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp 296 (877)
+||+.+.. .+..+..|.. .|.+++ |++++++|++++.|+. |++||+++.+.+.. ..|...|.+++|+|
T Consensus 143 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~--i~i~d~~~~~~~~~-~~~~~~v~~~~~~~ 219 (357)
T 3i2n_A 143 VWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGD--IKLFDLRNMALRWE-TNIKNGVCSLEFDR 219 (357)
T ss_dssp EECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSE--EEEEETTTTEEEEE-EECSSCEEEEEESC
T ss_pred EEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCe--EEEEECccCceeee-cCCCCceEEEEcCC
Confidence 99998876 6777765554 789998 7889999999999998 99999999886544 57889999999999
Q ss_pred ---CCCeEEEEeCCCeEEEEEcCCCCcceEEE-----ecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCc-----
Q psy13969 297 ---NGNWLVTASRDHLLKVFDIRNLSSEVQTF-----RGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADK----- 363 (877)
Q Consensus 297 ---~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~-----~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~----- 363 (877)
++.+|++++.|+.|++||++. ...+..+ ..|...|++++|+|++..+|++++.|+.|+|||++...
T Consensus 220 ~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 298 (357)
T 3i2n_A 220 KDISMNKLVATSLEGKFHVFDMRT-QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKK 298 (357)
T ss_dssp SSSSCCEEEEEESTTEEEEEEEEE-EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--C
T ss_pred CCCCCCEEEEECCCCeEEEEeCcC-CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccc
Confidence 999999999999999999987 3333333 48999999999999988789999999999999997542
Q ss_pred --------------eeEEecCcCCCCEEEEEEcCCCCEEE-EEEcCCeEEEEeCCCC
Q psy13969 364 --------------EVGCIPQAHDNIIWTMAWHPLGHILA-TGSNDHASKFWTRNRL 405 (877)
Q Consensus 364 --------------~~~~~~~~h~~~V~~v~~sp~g~~l~-sg~~dg~v~iwd~~~~ 405 (877)
.+..+ ..|...|++++|++++++|+ +++.|+.|+|||+.+.
T Consensus 299 ~~~g~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 299 DSEGIEMGVAGSVSLLQNV-TLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp CTTSCCCCCCCEEEEEEEE-ECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred cCCCCccccccccceeecc-ccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 34444 57899999999999999888 8999999999999753
No 62
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-31 Score=299.66 Aligned_cols=279 Identities=22% Similarity=0.429 Sum_probs=240.6
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceE-EEc-cCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEe
Q psy13969 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVK-TFQ-GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVL 238 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~-~~~-~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l 238 (877)
.+.++.|++ ..|++++.|+.|+||++.+.... .+. .|...|++++|++++++|++++.|+.|+|||+.+.+.+..+
T Consensus 95 ~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 172 (401)
T 4aez_A 95 YLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTM 172 (401)
T ss_dssp TCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred eEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEe
Confidence 456677775 45778889999999998776543 333 37899999999999999999999999999999999999999
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCC-CCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCC
Q psy13969 239 RGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPK-AGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRN 317 (877)
Q Consensus 239 ~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~-~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~ 317 (877)
..|...|.+++|+ +++|++++.|+. |++||++ ....+..+..|...|.+++|++++.+|++++.|+.|+|||+++
T Consensus 173 ~~~~~~v~~~~~~--~~~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 248 (401)
T 4aez_A 173 AGHQARVGCLSWN--RHVLSSGSRSGA--IHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARS 248 (401)
T ss_dssp CCCSSCEEEEEEE--TTEEEEEETTSE--EEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred cCCCCceEEEEEC--CCEEEEEcCCCC--EEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCC
Confidence 9999999999994 679999999998 9999999 5667888899999999999999999999999999999999998
Q ss_pred CCcceEEEecCCCCeEEEEEcCCCCcEEEEEe--CCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEE--c
Q psy13969 318 LSSEVQTFRGHKKEASAVAWHPQHEGLFSSGG--ADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGS--N 393 (877)
Q Consensus 318 ~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs--~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~--~ 393 (877)
...+..+..|...|.+++|+|++..++++++ .|+.|++||+.+.+.+..+ .+...|++++|++++.+|++++ .
T Consensus 249 -~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~g~~ 325 (401)
T 4aez_A 249 -SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTV--DAGSQVTSLIWSPHSKEIMSTHGFP 325 (401)
T ss_dssp -SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEE--ECSSCEEEEEECSSSSEEEEEECTT
T ss_pred -CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEE--eCCCcEEEEEECCCCCeEEEEeecC
Confidence 6777888899999999999999888999876 8999999999999988887 4677899999999999999965 8
Q ss_pred CCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCC
Q psy13969 394 DHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 394 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~ 454 (877)
|+.|+||++..... .....+..+...+..+.|++++.+++++. .|+.+++|+..+
T Consensus 326 dg~i~v~~~~~~~~-----~~~~~~~~h~~~v~~~~~s~dg~~l~s~~-~dg~i~iw~~~~ 380 (401)
T 4aez_A 326 DNNLSIWSYSSSGL-----TKQVDIPAHDTRVLYSALSPDGRILSTAA-SDENLKFWRVYD 380 (401)
T ss_dssp TCEEEEEEEETTEE-----EEEEEEECCSSCCCEEEECTTSSEEEEEC-TTSEEEEEECCC
T ss_pred CCcEEEEecCCccc-----eeEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEECCC
Confidence 99999999865211 11112345566789999999999998874 789999998764
No 63
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.8e-31 Score=295.94 Aligned_cols=238 Identities=19% Similarity=0.247 Sum_probs=203.7
Q ss_pred ccCCEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCcceEEEccCC---CCeeEEEEcCCCCEEEEEECCCcEEEEeccCCe
Q psy13969 158 HDCAVRHMVWSH-NGLWMVTSDHQGYIKYWQSNMNNVKTFQGHK---ESIRGISFSPSDSKFATCSDDGTVRVWDFYRCT 233 (877)
Q Consensus 158 h~~~V~~l~~sp-d~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~---~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~ 233 (877)
|...|++++|++ ++.+|++++.|+.|++||+....+..+..|. ..|++++|++++++|++++.|+.|++||+ +.+
T Consensus 117 h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~ 195 (383)
T 3ei3_B 117 PGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGH 195 (383)
T ss_dssp TTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSC
T ss_pred cCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCC
Confidence 889999999999 7799999999999999999887777776554 88999999999999999999999999999 577
Q ss_pred eeEEeccCCCCeEEEEEcCCCC-EEEEEecCCcccEEEEcCCC----CceeEEeccCCCCeeEEEEcc-CCCeEEEEeCC
Q psy13969 234 EEKVLRGHGADVKCVDWHPYKS-LIVSGSKDNQQPVKLWDPKA----GQALATLHAHKSTVMDLAWNQ-NGNWLVTASRD 307 (877)
Q Consensus 234 ~~~~l~~h~~~v~~v~~sp~~~-~l~sgs~dg~~~I~iwd~~~----~~~~~~~~~h~~~V~~l~~sp-~g~~l~s~s~D 307 (877)
.+..+..|...|.+++|++++. +|++++.|+. |++||+++ ...+..+ .|...|++++|++ ++.+|++++.|
T Consensus 196 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~--i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d 272 (383)
T 3ei3_B 196 EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDAT--VKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQR 272 (383)
T ss_dssp EEEEEECSSSCEEEEEECSSCTTEEEEEETTSE--EEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESS
T ss_pred EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCE--EEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCC
Confidence 8888999999999999999998 9999999998 99999997 5566666 7999999999999 99999999999
Q ss_pred CeEEEEEcCCCCcceEEEecCC-------C----------CeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecC
Q psy13969 308 HLLKVFDIRNLSSEVQTFRGHK-------K----------EASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ 370 (877)
Q Consensus 308 g~I~iwd~~~~~~~~~~~~~h~-------~----------~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 370 (877)
+.|+|||+++. ..+..+..|. . .+..++|++++.. +++.|+.|+|||+.+++.+..+..
T Consensus 273 ~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~---s~s~d~~i~iwd~~~~~~~~~l~~ 348 (383)
T 3ei3_B 273 NEIRVYSSYDW-SKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGLVHQLRD 348 (383)
T ss_dssp SEEEEEETTBT-TSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT---CTTCCCCEEEEETTTCCEEEEECB
T ss_pred CcEEEEECCCC-ccccccccccccccccccceEEeccCCCCceEEEecCCccc---ccCCCCeEEEEecCCCceeeeecC
Confidence 99999999874 4444444332 2 3334555555552 667899999999999999888842
Q ss_pred c-CCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 371 A-HDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 371 ~-h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
. |...+..++|++++++|++++ |+.|+|||++.
T Consensus 349 ~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 349 PNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 2 567788889999999999997 99999999864
No 64
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=5.3e-32 Score=299.91 Aligned_cols=237 Identities=13% Similarity=0.089 Sum_probs=194.2
Q ss_pred CEEEEEEcCCCCEEEEEe-----------CCCeEEEEeCCCcc--eEE--------EccCCCCeeEEEEcCCCCEEEEEE
Q psy13969 161 AVRHMVWSHNGLWMVTSD-----------HQGYIKYWQSNMNN--VKT--------FQGHKESIRGISFSPSDSKFATCS 219 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~-----------~dg~v~iwd~~~~~--~~~--------~~~h~~~V~~i~~sp~~~~l~sgs 219 (877)
.|+++++ +++.++++. .|..|++|+++... +.. ...+...|.+|+||||+++|++++
T Consensus 75 ~v~s~~~--~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as 152 (365)
T 4h5i_A 75 SPTAIDA--SKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIAS 152 (365)
T ss_dssp CCCEEEE--ETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEE
T ss_pred ceEEEEe--CCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEE
Confidence 4455544 455666653 46789999854421 111 123456789999999999987655
Q ss_pred --CCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEE--eccCCCCeeEEEEc
Q psy13969 220 --DDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALAT--LHAHKSTVMDLAWN 295 (877)
Q Consensus 220 --~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~--~~~h~~~V~~l~~s 295 (877)
.|++|+|||+.+.+.+..+. |...|.+|+|+|++++|++++.+. +++|+..+++.+.. ...|...|.+|+|+
T Consensus 153 ~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~v~fs 228 (365)
T 4h5i_A 153 SKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS---LEVISTVTGSCIARKTDFDKNWSLSKINFI 228 (365)
T ss_dssp SCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC---EEEEETTTCCEEEEECCCCTTEEEEEEEEE
T ss_pred CCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee---EEEEEeccCcceeeeecCCCCCCEEEEEEc
Confidence 68999999999999988886 778899999999999999998665 67777776665543 35688899999999
Q ss_pred cCCCeEEEEeCCC----eEEEEEcCCCCcc---eEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEe
Q psy13969 296 QNGNWLVTASRDH----LLKVFDIRNLSSE---VQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCI 368 (877)
Q Consensus 296 p~g~~l~s~s~Dg----~I~iwd~~~~~~~---~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~ 368 (877)
|++.+|++++.|+ .|++||+...... ...+..|...|++++|+|++. +||+++.|++|+|||+.+.+++..+
T Consensus 229 pdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~-~lasgs~D~~V~iwd~~~~~~~~~~ 307 (365)
T 4h5i_A 229 ADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGE-LAVLASNDNSIALVKLKDLSMSKIF 307 (365)
T ss_dssp ETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSC-EEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCC-ceEEEcCCCEEEEEECCCCcEEEEe
Confidence 9999999999887 6888998763322 345778999999999999998 8999999999999999999999887
Q ss_pred cCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 369 PQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 369 ~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
...|...|++|+||||+++|||++.|++|+||++..
T Consensus 308 ~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 308 KQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred cCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 789999999999999999999999999999999964
No 65
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-31 Score=299.43 Aligned_cols=283 Identities=14% Similarity=0.295 Sum_probs=242.7
Q ss_pred eccCCEEEEEEcCCCC-EEEEEeCCCeEEEEeC----CCcc-------eEEEcc----------CCCCeeEEEEcCCCCE
Q psy13969 157 AHDCAVRHMVWSHNGL-WMVTSDHQGYIKYWQS----NMNN-------VKTFQG----------HKESIRGISFSPSDSK 214 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~-~l~sg~~dg~v~iwd~----~~~~-------~~~~~~----------h~~~V~~i~~sp~~~~ 214 (877)
.|...|++++|+|+++ +||+++.|+.|+||++ .... ...+.. |...|++++|++++++
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 122 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNS 122 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSE
T ss_pred eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCE
Confidence 4678999999999999 9999999999999998 6554 333443 6789999999999999
Q ss_pred EEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCC------
Q psy13969 215 FATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKST------ 288 (877)
Q Consensus 215 l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~------ 288 (877)
|++++.|+.|+||| .+...+..+..|...|.+++|++++++|++++.|+. |++||+++++.+..+..+...
T Consensus 123 l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~ 199 (425)
T 1r5m_A 123 IVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENV--TILWNVISGTVMQHFELKETGGSSINA 199 (425)
T ss_dssp EEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCC--EEEEETTTTEEEEEECCC---------
T ss_pred EEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCe--EEEEECCCCcEEEEeeccccCccceee
Confidence 99999999999999 577888889999999999999999999999999999 999999999999998887776
Q ss_pred ---------eeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEc
Q psy13969 289 ---------VMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHV 359 (877)
Q Consensus 289 ---------V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~ 359 (877)
|.+++|+++ ..|++++.|+.|++||++. ...+..+..|...|++++|++++. +|++++.|+.|++||+
T Consensus 200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~i~~~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~ 276 (425)
T 1r5m_A 200 ENHSGDGSLGVDVEWVDD-DKFVIPGPKGAIFVYQITE-KTPTGKLIGHHGPISVLEFNDTNK-LLLSASDDGTLRIWHG 276 (425)
T ss_dssp ------CCCBSCCEEEET-TEEEEECGGGCEEEEETTC-SSCSEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEECS
T ss_pred ccccCCcceeeEEEEcCC-CEEEEEcCCCeEEEEEcCC-CceeeeeccCCCceEEEEECCCCC-EEEEEcCCCEEEEEEC
Confidence 999999987 4688999999999999998 577788889999999999999988 8899999999999999
Q ss_pred CCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEe
Q psy13969 360 GADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIP 439 (877)
Q Consensus 360 ~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~ 439 (877)
.+.+.+..+ ..|...|++++|++++ +|++++.|+.|++||+...... ..+..+...+..+.|++++..+++
T Consensus 277 ~~~~~~~~~-~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~-------~~~~~~~~~i~~~~~s~~~~~l~~ 347 (425)
T 1r5m_A 277 GNGNSQNCF-YGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLL-------ALSIVDGVPIFAGRISQDGQKYAV 347 (425)
T ss_dssp SSBSCSEEE-CCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEE-------EEEECTTCCEEEEEECTTSSEEEE
T ss_pred CCCccceEe-cCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEe-------EecccCCccEEEEEEcCCCCEEEE
Confidence 998888877 6799999999999999 9999999999999999753211 112234456889999999999988
Q ss_pred ccCCCCeeeecCCCCc
Q psy13969 440 GMGLEDEDSVFPSSEP 455 (877)
Q Consensus 440 ~~g~d~~~~~~~~~~~ 455 (877)
+. .++.+++|+....
T Consensus 348 ~~-~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 348 AF-MDGQVNVYDLKKL 362 (425)
T ss_dssp EE-TTSCEEEEECHHH
T ss_pred EE-CCCeEEEEECCCC
Confidence 75 6889999987643
No 66
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=6.3e-32 Score=307.04 Aligned_cols=285 Identities=19% Similarity=0.257 Sum_probs=223.7
Q ss_pred eccCCEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCcc---eEEEccCCCCeeEEEEcC-CCCEEEEEECCCcEEEEeccC
Q psy13969 157 AHDCAVRHMVWSH-NGLWMVTSDHQGYIKYWQSNMNN---VKTFQGHKESIRGISFSP-SDSKFATCSDDGTVRVWDFYR 231 (877)
Q Consensus 157 ~h~~~V~~l~~sp-d~~~l~sg~~dg~v~iwd~~~~~---~~~~~~h~~~V~~i~~sp-~~~~l~sgs~Dg~I~iwd~~~ 231 (877)
.|...|+||+|+| +.++||+|+.||.|+|||+.... +..+.+|...|++|+|+| ++++|+|++.|++|+|||+++
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~ 196 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG 196 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTS
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC
Confidence 5788999999999 66899999999999999986543 334568999999999998 688999999999999999977
Q ss_pred CeeeEEecc--CCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCC-eEEEEeCCC
Q psy13969 232 CTEEKVLRG--HGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGN-WLVTASRDH 308 (877)
Q Consensus 232 ~~~~~~l~~--h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~-~l~s~s~Dg 308 (877)
......... +...+.+++|++++++|++++.|+. |++||++. +.+..+..|...|++|+|+|++. +|++++.|+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~--i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~ 273 (435)
T 4e54_B 197 NILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGN--VILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQ 273 (435)
T ss_dssp CEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSB--EEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTS
T ss_pred CceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCc--EeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcc
Confidence 654444333 3445789999999999999999999 99999874 55678889999999999999875 788899999
Q ss_pred eEEEEEcCCCCc--ceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCC------CCEEEEE
Q psy13969 309 LLKVFDIRNLSS--EVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHD------NIIWTMA 380 (877)
Q Consensus 309 ~I~iwd~~~~~~--~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~------~~V~~v~ 380 (877)
+|+|||++.... .+.....|...|++|+|+|++. +|++++.|++|+|||+.+......+ ..|. ..+..+.
T Consensus 274 ~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~~~D~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 351 (435)
T 4e54_B 274 TVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA-RLLTTDQKSEIRVYSASQWDCPLGL-IPHPHRHFQHLTPIKAA 351 (435)
T ss_dssp BCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS-EEEEEESSSCEEEEESSSSSSEEEE-CCCCCCCCSSSCCCBCE
T ss_pred eeeEEecccccccceEEEeeeccccccceeECCCCC-eeEEEcCCCEEEEEECCCCccceEE-ecccccccccceeEEEE
Confidence 999999987432 2334467999999999999988 8899999999999999988777665 2332 1244567
Q ss_pred EcCCCCEEEEEE------------cCCeEEEEeCCCCCCCcccccccCCcceeeeeeeee-eccCCCCeEEeccCCCCee
Q psy13969 381 WHPLGHILATGS------------NDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNE-EMELNDSAVIPGMGLEDED 447 (877)
Q Consensus 381 ~sp~g~~l~sg~------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~d~~~l~~~~g~d~~~ 447 (877)
|++++.+++++. .++.|+|||+.+.. .+... ...+...|.++ +|++++.+|++++ ++.+
T Consensus 352 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~-~~~~l-----~~~~~~~v~s~~~fspdg~~lasg~--d~~i 423 (435)
T 4e54_B 352 WHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGK-MMCQL-----YDPESSGISSLNEFNPMGDTLASAM--GYHI 423 (435)
T ss_dssp ECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCC-EEEEE-----CCSSCCCCCCEEEECTTSSCEEEEC--SSEE
T ss_pred EcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCc-EEEEE-----eCCCCCcEEEEEEECCCCCEEEEEc--CCcE
Confidence 777777766664 34579999987532 21111 12334456665 5899999988764 7799
Q ss_pred eecCCCC
Q psy13969 448 SVFPSSE 454 (877)
Q Consensus 448 ~~~~~~~ 454 (877)
++|...+
T Consensus 424 ~iW~~~~ 430 (435)
T 4e54_B 424 LIWSQQE 430 (435)
T ss_dssp EECCCC-
T ss_pred EEEECCc
Confidence 9998764
No 67
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.1e-31 Score=315.85 Aligned_cols=242 Identities=21% Similarity=0.428 Sum_probs=207.8
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeee
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEE 235 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~ 235 (877)
.|...|++++|++++++|++++.|++|+|||+... .+..+..|...|++|+|++++++|++++.|++|+|||+......
T Consensus 428 ~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~ 507 (694)
T 3dm0_A 428 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKY 507 (694)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcce
Confidence 38889999999999999999999999999998764 56788899999999999999999999999999999998654333
Q ss_pred EEe---ccCCCCeEEEEEcCCC--CEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeE
Q psy13969 236 KVL---RGHGADVKCVDWHPYK--SLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLL 310 (877)
Q Consensus 236 ~~l---~~h~~~v~~v~~sp~~--~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I 310 (877)
... ..|...|.|++|++++ .+|++++.|+. |++||+++.+.+..+..|...|++|+|++++++|++++.|++|
T Consensus 508 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~--v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i 585 (694)
T 3dm0_A 508 TISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKT--VKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVV 585 (694)
T ss_dssp EECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSC--EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBC
T ss_pred eeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCe--EEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeE
Confidence 332 4688899999999986 58999999999 9999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCc------------------C
Q psy13969 311 KVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQA------------------H 372 (877)
Q Consensus 311 ~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~------------------h 372 (877)
+|||+++ ...+..+. +...|.+++|+|++. +|+++ .|+.|+|||+.+...+..+... +
T Consensus 586 ~iwd~~~-~~~~~~~~-~~~~v~~~~~sp~~~-~l~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (694)
T 3dm0_A 586 LLWDLAE-GKKLYSLE-ANSVIHALCFSPNRY-WLCAA-TEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRK 661 (694)
T ss_dssp EEEETTT-TEEEECCB-CSSCEEEEEECSSSS-EEEEE-ETTEEEEEETTTTEEEEEECCCCC----------------C
T ss_pred EEEECCC-CceEEEec-CCCcEEEEEEcCCCc-EEEEE-cCCCEEEEECCCCCChhhhccccccccccccccccccCCce
Confidence 9999988 45555554 456899999999976 55554 5677999999998877665211 1
Q ss_pred CCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 373 DNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 373 ~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
...|++++|+|++++|++++.|++|+||++.+
T Consensus 662 ~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 662 VIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp CCCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred eEEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 12478999999999999999999999999853
No 68
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-30 Score=281.03 Aligned_cols=277 Identities=17% Similarity=0.297 Sum_probs=238.7
Q ss_pred eeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCC--
Q psy13969 156 LAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRC-- 232 (877)
Q Consensus 156 l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~-- 232 (877)
.+|...|++++| +++.+|++++.|+.|++||+... ....+..|...|++++|++++++|++++.|+.|++|++...
T Consensus 15 ~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 93 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSG 93 (313)
T ss_dssp CCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTT
T ss_pred hCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCC
Confidence 368999999999 99999999999999999997665 45677889999999999999999999999999999998654
Q ss_pred -eeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEcc-CCCeEEEEeCCCeE
Q psy13969 233 -TEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQ-NGNWLVTASRDHLL 310 (877)
Q Consensus 233 -~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp-~g~~l~s~s~Dg~I 310 (877)
+.+..+..|...|.+++| ++++|++++.|+. |++|| ..+.+..+..|...|.+++|++ ++++|++++.|+.|
T Consensus 94 ~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~--i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i 167 (313)
T 3odt_A 94 EDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKT--AKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTI 167 (313)
T ss_dssp SCC-CEECCCSSCEEEEEE--ETTEEEEEETTSE--EEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCE
T ss_pred CCcccchhhcccCEEEEEe--cCCEEEEEeCCCC--EEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCE
Confidence 556778889999999999 5789999999998 99999 6777888889999999999998 89999999999999
Q ss_pred EEEEcCCCCcceEEEec-CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEE
Q psy13969 311 KVFDIRNLSSEVQTFRG-HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILA 389 (877)
Q Consensus 311 ~iwd~~~~~~~~~~~~~-h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~ 389 (877)
++||.. ..+..+.. |...|.+++|++++. |++++.|+.|++||+++.+.+..+ ..|...|++++|++++ .|+
T Consensus 168 ~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~~~-~l~ 240 (313)
T 3odt_A 168 KLWQND---KVIKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHTGDVLRTY-EGHESFVYCIKLLPNG-DIV 240 (313)
T ss_dssp EEEETT---EEEEEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECTTS-CEE
T ss_pred EEEecC---ceEEEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCchhhhhhh-hcCCceEEEEEEecCC-CEE
Confidence 999943 45666666 999999999999986 788999999999999999988887 6899999999999999 588
Q ss_pred EEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCCc
Q psy13969 390 TGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSEP 455 (877)
Q Consensus 390 sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~~ 455 (877)
+++.|+.|++||+...... ..+..+...+..+.|++++..+ + .+.++.+++|+..+.
T Consensus 241 ~~~~dg~v~iwd~~~~~~~-------~~~~~~~~~i~~~~~~~~~~~~-~-~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 241 SCGEDRTVRIWSKENGSLK-------QVITLPAISIWSVDCMSNGDII-V-GSSDNLVRIFSQEKS 297 (313)
T ss_dssp EEETTSEEEEECTTTCCEE-------EEEECSSSCEEEEEECTTSCEE-E-EETTSCEEEEESCGG
T ss_pred EEecCCEEEEEECCCCcee-------EEEeccCceEEEEEEccCCCEE-E-EeCCCcEEEEeCCCC
Confidence 9999999999999764211 1123344568899999998844 4 357899999987653
No 69
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.1e-30 Score=292.66 Aligned_cols=282 Identities=18% Similarity=0.320 Sum_probs=213.4
Q ss_pred eccCCEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCcceE-EE-------------ccCCCCeeEEEEcC-CCCEEEEEEC
Q psy13969 157 AHDCAVRHMVWSH-NGLWMVTSDHQGYIKYWQSNMNNVK-TF-------------QGHKESIRGISFSP-SDSKFATCSD 220 (877)
Q Consensus 157 ~h~~~V~~l~~sp-d~~~l~sg~~dg~v~iwd~~~~~~~-~~-------------~~h~~~V~~i~~sp-~~~~l~sgs~ 220 (877)
.|...|++|+|+| ++++|++++.|+.|+||++...... .+ ..|...|++++|++ ++.+|++++.
T Consensus 41 ~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 120 (408)
T 4a11_B 41 IHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF 120 (408)
T ss_dssp CCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEET
T ss_pred ccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeC
Confidence 4899999999999 9999999999999999997764322 11 25999999999999 7789999999
Q ss_pred CCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCC---CEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccC
Q psy13969 221 DGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYK---SLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQN 297 (877)
Q Consensus 221 Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~---~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~ 297 (877)
|+.|++||+.+.+.+..+. +...+.+++|++.. .+|++++.|+. |++||+++.+.+..+..|...|++++|+|+
T Consensus 121 d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPK--VQLCDLKSGSCSHILQGHRQEILAVSWSPR 197 (408)
T ss_dssp TSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSS--EEEEESSSSCCCEEECCCCSCEEEEEECSS
T ss_pred CCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCe--EEEEeCCCcceeeeecCCCCcEEEEEECCC
Confidence 9999999999988888777 78889999999854 49999999998 999999999999999999999999999999
Q ss_pred CC-eEEEEeCCCeEEEEEcCCCCcceEEE---------------ecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCC
Q psy13969 298 GN-WLVTASRDHLLKVFDIRNLSSEVQTF---------------RGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGA 361 (877)
Q Consensus 298 g~-~l~s~s~Dg~I~iwd~~~~~~~~~~~---------------~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~ 361 (877)
+. +|++++.|+.|++||++.....+..+ ..|...|++++|+|++. +|++++.|+.|++||+.+
T Consensus 198 ~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~ 276 (408)
T 4a11_B 198 YDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL-HLLTVGTDNRMRLWNSSN 276 (408)
T ss_dssp CTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT
T ss_pred CCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC-EEEEecCCCeEEEEECCC
Confidence 88 48899999999999998865555555 57889999999999987 888999999999999876
Q ss_pred Cce-----------------------------------------------eEEecCcCCCCEEEEEEcCCCCEEEEEEcC
Q psy13969 362 DKE-----------------------------------------------VGCIPQAHDNIIWTMAWHPLGHILATGSND 394 (877)
Q Consensus 362 ~~~-----------------------------------------------~~~~~~~h~~~V~~v~~sp~g~~l~sg~~d 394 (877)
.+. +..+ ..|...|++++|++++.+|++++.|
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~d 355 (408)
T 4a11_B 277 GENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML-KGHYKTVDCCVFQSNFQELYSGSRD 355 (408)
T ss_dssp CCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE-CCCSSCEEEEEEETTTTEEEEEETT
T ss_pred CccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee-ccCCCeEEEEEEcCCCCEEEEECCC
Confidence 432 2223 5688999999999999999999999
Q ss_pred CeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCC
Q psy13969 395 HASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSS 453 (877)
Q Consensus 395 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~ 453 (877)
+.|++|+++.......... ......+.+...........+..+++|...
T Consensus 356 g~i~iw~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 356 CNILAWVPSLYEPVPDDDE----------TTTKSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp SCEEEEEECC-------------------------------------------------
T ss_pred CeEEEEeCCCCCccCCCCc----------eEeccccccccceeecccCccCceeecCCc
Confidence 9999999986432211100 011112222233344445567788888654
No 70
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.7e-30 Score=279.03 Aligned_cols=260 Identities=19% Similarity=0.365 Sum_probs=223.0
Q ss_pred CccCCeEEEEEccC-Ccee-----------------------------eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy13969 139 KMRCPIFSMTWTPE-GRRL-----------------------------AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQS 188 (877)
Q Consensus 139 ~~~~~i~~~~~sp~-g~~l-----------------------------~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~ 188 (877)
.+...|++++|+|+ +++| +|...|++++|++++++|++++.|+.|++|+.
T Consensus 36 GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~ 115 (340)
T 4aow_A 36 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDL 115 (340)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEee
Confidence 45667777777776 3455 37889999999999999999999999999997
Q ss_pred CCcc-eEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeee-EEeccCCCCeEEEEEcCCC--CEEEEEecCC
Q psy13969 189 NMNN-VKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEE-KVLRGHGADVKCVDWHPYK--SLIVSGSKDN 264 (877)
Q Consensus 189 ~~~~-~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~-~~l~~h~~~v~~v~~sp~~--~~l~sgs~dg 264 (877)
.... ......+...+..+.+++++.+|++++.|+.+++||+...... ..+..|...|.+++|+++. .++++++.|+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~ 195 (340)
T 4aow_A 116 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK 195 (340)
T ss_dssp TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTS
T ss_pred cccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCC
Confidence 6654 4566678889999999999999999999999999998765443 3456789999999999865 5788999999
Q ss_pred cccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcE
Q psy13969 265 QQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGL 344 (877)
Q Consensus 265 ~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~ 344 (877)
. |++||+++.+.+..+..|...|++|+|+|++++|++++.|++|+|||+++ ...+..+. +...|.+++|++++.
T Consensus 196 ~--i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~-~~~~~~~~-~~~~v~~~~~~~~~~-- 269 (340)
T 4aow_A 196 L--VKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE-GKHLYTLD-GGDIINALCFSPNRY-- 269 (340)
T ss_dssp C--EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTT-TEEEEEEE-CSSCEEEEEECSSSS--
T ss_pred E--EEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEecc-Cceeeeec-CCceEEeeecCCCCc--
Confidence 8 99999999999999999999999999999999999999999999999998 45666666 456899999999875
Q ss_pred EEEEeCCCcEEEEEcCCCceeEEec--------CcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 345 FSSGGADGSIMFWHVGADKEVGCIP--------QAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 345 l~sgs~dg~I~iwd~~~~~~~~~~~--------~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
+++++.|+.|+|||++....+..+. ..|...|++++|+|++++|++++.|+.|+|||+++
T Consensus 270 ~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 270 WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 5566789999999999877665542 36888999999999999999999999999999875
No 71
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=5.8e-31 Score=298.55 Aligned_cols=246 Identities=25% Similarity=0.462 Sum_probs=219.3
Q ss_pred eeccCCEEEEEEcCC-CCEEEEEeCCCeEEEEeCCC-----------cceEEEccCCCCeeEEEEcCCCC-EEEEEECCC
Q psy13969 156 LAHDCAVRHMVWSHN-GLWMVTSDHQGYIKYWQSNM-----------NNVKTFQGHKESIRGISFSPSDS-KFATCSDDG 222 (877)
Q Consensus 156 l~h~~~V~~l~~spd-~~~l~sg~~dg~v~iwd~~~-----------~~~~~~~~h~~~V~~i~~sp~~~-~l~sgs~Dg 222 (877)
+.|...|++|+|+++ +.+|++++.++.|+||++.. ..+..+..|...|++|+|++++. +|++++.|+
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 479999999999997 68999999999999999763 45678889999999999999988 999999999
Q ss_pred cEEEEeccCCee-------eEEeccCCCCeEEEEEcC-CCCEEEEEecCCcccEEEEcCCCC---ceeEEeccCCCCeeE
Q psy13969 223 TVRVWDFYRCTE-------EKVLRGHGADVKCVDWHP-YKSLIVSGSKDNQQPVKLWDPKAG---QALATLHAHKSTVMD 291 (877)
Q Consensus 223 ~I~iwd~~~~~~-------~~~l~~h~~~v~~v~~sp-~~~~l~sgs~dg~~~I~iwd~~~~---~~~~~~~~h~~~V~~ 291 (877)
+|+|||+.+... ...+..|...|.+++|+| +..+|++++.|+. |++||+++. +.+..+..|...|++
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~v~~ 282 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQK--LMIWDTRNNNTSKPSHTVDAHTAEVNC 282 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSE--EEEEETTCSCSSSCSEEEECCSSCEEE
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCe--EEEEECCCCCCCcceeEeecCCCCeEE
Confidence 999999987322 456778999999999999 6789999999998 999999987 577788899999999
Q ss_pred EEEccCCC-eEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCC--------
Q psy13969 292 LAWNQNGN-WLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGAD-------- 362 (877)
Q Consensus 292 l~~sp~g~-~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~-------- 362 (877)
|+|++++. +|++++.|++|+|||++.....+..+..|...|++|+|+|++..+|++++.|+.|+|||+...
T Consensus 283 i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 362 (430)
T 2xyi_A 283 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 362 (430)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHH
T ss_pred EEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccc
Confidence 99999887 688999999999999998677889999999999999999999889999999999999999772
Q ss_pred ------ceeEEecCcCCCCEEEEEEcCCCC-EEEEEEcCCeEEEEeCCC
Q psy13969 363 ------KEVGCIPQAHDNIIWTMAWHPLGH-ILATGSNDHASKFWTRNR 404 (877)
Q Consensus 363 ------~~~~~~~~~h~~~V~~v~~sp~g~-~l~sg~~dg~v~iwd~~~ 404 (877)
..+..+ ..|...|++++|++++. +|++++.|+.|+||++..
T Consensus 363 ~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 363 AEDGPPELLFIH-GGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp HHHCCTTEEEEC-CCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred cccCCcceEEEc-CCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 333333 68899999999999998 999999999999999863
No 72
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.9e-31 Score=289.28 Aligned_cols=271 Identities=13% Similarity=0.147 Sum_probs=230.4
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcc----eEEEccCCCCeeEEEEcCCCC-EEEEEECCCcEEEEec-c
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNN----VKTFQGHKESIRGISFSPSDS-KFATCSDDGTVRVWDF-Y 230 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~----~~~~~~h~~~V~~i~~sp~~~-~l~sgs~Dg~I~iwd~-~ 230 (877)
+|...|++++|++++++|++++.|+.|+||++.... +..+..|...|++++|+++++ +|++++.|+.|++||+ .
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence 688999999999999999999999999999987766 677789999999999999999 9999999999999999 7
Q ss_pred CCeeeEEecc--CCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCC---------CceeEEeccCCCCeeEEEEccCCC
Q psy13969 231 RCTEEKVLRG--HGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKA---------GQALATLHAHKSTVMDLAWNQNGN 299 (877)
Q Consensus 231 ~~~~~~~l~~--h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~---------~~~~~~~~~h~~~V~~l~~sp~g~ 299 (877)
+.+ ...+.. |...|.+++|++ +++|++++.|+. |++||+++ .+.+..+. |...|.+++|+++.
T Consensus 89 ~~~-~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~--i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~- 162 (342)
T 1yfq_A 89 SPS-FQALTNNEANLGICRICKYG-DDKLIAASWDGL--IEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR- 162 (342)
T ss_dssp SSS-EEECBSCCCCSCEEEEEEET-TTEEEEEETTSE--EEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE-
T ss_pred CCc-eEeccccCCCCceEEEEeCC-CCEEEEEcCCCe--EEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc-
Confidence 664 477788 999999999999 999999999998 99999987 76666666 88999999999886
Q ss_pred eEEEEeCCCeEEEEEcCC-CCc-ceEEEecCCCCeEEEEEcC-CCCcEEEEEeCCCcEEEEEcCCC------ceeEEecC
Q psy13969 300 WLVTASRDHLLKVFDIRN-LSS-EVQTFRGHKKEASAVAWHP-QHEGLFSSGGADGSIMFWHVGAD------KEVGCIPQ 370 (877)
Q Consensus 300 ~l~s~s~Dg~I~iwd~~~-~~~-~~~~~~~h~~~v~~i~~~p-~~~~~l~sgs~dg~I~iwd~~~~------~~~~~~~~ 370 (877)
|++++.|+.|++||++. ... .......|...|.+++|+| ++. +|++++.|+.|+||+++.. +.+..+ .
T Consensus 163 -l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~-~ 239 (342)
T 1yfq_A 163 -LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE-GYACSSIDGRVAVEFFDDQGDDYNSSKRFAF-R 239 (342)
T ss_dssp -EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC-EEEEEETTSEEEEEECCTTCCSTTCTTCEEE-E
T ss_pred -EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCC-EEEEEecCCcEEEEEEcCCCcccccccceee-e
Confidence 99999999999999987 443 3345556888999999999 877 8899999999999999876 555555 4
Q ss_pred cCCC---------CEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCccee-eeeeeeeeccCCCCeEEec
Q psy13969 371 AHDN---------IIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHC-ITGVYNEEMELNDSAVIPG 440 (877)
Q Consensus 371 ~h~~---------~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~d~~~l~~~ 440 (877)
.|.. .|++++|++++++|++++.|+.|++||+..... ...+..+ ...|.++. +++.+++++
T Consensus 240 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~-------~~~~~~~h~~~v~~~~--~~~~~l~s~ 310 (342)
T 1yfq_A 240 CHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK-------IKNFAKFNEDSVVKIA--CSDNILCLA 310 (342)
T ss_dssp CCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE-------EEECCCCSSSEEEEEE--ECSSEEEEE
T ss_pred cccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhH-------hhhhhcccCCCceEec--CCCCeEEEE
Confidence 5544 999999999999999999999999999975321 1123334 56677777 788888887
Q ss_pred cCCCCe
Q psy13969 441 MGLEDE 446 (877)
Q Consensus 441 ~g~d~~ 446 (877)
+ .|+.
T Consensus 311 s-~Dg~ 315 (342)
T 1yfq_A 311 T-SDDT 315 (342)
T ss_dssp E-ECTH
T ss_pred e-cCCc
Confidence 5 4554
No 73
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.4e-30 Score=289.67 Aligned_cols=280 Identities=19% Similarity=0.395 Sum_probs=239.1
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceE---EEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeee
Q psy13969 159 DCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVK---TFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEE 235 (877)
Q Consensus 159 ~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~---~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~ 235 (877)
+..++.|+||++ ++|++|. |++|+|||..+..+. .+..|...|++|+|++++++||+|+.|++|+|||+.+++.+
T Consensus 105 d~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 105 DYYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 182 (420)
T ss_dssp CTTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred cccceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE
Confidence 345678899975 4676665 999999998876543 33468889999999999999999999999999999999999
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCC-ceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEE
Q psy13969 236 KVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG-QALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD 314 (877)
Q Consensus 236 ~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~-~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd 314 (877)
..+..|...|.+++|+ +.+|++++.|+. +++||.+.. ..+..+..|...+..+.|++++.+|++++.|+.|+|||
T Consensus 183 ~~~~~h~~~v~~~s~~--~~~l~sgs~d~~--i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~ 258 (420)
T 4gga_A 183 RNMTSHSARVGSLSWN--SYILSSGSRSGH--IHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP 258 (420)
T ss_dssp EEECCCSSCEEEEEEE--TTEEEEEETTSE--EEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEeCCCCceEEEeeC--CCEEEEEeCCCc--eeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEe
Confidence 9999999999999886 679999999998 999998864 45678889999999999999999999999999999999
Q ss_pred cCCCC---cceEEEecCCCCeEEEEEcCCCCcEEEEE--eCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEE
Q psy13969 315 IRNLS---SEVQTFRGHKKEASAVAWHPQHEGLFSSG--GADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILA 389 (877)
Q Consensus 315 ~~~~~---~~~~~~~~h~~~v~~i~~~p~~~~~l~sg--s~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~ 389 (877)
+.... ..+.....|...|.+++|+|.+..+++++ +.|++|+|||+.++.++..+ .+...|.++.|++++..|+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~--~~~~~v~~~~~~~~~~~lv 336 (420)
T 4gga_A 259 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV--DAHSQVCSILWSPHYKELI 336 (420)
T ss_dssp SSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEE--ECSSCEEEEEEETTTTEEE
T ss_pred eccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceee--ccccceeeeeecCCCCeEE
Confidence 97633 24567788999999999999988888765 57999999999999988887 3456799999999999888
Q ss_pred EEE--cCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCC
Q psy13969 390 TGS--NDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 390 sg~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~ 454 (877)
+++ .|+.|+|||+.+... ...+..|...|.+++|++|+.+|++++ .|+.+++|+..+
T Consensus 337 ~~sg~~d~~I~iwd~~~~~~-------v~~l~gH~~~V~~l~~spdg~~l~S~s-~D~tvriWdv~~ 395 (420)
T 4gga_A 337 SGHGFAQNQLVIWKYPTMAK-------VAELKGHTSRVLSLTMSPDGATVASAA-ADETLRLWRCFE 395 (420)
T ss_dssp EEECTTTCCEEEEETTTCCE-------EEEECCCSSCEEEEEECTTSSCEEEEE-TTTEEEEECCSC
T ss_pred EEEecCCCEEEEEECCCCcE-------EEEEcCCCCCEEEEEEcCCCCEEEEEe-cCCeEEEEECCC
Confidence 876 799999999976322 223456777899999999999999875 799999998764
No 74
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.1e-32 Score=299.92 Aligned_cols=242 Identities=17% Similarity=0.254 Sum_probs=196.6
Q ss_pred eeeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcc----eEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEecc
Q psy13969 155 RLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNN----VKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFY 230 (877)
Q Consensus 155 ~l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~----~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~ 230 (877)
+..|...|++++|++++++|++++.|++|+|||+.... ...+..|...|++++|++++++|++++.|++|++||+.
T Consensus 51 ~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 130 (377)
T 3dwl_C 51 FSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFE 130 (377)
T ss_dssp BCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-
T ss_pred EecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEEC
Confidence 33699999999999999999999999999999987654 66788999999999999999999999999999999998
Q ss_pred CCe---eeEEecc-CCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCC------------------CCceeEEeccCCCC
Q psy13969 231 RCT---EEKVLRG-HGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPK------------------AGQALATLHAHKST 288 (877)
Q Consensus 231 ~~~---~~~~l~~-h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~------------------~~~~~~~~~~h~~~ 288 (877)
+.+ ....+.. |...|++++|+|++++|++++.|+. |++||++ .++.+..+ .|...
T Consensus 131 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 207 (377)
T 3dwl_C 131 QENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRK--AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGW 207 (377)
T ss_dssp ----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSC--EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSS
T ss_pred CcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCE--EEEEEEEecccCCCccccccccccchhhhhhcc-cCCce
Confidence 876 4677777 9999999999999999999999998 9999985 34456666 89999
Q ss_pred eeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcc----eEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCc-
Q psy13969 289 VMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSE----VQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADK- 363 (877)
Q Consensus 289 V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~----~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~- 363 (877)
|++++|+|++++|++++.|++|+|||+++. .. +..+..|...|++++|++++. +|++++.++.+ +|+.....
T Consensus 208 v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~~-~~~~~~~~~ 284 (377)
T 3dwl_C 208 VHAVGFSPSGNALAYAGHDSSVTIAYPSAP-EQPPRALITVKLSQLPLRSLLWANESA-IVAAGYNYSPI-LLQGNESGW 284 (377)
T ss_dssp EEEEEECTTSSCEEEEETTTEEC-CEECST-TSCEEECCCEECSSSCEEEEEEEETTE-EEEEESSSSEE-EECCCC---
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCC-CCcceeeEeecCCCCceEEEEEcCCCC-EEEEEcCCcEE-EEEeCCCce
Confidence 999999999999999999999999999984 44 677889999999999999987 77887766555 67664211
Q ss_pred e--------------------------------------e------------EEecCcCCCCEEEEEEcCCC-C---EEE
Q psy13969 364 E--------------------------------------V------------GCIPQAHDNIIWTMAWHPLG-H---ILA 389 (877)
Q Consensus 364 ~--------------------------------------~------------~~~~~~h~~~V~~v~~sp~g-~---~l~ 389 (877)
. . ..+...|...|+++++.+.. . .|+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~ 364 (377)
T 3dwl_C 285 AHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFT 364 (377)
T ss_dssp CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEE
T ss_pred EEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEE
Confidence 0 0 00112389999999976543 3 699
Q ss_pred EEEcCCeEEEEeC
Q psy13969 390 TGSNDHASKFWTR 402 (877)
Q Consensus 390 sg~~dg~v~iwd~ 402 (877)
|++.|+.|+|||+
T Consensus 365 s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 365 SSGTDGRVVLWTL 377 (377)
T ss_dssp EEETTSEEEEECC
T ss_pred eecCCCcEEEecC
Confidence 9999999999985
No 75
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=5.8e-31 Score=323.51 Aligned_cols=288 Identities=19% Similarity=0.310 Sum_probs=248.5
Q ss_pred eeeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCe
Q psy13969 155 RLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCT 233 (877)
Q Consensus 155 ~l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~ 233 (877)
+..|...|++++|+|++.+|++++.++.|+|||+.+. .+..+..|...|++++|++++++|++++.|+.|+|||+.+++
T Consensus 9 ~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~ 88 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE 88 (814)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC
T ss_pred eecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 3479999999999999999999999999999997654 567888999999999999999999999999999999999999
Q ss_pred eeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCC-ceeEEeccCCCCeeEEEEcc-CCCeEEEEeCCCeEE
Q psy13969 234 EEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG-QALATLHAHKSTVMDLAWNQ-NGNWLVTASRDHLLK 311 (877)
Q Consensus 234 ~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~-~~~~~~~~h~~~V~~l~~sp-~g~~l~s~s~Dg~I~ 311 (877)
.+..+..|...|++++|+|++.+|++++.|+. |++||+.+. .....+..|...|.+++|+| ++.+|++++.|++|+
T Consensus 89 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~--i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~ 166 (814)
T 3mkq_A 89 KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT--VKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVK 166 (814)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSE--EEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCE--EEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEE
Confidence 99999999999999999999999999999998 999999986 67778889999999999999 889999999999999
Q ss_pred EEEcCCCCcceEEEec-CCCCeEEEEEcC--CCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEE
Q psy13969 312 VFDIRNLSSEVQTFRG-HKKEASAVAWHP--QHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHIL 388 (877)
Q Consensus 312 iwd~~~~~~~~~~~~~-h~~~v~~i~~~p--~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l 388 (877)
+||++.. .....+.. |...|.+++|+| ++. +|++++.|+.|++||+.+.+.+..+ ..|...|++++|+|++.+|
T Consensus 167 vwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l 243 (814)
T 3mkq_A 167 VWSLGQS-TPNFTLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQTKSCVATL-EGHMSNVSFAVFHPTLPII 243 (814)
T ss_dssp EEETTCS-SCSEEEECCCTTCCCEEEECCSTTCC-EEEEECTTSEEEEEETTTTEEEEEE-ECCSSCEEEEEECSSSSEE
T ss_pred EEECCCC-cceeEEecCCCCCEEEEEEEECCCCC-EEEEEeCCCEEEEEECCCCcEEEEE-cCCCCCEEEEEEcCCCCEE
Confidence 9999874 44444444 458999999999 766 8899999999999999999888877 6789999999999999999
Q ss_pred EEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCC
Q psy13969 389 ATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 389 ~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~ 454 (877)
++++.|+.|++||+...... ..+..+...+..++|++++..++...+.+..+.+|....
T Consensus 244 ~~~~~dg~v~vwd~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 244 ISGSEDGTLKIWNSSTYKVE-------KTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp EEEETTSCEEEEETTTCSEE-------EEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred EEEeCCCeEEEEECCCCcEE-------EEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 99999999999998753211 112233456888999998875433334567777776543
No 76
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=1.2e-29 Score=284.81 Aligned_cols=241 Identities=22% Similarity=0.429 Sum_probs=211.6
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-cceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEecc-CCeee
Q psy13969 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFY-RCTEE 235 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~-~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~-~~~~~ 235 (877)
|...|++++|++++++|++++.|+.|+|||+.. ..+..+..|...|.+++|+ +++|++++.|+.|++||+. ....+
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~ 210 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQI 210 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEE
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCccee
Confidence 788999999999999999999999999999765 4567888999999999994 6799999999999999998 46677
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCC-eEEEEe--CCCeEEE
Q psy13969 236 KVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGN-WLVTAS--RDHLLKV 312 (877)
Q Consensus 236 ~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~-~l~s~s--~Dg~I~i 312 (877)
..+..|...|.+++|++++++|++++.|+. |++||+++.+.+..+..|...|.+++|+|++. +|++++ .|+.|++
T Consensus 211 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~--v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i 288 (401)
T 4aez_A 211 GTLQGHSSEVCGLAWRSDGLQLASGGNDNV--VQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHF 288 (401)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSC--EEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEE
T ss_pred eEEcCCCCCeeEEEEcCCCCEEEEEeCCCe--EEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEE
Confidence 888899999999999999999999999999 99999999999999999999999999999765 455544 6999999
Q ss_pred EEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEE--EeCCCcEEEEEcCCCceeEEe-cCcCCCCEEEEEEcCCCCEEE
Q psy13969 313 FDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSS--GGADGSIMFWHVGADKEVGCI-PQAHDNIIWTMAWHPLGHILA 389 (877)
Q Consensus 313 wd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~s--gs~dg~I~iwd~~~~~~~~~~-~~~h~~~V~~v~~sp~g~~l~ 389 (877)
||+++ ...+..+. |...|++++|++++. +|++ ++.|+.|+|||+.+....... ...|...|++++|++++.+|+
T Consensus 289 ~d~~~-~~~~~~~~-~~~~v~~~~~s~~~~-~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~ 365 (401)
T 4aez_A 289 WNAAT-GARVNTVD-AGSQVTSLIWSPHSK-EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILS 365 (401)
T ss_dssp EETTT-CCEEEEEE-CSSCEEEEEECSSSS-EEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEE
T ss_pred EECCC-CCEEEEEe-CCCcEEEEEECCCCC-eEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEE
Confidence 99997 45666665 677899999999998 5555 348999999999886555442 257999999999999999999
Q ss_pred EEEcCCeEEEEeCCCC
Q psy13969 390 TGSNDHASKFWTRNRL 405 (877)
Q Consensus 390 sg~~dg~v~iwd~~~~ 405 (877)
+++.|+.|+||++...
T Consensus 366 s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 366 TAASDENLKFWRVYDG 381 (401)
T ss_dssp EECTTSEEEEEECCC-
T ss_pred EEeCCCcEEEEECCCC
Confidence 9999999999999764
No 77
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.98 E-value=2.6e-31 Score=301.95 Aligned_cols=242 Identities=18% Similarity=0.249 Sum_probs=200.1
Q ss_pred ccCCEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCcceEEEcc---CCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCe
Q psy13969 158 HDCAVRHMVWSH-NGLWMVTSDHQGYIKYWQSNMNNVKTFQG---HKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCT 233 (877)
Q Consensus 158 h~~~V~~l~~sp-d~~~l~sg~~dg~v~iwd~~~~~~~~~~~---h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~ 233 (877)
|...|++|+|+| ++++|++++.|++|+|||++...+..+.. +...|.+++|++++.+|++++.|++|++||+. .+
T Consensus 163 H~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~ 241 (435)
T 4e54_B 163 AGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GK 241 (435)
T ss_dssp SSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SC
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cc
Confidence 889999999998 78999999999999999998876665543 33467899999999999999999999999985 46
Q ss_pred eeEEeccCCCCeEEEEEcCCCC-EEEEEecCCcccEEEEcCCCCceeEE---eccCCCCeeEEEEccCCCeEEEEeCCCe
Q psy13969 234 EEKVLRGHGADVKCVDWHPYKS-LIVSGSKDNQQPVKLWDPKAGQALAT---LHAHKSTVMDLAWNQNGNWLVTASRDHL 309 (877)
Q Consensus 234 ~~~~l~~h~~~v~~v~~sp~~~-~l~sgs~dg~~~I~iwd~~~~~~~~~---~~~h~~~V~~l~~sp~g~~l~s~s~Dg~ 309 (877)
.+..+..|...|++|+|+|++. +|++++.|+. |+|||+++.+.... ...|...|++|+|+|++.+|++++.|++
T Consensus 242 ~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~--v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~ 319 (435)
T 4e54_B 242 ELWNLRMHKKKVTHVALNPCCDWFLATASVDQT--VKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE 319 (435)
T ss_dssp BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSB--CCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC
T ss_pred eeEEEecccceEEeeeecCCCceEEEEecCcce--eeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE
Confidence 6778889999999999999875 7889999998 99999987654433 3579999999999999999999999999
Q ss_pred EEEEEcCCCCcceEEEecCCC------CeEEEEEcCCCCcEEEEE-----------eCCCcEEEEEcCCCceeEEecCcC
Q psy13969 310 LKVFDIRNLSSEVQTFRGHKK------EASAVAWHPQHEGLFSSG-----------GADGSIMFWHVGADKEVGCIPQAH 372 (877)
Q Consensus 310 I~iwd~~~~~~~~~~~~~h~~------~v~~i~~~p~~~~~l~sg-----------s~dg~I~iwd~~~~~~~~~~~~~h 372 (877)
|+|||+++ ......+..|.. .+..++|++++..++++. ..++.|+|||+.+++.+..+...|
T Consensus 320 i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~ 398 (435)
T 4e54_B 320 IRVYSASQ-WDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPE 398 (435)
T ss_dssp EEEEESSS-SSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSS
T ss_pred EEEEECCC-CccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCC
Confidence 99999988 445555555442 233456777766333322 234679999999999998887788
Q ss_pred CCCEEEE-EEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 373 DNIIWTM-AWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 373 ~~~V~~v-~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
...|.++ +|+|++.+|++++ |+.|+||++..
T Consensus 399 ~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~ 430 (435)
T 4e54_B 399 SSGISSLNEFNPMGDTLASAM-GYHILIWSQQE 430 (435)
T ss_dssp CCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-
T ss_pred CCcEEEEEEECCCCCEEEEEc-CCcEEEEECCc
Confidence 8889887 6999999999876 88999999875
No 78
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.9e-29 Score=271.89 Aligned_cols=235 Identities=20% Similarity=0.352 Sum_probs=211.6
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC----cceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCC
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM----NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRC 232 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~----~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~ 232 (877)
.|...|.+++|++++++|++++.|+.|++|++.. ..+..+..|...|.+++| ++++|++++.|+.|++|| ..
T Consensus 57 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~ 132 (313)
T 3odt_A 57 TGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EG 132 (313)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TT
T ss_pred cCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CC
Confidence 4889999999999999999999999999999654 346788899999999999 578999999999999999 66
Q ss_pred eeeEEeccCCCCeEEEEEcC-CCCEEEEEecCCcccEEEEcCCCCceeEEecc-CCCCeeEEEEccCCCeEEEEeCCCeE
Q psy13969 233 TEEKVLRGHGADVKCVDWHP-YKSLIVSGSKDNQQPVKLWDPKAGQALATLHA-HKSTVMDLAWNQNGNWLVTASRDHLL 310 (877)
Q Consensus 233 ~~~~~l~~h~~~v~~v~~sp-~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~-h~~~V~~l~~sp~g~~l~s~s~Dg~I 310 (877)
+.+..+..|...|.+++|++ ++++|++++.|+. |++|| ..+.+..+.. |...|.+++|++++. |++++.|+.|
T Consensus 133 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i 207 (313)
T 3odt_A 133 SLVYNLQAHNASVWDAKVVSFSENKFLTASADKT--IKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLI 207 (313)
T ss_dssp EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSC--EEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEE
T ss_pred cEEEecccCCCceeEEEEccCCCCEEEEEECCCC--EEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeE
Confidence 78888889999999999998 8899999999999 99999 4556667766 899999999999988 9999999999
Q ss_pred EEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEE
Q psy13969 311 KVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILAT 390 (877)
Q Consensus 311 ~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~s 390 (877)
++||+++ ...+..+..|...|++++|++++. |++++.|+.|++||+.+.+.+..+ ..|...|++++|+++++ |++
T Consensus 208 ~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~--l~~~~~dg~v~iwd~~~~~~~~~~-~~~~~~i~~~~~~~~~~-~~~ 282 (313)
T 3odt_A 208 KLVDMHT-GDVLRTYEGHESFVYCIKLLPNGD--IVSCGEDRTVRIWSKENGSLKQVI-TLPAISIWSVDCMSNGD-IIV 282 (313)
T ss_dssp EEEETTT-CCEEEEEECCSSCEEEEEECTTSC--EEEEETTSEEEEECTTTCCEEEEE-ECSSSCEEEEEECTTSC-EEE
T ss_pred EEEECCc-hhhhhhhhcCCceEEEEEEecCCC--EEEEecCCEEEEEECCCCceeEEE-eccCceEEEEEEccCCC-EEE
Confidence 9999998 577888999999999999999984 788999999999999999988887 67888999999999998 667
Q ss_pred EEcCCeEEEEeCCCC
Q psy13969 391 GSNDHASKFWTRNRL 405 (877)
Q Consensus 391 g~~dg~v~iwd~~~~ 405 (877)
++.|+.|++|+++..
T Consensus 283 ~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 283 GSSDNLVRIFSQEKS 297 (313)
T ss_dssp EETTSCEEEEESCGG
T ss_pred EeCCCcEEEEeCCCC
Confidence 999999999999753
No 79
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=9.4e-30 Score=291.40 Aligned_cols=276 Identities=20% Similarity=0.380 Sum_probs=236.9
Q ss_pred eccCC-EEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCee
Q psy13969 157 AHDCA-VRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTE 234 (877)
Q Consensus 157 ~h~~~-V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~ 234 (877)
.|... ++++.| ++++|++++.|++|++||+... .+..+..|...|++++|++++ +|++++.|++|++||+.+++.
T Consensus 119 ~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~ 195 (464)
T 3v7d_B 119 GHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCC 195 (464)
T ss_dssp CCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEE
T ss_pred CCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcE
Confidence 57766 466666 5679999999999999997654 567788999999999999877 999999999999999999999
Q ss_pred eEEeccCCCCeEEEEEc--CCCCEEEEEecCCcccEEEEcCCCCce-----------------------eEEeccCCCCe
Q psy13969 235 EKVLRGHGADVKCVDWH--PYKSLIVSGSKDNQQPVKLWDPKAGQA-----------------------LATLHAHKSTV 289 (877)
Q Consensus 235 ~~~l~~h~~~v~~v~~s--p~~~~l~sgs~dg~~~I~iwd~~~~~~-----------------------~~~~~~h~~~V 289 (877)
+..+..|...|.+++|+ +++.+|++++.|+. |++||+++... +..+..|...|
T Consensus 196 ~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 273 (464)
T 3v7d_B 196 THVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNT--LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASV 273 (464)
T ss_dssp EEEECCCSSCEEEEEEEESSSCEEEEEEETTSC--EEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCE
T ss_pred EEEECCCCCccEEEEEecCCCCCEEEEEcCCCc--EEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceE
Confidence 99999999999999998 57789999999999 99999987652 45677888888
Q ss_pred eEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEec
Q psy13969 290 MDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIP 369 (877)
Q Consensus 290 ~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~ 369 (877)
.++ ++++++|++++.|+.|++||+++ ...+..+..|...|++++|++++. +|++++.|+.|++||+.+++.+..+
T Consensus 274 ~~~--~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~- 348 (464)
T 3v7d_B 274 RTV--SGHGNIVVSGSYDNTLIVWDVAQ-MKCLYILSGHTDRIYSTIYDHERK-RCISASMDTTIRIWDLENGELMYTL- 348 (464)
T ss_dssp EEE--EEETTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTTEEEEEE-
T ss_pred EEE--cCCCCEEEEEeCCCeEEEEECCC-CcEEEEecCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCcEEEEE-
Confidence 887 56788999999999999999997 677888999999999999999988 8899999999999999999998888
Q ss_pred CcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeee
Q psy13969 370 QAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSV 449 (877)
Q Consensus 370 ~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~ 449 (877)
..|...|++++|+ +.+|++++.|+.|++||+........ ..+...+..+.|++++..++++. ++.+++
T Consensus 349 ~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~--dg~i~i 416 (464)
T 3v7d_B 349 QGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFS--------YHHTNLSAITTFYVSDNILVSGS--ENQFNI 416 (464)
T ss_dssp CCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEE--------EECTTCCCEEEEEECSSEEEEEE--TTEEEE
T ss_pred eCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeee--------ecCCCCccEEEEEeCCCEEEEec--CCeEEE
Confidence 7899999999998 47999999999999999976432211 11223355667888889888875 889999
Q ss_pred cCCCC
Q psy13969 450 FPSSE 454 (877)
Q Consensus 450 ~~~~~ 454 (877)
|+..+
T Consensus 417 wd~~~ 421 (464)
T 3v7d_B 417 YNLRS 421 (464)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 98765
No 80
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=5.8e-31 Score=285.49 Aligned_cols=252 Identities=24% Similarity=0.391 Sum_probs=204.6
Q ss_pred EEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCe--eeEEeccCCCCeEEEEEcC--CCCEEEEEecCCcccEEE
Q psy13969 195 TFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCT--EEKVLRGHGADVKCVDWHP--YKSLIVSGSKDNQQPVKL 270 (877)
Q Consensus 195 ~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~--~~~~l~~h~~~v~~v~~sp--~~~~l~sgs~dg~~~I~i 270 (877)
.+.+|...|++|+|++++++||+++.|++|+|||+.+.. .+..+.+|...|++|+|++ ++++|++++.|++ |++
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~--v~i 85 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRK--VII 85 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSC--EEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCE--EEE
Confidence 456899999999999999999999999999999998764 4677889999999999986 4789999999999 999
Q ss_pred EcCCCC--ceeEEeccCCCCeeEEEEccC--CCeEEEEeCCCeEEEEEcCCCCc--ceEEEecCCCCeEEEEEcCCC---
Q psy13969 271 WDPKAG--QALATLHAHKSTVMDLAWNQN--GNWLVTASRDHLLKVFDIRNLSS--EVQTFRGHKKEASAVAWHPQH--- 341 (877)
Q Consensus 271 wd~~~~--~~~~~~~~h~~~V~~l~~sp~--g~~l~s~s~Dg~I~iwd~~~~~~--~~~~~~~h~~~v~~i~~~p~~--- 341 (877)
||++++ +.+..+..|...|++|+|+|+ +.+|++++.|++|+|||++.... ....+..|...|.+++|+|+.
T Consensus 86 Wd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 165 (316)
T 3bg1_A 86 WREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPG 165 (316)
T ss_dssp ECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-
T ss_pred EECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCc
Confidence 999986 356678889999999999997 78999999999999999986322 234566799999999999973
Q ss_pred -------------CcEEEEEeCCCcEEEEEcCCC---ceeEEecCcCCCCEEEEEEcCCC----CEEEEEEcCCeEEEEe
Q psy13969 342 -------------EGLFSSGGADGSIMFWHVGAD---KEVGCIPQAHDNIIWTMAWHPLG----HILATGSNDHASKFWT 401 (877)
Q Consensus 342 -------------~~~l~sgs~dg~I~iwd~~~~---~~~~~~~~~h~~~V~~v~~sp~g----~~l~sg~~dg~v~iwd 401 (877)
..+|++++.|++|+|||+... +.+..+ ..|...|++++|+|++ .+|++++.|++|+||+
T Consensus 166 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l-~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 166 SLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL-EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp -----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC-BCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred cccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec-ccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 137899999999999999755 344444 6899999999999986 8999999999999999
Q ss_pred CCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCC
Q psy13969 402 RNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSS 453 (877)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~ 453 (877)
+....... .....+..+...|++++|++++..|+++. .|+.+++|+..
T Consensus 245 ~~~~~~~~---~~~~~~~~~~~~v~~v~~sp~g~~las~~-~D~~v~lw~~~ 292 (316)
T 3bg1_A 245 CDDASSNT---WSPKLLHKFNDVVWHVSWSITANILAVSG-GDNKVTLWKES 292 (316)
T ss_dssp CSSTTCCC---CBCCEEEECSSCEEEEEECTTTCCEEEEE-SSSCEEEEEEC
T ss_pred ccCccccc---hhhhhhhcCCCcEEEEEEcCCCCEEEEEc-CCCeEEEEEEC
Confidence 87531110 00111234456799999999999998874 78999999754
No 81
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.8e-30 Score=291.71 Aligned_cols=280 Identities=18% Similarity=0.295 Sum_probs=231.1
Q ss_pred EEEEcCCCCEE-EEEeCCCeEEEEeCCC-----cceEEEccCCCCeeEEEEcC-CCCEEEEEECCCcEEEEeccCC----
Q psy13969 164 HMVWSHNGLWM-VTSDHQGYIKYWQSNM-----NNVKTFQGHKESIRGISFSP-SDSKFATCSDDGTVRVWDFYRC---- 232 (877)
Q Consensus 164 ~l~~spd~~~l-~sg~~dg~v~iwd~~~-----~~~~~~~~h~~~V~~i~~sp-~~~~l~sgs~Dg~I~iwd~~~~---- 232 (877)
.++++++...+ ++++.++.|+||+++. ..+..+.+|...|++++|++ ++++|++++.|++|+|||+.+.
T Consensus 39 ~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~ 118 (402)
T 2aq5_A 39 FCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL 118 (402)
T ss_dssp SEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS
T ss_pred cEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc
Confidence 46777765444 4578899999999754 24556789999999999999 8999999999999999999887
Q ss_pred ---eeeEEeccCCCCeEEEEEcCCC-CEEEEEecCCcccEEEEcCCCCceeEEe--ccCCCCeeEEEEccCCCeEEEEeC
Q psy13969 233 ---TEEKVLRGHGADVKCVDWHPYK-SLIVSGSKDNQQPVKLWDPKAGQALATL--HAHKSTVMDLAWNQNGNWLVTASR 306 (877)
Q Consensus 233 ---~~~~~l~~h~~~v~~v~~sp~~-~~l~sgs~dg~~~I~iwd~~~~~~~~~~--~~h~~~V~~l~~sp~g~~l~s~s~ 306 (877)
+.+..+..|...|.+++|+|++ ++|++++.|+. |++||+++++.+..+ ..|...|++++|++++++|++++.
T Consensus 119 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 196 (402)
T 2aq5_A 119 PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNV--ILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR 196 (402)
T ss_dssp CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSC--EEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET
T ss_pred ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCE--EEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec
Confidence 5678889999999999999998 69999999999 999999999999999 889999999999999999999999
Q ss_pred CCeEEEEEcCCCCcceEEE-ecCCCC-eEEEEEcCCCCcEEEEE---eCCCcEEEEEcCCCce-eEEecCcCCCCEEEEE
Q psy13969 307 DHLLKVFDIRNLSSEVQTF-RGHKKE-ASAVAWHPQHEGLFSSG---GADGSIMFWHVGADKE-VGCIPQAHDNIIWTMA 380 (877)
Q Consensus 307 Dg~I~iwd~~~~~~~~~~~-~~h~~~-v~~i~~~p~~~~~l~sg---s~dg~I~iwd~~~~~~-~~~~~~~h~~~V~~v~ 380 (877)
|+.|+|||+++ ...+..+ ..|... +.+++|++++. +|+++ +.|+.|+|||+++... +......|...|.+++
T Consensus 197 d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 274 (402)
T 2aq5_A 197 DKRVRVIEPRK-GTVVAEKDRPHEGTRPVHAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPF 274 (402)
T ss_dssp TSEEEEEETTT-TEEEEEEECSSCSSSCCEEEECSTTE-EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEE
T ss_pred CCcEEEEeCCC-CceeeeeccCCCCCcceEEEEcCCCc-EEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEE
Confidence 99999999998 5666676 678776 89999999977 78888 7899999999988664 3333346778899999
Q ss_pred EcCCCCEEEEEE-cCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCC
Q psy13969 381 WHPLGHILATGS-NDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 381 ~sp~g~~l~sg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~ 454 (877)
|++++.+|++++ .|+.|++||+......+..... ..+...+.++.|++++..+++. +..+++|....
T Consensus 275 ~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~----~~~~~~v~~~~~sp~~~~~~s~---~~~~~~~~l~~ 342 (402)
T 2aq5_A 275 FDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSM----FSSKESQRGMGYMPKRGLEVNK---CEIARFYKLHE 342 (402)
T ss_dssp EETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEE----ECCSSCCSEEEECCGGGSCGGG---TEEEEEEEEET
T ss_pred EcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecc----cccCCcccceEEecccccceec---ceeEEEEEcCC
Confidence 999999887554 7999999999864321211111 1134668899999988877653 45888887764
No 82
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.3e-30 Score=319.09 Aligned_cols=308 Identities=12% Similarity=0.108 Sum_probs=230.4
Q ss_pred ccCCeEEEEEccCCceee-----------------------ccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcce-EE
Q psy13969 140 MRCPIFSMTWTPEGRRLA-----------------------HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNV-KT 195 (877)
Q Consensus 140 ~~~~i~~~~~sp~g~~l~-----------------------h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~-~~ 195 (877)
+...|++++|+|++++|+ |...|++|+|++ +++|++++.|++|+|||+..... ..
T Consensus 16 h~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~ 94 (902)
T 2oaj_A 16 MSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTT 94 (902)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEE
T ss_pred CCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEE
Confidence 456788999999888773 677899999999 88999999999999999876554 44
Q ss_pred EccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeee-----------EEeccCCCCeEEEEEcCC-CCEEEEEecC
Q psy13969 196 FQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEE-----------KVLRGHGADVKCVDWHPY-KSLIVSGSKD 263 (877)
Q Consensus 196 ~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~-----------~~l~~h~~~v~~v~~sp~-~~~l~sgs~d 263 (877)
+ .|...|++++|+|++++|++++.|++|++||+.+.... ..+..|...|++|+|+|+ ..+|++++.|
T Consensus 95 ~-~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~d 173 (902)
T 2oaj_A 95 V-FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEY 173 (902)
T ss_dssp E-ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSS
T ss_pred E-cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCC
Confidence 4 47789999999999999999999999999999887653 234568899999999996 4789999999
Q ss_pred CcccEEEEcCCCCceeEEeccC------------------CCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEE-
Q psy13969 264 NQQPVKLWDPKAGQALATLHAH------------------KSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQT- 324 (877)
Q Consensus 264 g~~~I~iwd~~~~~~~~~~~~h------------------~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~- 324 (877)
+. | +||+++.+.+..+..| ...|++|+|+|++.+||+++.|++|+|||+++ ..++..
T Consensus 174 g~--v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~-g~~~~~r 249 (902)
T 2oaj_A 174 VT--L-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANS-GHMIMAR 249 (902)
T ss_dssp CE--E-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTT-CCEEEEE
T ss_pred Cc--E-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC-CcEEEEE
Confidence 98 9 9999999988888765 57799999999999999999999999999987 344432
Q ss_pred -E---ec-------------CCCCeEEEEEcC----CCCcEEEEEeCCC-----cEEEEE--------------------
Q psy13969 325 -F---RG-------------HKKEASAVAWHP----QHEGLFSSGGADG-----SIMFWH-------------------- 358 (877)
Q Consensus 325 -~---~~-------------h~~~v~~i~~~p----~~~~~l~sgs~dg-----~I~iwd-------------------- 358 (877)
+ .. |...|++++|++ ++..+|++++.|. .|.+|+
T Consensus 250 ~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~ 329 (902)
T 2oaj_A 250 TVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYA 329 (902)
T ss_dssp CSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHH
T ss_pred eecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhc
Confidence 2 11 344688999954 3334566664431 444444
Q ss_pred ---------------------------------------------------cCCCceeEE------ecCcCCCCEEE---
Q psy13969 359 ---------------------------------------------------VGADKEVGC------IPQAHDNIIWT--- 378 (877)
Q Consensus 359 ---------------------------------------------------~~~~~~~~~------~~~~h~~~V~~--- 378 (877)
+.++..+.. ....|...|++
T Consensus 330 ~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~ 409 (902)
T 2oaj_A 330 NPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMA 409 (902)
T ss_dssp SCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEE
T ss_pred CccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEE
Confidence 332211110 00112233444
Q ss_pred -------------------------------EEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCc-----ceee
Q psy13969 379 -------------------------------MAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGL-----AHCI 422 (877)
Q Consensus 379 -------------------------------v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~-----~~~~ 422 (877)
++|+|++++||+++.|++|++||+..........+.. .+ ..+.
T Consensus 410 s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~-~l~~~~~~~h~ 488 (902)
T 2oaj_A 410 ASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEV-NLSRTLNKAKE 488 (902)
T ss_dssp EEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEE-EHHHHTTCSSS
T ss_pred EEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEe-echhhcCCCCC
Confidence 4557889999999999999999997642110000000 00 1455
Q ss_pred eeeeeeeccCCCCeEEeccCCCCeeeecCCCCc
Q psy13969 423 TGVYNEEMELNDSAVIPGMGLEDEDSVFPSSEP 455 (877)
Q Consensus 423 ~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~~ 455 (877)
..|.+++|++|+.+|++++ .|+.+++|+....
T Consensus 489 ~~V~svafspdg~~LAsgs-~DgtV~lwd~~~~ 520 (902)
T 2oaj_A 489 LAVDKISFAAETLELAVSI-ETGDVVLFKYEVN 520 (902)
T ss_dssp CCEEEEEEETTTTEEEEEE-TTSCEEEEEEEEC
T ss_pred CceeEEEecCCCCeEEEEe-cCcEEEEEEecCc
Confidence 6799999999999999975 7899999987643
No 83
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=7.6e-29 Score=280.23 Aligned_cols=241 Identities=19% Similarity=0.440 Sum_probs=209.7
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCC-eee
Q psy13969 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRC-TEE 235 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~-~~~ 235 (877)
|...|++|+|++|+++||+|+.|++|+|||+... .+..+..|...|.+++|+ +.+|++++.|+.|++||+... ..+
T Consensus 146 ~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~ 223 (420)
T 4gga_A 146 PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHV 223 (420)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEE
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceee
Confidence 6778999999999999999999999999998764 567889999999999885 679999999999999998764 456
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCc----eeEEeccCCCCeeEEEEccCC-CeEEEE--eCCC
Q psy13969 236 KVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQ----ALATLHAHKSTVMDLAWNQNG-NWLVTA--SRDH 308 (877)
Q Consensus 236 ~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~----~~~~~~~h~~~V~~l~~sp~g-~~l~s~--s~Dg 308 (877)
..+..|...+.++.|++++++|++++.|+. |++||+.+++ .+..+..|...|.+++|++++ .+|+++ +.|+
T Consensus 224 ~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~--v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~ 301 (420)
T 4gga_A 224 ATLSGHSQEVCGLRWAPDGRHLASGGNDNL--VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR 301 (420)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSC--EEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTC
T ss_pred EEecccccceeeeeecCCCCeeeeeecccc--ceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCC
Confidence 778899999999999999999999999999 9999998764 456777899999999999965 455543 5799
Q ss_pred eEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEE-eCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCE
Q psy13969 309 LLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSG-GADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHI 387 (877)
Q Consensus 309 ~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sg-s~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~ 387 (877)
+|+|||+++ ...+..+.. ...+.++.|++++..++++. +.|+.|+|||+.+.+++..+ .+|...|++|+|+|++.+
T Consensus 302 ~I~iwd~~t-~~~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l-~gH~~~V~~l~~spdg~~ 378 (420)
T 4gga_A 302 HIRIWNVCS-GACLSAVDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL-KGHTSRVLSLTMSPDGAT 378 (420)
T ss_dssp EEEEEETTT-TEEEEEEEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSC
T ss_pred EEEEEeCCc-cccceeecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEE-cCCCCCEEEEEEcCCCCE
Confidence 999999998 566666664 46789999999998555443 37999999999999999988 789999999999999999
Q ss_pred EEEEEcCCeEEEEeCCCC
Q psy13969 388 LATGSNDHASKFWTRNRL 405 (877)
Q Consensus 388 l~sg~~dg~v~iwd~~~~ 405 (877)
|||++.|++|+|||+...
T Consensus 379 l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 379 VASAAADETLRLWRCFEL 396 (420)
T ss_dssp EEEEETTTEEEEECCSCS
T ss_pred EEEEecCCeEEEEECCCC
Confidence 999999999999998653
No 84
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.3e-30 Score=290.43 Aligned_cols=259 Identities=14% Similarity=0.186 Sum_probs=218.1
Q ss_pred CCccCCeEEEEEcc-CCcee-----------------------------eccCCEEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy13969 138 NKMRCPIFSMTWTP-EGRRL-----------------------------AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQ 187 (877)
Q Consensus 138 ~~~~~~i~~~~~sp-~g~~l-----------------------------~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd 187 (877)
..+...|.+++|+| ++.+| .|...|++|+|++++++|++++.|+.|+|||
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd 139 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLK 139 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEE
Confidence 44567899999999 88777 2788899999999999999999999999999
Q ss_pred CC----CcceEEEc----------c--CCCCeeEEE--EcCCCCEEEEEECCCcEEEEeccCCeeeEEecc--CCCCeEE
Q psy13969 188 SN----MNNVKTFQ----------G--HKESIRGIS--FSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRG--HGADVKC 247 (877)
Q Consensus 188 ~~----~~~~~~~~----------~--h~~~V~~i~--~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~--h~~~v~~ 247 (877)
+. ...+..+. . +...+.++. +++++.+|++++.|++|++||+.+.+.+..+.. |...|++
T Consensus 140 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~ 219 (437)
T 3gre_A 140 VNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSS 219 (437)
T ss_dssp EEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEE
T ss_pred eccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEE
Confidence 73 22222221 1 566777777 567899999999999999999999999999988 8899999
Q ss_pred EEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEec-cCCCCeeEEEEcc----CCCeEEEEeCCCeEEEEEcCCCCcce
Q psy13969 248 VDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLH-AHKSTVMDLAWNQ----NGNWLVTASRDHLLKVFDIRNLSSEV 322 (877)
Q Consensus 248 v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~-~h~~~V~~l~~sp----~g~~l~s~s~Dg~I~iwd~~~~~~~~ 322 (877)
++|++++++|++++.|+. |++||+++++.+..+. .|...|++++|++ ++.+|++++.|++|+|||+++ ...+
T Consensus 220 ~~~s~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~ 296 (437)
T 3gre_A 220 ICIDEECCVLILGTTRGI--IDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK-GHCQ 296 (437)
T ss_dssp EEECTTSCEEEEEETTSC--EEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTT-TEEE
T ss_pred EEECCCCCEEEEEcCCCe--EEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCC-CcEE
Confidence 999999999999999999 9999999999988886 7888999997665 577999999999999999987 4555
Q ss_pred EEEec--------------------------CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecC------
Q psy13969 323 QTFRG--------------------------HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ------ 370 (877)
Q Consensus 323 ~~~~~--------------------------h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~------ 370 (877)
..+.. |...|++++|+ ++ .+|++++.|+.|++||+.+.+.+..+..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 374 (437)
T 3gre_A 297 YAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND-KILLTDEATSSIVMFSLNELSSSKAVISPSRFSD 374 (437)
T ss_dssp EEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT-EEEEEEGGGTEEEEEETTCGGGCEEEECC--CCC
T ss_pred EEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc-eEEEecCCCCeEEEEECCCcccceEEecccccCc
Confidence 55543 55568889999 55 4899999999999999998877665532
Q ss_pred ------------------------------cCCCCEEEEEEcCC--CCEEEEEEcCCeEEEEe
Q psy13969 371 ------------------------------AHDNIIWTMAWHPL--GHILATGSNDHASKFWT 401 (877)
Q Consensus 371 ------------------------------~h~~~V~~v~~sp~--g~~l~sg~~dg~v~iwd 401 (877)
.|...|++|+|+++ ..+|++++.||.|+||+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 375 VFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred eEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 18899999999998 78999999999999995
No 85
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=1.7e-29 Score=310.41 Aligned_cols=260 Identities=24% Similarity=0.407 Sum_probs=231.1
Q ss_pred ccCCeEEEEEccCCcee------------------------eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ceE
Q psy13969 140 MRCPIFSMTWTPEGRRL------------------------AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NVK 194 (877)
Q Consensus 140 ~~~~i~~~~~sp~g~~l------------------------~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~~ 194 (877)
+...|.+++|+|++.++ .|...|++++|++++++|++++.|+.|+||++.+. .+.
T Consensus 12 h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~ 91 (814)
T 3mkq_A 12 RSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV 91 (814)
T ss_dssp ECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 34568888888888777 28899999999999999999999999999997654 567
Q ss_pred EEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCC-eeeEEeccCCCCeEEEEEcC-CCCEEEEEecCCcccEEEEc
Q psy13969 195 TFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRC-TEEKVLRGHGADVKCVDWHP-YKSLIVSGSKDNQQPVKLWD 272 (877)
Q Consensus 195 ~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~-~~~~~l~~h~~~v~~v~~sp-~~~~l~sgs~dg~~~I~iwd 272 (877)
.+..|...|++++|++++.+|++++.|++|++||+.+. .....+..|...|.+++|+| ++++|++++.|+. |++||
T Consensus 92 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~--v~vwd 169 (814)
T 3mkq_A 92 DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT--VKVWS 169 (814)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE--EEEEE
T ss_pred EEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCe--EEEEE
Confidence 78889999999999999999999999999999999886 67788889999999999999 7889999999998 99999
Q ss_pred CCCCceeEEeccCC-CCeeEEEEcc--CCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEe
Q psy13969 273 PKAGQALATLHAHK-STVMDLAWNQ--NGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGG 349 (877)
Q Consensus 273 ~~~~~~~~~~~~h~-~~V~~l~~sp--~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs 349 (877)
+.+......+..+. ..|.+++|++ ++.+|++++.|+.|++||+++ ...+..+..|...|++++|+|++. +|++++
T Consensus 170 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~ 247 (814)
T 3mkq_A 170 LGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT-KSCVATLEGHMSNVSFAVFHPTLP-IIISGS 247 (814)
T ss_dssp TTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSSS-EEEEEE
T ss_pred CCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCC-EEEEEe
Confidence 99888777776655 8999999999 999999999999999999987 577888899999999999999998 889999
Q ss_pred CCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCE-EEEEEcCCeEEEEeCCC
Q psy13969 350 ADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHI-LATGSNDHASKFWTRNR 404 (877)
Q Consensus 350 ~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~-l~sg~~dg~v~iwd~~~ 404 (877)
.|+.|++||+.+.+.+..+ ..|...|++++|+|++.. +++++.|+.+.+|++..
T Consensus 248 ~dg~v~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 248 EDGTLKIWNSSTYKVEKTL-NVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp TTSCEEEEETTTCSEEEEE-CCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred CCCeEEEEECCCCcEEEEe-ecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 9999999999999888887 678889999999999862 34445577788888764
No 86
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=1.5e-29 Score=287.36 Aligned_cols=280 Identities=20% Similarity=0.387 Sum_probs=235.4
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-cceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeee
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEE 235 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~-~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~ 235 (877)
.|...|+|++| ++++|++++.|+.|++||+.+ ..+..+..|...|++++| ++++|++++.|++|++||+.+++.+
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~ 206 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEML 206 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEE
Confidence 35677998887 789999999999999999765 456778899999999999 6889999999999999999999999
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCcee---EEeccCCCCeeEEEEccCCCeEEEEeCCCeEEE
Q psy13969 236 KVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQAL---ATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKV 312 (877)
Q Consensus 236 ~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~---~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~i 312 (877)
..+..|...|.+++|+ +.+|++++.|+. |++||+++...+ ..+..|...|.+++| ++++|++++.|++|++
T Consensus 207 ~~~~~h~~~v~~l~~~--~~~l~s~s~dg~--i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~v 280 (435)
T 1p22_A 207 NTLIHHCEAVLHLRFN--NGMMVTCSKDRS--IAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKV 280 (435)
T ss_dssp EEECCCCSCEEEEECC--TTEEEEEETTSC--EEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred EEEcCCCCcEEEEEEc--CCEEEEeeCCCc--EEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEE
Confidence 9999999999999997 459999999999 999999987765 677889999999999 6789999999999999
Q ss_pred EEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEE
Q psy13969 313 FDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGS 392 (877)
Q Consensus 313 wd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~ 392 (877)
||+++ ...+..+..|...|.+++|+. . +|++++.|+.|++||+++++.+..+ ..|...|++++| ++.+|++++
T Consensus 281 wd~~~-~~~~~~~~~~~~~v~~~~~~~--~-~l~~g~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~~~~--~~~~l~sg~ 353 (435)
T 1p22_A 281 WNTST-CEFVRTLNGHKRGIACLQYRD--R-LVVSGSSDNTIRLWDIECGACLRVL-EGHEELVRCIRF--DNKRIVSGA 353 (435)
T ss_dssp EETTT-CCEEEEEECCSSCEEEEEEET--T-EEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEC--CSSEEEEEE
T ss_pred EECCc-CcEEEEEcCCCCcEEEEEeCC--C-EEEEEeCCCeEEEEECCCCCEEEEE-eCCcCcEEEEEe--cCCEEEEEe
Confidence 99998 577888999999999999953 3 8999999999999999999998888 689999999999 678999999
Q ss_pred cCCeEEEEeCCCCCCCccc--ccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCCcc
Q psy13969 393 NDHASKFWTRNRLGDPMRD--RYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSEPL 456 (877)
Q Consensus 393 ~dg~v~iwd~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~~~ 456 (877)
.|+.|++||+......... ......+..+...|.++.| ++..++++ +.|+.+++|+.....
T Consensus 354 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~-s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 354 YDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSS-SHDDTILIWDFLNDP 416 (435)
T ss_dssp TTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEEC-CSSSEEEEEC-----
T ss_pred CCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEE-eCCCEEEEEECCCCC
Confidence 9999999998643321110 0122233455667888888 56777776 479999999887643
No 87
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=1.7e-29 Score=299.62 Aligned_cols=277 Identities=18% Similarity=0.259 Sum_probs=238.4
Q ss_pred eccCC-EEEEEEcC--CCCEEEEEeCCCeEEEEeCC---------CcceEEEccCCCCeeEEEEcCCCCEEEEEECC---
Q psy13969 157 AHDCA-VRHMVWSH--NGLWMVTSDHQGYIKYWQSN---------MNNVKTFQGHKESIRGISFSPSDSKFATCSDD--- 221 (877)
Q Consensus 157 ~h~~~-V~~l~~sp--d~~~l~sg~~dg~v~iwd~~---------~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~D--- 221 (877)
.|... |++++|+| ++++|++++.|+.|+||++. ...+..+..|...|++++|++++++|++++.+
T Consensus 61 ~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~ 140 (615)
T 1pgu_A 61 GHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDN 140 (615)
T ss_dssp TTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSC
T ss_pred cCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCC
Confidence 58889 99999999 99999999999999999984 24566778899999999999999999999988
Q ss_pred -CcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCC-EEEEEecCCcccEEEEcCCCCceeEEeccCCC---CeeEEEEcc
Q psy13969 222 -GTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKS-LIVSGSKDNQQPVKLWDPKAGQALATLHAHKS---TVMDLAWNQ 296 (877)
Q Consensus 222 -g~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~-~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~---~V~~l~~sp 296 (877)
+.|++|| +.+.+..+..|...|++++|++++. +|++++.|+. |++||+.+.+.+..+..|.. .|++++|+|
T Consensus 141 ~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 216 (615)
T 1pgu_A 141 FGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGS--VVFYQGPPFKFSASDRTHHKQGSFVRDVEFSP 216 (615)
T ss_dssp SEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTE--EEEEETTTBEEEEEECSSSCTTCCEEEEEECS
T ss_pred ccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCc--EEEEeCCCcceeeeecccCCCCceEEEEEECC
Confidence 6888888 5677888999999999999999997 8999999998 99999999999999999999 999999999
Q ss_pred C-CCeEEEEeCCCeEEEEEcCCCCcceEEE-e---cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCc
Q psy13969 297 N-GNWLVTASRDHLLKVFDIRNLSSEVQTF-R---GHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQA 371 (877)
Q Consensus 297 ~-g~~l~s~s~Dg~I~iwd~~~~~~~~~~~-~---~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~ 371 (877)
+ +++|++++.|+.|++||+++ ...+..+ . .|...|.+++|+ ++. +|++++.|+.|++||+.+.+.+..+...
T Consensus 217 ~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 293 (615)
T 1pgu_A 217 DSGEFVITVGSDRKISCFDGKS-GEFLKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRVWDVTTSKCVQKWTLD 293 (615)
T ss_dssp TTCCEEEEEETTCCEEEEETTT-CCEEEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCCCEEEEEeCCCeEEEEECCC-CCEeEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 9 99999999999999999987 5666777 5 899999999999 666 8899999999999999999888777322
Q ss_pred ---CCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeee
Q psy13969 372 ---HDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDS 448 (877)
Q Consensus 372 ---h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~ 448 (877)
+...+.++.|+ ++.+|++++.|+.|++||+.... . ...+..+...+.++.| ++ ++++ +.++.++
T Consensus 294 ~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~-~------~~~~~~~~~~v~~~~~-~~---l~~~-~~dg~i~ 360 (615)
T 1pgu_A 294 KQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDE-V------LKTISGHNKGITALTV-NP---LISG-SYDGRIM 360 (615)
T ss_dssp TTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEE-E------EEEECCCSSCEEEEET-TT---TEEE-ETTSCEE
T ss_pred CCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCc-E------EEEEeCCCCCEEEEEe-cC---cEEE-CCCCeEE
Confidence 24678899997 88999999999999999987521 1 1223345667888888 66 4444 4688888
Q ss_pred ecCCC
Q psy13969 449 VFPSS 453 (877)
Q Consensus 449 ~~~~~ 453 (877)
+|+..
T Consensus 361 ~w~~~ 365 (615)
T 1pgu_A 361 EWSSS 365 (615)
T ss_dssp ETTTT
T ss_pred EEEch
Confidence 88765
No 88
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=1.7e-29 Score=299.60 Aligned_cols=285 Identities=14% Similarity=0.180 Sum_probs=242.9
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-----ceEEEccCCCC-eeEEEEcC--CCCEEEEEECCCcEEEEe
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-----NVKTFQGHKES-IRGISFSP--SDSKFATCSDDGTVRVWD 228 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-----~~~~~~~h~~~-V~~i~~sp--~~~~l~sgs~Dg~I~iwd 228 (877)
.|...|++++|+||+++|++++ ++.|+||++... .+..+..|... |++++|+| ++++|++++.|++|+|||
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~ 94 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWG 94 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEE
T ss_pred CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEe
Confidence 4788899999999999999988 889999998764 67889999999 99999999 999999999999999999
Q ss_pred ccCC--------eeeEEeccCCCCeEEEEEcCCCCEEEEEecC----CcccEEEEcCCCCceeEEeccCCCCeeEEEEcc
Q psy13969 229 FYRC--------TEEKVLRGHGADVKCVDWHPYKSLIVSGSKD----NQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQ 296 (877)
Q Consensus 229 ~~~~--------~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~d----g~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp 296 (877)
+.++ ..+..+..|...|.+++|++++++|++++.+ +. |++|| +.+.+..+..|...|++++|++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~--v~~~d--~~~~~~~~~~~~~~v~~~~~~~ 170 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGV--FISWD--SGNSLGEVSGHSQRINACHLKQ 170 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEE--EEETT--TCCEEEECCSCSSCEEEEEECS
T ss_pred CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccE--EEEEE--CCCcceeeecCCccEEEEEECC
Confidence 9744 6677888899999999999999999999987 45 88998 5677889999999999999999
Q ss_pred CCC-eEEEEeCCCeEEEEEcCCCCcceEEEecCCC---CeEEEEEcCC-CCcEEEEEeCCCcEEEEEcCCCceeEEecC-
Q psy13969 297 NGN-WLVTASRDHLLKVFDIRNLSSEVQTFRGHKK---EASAVAWHPQ-HEGLFSSGGADGSIMFWHVGADKEVGCIPQ- 370 (877)
Q Consensus 297 ~g~-~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~---~v~~i~~~p~-~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~- 370 (877)
++. +|++++.|+.|++||+.. ...+..+..|.. .|++++|+|+ +. +|++++.|+.|++||+.+.+.+..+..
T Consensus 171 ~~~~~l~~~~~d~~v~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 248 (615)
T 1pgu_A 171 SRPMRSMTVGDDGSVVFYQGPP-FKFSASDRTHHKQGSFVRDVEFSPDSGE-FVITVGSDRKISCFDGKSGEFLKYIEDD 248 (615)
T ss_dssp SSSCEEEEEETTTEEEEEETTT-BEEEEEECSSSCTTCCEEEEEECSTTCC-EEEEEETTCCEEEEETTTCCEEEECCBT
T ss_pred CCCcEEEEEeCCCcEEEEeCCC-cceeeeecccCCCCceEEEEEECCCCCC-EEEEEeCCCeEEEEECCCCCEeEEeccc
Confidence 987 899999999999999987 677888999999 9999999999 66 889999999999999999998887745
Q ss_pred --cCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeee
Q psy13969 371 --AHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDS 448 (877)
Q Consensus 371 --~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~ 448 (877)
.|...|++++|+ ++.+|++++.|+.|++||+...... ....... ......+..+.+. ++..++++. .++.++
T Consensus 249 ~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~-~~~~~~~--~~~~~~~~~~~~~-~~~~l~~~~-~~g~i~ 322 (615)
T 1pgu_A 249 QEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCV-QKWTLDK--QQLGNQQVGVVAT-GNGRIISLS-LDGTLN 322 (615)
T ss_dssp TBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEE-EEEECCT--TCGGGCEEEEEEE-ETTEEEEEE-TTSCEE
T ss_pred ccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEE-EEEcCCC--CcccCceeEEEeC-CCCeEEEEE-CCCCEE
Confidence 899999999999 9999999999999999999753221 1111000 1112335556665 677777764 688999
Q ss_pred ecCCCC
Q psy13969 449 VFPSSE 454 (877)
Q Consensus 449 ~~~~~~ 454 (877)
+|+...
T Consensus 323 ~~d~~~ 328 (615)
T 1pgu_A 323 FYELGH 328 (615)
T ss_dssp EEETTE
T ss_pred EEECCC
Confidence 998765
No 89
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=2e-29 Score=324.48 Aligned_cols=293 Identities=19% Similarity=0.311 Sum_probs=250.3
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-cceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeee
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEE 235 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~-~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~ 235 (877)
.|...|++++|++|+++|++++.|++|+|||+.+ ..+..+..|...|++++|++++++|++++.|++|+|||+.+++.+
T Consensus 613 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~ 692 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLV 692 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred cccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceE
Confidence 6999999999999999999999999999999766 456788999999999999999999999999999999999999999
Q ss_pred EEeccCCCCeEEEEEcC--CCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEE
Q psy13969 236 KVLRGHGADVKCVDWHP--YKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVF 313 (877)
Q Consensus 236 ~~l~~h~~~v~~v~~sp--~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iw 313 (877)
..+..|...|.+++|++ +..++++++.|+. |++||+++++.+..+..|...|++++|+|++++|++++.|++|++|
T Consensus 693 ~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~--v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vw 770 (1249)
T 3sfz_A 693 HTYDEHSEQVNCCHFTNKSNHLLLATGSNDFF--LKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLW 770 (1249)
T ss_dssp EEEECCSSCEEEEEECSSSSCCEEEEEETTSC--EEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEE
T ss_pred EEEcCCCCcEEEEEEecCCCceEEEEEeCCCe--EEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEE
Confidence 99999999999999999 4568999999999 9999999999999999999999999999999999999999999999
Q ss_pred EcCCCCcceE-------------------------------------------------------EEecCCCCeEEEEEc
Q psy13969 314 DIRNLSSEVQ-------------------------------------------------------TFRGHKKEASAVAWH 338 (877)
Q Consensus 314 d~~~~~~~~~-------------------------------------------------------~~~~h~~~v~~i~~~ 338 (877)
|+++.. ... ....|...|.+++|+
T Consensus 771 d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~s 849 (1249)
T 3sfz_A 771 DVRSAN-ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFS 849 (1249)
T ss_dssp EGGGTE-EEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEEC
T ss_pred eCCCCc-ccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEc
Confidence 987521 111 112678899999999
Q ss_pred CCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccc------
Q psy13969 339 PQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDR------ 412 (877)
Q Consensus 339 p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~------ 412 (877)
|++. ++++++.|+.|++||+.+...+..+ ..|...|++++|++++++|++++.|+.|++|++..........
T Consensus 850 p~~~-~l~~~~~dg~v~vwd~~~~~~~~~~-~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~ 927 (1249)
T 3sfz_A 850 PYDH-LAVIALSQYCVELWNIDSRLKVADC-RGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEID 927 (1249)
T ss_dssp SSTT-EEEEECSSSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEE
T ss_pred CCCC-EEEEEeCCCeEEEEEcCCCceeeec-CCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceee
Confidence 9988 8899999999999999999888887 7899999999999999999999999999999975311100000
Q ss_pred ------------------------cccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCCc
Q psy13969 413 ------------------------YNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSEP 455 (877)
Q Consensus 413 ------------------------~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~~ 455 (877)
............+..+++++++..++++. .++.+.+|+....
T Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~-~~g~i~i~d~~~~ 993 (1249)
T 3sfz_A 928 VVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGD-EDGAIKIIELPNN 993 (1249)
T ss_dssp EEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEE-TTSCCEEEETTTT
T ss_pred EEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEc-CCCCEEEEEcCCC
Confidence 00000011123478889999999999875 6789999987653
No 90
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.8e-30 Score=299.66 Aligned_cols=243 Identities=14% Similarity=0.139 Sum_probs=204.4
Q ss_pred eccCCEEEEEEcCC------CCEEEEEeCCCeEEEEeCCCcc------------eEEEccCCCCeeEEEEcCCCCEEEEE
Q psy13969 157 AHDCAVRHMVWSHN------GLWMVTSDHQGYIKYWQSNMNN------------VKTFQGHKESIRGISFSPSDSKFATC 218 (877)
Q Consensus 157 ~h~~~V~~l~~spd------~~~l~sg~~dg~v~iwd~~~~~------------~~~~~~h~~~V~~i~~sp~~~~l~sg 218 (877)
.|...|.+|+|+|+ +.+||+++.|++|+|||+.... ...+..|...|++++|+++ .+|++|
T Consensus 205 ~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasg 283 (524)
T 2j04_B 205 HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCG 283 (524)
T ss_dssp ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEE
T ss_pred ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEE
Confidence 45788999999996 5799999999999999986542 2367889999999999975 589999
Q ss_pred ECCCcEEEEeccCCe-eeEEeccCCCCeEEE--EEcCCC-CEEEEEecCCcccEEEEcCCCCceeEEeccCCC--CeeEE
Q psy13969 219 SDDGTVRVWDFYRCT-EEKVLRGHGADVKCV--DWHPYK-SLIVSGSKDNQQPVKLWDPKAGQALATLHAHKS--TVMDL 292 (877)
Q Consensus 219 s~Dg~I~iwd~~~~~-~~~~l~~h~~~v~~v--~~sp~~-~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~--~V~~l 292 (877)
+.|++|+|||+.+.. ....+..|...|++| +|++++ .+|||++.|++ |+|||+++.+++..+..|.. .|.+|
T Consensus 284 s~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~t--vklWD~~~~~~~~~~~~~~~~~~v~~v 361 (524)
T 2j04_B 284 FKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGY--FYIFNPKDIATTKTTVSRFRGSNLVPV 361 (524)
T ss_dssp ETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSE--EEEECGGGHHHHCEEEEECSCCSCCCE
T ss_pred eCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCe--EEEEECCCCCcccccccccccCcccce
Confidence 999999999998764 455688999999999 578887 89999999999 99999999887777777654 58999
Q ss_pred EEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCC-----c----
Q psy13969 293 AWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGAD-----K---- 363 (877)
Q Consensus 293 ~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~-----~---- 363 (877)
+|+|++..|++++.|++|+|||++. ...+.++..|...|++|+|+|++. +|++++.|++|+|||+... +
T Consensus 362 ~fsp~~~~l~s~~~d~tv~lwd~~~-~~~~~~l~gH~~~V~sva~Sp~g~-~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~ 439 (524)
T 2j04_B 362 VYCPQIYSYIYSDGASSLRAVPSRA-AFAVHPLVSRETTITAIGVSRLHP-MVLAGSADGSLIITNAARRLLHGIKNSSA 439 (524)
T ss_dssp EEETTTTEEEEECSSSEEEEEETTC-TTCCEEEEECSSCEEEEECCSSCC-BCEEEETTTEEECCBSCSSTTTCC-----
T ss_pred EeCCCcCeEEEeCCCCcEEEEECcc-cccceeeecCCCceEEEEeCCCCC-eEEEEECCCEEEEEechHhhccccccCcc
Confidence 9999999999999999999999998 556677888999999999999998 7889999999999986321 0
Q ss_pred -----eeEE-----------------------------ecCcCCCCEEEEEEcCCC---CEEEEEEcCCeEEEEeCCC
Q psy13969 364 -----EVGC-----------------------------IPQAHDNIIWTMAWHPLG---HILATGSNDHASKFWTRNR 404 (877)
Q Consensus 364 -----~~~~-----------------------------~~~~h~~~V~~v~~sp~g---~~l~sg~~dg~v~iwd~~~ 404 (877)
.+.. ....|...|++|+|+|++ .+||+++.|++|+||++..
T Consensus 440 ~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 440 TQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp -CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred ceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 0100 013477789999999996 4999999999999999864
No 91
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.3e-29 Score=284.56 Aligned_cols=245 Identities=17% Similarity=0.349 Sum_probs=214.7
Q ss_pred eeccCCEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCc--------ceEEEccCCCCeeEEEEcCCC-CEEEEEECCCcEE
Q psy13969 156 LAHDCAVRHMVWSH-NGLWMVTSDHQGYIKYWQSNMN--------NVKTFQGHKESIRGISFSPSD-SKFATCSDDGTVR 225 (877)
Q Consensus 156 l~h~~~V~~l~~sp-d~~~l~sg~~dg~v~iwd~~~~--------~~~~~~~h~~~V~~i~~sp~~-~~l~sgs~Dg~I~ 225 (877)
.+|...|++++|++ ++++|++++.|+.|+||++... .+..+..|...|++|+|++++ ++|++++.|++|+
T Consensus 78 ~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~ 157 (402)
T 2aq5_A 78 CGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVIL 157 (402)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEE
T ss_pred ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEE
Confidence 36999999999999 9999999999999999997663 467888999999999999998 6999999999999
Q ss_pred EEeccCCeeeEEe--ccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEe-ccCCCC-eeEEEEccCCCeE
Q psy13969 226 VWDFYRCTEEKVL--RGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATL-HAHKST-VMDLAWNQNGNWL 301 (877)
Q Consensus 226 iwd~~~~~~~~~l--~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~-~~h~~~-V~~l~~sp~g~~l 301 (877)
|||+.+.+.+..+ ..|...|.+++|++++++|++++.|+. |++||+++++.+..+ ..|... +.+++|++++.+|
T Consensus 158 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 235 (402)
T 2aq5_A 158 VWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKR--VRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKIL 235 (402)
T ss_dssp EEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSE--EEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEE
T ss_pred EEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCc--EEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEE
Confidence 9999999999999 789999999999999999999999998 999999999999888 788776 9999999999999
Q ss_pred EEE---eCCCeEEEEEcCCCCcceEEEe-cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCce-eEEec-CcCCCC
Q psy13969 302 VTA---SRDHLLKVFDIRNLSSEVQTFR-GHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKE-VGCIP-QAHDNI 375 (877)
Q Consensus 302 ~s~---s~Dg~I~iwd~~~~~~~~~~~~-~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~-~~~~~-~~h~~~ 375 (877)
+++ +.|+.|+|||++.....+.... .|...|.+++|++++..++++++.|+.|+|||+.+.+. +..+. ..|...
T Consensus 236 ~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~ 315 (402)
T 2aq5_A 236 TTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKES 315 (402)
T ss_dssp EEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSC
T ss_pred EEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCc
Confidence 999 7999999999988555444443 57788999999999996667777899999999998874 33331 136689
Q ss_pred EEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 376 IWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 376 V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
|++++|+|++.++++ .++.+++|++..
T Consensus 316 v~~~~~sp~~~~~~s--~~~~~~~~~l~~ 342 (402)
T 2aq5_A 316 QRGMGYMPKRGLEVN--KCEIARFYKLHE 342 (402)
T ss_dssp CSEEEECCGGGSCGG--GTEEEEEEEEET
T ss_pred ccceEEeccccccee--cceeEEEEEcCC
Confidence 999999999988775 567999999864
No 92
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=2.1e-30 Score=287.02 Aligned_cols=281 Identities=10% Similarity=0.060 Sum_probs=215.7
Q ss_pred cCCEEEEEEcCCCCEEEEEeCC-------CeEEEEeCCCcc-----------eEEEccCCCCeeEEEEcCCCCEEEEEE-
Q psy13969 159 DCAVRHMVWSHNGLWMVTSDHQ-------GYIKYWQSNMNN-----------VKTFQGHKESIRGISFSPSDSKFATCS- 219 (877)
Q Consensus 159 ~~~V~~l~~spd~~~l~sg~~d-------g~v~iwd~~~~~-----------~~~~~~h~~~V~~i~~sp~~~~l~sgs- 219 (877)
..+|+|++|+||+++||+|+.+ ..|+||+++... ...+..|.+.|.+++++ ++.++++.
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 4579999999999999998653 359999965432 12466888999998885 55666654
Q ss_pred ----------CCCcEEEEeccCCeeeEE----e-----ccCCCCeEEEEEcCCCCEEEEEe--cCCcccEEEEcCCCCce
Q psy13969 220 ----------DDGTVRVWDFYRCTEEKV----L-----RGHGADVKCVDWHPYKSLIVSGS--KDNQQPVKLWDPKAGQA 278 (877)
Q Consensus 220 ----------~Dg~I~iwd~~~~~~~~~----l-----~~h~~~v~~v~~sp~~~~l~sgs--~dg~~~I~iwd~~~~~~ 278 (877)
.|++|++|++.+...... . ..+...+.+++|+||+++|++++ .|+. |+|||+++.+.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~--i~iwd~~~~~~ 169 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAI--MRIIDPSDLTE 169 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCE--EEEEETTTTEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCE--EEEeECCCCcE
Confidence 467899999865432211 1 12445689999999999987655 6777 99999999998
Q ss_pred eEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcce-EEEecCCCCeEEEEEcCCCCcEEEEEeCCC----c
Q psy13969 279 LATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEV-QTFRGHKKEASAVAWHPQHEGLFSSGGADG----S 353 (877)
Q Consensus 279 ~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~-~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg----~ 353 (877)
+..+. |...|++|+|+|++++|++++.|. +++|+..+..... .....|...|.+++|+|++. ++++++.|+ .
T Consensus 170 ~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~-~l~~~s~d~~~~~~ 246 (365)
T 4h5i_A 170 KFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSKINFIADDT-VLIAASLKKGKGIV 246 (365)
T ss_dssp EEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE-EEEEEEESSSCCEE
T ss_pred EEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC-EEEEEecCCcceeE
Confidence 88885 778899999999999999998665 5566655533332 33456888999999999988 777777776 6
Q ss_pred EEEEEcCCCcee----EEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeee
Q psy13969 354 IMFWHVGADKEV----GCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEE 429 (877)
Q Consensus 354 I~iwd~~~~~~~----~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 429 (877)
|++|++...... ..+ ..|...|++++|+|++++||+++.|++|+|||+.+... +.. .+..|...|++++
T Consensus 247 i~~~~~~~~~~~~~~~~~~-~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~-~~~-----~~~gH~~~V~~v~ 319 (365)
T 4h5i_A 247 LTKISIKSGNTSVLRSKQV-TNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSM-SKI-----FKQAHSFAITEVT 319 (365)
T ss_dssp EEEEEEETTEEEEEEEEEE-ESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE-EEE-----ETTSSSSCEEEEE
T ss_pred Eeecccccceecceeeeee-cCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcE-EEE-----ecCcccCCEEEEE
Confidence 888998766532 223 57888999999999999999999999999999976321 111 1235677899999
Q ss_pred ccCCCCeEEeccCCCCeeeecCCCC
Q psy13969 430 MELNDSAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 430 ~~~d~~~l~~~~g~d~~~~~~~~~~ 454 (877)
|++|+.+|++++ .|++++||+...
T Consensus 320 fSpdg~~laS~S-~D~tvrvw~ip~ 343 (365)
T 4h5i_A 320 ISPDSTYVASVS-AANTIHIIKLPL 343 (365)
T ss_dssp ECTTSCEEEEEE-TTSEEEEEECCT
T ss_pred ECCCCCEEEEEe-CCCeEEEEEcCC
Confidence 999999999986 799999998754
No 93
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=1.4e-28 Score=265.87 Aligned_cols=277 Identities=19% Similarity=0.404 Sum_probs=231.4
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEeCCCcce-EEE--ccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEe
Q psy13969 162 VRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNV-KTF--QGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVL 238 (877)
Q Consensus 162 V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~-~~~--~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l 238 (877)
+++|+||+++ +|+++ .|++|+|||+++..+ ..+ ..|...|++|+|++++++||+++.|++|+|||+.+++.+..+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 4567888775 66665 599999999877543 333 468889999999999999999999999999999999999999
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCC-ceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCC
Q psy13969 239 RGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG-QALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRN 317 (877)
Q Consensus 239 ~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~-~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~ 317 (877)
..|...+.++.+. +.+|++++.++. +++|+.... ..+..+..|...+.++.|++++++|++++.|++|+|||+++
T Consensus 106 ~~h~~~~~~~~~~--~~~l~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 106 TSHSARVGSLSWN--SYILSSGSRSGH--IHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp ECCSSCEEEEEEE--TTEEEEEETTSE--EEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred cCccceEEEeecC--CCEEEEEecCCc--eEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 9999988877665 679999999998 999998865 45677889999999999999999999999999999999986
Q ss_pred CC---cceEEEecCCCCeEEEEEcCCCCcEEE--EEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEE
Q psy13969 318 LS---SEVQTFRGHKKEASAVAWHPQHEGLFS--SGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGS 392 (877)
Q Consensus 318 ~~---~~~~~~~~h~~~v~~i~~~p~~~~~l~--sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~ 392 (877)
.. ........|...|.++++++++..+++ +++.+++|+|||.......... .+...|..++|++++..+++++
T Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~s 259 (318)
T 4ggc_A 182 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV--DAHSQVCSILWSPHYKELISGH 259 (318)
T ss_dssp BTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE--ECSSCEEEEEEETTTTEEEEEE
T ss_pred CcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc--cceeeeeeeeecccccceEEEE
Confidence 32 234566778889999999998887664 5567899999999988877665 5777899999999998887765
Q ss_pred --cCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCC
Q psy13969 393 --NDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 393 --~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~ 454 (877)
.|+.|+|||+.+.. . ...+..|...|.+++|++++.+|++++ .|+.+++|+..+
T Consensus 260 g~~d~~i~iwd~~~~~-~------~~~l~gH~~~V~~l~~spdg~~l~S~s-~D~~v~iWd~~~ 315 (318)
T 4ggc_A 260 GFAQNQLVIWKYPTMA-K------VAELKGHTSRVLSLTMSPDGATVASAA-ADETLRLWRCFE 315 (318)
T ss_dssp CTTTCCEEEEETTTCC-E------EEEECCCSSCEEEEEECTTSSCEEEEE-TTTEEEEECCSC
T ss_pred EcCCCEEEEEECCCCc-E------EEEEcCCCCCEEEEEEcCCCCEEEEEe-cCCeEEEEECCC
Confidence 79999999997632 2 123445777899999999999999874 899999998754
No 94
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=3.7e-29 Score=273.54 Aligned_cols=236 Identities=17% Similarity=0.186 Sum_probs=211.9
Q ss_pred eccCCEEEEEEcCCCC-EEEEEeCCCeEEEEeC-CCcceEEEcc--CCCCeeEEEEcCCCCEEEEEECCCcEEEEeccC-
Q psy13969 157 AHDCAVRHMVWSHNGL-WMVTSDHQGYIKYWQS-NMNNVKTFQG--HKESIRGISFSPSDSKFATCSDDGTVRVWDFYR- 231 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~-~l~sg~~dg~v~iwd~-~~~~~~~~~~--h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~- 231 (877)
.|...|++++|+++++ +|++++.|+.|++|++ .......+.. |...|++++|++ +.+|++++.|+.|++||+.+
T Consensus 54 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~ 132 (342)
T 1yfq_A 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNY 132 (342)
T ss_dssp ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHH
T ss_pred ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccccc
Confidence 5889999999999999 9999999999999999 8888888999 999999999999 99999999999999999987
Q ss_pred --------CeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCC-Cc--eeEEeccCCCCeeEEEEcc-CCC
Q psy13969 232 --------CTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKA-GQ--ALATLHAHKSTVMDLAWNQ-NGN 299 (877)
Q Consensus 232 --------~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~-~~--~~~~~~~h~~~V~~l~~sp-~g~ 299 (877)
.+.+..+. |...|.+++|+++. |++++.|+. |++||+++ .. .......|...|.+++|++ +++
T Consensus 133 ~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~--i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~ 207 (342)
T 1yfq_A 133 GDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQ--VQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE 207 (342)
T ss_dssp TTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTE--EEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC
T ss_pred ccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCe--EEEEECCccccccceeeecCCCCceeEEEECCCCCC
Confidence 66666666 88999999999876 999999998 99999998 54 3345567889999999999 999
Q ss_pred eEEEEeCCCeEEEEEcCCC-----CcceEEEecCCC---------CeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCcee
Q psy13969 300 WLVTASRDHLLKVFDIRNL-----SSEVQTFRGHKK---------EASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEV 365 (877)
Q Consensus 300 ~l~s~s~Dg~I~iwd~~~~-----~~~~~~~~~h~~---------~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~ 365 (877)
+|++++.|+.|+|||++.. ...+..+..|.. .|++++|+|++. +|++++.|+.|+|||+.+.+.+
T Consensus 208 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 208 GYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK-FLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp EEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC-CEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCC-EEEEecCCceEEEEcCccHhHh
Confidence 9999999999999999874 367788888866 999999999988 7889999999999999999988
Q ss_pred EEecCcC-CCCEEEEEEcCCCCEEEEEEcCCe-EEEEeC
Q psy13969 366 GCIPQAH-DNIIWTMAWHPLGHILATGSNDHA-SKFWTR 402 (877)
Q Consensus 366 ~~~~~~h-~~~V~~v~~sp~g~~l~sg~~dg~-v~iwd~ 402 (877)
..+ ..| ...|++++ +++.+|++++.|+. .+.|..
T Consensus 287 ~~~-~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 287 KNF-AKFNEDSVVKIA--CSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp EEC-CCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSSS
T ss_pred hhh-hcccCCCceEec--CCCCeEEEEecCCcccccccc
Confidence 887 566 99999999 99999999999998 666654
No 95
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=5.1e-29 Score=320.79 Aligned_cols=305 Identities=19% Similarity=0.288 Sum_probs=259.8
Q ss_pred CccCCeEEEEEccCCceee------------------------ccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ce
Q psy13969 139 KMRCPIFSMTWTPEGRRLA------------------------HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NV 193 (877)
Q Consensus 139 ~~~~~i~~~~~sp~g~~l~------------------------h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~ 193 (877)
.+...|++++|+|++++++ |...|++++|++++++|++++.|++|+|||+.+. .+
T Consensus 613 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~ 692 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLV 692 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred cccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceE
Confidence 4567899999999998882 8899999999999999999999999999997654 56
Q ss_pred EEEccCCCCeeEEEEcC--CCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEE
Q psy13969 194 KTFQGHKESIRGISFSP--SDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLW 271 (877)
Q Consensus 194 ~~~~~h~~~V~~i~~sp--~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iw 271 (877)
..+..|...|++++|++ +..+|++++.|++|++||+.+++.+..+..|...|++++|+|++++|++++.|+. |++|
T Consensus 693 ~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~--v~vw 770 (1249)
T 3sfz_A 693 HTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGT--LRLW 770 (1249)
T ss_dssp EEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSE--EEEE
T ss_pred EEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCe--EEEE
Confidence 78889999999999999 5568999999999999999999999999999999999999999999999999998 9999
Q ss_pred cCCCCceeEEe-------------------------------------------------------ccCCCCeeEEEEcc
Q psy13969 272 DPKAGQALATL-------------------------------------------------------HAHKSTVMDLAWNQ 296 (877)
Q Consensus 272 d~~~~~~~~~~-------------------------------------------------------~~h~~~V~~l~~sp 296 (877)
|+++.+....+ ..|...|.+++|++
T Consensus 771 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp 850 (1249)
T 3sfz_A 771 DVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSP 850 (1249)
T ss_dssp EGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECS
T ss_pred eCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcC
Confidence 98766443322 16778899999999
Q ss_pred CCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCce------------
Q psy13969 297 NGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKE------------ 364 (877)
Q Consensus 297 ~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~------------ 364 (877)
++.++++++.|++|++||+.+ ...+..+..|...|++++|+|++. +|++++.|+.|++||+.....
T Consensus 851 ~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg~-~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~ 928 (1249)
T 3sfz_A 851 YDHLAVIALSQYCVELWNIDS-RLKVADCRGHLSWVHGVMFSPDGS-SFLTASDDQTIRVWETKKVCKNSAIVLKQEIDV 928 (1249)
T ss_dssp STTEEEEECSSSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEEcCC-CceeeecCCCccceEEEEECCCCC-EEEEEeCCCeEEEEEccccceeeeecccceeeE
Confidence 999999999999999999998 677888999999999999999988 789999999999999753110
Q ss_pred -----------------eEE-------ecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcce
Q psy13969 365 -----------------VGC-------IPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAH 420 (877)
Q Consensus 365 -----------------~~~-------~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 420 (877)
+.. +...+...|++++|++++++|++++.|+.|++|++...... ..+..
T Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~-------~~~~~ 1001 (1249)
T 3sfz_A 929 VFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVF-------SSGVG 1001 (1249)
T ss_dssp EEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCE-------EECCC
T ss_pred EEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCcee-------eeccc
Confidence 000 00123567999999999999999999999999999764221 12335
Q ss_pred eeeeeeeeeccCCCCeEEeccCCCCeeeecCCCCc
Q psy13969 421 CITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSEP 455 (877)
Q Consensus 421 ~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~~ 455 (877)
|...|.++.|++++.+++++. .++.+++|+..+.
T Consensus 1002 h~~~v~~l~~s~dg~~l~s~~-~dg~i~vwd~~~~ 1035 (1249)
T 3sfz_A 1002 HKKAVRHIQFTADGKTLISSS-EDSVIQVWNWQTG 1035 (1249)
T ss_dssp CSSCCCCEEECSSSSCEEEEC-SSSBEEEEETTTT
T ss_pred CCCceEEEEECCCCCEEEEEc-CCCEEEEEECCCC
Confidence 566788999999999999874 7889999987653
No 96
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.7e-30 Score=309.41 Aligned_cols=247 Identities=23% Similarity=0.420 Sum_probs=216.6
Q ss_pred eeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC---cceEEEccCCCCeeEEEEcCC--CCEEEEEECCCcEEEEecc
Q psy13969 156 LAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM---NNVKTFQGHKESIRGISFSPS--DSKFATCSDDGTVRVWDFY 230 (877)
Q Consensus 156 l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~---~~~~~~~~h~~~V~~i~~sp~--~~~l~sgs~Dg~I~iwd~~ 230 (877)
-+|...|++++|++++++|++++.|+.|+||++.. ..+..+..|...|++++|+++ +++|++++.|++|+|||+.
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 85 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence 37999999999999999999999999999999753 346678899999999999987 8999999999999999999
Q ss_pred CCe--eeEEeccCCCCeEEEEEcCC--CCEEEEEecCCcccEEEEcCCCC--ceeEEeccCCCCeeEEEEcc--------
Q psy13969 231 RCT--EEKVLRGHGADVKCVDWHPY--KSLIVSGSKDNQQPVKLWDPKAG--QALATLHAHKSTVMDLAWNQ-------- 296 (877)
Q Consensus 231 ~~~--~~~~l~~h~~~v~~v~~sp~--~~~l~sgs~dg~~~I~iwd~~~~--~~~~~~~~h~~~V~~l~~sp-------- 296 (877)
+.. .+..+..|...|++++|+|+ +++|++++.|+. |++||+++. .....+..|...|++++|+|
T Consensus 86 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~--I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~ 163 (753)
T 3jro_A 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGK--VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (753)
T ss_dssp TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSE--EEEEECCSSSCCCCEEEECCSSCEEEEEECCCC------
T ss_pred CCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCc--EEEEEeecCCCcceeEeecCCCceEEEEecCcccccccc
Confidence 876 67778889999999999999 999999999998 999999877 34556778999999999999
Q ss_pred -----CCCeEEEEeCCCeEEEEEcCCCC---cceEEEecCCCCeEEEEEcCCC--CcEEEEEeCCCcEEEEEcCCCcee-
Q psy13969 297 -----NGNWLVTASRDHLLKVFDIRNLS---SEVQTFRGHKKEASAVAWHPQH--EGLFSSGGADGSIMFWHVGADKEV- 365 (877)
Q Consensus 297 -----~g~~l~s~s~Dg~I~iwd~~~~~---~~~~~~~~h~~~v~~i~~~p~~--~~~l~sgs~dg~I~iwd~~~~~~~- 365 (877)
++.+|++++.|++|++||++... ..+..+..|...|++++|+|+. ..+|++++.|+.|+|||+.+....
T Consensus 164 ~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~ 243 (753)
T 3jro_A 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW 243 (753)
T ss_dssp ---CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCC
T ss_pred cccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcc
Confidence 58999999999999999998743 4456778899999999999993 348999999999999999886421
Q ss_pred ---EEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 366 ---GCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 366 ---~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
......|...|++++|+|++.+|++++.|+.|+||+++.
T Consensus 244 ~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 244 KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp BCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred eeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 111245888999999999999999999999999999974
No 97
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=3.5e-29 Score=276.06 Aligned_cols=242 Identities=22% Similarity=0.376 Sum_probs=207.7
Q ss_pred eccCCEEEEEEcCC---CCEEEEEeCCCeEEEEeCCC-c-ce-EEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEecc
Q psy13969 157 AHDCAVRHMVWSHN---GLWMVTSDHQGYIKYWQSNM-N-NV-KTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFY 230 (877)
Q Consensus 157 ~h~~~V~~l~~spd---~~~l~sg~~dg~v~iwd~~~-~-~~-~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~ 230 (877)
.|...|++|+|+++ +++|++++.|+.|+||++.. . .+ ..+..|...|++++|++++++|++++.|++|+|||+.
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~ 116 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLS 116 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcC
Confidence 68999999999998 59999999999999999875 3 33 6788999999999999999999999999999999999
Q ss_pred CCeeeEEeccCCCCeEEEEE--cCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCC----------------------
Q psy13969 231 RCTEEKVLRGHGADVKCVDW--HPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHK---------------------- 286 (877)
Q Consensus 231 ~~~~~~~l~~h~~~v~~v~~--sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~---------------------- 286 (877)
+.+.+. +..|...|++++| ++++++|++++.|+. |++||+++.+.+..+..|.
T Consensus 117 ~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 193 (368)
T 3mmy_A 117 SNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKT--LKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLI 193 (368)
T ss_dssp TTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSE--EEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEE
T ss_pred CCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCc--EEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEE
Confidence 887666 5569999999999 889999999999998 9999999888776665432
Q ss_pred -------------------CCeeEEEEccCCCe----EEEEeCCCeEEEEEcCCCC--cceEEEecCCC-----------
Q psy13969 287 -------------------STVMDLAWNQNGNW----LVTASRDHLLKVFDIRNLS--SEVQTFRGHKK----------- 330 (877)
Q Consensus 287 -------------------~~V~~l~~sp~g~~----l~s~s~Dg~I~iwd~~~~~--~~~~~~~~h~~----------- 330 (877)
..+.++++..+... |++++.|+.|+|||++... ..+..+..|..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (368)
T 3mmy_A 194 VYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDI 273 (368)
T ss_dssp EEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEE
T ss_pred EEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccc
Confidence 23445555544444 9999999999999998743 45677777776
Q ss_pred -CeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCC
Q psy13969 331 -EASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRN 403 (877)
Q Consensus 331 -~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~ 403 (877)
.|++++|+|++. +|++++.|+.|+|||+.+.+.+..+ ..|...|++++|+|++.+|++++.|+.++.|++-
T Consensus 274 ~~v~~~~~sp~~~-~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 274 YAVNGIAFHPVHG-TLATVGSDGRFSFWDKDARTKLKTS-EQLDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp CCEEEEEECTTTC-CEEEEETTSCEEEEETTTTEEEEEC-CCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred cceEEEEEecCCC-EEEEEccCCeEEEEECCCCcEEEEe-cCCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 799999999987 7899999999999999999988887 6899999999999999999999999876666543
No 98
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=2.8e-29 Score=285.53 Aligned_cols=237 Identities=16% Similarity=0.333 Sum_probs=198.0
Q ss_pred CCEEEEEEcCCC--CEEEEEeCCCeEEEEeCCCcce----------------------------------------EE-E
Q psy13969 160 CAVRHMVWSHNG--LWMVTSDHQGYIKYWQSNMNNV----------------------------------------KT-F 196 (877)
Q Consensus 160 ~~V~~l~~spd~--~~l~sg~~dg~v~iwd~~~~~~----------------------------------------~~-~ 196 (877)
..|++|+|++++ .+|++++.|++|+||++..... .. +
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 789999999998 7999999999999999754222 12 3
Q ss_pred ccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCC-eeeE-------EeccCCCCeEEEEEcCCC-CEEEEEecCCccc
Q psy13969 197 QGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRC-TEEK-------VLRGHGADVKCVDWHPYK-SLIVSGSKDNQQP 267 (877)
Q Consensus 197 ~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~-~~~~-------~l~~h~~~v~~v~~sp~~-~~l~sgs~dg~~~ 267 (877)
..|...|++++|++++++|+++ .|++|+|||+.+. ..+. .+..|...|++++|+|++ ++|++++.|+.
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~-- 250 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT-- 250 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC--
T ss_pred cCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe--
Confidence 6799999999999999999998 7999999999843 3333 255799999999999998 99999999999
Q ss_pred EEEEcCCCCce----eEEeccCCC------------CeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCC
Q psy13969 268 VKLWDPKAGQA----LATLHAHKS------------TVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKE 331 (877)
Q Consensus 268 I~iwd~~~~~~----~~~~~~h~~------------~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~ 331 (877)
|++||+++.+. +..+..|.. .|++|+|++++++|++++. +.|+|||++.....+..+..|...
T Consensus 251 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~ 329 (447)
T 3dw8_B 251 IRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYL 329 (447)
T ss_dssp EEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGG
T ss_pred EEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccc
Confidence 99999999886 788888876 8999999999999999999 999999998756777888887642
Q ss_pred ---------------eEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEec---------------------------
Q psy13969 332 ---------------ASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIP--------------------------- 369 (877)
Q Consensus 332 ---------------v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~--------------------------- 369 (877)
+..++|+|++. +|++++.|+.|+|||+.+.+.+....
T Consensus 330 ~~~l~~~~~~~~i~~~~~~~~s~~~~-~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (447)
T 3dw8_B 330 RSKLCSLYENDCIFDKFECCWNGSDS-VVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEI 408 (447)
T ss_dssp TTTHHHHHHTSGGGCCCCEEECTTSS-EEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCE
T ss_pred cccccccccccccccceEEEECCCCC-EEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccc
Confidence 33499999988 77999999999999999887653210
Q ss_pred ----CcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeC
Q psy13969 370 ----QAHDNIIWTMAWHPLGHILATGSNDHASKFWTR 402 (877)
Q Consensus 370 ----~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~ 402 (877)
..+...|++++|+|++.+||+++.++ +++|..
T Consensus 409 ~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 409 SVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp EGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEEC
T ss_pred cccccccCCceeEEEECCCCCEEEEEecce-eeeecc
Confidence 12345789999999999999998775 777764
No 99
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-29 Score=285.29 Aligned_cols=286 Identities=13% Similarity=0.130 Sum_probs=224.2
Q ss_pred CccCCeEEEEEccCCceee-------------------ccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEccC
Q psy13969 139 KMRCPIFSMTWTPEGRRLA-------------------HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGH 199 (877)
Q Consensus 139 ~~~~~i~~~~~sp~g~~l~-------------------h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h 199 (877)
.....|.+++|||||++++ |...|.+++|+|++ .++.+.+|+.+...+..+ .|
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~~~~~-~~ 84 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLE-------FENKLDFELAQQNGLLNS-QP 84 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSCSSTT-SC
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCC-------CcceEEEEeCCCceEeec-CC
Confidence 3456788899999998884 67788899999998 566666666554443333 55
Q ss_pred CCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCC-----CeEEEEEcCCCCEEEEEecCCcccEEEEcCC
Q psy13969 200 KESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGA-----DVKCVDWHPYKSLIVSGSKDNQQPVKLWDPK 274 (877)
Q Consensus 200 ~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~-----~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~ 274 (877)
...|++++|||++.+||+++.|++|+|||... ++..+. |.. .|.+++|||++++||+++.|++ |+|||+.
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGt--VkIWd~~ 159 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGE--LQFFSIR 159 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSE--EEEEECC
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCE--EEEEECC
Confidence 88999999999999999999999999999644 666666 665 5999999999999999999999 9999999
Q ss_pred CCce-------eEEe----ccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCc--ceEEE-ecCCCCeEEEEEcCC
Q psy13969 275 AGQA-------LATL----HAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSS--EVQTF-RGHKKEASAVAWHPQ 340 (877)
Q Consensus 275 ~~~~-------~~~~----~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~--~~~~~-~~h~~~v~~i~~~p~ 340 (877)
++.. +.++ .+|...|.+|+|+|++ |++++.|++|++||+..... ...++ ..|...|.+|+|+
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-- 235 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-- 235 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--
T ss_pred CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--
Confidence 8753 5666 6677899999999998 88999999999999987332 23456 4788999999999
Q ss_pred CCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEE--cCCCCEEEEEEcCCeEEEEeCCCC-----CCCccc--
Q psy13969 341 HEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAW--HPLGHILATGSNDHASKFWTRNRL-----GDPMRD-- 411 (877)
Q Consensus 341 ~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~--sp~g~~l~sg~~dg~v~iwd~~~~-----~~~~~~-- 411 (877)
+. ++++++ +++|++||+...+..... ..|...|++|+| ++++..|+++++||+ ++|..+.. ...+..
T Consensus 236 g~-~LASa~-~~tIkLWd~~~~~~~~~~-~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d 311 (588)
T 2j04_A 236 DY-KVVLTC-PGYVHKIDLKNYSISSLK-TGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLE 311 (588)
T ss_dssp TT-EEEEEC-SSEEEEEETTTTEEEEEE-CSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHH
T ss_pred CC-EEEEEe-CCeEEEEECCCCeEEEEE-cCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcC
Confidence 44 788886 699999999987774444 379999999999 999999999999999 99987421 111000
Q ss_pred ----ccc----cCCcceeeeeeeeeeccCCCCeEEeccCCCC
Q psy13969 412 ----RYN----QKGLAHCITGVYNEEMELNDSAVIPGMGLED 445 (877)
Q Consensus 412 ----~~~----~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~ 445 (877)
.+. ..........|+++++++|+..+++++..+.
T Consensus 312 ~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~~i~~ 353 (588)
T 2j04_A 312 KKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVYDMER 353 (588)
T ss_dssp HHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEEEEEC
T ss_pred CEEEEEECCCCceeeeccceEEEEEEECCCCCEEEEEEeccC
Confidence 011 1112233556999999999999998875433
No 100
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=9.9e-29 Score=282.88 Aligned_cols=274 Identities=21% Similarity=0.370 Sum_probs=233.5
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ceEEEccCCCCeeEEEEc--CCCCEEEEEECCCcEEEEeccCCe
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NVKTFQGHKESIRGISFS--PSDSKFATCSDDGTVRVWDFYRCT 233 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~~~~~~h~~~V~~i~~s--p~~~~l~sgs~Dg~I~iwd~~~~~ 233 (877)
+|...|++++|++++ +|++++.|++|++||+... .+..+..|...|++++|+ +++.+|++++.|++|++||+.+..
T Consensus 160 ~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~ 238 (464)
T 3v7d_B 160 GHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKES 238 (464)
T ss_dssp CCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCC
T ss_pred CCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCc
Confidence 599999999999987 9999999999999998764 566788899999999998 577899999999999999998654
Q ss_pred e-----------------------eEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCee
Q psy13969 234 E-----------------------EKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVM 290 (877)
Q Consensus 234 ~-----------------------~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~ 290 (877)
. +..+..|...|.++. +++++|++++.|+. |++||+++.+.+..+..|...|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~l~~~~~d~~--i~vwd~~~~~~~~~~~~~~~~v~ 314 (464)
T 3v7d_B 239 SVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--GHGNIVVSGSYDNT--LIVWDVAQMKCLYILSGHTDRIY 314 (464)
T ss_dssp CC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--EETTEEEEEETTSC--EEEEETTTTEEEEEECCCSSCEE
T ss_pred ccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--CCCCEEEEEeCCCe--EEEEECCCCcEEEEecCCCCCEE
Confidence 2 456778888888874 56889999999999 99999999999999999999999
Q ss_pred EEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecC
Q psy13969 291 DLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ 370 (877)
Q Consensus 291 ~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 370 (877)
+++|++++++|++++.|++|++||+++ ...+..+..|...|.+++|++ .+|++++.|++|++||+.+.......
T Consensus 315 ~~~~~~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~vwd~~~~~~~~~~-- 388 (464)
T 3v7d_B 315 STIYDHERKRCISASMDTTIRIWDLEN-GELMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSY-- 388 (464)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEE--
T ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCC-CcEEEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEEEECCCCceeeee--
Confidence 999999999999999999999999988 678889999999999999984 38999999999999999988776665
Q ss_pred cCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeec
Q psy13969 371 AHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVF 450 (877)
Q Consensus 371 ~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~ 450 (877)
.|...+..++|++++.+|++++ |+.|+|||+.+.. .+.. .+..+...+.+++|+ +..++++...++.+.+|
T Consensus 389 ~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~-~~~~-----~~~~~~~~v~~v~~~--~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 389 HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGK-LVHA-----NILKDADQIWSVNFK--GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCC-EEES-----CTTTTCSEEEEEEEE--TTEEEEEEEETTEEEEE
T ss_pred cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCc-EEeh-----hhccCCCcEEEEEec--CCEEEEEEEeCCeEEEE
Confidence 4667788899999999999998 8999999997642 2211 122345668888886 56777766666665554
No 101
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5e-29 Score=276.16 Aligned_cols=257 Identities=21% Similarity=0.407 Sum_probs=217.4
Q ss_pred ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEecc--CCeeeEEeccCCCCeEEEEEcCC--CCEEEEEecCCccc
Q psy13969 192 NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFY--RCTEEKVLRGHGADVKCVDWHPY--KSLIVSGSKDNQQP 267 (877)
Q Consensus 192 ~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~--~~~~~~~l~~h~~~v~~v~~sp~--~~~l~sgs~dg~~~ 267 (877)
.+..+.+|...|++++|++++++||+++.|+.|+|||+. +.+.+..+..|...|++++|+++ +++|++++.|+.
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~-- 80 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK-- 80 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC--
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE--
Confidence 356788999999999999999999999999999999998 66677888999999999999987 899999999999
Q ss_pred EEEEcCCCCc--eeEEeccCCCCeeEEEEccC--CCeEEEEeCCCeEEEEEcCCCC-cceEEEecCCCCeEEEEEcCC--
Q psy13969 268 VKLWDPKAGQ--ALATLHAHKSTVMDLAWNQN--GNWLVTASRDHLLKVFDIRNLS-SEVQTFRGHKKEASAVAWHPQ-- 340 (877)
Q Consensus 268 I~iwd~~~~~--~~~~~~~h~~~V~~l~~sp~--g~~l~s~s~Dg~I~iwd~~~~~-~~~~~~~~h~~~v~~i~~~p~-- 340 (877)
|++||+++++ .+..+..|...|++++|+++ +.+|++++.|+.|++||++... .....+..|...|++++|+|.
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 9999999887 77788889999999999998 9999999999999999998742 345567789999999999994
Q ss_pred ----------CCcEEEEEeCCCcEEEEEcCCCce----eEEecCcCCCCEEEEEEcCC---CCEEEEEEcCCeEEEEeCC
Q psy13969 341 ----------HEGLFSSGGADGSIMFWHVGADKE----VGCIPQAHDNIIWTMAWHPL---GHILATGSNDHASKFWTRN 403 (877)
Q Consensus 341 ----------~~~~l~sgs~dg~I~iwd~~~~~~----~~~~~~~h~~~V~~v~~sp~---g~~l~sg~~dg~v~iwd~~ 403 (877)
...+|++++.|+.|+|||+++... +..+ ..|...|++++|+|+ +.+|++++.|+.|+|||+.
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL-EGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEE-CCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEE-ecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 234899999999999999987653 2334 679999999999999 8999999999999999998
Q ss_pred CCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCC
Q psy13969 404 RLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~ 454 (877)
........ .......+...+.++.|++++.+++++. .++.+++|+...
T Consensus 240 ~~~~~~~~--~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~dg~i~iw~~~~ 287 (379)
T 3jrp_A 240 NEQGPWKK--TLLKEEKFPDVLWRASWSLSGNVLALSG-GDNKVTLWKENL 287 (379)
T ss_dssp STTSCCEE--EESSSSCCSSCEEEEEECSSSCCEEEEE-SSSSEEEEEEEE
T ss_pred CCCcccee--eeeccccCCCcEEEEEEcCCCCEEEEec-CCCcEEEEeCCC
Confidence 64332211 1122233566789999999999999875 589999998763
No 102
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=5.7e-28 Score=275.16 Aligned_cols=279 Identities=23% Similarity=0.395 Sum_probs=239.6
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeee
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEE 235 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~ 235 (877)
+|...|.+++|+ +++|++++.|++|++||+... .+..+..|...|.+++|+ +++|++++.|++|++||+.+.+.+
T Consensus 157 ~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~ 232 (445)
T 2ovr_B 157 GHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCL 232 (445)
T ss_dssp CCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEE
T ss_pred CCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEE
Confidence 589999999998 569999999999999997654 567788999999999996 678999999999999999999999
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEc
Q psy13969 236 KVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDI 315 (877)
Q Consensus 236 ~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~ 315 (877)
..+..|...|.+++| ++++|++++.|+. |++||+++.+.+..+..|...|.+++| ++.+|++++.|+.|++||+
T Consensus 233 ~~~~~~~~~v~~~~~--~~~~l~~~~~dg~--i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~ 306 (445)
T 2ovr_B 233 HVLMGHVAAVRCVQY--DGRRVVSGAYDFM--VKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDV 306 (445)
T ss_dssp EEEECCSSCEEEEEE--CSSCEEEEETTSC--EEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEET
T ss_pred EEEcCCcccEEEEEE--CCCEEEEEcCCCE--EEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEEC
Confidence 999999999999999 6889999999999 999999999999999999999999999 7889999999999999999
Q ss_pred CCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecC--cCCCCEEEEEEcCCCCEEEEEEc
Q psy13969 316 RNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ--AHDNIIWTMAWHPLGHILATGSN 393 (877)
Q Consensus 316 ~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~--~h~~~V~~v~~sp~g~~l~sg~~ 393 (877)
++ ...+..+..|...+.+++++. . +|++++.|+.|++||+++.+.+..+.. .|...|++++|+ +.+|++++.
T Consensus 307 ~~-~~~~~~~~~~~~~v~~~~~~~--~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~ 380 (445)
T 2ovr_B 307 ET-GNCIHTLTGHQSLTSGMELKD--N-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSD 380 (445)
T ss_dssp TT-CCEEEEECCCCSCEEEEEEET--T-EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEET
T ss_pred CC-CCEEEEEcCCcccEEEEEEeC--C-EEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeC
Confidence 98 577888999999999999864 3 899999999999999999998888732 388899999996 579999999
Q ss_pred CCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCe----eeecCCCC
Q psy13969 394 DHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDE----DSVFPSSE 454 (877)
Q Consensus 394 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~----~~~~~~~~ 454 (877)
|+.|+|||+.... .+.... ......+...+.+++|++++..++++. .|+. +.+|+...
T Consensus 381 dg~v~iwd~~~~~-~~~~~~-~~~~~~~~~~v~~~~~s~~~~~la~~~-~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 381 DGTVKLWDLKTGE-FIRNLV-TLESGGSGGVVWRIRASNTKLVCAVGS-RNGTEETKLLVLDFDV 442 (445)
T ss_dssp TSEEEEEETTTCC-EEEEEE-ECTTGGGTCEEEEEEECSSEEEEEEEC-SSSSSCCEEEEEECCC
T ss_pred CCeEEEEECCCCc-eeeeee-ccccCCCCceEEEEEecCCEEEEEEcc-cCCCCccEEEEEECCC
Confidence 9999999997642 222111 111134556799999999988888875 4444 88887654
No 103
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=9.3e-28 Score=259.36 Aligned_cols=241 Identities=17% Similarity=0.412 Sum_probs=206.5
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCC-ee
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRC-TE 234 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~-~~ 234 (877)
.|...|++|+|++++++||+++.|++|+||++++. .+..+..|...+.++.+. +.+|++++.++.+++|+.... ..
T Consensus 65 ~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~--~~~l~s~~~~~~~~~~~~~~~~~~ 142 (318)
T 4ggc_A 65 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHH 142 (318)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCE
T ss_pred CCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecC--CCEEEEEecCCceEeeecCCCcee
Confidence 47788999999999999999999999999998764 467888999988877664 679999999999999998765 45
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCc----eeEEeccCCCCeeEEEEccCCCeE---EEEeCC
Q psy13969 235 EKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQ----ALATLHAHKSTVMDLAWNQNGNWL---VTASRD 307 (877)
Q Consensus 235 ~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~----~~~~~~~h~~~V~~l~~sp~g~~l---~s~s~D 307 (877)
+..+..|...+.+++|++++++|++++.|+. |++||+++++ .+.....|...|.++++++++..+ ++++.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~--i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 220 (318)
T 4ggc_A 143 VATLSGHSQEVCGLRWAPDGRHLASGGNDNL--VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 220 (318)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSC--EEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT
T ss_pred EEEEcCccCceEEEEEcCCCCEEEEEecCcc--eeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC
Confidence 5678889999999999999999999999999 9999998765 345566788899999999966543 355678
Q ss_pred CeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEE-EeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCC
Q psy13969 308 HLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSS-GGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGH 386 (877)
Q Consensus 308 g~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~s-gs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~ 386 (877)
++|+|||.+.. .......+...+..++|++++..++++ ++.|+.|+|||+.+.+.+..+ ..|...|++|+|+|+++
T Consensus 221 ~~i~lwd~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l-~gH~~~V~~l~~spdg~ 297 (318)
T 4ggc_A 221 RHIRIWNVCSG--ACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL-KGHTSRVLSLTMSPDGA 297 (318)
T ss_dssp CEEEEEETTTC--CEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSS
T ss_pred CEEEEEecccc--cccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEE-cCCCCCEEEEEEcCCCC
Confidence 99999999873 334445577889999999999855543 347999999999999999988 78999999999999999
Q ss_pred EEEEEEcCCeEEEEeCCC
Q psy13969 387 ILATGSNDHASKFWTRNR 404 (877)
Q Consensus 387 ~l~sg~~dg~v~iwd~~~ 404 (877)
+|||++.|++|+|||+..
T Consensus 298 ~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 298 TVASAAADETLRLWRCFE 315 (318)
T ss_dssp CEEEEETTTEEEEECCSC
T ss_pred EEEEEecCCeEEEEECCC
Confidence 999999999999999864
No 104
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.3e-29 Score=305.74 Aligned_cols=241 Identities=12% Similarity=0.174 Sum_probs=203.1
Q ss_pred ceeeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCe
Q psy13969 154 RRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCT 233 (877)
Q Consensus 154 ~~l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~ 233 (877)
.++.|...|++|+|+|++++||+++.|++|+||+...........|...|++|+|++ +++|++++.|++|+|||+.+.+
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc
Confidence 345799999999999999999999999999999988776666667889999999999 8899999999999999999988
Q ss_pred eeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCcee-----------EEeccCCCCeeEEEEccC-CCeE
Q psy13969 234 EEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQAL-----------ATLHAHKSTVMDLAWNQN-GNWL 301 (877)
Q Consensus 234 ~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~-----------~~~~~h~~~V~~l~~sp~-g~~l 301 (877)
.+..+. |...|++++|+|++++|++++.|+. |++||+++.+.. ..+..|...|++|+|+|+ ..+|
T Consensus 91 ~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~--V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 91 VLTTVF-VPGKITSIDTDASLDWMLIGLQNGS--MIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp EEEEEE-CSSCEEEEECCTTCSEEEEEETTSC--EEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCc--EEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 888886 7789999999999999999999999 999999987753 223568899999999995 5789
Q ss_pred EEEeCCCeEEEEEcCCCCcceEEEecC------------------CCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCc
Q psy13969 302 VTASRDHLLKVFDIRNLSSEVQTFRGH------------------KKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADK 363 (877)
Q Consensus 302 ~s~s~Dg~I~iwd~~~~~~~~~~~~~h------------------~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~ 363 (877)
++++.|++| |||+++ ...+..+..| ...|++++|+|++. +|++++.|++|+|||+++++
T Consensus 168 ~~g~~dg~v-lWd~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 168 LISYEYVTL-TYSLVE-NEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp EEECSSCEE-EEETTT-TEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEETTCCEEEEETTTCC
T ss_pred EEEeCCCcE-EEECCC-CceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCCCc
Confidence 999999999 999998 5666677655 57799999999987 89999999999999999988
Q ss_pred eeEE--ec--C-------------cCCCCEEEEEEc----CCC-CEEEEEEcCC-----eEEEEe
Q psy13969 364 EVGC--IP--Q-------------AHDNIIWTMAWH----PLG-HILATGSNDH-----ASKFWT 401 (877)
Q Consensus 364 ~~~~--~~--~-------------~h~~~V~~v~~s----p~g-~~l~sg~~dg-----~v~iwd 401 (877)
++.. +. . .|...|++++|+ |++ .+|++++.|. .|.+|+
T Consensus 245 ~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~ 309 (902)
T 2oaj_A 245 MIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMID 309 (902)
T ss_dssp EEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEE
T ss_pred EEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEe
Confidence 7653 21 1 134579999995 443 4667775552 566666
No 105
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.4e-29 Score=282.56 Aligned_cols=266 Identities=14% Similarity=0.145 Sum_probs=214.5
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcc----eEEEc-------------------------------------
Q psy13969 159 DCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNN----VKTFQ------------------------------------- 197 (877)
Q Consensus 159 ~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~----~~~~~------------------------------------- 197 (877)
..+|.+++|++|+++|+++ .++.|++||+.+.. +..+.
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4568899999999966665 57899999965544 33333
Q ss_pred -----------------cCCCCeeEEEEcCCCCEE-EEEECCCcEEEEecc--CCeeeEEec--cCCCCeEEEEEcCCCC
Q psy13969 198 -----------------GHKESIRGISFSPSDSKF-ATCSDDGTVRVWDFY--RCTEEKVLR--GHGADVKCVDWHPYKS 255 (877)
Q Consensus 198 -----------------~h~~~V~~i~~sp~~~~l-~sgs~Dg~I~iwd~~--~~~~~~~l~--~h~~~v~~v~~sp~~~ 255 (877)
.|...|++++|++++++| ++++.|++|+|||+. +++.+..+. .|...|++++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 234479999999999996 888899999999998 777777776 5678999999999999
Q ss_pred EEEEEecCCcccEEEEcCCCCceeE----EeccCCCCeeEEEEccC---CCeEEEEeCCCeEEEEEcCCCCcceEE-Eec
Q psy13969 256 LIVSGSKDNQQPVKLWDPKAGQALA----TLHAHKSTVMDLAWNQN---GNWLVTASRDHLLKVFDIRNLSSEVQT-FRG 327 (877)
Q Consensus 256 ~l~sgs~dg~~~I~iwd~~~~~~~~----~~~~h~~~V~~l~~sp~---g~~l~s~s~Dg~I~iwd~~~~~~~~~~-~~~ 327 (877)
+|++++.++. |++||+.+.+... .+..|...|++|+|+|+ +++|++++.|++|+|||+++ ...+.. +..
T Consensus 163 ~l~~~~~~g~--v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~-~~~~~~~~~~ 239 (450)
T 2vdu_B 163 TVIIADKFGD--VYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ-CFIVDKWLFG 239 (450)
T ss_dssp EEEEEETTSE--EEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC-TTCEEEECCC
T ss_pred EEEEEeCCCc--EEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC-CceeeeeecC
Confidence 9999999998 9999998776544 77789999999999999 99999999999999999987 445555 668
Q ss_pred CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecC------------------------cCCCCEEEEEEcC
Q psy13969 328 HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ------------------------AHDNIIWTMAWHP 383 (877)
Q Consensus 328 h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~------------------------~h~~~V~~v~~sp 383 (877)
|...|++++|+ ++. +|++++.|++|+|||+.+++.+..+.. .+...|.+++|++
T Consensus 240 h~~~v~~~~~s-d~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 240 HKHFVSSICCG-KDY-LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp CSSCEEEEEEC-STT-EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred CCCceEEEEEC-CCC-EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 99999999999 776 889999999999999999988776631 2345799999999
Q ss_pred CCCEEEEEE-cCCeEEEEeC-CCCCCCcccccccCCcceeeeeeeeeeccCCC
Q psy13969 384 LGHILATGS-NDHASKFWTR-NRLGDPMRDRYNQKGLAHCITGVYNEEMELND 434 (877)
Q Consensus 384 ~g~~l~sg~-~dg~v~iwd~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~ 434 (877)
++++|++++ .|+.|+||++ +.....+.. ...+..+ ..+.+++|+++.
T Consensus 318 ~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~---~~~~~~~-~~v~~~~~~~~~ 366 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILEMSEKQKGDLAL---KQIITFP-YNVISLSAHNDE 366 (450)
T ss_dssp SSSEEEEEETTCSEEEEEEECSSSTTCEEE---EEEEECS-SCEEEEEEETTE
T ss_pred CCCEEEEEECCCCeEEEEEeccCCCCceee---ccEeccC-CceEEEEecCCc
Confidence 999999999 8999999999 221211111 1112222 557888998853
No 106
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=5e-29 Score=282.64 Aligned_cols=259 Identities=21% Similarity=0.404 Sum_probs=215.9
Q ss_pred EEEccCCCCeeEEEEcCC-CCEEEEEECCCcEEEEeccC----------CeeeEEeccCCCCeEEEEEcCCCC-EEEEEe
Q psy13969 194 KTFQGHKESIRGISFSPS-DSKFATCSDDGTVRVWDFYR----------CTEEKVLRGHGADVKCVDWHPYKS-LIVSGS 261 (877)
Q Consensus 194 ~~~~~h~~~V~~i~~sp~-~~~l~sgs~Dg~I~iwd~~~----------~~~~~~l~~h~~~v~~v~~sp~~~-~l~sgs 261 (877)
..+..|...|++|+|+++ +.+||+++.|+.|+|||+.+ ...+..+..|...|++|+|++++. +|++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 456689999999999997 67999999999999999986 577888899999999999999988 999999
Q ss_pred cCCcccEEEEcCCCCce-------eEEeccCCCCeeEEEEcc-CCCeEEEEeCCCeEEEEEcCCCC--cceEEEecCCCC
Q psy13969 262 KDNQQPVKLWDPKAGQA-------LATLHAHKSTVMDLAWNQ-NGNWLVTASRDHLLKVFDIRNLS--SEVQTFRGHKKE 331 (877)
Q Consensus 262 ~dg~~~I~iwd~~~~~~-------~~~~~~h~~~V~~l~~sp-~g~~l~s~s~Dg~I~iwd~~~~~--~~~~~~~~h~~~ 331 (877)
.|+. |++||+.+... ...+..|...|.+|+|++ +..+|++++.|+.|+|||++... ..+..+..|...
T Consensus 202 ~dg~--i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 279 (430)
T 2xyi_A 202 DDHT--ICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE 279 (430)
T ss_dssp TTSC--EEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC
T ss_pred CCCe--EEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC
Confidence 9999 99999987321 456778999999999999 77899999999999999999742 567788899999
Q ss_pred eEEEEEcCCCCcEEEEEeCCCcEEEEEcCCC-ceeEEecCcCCCCEEEEEEcCCC-CEEEEEEcCCeEEEEeCCCCCCCc
Q psy13969 332 ASAVAWHPQHEGLFSSGGADGSIMFWHVGAD-KEVGCIPQAHDNIIWTMAWHPLG-HILATGSNDHASKFWTRNRLGDPM 409 (877)
Q Consensus 332 v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~-~~~~~~~~~h~~~V~~v~~sp~g-~~l~sg~~dg~v~iwd~~~~~~~~ 409 (877)
|++|+|+|++..+|++++.|+.|+|||+++. ..+..+ ..|...|++++|+|++ .+|++++.|+.|+|||+.......
T Consensus 280 v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~-~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~ 358 (430)
T 2xyi_A 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ 358 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE-ECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCC
T ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe-ecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcccc
Confidence 9999999999889999999999999999984 455555 6799999999999998 579999999999999998643221
Q ss_pred cc-------ccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCCc
Q psy13969 410 RD-------RYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSEP 455 (877)
Q Consensus 410 ~~-------~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~~ 455 (877)
.. ......+..+...+.++.|++++..++++.+.++.+++|...+.
T Consensus 359 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 359 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 10 01111223455669999999999844444568999999987654
No 107
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=1.1e-27 Score=272.69 Aligned_cols=276 Identities=23% Similarity=0.410 Sum_probs=234.7
Q ss_pred eeccCCE-EEEEEcCCCCEEEEEeCCCeEEEEeCCC-cceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCe
Q psy13969 156 LAHDCAV-RHMVWSHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCT 233 (877)
Q Consensus 156 l~h~~~V-~~l~~spd~~~l~sg~~dg~v~iwd~~~-~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~ 233 (877)
.+|...| +|+. +++++|++++.|++|++||+.+ ..+..+..|...|++++|+ +++|++++.|++|++||+.+++
T Consensus 115 ~~h~~~v~~~~~--~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~ 190 (445)
T 2ovr_B 115 KGHDDHVITCLQ--FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGE 190 (445)
T ss_dssp ECSTTSCEEEEE--EETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTE
T ss_pred cccCCCcEEEEE--EcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCc
Confidence 3677764 5544 4689999999999999999765 4567888999999999997 6799999999999999999999
Q ss_pred eeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEE
Q psy13969 234 EEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVF 313 (877)
Q Consensus 234 ~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iw 313 (877)
.+..+..|...|.+++|+ +++|++++.|+. |++||+++++.+..+..|...|.+++| ++.+|++++.|+.|++|
T Consensus 191 ~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~--i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iw 264 (445)
T 2ovr_B 191 CIHTLYGHTSTVRCMHLH--EKRVVSGSRDAT--LRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVW 264 (445)
T ss_dssp EEEEECCCSSCEEEEEEE--TTEEEEEETTSE--EEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEE
T ss_pred EEEEECCCCCcEEEEEec--CCEEEEEeCCCE--EEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEE
Confidence 999999999999999996 578999999998 999999999999999999999999999 68899999999999999
Q ss_pred EcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEc
Q psy13969 314 DIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSN 393 (877)
Q Consensus 314 d~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~ 393 (877)
|+++ ...+..+..|...|.+++| ++. +|++++.|+.|++||+++.+.+..+ ..|...|.+++++ +.+|++++.
T Consensus 265 d~~~-~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~--~~~l~~~~~ 337 (445)
T 2ovr_B 265 DPET-ETCLHTLQGHTNRVYSLQF--DGI-HVVSGSLDTSIRVWDVETGNCIHTL-TGHQSLTSGMELK--DNILVSGNA 337 (445)
T ss_dssp EGGG-TEEEEEECCCSSCEEEEEE--CSS-EEEEEETTSCEEEEETTTCCEEEEE-CCCCSCEEEEEEE--TTEEEEEET
T ss_pred ECCC-CcEeEEecCCCCceEEEEE--CCC-EEEEEeCCCeEEEEECCCCCEEEEE-cCCcccEEEEEEe--CCEEEEEeC
Confidence 9988 5778889999999999999 444 8899999999999999999988887 6889999999885 569999999
Q ss_pred CCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCCc
Q psy13969 394 DHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSEP 455 (877)
Q Consensus 394 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~~ 455 (877)
|+.|++||+.... .+.. ......+...+.++.|+ ..+++++ +.|+.+++|+..+.
T Consensus 338 dg~i~vwd~~~~~-~~~~---~~~~~~~~~~v~~~~~~--~~~l~s~-~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 338 DSTVKIWDIKTGQ-CLQT---LQGPNKHQSAVTCLQFN--KNFVITS-SDDGTVKLWDLKTG 392 (445)
T ss_dssp TSCEEEEETTTCC-EEEE---ECSTTSCSSCEEEEEEC--SSEEEEE-ETTSEEEEEETTTC
T ss_pred CCeEEEEECCCCc-EEEE---EccCCCCCCCEEEEEEC--CCEEEEE-eCCCeEEEEECCCC
Confidence 9999999997532 2111 11112245567788885 5677776 47899999987643
No 108
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=9.2e-29 Score=276.84 Aligned_cols=257 Identities=11% Similarity=0.178 Sum_probs=188.6
Q ss_pred cCCeEEEEEccCCcee--eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcce------EEEccCCCCeeEEEEcC--
Q psy13969 141 RCPIFSMTWTPEGRRL--AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNV------KTFQGHKESIRGISFSP-- 210 (877)
Q Consensus 141 ~~~i~~~~~sp~g~~l--~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~------~~~~~h~~~V~~i~~sp-- 210 (877)
...+..+.|++..... .|...+....+++++.+|++++.|++|+|||++.... ..+.+|.+.|++|+|+|
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~ 148 (393)
T 4gq1_A 69 GLPTLHLSFSSSCSYSENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVY 148 (393)
T ss_dssp SSCEEEEEECTTCEEECC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEE
T ss_pred CCCeeeEeecCCccccccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEcccc
Confidence 3457788888765333 4566666667777889999999999999999776543 23578999999999987
Q ss_pred ------CCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCC-CEEEEEecCCcccEEEEcCCCCceeEE--
Q psy13969 211 ------SDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYK-SLIVSGSKDNQQPVKLWDPKAGQALAT-- 281 (877)
Q Consensus 211 ------~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~-~~l~sgs~dg~~~I~iwd~~~~~~~~~-- 281 (877)
|+++||+++.|++|+|||+.+...+..+..|...|.+++|+|++ .+|++++.|+. |++||+++++....
T Consensus 149 ~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~--v~~wd~~t~~~~~~~~ 226 (393)
T 4gq1_A 149 SADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGN--IRIFDWTLNLSAEENS 226 (393)
T ss_dssp CTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSE--EEEEETTCCC------
T ss_pred ccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCE--EEEEECCCCccccccc
Confidence 78899999999999999999888888888899999999999987 48999999998 99999987654322
Q ss_pred -----------------------eccCCCCeeEEEEc-cCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEE--
Q psy13969 282 -----------------------LHAHKSTVMDLAWN-QNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAV-- 335 (877)
Q Consensus 282 -----------------------~~~h~~~V~~l~~s-p~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i-- 335 (877)
...|...|.++.|+ +++++|++++.|++|+|||+.. ......+..|...+..+
T Consensus 227 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~-~~~~~~l~~~~~~~~~~~~ 305 (393)
T 4gq1_A 227 QTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFA-NNDYNEISDSTMKLGPKNL 305 (393)
T ss_dssp ----CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CC
T ss_pred ccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECcc-CCCCceEeeecCccccEEE
Confidence 23577889999987 6999999999999999999976 33334444443333322
Q ss_pred ----------------EEcC-CCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEE
Q psy13969 336 ----------------AWHP-QHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASK 398 (877)
Q Consensus 336 ----------------~~~p-~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~ 398 (877)
.|++ ....++++++.|++|+|||+.+++.+..+ ..|...|++|+||||+++||+++.++ |.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~-~~~~~~V~svafspdG~~LA~as~~G-v~ 383 (393)
T 4gq1_A 306 LPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIP-IQLGMPIVDFCWHQDGSHLAIATEGS-VL 383 (393)
T ss_dssp SCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEE-EECSSCEEEEEECTTSSEEEEEESSE-EE
T ss_pred ccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEe-cCCCCcEEEEEEcCCCCEEEEEeCCC-eE
Confidence 3333 34446778889999999999998887776 57888999999999999999998766 55
Q ss_pred EEeC
Q psy13969 399 FWTR 402 (877)
Q Consensus 399 iwd~ 402 (877)
+|++
T Consensus 384 lvrL 387 (393)
T 4gq1_A 384 LTRL 387 (393)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 109
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=3.7e-28 Score=264.99 Aligned_cols=256 Identities=18% Similarity=0.364 Sum_probs=210.8
Q ss_pred EEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCC----eeeEEeccCCCCeEEEEEcC--CCCEEEEEecCCccc
Q psy13969 194 KTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRC----TEEKVLRGHGADVKCVDWHP--YKSLIVSGSKDNQQP 267 (877)
Q Consensus 194 ~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~----~~~~~l~~h~~~v~~v~~sp--~~~~l~sgs~dg~~~ 267 (877)
..+.+|...|++|+|++++++||+++.|++|+|||+.+. +....+..|...|++++|++ ++++|++++.|+.
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~-- 82 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT-- 82 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC--
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe--
Confidence 456799999999999999999999999999999999876 46677788999999999999 5899999999999
Q ss_pred EEEEcCCCC---------ceeEEeccCCCCeeEEEEccC--CCeEEEEeCCCeEEEEEcCCCCcceEEE-----------
Q psy13969 268 VKLWDPKAG---------QALATLHAHKSTVMDLAWNQN--GNWLVTASRDHLLKVFDIRNLSSEVQTF----------- 325 (877)
Q Consensus 268 I~iwd~~~~---------~~~~~~~~h~~~V~~l~~sp~--g~~l~s~s~Dg~I~iwd~~~~~~~~~~~----------- 325 (877)
|++||+++. +.+..+..|...|.+++|+++ +.+|++++.|+.|+|||+++.. .+..+
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~~ 161 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS-DLRSWTLTSEMKVLSI 161 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT-CTTCCEEEEEEESCSC
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH-Hhcccccccccccccc
Confidence 999999876 557788899999999999999 9999999999999999998743 22221
Q ss_pred --ecCCCCeEEEEEcCC--CCcEEEEEeCCCcEEEEEcCCCce--eEEecCcCCCCEEEEEEcCCC----CEEEEEEcCC
Q psy13969 326 --RGHKKEASAVAWHPQ--HEGLFSSGGADGSIMFWHVGADKE--VGCIPQAHDNIIWTMAWHPLG----HILATGSNDH 395 (877)
Q Consensus 326 --~~h~~~v~~i~~~p~--~~~~l~sgs~dg~I~iwd~~~~~~--~~~~~~~h~~~V~~v~~sp~g----~~l~sg~~dg 395 (877)
..|...+.+++|+|+ ...+|++++.|+.+.+|+...... +..+ ..|...|++++|+|++ ++|++++.|+
T Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 162 PPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKL-PGHKSLIRSISWAPSIGRWYQLIATGCKDG 240 (351)
T ss_dssp CCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEEC-CCCCSCEEEEEECCCSSCSSEEEEEEETTS
T ss_pred ccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeec-CCCCcceeEEEECCCCCCcceEEEEEcCCC
Confidence 257889999999997 334899999999998888877664 3344 6799999999999998 8999999999
Q ss_pred eEEEEeCCCCCCCccc---------------------------------------ccccCCcceeeeeeeeeeccCCCCe
Q psy13969 396 ASKFWTRNRLGDPMRD---------------------------------------RYNQKGLAHCITGVYNEEMELNDSA 436 (877)
Q Consensus 396 ~v~iwd~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~v~~~~~~~d~~~ 436 (877)
.|++||+......... ......+..|...|.++.|++++.+
T Consensus 241 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 320 (351)
T 3f3f_A 241 RIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTI 320 (351)
T ss_dssp CEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCC
T ss_pred eEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCE
Confidence 9999999753211100 0111222345567999999999998
Q ss_pred EEeccCCCCeeeecCCCC
Q psy13969 437 VIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 437 l~~~~g~d~~~~~~~~~~ 454 (877)
|+++. .|+.+++|+...
T Consensus 321 l~s~~-~dg~v~iw~~~~ 337 (351)
T 3f3f_A 321 LSSAG-DDGKVRLWKATY 337 (351)
T ss_dssp EEEEE-TTSCEEEEEECT
T ss_pred EEEec-CCCcEEEEecCc
Confidence 88875 789999998764
No 110
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.4e-27 Score=263.26 Aligned_cols=283 Identities=11% Similarity=0.063 Sum_probs=214.0
Q ss_pred eeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEE-EEEECCCcEEEEeccCCee
Q psy13969 156 LAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKF-ATCSDDGTVRVWDFYRCTE 234 (877)
Q Consensus 156 l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l-~sgs~Dg~I~iwd~~~~~~ 234 (877)
-.|...|++++|++|+++|++++.++ ++||+++.........+ ..+..++|+++.+++ ++++.|++|+|||+.+++.
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~ 93 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM-RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQD 93 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC-SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec-CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcE
Confidence 35889999999999999999998775 78999776544333222 358889999888877 5567789999999999999
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCC-ceeEEeccCCCCeeEEEEccCCCeEEE--EeCCCeEE
Q psy13969 235 EKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG-QALATLHAHKSTVMDLAWNQNGNWLVT--ASRDHLLK 311 (877)
Q Consensus 235 ~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~-~~~~~~~~h~~~V~~l~~sp~g~~l~s--~s~Dg~I~ 311 (877)
+..+. |...|.+++|+++ .++++ .|+. |++||+.+. +.+..+.. ....+++++ .++++ ++.|+.|+
T Consensus 94 ~~~~~-~~~~v~~v~~~~~--~~~~~-~~~~--i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~ 162 (355)
T 3vu4_A 94 VSRIK-VDAPVKDLFLSRE--FIVVS-YGDV--ISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIH 162 (355)
T ss_dssp EEEEE-CSSCEEEEEECSS--EEEEE-ETTE--EEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEE
T ss_pred EEEEE-CCCceEEEEEcCC--EEEEE-EcCE--EEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEE
Confidence 88887 6779999999875 34444 4666 999999987 66655544 445566666 66666 47899999
Q ss_pred EEEcCCCC--------------cc-eEEEecCCCCeEEEEEcCCCCcEEEEEeCCCc-EEEEEcCCCceeEEecCc-CCC
Q psy13969 312 VFDIRNLS--------------SE-VQTFRGHKKEASAVAWHPQHEGLFSSGGADGS-IMFWHVGADKEVGCIPQA-HDN 374 (877)
Q Consensus 312 iwd~~~~~--------------~~-~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~-I~iwd~~~~~~~~~~~~~-h~~ 374 (877)
|||+++.. .+ +..+..|...|++++|+|++. +|++++.|++ |+|||+++++++..+... |..
T Consensus 163 iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~-~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~ 241 (355)
T 3vu4_A 163 ITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD-MVATCSQDGTIIRVFKTEDGVLVREFRRGLDRA 241 (355)
T ss_dssp EEECCC------------------CCEEECCCSSCEEEEEECTTSS-EEEEEETTCSEEEEEETTTCCEEEEEECTTCCS
T ss_pred EEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC-EEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCC
Confidence 99998732 12 788899999999999999987 8999999998 999999999999888534 999
Q ss_pred CEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCccccccc--------CC-------cc-eeeeeeeeeeccCCCCeEE
Q psy13969 375 IIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQ--------KG-------LA-HCITGVYNEEMELNDSAVI 438 (877)
Q Consensus 375 ~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~--------~~-------~~-~~~~~v~~~~~~~d~~~l~ 438 (877)
.|++++|+|++++|++++.|++|+|||+............. .. +. ........++|+.++..++
T Consensus 242 ~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~ 321 (355)
T 3vu4_A 242 DVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVV 321 (355)
T ss_dssp CEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEE
T ss_pred cEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEE
Confidence 99999999999999999999999999997643211110000 00 00 0001124577888888888
Q ss_pred eccCCCCeeeecCCC
Q psy13969 439 PGMGLEDEDSVFPSS 453 (877)
Q Consensus 439 ~~~g~d~~~~~~~~~ 453 (877)
++. .++.+++|...
T Consensus 322 ~~~-~dg~~~~~~~~ 335 (355)
T 3vu4_A 322 VWP-HTRMIETFKVV 335 (355)
T ss_dssp EET-TTTEEEEEEEE
T ss_pred EEe-CCCeEEEEEEE
Confidence 875 57888888654
No 111
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=4.4e-28 Score=271.44 Aligned_cols=271 Identities=17% Similarity=0.275 Sum_probs=222.6
Q ss_pred CCeEEEEeCCC-cceEEEccCCCCeeEEEEcC-CCCEEEEEECCCcEEEEeccCCeeeEEec-------------cCCCC
Q psy13969 180 QGYIKYWQSNM-NNVKTFQGHKESIRGISFSP-SDSKFATCSDDGTVRVWDFYRCTEEKVLR-------------GHGAD 244 (877)
Q Consensus 180 dg~v~iwd~~~-~~~~~~~~h~~~V~~i~~sp-~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~-------------~h~~~ 244 (877)
+..+++|+.+. .....+..|...|++|+|+| ++++||+++.|++|+|||+.+......+. .|...
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS 101 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC
T ss_pred cCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCc
Confidence 34566777554 34567778999999999999 99999999999999999998776554443 59999
Q ss_pred eEEEEEcC-CCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccC---CCeEEEEeCCCeEEEEEcCCCCc
Q psy13969 245 VKCVDWHP-YKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQN---GNWLVTASRDHLLKVFDIRNLSS 320 (877)
Q Consensus 245 v~~v~~sp-~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~---g~~l~s~s~Dg~I~iwd~~~~~~ 320 (877)
|.+++|++ ++.+|++++.|+. |++||+.+.+.+..+. +...+.+++|++. +.+|++++.|+.|++||+++ ..
T Consensus 102 v~~~~~~~~~~~~l~s~~~d~~--i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~-~~ 177 (408)
T 4a11_B 102 VETVQWYPHDTGMFTSSSFDKT--LKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS-GS 177 (408)
T ss_dssp EEEEEECTTCTTCEEEEETTSE--EEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS-SC
T ss_pred EEEEEEccCCCcEEEEEeCCCe--EEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC-cc
Confidence 99999999 7789999999998 9999999998887775 7888999999984 45999999999999999997 57
Q ss_pred ceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCcee-EEe--------------cCcCCCCEEEEEEcCCC
Q psy13969 321 EVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEV-GCI--------------PQAHDNIIWTMAWHPLG 385 (877)
Q Consensus 321 ~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~-~~~--------------~~~h~~~V~~v~~sp~g 385 (877)
.+..+..|...|++++|+|++..+|++++.|+.|++||+++.... ..+ ...|...|++++|++++
T Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 257 (408)
T 4a11_B 178 CSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDG 257 (408)
T ss_dssp CCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTS
T ss_pred eeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCC
Confidence 788899999999999999999988999999999999999876522 222 14688899999999999
Q ss_pred CEEEEEEcCCeEEEEeCCCCCCCcccc----------------------------------------cccCCcceeeeee
Q psy13969 386 HILATGSNDHASKFWTRNRLGDPMRDR----------------------------------------YNQKGLAHCITGV 425 (877)
Q Consensus 386 ~~l~sg~~dg~v~iwd~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~v 425 (877)
.+|++++.|+.|++||+.......... .....+..+...|
T Consensus 258 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v 337 (408)
T 4a11_B 258 LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTV 337 (408)
T ss_dssp SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCE
T ss_pred CEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeE
Confidence 999999999999999998643221100 0111123455678
Q ss_pred eeeeccCCCCeEEeccCCCCeeeecCCCCc
Q psy13969 426 YNEEMELNDSAVIPGMGLEDEDSVFPSSEP 455 (877)
Q Consensus 426 ~~~~~~~d~~~l~~~~g~d~~~~~~~~~~~ 455 (877)
.+++|++++.+|+++. .|+.+++|+....
T Consensus 338 ~~~~~s~~~~~l~s~~-~dg~i~iw~~~~~ 366 (408)
T 4a11_B 338 DCCVFQSNFQELYSGS-RDCNILAWVPSLY 366 (408)
T ss_dssp EEEEEETTTTEEEEEE-TTSCEEEEEECC-
T ss_pred EEEEEcCCCCEEEEEC-CCCeEEEEeCCCC
Confidence 9999999999998874 7899999987653
No 112
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=1.5e-27 Score=270.85 Aligned_cols=232 Identities=24% Similarity=0.460 Sum_probs=205.7
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-cceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeee
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEE 235 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~-~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~ 235 (877)
.|...|++++| ++++|++++.|++|++||+.+ ..+..+..|...|.+++|+ +.+|++++.|++|++||+.+....
T Consensus 171 ~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~ 246 (435)
T 1p22_A 171 GHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDI 246 (435)
T ss_dssp CCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCC
T ss_pred CCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCc
Confidence 58999999999 788999999999999999765 4567888999999999997 469999999999999999877655
Q ss_pred ---EEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEE
Q psy13969 236 ---KVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKV 312 (877)
Q Consensus 236 ---~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~i 312 (877)
..+..|...|.+++| ++++|++++.|+. |++||+++++.+..+..|...|.+++|+ +.+|++++.|++|++
T Consensus 247 ~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~--i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~i 320 (435)
T 1p22_A 247 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRT--IKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRL 320 (435)
T ss_dssp EEEEEECCCSSCEEEEEE--ETTEEEEEETTSE--EEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEE
T ss_pred eeeeEecCCCCcEEEEEe--CCCEEEEEeCCCe--EEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEE
Confidence 677889999999999 6889999999998 9999999999999999999999999994 679999999999999
Q ss_pred EEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCc---------eeEEecCcCCCCEEEEEEcC
Q psy13969 313 FDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADK---------EVGCIPQAHDNIIWTMAWHP 383 (877)
Q Consensus 313 wd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~---------~~~~~~~~h~~~V~~v~~sp 383 (877)
||+++ ...+..+..|...|.+++| ++. +|++++.|+.|+|||+.+.. .+..+ ..|...|++++|
T Consensus 321 wd~~~-~~~~~~~~~h~~~v~~~~~--~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~-- 393 (435)
T 1p22_A 321 WDIEC-GACLRVLEGHEELVRCIRF--DNK-RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL-VEHSGRVFRLQF-- 393 (435)
T ss_dssp EETTT-CCEEEEECCCSSCEEEEEC--CSS-EEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEE-CCCSSCCCCEEE--
T ss_pred EECCC-CCEEEEEeCCcCcEEEEEe--cCC-EEEEEeCCCcEEEEECCCCCCccccccchheeec-cCCCCCeEEEEe--
Confidence 99998 6788899999999999999 444 89999999999999997655 56666 789999999999
Q ss_pred CCCEEEEEEcCCeEEEEeCCCC
Q psy13969 384 LGHILATGSNDHASKFWTRNRL 405 (877)
Q Consensus 384 ~g~~l~sg~~dg~v~iwd~~~~ 405 (877)
++.+|++++.|++|+|||+...
T Consensus 394 ~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 394 DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp CSSCEEECCSSSEEEEEC----
T ss_pred CCCEEEEEeCCCEEEEEECCCC
Confidence 6788999999999999999764
No 113
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.9e-29 Score=278.57 Aligned_cols=261 Identities=13% Similarity=0.101 Sum_probs=204.4
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEE
Q psy13969 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKV 237 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~ 237 (877)
....|.+|+||||++++|+++.|++|+ |... ...+.+|...|++|+|+|++ .++++.+|+.+. .....
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~--~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~-~~~~~ 81 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKY--AKDINCNSKNLFHVKEFPLE-------FENKLDFELAQQ-NGLLN 81 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECC--CSCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCS-SCSST
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--cccc--cceecCCCccEEEEEECCCC-------CcceEEEEeCCC-ceEee
Confidence 457899999999999999999999999 6333 34457999999999999998 466666665432 22222
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCC-----CeeEEEEccCCCeEEEEeCCCeEEE
Q psy13969 238 LRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKS-----TVMDLAWNQNGNWLVTASRDHLLKV 312 (877)
Q Consensus 238 l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~-----~V~~l~~sp~g~~l~s~s~Dg~I~i 312 (877)
+ .|...|.+++|+|++.+||+++.|+. |++||... ++..+. |.. .|.+++||||+++||+++.|++|+|
T Consensus 82 ~-~~~~~V~~vawSPdG~~LAs~s~dg~--V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkI 155 (588)
T 2j04_A 82 S-QPVCYPRVCKPSPIDDWMAVLSNNGN--VSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQF 155 (588)
T ss_dssp T-SCSCCEEEEEECSSSSCEEEEETTSC--EEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEE
T ss_pred c-CCCCcEEEEEECCCCCEEEEEeCCCc--EEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEE
Confidence 2 46888999999999999999999999 99999654 666667 665 5999999999999999999999999
Q ss_pred EEcCCCCc------ceEEE----ecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCcee---EEecCcCCCCEEEE
Q psy13969 313 FDIRNLSS------EVQTF----RGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEV---GCIPQAHDNIIWTM 379 (877)
Q Consensus 313 wd~~~~~~------~~~~~----~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~---~~~~~~h~~~V~~v 379 (877)
||+..... .+.++ .+|...|.+|+|+|++ +++++.|++|++||+...... ..+...|...|.+|
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sv 232 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDL 232 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCE
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEE
Confidence 99987321 25666 5677899999999997 678889999999999887742 34434788999999
Q ss_pred EEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeec--cCCCCeEEeccCCCCeeeecC
Q psy13969 380 AWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEM--ELNDSAVIPGMGLEDEDSVFP 451 (877)
Q Consensus 380 ~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~d~~~l~~~~g~d~~~~~~~ 451 (877)
+|+ +.+||+++ +++|++||+....... . ...|...++++.| ++++..++++. .++. ++|.
T Consensus 233 aFs--g~~LASa~-~~tIkLWd~~~~~~~~------~-~~gh~~~V~~va~~~s~d~~~La~a~-edG~-klw~ 294 (588)
T 2j04_A 233 KIV--DYKVVLTC-PGYVHKIDLKNYSISS------L-KTGSLENFHIIPLNHEKESTILLMSN-KTSY-KVLL 294 (588)
T ss_dssp EEE--TTEEEEEC-SSEEEEEETTTTEEEE------E-ECSCCSCCCEEEETTCSSCEEEEECS-SCEE-EEEE
T ss_pred EEE--CCEEEEEe-CCeEEEEECCCCeEEE------E-EcCCCceEEEEEeeeCCCCCEEEEEc-CCCC-EEEe
Confidence 999 58899887 6999999987532110 0 1146677888899 88887777765 3444 4444
No 114
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.5e-28 Score=264.65 Aligned_cols=264 Identities=7% Similarity=0.010 Sum_probs=202.2
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCcc-eEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEecc---------CCeee
Q psy13969 166 VWSHNGLWMVTSDHQGYIKYWQSNMNN-VKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFY---------RCTEE 235 (877)
Q Consensus 166 ~~spd~~~l~sg~~dg~v~iwd~~~~~-~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~---------~~~~~ 235 (877)
.+..++.+|++++.|++|++||+.... +..+. ...|.++.|+|+ |++++.|++|++|++. +.+.+
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 344578899999999999999976644 44444 467888899987 9999999999999765 34434
Q ss_pred EEec-cCCCCeEEEEEcC--CCCEEEEEecCCcccEEEEcCCCCceeEEec-cCCCCeeEEEEccCCCeEEEEeCCCeEE
Q psy13969 236 KVLR-GHGADVKCVDWHP--YKSLIVSGSKDNQQPVKLWDPKAGQALATLH-AHKSTVMDLAWNQNGNWLVTASRDHLLK 311 (877)
Q Consensus 236 ~~l~-~h~~~v~~v~~sp--~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~-~h~~~V~~l~~sp~g~~l~s~s~Dg~I~ 311 (877)
..+. .|...|.+++|+| ++++|++++.|+. |++||+++++.+..+. .|...|++++|+|++.+|++++.|+.|+
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~--i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~ 195 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGT--IGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILD 195 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCC--EEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEE
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCc--EEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 3433 5778899999999 9999999999999 9999999998876664 4556899999999999999999999999
Q ss_pred EEEcCCCCcceEEEec-CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecC--cCCCCEE--EEEEcCCCC
Q psy13969 312 VFDIRNLSSEVQTFRG-HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ--AHDNIIW--TMAWHPLGH 386 (877)
Q Consensus 312 iwd~~~~~~~~~~~~~-h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~--~h~~~V~--~v~~sp~g~ 386 (877)
|||+++.......+.. |...|++|+|+|++. +|++++.+ .|+|||+++.+.+..+.. .|...+. +++|+++++
T Consensus 196 iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~-~l~s~~~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 273 (343)
T 3lrv_A 196 VYNLSSPDQASSRFPVDEEAKIKEVKFADNGY-WMVVECDQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGK 273 (343)
T ss_dssp EEESSCTTSCCEECCCCTTSCEEEEEECTTSS-EEEEEESS-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSS
T ss_pred EEECCCCCCCccEEeccCCCCEEEEEEeCCCC-EEEEEeCC-eEEEEEcCCCCcceeecccccccccccceEEEECCCCC
Confidence 9999985444377887 999999999999988 77888844 999999998877655421 1333343 699999999
Q ss_pred EEEEEEc-CCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccC---CCCeEEeccCCCCeeeec
Q psy13969 387 ILATGSN-DHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMEL---NDSAVIPGMGLEDEDSVF 450 (877)
Q Consensus 387 ~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---d~~~l~~~~g~d~~~~~~ 450 (877)
+|++++. |+.|+||++......+. ...+..+.|.+ +...++++. .++.+.++
T Consensus 274 ~l~~~s~~d~~i~v~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~-~d~~~~~~ 329 (343)
T 3lrv_A 274 NMIAYSNESNSLTIYKFDKKTKNWT-----------KDEESALCLQSDTADFTDMDVVC-GDGGIAAI 329 (343)
T ss_dssp EEEEEETTTTEEEEEEECTTTCSEE-----------EEEEEECCC----CCCCEEEEEE-ETTEEEEE
T ss_pred EEEEecCCCCcEEEEEEcccccceE-----------ecCceeEecCccccccceeEEEe-cCCceEEE
Confidence 9999998 99999999865433221 13455666666 666666654 45555554
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.1e-27 Score=268.53 Aligned_cols=241 Identities=15% Similarity=0.145 Sum_probs=200.0
Q ss_pred ccCCEEEEEEcCCCCEE-EEEeCCCeEEEEeCC--C-cceEEEc--cCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccC
Q psy13969 158 HDCAVRHMVWSHNGLWM-VTSDHQGYIKYWQSN--M-NNVKTFQ--GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYR 231 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l-~sg~~dg~v~iwd~~--~-~~~~~~~--~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~ 231 (877)
|...|++++|++++++| ++++.|+.|+||++. . ..+..+. .|...|++|+|+|++++|++++.|+.|++|++.+
T Consensus 101 ~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~ 180 (450)
T 2vdu_B 101 IYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINS 180 (450)
T ss_dssp CCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTS
T ss_pred cCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCC
Confidence 55679999999999996 889999999999977 4 3455554 6778999999999999999999999999999987
Q ss_pred CeeeE----EeccCCCCeEEEEEcCC---CCEEEEEecCCcccEEEEcCCCCceeEE-eccCCCCeeEEEEccCCCeEEE
Q psy13969 232 CTEEK----VLRGHGADVKCVDWHPY---KSLIVSGSKDNQQPVKLWDPKAGQALAT-LHAHKSTVMDLAWNQNGNWLVT 303 (877)
Q Consensus 232 ~~~~~----~l~~h~~~v~~v~~sp~---~~~l~sgs~dg~~~I~iwd~~~~~~~~~-~~~h~~~V~~l~~sp~g~~l~s 303 (877)
..... .+..|...|++++|+|+ +++|++++.|+. |++||+++++.+.. +..|...|++++|+ ++++|++
T Consensus 181 ~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~--i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s 257 (450)
T 2vdu_B 181 IPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEH--IKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLS 257 (450)
T ss_dssp CCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSC--EEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEE
T ss_pred cccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCc--EEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEE
Confidence 76554 67789999999999999 899999999998 99999999988877 56899999999999 9999999
Q ss_pred EeCCCeEEEEEcCCCCcceEEEec-------------------------CCCCeEEEEEcCCCCcEEEEEe-CCCcEEEE
Q psy13969 304 ASRDHLLKVFDIRNLSSEVQTFRG-------------------------HKKEASAVAWHPQHEGLFSSGG-ADGSIMFW 357 (877)
Q Consensus 304 ~s~Dg~I~iwd~~~~~~~~~~~~~-------------------------h~~~v~~i~~~p~~~~~l~sgs-~dg~I~iw 357 (877)
++.|++|+|||+++ ...+..+.. +...|.+|+|++++. +|++++ .|+.|+||
T Consensus 258 ~~~d~~v~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~~~~d~~i~iw 335 (450)
T 2vdu_B 258 AGGDDKIFAWDWKT-GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP-FVAFFVEATKCIIIL 335 (450)
T ss_dssp EESSSEEEEEETTT-CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSS-EEEEEETTCSEEEEE
T ss_pred EeCCCeEEEEECCC-CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCC-EEEEEECCCCeEEEE
Confidence 99999999999998 455566552 245789999999988 556666 89999999
Q ss_pred Ec--CCC---ceeEEecCcCCCCEEEEEEcCCCCEEEEEEc------CCeEEEEeCCCC
Q psy13969 358 HV--GAD---KEVGCIPQAHDNIIWTMAWHPLGHILATGSN------DHASKFWTRNRL 405 (877)
Q Consensus 358 d~--~~~---~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~------dg~v~iwd~~~~ 405 (877)
++ ... ..+..+ ..| ..|++++|++++.++++.+. +..|.||.++..
T Consensus 336 ~~~~~~~~~l~~~~~~-~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 336 EMSEKQKGDLALKQII-TFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EECSSSTTCEEEEEEE-ECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred EeccCCCCceeeccEe-ccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 99 554 455555 455 78999999996433333333 456899987643
No 116
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=1.4e-26 Score=262.22 Aligned_cols=281 Identities=11% Similarity=0.081 Sum_probs=233.4
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEE------EccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccC
Q psy13969 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKT------FQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYR 231 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~------~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~ 231 (877)
+...+.+++|++++.++++++.++.|++||+.+..... +..|...|++++|++++.+|++++.|+.|++||+.+
T Consensus 121 ~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 121 TGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp CSSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred CCCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC
Confidence 44567799999977888888889999999988655443 347889999999999999999999999999999999
Q ss_pred CeeeEEeccCCCCeEEEEEcCCCCEEEEEe-cCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEe-----
Q psy13969 232 CTEEKVLRGHGADVKCVDWHPYKSLIVSGS-KDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTAS----- 305 (877)
Q Consensus 232 ~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs-~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s----- 305 (877)
.+.+..+..|...+.+++|++++++|++++ .|+. |++||+++++.+..+..+ ..+.+++|++++++|++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~ 277 (433)
T 3bws_A 201 LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISED--ISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASN 277 (433)
T ss_dssp CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTE--EEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCT
T ss_pred ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCc--EEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCc
Confidence 999889988999999999999999886554 7887 999999999888877654 5699999999999999988
Q ss_pred ---CCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEc
Q psy13969 306 ---RDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWH 382 (877)
Q Consensus 306 ---~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~s 382 (877)
.|+.|++||+++ ...+.. ..|...+.+++|+|++..++++++.|+.|++||+.+.+.+..+ .+...+.+++|+
T Consensus 278 ~~~~dg~i~~~d~~~-~~~~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~--~~~~~~~~~~~s 353 (433)
T 3bws_A 278 QESGGGRLGIYSMDK-EKLIDT-IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSI--PVFDKPNTIALS 353 (433)
T ss_dssp TCSCCEEEEEEETTT-TEEEEE-EEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEE--ECSSSEEEEEEC
T ss_pred cccCCCeEEEEECCC-CcEEee-ccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEe--cCCCCCCeEEEc
Confidence 588999999987 344433 3466689999999999878888899999999999998888777 467789999999
Q ss_pred CCCCEEEEEEc---------------CCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCee
Q psy13969 383 PLGHILATGSN---------------DHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDED 447 (877)
Q Consensus 383 p~g~~l~sg~~---------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~ 447 (877)
+++++|++++. |+.|++||+.+.. .... ......+..++|++++..++++...++.+
T Consensus 354 ~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~-~~~~-------~~~~~~~~~~~~s~dg~~l~~~~~~d~~i 425 (433)
T 3bws_A 354 PDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT-VKEF-------WEAGNQPTGLDVSPDNRYLVISDFLDHQI 425 (433)
T ss_dssp TTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE-EEEE-------EECSSSEEEEEECTTSCEEEEEETTTTEE
T ss_pred CCCCEEEEEecCCCccccccccccccceEEEEEECCCCc-EEEE-------ecCCCCCceEEEcCCCCEEEEEECCCCeE
Confidence 99999888887 5799999986532 1111 11123478899999999998876678999
Q ss_pred eecCCC
Q psy13969 448 SVFPSS 453 (877)
Q Consensus 448 ~~~~~~ 453 (877)
++|+..
T Consensus 426 ~v~~~~ 431 (433)
T 3bws_A 426 RVYRRD 431 (433)
T ss_dssp EEEEET
T ss_pred EEEEec
Confidence 999754
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6.7e-27 Score=284.03 Aligned_cols=255 Identities=22% Similarity=0.404 Sum_probs=214.3
Q ss_pred eEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEecc--CCeeeEEeccCCCCeEEEEEcCC--CCEEEEEecCCcccE
Q psy13969 193 VKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFY--RCTEEKVLRGHGADVKCVDWHPY--KSLIVSGSKDNQQPV 268 (877)
Q Consensus 193 ~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~--~~~~~~~l~~h~~~v~~v~~sp~--~~~l~sgs~dg~~~I 268 (877)
+..+.+|...|++++|++++++|++++.|++|+|||+. +...+..+..|...|++++|+++ +++|++++.|+. |
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~--I 79 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK--V 79 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSC--E
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCe--E
Confidence 34678999999999999999999999999999999998 55677888999999999999988 899999999999 9
Q ss_pred EEEcCCCCc--eeEEeccCCCCeeEEEEccC--CCeEEEEeCCCeEEEEEcCCCC-cceEEEecCCCCeEEEEEcCC---
Q psy13969 269 KLWDPKAGQ--ALATLHAHKSTVMDLAWNQN--GNWLVTASRDHLLKVFDIRNLS-SEVQTFRGHKKEASAVAWHPQ--- 340 (877)
Q Consensus 269 ~iwd~~~~~--~~~~~~~h~~~V~~l~~sp~--g~~l~s~s~Dg~I~iwd~~~~~-~~~~~~~~h~~~v~~i~~~p~--- 340 (877)
++||+.+++ .+..+..|...|++++|+|+ +.+|++++.|++|++||++... .....+..|...|++++|+|.
T Consensus 80 ~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 80 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (753)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccc
Confidence 999999886 67788889999999999998 9999999999999999998742 345667889999999999995
Q ss_pred ----------CCcEEEEEeCCCcEEEEEcCCCc----eeEEecCcCCCCEEEEEEcCC---CCEEEEEEcCCeEEEEeCC
Q psy13969 341 ----------HEGLFSSGGADGSIMFWHVGADK----EVGCIPQAHDNIIWTMAWHPL---GHILATGSNDHASKFWTRN 403 (877)
Q Consensus 341 ----------~~~~l~sgs~dg~I~iwd~~~~~----~~~~~~~~h~~~V~~v~~sp~---g~~l~sg~~dg~v~iwd~~ 403 (877)
+. +|++++.|+.|++||+++.. .+..+ ..|...|++++|+|+ +.+|++++.|+.|+|||+.
T Consensus 160 ~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~~-~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 160 EDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTL-EGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp -------CGGGC-CEEEEETTSCEEEEEEETTTTEEEEEEEE-CCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred cccccccCCCCC-EEEEEECCCeEEEEeccCCcccceeeeee-cCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence 44 78999999999999998763 33444 689999999999999 8999999999999999998
Q ss_pred CCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCC
Q psy13969 404 RLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~ 454 (877)
....... ........+...+.++.|++++.+++++. .|+.+++|+...
T Consensus 238 ~~~~~~~--~~~~~~~~~~~~v~~l~~spdg~~l~s~s-~Dg~I~vwd~~~ 285 (753)
T 3jro_A 238 NEQGPWK--KTLLKEEKFPDVLWRASWSLSGNVLALSG-GDNKVTLWKENL 285 (753)
T ss_dssp SSSSCCB--CCBSSSSCCSSCCCCEEECTTTCCEEEEC-SSSCEECCBCCS
T ss_pred CCCCcce--eEEeccCCCCCceEEEEEcCCCCEEEEEc-CCCEEEEEecCC
Confidence 6432211 11222334566788999999999998875 688999998874
No 118
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=2.4e-26 Score=253.31 Aligned_cols=240 Identities=22% Similarity=0.322 Sum_probs=195.6
Q ss_pred cceEEEccCCCCeeEEEEcCC---CCEEEEEECCCcEEEEeccC-Ceee-EEeccCCCCeEEEEEcCCCCEEEEEecCCc
Q psy13969 191 NNVKTFQGHKESIRGISFSPS---DSKFATCSDDGTVRVWDFYR-CTEE-KVLRGHGADVKCVDWHPYKSLIVSGSKDNQ 265 (877)
Q Consensus 191 ~~~~~~~~h~~~V~~i~~sp~---~~~l~sgs~Dg~I~iwd~~~-~~~~-~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~ 265 (877)
..+..+..|...|++|+|+++ +++|++++.|+.|+|||+.+ ...+ ..+..|...|++++|++++++|++++.|+.
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT 109 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCc
Confidence 456678899999999999998 59999999999999999986 4444 778889999999999999999999999998
Q ss_pred ccEEEEcCCCCceeEEeccCCCCeeEEEE--ccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCC--------------
Q psy13969 266 QPVKLWDPKAGQALATLHAHKSTVMDLAW--NQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHK-------------- 329 (877)
Q Consensus 266 ~~I~iwd~~~~~~~~~~~~h~~~V~~l~~--sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~-------------- 329 (877)
|++||+++.+.+. +..|...|++++| ++++.+|++++.|+.|++||+++ ...+..+..|.
T Consensus 110 --v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (368)
T 3mmy_A 110 --AKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRS-SNPMMVLQLPERCYCADVIYPMAVV 185 (368)
T ss_dssp --EEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSC-SSCSEEEECSSCEEEEEEETTEEEE
T ss_pred --EEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCC-CcEEEEEecCCCceEEEecCCeeEE
Confidence 9999999988665 5679999999999 88999999999999999999987 44444444332
Q ss_pred ---------------------------CCeEEEEEcCCCC---cEEEEEeCCCcEEEEEcCCC---ceeEEecCcCCC--
Q psy13969 330 ---------------------------KEASAVAWHPQHE---GLFSSGGADGSIMFWHVGAD---KEVGCIPQAHDN-- 374 (877)
Q Consensus 330 ---------------------------~~v~~i~~~p~~~---~~l~sgs~dg~I~iwd~~~~---~~~~~~~~~h~~-- 374 (877)
..+.++++.++.. ..+++++.|+.|+|||++.. ..+..+ ..|..
T Consensus 186 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~-~~~~~~~ 264 (368)
T 3mmy_A 186 ATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTF-KCHRSNG 264 (368)
T ss_dssp EEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEE-ECSEEC-
T ss_pred EeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceee-eeeeccc
Confidence 2334444444332 23889999999999999887 444444 45554
Q ss_pred ----------CEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccC
Q psy13969 375 ----------IIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMG 442 (877)
Q Consensus 375 ----------~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g 442 (877)
.|++++|+|++++|++++.|+.|+|||+.... . ...+..+...+.+++|++++.+|++++.
T Consensus 265 ~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~-~------~~~~~~~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 265 TNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART-K------LKTSEQLDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp ---CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE-E------EEECCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred ccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc-E------EEEecCCCCCceEEEECCCCCeEEEEec
Confidence 79999999999999999999999999997532 1 1223455667999999999999999874
No 119
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=3.8e-27 Score=263.76 Aligned_cols=291 Identities=14% Similarity=0.091 Sum_probs=195.3
Q ss_pred EEEccCCceeeccCCEEEEEEc---CCCCEEEEEeCCCeEEEEeCCCc----------ceEEEccCCCCeeEEEEc----
Q psy13969 147 MTWTPEGRRLAHDCAVRHMVWS---HNGLWMVTSDHQGYIKYWQSNMN----------NVKTFQGHKESIRGISFS---- 209 (877)
Q Consensus 147 ~~~sp~g~~l~h~~~V~~l~~s---pd~~~l~sg~~dg~v~iwd~~~~----------~~~~~~~h~~~V~~i~~s---- 209 (877)
++++++...+.-.....++.|. ++...|++.+.++.|.+|+.... .......|...+..+.|+
T Consensus 3 ~~~s~~~~~lpl~~~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (393)
T 4gq1_A 3 MTLSSNQYQLPLNVRPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCS 82 (393)
T ss_dssp CCEEEEEEECCTTCCEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCE
T ss_pred EEECCCceEecCCCCCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCcc
Confidence 3445555555555556666663 23333444445677777763210 001112233444444443
Q ss_pred ----------------CCCCEEEEEECCCcEEEEeccCCeeeE-----EeccCCCCeEEEEEcC--------CCCEEEEE
Q psy13969 210 ----------------PSDSKFATCSDDGTVRVWDFYRCTEEK-----VLRGHGADVKCVDWHP--------YKSLIVSG 260 (877)
Q Consensus 210 ----------------p~~~~l~sgs~Dg~I~iwd~~~~~~~~-----~l~~h~~~v~~v~~sp--------~~~~l~sg 260 (877)
++..+|++++.|++|+|||+.+..... .+.+|...|++|+|+| ++++||++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~ 162 (393)
T 4gq1_A 83 YSENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASV 162 (393)
T ss_dssp EECC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEE
T ss_pred ccccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEE
Confidence 345679999999999999998876533 3678999999999997 78899999
Q ss_pred ecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCC-CeEEEEeCCCeEEEEEcCCCCcce-----------------
Q psy13969 261 SKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNG-NWLVTASRDHLLKVFDIRNLSSEV----------------- 322 (877)
Q Consensus 261 s~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g-~~l~s~s~Dg~I~iwd~~~~~~~~----------------- 322 (877)
+.|++ |+|||+++...+..+..|...|.+++|+|++ .+|++++.|++|+|||+++.....
T Consensus 163 s~D~t--v~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~ 240 (393)
T 4gq1_A 163 GDDCT--LIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLN 240 (393)
T ss_dssp ETTSE--EEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEE
T ss_pred ECCCe--EEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecc
Confidence 99999 9999999988888888999999999999976 589999999999999998632211
Q ss_pred -------EEEecCCCCeEEEEEc-CCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEE--------------
Q psy13969 323 -------QTFRGHKKEASAVAWH-PQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMA-------------- 380 (877)
Q Consensus 323 -------~~~~~h~~~v~~i~~~-p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~-------------- 380 (877)
.....|...|.+++|+ +++. .|++++.|++|+|||+........+ ..|...+..++
T Consensus 241 ~~~~~~~~~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (393)
T 4gq1_A 241 TLPLVNTCHSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFANNDYNEI-SDSTMKLGPKNLLPNVQGISLFPSL 318 (393)
T ss_dssp SGGGC------CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCS
T ss_pred cccceeeeecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECccCCCCceE-eeecCccccEEEccccccccccCcc
Confidence 1234677889999997 5665 8899999999999999877655544 33433333333
Q ss_pred ----EcC--CCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeec
Q psy13969 381 ----WHP--LGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVF 450 (877)
Q Consensus 381 ----~sp--~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~ 450 (877)
|++ ++.++++++.|++|+|||+....... ....+...|.+++|++|+.+|++++ ++.+.+|
T Consensus 319 ~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~-------~~~~~~~~V~svafspdG~~LA~as--~~Gv~lv 385 (393)
T 4gq1_A 319 LGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNS-------IPIQLGMPIVDFCWHQDGSHLAIAT--EGSVLLT 385 (393)
T ss_dssp SCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCE-------EEEECSSCEEEEEECTTSSEEEEEE--SSEEEEE
T ss_pred eeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEE-------EecCCCCcEEEEEEcCCCCEEEEEe--CCCeEEE
Confidence 333 23467788899999999997643221 1234556799999999999999875 4455555
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=1.1e-25 Score=248.02 Aligned_cols=254 Identities=10% Similarity=0.157 Sum_probs=196.5
Q ss_pred CccCCeEEEEEccCCceee---------------------ccCCEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCcceEEE
Q psy13969 139 KMRCPIFSMTWTPEGRRLA---------------------HDCAVRHMVWSHNGLWM-VTSDHQGYIKYWQSNMNNVKTF 196 (877)
Q Consensus 139 ~~~~~i~~~~~sp~g~~l~---------------------h~~~V~~l~~spd~~~l-~sg~~dg~v~iwd~~~~~~~~~ 196 (877)
.+...|.+++|+|++++|+ +...+..++|+++.+++ ++++.|++|+|||..+......
T Consensus 17 ~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~ 96 (355)
T 3vu4_A 17 HVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSR 96 (355)
T ss_dssp --CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEE
Confidence 3456677888888887773 22346778888888877 4677889999999877654444
Q ss_pred ccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCC-eeeEEeccCCCCeEEEEEcCCCCEEEE--EecCCcccEEEEcC
Q psy13969 197 QGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRC-TEEKVLRGHGADVKCVDWHPYKSLIVS--GSKDNQQPVKLWDP 273 (877)
Q Consensus 197 ~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~-~~~~~l~~h~~~v~~v~~sp~~~~l~s--gs~dg~~~I~iwd~ 273 (877)
..|...|.+++|+++ .++++. |+.|+|||+.+. +.+..+.. ....+++++ .++++ ++.|+. |++||+
T Consensus 97 ~~~~~~v~~v~~~~~--~~~~~~-~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~--v~iwd~ 166 (355)
T 3vu4_A 97 IKVDAPVKDLFLSRE--FIVVSY-GDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQ--IHITKL 166 (355)
T ss_dssp EECSSCEEEEEECSS--EEEEEE-TTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTC--EEEEEC
T ss_pred EECCCceEEEEEcCC--EEEEEE-cCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcE--EEEEEC
Confidence 457789999999865 455444 789999999887 66655554 445566666 66666 478888 999999
Q ss_pred CCCc----------------eeEEeccCCCCeeEEEEccCCCeEEEEeCCCe-EEEEEcCCCCcceEEEe-c-CCCCeEE
Q psy13969 274 KAGQ----------------ALATLHAHKSTVMDLAWNQNGNWLVTASRDHL-LKVFDIRNLSSEVQTFR-G-HKKEASA 334 (877)
Q Consensus 274 ~~~~----------------~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~-I~iwd~~~~~~~~~~~~-~-h~~~v~~ 334 (877)
++.. .+..+..|...|++|+|+|++++||+++.|++ |+|||+++ ...+..+. + |...|++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~-~~~~~~~~~g~h~~~v~~ 245 (355)
T 3vu4_A 167 QSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED-GVLVREFRRGLDRADVVD 245 (355)
T ss_dssp CC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT-CCEEEEEECTTCCSCEEE
T ss_pred CCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC-CcEEEEEEcCCCCCcEEE
Confidence 9765 27788999999999999999999999999998 99999998 56777777 5 9999999
Q ss_pred EEEcCCCCcEEEEEeCCCcEEEEEcCCCcee--EE--------------------ecCcCCCCEEEEEEcCCCCEEEEEE
Q psy13969 335 VAWHPQHEGLFSSGGADGSIMFWHVGADKEV--GC--------------------IPQAHDNIIWTMAWHPLGHILATGS 392 (877)
Q Consensus 335 i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~--~~--------------------~~~~h~~~V~~v~~sp~g~~l~sg~ 392 (877)
++|+|++. +|++++.|++|+|||+...... .. +...+......++|++++++|++++
T Consensus 246 ~~~s~~~~-~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~ 324 (355)
T 3vu4_A 246 MKWSTDGS-KLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWP 324 (355)
T ss_dssp EEECTTSC-EEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEET
T ss_pred EEECCCCC-EEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEe
Confidence 99999988 8899999999999999764311 11 1111122346799999999999999
Q ss_pred cCCeEEEEeCCC
Q psy13969 393 NDHASKFWTRNR 404 (877)
Q Consensus 393 ~dg~v~iwd~~~ 404 (877)
.|+.+++|++..
T Consensus 325 ~dg~~~~~~~~~ 336 (355)
T 3vu4_A 325 HTRMIETFKVVF 336 (355)
T ss_dssp TTTEEEEEEEEE
T ss_pred CCCeEEEEEEEc
Confidence 999999999864
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=4.2e-25 Score=246.50 Aligned_cols=266 Identities=12% Similarity=0.114 Sum_probs=215.8
Q ss_pred CEEEEEeCCCeEEEEeCCCcceE-EEccCCCCeeEEEEcCCCCEE-EEEECCCcEEEEeccCCeeeEEeccCCCCeEEEE
Q psy13969 172 LWMVTSDHQGYIKYWQSNMNNVK-TFQGHKESIRGISFSPSDSKF-ATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVD 249 (877)
Q Consensus 172 ~~l~sg~~dg~v~iwd~~~~~~~-~~~~h~~~V~~i~~sp~~~~l-~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~ 249 (877)
.++++++.|+.|++||+....+. .+..| ..+.+++|++++++| ++++.|++|++||+.+++.+..+..+. .+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~ 80 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceE
Confidence 35778999999999998876554 44444 568999999999977 566689999999999999888887555 899999
Q ss_pred EcCCCCEEEEEe-cCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeE-EEEeCCCeEEEEEcCCCCcceEEEec
Q psy13969 250 WHPYKSLIVSGS-KDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWL-VTASRDHLLKVFDIRNLSSEVQTFRG 327 (877)
Q Consensus 250 ~sp~~~~l~sgs-~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l-~s~s~Dg~I~iwd~~~~~~~~~~~~~ 327 (877)
|+|++++|++++ .++. |++||+.+++.+..+.. ...+.+++|++++++| ++++.|+.|++||+++ ...+..+..
T Consensus 81 ~spdg~~l~~~~~~~~~--v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~~ 156 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASST--LSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT-KAVINTVSV 156 (391)
T ss_dssp ECTTSSEEEEEETTTTE--EEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEEC
T ss_pred ECCCCCEEEEEECCCCE--EEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC-CcEEEEEec
Confidence 999999876554 5677 99999999988887765 4578999999999977 6777899999999987 456666665
Q ss_pred CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEE---cCCeEEEEeCCC
Q psy13969 328 HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGS---NDHASKFWTRNR 404 (877)
Q Consensus 328 h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~---~dg~v~iwd~~~ 404 (877)
| ..+.+++|++++..++++++.|+.|++||+.+.+.+..+ .+...+.+++|++++++|++++ .++.|++||+..
T Consensus 157 ~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~ 233 (391)
T 1l0q_A 157 G-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTV--KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT 233 (391)
T ss_dssp C-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE--ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT
T ss_pred C-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEE--ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCC
Confidence 4 567999999999877788889999999999998887776 4566899999999999998888 689999999875
Q ss_pred CCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCC
Q psy13969 405 LGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~ 454 (877)
... +.. + .....+..+.|++++..++.+...++.+++|+..+
T Consensus 234 ~~~-~~~------~-~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 234 NKI-TAR------I-PVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp TEE-EEE------E-ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CeE-EEE------E-ecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 321 111 1 11223678899999998876667889999998765
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=3.1e-26 Score=242.28 Aligned_cols=232 Identities=14% Similarity=0.201 Sum_probs=175.6
Q ss_pred cCCeEEEEEccCCcee-------eccCCEEEEEEcCC----CCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEc
Q psy13969 141 RCPIFSMTWTPEGRRL-------AHDCAVRHMVWSHN----GLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFS 209 (877)
Q Consensus 141 ~~~i~~~~~sp~g~~l-------~h~~~V~~l~~spd----~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~s 209 (877)
..+|..+.+.||-.-| -+...|++|+|+|| +.++++++.+ +.+|+ +
T Consensus 86 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~------------------l--- 142 (356)
T 2w18_A 86 EVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNI--KAVLG------------------L--- 142 (356)
T ss_dssp SSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEE--EEEEE------------------E---
T ss_pred CceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCe--EEEEe------------------c---
Confidence 3467777777765433 25567888888888 7777776633 55553 2
Q ss_pred CCCCEEEEEE--CCCcEEEEec-cCCeeeEEeccCCCCeEEEEEcC---CCCEEEEEecCCcccEEEEcCCCCceeEEec
Q psy13969 210 PSDSKFATCS--DDGTVRVWDF-YRCTEEKVLRGHGADVKCVDWHP---YKSLIVSGSKDNQQPVKLWDPKAGQALATLH 283 (877)
Q Consensus 210 p~~~~l~sgs--~Dg~I~iwd~-~~~~~~~~l~~h~~~v~~v~~sp---~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~ 283 (877)
++++++.++. .|+.|++|++ .+++.+..+..|...++.++|++ ++.+|++++.|++ |+|||++++++++++.
T Consensus 143 ~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~T--IkIWDl~TGk~l~tL~ 220 (356)
T 2w18_A 143 TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNN--IVIWNLKTGQLLKKMH 220 (356)
T ss_dssp TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSE--EEEEETTTCCEEEEEE
T ss_pred CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCc--EEEEECCCCcEEEEEc
Confidence 3444454433 4899999999 44777788889999999999999 7799999999999 9999999999999998
Q ss_pred cCC---CCeeEEEEccCCCeE------------EEEeCCCeEEEEEcCCCCcceEEE-----ecCCCCeEEEEEcCCCCc
Q psy13969 284 AHK---STVMDLAWNQNGNWL------------VTASRDHLLKVFDIRNLSSEVQTF-----RGHKKEASAVAWHPQHEG 343 (877)
Q Consensus 284 ~h~---~~V~~l~~sp~g~~l------------~s~s~Dg~I~iwd~~~~~~~~~~~-----~~h~~~v~~i~~~p~~~~ 343 (877)
.|. ..|.+++|+|++.++ ++++.|.+|++||..+ ...+.++ .+|...+.+..++ +.
T Consensus 221 g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t-gk~l~v~~~~~p~Gh~~~~lsg~~s--g~- 296 (356)
T 2w18_A 221 IDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT-TLSVGVMLYCLPPGQAGRFLEGDVK--DH- 296 (356)
T ss_dssp CCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT-TEEEEEEEECCCTTCCCCEEEEEEE--TT-
T ss_pred CCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC-CEEEEEEEeeccCCCcceeEccccC--CC-
Confidence 654 467788999999876 5678899999999987 4555444 3566555555554 44
Q ss_pred EEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEE-EEEEcCCCCEEEEEEcCCeEEEEeC
Q psy13969 344 LFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIW-TMAWHPLGHILATGSNDHASKFWTR 402 (877)
Q Consensus 344 ~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~-~v~~sp~g~~l~sg~~dg~v~iwd~ 402 (877)
++++++.|++|+|||+.+++++..+ ..|...+. +++||||+++|++++.|++|+|||+
T Consensus 297 ~lASgS~DgTIkIWDl~tGk~l~tL-~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 297 CAAAILTSGTIAIWDLLLGQCTALL-PPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEEETTSCEEEEETTTCSEEEEE-CCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEe-cCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 8999999999999999999999988 56766544 6899999999999999999999995
No 123
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.4e-25 Score=246.08 Aligned_cols=231 Identities=9% Similarity=0.060 Sum_probs=185.0
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC---------cc-eEEE-ccCCCCeeEEEEcC--CCCEEEEEECCCcEE
Q psy13969 159 DCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM---------NN-VKTF-QGHKESIRGISFSP--SDSKFATCSDDGTVR 225 (877)
Q Consensus 159 ~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~---------~~-~~~~-~~h~~~V~~i~~sp--~~~~l~sgs~Dg~I~ 225 (877)
...|.++.|+|+ |++++.|++|++|+.+. .. +..+ ..|...|.+++|+| ++++|++++.|++|+
T Consensus 76 ~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~ 152 (343)
T 3lrv_A 76 TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIG 152 (343)
T ss_dssp EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEE
T ss_pred cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEE
Confidence 356777888888 99999999999997653 22 3333 36778999999999 999999999999999
Q ss_pred EEeccCCeeeEEec-cCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCcee-EEecc-CCCCeeEEEEccCCCeEE
Q psy13969 226 VWDFYRCTEEKVLR-GHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQAL-ATLHA-HKSTVMDLAWNQNGNWLV 302 (877)
Q Consensus 226 iwd~~~~~~~~~l~-~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~-~~~~~-h~~~V~~l~~sp~g~~l~ 302 (877)
+||+.+.+.+..+. .|...|++++|+|++.+|++++.|+. |++||+++++.+ ..+.. |...|++|+|+|++.+|+
T Consensus 153 ~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~--i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~ 230 (343)
T 3lrv_A 153 FQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGI--LDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMV 230 (343)
T ss_dssp EEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSC--EEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEE
T ss_pred EEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCE--EEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEE
Confidence 99999988876664 35568999999999999999999999 999999999887 88888 999999999999999999
Q ss_pred EEeCCCeEEEEEcCCCCcceEEEe---cCCCCeE--EEEEcCCCCcEEEEEeC-CCcEEEEEcCCCceeEEecCcCCCCE
Q psy13969 303 TASRDHLLKVFDIRNLSSEVQTFR---GHKKEAS--AVAWHPQHEGLFSSGGA-DGSIMFWHVGADKEVGCIPQAHDNII 376 (877)
Q Consensus 303 s~s~Dg~I~iwd~~~~~~~~~~~~---~h~~~v~--~i~~~p~~~~~l~sgs~-dg~I~iwd~~~~~~~~~~~~~h~~~V 376 (877)
+++.+ +|+|||+++. ..+..+. .|...+. +++|+|++. +|++++. |+.|+||++......... ..+
T Consensus 231 s~~~~-~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~s~~d~~i~v~~~~~~~~~~~~-----~~~ 302 (343)
T 3lrv_A 231 VECDQ-TVVCFDLRKD-VGTLAYPTYTIPEFKTGTVTYDIDDSGK-NMIAYSNESNSLTIYKFDKKTKNWTK-----DEE 302 (343)
T ss_dssp EEESS-BEEEEETTSS-TTCBSSCCCBC-----CCEEEEECTTSS-EEEEEETTTTEEEEEEECTTTCSEEE-----EEE
T ss_pred EEeCC-eEEEEEcCCC-CcceeecccccccccccceEEEECCCCC-EEEEecCCCCcEEEEEEcccccceEe-----cCc
Confidence 99955 9999999984 3333332 2444444 699999998 7778777 999999999765543322 457
Q ss_pred EEEEEcC---CCCEEEEEEcCCeEEEEeC
Q psy13969 377 WTMAWHP---LGHILATGSNDHASKFWTR 402 (877)
Q Consensus 377 ~~v~~sp---~g~~l~sg~~dg~v~iwd~ 402 (877)
..++|++ +...|++++.|+.+.++-.
T Consensus 303 ~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 303 SALCLQSDTADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp EECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred eeEecCccccccceeEEEecCCceEEEEe
Confidence 7888988 7889999999999998854
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.93 E-value=6.5e-24 Score=236.79 Aligned_cols=241 Identities=17% Similarity=0.165 Sum_probs=196.2
Q ss_pred eccCCEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEE-CCCcEEEEeccCCee
Q psy13969 157 AHDCAVRHMVWSHNGLWM-VTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCS-DDGTVRVWDFYRCTE 234 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l-~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs-~Dg~I~iwd~~~~~~ 234 (877)
.+...+.+++|++++++| ++++.++.|++||+.+..+.....+...|.+++|++++++|++++ .|+.|++||+.+.+.
T Consensus 29 ~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~ 108 (391)
T 1l0q_A 29 PVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV 108 (391)
T ss_dssp ECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred ecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeE
Confidence 345569999999999977 677799999999987765544444445999999999999876555 579999999999988
Q ss_pred eEEeccCCCCeEEEEEcCCCCEE-EEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeE-EEEeCCCeEEE
Q psy13969 235 EKVLRGHGADVKCVDWHPYKSLI-VSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWL-VTASRDHLLKV 312 (877)
Q Consensus 235 ~~~l~~h~~~v~~v~~sp~~~~l-~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l-~s~s~Dg~I~i 312 (877)
+..+.. ...+.+++|++++++| ++++.++. |++||+.+++.+..+..| ..+.+++|++++++| ++++.|+.|++
T Consensus 109 ~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~--v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~ 184 (391)
T 1l0q_A 109 AGTVKT-GKSPLGLALSPDGKKLYVTNNGDKT--VSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISV 184 (391)
T ss_dssp EEEEEC-SSSEEEEEECTTSSEEEEEETTTTE--EEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred EEEEeC-CCCcceEEECCCCCEEEEEeCCCCE--EEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEE
Confidence 888774 4578999999999977 67777887 999999999988888765 567999999999887 56678899999
Q ss_pred EEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEe--CCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEE-E
Q psy13969 313 FDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGG--ADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHIL-A 389 (877)
Q Consensus 313 wd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs--~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l-~ 389 (877)
||+++ ...+..+. +...+.+++|++++..+++++. .++.|++||+.+.+.+..+. .| ..+.+++|++++++| +
T Consensus 185 ~d~~~-~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~-~~~~~~~~s~dg~~l~~ 260 (391)
T 1l0q_A 185 IDTVT-NSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP-VG-PDPAGIAVTPDGKKVYV 260 (391)
T ss_dssp EETTT-TEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEE-CC-SSEEEEEECTTSSEEEE
T ss_pred EECCC-CeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEe-cC-CCccEEEEccCCCEEEE
Confidence 99987 44455544 5668999999999985555444 78999999999998887773 33 358999999999877 6
Q ss_pred EEEcCCeEEEEeCCCC
Q psy13969 390 TGSNDHASKFWTRNRL 405 (877)
Q Consensus 390 sg~~dg~v~iwd~~~~ 405 (877)
+++.|+.|++||+...
T Consensus 261 s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 261 ALSFXNTVSVIDTATN 276 (391)
T ss_dssp EETTTTEEEEEETTTT
T ss_pred EcCCCCEEEEEECCCC
Confidence 6688999999999763
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=5.7e-24 Score=240.75 Aligned_cols=239 Identities=10% Similarity=0.041 Sum_probs=200.1
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ceEEEccCCCCeeEEEEcCCCCEEEEEE-CCCcEEEEeccCCee
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NVKTFQGHKESIRGISFSPSDSKFATCS-DDGTVRVWDFYRCTE 234 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~~~~~~h~~~V~~i~~sp~~~~l~sgs-~Dg~I~iwd~~~~~~ 234 (877)
.|...|.+++|++++.++++++.|+.|++||++.. .+..+..|...+.+++|++++++|++++ .|+.|++||+.+++.
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~ 246 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE 246 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE
Confidence 36778999999999999999999999999998764 4567778999999999999999886555 799999999999888
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEec--------CCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeE-EEEe
Q psy13969 235 EKVLRGHGADVKCVDWHPYKSLIVSGSK--------DNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWL-VTAS 305 (877)
Q Consensus 235 ~~~l~~h~~~v~~v~~sp~~~~l~sgs~--------dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l-~s~s 305 (877)
+..+.. ...+.+++|++++++|++++. |+. |++||+++++.+..+ .|...+.+++|++++++| ++++
T Consensus 247 ~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~--i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~ 322 (433)
T 3bws_A 247 IRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGR--LGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDM 322 (433)
T ss_dssp EEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEE--EEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEET
T ss_pred EEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCe--EEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEec
Confidence 877775 456999999999999998884 667 999999998877665 456689999999999755 5568
Q ss_pred CCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeC---------------CCcEEEEEcCCCceeEEecC
Q psy13969 306 RDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGA---------------DGSIMFWHVGADKEVGCIPQ 370 (877)
Q Consensus 306 ~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~---------------dg~I~iwd~~~~~~~~~~~~ 370 (877)
.|+.|++||+.+ ...+..+. +...+.+++|++++..+ ++++. |+.|++||+.+.+.+..+.
T Consensus 323 ~~~~v~v~d~~~-~~~~~~~~-~~~~~~~~~~s~dg~~l-~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~- 398 (433)
T 3bws_A 323 CCSKIEVYDLKE-KKVQKSIP-VFDKPNTIALSPDGKYL-YVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE- 398 (433)
T ss_dssp TTTEEEEEETTT-TEEEEEEE-CSSSEEEEEECTTSSEE-EEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE-
T ss_pred CCCEEEEEECCC-CcEEEEec-CCCCCCeEEEcCCCCEE-EEEecCCCccccccccccccceEEEEEECCCCcEEEEec-
Confidence 999999999987 45555554 77889999999999844 44444 5699999999998887773
Q ss_pred cCCCCEEEEEEcCCCCEEEEEEc-CCeEEEEeCCC
Q psy13969 371 AHDNIIWTMAWHPLGHILATGSN-DHASKFWTRNR 404 (877)
Q Consensus 371 ~h~~~V~~v~~sp~g~~l~sg~~-dg~v~iwd~~~ 404 (877)
+...+.+++|+|++++|++++. |+.|++|+++.
T Consensus 399 -~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 399 -AGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp -CSSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred -CCCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 3557999999999999998875 99999999863
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=2.5e-24 Score=227.77 Aligned_cols=213 Identities=11% Similarity=0.092 Sum_probs=167.8
Q ss_pred CCccCCeEEEEEccC----Cceee---ccCCEEEEEEcCCCCEEEEEe--CCCeEEEEeCCC--cceEEEccCCCCeeEE
Q psy13969 138 NKMRCPIFSMTWTPE----GRRLA---HDCAVRHMVWSHNGLWMVTSD--HQGYIKYWQSNM--NNVKTFQGHKESIRGI 206 (877)
Q Consensus 138 ~~~~~~i~~~~~sp~----g~~l~---h~~~V~~l~~spd~~~l~sg~--~dg~v~iwd~~~--~~~~~~~~h~~~V~~i 206 (877)
+-....|.+++++|+ ++.++ |...|..+ ++++++.++. .|+.|++|++.. ..+..+..|...|+.+
T Consensus 108 ~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l 184 (356)
T 2w18_A 108 NLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETIL 184 (356)
T ss_dssp SSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEE
T ss_pred cccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeE
Confidence 445567999999999 77775 44445443 4666666644 699999999743 4567788999999999
Q ss_pred EEcC---CCCEEEEEECCCcEEEEeccCCeeeEEeccCC---CCeEEEEEcCCCCEE------------EEEecCCcccE
Q psy13969 207 SFSP---SDSKFATCSDDGTVRVWDFYRCTEEKVLRGHG---ADVKCVDWHPYKSLI------------VSGSKDNQQPV 268 (877)
Q Consensus 207 ~~sp---~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~---~~v~~v~~sp~~~~l------------~sgs~dg~~~I 268 (877)
+|++ ++.+||+++.|++|+|||+.++++++++..|. ..|.+++|+|++.++ ++++.|++ |
T Consensus 185 ~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~t--I 262 (356)
T 2w18_A 185 TFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQ--L 262 (356)
T ss_dssp EEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEE--E
T ss_pred EeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcE--E
Confidence 9999 77999999999999999999999999998654 467888999999876 56778887 9
Q ss_pred EEEcCCCCceeEEe-----ccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeE-EEEEcCCCC
Q psy13969 269 KLWDPKAGQALATL-----HAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEAS-AVAWHPQHE 342 (877)
Q Consensus 269 ~iwd~~~~~~~~~~-----~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~-~i~~~p~~~ 342 (877)
++||..+++.+..+ .+|...+.+.+++ +.++|+++.|++|+|||+.+ .+.+.++..|...+. +++|+|++.
T Consensus 263 klWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~t-Gk~l~tL~gH~~~vvs~vafSPDG~ 339 (356)
T 2w18_A 263 IVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLL-GQCTALLPPVSDQHWSFVKWSGTDS 339 (356)
T ss_dssp EEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTT-CSEEEEECCC--CCCCEEEECSSSS
T ss_pred EEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCC-CcEEEEecCCCCCeEEEEEECCCCC
Confidence 99999999887765 3666666555554 78999999999999999998 678889998987655 689999998
Q ss_pred cEEEEEeCCCcEEEEEc
Q psy13969 343 GLFSSGGADGSIMFWHV 359 (877)
Q Consensus 343 ~~l~sgs~dg~I~iwd~ 359 (877)
+|+||+.|++|+|||+
T Consensus 340 -~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 340 -HLLAGQKDGNIFVYHY 355 (356)
T ss_dssp -EEEEECTTSCEEEEEE
T ss_pred -EEEEEECCCcEEEecC
Confidence 8899999999999996
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=2.5e-22 Score=226.11 Aligned_cols=263 Identities=10% Similarity=0.009 Sum_probs=204.0
Q ss_pred eccCCEEEEEEcC--------------CCCEEEEEeCC------CeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEE
Q psy13969 157 AHDCAVRHMVWSH--------------NGLWMVTSDHQ------GYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFA 216 (877)
Q Consensus 157 ~h~~~V~~l~~sp--------------d~~~l~sg~~d------g~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~ 216 (877)
.|...++++++++ .+..|++++.+ +.|++||++...+..+..|...|.+++|+|++++|+
T Consensus 115 ~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la 194 (415)
T 2hqs_A 115 VNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLA 194 (415)
T ss_dssp ECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEE
T ss_pred cChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEE
Confidence 4555566666554 15566655543 799999999888889999999999999999999999
Q ss_pred EEECCC---cEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEE-EEecCCcccEEEEcCCCCceeEEeccCCCCeeEE
Q psy13969 217 TCSDDG---TVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIV-SGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDL 292 (877)
Q Consensus 217 sgs~Dg---~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~-sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l 292 (877)
+++.|+ .|++||+.+++.. .+..|...+.+++|+|++++|+ +++.++...|++||+.+++. ..+..|...+.++
T Consensus 195 ~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~ 272 (415)
T 2hqs_A 195 YVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEP 272 (415)
T ss_dssp EEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEE
T ss_pred EEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccce
Confidence 999885 9999999987765 5666888999999999999877 66666555599999998775 5777888999999
Q ss_pred EEccCCCeEEEEeCC-C--eEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCC--CcEEEEEcCCCceeEE
Q psy13969 293 AWNQNGNWLVTASRD-H--LLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGAD--GSIMFWHVGADKEVGC 367 (877)
Q Consensus 293 ~~sp~g~~l~s~s~D-g--~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~d--g~I~iwd~~~~~~~~~ 367 (877)
+|+||+++|++++.+ + .|++||+... .+..+..|...+.+++|+|++..++++...+ ..|++||+.+++.. .
T Consensus 273 ~~spdg~~l~~~s~~~g~~~i~~~d~~~~--~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~ 349 (415)
T 2hqs_A 273 TWFPDSQNLAFTSDQAGRPQVYKVNINGG--APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-V 349 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTSS--CCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-E
T ss_pred EECCCCCEEEEEECCCCCcEEEEEECCCC--CEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-E
Confidence 999999999988864 4 6777888763 3455666778899999999999554444442 58999999987764 3
Q ss_pred ecCcCCCCEEEEEEcCCCCEEEEEEcCC---eEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCC
Q psy13969 368 IPQAHDNIIWTMAWHPLGHILATGSNDH---ASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELND 434 (877)
Q Consensus 368 ~~~~h~~~V~~v~~sp~g~~l~sg~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~ 434 (877)
+ ..|. .+.+++|+|++++|++++.++ .|++||+... .. ..+..+...+.+++|++..
T Consensus 350 l-~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~--~~------~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 350 L-SSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR--FK------ARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp C-CCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC--CE------EECCCSSSEEEEEEECCCC
T ss_pred e-cCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC--cE------EEeeCCCCCCcCCcccccc
Confidence 4 3443 899999999999999888877 7999998631 11 1233445568888888753
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=6.2e-22 Score=230.05 Aligned_cols=287 Identities=15% Similarity=0.122 Sum_probs=221.7
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeC--CCcc-eEEEccCCCCeeEEEEcC----CCCEEEEEEC-CCcEEEEeccCC
Q psy13969 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQS--NMNN-VKTFQGHKESIRGISFSP----SDSKFATCSD-DGTVRVWDFYRC 232 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~~dg~v~iwd~--~~~~-~~~~~~h~~~V~~i~~sp----~~~~l~sgs~-Dg~I~iwd~~~~ 232 (877)
.+.+++|+||+++|++++.+++|++||+ .+.. +..+. +...++.|+|+| ++++|++++. +++|.|||..+.
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~ 258 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL 258 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTC
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccc
Confidence 3899999999999999999999999999 5443 44555 556689999999 9999999885 899999999999
Q ss_pred eeeEEeccC-----------CCCeEEEEEcCCCCE-EEEEecCCcccEEEEcCCCCceeE--EeccCCCCeeEEEEccCC
Q psy13969 233 TEEKVLRGH-----------GADVKCVDWHPYKSL-IVSGSKDNQQPVKLWDPKAGQALA--TLHAHKSTVMDLAWNQNG 298 (877)
Q Consensus 233 ~~~~~l~~h-----------~~~v~~v~~sp~~~~-l~sgs~dg~~~I~iwd~~~~~~~~--~~~~h~~~V~~l~~sp~g 298 (877)
+.+..+..+ ...+.++.+++++.. +++...++. |.+||+.+.+.+. .+ .+...+.++.|+|++
T Consensus 259 ~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~--i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg 335 (543)
T 1nir_A 259 EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK--VLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSH 335 (543)
T ss_dssp CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTE--EEEEECTTSSSCEEEEE-ECCSSCCCEEECTTS
T ss_pred ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCe--EEEEEecCCCcceeEEe-ccCcCccCceECCCC
Confidence 888887642 237899999998764 556666676 9999998866544 33 356778999999999
Q ss_pred CeEEEEe-CCCeEEEEEcCCCCcceEEEec----CCCCeEEEEEcCCCCcEEEEEe-CCCcEEEEEcCC-------Ccee
Q psy13969 299 NWLVTAS-RDHLLKVFDIRNLSSEVQTFRG----HKKEASAVAWHPQHEGLFSSGG-ADGSIMFWHVGA-------DKEV 365 (877)
Q Consensus 299 ~~l~s~s-~Dg~I~iwd~~~~~~~~~~~~~----h~~~v~~i~~~p~~~~~l~sgs-~dg~I~iwd~~~-------~~~~ 365 (877)
++|++++ .+++|.+||+.+ .+++.++.. |......+ ++|++..+++|++ .|++|.|||+.+ .+.+
T Consensus 336 ~~l~va~~~~~~v~v~D~~t-g~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v 413 (543)
T 1nir_A 336 RYFMTAANNSNKVAVIDSKD-RRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKV 413 (543)
T ss_dssp CEEEEEEGGGTEEEEEETTT-TEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEE
T ss_pred CEEEEEecCCCeEEEEECCC-CeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEE
Confidence 9877665 588999999998 566666664 54444443 5777555788876 589999999988 7788
Q ss_pred EEecCcCCCCEEEEEEcCCCCEEEEEE-------cCCeEEEEeCCCCCCCccccccc---CCcceeeeeeeeeeccCCCC
Q psy13969 366 GCIPQAHDNIIWTMAWHPLGHILATGS-------NDHASKFWTRNRLGDPMRDRYNQ---KGLAHCITGVYNEEMELNDS 435 (877)
Q Consensus 366 ~~~~~~h~~~V~~v~~sp~g~~l~sg~-------~dg~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~d~~ 435 (877)
..+ ..|...+..|+|||++++|++++ .+.+|.|||+.+....... ... ..+......+..++|++++.
T Consensus 414 ~~l-~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~g~ 491 (543)
T 1nir_A 414 AEL-QGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQV-LPIAEWADLGEGAKRVVQPEYNKRGD 491 (543)
T ss_dssp EEE-ECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEE-ECHHHHHCCCSSCCEEEEEEECSSSS
T ss_pred EEE-EcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEE-eechhhcccCCCCCceEeccCCCCCC
Confidence 887 57777888999999999999987 3779999999876433111 110 01223356788999999999
Q ss_pred eEEeccC----CCCeeeecCCCCc
Q psy13969 436 AVIPGMG----LEDEDSVFPSSEP 455 (877)
Q Consensus 436 ~l~~~~g----~d~~~~~~~~~~~ 455 (877)
.++++.. .++.|.+|+..+.
T Consensus 492 ~~~~s~~~~~~~~~~i~v~D~~t~ 515 (543)
T 1nir_A 492 EVWFSVWNGKNDSSALVVVDDKTL 515 (543)
T ss_dssp EEEEEEECCTTSCCEEEEEETTTT
T ss_pred EEEEEeecCCCCCCeEEEEECCCc
Confidence 9998743 4689999987653
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=2.3e-22 Score=213.68 Aligned_cols=259 Identities=12% Similarity=0.117 Sum_probs=199.4
Q ss_pred EEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccC-CeeeEEeccC-CCCeEEEEEcCC
Q psy13969 176 TSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYR-CTEEKVLRGH-GADVKCVDWHPY 253 (877)
Q Consensus 176 sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~-~~~~~~l~~h-~~~v~~v~~sp~ 253 (877)
..+.++.|++||+.+.....+..|...|.+++|+|++++|++++ ++.|++||+.+ .+....+..+ ...|.+++|+|+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD 95 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred CCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCC
Confidence 34678999999999888888888999999999999999999987 78999999988 7776666555 367899999999
Q ss_pred CCEEEEEecC--CcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEE-EEeCCCeEEEEEcCCCCcceEEEecCCC
Q psy13969 254 KSLIVSGSKD--NQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLV-TASRDHLLKVFDIRNLSSEVQTFRGHKK 330 (877)
Q Consensus 254 ~~~l~sgs~d--g~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~-s~s~Dg~I~iwd~~~~~~~~~~~~~h~~ 330 (877)
+++|++++.+ +...|.+||+.+++ ...+..+ ..+.+++|+|++++|+ +++.|+.++||+++........+..|..
T Consensus 96 g~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 173 (297)
T 2ojh_A 96 GALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEG 173 (297)
T ss_dssp SSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSS
T ss_pred CCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCC
Confidence 9999999843 44236666666555 3444443 3489999999999887 6778999999997654455667777888
Q ss_pred CeEEEEEcCCCCcEEEEEeCCCcEEEEEcC-CCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcC-----------CeEE
Q psy13969 331 EASAVAWHPQHEGLFSSGGADGSIMFWHVG-ADKEVGCIPQAHDNIIWTMAWHPLGHILATGSND-----------HASK 398 (877)
Q Consensus 331 ~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~-~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~d-----------g~v~ 398 (877)
.+.+++|+|++..+++++..++.++||++. ....+..+ ..|...+.+++|+|++++|++++.+ ..|+
T Consensus 174 ~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~ 252 (297)
T 2ojh_A 174 RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI-TDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQ 252 (297)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC-CCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEE
T ss_pred ccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE-ecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEE
Confidence 999999999998666666679999999986 44455555 5677789999999999999888876 5699
Q ss_pred EEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCC
Q psy13969 399 FWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGL 443 (877)
Q Consensus 399 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~ 443 (877)
+||+...... . ...+..+...+..+.|++++..|+++...
T Consensus 253 ~~d~~~~~~~--~---~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 253 LMDMDGGNVE--T---LFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp EEETTSCSCE--E---EEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred EEecCCCCce--e---eeccCCCCcccccceECCCCCEEEEEEec
Confidence 9998753211 0 11111233457788999999999887643
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=1.6e-21 Score=226.69 Aligned_cols=285 Identities=12% Similarity=0.131 Sum_probs=217.0
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCcc-eEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEec--cCCeeeEEeccCC
Q psy13969 166 VWSHNGLWMVTSDHQGYIKYWQSNMNN-VKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDF--YRCTEEKVLRGHG 242 (877)
Q Consensus 166 ~~spd~~~l~sg~~dg~v~iwd~~~~~-~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~--~~~~~~~~l~~h~ 242 (877)
+|++++.++++.+.+++|.+||..+.. +.++..+.. +.+++|+|++++|++++.|++|++||+ .+.+.+..+. +.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g 221 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IG 221 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CC
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cC
Confidence 378888899999999999999987654 455553333 899999999999999999999999999 7888888887 56
Q ss_pred CCeEEEEEcC----CCCEEEEEec-CCcccEEEEcCCCCceeEEeccC----------C-CCeeEEEEccCCC-eEEEEe
Q psy13969 243 ADVKCVDWHP----YKSLIVSGSK-DNQQPVKLWDPKAGQALATLHAH----------K-STVMDLAWNQNGN-WLVTAS 305 (877)
Q Consensus 243 ~~v~~v~~sp----~~~~l~sgs~-dg~~~I~iwd~~~~~~~~~~~~h----------~-~~V~~l~~sp~g~-~l~s~s 305 (877)
..+..++|+| ++++|++++. +++ |.+||..+.+++.++..+ . ..+.+|.+++++. ++++..
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~--v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQ--FAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSE--EEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCe--EEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 6789999999 9999998885 677 999999999988887642 2 3789999999765 556667
Q ss_pred CCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecC---cCCCCEEEEEEc
Q psy13969 306 RDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ---AHDNIIWTMAWH 382 (877)
Q Consensus 306 ~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~---~h~~~V~~v~~s 382 (877)
.++.|.+||+.+..........+...+..++|+|+++++++++..+++|.+||+.+++++..+.. .|......+ ++
T Consensus 300 ~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~ 378 (543)
T 1nir_A 300 ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VH 378 (543)
T ss_dssp TTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EE
T ss_pred CCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CC
Confidence 88999999998744333223346677889999999997777777789999999999998877742 255444444 46
Q ss_pred CC-CCEEEEEE-cCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccC------CCCeeeecCCCC
Q psy13969 383 PL-GHILATGS-NDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMG------LEDEDSVFPSSE 454 (877)
Q Consensus 383 p~-g~~l~sg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g------~d~~~~~~~~~~ 454 (877)
|+ +.+++++. .|++|.|||+...+...........+..+...+..+.+++++..|++++- .+..+.+|+..+
T Consensus 379 p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~ 458 (543)
T 1nir_A 379 PKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN 458 (543)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTC
T ss_pred CCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCC
Confidence 77 56667665 58999999997632211111122233333445678899999999999762 156899998875
Q ss_pred c
Q psy13969 455 P 455 (877)
Q Consensus 455 ~ 455 (877)
.
T Consensus 459 ~ 459 (543)
T 1nir_A 459 L 459 (543)
T ss_dssp T
T ss_pred C
Confidence 4
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=3.8e-21 Score=209.08 Aligned_cols=285 Identities=12% Similarity=0.110 Sum_probs=205.5
Q ss_pred EEEcCCCCE-EEEEeCCCeEEEEeCCCcce-EEEccCCCCeeEEEEcCCCCEEEEEEC-CCcEEEEeccCCee-eEEecc
Q psy13969 165 MVWSHNGLW-MVTSDHQGYIKYWQSNMNNV-KTFQGHKESIRGISFSPSDSKFATCSD-DGTVRVWDFYRCTE-EKVLRG 240 (877)
Q Consensus 165 l~~spd~~~-l~sg~~dg~v~iwd~~~~~~-~~~~~h~~~V~~i~~sp~~~~l~sgs~-Dg~I~iwd~~~~~~-~~~l~~ 240 (877)
+.|..+..+ +++...++.|.+||..+..+ ..+..+...+ +++|++++++|++++. ++.|.+||+.+.+. ...+..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 345565554 66788899999999876554 4555566667 9999999997777766 88999999998887 667776
Q ss_pred CCCCeEEEEEcCCCCEEEEEecCC---cccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEE-eCCCe-EEEEEc
Q psy13969 241 HGADVKCVDWHPYKSLIVSGSKDN---QQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTA-SRDHL-LKVFDI 315 (877)
Q Consensus 241 h~~~v~~v~~sp~~~~l~sgs~dg---~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~-s~Dg~-I~iwd~ 315 (877)
+...+.+++|+|++++|++...++ . |.+||+.+++.+..+.. .....+++|+|++++|+++ ..+.. |.+|++
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~--i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFN--MQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCE--EEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred CCCCccceEECCCCCEEEEecCCCCccc--EEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 666666699999999998554442 5 99999999988877754 4557999999999866655 55578 999998
Q ss_pred CCCCcce---EEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCce---eEEecCcCCCCEEEEEEcCCCCEEE
Q psy13969 316 RNLSSEV---QTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKE---VGCIPQAHDNIIWTMAWHPLGHILA 389 (877)
Q Consensus 316 ~~~~~~~---~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~---~~~~~~~h~~~V~~v~~sp~g~~l~ 389 (877)
....... .....+...+..++|+|+++.++++...++.|++||+.+.+. +..+. +...+..++|+|++++|+
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~ 236 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG--TNNLPGTIVVSRDGSTVY 236 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE--CSSCCCCEEECTTSSEEE
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc--CCCCCceEEECCCCCEEE
Confidence 7532221 122234556899999999987777777899999999998887 66662 346678999999999776
Q ss_pred EEE-cCCeEEEEeCCCCCCCcccccccC--CcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCCc
Q psy13969 390 TGS-NDHASKFWTRNRLGDPMRDRYNQK--GLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSEP 455 (877)
Q Consensus 390 sg~-~dg~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~~ 455 (877)
+++ .++.|.+||+.+............ ...........++|++|+.+++++...++.+.+|+....
T Consensus 237 v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 237 VLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp EECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred EEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 655 477899999875322101000000 000111112457899999999887777889999987654
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.89 E-value=5.9e-21 Score=214.87 Aligned_cols=222 Identities=16% Similarity=0.193 Sum_probs=181.3
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCCC---eEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEE-EEECCCc--EEEEecc
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQG---YIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFA-TCSDDGT--VRVWDFY 230 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~dg---~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~-sgs~Dg~--I~iwd~~ 230 (877)
.|...|.+++||||+++|++++.++ .|++||+.+.....+..|...+.+++|+||+++|+ +++.|+. |++||+.
T Consensus 176 ~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~ 255 (415)
T 2hqs_A 176 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA 255 (415)
T ss_dssp EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECC
Confidence 6889999999999999999998875 99999998888888888999999999999999888 5666654 9999998
Q ss_pred CCeeeEEeccCCCCeEEEEEcCCCCEEEEEec-CCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCC--
Q psy13969 231 RCTEEKVLRGHGADVKCVDWHPYKSLIVSGSK-DNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRD-- 307 (877)
Q Consensus 231 ~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~-dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~D-- 307 (877)
+++. ..+..|...+.+++|+|++++|++++. ++...|++||+.+++. ..+..|...+.+++|+|++++|++++.+
T Consensus 256 ~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g 333 (415)
T 2hqs_A 256 SGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGG 333 (415)
T ss_dssp TCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSS
T ss_pred CCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCC
Confidence 7765 567778889999999999999888876 4433488889988764 4556677889999999999999998865
Q ss_pred -CeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCC---cEEEEEcCCCceeEEecCcCCCCEEEEEEcC
Q psy13969 308 -HLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADG---SIMFWHVGADKEVGCIPQAHDNIIWTMAWHP 383 (877)
Q Consensus 308 -g~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg---~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp 383 (877)
..|++||+.+. . +..+..|. .+.+++|+|++. +|++++.++ .|++||+.. ..+..+ ..|...|.+++|+|
T Consensus 334 ~~~i~~~d~~~~-~-~~~l~~~~-~~~~~~~spdg~-~l~~~s~~~~~~~l~~~d~~g-~~~~~l-~~~~~~v~~~~~~~ 407 (415)
T 2hqs_A 334 QQHIAKQDLATG-G-VQVLSSTF-LDETPSLAPNGT-MVIYSSSQGMGSVLNLVSTDG-RFKARL-PATDGQVKFPAWSP 407 (415)
T ss_dssp CEEEEEEETTTC-C-EEECCCSS-SCEEEEECTTSS-EEEEEEEETTEEEEEEEETTS-CCEEEC-CCSSSEEEEEEECC
T ss_pred ceEEEEEECCCC-C-EEEecCCC-CcCCeEEcCCCC-EEEEEEcCCCccEEEEEECCC-CcEEEe-eCCCCCCcCCcccc
Confidence 58999999873 3 34555554 899999999998 455555555 799999874 445555 67889999999999
Q ss_pred CCC
Q psy13969 384 LGH 386 (877)
Q Consensus 384 ~g~ 386 (877)
..+
T Consensus 408 ~~~ 410 (415)
T 2hqs_A 408 YLH 410 (415)
T ss_dssp CCC
T ss_pred ccc
Confidence 754
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=6.5e-22 Score=240.30 Aligned_cols=281 Identities=10% Similarity=0.083 Sum_probs=208.8
Q ss_pred cCCEEEEEEcCCCCEEEEEeC-CC-----eEEEEeCCCcceEEEc-cCCC------------------------CeeEEE
Q psy13969 159 DCAVRHMVWSHNGLWMVTSDH-QG-----YIKYWQSNMNNVKTFQ-GHKE------------------------SIRGIS 207 (877)
Q Consensus 159 ~~~V~~l~~spd~~~l~sg~~-dg-----~v~iwd~~~~~~~~~~-~h~~------------------------~V~~i~ 207 (877)
...|++++||||+++|++++. ++ .|++||+.+.....+. .|.. .|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 346889999999999999888 88 9999998876654433 3322 388999
Q ss_pred EcCCCCEEEEEECCCcEEEEeccCCe--eeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccC
Q psy13969 208 FSPSDSKFATCSDDGTVRVWDFYRCT--EEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAH 285 (877)
Q Consensus 208 ~sp~~~~l~sgs~Dg~I~iwd~~~~~--~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h 285 (877)
||||+++|++++. +.|++||+.++. .+..+..|...+.+++|+||+++|++++. +. |++||+.+++.......+
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~--i~~~d~~~g~~~~~~~~~ 191 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RN--LWVIDLASGRQMQLTADG 191 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TE--EEEEETTTTEEEECCCCC
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-Cc--EEEEecCCCCEEEeccCC
Confidence 9999999999986 899999998773 45566778888999999999999998875 45 999999988766544444
Q ss_pred CCC----------------eeEEEEccCCCeEEEEeCCC---------------------------------eEEEEEcC
Q psy13969 286 KST----------------VMDLAWNQNGNWLVTASRDH---------------------------------LLKVFDIR 316 (877)
Q Consensus 286 ~~~----------------V~~l~~sp~g~~l~s~s~Dg---------------------------------~I~iwd~~ 316 (877)
... +.+++||||+++|++++.|. .|++||+.
T Consensus 192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 271 (741)
T 2ecf_A 192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA 271 (741)
T ss_dssp CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence 332 47899999999999998775 78899987
Q ss_pred C-CCcceEEEe--cCCCCeEEEEEcCCCCcEEEEEe----CCCcEEEEEcCCCceeEEecCcCC-C---CEEEEEEcCCC
Q psy13969 317 N-LSSEVQTFR--GHKKEASAVAWHPQHEGLFSSGG----ADGSIMFWHVGADKEVGCIPQAHD-N---IIWTMAWHPLG 385 (877)
Q Consensus 317 ~-~~~~~~~~~--~h~~~v~~i~~~p~~~~~l~sgs----~dg~I~iwd~~~~~~~~~~~~~h~-~---~V~~v~~sp~g 385 (877)
+ .. ...... .|...+.+++| |+++.++++.. .+..|++||+.+++....+. .+. . .+.+++|+||+
T Consensus 272 ~~~~-~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~spdg 348 (741)
T 2ecf_A 272 EQAQ-TQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAH-ETSPTWVPLHNSLRFLDDG 348 (741)
T ss_dssp TTCC-CEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEE-EECSSCCCCCSCCEECTTS
T ss_pred CCCc-eEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEE-cCCCCcCCcCCceEECCCC
Confidence 6 43 222222 47778999999 99996555443 35689999999988766552 332 2 45689999999
Q ss_pred CEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeee-eccCCCCeEEeccCCCC--eeeecCCC
Q psy13969 386 HILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNE-EMELNDSAVIPGMGLED--EDSVFPSS 453 (877)
Q Consensus 386 ~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~d~~~l~~~~g~d~--~~~~~~~~ 453 (877)
++|++++.|+.++||.++..+. ... +..+...+..+ .|++++..++.....+. .+++|...
T Consensus 349 ~~~~~~~~~g~~~l~~~~~~~~-~~~------l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 349 SILWSSERTGFQHLYRIDSKGK-AAA------LTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp CEEEEECTTSSCEEEEECSSSC-EEE------SCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred eEEEEecCCCccEEEEEcCCCC-eee------eeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 9999999999888888764332 211 22223335555 58999988876655444 66777643
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=2.3e-21 Score=235.54 Aligned_cols=277 Identities=10% Similarity=0.121 Sum_probs=209.0
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEeCCCc---ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEe
Q psy13969 162 VRHMVWSHNGLWMVTSDHQGYIKYWQSNMN---NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVL 238 (877)
Q Consensus 162 V~~l~~spd~~~l~sg~~dg~v~iwd~~~~---~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l 238 (877)
|.+++||||+++|++++. +.|++||+.+. .+..+..|...+.+++||||+++|++++. +.|++||+.+++.....
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLT 188 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECC
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEec
Confidence 789999999999998886 99999999887 77888889899999999999999999885 59999999887766555
Q ss_pred ccCCCC----------------eEEEEEcCCCCEEEEEecCCc-------------------------------ccEEEE
Q psy13969 239 RGHGAD----------------VKCVDWHPYKSLIVSGSKDNQ-------------------------------QPVKLW 271 (877)
Q Consensus 239 ~~h~~~----------------v~~v~~sp~~~~l~sgs~dg~-------------------------------~~I~iw 271 (877)
..+... +.+++|+||+++|++++.|+. ..|++|
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 444332 478999999999999887650 138999
Q ss_pred cCCC-CceeEEec--cCCCCeeEEEEccCCCeEEEEeC-----CCeEEEEEcCCCCcceEEEecCCC----CeEEEEEcC
Q psy13969 272 DPKA-GQALATLH--AHKSTVMDLAWNQNGNWLVTASR-----DHLLKVFDIRNLSSEVQTFRGHKK----EASAVAWHP 339 (877)
Q Consensus 272 d~~~-~~~~~~~~--~h~~~V~~l~~sp~g~~l~s~s~-----Dg~I~iwd~~~~~~~~~~~~~h~~----~v~~i~~~p 339 (877)
|+.+ ++...... .|...+.+++| ||+++|++++. +..|++||+.+ ......+..+.. .+.+++|+|
T Consensus 269 d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~sp 346 (741)
T 2ecf_A 269 SPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS-NQQRVLAHETSPTWVPLHNSLRFLD 346 (741)
T ss_dssp CSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT-CCEEEEEEEECSSCCCCCSCCEECT
T ss_pred ECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC-CceEEEEEcCCCCcCCcCCceEECC
Confidence 9988 77654443 47788999999 99999998764 56799999987 444455544443 456899999
Q ss_pred CCCcEEEEEeCCCcEEEEEcC-CCceeEEecCcCCCCEEEE-EEcCCCCEEEE-EEcCC--eEEEEeCCCCCCCcccccc
Q psy13969 340 QHEGLFSSGGADGSIMFWHVG-ADKEVGCIPQAHDNIIWTM-AWHPLGHILAT-GSNDH--ASKFWTRNRLGDPMRDRYN 414 (877)
Q Consensus 340 ~~~~~l~sgs~dg~I~iwd~~-~~~~~~~~~~~h~~~V~~v-~~sp~g~~l~s-g~~dg--~v~iwd~~~~~~~~~~~~~ 414 (877)
+++ ++++++.|+.++||.+. .+. +..+ ..|...|.++ +|+++++.|+. ++.++ .++||+++..+.....
T Consensus 347 dg~-~~~~~~~~g~~~l~~~~~~~~-~~~l-~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~--- 420 (741)
T 2ecf_A 347 DGS-ILWSSERTGFQHLYRIDSKGK-AAAL-THGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQR--- 420 (741)
T ss_dssp TSC-EEEEECTTSSCEEEEECSSSC-EEES-CCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEE---
T ss_pred CCe-EEEEecCCCccEEEEEcCCCC-eeee-eecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeee---
Confidence 998 88888999988888775 333 5455 5677788887 59999987654 44455 8999998653332221
Q ss_pred cCCcceeeeeeeeeeccCCCCeEEeccCCC---CeeeecCC
Q psy13969 415 QKGLAHCITGVYNEEMELNDSAVIPGMGLE---DEDSVFPS 452 (877)
Q Consensus 415 ~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d---~~~~~~~~ 452 (877)
+.. ...+..+.|++|+..++...... ..+.+++.
T Consensus 421 ---l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~ 457 (741)
T 2ecf_A 421 ---LSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRA 457 (741)
T ss_dssp ---CCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEET
T ss_pred ---ccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEc
Confidence 111 33467889999999988765433 24455543
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=1.3e-20 Score=206.49 Aligned_cols=270 Identities=7% Similarity=0.016 Sum_probs=208.9
Q ss_pred ccCCEEEEEEcCCCCEEEEEeC-------CCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEE-CCCcEEEEec
Q psy13969 158 HDCAVRHMVWSHNGLWMVTSDH-------QGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCS-DDGTVRVWDF 229 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l~sg~~-------dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs-~Dg~I~iwd~ 229 (877)
....+..++|++++++|++++. ++.|.+||..+..+.....+...+.+++|++++++|++++ .++.|.+||+
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 4566889999999988887764 5689999987765544434445578999999999665554 4799999999
Q ss_pred cCCeeeEEeccCCCC---------eEEEEEcCCCCEEEEEec--CCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCC
Q psy13969 230 YRCTEEKVLRGHGAD---------VKCVDWHPYKSLIVSGSK--DNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNG 298 (877)
Q Consensus 230 ~~~~~~~~l~~h~~~---------v~~v~~sp~~~~l~sgs~--dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g 298 (877)
.+++.+..+..+... +.+++|++++++|++++. ++. |.+||+.+++.+..+..+...+.+++|++++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESV--IWVVDGGNIKLKTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCE--EEEEETTTTEEEEEECCCCTTCCCCEEETTT
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCce--EEEEcCCCCceEEEecCCCCccceEEECCCC
Confidence 999888877754422 789999999998887763 566 9999999999888887666778999999999
Q ss_pred CeEEEEeCCCeEEEEEcCCCCcceEEEec----CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCC
Q psy13969 299 NWLVTASRDHLLKVFDIRNLSSEVQTFRG----HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDN 374 (877)
Q Consensus 299 ~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~----h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~ 374 (877)
++|++++.++.|.+||+.+ ...+..+.. +...+..++|+|++..++++...++.|.+||+.+.+.+..+....
T Consensus 197 ~~l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-- 273 (353)
T 3vgz_A 197 KRLYTTNADGELITIDTAD-NKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE-- 273 (353)
T ss_dssp TEEEEECTTSEEEEEETTT-TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--
T ss_pred CEEEEEcCCCeEEEEECCC-CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--
Confidence 9999999999999999987 455555543 455688899999999777776667999999999998887774322
Q ss_pred CEEEEEEcCCCCEEEEEE-cCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEecc
Q psy13969 375 IIWTMAWHPLGHILATGS-NDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGM 441 (877)
Q Consensus 375 ~V~~v~~sp~g~~l~sg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~ 441 (877)
..+++|++++++|++++ .++.|.+||+.+.... . .. ........++|++++.+++++.
T Consensus 274 -~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~-~-~~------~~~~~~~~~~~s~dg~~l~v~~ 332 (353)
T 3vgz_A 274 -SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVV-K-TF------DTPTHPNSLALSADGKTLYVSV 332 (353)
T ss_dssp -CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEE-E-EE------ECCSEEEEEEECTTSCEEEEEE
T ss_pred -CceEEECCCCCEEEEEECCCCeEEEEECCCCeEE-E-EE------ecCCCCCeEEEcCCCCEEEEEE
Confidence 25699999998666665 6899999998653211 1 11 1123467888999998777754
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.88 E-value=2.9e-21 Score=233.85 Aligned_cols=277 Identities=9% Similarity=0.067 Sum_probs=197.2
Q ss_pred CEEEEEEcCCCCEEEEEeCC---------CeEEEEeCCCcceEEEc---cCCCCeeEEEEcCCCCEEEEEECCCcEEEEe
Q psy13969 161 AVRHMVWSHNGLWMVTSDHQ---------GYIKYWQSNMNNVKTFQ---GHKESIRGISFSPSDSKFATCSDDGTVRVWD 228 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~~d---------g~v~iwd~~~~~~~~~~---~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd 228 (877)
.|.+++||||+++|++++.+ +.|++||+++.....+. .|...|.+++||||+++||+++. +.|++||
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~ 140 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCA 140 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEES
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEE
Confidence 48999999999999998764 78899998877665554 34455899999999999999986 7999999
Q ss_pred ccCCeeeEEeccCCCCe------------------EEEEEcCCCCEEEEEecCC--------------------------
Q psy13969 229 FYRCTEEKVLRGHGADV------------------KCVDWHPYKSLIVSGSKDN-------------------------- 264 (877)
Q Consensus 229 ~~~~~~~~~l~~h~~~v------------------~~v~~sp~~~~l~sgs~dg-------------------------- 264 (877)
+.+++.......+...+ .+++|+||+++|++++.+.
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK 220 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCC
Confidence 98887766665544333 7899999999999887653
Q ss_pred ------cccEEEEcCCCCceeEEeccC------CCCeeEEEEccCCCeEEEEeC----CCeEEEEEcCCCCcceEEEec-
Q psy13969 265 ------QQPVKLWDPKAGQALATLHAH------KSTVMDLAWNQNGNWLVTASR----DHLLKVFDIRNLSSEVQTFRG- 327 (877)
Q Consensus 265 ------~~~I~iwd~~~~~~~~~~~~h------~~~V~~l~~sp~g~~l~s~s~----Dg~I~iwd~~~~~~~~~~~~~- 327 (877)
...|++||+.+++....+..+ ...|.+++||||+++|++.+. +..|++||+.+. .....+..
T Consensus 221 ~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g-~~~~~~~~~ 299 (723)
T 1xfd_A 221 AGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG-VCTKKHEDE 299 (723)
T ss_dssp TTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC-CEEEEEEEE
T ss_pred CCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC-cceEEEEec
Confidence 113999999988866666654 567999999999998877653 357999999873 44444333
Q ss_pred CCCCeE----EEEEcCCCCcEEEE-EeCCC------cEEEEEc-CCCc--eeEEecCcCCCCEEE-EEEcCCCCEEEEEE
Q psy13969 328 HKKEAS----AVAWHPQHEGLFSS-GGADG------SIMFWHV-GADK--EVGCIPQAHDNIIWT-MAWHPLGHILATGS 392 (877)
Q Consensus 328 h~~~v~----~i~~~p~~~~~l~s-gs~dg------~I~iwd~-~~~~--~~~~~~~~h~~~V~~-v~~sp~g~~l~sg~ 392 (877)
+...+. .++|+|+++.++++ ...++ .|++||+ .... +...+ ..+...+.. ++|+||++.|+..+
T Consensus 300 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l-~~~~~~~~~~~~~spdg~~l~~~~ 378 (723)
T 1xfd_A 300 SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSI-TSGDWDVTKILAYDEKGNKIYFLS 378 (723)
T ss_dssp CSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBS-CCSSSCEEEEEEEETTTTEEEEEE
T ss_pred cCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEe-ecCCeEEEeeeEEcCCCCEEEEEE
Confidence 344443 78999999977665 56677 5667773 3333 14444 233344554 69999999987766
Q ss_pred cC---CeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccC
Q psy13969 393 ND---HASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMG 442 (877)
Q Consensus 393 ~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g 442 (877)
.+ +.++||+++..+....... .....+...+..+.|++|+..++....
T Consensus 379 ~~~~~~~~~l~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 379 TEDLPRRRQLYSANTVGNFNRQCL--SCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp SSSCTTCCEEEEECSSTTCCCBCS--STTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred cCCCCcceEEEEEeCCCCCCccee--cccccCCCCeEEEEECCCCCEEEEEcc
Confidence 65 7899999875432111100 000002334678889999998877543
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=1.2e-20 Score=205.59 Aligned_cols=273 Identities=10% Similarity=0.098 Sum_probs=194.2
Q ss_pred EEEEEeCCCeEEEEeCCC-c--ceEEEccCCCCeeEEEEcCCCCEEEEEECC-CcEEEEecc--CCe--eeEEeccCCCC
Q psy13969 173 WMVTSDHQGYIKYWQSNM-N--NVKTFQGHKESIRGISFSPSDSKFATCSDD-GTVRVWDFY--RCT--EEKVLRGHGAD 244 (877)
Q Consensus 173 ~l~sg~~dg~v~iwd~~~-~--~~~~~~~h~~~V~~i~~sp~~~~l~sgs~D-g~I~iwd~~--~~~--~~~~l~~h~~~ 244 (877)
++++.+.++.|++|+++. . .......|...+.+++|++++++|++++.+ +.|.+|++. +++ .+..+..+. .
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~ 85 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-S 85 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-C
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-C
Confidence 344557899999999752 2 223334577889999999999999998886 999999997 443 334454444 7
Q ss_pred eEEEEEcCCCCEEEEEec-CCcccEEEEcCC---CCceeEEeccCCCCeeEEEEccCCCeEEEEe-CCCeEEEEEcCCCC
Q psy13969 245 VKCVDWHPYKSLIVSGSK-DNQQPVKLWDPK---AGQALATLHAHKSTVMDLAWNQNGNWLVTAS-RDHLLKVFDIRNLS 319 (877)
Q Consensus 245 v~~v~~sp~~~~l~sgs~-dg~~~I~iwd~~---~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s-~Dg~I~iwd~~~~~ 319 (877)
+.+++|++++++|++++. ++. |.+||+. +.+.+..+.. ...+.+++|++++++|++++ .++.|++||+....
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~--i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 162 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGN--VSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG 162 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTE--EEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred CcEEEEcCCCCEEEEEecCCCe--EEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCC
Confidence 899999999998877765 666 9999994 4444555543 34689999999999888887 89999999998622
Q ss_pred cceE----EEec-CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCC--Cce--eEEe---cCcC--CCCEEEEEEcCCC
Q psy13969 320 SEVQ----TFRG-HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGA--DKE--VGCI---PQAH--DNIIWTMAWHPLG 385 (877)
Q Consensus 320 ~~~~----~~~~-h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~--~~~--~~~~---~~~h--~~~V~~v~~sp~g 385 (877)
.... .+.. ....+.+++|+|++..++++...++.|.+||+.. +.. +..+ ...+ ...+.+++|++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg 242 (343)
T 1ri6_A 163 HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDG 242 (343)
T ss_dssp CEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTS
T ss_pred ceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCC
Confidence 2221 2222 3457889999999986767777899999999954 322 2222 1111 3467789999999
Q ss_pred CEEEEEE-cCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCC
Q psy13969 386 HILATGS-NDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSS 453 (877)
Q Consensus 386 ~~l~sg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~ 453 (877)
++|+++. .++.|.+|++........... .+.. ...+..++|++++..++++...++.+.+|...
T Consensus 243 ~~l~v~~~~~~~i~v~d~~~~~~~~~~~~---~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 243 RHLYACDRTASLITVFSVSEDGSVLSKEG---FQPT-ETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCCEEEEE---EEEC-SSSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CEEEEEecCCCEEEEEEEcCCCCceEEee---eecC-CCccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 8777554 789999999974222211111 0111 12267889999999999887778999999554
No 138
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=8.4e-21 Score=201.58 Aligned_cols=234 Identities=12% Similarity=0.159 Sum_probs=179.6
Q ss_pred eeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-cceEEEc-cC-CCCeeEEEEcCCCCEEEEEEC--CCcEEEEec-
Q psy13969 156 LAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQ-GH-KESIRGISFSPSDSKFATCSD--DGTVRVWDF- 229 (877)
Q Consensus 156 l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~-~~~~~~~-~h-~~~V~~i~~sp~~~~l~sgs~--Dg~I~iwd~- 229 (877)
+.|...|.+++|+||+++|++++ ++.|++||+.. .....+. .| ...|.+++|+|++++|++++. ++.+.||.+
T Consensus 38 ~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~ 116 (297)
T 2ojh_A 38 WQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLP 116 (297)
T ss_dssp EEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEE
T ss_pred ccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEE
Confidence 35788999999999999999886 78999999887 6554443 44 378899999999999999993 345555554
Q ss_pred -cCCeeeEEeccCCCCeEEEEEcCCCCEEE-EEecCCcccEEEEcCCC-CceeEEeccCCCCeeEEEEccCCCeEEEEe-
Q psy13969 230 -YRCTEEKVLRGHGADVKCVDWHPYKSLIV-SGSKDNQQPVKLWDPKA-GQALATLHAHKSTVMDLAWNQNGNWLVTAS- 305 (877)
Q Consensus 230 -~~~~~~~~l~~h~~~v~~v~~sp~~~~l~-sgs~dg~~~I~iwd~~~-~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s- 305 (877)
.+.. ...+..+ ..+.+++|+|++++|+ +++.++. +.||++.. ......+..|...+.+++|+|++++|++++
T Consensus 117 ~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 192 (297)
T 2ojh_A 117 STGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQV--FDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSS 192 (297)
T ss_dssp TTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTE--EEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEEC
T ss_pred CCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCc--eEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEec
Confidence 4433 4444433 3489999999999777 7778887 88887532 234566777888999999999999888776
Q ss_pred CCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCC-----------CcEEEEEcCCCceeEEe-cCcCC
Q psy13969 306 RDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGAD-----------GSIMFWHVGADKEVGCI-PQAHD 373 (877)
Q Consensus 306 ~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~d-----------g~I~iwd~~~~~~~~~~-~~~h~ 373 (877)
.++.++||++......+..+..|...+.+++|+|++.. |++++.+ ..|++||+.+.+..... ...|.
T Consensus 193 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 271 (297)
T 2ojh_A 193 RTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDK-VVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQ 271 (297)
T ss_dssp TTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSE-EEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEEST
T ss_pred CCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCE-EEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCC
Confidence 58999999987445667778888888999999999985 4444443 56999999887653322 13677
Q ss_pred CCEEEEEEcCCCCEEEEEEcCC
Q psy13969 374 NIIWTMAWHPLGHILATGSNDH 395 (877)
Q Consensus 374 ~~V~~v~~sp~g~~l~sg~~dg 395 (877)
..|.+++|+|++++|++++.+.
T Consensus 272 ~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 272 GTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTSCSCCBCTTSSEEEEEEECC
T ss_pred cccccceECCCCCEEEEEEecc
Confidence 8899999999999988887664
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.87 E-value=4.7e-20 Score=200.90 Aligned_cols=242 Identities=13% Similarity=0.138 Sum_probs=179.5
Q ss_pred eccCCEEEEEEcCCCCEEEEEeCC-CeEEEEeCC--Ccce---EEEccCCCCeeEEEEcCCCCEEEEEEC-CCcEEEEec
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTSDHQ-GYIKYWQSN--MNNV---KTFQGHKESIRGISFSPSDSKFATCSD-DGTVRVWDF 229 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg~~d-g~v~iwd~~--~~~~---~~~~~h~~~V~~i~~sp~~~~l~sgs~-Dg~I~iwd~ 229 (877)
.|...+.+++|++++++|++++.+ +.|.+|+++ .... ..+..+. .+.+++|++++++|++++. ++.|.+||+
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 467788999999999988888876 999999976 4333 2344334 7899999999998877765 889999999
Q ss_pred ---cCCeeeEEeccCCCCeEEEEEcCCCCEEEEEe-cCCcccEEEEcCCC-CceeE----Eecc-CCCCeeEEEEccCCC
Q psy13969 230 ---YRCTEEKVLRGHGADVKCVDWHPYKSLIVSGS-KDNQQPVKLWDPKA-GQALA----TLHA-HKSTVMDLAWNQNGN 299 (877)
Q Consensus 230 ---~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs-~dg~~~I~iwd~~~-~~~~~----~~~~-h~~~V~~l~~sp~g~ 299 (877)
.+.+.+..+.. ...+.+++|++++++|++++ .++. |++||+.+ ++... .+.. ....+.+++|+|+++
T Consensus 114 ~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~--v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 114 EDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDR--ICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp ETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTE--EEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred CCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCE--EEEEEecCCCceeeecccccccCCCCCcceEEECCCCC
Confidence 44444555543 34689999999999888877 7777 99999987 54332 2222 345788999999999
Q ss_pred eEEEEe-CCCeEEEEEcCCCCcc---eEEEec---C---CCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCC----Ccee
Q psy13969 300 WLVTAS-RDHLLKVFDIRNLSSE---VQTFRG---H---KKEASAVAWHPQHEGLFSSGGADGSIMFWHVGA----DKEV 365 (877)
Q Consensus 300 ~l~s~s-~Dg~I~iwd~~~~~~~---~~~~~~---h---~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~----~~~~ 365 (877)
+|++++ .++.|++||+...... +..+.. . ...+.+++|+|++..++++...++.|.+||+.. .+.+
T Consensus 191 ~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 191 YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEE
T ss_pred EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEe
Confidence 776655 7899999999642111 222221 1 235678999999987777777899999999982 2334
Q ss_pred EEecCcCCCCEEEEEEcCCCCEEEEEE-cCCeEEEEeCCC
Q psy13969 366 GCIPQAHDNIIWTMAWHPLGHILATGS-NDHASKFWTRNR 404 (877)
Q Consensus 366 ~~~~~~h~~~V~~v~~sp~g~~l~sg~-~dg~v~iwd~~~ 404 (877)
..+ ..+. .+.+++|++++++|++++ .++.|.+|+++.
T Consensus 271 ~~~-~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 271 GFQ-PTET-QPRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp EEE-ECSS-SCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred eee-cCCC-ccceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 344 2233 388999999999888887 689999997753
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.87 E-value=1.5e-20 Score=227.02 Aligned_cols=282 Identities=14% Similarity=0.132 Sum_probs=207.2
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccC-----Cee
Q psy13969 160 CAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYR-----CTE 234 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~-----~~~ 234 (877)
..|.+++|||| .+|+++. ++.|++||+.+..+..+..+...+.+++||||+++|+++ .|+.|++||+.+ ++.
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~ 158 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA 158 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc
Confidence 56899999999 6666553 599999999888888888888889999999999999985 579999999988 766
Q ss_pred eEEeccCCCC--------------eEEEEEcCCCCEEEEEecC-------------------------------CcccEE
Q psy13969 235 EKVLRGHGAD--------------VKCVDWHPYKSLIVSGSKD-------------------------------NQQPVK 269 (877)
Q Consensus 235 ~~~l~~h~~~--------------v~~v~~sp~~~~l~sgs~d-------------------------------g~~~I~ 269 (877)
......+... +.+++|+||+++|++++.| ....|+
T Consensus 159 ~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 238 (706)
T 2z3z_A 159 IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVG 238 (706)
T ss_dssp EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEE
T ss_pred EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEE
Confidence 5544433332 4899999999999998732 223499
Q ss_pred EEcCCCCceeEEec--cCCCCeeEEEEccCCCeEEEEeCCC-----eEEEEEcCCCCcceEEEe-cCCC---CeEEEEEc
Q psy13969 270 LWDPKAGQALATLH--AHKSTVMDLAWNQNGNWLVTASRDH-----LLKVFDIRNLSSEVQTFR-GHKK---EASAVAWH 338 (877)
Q Consensus 270 iwd~~~~~~~~~~~--~h~~~V~~l~~sp~g~~l~s~s~Dg-----~I~iwd~~~~~~~~~~~~-~h~~---~v~~i~~~ 338 (877)
+||+.+++...... .|...|.+++|+||+++|++++.|. .|++||+.+.......+. .+.. .+.+++|+
T Consensus 239 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~s 318 (706)
T 2z3z_A 239 IYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFL 318 (706)
T ss_dssp EEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEEC
T ss_pred EEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceee
Confidence 99999887554432 4667899999999999999988776 899999987423222222 2222 24678999
Q ss_pred C--CCCcEEEEEeCCCcEEEEEcC-CCceeEEecCcCCCCEEE-EEEcCCCCEEEEEEcC-C----eEEEEeCCCCCCCc
Q psy13969 339 P--QHEGLFSSGGADGSIMFWHVG-ADKEVGCIPQAHDNIIWT-MAWHPLGHILATGSND-H----ASKFWTRNRLGDPM 409 (877)
Q Consensus 339 p--~~~~~l~sgs~dg~I~iwd~~-~~~~~~~~~~~h~~~V~~-v~~sp~g~~l~sg~~d-g----~v~iwd~~~~~~~~ 409 (877)
| ++. ++++++.|+.++||++. ....+..+ ..|...|.+ ++|+++++.|+.++.+ + .|..||+... ..
T Consensus 319 p~~dg~-~l~~~~~~g~~~l~~~~~~~~~~~~l-~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~--~~ 394 (706)
T 2z3z_A 319 PGSNNQ-FIWQSRRDGWNHLYLYDTTGRLIRQV-TKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG--KT 394 (706)
T ss_dssp TTCSSE-EEEEECTTSSCEEEEEETTSCEEEEC-CCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC--CC
T ss_pred cCCCCE-EEEEEccCCccEEEEEECCCCEEEec-CCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC--Cc
Confidence 9 887 78888899999999886 55556666 567777877 7999999877666554 3 4555565432 11
Q ss_pred ccccccCCcceeeeeeeeeeccCCCCeEEeccCCC---CeeeecCCCCc
Q psy13969 410 RDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLE---DEDSVFPSSEP 455 (877)
Q Consensus 410 ~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d---~~~~~~~~~~~ 455 (877)
.. + .+...+.++.|++|+.+++...... ..+++|+....
T Consensus 395 ~~------l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 395 KD------L-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp EE------S-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred ee------c-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 11 1 1233467889999999888764333 46888876543
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=3.2e-21 Score=233.49 Aligned_cols=279 Identities=10% Similarity=0.108 Sum_probs=196.5
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceE-EEccCCC---CeeEEEEcCCCCEEEEEECC---------CcEEEEe
Q psy13969 162 VRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVK-TFQGHKE---SIRGISFSPSDSKFATCSDD---------GTVRVWD 228 (877)
Q Consensus 162 V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~-~~~~h~~---~V~~i~~sp~~~~l~sgs~D---------g~I~iwd 228 (877)
+.+++|+||++++++ +.|++|++||+.+.... .+..|.. .|.+++||||+++|++++.+ +.|++||
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d 97 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSK 97 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEE
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEE
Confidence 456677888886665 68899999998776544 4445544 49999999999999999875 7888999
Q ss_pred ccCCeeeEEec---cCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCe----------------
Q psy13969 229 FYRCTEEKVLR---GHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTV---------------- 289 (877)
Q Consensus 229 ~~~~~~~~~l~---~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V---------------- 289 (877)
+.+++. ..+. .|...+.+++||||+++||+++. +. |++||+.+++.......+...+
T Consensus 98 ~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~--i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 98 IPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NN--IYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp SSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TE--EEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred CCCCce-EeccCCccccccccccEECCCCCEEEEEEC-Ce--EEEEECCCCceEEEecCCCCCceECcccceeEEEEecc
Confidence 988765 3333 34445899999999999999886 55 9999999988776665544433
Q ss_pred --eEEEEccCCCeEEEEeCCC----------------------------------eEEEEEcCCCCcceEEEecC-----
Q psy13969 290 --MDLAWNQNGNWLVTASRDH----------------------------------LLKVFDIRNLSSEVQTFRGH----- 328 (877)
Q Consensus 290 --~~l~~sp~g~~l~s~s~Dg----------------------------------~I~iwd~~~~~~~~~~~~~h----- 328 (877)
.+++||||+++|++++.|. .|++||+.+ ......+..+
T Consensus 174 ~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~-~~~~~~l~~~~~~~~ 252 (723)
T 1xfd_A 174 THIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNG-PTHDLEMMPPDDPRM 252 (723)
T ss_dssp SSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSS-SCCCEECCCCCCGGG
T ss_pred CcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCC-CceeEEeeCCccCCC
Confidence 7899999999999988653 799999987 3334455543
Q ss_pred -CCCeEEEEEcCCCCcEEEEEeC----CCcEEEEEcCCCceeEEecCcCCCCEE----EEEEcCCCCEEEE--EEcCC--
Q psy13969 329 -KKEASAVAWHPQHEGLFSSGGA----DGSIMFWHVGADKEVGCIPQAHDNIIW----TMAWHPLGHILAT--GSNDH-- 395 (877)
Q Consensus 329 -~~~v~~i~~~p~~~~~l~sgs~----dg~I~iwd~~~~~~~~~~~~~h~~~V~----~v~~sp~g~~l~s--g~~dg-- 395 (877)
...+.+++|+|+++ +|++.+. +..|++||+.+++....+...+...+. +++|+||++.|+. ...++
T Consensus 253 ~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 331 (723)
T 1xfd_A 253 REYYITMVKWATSTK-VAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGR 331 (723)
T ss_dssp SSEEEEEEEESSSSE-EEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSS
T ss_pred ccceeEEEEEeCCCe-EEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCC
Confidence 56789999999998 5544432 357999999988766555333444443 7899999986664 45666
Q ss_pred ----eEEEEeCCCCCCC--cccccccCCcce-eeeeeeeeeccCCCCeEEeccCCC--CeeeecCCC
Q psy13969 396 ----ASKFWTRNRLGDP--MRDRYNQKGLAH-CITGVYNEEMELNDSAVIPGMGLE--DEDSVFPSS 453 (877)
Q Consensus 396 ----~v~iwd~~~~~~~--~~~~~~~~~~~~-~~~~v~~~~~~~d~~~l~~~~g~d--~~~~~~~~~ 453 (877)
.|.+||+...+.. ... +.. .......+.|++|+..|+.....+ ..+.+|...
T Consensus 332 ~~~~~l~~~d~~~~~~~~~~~~------l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 332 GKFYHITVSSSQPNSSNDNIQS------ITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp SCEEEEEEECSSCCSSSCCCCB------SCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred cceeEEEEEeccCCCCccceeE------eecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 4556662122220 111 111 111122368999999998765554 667788654
No 142
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.86 E-value=2.7e-19 Score=196.01 Aligned_cols=258 Identities=15% Similarity=0.197 Sum_probs=182.2
Q ss_pred CeEEEEEccCC-ce-----eeccCCEEEEEEcCCCCEEEEEeC---CCeEEEEeCCCcce---EEEccCCCCeeEEEEcC
Q psy13969 143 PIFSMTWTPEG-RR-----LAHDCAVRHMVWSHNGLWMVTSDH---QGYIKYWQSNMNNV---KTFQGHKESIRGISFSP 210 (877)
Q Consensus 143 ~i~~~~~sp~g-~~-----l~h~~~V~~l~~spd~~~l~sg~~---dg~v~iwd~~~~~~---~~~~~h~~~V~~i~~sp 210 (877)
.|+.+.|..+. ++ +.+...+..++|+||++ |++++. ++.|++|+++.... ..+..+...+..|+|++
T Consensus 17 ~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~sp 95 (347)
T 3hfq_A 17 GIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDE 95 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEET
T ss_pred CEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECC
Confidence 35555555532 21 24567788899999999 554443 68999999865543 33345778899999999
Q ss_pred CCCEEEEEE-CCCcEEEEeccC---CeeeEEecc---------CCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCC-CC
Q psy13969 211 SDSKFATCS-DDGTVRVWDFYR---CTEEKVLRG---------HGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPK-AG 276 (877)
Q Consensus 211 ~~~~l~sgs-~Dg~I~iwd~~~---~~~~~~l~~---------h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~-~~ 276 (877)
++++|++++ .+++|.+||+.. ...+..+.. +...+.+++|+|+++++++...++. |++||+. ++
T Consensus 96 dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~--v~~~~~~~~g 173 (347)
T 3hfq_A 96 ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDK--VYVYNVSDAG 173 (347)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTE--EEEEEECTTS
T ss_pred CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCE--EEEEEECCCC
Confidence 999998888 679999999963 223333322 1234889999999996666556776 9999998 45
Q ss_pred ceeE--Eecc-CCCCeeEEEEccCCCeEEEE-eCCCeEEEEEcCCC-Cc--ceEEEecCC------CCeEEEEEcCCCCc
Q psy13969 277 QALA--TLHA-HKSTVMDLAWNQNGNWLVTA-SRDHLLKVFDIRNL-SS--EVQTFRGHK------KEASAVAWHPQHEG 343 (877)
Q Consensus 277 ~~~~--~~~~-h~~~V~~l~~sp~g~~l~s~-s~Dg~I~iwd~~~~-~~--~~~~~~~h~------~~v~~i~~~p~~~~ 343 (877)
+... .+.. ....+..++|+|++++|+++ ..++.|++|++... .. .+..+.... ..+..++|+|+++.
T Consensus 174 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~ 253 (347)
T 3hfq_A 174 QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHF 253 (347)
T ss_dssp CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCE
T ss_pred cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCE
Confidence 4322 2222 23367889999999966664 56889999998742 12 122333222 34888999999997
Q ss_pred EEEEEeCCCcEEEEEcCCC---ceeEEecCcCCCCEEEEEEcCCCCEEEEEEcC-CeEEEEeCCC
Q psy13969 344 LFSSGGADGSIMFWHVGAD---KEVGCIPQAHDNIIWTMAWHPLGHILATGSND-HASKFWTRNR 404 (877)
Q Consensus 344 ~l~sgs~dg~I~iwd~~~~---~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~d-g~v~iwd~~~ 404 (877)
++++...++.|.+|++... ..+..+ ..+...+.+++|+|++++|++++.+ +.|.+|+++.
T Consensus 254 l~v~~~~~~~v~v~~~~~~g~~~~~~~~-~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 254 LYVSNRGYNTLAVFAVTADGHLTLIQQI-STEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp EEEEEETTTEEEEEEECGGGCEEEEEEE-ECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEEEeCCCCEEEEEEECCCCcEEEeEEE-ecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 7788888999999999732 334444 3455668899999999988888765 8999997754
No 143
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=4.1e-20 Score=223.15 Aligned_cols=244 Identities=11% Similarity=0.152 Sum_probs=186.5
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-----cceEEEc-cCCCC--------------eeEEEEcCCCCEEEE
Q psy13969 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-----NNVKTFQ-GHKES--------------IRGISFSPSDSKFAT 217 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~-----~~~~~~~-~h~~~--------------V~~i~~sp~~~~l~s 217 (877)
+...+.+++||||+++|+++ .++.|++|++.+ .....+. .+... +.+++||||+++|++
T Consensus 119 ~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~ 197 (706)
T 2z3z_A 119 TNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAF 197 (706)
T ss_dssp CTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEE
T ss_pred CcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEE
Confidence 55678889999999999985 679999999876 5544433 33332 589999999999999
Q ss_pred EE---------------------------------CCCcEEEEeccCCeeeEEec--cCCCCeEEEEEcCCCCEEEEEec
Q psy13969 218 CS---------------------------------DDGTVRVWDFYRCTEEKVLR--GHGADVKCVDWHPYKSLIVSGSK 262 (877)
Q Consensus 218 gs---------------------------------~Dg~I~iwd~~~~~~~~~l~--~h~~~v~~v~~sp~~~~l~sgs~ 262 (877)
++ .+..|++||+.+++...... .|...+.+++|+||+++|++++.
T Consensus 198 ~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 277 (706)
T 2z3z_A 198 YRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEV 277 (706)
T ss_dssp EEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEE
T ss_pred EEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEe
Confidence 98 44689999998877654442 46678999999999999998887
Q ss_pred CCc---ccEEEEcCCCCceeEEec--cCCC---CeeEEEEcc--CCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCe
Q psy13969 263 DNQ---QPVKLWDPKAGQALATLH--AHKS---TVMDLAWNQ--NGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEA 332 (877)
Q Consensus 263 dg~---~~I~iwd~~~~~~~~~~~--~h~~---~V~~l~~sp--~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v 332 (877)
+.. ..|++||+.+++.+..+. .+.. .+.+++|+| ++++|++++.|+.++||++......+..+..|...+
T Consensus 278 ~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v 357 (706)
T 2z3z_A 278 NRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEV 357 (706)
T ss_dssp CTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCE
T ss_pred CCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEE
Confidence 751 139999999984443332 2222 347789999 999999999999999998874356677777788888
Q ss_pred EE-EEEcCCCCcEEEEEeCCC----cEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcC----CeEEEEeCC
Q psy13969 333 SA-VAWHPQHEGLFSSGGADG----SIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSND----HASKFWTRN 403 (877)
Q Consensus 333 ~~-i~~~p~~~~~l~sgs~dg----~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~d----g~v~iwd~~ 403 (877)
.+ ++|+|++..++++++.++ .|++||+.+++ +..+ .|...+.+++|+||+++|++...+ ..|++||+.
T Consensus 358 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l--~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~ 434 (706)
T 2z3z_A 358 TNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDL--TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIG 434 (706)
T ss_dssp EEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEES--CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESS
T ss_pred EeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceec--cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECC
Confidence 77 799999997777777665 67777777655 3344 366779999999999988776544 469999986
Q ss_pred CC
Q psy13969 404 RL 405 (877)
Q Consensus 404 ~~ 405 (877)
..
T Consensus 435 ~~ 436 (706)
T 2z3z_A 435 KG 436 (706)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 144
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.85 E-value=9.1e-19 Score=191.71 Aligned_cols=231 Identities=10% Similarity=0.078 Sum_probs=185.2
Q ss_pred ccCCEEEEEEcCCCCEEE-EEeCCCeEEEEeCCCcce-EEEccCCC---------CeeEEEEcCCCCEEEEEE--CCCcE
Q psy13969 158 HDCAVRHMVWSHNGLWMV-TSDHQGYIKYWQSNMNNV-KTFQGHKE---------SIRGISFSPSDSKFATCS--DDGTV 224 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l~-sg~~dg~v~iwd~~~~~~-~~~~~h~~---------~V~~i~~sp~~~~l~sgs--~Dg~I 224 (877)
+...+.+++|++++++|+ +...++.|.+||..+..+ ..+..+.. .+.+++|++++++|++++ .++.|
T Consensus 87 ~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i 166 (353)
T 3vgz_A 87 NDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVI 166 (353)
T ss_dssp ESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEE
T ss_pred cCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceE
Confidence 344577899999998555 556679999999876554 44544432 278999999999888776 47899
Q ss_pred EEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEecc----CCCCeeEEEEccCCCe
Q psy13969 225 RVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHA----HKSTVMDLAWNQNGNW 300 (877)
Q Consensus 225 ~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~----h~~~V~~l~~sp~g~~ 300 (877)
.+||+.+.+.+..+..+...+.+++|++++++|++++.++. |.+||+.+++.+..+.. +...+.+++|++++++
T Consensus 167 ~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 244 (353)
T 3vgz_A 167 WVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGE--LITIDTADNKILSRKKLLDDGKEHFFINISLDTARQR 244 (353)
T ss_dssp EEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSE--EEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTE
T ss_pred EEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCe--EEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCE
Confidence 99999999988888766777899999999999999999888 99999999988877754 4557889999999997
Q ss_pred EEEEeC-CCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEE
Q psy13969 301 LVTASR-DHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTM 379 (877)
Q Consensus 301 l~s~s~-Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v 379 (877)
|++++. ++.|.+||+.+ ...+..+.... ...++|++++..++++...++.|.+||+.+.+.+..+. ....+.++
T Consensus 245 l~~~~~~~~~v~~~d~~~-~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~ 319 (353)
T 3vgz_A 245 AFITDSKAAEVLVVDTRN-GNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFD--TPTHPNSL 319 (353)
T ss_dssp EEEEESSSSEEEEEETTT-CCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEE--CCSEEEEE
T ss_pred EEEEeCCCCEEEEEECCC-CcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEe--cCCCCCeE
Confidence 777665 48999999987 45555555433 35799999999777777789999999999998887773 33468999
Q ss_pred EEcCCCCEEEEEEcCC
Q psy13969 380 AWHPLGHILATGSNDH 395 (877)
Q Consensus 380 ~~sp~g~~l~sg~~dg 395 (877)
+|++++++|+++..++
T Consensus 320 ~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 320 ALSADGKTLYVSVKQK 335 (353)
T ss_dssp EECTTSCEEEEEEECC
T ss_pred EEcCCCCEEEEEEccc
Confidence 9999999887777664
No 145
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.85 E-value=3.1e-20 Score=218.84 Aligned_cols=269 Identities=9% Similarity=0.061 Sum_probs=198.0
Q ss_pred cCCEEEEEEcCCCCEEEEEeC-CCeEEEEeCCCcceEEEccCC-CCeeEEEEcCCCCEEEEEEC---CCcEEEEeccC--
Q psy13969 159 DCAVRHMVWSHNGLWMVTSDH-QGYIKYWQSNMNNVKTFQGHK-ESIRGISFSPSDSKFATCSD---DGTVRVWDFYR-- 231 (877)
Q Consensus 159 ~~~V~~l~~spd~~~l~sg~~-dg~v~iwd~~~~~~~~~~~h~-~~V~~i~~sp~~~~l~sgs~---Dg~I~iwd~~~-- 231 (877)
...|++++|++|+++||+++. ++++.||++++.....+..|. ..|.+++|||| ++|++++. +....||.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 456899999999999998776 999999999888888887777 58999999999 77777775 45566665543
Q ss_pred CeeeEEeccCCCCeEEEEEcCCCC--EEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCC--
Q psy13969 232 CTEEKVLRGHGADVKCVDWHPYKS--LIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRD-- 307 (877)
Q Consensus 232 ~~~~~~l~~h~~~v~~v~~sp~~~--~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~D-- 307 (877)
......+..+ ..+..++|+++++ ++++++.+ . +.+||+.+++.......+ . .+++|||||++|++++.|
T Consensus 100 ~g~~~~l~~~-~~~~~~~~s~dg~~~~~~s~~~~-~--~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 100 PGEEQRLEAV-KPMRILSGVDTGEAVVFTGATED-R--VALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp TTCCEECTTS-CSBEEEEEEECSSCEEEEEECSS-C--EEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEET
T ss_pred CCccccccCC-CCceeeeeCCCCCeEEEEecCCC-C--ceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCC
Confidence 2222244322 2345678888875 34444444 4 669999988765544333 3 899999999999988877
Q ss_pred --CeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCC--cEEEEEcCCCceeEEecCcCCCCEEEEE---
Q psy13969 308 --HLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADG--SIMFWHVGADKEVGCIPQAHDNIIWTMA--- 380 (877)
Q Consensus 308 --g~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg--~I~iwd~~~~~~~~~~~~~h~~~V~~v~--- 380 (877)
..|++||+.+. .+..+..|...+..++|+|+++ +|++++.++ .|++||+.+++.. .+ ..|...|.+++
T Consensus 173 ~~~~i~~~d~~~g--~~~~l~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~i~~~d~~~~~~~-~~-~~~~~~~~~~~~~~ 247 (582)
T 3o4h_A 173 GRVSLFTSNLSSG--GLRVFDSGEGSFSSASISPGMK-VTAGLETAREARLVTVDPRDGSVE-DL-ELPSKDFSSYRPTA 247 (582)
T ss_dssp TEEEEEEEETTTC--CCEEECCSSCEEEEEEECTTSC-EEEEEECSSCEEEEEECTTTCCEE-EC-CCSCSHHHHHCCSE
T ss_pred CCeEEEEEcCCCC--CceEeecCCCccccceECCCCC-EEEEccCCCeeEEEEEcCCCCcEE-Ec-cCCCcChhhhhhcc
Confidence 78999998863 3457788888999999999999 556777888 8999999988776 44 56776677777
Q ss_pred -----EcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCC--eeeecCCC
Q psy13969 381 -----WHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLED--EDSVFPSS 453 (877)
Q Consensus 381 -----~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~--~~~~~~~~ 453 (877)
|+||+.++++++.|++++||++ +.... .. ...+.+++|+ ++..+++.+.... .+++++..
T Consensus 248 ~~~~~~spdg~~~~~~~~~g~~~l~~~---g~~~~------~~---~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 248 ITWLGYLPDGRLAVVARREGRSAVFID---GERVE------AP---QGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp EEEEEECTTSCEEEEEEETTEEEEEET---TEEEC------CC---SSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred ccceeEcCCCcEEEEEEcCCcEEEEEE---CCeec------cC---CCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 9999999999999999999998 22211 11 1346678888 7777776554433 34455443
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.84 E-value=8.6e-20 Score=229.90 Aligned_cols=272 Identities=8% Similarity=0.006 Sum_probs=215.6
Q ss_pred CEEEEEEc-CCCCEEEEEeCCCeEEEEeCCCcceEEEccCCC-CeeEEEEcCCCCEEEEEECCCcEE-EEeccCCeeeEE
Q psy13969 161 AVRHMVWS-HNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKE-SIRGISFSPSDSKFATCSDDGTVR-VWDFYRCTEEKV 237 (877)
Q Consensus 161 ~V~~l~~s-pd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~-~V~~i~~sp~~~~l~sgs~Dg~I~-iwd~~~~~~~~~ 237 (877)
.|.+++|| ||+++|++++ ++.|++|++.......+..|.. .+.+++|+ +++.|++++.+..|. +||+.+.+.. .
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~ 373 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-K 373 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-E
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-E
Confidence 58899999 9999998887 8899999998887777888888 89999999 999999999988898 9999776544 4
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCC---------
Q psy13969 238 LRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDH--------- 308 (877)
Q Consensus 238 l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg--------- 308 (877)
+..|...+.+++|+|++++|++++.++. |++||+.+++....+..|...|.+++||||+++|++++.+.
T Consensus 374 l~~~~~~~~~~~~SpDG~~la~~~~~~~--v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~ 451 (1045)
T 1k32_A 374 FEENLGNVFAMGVDRNGKFAVVANDRFE--IMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVM 451 (1045)
T ss_dssp CCCCCCSEEEEEECTTSSEEEEEETTSE--EEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCE
T ss_pred ecCCccceeeeEECCCCCEEEEECCCCe--EEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCC
Confidence 4478889999999999999999999988 99999999988877778999999999999999999987754
Q ss_pred -eEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCce-----------------------
Q psy13969 309 -LLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKE----------------------- 364 (877)
Q Consensus 309 -~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~----------------------- 364 (877)
.|++||+.+ .. +..+..|...+.+++|+|++. .|++.+.+....+|+......
T Consensus 452 ~~i~l~d~~~-g~-~~~l~~~~~~~~~~~~spdG~-~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (1045)
T 1k32_A 452 QAIHVYDMEG-RK-IFAATTENSHDYAPAFDADSK-NLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKL 528 (1045)
T ss_dssp EEEEEEETTT-TE-EEECSCSSSBEEEEEECTTSC-EEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGC
T ss_pred CeEEEEECCC-Cc-EEEeeCCCcccCCceEcCCCC-EEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCcccc
Confidence 899999987 33 677788888899999999999 556667766666665432211
Q ss_pred --------------------eEEecCcCCCCEEEEEEcCCCCEEEE-----------EE--cCCeEEEEeCCCCCCCccc
Q psy13969 365 --------------------VGCIPQAHDNIIWTMAWHPLGHILAT-----------GS--NDHASKFWTRNRLGDPMRD 411 (877)
Q Consensus 365 --------------------~~~~~~~h~~~V~~v~~sp~g~~l~s-----------g~--~dg~v~iwd~~~~~~~~~~ 411 (877)
+..+ ..|...+.+++|++++.++++ .+ .+..|.+||+.....
T Consensus 529 ~~~~~~~~~~~~d~~g~~~~~~~l-~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~---- 603 (1045)
T 1k32_A 529 VPRSMTSEAGEYDLNDMYKRSSPI-NVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV---- 603 (1045)
T ss_dssp CCGGGSCCCCCCCCTTGGGGCEEC-SCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCE----
T ss_pred CcCccccccccccccCHhHceEEc-CCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcE----
Confidence 1111 235677899999999987775 12 244677777755321
Q ss_pred ccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCCC
Q psy13969 412 RYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 412 ~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~~ 454 (877)
......+..+++++|+..++++. ++.+++|+..+
T Consensus 604 -------~~l~~~v~~~~~S~DG~~l~~~~--~~~i~~~d~~~ 637 (1045)
T 1k32_A 604 -------TEVKNNLTDLRLSADRKTVMVRK--DDGKIYTFPLE 637 (1045)
T ss_dssp -------EEEEEEEEEEEECTTSCEEEEEE--TTSCEEEEESS
T ss_pred -------EEeecCcceEEECCCCCEEEEEc--CCcEEEEeCcc
Confidence 11125577889999999999875 33788887754
No 147
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.84 E-value=4.7e-19 Score=192.42 Aligned_cols=242 Identities=10% Similarity=0.116 Sum_probs=178.5
Q ss_pred cCCEEEEEEcCCCCEEEEEeC-CCeEEEEeCCCcc--eEEEccCCCCeeEEEEcCCCCEEEEEECCC---cEEEEeccCC
Q psy13969 159 DCAVRHMVWSHNGLWMVTSDH-QGYIKYWQSNMNN--VKTFQGHKESIRGISFSPSDSKFATCSDDG---TVRVWDFYRC 232 (877)
Q Consensus 159 ~~~V~~l~~spd~~~l~sg~~-dg~v~iwd~~~~~--~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg---~I~iwd~~~~ 232 (877)
...+ +++|++|+++|++++. ++.|++||..+.. ...+..+...+.+++|++++++|+++..++ .|.+||+.+.
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~ 118 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN 118 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC
Confidence 4455 9999999997766555 8999999987665 556666666666699999999999555553 8999999998
Q ss_pred eeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeE----EeccCCCCeeEEEEccCCCeEEEEe-CC
Q psy13969 233 TEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALA----TLHAHKSTVMDLAWNQNGNWLVTAS-RD 307 (877)
Q Consensus 233 ~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~----~~~~h~~~V~~l~~sp~g~~l~s~s-~D 307 (877)
+.+..+.. ...+.+++|+|++++|++++.+....|.+|++.....+. ....+...+..++|+|++++|++++ .+
T Consensus 119 ~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 197 (331)
T 3u4y_A 119 KFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIG 197 (331)
T ss_dssp EEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTT
T ss_pred CeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCC
Confidence 88877764 455799999999987776655543128999987543321 2223455689999999999665554 68
Q ss_pred CeEEEEEcCCCCcc---eEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCce--eEEecCc---CC---CCE
Q psy13969 308 HLLKVFDIRNLSSE---VQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKE--VGCIPQA---HD---NII 376 (877)
Q Consensus 308 g~I~iwd~~~~~~~---~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~--~~~~~~~---h~---~~V 376 (877)
+.|++||+.+ ... +..+.. ...+..++|+|+++.++++...++.|.+||+.+++. +..+... +. ..+
T Consensus 198 ~~v~v~d~~~-~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (331)
T 3u4y_A 198 NSIGILETQN-PENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGA 275 (331)
T ss_dssp TEEEEEECSS-TTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTC
T ss_pred CeEEEEECCC-CcccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccc
Confidence 8999999987 444 555553 467789999999996767666788999999998776 3332111 11 223
Q ss_pred EEEEEcCCCCEEEEEEc-CCeEEEEeCCC
Q psy13969 377 WTMAWHPLGHILATGSN-DHASKFWTRNR 404 (877)
Q Consensus 377 ~~v~~sp~g~~l~sg~~-dg~v~iwd~~~ 404 (877)
..++|+|++++|++++. ++.|.+||+..
T Consensus 276 ~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 276 NQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp CCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred cceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 56899999998866665 56999999864
No 148
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.84 E-value=5e-20 Score=208.12 Aligned_cols=199 Identities=13% Similarity=0.180 Sum_probs=157.7
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-----------cceE-----EEccCCCCeeEEEEcCCCCEEE----EE
Q psy13969 159 DCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-----------NNVK-----TFQGHKESIRGISFSPSDSKFA----TC 218 (877)
Q Consensus 159 ~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~-----------~~~~-----~~~~h~~~V~~i~~sp~~~~l~----sg 218 (877)
...++.|+++++..+|++++.++ |+||+... ..+. ....|...|++|+|++++++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 34578899999999999998888 88876321 0111 1224567899999999999999 77
Q ss_pred ECCCcEEEEeccCC--------e---eeEEeccCCCCeEEEEEcCC-CCEEEEEecCCcccEEEEcCCCCceeEEeccCC
Q psy13969 219 SDDGTVRVWDFYRC--------T---EEKVLRGHGADVKCVDWHPY-KSLIVSGSKDNQQPVKLWDPKAGQALATLHAHK 286 (877)
Q Consensus 219 s~Dg~I~iwd~~~~--------~---~~~~l~~h~~~v~~v~~sp~-~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~ 286 (877)
+.|++|+|||+.+. + .+..+.+|...|.+|+|+|+ +++|++++.|+. |++||+++...+.....|.
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~--v~iwD~~~~~~~~~~~~~~ 192 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS--IAVLQVTETVKVCATLPST 192 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC--EEEEEESSSEEEEEEECGG
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe--EEEEEcCCCcceeeccCCC
Confidence 88999999998754 1 24556679999999999998 789999999999 9999999987777777789
Q ss_pred CCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecC-------CCCeEEEEEcCCCCcEEEEEeCCCc------
Q psy13969 287 STVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGH-------KKEASAVAWHPQHEGLFSSGGADGS------ 353 (877)
Q Consensus 287 ~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h-------~~~v~~i~~~p~~~~~l~sgs~dg~------ 353 (877)
..|++++|+|++++|++++.|++|++||++. .....+..| ...|.+++|+++...++++.+.|+.
T Consensus 193 ~~v~~v~wspdg~~lasgs~dg~v~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~ 270 (434)
T 2oit_A 193 VAVTSVCWSPKGKQLAVGKQNGTVVQYLPTL--QEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPD 270 (434)
T ss_dssp GCEEEEEECTTSSCEEEEETTSCEEEECTTC--CEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCE
T ss_pred CceeEEEEcCCCCEEEEEcCCCcEEEEccCC--cccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCc
Confidence 9999999999999999999999999999983 334444433 2378999999987644444555543
Q ss_pred EEEEEcCCC
Q psy13969 354 IMFWHVGAD 362 (877)
Q Consensus 354 I~iwd~~~~ 362 (877)
+++|++...
T Consensus 271 v~i~~l~~~ 279 (434)
T 2oit_A 271 VVMALLPKK 279 (434)
T ss_dssp EEEEECCCT
T ss_pred eEEEEeccC
Confidence 899999765
No 149
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.83 E-value=4.3e-19 Score=192.67 Aligned_cols=265 Identities=11% Similarity=0.084 Sum_probs=195.0
Q ss_pred CEEEEEeCCCeEEEEeCCCcceEEEccCCC---CeeEEEEcCCCCEEEE-EECCCcEEEEeccCCeeeEEecc-C----C
Q psy13969 172 LWMVTSDHQGYIKYWQSNMNNVKTFQGHKE---SIRGISFSPSDSKFAT-CSDDGTVRVWDFYRCTEEKVLRG-H----G 242 (877)
Q Consensus 172 ~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~---~V~~i~~sp~~~~l~s-gs~Dg~I~iwd~~~~~~~~~l~~-h----~ 242 (877)
++|++++.++.|++||..+..+.....+.. .+.+++|++++++|++ ++.++.|.+||+.+++.+..+.. + .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 478899999999999987765443333333 5889999999987654 45578999999998887776653 1 1
Q ss_pred CCeEEEEEcCCCCEEEEEe------------cCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeE
Q psy13969 243 ADVKCVDWHPYKSLIVSGS------------KDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLL 310 (877)
Q Consensus 243 ~~v~~v~~sp~~~~l~sgs------------~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I 310 (877)
..+.+++|++++++|++++ .++. |.+||+.+++.+..+.. ...+.+++|++++++|+++ ++.|
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~--i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i 156 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTR--VALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDL 156 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCE--EEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCce--EEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeE
Confidence 2678899999999888886 4676 99999999888777754 4568899999999988888 6889
Q ss_pred EEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCC-----------------------cEEEEEcCCCceeEE
Q psy13969 311 KVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADG-----------------------SIMFWHVGADKEVGC 367 (877)
Q Consensus 311 ~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg-----------------------~I~iwd~~~~~~~~~ 367 (877)
++||+.+ ...+..+..+.. ...++|+|++..+++++..++ .|.+||+.+.+....
T Consensus 157 ~~~d~~~-~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 234 (337)
T 1pby_B 157 HVMDPEA-GTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR 234 (337)
T ss_dssp EEEETTT-TEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred EEEECCC-CcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEe
Confidence 9999987 455555554331 113378888886555543333 468999998876522
Q ss_pred ecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCee
Q psy13969 368 IPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDED 447 (877)
Q Consensus 368 ~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~ 447 (877)
....+...+.+++|++++++|+++ ++.|++||+...... . .. .....+.++.|++++.+++++ ..++.+
T Consensus 235 ~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~-~-~~------~~~~~~~~~~~s~dg~~l~~~-~~~~~i 303 (337)
T 1pby_B 235 EVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASI-K-RV------PLPHSYYSVNVSTDGSTVWLG-GALGDL 303 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEE-E-EE------ECSSCCCEEEECTTSCEEEEE-SBSSEE
T ss_pred ecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCc-c-ee------cCCCceeeEEECCCCCEEEEE-cCCCcE
Confidence 223566778999999999999888 689999998653211 1 11 111346778999999988886 468899
Q ss_pred eecCCCC
Q psy13969 448 SVFPSSE 454 (877)
Q Consensus 448 ~~~~~~~ 454 (877)
.+|+..+
T Consensus 304 ~v~d~~~ 310 (337)
T 1pby_B 304 AAYDAET 310 (337)
T ss_dssp EEEETTT
T ss_pred EEEECcC
Confidence 9998754
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.83 E-value=4.1e-19 Score=223.70 Aligned_cols=232 Identities=13% Similarity=0.095 Sum_probs=190.7
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEcc-----------CCCCeeEEEEc-CCCCEEEEEECCCcEEEEe
Q psy13969 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQG-----------HKESIRGISFS-PSDSKFATCSDDGTVRVWD 228 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~-----------h~~~V~~i~~s-p~~~~l~sgs~Dg~I~iwd 228 (877)
.+.+++|+||+++|+++ .++.|++|++....+..+.. |...|.+++|| |++++|++++ ++.|++|+
T Consensus 246 ~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~ 323 (1045)
T 1k32_A 246 DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQD 323 (1045)
T ss_dssp SSCEEEEEESSSCEEEE-ETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEEC
T ss_pred CcceeeEcCCCCEEEEE-eCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEc
Confidence 46678999999998887 48999999986666655544 34479999999 9999999888 78999999
Q ss_pred ccCCeeeEEeccCCC-CeEEEEEcCCCCEEEEEecCCcccEE-EEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeC
Q psy13969 229 FYRCTEEKVLRGHGA-DVKCVDWHPYKSLIVSGSKDNQQPVK-LWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASR 306 (877)
Q Consensus 229 ~~~~~~~~~l~~h~~-~v~~v~~sp~~~~l~sgs~dg~~~I~-iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~ 306 (877)
+...... .+..|.. .+.+++|+ +++.|++++.+.. |. +||+.+++.. .+..|...+.+++|+||+++|++++.
T Consensus 324 ~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~--l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~ 398 (1045)
T 1k32_A 324 VSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGD--FLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVAND 398 (1045)
T ss_dssp TTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEE--EEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEET
T ss_pred CCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCc--eEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECC
Confidence 9876544 4566777 89999999 9999999888765 88 9999877644 44478889999999999999999999
Q ss_pred CCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCC----------CcEEEEEcCCCceeEEecCcCCCCE
Q psy13969 307 DHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGAD----------GSIMFWHVGADKEVGCIPQAHDNII 376 (877)
Q Consensus 307 Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~d----------g~I~iwd~~~~~~~~~~~~~h~~~V 376 (877)
++.|++||+.+ ......+..|...+.+++|+|++..+ ++++.+ ..|++||+.+++ +..+ ..|...+
T Consensus 399 ~~~v~~~d~~t-g~~~~~~~~~~~~v~~~~~SpDG~~l-a~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l-~~~~~~~ 474 (1045)
T 1k32_A 399 RFEIMTVDLET-GKPTVIERSREAMITDFTISDNSRFI-AYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAA-TTENSHD 474 (1045)
T ss_dssp TSEEEEEETTT-CCEEEEEECSSSCCCCEEECTTSCEE-EEEEEECSSTTCSCCEEEEEEEETTTTE-EEEC-SCSSSBE
T ss_pred CCeEEEEECCC-CceEEeccCCCCCccceEECCCCCeE-EEEecCccccccCCCCCeEEEEECCCCc-EEEe-eCCCccc
Confidence 99999999987 45556666899999999999999954 444443 489999999877 4444 5778889
Q ss_pred EEEEEcCCCCEEEEEEcCCeEEEEeCC
Q psy13969 377 WTMAWHPLGHILATGSNDHASKFWTRN 403 (877)
Q Consensus 377 ~~v~~sp~g~~l~sg~~dg~v~iwd~~ 403 (877)
.+++|++|+++|++++.++.+.+|+..
T Consensus 475 ~~~~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 475 YAPAFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp EEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred CCceEcCCCCEEEEEecccCCcCcchh
Confidence 999999999999999998888888754
No 151
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.83 E-value=9.7e-20 Score=205.78 Aligned_cols=213 Identities=13% Similarity=0.150 Sum_probs=161.5
Q ss_pred CeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCe----------eeE-----EeccCCCCe
Q psy13969 181 GYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCT----------EEK-----VLRGHGADV 245 (877)
Q Consensus 181 g~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~----------~~~-----~l~~h~~~v 245 (877)
+.|++|+.... .+...++.|+++++..+|++++.|+ |+||+..... .+. ....+...|
T Consensus 23 ~~vri~~~~~~------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 95 (434)
T 2oit_A 23 KKVRIFDSPEE------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPI 95 (434)
T ss_dssp CEEECSCCCSS------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCE
T ss_pred eeEEecCCccc------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcc
Confidence 45777764321 1344688999999999999999887 8998753210 011 111256679
Q ss_pred EEEEEcCCCCEEE----EEecCCcccEEEEcCCCC--------ce---eEEeccCCCCeeEEEEccC-CCeEEEEeCCCe
Q psy13969 246 KCVDWHPYKSLIV----SGSKDNQQPVKLWDPKAG--------QA---LATLHAHKSTVMDLAWNQN-GNWLVTASRDHL 309 (877)
Q Consensus 246 ~~v~~sp~~~~l~----sgs~dg~~~I~iwd~~~~--------~~---~~~~~~h~~~V~~l~~sp~-g~~l~s~s~Dg~ 309 (877)
++++|++++++|+ +++.|+. |+|||+++. +. +..+..|...|++|+|+|+ +.+|++++.|++
T Consensus 96 ~~l~~spdg~~lav~~~sgs~d~~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~ 173 (434)
T 2oit_A 96 HHLALSCDNLTLSACMMSSEYGSI--IAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS 173 (434)
T ss_dssp EEEEECTTSCEEEEEEEETTTEEE--EEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred cEEEEcCCCCEEEEEEeccCCCce--EEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence 9999999999999 6778888 999998654 22 4455679999999999997 889999999999
Q ss_pred EEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecC------cCCCCEEEEEEcC
Q psy13969 310 LKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ------AHDNIIWTMAWHP 383 (877)
Q Consensus 310 I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~------~h~~~V~~v~~sp 383 (877)
|+|||+++. ..+.....|...|++++|+|++. +|++++.|++|++||++ .+....+.. .|...|.+++|++
T Consensus 174 v~iwD~~~~-~~~~~~~~~~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~ 250 (434)
T 2oit_A 174 IAVLQVTET-VKVCATLPSTVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG 250 (434)
T ss_dssp EEEEEESSS-EEEEEEECGGGCEEEEEECTTSS-CEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE
T ss_pred EEEEEcCCC-cceeeccCCCCceeEEEEcCCCC-EEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEec
Confidence 999999984 55556667899999999999987 78899999999999998 444444421 1234799999999
Q ss_pred CCCEEEEEE-cCC------eEEEEeCCCC
Q psy13969 384 LGHILATGS-NDH------ASKFWTRNRL 405 (877)
Q Consensus 384 ~g~~l~sg~-~dg------~v~iwd~~~~ 405 (877)
+..+|++.+ .|+ .+++|++...
T Consensus 251 ~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 251 TYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CceEEEEEccCCCccCCCCceEEEEeccC
Confidence 887765543 443 3899999764
No 152
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.83 E-value=6.8e-19 Score=191.12 Aligned_cols=234 Identities=11% Similarity=0.079 Sum_probs=179.8
Q ss_pred CEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCcceE-EEcc-C----CCCeeEEEEcCCCCEEEEEE------------CC
Q psy13969 161 AVRHMVWSHNGLWM-VTSDHQGYIKYWQSNMNNVK-TFQG-H----KESIRGISFSPSDSKFATCS------------DD 221 (877)
Q Consensus 161 ~V~~l~~spd~~~l-~sg~~dg~v~iwd~~~~~~~-~~~~-h----~~~V~~i~~sp~~~~l~sgs------------~D 221 (877)
.+.+++|++|+++| ++...++.|.+||+.+..+. .+.. + ...+.+++|++++++|++++ .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 47889999999766 45666889999998765543 3332 2 12678899999999998886 57
Q ss_pred CcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeE
Q psy13969 222 GTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWL 301 (877)
Q Consensus 222 g~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l 301 (877)
+.|.+||+.+.+.+..+.. ...+.+++|+|++++|+++ ++. |++||+.+++.+..+..+.. ...+.|++++.+|
T Consensus 115 ~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~--i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l 188 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRD--LHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLAV 188 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSS--EEEEETTTTEEEEEECSTTT-TTTTBCCCBCCCC
T ss_pred ceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCe--EEEEECCCCcEeeeeecccc-CCCceeCCCccEE
Confidence 9999999998888777764 5568899999999988877 566 99999999988877765431 1233788988876
Q ss_pred EEEeCCC------------------------eEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEE
Q psy13969 302 VTASRDH------------------------LLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFW 357 (877)
Q Consensus 302 ~s~s~Dg------------------------~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iw 357 (877)
++.+.+. .|.+||+.+.......+..+...+.+++|+|++.. ++++ ++.|++|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~--~~~v~~~ 265 (337)
T 1pby_B 189 WNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTR-AFGA--YNVLESF 265 (337)
T ss_dssp CCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSE-EEEE--ESEEEEE
T ss_pred eeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCE-EEEe--CCeEEEE
Confidence 6554332 46899998744333445556778889999999984 4444 6899999
Q ss_pred EcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCC
Q psy13969 358 HVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRL 405 (877)
Q Consensus 358 d~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~ 405 (877)
|+.+.+.+..+. ....+.+++|++++++|++++.++.|++||+.+.
T Consensus 266 d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 266 DLEKNASIKRVP--LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp ETTTTEEEEEEE--CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred ECCCCcCcceec--CCCceeeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence 999988877763 3346789999999999999999999999998753
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.82 E-value=1.2e-18 Score=190.42 Aligned_cols=229 Identities=9% Similarity=0.068 Sum_probs=172.3
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCcceE-EEccCC-CCeeEEEEcCCCCEEEEE-ECCCcEEEEeccCCeeeEEecc
Q psy13969 164 HMVWSHNGLWMVTSDHQGYIKYWQSNMNNVK-TFQGHK-ESIRGISFSPSDSKFATC-SDDGTVRVWDFYRCTEEKVLRG 240 (877)
Q Consensus 164 ~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~-~~~~h~-~~V~~i~~sp~~~~l~sg-s~Dg~I~iwd~~~~~~~~~l~~ 240 (877)
.+++++++.++++++.++.|++||..+..+. .+..+. ..+..++|++++++++++ ..++.|.+||+.+++.+..+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 3567788889999999999999998775543 444332 267899999999866544 5689999999998888777653
Q ss_pred CC------CCeEEEEEcCCCCEEEEEecC------------CcccEEEEcCCCCc---eeEEeccCCCCeeEEEEccCCC
Q psy13969 241 HG------ADVKCVDWHPYKSLIVSGSKD------------NQQPVKLWDPKAGQ---ALATLHAHKSTVMDLAWNQNGN 299 (877)
Q Consensus 241 h~------~~v~~v~~sp~~~~l~sgs~d------------g~~~I~iwd~~~~~---~~~~~~~h~~~V~~l~~sp~g~ 299 (877)
+. ..+.+++|+|++++|++++.+ +. |.+||+.+++ .+..+. +...+.+++|+++++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~--i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPR--LEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS 160 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCE--EEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCe--EEEEECCCccccceeeecc-CCCcccceeECCCCc
Confidence 32 237899999999999988865 66 9999998844 333443 344689999999999
Q ss_pred eEEEEeCCCeEEEEEcCCCCcceEEEecCC--------------------------------------------------
Q psy13969 300 WLVTASRDHLLKVFDIRNLSSEVQTFRGHK-------------------------------------------------- 329 (877)
Q Consensus 300 ~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~-------------------------------------------------- 329 (877)
|++++. .|++||+.+. ..+..+..+.
T Consensus 161 -l~~~~~--~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 236 (349)
T 1jmx_B 161 -LYVAGP--DIYKMDVKTG-KYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 236 (349)
T ss_dssp -EEEESS--SEEEECTTTC-CEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEE
T ss_pred -EEEccC--cEEEEeCCCC-ceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEE
Confidence 665544 4999998763 3333333221
Q ss_pred ------------------CCeEEEEEcC-CCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEE
Q psy13969 330 ------------------KEASAVAWHP-QHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILAT 390 (877)
Q Consensus 330 ------------------~~v~~i~~~p-~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~s 390 (877)
..+.+++|+| ++. +++++ ++.|.+||+.+.+.+..+. ....+.+++|++++++|++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~-~l~~~--~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~ 311 (349)
T 1jmx_B 237 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV--LNRLAKYDLKQRKLIKAAN--LDHTYYCVAFDKKGDKLYL 311 (349)
T ss_dssp EEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE--ESEEEEEETTTTEEEEEEE--CSSCCCEEEECSSSSCEEE
T ss_pred EEeccCCcEEecccccCCCcceeeEecCCCCC-EEEEE--cCeEEEEECccCeEEEEEc--CCCCccceEECCCCCEEEE
Confidence 1345677889 888 44554 8899999999988877763 3345789999999988888
Q ss_pred EEcCCeEEEEeCCC
Q psy13969 391 GSNDHASKFWTRNR 404 (877)
Q Consensus 391 g~~dg~v~iwd~~~ 404 (877)
++.++.|++||+.+
T Consensus 312 ~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 312 GGTFNDLAVFNPDT 325 (349)
T ss_dssp ESBSSEEEEEETTT
T ss_pred ecCCCeEEEEeccc
Confidence 88899999999865
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.82 E-value=2.2e-17 Score=181.90 Aligned_cols=257 Identities=13% Similarity=0.189 Sum_probs=179.0
Q ss_pred cCCeEEEEEccCC-cee----eccCCEEEEEEcCCCCEEEEEeCC----CeEEEEeCCC--cceE---EEccCCCCeeEE
Q psy13969 141 RCPIFSMTWTPEG-RRL----AHDCAVRHMVWSHNGLWMVTSDHQ----GYIKYWQSNM--NNVK---TFQGHKESIRGI 206 (877)
Q Consensus 141 ~~~i~~~~~sp~g-~~l----~h~~~V~~l~~spd~~~l~sg~~d----g~v~iwd~~~--~~~~---~~~~h~~~V~~i 206 (877)
...|+.+.|.++. .+. .+...+..++|+||+++|++++.+ +.|.+|+++. ..+. .+..+......+
T Consensus 26 ~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~ 105 (361)
T 3scy_A 26 SKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYL 105 (361)
T ss_dssp CCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEE
T ss_pred CCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEE
Confidence 3456666666542 211 156778889999999999988875 7999998654 3332 334455677788
Q ss_pred EEcCCCCEEEEEE-CCCcEEEEeccCCeeeEEe------c--------cCCCCeEEEEEcCCCCEEEEEec-CCcccEEE
Q psy13969 207 SFSPSDSKFATCS-DDGTVRVWDFYRCTEEKVL------R--------GHGADVKCVDWHPYKSLIVSGSK-DNQQPVKL 270 (877)
Q Consensus 207 ~~sp~~~~l~sgs-~Dg~I~iwd~~~~~~~~~l------~--------~h~~~v~~v~~sp~~~~l~sgs~-dg~~~I~i 270 (877)
++ ++++|++++ .+++|.+|++.....+..+ . .+...+.+++|+|++++|++++. ++. |.+
T Consensus 106 ~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~--v~v 181 (361)
T 3scy_A 106 TT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ--IHK 181 (361)
T ss_dssp EE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE--EEE
T ss_pred EE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCE--EEE
Confidence 88 788777776 5789999999754332211 1 11234688999999997766654 566 999
Q ss_pred EcCCCCce------e-------EEeccCCCCeeEEEEccCCCeEEEEe-CCCeEEEEEcCCCCcc--eEEEe---cCCCC
Q psy13969 271 WDPKAGQA------L-------ATLHAHKSTVMDLAWNQNGNWLVTAS-RDHLLKVFDIRNLSSE--VQTFR---GHKKE 331 (877)
Q Consensus 271 wd~~~~~~------~-------~~~~~h~~~V~~l~~sp~g~~l~s~s-~Dg~I~iwd~~~~~~~--~~~~~---~h~~~ 331 (877)
|++..... + .....+...+.+++|+|++++|++++ .++.|++||+.. ... +..+. .+...
T Consensus 182 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~-g~~~~~~~~~~~~~~~~~ 260 (361)
T 3scy_A 182 FNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD-GMLDEIQTVAADTVNAQG 260 (361)
T ss_dssp EEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEET-TEEEEEEEEESCSSCCCC
T ss_pred EEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC-CceEEeEEEecCCCCCCC
Confidence 98775431 1 12223456688999999999888777 689999999985 222 22222 23345
Q ss_pred eEEEEEcCCCCcEEEEEeC-CCcEEEEEcC--CCc--eeEEecCcCCCCEEEEEEcCCCCEEEEEE-cCCeEEEEeCCC
Q psy13969 332 ASAVAWHPQHEGLFSSGGA-DGSIMFWHVG--ADK--EVGCIPQAHDNIIWTMAWHPLGHILATGS-NDHASKFWTRNR 404 (877)
Q Consensus 332 v~~i~~~p~~~~~l~sgs~-dg~I~iwd~~--~~~--~~~~~~~~h~~~V~~v~~sp~g~~l~sg~-~dg~v~iwd~~~ 404 (877)
+..++|+|+++.++++... ++.|.||++. +++ .+..+. . ...+.+++|+|++++|++++ .++.|.+|+++.
T Consensus 261 ~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~-~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 261 SGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL-T-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp EEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE-C-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred cccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec-C-CCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 7899999999966566655 6899999996 333 333332 2 45678999999999888888 678999987764
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.81 E-value=4.4e-18 Score=186.29 Aligned_cols=267 Identities=10% Similarity=0.114 Sum_probs=181.6
Q ss_pred CCeEEEEeCC--CcceE--EEccCCCCeeEEEEcCCCCEEEEEEC---CCcEEEEeccCCe--eeEEeccCCCCeEEEEE
Q psy13969 180 QGYIKYWQSN--MNNVK--TFQGHKESIRGISFSPSDSKFATCSD---DGTVRVWDFYRCT--EEKVLRGHGADVKCVDW 250 (877)
Q Consensus 180 dg~v~iwd~~--~~~~~--~~~~h~~~V~~i~~sp~~~~l~sgs~---Dg~I~iwd~~~~~--~~~~l~~h~~~v~~v~~ 250 (877)
+..|++|+++ +..+. ....+...+..|+|+|+++ |++++. ++.|++||+.+++ .+..+..+...+..++|
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV 93 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE
Confidence 4567777654 33332 2344567788899999998 555554 6899999997665 34444557778899999
Q ss_pred cCCCCEEEEEe-cCCcccEEEEcCCC-C--ceeEEecc---------CCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCC
Q psy13969 251 HPYKSLIVSGS-KDNQQPVKLWDPKA-G--QALATLHA---------HKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRN 317 (877)
Q Consensus 251 sp~~~~l~sgs-~dg~~~I~iwd~~~-~--~~~~~~~~---------h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~ 317 (877)
+|++++|++++ .++. |.+||+.. + +.+..+.. +...+.+++|+|+++++++...++.|++||+..
T Consensus 94 spdg~~l~~~~~~~~~--v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 94 DEARQLVYSANYHKGT--AEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp ETTTTEEEEEETTTTE--EEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECT
T ss_pred CCCCCEEEEEeCCCCE--EEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECC
Confidence 99999888888 5666 99999963 2 22333321 123488999999999666666788999999983
Q ss_pred CCcce--EEEecC-CCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCC--Cce--eEEecCcC-----CCCEEEEEEcCCC
Q psy13969 318 LSSEV--QTFRGH-KKEASAVAWHPQHEGLFSSGGADGSIMFWHVGA--DKE--VGCIPQAH-----DNIIWTMAWHPLG 385 (877)
Q Consensus 318 ~~~~~--~~~~~h-~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~--~~~--~~~~~~~h-----~~~V~~v~~sp~g 385 (877)
..... ..+..+ ...+..++|+|+++.++++...++.|.+|++.. ++. +..+.... ...+..++|+||+
T Consensus 172 ~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG 251 (347)
T 3hfq_A 172 AGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDG 251 (347)
T ss_dssp TSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTS
T ss_pred CCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCC
Confidence 23222 122222 336788999999997777777889999999874 332 22221111 1458899999999
Q ss_pred CEEE-EEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCC
Q psy13969 386 HILA-TGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSS 453 (877)
Q Consensus 386 ~~l~-sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~ 453 (877)
++|+ +...++.|.+|+++..+. +.. ...+..+...+..++|++|+.+|+++...++.+.+|...
T Consensus 252 ~~l~v~~~~~~~v~v~~~~~~g~-~~~---~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 252 HFLYVSNRGYNTLAVFAVTADGH-LTL---IQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp CEEEEEEETTTEEEEEEECGGGC-EEE---EEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEeCCCCEEEEEEECCCCc-EEE---eEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 9774 555689999999863221 111 111111122367889999999988877677889999554
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.81 E-value=3.3e-19 Score=215.74 Aligned_cols=284 Identities=10% Similarity=0.047 Sum_probs=191.8
Q ss_pred CEEEEEEcCCCCEEEEEeC---------CCeEEEEeCCCcce---EEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEe
Q psy13969 161 AVRHMVWSHNGLWMVTSDH---------QGYIKYWQSNMNNV---KTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWD 228 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~~---------dg~v~iwd~~~~~~---~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd 228 (877)
.|.+++||||+++|++++. ++.|++||+++... ..+ ...+.+++||||+++||+++ |+.|++||
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~ 136 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQ 136 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEES
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEe
Confidence 3899999999999998876 78999999987765 333 35689999999999999986 77999999
Q ss_pred ccCCeeeEEe-ccCCCCe-----------------EEEEEcCCCCEEEEEecCCc-------------------------
Q psy13969 229 FYRCTEEKVL-RGHGADV-----------------KCVDWHPYKSLIVSGSKDNQ------------------------- 265 (877)
Q Consensus 229 ~~~~~~~~~l-~~h~~~v-----------------~~v~~sp~~~~l~sgs~dg~------------------------- 265 (877)
+.+++..... .++...| .+++|+||+++|++++.|..
T Consensus 137 ~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~ 216 (719)
T 1z68_A 137 RPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPK 216 (719)
T ss_dssp STTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCB
T ss_pred CCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCC
Confidence 9887665433 2222222 48999999999999886631
Q ss_pred -------ccEEEEcCCCCcee--EE------eccCCCCeeEEEEccCCCeEEEEeCC----CeEEEEE----cCCCCcce
Q psy13969 266 -------QPVKLWDPKAGQAL--AT------LHAHKSTVMDLAWNQNGNWLVTASRD----HLLKVFD----IRNLSSEV 322 (877)
Q Consensus 266 -------~~I~iwd~~~~~~~--~~------~~~h~~~V~~l~~sp~g~~l~s~s~D----g~I~iwd----~~~~~~~~ 322 (877)
..|++||+.+++.+ .. +..|...+.+++||||++++++.... ..|.+|| +.+ ....
T Consensus 217 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~-g~~~ 295 (719)
T 1z68_A 217 AGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQT-WDCP 295 (719)
T ss_dssp TTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSS-EECC
T ss_pred CCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCC-CceE
Confidence 13889999987653 12 33578889999999998776664432 2488899 655 2333
Q ss_pred EEE----ecCCCCeE-----EEEEcCCCCcEEE-EEeCCC--cEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEE
Q psy13969 323 QTF----RGHKKEAS-----AVAWHPQHEGLFS-SGGADG--SIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILAT 390 (877)
Q Consensus 323 ~~~----~~h~~~v~-----~i~~~p~~~~~l~-sgs~dg--~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~s 390 (877)
..+ ..|...+. +++|+|++..+++ +...++ .|.+||+...+ ...+ ..+...|..+.++ +++.|+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~l-t~~~~~v~~~~~~-d~~~i~~ 372 (719)
T 1z68_A 296 KTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQI-TSGKWEAINIFRV-TQDSLFY 372 (719)
T ss_dssp GGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEEC-SCSSSCEEEEEEE-CSSEEEE
T ss_pred EEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEec-ccCceEEEEEEEE-eCCEEEE
Confidence 333 45677776 8999999987655 344555 57777776665 3344 3456668888877 8877776
Q ss_pred EEcC-----CeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCC--CeeeecCC
Q psy13969 391 GSND-----HASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLE--DEDSVFPS 452 (877)
Q Consensus 391 g~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d--~~~~~~~~ 452 (877)
.+.+ +.++||.++..............+..+...+..+.|++++..++...... ..+.+|+.
T Consensus 373 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~ 441 (719)
T 1z68_A 373 SSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDG 441 (719)
T ss_dssp EESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECS
T ss_pred EEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEEC
Confidence 6655 88999988652221100000001111223456677888877776533222 34556654
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.80 E-value=2.3e-18 Score=202.96 Aligned_cols=225 Identities=11% Similarity=0.018 Sum_probs=170.1
Q ss_pred CCEEEEEEcCCCCEEEEEeC---CCeEEEEe--C--CCcceEEEccCCCCeeEEEEcCCCCE-EEEEECCCcEEEEeccC
Q psy13969 160 CAVRHMVWSHNGLWMVTSDH---QGYIKYWQ--S--NMNNVKTFQGHKESIRGISFSPSDSK-FATCSDDGTVRVWDFYR 231 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~~---dg~v~iwd--~--~~~~~~~~~~h~~~V~~i~~sp~~~~-l~sgs~Dg~I~iwd~~~ 231 (877)
..|.+++|||| ++|++++. +....||. . ..... .+..+. .+..++|+++++. +++.+.++.+.|||+.+
T Consensus 65 ~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~ 141 (582)
T 3o4h_A 65 NSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDG 141 (582)
T ss_dssp SEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEET
T ss_pred cccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccC
Confidence 57999999999 77777765 45556655 4 33333 333332 3456788888753 34444455666999988
Q ss_pred CeeeEEeccCCCCeEEEEEcCCCCEEEEEecC----CcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCC
Q psy13969 232 CTEEKVLRGHGADVKCVDWHPYKSLIVSGSKD----NQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRD 307 (877)
Q Consensus 232 ~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~d----g~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~D 307 (877)
++.......+. .+++|+||+++|++++.+ .. |++||+.+++.. .+..|...+.+++||||+++|+++..+
T Consensus 142 g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~--i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~ 215 (582)
T 3o4h_A 142 GGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVS--LFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETA 215 (582)
T ss_dssp TEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEE--EEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECS
T ss_pred CcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeE--EEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCC
Confidence 87665554333 899999999999988877 55 999999888754 677888899999999999999988888
Q ss_pred C--eEEEEEcCCCCcceEEEecCCCCeEEEE--------EcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEE
Q psy13969 308 H--LLKVFDIRNLSSEVQTFRGHKKEASAVA--------WHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIW 377 (877)
Q Consensus 308 g--~I~iwd~~~~~~~~~~~~~h~~~v~~i~--------~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~ 377 (877)
+ .|++||+.+ .... .+..|...+..++ |+|++ .++++++.|++++||++ ++.+. .+...|.
T Consensus 216 ~~~~i~~~d~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~--g~~~~----~~~~~v~ 286 (582)
T 3o4h_A 216 REARLVTVDPRD-GSVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID--GERVE----APQGNHG 286 (582)
T ss_dssp SCEEEEEECTTT-CCEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET--TEEEC----CCSSEEE
T ss_pred CeeEEEEEcCCC-CcEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE--CCeec----cCCCceE
Confidence 8 899999987 3444 6677777777777 99999 69999999999999999 55443 2346789
Q ss_pred EEEEcCCCCEEEEEEcCCe---EEEEeCC
Q psy13969 378 TMAWHPLGHILATGSNDHA---SKFWTRN 403 (877)
Q Consensus 378 ~v~~sp~g~~l~sg~~dg~---v~iwd~~ 403 (877)
+++|+ +++++++++.+.+ |.+|+..
T Consensus 287 ~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 287 RVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp EEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred EEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 99999 9999998888764 6666654
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.79 E-value=4.6e-17 Score=179.30 Aligned_cols=275 Identities=9% Similarity=0.058 Sum_probs=185.1
Q ss_pred CEEEEEe----CCCeEEEEeCC--CcceEEEc-cCCCCeeEEEEcCCCCEEEEEECC----CcEEEEeccC--Ce--eeE
Q psy13969 172 LWMVTSD----HQGYIKYWQSN--MNNVKTFQ-GHKESIRGISFSPSDSKFATCSDD----GTVRVWDFYR--CT--EEK 236 (877)
Q Consensus 172 ~~l~sg~----~dg~v~iwd~~--~~~~~~~~-~h~~~V~~i~~sp~~~~l~sgs~D----g~I~iwd~~~--~~--~~~ 236 (877)
.+|+.++ .++.|++|.++ +..+..+. .|...+..|+|+|++++|++++.+ +.|.+|++.. ++ .+.
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~ 93 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN 93 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEE
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEee
Confidence 3455554 35688888753 33332221 167778889999999999999986 7999999865 33 233
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEec-CCcccEEEEcCCCCceeEEe------cc--------CCCCeeEEEEccCCCeE
Q psy13969 237 VLRGHGADVKCVDWHPYKSLIVSGSK-DNQQPVKLWDPKAGQALATL------HA--------HKSTVMDLAWNQNGNWL 301 (877)
Q Consensus 237 ~l~~h~~~v~~v~~sp~~~~l~sgs~-dg~~~I~iwd~~~~~~~~~~------~~--------h~~~V~~l~~sp~g~~l 301 (877)
.+..+......+++ ++++|++++. ++. |.+|++.....+..+ .. +...+.+++|+|++++|
T Consensus 94 ~~~~~~~~p~~~~~--dg~~l~~~~~~~~~--v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l 169 (361)
T 3scy_A 94 TQKTMGADPCYLTT--NGKNIVTANYSGGS--ITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYL 169 (361)
T ss_dssp EEECSSSCEEEEEE--CSSEEEEEETTTTE--EEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEE
T ss_pred EeccCCCCcEEEEE--CCCEEEEEECCCCE--EEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEE
Confidence 34445667788888 7887777764 556 999999754322211 11 12346889999999977
Q ss_pred EEEe-CCCeEEEEEcCCCCc------c------eEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCce--eE
Q psy13969 302 VTAS-RDHLLKVFDIRNLSS------E------VQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKE--VG 366 (877)
Q Consensus 302 ~s~s-~Dg~I~iwd~~~~~~------~------~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~--~~ 366 (877)
++++ .++.|++|++..... . ......+...+..++|+|+++.++++...++.|.+||+.++.. +.
T Consensus 170 ~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~ 249 (361)
T 3scy_A 170 LADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQ 249 (361)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEE
T ss_pred EEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeE
Confidence 6665 488999999876332 1 1222334567889999999986666655789999999986643 22
Q ss_pred Eec--CcCCCCEEEEEEcCCCCEEEEEEcC--CeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccC
Q psy13969 367 CIP--QAHDNIIWTMAWHPLGHILATGSND--HASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMG 442 (877)
Q Consensus 367 ~~~--~~h~~~V~~v~~sp~g~~l~sg~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g 442 (877)
.+. ..+...+.+++|+||+++|+++..+ +.|.+|+++.....+..... +.. ...+..++|++|+.+++++..
T Consensus 250 ~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~---~~~-g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 250 TVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGY---QLT-GIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp EEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEE---EEC-SSCCCEEEECTTSCEEEEEET
T ss_pred EEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeE---ecC-CCCCceEEECCCCCEEEEEEC
Confidence 221 2334567899999999988777765 89999999632222111110 111 124567899999999988876
Q ss_pred CCCeeeecCCCC
Q psy13969 443 LEDEDSVFPSSE 454 (877)
Q Consensus 443 ~d~~~~~~~~~~ 454 (877)
.++.+.+|..+.
T Consensus 326 ~~~~v~v~~~d~ 337 (361)
T 3scy_A 326 DTNVIQIFERDQ 337 (361)
T ss_dssp TTTEEEEEEECT
T ss_pred CCCCEEEEEEEC
Confidence 778888875543
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.79 E-value=1.1e-17 Score=184.73 Aligned_cols=242 Identities=11% Similarity=0.085 Sum_probs=170.2
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CcceEEEccCC--CCeeEEEEcCCCCE--EEEEE-------------CC
Q psy13969 160 CAVRHMVWSHNGLWMVTSDHQGYIKYWQSN-MNNVKTFQGHK--ESIRGISFSPSDSK--FATCS-------------DD 221 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~~dg~v~iwd~~-~~~~~~~~~h~--~~V~~i~~sp~~~~--l~sgs-------------~D 221 (877)
..+..++|+||+++|++++.+ .|.+|+++ ...+..+..|. ..+.+++|+|++++ |++++ .+
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 367889999999999988888 99999975 44433222221 33667899999984 44553 68
Q ss_pred CcEEEEecc-CCeeeEEec----cCCCCeEEEEEcCCCCEEEEEec-CCcccEEEEcCC-CCcee--EEec--cCCCCee
Q psy13969 222 GTVRVWDFY-RCTEEKVLR----GHGADVKCVDWHPYKSLIVSGSK-DNQQPVKLWDPK-AGQAL--ATLH--AHKSTVM 290 (877)
Q Consensus 222 g~I~iwd~~-~~~~~~~l~----~h~~~v~~v~~sp~~~~l~sgs~-dg~~~I~iwd~~-~~~~~--~~~~--~h~~~V~ 290 (877)
+++.+|++. +++....+. .+...+.+++|+|++++|+++.. +.. |++||+. +++.. ..+. .|...+.
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~--v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANK--LWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTE--EEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCE--EEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 999999997 355443333 25567999999999998887764 455 9999998 66543 2333 2456799
Q ss_pred EEEEccCCCeEEEEeC-CCeEEEEEcCCC-Ccce---EEEec-------CCC------CeEEEE-EcCCCCcEEEEEeCC
Q psy13969 291 DLAWNQNGNWLVTASR-DHLLKVFDIRNL-SSEV---QTFRG-------HKK------EASAVA-WHPQHEGLFSSGGAD 351 (877)
Q Consensus 291 ~l~~sp~g~~l~s~s~-Dg~I~iwd~~~~-~~~~---~~~~~-------h~~------~v~~i~-~~p~~~~~l~sgs~d 351 (877)
.++|+|++++|++++. +++|.+|++... .... ..+.. |.. .+..++ |+|+++.++++...+
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 9999999999888775 789999987531 2221 12221 122 488999 999999655544333
Q ss_pred C-----cEEEEEcC-CCceeEE--ecCcCCCCEEEEEEcC---CCCEEEEEEcC-CeEEEEeCCC
Q psy13969 352 G-----SIMFWHVG-ADKEVGC--IPQAHDNIIWTMAWHP---LGHILATGSND-HASKFWTRNR 404 (877)
Q Consensus 352 g-----~I~iwd~~-~~~~~~~--~~~~h~~~V~~v~~sp---~g~~l~sg~~d-g~v~iwd~~~ 404 (877)
. +|.+|++. +++.... +...+...+..++|+| ++++|++++.+ +.|.||+++.
T Consensus 277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred CCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 3 89999996 4543321 1123444567899999 89999998865 8999999864
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.79 E-value=1.2e-18 Score=210.81 Aligned_cols=274 Identities=10% Similarity=0.077 Sum_probs=183.6
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEccCCC----CeeEEEEcCCCCEEEEEEC---------CCcEEEEecc
Q psy13969 164 HMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKE----SIRGISFSPSDSKFATCSD---------DGTVRVWDFY 230 (877)
Q Consensus 164 ~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~----~V~~i~~sp~~~~l~sgs~---------Dg~I~iwd~~ 230 (877)
+++|++|+++++ .+.|+.|++||+.+.....+..+.. .|.+++||||+++|++++. |++|++||+.
T Consensus 20 ~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 567888885444 4569999999998877666554432 3899999999999999886 7899999998
Q ss_pred CCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEe-ccCCCCe-----------------eEE
Q psy13969 231 RCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATL-HAHKSTV-----------------MDL 292 (877)
Q Consensus 231 ~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~-~~h~~~V-----------------~~l 292 (877)
+++.+.... ....+.+++||||++.|++++ ++. |++||+.+++..... ..+...| .++
T Consensus 99 ~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~--i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 99 NGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNN--IYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTE--EEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred CCcccccee-cCcccccceECCCCCEEEEEE-CCe--EEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 887621111 135688999999999999886 566 999999888765432 2222222 589
Q ss_pred EEccCCCeEEEEeCCC----------------------------------eEEEEEcCCCCcce---E-----EEecCCC
Q psy13969 293 AWNQNGNWLVTASRDH----------------------------------LLKVFDIRNLSSEV---Q-----TFRGHKK 330 (877)
Q Consensus 293 ~~sp~g~~l~s~s~Dg----------------------------------~I~iwd~~~~~~~~---~-----~~~~h~~ 330 (877)
+||||+++||+++.|. .|++||+... ..+ . .+..|..
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~-~~~~~~~~~~~~~~~~~~~ 253 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYP-AYVGPQEVPVPAMIASSDY 253 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCH-HHHCCEECCCCHHHHTSCE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCC-CccceeEccCCccCCCCcc
Confidence 9999999999988652 7889999873 321 1 1235778
Q ss_pred CeEEEEEcCCCCcEEEEEeCC----CcEEEEE----cCCCceeEEec---CcCCCCEE-----EEEEcCCCCEEEE--EE
Q psy13969 331 EASAVAWHPQHEGLFSSGGAD----GSIMFWH----VGADKEVGCIP---QAHDNIIW-----TMAWHPLGHILAT--GS 392 (877)
Q Consensus 331 ~v~~i~~~p~~~~~l~sgs~d----g~I~iwd----~~~~~~~~~~~---~~h~~~V~-----~v~~sp~g~~l~s--g~ 392 (877)
.+.+++|+|++. ++++.... ..|.+|| +.+++....+. ..|...|. +++|+||++.|+. ..
T Consensus 254 ~~~~~~~SpD~~-~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 332 (719)
T 1z68_A 254 YFSWLTWVTDER-VCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSD 332 (719)
T ss_dssp EEEEEEESSSSE-EEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEEC
T ss_pred eEEEeEEeCCCe-EEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEc
Confidence 899999999965 66664332 2488899 76665543331 35666666 7899999985544 44
Q ss_pred cCCe--EEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCC----CCeeeecCCC
Q psy13969 393 NDHA--SKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGL----EDEDSVFPSS 453 (877)
Q Consensus 393 ~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~----d~~~~~~~~~ 453 (877)
.++. |.+|++.... ... +......+..+.+. ++..++..+.. .....+|...
T Consensus 333 ~~g~~~l~~~~~~~~~--~~~------lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 333 KDGYKHIHYIKDTVEN--AIQ------ITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp TTSCEEEEEESSCSTT--CEE------CSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred cCCceEEEEEECCCCc--eEe------cccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 5564 5566654321 111 11111123344444 66666665543 3556666543
No 161
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.77 E-value=7.9e-16 Score=163.37 Aligned_cols=252 Identities=12% Similarity=0.135 Sum_probs=188.6
Q ss_pred eEEEEEccCCceeeccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEc------cCCCCeeEEEEc-CCCCEEE
Q psy13969 144 IFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQ------GHKESIRGISFS-PSDSKFA 216 (877)
Q Consensus 144 i~~~~~sp~g~~l~h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~------~h~~~V~~i~~s-p~~~~l~ 216 (877)
++.+.|-..+..-.+-..+.+|+++++++++++...++.|.+|+.+...+..+. .|...+.+|+++ +++++++
T Consensus 14 ~~~~~~g~~g~~~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v 93 (286)
T 1q7f_A 14 IYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIV 93 (286)
T ss_dssp CEEEEECCBSSSTTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEE
T ss_pred EEEEeccCCCCCCCccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEE
Confidence 445566555555566778999999999998888889999999998866665553 244578999994 6666555
Q ss_pred EEEC-CCcEEEEeccCCeeeEEec-cCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEec--cCCCCeeEE
Q psy13969 217 TCSD-DGTVRVWDFYRCTEEKVLR-GHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLH--AHKSTVMDL 292 (877)
Q Consensus 217 sgs~-Dg~I~iwd~~~~~~~~~l~-~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~--~h~~~V~~l 292 (877)
+... ++.|.+|| .+++.+..+. .+...+.+|+++++++++++...++. |++||.. ++.+..+. .+...+..|
T Consensus 94 ~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~--i~~~~~~-g~~~~~~~~~~~~~~p~~i 169 (286)
T 1q7f_A 94 TERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMR--VIIFDQN-GNVLHKFGCSKHLEFPNGV 169 (286)
T ss_dssp EECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTE--EEEECTT-SCEEEEEECTTTCSSEEEE
T ss_pred EcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCE--EEEEcCC-CCEEEEeCCCCccCCcEEE
Confidence 5543 78999999 4666666654 34467899999999998877777777 9999964 55555553 345678999
Q ss_pred EEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecC--CCCeEEEEEcCCCCcEEEEEeCCC-cEEEEEcCCCceeEEec
Q psy13969 293 AWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGH--KKEASAVAWHPQHEGLFSSGGADG-SIMFWHVGADKEVGCIP 369 (877)
Q Consensus 293 ~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h--~~~v~~i~~~p~~~~~l~sgs~dg-~I~iwd~~~~~~~~~~~ 369 (877)
+++++++++++.+.++.|++||... ..+..+..+ ...+..|++++++. ++++...++ .|.+||.. ++.+..+.
T Consensus 170 ~~~~~g~l~v~~~~~~~i~~~~~~g--~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~-g~~~~~~~ 245 (286)
T 1q7f_A 170 VVNDKQEIFISDNRAHCVKVFNYEG--QYLRQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQD-GQLISALE 245 (286)
T ss_dssp EECSSSEEEEEEGGGTEEEEEETTC--CEEEEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTT-SCEEEEEE
T ss_pred EECCCCCEEEEECCCCEEEEEcCCC--CEEEEEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECCC-CCEEEEEc
Confidence 9999999888888899999999754 445555433 36789999999986 777777776 99999964 45555542
Q ss_pred C-cCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 370 Q-AHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 370 ~-~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
. .....+.+++|+++++++++ +.|+.|++|++..
T Consensus 246 ~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 246 SKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp ESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred ccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 2 22335889999999987776 6799999999854
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.76 E-value=3.2e-17 Score=182.26 Aligned_cols=275 Identities=11% Similarity=0.060 Sum_probs=189.0
Q ss_pred EEEcCCCCEEEEEeC-CC--eEEEEeCCCcceEEEcc-CCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEecc
Q psy13969 165 MVWSHNGLWMVTSDH-QG--YIKYWQSNMNNVKTFQG-HKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRG 240 (877)
Q Consensus 165 l~~spd~~~l~sg~~-dg--~v~iwd~~~~~~~~~~~-h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~ 240 (877)
++||||+++|++.+. ++ .|.+||+.+.....+.. |...+.+++|+||+++|++++.+..|++||+.+++....+..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 789999998888776 66 48888888777665554 444555789999999999999999999999999887777776
Q ss_pred CCCCeEEEE--EcCCCCEEEEEe----------------------cCCcccEEEEcCCCCceeEEeccCCCCeeEEEEcc
Q psy13969 241 HGADVKCVD--WHPYKSLIVSGS----------------------KDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQ 296 (877)
Q Consensus 241 h~~~v~~v~--~sp~~~~l~sgs----------------------~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp 296 (877)
+...+.... +++++.+|+... .+.. |++||+.+++. ..+..+...+..++|+|
T Consensus 121 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~d~~~g~~-~~l~~~~~~~~~~~~sp 197 (388)
T 3pe7_A 121 PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCR--LMRVDLKTGES-TVILQENQWLGHPIYRP 197 (388)
T ss_dssp CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEE--EEEEETTTCCE-EEEEEESSCEEEEEEET
T ss_pred hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcce--EEEEECCCCce-EEeecCCccccccEECC
Confidence 666565444 488998887532 2234 99999998864 44445677899999999
Q ss_pred -CCCeEEEEeCC------CeEEEEEcCCCCcceEEEecCC--CCeEEEEEcCCCCcEEEEEeCCC----cEEEEEcCCCc
Q psy13969 297 -NGNWLVTASRD------HLLKVFDIRNLSSEVQTFRGHK--KEASAVAWHPQHEGLFSSGGADG----SIMFWHVGADK 363 (877)
Q Consensus 297 -~g~~l~s~s~D------g~I~iwd~~~~~~~~~~~~~h~--~~v~~i~~~p~~~~~l~sgs~dg----~I~iwd~~~~~ 363 (877)
++++|+.++.+ ..|.++|+.. .....+..+. ..+..++|+|+++.++++...++ .|++||+.+++
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~--~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDG--TNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLE 275 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTS--CCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCC
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCC--CceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCc
Confidence 99999888763 3678888765 3344444444 35788999999997655544333 39999998876
Q ss_pred eeEEec-CcCCCC---EEEEEEcCCCCEEEEE---------EcCCeEEEEeCCCCCCCcccccccCCcceeee-------
Q psy13969 364 EVGCIP-QAHDNI---IWTMAWHPLGHILATG---------SNDHASKFWTRNRLGDPMRDRYNQKGLAHCIT------- 423 (877)
Q Consensus 364 ~~~~~~-~~h~~~---V~~v~~sp~g~~l~sg---------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~------- 423 (877)
...... ..+... +..++|+||++.|+.. ..+..|++||+.... +.. +..+..
T Consensus 276 ~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~------l~~~~~~~~~~~~ 347 (388)
T 3pe7_A 276 NRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT--QHR------VARHDTSWKVFEG 347 (388)
T ss_dssp EEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE--EEE------EEECCCCCCCBTT
T ss_pred eEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc--eEE------eccccCccccccc
Confidence 432211 111000 1113799999877754 445689999987521 111 111111
Q ss_pred ----eeeeeeccCCCCeEEeccCCCCeeeecCC
Q psy13969 424 ----GVYNEEMELNDSAVIPGMGLEDEDSVFPS 452 (877)
Q Consensus 424 ----~v~~~~~~~d~~~l~~~~g~d~~~~~~~~ 452 (877)
.+....|++|+..|+..+..+....+|..
T Consensus 348 ~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 348 DRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp BSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred ccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 35677899999999887766666666643
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.74 E-value=2.9e-16 Score=173.30 Aligned_cols=275 Identities=11% Similarity=0.065 Sum_probs=180.8
Q ss_pred EEEEeCC--CeEEEEeC--CCcceEEEc----cCCCCeeEEEEcCCCCEEEEEECCCcEEEEecc-CCeeeEEeccC-CC
Q psy13969 174 MVTSDHQ--GYIKYWQS--NMNNVKTFQ----GHKESIRGISFSPSDSKFATCSDDGTVRVWDFY-RCTEEKVLRGH-GA 243 (877)
Q Consensus 174 l~sg~~d--g~v~iwd~--~~~~~~~~~----~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~-~~~~~~~l~~h-~~ 243 (877)
|+.+++. +.|++|++ .+..+..+. .+...+..++|+|++++|++++.+ .|.+||+. +++........ ..
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g 83 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGG 83 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCS
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCC
Confidence 4555543 46777764 344443332 234568899999999999999988 99999997 66654433211 12
Q ss_pred CeEEEEEcCCCCE--EEEEe-------------cCCcccEEEEcCC-CCceeEEec----cCCCCeeEEEEccCCCeEEE
Q psy13969 244 DVKCVDWHPYKSL--IVSGS-------------KDNQQPVKLWDPK-AGQALATLH----AHKSTVMDLAWNQNGNWLVT 303 (877)
Q Consensus 244 ~v~~v~~sp~~~~--l~sgs-------------~dg~~~I~iwd~~-~~~~~~~~~----~h~~~V~~l~~sp~g~~l~s 303 (877)
.+.+++|+|++++ +++++ .++. +.+|++. +++....+. .+...+.+++|+|++++|++
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~--v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~ 161 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGY--GNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYS 161 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCE--EEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCce--EEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEE
Confidence 3667899999984 44543 5776 9999997 455544433 24568999999999998887
Q ss_pred EeC-CCeEEEEEcC-CCCc-ceEEEe--cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcC--CCcee---EEec--C-
Q psy13969 304 ASR-DHLLKVFDIR-NLSS-EVQTFR--GHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVG--ADKEV---GCIP--Q- 370 (877)
Q Consensus 304 ~s~-Dg~I~iwd~~-~~~~-~~~~~~--~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~--~~~~~---~~~~--~- 370 (877)
+.. +..|++||+. +... .+..+. .|...+..++|+|+++.++++...++.|.+|++. +++.. ..+. .
T Consensus 162 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 162 ADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred EcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC
Confidence 764 6799999997 4221 122333 2456799999999998555555457899999875 44432 1121 1
Q ss_pred ---cCCC------CEEEEE-EcCCCCEEEEEEcCC------eEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccC--
Q psy13969 371 ---AHDN------IIWTMA-WHPLGHILATGSNDH------ASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMEL-- 432 (877)
Q Consensus 371 ---~h~~------~V~~v~-~sp~g~~l~sg~~dg------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-- 432 (877)
.|.. .+..++ |+||+++|++++.+. .|.+|+++..+.. ..... .+.........++|++
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~-~~~~~--~~~~~~~~~~~~a~sp~~ 318 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSI-EKQLF--LSPTPTSGGHSNAVSPCP 318 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCE-EEEEE--EEECSSCCTTCCCEEECT
T ss_pred CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCE-EEeee--eeecCCCCcccceecCCC
Confidence 1222 588999 999999888776533 8999999632221 11000 0001122345677888
Q ss_pred -CCCeEEeccCCCCeeeecCCCC
Q psy13969 433 -NDSAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 433 -d~~~l~~~~g~d~~~~~~~~~~ 454 (877)
|+.+++++...++.+.+|....
T Consensus 319 ~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 319 WSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp TCTTEEEEECSSSCEEEEEEEET
T ss_pred cCCCEEEEEEcCCCeEEEEEEch
Confidence 7899988766668899997654
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.72 E-value=2.3e-15 Score=163.57 Aligned_cols=239 Identities=12% Similarity=0.091 Sum_probs=180.9
Q ss_pred CCEEEEEEcCCCCEEEEEeCC------------------------CeEEEEeCCCcceEEEc--cCCCCeeEEEEcCCCC
Q psy13969 160 CAVRHMVWSHNGLWMVTSDHQ------------------------GYIKYWQSNMNNVKTFQ--GHKESIRGISFSPSDS 213 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~~d------------------------g~v~iwd~~~~~~~~~~--~h~~~V~~i~~sp~~~ 213 (877)
..|.+|+++++++++++...+ +.|.+||.++..+.... .+-.....|+++++++
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 567888888888888877766 47999998755544332 3445789999999999
Q ss_pred EEEEEECCCcEEEEeccCCe-eeEEe---------ccCCCCeEEEEEcC-CCCEEEEEe-cCCcccEEEEcCCCCceeEE
Q psy13969 214 KFATCSDDGTVRVWDFYRCT-EEKVL---------RGHGADVKCVDWHP-YKSLIVSGS-KDNQQPVKLWDPKAGQALAT 281 (877)
Q Consensus 214 ~l~sgs~Dg~I~iwd~~~~~-~~~~l---------~~h~~~v~~v~~sp-~~~~l~sgs-~dg~~~I~iwd~~~~~~~~~ 281 (877)
++++.+.++.|++||..... .+..+ ..+......|+|++ ++.++++.+ .++. |++|| .+++.+..
T Consensus 104 l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~--I~~~~-~~g~~~~~ 180 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSR--IVQFS-PSGKFVTQ 180 (329)
T ss_dssp EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCE--EEEEC-TTSCEEEE
T ss_pred EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCe--EEEEc-CCCCEEEE
Confidence 88888889999999985432 45555 34455789999999 777777776 5777 99999 56776666
Q ss_pred ecc----------CCCCeeEEEEccC-CCeEEEEeCCCeEEEEEcCCCCcceEEEe--cCCCCeEEEEEcCCCCcEEEEE
Q psy13969 282 LHA----------HKSTVMDLAWNQN-GNWLVTASRDHLLKVFDIRNLSSEVQTFR--GHKKEASAVAWHPQHEGLFSSG 348 (877)
Q Consensus 282 ~~~----------h~~~V~~l~~sp~-g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~--~h~~~v~~i~~~p~~~~~l~sg 348 (877)
+.. +......|+++++ ++++++...++.|++||..+ ...+..+. .+...+.+++|+| +. ++++.
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~p-g~-~~~~~ 257 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT-KEFVREIKHASFGRNVFAISYIP-GF-LFAVN 257 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT-CCEEEEECCTTTTTCEEEEEEET-TE-EEEEE
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC-CcEEEEEeccccCCCcceeeecC-CE-EEEeC
Confidence 642 2234889999998 77777778899999999985 45566653 4566788999999 22 33332
Q ss_pred -------eCCCcEEEEEcCCCceeEEec--CcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 349 -------GADGSIMFWHVGADKEVGCIP--QAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 349 -------s~dg~I~iwd~~~~~~~~~~~--~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
+.+..|++||+.+++.+..+. ..+...+..|+|++++.++++...++.|++|++..
T Consensus 258 g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 258 GKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 234589999999998887763 35667799999999998888888899999999854
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.71 E-value=3.5e-16 Score=189.57 Aligned_cols=237 Identities=11% Similarity=0.122 Sum_probs=166.8
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceE-EEccCCCC-----eeEEEEcCCCCEEEEEECC---------CcEEE
Q psy13969 162 VRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVK-TFQGHKES-----IRGISFSPSDSKFATCSDD---------GTVRV 226 (877)
Q Consensus 162 V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~-~~~~h~~~-----V~~i~~sp~~~~l~sgs~D---------g~I~i 226 (877)
..+++|++|+++|+++ |+.|++||+.+.... .+..|... ..+++||||+++|++++.+ +.+.|
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~ 96 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEE
Confidence 4567888888888876 899999998876544 45555532 2458999999999999876 56679
Q ss_pred EeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEe-ccCCCCe----------------
Q psy13969 227 WDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATL-HAHKSTV---------------- 289 (877)
Q Consensus 227 wd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~-~~h~~~V---------------- 289 (877)
||+.+++.. .+..|...+..++||||++.||.++ ++. |++||+.+++..... .++...+
T Consensus 97 ~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~--i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 97 YDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NND--IYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp EETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTE--EEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred EECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCe--EEEEECCCCceEEEcCCCCccceecCcccccccchhcCC
Confidence 999988754 4666778899999999999998885 566 999999887754322 2222222
Q ss_pred -eEEEEccCCCeEEEEeCCC------------------------------------eEEEEEcCC---CCc-ceEEEe--
Q psy13969 290 -MDLAWNQNGNWLVTASRDH------------------------------------LLKVFDIRN---LSS-EVQTFR-- 326 (877)
Q Consensus 290 -~~l~~sp~g~~l~s~s~Dg------------------------------------~I~iwd~~~---~~~-~~~~~~-- 326 (877)
..+.||||+++||..+.|. +|+|||+.+ ... ....+.
T Consensus 173 ~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~ 252 (740)
T 4a5s_A 173 YSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAP 252 (740)
T ss_dssp SBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCC
T ss_pred CcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCC
Confidence 3589999999999886432 478888876 321 233343
Q ss_pred ----cCCCCeEEEEEcCCCCcEEEEEeC---CCcEEEEEcCCCc----eeE---EecCcCCCCEE-----EEEEcCCCCE
Q psy13969 327 ----GHKKEASAVAWHPQHEGLFSSGGA---DGSIMFWHVGADK----EVG---CIPQAHDNIIW-----TMAWHPLGHI 387 (877)
Q Consensus 327 ----~h~~~v~~i~~~p~~~~~l~sgs~---dg~I~iwd~~~~~----~~~---~~~~~h~~~V~-----~v~~sp~g~~ 387 (877)
.|...+..++|+|+++.+++.... +..|++||+.+++ +.. .+...|...|. +++|+||++.
T Consensus 253 ~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~ 332 (740)
T 4a5s_A 253 ASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNS 332 (740)
T ss_dssp HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSE
T ss_pred ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCE
Confidence 277789999999999843333322 2379999998876 221 11134554444 7899999987
Q ss_pred EE-EEEc-CC--eEEEEeCCC
Q psy13969 388 LA-TGSN-DH--ASKFWTRNR 404 (877)
Q Consensus 388 l~-sg~~-dg--~v~iwd~~~ 404 (877)
|+ ..+. ++ .|++||+..
T Consensus 333 l~~~~s~~~G~~~l~~~~~~~ 353 (740)
T 4a5s_A 333 FYKIISNEEGYRHICYFQIDK 353 (740)
T ss_dssp EEEEEECTTSCEEEEEEETTC
T ss_pred EEEEEEcCCCceEEEEEECCC
Confidence 76 6653 44 577777653
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.70 E-value=5.9e-16 Score=185.21 Aligned_cols=244 Identities=10% Similarity=0.051 Sum_probs=179.0
Q ss_pred eccCCEEEEEEcCCCCEEEEE--eCCCeEEEEe-CCCcceEEEccCCCCee---------EEEEc--CCCCE-EEEEEC-
Q psy13969 157 AHDCAVRHMVWSHNGLWMVTS--DHQGYIKYWQ-SNMNNVKTFQGHKESIR---------GISFS--PSDSK-FATCSD- 220 (877)
Q Consensus 157 ~h~~~V~~l~~spd~~~l~sg--~~dg~v~iwd-~~~~~~~~~~~h~~~V~---------~i~~s--p~~~~-l~sgs~- 220 (877)
.|...|.+++|+++..++++. +.++...||. ........+..|...|. .++|+ ||+++ |+.++.
T Consensus 21 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~ 100 (662)
T 3azo_A 21 SRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFG 100 (662)
T ss_dssp HTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTT
T ss_pred hcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECC
Confidence 477788999999876666666 5578899998 44566777777877766 66676 99988 776654
Q ss_pred CCcEEEEecc--CCeeeEEecc-----CCCCeEEEEEcCCCCEEEEEecCC--------cccEEEEcCCC------Ccee
Q psy13969 221 DGTVRVWDFY--RCTEEKVLRG-----HGADVKCVDWHPYKSLIVSGSKDN--------QQPVKLWDPKA------GQAL 279 (877)
Q Consensus 221 Dg~I~iwd~~--~~~~~~~l~~-----h~~~v~~v~~sp~~~~l~sgs~dg--------~~~I~iwd~~~------~~~~ 279 (877)
+..|++|++. .......+.. |...+.+++|+||++.|++++.+. ...|++||+.+ ++ +
T Consensus 101 ~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~ 179 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA-V 179 (662)
T ss_dssp TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG-S
T ss_pred CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc-e
Confidence 5567777764 2034555555 667889999999999999888761 12399999987 44 4
Q ss_pred EEec-cCCCCeeEEEEccCCCeEEEEeCC--------CeEEEEEcCCCC---cceEEEecCCCCeEEEEEcCCCCcEEEE
Q psy13969 280 ATLH-AHKSTVMDLAWNQNGNWLVTASRD--------HLLKVFDIRNLS---SEVQTFRGHKKEASAVAWHPQHEGLFSS 347 (877)
Q Consensus 280 ~~~~-~h~~~V~~l~~sp~g~~l~s~s~D--------g~I~iwd~~~~~---~~~~~~~~h~~~v~~i~~~p~~~~~l~s 347 (877)
..+. .+...+.+++||||+++|++++.+ ..|++||+.... ........|...+..++|+|+++ ++++
T Consensus 180 ~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~ 258 (662)
T 3azo_A 180 RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVA 258 (662)
T ss_dssp EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEE
T ss_pred eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEE
Confidence 5565 666788999999999999988855 379999998313 33344445678899999999999 8888
Q ss_pred EeCCC--cEEEEEcCCCceeEEecCcCCCC--------EEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 348 GGADG--SIMFWHVGADKEVGCIPQAHDNI--------IWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 348 gs~dg--~I~iwd~~~~~~~~~~~~~h~~~--------V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
++.++ .|++||+.+++....+ ..+... +.+++|+++++++++++. +.++||.++.
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~l~-~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~ 323 (662)
T 3azo_A 259 TDRTGWWNLHRVDPATGAATQLC-RREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDP 323 (662)
T ss_dssp ECTTSSCEEEEECTTTCCEEESS-CCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEET
T ss_pred ECCCCCeEEEEEECCCCceeecc-cccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEEC
Confidence 88888 5666666555543322 222222 567999999999999998 9999996553
No 167
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.70 E-value=2.8e-16 Score=174.75 Aligned_cols=281 Identities=9% Similarity=0.039 Sum_probs=184.8
Q ss_pred CCEEEEEEcCCCCEEEEEeCC---CeEEEEeCCCcceEEEccCCCCee-EEEEcCCCCEEEEEECCCcEEEEeccCCeee
Q psy13969 160 CAVRHMVWSHNGLWMVTSDHQ---GYIKYWQSNMNNVKTFQGHKESIR-GISFSPSDSKFATCSDDGTVRVWDFYRCTEE 235 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~~d---g~v~iwd~~~~~~~~~~~h~~~V~-~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~ 235 (877)
..+.+++||||+++|+..... ..|++|++.+.....+..+...+. .+.|+||+++|++++.+..|++||+.+++..
T Consensus 36 ~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~ 115 (396)
T 3c5m_A 36 NYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQ 115 (396)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred eeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcE
Confidence 346677899999988766443 478888988877766665555443 4889999999999999999999999887766
Q ss_pred EEeccCCCCeEE-------------------EEEcCCCCEEEEEe-----cCCcccEEEEcCCCCceeEEeccCCCCeeE
Q psy13969 236 KVLRGHGADVKC-------------------VDWHPYKSLIVSGS-----KDNQQPVKLWDPKAGQALATLHAHKSTVMD 291 (877)
Q Consensus 236 ~~l~~h~~~v~~-------------------v~~sp~~~~l~sgs-----~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~ 291 (877)
..+..+...... ++|+|+++.++... .+.. |++||+.+++..... .+...+..
T Consensus 116 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~--l~~~d~~~g~~~~~~-~~~~~~~~ 192 (396)
T 3c5m_A 116 VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCR--LIKVDIETGELEVIH-QDTAWLGH 192 (396)
T ss_dssp EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEE--EEEEETTTCCEEEEE-EESSCEEE
T ss_pred EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcce--EEEEECCCCcEEeec-cCCccccc
Confidence 555544443222 35677777665442 3344 999999987755444 56778999
Q ss_pred EEEcc-CCCeEEEEeCC------CeEEEEEcCCCCcceEEEecC--CCCeEEEEEcCCCCcEEEEEeCC----CcEEEEE
Q psy13969 292 LAWNQ-NGNWLVTASRD------HLLKVFDIRNLSSEVQTFRGH--KKEASAVAWHPQHEGLFSSGGAD----GSIMFWH 358 (877)
Q Consensus 292 l~~sp-~g~~l~s~s~D------g~I~iwd~~~~~~~~~~~~~h--~~~v~~i~~~p~~~~~l~sgs~d----g~I~iwd 358 (877)
+.|+| ++..|+.++.+ ..|.+||+.. .....+..+ ...+..++|+|++..++++...+ +.|++||
T Consensus 193 ~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~--~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 270 (396)
T 3c5m_A 193 PIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDG--SNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKAN 270 (396)
T ss_dssp EEEETTEEEEEEEEECSCSSSCSCCCEEEETTS--CCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEEC
T ss_pred ceECCCCCCEEEEEecCCCCCCCceEEEEECCC--CceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEE
Confidence 99999 78877777653 3588888865 223333333 23578899999998665554432 3499999
Q ss_pred cCCCceeEEecCcCCCCEEEEEEcC-CCCEEEEEE----------------cCCeEEEEeCCCCCCCcccccccCC-c--
Q psy13969 359 VGADKEVGCIPQAHDNIIWTMAWHP-LGHILATGS----------------NDHASKFWTRNRLGDPMRDRYNQKG-L-- 418 (877)
Q Consensus 359 ~~~~~~~~~~~~~h~~~V~~v~~sp-~g~~l~sg~----------------~dg~v~iwd~~~~~~~~~~~~~~~~-~-- 418 (877)
+.+++..... . .. .+. ++|++ ++++|++++ .+..|++||+..... ........ +
T Consensus 271 ~~~g~~~~l~-~-~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~l~~~~~~~~~ 344 (396)
T 3c5m_A 271 PETLENEEVM-V-MP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA--QKLCKHSTSWDV 344 (396)
T ss_dssp TTTCCEEEEE-E-CC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC--CEEEECCCCCCC
T ss_pred CCCCCeEEee-e-CC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce--EEccCCCCcccc
Confidence 9887654332 1 11 233 89999 999888765 246899999865321 11100000 0
Q ss_pred --ceeeeeeeeeeccCCCCeEEeccCCCCeeeecC
Q psy13969 419 --AHCITGVYNEEMELNDSAVIPGMGLEDEDSVFP 451 (877)
Q Consensus 419 --~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~ 451 (877)
......+....|++|+..|+..+..+....+|.
T Consensus 345 ~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~ 379 (396)
T 3c5m_A 345 LDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYI 379 (396)
T ss_dssp BTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred ccccccCCCCCceEccCCCeEEEEecCCCCceEEE
Confidence 000001345678999988887765555555553
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.70 E-value=8.2e-16 Score=186.32 Aligned_cols=275 Identities=8% Similarity=0.078 Sum_probs=180.8
Q ss_pred EEEEEcCCCCEEEEEeCC---------CeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCe
Q psy13969 163 RHMVWSHNGLWMVTSDHQ---------GYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCT 233 (877)
Q Consensus 163 ~~l~~spd~~~l~sg~~d---------g~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~ 233 (877)
..++||||+++|++++.+ +.+++||+.+..+..+..|...+..++||||+++||.++ |+.|++||+.+++
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~ 143 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLP 143 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSC
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCc
Confidence 458999999999988775 667799999988888888889999999999999999886 6799999998776
Q ss_pred eeEEe-ccCCCCe-----------------EEEEEcCCCCEEEEEecCCc------------------------------
Q psy13969 234 EEKVL-RGHGADV-----------------KCVDWHPYKSLIVSGSKDNQ------------------------------ 265 (877)
Q Consensus 234 ~~~~l-~~h~~~v-----------------~~v~~sp~~~~l~sgs~dg~------------------------------ 265 (877)
..+.. .++...+ .+++||||+++||..+.|..
T Consensus 144 ~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~ 223 (740)
T 4a5s_A 144 SYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGA 223 (740)
T ss_dssp CEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTS
T ss_pred eEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcC
Confidence 54322 1222222 35899999999998764321
Q ss_pred ----ccEEEEcCCC---Cc--eeEEec------cCCCCeeEEEEccCCCeEEEEeC----CCeEEEEEcCCCC-------
Q psy13969 266 ----QPVKLWDPKA---GQ--ALATLH------AHKSTVMDLAWNQNGNWLVTASR----DHLLKVFDIRNLS------- 319 (877)
Q Consensus 266 ----~~I~iwd~~~---~~--~~~~~~------~h~~~V~~l~~sp~g~~l~s~s~----Dg~I~iwd~~~~~------- 319 (877)
..|++||+.+ ++ ....+. .|...|..++|+||+++++.... +..|++||+.+..
T Consensus 224 ~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~ 303 (740)
T 4a5s_A 224 VNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLV 303 (740)
T ss_dssp CCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECG
T ss_pred cCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeE
Confidence 1488899988 73 233443 27778999999999997766543 3369999998743
Q ss_pred cceEEEecCCCCeE-----EEEEcCCCCcEEEEEe-CCC--cEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEE-EE
Q psy13969 320 SEVQTFRGHKKEAS-----AVAWHPQHEGLFSSGG-ADG--SIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHIL-AT 390 (877)
Q Consensus 320 ~~~~~~~~h~~~v~-----~i~~~p~~~~~l~sgs-~dg--~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l-~s 390 (877)
........|...|. .++|+|+++.+++..+ .++ .|++||+...+.. .+. .....|..+.+ .|++.| ++
T Consensus 304 ~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT-~g~~~v~~~~~-~d~~~i~f~ 380 (740)
T 4a5s_A 304 ARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FIT-KGTWEVIGIEA-LTSDYLYYI 380 (740)
T ss_dssp GGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESC-CSSSCEEEEEE-ECSSEEEEE
T ss_pred EEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecc-cCCEEEEEEEE-EeCCEEEEE
Confidence 11111245666655 7899999996663554 444 6888888766544 342 33445665542 235544 44
Q ss_pred EEc----CCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccC
Q psy13969 391 GSN----DHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMG 442 (877)
Q Consensus 391 g~~----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g 442 (877)
++. .+..+||.++..+.....+.. ..+...........|++++.+++..+.
T Consensus 381 ~~~~~~~~~~~~ly~v~~~g~~~~~~lt-~~~~~~~~~~~~~~~S~dg~~~~~~~s 435 (740)
T 4a5s_A 381 SNEYKGMPGGRNLYKIQLIDYTKVTCLS-CELNPERCQYYSVSFSKEAKYYQLRCS 435 (740)
T ss_dssp ESCGGGCTTCBEEEEEETTEEEEEEESS-TTTSTTTBCBEEEEECTTSSEEEEEEC
T ss_pred EecCCCCCceeEEEEEECCCCCcceeec-cccCCCCCceEEEEECCCCCEEEEEeC
Confidence 443 245666665432221110110 000011234667788999887765543
No 169
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.70 E-value=6.9e-16 Score=168.27 Aligned_cols=232 Identities=12% Similarity=0.061 Sum_probs=171.5
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCC-CCeEEEEEcCCCCEEEEE-ecCCcccEEEEcCCCCceeEEe
Q psy13969 205 GISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHG-ADVKCVDWHPYKSLIVSG-SKDNQQPVKLWDPKAGQALATL 282 (877)
Q Consensus 205 ~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~-~~v~~v~~sp~~~~l~sg-s~dg~~~I~iwd~~~~~~~~~~ 282 (877)
.+++++++.++++++.+++|++||+.+++.+..+..+. ..+..++|++++++++++ ..++. |++||+.+++.+..+
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~--i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGD--IYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTE--EEEEETTTTEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCc--EEEEeCCCCcEEEEE
Confidence 45678888899999999999999999998887776443 257899999999866544 45666 999999999887776
Q ss_pred ccCC------CCeeEEEEccCCCeEEEEeCC------------CeEEEEEcCCCC--cceEEEecCCCCeEEEEEcCCCC
Q psy13969 283 HAHK------STVMDLAWNQNGNWLVTASRD------------HLLKVFDIRNLS--SEVQTFRGHKKEASAVAWHPQHE 342 (877)
Q Consensus 283 ~~h~------~~V~~l~~sp~g~~l~s~s~D------------g~I~iwd~~~~~--~~~~~~~~h~~~v~~i~~~p~~~ 342 (877)
..+. ..+.+++|+|++++|++++.+ +.|.+||+.+.. ..+..+. +...+.+++|++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS 160 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc
Confidence 5432 237899999999999999865 899999997621 1223333 344688999999998
Q ss_pred cEEEEEeCCCcEEEEEcCCCceeEEecCcC--------------------------------------------------
Q psy13969 343 GLFSSGGADGSIMFWHVGADKEVGCIPQAH-------------------------------------------------- 372 (877)
Q Consensus 343 ~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h-------------------------------------------------- 372 (877)
+++ ++ ..|++||+.+.+.+..+...+
T Consensus 161 -l~~-~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 236 (349)
T 1jmx_B 161 -LYV-AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 236 (349)
T ss_dssp -EEE-ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEE
T ss_pred -EEE-cc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEE
Confidence 665 33 349999998887766553221
Q ss_pred -----------------CCCEEEEEEcC-CCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCC
Q psy13969 373 -----------------DNIIWTMAWHP-LGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELND 434 (877)
Q Consensus 373 -----------------~~~V~~v~~sp-~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~ 434 (877)
...+.+++|++ ++++|+++ ++.|.+||+.+... ... . .....+..++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~-~~~-~------~~~~~~~~~~~s~dg 306 (349)
T 1jmx_B 237 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKL-IKA-A------NLDHTYYCVAFDKKG 306 (349)
T ss_dssp EEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEE-EEE-E------ECSSCCCEEEECSSS
T ss_pred EEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeE-EEE-E------cCCCCccceEECCCC
Confidence 11355778889 99998888 88999999875321 111 1 111235678899999
Q ss_pred CeEEeccCCCCeeeecCCCC
Q psy13969 435 SAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 435 ~~l~~~~g~d~~~~~~~~~~ 454 (877)
..++++ ..+..+.+|+..+
T Consensus 307 ~~l~~~-~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 307 DKLYLG-GTFNDLAVFNPDT 325 (349)
T ss_dssp SCEEEE-SBSSEEEEEETTT
T ss_pred CEEEEe-cCCCeEEEEeccc
Confidence 888885 5678999998764
No 170
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.69 E-value=5.8e-15 Score=161.22 Aligned_cols=260 Identities=11% Similarity=0.113 Sum_probs=171.7
Q ss_pred CEEEEEEcCCCCEEEEEe---------CCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECC---C--cEEE
Q psy13969 161 AVRHMVWSHNGLWMVTSD---------HQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDD---G--TVRV 226 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~---------~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~D---g--~I~i 226 (877)
.+..++| |+++|+... .+..|++|++.+.....+ ..+.+++||||+++||.++.+ + .|.+
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~ 89 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWV 89 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEE
Confidence 3455555 666665432 356799999888776666 568899999999999988754 2 4888
Q ss_pred EeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecC------------------C-------cccEEEEcCCCCceeEE
Q psy13969 227 WDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKD------------------N-------QQPVKLWDPKAGQALAT 281 (877)
Q Consensus 227 wd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~d------------------g-------~~~I~iwd~~~~~~~~~ 281 (877)
||+.+++.......+ . +.+++|+|+++.|+.++.+ + ...|++||+.+++.+..
T Consensus 90 ~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~ 167 (347)
T 2gop_A 90 ADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEE 167 (347)
T ss_dssp EETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEE
T ss_pred EECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEee
Confidence 898877665554433 3 9999999999988887743 1 12399999998876455
Q ss_pred eccCCCCeeEEEEccCCCeEEEEeCCC-------eEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCC---
Q psy13969 282 LHAHKSTVMDLAWNQNGNWLVTASRDH-------LLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGAD--- 351 (877)
Q Consensus 282 ~~~h~~~V~~l~~sp~g~~l~s~s~Dg-------~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~d--- 351 (877)
+.. . .+..++|+|++ +++++..+. ...||.+.. .. +..+..+ ..+.++ +|++..+++++..+
T Consensus 168 l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~-~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~ 239 (347)
T 2gop_A 168 FEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWED-GK-EEKMFEK-VSFYAV--DSDGERILLYGKPEKKY 239 (347)
T ss_dssp EEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEET-TE-EEEEEEE-ESEEEE--EECSSCEEEEECCSSSC
T ss_pred ecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCC-Cc-eEEeccC-cceeeE--CCCCCEEEEEEccccCC
Confidence 554 4 88999999999 777776542 345554443 33 3444444 445444 89998655554332
Q ss_pred ----CcEEEEEcCCCceeEEecCcCCCCEEE-EEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeee
Q psy13969 352 ----GSIMFWHVGADKEVGCIPQAHDNIIWT-MAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVY 426 (877)
Q Consensus 352 ----g~I~iwd~~~~~~~~~~~~~h~~~V~~-v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~ 426 (877)
..|.+|| +++ ...+...|...|.+ ++|+ ++ ++++++.++.++|| ++ .+.. .. +......+.
T Consensus 240 ~~~~~~l~~~d--~~~-~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~-~g~~-~~------~~~~~~~v~ 305 (347)
T 2gop_A 240 MSEHNKLYIYD--GKE-VMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW-DGEI-KP------IAKGRHWIM 305 (347)
T ss_dssp CCSSCEEEEEC--SSC-EEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EE-SSSE-EE------EECSSSEEE
T ss_pred ccccceEEEEC--CCc-eEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-Ec-CCce-EE------EecCCCeEE
Confidence 3677787 444 33443566777886 9999 88 99999999999999 87 2221 11 111233467
Q ss_pred eeeccCCCCeEEeccCCCCeeeecCC
Q psy13969 427 NEEMELNDSAVIPGMGLEDEDSVFPS 452 (877)
Q Consensus 427 ~~~~~~d~~~l~~~~g~d~~~~~~~~ 452 (877)
++.|++ ..+++.........+|..
T Consensus 306 ~~~~s~--~~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 306 GFDVDE--IVVYLKETATRLRELFTW 329 (347)
T ss_dssp EEEESS--SEEEEEECSSSCCEEEEE
T ss_pred eeeeeC--cEEEEEcCCCChHHheEe
Confidence 777887 455554433333245543
No 171
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.67 E-value=1.8e-14 Score=173.72 Aligned_cols=243 Identities=8% Similarity=-0.034 Sum_probs=176.0
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCc---------
Q psy13969 158 HDCAVRHMVWSHNGLWMVTSDHQG-----YIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGT--------- 223 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l~sg~~dg-----~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~--------- 223 (877)
|...+..++||||+++||.+..++ +|++||+.+........+...+.+++|+||++.|+.++.+..
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~ 202 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET 202 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCcccccccccc
Confidence 334688999999999998765543 899999988766543322233778999999999999998766
Q ss_pred -------EEEEeccCCee--eEEecc--CCCCeEEEEEcCCCCEEEEEec-----CCcccEEEEcCCC------Cc-eeE
Q psy13969 224 -------VRVWDFYRCTE--EKVLRG--HGADVKCVDWHPYKSLIVSGSK-----DNQQPVKLWDPKA------GQ-ALA 280 (877)
Q Consensus 224 -------I~iwd~~~~~~--~~~l~~--h~~~v~~v~~sp~~~~l~sgs~-----dg~~~I~iwd~~~------~~-~~~ 280 (877)
|++|++.+... ...+.. |...+.+++|+||+++|+..+. +.. |++||+.+ +. .+.
T Consensus 203 ~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~--l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 203 STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNR--LWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCE--EEEEEGGGSSSSSCSSCCCE
T ss_pred ccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccE--EEEEECcccccccCCccceE
Confidence 99999987653 223332 4556889999999999888775 344 99999986 43 456
Q ss_pred EeccCCCCeeEEEEccCCCeEEEEeCCC----eEEEEEcCCCCc-ceEEEecCCC--CeEEEEEcCCCCcEEEEEeCCCc
Q psy13969 281 TLHAHKSTVMDLAWNQNGNWLVTASRDH----LLKVFDIRNLSS-EVQTFRGHKK--EASAVAWHPQHEGLFSSGGADGS 353 (877)
Q Consensus 281 ~~~~h~~~V~~l~~sp~g~~l~s~s~Dg----~I~iwd~~~~~~-~~~~~~~h~~--~v~~i~~~p~~~~~l~sgs~dg~ 353 (877)
.+..+...+.. .|++++..|+..+.+. .|.+||+..... ....+..|.. .+..++|++++ .++++...|+.
T Consensus 281 ~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~lv~~~~~~g~ 358 (710)
T 2xdw_A 281 KLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSN-FLVLCYLHDVK 358 (710)
T ss_dssp EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTT-EEEEEEEETTE
T ss_pred EeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCC-EEEEEEEECCE
Confidence 66666666655 4888888888776543 599999976431 2355555544 67889998554 48888888874
Q ss_pred --EEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEE-E---cCCeEEEEeCCCC
Q psy13969 354 --IMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATG-S---NDHASKFWTRNRL 405 (877)
Q Consensus 354 --I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg-~---~dg~v~iwd~~~~ 405 (877)
|.+||+.+++.+..+ ..+...|..+++++++..|+.. + ...+|++||+.+.
T Consensus 359 ~~l~~~~~~~g~~~~~l-~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 415 (710)
T 2xdw_A 359 NTLQLHDLATGALLKIF-PLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKE 415 (710)
T ss_dssp EEEEEEETTTCCEEEEE-CCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSS
T ss_pred EEEEEEECCCCCEEEec-CCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 666777677766666 4557778999999998765533 3 2468999998754
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.67 E-value=6.2e-15 Score=160.10 Aligned_cols=271 Identities=9% Similarity=0.042 Sum_probs=187.1
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEecc
Q psy13969 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRG 240 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~ 240 (877)
.|.+++|+++...++....+..+++| .......+..+...+.+++|++++++++++..++.|.+||..+++....+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 84 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTI--TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVS 84 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEE--ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC
T ss_pred ccceeeecCCccceeEEeecccCccc--ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeC
Confidence 35666777776666666778888888 3345566777778889999999999888888899999999987776555545
Q ss_pred CCCCeEEEEEcCCCCEEEEEecC----CcccEEEEcCCCCceeEEec--cCCCCeeEEEEccCCCeEEEEeC------CC
Q psy13969 241 HGADVKCVDWHPYKSLIVSGSKD----NQQPVKLWDPKAGQALATLH--AHKSTVMDLAWNQNGNWLVTASR------DH 308 (877)
Q Consensus 241 h~~~v~~v~~sp~~~~l~sgs~d----g~~~I~iwd~~~~~~~~~~~--~h~~~V~~l~~sp~g~~l~s~s~------Dg 308 (877)
+...+.+++|+++++++++...+ +. |++||..+......+. .+...+.+++++++++++++... .+
T Consensus 85 ~~~~~~~i~~~~dg~l~v~~~~~~~~~~~--i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 162 (333)
T 2dg1_A 85 HKANPAAIKIHKDGRLFVCYLGDFKSTGG--IFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLG 162 (333)
T ss_dssp SSSSEEEEEECTTSCEEEEECTTSSSCCE--EEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCE
T ss_pred CCCCcceEEECCCCcEEEEeCCCCCCCce--EEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCc
Confidence 67789999999999888877665 45 9999998876553432 24467999999999987776654 24
Q ss_pred eEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCC-CceeEEe-------cCcCCCCEEEEE
Q psy13969 309 LLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGA-DKEVGCI-------PQAHDNIIWTMA 380 (877)
Q Consensus 309 ~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~-~~~~~~~-------~~~h~~~V~~v~ 380 (877)
.|..||... ..+..+..+...+..++|++++..++++.+.++.|.+||+.. +..+..+ ...+ ..+..++
T Consensus 163 ~l~~~~~~~--~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~ 239 (333)
T 2dg1_A 163 GVYYVSPDF--RTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCC 239 (333)
T ss_dssp EEEEECTTS--CCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEE
T ss_pred eEEEEeCCC--CEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceE
Confidence 566666543 223333333456789999999886667767788999999964 2222111 0112 4678899
Q ss_pred EcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCc-ceeeeeeeeeeccCCCCeEEecc
Q psy13969 381 WHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGL-AHCITGVYNEEMELNDSAVIPGM 441 (877)
Q Consensus 381 ~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~d~~~l~~~~ 441 (877)
++++++++++...++.|.+||.+ +..+.. +..... ..+...+.+++|++|+..|+++.
T Consensus 240 ~d~~G~l~v~~~~~~~v~~~d~~--g~~~~~-~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~ 298 (333)
T 2dg1_A 240 IDSDDNLYVAMYGQGRVLVFNKR--GYPIGQ-ILIPGRDEGHMLRSTHPQFIPGTNQLIICS 298 (333)
T ss_dssp EBTTCCEEEEEETTTEEEEECTT--SCEEEE-EECTTGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred ECCCCCEEEEEcCCCEEEEECCC--CCEEEE-EEcCCCccccccCcceEEECCCCCEEEEEe
Confidence 99999988888888999999874 222221 111000 01112456777877766665544
No 173
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.67 E-value=2.4e-14 Score=152.80 Aligned_cols=231 Identities=13% Similarity=0.072 Sum_probs=171.0
Q ss_pred CCEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEe
Q psy13969 160 CAVRHMVWSHNGL-WMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVL 238 (877)
Q Consensus 160 ~~V~~l~~spd~~-~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l 238 (877)
....+++|+++++ +++++..++.|++|+.++. ...+..+...+.+|+|+++++++++...++.|.+||..+++....+
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIA 106 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEE
T ss_pred ccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEe
Confidence 4467888888888 6778888999999998887 7777788888999999999998877777789999999777654443
Q ss_pred ccC----CCCeEEEEEcCCCCEEEEEec-----------------CCcccEEEEcCCCCceeEEeccCCCCeeEEEEccC
Q psy13969 239 RGH----GADVKCVDWHPYKSLIVSGSK-----------------DNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQN 297 (877)
Q Consensus 239 ~~h----~~~v~~v~~sp~~~~l~sgs~-----------------dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~ 297 (877)
... ...+.+++++++++++++.+. .+. |+.||.. ++ +..+..+......++|+++
T Consensus 107 ~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~--l~~~~~~-g~-~~~~~~~~~~~~gi~~s~d 182 (296)
T 3e5z_A 107 DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRW--VFRLAPD-GT-LSAPIRDRVKPNGLAFLPS 182 (296)
T ss_dssp CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCE--EEEECTT-SC-EEEEECCCSSEEEEEECTT
T ss_pred eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcE--EEEECCC-CC-EEEeecCCCCCccEEECCC
Confidence 221 234678999999998887321 223 7777765 43 4445556677899999999
Q ss_pred CCeEEEEeCCCeEEEEEcCCCCcc---eEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCC
Q psy13969 298 GNWLVTASRDHLLKVFDIRNLSSE---VQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDN 374 (877)
Q Consensus 298 g~~l~s~s~Dg~I~iwd~~~~~~~---~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~ 374 (877)
+++|++.+.++.|++||+...... ...+..+...+..|++++++. ++++. ++.|.+||.. ++.+..+ ..+..
T Consensus 183 g~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~-g~~~~~~-~~~~~ 257 (296)
T 3e5z_A 183 GNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--GDGVHVLTPD-GDELGRV-LTPQT 257 (296)
T ss_dssp SCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--TTEEEEECTT-SCEEEEE-ECSSC
T ss_pred CCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--CCeEEEECCC-CCEEEEE-ECCCC
Confidence 999877778899999998732222 223333555677899999997 55555 7889999986 5666665 34555
Q ss_pred CEEEEEE-cCCCCEEEEEEcCCeEEEEeC
Q psy13969 375 IIWTMAW-HPLGHILATGSNDHASKFWTR 402 (877)
Q Consensus 375 ~V~~v~~-sp~g~~l~sg~~dg~v~iwd~ 402 (877)
+++++| +++++.|++++.++ |..++.
T Consensus 258 -~~~~~f~~~d~~~L~v~t~~~-l~~~~~ 284 (296)
T 3e5z_A 258 -TSNLCFGGPEGRTLYMTVSTE-FWSIET 284 (296)
T ss_dssp -CCEEEEESTTSCEEEEEETTE-EEEEEC
T ss_pred -ceeEEEECCCCCEEEEEcCCe-EEEEEc
Confidence 899999 58888888888763 333443
No 174
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.66 E-value=7.4e-15 Score=160.36 Aligned_cols=223 Identities=10% Similarity=0.118 Sum_probs=160.4
Q ss_pred CCEEEEEEcCCCCEEEEEeCC---C--eEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECC-------------
Q psy13969 160 CAVRHMVWSHNGLWMVTSDHQ---G--YIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDD------------- 221 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~~d---g--~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~D------------- 221 (877)
..+.+++||||+++|++.+.+ + .|++|++++.....+..+.. +.+++|+||+++|++++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------C
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 467889999999999877643 3 47777887776666655555 9999999999998888743
Q ss_pred --------------CcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCC-------cccEEEEcCCCCceeE
Q psy13969 222 --------------GTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDN-------QQPVKLWDPKAGQALA 280 (877)
Q Consensus 222 --------------g~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg-------~~~I~iwd~~~~~~~~ 280 (877)
..|++||+.+++.+..+.. . .+.+++|+|++ ++++++.+. ...|+++| +++ +.
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~-~~ 211 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGK-EE 211 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTE-EE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCc-eE
Confidence 5799999988776455544 3 78899999999 777776542 31255566 444 34
Q ss_pred EeccCCCCeeEEEEccCCCeEEEEeCC--------CeEEEEEcCCCCcceEEEecCCCCeEE-EEEcCCCCcEEEEEeCC
Q psy13969 281 TLHAHKSTVMDLAWNQNGNWLVTASRD--------HLLKVFDIRNLSSEVQTFRGHKKEASA-VAWHPQHEGLFSSGGAD 351 (877)
Q Consensus 281 ~~~~h~~~V~~l~~sp~g~~l~s~s~D--------g~I~iwd~~~~~~~~~~~~~h~~~v~~-i~~~p~~~~~l~sgs~d 351 (877)
.+..+ ..+.++ +|++++|++.+.+ ..|.+|| . ......+..|...+.. ++|+ ++ ++++++.+
T Consensus 212 ~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~ 282 (347)
T 2gop_A 212 KMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--G-KEVMGILDEVDRGVGQAKIKD-GK--VYFTLFEE 282 (347)
T ss_dssp EEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--S-SCEEESSTTCCSEEEEEEEET-TE--EEEEEEET
T ss_pred EeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--C-CceEeccccCCcccCCccEEc-Cc--EEEEEecC
Confidence 44444 445544 9999999888754 3688888 3 3333334455677886 8998 65 88888999
Q ss_pred CcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeE-EEEeCC
Q psy13969 352 GSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHAS-KFWTRN 403 (877)
Q Consensus 352 g~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v-~iwd~~ 403 (877)
+.++|| +.+++....+ .+...|.+++|++ .++++++.+... .||.++
T Consensus 283 ~~~~l~-~~~g~~~~~~--~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 283 GSVNLY-IWDGEIKPIA--KGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp TEEEEE-EESSSEEEEE--CSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred CcEEEE-EcCCceEEEe--cCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 999999 8755443333 4577899999999 678887777765 777764
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.65 E-value=6.4e-15 Score=163.51 Aligned_cols=259 Identities=12% Similarity=0.022 Sum_probs=173.9
Q ss_pred CCcceEEEccCCCCeeE-----EEEcCCCCEEEEEEC-CC--cEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEE
Q psy13969 189 NMNNVKTFQGHKESIRG-----ISFSPSDSKFATCSD-DG--TVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSG 260 (877)
Q Consensus 189 ~~~~~~~~~~h~~~V~~-----i~~sp~~~~l~sgs~-Dg--~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sg 260 (877)
....+..+..|...+.. .+||||+++|++++. ++ .|.+||+.+++.......+...+.+++|+|+++.|+++
T Consensus 19 ~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~ 98 (388)
T 3pe7_A 19 TGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYV 98 (388)
T ss_dssp TCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEE
T ss_pred CCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEE
Confidence 34556677777765655 889999999999987 66 48889998888777776676666678999999999999
Q ss_pred ecCCcccEEEEcCCCCceeEEeccCCCCeeEEE--EccCCCeEEEEe----------------------CCCeEEEEEcC
Q psy13969 261 SKDNQQPVKLWDPKAGQALATLHAHKSTVMDLA--WNQNGNWLVTAS----------------------RDHLLKVFDIR 316 (877)
Q Consensus 261 s~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~--~sp~g~~l~s~s----------------------~Dg~I~iwd~~ 316 (877)
+.+.. |++||+.+++....+..+...+.... +++++.+|+... .+..|++||+.
T Consensus 99 ~~~~~--l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 176 (388)
T 3pe7_A 99 KDGRN--LMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK 176 (388)
T ss_dssp ETTTE--EEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT
T ss_pred eCCCe--EEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECC
Confidence 98887 99999999887766666666565444 488998887532 34679999998
Q ss_pred CCCcceEEEecCCCCeEEEEEcC-CCCcEEEEEeC-----CCcEEEEEcCCCceeEEecCcCC-CCEEEEEEcCCCCEEE
Q psy13969 317 NLSSEVQTFRGHKKEASAVAWHP-QHEGLFSSGGA-----DGSIMFWHVGADKEVGCIPQAHD-NIIWTMAWHPLGHILA 389 (877)
Q Consensus 317 ~~~~~~~~~~~h~~~v~~i~~~p-~~~~~l~sgs~-----dg~I~iwd~~~~~~~~~~~~~h~-~~V~~v~~sp~g~~l~ 389 (877)
+. ....+..+...+..++|+| ++..++++... ...|.+||+...... .+...+. ..+..++|+||++.|+
T Consensus 177 ~g--~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~ 253 (388)
T 3pe7_A 177 TG--ESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGESCTHEFWVPDGSALV 253 (388)
T ss_dssp TC--CEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEEEEEEEECTTSSCEE
T ss_pred CC--ceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCCCcccccceECCCCCEEE
Confidence 73 3455556777899999999 88744444332 337888887665433 3322222 3588899999998775
Q ss_pred EEEc-CC----eEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEecc--------CCCCeeeecCCCC
Q psy13969 390 TGSN-DH----ASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGM--------GLEDEDSVFPSSE 454 (877)
Q Consensus 390 sg~~-dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~--------g~d~~~~~~~~~~ 454 (877)
..+. ++ .|++||+....... ..................|++|+..++... ..+..+++|+...
T Consensus 254 ~~~~~~~~~~~~l~~~d~~~g~~~~--l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 329 (388)
T 3pe7_A 254 YVSYLKGSPDRFIYSADPETLENRQ--LTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKN 329 (388)
T ss_dssp EEEEETTCCCEEEEEECTTTCCEEE--EEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTT
T ss_pred EEecCCCCCcceEEEEecCCCceEE--EEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccC
Confidence 5443 22 39999987642211 111111000011122346888888887654 3456788887664
No 176
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.65 E-value=5.1e-15 Score=177.05 Aligned_cols=233 Identities=10% Similarity=0.008 Sum_probs=163.9
Q ss_pred EEEEc--CCCCE-EEEEeC-CCeEEEEeCC--C-cceEEEcc-----CCCCeeEEEEcCCCCEEEEEECC----------
Q psy13969 164 HMVWS--HNGLW-MVTSDH-QGYIKYWQSN--M-NNVKTFQG-----HKESIRGISFSPSDSKFATCSDD---------- 221 (877)
Q Consensus 164 ~l~~s--pd~~~-l~sg~~-dg~v~iwd~~--~-~~~~~~~~-----h~~~V~~i~~sp~~~~l~sgs~D---------- 221 (877)
.++|+ ||+++ |+.++. +..|++|++. + .....+.. |...+.+++||||+++|++++.|
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCce
Confidence 55565 89988 776554 6678888876 4 56666666 67788999999999999999877
Q ss_pred CcEEEEeccC------CeeeEEec-cCCCCeEEEEEcCCCCEEEEEecCC------cccEEEEcCC-CC---ceeEEecc
Q psy13969 222 GTVRVWDFYR------CTEEKVLR-GHGADVKCVDWHPYKSLIVSGSKDN------QQPVKLWDPK-AG---QALATLHA 284 (877)
Q Consensus 222 g~I~iwd~~~------~~~~~~l~-~h~~~v~~v~~sp~~~~l~sgs~dg------~~~I~iwd~~-~~---~~~~~~~~ 284 (877)
..|++||+.+ ++ ...+. .+...+.+++|+||+++|+.++.+. ...|++||+. ++ +.......
T Consensus 161 ~~i~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~ 239 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSA-VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG 239 (662)
T ss_dssp EEEEEEETTSTTTTCGGG-SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred eEEEEEECCCCccccCCc-eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC
Confidence 5899999987 44 44555 5667788999999999999888664 1249999998 56 44444445
Q ss_pred CCCCeeEEEEccCCCeEEEEeCCC--eEEEEEcCCCCcceEEEecCCCC---------eEEEEEcCCCCcEEEEEeCCCc
Q psy13969 285 HKSTVMDLAWNQNGNWLVTASRDH--LLKVFDIRNLSSEVQTFRGHKKE---------ASAVAWHPQHEGLFSSGGADGS 353 (877)
Q Consensus 285 h~~~V~~l~~sp~g~~l~s~s~Dg--~I~iwd~~~~~~~~~~~~~h~~~---------v~~i~~~p~~~~~l~sgs~dg~ 353 (877)
|...+.+++|+||+++++++..++ .|.+||+.. .. ...+..+... +.+++|++++. ++++++. +.
T Consensus 240 ~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~-~~-~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~~-~~ 315 (662)
T 3azo_A 240 PEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPAT-GA-ATQLCRREEEFAGPLWTPGMRWFAPLANGL-IAVVHGK-GA 315 (662)
T ss_dssp TTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTT-CC-EEESSCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEBS-SS
T ss_pred CCceEcceEECCCCeEEEEECCCCCeEEEEEECCC-Cc-eeecccccccccCccccccCceEeEeCCCE-EEEEEEc-Cc
Confidence 578899999999999888888888 566666644 22 3333322222 46788988877 7888888 99
Q ss_pred EEEE--EcCCCceeEEecCcCCCCEEEE-EEcCCCCEEEEEEcCCeEEEEeCC
Q psy13969 354 IMFW--HVGADKEVGCIPQAHDNIIWTM-AWHPLGHILATGSNDHASKFWTRN 403 (877)
Q Consensus 354 I~iw--d~~~~~~~~~~~~~h~~~V~~v-~~sp~g~~l~sg~~dg~v~iwd~~ 403 (877)
++|| |+..++ +..+ ..|...+.++ +++.+.-++++++.+....||.++
T Consensus 316 ~~l~~~d~~~~~-~~~l-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 316 AVLGILDPESGE-LVDA-AGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp CEEEEEETTTTE-EEEC-CSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEE
T ss_pred cEEEEEECCCCc-EEEe-cCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEE
Confidence 9999 544444 5555 4666677777 665443445555656555555443
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.65 E-value=2.4e-13 Score=147.53 Aligned_cols=233 Identities=13% Similarity=0.141 Sum_probs=166.6
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEc-cCCCCeeEEEEcCCCCEEEEEECC----CcEEEEeccCC
Q psy13969 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQ-GHKESIRGISFSPSDSKFATCSDD----GTVRVWDFYRC 232 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~-~h~~~V~~i~~sp~~~~l~sgs~D----g~I~iwd~~~~ 232 (877)
+...+.+++|++++++++++..++.|++||.++..+..+. .+...|.+|+|+++++++++...+ +.|.+||..+.
T Consensus 43 ~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD 122 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred cCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCC
Confidence 4556789999999998888888999999998877666544 567889999999999888877766 68999998876
Q ss_pred eeeEEec--cCCCCeEEEEEcCCCCEEEEEecC----CcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEE-e
Q psy13969 233 TEEKVLR--GHGADVKCVDWHPYKSLIVSGSKD----NQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTA-S 305 (877)
Q Consensus 233 ~~~~~l~--~h~~~v~~v~~sp~~~~l~sgs~d----g~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~-s 305 (877)
.....+. .+...+.+++++++++++++...+ ....|+.||..+++... +..+...+..++|++++++|+++ +
T Consensus 123 ~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~ 201 (333)
T 2dg1_A 123 NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTET 201 (333)
T ss_dssp SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEG
T ss_pred EEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeC
Confidence 6543433 245678999999999887766542 12227788876555433 32334568899999999866544 5
Q ss_pred CCCeEEEEEcCCCCcceEE--------EecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCc-----C
Q psy13969 306 RDHLLKVFDIRNLSSEVQT--------FRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQA-----H 372 (877)
Q Consensus 306 ~Dg~I~iwd~~~~~~~~~~--------~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-----h 372 (877)
.++.|.+||+......+.. +..+ ..+..+++++++. ++++...++.|.+||.. ++.+..+... |
T Consensus 202 ~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~ 278 (333)
T 2dg1_A 202 TANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDN-LYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGH 278 (333)
T ss_dssp GGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCC-EEEEEETTTEEEEECTT-SCEEEEEECTTGGGTC
T ss_pred CCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCC-EEEEEcCCCEEEEECCC-CCEEEEEEcCCCcccc
Confidence 6789999999642222221 1112 3678899999987 77777778899999984 5555555211 1
Q ss_pred CCCEEEEEEcCCCCEEEEEEcC
Q psy13969 373 DNIIWTMAWHPLGHILATGSND 394 (877)
Q Consensus 373 ~~~V~~v~~sp~g~~l~sg~~d 394 (877)
...+.+++|++++..|++++.+
T Consensus 279 ~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 279 MLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp SCBCCEEEECTTSCEEEEEEEC
T ss_pred ccCcceEEECCCCCEEEEEeCc
Confidence 1268899999998777666655
No 178
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.64 E-value=6.1e-14 Score=147.13 Aligned_cols=237 Identities=10% Similarity=0.030 Sum_probs=171.4
Q ss_pred CEEEEEEcCCCCEEE-EEeCCCeEEEEeCCCcceEEE-ccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEe
Q psy13969 161 AVRHMVWSHNGLWMV-TSDHQGYIKYWQSNMNNVKTF-QGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVL 238 (877)
Q Consensus 161 ~V~~l~~spd~~~l~-sg~~dg~v~iwd~~~~~~~~~-~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l 238 (877)
...+|++++++++++ +...++.|.+|+........+ ..+...+.+|+++++++++++.. ++.|.+||...... ..+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EEC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eee
Confidence 678889999988777 546788999999766544433 23345688999999988666555 88999999865443 333
Q ss_pred c-cCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCC
Q psy13969 239 R-GHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRN 317 (877)
Q Consensus 239 ~-~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~ 317 (877)
. .....+.+++++++++++++...++. |.+||..+.............+.+|+++++++++++...++.|.+||...
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~--i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNR--VVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTE--EEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCE--EEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 2 23367899999999987777666777 99998766544333333345688999999998777777788999999876
Q ss_pred CCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeE
Q psy13969 318 LSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHAS 397 (877)
Q Consensus 318 ~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v 397 (877)
. ........+...+..|++++++. ++++...++.|.+||........ +...+...+.+++++++++++++...++.|
T Consensus 181 ~-~~~~~~~~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~~~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v 257 (270)
T 1rwi_B 181 N-NQVVLPFTDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGSTTSTV-LPFTGLNTPLAVAVDSDRTVYVADRGNDRV 257 (270)
T ss_dssp C-CEEECCCSSCCSEEEEEECTTCC-EEEEETTTSCEEEECTTCSCCEE-CCCCSCSCEEEEEECTTCCEEEEEGGGTEE
T ss_pred C-ceEeecccCCCCceEEEECCCCC-EEEEECCCCcEEEEcCCCCccee-eccCCCCCceeEEECCCCCEEEEECCCCEE
Confidence 2 22222223336788999999985 77877778899999987654333 323344678999999999988888899999
Q ss_pred EEEeCCC
Q psy13969 398 KFWTRNR 404 (877)
Q Consensus 398 ~iwd~~~ 404 (877)
++|++..
T Consensus 258 ~~~~~~~ 264 (270)
T 1rwi_B 258 VKLTSLE 264 (270)
T ss_dssp EEECCCG
T ss_pred EEEcCCC
Confidence 9999864
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.63 E-value=2.2e-15 Score=167.46 Aligned_cols=231 Identities=10% Similarity=0.006 Sum_probs=157.4
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEcc-CCCCeeE-------------------EEEcCCCCEEEEE-----
Q psy13969 164 HMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQG-HKESIRG-------------------ISFSPSDSKFATC----- 218 (877)
Q Consensus 164 ~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~-h~~~V~~-------------------i~~sp~~~~l~sg----- 218 (877)
.+.|+||+++|++.+.+..|++|++.+.....+.. +...... ++|+|+++.+++.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~ 164 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT 164 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence 37899999999999999999999988766554443 4332222 3567777766554
Q ss_pred ECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcC-CCCEEEEEecCCc----ccEEEEcCCCCceeEEeccC--CCCeeE
Q psy13969 219 SDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHP-YKSLIVSGSKDNQ----QPVKLWDPKAGQALATLHAH--KSTVMD 291 (877)
Q Consensus 219 s~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp-~~~~l~sgs~dg~----~~I~iwd~~~~~~~~~~~~h--~~~V~~ 291 (877)
..+..|++||+.+++..... .+...+..++|+| ++..|+..+.+.. ..|++||+...+. ..+..+ ...+..
T Consensus 165 ~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~ 242 (396)
T 3c5m_A 165 NPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTH 242 (396)
T ss_dssp CCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEE
T ss_pred CCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCCccccc
Confidence 35678999999887655444 4677899999999 7887776665422 2389999876553 333333 235888
Q ss_pred EEEccCCCeEEEEeCC-----CeEEEEEcCCCCcceEEEecCCCCeEEEEEcC-CCCcEEEEEe----------------
Q psy13969 292 LAWNQNGNWLVTASRD-----HLLKVFDIRNLSSEVQTFRGHKKEASAVAWHP-QHEGLFSSGG---------------- 349 (877)
Q Consensus 292 l~~sp~g~~l~s~s~D-----g~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p-~~~~~l~sgs---------------- 349 (877)
++|+|++++|++.+.+ ..|++||+.+. ... .+.... .+. ++|++ ++. +|++++
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g-~~~-~l~~~~-~~~-~~~s~~dg~-~l~~~~~~~p~~~~~~~~~~~~ 317 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYFKGQTDRVIYKANPETL-ENE-EVMVMP-PCS-HLMSNFDGS-LMVGDGCDAPVDVADADSYNIE 317 (396)
T ss_dssp EEECTTSSCEEEEEEETTTCCEEEEEECTTTC-CEE-EEEECC-SEE-EEEECSSSS-EEEEEECCC----------CCC
T ss_pred eEECCCCCEEEEEecCCCCccceEEEEECCCC-CeE-EeeeCC-CCC-CCccCCCCc-eEEEecCCcceeeccccccccC
Confidence 9999999988887654 45999999763 222 222122 233 89999 988 555543
Q ss_pred CCCcEEEEEcCCCceeEEecCcCCC-----------CEEEEEEcCCCCEEEEEEc-CCeEEEEeCC
Q psy13969 350 ADGSIMFWHVGADKEVGCIPQAHDN-----------IIWTMAWHPLGHILATGSN-DHASKFWTRN 403 (877)
Q Consensus 350 ~dg~I~iwd~~~~~~~~~~~~~h~~-----------~V~~v~~sp~g~~l~sg~~-dg~v~iwd~~ 403 (877)
.+..|++||+.+++... + ..+.. .+.+++|+++++.|+..+. ++...||.++
T Consensus 318 ~~~~i~~~d~~~~~~~~-l-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 318 NDPFLYVLNTKAKSAQK-L-CKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp CCCEEEEEETTTTBCCE-E-EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCcEEEEecccCceEE-c-cCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 24689999998776433 3 22332 2567899999988877664 5666666554
No 180
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.62 E-value=1.5e-12 Score=138.25 Aligned_cols=274 Identities=8% Similarity=-0.017 Sum_probs=190.9
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEc--cCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeee-
Q psy13969 159 DCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQ--GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEE- 235 (877)
Q Consensus 159 ~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~--~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~- 235 (877)
...+.+|++.++++++++...++.|.+|+.+ ..+..+. .+...+.+|++++++.++++...++.|.+||.. ++..
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~ 91 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKE 91 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEE
Confidence 4678999999999988877778999999988 5555443 345779999999999888877778899999986 3322
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEE-eccCCCCeeEEEEccCCCeEEEEeCCCeEEEEE
Q psy13969 236 KVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALAT-LHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD 314 (877)
Q Consensus 236 ~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~-~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd 314 (877)
..+......+.++++++++.++++...++. |.+||. +++.... +..+...+.+|+++++++++++...++.|.+||
T Consensus 92 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~--i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 168 (299)
T 2z2n_A 92 YTLPNPDSAPYGITEGPNGDIWFTEMNGNR--IGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRIT 168 (299)
T ss_dssp EECSSTTCCEEEEEECTTSCEEEEETTTTE--EEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred EeCCCcCCCceeeEECCCCCEEEEecCCce--EEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEc
Confidence 222234567899999999988777766776 999998 5543322 233456789999999998877777788999999
Q ss_pred cCCCCcceEE-EecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEc
Q psy13969 315 IRNLSSEVQT-FRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSN 393 (877)
Q Consensus 315 ~~~~~~~~~~-~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~ 393 (877)
. + ...... +..+...+..+++++++. ++++...++.|.+||. ++.........+...+.+++++++++++++...
T Consensus 169 ~-~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 244 (299)
T 2z2n_A 169 E-S-GDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWG 244 (299)
T ss_dssp T-T-CCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred C-C-CcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccC
Confidence 8 4 232222 233455788999999877 7776666789999999 555433222335567999999999987776667
Q ss_pred CCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecC
Q psy13969 394 DHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFP 451 (877)
Q Consensus 394 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~ 451 (877)
++.|.+||.+ + .+.. +. +......+.++.+ .++..+++.. .+.+..++
T Consensus 245 ~~~i~~~d~~--g-~~~~-~~---~~~~~~~~~~i~~-~~g~l~v~~~--~~~l~~~~ 292 (299)
T 2z2n_A 245 ANKIGRLTSN--N-IIEE-YP---IQIKSAEPHGICF-DGETIWFAME--CDKIGKLT 292 (299)
T ss_dssp TTEEEEEETT--T-EEEE-EE---CSSSSCCEEEEEE-CSSCEEEEET--TTEEEEEE
T ss_pred CceEEEECCC--C-ceEE-Ee---CCCCCCccceEEe-cCCCEEEEec--CCcEEEEE
Confidence 8899999973 1 1111 11 1111234667777 6666666643 34444443
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.59 E-value=4.3e-13 Score=142.10 Aligned_cols=240 Identities=12% Similarity=0.160 Sum_probs=172.9
Q ss_pred cCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEec------cCCCCeEEEEE-cCCCCEEEEEec-CCcccEE
Q psy13969 198 GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLR------GHGADVKCVDW-HPYKSLIVSGSK-DNQQPVK 269 (877)
Q Consensus 198 ~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~------~h~~~v~~v~~-sp~~~~l~sgs~-dg~~~I~ 269 (877)
+|-..+.+|+++++++++++.+.++.|.+||.. ++.+..+. .+...+.++++ .++++++++... ++. |+
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~--i~ 103 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQ--IQ 103 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCE--EE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCE--EE
Confidence 455678999999999988888889999999986 55555553 23457899999 466666655533 666 99
Q ss_pred EEcCCCCceeEEecc-CCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEe--cCCCCeEEEEEcCCCCcEEE
Q psy13969 270 LWDPKAGQALATLHA-HKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFR--GHKKEASAVAWHPQHEGLFS 346 (877)
Q Consensus 270 iwd~~~~~~~~~~~~-h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~--~h~~~v~~i~~~p~~~~~l~ 346 (877)
+|| .+++.+..+.. +...+.+|+++++++++++...++.|++||... ..+..+. .+...+..|++++++. +++
T Consensus 104 ~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g--~~~~~~~~~~~~~~p~~i~~~~~g~-l~v 179 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG--NVLHKFGCSKHLEFPNGVVVNDKQE-IFI 179 (286)
T ss_dssp EEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS--CEEEEEECTTTCSSEEEEEECSSSE-EEE
T ss_pred EEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC--CEEEEeCCCCccCCcEEEEECCCCC-EEE
Confidence 999 56666666643 446789999999999888878889999999653 4444443 3455789999999987 777
Q ss_pred EEeCCCcEEEEEcCCCceeEEecC-cCCCCEEEEEEcCCCCEEEEEEcCC-eEEEEeCCCCCCCcccccccCCcceeeee
Q psy13969 347 SGGADGSIMFWHVGADKEVGCIPQ-AHDNIIWTMAWHPLGHILATGSNDH-ASKFWTRNRLGDPMRDRYNQKGLAHCITG 424 (877)
Q Consensus 347 sgs~dg~I~iwd~~~~~~~~~~~~-~h~~~V~~v~~sp~g~~l~sg~~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 424 (877)
+.+.++.|++||.. ++.+..+.. .+...+..|+++++++++++...++ .|.+|+.+. ..+..... ......
T Consensus 180 ~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g--~~~~~~~~----~~~~~~ 252 (286)
T 1q7f_A 180 SDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG--QLISALES----KVKHAQ 252 (286)
T ss_dssp EEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS--CEEEEEEE----SSCCSC
T ss_pred EECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC--CEEEEEcc----cCCCCc
Confidence 77788999999984 444545521 2236789999999999888888776 999999542 22211110 011123
Q ss_pred eeeeeccCCCCeEEeccCCCCeeeecCCC
Q psy13969 425 VYNEEMELNDSAVIPGMGLEDEDSVFPSS 453 (877)
Q Consensus 425 v~~~~~~~d~~~l~~~~g~d~~~~~~~~~ 453 (877)
..++++++++..+++. .++.+++|...
T Consensus 253 ~~~i~~~~~g~l~vs~--~~~~v~v~~~~ 279 (286)
T 1q7f_A 253 CFDVALMDDGSVVLAS--KDYRLYIYRYV 279 (286)
T ss_dssp EEEEEEETTTEEEEEE--TTTEEEEEECS
T ss_pred ceeEEECCCCcEEEEC--CCCeEEEEEcc
Confidence 5678899988766663 47899999654
No 182
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.59 E-value=5.9e-14 Score=168.70 Aligned_cols=243 Identities=8% Similarity=-0.093 Sum_probs=167.1
Q ss_pred ccCCEEEEEEcCCCCEEEEE-----eCCCeEEEEeCCCcceEEEccCCCCe--eEEEEcCCCCEEEEEECCCc-------
Q psy13969 158 HDCAVRHMVWSHNGLWMVTS-----DHQGYIKYWQSNMNNVKTFQGHKESI--RGISFSPSDSKFATCSDDGT------- 223 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l~sg-----~~dg~v~iwd~~~~~~~~~~~h~~~V--~~i~~sp~~~~l~sgs~Dg~------- 223 (877)
|...+.+++||||+++||.+ +.+.+|++||+++..... ..+...+ .+++|+||++.|+.++.|..
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-CcccCcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence 44568999999999999843 334689999998876541 1122222 68999999999999998876
Q ss_pred ------EEEEeccCCee--eEEe--ccCCCCeEEEEEcCCCCEEEEEecCC--cccEEEEcCCCCceeEEeccCCCCeeE
Q psy13969 224 ------VRVWDFYRCTE--EKVL--RGHGADVKCVDWHPYKSLIVSGSKDN--QQPVKLWDPKAGQALATLHAHKSTVMD 291 (877)
Q Consensus 224 ------I~iwd~~~~~~--~~~l--~~h~~~v~~v~~sp~~~~l~sgs~dg--~~~I~iwd~~~~~~~~~~~~h~~~V~~ 291 (877)
|++|++.+... ...+ ..|...+.++.|++|+++|++.+.+. ...|++||..+++ ...+..+...+..
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~ 276 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYE 276 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEE
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEE
Confidence 99999987652 2233 33556789999999999888877665 2238888776554 4455556666677
Q ss_pred EEEccCCCeEEEEe---CCCeEEEEEcCCCCc-ceEEEecC--CCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcC-CCce
Q psy13969 292 LAWNQNGNWLVTAS---RDHLLKVFDIRNLSS-EVQTFRGH--KKEASAVAWHPQHEGLFSSGGADGSIMFWHVG-ADKE 364 (877)
Q Consensus 292 l~~sp~g~~l~s~s---~Dg~I~iwd~~~~~~-~~~~~~~h--~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~-~~~~ 364 (877)
..| +++.+++++. .+..|.+||+.+... ....+..| ...|..++|+ +..++++...|+..+||.+. .+..
T Consensus 277 ~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~ 353 (695)
T 2bkl_A 277 VHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKP 353 (695)
T ss_dssp EEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCE
T ss_pred EEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCe
Confidence 767 5556444443 257899999876321 12344433 4457888888 34588999999988888665 3445
Q ss_pred eEEecCcCCCCEEEEEEcCCCCEEEEEE----cCCeEEEEeCCCC
Q psy13969 365 VGCIPQAHDNIIWTMAWHPLGHILATGS----NDHASKFWTRNRL 405 (877)
Q Consensus 365 ~~~~~~~h~~~V~~v~~sp~g~~l~sg~----~dg~v~iwd~~~~ 405 (877)
+..+.......|..+++++++..|+... ..++|++||+.+.
T Consensus 354 ~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 354 VRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTG 398 (695)
T ss_dssp EEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTC
T ss_pred eEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 5555323366788899999987665333 3467999998753
No 183
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.58 E-value=1.8e-12 Score=150.16 Aligned_cols=281 Identities=14% Similarity=0.106 Sum_probs=191.7
Q ss_pred CCCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEecc--CCeeeEEeccCCCCeEE
Q psy13969 170 NGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFY--RCTEEKVLRGHGADVKC 247 (877)
Q Consensus 170 d~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~--~~~~~~~l~~h~~~v~~ 247 (877)
.+.++++...+++|.++|..+..+.........+..++|+||+++|++++.|+.|.+||+. +.+.+..+.. ......
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~~ 244 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEARS 244 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCCce
Confidence 3456778888999999998876655333344467799999999999999999999999996 7777777764 345679
Q ss_pred EEEc----CCCCEEEEEecC-CcccEEEEcCCCCceeEEeccC----------CC-CeeEEEEccCCCe-EEEEeCCCeE
Q psy13969 248 VDWH----PYKSLIVSGSKD-NQQPVKLWDPKAGQALATLHAH----------KS-TVMDLAWNQNGNW-LVTASRDHLL 310 (877)
Q Consensus 248 v~~s----p~~~~l~sgs~d-g~~~I~iwd~~~~~~~~~~~~h----------~~-~V~~l~~sp~g~~-l~s~s~Dg~I 310 (877)
++|+ |+++++++++.. +. |.++|..+.+.+.++... .. .+..|.+++++.. +++...++.|
T Consensus 245 ia~s~~~~pDGk~l~v~n~~~~~--v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v 322 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAYWPPQ--YVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKI 322 (567)
T ss_dssp EEECCSTTCTTTEEEEEEEETTE--EEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred eEEccccCCCCCEEEEEEccCCe--EEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeE
Confidence 9999 699988877766 55 999999999888776432 12 6788888887554 4445567999
Q ss_pred EEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecC----cCCCCEEEEEEcCCCC
Q psy13969 311 KVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ----AHDNIIWTMAWHPLGH 386 (877)
Q Consensus 311 ~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~----~h~~~V~~v~~sp~g~ 386 (877)
.++|....................+.|+++++++|++...++.|.+||+.+++.+..+.. .|...-..+ ++|++.
T Consensus 323 ~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g 401 (567)
T 1qks_A 323 LLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFG 401 (567)
T ss_dssp EEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTE
T ss_pred EEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCC
Confidence 999987643333222334456778999999997777777789999999999987776643 243222222 688754
Q ss_pred -EEEEEE-cCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCC------CCeeeecCCCC
Q psy13969 387 -ILATGS-NDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGL------EDEDSVFPSSE 454 (877)
Q Consensus 387 -~l~sg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~------d~~~~~~~~~~ 454 (877)
++++.. .+++|.++|....+...........+......-..+.+++++.++++.... ...+.+|+..+
T Consensus 402 ~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~ 477 (567)
T 1qks_A 402 PVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKA 477 (567)
T ss_dssp EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGG
T ss_pred cEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCc
Confidence 444443 468999999875321100000011111111112335578888888876522 24777776654
No 184
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.57 E-value=4.2e-13 Score=145.56 Aligned_cols=244 Identities=13% Similarity=0.100 Sum_probs=176.1
Q ss_pred CCCeeEEEEcCCCCEEEEEECC------------------------CcEEEEeccCCeeeEEec-cCCCCeEEEEEcCCC
Q psy13969 200 KESIRGISFSPSDSKFATCSDD------------------------GTVRVWDFYRCTEEKVLR-GHGADVKCVDWHPYK 254 (877)
Q Consensus 200 ~~~V~~i~~sp~~~~l~sgs~D------------------------g~I~iwd~~~~~~~~~l~-~h~~~v~~v~~sp~~ 254 (877)
-..|.+|+++++++++++.+.+ ++|.+||..+++.+..+. .+......|++++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3568999999999998888777 479999998888776654 345678999999999
Q ss_pred CEEEEEecCCcccEEEEcCCCCc-eeEEe---------ccCCCCeeEEEEcc-CCCeEEEEe-CCCeEEEEEcCCCCcce
Q psy13969 255 SLIVSGSKDNQQPVKLWDPKAGQ-ALATL---------HAHKSTVMDLAWNQ-NGNWLVTAS-RDHLLKVFDIRNLSSEV 322 (877)
Q Consensus 255 ~~l~sgs~dg~~~I~iwd~~~~~-~~~~~---------~~h~~~V~~l~~sp-~g~~l~s~s-~Dg~I~iwd~~~~~~~~ 322 (877)
+++++.+.++. |++||..... .+..+ ..+......|+|++ +++++++.+ .++.|++||.. ...+
T Consensus 103 ~l~v~d~~~~~--v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~--g~~~ 178 (329)
T 3fvz_A 103 NYWVTDVALHQ--VFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS--GKFV 178 (329)
T ss_dssp CEEEEETTTTE--EEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT--SCEE
T ss_pred CEEEEECCCCE--EEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC--CCEE
Confidence 98888877777 9999986542 45555 24455789999999 788777776 68999999954 3445
Q ss_pred EEEec----------CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEec-CcCCCCEEEEEEcCCCCEEEEE
Q psy13969 323 QTFRG----------HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIP-QAHDNIIWTMAWHPLGHILATG 391 (877)
Q Consensus 323 ~~~~~----------h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~-~~h~~~V~~v~~sp~g~~l~sg 391 (877)
..+.. +-.....|++++++..++++...++.|++||..+++.+..+. ..+...+.+++|+| +.++++.
T Consensus 179 ~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~ 257 (329)
T 3fvz_A 179 TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVN 257 (329)
T ss_dssp EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEE
T ss_pred EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeC
Confidence 55432 223488999999955588888889999999998888777763 23556789999999 3333332
Q ss_pred -------EcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCC
Q psy13969 392 -------SNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSS 453 (877)
Q Consensus 392 -------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~ 453 (877)
..+..|++|++... ..+.... ....+......+++++++..+++. ..++.|++|...
T Consensus 258 g~~~v~~~~~~~v~~~~~~~g-~~~~~~~---~~~~~~~~p~~ia~~~dG~lyvad-~~~~~I~~~~~~ 321 (329)
T 3fvz_A 258 GKPYFGDQEPVQGFVMNFSSG-EIIDVFK---PVRKHFDMPHDIVASEDGTVYIGD-AHTNTVWKFTLT 321 (329)
T ss_dssp CCCCTTCSCCCCEEEEETTTC-CEEEEEC---CSSSCCSSEEEEEECTTSEEEEEE-SSSCCEEEEEEE
T ss_pred CCEEeccCCCcEEEEEEcCCC-eEEEEEc---CCCCccCCeeEEEECCCCCEEEEE-CCCCEEEEEeCC
Confidence 33458999998653 2221110 012334457788999998555555 456788888654
No 185
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.56 E-value=2.7e-13 Score=149.11 Aligned_cols=232 Identities=11% Similarity=0.051 Sum_probs=164.9
Q ss_pred EEEEcCCCCEEEEEe----------CCCeEEEEeCCCcc-eEEEcc------CCCCeeEEEEcCCCCEEEEEEC--CCcE
Q psy13969 164 HMVWSHNGLWMVTSD----------HQGYIKYWQSNMNN-VKTFQG------HKESIRGISFSPSDSKFATCSD--DGTV 224 (877)
Q Consensus 164 ~l~~spd~~~l~sg~----------~dg~v~iwd~~~~~-~~~~~~------h~~~V~~i~~sp~~~~l~sgs~--Dg~I 224 (877)
.++|+||+++|++++ .++.|.+||..+.. +..+.. +......|+|+||+++|+++.. +++|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 899999999998876 36789999987643 344432 2345678999999999998874 5899
Q ss_pred EEEeccCCeeeEE-eccCCCCeEEEEEcCCC-CEEEEEecCCcccEEEEcCCC-CceeEEe------ccCCCCeeEEEEc
Q psy13969 225 RVWDFYRCTEEKV-LRGHGADVKCVDWHPYK-SLIVSGSKDNQQPVKLWDPKA-GQALATL------HAHKSTVMDLAWN 295 (877)
Q Consensus 225 ~iwd~~~~~~~~~-l~~h~~~v~~v~~sp~~-~~l~sgs~dg~~~I~iwd~~~-~~~~~~~------~~h~~~V~~l~~s 295 (877)
.+||+.+.+.+.. +.. .. ...+.+.|++ ..+++.+.|+. +.+|++.. ++..... ..+...+ .+.++
T Consensus 134 ~v~d~~~~~~~~~~i~~-~~-~~~v~~~p~~~~~~~~~~~dg~--~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~ 208 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAA-AG-CWSVIPQPNRPRSFMTICGDGG--LLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPA 208 (361)
T ss_dssp EEEETTTTEEEEEEGGG-TT-EEEEEECTTSSSEEEEEETTSS--EEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCE
T ss_pred EEEECCCCcEEEEEecC-CC-cceeEEcCCCCeeEEEECCCCc--EEEEEECCCCcEeeeccccceEcCCCCce-EEEec
Confidence 9999999988777 542 22 2335677765 67888899998 99998865 4443221 1222222 23345
Q ss_pred cCCCeEEEEeCCCeEEEEEcCCCCcce-EEEec------CC----CCeEEEEEcCCCCcEEEEEeC----------CCcE
Q psy13969 296 QNGNWLVTASRDHLLKVFDIRNLSSEV-QTFRG------HK----KEASAVAWHPQHEGLFSSGGA----------DGSI 354 (877)
Q Consensus 296 p~g~~l~s~s~Dg~I~iwd~~~~~~~~-~~~~~------h~----~~v~~i~~~p~~~~~l~sgs~----------dg~I 354 (877)
+++..++..+.++.|.++|+......+ ..+.. +. .....++|++++..++++.+. ...|
T Consensus 209 ~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v 288 (361)
T 2oiz_A 209 LDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEI 288 (361)
T ss_dssp ECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEE
T ss_pred ccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceE
Confidence 677778888889999999987522111 11111 00 111237899998877766551 3479
Q ss_pred EEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 355 MFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 355 ~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
.+||+.+.+.+..+. .+. +.+|+|+||+++|++++. +.|.+||..+
T Consensus 289 ~viD~~t~~~v~~i~-~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t 334 (361)
T 2oiz_A 289 WVMDTKTKQRVARIP-GRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQ 334 (361)
T ss_dssp EEEETTTTEEEEEEE-CTT--CCEEEEETTTTEEEEECS-SCEEEEECSS
T ss_pred EEEECCCCcEEEEEe-cCC--eeEEEECCCCCEEEEeCC-CeEEEEECCC
Confidence 999999999998884 444 899999999999998887 9999999875
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.56 E-value=8.7e-13 Score=158.93 Aligned_cols=247 Identities=9% Similarity=0.048 Sum_probs=167.7
Q ss_pred CCCCeeEEEEcCCCCEEEEEECCC-----cEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCc--------
Q psy13969 199 HKESIRGISFSPSDSKFATCSDDG-----TVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQ-------- 265 (877)
Q Consensus 199 h~~~V~~i~~sp~~~~l~sgs~Dg-----~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~-------- 265 (877)
|...+.+++||||+++||.++.++ +|++||+.+++.+.....+ ..+.+++|+||++.|+.++.+..
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccc
Confidence 445688999999999998877644 8999999998876543322 23678999999999998887642
Q ss_pred ------ccEEEEcCCCCce--eEEec--cCCCCeeEEEEccCCCeEEEEeC-----CCeEEEEEcCC------CCcceEE
Q psy13969 266 ------QPVKLWDPKAGQA--LATLH--AHKSTVMDLAWNQNGNWLVTASR-----DHLLKVFDIRN------LSSEVQT 324 (877)
Q Consensus 266 ------~~I~iwd~~~~~~--~~~~~--~h~~~V~~l~~sp~g~~l~s~s~-----Dg~I~iwd~~~------~~~~~~~ 324 (877)
..|++|++.+.+. ...+. .|...+..++||+|+++|+..+. +..|++||+.. ....+..
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 1299999987763 22222 34566889999999999988875 66899999975 3324566
Q ss_pred EecCCCCeEEEEEcCCCCcEEEEEeCCC---cEEEEEcCCCc--eeEEecCcCC-CCEEEEEEcCCCCEEEEEEcCCeEE
Q psy13969 325 FRGHKKEASAVAWHPQHEGLFSSGGADG---SIMFWHVGADK--EVGCIPQAHD-NIIWTMAWHPLGHILATGSNDHASK 398 (877)
Q Consensus 325 ~~~h~~~v~~i~~~p~~~~~l~sgs~dg---~I~iwd~~~~~--~~~~~~~~h~-~~V~~v~~sp~g~~l~sg~~dg~v~ 398 (877)
+..+...+.. .|++++..+++++..+. .|.+||+.+.. ....+...+. ..|.+++|++++.++++...|+..+
T Consensus 282 l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~ 360 (710)
T 2xdw_A 282 LIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 360 (710)
T ss_dssp EECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEE
T ss_pred eeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEE
Confidence 6667666655 48888886666655443 69999998764 2233322223 3688899998788899999998655
Q ss_pred E--EeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEecc---CCCCeeeecCCCC
Q psy13969 399 F--WTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGM---GLEDEDSVFPSSE 454 (877)
Q Consensus 399 i--wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~---g~d~~~~~~~~~~ 454 (877)
| |++.. +..+.. +......+..+.+++++..++... .....+++|+..+
T Consensus 361 l~~~~~~~-g~~~~~------l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 361 LQLHDLAT-GALLKI------FPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK 414 (710)
T ss_dssp EEEEETTT-CCEEEE------ECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTS
T ss_pred EEEEECCC-CCEEEe------cCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 4 55432 221111 111233466677888777665432 2345677776543
No 187
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.55 E-value=1.7e-12 Score=139.30 Aligned_cols=237 Identities=12% Similarity=0.090 Sum_probs=167.0
Q ss_pred CEEEEEEcCCCCEEEE-------EeCCCeEEEEeCCCcceEEEcc-----CCCCeeEEEEcCC-CCEEEEEECCCcEEEE
Q psy13969 161 AVRHMVWSHNGLWMVT-------SDHQGYIKYWQSNMNNVKTFQG-----HKESIRGISFSPS-DSKFATCSDDGTVRVW 227 (877)
Q Consensus 161 ~V~~l~~spd~~~l~s-------g~~dg~v~iwd~~~~~~~~~~~-----h~~~V~~i~~sp~-~~~l~sgs~Dg~I~iw 227 (877)
...+++|++++.++++ ...++.|.+|+.....+..+.. +...+.+++++++ +++++ ++....|.+|
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~~~~l~~~ 97 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV-ADMRLGLLVV 97 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE-EETTTEEEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE-EECCCCEEEE
Confidence 4577888888887777 5678899999977666655543 5567999999998 65444 4444589999
Q ss_pred eccCCeeeEE-ecc----CCCCeEEEEEcCCCCEEEEEecC---------------CcccEEEEcCCCCceeEEeccCCC
Q psy13969 228 DFYRCTEEKV-LRG----HGADVKCVDWHPYKSLIVSGSKD---------------NQQPVKLWDPKAGQALATLHAHKS 287 (877)
Q Consensus 228 d~~~~~~~~~-l~~----h~~~v~~v~~sp~~~~l~sgs~d---------------g~~~I~iwd~~~~~~~~~~~~h~~ 287 (877)
|.. ++.... ... ....+.+++++++++++++...+ +. |..||.. ++... +..+..
T Consensus 98 d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~-g~~~~-~~~~~~ 172 (314)
T 1pjx_A 98 QTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGS--IYCFTTD-GQMIQ-VDTAFQ 172 (314)
T ss_dssp ETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEE--EEEECTT-SCEEE-EEEEES
T ss_pred eCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCe--EEEECCC-CCEEE-eccCCC
Confidence 987 554333 221 12458899999999888777654 34 8888876 54333 333345
Q ss_pred CeeEEEEc----cCCCeEEEE-eCCCeEEEEEcCCCCc-----ceEEEecCC-CCeEEEEEcCCCCcEEEEEeCCCcEEE
Q psy13969 288 TVMDLAWN----QNGNWLVTA-SRDHLLKVFDIRNLSS-----EVQTFRGHK-KEASAVAWHPQHEGLFSSGGADGSIMF 356 (877)
Q Consensus 288 ~V~~l~~s----p~g~~l~s~-s~Dg~I~iwd~~~~~~-----~~~~~~~h~-~~v~~i~~~p~~~~~l~sgs~dg~I~i 356 (877)
....++|+ ++++.|+++ ..++.|.+||+..... .+..+..+. ..+..+++++++. ++++...++.|.+
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~ 251 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEV 251 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEE
Confidence 57889999 998765555 5678999999762122 122233333 5678899999986 7777777889999
Q ss_pred EEcCCCceeEEecCcCCCCEEEEEEcCCCCEEE-EEEcCCeEEEEeCCCC
Q psy13969 357 WHVGADKEVGCIPQAHDNIIWTMAWHPLGHILA-TGSNDHASKFWTRNRL 405 (877)
Q Consensus 357 wd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~-sg~~dg~v~iwd~~~~ 405 (877)
||..+++.+..+ ..+...+.+++|+++++.|+ +...++.|..|++...
T Consensus 252 ~d~~~g~~~~~~-~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 252 FGPDGGQPKMRI-RCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp ECTTCBSCSEEE-ECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EcCCCCcEeEEE-eCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 999866665555 34557799999999998554 4455689999998653
No 188
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.55 E-value=2.9e-11 Score=128.24 Aligned_cols=236 Identities=10% Similarity=0.004 Sum_probs=169.8
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEc--cCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeE
Q psy13969 159 DCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQ--GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEK 236 (877)
Q Consensus 159 ~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~--~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~ 236 (877)
...+.+|++++++.++++...++.|..|+.+. .+..+. .+...+.+|+++++++++++...++.|.+||. +++...
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~ 133 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKG-IIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE 133 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCC-cEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE
Confidence 46799999999999888877789999999763 333333 24567899999999988887777889999998 544433
Q ss_pred E-eccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEE-eccCCCCeeEEEEccCCCeEEEEeCCCeEEEEE
Q psy13969 237 V-LRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALAT-LHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD 314 (877)
Q Consensus 237 ~-l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~-~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd 314 (877)
. +..+...+.+++++++++++++...++. |.+||. +++.... +..+...+.+|+++++++++++...++.|.+||
T Consensus 134 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~--i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 210 (299)
T 2z2n_A 134 YELPNKGSYPSFITLGSDNALWFTENQNNA--IGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRIT 210 (299)
T ss_dssp EECSSTTCCEEEEEECTTSCEEEEETTTTE--EEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred ecCCCCCCCCceEEEcCCCCEEEEeCCCCE--EEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEEC
Confidence 2 2334567899999999987777666666 999998 6654432 333456788999999998777776788999999
Q ss_pred cCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcC
Q psy13969 315 IRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSND 394 (877)
Q Consensus 315 ~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~d 394 (877)
. +.......+..+...+.+|++++++. ++++...++.|.+||. ++.........+...+.++++ +++.++++.. .
T Consensus 211 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~ 285 (299)
T 2z2n_A 211 T-SGEITEFKIPTPNARPHAITAGAGID-LWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAME-C 285 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEET-T
T ss_pred C-CCcEEEEECCCCCCCceeEEECCCCC-EEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEec-C
Confidence 8 42221112233456789999999987 7766667789999998 343322212344567999999 8888777655 5
Q ss_pred CeEEEEeCCC
Q psy13969 395 HASKFWTRNR 404 (877)
Q Consensus 395 g~v~iwd~~~ 404 (877)
+.|..++...
T Consensus 286 ~~l~~~~~~~ 295 (299)
T 2z2n_A 286 DKIGKLTLIK 295 (299)
T ss_dssp TEEEEEEEC-
T ss_pred CcEEEEEcCc
Confidence 6777777643
No 189
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.55 E-value=2.4e-13 Score=164.52 Aligned_cols=241 Identities=12% Similarity=0.026 Sum_probs=166.7
Q ss_pred CCEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCc-----------
Q psy13969 160 CAVRHMVWSHNGLWMVTSDHQ-----GYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGT----------- 223 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~~d-----g~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~----------- 223 (877)
..+..++||||+++||.++.+ .+|++||+++........+...+..++|+|| +.|+.++.|..
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCC
Confidence 368899999999999876544 4699999988776544323323468899999 99998887654
Q ss_pred ---EEEEeccCCee--eEEecc--CCCCeEEEEEcCCCCEEEEEecCC---cccEEEEcCCCC--ceeEEeccCCCCeeE
Q psy13969 224 ---VRVWDFYRCTE--EKVLRG--HGADVKCVDWHPYKSLIVSGSKDN---QQPVKLWDPKAG--QALATLHAHKSTVMD 291 (877)
Q Consensus 224 ---I~iwd~~~~~~--~~~l~~--h~~~v~~v~~sp~~~~l~sgs~dg---~~~I~iwd~~~~--~~~~~~~~h~~~V~~ 291 (877)
|++|++.+... ...+.. +...+.++.|++|+++|+..+.+. ...|++||+.++ ++...+..+...+..
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~ 321 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWD 321 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEE
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEE
Confidence 89999876542 233332 334588999999999888877653 223999999876 324555555555555
Q ss_pred EEEccCCCeEEEEeCC----CeEEEEEcCCCC-cceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcC-CCcee
Q psy13969 292 LAWNQNGNWLVTASRD----HLLKVFDIRNLS-SEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVG-ADKEV 365 (877)
Q Consensus 292 l~~sp~g~~l~s~s~D----g~I~iwd~~~~~-~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~-~~~~~ 365 (877)
.. +++++.|+..+.+ ..|.+||+.... .....+..+...+..++|+ +..++++...|+..+||.+. .+..+
T Consensus 322 ~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~ 398 (741)
T 1yr2_A 322 FV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPA 398 (741)
T ss_dssp EE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEE
T ss_pred EE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCce
Confidence 54 4888888888764 449999987631 2233344444556677877 44588888899987777654 34455
Q ss_pred EEecCcCCCCEEEEEEcCCCCEEE-EEE---cCCeEEEEeCCC
Q psy13969 366 GCIPQAHDNIIWTMAWHPLGHILA-TGS---NDHASKFWTRNR 404 (877)
Q Consensus 366 ~~~~~~h~~~V~~v~~sp~g~~l~-sg~---~dg~v~iwd~~~ 404 (877)
..+...+...|..+++++++..|+ +.+ ..++|++||+.+
T Consensus 399 ~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 399 GAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp EECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred eeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 555333466788999999986544 333 346899999865
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.53 E-value=3.5e-12 Score=134.36 Aligned_cols=214 Identities=9% Similarity=0.046 Sum_probs=167.6
Q ss_pred CCCCEEEEEeCCCeEEEEeC-CCcceEEEccCC-CCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccC-CCCe
Q psy13969 169 HNGLWMVTSDHQGYIKYWQS-NMNNVKTFQGHK-ESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGH-GADV 245 (877)
Q Consensus 169 pd~~~l~sg~~dg~v~iwd~-~~~~~~~~~~h~-~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h-~~~v 245 (877)
..+++|++++.++.|++||. +.+.+..+..+. ..++++++++++++|+ +.+..|..||. +++.+..+..+ ...+
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 34678999999999999998 555566676665 5789999999999888 45788999998 88888888865 3578
Q ss_pred EEEEEcCCCCEEEEEec-CCcccEEEEcCCCCceeEEecc------CCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCC
Q psy13969 246 KCVDWHPYKSLIVSGSK-DNQQPVKLWDPKAGQALATLHA------HKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNL 318 (877)
Q Consensus 246 ~~v~~sp~~~~l~sgs~-dg~~~I~iwd~~~~~~~~~~~~------h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~ 318 (877)
.++.+.+++++|++.+. ++. |..+|. +++.+..+.. +......+++.+++++|++.+.++.|.+||..
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~--v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-- 154 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPST--ILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-- 154 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEE--EEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT--
T ss_pred cccEECCCCCEEEEecCCCCE--EEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC--
Confidence 89999999999999887 555 888886 6777766542 22345667889999999999999999999986
Q ss_pred CcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCc-----CCCCEEEEEEcCCCCEEEEEE
Q psy13969 319 SSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQA-----HDNIIWTMAWHPLGHILATGS 392 (877)
Q Consensus 319 ~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-----h~~~V~~v~~sp~g~~l~sg~ 392 (877)
.+.+..+..+ ..+.++.+.+++. ++++++.++.|..||..+++.+-.+... .-..+..++..+++.++++..
T Consensus 155 G~~~w~~~~~-~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 155 GQLLNSVKLS-GTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp SCEEEEEECS-SCCCEEEECTTSC-EEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CCEEEEEECC-CCccceeEcCCCC-EEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 4666666654 4566778888877 7777777888999999989988777321 123378899999999888774
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.53 E-value=1.1e-11 Score=143.48 Aligned_cols=289 Identities=14% Similarity=0.125 Sum_probs=197.3
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCCeEEEEeCC--C-cceEEEccCCCCeeEEEEc----CCCCEEEEEEC-CCcEEEEec
Q psy13969 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSN--M-NNVKTFQGHKESIRGISFS----PSDSKFATCSD-DGTVRVWDF 229 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~--~-~~~~~~~~h~~~V~~i~~s----p~~~~l~sgs~-Dg~I~iwd~ 229 (877)
....+..++||||+++|++++.++.|.+||+. + ..+..+.... ....++|+ ||+++|++++. +++|.|||.
T Consensus 195 ~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~ 273 (567)
T 1qks_A 195 TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDG 273 (567)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEET
T ss_pred CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEEC
Confidence 44567899999999999999999999999984 3 4445555433 35789999 69998887765 589999999
Q ss_pred cCCeeeEEeccC-----------CCCeEEEEEcCCCCEEE-EEecCCcccEEEEcCCCCceeE--EeccCCCCeeEEEEc
Q psy13969 230 YRCTEEKVLRGH-----------GADVKCVDWHPYKSLIV-SGSKDNQQPVKLWDPKAGQALA--TLHAHKSTVMDLAWN 295 (877)
Q Consensus 230 ~~~~~~~~l~~h-----------~~~v~~v~~sp~~~~l~-sgs~dg~~~I~iwd~~~~~~~~--~~~~h~~~V~~l~~s 295 (877)
.+.+.+..+... ...+..+.+++++..++ +...++. |.++|..+.+.+. .+ .......++.|+
T Consensus 274 ~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~--v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~ 350 (567)
T 1qks_A 274 ETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK--ILLVDYTDLNNLKTTEI-SAERFLHDGGLD 350 (567)
T ss_dssp TTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE--EEEEETTCSSEEEEEEE-ECCSSEEEEEEC
T ss_pred CCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe--EEEEecCCCccceeeee-eccccccCceEC
Confidence 998888776532 12678888888876544 4444566 9999988654322 22 234567789999
Q ss_pred cCCCeEEEEe-CCCeEEEEEcCCCCcceEEEec-----CCCCeEEEEEcCCCCcEEEEEe-CCCcEEEEEcCC-------
Q psy13969 296 QNGNWLVTAS-RDHLLKVFDIRNLSSEVQTFRG-----HKKEASAVAWHPQHEGLFSSGG-ADGSIMFWHVGA------- 361 (877)
Q Consensus 296 p~g~~l~s~s-~Dg~I~iwd~~~~~~~~~~~~~-----h~~~v~~i~~~p~~~~~l~sgs-~dg~I~iwd~~~------- 361 (877)
+++++|++++ .+..|.++|+.+ .+.+..+.. |......+ ++|++..++++.. .+++|.++|...
T Consensus 351 pdgr~~~va~~~sn~V~ViD~~t-~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~ 428 (567)
T 1qks_A 351 GSHRYFITAANARNKLVVIDTKE-GKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNA 428 (567)
T ss_dssp TTSCEEEEEEGGGTEEEEEETTT-TEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTB
T ss_pred CCCCEEEEEeCCCCeEEEEECCC-CcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCcccc
Confidence 9999987766 578899999998 455555443 32212222 5787555666664 468999999987
Q ss_pred CceeEEecCcCCCCEEEEEEcCCCCEEEEEEc-------CCeEEEEeCCCC-----CCCcccccccC---Ccceeeeeee
Q psy13969 362 DKEVGCIPQAHDNIIWTMAWHPLGHILATGSN-------DHASKFWTRNRL-----GDPMRDRYNQK---GLAHCITGVY 426 (877)
Q Consensus 362 ~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~-------dg~v~iwd~~~~-----~~~~~~~~~~~---~~~~~~~~v~ 426 (877)
.+.+..+. .....-..|.++|++++|.+... ..+|.+||+.+. ..... ..... .+......+.
T Consensus 429 ~kvv~~i~-~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~ 506 (567)
T 1qks_A 429 WKILDSFP-ALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFK-TLPIAEWAGITEGQPRVV 506 (567)
T ss_dssp TSEEEEEE-CSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEE-EECHHHHHTCCSSCCEEE
T ss_pred CEEEEEEe-cCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcE-EeccccccccCCCCcceE
Confidence 55666663 22223345778999999888763 459999999865 11101 01000 1111234578
Q ss_pred eeeccCCCCeEEeccC----CCCeeeecCCCC
Q psy13969 427 NEEMELNDSAVIPGMG----LEDEDSVFPSSE 454 (877)
Q Consensus 427 ~~~~~~d~~~l~~~~g----~d~~~~~~~~~~ 454 (877)
.+.|++++.+++++.. .++.|.+++..+
T Consensus 507 ~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t 538 (567)
T 1qks_A 507 QGEFNKDGTEVWFSVWNGKDQESALVVVDDKT 538 (567)
T ss_dssp EEEECTTSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred eeeECCCCCEEEEEeecCCCCCCcEEEEECCC
Confidence 8899999999988743 256777766544
No 192
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.53 E-value=2.6e-11 Score=128.75 Aligned_cols=268 Identities=9% Similarity=-0.021 Sum_probs=185.4
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEc--cCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeE
Q psy13969 159 DCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQ--GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEK 236 (877)
Q Consensus 159 ~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~--~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~ 236 (877)
...+.+|++.++++++++...++.|.+|+.+ ..+..+. .+...+.+|+++++++++++...++.|.+||.. ++...
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~ 96 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTE 96 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEE
Confidence 4567889999999988887788999999987 5444332 334678999999999887777668899999987 44432
Q ss_pred -EeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeE-EeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEE
Q psy13969 237 -VLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALA-TLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD 314 (877)
Q Consensus 237 -~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~-~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd 314 (877)
.+......+.+++++++++++++...++. |..||.. ++... .+......+.+|+++++++++++...++.|.+||
T Consensus 97 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~--i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 173 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGLNGDIWFTQLNGDR--IGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRIT 173 (300)
T ss_dssp EECSSTTCCEEEEEECSTTCEEEEETTTTE--EEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred ecCCCCCCCCccceECCCCCEEEEccCCCe--EEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEEC
Confidence 22224467899999999988777666666 9999987 55442 2333456789999999999777666678899999
Q ss_pred cCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcC
Q psy13969 315 IRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSND 394 (877)
Q Consensus 315 ~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~d 394 (877)
... ......+..+...+..|++++++. ++++....+.|.+||. ++.........+...+.+++++++++++++...+
T Consensus 174 ~~g-~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 250 (300)
T 2qc5_A 174 NTG-KLEEYPLPTNAAAPVGITSGNDGA-LWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGA 250 (300)
T ss_dssp TTC-CEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred CCC-cEEEeeCCCCCCCcceEEECCCCC-EEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCC
Confidence 832 222112223445788999999886 7766666778999998 4443333223345678999999999877776667
Q ss_pred CeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEecc
Q psy13969 395 HASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGM 441 (877)
Q Consensus 395 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~ 441 (877)
+.|.+|+.. +.. . .+. +......+.++.++.++..+++..
T Consensus 251 ~~i~~~~~~--g~~-~-~~~---~~~~~~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 251 NQIGRITND--NTI-Q-EYQ---LQTENAEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp TEEEEECTT--SCE-E-EEE---CCSTTCCCCCEEECTTSCEEEECS
T ss_pred CeEEEECCC--CcE-E-EEE---CCccCCccceeEeCCCCCEEEEcc
Confidence 899999873 211 1 111 111123356677777777666543
No 193
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.52 E-value=1.8e-12 Score=138.05 Aligned_cols=231 Identities=10% Similarity=0.032 Sum_probs=164.5
Q ss_pred cceEEEccCCCCeeEEEEcCCCC-EEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEE
Q psy13969 191 NNVKTFQGHKESIRGISFSPSDS-KFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVK 269 (877)
Q Consensus 191 ~~~~~~~~h~~~V~~i~~sp~~~-~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~ 269 (877)
..+..+..+.....+++|+++++ ++++...++.|.+||..+. ...+..+...+.+++|+++++++++...++. |.
T Consensus 18 ~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~--i~ 93 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRR--LE 93 (296)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTE--EE
T ss_pred CcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCe--EE
Confidence 34556666777889999999998 7777888999999999876 5666667788999999999998777666666 99
Q ss_pred EEcCCCCceeEEeccC----CCCeeEEEEccCCCeEEEEeC-----------------CCeEEEEEcCCCCcceEEEecC
Q psy13969 270 LWDPKAGQALATLHAH----KSTVMDLAWNQNGNWLVTASR-----------------DHLLKVFDIRNLSSEVQTFRGH 328 (877)
Q Consensus 270 iwd~~~~~~~~~~~~h----~~~V~~l~~sp~g~~l~s~s~-----------------Dg~I~iwd~~~~~~~~~~~~~h 328 (877)
+||..+++........ ...+.+++++++++++++.+. .+.|..||.. ..+..+..+
T Consensus 94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~---g~~~~~~~~ 170 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD---GTLSAPIRD 170 (296)
T ss_dssp EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT---SCEEEEECC
T ss_pred EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC---CCEEEeecC
Confidence 9999887754433221 235678999999998887431 2345555543 234555566
Q ss_pred CCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcC-CCce---eEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 329 KKEASAVAWHPQHEGLFSSGGADGSIMFWHVG-ADKE---VGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 329 ~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~-~~~~---~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
......++|++++..+ ++.+.++.|++||+. .+.. ...+ ..+...+..++++++++++++. ++.|.+|+.+
T Consensus 171 ~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~- 245 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD- 245 (296)
T ss_dssp CSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-
T ss_pred CCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-
Confidence 6778999999999855 788888999999997 4433 2333 3455667789999999877666 8899999975
Q ss_pred CCCCcccccccCCcceeeeeeeeeec-cCCCCeEEecc
Q psy13969 405 LGDPMRDRYNQKGLAHCITGVYNEEM-ELNDSAVIPGM 441 (877)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~v~~~~~-~~d~~~l~~~~ 441 (877)
+..+.. + ..... +.+++| .++...|++++
T Consensus 246 -g~~~~~-~-----~~~~~-~~~~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 246 -GDELGR-V-----LTPQT-TSNLCFGGPEGRTLYMTV 275 (296)
T ss_dssp -SCEEEE-E-----ECSSC-CCEEEEESTTSCEEEEEE
T ss_pred -CCEEEE-E-----ECCCC-ceeEEEECCCCCEEEEEc
Confidence 222211 1 11112 566777 46777777655
No 194
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.51 E-value=7.4e-13 Score=159.11 Aligned_cols=247 Identities=11% Similarity=0.009 Sum_probs=164.3
Q ss_pred cCCCCeeEEEEcCCCCEEEEEE-----CCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCc-------
Q psy13969 198 GHKESIRGISFSPSDSKFATCS-----DDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQ------- 265 (877)
Q Consensus 198 ~h~~~V~~i~~sp~~~~l~sgs-----~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~------- 265 (877)
.|...+.+++||||+++||.+. .+.+|++||+.+++.+...........+++|+||++.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence 3555799999999999988443 3468999999988764111111112268999999999998887642
Q ss_pred ----ccEEEEcCCCCce----eEEeccCCCCeeEEEEccCCCeEEEEeCCC----eEEEEEcCCCCcceEEEecCCCCeE
Q psy13969 266 ----QPVKLWDPKAGQA----LATLHAHKSTVMDLAWNQNGNWLVTASRDH----LLKVFDIRNLSSEVQTFRGHKKEAS 333 (877)
Q Consensus 266 ----~~I~iwd~~~~~~----~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg----~I~iwd~~~~~~~~~~~~~h~~~v~ 333 (877)
..|++|++.+... +.....|...+.++.||+|+++|++.+.+. .|++||... .....+..+...+.
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~--~~~~~l~~~~~~~~ 275 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGE--KDFRLLVKGVGAKY 275 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTC--SSCEEEEECSSCCE
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCC--CceEEeecCCCceE
Confidence 2399999987762 223334556889999999999999888766 577776543 24555666666677
Q ss_pred EEEEcCCCCcEEEEEeC---CCcEEEEEcCCCce--eEEecCcC-CCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCC
Q psy13969 334 AVAWHPQHEGLFSSGGA---DGSIMFWHVGADKE--VGCIPQAH-DNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGD 407 (877)
Q Consensus 334 ~i~~~p~~~~~l~sgs~---dg~I~iwd~~~~~~--~~~~~~~h-~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~ 407 (877)
...| +++. ++++... +..|.+||+.+... ...+...+ ...|.+++|+ ++.++++...|+..+||.++..+.
T Consensus 276 ~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~ 352 (695)
T 2bkl_A 276 EVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGK 352 (695)
T ss_dssp EEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred EEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCC
Confidence 7777 5666 7666653 57899999977653 23332233 5568889998 678899999999999887753232
Q ss_pred CcccccccCCcceeeeeeeeeeccCCCCeEEeccC---CCCeeeecCCCC
Q psy13969 408 PMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMG---LEDEDSVFPSSE 454 (877)
Q Consensus 408 ~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g---~d~~~~~~~~~~ 454 (877)
..... .+ .....+..+.+++++..++.... ....+++|+..+
T Consensus 353 ~~~~l----~~-~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 353 PVRTV----QL-PGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp EEEEC----CC-SSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTT
T ss_pred eeEEe----cC-CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 21111 01 11234566777777776664432 234667776544
No 195
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.51 E-value=5.3e-12 Score=136.80 Aligned_cols=259 Identities=8% Similarity=0.032 Sum_probs=177.7
Q ss_pred CCCeEEEEeCCCcceEEEc-------cCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEc
Q psy13969 179 HQGYIKYWQSNMNNVKTFQ-------GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWH 251 (877)
Q Consensus 179 ~dg~v~iwd~~~~~~~~~~-------~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~s 251 (877)
.++.|.+||.++..+.... .......+|++. .++++++...++.|.+||..+++.+..+. .......|+++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~ 92 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFL 92 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEe
Confidence 4889999998876654311 122446778885 34455555667899999999999888885 45678999998
Q ss_pred CCCCEEEEEecCCcccEEEEcCCCCceeEEeccCC-----CCeeEEEEccCCCeEEEEe--CCCeEEEEEcCCCCcceEE
Q psy13969 252 PYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHK-----STVMDLAWNQNGNWLVTAS--RDHLLKVFDIRNLSSEVQT 324 (877)
Q Consensus 252 p~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~-----~~V~~l~~sp~g~~l~s~s--~Dg~I~iwd~~~~~~~~~~ 324 (877)
+++.++++...++. |.+||+.+.+.+..+.... .....|++ ++..|+++. .+++|.+||+.+ ...+..
T Consensus 93 ~~g~lyv~~~~~~~--v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t-~~~~~~ 167 (328)
T 3dsm_A 93 SDEKAYVTQIWDYR--IFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTET-DKVVDE 167 (328)
T ss_dssp ETTEEEEEEBSCSE--EEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTT-TEEEEE
T ss_pred CCCeEEEEECCCCe--EEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCC-CeEEEE
Confidence 88854444437777 9999999998877765433 14567777 344555554 488999999987 455555
Q ss_pred EecCCCCeEEEEEcCCCCcEEEEEeCC----------CcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcC
Q psy13969 325 FRGHKKEASAVAWHPQHEGLFSSGGAD----------GSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSND 394 (877)
Q Consensus 325 ~~~h~~~v~~i~~~p~~~~~l~sgs~d----------g~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~d 394 (877)
+.. ......+++++++. +++++..+ +.|.+||..+.+.+..+..........++|++++++|+++..
T Consensus 168 i~~-g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~- 244 (328)
T 3dsm_A 168 LTI-GIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN- 244 (328)
T ss_dssp EEC-SSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-
T ss_pred EEc-CCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-
Confidence 553 33457899999987 66665544 789999999888776663322346899999999998888765
Q ss_pred CeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEecc----CCCCeeeecCCC
Q psy13969 395 HASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGM----GLEDEDSVFPSS 453 (877)
Q Consensus 395 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~----g~d~~~~~~~~~ 453 (877)
.|.+||..+.... .... +.........+++++++..++.+. ...+.+.+|+..
T Consensus 245 -~v~~~d~~t~~~~-~~~~----~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 245 -DIWRMPVEADRVP-VRPF----LEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp -SEEEEETTCSSCC-SSCS----BCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred -EEEEEECCCCcee-eeee----ecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 8999998653321 1110 111124467788998555554443 356788888765
No 196
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.50 E-value=3.3e-12 Score=138.39 Aligned_cols=232 Identities=12% Similarity=0.066 Sum_probs=165.2
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcce-EEEccCCCCeeEEEEcCCCCEEEEEE-CCCcEEEEeccCCeeeEE
Q psy13969 160 CAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNV-KTFQGHKESIRGISFSPSDSKFATCS-DDGTVRVWDFYRCTEEKV 237 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~-~~~~~h~~~V~~i~~sp~~~~l~sgs-~Dg~I~iwd~~~~~~~~~ 237 (877)
.....+++. +++++++...++.|.+||..+..+ ..+. .......|+++++++ |+++. .++.|.+||+.+.+....
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~-lyv~~~~~~~v~~iD~~t~~~~~~ 120 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEK-AYVTQIWDYRIFIINPKTYEITGY 120 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTE-EEEEEBSCSEEEEEETTTTEEEEE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCe-EEEEECCCCeEEEEECCCCeEEEE
Confidence 345667774 455666667789999999887655 4553 456788999988884 55555 899999999999887776
Q ss_pred eccCC-----CCeEEEEEcCCCCEEEEEe--cCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCC---
Q psy13969 238 LRGHG-----ADVKCVDWHPYKSLIVSGS--KDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRD--- 307 (877)
Q Consensus 238 l~~h~-----~~v~~v~~sp~~~~l~sgs--~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~D--- 307 (877)
+.... .....|++ ++..|+++. .++. |.+||+.+++.+..+.. ......+++++++++++++..+
T Consensus 121 i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~--v~viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~ 195 (328)
T 3dsm_A 121 IECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNR--ILKIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEG 195 (328)
T ss_dssp EECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCE--EEEEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTT
T ss_pred EEcCCccccCCCcceEEE--ECCEEEEEcCCCCCE--EEEEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccC
Confidence 65332 14567777 355555555 3666 99999999988887765 3456789999999877776655
Q ss_pred -------CeEEEEEcCCCCcceEEEecC-CCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEe-cCcCCCCEEE
Q psy13969 308 -------HLLKVFDIRNLSSEVQTFRGH-KKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCI-PQAHDNIIWT 378 (877)
Q Consensus 308 -------g~I~iwd~~~~~~~~~~~~~h-~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~-~~~h~~~V~~ 378 (877)
+.|.+||..+ .+.+..+... ......++|++++..++++ .. .|.+||+.+.+..... ...+......
T Consensus 196 ~~~~~~~~~v~~id~~t-~~v~~~~~~~~g~~p~~la~~~d~~~lyv~-~~--~v~~~d~~t~~~~~~~~~~~~~~~p~g 271 (328)
T 3dsm_A 196 SPYGYEAPSLYRIDAET-FTVEKQFKFKLGDWPSEVQLNGTRDTLYWI-NN--DIWRMPVEADRVPVRPFLEFRDTKYYG 271 (328)
T ss_dssp CSSCBCCCEEEEEETTT-TEEEEEEECCTTCCCEEEEECTTSCEEEEE-SS--SEEEEETTCSSCCSSCSBCCCSSCEEE
T ss_pred CccccCCceEEEEECCC-CeEEEEEecCCCCCceeEEEecCCCEEEEE-cc--EEEEEECCCCceeeeeeecCCCCceEE
Confidence 7899999887 3444454432 2468999999998855544 33 8999999887653211 1112467899
Q ss_pred EEEcCC-CCEEEEE----EcCCeEEEEeCC
Q psy13969 379 MAWHPL-GHILATG----SNDHASKFWTRN 403 (877)
Q Consensus 379 v~~sp~-g~~l~sg----~~dg~v~iwd~~ 403 (877)
++++|+ +.++++. ..++.|.+||.+
T Consensus 272 i~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 272 LTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp EEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred EEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 999994 5666665 568899999986
No 197
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.49 E-value=1.8e-12 Score=142.49 Aligned_cols=266 Identities=11% Similarity=0.011 Sum_probs=176.6
Q ss_pred CCCEEEEEe------CCCeEEEEeCCCcc-eEEEccCCCCeeEEEEcCCCCEEEEEEC----------CCcEEEEeccCC
Q psy13969 170 NGLWMVTSD------HQGYIKYWQSNMNN-VKTFQGHKESIRGISFSPSDSKFATCSD----------DGTVRVWDFYRC 232 (877)
Q Consensus 170 d~~~l~sg~------~dg~v~iwd~~~~~-~~~~~~h~~~V~~i~~sp~~~~l~sgs~----------Dg~I~iwd~~~~ 232 (877)
+++++++.+ .|+.|++||..+.. +..+..+..+ .|+|+||+++|++++. +++|.+||+.+.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 445555443 36799999976544 4455555544 8999999999999873 678999999988
Q ss_pred eeeEEeccC------CCCeEEEEEcCCCCEEEEEec--CCcccEEEEcCCCCceeEE-eccCCCCeeEEEEccCC-CeEE
Q psy13969 233 TEEKVLRGH------GADVKCVDWHPYKSLIVSGSK--DNQQPVKLWDPKAGQALAT-LHAHKSTVMDLAWNQNG-NWLV 302 (877)
Q Consensus 233 ~~~~~l~~h------~~~v~~v~~sp~~~~l~sgs~--dg~~~I~iwd~~~~~~~~~-~~~h~~~V~~l~~sp~g-~~l~ 302 (877)
+.+..+... ......++|+|++++|+++.. ++. |.+||+.+.+.+.. +.. . ....+.+.|++ ..++
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~--v~v~d~~~~~~~~~~i~~-~-~~~~v~~~p~~~~~~~ 167 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATS--IGIVDVAKGDYVEDVTAA-A-GCWSVIPQPNRPRSFM 167 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEE--EEEEETTTTEEEEEEGGG-T-TEEEEEECTTSSSEEE
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCe--EEEEECCCCcEEEEEecC-C-CcceeEEcCCCCeeEE
Confidence 887776532 345678999999999998875 355 99999999988877 543 2 22335667765 6788
Q ss_pred EEeCCCeEEEEEcCCCCcceEEE------ecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCcee--EEec--C--
Q psy13969 303 TASRDHLLKVFDIRNLSSEVQTF------RGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEV--GCIP--Q-- 370 (877)
Q Consensus 303 s~s~Dg~I~iwd~~~~~~~~~~~------~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~--~~~~--~-- 370 (877)
+.+.|+.+.+|++.......... ..+...+ .+.+++++.. ++..+.++.|.+||+...... ..+. .
T Consensus 168 ~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~-~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~ 245 (361)
T 2oiz_A 168 TICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDK-AHFVSYYGNVYSADFSGDEVKVDGPWSLLNDE 245 (361)
T ss_dssp EEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSE-EEEEBTTSEEEEEECSSSSCEEEEEEESCCHH
T ss_pred EECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCE-EEEEeCCCeEEEEEecCCCceecccccccCcc
Confidence 88999999999986533333111 1112221 2334566653 444567899999999754321 1110 0
Q ss_pred -cCC----CCEEEEEEcCCCCEEEEEEc-----------CCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCC
Q psy13969 371 -AHD----NIIWTMAWHPLGHILATGSN-----------DHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELND 434 (877)
Q Consensus 371 -~h~----~~V~~v~~sp~g~~l~sg~~-----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~ 434 (877)
.+. .....++|+++++.|+++.. ...|.+||+.+.... . .+.... ...++|++|+
T Consensus 246 ~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v-~------~i~~~~--p~~ia~spdg 316 (361)
T 2oiz_A 246 DKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRV-A------RIPGRD--ALSMTIDQQR 316 (361)
T ss_dssp HHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEE-E------EEECTT--CCEEEEETTT
T ss_pred ccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEE-E------EEecCC--eeEEEECCCC
Confidence 000 11112789999887777654 348999998763211 1 111111 7888999999
Q ss_pred CeEEeccCCCCeeeecCCCC
Q psy13969 435 SAVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 435 ~~l~~~~g~d~~~~~~~~~~ 454 (877)
.+++++.. +.+.+|+..+
T Consensus 317 ~~l~v~n~--~~v~v~D~~t 334 (361)
T 2oiz_A 317 NLMLTLDG--GNVNVYDISQ 334 (361)
T ss_dssp TEEEEECS--SCEEEEECSS
T ss_pred CEEEEeCC--CeEEEEECCC
Confidence 98887653 8999997655
No 198
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.48 E-value=1.4e-11 Score=137.45 Aligned_cols=236 Identities=9% Similarity=0.033 Sum_probs=170.3
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCC--cEEEEeccCCeeeEE
Q psy13969 160 CAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDG--TVRVWDFYRCTEEKV 237 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg--~I~iwd~~~~~~~~~ 237 (877)
.....|+|+++++++++...++.|++||.+...+..+........ ++|++++++|+++..++ .|.+||.........
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence 468899999999988888888999999998777766554444445 99999999999988866 788998866544334
Q ss_pred e----ccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEE----eccCCCCe--eEEEEccC-CCeEEEEeC
Q psy13969 238 L----RGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALAT----LHAHKSTV--MDLAWNQN-GNWLVTASR 306 (877)
Q Consensus 238 l----~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~----~~~h~~~V--~~l~~sp~-g~~l~s~s~ 306 (877)
+ ..+...+.+++++++...|+++..++. |+.||..+...... ...+...- ..|+|+++ +.++++-..
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~--I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKN--FGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECTTCE--EEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEECCCc--EEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 4 224567889999996555666666666 99999987753322 22222222 39999995 566666667
Q ss_pred CCeEEEEEcCCCCcceEEEecCC---------------CCeEEEEEcCCCCcEEEEEe-CCCcEEEEEcCCCceeEEecC
Q psy13969 307 DHLLKVFDIRNLSSEVQTFRGHK---------------KEASAVAWHPQHEGLFSSGG-ADGSIMFWHVGADKEVGCIPQ 370 (877)
Q Consensus 307 Dg~I~iwd~~~~~~~~~~~~~h~---------------~~v~~i~~~p~~~~~l~sgs-~dg~I~iwd~~~~~~~~~~~~ 370 (877)
++.|+.||.... +..+.++. .....|+|++++. ++++-+ .++.|++||+.++......-.
T Consensus 288 ~~~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~G~v~~~~g~ 363 (409)
T 3hrp_A 288 LSSVYKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILDGYVSTVAGQ 363 (409)
T ss_dssp TTEEEEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCCCEEEEEeCC
Confidence 889999997652 33443332 3578999999988 788877 788999999877654332211
Q ss_pred -------------cCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeC
Q psy13969 371 -------------AHDNIIWTMAWHPLGHILATGSNDHASKFWTR 402 (877)
Q Consensus 371 -------------~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~ 402 (877)
..-.....|++++++.++++-..++.|+.+++
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 01245889999999888888778888888775
No 199
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.47 E-value=5.6e-12 Score=132.02 Aligned_cols=240 Identities=9% Similarity=0.020 Sum_probs=164.8
Q ss_pred CeeEEEEcCCCCEEE-EEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeE
Q psy13969 202 SIRGISFSPSDSKFA-TCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALA 280 (877)
Q Consensus 202 ~V~~i~~sp~~~~l~-sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~ 280 (877)
...+|++++++++++ +.+.++.|.+||..+.........+...+.+|+++++++++++.. ++. |.+||........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~--i~~~d~~~~~~~~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNR--VVTLAAGSNNQTV 101 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTE--EEEECTTCSCCEE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCE--EEEEeCCCceEee
Confidence 678999999998777 446788999999765443322223445688999999988666555 666 9999987654432
Q ss_pred EeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcC
Q psy13969 281 TLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVG 360 (877)
Q Consensus 281 ~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~ 360 (877)
........+..|+++++++++++...++.|.+||.... ............+..|++++++. ++++...++.|.+||..
T Consensus 102 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~-~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSK-TQTVLPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp CCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCC-SCEECCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEEECTT
T ss_pred eecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCc-eeEeeccccCCCceeEEEeCCCC-EEEEECCCCEEEEEecC
Confidence 22223367899999999988777777889999986552 22222222334678899999887 77777778899999987
Q ss_pred CCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEec
Q psy13969 361 ADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPG 440 (877)
Q Consensus 361 ~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~ 440 (877)
........ ..+...+.+|++++++.++++...++.|.+|+....... .. ..........+++++++..+++.
T Consensus 180 ~~~~~~~~-~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~---~~----~~~~~~~p~~i~~~~~g~l~v~~ 251 (270)
T 1rwi_B 180 SNNQVVLP-FTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST---VL----PFTGLNTPLAVAVDSDRTVYVAD 251 (270)
T ss_dssp TCCEEECC-CSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE---EC----CCCSCSCEEEEEECTTCCEEEEE
T ss_pred CCceEeec-ccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce---ee----ccCCCCCceeEEECCCCCEEEEE
Confidence 76554332 233367899999999987777777889999998642111 11 11122456788898888755554
Q ss_pred cCCCCeeeecCCCCc
Q psy13969 441 MGLEDEDSVFPSSEP 455 (877)
Q Consensus 441 ~g~d~~~~~~~~~~~ 455 (877)
..++.+.++...+.
T Consensus 252 -~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 252 -RGNDRVVKLTSLEH 265 (270)
T ss_dssp -GGGTEEEEECCCGG
T ss_pred -CCCCEEEEEcCCCc
Confidence 46778888876654
No 200
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.44 E-value=3.6e-10 Score=119.86 Aligned_cols=234 Identities=9% Similarity=0.018 Sum_probs=166.3
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEc--cCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeE
Q psy13969 159 DCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQ--GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEK 236 (877)
Q Consensus 159 ~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~--~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~ 236 (877)
...+.+|++.+++.++++...++.|.+||.+ .....+. .....+.+|++.++++++++...++.|.+||.. ++...
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~ 138 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE 138 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEE
Confidence 3678999999999988887778999999987 4444332 234678999999999888877768899999986 44432
Q ss_pred E-eccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEE-eccCCCCeeEEEEccCCCeEEEEeCCCeEEEEE
Q psy13969 237 V-LRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALAT-LHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD 314 (877)
Q Consensus 237 ~-l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~-~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd 314 (877)
. +......+.+++++++++++++...++. |.+||. +++.... +..+...+..|+++++++++++....+.|.+||
T Consensus 139 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~--i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 215 (300)
T 2qc5_A 139 YDLPNKGSYPAFITLGSDNALWFTENQNNS--IGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRIT 215 (300)
T ss_dssp EECSSTTCCEEEEEECTTSSEEEEETTTTE--EEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred ccCCCCCCCceeEEECCCCCEEEEecCCCe--EEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEc
Confidence 2 3334567899999999996666655666 999998 5544332 223445789999999988777766777899999
Q ss_pred cCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcC
Q psy13969 315 IRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSND 394 (877)
Q Consensus 315 ~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~d 394 (877)
... ......+..+...+.+|++++++. ++++...++.|.+||.. +.............+.+++++++++++++.. .
T Consensus 216 ~~g-~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~ 291 (300)
T 2qc5_A 216 TTG-EISEYDIPTPNARPHAITAGKNSE-IWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALK-C 291 (300)
T ss_dssp TTC-CEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECS-S
T ss_pred CCC-cEEEEECCCCCCCceEEEECCCCC-EEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEcc-C
Confidence 832 222222333456789999999987 77766667899999984 4333221123345688999999998666654 4
Q ss_pred CeEEEEeC
Q psy13969 395 HASKFWTR 402 (877)
Q Consensus 395 g~v~iwd~ 402 (877)
.|..++.
T Consensus 292 -~i~~~~p 298 (300)
T 2qc5_A 292 -KIGKLNL 298 (300)
T ss_dssp -EEEEEEE
T ss_pred -ceEEeCC
Confidence 6776664
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.43 E-value=4.4e-11 Score=127.51 Aligned_cols=225 Identities=9% Similarity=0.081 Sum_probs=155.0
Q ss_pred EEEEEEcCCC-CEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEecc
Q psy13969 162 VRHMVWSHNG-LWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRG 240 (877)
Q Consensus 162 V~~l~~spd~-~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~ 240 (877)
.-+..|+++. .++++....+.|+.||.++.....+. +...+.+++++++++++++ . +..|.+||..+++.......
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~ 91 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATV 91 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEEC
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEec
Confidence 4567788854 45556667899999998877665443 4577999999999995554 4 56899999987765433322
Q ss_pred ----CCCCeEEEEEcCCCCEEEEEecC---------CcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEE-EeC
Q psy13969 241 ----HGADVKCVDWHPYKSLIVSGSKD---------NQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVT-ASR 306 (877)
Q Consensus 241 ----h~~~v~~v~~sp~~~~l~sgs~d---------g~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s-~s~ 306 (877)
....+++++++++++++++.... ....|+.+|.. ++ +..+..+....+.++|+++++.|++ .+.
T Consensus 92 ~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~-~~~~~~~~~~pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 92 DNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HH-VKKYFDQVDISNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp CTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SC-EEEEEEEESBEEEEEECTTSCEEEEEEGG
T ss_pred CCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CC-EEEEeeccccccceEEcCCCCEEEEecCC
Confidence 12457889999999977655332 22125555543 33 2233334455788999999987655 456
Q ss_pred CCeEEEEEcC-CCCcc-----eEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEE
Q psy13969 307 DHLLKVFDIR-NLSSE-----VQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMA 380 (877)
Q Consensus 307 Dg~I~iwd~~-~~~~~-----~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~ 380 (877)
++.|.+||+. ..... +..+..+......+++++++. ++++....+.|.+||..+++.+..+ ..+...+++++
T Consensus 170 ~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~tG~~~~~i-~~p~~~~t~~~ 247 (297)
T 3g4e_A 170 SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVTGKRLQTV-KLPVDKTTSCC 247 (297)
T ss_dssp GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTTCCEEEEE-ECSSSBEEEEE
T ss_pred CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCCceEEEEE-ECCCCCceEEE
Confidence 7889999974 11211 122223345678899999986 7777777888999999988888777 44556799999
Q ss_pred Ec-CCCCEEEEEEc
Q psy13969 381 WH-PLGHILATGSN 393 (877)
Q Consensus 381 ~s-p~g~~l~sg~~ 393 (877)
|. ++++.|++++.
T Consensus 248 f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 248 FGGKNYSEMYVTCA 261 (297)
T ss_dssp EESGGGCEEEEEEB
T ss_pred EeCCCCCEEEEEcC
Confidence 98 78776666554
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.43 E-value=9e-12 Score=150.74 Aligned_cols=247 Identities=12% Similarity=0.057 Sum_probs=161.4
Q ss_pred CCCCeeEEEEcCCCCEEEEEECC-----CcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCc--------
Q psy13969 199 HKESIRGISFSPSDSKFATCSDD-----GTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQ-------- 265 (877)
Q Consensus 199 h~~~V~~i~~sp~~~~l~sgs~D-----g~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~-------- 265 (877)
|...+..++||||+++||.++.+ .+|++||+.+++.+... .+...+.+++|+|| +.|+.++.+..
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 33468899999999999887764 46999999988765432 12223467899999 98888876542
Q ss_pred ----ccEEEEcCCCCce--eEEec--cCCCCeeEEEEccCCCeEEEEeCCC-----eEEEEEcCCCCcc-eEEEecCCCC
Q psy13969 266 ----QPVKLWDPKAGQA--LATLH--AHKSTVMDLAWNQNGNWLVTASRDH-----LLKVFDIRNLSSE-VQTFRGHKKE 331 (877)
Q Consensus 266 ----~~I~iwd~~~~~~--~~~~~--~h~~~V~~l~~sp~g~~l~s~s~Dg-----~I~iwd~~~~~~~-~~~~~~h~~~ 331 (877)
..|++|++.+... ...+. .+...+.++.||+|+++|+..+.+. .|++||+.+.... ...+..+...
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc
Confidence 1388999877652 22332 2334689999999999998887544 7999999873223 5556656555
Q ss_pred eEEEEEcCCCCcEEEEEeC---CCcEEEEEcCCC-ceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCC
Q psy13969 332 ASAVAWHPQHEGLFSSGGA---DGSIMFWHVGAD-KEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGD 407 (877)
Q Consensus 332 v~~i~~~p~~~~~l~sgs~---dg~I~iwd~~~~-~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~ 407 (877)
+.... ++++..+++.... +..|.+||+.+. .....+...+...+.+++|+ ++.++++...|+..+||.++..+.
T Consensus 319 ~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~ 396 (741)
T 1yr2_A 319 QWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGK 396 (741)
T ss_dssp CEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSC
T ss_pred eEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCC
Confidence 55554 4788755555433 345999999874 23334434555567788888 667889999999988887653222
Q ss_pred CcccccccCCcceeeeeeeeeeccCCCCeEEeccC---CCCeeeecCCCC
Q psy13969 408 PMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMG---LEDEDSVFPSSE 454 (877)
Q Consensus 408 ~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g---~d~~~~~~~~~~ 454 (877)
..... .+ .....+..+.+++++..++..+. ....+++|+..+
T Consensus 397 ~~~~l----~~-~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 397 PAGAV----SL-PGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp EEEEC----BC-SSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred ceeec----cC-CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 21111 01 11234667778887776654332 235677776544
No 203
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.40 E-value=2.9e-11 Score=144.93 Aligned_cols=242 Identities=13% Similarity=0.077 Sum_probs=164.7
Q ss_pred ccCCEEEEEEcCCCCEEEEEe-----CCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCc---------
Q psy13969 158 HDCAVRHMVWSHNGLWMVTSD-----HQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGT--------- 223 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l~sg~-----~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~--------- 223 (877)
|...|..++||||+++||.+. ...+|++||+++........+......++|+ |++.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~ 205 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSART 205 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------C
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccC
Confidence 556788999999999888432 2357999999887654432222123578999 9999999988743
Q ss_pred ----EEEEeccCCee--eEEec--c-CCCCeEEEEEcCCCCEEEEEecCC-c-ccEEEEcCCCCc-eeEEeccCCCCeeE
Q psy13969 224 ----VRVWDFYRCTE--EKVLR--G-HGADVKCVDWHPYKSLIVSGSKDN-Q-QPVKLWDPKAGQ-ALATLHAHKSTVMD 291 (877)
Q Consensus 224 ----I~iwd~~~~~~--~~~l~--~-h~~~v~~v~~sp~~~~l~sgs~dg-~-~~I~iwd~~~~~-~~~~~~~h~~~V~~ 291 (877)
|++|++.+... ...+. . |...+.++.|++|+++|+..+..+ . ..|+++|+.+.. ....+..+...+..
T Consensus 206 ~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~ 285 (693)
T 3iuj_A 206 DQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVS 285 (693)
T ss_dssp CCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEE
T ss_pred CCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEE
Confidence 99999976543 22332 2 444578899999999876544321 1 139999998764 45566666666665
Q ss_pred EEEccCCCeEEEEeC-C---CeEEEEEcCCCCc-ceEEEecCCCCeEEEEEcCCCCcEEEEEeCCC--cEEEEEcCCCce
Q psy13969 292 LAWNQNGNWLVTASR-D---HLLKVFDIRNLSS-EVQTFRGHKKEASAVAWHPQHEGLFSSGGADG--SIMFWHVGADKE 364 (877)
Q Consensus 292 l~~sp~g~~l~s~s~-D---g~I~iwd~~~~~~-~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg--~I~iwd~~~~~~ 364 (877)
. |++++..|+..+. + ..|.++|+..... ....+..|...+. .|++++..++++...++ .|++||+... .
T Consensus 286 ~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~-~ 361 (693)
T 3iuj_A 286 L-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK-R 361 (693)
T ss_dssp E-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC-E
T ss_pred E-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC-e
Confidence 5 6666666655543 3 5799999886332 2355666766665 88999887777776666 6888998754 3
Q ss_pred eEEecCcCCCCEEEEEEcCCCCEEEEEEcC----CeEEEEeCCC
Q psy13969 365 VGCIPQAHDNIIWTMAWHPLGHILATGSND----HASKFWTRNR 404 (877)
Q Consensus 365 ~~~~~~~h~~~V~~v~~sp~g~~l~sg~~d----g~v~iwd~~~ 404 (877)
...+.......+..+++++++..|+....+ .+|+.||+..
T Consensus 362 ~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 362 VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 444533455667888888888766555544 7899999865
No 204
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.38 E-value=4.2e-11 Score=126.00 Aligned_cols=218 Identities=10% Similarity=-0.032 Sum_probs=163.2
Q ss_pred CCCEEEEEECCCcEEEEeccCCeeeEEeccCC-CCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccC-CCC
Q psy13969 211 SDSKFATCSDDGTVRVWDFYRCTEEKVLRGHG-ADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAH-KST 288 (877)
Q Consensus 211 ~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~-~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h-~~~ 288 (877)
.+++|++++.|+.|.+||.++++.+..+..+. ..+.+++++|++++|+ +.++. |+.||. +++.+..+..+ ...
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~--V~~~d~-~G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKG--AKMITR-DGRELWNIAAPAGCE 78 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSE--EEEECT-TSCEEEEEECCTTCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCC--EEEECC-CCCEEEEEcCCCCcc
Confidence 46789999999999999999999999998766 5789999999999888 34565 999999 89989888765 357
Q ss_pred eeEEEEccCCCeEEEEeC-CCeEEEEEcCCCCcceEEEec------CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCC
Q psy13969 289 VMDLAWNQNGNWLVTASR-DHLLKVFDIRNLSSEVQTFRG------HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGA 361 (877)
Q Consensus 289 V~~l~~sp~g~~l~s~s~-Dg~I~iwd~~~~~~~~~~~~~------h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~ 361 (877)
+.++.+.+++++|++.+. ++.|..+|.. .+.+..+.. +......+++.+++. +|++.+.++.|.+||..
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~~--Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~~~~~v~~~d~~- 154 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNMK--GEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSEVREIAPN- 154 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECTT--SCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEETTTTEEEEECTT-
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeCC--CCEEEEEeccCCCCcccccccCceECCCCC-EEEEecCCCEEEEECCC-
Confidence 889999999999999887 7777777753 455544431 222455667888887 78888889999999998
Q ss_pred CceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcc-eeeeeeeeeeccCCCCeEEec
Q psy13969 362 DKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLA-HCITGVYNEEMELNDSAVIPG 440 (877)
Q Consensus 362 ~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~d~~~l~~~ 440 (877)
++.+..+.. ...+.++.+.+++++|++++.++.|..||..+...... +....+. .....+..+....++..+++.
T Consensus 155 G~~~w~~~~--~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~--~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 155 GQLLNSVKL--SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRR--VNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp SCEEEEEEC--SSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEE--EEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCEEEEEEC--CCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEE--ecCCCCCCccccccccceEcCCCCEEEEe
Confidence 888777632 24566788899999999998888999999875433222 1111111 112335666677788888876
Q ss_pred c
Q psy13969 441 M 441 (877)
Q Consensus 441 ~ 441 (877)
+
T Consensus 231 ~ 231 (276)
T 3no2_A 231 W 231 (276)
T ss_dssp E
T ss_pred c
Confidence 5
No 205
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.36 E-value=4.1e-10 Score=121.69 Aligned_cols=224 Identities=9% Similarity=-0.002 Sum_probs=151.0
Q ss_pred EEEEEEcCCCC-EEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEecc
Q psy13969 162 VRHMVWSHNGL-WMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRG 240 (877)
Q Consensus 162 V~~l~~spd~~-~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~ 240 (877)
...++|++++. ++++...++.|.+|+.++..+..+. +...|.+++|+++++++++. .+ .|.+||..+++.......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECS
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeC
Confidence 45678888644 5556667889999998877665553 35679999999998877654 44 599999877765433221
Q ss_pred ----CCCCeEEEEEcCCCCEEEEEecC----CcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEE-eCCCeEE
Q psy13969 241 ----HGADVKCVDWHPYKSLIVSGSKD----NQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTA-SRDHLLK 311 (877)
Q Consensus 241 ----h~~~v~~v~~sp~~~~l~sgs~d----g~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~-s~Dg~I~ 311 (877)
....+.+++++++++++++...+ ....|+.+| +++. ..+..+......++|++++++|+++ +.++.|.
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~ 204 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFADISIPNSICFSPDGTTGYFVDTKVNRLM 204 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCcccCCeEEcCCCCEEEEEECCCCEEE
Confidence 12358899999999977655432 122267777 4443 3333334457899999999877655 4578899
Q ss_pred EEEcC--CC-C----cceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEc-C
Q psy13969 312 VFDIR--NL-S----SEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWH-P 383 (877)
Q Consensus 312 iwd~~--~~-~----~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~s-p 383 (877)
+||+. +. . ..+..+......+..+++++++. ++++...++.|.+||. +++.+..+ ..+...+++++|+ +
T Consensus 205 ~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~-~g~~~~~i-~~~~~~~~~~af~g~ 281 (326)
T 2ghs_A 205 RVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDT-DGNHIARY-EVPGKQTTCPAFIGP 281 (326)
T ss_dssp EEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECT-TCCEEEEE-ECSCSBEEEEEEEST
T ss_pred EEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECC-CCCEEEEE-ECCCCCcEEEEEecC
Confidence 99986 32 1 11222222345577899999987 6666666788999998 55655555 3455679999998 8
Q ss_pred CCCEEEEEEcC
Q psy13969 384 LGHILATGSND 394 (877)
Q Consensus 384 ~g~~l~sg~~d 394 (877)
++..|++++..
T Consensus 282 d~~~L~vt~~~ 292 (326)
T 2ghs_A 282 DASRLLVTSAR 292 (326)
T ss_dssp TSCEEEEEEBC
T ss_pred CCCEEEEEecC
Confidence 87766555543
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.36 E-value=1.5e-11 Score=134.30 Aligned_cols=173 Identities=15% Similarity=0.064 Sum_probs=136.3
Q ss_pred CeeEEEEcCCCCEEEEEECCCcEEEEeccCCe-----------eeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEE
Q psy13969 202 SIRGISFSPSDSKFATCSDDGTVRVWDFYRCT-----------EEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKL 270 (877)
Q Consensus 202 ~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~-----------~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~i 270 (877)
.++.|++++...+|++++.+ .+++|++.+.. ..... .+.. |+.|+| ++++|+++ .++. |++
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~--l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNA--LYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSE--EEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCc--EEE
Confidence 68999999999999999988 56669875433 11222 3556 999999 88999988 7777 999
Q ss_pred EcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeC
Q psy13969 271 WDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGA 350 (877)
Q Consensus 271 wd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~ 350 (877)
||+++......+..|...|.++.+.+.. +++++.|+.|.+||+... .... +...|+|++|||++ ++.+..
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~-~~~~----~~~~Vs~v~WSpkG---~~vg~~ 180 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTK-STKQ----LAQNVTSFDVTNSQ---LAVLLK 180 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTC-CEEE----EEESEEEEEECSSE---EEEEET
T ss_pred EEchhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCC-cccc----ccCCceEEEEcCCc---eEEEEc
Confidence 9999877777777888889998887642 889999999999999863 2222 45689999999998 467889
Q ss_pred CCcEEEEEcCCCce--eEEec------C--cCCCCEEEEEEcCCCCEEEEEE
Q psy13969 351 DGSIMFWHVGADKE--VGCIP------Q--AHDNIIWTMAWHPLGHILATGS 392 (877)
Q Consensus 351 dg~I~iwd~~~~~~--~~~~~------~--~h~~~V~~v~~sp~g~~l~sg~ 392 (877)
|++|++|+...... ...+. . .|...|.+|+|.++..+|++-.
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 99999999877764 44441 1 3778899999999988887743
No 207
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.36 E-value=2.6e-10 Score=122.03 Aligned_cols=242 Identities=11% Similarity=0.061 Sum_probs=162.4
Q ss_pred ccCCCCeeEEEEcCCCCEEEE-------EECCCcEEEEeccCCeeeEEec----cCCCCeEEEEEcCC-CCEEEEEecCC
Q psy13969 197 QGHKESIRGISFSPSDSKFAT-------CSDDGTVRVWDFYRCTEEKVLR----GHGADVKCVDWHPY-KSLIVSGSKDN 264 (877)
Q Consensus 197 ~~h~~~V~~i~~sp~~~~l~s-------gs~Dg~I~iwd~~~~~~~~~l~----~h~~~v~~v~~sp~-~~~l~sgs~dg 264 (877)
...-....+++|+++++++++ ...++.|.+||..+++...... .+...+.+++++++ ++++++.. ..
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~ 92 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RL 92 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TT
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CC
Confidence 334445689999999988877 5778899999987766543322 24467899999999 66555444 44
Q ss_pred cccEEEEcCCCCceeEE-ecc----CCCCeeEEEEccCCCeEEEEeCC---------------CeEEEEEcCCCCcceEE
Q psy13969 265 QQPVKLWDPKAGQALAT-LHA----HKSTVMDLAWNQNGNWLVTASRD---------------HLLKVFDIRNLSSEVQT 324 (877)
Q Consensus 265 ~~~I~iwd~~~~~~~~~-~~~----h~~~V~~l~~sp~g~~l~s~s~D---------------g~I~iwd~~~~~~~~~~ 324 (877)
. |.+||.. ++.... ... ....+.+|+++++++++++...+ +.|..||.. .. +..
T Consensus 93 ~--l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--g~-~~~ 166 (314)
T 1pjx_A 93 G--LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD--GQ-MIQ 166 (314)
T ss_dssp E--EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT--SC-EEE
T ss_pred C--EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC--CC-EEE
Confidence 5 9999988 654332 211 12458899999999888777655 457777654 22 233
Q ss_pred EecCCCCeEEEEEc----CCCCcEEEEEeCCCcEEEEEcC-CCce-----eEEecCcCC-CCEEEEEEcCCCCEEEEEEc
Q psy13969 325 FRGHKKEASAVAWH----PQHEGLFSSGGADGSIMFWHVG-ADKE-----VGCIPQAHD-NIIWTMAWHPLGHILATGSN 393 (877)
Q Consensus 325 ~~~h~~~v~~i~~~----p~~~~~l~sgs~dg~I~iwd~~-~~~~-----~~~~~~~h~-~~V~~v~~sp~g~~l~sg~~ 393 (877)
+..+......++|+ +++..++++...++.|.+||+. .+.. ...+ ..+. ..+..++++++++++++...
T Consensus 167 ~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~-~~~~~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 167 VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHI-PGTHEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEEC-CCCSSCEEEEEEEBTTCCEEEEEET
T ss_pred eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEEC-CCCCCCCCCceEECCCCCEEEEEcC
Confidence 33344567889999 9887566776778899999986 3331 2222 2333 56889999999998888888
Q ss_pred CCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCCC
Q psy13969 394 DHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSS 453 (877)
Q Consensus 394 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~~ 453 (877)
++.|.+||..+.. .... . ......+.++++++++..|+.+...++.+..|+..
T Consensus 246 ~~~i~~~d~~~g~-~~~~-~-----~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 246 SSHIEVFGPDGGQ-PKMR-I-----RCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp TTEEEEECTTCBS-CSEE-E-----ECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCEEEEEcCCCCc-EeEE-E-----eCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 8999999976321 1111 1 11124567888888888666655556677777654
No 208
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.36 E-value=1.5e-10 Score=123.77 Aligned_cols=228 Identities=9% Similarity=0.045 Sum_probs=155.9
Q ss_pred CCEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEe
Q psy13969 160 CAVRHMVWSHNGL-WMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVL 238 (877)
Q Consensus 160 ~~V~~l~~spd~~-~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l 238 (877)
......+|+++++ ++++...++.|..|+.+ ..+..+..+...+..++|+++++++++...++.|.+||.. ++.....
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~ 122 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLV 122 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEE
Confidence 4466788989888 55677778999999985 4466666677889999999999876665556889999985 4432222
Q ss_pred cc----CCCCeEEEEEcCCCCEEEE----EecC-----------CcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCC
Q psy13969 239 RG----HGADVKCVDWHPYKSLIVS----GSKD-----------NQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGN 299 (877)
Q Consensus 239 ~~----h~~~v~~v~~sp~~~~l~s----gs~d-----------g~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~ 299 (877)
.. ....+.+++++++++++++ +..+ ....|+.||..+++..... .......++|+++++
T Consensus 123 ~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~ 200 (305)
T 3dr2_A 123 GRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQ 200 (305)
T ss_dssp CEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSS
T ss_pred eccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCC
Confidence 11 1234678999999998876 3211 1123888998777654433 445678899999999
Q ss_pred eEEEEeCC------CeEEEEEcCCCCc-ceEEE-ecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCc
Q psy13969 300 WLVTASRD------HLLKVFDIRNLSS-EVQTF-RGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQA 371 (877)
Q Consensus 300 ~l~s~s~D------g~I~iwd~~~~~~-~~~~~-~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~ 371 (877)
.|+++... ..|++||+..... ....+ .........+++++++. ++++. .+ .|.+|+. .++.+..+. .
T Consensus 201 ~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~-~~-gv~~~~~-~g~~~~~~~-~ 275 (305)
T 3dr2_A 201 TLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSS-GT-GVCVFDS-DGQLLGHIP-T 275 (305)
T ss_dssp EEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECC-SS-EEEEECT-TSCEEEEEE-C
T ss_pred EEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEec-CC-cEEEECC-CCCEEEEEE-C
Confidence 88887665 7899999875220 00111 11233456789999988 55443 44 4999998 455665552 2
Q ss_pred CCCCEEEEEEcCCCCEEEEEEcCCeE
Q psy13969 372 HDNIIWTMAWHPLGHILATGSNDHAS 397 (877)
Q Consensus 372 h~~~V~~v~~sp~g~~l~sg~~dg~v 397 (877)
+. .+.+++|+++++.|+.++.++.+
T Consensus 276 ~~-~~~~~~f~~d~~~L~it~~~~l~ 300 (305)
T 3dr2_A 276 PG-TASNCTFDQAQQRLFITGGPCLW 300 (305)
T ss_dssp SS-CCCEEEECTTSCEEEEEETTEEE
T ss_pred CC-ceeEEEEeCCCCEEEEEcCCeEE
Confidence 33 58899999998888888776433
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.35 E-value=8e-10 Score=121.51 Aligned_cols=232 Identities=11% Similarity=0.026 Sum_probs=159.2
Q ss_pred EEEEcCCCCEEEEEe----------CCCeEEEEeCCCcce-EEEccC-------CCCeeEEEEcCCCCEEEEEEC--CCc
Q psy13969 164 HMVWSHNGLWMVTSD----------HQGYIKYWQSNMNNV-KTFQGH-------KESIRGISFSPSDSKFATCSD--DGT 223 (877)
Q Consensus 164 ~l~~spd~~~l~sg~----------~dg~v~iwd~~~~~~-~~~~~h-------~~~V~~i~~sp~~~~l~sgs~--Dg~ 223 (877)
.++||||+++|+++. .++.|.+||..+..+ ..+... ...-..++|+||+++|++++. +.+
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999998875 367899999865433 333211 123458999999999998874 578
Q ss_pred EEEEeccCCeeeEE-eccCCCCeEEEEEcCCC-CEEEEEecCCcccEEEEcCCCCceeEEec-----cCCCC-eeEEEEc
Q psy13969 224 VRVWDFYRCTEEKV-LRGHGADVKCVDWHPYK-SLIVSGSKDNQQPVKLWDPKAGQALATLH-----AHKST-VMDLAWN 295 (877)
Q Consensus 224 I~iwd~~~~~~~~~-l~~h~~~v~~v~~sp~~-~~l~sgs~dg~~~I~iwd~~~~~~~~~~~-----~h~~~-V~~l~~s 295 (877)
|.++| .+++.+.. +.. .. |+.+.+++ ..+++.+.|+. +.+||. +++.+.... ..... .....|.
T Consensus 150 v~viD-~t~~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~--~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~ 221 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGG--LAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQA 221 (373)
T ss_pred EEEEE-CCCCEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCC--EEEEEC-CCcEEEEEeccccccCCcceeecceeE
Confidence 99999 99888776 542 22 24455554 46677788888 999999 777664322 11122 1234566
Q ss_pred cCCCeEEEEeCCCeEEEEEcCCCCc-ceEEEecC----------CCCeEEEEEcCCCCcEEEEEeC---------CCcEE
Q psy13969 296 QNGNWLVTASRDHLLKVFDIRNLSS-EVQTFRGH----------KKEASAVAWHPQHEGLFSSGGA---------DGSIM 355 (877)
Q Consensus 296 p~g~~l~s~s~Dg~I~iwd~~~~~~-~~~~~~~h----------~~~v~~i~~~p~~~~~l~sgs~---------dg~I~ 355 (877)
+++..++..+..+.|.++|+..... .+..+... ......+++++++..++++... .+.|.
T Consensus 222 ~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~ 301 (373)
T 2mad_H 222 NKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVT 301 (373)
T ss_pred ecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEE
Confidence 6666555555788999999865221 11222111 1223447889998866665532 35799
Q ss_pred EEEcCCCceeEEecCcCCCCEEEEEEcCCCC-EEEEEE-cCCeEEEEeCCCC
Q psy13969 356 FWHVGADKEVGCIPQAHDNIIWTMAWHPLGH-ILATGS-NDHASKFWTRNRL 405 (877)
Q Consensus 356 iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~-~l~sg~-~dg~v~iwd~~~~ 405 (877)
++|+.+.+.+..+... ....+++|++|++ +|+++. .++.|.+||+.+.
T Consensus 302 VID~~t~~vv~~i~~g--~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 302 SVTGLVGQTSSQISLG--HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAG 351 (373)
T ss_pred EEECCCCEEEEEEECC--CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 9999999998888433 3588999999998 788877 4899999998764
No 210
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.33 E-value=1.7e-11 Score=133.75 Aligned_cols=166 Identities=11% Similarity=0.061 Sum_probs=131.1
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcc-----------eEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEec
Q psy13969 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNN-----------VKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDF 229 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~-----------~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~ 229 (877)
.++.|++++...+|++++.++ +++|+++.-. ......+.. |+.|+| ++++|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 588899999999999999885 5559743211 112334666 999999 88999999 7899999999
Q ss_pred cCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCe
Q psy13969 230 YRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHL 309 (877)
Q Consensus 230 ~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~ 309 (877)
.+......+..|...|.++.+.+. .+++++.|+. |.+||+.+..... +...|+|++|||++ ++++..|++
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~--L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~ 183 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVND--LSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRS 183 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSE--EEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSC
T ss_pred hhhhccCccceeecceeeEEecCC--CEEEEECCCC--EEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCc
Confidence 887766667778888988887754 3888999998 9999999877543 45689999999999 788999999
Q ss_pred EEEEEcCCCCcc--eEEE------e---cCCCCeEEEEEcCCCC
Q psy13969 310 LKVFDIRNLSSE--VQTF------R---GHKKEASAVAWHPQHE 342 (877)
Q Consensus 310 I~iwd~~~~~~~--~~~~------~---~h~~~v~~i~~~p~~~ 342 (877)
|++|+.... .. ..++ . .|...|.+|+|.++..
T Consensus 184 i~~~~~~~~-~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~ 226 (388)
T 1xip_A 184 FQSFAWRNG-EMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD 226 (388)
T ss_dssp EEEEEEETT-EEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE
T ss_pred EEEEcCCCc-cccccceecCCcccccccCCCeeEEEEEEecCCe
Confidence 999988762 32 4445 2 3788999999999876
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.28 E-value=4.9e-10 Score=121.74 Aligned_cols=234 Identities=10% Similarity=0.049 Sum_probs=159.4
Q ss_pred EEEEcCCCCEEEEEe----------CCCeEEEEeCCCcce-EEEccC-------CCCeeEEEEcCCCCEEEEEEC--CCc
Q psy13969 164 HMVWSHNGLWMVTSD----------HQGYIKYWQSNMNNV-KTFQGH-------KESIRGISFSPSDSKFATCSD--DGT 223 (877)
Q Consensus 164 ~l~~spd~~~l~sg~----------~dg~v~iwd~~~~~~-~~~~~h-------~~~V~~i~~sp~~~~l~sgs~--Dg~ 223 (877)
.+++|||+++|++++ .++.|.+||..+..+ ..+.-. ...-..++|++|+++|+++.. ++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 399999999887665 367899999877654 333221 124567999999999998874 689
Q ss_pred EEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCC-CceeEEeccC----CCCee-EEEEc-c
Q psy13969 224 VRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKA-GQALATLHAH----KSTVM-DLAWN-Q 296 (877)
Q Consensus 224 I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~-~~~~~~~~~h----~~~V~-~l~~s-p 296 (877)
|.++|+.+.+.+..+.... ....+....+.+++.|.|+. +.++++.+ ++.+.....+ ...+. ...|. +
T Consensus 162 VsVID~~t~~vv~tI~v~g---~~~~~P~g~~~~~~~~~DG~--~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 236 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLDVPD---CYHIFPTAPDTFFMHCRDGS--LAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK 236 (386)
T ss_dssp EEEEETTTTEEEEEEECCS---EEEEEEEETTEEEEEETTSC--EEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETT
T ss_pred EEEEECCCCcEEEEEECCC---cceeecCCCceeEEECCCCC--EEEEECCCCCeEEEeecceeccccccccccceeEcC
Confidence 9999999999988885322 12233334467778888988 88889876 5543322111 12222 24564 5
Q ss_pred CCCeEEEEeCCCeEEEEEcCCCCc-ceEEEe----------cCCCCeEEEEEcCCCCcEEEEEeC---------CCcEEE
Q psy13969 297 NGNWLVTASRDHLLKVFDIRNLSS-EVQTFR----------GHKKEASAVAWHPQHEGLFSSGGA---------DGSIMF 356 (877)
Q Consensus 297 ~g~~l~s~s~Dg~I~iwd~~~~~~-~~~~~~----------~h~~~v~~i~~~p~~~~~l~sgs~---------dg~I~i 356 (877)
+++++ ..+.++.|+++|+..... .+..+. .....+..+++++++..++++-.. ...|.+
T Consensus 237 dG~~~-~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~v 315 (386)
T 3sjl_D 237 AGRLV-WPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV 315 (386)
T ss_dssp TTEEE-EEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred CCcEE-EEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEE
Confidence 66544 466689999999975221 111111 011233457788988877766432 257999
Q ss_pred EEcCCCceeEEecCcCCCCEEEEEEcCCCC-EEEEEE-cCCeEEEEeCCCC
Q psy13969 357 WHVGADKEVGCIPQAHDNIIWTMAWHPLGH-ILATGS-NDHASKFWTRNRL 405 (877)
Q Consensus 357 wd~~~~~~~~~~~~~h~~~V~~v~~sp~g~-~l~sg~-~dg~v~iwd~~~~ 405 (877)
+|+.+.+.+..+...+ .+++|+|++|++ +|+++. .++.|.++|..+.
T Consensus 316 iD~~t~kv~~~i~vg~--~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~ 364 (386)
T 3sjl_D 316 LDAKTGERLAKFEMGH--EIDSINVSQDEKPLLYALSTGDKTLYIHDAESG 364 (386)
T ss_dssp EETTTCCEEEEEEEEE--EECEEEECSSSSCEEEEEETTTTEEEEEETTTC
T ss_pred EECCCCeEEEEEECCC--CcceEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 9999999998885443 688999999996 777765 4899999998763
No 212
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.28 E-value=2.1e-10 Score=124.97 Aligned_cols=239 Identities=11% Similarity=0.068 Sum_probs=155.7
Q ss_pred CCEEEEEEcCCCCEEEEEe--CCCeEEEEeCCCcceEEE-------ccCCCCeeEEEEcCCCCEEEEEEC-----CCcEE
Q psy13969 160 CAVRHMVWSHNGLWMVTSD--HQGYIKYWQSNMNNVKTF-------QGHKESIRGISFSPSDSKFATCSD-----DGTVR 225 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~--~dg~v~iwd~~~~~~~~~-------~~h~~~V~~i~~sp~~~~l~sgs~-----Dg~I~ 225 (877)
..+..|+++++++++++.. .++.++||.++...+..+ ..|-..+.+|+++++++++++-+. +..|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 4577888888888877753 233244554433333322 234568999999999876555433 57899
Q ss_pred EEeccCCeeeEEeccC------CCCeEEEEEcCCCCEEEEE-e---cCCcccEEEEcCCCCceeEEeccCC---------
Q psy13969 226 VWDFYRCTEEKVLRGH------GADVKCVDWHPYKSLIVSG-S---KDNQQPVKLWDPKAGQALATLHAHK--------- 286 (877)
Q Consensus 226 iwd~~~~~~~~~l~~h------~~~v~~v~~sp~~~~l~sg-s---~dg~~~I~iwd~~~~~~~~~~~~h~--------- 286 (877)
+||+.+++.+..+... ...+..|++++++.+++++ + .++. |.+||+.+++....+..|.
T Consensus 97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~--i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAA--LIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCE--EEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCe--EEEEECCCCCEEEEecCCCcccccccce
Confidence 9999988876665432 2356899999865555444 3 4555 9999998887666554321
Q ss_pred --------------------CCeeEEEEccCCCeEEEEeCCC-eEEEEEcCCCC--c-----ce--EEEecCCCCeEEEE
Q psy13969 287 --------------------STVMDLAWNQNGNWLVTASRDH-LLKVFDIRNLS--S-----EV--QTFRGHKKEASAVA 336 (877)
Q Consensus 287 --------------------~~V~~l~~sp~g~~l~s~s~Dg-~I~iwd~~~~~--~-----~~--~~~~~h~~~v~~i~ 336 (877)
..+..|+|++++++|+++..++ .|..++..... . .. ....++......++
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia 254 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGIS 254 (343)
T ss_dssp EETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEE
T ss_pred eECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEE
Confidence 2357899999999888887766 45555532100 0 00 01123344566799
Q ss_pred EcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEe
Q psy13969 337 WHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWT 401 (877)
Q Consensus 337 ~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd 401 (877)
+++++. ++++...++.|.+||..+++........+...+++|+|.+++.++++.+..+.+.+|.
T Consensus 255 ~d~~G~-l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 255 IDKDHN-IYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp ECTTCC-EEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred ECCCCC-EEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccccccc
Confidence 999986 8888888899999998555433222222345689999999998888877655554444
No 213
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.27 E-value=5.2e-09 Score=115.01 Aligned_cols=267 Identities=10% Similarity=-0.054 Sum_probs=171.2
Q ss_pred cCCCCEEEEEeC--CC---eEEEEeCCCcce-EEEccCCCCeeEEEEcCCCCEEEEEE----------CCCcEEEEeccC
Q psy13969 168 SHNGLWMVTSDH--QG---YIKYWQSNMNNV-KTFQGHKESIRGISFSPSDSKFATCS----------DDGTVRVWDFYR 231 (877)
Q Consensus 168 spd~~~l~sg~~--dg---~v~iwd~~~~~~-~~~~~h~~~V~~i~~sp~~~~l~sgs----------~Dg~I~iwd~~~ 231 (877)
.++++++++.+. .. +|.+||..+..+ ..+.....+ .++||||+++|+++. .++.|.+||+.+
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 356666665543 22 789999776544 344433333 899999999999886 367899999988
Q ss_pred CeeeEEeccC-------CCCeEEEEEcCCCCEEEEEec--CCcccEEEEcCCCCceeEE-eccCCCCeeEEEEccCC-Ce
Q psy13969 232 CTEEKVLRGH-------GADVKCVDWHPYKSLIVSGSK--DNQQPVKLWDPKAGQALAT-LHAHKSTVMDLAWNQNG-NW 300 (877)
Q Consensus 232 ~~~~~~l~~h-------~~~v~~v~~sp~~~~l~sgs~--dg~~~I~iwd~~~~~~~~~-~~~h~~~V~~l~~sp~g-~~ 300 (877)
.+.+..+... ......++|+||+++|++++. +.. |.++| .+++.+.. +.. .. ++.+.+++ +.
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~--v~viD-~t~~~~~~~i~~-~~---~~~~~~~~~~~ 179 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA--VGLVV-QGGSSDDQLLSS-PT---CYHIHPGAPST 179 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe--EEEEE-CCCCEEeEEcCC-Cc---eEEEEeCCCce
Confidence 8777665432 123558999999999998875 355 99999 99988877 543 22 24445544 56
Q ss_pred EEEEeCCCeEEEEEcCCCCcceEEEe-----cCCCC-eEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCce--eEEecCc-
Q psy13969 301 LVTASRDHLLKVFDIRNLSSEVQTFR-----GHKKE-ASAVAWHPQHEGLFSSGGADGSIMFWHVGADKE--VGCIPQA- 371 (877)
Q Consensus 301 l~s~s~Dg~I~iwd~~~~~~~~~~~~-----~h~~~-v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~--~~~~~~~- 371 (877)
+++.+.|+.+.+||+ + ...+.... ..... .....+.+++..++++. .++.|.+.|+..... +..+...
T Consensus 180 ~~~~~~dg~~~~vd~-~-g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~~ 256 (373)
T 2mad_H 180 FYLLCAQGGLAKTDH-A-GGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKAPIDALS 256 (373)
T ss_pred EEEEcCCCCEEEEEC-C-CcEEEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEeeeeeecC
Confidence 677788999999999 5 33332211 11112 12345666665555544 678999999965431 2222100
Q ss_pred --------CCCCEEEEEEcCCCCEEEEEEc----------CCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCC
Q psy13969 372 --------HDNIIWTMAWHPLGHILATGSN----------DHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELN 433 (877)
Q Consensus 372 --------h~~~V~~v~~sp~g~~l~sg~~----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d 433 (877)
.......++++++++.|+++.. ++.|.++|+.+.... .. + ........+.|++|
T Consensus 257 ~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv-~~------i-~~g~~p~~i~~s~D 328 (373)
T 2mad_H 257 GGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTS-SQ------I-SLGHDVDAISVAQD 328 (373)
T ss_pred CcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEE-EE------E-ECCCCcCeEEECCC
Confidence 1122445789999887777653 357999998653221 11 1 11123678899999
Q ss_pred CC-eEEeccCCCCeeeecCCCC
Q psy13969 434 DS-AVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 434 ~~-~l~~~~g~d~~~~~~~~~~ 454 (877)
+. .++++...++.+.+++..+
T Consensus 329 g~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 329 GGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred CCeEEEEEcCCCCeEEEEECCC
Confidence 99 6666554678899988764
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.26 E-value=1.1e-09 Score=118.93 Aligned_cols=271 Identities=9% Similarity=-0.062 Sum_probs=178.3
Q ss_pred EcCCCCEEEEEeC-----CCeEEEEeCCCcce-EEEccCCCCeeEEEEcCCCCEEEEEE----------CCCcEEEEecc
Q psy13969 167 WSHNGLWMVTSDH-----QGYIKYWQSNMNNV-KTFQGHKESIRGISFSPSDSKFATCS----------DDGTVRVWDFY 230 (877)
Q Consensus 167 ~spd~~~l~sg~~-----dg~v~iwd~~~~~~-~~~~~h~~~V~~i~~sp~~~~l~sgs----------~Dg~I~iwd~~ 230 (877)
..|++++|+..+. ++.|.++|..+..+ ..+..-..+ . |+++||+++|++++ .++.|.+||+.
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 3467777776654 67999999877554 444433444 4 99999999888776 36789999999
Q ss_pred CCeeeEEeccC-------CCCeEEEEEcCCCCEEEEEec--CCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeE
Q psy13969 231 RCTEEKVLRGH-------GADVKCVDWHPYKSLIVSGSK--DNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWL 301 (877)
Q Consensus 231 ~~~~~~~l~~h-------~~~v~~v~~sp~~~~l~sgs~--dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l 301 (877)
+.+.+..+... ......++|+||+++|+++.. ++. |.++|+.+.+.+.++..-. . ...+....+.|
T Consensus 118 t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~--VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~ 192 (386)
T 3sjl_D 118 TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA--VGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTF 192 (386)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE--EEEEETTTTEEEEEEECCS--E-EEEEEEETTEE
T ss_pred CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe--EEEEECCCCcEEEEEECCC--c-ceeecCCCcee
Confidence 99888877532 124567999999999988875 456 9999999999998885421 1 23333355677
Q ss_pred EEEeCCCeEEEEEcCCCCcceEEEecCC----CCe-EEEEEc-CCCCcEEEEEeCCCcEEEEEcCCCc--eeEEec--C-
Q psy13969 302 VTASRDHLLKVFDIRNLSSEVQTFRGHK----KEA-SAVAWH-PQHEGLFSSGGADGSIMFWHVGADK--EVGCIP--Q- 370 (877)
Q Consensus 302 ~s~s~Dg~I~iwd~~~~~~~~~~~~~h~----~~v-~~i~~~-p~~~~~l~sgs~dg~I~iwd~~~~~--~~~~~~--~- 370 (877)
++.+.|+.+.++++......+.+...+. ..+ ....|. +++. +++ .+.++.|++.|+.... .+..+. .
T Consensus 193 ~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~-~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~ 270 (386)
T 3sjl_D 193 FMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGR-LVW-PTYTGKIHQIDLSSGDAKFLPAVEALTE 270 (386)
T ss_dssp EEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTE-EEE-EBTTSEEEEEECTTSSCEECCCEESSCH
T ss_pred EEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCc-EEE-EeCCCEEEEEECCCCcceeecceecccc
Confidence 7888899999999876333322221111 122 124564 5654 433 4568999999997654 222221 0
Q ss_pred ------cCCCCEEEEEEcCCCCEEEEEEc----------CCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCC
Q psy13969 371 ------AHDNIIWTMAWHPLGHILATGSN----------DHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELND 434 (877)
Q Consensus 371 ------~h~~~V~~v~~sp~g~~l~sg~~----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~ 434 (877)
.....+..++++++++.|++... ...|.++|+.+.... + ........+.+.+++|+
T Consensus 271 ~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~-~-------~i~vg~~~~~lavs~D~ 342 (386)
T 3sjl_D 271 AERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL-A-------KFEMGHEIDSINVSQDE 342 (386)
T ss_dssp HHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE-E-------EEEEEEEECEEEECSSS
T ss_pred ccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEE-E-------EEECCCCcceEEECCCC
Confidence 01122335778999988877653 246888888763221 1 11122457889999998
Q ss_pred C-eEEeccCCCCeeeecCCCC
Q psy13969 435 S-AVIPGMGLEDEDSVFPSSE 454 (877)
Q Consensus 435 ~-~l~~~~g~d~~~~~~~~~~ 454 (877)
. .|++....++.+.+++..+
T Consensus 343 ~~~ly~tn~~~~~VsViD~~t 363 (386)
T 3sjl_D 343 KPLLYALSTGDKTLYIHDAES 363 (386)
T ss_dssp SCEEEEEETTTTEEEEEETTT
T ss_pred CeEEEEEcCCCCeEEEEECCC
Confidence 6 6777666788888887754
No 215
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.22 E-value=1.8e-09 Score=120.48 Aligned_cols=240 Identities=12% Similarity=0.057 Sum_probs=159.7
Q ss_pred CCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeE
Q psy13969 201 ESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALA 280 (877)
Q Consensus 201 ~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~ 280 (877)
.....|+|+++++++++...++.|++||+.++.....+.. ..... ++|++++++|+++..++...|++||........
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 3578999999998777777779999999987766555544 33334 999999999998888662239999987665544
Q ss_pred Ee----ccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEE-----ecCCCCe--EEEEEcCCCCcEEEEEe
Q psy13969 281 TL----HAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTF-----RGHKKEA--SAVAWHPQHEGLFSSGG 349 (877)
Q Consensus 281 ~~----~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~-----~~h~~~v--~~i~~~p~~~~~l~sgs 349 (877)
.+ ..+...+.+++++++...|+++..++.|+.||..... +..+ ..+.... ..|+|+|++..++++-.
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~--~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE--VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC--EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC--EEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 44 2245678899999955556667778899999987632 2222 1122222 38999997666888877
Q ss_pred CCCcEEEEEcCCCceeEEecCcC---------------CCCEEEEEEcCCCCEEEEEE-cCCeEEEEeCCCCCCCccccc
Q psy13969 350 ADGSIMFWHVGADKEVGCIPQAH---------------DNIIWTMAWHPLGHILATGS-NDHASKFWTRNRLGDPMRDRY 413 (877)
Q Consensus 350 ~dg~I~iwd~~~~~~~~~~~~~h---------------~~~V~~v~~sp~g~~l~sg~-~dg~v~iwd~~~~~~~~~~~~ 413 (877)
.++.|+.|+.... +..+ ..+ -.....|+|+++++++++-. .++.|++|++... . +....
T Consensus 287 ~~~~I~~~~~~g~--~~~~-~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G-~-v~~~~ 361 (409)
T 3hrp_A 287 NLSSVYKITPDGE--CEWF-CGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG-Y-VSTVA 361 (409)
T ss_dssp TTTEEEEECTTCC--EEEE-EECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT-E-EEEEE
T ss_pred CCCEEEEEecCCC--EEEE-EeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC-E-EEEEe
Confidence 8889999997654 2222 111 23578999999999777777 7889999996432 1 11110
Q ss_pred cc---------CCcceeeeeeeeeeccCCCCeEEeccCCCCeeeec
Q psy13969 414 NQ---------KGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVF 450 (877)
Q Consensus 414 ~~---------~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~ 450 (877)
.. ............+++++++..+++.. ....|+.+
T Consensus 362 g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~-~n~~Ir~i 406 (409)
T 3hrp_A 362 GQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEA-WGKAIRKY 406 (409)
T ss_dssp ECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEES-TTCEEEEE
T ss_pred CCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEEC-CCCeEEEE
Confidence 00 00011133467788888866666654 44455443
No 216
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.22 E-value=2.9e-09 Score=113.32 Aligned_cols=230 Identities=10% Similarity=0.054 Sum_probs=151.0
Q ss_pred cCCCCeeEEEEcCCCC-EEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCC
Q psy13969 198 GHKESIRGISFSPSDS-KFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG 276 (877)
Q Consensus 198 ~h~~~V~~i~~sp~~~-~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~ 276 (877)
.+..-..+..|+++.. ++++...++.|+.||..+... ..+. +...+.+++++++++++++ . +.. |.+||..++
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~--l~~~d~~~g 83 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTK--FCALNWKEQ 83 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTE--EEEEETTTT
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCe--EEEEECCCC
Confidence 3444566899998655 455555678999999987654 3333 4567999999999995554 4 444 999999877
Q ss_pred ceeEEecc----CCCCeeEEEEccCCCeEEEEeCC---------CeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCc
Q psy13969 277 QALATLHA----HKSTVMDLAWNQNGNWLVTASRD---------HLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEG 343 (877)
Q Consensus 277 ~~~~~~~~----h~~~V~~l~~sp~g~~l~s~s~D---------g~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~ 343 (877)
+....... ....+++++++++++++++...+ ....||.+.... .+..+..+....+.++|++++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~pngi~~spdg~~ 162 (297)
T 3g4e_A 84 SAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDISNGLDWSLDHKI 162 (297)
T ss_dssp EEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESBEEEEEECTTSCE
T ss_pred cEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccccccceEEcCCCCE
Confidence 64332221 12458899999999977665332 234555554322 23333334456788999999987
Q ss_pred EEEEEeCCCcEEEEEcC--CCce-----eEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccC
Q psy13969 344 LFSSGGADGSIMFWHVG--ADKE-----VGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQK 416 (877)
Q Consensus 344 ~l~sgs~dg~I~iwd~~--~~~~-----~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~ 416 (877)
++++.+.++.|.+||+. ++.. +..+ ..+...+..+++++++++.++....+.|.+||..+. ..+..
T Consensus 163 lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~-~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG-~~~~~----- 235 (297)
T 3g4e_A 163 FYYIDSLSYSVDAFDYDLQTGQISNRRSVYKL-EKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG-KRLQT----- 235 (297)
T ss_dssp EEEEEGGGTEEEEEEECTTTCCEEEEEEEEEC-CGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC-CEEEE-----
T ss_pred EEEecCCCCcEEEEeccCCCCcccCcEEEEEC-CCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc-eEEEE-----
Confidence 77887788999999973 4432 1112 223456789999999998888888889999997642 22111
Q ss_pred Ccceeeeeeeeeecc-CCCCeEEeccC
Q psy13969 417 GLAHCITGVYNEEME-LNDSAVIPGMG 442 (877)
Q Consensus 417 ~~~~~~~~v~~~~~~-~d~~~l~~~~g 442 (877)
+......+.+++|. ++...|+.++.
T Consensus 236 -i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 236 -VKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp -EECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred -EECCCCCceEEEEeCCCCCEEEEEcC
Confidence 11112346778887 67666666553
No 217
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.20 E-value=1.1e-09 Score=121.17 Aligned_cols=234 Identities=12% Similarity=0.117 Sum_probs=162.3
Q ss_pred EEEEcCCCCEEEEEe----------CCCeEEEEeCCCcce-EEEccC-------CCCeeEEEEcCCCCEEEEEEC--CCc
Q psy13969 164 HMVWSHNGLWMVTSD----------HQGYIKYWQSNMNNV-KTFQGH-------KESIRGISFSPSDSKFATCSD--DGT 223 (877)
Q Consensus 164 ~l~~spd~~~l~sg~----------~dg~v~iwd~~~~~~-~~~~~h-------~~~V~~i~~sp~~~~l~sgs~--Dg~ 223 (877)
.++++||+++|+++. .++.|.++|..+..+ ..+.-. ...-..++|++|+++|+++.. +++
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 799999999888765 467899999877554 333211 133467899999999999874 578
Q ss_pred EEEEeccCCeeeEEeccCCCCeEEEEEcCCC-CEEEEEecCCcccEEEEcCCCCceeEEe----ccCCCCe-eEEEEccC
Q psy13969 224 VRVWDFYRCTEEKVLRGHGADVKCVDWHPYK-SLIVSGSKDNQQPVKLWDPKAGQALATL----HAHKSTV-MDLAWNQN 297 (877)
Q Consensus 224 I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~-~~l~sgs~dg~~~I~iwd~~~~~~~~~~----~~h~~~V-~~l~~sp~ 297 (877)
|.++|+.+.+.+..+..-. +....|++ ..+++.+.|+. +.+.++.+++..... ......+ ..+.|+++
T Consensus 202 VsVID~~t~kvv~~I~v~g----~~~~~p~g~~~~v~~~~dG~--~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~d 275 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPD----CYHIFPASPTVFYMNCRDGS--LARVDFADGETKVTNTEVFHTEDELLINHPAFSLR 275 (426)
T ss_dssp EEEEETTTTEEEEEEECCS----EEEEEEEETTEEEEEETTSS--EEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTT
T ss_pred EEEEECCCCeEEEEEEcCC----ceeeccCCCcEEEEEcCCCC--EEEEECCCCcEEEEeeeeeccCCCceeeEeeecCC
Confidence 9999999999888776422 12333433 56667777877 777787655544321 1111221 23567888
Q ss_pred CCeEEEEeCCCeEEEEEcCCCCcce-EEEec----------CCCCeEEEEEcCCCCcEEEEEeC---------CCcEEEE
Q psy13969 298 GNWLVTASRDHLLKVFDIRNLSSEV-QTFRG----------HKKEASAVAWHPQHEGLFSSGGA---------DGSIMFW 357 (877)
Q Consensus 298 g~~l~s~s~Dg~I~iwd~~~~~~~~-~~~~~----------h~~~v~~i~~~p~~~~~l~sgs~---------dg~I~iw 357 (877)
+..++..+..+.|.+.|+......+ ..+.. .......+++++++..++++... ++.|.++
T Consensus 276 g~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVI 355 (426)
T 3c75_H 276 SGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVL 355 (426)
T ss_dssp TCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred CCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEE
Confidence 8888888888999999986521111 11110 01112237899998877776542 3579999
Q ss_pred EcCCCceeEEecCcCCCCEEEEEEcCCCC-EEEEEE-cCCeEEEEeCCCC
Q psy13969 358 HVGADKEVGCIPQAHDNIIWTMAWHPLGH-ILATGS-NDHASKFWTRNRL 405 (877)
Q Consensus 358 d~~~~~~~~~~~~~h~~~V~~v~~sp~g~-~l~sg~-~dg~v~iwd~~~~ 405 (877)
|+.+.+.+..+... ...+.|+|++|++ +|+++. .++.|.++|+.+.
T Consensus 356 D~~T~kvv~~I~vg--~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 356 NAETGERINKIELG--HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp ETTTCCEEEEEEEE--EEECEEEECCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred ECCCCeEEEEEECC--CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCC
Confidence 99999999888433 2588999999998 888888 5999999999764
No 218
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.17 E-value=7.4e-10 Score=132.71 Aligned_cols=242 Identities=12% Similarity=0.083 Sum_probs=155.7
Q ss_pred CCCCeeEEEEcCCCCEEEEEEC-----CCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCc--------
Q psy13969 199 HKESIRGISFSPSDSKFATCSD-----DGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQ-------- 265 (877)
Q Consensus 199 h~~~V~~i~~sp~~~~l~sgs~-----Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~-------- 265 (877)
|...|..++||||+++||.+.. +.+|+|||+.+++.+.... +.....+++|+ |++.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 5667889999999998885442 3579999999987654311 11123578999 9998888877631
Q ss_pred ---ccEEEEcCCCCce--eEEe--cc-CCCCeeEEEEccCCCeEEEEeC----CCeEEEEEcCCCCcceEEEecCCCCeE
Q psy13969 266 ---QPVKLWDPKAGQA--LATL--HA-HKSTVMDLAWNQNGNWLVTASR----DHLLKVFDIRNLSSEVQTFRGHKKEAS 333 (877)
Q Consensus 266 ---~~I~iwd~~~~~~--~~~~--~~-h~~~V~~l~~sp~g~~l~s~s~----Dg~I~iwd~~~~~~~~~~~~~h~~~v~ 333 (877)
..|++|++.+... ...+ .. |...+.++.|++|+++|+..+. +..|++||+.........+..+...+.
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV 284 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE
Confidence 2399999887643 2233 33 4556789999999998866543 357999999875445666776766666
Q ss_pred EEEEcCCCCcEEEEEeCC---CcEEEEEcCCCce--eEEecCcCCCCEEEEEEcCCCCEEEEEEc-CC--eEEEEeCCCC
Q psy13969 334 AVAWHPQHEGLFSSGGAD---GSIMFWHVGADKE--VGCIPQAHDNIIWTMAWHPLGHILATGSN-DH--ASKFWTRNRL 405 (877)
Q Consensus 334 ~i~~~p~~~~~l~sgs~d---g~I~iwd~~~~~~--~~~~~~~h~~~V~~v~~sp~g~~l~sg~~-dg--~v~iwd~~~~ 405 (877)
.. |++++..++++...+ ..|.+||+.+... ...+ ..|...+. .|+++++.|+.... ++ .|++|++..
T Consensus 285 ~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l-~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g- 359 (693)
T 3iuj_A 285 SL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDL-IPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG- 359 (693)
T ss_dssp EE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEE-ECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS-
T ss_pred EE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEE-ecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC-
Confidence 65 667777677776654 5799999987654 2333 24444444 88888877766654 44 678888753
Q ss_pred CCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCC---CCeeeecCCC
Q psy13969 406 GDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGL---EDEDSVFPSS 453 (877)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~---d~~~~~~~~~ 453 (877)
...+.. . + .....+..+.+++++..++..+.. -..+..++..
T Consensus 360 -~~~~~l-~---~-p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 360 -KRVREV-A---L-PGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp -CEEEEE-C---C-SSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred -CeeEEe-e---c-CCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECC
Confidence 211111 0 1 111234455666666666554322 2466666654
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.14 E-value=1.8e-08 Score=108.67 Aligned_cols=220 Identities=9% Similarity=0.018 Sum_probs=144.5
Q ss_pred eeEEEEcCCCC-EEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEE
Q psy13969 203 IRGISFSPSDS-KFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALAT 281 (877)
Q Consensus 203 V~~i~~sp~~~-~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~ 281 (877)
..+++|++++. ++++...++.|.+||..+++.. .+. ....+.+++|+++++++++. .+ . |++||..+++....
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-g--l~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-G--LFLRDTATGVLTLH 124 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-E--EEEEETTTCCEEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-C--EEEEECCCCcEEEE
Confidence 46789999755 5555556789999999876543 333 34679999999998877654 33 3 99999988765433
Q ss_pred ecc----CCCCeeEEEEccCCCeEEEEeC------CCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCC
Q psy13969 282 LHA----HKSTVMDLAWNQNGNWLVTASR------DHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGAD 351 (877)
Q Consensus 282 ~~~----h~~~V~~l~~sp~g~~l~s~s~------Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~d 351 (877)
... ....+.+++++++++++++... .+.|..+| . .. +..+..+......++|+++++.++++.+.+
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~-g~-~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--K-GK-VTKLFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--T-TE-EEEEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--C-Cc-EEEeeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 221 1235889999999987766543 23455555 3 22 333333344678899999998676776677
Q ss_pred CcEEEEEcC--CC-ce-----eEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeee
Q psy13969 352 GSIMFWHVG--AD-KE-----VGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCIT 423 (877)
Q Consensus 352 g~I~iwd~~--~~-~~-----~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 423 (877)
+.|.+||+. ++ .. +..+ ......+..+++++++.++++...++.|.+|+.+ +..+.. + .....
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~-~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~--g~~~~~-i-----~~~~~ 271 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDS-TGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD--GNHIAR-Y-----EVPGK 271 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEEC-TTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT--CCEEEE-E-----ECSCS
T ss_pred CEEEEEEcccccCCcccCceEEEEC-CCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC--CCEEEE-E-----ECCCC
Confidence 899999986 44 21 1122 2234557889999999888877777899999873 222211 1 11122
Q ss_pred eeeeeecc-CCCCeEEecc
Q psy13969 424 GVYNEEME-LNDSAVIPGM 441 (877)
Q Consensus 424 ~v~~~~~~-~d~~~l~~~~ 441 (877)
.+.+++|. ++...|+++.
T Consensus 272 ~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 272 QTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp BEEEEEEESTTSCEEEEEE
T ss_pred CcEEEEEecCCCCEEEEEe
Confidence 46778887 6666665544
No 220
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.09 E-value=1.1e-08 Score=113.08 Aligned_cols=268 Identities=10% Similarity=-0.027 Sum_probs=175.6
Q ss_pred CCCEEEEEeC-C----CeEEEEeCCCcce-EEEccCCCCeeEEEEcCCCCEEEEEE----------CCCcEEEEeccCCe
Q psy13969 170 NGLWMVTSDH-Q----GYIKYWQSNMNNV-KTFQGHKESIRGISFSPSDSKFATCS----------DDGTVRVWDFYRCT 233 (877)
Q Consensus 170 d~~~l~sg~~-d----g~v~iwd~~~~~~-~~~~~h~~~V~~i~~sp~~~~l~sgs----------~Dg~I~iwd~~~~~ 233 (877)
+.+++++... + +.|.++|..+..+ ..+..-..+ .|+++||+++|+++. .++.|.++|..+.+
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 5565555443 2 6999999877554 344433444 899999999888876 36799999999998
Q ss_pred eeEEeccC-------CCCeEEEEEcCCCCEEEEEec--CCcccEEEEcCCCCceeEEeccCCCCeeEEEEccC-CCeEEE
Q psy13969 234 EEKVLRGH-------GADVKCVDWHPYKSLIVSGSK--DNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQN-GNWLVT 303 (877)
Q Consensus 234 ~~~~l~~h-------~~~v~~v~~sp~~~~l~sgs~--dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~-g~~l~s 303 (877)
.+..+..- ......++|++|+++|+++.. ++. |.++|+.+.+.+.++..-. +....|+ ...+++
T Consensus 161 vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~--VsVID~~t~kvv~~I~v~g----~~~~~p~g~~~~v~ 234 (426)
T 3c75_H 161 PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA--VGVVDLEGKTFDRMLDVPD----CYHIFPASPTVFYM 234 (426)
T ss_dssp EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE--EEEEETTTTEEEEEEECCS----EEEEEEEETTEEEE
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe--EEEEECCCCeEEEEEEcCC----ceeeccCCCcEEEE
Confidence 88776532 234567899999999998875 355 9999999999888876422 1233343 356677
Q ss_pred EeCCCeEEEEEcCCCCcceEE----EecCCCCe-EEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeE--EecCc-----
Q psy13969 304 ASRDHLLKVFDIRNLSSEVQT----FRGHKKEA-SAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVG--CIPQA----- 371 (877)
Q Consensus 304 ~s~Dg~I~iwd~~~~~~~~~~----~~~h~~~v-~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~--~~~~~----- 371 (877)
.+.|+.+.+.++.. .+.... +......+ ..+.|.+++..++++ +..+.|.+.|+....... .+...
T Consensus 235 ~~~dG~~~~V~~~~-~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~-s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i 312 (426)
T 3c75_H 235 NCRDGSLARVDFAD-GETKVTNTEVFHTEDELLINHPAFSLRSGRLVWP-TYTGKIFQADLTAEGATFRAPIEALTEAER 312 (426)
T ss_dssp EETTSSEEEEECCT-TCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEE-BTTSEEEEEEECSSCEEECCCEESSCTTTG
T ss_pred EcCCCCEEEEECCC-CcEEEEeeeeeccCCCceeeEeeecCCCCEEEEE-eCCCcEEEEeccCCceEEeeeeeecccccc
Confidence 77888888888843 333221 11111111 235678888765555 567899999986543221 11000
Q ss_pred ----CCCCEEEEEEcCCCCEEEEEEc----------CCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCC-e
Q psy13969 372 ----HDNIIWTMAWHPLGHILATGSN----------DHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDS-A 436 (877)
Q Consensus 372 ----h~~~V~~v~~sp~g~~l~sg~~----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~-~ 436 (877)
.......++|+++++.|++... ++.|.++|+.+.....+ + ........+.|++|+. .
T Consensus 313 ~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~-------I-~vg~~P~gia~spDg~~~ 384 (426)
T 3c75_H 313 ADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINK-------I-ELGHEIDSINVSQDAEPL 384 (426)
T ss_dssp GGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE-------E-EEEEEECEEEECCSSSCE
T ss_pred ccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEE-------E-ECCCCcCeEEEccCCCEE
Confidence 0011223789999887777653 35799999876432211 1 1223478889999998 7
Q ss_pred EEeccCCCCeeeecCCCCc
Q psy13969 437 VIPGMGLEDEDSVFPSSEP 455 (877)
Q Consensus 437 l~~~~g~d~~~~~~~~~~~ 455 (877)
+++....++.+.+++..+.
T Consensus 385 lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 385 LYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp EEEEETTTTEEEEEETTTC
T ss_pred EEEEcCCCCeEEEEECCCC
Confidence 7777667889999987654
No 221
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.02 E-value=2.2e-08 Score=109.40 Aligned_cols=223 Identities=9% Similarity=0.083 Sum_probs=151.9
Q ss_pred EEc--CCCCEEE-EEeCCCeEEEEeCCCc-----ceEEEc------c-CCCCeeEEEEcCCCCEEEEEECC------CcE
Q psy13969 166 VWS--HNGLWMV-TSDHQGYIKYWQSNMN-----NVKTFQ------G-HKESIRGISFSPSDSKFATCSDD------GTV 224 (877)
Q Consensus 166 ~~s--pd~~~l~-sg~~dg~v~iwd~~~~-----~~~~~~------~-h~~~V~~i~~sp~~~~l~sgs~D------g~I 224 (877)
.++ .+.++|+ ++..+..|+|+|+.+. .++++. . -...-..+..+|++ +++++..+ +.|
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 346 6777766 5677899999997643 233331 0 11133567788999 77776665 789
Q ss_pred EEEeccCCeeeEEeccCC---CCeEEEEEcCCCCEEEEEe-------------------cCCcccEEEEcCCCCceeEEe
Q psy13969 225 RVWDFYRCTEEKVLRGHG---ADVKCVDWHPYKSLIVSGS-------------------KDNQQPVKLWDPKAGQALATL 282 (877)
Q Consensus 225 ~iwd~~~~~~~~~l~~h~---~~v~~v~~sp~~~~l~sgs-------------------~dg~~~I~iwd~~~~~~~~~~ 282 (877)
.++|..+.+.+..+.... ..-+.+.|+|+++.+++.. ...+ |.+||+.+++.+.++
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~--V~v~D~~~~k~~~tI 244 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNR--IHFWDLRKRKRIHSL 244 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCE--EEEEETTTTEEEEEE
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCE--EEEEECCCCcEeeEE
Confidence 999999999888886322 2245688999999888875 2455 999999998888877
Q ss_pred ccCC--CCeeEEEE--ccCCCeEEEEe------CCCeEEEEEcCCCCcc--eEE--EecC----------------CCCe
Q psy13969 283 HAHK--STVMDLAW--NQNGNWLVTAS------RDHLLKVFDIRNLSSE--VQT--FRGH----------------KKEA 332 (877)
Q Consensus 283 ~~h~--~~V~~l~~--sp~g~~l~s~s------~Dg~I~iwd~~~~~~~--~~~--~~~h----------------~~~v 332 (877)
..-. .....|.| +|+++++++++ .+++|.+|.... ... +.. +... ....
T Consensus 245 ~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~p 323 (462)
T 2ece_A 245 TLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLV 323 (462)
T ss_dssp ESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCC
T ss_pred ecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEeCCCccccccccccccccccCCCce
Confidence 6521 23455656 99999888877 456787766543 110 111 1110 2356
Q ss_pred EEEEEcCCCCcEEEEEeCCCcEEEEEcCC---CceeEEecCc-------C---C---CCEEEEEEcCCCCEEEEEE
Q psy13969 333 SAVAWHPQHEGLFSSGGADGSIMFWHVGA---DKEVGCIPQA-------H---D---NIIWTMAWHPLGHILATGS 392 (877)
Q Consensus 333 ~~i~~~p~~~~~l~sgs~dg~I~iwd~~~---~~~~~~~~~~-------h---~---~~V~~v~~sp~g~~l~sg~ 392 (877)
..|.++++++.|+++.-..+.|.+||+.. .+.+..+... | . ..-..+++++|+++|+++.
T Consensus 324 a~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 324 TDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred eEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 78999999998888887789999999863 3445444332 1 0 1247899999999999988
No 222
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.01 E-value=3.3e-08 Score=105.49 Aligned_cols=232 Identities=13% Similarity=0.067 Sum_probs=147.5
Q ss_pred cceEEEccCCCCeeEEEEcCCCC-EEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEE
Q psy13969 191 NNVKTFQGHKESIRGISFSPSDS-KFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVK 269 (877)
Q Consensus 191 ~~~~~~~~h~~~V~~i~~sp~~~-~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~ 269 (877)
..+..+..........+|+++++ ++++...++.|..|+. +++ ...+..+...+..++|+++++++++...++. |.
T Consensus 35 ~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~--v~ 110 (305)
T 3dr2_A 35 ARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRA--IT 110 (305)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTE--EE
T ss_pred CceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCE--EE
Confidence 34555556666788999999998 5566666889999997 444 4455556778999999999997666555566 99
Q ss_pred EEcCCCCceeEEecc----CCCCeeEEEEccCCCeEEE----EeC-------------CCeEEEEEcCCCCcceEEEecC
Q psy13969 270 LWDPKAGQALATLHA----HKSTVMDLAWNQNGNWLVT----ASR-------------DHLLKVFDIRNLSSEVQTFRGH 328 (877)
Q Consensus 270 iwd~~~~~~~~~~~~----h~~~V~~l~~sp~g~~l~s----~s~-------------Dg~I~iwd~~~~~~~~~~~~~h 328 (877)
+||.. ++....... ....+.+++++++++++++ ++. .+.|..||..+. .. ..+. .
T Consensus 111 ~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g-~~-~~~~-~ 186 (305)
T 3dr2_A 111 RSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS-PL-QRMA-D 186 (305)
T ss_dssp EECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC-CC-EEEE-E
T ss_pred EECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC-cE-EEEe-c
Confidence 99986 543222211 1235778999999998876 332 245777776542 22 2222 4
Q ss_pred CCCeEEEEEcCCCCcEEEEEeC-----CCcEEEEEcCCCcee--EEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEe
Q psy13969 329 KKEASAVAWHPQHEGLFSSGGA-----DGSIMFWHVGADKEV--GCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWT 401 (877)
Q Consensus 329 ~~~v~~i~~~p~~~~~l~sgs~-----dg~I~iwd~~~~~~~--~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd 401 (877)
......++|++++..++++.+. ++.|++|++...... ..+..........+++++++++.++. .+ .|.+|+
T Consensus 187 ~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~ 264 (305)
T 3dr2_A 187 LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFD 264 (305)
T ss_dssp ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEEC
T ss_pred CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEEC
Confidence 4567889999999855555443 278999998754311 11111223345678999999955544 44 588898
Q ss_pred CCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEecc
Q psy13969 402 RNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGM 441 (877)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~ 441 (877)
.+ +..+.. +.. ...+.++.|.++...|+.++
T Consensus 265 ~~--g~~~~~-~~~------~~~~~~~~f~~d~~~L~it~ 295 (305)
T 3dr2_A 265 SD--GQLLGH-IPT------PGTASNCTFDQAQQRLFITG 295 (305)
T ss_dssp TT--SCEEEE-EEC------SSCCCEEEECTTSCEEEEEE
T ss_pred CC--CCEEEE-EEC------CCceeEEEEeCCCCEEEEEc
Confidence 74 222211 111 11356677777777666654
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.97 E-value=3.6e-08 Score=107.13 Aligned_cols=229 Identities=11% Similarity=0.028 Sum_probs=144.3
Q ss_pred CCeeEEEEcCCCCEEEEEEC--CCcEEEEeccCCeeeEEe-------ccCCCCeEEEEEcCCCCEEEEEec-----CCcc
Q psy13969 201 ESIRGISFSPSDSKFATCSD--DGTVRVWDFYRCTEEKVL-------RGHGADVKCVDWHPYKSLIVSGSK-----DNQQ 266 (877)
Q Consensus 201 ~~V~~i~~sp~~~~l~sgs~--Dg~I~iwd~~~~~~~~~l-------~~h~~~v~~v~~sp~~~~l~sgs~-----dg~~ 266 (877)
..+..|+++++++++++... ++.++||.+.+++. ..+ ..|...+.+|+++++++++++-+. +..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~- 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK- 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE-
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe-
Confidence 67899999999998888642 34355665544432 222 134567999999999876665443 355
Q ss_pred cEEEEcCCCCceeEEeccC------CCCeeEEEEccCCCeE-EEEe---CCCeEEEEEcCCCCcceEEEecCC-------
Q psy13969 267 PVKLWDPKAGQALATLHAH------KSTVMDLAWNQNGNWL-VTAS---RDHLLKVFDIRNLSSEVQTFRGHK------- 329 (877)
Q Consensus 267 ~I~iwd~~~~~~~~~~~~h------~~~V~~l~~sp~g~~l-~s~s---~Dg~I~iwd~~~~~~~~~~~~~h~------- 329 (877)
|.+||+.+++.+..+... ...+..|++++++.++ ++-+ .+..|.+||+.+ ....+.+..|.
T Consensus 95 -i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~-g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 95 -LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT-GLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp -EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT-CCEEEECTTCTTTSCCSC
T ss_pred -EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC-CCEEEEecCCCccccccc
Confidence 999999998877666432 2457899999865444 4444 578999999875 33334332221
Q ss_pred ----------------------CCeEEEEEcCCCCcEEEEEeCCCcEEEEEcC---CCc--------eeEEecCcCCCCE
Q psy13969 330 ----------------------KEASAVAWHPQHEGLFSSGGADGSIMFWHVG---ADK--------EVGCIPQAHDNII 376 (877)
Q Consensus 330 ----------------------~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~---~~~--------~~~~~~~~h~~~V 376 (877)
..+..|+|++++..++++......|+.++.. ... .+..+ .+....
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--g~~g~p 250 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY--SEKPIC 250 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE--EECCSC
T ss_pred ceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec--ccCCCC
Confidence 2357899999998555544444456555542 110 00111 223345
Q ss_pred EEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEecc
Q psy13969 377 WTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGM 441 (877)
Q Consensus 377 ~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~ 441 (877)
..+++++++.++++...++.|.+||... +. +..... . .......++++..++..+++..
T Consensus 251 dgia~d~~G~l~va~~~~~~V~~~d~~~-G~-~~~~~~---~-~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 251 DGISIDKDHNIYVGDLAHSAIGVITSAD-RA-YKLLVT---D-EKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp SCEEECTTCCEEEEEGGGTEEEEEETTT-TE-EEEEEE---C-GGGSCEEEEEECTTSCEEEEEC
T ss_pred ceEEECCCCCEEEEccCCCeEEEEECCC-CC-EEEEEE---C-CceecCCeeEECCCCcEEEEeC
Confidence 6799999999999988999999999722 11 111110 0 1133466778887777666654
No 224
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.95 E-value=2.7e-10 Score=125.28 Aligned_cols=203 Identities=11% Similarity=0.064 Sum_probs=111.3
Q ss_pred CCCEEEEEeCCCeEEEEeCCCcceE-EEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCCC-eE-
Q psy13969 170 NGLWMVTSDHQGYIKYWQSNMNNVK-TFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGAD-VK- 246 (877)
Q Consensus 170 d~~~l~sg~~dg~v~iwd~~~~~~~-~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~-v~- 246 (877)
++..|++++.|+.|+.||..+.++. .+.. ..+.+..+..++..+++++.|+.|+.||..+++.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 5678999999999999997765543 4443 55666666667778888889999999999888876665433211 11
Q ss_pred EEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEe
Q psy13969 247 CVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFR 326 (877)
Q Consensus 247 ~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~ 326 (877)
+.++. ++..|++++.++. |+.||.++++.+..+..+. .+.++|++..|++++.|+.|+.||.++. +.+..+.
T Consensus 86 sp~~~-~~~~v~~g~~dg~--v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG-~~~W~~~ 157 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDI--WYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTR-ELRWNAT 157 (369)
T ss_dssp CSCC------CCCCEEEEE--EEEECCC--------------------------EEEEEEEEEEECCCSSSS-SCCCEEE
T ss_pred CceEe-cCCEEEEEeCCCE--EEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCC-CEEEeEe
Confidence 11111 3456777888887 9999999999887776543 2345668888999999999999999874 4433332
Q ss_pred cCCCCeEEEEEcCCC--CcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEE-EEEEcCCCC
Q psy13969 327 GHKKEASAVAWHPQH--EGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIW-TMAWHPLGH 386 (877)
Q Consensus 327 ~h~~~v~~i~~~p~~--~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~-~v~~sp~g~ 386 (877)
.+. ....+++.+. ...+++++.|+.|+.||..+++.+-... ...++. ..+++.++.
T Consensus 158 ~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~--~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 158 YFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN--YASPVVAFYVWQREGL 216 (369)
T ss_dssp EEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE--CSSCEEEEEECTTSSC
T ss_pred ccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec--CCCceEEEEEecCCce
Confidence 211 1222333321 0245667889999999999998776652 334443 345555654
No 225
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.93 E-value=3.1e-08 Score=107.74 Aligned_cols=214 Identities=13% Similarity=-0.041 Sum_probs=137.2
Q ss_pred eEEEEeCCCcc-eEEEccCCCCeeEEEEcCCCCEEEEEE----------CCCcEEEEeccCCeeeEEeccC-------CC
Q psy13969 182 YIKYWQSNMNN-VKTFQGHKESIRGISFSPSDSKFATCS----------DDGTVRVWDFYRCTEEKVLRGH-------GA 243 (877)
Q Consensus 182 ~v~iwd~~~~~-~~~~~~h~~~V~~i~~sp~~~~l~sgs----------~Dg~I~iwd~~~~~~~~~l~~h-------~~ 243 (877)
+|.++|..+.+ +.++..-..+ .++++||+++|+++. .+++|.+||+.+.+.+..+... ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 78899987754 4455444445 799999999988887 3689999999999998888643 13
Q ss_pred CeEEEEEcCCCCEEEEEecC--CcccEEE--EcCCCCceeEEeccC------------------CCCeeEEEE-------
Q psy13969 244 DVKCVDWHPYKSLIVSGSKD--NQQPVKL--WDPKAGQALATLHAH------------------KSTVMDLAW------- 294 (877)
Q Consensus 244 ~v~~v~~sp~~~~l~sgs~d--g~~~I~i--wd~~~~~~~~~~~~h------------------~~~V~~l~~------- 294 (877)
....++|+||+++|+++... .. |.+ +|+.+ +.++..- ...+..+.+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~--v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~ 199 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAA--AGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAA 199 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCE--EEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCC
T ss_pred CcceEEEcCCCCEEEEEccCCCCe--EEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccC
Confidence 45689999999999988753 44 888 99876 2232110 000111111
Q ss_pred -------------------ccCCCeEEEEeCCCeEEEEEcCCCC-cceEEEecC----------CCCeEEEEEcCCCCcE
Q psy13969 295 -------------------NQNGNWLVTASRDHLLKVFDIRNLS-SEVQTFRGH----------KKEASAVAWHPQHEGL 344 (877)
Q Consensus 295 -------------------sp~g~~l~s~s~Dg~I~iwd~~~~~-~~~~~~~~h----------~~~v~~i~~~p~~~~~ 344 (877)
++++..++..+. +.|.+.|+.... ..+..+... ......++|++++..+
T Consensus 200 ~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~l 278 (368)
T 1mda_H 200 GIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGI 278 (368)
T ss_dssp EECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEE
T ss_pred CeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEE
Confidence 122223333333 556666664311 111111100 0111227899999877
Q ss_pred EEEEe-C-------CCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCC-EEEEEE-cCCeEEEEeCCCC
Q psy13969 345 FSSGG-A-------DGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGH-ILATGS-NDHASKFWTRNRL 405 (877)
Q Consensus 345 l~sgs-~-------dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~-~l~sg~-~dg~v~iwd~~~~ 405 (877)
+++.. . +..+.+||+.+.+.+..+.... ..+.|+|++|++ ++++.. .++.|.++|+.+.
T Consensus 279 yV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~--~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 279 MILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH--DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp EEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE--EECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred EEEeccccCcccccCCCEEEEECCCCeEEEEEECCC--CcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 76654 2 2356699999999888874332 588999999997 566666 5999999999763
No 226
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.91 E-value=1.2e-07 Score=101.99 Aligned_cols=218 Identities=15% Similarity=0.062 Sum_probs=152.6
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEE
Q psy13969 171 GLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDW 250 (877)
Q Consensus 171 ~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~ 250 (877)
+..|..++.++.|..+|.+...+..+..+...+.++...+++. |++++.++.|..||.. ++.+..+......+.++.+
T Consensus 107 ~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 184 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASI 184 (330)
T ss_dssp TTEEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEE
T ss_pred CCEEEEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEE
Confidence 4567778888999999987444445555566677777776665 5567778999999988 7776666656667778888
Q ss_pred cCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCC
Q psy13969 251 HPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKK 330 (877)
Q Consensus 251 sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~ 330 (877)
..++.+++. + +. |..|| .+++.+..+......+.++.+++++. |.+++.++.|..+|.. ...+..+.....
T Consensus 185 d~~g~l~v~-t--~~--l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~--g~~~~~~~~~~~ 255 (330)
T 3hxj_A 185 GKDGTIYFG-S--DK--VYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPD--GTEKWRFKTGKR 255 (330)
T ss_dssp CTTCCEEEE-S--SS--EEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTT--SCEEEEEECSSC
T ss_pred cCCCEEEEE-e--CE--EEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCC--CCEeEEeeCCCC
Confidence 777775544 4 55 99999 77777777766667788898888765 5666777888888753 344455554444
Q ss_pred CeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 331 EASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 331 ~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
.+.++.+..++. |+.++.++.|..+|. +++.+..+ ......+.++....++. |..++.+|.|++.....
T Consensus 256 ~~~~~~~~~~g~--l~v~t~~ggl~~~d~-~g~~~~~~-~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 256 IESSPVIGNTDT--IYFGSYDGHLYAINP-DGTEKWNF-ETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLE 324 (330)
T ss_dssp CCSCCEECTTSC--EEEECTTCEEEEECT-TSCEEEEE-ECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC--
T ss_pred ccccceEcCCCe--EEEecCCCCEEEECC-CCcEEEEE-EcCCccccceEEcCCCE-EEEEcCCCeEEEEeccc
Confidence 455566665554 556777888999996 55655554 23345567777777776 55688899999987653
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.91 E-value=7.3e-07 Score=97.39 Aligned_cols=231 Identities=13% Similarity=0.102 Sum_probs=149.7
Q ss_pred EEc--CCCCEEEE-EECCCcEEEEeccCC----eeeEEec-------cCCCCeEEEEEcCCCCEEEEEecC------Ccc
Q psy13969 207 SFS--PSDSKFAT-CSDDGTVRVWDFYRC----TEEKVLR-------GHGADVKCVDWHPYKSLIVSGSKD------NQQ 266 (877)
Q Consensus 207 ~~s--p~~~~l~s-gs~Dg~I~iwd~~~~----~~~~~l~-------~h~~~v~~v~~sp~~~~l~sgs~d------g~~ 266 (877)
.++ .+.++|++ +-.+.+|+|+|+.+. +...++. .-...-..+..+|++ +++++..+ +.
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~- 165 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGG- 165 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCE-
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCe-
Confidence 446 67776655 455789999999755 5555552 011234567788999 77666555 45
Q ss_pred cEEEEcCCCCceeEEeccCCC---CeeEEEEccCCCeEEEEe-------------------CCCeEEEEEcCCCCcceEE
Q psy13969 267 PVKLWDPKAGQALATLHAHKS---TVMDLAWNQNGNWLVTAS-------------------RDHLLKVFDIRNLSSEVQT 324 (877)
Q Consensus 267 ~I~iwd~~~~~~~~~~~~h~~---~V~~l~~sp~g~~l~s~s-------------------~Dg~I~iwd~~~~~~~~~~ 324 (877)
|.++|..+.+++.++..... .-+.+.|+|+.+.++++. .+.+|.+||+.+ .+.+.+
T Consensus 166 -v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~-~k~~~t 243 (462)
T 2ece_A 166 -ILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK-RKRIHS 243 (462)
T ss_dssp -EEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT-TEEEEE
T ss_pred -EEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC-CcEeeE
Confidence 99999999999998863322 245688999999888874 368899999987 466666
Q ss_pred EecCC--CCeEEEEE--cCCCCcEEEEEe-----CCCcEEEEEcCCCce--eEE--ecCc---------------CCCCE
Q psy13969 325 FRGHK--KEASAVAW--HPQHEGLFSSGG-----ADGSIMFWHVGADKE--VGC--IPQA---------------HDNII 376 (877)
Q Consensus 325 ~~~h~--~~v~~i~~--~p~~~~~l~sgs-----~dg~I~iwd~~~~~~--~~~--~~~~---------------h~~~V 376 (877)
+..-. .....|.| +|++...++++- .+++|.+|....+.. +.. +... .....
T Consensus 244 I~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~p 323 (462)
T 2ece_A 244 LTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLV 323 (462)
T ss_dssp EESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCC
T ss_pred EecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCce
Confidence 65421 23445555 999997777777 788888776654321 111 1100 02347
Q ss_pred EEEEEcCCCCEEEEEEc-CCeEEEEeCCCCCCC-cccccccCCc---------ceeeeeeeeeeccCCCCeEEecc
Q psy13969 377 WTMAWHPLGHILATGSN-DHASKFWTRNRLGDP-MRDRYNQKGL---------AHCITGVYNEEMELNDSAVIPGM 441 (877)
Q Consensus 377 ~~v~~sp~g~~l~sg~~-dg~v~iwd~~~~~~~-~~~~~~~~~~---------~~~~~~v~~~~~~~d~~~l~~~~ 441 (877)
..|.+|+|+++|+++.. .+.|.+||+...... +......... ......-..+.+++|+.+|+++.
T Consensus 324 a~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 324 TDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred eEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 78999999999988876 678999999643221 1111111100 00001236677889999888865
No 228
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.87 E-value=1.4e-06 Score=90.68 Aligned_cols=223 Identities=7% Similarity=-0.001 Sum_probs=140.3
Q ss_pred EEEEEeCCCeEEEEeCCCcceE------EEccCCCCeeEEEEcCCCCEEEEEE-CCCcEEEEeccCCeeeEEeccCCCCe
Q psy13969 173 WMVTSDHQGYIKYWQSNMNNVK------TFQGHKESIRGISFSPSDSKFATCS-DDGTVRVWDFYRCTEEKVLRGHGADV 245 (877)
Q Consensus 173 ~l~sg~~dg~v~iwd~~~~~~~------~~~~h~~~V~~i~~sp~~~~l~sgs-~Dg~I~iwd~~~~~~~~~l~~h~~~v 245 (877)
+|+.+.. +.|+.++++..... .+......+..++|++++..|+.+. .++.|.++|+........+.......
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 81 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP 81 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence 4444443 46788886654321 2222234567999998766666555 46799999987654433333333568
Q ss_pred EEEEEcCCCCEEEEEec-CCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeC---CCeEEEEEcCCCCcc
Q psy13969 246 KCVDWHPYKSLIVSGSK-DNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASR---DHLLKVFDIRNLSSE 321 (877)
Q Consensus 246 ~~v~~sp~~~~l~sgs~-dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~---Dg~I~iwd~~~~~~~ 321 (877)
..|++++++..|+.+.. .+. |.++|+........+.........|++++++.+|+++.. .+.|.++++... .
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~--I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~--~ 157 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDR--IEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT--N 157 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTE--EEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC--C
T ss_pred cEEEEEecCCeEEEEECCCCE--EEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC--C
Confidence 89999997766665554 445 999998654332222222356789999997666665554 367888887642 2
Q ss_pred eEEEe-cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEE-cCCeEEE
Q psy13969 322 VQTFR-GHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGS-NDHASKF 399 (877)
Q Consensus 322 ~~~~~-~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~-~dg~v~i 399 (877)
...+. ........|++++++..++++-...+.|.++|+........+ . .......+++. +..|+.+. ..+.|.+
T Consensus 158 ~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~-~-~~~~P~gi~~d--~~~lyva~~~~~~v~~ 233 (267)
T 1npe_A 158 RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVL-E-GLQYPFAVTSY--GKNLYYTDWKTNSVIA 233 (267)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEE-E-CCCSEEEEEEE--TTEEEEEETTTTEEEE
T ss_pred cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEe-c-CCCCceEEEEe--CCEEEEEECCCCeEEE
Confidence 22222 233467889999988778888777889999999764433333 2 22334567664 34455444 5678998
Q ss_pred EeCCC
Q psy13969 400 WTRNR 404 (877)
Q Consensus 400 wd~~~ 404 (877)
+|...
T Consensus 234 ~d~~~ 238 (267)
T 1npe_A 234 MDLAI 238 (267)
T ss_dssp EETTT
T ss_pred EeCCC
Confidence 98754
No 229
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.83 E-value=3.9e-07 Score=93.71 Aligned_cols=193 Identities=9% Similarity=0.087 Sum_probs=133.7
Q ss_pred EEEEEEcCCCCEEEEEeC--CCeEEEEeCCCcceEEEcc--CCCCeeEEEEcCCCCEEEEEE-CCCcEEEEeccCCeeeE
Q psy13969 162 VRHMVWSHNGLWMVTSDH--QGYIKYWQSNMNNVKTFQG--HKESIRGISFSPSDSKFATCS-DDGTVRVWDFYRCTEEK 236 (877)
Q Consensus 162 V~~l~~spd~~~l~sg~~--dg~v~iwd~~~~~~~~~~~--h~~~V~~i~~sp~~~~l~sgs-~Dg~I~iwd~~~~~~~~ 236 (877)
...|+|++|+.++++.+. ++.|.++|..+..+..... .......++++ +..|+.+. .++.|.++|..+.+.+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEE
Confidence 578889988654455443 6899999988766543321 11223345665 44555554 57899999999999888
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCC-----CCeeEEEEccCCCeEEEEeCCCeEE
Q psy13969 237 VLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHK-----STVMDLAWNQNGNWLVTASRDHLLK 311 (877)
Q Consensus 237 ~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~-----~~V~~l~~sp~g~~l~s~s~Dg~I~ 311 (877)
.+..-...-.. +++|++.|+++..++. |.++|..+.+.+..+.... ..++.+.|. ++..++....+..|.
T Consensus 101 ~i~~g~~~g~g--lt~Dg~~l~vs~gs~~--l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~ 175 (266)
T 2iwa_A 101 NFTHQMKDGWG--LATDGKILYGSDGTSI--LYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIA 175 (266)
T ss_dssp EEECCSSSCCE--EEECSSSEEEECSSSE--EEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred EEECCCCCeEE--EEECCCEEEEECCCCe--EEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEE
Confidence 87532122223 4456777776665565 9999999998888776422 246788888 676555555688999
Q ss_pred EEEcCCCCcceEEEecC-------------CCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCC
Q psy13969 312 VFDIRNLSSEVQTFRGH-------------KKEASAVAWHPQHEGLFSSGGADGSIMFWHVGAD 362 (877)
Q Consensus 312 iwd~~~~~~~~~~~~~h-------------~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~ 362 (877)
+.|..+ .+.+.++... ....+.|+|++++..+|+++....+|++.++...
T Consensus 176 vID~~t-g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 176 RISAKD-GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEETTT-CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEECCC-CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 999988 4556666532 1356899999999989999988899998887543
No 230
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.83 E-value=6.3e-10 Score=122.38 Aligned_cols=182 Identities=12% Similarity=0.037 Sum_probs=106.3
Q ss_pred CCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCC-e
Q psy13969 211 SDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKST-V 289 (877)
Q Consensus 211 ~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~-V 289 (877)
++.+|++++.|+.|+.||..+++.+..+.. ..+.+..+..++.++++++.|+. |+.||.++++.+..+..+... +
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~--l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGS--LYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCC--EEEC-----CCSEECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCE--EEEEECCCCceeeeeeccCcccc
Confidence 577899999999999999999999888875 45656556667778888889998 999999998887766443211 1
Q ss_pred e-EEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEe
Q psy13969 290 M-DLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCI 368 (877)
Q Consensus 290 ~-~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~ 368 (877)
. +..+. ++..|++++.|+.|+.||.++ .+.+..+..+. .+.++|++. ++++++.|+.|+.||..+++.+..+
T Consensus 84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~t-G~~~w~~~~~~----~~~~~p~~~-~v~~~~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQDIWYVIDLLT-GEKQQTLSSAF----ADSLSPSTS-LLYLGRTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCEE
T ss_pred ccCceEe-cCCEEEEEeCCCEEEEEECCC-CcEEEEecCCC----cccccccCC-EEEEEecCCEEEEEECCCCCEEEeE
Confidence 1 11111 345677888899999999987 44555544433 234556555 6777888999999999998866544
Q ss_pred cCcCCCCEEEEEEcCCC---CEEEEEEcCCeEEEEeCCCCC
Q psy13969 369 PQAHDNIIWTMAWHPLG---HILATGSNDHASKFWTRNRLG 406 (877)
Q Consensus 369 ~~~h~~~V~~v~~sp~g---~~l~sg~~dg~v~iwd~~~~~ 406 (877)
. .+ .....+++.+. ..|++++.|+.|+.||..+..
T Consensus 157 ~-~~--~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 157 T-YF--DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp E-EE--EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred e-cc--cccCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 2 11 11223334332 457778899999999997643
No 231
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.82 E-value=1.1e-06 Score=94.44 Aligned_cols=237 Identities=8% Similarity=0.029 Sum_probs=149.0
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEccC--------------------CCCeeEEEEcCCCCEEEEEECC
Q psy13969 162 VRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGH--------------------KESIRGISFSPSDSKFATCSDD 221 (877)
Q Consensus 162 V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h--------------------~~~V~~i~~sp~~~~l~sgs~D 221 (877)
..+++|.+++++|+++..++.|..|+.+...+..+... ...+..|++.++...|+++...
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~ 100 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY 100 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC
Confidence 45677888888777888889999999876555544311 1357889999734456666555
Q ss_pred CcEEEEeccCCeeeEEecc-----CCCCeEEEEEcC-CCCEEEEEecC---------------CcccEEEEcCCCCceeE
Q psy13969 222 GTVRVWDFYRCTEEKVLRG-----HGADVKCVDWHP-YKSLIVSGSKD---------------NQQPVKLWDPKAGQALA 280 (877)
Q Consensus 222 g~I~iwd~~~~~~~~~l~~-----h~~~v~~v~~sp-~~~~l~sgs~d---------------g~~~I~iwd~~~~~~~~ 280 (877)
..|.++|..++.. ..+.. .......+++.+ +++++++-... ..+.|..||..+++...
T Consensus 101 ~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 179 (322)
T 2fp8_A 101 YHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL 179 (322)
T ss_dssp TEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE
T ss_pred CCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE
Confidence 6688888765432 22211 123468899999 88876664321 11238899987665432
Q ss_pred EeccCCCCeeEEEEccCCCeEEEE-eCCCeEEEEEcCCCC-cceEEEecCCCCeEEEEEcCCCCcEEEEEeC--------
Q psy13969 281 TLHAHKSTVMDLAWNQNGNWLVTA-SRDHLLKVFDIRNLS-SEVQTFRGHKKEASAVAWHPQHEGLFSSGGA-------- 350 (877)
Q Consensus 281 ~~~~h~~~V~~l~~sp~g~~l~s~-s~Dg~I~iwd~~~~~-~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~-------- 350 (877)
... .......|+|++++++|+++ +..+.|.+||+.... .....+..... ...|++.+++. ++++...
T Consensus 180 ~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~-l~va~~~~~~~~~~~ 256 (322)
T 2fp8_A 180 LLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGH-FWVSSSEELDGNMHG 256 (322)
T ss_dssp EEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSC-EEEEEEEETTSSTTS
T ss_pred ecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCC-EEEEecCcccccccC
Confidence 222 22345679999999866655 556889999987421 11222221223 77899999987 6555543
Q ss_pred --CCcEEEEEcCCCceeEEecCcC---CCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 351 --DGSIMFWHVGADKEVGCIPQAH---DNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 351 --dg~I~iwd~~~~~~~~~~~~~h---~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
.+.|.++|.. ++.+..+.... ...++++++. +++++++....+.|.++++..
T Consensus 257 ~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 257 RVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEH-DGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp CEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEE-TTEEEEECSSCSEEEEEEC--
T ss_pred CCccEEEEECCC-CCEEEEEECCCCCccccceEEEEe-CCEEEEeecCCCceEEEeccc
Confidence 4568888864 55555553221 2346677774 566666666778899998754
No 232
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.82 E-value=1e-07 Score=102.46 Aligned_cols=222 Identities=13% Similarity=0.052 Sum_probs=144.1
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEecc
Q psy13969 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRG 240 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~ 240 (877)
.+.++.+..++.+++ ++.+ |..||.+...+..+..+...+....+. +..|.+++.++.|..||.. ++....+..
T Consensus 61 ~~~~~~~~~~g~l~v-~t~~--l~~~d~~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~ 134 (330)
T 3hxj_A 61 IECRPSIGKDGTIYF-GSDK--VYAINPDGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKT 134 (330)
T ss_dssp EEECCEETTTTEECC-SSCE--EEEECCCGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEEC
T ss_pred cccceEEecCCcEEE-ecCc--EEEECCCCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcC
Confidence 456677766665444 4434 888886544433333333333334444 5577788889999999987 666666665
Q ss_pred CCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCc
Q psy13969 241 HGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSS 320 (877)
Q Consensus 241 h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~ 320 (877)
+...+.++....++. |++++.++. |..||.. ++.+..+......+.++.+..++.+++ ++ +.|..|| .+ ..
T Consensus 135 ~~~~~~~~~~~~~g~-l~vgt~~~~--l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~-g~ 205 (330)
T 3hxj_A 135 KKAIYATPIVSEDGT-IYVGSNDNY--LYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PD-GT 205 (330)
T ss_dssp SSCCCSCCEECTTSC-EEEECTTSE--EEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TT-SC
T ss_pred CCceeeeeEEcCCCE-EEEEcCCCE--EEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CC-Cc
Confidence 556677777777766 555677777 9999998 777777766666788888877776544 44 7799999 44 34
Q ss_pred ceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEE
Q psy13969 321 EVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFW 400 (877)
Q Consensus 321 ~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iw 400 (877)
.+..+......+.++++.+++. |+.++.++.|..+|. +++.+..+. .....+.++.+..++ .|.+++.++.|..+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~g~--l~v~t~~~gl~~~~~-~g~~~~~~~-~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~ 280 (330)
T 3hxj_A 206 EKWNFYAGYWTVTRPAISEDGT--IYVTSLDGHLYAINP-DGTEKWRFK-TGKRIESSPVIGNTD-TIYFGSYDGHLYAI 280 (330)
T ss_dssp EEEEECCSSCCCSCCEECTTSC--EEEEETTTEEEEECT-TSCEEEEEE-CSSCCCSCCEECTTS-CEEEECTTCEEEEE
T ss_pred EEEEEccCCcceeceEECCCCe--EEEEcCCCeEEEECC-CCCEeEEee-CCCCccccceEcCCC-eEEEecCCCCEEEE
Confidence 4555555556788888888765 445667788888875 444444442 223334455666555 46667788889999
Q ss_pred eC
Q psy13969 401 TR 402 (877)
Q Consensus 401 d~ 402 (877)
|.
T Consensus 281 d~ 282 (330)
T 3hxj_A 281 NP 282 (330)
T ss_dssp CT
T ss_pred CC
Confidence 85
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.82 E-value=3.2e-06 Score=87.97 Aligned_cols=219 Identities=8% Similarity=0.017 Sum_probs=142.0
Q ss_pred CEEEEEEcCCCCEEE-EEeCCCeEEEEeCCCcceEEEc-cCCCCeeEEEEcCCCCEEEEEE-CCCcEEEEeccCCeeeEE
Q psy13969 161 AVRHMVWSHNGLWMV-TSDHQGYIKYWQSNMNNVKTFQ-GHKESIRGISFSPSDSKFATCS-DDGTVRVWDFYRCTEEKV 237 (877)
Q Consensus 161 ~V~~l~~spd~~~l~-sg~~dg~v~iwd~~~~~~~~~~-~h~~~V~~i~~sp~~~~l~sgs-~Dg~I~iwd~~~~~~~~~ 237 (877)
.+..++|++++..|+ +-...+.|.+++.+...+..+. ........|++++++..|+.+. .++.|.++++........
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 116 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL 116 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE
Confidence 467899998665555 4455789999998876554443 2235678999998766665554 467899999864332222
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEecC---CcccEEEEcCCCCceeEEe-ccCCCCeeEEEEccCCCeEEEE-eCCCeEEE
Q psy13969 238 LRGHGADVKCVDWHPYKSLIVSGSKD---NQQPVKLWDPKAGQALATL-HAHKSTVMDLAWNQNGNWLVTA-SRDHLLKV 312 (877)
Q Consensus 238 l~~h~~~v~~v~~sp~~~~l~sgs~d---g~~~I~iwd~~~~~~~~~~-~~h~~~V~~l~~sp~g~~l~s~-s~Dg~I~i 312 (877)
+.........+++++++..|+.+... +. |..+++.... ...+ .........|++++++.+|+++ ...+.|.+
T Consensus 117 ~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~--I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~ 193 (267)
T 1npe_A 117 FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPK--IETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAEC 193 (267)
T ss_dssp ECSSCSSEEEEEEETTTTEEEEEECCSSSCE--EEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EECCCCCccEEEEeeCCCEEEEEECCCCCcE--EEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEE
Confidence 32223567899999977666655543 34 8888875432 2222 2233467889999987666555 45678999
Q ss_pred EEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCC
Q psy13969 313 FDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGH 386 (877)
Q Consensus 313 wd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~ 386 (877)
+|+.. ......+. .......|+.. +..++++....+.|.++|..+++.+..+........+.|++.|++.
T Consensus 194 ~~~~g-~~~~~~~~-~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 194 LNPAQ-PGRRKVLE-GLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EETTE-EEEEEEEE-CCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred EecCC-CceEEEec-CCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 99875 22222222 22344566654 4557776666789999999999888887433223467788877753
No 234
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.80 E-value=7.9e-08 Score=108.69 Aligned_cols=220 Identities=12% Similarity=0.093 Sum_probs=153.0
Q ss_pred CCCEEEEEe-CCCeEEEEeCCCcceEE-Ec-cCCCCeeEEEE-c-CCCCEEEEEE------------------CCCcEEE
Q psy13969 170 NGLWMVTSD-HQGYIKYWQSNMNNVKT-FQ-GHKESIRGISF-S-PSDSKFATCS------------------DDGTVRV 226 (877)
Q Consensus 170 d~~~l~sg~-~dg~v~iwd~~~~~~~~-~~-~h~~~V~~i~~-s-p~~~~l~sgs------------------~Dg~I~i 226 (877)
|+++|+... .+..|.+.|+++.++.. +. ........+++ + |++.+|++++ .++.|.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 677776554 46679999988865433 22 22345788898 5 8999998885 2468999
Q ss_pred EeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCc------------------------------------ccEEE
Q psy13969 227 WDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQ------------------------------------QPVKL 270 (877)
Q Consensus 227 wd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~------------------------------------~~I~i 270 (877)
+|..+.+....+..-. ...-++++++++++++++.+.. ..|.+
T Consensus 180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 9999988887776422 4566789999999999886641 12777
Q ss_pred EcCCC--Cce-eEEeccCCCCeeEEEEccCCCeEEEEe-CCCeEEEEEcCCCCc----------ceEEEecCCCCeEEEE
Q psy13969 271 WDPKA--GQA-LATLHAHKSTVMDLAWNQNGNWLVTAS-RDHLLKVFDIRNLSS----------EVQTFRGHKKEASAVA 336 (877)
Q Consensus 271 wd~~~--~~~-~~~~~~h~~~V~~l~~sp~g~~l~s~s-~Dg~I~iwd~~~~~~----------~~~~~~~h~~~v~~i~ 336 (877)
.|.++ ++. +..+.. .....++.++||++++++++ .+.+|.++|+.+... .+.....-......++
T Consensus 259 ID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~a 337 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTA 337 (595)
T ss_dssp EECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEE
T ss_pred EeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEE
Confidence 77776 444 444433 34567899999999888776 578899999986311 1222122234678899
Q ss_pred EcCCCCcEEEEEeCCCcEEEEEcCC----------CceeEEecCcCCCCE-E----EEEEcCCCCEEEEEEc
Q psy13969 337 WHPQHEGLFSSGGADGSIMFWHVGA----------DKEVGCIPQAHDNII-W----TMAWHPLGHILATGSN 393 (877)
Q Consensus 337 ~~p~~~~~l~sgs~dg~I~iwd~~~----------~~~~~~~~~~h~~~V-~----~v~~sp~g~~l~sg~~ 393 (877)
|++++ .++++.-.|..|.+||+.. .+.+..+ ..|-.+- . .+.+++||++|+++..
T Consensus 338 F~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~ki-dV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 338 FDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKL-DVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp ECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEE-ECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred ECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEe-ecccccccceeccceEeCCCCCEEEEcCC
Confidence 99999 6888888999999999976 4455555 3343221 1 1245899999998874
No 235
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.78 E-value=1.9e-07 Score=105.55 Aligned_cols=228 Identities=12% Similarity=0.079 Sum_probs=154.9
Q ss_pred CCCEEEEEEC-CCcEEEEeccCCeeeEEecc-CCCCeEEEEE-c-CCCCEEEEEecCC----------------cccEEE
Q psy13969 211 SDSKFATCSD-DGTVRVWDFYRCTEEKVLRG-HGADVKCVDW-H-PYKSLIVSGSKDN----------------QQPVKL 270 (877)
Q Consensus 211 ~~~~l~sgs~-Dg~I~iwd~~~~~~~~~l~~-h~~~v~~v~~-s-p~~~~l~sgs~dg----------------~~~I~i 270 (877)
|+++|+++.. +..|.+.|+.+.++...+.. ....+..+++ + |++.++++++... ...|.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 7788777766 45799999999998886543 2356888888 4 8999998885221 123899
Q ss_pred EcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCC--------------------------------------eEEE
Q psy13969 271 WDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDH--------------------------------------LLKV 312 (877)
Q Consensus 271 wd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg--------------------------------------~I~i 312 (877)
+|..+.+.+.++..-. ...-++++++++++++++.+. .|.|
T Consensus 180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 9999998888876533 457788999999999998654 3566
Q ss_pred EEcCC--CCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCc------------eeEEecCcCCCCEEE
Q psy13969 313 FDIRN--LSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADK------------EVGCIPQAHDNIIWT 378 (877)
Q Consensus 313 wd~~~--~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~------------~~~~~~~~h~~~V~~ 378 (877)
.|.++ ....+..+.. .....++.++||+++++++.-.+.+|.++|+.+.+ .+..+ .-......
T Consensus 259 ID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v--~vG~gP~h 335 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP--ELGLGPLH 335 (595)
T ss_dssp EECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC--BCCSCEEE
T ss_pred EeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc--CCCCCcce
Confidence 66654 1111223322 23456799999999888888889999999998653 22233 33456889
Q ss_pred EEEcCCCCEEEEEEcCCeEEEEeCCCCC--------CCcccccccCCcceeeeeeeeeeccCCCCeEEeccC
Q psy13969 379 MAWHPLGHILATGSNDHASKFWTRNRLG--------DPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMG 442 (877)
Q Consensus 379 v~~sp~g~~l~sg~~dg~v~iwd~~~~~--------~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g 442 (877)
++|+++|...++.-.|+.|.+|++.... ...........-..|......+.+++|+.+|++...
T Consensus 336 ~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 336 TAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred EEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 9999999544556679999999986510 111111111111233344455678899999988653
No 236
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.77 E-value=3.1e-07 Score=109.34 Aligned_cols=233 Identities=12% Similarity=0.117 Sum_probs=148.5
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceE-EEcc--CCCCeeEEEEcC---CCCEEEEEE------CCCcEEEEeccCCeeeEEe
Q psy13969 171 GLWMVTSDHQGYIKYWQSNMNNVK-TFQG--HKESIRGISFSP---SDSKFATCS------DDGTVRVWDFYRCTEEKVL 238 (877)
Q Consensus 171 ~~~l~sg~~dg~v~iwd~~~~~~~-~~~~--h~~~V~~i~~sp---~~~~l~sgs------~Dg~I~iwd~~~~~~~~~l 238 (877)
+..|++++.|+.|+.+|..+.++. .+.. +......+..+| ++ .|++++ .++.|+.||..+++.+..+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 567888889999999998765543 3322 111111111112 34 444443 3689999999999988766
Q ss_pred ccCC-------------------------------CCeEEEEEcCCCCEEEEEecCCc-----------------ccEEE
Q psy13969 239 RGHG-------------------------------ADVKCVDWHPYKSLIVSGSKDNQ-----------------QPVKL 270 (877)
Q Consensus 239 ~~h~-------------------------------~~v~~v~~sp~~~~l~sgs~dg~-----------------~~I~i 270 (877)
.... ....+++++++..+|++++.++. ..|..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 4210 01125788888888888877641 12899
Q ss_pred EcCCCCceeEEecc--CC-------CCeeEEEEccCCC---eEEEEeCCCeEEEEEcCCCCcceEEEecCC-C-------
Q psy13969 271 WDPKAGQALATLHA--HK-------STVMDLAWNQNGN---WLVTASRDHLLKVFDIRNLSSEVQTFRGHK-K------- 330 (877)
Q Consensus 271 wd~~~~~~~~~~~~--h~-------~~V~~l~~sp~g~---~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~-~------- 330 (877)
||.++++.+..+.. |. ..+.......+++ .|++++.++.|+++|.++. +++....... .
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG-~~l~~~~~~~~~w~~~~~~ 358 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATG-ELLSAKGIVPQSWTKGMDM 358 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC-CEEEEEESSCCSSEEEEET
T ss_pred EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCC-CEeccccccccccccccCc
Confidence 99999999887754 22 1122222223554 7888999999999999874 4432211100 0
Q ss_pred -------------------------------CeEEEEEcCCCCcEEEEEeC-----------------------------
Q psy13969 331 -------------------------------EASAVAWHPQHEGLFSSGGA----------------------------- 350 (877)
Q Consensus 331 -------------------------------~v~~i~~~p~~~~~l~sgs~----------------------------- 350 (877)
.-..++|+|+.. +|++.+.
T Consensus 359 ~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 437 (689)
T 1yiq_A 359 KTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTG-LVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTG 437 (689)
T ss_dssp TTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTT-EEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEEC
T ss_pred cCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCC-EEEEeccccceeeeeccccccccccccccccCcccc
Confidence 011267888877 4444321
Q ss_pred ----------------CCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCC
Q psy13969 351 ----------------DGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDP 408 (877)
Q Consensus 351 ----------------dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~ 408 (877)
++.|+.||+.+++.+-.+. +...+....++..+.+|++++.|+.|++||.++....
T Consensus 438 ~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~--~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 438 MMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVP--YVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp CCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEE--ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccCcccccCCCCCCCcceeEEEEECCCCCeEeEcc--CCCCccCccceECCCEEEEECCCCcEEEEECCCCccc
Confidence 3779999999999877662 2233344455667789999999999999999875444
No 237
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.76 E-value=2.5e-07 Score=100.64 Aligned_cols=215 Identities=9% Similarity=-0.128 Sum_probs=133.7
Q ss_pred cEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEec----------CCcccEEEEcCCCCceeEEeccC-------
Q psy13969 223 TVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSK----------DNQQPVKLWDPKAGQALATLHAH------- 285 (877)
Q Consensus 223 ~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~----------dg~~~I~iwd~~~~~~~~~~~~h------- 285 (877)
+|.++|..+.+.+..+..-..+ .+.++||+++|+++.. ++. |.+||+.+.+.+.++...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~--VsviD~~T~~vv~~I~v~~~~~~~~ 122 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDY--VEVFDPVTFLPIADIELPDAPRFSV 122 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEE--EEEECTTTCCEEEEEEETTSCSCCB
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCE--EEEEECCCCCEEEEEECCCcccccc
Confidence 8899999999999888755555 7999999998888862 455 999999999999988643
Q ss_pred CCCeeEEEEccCCCeEEEEeC--CCeEEE--EEcCCCCcceEEEecCC------------------CCeEEEEE------
Q psy13969 286 KSTVMDLAWNQNGNWLVTASR--DHLLKV--FDIRNLSSEVQTFRGHK------------------KEASAVAW------ 337 (877)
Q Consensus 286 ~~~V~~l~~sp~g~~l~s~s~--Dg~I~i--wd~~~~~~~~~~~~~h~------------------~~v~~i~~------ 337 (877)
......++|+||+++|+++.. +..|.+ +|+.+ +..+..-. ..+..+.+
T Consensus 123 g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t----v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~ 198 (368)
T 1mda_H 123 GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD----DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAA 198 (368)
T ss_dssp SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE----EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCC
T ss_pred CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh----ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECcccccc
Confidence 134668999999999999875 467888 88865 22221100 00000100
Q ss_pred --------------------cCCCCcEEEEEeCCCcEEEEEcCCCc--eeEEecCc------CC---CCEEEEEEcCCCC
Q psy13969 338 --------------------HPQHEGLFSSGGADGSIMFWHVGADK--EVGCIPQA------HD---NIIWTMAWHPLGH 386 (877)
Q Consensus 338 --------------------~p~~~~~l~sgs~dg~I~iwd~~~~~--~~~~~~~~------h~---~~V~~v~~sp~g~ 386 (877)
++++..+++ .+. +.|.+.|+.... .+..+... +. .....++|+++++
T Consensus 199 ~~~v~~~~t~~i~vg~~P~~~~~~~~~~~-vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~ 276 (368)
T 1mda_H 199 AGIVGAQCTGAQNCSSQAAQANYPGMLVW-AVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTD 276 (368)
T ss_dssp CEECCCCSCTTSCBCSCCEEETTTTEEEE-CBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTT
T ss_pred CCeEEEEeeeeeeCCCCccccccCCEEEE-EcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCC
Confidence 112221122 222 555555654321 11111000 00 0111268999998
Q ss_pred EEEEEEc-C--------CeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccC-CCCeeeecCCCCc
Q psy13969 387 ILATGSN-D--------HASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMG-LEDEDSVFPSSEP 455 (877)
Q Consensus 387 ~l~sg~~-d--------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g-~d~~~~~~~~~~~ 455 (877)
.|+++.. + ..+.+||+.+.... ..+. .......+.|++|+..++.... .++.+.+++..+.
T Consensus 277 ~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv-------~~i~-vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 277 GIMILTVEHSRSCLAAAENTSSVTASVGQTS-------GPIS-NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp EEEEEEEECSSCTTSCEEEEEEEESSSCCEE-------ECCE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred EEEEEeccccCcccccCCCEEEEECCCCeEE-------EEEE-CCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 8877643 2 35679998764221 1121 2225788899999986666555 6889999987653
No 238
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.74 E-value=4.4e-07 Score=107.71 Aligned_cols=232 Identities=12% Similarity=0.096 Sum_probs=154.1
Q ss_pred CCCEEEEEeCCCeEEEEeCCCcce-EEEccC-C----CCeeE-EEEcCCCCEEEEEEC------CCcEEEEeccCCeeeE
Q psy13969 170 NGLWMVTSDHQGYIKYWQSNMNNV-KTFQGH-K----ESIRG-ISFSPSDSKFATCSD------DGTVRVWDFYRCTEEK 236 (877)
Q Consensus 170 d~~~l~sg~~dg~v~iwd~~~~~~-~~~~~h-~----~~V~~-i~~sp~~~~l~sgs~------Dg~I~iwd~~~~~~~~ 236 (877)
++..|++++.|+.|+.+|..+.++ -.+..+ . ..+.+ ..+ .+..|++++. ++.|+.||..+++.+.
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 356788888999999999866543 344433 1 11211 111 2345555553 6899999999999887
Q ss_pred EeccCCCC--------------------------------eEEEEEcCCCCEEEEEecCCc-----------------cc
Q psy13969 237 VLRGHGAD--------------------------------VKCVDWHPYKSLIVSGSKDNQ-----------------QP 267 (877)
Q Consensus 237 ~l~~h~~~--------------------------------v~~v~~sp~~~~l~sgs~dg~-----------------~~ 267 (877)
.+...... ...++++++..+|++++.++. ..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~s 284 (677)
T 1kb0_A 205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLAS 284 (677)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEE
Confidence 76532211 135788888888888776631 13
Q ss_pred EEEEcCCCCceeEEecc--CC-------CCeeEEEEccCC---CeEEEEeCCCeEEEEEcCCCCcceEEEecCC-C----
Q psy13969 268 VKLWDPKAGQALATLHA--HK-------STVMDLAWNQNG---NWLVTASRDHLLKVFDIRNLSSEVQTFRGHK-K---- 330 (877)
Q Consensus 268 I~iwd~~~~~~~~~~~~--h~-------~~V~~l~~sp~g---~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~-~---- 330 (877)
|..+|.++++.+..+.. |. .....+....++ ..|++++.++.|+++|.++ .+.+..+.... .
T Consensus 285 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~t-G~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 285 IVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTN-GKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEESSCCSSEEE
T ss_pred EEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCC-CCEeccccccccCcccc
Confidence 99999999998877654 21 122233333467 6889999999999999988 44444433211 0
Q ss_pred ------Ce------------------------EEEEEcCCCCcEEEEEeC------------------------------
Q psy13969 331 ------EA------------------------SAVAWHPQHEGLFSSGGA------------------------------ 350 (877)
Q Consensus 331 ------~v------------------------~~i~~~p~~~~~l~sgs~------------------------------ 350 (877)
.+ ..++++|+.. +|++...
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 442 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG-LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNT 442 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT-EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC-EEEEeChhcceeeeccccccccccccccccccccccc
Confidence 00 1467888877 4444322
Q ss_pred -------------CCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCC
Q psy13969 351 -------------DGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGD 407 (877)
Q Consensus 351 -------------dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~ 407 (877)
.+.|..||+.+++.+-.+ .+...++...++.++.+|++++.|+.|++||..+...
T Consensus 443 g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~--~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 443 AKFFNAEPPKSKPFGRLLAWDPVAQKAAWSV--EHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp CEEECSSCCCSCCEEEEEEEETTTTEEEEEE--EESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ccccccccCCCCCccEEEEEeCCCCcEEeec--CCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCce
Confidence 277999999999887766 2344455566667788899999999999999987543
No 239
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.73 E-value=2e-06 Score=88.46 Aligned_cols=194 Identities=11% Similarity=0.086 Sum_probs=134.6
Q ss_pred CeeEEEEcCCCCEEEEEEC--CCcEEEEeccCCeeeEEeccCC-CCeEEEEEcCCCCEEEEEec-CCcccEEEEcCCCCc
Q psy13969 202 SIRGISFSPSDSKFATCSD--DGTVRVWDFYRCTEEKVLRGHG-ADVKCVDWHPYKSLIVSGSK-DNQQPVKLWDPKAGQ 277 (877)
Q Consensus 202 ~V~~i~~sp~~~~l~sgs~--Dg~I~iwd~~~~~~~~~l~~h~-~~v~~v~~sp~~~~l~sgs~-dg~~~I~iwd~~~~~ 277 (877)
....|+|++++.++++.+. +++|.++|+.+++.+..+.... .....++++ +..|+.+.. ++. |.++|..+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~--v~viD~~t~~ 97 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNI--GFIYDRRTLS 97 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSE--EEEEETTTTE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCE--EEEEECCCCc
Confidence 3579999988644444332 5799999999999888765322 223355665 455655554 455 9999999999
Q ss_pred eeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCC-----CCeEEEEEcCCCCcEEEEEeCCC
Q psy13969 278 ALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHK-----KEASAVAWHPQHEGLFSSGGADG 352 (877)
Q Consensus 278 ~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~-----~~v~~i~~~p~~~~~l~sgs~dg 352 (877)
.+.++..-... .+.+++|+..|+++..++.|.++|..+. +.+..+..-. ..++.+.|. ++. ++++...++
T Consensus 98 v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~-~v~~~I~Vg~~~~p~~~~nele~~-dg~-lyvn~~~~~ 172 (266)
T 2iwa_A 98 NIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTF-KLIKKHNVKYNGHRVIRLNELEYI-NGE-VWANIWQTD 172 (266)
T ss_dssp EEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTC-CEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTSS
T ss_pred EEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCC-cEEEEEEECCCCcccccceeEEEE-CCE-EEEecCCCC
Confidence 98888543111 2334557888888878899999999873 4445544221 246788888 553 776666688
Q ss_pred cEEEEEcCCCceeEEecCc------------CCCCEEEEEEcCCCC-EEEEEEcCCeEEEEeCCC
Q psy13969 353 SIMFWHVGADKEVGCIPQA------------HDNIIWTMAWHPLGH-ILATGSNDHASKFWTRNR 404 (877)
Q Consensus 353 ~I~iwd~~~~~~~~~~~~~------------h~~~V~~v~~sp~g~-~l~sg~~dg~v~iwd~~~ 404 (877)
.|.+.|..+++.+..+... .....+.|+|+++++ +++++....+|.+.++..
T Consensus 173 ~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 173 CIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred eEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 9999999999988887432 113678999999986 455555778888888754
No 240
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.67 E-value=1.3e-05 Score=85.12 Aligned_cols=226 Identities=14% Similarity=0.073 Sum_probs=138.2
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCC--cEEEEeccCCeeeEEe
Q psy13969 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDG--TVRVWDFYRCTEEKVL 238 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg--~I~iwd~~~~~~~~~l 238 (877)
....++|+++++++++-..++.|..|+.+......+. ....+..|+++++++++++..... .|..+|..+++.....
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~ 111 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLL 111 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEE
Confidence 4567888888887777667899999998765443332 345688999999998666554332 4777777666554332
Q ss_pred cc-CCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCce-eEEec---------cCCCCeeEEEEccCCCeEEEE-eC
Q psy13969 239 RG-HGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQA-LATLH---------AHKSTVMDLAWNQNGNWLVTA-SR 306 (877)
Q Consensus 239 ~~-h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~-~~~~~---------~h~~~V~~l~~sp~g~~l~s~-s~ 306 (877)
.. .......++..+.+..+++-..++. |+++|..+++. +.... ..-.....| ++++.+|+++ +.
T Consensus 112 ~~~~~~~~~g~~~~~~~~~~v~d~~~g~--i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~ 187 (306)
T 2p4o_A 112 TLPDAIFLNGITPLSDTQYLTADSYRGA--IWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE 187 (306)
T ss_dssp ECTTCSCEEEEEESSSSEEEEEETTTTE--EEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT
T ss_pred eCCCccccCcccccCCCcEEEEECCCCe--EEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC
Confidence 21 2223345555555444444444666 99999876421 21111 111234445 7777665554 56
Q ss_pred CCeEEEEEcCCCCc--ceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeE--EecCcCCCCEEEEEEc
Q psy13969 307 DHLLKVFDIRNLSS--EVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVG--CIPQAHDNIIWTMAWH 382 (877)
Q Consensus 307 Dg~I~iwd~~~~~~--~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~--~~~~~h~~~V~~v~~s 382 (877)
.+.|.+||+..... ....+.. ......|++++++. ++++....+.|.+||.. ++... .+ .......++++|.
T Consensus 188 ~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~-l~va~~~~~~V~~~~~~-G~~~~~~~~-~~~~~~p~~~a~~ 263 (306)
T 2p4o_A 188 KMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGN-LYGATHIYNSVVRIAPD-RSTTIIAQA-EQGVIGSTAVAFG 263 (306)
T ss_dssp TTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCC-EEEECBTTCCEEEECTT-CCEEEEECG-GGTCTTEEEEEEC
T ss_pred CCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCC-EEEEeCCCCeEEEECCC-CCEEEEeec-ccccCCceEEEEe
Confidence 77899999864111 1122211 13456789999986 77766667899999975 44322 22 2223568999998
Q ss_pred ---CCCCEEEEEEcCC
Q psy13969 383 ---PLGHILATGSNDH 395 (877)
Q Consensus 383 ---p~g~~l~sg~~dg 395 (877)
+++..|++++..+
T Consensus 264 g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 264 QTEGDCTAIYVVTNGG 279 (306)
T ss_dssp CSTTTTTEEEEEECTT
T ss_pred cccCCCCEEEEECCCC
Confidence 7877777766543
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.67 E-value=1.7e-06 Score=87.82 Aligned_cols=180 Identities=13% Similarity=0.238 Sum_probs=122.1
Q ss_pred EEEEEEcCCCCEEEEEeCCC--eEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEE-CCCcEEEEeccCCeeeEEe
Q psy13969 162 VRHMVWSHNGLWMVTSDHQG--YIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCS-DDGTVRVWDFYRCTEEKVL 238 (877)
Q Consensus 162 V~~l~~spd~~~l~sg~~dg--~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs-~Dg~I~iwd~~~~~~~~~l 238 (877)
...|.|+ ++.++++.+.++ .|+++|+.+.++.....-...........++..|.... .++.+.+||..+.+.+..+
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti 123 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSF 123 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEE
Confidence 4678888 666666666655 89999988776544333334443332333455655555 4889999999999999888
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCC-----CCeeEEEEccCCCeEEEEeCCCeEEEE
Q psy13969 239 RGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHK-----STVMDLAWNQNGNWLVTASRDHLLKVF 313 (877)
Q Consensus 239 ~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~-----~~V~~l~~sp~g~~l~s~s~Dg~I~iw 313 (877)
.... .-..++ +++..|+.+..+.. |.++|..+.+.+.++.... ..++.+.|. +++.++..-.+..|.+.
T Consensus 124 ~~~~-eG~glt--~dg~~L~~SdGs~~--i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vI 197 (262)
T 3nol_A 124 NYDG-EGWGLT--HNDQYLIMSDGTPV--LRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRI 197 (262)
T ss_dssp ECSS-CCCCEE--ECSSCEEECCSSSE--EEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred ECCC-CceEEe--cCCCEEEEECCCCe--EEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEE
Confidence 7432 223444 45666666555555 9999999999888875522 335567776 67666666578899999
Q ss_pred EcCCCCcceEEEecC------------CCCeEEEEEcCCCCcEEEEEe
Q psy13969 314 DIRNLSSEVQTFRGH------------KKEASAVAWHPQHEGLFSSGG 349 (877)
Q Consensus 314 d~~~~~~~~~~~~~h------------~~~v~~i~~~p~~~~~l~sgs 349 (877)
|..+ .+.+.++... ....+.|||+|+...+|+||-
T Consensus 198 Dp~t-G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 198 DPET-GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp CTTT-CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ECCC-CcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 9988 4555555432 134588999999887888874
No 242
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.67 E-value=9.6e-07 Score=104.81 Aligned_cols=191 Identities=10% Similarity=0.075 Sum_probs=124.1
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceE-EEccCCC-----------CeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEe
Q psy13969 171 GLWMVTSDHQGYIKYWQSNMNNVK-TFQGHKE-----------SIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVL 238 (877)
Q Consensus 171 ~~~l~sg~~dg~v~iwd~~~~~~~-~~~~h~~-----------~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l 238 (877)
+..|++++.++.|+.+|..+.++. .+..... ....+++ ++..|++++.|+.|..+|..+++.+..+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 455666677888888887665433 3322211 1123334 3668888999999999999999998887
Q ss_pred ccC-C----CCeEE-EEEcCCCCEEEEEec------CCcccEEEEcCCCCceeEEeccCCC-------------------
Q psy13969 239 RGH-G----ADVKC-VDWHPYKSLIVSGSK------DNQQPVKLWDPKAGQALATLHAHKS------------------- 287 (877)
Q Consensus 239 ~~h-~----~~v~~-v~~sp~~~~l~sgs~------dg~~~I~iwd~~~~~~~~~~~~h~~------------------- 287 (877)
..+ . ..+.+ .... +..+++++. ++. |+.||.++++.+.++.....
T Consensus 155 ~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~~~~~~~g~--v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~ 230 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRVF--KGKVIIGNGGAEYGVRGY--ITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWD 230 (677)
T ss_dssp ETTTTCCSSCBCCSCCEEE--TTEEEECCBCTTTCCBCE--EEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSC
T ss_pred cCCcCcCcCcccccCcEEE--CCEEEEEecccccCCCCE--EEEEECCCCcEEEEeccCCCCcccccccccccccccccc
Confidence 654 1 12221 1111 345555543 566 99999999998877754221
Q ss_pred -------------CeeEEEEccCCCeEEEEeCCC-------------------eEEEEEcCCCCcceEEEec--CC----
Q psy13969 288 -------------TVMDLAWNQNGNWLVTASRDH-------------------LLKVFDIRNLSSEVQTFRG--HK---- 329 (877)
Q Consensus 288 -------------~V~~l~~sp~g~~l~s~s~Dg-------------------~I~iwd~~~~~~~~~~~~~--h~---- 329 (877)
....++++++..+|++++.++ +|..+|.++ .+.+-.+.. |.
T Consensus 231 ~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~T-G~~~W~~~~~~~d~wd~ 309 (677)
T 1kb0_A 231 PSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDT-GKYKWHYQETPGDNWDY 309 (677)
T ss_dssp GGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTT-CCEEEEEESSTTCCSCC
T ss_pred ccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCC-CCEEEEEecCCCccccc
Confidence 113578889888888887664 599999988 444444443 21
Q ss_pred ---CCeEEEEEcCCCC--cEEEEEeCCCcEEEEEcCCCceeEEe
Q psy13969 330 ---KEASAVAWHPQHE--GLFSSGGADGSIMFWHVGADKEVGCI 368 (877)
Q Consensus 330 ---~~v~~i~~~p~~~--~~l~sgs~dg~I~iwd~~~~~~~~~~ 368 (877)
.....+....++. .++++++.++.|+++|..+++.+..+
T Consensus 310 ~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~ 353 (677)
T 1kb0_A 310 TSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAK 353 (677)
T ss_dssp CCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred ccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccc
Confidence 1222233333552 47888999999999999999987665
No 243
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.65 E-value=1.2e-06 Score=104.12 Aligned_cols=193 Identities=10% Similarity=0.092 Sum_probs=120.5
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceE-EEccCCC----------Ce-eEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEe
Q psy13969 171 GLWMVTSDHQGYIKYWQSNMNNVK-TFQGHKE----------SI-RGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVL 238 (877)
Q Consensus 171 ~~~l~sg~~dg~v~iwd~~~~~~~-~~~~h~~----------~V-~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l 238 (877)
+..|++++.++.|+.+|..+.++. .+..+.. .+ ..+++ ++.+|++++.|+.|..||..+++.+..+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 556677777888999997655433 3332211 01 12233 3568888999999999999999988776
Q ss_pred ccC--CCCeEEEEEcC--CCCEEEEEe------cCCcccEEEEcCCCCceeEEeccC-----------------------
Q psy13969 239 RGH--GADVKCVDWHP--YKSLIVSGS------KDNQQPVKLWDPKAGQALATLHAH----------------------- 285 (877)
Q Consensus 239 ~~h--~~~v~~v~~sp--~~~~l~sgs------~dg~~~I~iwd~~~~~~~~~~~~h----------------------- 285 (877)
... ......+..+| .+..+++++ .++. |+.||.++++.+..+...
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~--v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 225 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGY--VTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD 225 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCE--EEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred cCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCE--EEEEECCCCcEEEEecccCCCcccccccccccccccccCCc
Confidence 542 11111111111 123444443 2566 999999999988776421
Q ss_pred --------CCCeeEEEEccCCCeEEEEeCCCe-------------------EEEEEcCCCCcceEEEec--CC-------
Q psy13969 286 --------KSTVMDLAWNQNGNWLVTASRDHL-------------------LKVFDIRNLSSEVQTFRG--HK------- 329 (877)
Q Consensus 286 --------~~~V~~l~~sp~g~~l~s~s~Dg~-------------------I~iwd~~~~~~~~~~~~~--h~------- 329 (877)
......++++++..+|++++.++. |..||.++ .+.+-.+.. |.
T Consensus 226 ~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~T-G~~~W~~~~~~~d~wd~~~~ 304 (689)
T 1yiq_A 226 AYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADT-GEYVWHYQTTPGDAWDYTAT 304 (689)
T ss_dssp THHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTT-CCEEEEEESSTTCCSCCCCC
T ss_pred eeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccC-CceeEeeecCCcccccccCC
Confidence 011135788888889999887763 99999998 455544443 22
Q ss_pred CCeEEEEEcCCCC--cEEEEEeCCCcEEEEEcCCCceeEEe
Q psy13969 330 KEASAVAWHPQHE--GLFSSGGADGSIMFWHVGADKEVGCI 368 (877)
Q Consensus 330 ~~v~~i~~~p~~~--~~l~sgs~dg~I~iwd~~~~~~~~~~ 368 (877)
..+.......++. .+++.++.++.|+++|..+++.+...
T Consensus 305 ~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~ 345 (689)
T 1yiq_A 305 QHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAK 345 (689)
T ss_dssp SCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred CCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccc
Confidence 1122222222332 36788899999999999999887443
No 244
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.63 E-value=4.3e-06 Score=84.85 Aligned_cols=184 Identities=16% Similarity=0.217 Sum_probs=127.7
Q ss_pred cCCC--CeeEEEEcCCCCEEEEEECCC--cEEEEeccCCeeeEEeccCCCCeEE--EEEcCCCCEEEEEec-CCcccEEE
Q psy13969 198 GHKE--SIRGISFSPSDSKFATCSDDG--TVRVWDFYRCTEEKVLRGHGADVKC--VDWHPYKSLIVSGSK-DNQQPVKL 270 (877)
Q Consensus 198 ~h~~--~V~~i~~sp~~~~l~sgs~Dg--~I~iwd~~~~~~~~~l~~h~~~v~~--v~~sp~~~~l~sgs~-dg~~~I~i 270 (877)
.|.. ....|.|+ ++.++.+.+.++ .|+++|+.+++.+..+.... .... +++ ++..|+.... ++. +.+
T Consensus 38 phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~--~g~~ly~ltw~~~~--v~v 111 (262)
T 3nol_A 38 PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISD--WKDKIVGLTWKNGL--GFV 111 (262)
T ss_dssp ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEE--ETTEEEEEESSSSE--EEE
T ss_pred cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEE--eCCEEEEEEeeCCE--EEE
Confidence 4543 34789998 666667776665 99999999999888876433 3333 444 3555655554 555 999
Q ss_pred EcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecC--C---CCeEEEEEcCCCCcEE
Q psy13969 271 WDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGH--K---KEASAVAWHPQHEGLF 345 (877)
Q Consensus 271 wd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h--~---~~v~~i~~~p~~~~~l 345 (877)
||..+.+.+.++..... =..++ +++..|+.+..+..|.++|..+. +.+..+... . ..++.+.|. ++. ++
T Consensus 112 ~D~~t~~~~~ti~~~~e-G~glt--~dg~~L~~SdGs~~i~~iDp~T~-~v~~~I~V~~~g~~~~~lNELe~~-~G~-ly 185 (262)
T 3nol_A 112 WNIRNLRQVRSFNYDGE-GWGLT--HNDQYLIMSDGTPVLRFLDPESL-TPVRTITVTAHGEELPELNELEWV-DGE-IF 185 (262)
T ss_dssp EETTTCCEEEEEECSSC-CCCEE--ECSSCEEECCSSSEEEEECTTTC-SEEEEEECEETTEECCCEEEEEEE-TTE-EE
T ss_pred EECccCcEEEEEECCCC-ceEEe--cCCCEEEEECCCCeEEEEcCCCC-eEEEEEEeccCCccccccceeEEE-CCE-EE
Confidence 99999999998865322 23333 56777877777888999999873 445554432 1 345567876 554 77
Q ss_pred EEEeCCCcEEEEEcCCCceeEEecCc-----------CCCCEEEEEEcCCCCEEEEEEc
Q psy13969 346 SSGGADGSIMFWHVGADKEVGCIPQA-----------HDNIIWTMAWHPLGHILATGSN 393 (877)
Q Consensus 346 ~sgs~dg~I~iwd~~~~~~~~~~~~~-----------h~~~V~~v~~sp~g~~l~sg~~ 393 (877)
+..-.+..|.+.|..+++.+..+... .....+.|||+|+.+.|++.+.
T Consensus 186 an~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 186 ANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 66667889999999999988777321 1246789999999877777664
No 245
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.62 E-value=7e-06 Score=90.01 Aligned_cols=222 Identities=9% Similarity=0.018 Sum_probs=141.0
Q ss_pred CCCEEEEEeCCCeEEEEeCCCcceE-EEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCe---
Q psy13969 170 NGLWMVTSDHQGYIKYWQSNMNNVK-TFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADV--- 245 (877)
Q Consensus 170 d~~~l~sg~~dg~v~iwd~~~~~~~-~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v--- 245 (877)
++..|++++.++.|+.+|..+..+. .+............. +..|++++.++.|..+|..+++.+..+.......
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~ 179 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLR 179 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----C
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeec
Confidence 4567777888999999998765543 333332222222332 4578888899999999999998877765432211
Q ss_pred --EEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCC-------eeEEEEcc--CCCeEEEEeCCCeEEEEE
Q psy13969 246 --KCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKST-------VMDLAWNQ--NGNWLVTASRDHLLKVFD 314 (877)
Q Consensus 246 --~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~-------V~~l~~sp--~g~~l~s~s~Dg~I~iwd 314 (877)
.+.... +..+++++.++. |..+|..+++.+..+...... +..+..+| .+..+++++.++.|..+|
T Consensus 180 ~~~~~~~~--~~~v~~g~~~g~--l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d 255 (376)
T 3q7m_A 180 GESAPTTA--FGAAVVGGDNGR--VSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALD 255 (376)
T ss_dssp CCCCCEEE--TTEEEECCTTTE--EEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEE
T ss_pred CCCCcEEE--CCEEEEEcCCCE--EEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEE
Confidence 122222 456777888887 999999999887766432110 00011111 346788888899999999
Q ss_pred cCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcC
Q psy13969 315 IRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSND 394 (877)
Q Consensus 315 ~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~d 394 (877)
.++. +.+.... ......+... +. .++.++.++.|..+|..+++.+-.........+.+..+. +..|++++.+
T Consensus 256 ~~tG-~~~w~~~--~~~~~~~~~~--~~-~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~v~~~~ 327 (376)
T 3q7m_A 256 LRSG-QIMWKRE--LGSVNDFIVD--GN-RIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NGNLVVGDSE 327 (376)
T ss_dssp TTTC-CEEEEEC--CCCEEEEEEE--TT-EEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TTEEEEECTT
T ss_pred CCCC-cEEeecc--CCCCCCceEE--CC-EEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE--CCEEEEEeCC
Confidence 9873 4333333 2234444443 33 566677899999999999987766532222223333332 4678889999
Q ss_pred CeEEEEeCCCC
Q psy13969 395 HASKFWTRNRL 405 (877)
Q Consensus 395 g~v~iwd~~~~ 405 (877)
+.|++||..+.
T Consensus 328 g~l~~~d~~tG 338 (376)
T 3q7m_A 328 GYLHWINVEDG 338 (376)
T ss_dssp SEEEEEETTTC
T ss_pred CeEEEEECCCC
Confidence 99999998764
No 246
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.62 E-value=3.1e-06 Score=101.89 Aligned_cols=238 Identities=11% Similarity=0.037 Sum_probs=136.1
Q ss_pred CEEEEEEc-CCCCEEEEEeC-CC----eEEEEeCCCc-ceE--EEccCCCCeeEEEEcCCCCEEEEEECC-----CcEEE
Q psy13969 161 AVRHMVWS-HNGLWMVTSDH-QG----YIKYWQSNMN-NVK--TFQGHKESIRGISFSPSDSKFATCSDD-----GTVRV 226 (877)
Q Consensus 161 ~V~~l~~s-pd~~~l~sg~~-dg----~v~iwd~~~~-~~~--~~~~h~~~V~~i~~sp~~~~l~sgs~D-----g~I~i 226 (877)
.+..++|| ||+++||.... +| +|+++|+++. ... .+. .....++|++|++.|+..+.| ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 68889999 99998885433 32 5999998876 421 111 123578999999988887765 36888
Q ss_pred EeccCCee--eEEec-cCCCCeEEEEEcCCCCEEEEEecCC-cccEEEEcCCCCc-ee--EEec-cCCCCeeEEEEccCC
Q psy13969 227 WDFYRCTE--EKVLR-GHGADVKCVDWHPYKSLIVSGSKDN-QQPVKLWDPKAGQ-AL--ATLH-AHKSTVMDLAWNQNG 298 (877)
Q Consensus 227 wd~~~~~~--~~~l~-~h~~~v~~v~~sp~~~~l~sgs~dg-~~~I~iwd~~~~~-~~--~~~~-~h~~~V~~l~~sp~g 298 (877)
+++.+... ...+. .......++.|++|+++|+..+.+. ...|+++|+.+.. .. ..+. .......++.|+..+
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS 331 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC
Confidence 88876542 23332 2334467889999999887665332 2348889998752 22 3343 334556666665444
Q ss_pred CeEEEEeCC----CeEEEEEcCCCCcceEE-EecCCCC--eEEEEEcCCCCcEEEEEeCCCc--EEEEEc-------CCC
Q psy13969 299 NWLVTASRD----HLLKVFDIRNLSSEVQT-FRGHKKE--ASAVAWHPQHEGLFSSGGADGS--IMFWHV-------GAD 362 (877)
Q Consensus 299 ~~l~s~s~D----g~I~iwd~~~~~~~~~~-~~~h~~~--v~~i~~~p~~~~~l~sgs~dg~--I~iwd~-------~~~ 362 (877)
.+++++..+ ..|.++|+... ..... +..|... +..+++ .+..++++...++. |.++|+ ..+
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~-~~~~~~li~~~~~~~l~~~~~--~~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g 408 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQP-SDWSHVLVDHSEDVFMESIAV--RSNYLVVAGRRAGLTRIWTMMADSQDGVFKAG 408 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTST-TCCCCEEECCCSSEEEEEEEE--CSSEEEEEEEETTEEEEEEEECCTTTSCCCTT
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCc-ccceeeEECCCCCcEEEEEEE--ECCEEEEEEEeCCEEEEEEEecccccccccCC
Confidence 444444433 25677776532 12222 3334443 344444 45668888888885 555564 233
Q ss_pred ceeEEecCcCCCCEEEEEE----cCCC-CEEEEEEcCC---eEEEEeCCC
Q psy13969 363 KEVGCIPQAHDNIIWTMAW----HPLG-HILATGSNDH---ASKFWTRNR 404 (877)
Q Consensus 363 ~~~~~~~~~h~~~V~~v~~----sp~g-~~l~sg~~dg---~v~iwd~~~ 404 (877)
+.+..+.......+..+.+ +.++ .++++.+... .|.++|+..
T Consensus 409 ~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~ 458 (751)
T 2xe4_A 409 TGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQD 458 (751)
T ss_dssp TCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTT
T ss_pred ccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 3133331111222344433 3454 4555555433 466666643
No 247
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.61 E-value=1.7e-05 Score=86.82 Aligned_cols=219 Identities=8% Similarity=-0.009 Sum_probs=140.6
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceE-EEccC---------CCCeeE-EEEcCCCCEEEEEECCCcEEEEeccCCeeeEEec
Q psy13969 171 GLWMVTSDHQGYIKYWQSNMNNVK-TFQGH---------KESIRG-ISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLR 239 (877)
Q Consensus 171 ~~~l~sg~~dg~v~iwd~~~~~~~-~~~~h---------~~~V~~-i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~ 239 (877)
+..|++++.++.|+.||.++..+. .+... ...+.+ +.. ++..|++++.++.|..+|..+++.+..+.
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 567777888899999998665443 33221 222322 233 45688889999999999999998877665
Q ss_pred cCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCe-----eEEEEccCCCeEEEEeCCCeEEEEE
Q psy13969 240 GHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTV-----MDLAWNQNGNWLVTASRDHLLKVFD 314 (877)
Q Consensus 240 ~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V-----~~l~~sp~g~~l~s~s~Dg~I~iwd 314 (877)
.......+.... +..+++++.++. |+.+|.++++.+..+....... ...... +..+++++.++.|..+|
T Consensus 131 ~~~~~~~~p~~~--~~~v~v~~~~g~--l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d 204 (376)
T 3q7m_A 131 VAGEALSRPVVS--DGLVLIHTSNGQ--LQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVL 204 (376)
T ss_dssp CSSCCCSCCEEE--TTEEEEECTTSE--EEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEE
T ss_pred CCCceEcCCEEE--CCEEEEEcCCCe--EEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEE
Confidence 443222222232 457788888888 9999999999887765432211 122222 45678888899999999
Q ss_pred cCCCCcceEEEecCCCC----------e-EEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcC
Q psy13969 315 IRNLSSEVQTFRGHKKE----------A-SAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHP 383 (877)
Q Consensus 315 ~~~~~~~~~~~~~h~~~----------v-~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp 383 (877)
..+. ..+......... + ....+. +. .++.++.++.|..+|..+++.+.... .....++...
T Consensus 205 ~~tG-~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~--~~-~v~~~~~~g~l~~~d~~tG~~~w~~~---~~~~~~~~~~- 276 (376)
T 3q7m_A 205 MEQG-QMIWQQRISQATGSTEIDRLSDVDTTPVVV--NG-VVFALAYNGNLTALDLRSGQIMWKRE---LGSVNDFIVD- 276 (376)
T ss_dssp TTTC-CEEEEEECCC-----------CCCCCCEEE--TT-EEEEECTTSCEEEEETTTCCEEEEEC---CCCEEEEEEE-
T ss_pred CCCC-cEEEEEecccCCCCcccccccccCCCcEEE--CC-EEEEEecCcEEEEEECCCCcEEeecc---CCCCCCceEE-
Confidence 9873 444333321100 1 111111 23 56677789999999999998776552 2234455543
Q ss_pred CCCEEEEEEcCCeEEEEeCCCCC
Q psy13969 384 LGHILATGSNDHASKFWTRNRLG 406 (877)
Q Consensus 384 ~g~~l~sg~~dg~v~iwd~~~~~ 406 (877)
+..|++++.++.|..||..+..
T Consensus 277 -~~~l~~~~~~g~l~~~d~~tG~ 298 (376)
T 3q7m_A 277 -GNRIYLVDQNDRVMALTIDGGV 298 (376)
T ss_dssp -TTEEEEEETTCCEEEEETTTCC
T ss_pred -CCEEEEEcCCCeEEEEECCCCc
Confidence 5678888889999999987643
No 248
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.59 E-value=0.0001 Score=89.48 Aligned_cols=274 Identities=9% Similarity=0.104 Sum_probs=170.9
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEc--cCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEec
Q psy13969 162 VRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQ--GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLR 239 (877)
Q Consensus 162 V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~--~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~ 239 (877)
|.++....++.+.+ +..++-|..|+........+. .+...|.+|....++.+.+ ++.+.-|.+||..+.+......
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~ 252 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLH 252 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECC
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeec
Confidence 88888888777655 455445888887665544332 2356788888877665444 5555458899987665443322
Q ss_pred c-------CCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEecc-------CCCCeeEEEEccCCCeEEEEe
Q psy13969 240 G-------HGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHA-------HKSTVMDLAWNQNGNWLVTAS 305 (877)
Q Consensus 240 ~-------h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~-------h~~~V~~l~~sp~g~~l~s~s 305 (877)
. ....|.++....++.+.+ ++.++ |.+||..+.+....... ....|.+|....++. |.+++
T Consensus 253 ~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~G---l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt 327 (795)
T 4a2l_A 253 SPSNPKSISSNYIRSLAMDSQNRLWI-GTFND---LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGT 327 (795)
T ss_dssp CTTCTTSCSCSBEEEEEECTTSCEEE-EESSC---EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEE
T ss_pred CCCCccccCCCeEEEEEEcCCCCEEE-EeCCh---hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEE
Confidence 1 235699999988877554 44554 89999887654332211 235799999998876 55667
Q ss_pred CCCeEEEEEcCCCCcceEEEec-------CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecC-------c
Q psy13969 306 RDHLLKVFDIRNLSSEVQTFRG-------HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ-------A 371 (877)
Q Consensus 306 ~Dg~I~iwd~~~~~~~~~~~~~-------h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-------~ 371 (877)
.++-|.+|+... ..+..+.. ....|.+++...++. |..|+.++-|.+||..+......... .
T Consensus 328 ~~~Gl~~~~~~~--~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~--lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l 403 (795)
T 4a2l_A 328 YFGGLNYYHPIR--NRFKNIRNIPYKNSLSDNVVSCIVEDKDKN--LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGI 403 (795)
T ss_dssp SSSCEEEECGGG--GSSEEECCCTTSSSCSCSSEEEEEECTTSC--EEEEESSSCEEEECTTTCCEEEECCC------CC
T ss_pred CCCCeEEeCCCc--ccceEEcCCCCCCCCCCCeeEEEEECCCCC--EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCC
Confidence 777789998764 22223221 234688999888776 45577777899999877654332211 1
Q ss_pred CCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecC
Q psy13969 372 HDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFP 451 (877)
Q Consensus 372 h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~ 451 (877)
....|.+++...++.+|.+++.++-|.+||..... ... +....-......|.++....++..++... .-+.+|+
T Consensus 404 ~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~--~~~-~~~~~~~l~~~~v~~i~~d~~g~lwigt~---~Gl~~~~ 477 (795)
T 4a2l_A 404 GSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ--VEN-FNQRNSQLVNENVYAILPDGEGNLWLGTL---SALVRFN 477 (795)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC--EEE-ECTTTSCCSCSCEEEEEECSSSCEEEEES---SCEEEEE
T ss_pred CCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc--EEE-eecCCCCcCCCeeEEEEECCCCCEEEEec---CceeEEe
Confidence 23579999998888856667777789999976421 111 11000001123466777776666665543 2344454
Q ss_pred C
Q psy13969 452 S 452 (877)
Q Consensus 452 ~ 452 (877)
.
T Consensus 478 ~ 478 (795)
T 4a2l_A 478 P 478 (795)
T ss_dssp T
T ss_pred C
Confidence 3
No 249
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.53 E-value=6.8e-05 Score=81.23 Aligned_cols=234 Identities=6% Similarity=-0.052 Sum_probs=147.1
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEE-CCCcEEEEeccCCeeeEEec
Q psy13969 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCS-DDGTVRVWDFYRCTEEKVLR 239 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs-~Dg~I~iwd~~~~~~~~~l~ 239 (877)
..+|.+..++ .+|+.+. ...|+..+++......+......+..|+|++....|+.+. ..+.|..+++........+.
T Consensus 35 ~~~C~~~~~~-~~ll~~~-~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 112 (349)
T 3v64_C 35 RRSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 112 (349)
T ss_dssp SSCEEESSSC-CEEEEEC-BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred CCcccccccC-ceeEeec-ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe
Confidence 3445555553 3444443 3457778877766655554555688999998666666554 56789999987655444444
Q ss_pred cCCCCeEEEEEcCCCCEEEEE-ecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEe-CC-CeEEEEEcC
Q psy13969 240 GHGADVKCVDWHPYKSLIVSG-SKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTAS-RD-HLLKVFDIR 316 (877)
Q Consensus 240 ~h~~~v~~v~~sp~~~~l~sg-s~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s-~D-g~I~iwd~~ 316 (877)
........|++++.+..|+.+ ...+. |.++++........+.........|+++|.+.+|+.+. .. ..|..+++.
T Consensus 113 ~~~~~p~glavd~~~g~ly~~d~~~~~--I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 113 TGLESPGGLAVDWVHDKLYWTDSGTSR--IEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTE--EEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCCCCccEEEEecCCCeEEEEcCCCCe--EEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 333456788998766555444 44455 99999875543333333445678999998666555554 44 678888876
Q ss_pred CCCcceEEE-ecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCC
Q psy13969 317 NLSSEVQTF-RGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDH 395 (877)
Q Consensus 317 ~~~~~~~~~-~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg 395 (877)
. .....+ ...-...+.|+|++++..++++-+..+.|..+|+........+ .........|++. .+.++++-...+
T Consensus 191 G--~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~-~~~~~~P~giav~-~~~ly~td~~~~ 266 (349)
T 3v64_C 191 G--SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVI-SQGLPHPFAITVF-EDSLYWTDWHTK 266 (349)
T ss_dssp S--CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSSCSSEEEEEEE-TTEEEEEETTTT
T ss_pred C--CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEE-eCCCCCceEEEEE-CCEEEEecCCCC
Confidence 5 222222 2233457899999988878777777788999998754333333 2234456778873 344444444566
Q ss_pred eEEEEeC
Q psy13969 396 ASKFWTR 402 (877)
Q Consensus 396 ~v~iwd~ 402 (877)
.|..++.
T Consensus 267 ~V~~~~~ 273 (349)
T 3v64_C 267 SINSANK 273 (349)
T ss_dssp EEEEEET
T ss_pred eEEEEEc
Confidence 7777763
No 250
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.53 E-value=7.1e-06 Score=83.19 Aligned_cols=178 Identities=11% Similarity=0.094 Sum_probs=123.9
Q ss_pred CeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCe--EEEEEcCCCCEEEE-EecCCcccEEEEcCCCCce
Q psy13969 202 SIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADV--KCVDWHPYKSLIVS-GSKDNQQPVKLWDPKAGQA 278 (877)
Q Consensus 202 ~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v--~~v~~sp~~~~l~s-gs~dg~~~I~iwd~~~~~~ 278 (877)
....|.|+ ++.++++.+.++.|+++|+.+++.+..+ .. ... ..+++. ++.|+. .-.++. +.+||..+.+.
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~--g~~Ly~ltw~~~~--v~V~D~~Tl~~ 128 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASD--GERLYQLTWTEGL--LFTWSGMPPQR 128 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEEC--SSCEEEEESSSCE--EEEEETTTTEE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEe--CCEEEEEEccCCE--EEEEECCcCcE
Confidence 34788887 4566777777889999999999988877 22 233 335554 444444 444555 99999999999
Q ss_pred eEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCC-----CCeEEEEEcCCCCcEEEEEeCCCc
Q psy13969 279 LATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHK-----KEASAVAWHPQHEGLFSSGGADGS 353 (877)
Q Consensus 279 ~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~-----~~v~~i~~~p~~~~~l~sgs~dg~ 353 (877)
+.++..-. .-..|+ +++..|+++..+..|+++|..+. +.+..+.... ..++.+.|. ++. +++..-.+..
T Consensus 129 ~~ti~~~~-eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~-~v~~~I~V~~~g~~v~~lNeLe~~-dG~-lyanvw~s~~ 202 (268)
T 3nok_A 129 ERTTRYSG-EGWGLC--YWNGKLVRSDGGTMLTFHEPDGF-ALVGAVQVKLRGQPVELINELECA-NGV-IYANIWHSSD 202 (268)
T ss_dssp EEEEECSS-CCCCEE--EETTEEEEECSSSEEEEECTTTC-CEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTCSE
T ss_pred EEEEeCCC-ceeEEe--cCCCEEEEECCCCEEEEEcCCCC-eEEEEEEeCCCCcccccccccEEe-CCE-EEEEECCCCe
Confidence 99886532 223444 46778888888999999998873 4555544321 245677877 554 7766666889
Q ss_pred EEEEEcCCCceeEEecCc------------CCCCEEEEEEcCCCCEEEEEE
Q psy13969 354 IMFWHVGADKEVGCIPQA------------HDNIIWTMAWHPLGHILATGS 392 (877)
Q Consensus 354 I~iwd~~~~~~~~~~~~~------------h~~~V~~v~~sp~g~~l~sg~ 392 (877)
|.+.|..+++.+..+... .....+.|||+++.+.|++.+
T Consensus 203 I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 203 VLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 999999999988776321 124678999999875555544
No 251
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.52 E-value=0.0002 Score=86.99 Aligned_cols=229 Identities=8% Similarity=0.091 Sum_probs=153.2
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEcc---------CCCCeeEEEEcCCCCEEEEEECCCcEEEEecc
Q psy13969 160 CAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQG---------HKESIRGISFSPSDSKFATCSDDGTVRVWDFY 230 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~---------h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~ 230 (877)
..|.++....++.+.+ |+.++-|.+|+..+.....+.. ....|.+|+...++++|.+++.++-|.+||..
T Consensus 357 ~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~ 435 (795)
T 4a2l_A 357 NVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRN 435 (795)
T ss_dssp SSEEEEEECTTSCEEE-EESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETT
T ss_pred CeeEEEEECCCCCEEE-EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCC
Confidence 4589999888887555 5666678889987766555431 23679999998888756677877789999987
Q ss_pred CCeeeEEec----cCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEec------cCCCCeeEEEEccCCCe
Q psy13969 231 RCTEEKVLR----GHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLH------AHKSTVMDLAWNQNGNW 300 (877)
Q Consensus 231 ~~~~~~~l~----~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~------~h~~~V~~l~~sp~g~~ 300 (877)
+++...... .+...|.++....++.+.+.. .++ |.+||..+++...... .....|.+|....++++
T Consensus 436 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~G---l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l 511 (795)
T 4a2l_A 436 SGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LSA---LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRL 511 (795)
T ss_dssp TCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SSC---EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCE
T ss_pred CCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cCc---eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCE
Confidence 765433322 234679999998888765544 454 8999988765432211 12357899999988876
Q ss_pred EEEEeCCCeEEEEEcCCCCcceEEEe-------cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCc--
Q psy13969 301 LVTASRDHLLKVFDIRNLSSEVQTFR-------GHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQA-- 371 (877)
Q Consensus 301 l~s~s~Dg~I~iwd~~~~~~~~~~~~-------~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-- 371 (877)
.+.. . +-|.+||..+. .. .+. .....|.+|....++. +.+ ++.. -|..||..+.+... +...
T Consensus 512 Wigt-~-~Gl~~~~~~~~-~~--~~~~~~~~~~l~~~~i~~i~~d~~g~-lWi-gT~~-Gl~~~d~~~~~~~~-~~~~~g 582 (795)
T 4a2l_A 512 WIGG-E-EGLSVFKQEGL-DI--QKASILPVSNVTKLFTNCIYEASNGI-IWV-GTRE-GFYCFNEKDKQIKR-YNTTNG 582 (795)
T ss_dssp EEEE-S-SCEEEEEEETT-EE--EECCCSCSCGGGGSCEEEEEECTTSC-EEE-EESS-CEEEEETTTTEEEE-ECGGGT
T ss_pred EEEe-C-CceEEEeCCCC-eE--EEecCCCCCCCCCCeeEEEEECCCCC-EEE-EeCC-CceeECCCCCcEEE-eCCCCC
Confidence 5544 4 45888988752 22 222 1345788999888887 444 3344 68889987765432 2111
Q ss_pred -CCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 372 -HDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 372 -h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
....|.++....++.+.+++ +.-|..|+...
T Consensus 583 l~~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~~~ 614 (795)
T 4a2l_A 583 LPNNVVYGILEDSFGRLWLST--NRGISCFNPET 614 (795)
T ss_dssp CSCSCEEEEEECTTSCEEEEE--TTEEEEEETTT
T ss_pred CchhheEEEEECCCCCEEEEc--CCceEEEcCCC
Confidence 23468999999888876665 35577787653
No 252
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.50 E-value=7.9e-06 Score=82.86 Aligned_cols=178 Identities=12% Similarity=0.175 Sum_probs=122.8
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeE--EEEcCCCCEEEEEECCCcEEEEeccCCeeeEEec
Q psy13969 162 VRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRG--ISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLR 239 (877)
Q Consensus 162 V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~--i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~ 239 (877)
...|.|+ ++.++++.+.++.|+++|+++.++.... -...... |++.. +++.++.-.++.+.+||..+.+.+.++.
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 4677776 4566678888899999998876543322 3333333 55542 3444444458899999999999998887
Q ss_pred cCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCC-----CCeeEEEEccCCCeEEEEeCCCeEEEEE
Q psy13969 240 GHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHK-----STVMDLAWNQNGNWLVTASRDHLLKVFD 314 (877)
Q Consensus 240 ~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~-----~~V~~l~~sp~g~~l~s~s~Dg~I~iwd 314 (877)
.. ..-..++ +++..|+++..++. |.++|..+.+.+.++.... ..++.+.|. +++.++....+..|.+.|
T Consensus 134 ~~-~eGwGLt--~Dg~~L~vSdGs~~--l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vID 207 (268)
T 3nok_A 134 YS-GEGWGLC--YWNGKLVRSDGGTM--LTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEID 207 (268)
T ss_dssp CS-SCCCCEE--EETTEEEEECSSSE--EEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEEC
T ss_pred CC-CceeEEe--cCCCEEEEECCCCE--EEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEe
Confidence 43 2224444 45777777665666 9999999999888875422 245677877 776666555788999999
Q ss_pred cCCCCcceEEEecC-------------CCCeEEEEEcCCCCcEEEEEe
Q psy13969 315 IRNLSSEVQTFRGH-------------KKEASAVAWHPQHEGLFSSGG 349 (877)
Q Consensus 315 ~~~~~~~~~~~~~h-------------~~~v~~i~~~p~~~~~l~sgs 349 (877)
..+ .+.+.++... ..-.+.|||+++...+|+||-
T Consensus 208 p~T-G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 208 PAT-GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TTT-CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCC-CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 988 4555555432 135688999999888998874
No 253
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.50 E-value=6.7e-05 Score=82.49 Aligned_cols=232 Identities=5% Similarity=-0.065 Sum_probs=147.4
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEE-CCCcEEEEeccCCeeeEEeccCC
Q psy13969 164 HMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCS-DDGTVRVWDFYRCTEEKVLRGHG 242 (877)
Q Consensus 164 ~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs-~Dg~I~iwd~~~~~~~~~l~~h~ 242 (877)
|.+..+ ..+|+.+. ...|+.++++...+..+......+..|+|++....|+.+. ..+.|..|++........+....
T Consensus 81 C~~~~~-~~~l~~~~-~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~ 158 (386)
T 3v65_B 81 CKALGP-EPVLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGL 158 (386)
T ss_dssp EEECSS-CCEEEEEC-BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSC
T ss_pred ECCccc-cceeEeec-CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCC
Confidence 444444 34444443 3568888887766665555556688999998666665554 56789999987655444444333
Q ss_pred CCeEEEEEcCCCCEEEEE-ecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeC-C-CeEEEEEcCCCC
Q psy13969 243 ADVKCVDWHPYKSLIVSG-SKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASR-D-HLLKVFDIRNLS 319 (877)
Q Consensus 243 ~~v~~v~~sp~~~~l~sg-s~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~-D-g~I~iwd~~~~~ 319 (877)
.....|++++.+..|+.+ ...+. |.++++........+.........|+++|.+.+|+.+.. . ..|..+++...
T Consensus 159 ~~p~glavd~~~g~lY~~d~~~~~--I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~- 235 (386)
T 3v65_B 159 ESPGGLAVDWVHDKLYWTDSGTSR--IEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS- 235 (386)
T ss_dssp SCCCCEEEETTTTEEEEEETTTTE--EEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-
T ss_pred CCccEEEEEeCCCeEEEEcCCCCe--EEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC-
Confidence 456778888766555544 44455 889988755433344444466789999987666665543 3 67888887652
Q ss_pred cceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEE
Q psy13969 320 SEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKF 399 (877)
Q Consensus 320 ~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~i 399 (877)
.........-...+.|+|++++..++++-+..+.|..+|+........+ .........|++. .+.++++-...+.|..
T Consensus 236 ~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~-~~~~~~P~giav~-~~~ly~td~~~~~V~~ 313 (386)
T 3v65_B 236 GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVI-SQGLPHPFAITVF-EDSLYWTDWHTKSINS 313 (386)
T ss_dssp SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEE-CSSCSSEEEEEEE-TTEEEEEETTTTEEEE
T ss_pred CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEE-ECCCCCceEEEEE-CCEEEEeeCCCCeEEE
Confidence 2222223334457899999887778887777788999998754433333 2334456778883 3445555556677777
Q ss_pred EeC
Q psy13969 400 WTR 402 (877)
Q Consensus 400 wd~ 402 (877)
++.
T Consensus 314 ~~~ 316 (386)
T 3v65_B 314 ANK 316 (386)
T ss_dssp EET
T ss_pred EEC
Confidence 774
No 254
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.48 E-value=0.00022 Score=75.99 Aligned_cols=225 Identities=8% Similarity=0.003 Sum_probs=139.4
Q ss_pred EEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEE-CCCcEEEEeccC----CeeeEEeccCCCCeEEE
Q psy13969 174 MVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCS-DDGTVRVWDFYR----CTEEKVLRGHGADVKCV 248 (877)
Q Consensus 174 l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs-~Dg~I~iwd~~~----~~~~~~l~~h~~~v~~v 248 (877)
|+.+.. ..|+..+++......+...-..+..++|++++..|+.+. .++.|..+++.. ......+.........|
T Consensus 4 ll~~~~-~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gl 82 (316)
T 1ijq_A 4 LFFTNR-HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 82 (316)
T ss_dssp EEEECB-SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEE
T ss_pred EEEECC-CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEE
Confidence 444433 457888877765555544556678999998766665555 468999999865 22222333233456789
Q ss_pred EEcCCCCEEEEE-ecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCC--CeEEEEEcCCCCcceEEE
Q psy13969 249 DWHPYKSLIVSG-SKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRD--HLLKVFDIRNLSSEVQTF 325 (877)
Q Consensus 249 ~~sp~~~~l~sg-s~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~D--g~I~iwd~~~~~~~~~~~ 325 (877)
++++.+..|+.+ ...+. |.++|+........+.........|+++|.+.+|+.+... +.|..+++.. .....+
T Consensus 83 avd~~~~~ly~~d~~~~~--I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG--~~~~~~ 158 (316)
T 1ijq_A 83 AVDWIHSNIYWTDSVLGT--VSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG--VDIYSL 158 (316)
T ss_dssp EEETTTTEEEEEETTTTE--EEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS--CCEEEE
T ss_pred EEeecCCeEEEEECCCCE--EEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC--CCeEEE
Confidence 998755555444 44555 9999987544333333334567899999866666665543 6788888764 222333
Q ss_pred -ecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecC-cCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCC
Q psy13969 326 -RGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ-AHDNIIWTMAWHPLGHILATGSNDHASKFWTRN 403 (877)
Q Consensus 326 -~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~ 403 (877)
...-...+.|+|++++..++++-+..+.|..+|+........+.. ........|++.. +.++++-...+.|..++..
T Consensus 159 ~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~-~~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 159 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRL 237 (316)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEEC-CEEEEEECCCCeEEEEeCC
Confidence 223356789999998887777777778999999875332222211 1223467788753 4555555566788888764
Q ss_pred C
Q psy13969 404 R 404 (877)
Q Consensus 404 ~ 404 (877)
.
T Consensus 238 ~ 238 (316)
T 1ijq_A 238 T 238 (316)
T ss_dssp T
T ss_pred C
Confidence 3
No 255
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.48 E-value=2.7e-05 Score=78.36 Aligned_cols=183 Identities=13% Similarity=0.159 Sum_probs=121.4
Q ss_pred CCEEEEEEcCCCCEEEEEeCC--CeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEE-ECCCcEEEEeccCCeeeE
Q psy13969 160 CAVRHMVWSHNGLWMVTSDHQ--GYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATC-SDDGTVRVWDFYRCTEEK 236 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~~d--g~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sg-s~Dg~I~iwd~~~~~~~~ 236 (877)
.....|.|+. +.++++.+.+ ..|+++|+.+.++.....-...........++..|... -.++.+.+||..+.+.+.
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ 99 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRA 99 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEE
Confidence 3356778875 4555555554 58999999887665433333333333222234455444 458899999999999998
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCC-----CCeeEEEEccCCCeEEEEeCCCeEE
Q psy13969 237 VLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHK-----STVMDLAWNQNGNWLVTASRDHLLK 311 (877)
Q Consensus 237 ~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~-----~~V~~l~~sp~g~~l~s~s~Dg~I~ 311 (877)
++.... .-..+++ ++..|+++..+.. |.++|..+.+.+.++.... ..++.+.|. +++.++..-.+..|.
T Consensus 100 ti~~~~-~Gwglt~--dg~~L~vSdgs~~--l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~ 173 (243)
T 3mbr_X 100 RFRYPG-EGWALTS--DDSHLYMSDGTAV--IRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIA 173 (243)
T ss_dssp EEECSS-CCCEEEE--CSSCEEEECSSSE--EEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEE
T ss_pred EEeCCC-CceEEee--CCCEEEEECCCCe--EEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEE
Confidence 887433 2345554 5666666555655 9999999999888876532 345667766 666666555678899
Q ss_pred EEEcCCCCcceEEEecC-------------CCCeEEEEEcCCCCcEEEEEeC
Q psy13969 312 VFDIRNLSSEVQTFRGH-------------KKEASAVAWHPQHEGLFSSGGA 350 (877)
Q Consensus 312 iwd~~~~~~~~~~~~~h-------------~~~v~~i~~~p~~~~~l~sgs~ 350 (877)
+.|.++ .+.+..+... ..-.+.|+|+++...+|+|+-.
T Consensus 174 vIDp~t-G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 174 RIDPAS-GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EECTTT-CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred EEECCC-CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 999988 4555554421 1356889999998888888743
No 256
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.47 E-value=3e-05 Score=77.94 Aligned_cols=185 Identities=11% Similarity=0.117 Sum_probs=125.4
Q ss_pred cCC--CCeeEEEEcCCCCEEEEEECC--CcEEEEeccCCeeeEEeccCCCC-eEEEEEcCCCCEEEEEe-cCCcccEEEE
Q psy13969 198 GHK--ESIRGISFSPSDSKFATCSDD--GTVRVWDFYRCTEEKVLRGHGAD-VKCVDWHPYKSLIVSGS-KDNQQPVKLW 271 (877)
Q Consensus 198 ~h~--~~V~~i~~sp~~~~l~sgs~D--g~I~iwd~~~~~~~~~l~~h~~~-v~~v~~sp~~~~l~sgs-~dg~~~I~iw 271 (877)
.|. .....|.|+. +.++.+.+.+ ..|+++|+.+++.+..+...... -..+++. ++.|+... .++. +.+|
T Consensus 16 phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~--v~v~ 90 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHE--GFVY 90 (243)
T ss_dssp ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSE--EEEE
T ss_pred CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCE--EEEE
Confidence 454 3466899985 5555555554 48999999999988877643321 1234443 44454444 4555 9999
Q ss_pred cCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCC-----CCeEEEEEcCCCCcEEE
Q psy13969 272 DPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHK-----KEASAVAWHPQHEGLFS 346 (877)
Q Consensus 272 d~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~-----~~v~~i~~~p~~~~~l~ 346 (877)
|..+.+.+.++.... .=..|+ .++..|+++..+..|.++|..+. +.+.++.... ..++.+.|. ++. +++
T Consensus 91 D~~tl~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~-~~~~~I~V~~~g~~~~~lNeLe~~-~G~-lya 164 (243)
T 3mbr_X 91 DLATLTPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTL-QQVGSIKVTAGGRPLDNLNELEWV-NGE-LLA 164 (243)
T ss_dssp ETTTTEEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTC-CEEEEEECEETTEECCCEEEEEEE-TTE-EEE
T ss_pred ECCcCcEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCC-eEEEEEEEccCCcccccceeeEEe-CCE-EEE
Confidence 999999999886533 224444 46777777778899999999884 4455544322 345667776 444 666
Q ss_pred EEeCCCcEEEEEcCCCceeEEecCc------------CCCCEEEEEEcCCCCEEEEEEc
Q psy13969 347 SGGADGSIMFWHVGADKEVGCIPQA------------HDNIIWTMAWHPLGHILATGSN 393 (877)
Q Consensus 347 sgs~dg~I~iwd~~~~~~~~~~~~~------------h~~~V~~v~~sp~g~~l~sg~~ 393 (877)
..-.+..|.+.|..+++.+..+... .....+.|||+++.+.|++.+.
T Consensus 165 nvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 165 NVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 6656789999999999988776321 2246789999998776666653
No 257
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.46 E-value=4.4e-05 Score=85.26 Aligned_cols=238 Identities=9% Similarity=0.111 Sum_probs=142.3
Q ss_pred CCEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCC-----cEEEEeccCC
Q psy13969 160 CAVRHMVWSHN--GLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDG-----TVRVWDFYRC 232 (877)
Q Consensus 160 ~~V~~l~~spd--~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg-----~I~iwd~~~~ 232 (877)
.....|+|+++ ...|+.++....|+.++.....+..+........+|+|+++++ |+++...+ .+..++....
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 34678999984 4555555555899999987777777766666789999999999 44444321 2333333221
Q ss_pred ee-eEEeccCCCCeEEEEEcC-CCCEEEEEecCCcccEEEEcCCCCceeEEecc--CCCCeeEEEEccCCCeEEEE-eCC
Q psy13969 233 TE-EKVLRGHGADVKCVDWHP-YKSLIVSGSKDNQQPVKLWDPKAGQALATLHA--HKSTVMDLAWNQNGNWLVTA-SRD 307 (877)
Q Consensus 233 ~~-~~~l~~h~~~v~~v~~sp-~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~--h~~~V~~l~~sp~g~~l~s~-s~D 307 (877)
.. ...+. .......+++++ ++.++++-..++. |+.+|..++.....+.. ....-..|+|++++++|+++ ...
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~--V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAM--ISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK 294 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSE--EEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCE--EEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence 11 11222 234456788999 5665555545566 99999987765333211 12233469999999855554 556
Q ss_pred CeEEEEEcCCCCcc---eEEEecC---------------CCCeEEEEE---------cCCCCcEEEEEeCCCcEEEEEcC
Q psy13969 308 HLLKVFDIRNLSSE---VQTFRGH---------------KKEASAVAW---------HPQHEGLFSSGGADGSIMFWHVG 360 (877)
Q Consensus 308 g~I~iwd~~~~~~~---~~~~~~h---------------~~~v~~i~~---------~p~~~~~l~sgs~dg~I~iwd~~ 360 (877)
..|+.+|+...... ...+.+. -.....|++ ..++. ++++-...+.|++++.
T Consensus 295 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~~n~~I~~~~~- 372 (433)
T 4hw6_A 295 HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDRDSHTVRVLTP- 372 (433)
T ss_dssp TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEETTTTEEEEECT-
T ss_pred CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEECCCCEEEEECC-
Confidence 78999886531111 1122211 123566888 45544 6666666778988885
Q ss_pred CCceeEEecCc----------------CCCCEEEEEEc-CCCCEEEEEEcCCeEEEEeCC
Q psy13969 361 ADKEVGCIPQA----------------HDNIIWTMAWH-PLGHILATGSNDHASKFWTRN 403 (877)
Q Consensus 361 ~~~~~~~~~~~----------------h~~~V~~v~~s-p~g~~l~sg~~dg~v~iwd~~ 403 (877)
++......-.. .-.....|+++ +++.++++=...+.|+.++++
T Consensus 373 ~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 373 EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 34322222110 11246789999 566666655566788877753
No 258
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.46 E-value=4.6e-05 Score=81.51 Aligned_cols=193 Identities=11% Similarity=0.061 Sum_probs=123.4
Q ss_pred CeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEecc--------------------CCCCeEEEEEcCCCCEEEEEe
Q psy13969 202 SIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRG--------------------HGADVKCVDWHPYKSLIVSGS 261 (877)
Q Consensus 202 ~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~--------------------h~~~v~~v~~sp~~~~l~sgs 261 (877)
...+++|++++++|+++..++.|..||..+.... .+.. ....+..|+++++...|+++.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 3567899999887888888999999998764432 2210 013578899997334455555
Q ss_pred cCCcccEEEEcCCCCceeEEecc-----CCCCeeEEEEcc-CCCeEEEEeC-----------------CCeEEEEEcCCC
Q psy13969 262 KDNQQPVKLWDPKAGQALATLHA-----HKSTVMDLAWNQ-NGNWLVTASR-----------------DHLLKVFDIRNL 318 (877)
Q Consensus 262 ~dg~~~I~iwd~~~~~~~~~~~~-----h~~~V~~l~~sp-~g~~l~s~s~-----------------Dg~I~iwd~~~~ 318 (877)
.... |..+|..+++. ..+.. .......|++.+ +++++++... ++.|..||....
T Consensus 99 ~~~~--i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 99 CYYH--LSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp TTTE--EEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred CCCC--EEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence 5555 88999876542 22211 123578899999 8887666533 366888887652
Q ss_pred CcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCc--eeEEecCcCCCCEEEEEEcCCCCEEEEEEc---
Q psy13969 319 SSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADK--EVGCIPQAHDNIIWTMAWHPLGHILATGSN--- 393 (877)
Q Consensus 319 ~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~--~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~--- 393 (877)
. +..+.........|+|++++..++++-+..+.|.+|++.... ....+.. ... ...|++.++++++++...
T Consensus 176 -~-~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~~~~ 251 (322)
T 2fp8_A 176 -E-TTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSEELD 251 (322)
T ss_dssp -E-EEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEEETT
T ss_pred -E-EEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecCccc
Confidence 2 222222223456799999988666666667899999987421 1111211 123 788999999987776654
Q ss_pred -------CCeEEEEeC
Q psy13969 394 -------DHASKFWTR 402 (877)
Q Consensus 394 -------dg~v~iwd~ 402 (877)
.+.|.++|.
T Consensus 252 ~~~~~~~~~~v~~~d~ 267 (322)
T 2fp8_A 252 GNMHGRVDPKGIKFDE 267 (322)
T ss_dssp SSTTSCEEEEEEEECT
T ss_pred ccccCCCccEEEEECC
Confidence 355777765
No 259
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.44 E-value=4e-05 Score=85.56 Aligned_cols=238 Identities=9% Similarity=0.073 Sum_probs=141.6
Q ss_pred CCEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECC-C----cEEEEeccCCe
Q psy13969 160 CAVRHMVWSH-NGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDD-G----TVRVWDFYRCT 233 (877)
Q Consensus 160 ~~V~~l~~sp-d~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~D-g----~I~iwd~~~~~ 233 (877)
.....|+|+| +...|+.++..+.|+.+|.+...+..+.........|+|++++++|+++... + .|.+++. .+.
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~ 215 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG 215 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence 3567889998 4556666665588999998887777766666678899999999977666652 1 3444443 222
Q ss_pred ee--EEeccCCCCeEEEEEcC-CCCEEEEEecCCcccEEEEcCCCCceeEEecc-CCCCeeEEEEccCCCeEEEE-eCCC
Q psy13969 234 EE--KVLRGHGADVKCVDWHP-YKSLIVSGSKDNQQPVKLWDPKAGQALATLHA-HKSTVMDLAWNQNGNWLVTA-SRDH 308 (877)
Q Consensus 234 ~~--~~l~~h~~~v~~v~~sp-~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~-h~~~V~~l~~sp~g~~l~s~-s~Dg 308 (877)
.. ..+. .......+++++ ++.++++-..++. |+.||.........+.. ....-..|+|++++++|+++ ....
T Consensus 216 ~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~--V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~ 292 (430)
T 3tc9_A 216 FKVITELT-KGQNCNGAETHPINGELYFNSWNAGQ--VFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQH 292 (430)
T ss_dssp SCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTE--EEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT
T ss_pred eeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCE--EEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCC
Confidence 21 2222 233467888999 5665555555566 99999887654222221 22456789999999955544 5678
Q ss_pred eEEEEEcCCCCcc---eEEEecC---------------CCCeE-EEEEcC--------CCCcEEEEEeCCCcEEEEEcCC
Q psy13969 309 LLKVFDIRNLSSE---VQTFRGH---------------KKEAS-AVAWHP--------QHEGLFSSGGADGSIMFWHVGA 361 (877)
Q Consensus 309 ~I~iwd~~~~~~~---~~~~~~h---------------~~~v~-~i~~~p--------~~~~~l~sgs~dg~I~iwd~~~ 361 (877)
.|..++....... +.++... -.... .++... ++. ++++-...+.|+.++. .
T Consensus 293 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~-lyvaD~~n~~I~~i~~-~ 370 (430)
T 3tc9_A 293 YILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYD-FYFCDRENHCIRILTP-Q 370 (430)
T ss_dssp EEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEE-EEEEEGGGTEEEEECT-T
T ss_pred EEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCe-EEEEECCCcEEEEECC-C
Confidence 8999887632111 1222211 01122 344432 232 5555555677888884 3
Q ss_pred CceeEEecC------c----------CCCCEEEEEEcCC-CCEEEEEEcCCeEEEEeCC
Q psy13969 362 DKEVGCIPQ------A----------HDNIIWTMAWHPL-GHILATGSNDHASKFWTRN 403 (877)
Q Consensus 362 ~~~~~~~~~------~----------h~~~V~~v~~sp~-g~~l~sg~~dg~v~iwd~~ 403 (877)
+......-. . .-...+.|+++++ +.++++-.....|+.++++
T Consensus 371 G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 371 GRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp SEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 433222211 0 0125789999985 5555555556778877753
No 260
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.43 E-value=0.00012 Score=74.59 Aligned_cols=202 Identities=11% Similarity=0.146 Sum_probs=134.0
Q ss_pred EEccCCCCeeEEEEcCCCCEE-EEEECCCcEEEEeccCCeeeEEecc-CCCCeEEEEEcCCCCEEEEEecCCcccEEEEc
Q psy13969 195 TFQGHKESIRGISFSPSDSKF-ATCSDDGTVRVWDFYRCTEEKVLRG-HGADVKCVDWHPYKSLIVSGSKDNQQPVKLWD 272 (877)
Q Consensus 195 ~~~~h~~~V~~i~~sp~~~~l-~sgs~Dg~I~iwd~~~~~~~~~l~~-h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd 272 (877)
.+.+-...+..|+|++++..| ++...++.|...|+. ++.++.+.. -......|++..++.++++.-.++. |.+++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~--l~~~~ 97 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYA--IYVIS 97 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTE--EEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCc--EEEEE
Confidence 444555679999999976655 456778899999987 777776642 2356888999988876665444555 88888
Q ss_pred CCCCce---eEEec------cCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCC--CCcceEEEe-------cCCCCeEE
Q psy13969 273 PKAGQA---LATLH------AHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRN--LSSEVQTFR-------GHKKEASA 334 (877)
Q Consensus 273 ~~~~~~---~~~~~------~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~--~~~~~~~~~-------~h~~~v~~ 334 (877)
+..... +.... ........|+|++.++.|+++.......||.+.. ....+..+. .+...+.+
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSG 177 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCE
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCcee
Confidence 765432 22221 1234568999999887777777655555555541 111222221 13346789
Q ss_pred EEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCc--C------CCCEEEEEEcCCCCEEEEEEcCCeEEEEe
Q psy13969 335 VAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQA--H------DNIIWTMAWHPLGHILATGSNDHASKFWT 401 (877)
Q Consensus 335 i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~--h------~~~V~~v~~sp~g~~l~sg~~dg~v~iwd 401 (877)
|+++|...++++.......|.++|.... .+..+.-. . -..--.|+|.++|++.+ .++-+.+++|.
T Consensus 178 l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI-vsE~n~~y~f~ 250 (255)
T 3qqz_A 178 AEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI-VSEPNRFYRFT 250 (255)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE-EETTTEEEEEE
T ss_pred EEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCCEEE-EcCCceEEEEE
Confidence 9999998888888888889999997644 44443211 1 12567899999998444 47777666664
No 261
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.37 E-value=1.2e-05 Score=95.23 Aligned_cols=239 Identities=10% Similarity=0.084 Sum_probs=136.5
Q ss_pred EEEEcC-CCCEEEEEeCCC-----------eEEEEeCCCcceE---EE-ccCCCCeeEEEEcCCCCEEEEEEC-CCcEEE
Q psy13969 164 HMVWSH-NGLWMVTSDHQG-----------YIKYWQSNMNNVK---TF-QGHKESIRGISFSPSDSKFATCSD-DGTVRV 226 (877)
Q Consensus 164 ~l~~sp-d~~~l~sg~~dg-----------~v~iwd~~~~~~~---~~-~~h~~~V~~i~~sp~~~~l~sgs~-Dg~I~i 226 (877)
++++.+ ++++++.|+.+. .+.+||..+.... .+ ..+...+.++++..+++++++++. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556666 888888876542 6889997765433 22 223444556788889999999884 568999
Q ss_pred EeccCCeeeEEeccC-CCCeEEEEEcCCCCEEEEEe-cCCc---ccEEEEcCCCCceeEEecc-----CCCCeeEEEEcc
Q psy13969 227 WDFYRCTEEKVLRGH-GADVKCVDWHPYKSLIVSGS-KDNQ---QPVKLWDPKAGQALATLHA-----HKSTVMDLAWNQ 296 (877)
Q Consensus 227 wd~~~~~~~~~l~~h-~~~v~~v~~sp~~~~l~sgs-~dg~---~~I~iwd~~~~~~~~~~~~-----h~~~V~~l~~sp 296 (877)
||..+.+-...-..+ ...-.++++.+++++++.|+ .++. ..+.+||..+.+-. .+.. ....-....+..
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~-~~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT-SLPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE-EETTSCSGGGCCCCTTGGGTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce-eCCCccccccccccccceeec
Confidence 998876543322112 12224556667889888888 3421 23899999876532 2210 000000011123
Q ss_pred CCCeEEEEeCC---------CeEEEEEcCCCCcceEEEecCC---------CCeEEEEEcCCCCcEEEEEeCCC------
Q psy13969 297 NGNWLVTASRD---------HLLKVFDIRNLSSEVQTFRGHK---------KEASAVAWHPQHEGLFSSGGADG------ 352 (877)
Q Consensus 297 ~g~~l~s~s~D---------g~I~iwd~~~~~~~~~~~~~h~---------~~v~~i~~~p~~~~~l~sgs~dg------ 352 (877)
++..++.++.| ..|.+||..... -......+. ..-.++.|...+..+++.|+.+.
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~-w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~ 427 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSG-DVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDA 427 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTC-EEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBC
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcc-eeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCc
Confidence 44455555433 457788887632 122221111 12345555544455888887532
Q ss_pred -----cEEEEEcCCCceeEEe-cCcCCCC-EEEEEEcCCCCEEEEEEcC-----------CeEEEEeCCC
Q psy13969 353 -----SIMFWHVGADKEVGCI-PQAHDNI-IWTMAWHPLGHILATGSND-----------HASKFWTRNR 404 (877)
Q Consensus 353 -----~I~iwd~~~~~~~~~~-~~~h~~~-V~~v~~sp~g~~l~sg~~d-----------g~v~iwd~~~ 404 (877)
.|.+||..+..-.... ...+... -.++++.++++++++++.+ ..+.+||..+
T Consensus 428 ~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 428 TTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ 497 (656)
T ss_dssp CCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG
T ss_pred CCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCC
Confidence 5778888776543322 1112222 2345667899999999865 4688898754
No 262
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.37 E-value=0.00048 Score=75.95 Aligned_cols=227 Identities=8% Similarity=-0.003 Sum_probs=144.3
Q ss_pred EEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEE-CCCcEEEEeccCC----eeeEEeccCCCCeEE
Q psy13969 173 WMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCS-DDGTVRVWDFYRC----TEEKVLRGHGADVKC 247 (877)
Q Consensus 173 ~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs-~Dg~I~iwd~~~~----~~~~~l~~h~~~v~~ 247 (877)
+|+.+. ...|+..+++......+......+..|+|++....|+.+. ..+.|+.+++... .....+.........
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 163 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 163 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEE
T ss_pred eeEEec-cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCccc
Confidence 444443 4678888888776666666667788999998766666665 4678999988652 233333334456788
Q ss_pred EEEcCCCCEEEEE-ecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeC--CCeEEEEEcCCCCcceEE
Q psy13969 248 VDWHPYKSLIVSG-SKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASR--DHLLKVFDIRNLSSEVQT 324 (877)
Q Consensus 248 v~~sp~~~~l~sg-s~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~--Dg~I~iwd~~~~~~~~~~ 324 (877)
|++...+..|+.+ ...+. |.+.|+........+.........|+++|.+.+|+.+.. ...|...++... .....
T Consensus 164 lavD~~~~~lY~~d~~~~~--I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~-~~~~~ 240 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGT--VSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSL 240 (400)
T ss_dssp EEEETTTTEEEEEETTTTE--EEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC-SCEEE
T ss_pred EEEEecCCceEEEECCCCe--EEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC-ccEEE
Confidence 9998755555544 44455 999998765544444444556889999997666666653 367888888652 22222
Q ss_pred EecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecC-cCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCC
Q psy13969 325 FRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ-AHDNIIWTMAWHPLGHILATGSNDHASKFWTRN 403 (877)
Q Consensus 325 ~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~ 403 (877)
+...-...+.|++++++..|+++-+....|..+|+........+.. ..-.....|++.. +.++++-...+.|..++..
T Consensus 241 ~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~-~~lywtd~~~~~V~~~~~~ 319 (400)
T 3p5b_L 241 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRL 319 (400)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEET-TEEEEEESSSCSEEEEESS
T ss_pred EECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeC-CEEEEecCCCCeEEEEEcC
Confidence 2333357789999998887777766678899999865443332211 1223456777733 3445555556677777743
Q ss_pred C
Q psy13969 404 R 404 (877)
Q Consensus 404 ~ 404 (877)
+
T Consensus 320 ~ 320 (400)
T 3p5b_L 320 T 320 (400)
T ss_dssp S
T ss_pred C
Confidence 3
No 263
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.35 E-value=6.5e-05 Score=79.74 Aligned_cols=229 Identities=11% Similarity=0.060 Sum_probs=135.0
Q ss_pred CCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeE
Q psy13969 201 ESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALA 280 (877)
Q Consensus 201 ~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~ 280 (877)
.....++|+++++++++-..++.|..||... .....+. ....+..|+++++++++++........|..+|..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 4577899999988777666789999999765 3333333 3456889999999986655433221126777877776433
Q ss_pred Eec-cCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEe---------cCCCCeEEEEEcCCCCcEEEEEeC
Q psy13969 281 TLH-AHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFR---------GHKKEASAVAWHPQHEGLFSSGGA 350 (877)
Q Consensus 281 ~~~-~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~---------~h~~~v~~i~~~p~~~~~l~sgs~ 350 (877)
... ........++..+++..+++-..++.|+++|.......+.... ..-...+.| ++++..++++-+.
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~ 187 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE 187 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC
Confidence 222 1122334555555555455555688899998764211111110 011233455 7788767777777
Q ss_pred CCcEEEEEcCC-Cce--eEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeee
Q psy13969 351 DGSIMFWHVGA-DKE--VGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYN 427 (877)
Q Consensus 351 dg~I~iwd~~~-~~~--~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 427 (877)
.+.|.+||+.. +.. ...+.. ......|+++++++++++....+.|.+|+.. +..... ..+........+
T Consensus 188 ~~~I~~~~~~~~g~~~~~~~~~~--~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~--G~~~~~----~~~~~~~~~p~~ 259 (306)
T 2p4o_A 188 KMLLLRIPVDSTDKPGEPEIFVE--QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD--RSTTII----AQAEQGVIGSTA 259 (306)
T ss_dssp TTEEEEEEBCTTSCBCCCEEEEE--SCCCSSEEEBTTCCEEEECBTTCCEEEECTT--CCEEEE----ECGGGTCTTEEE
T ss_pred CCEEEEEEeCCCCCCCccEEEec--cCCCCCeEECCCCCEEEEeCCCCeEEEECCC--CCEEEE----eecccccCCceE
Confidence 88999999874 221 111101 1234568999999887777777889999864 222110 001111233566
Q ss_pred eecc---CCCCeEEecc
Q psy13969 428 EEME---LNDSAVIPGM 441 (877)
Q Consensus 428 ~~~~---~d~~~l~~~~ 441 (877)
++|. ++...|+...
T Consensus 260 ~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 260 VAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp EEECCSTTTTTEEEEEE
T ss_pred EEEecccCCCCEEEEEC
Confidence 7776 6656665544
No 264
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.34 E-value=1e-05 Score=95.82 Aligned_cols=232 Identities=13% Similarity=0.141 Sum_probs=144.7
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceE-EEccCC----CCeeE-EEEcCCCCEEEEEEC------CCcEEEEeccCCeeeEEe
Q psy13969 171 GLWMVTSDHQGYIKYWQSNMNNVK-TFQGHK----ESIRG-ISFSPSDSKFATCSD------DGTVRVWDFYRCTEEKVL 238 (877)
Q Consensus 171 ~~~l~sg~~dg~v~iwd~~~~~~~-~~~~h~----~~V~~-i~~sp~~~~l~sgs~------Dg~I~iwd~~~~~~~~~l 238 (877)
+..|++++.++.|+.+|..+.++. .+.... ..+.+ ..+ .+..|++++. ++.|..||..+++.+..+
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 457778888999999997765433 333211 11111 111 1335555543 589999999999988776
Q ss_pred ccCC-------------------------------CCeEEEEEcCCCCEEEEEecCCc-----------------ccEEE
Q psy13969 239 RGHG-------------------------------ADVKCVDWHPYKSLIVSGSKDNQ-----------------QPVKL 270 (877)
Q Consensus 239 ~~h~-------------------------------~~v~~v~~sp~~~~l~sgs~dg~-----------------~~I~i 270 (877)
.... ....+++++++..++++++.++. ..|..
T Consensus 195 ~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~A 274 (668)
T 1kv9_A 195 YTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILA 274 (668)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred cccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 5210 01124688888888888876541 13899
Q ss_pred EcCCCCceeEEecc--CC-------CCeeEEEEccCCC---eEEEEeCCCeEEEEEcCCCCcceEEEecCCC--------
Q psy13969 271 WDPKAGQALATLHA--HK-------STVMDLAWNQNGN---WLVTASRDHLLKVFDIRNLSSEVQTFRGHKK-------- 330 (877)
Q Consensus 271 wd~~~~~~~~~~~~--h~-------~~V~~l~~sp~g~---~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~-------- 330 (877)
+|.++++.+..+.. |. ..+....+..+++ .|++++.++.|+++|..+ .+.+..+.....
T Consensus 275 lD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~l~~~~~~~~~w~~~~d~ 353 (668)
T 1kv9_A 275 IRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTN-GKLISAEKFGKVTWAEKVDL 353 (668)
T ss_dssp ECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEESSCCCSEEEECT
T ss_pred EcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCC-CCEecccccccccccccccc
Confidence 99999998887754 22 2222233334564 688899999999999887 344422211110
Q ss_pred ----C------------------------eEEEEEcCCCCcEEEEE----------------------------------
Q psy13969 331 ----E------------------------ASAVAWHPQHEGLFSSG---------------------------------- 348 (877)
Q Consensus 331 ----~------------------------v~~i~~~p~~~~~l~sg---------------------------------- 348 (877)
. -..++++|+...+++..
T Consensus 354 ~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~ 433 (668)
T 1kv9_A 354 ATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPA 433 (668)
T ss_dssp TTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCG
T ss_pred ccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCC
Confidence 0 01256777766333311
Q ss_pred -eCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCC
Q psy13969 349 -GADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGD 407 (877)
Q Consensus 349 -s~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~ 407 (877)
..++.|..||+.+++.+-.+.. ...+....+...+.+|++++.|+.|++||..+...
T Consensus 434 ~~~~g~l~A~D~~tG~~~W~~~~--~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 434 AVVSGALLAWDPVKQKAAWKVPY--PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp GGCEEEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred CCccceEEEEeCCCCcEEEEccC--CCCCcCceeEeCCCEEEEECCcccchhhhhhcChh
Confidence 1347899999999988766522 22333334445677899999999999999976433
No 265
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.32 E-value=1.6e-05 Score=95.77 Aligned_cols=196 Identities=14% Similarity=0.136 Sum_probs=120.1
Q ss_pred CeeEEEEc-CCCCEEEEEEC-CC----cEEEEeccCC-eeeE-EeccCCCCeEEEEEcCCCCEEEEEecCCc---ccEEE
Q psy13969 202 SIRGISFS-PSDSKFATCSD-DG----TVRVWDFYRC-TEEK-VLRGHGADVKCVDWHPYKSLIVSGSKDNQ---QPVKL 270 (877)
Q Consensus 202 ~V~~i~~s-p~~~~l~sgs~-Dg----~I~iwd~~~~-~~~~-~l~~h~~~v~~v~~sp~~~~l~sgs~dg~---~~I~i 270 (877)
.+..++|| ||+++||.+.. +| +|+++|+.++ +.+. .+. ....+++|+||++.|+....+.. ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67889999 99998876654 32 5999999887 5321 111 12357899999988877776521 13888
Q ss_pred EcCCCCce--eEEec-cCCCCeeEEEEccCCCeEEEEeC---CCeEEEEEcCCCCcce--EEEe-cCCCCeEEEEEcCCC
Q psy13969 271 WDPKAGQA--LATLH-AHKSTVMDLAWNQNGNWLVTASR---DHLLKVFDIRNLSSEV--QTFR-GHKKEASAVAWHPQH 341 (877)
Q Consensus 271 wd~~~~~~--~~~~~-~h~~~V~~l~~sp~g~~l~s~s~---Dg~I~iwd~~~~~~~~--~~~~-~h~~~v~~i~~~p~~ 341 (877)
+++.+... +..+. .+.....++.||+|+++|+..+. ...|+++|+....... ..+. .......++.|+. +
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g 330 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-T 330 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-T
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-C
Confidence 99887642 22332 23345678899999999887763 3458889987632222 3333 2344556666654 4
Q ss_pred CcEEEEEeCC----CcEEEEEcCCCceeE--EecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeC
Q psy13969 342 EGLFSSGGAD----GSIMFWHVGADKEVG--CIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTR 402 (877)
Q Consensus 342 ~~~l~sgs~d----g~I~iwd~~~~~~~~--~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~ 402 (877)
..++++...+ ..|.++|+.+..... .+.......+.++++. .+.++++...++..+||-+
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~ 396 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTM 396 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEE
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEE
Confidence 5466665554 357777776422222 2311222245667776 3456777778886555543
No 266
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.23 E-value=4e-05 Score=88.86 Aligned_cols=232 Identities=13% Similarity=0.115 Sum_probs=139.3
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceE-EEccCC----CCeeE-EEEcCCCCEEEEEEC------CCcEEEEeccCCeeeEEe
Q psy13969 171 GLWMVTSDHQGYIKYWQSNMNNVK-TFQGHK----ESIRG-ISFSPSDSKFATCSD------DGTVRVWDFYRCTEEKVL 238 (877)
Q Consensus 171 ~~~l~sg~~dg~v~iwd~~~~~~~-~~~~h~----~~V~~-i~~sp~~~~l~sgs~------Dg~I~iwd~~~~~~~~~l 238 (877)
+..|++++.++.|+.+|..+.++. .+.... ..+.+ .... + ..|++++. ++.|..+|..+++.+..+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-K-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-T-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-C-CEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 557778888999999998765543 222111 01211 1111 3 45566554 789999999999888766
Q ss_pred ccCCCC--------------------------------------eEEEEEcCCCCEEEEEecC------------C--cc
Q psy13969 239 RGHGAD--------------------------------------VKCVDWHPYKSLIVSGSKD------------N--QQ 266 (877)
Q Consensus 239 ~~h~~~--------------------------------------v~~v~~sp~~~~l~sgs~d------------g--~~ 266 (877)
...... ...+++.++..+|+.++.+ . ..
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 532110 0235666766677666532 1 01
Q ss_pred cEEEEcCCCCceeEEeccC--CC----CeeE---EEEccCCC---eEEEEeCCCeEEEEEcCCCCcceEEEecCC-----
Q psy13969 267 PVKLWDPKAGQALATLHAH--KS----TVMD---LAWNQNGN---WLVTASRDHLLKVFDIRNLSSEVQTFRGHK----- 329 (877)
Q Consensus 267 ~I~iwd~~~~~~~~~~~~h--~~----~V~~---l~~sp~g~---~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~----- 329 (877)
.|..+|.++++.+..+... .. .+.+ +....+++ .|++++.++.|+++|..+ .+.+..+....
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNREN-GNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTT-CCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCC-CCEEeeecccCCcccc
Confidence 3999999999988777532 11 1111 22224663 577788899999999887 34444333211
Q ss_pred --------CCe--------------------------EEEEEcCCCCcEEEEEe--------------------------
Q psy13969 330 --------KEA--------------------------SAVAWHPQHEGLFSSGG-------------------------- 349 (877)
Q Consensus 330 --------~~v--------------------------~~i~~~p~~~~~l~sgs-------------------------- 349 (877)
.++ ..++++|+...+++...
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 011 23567777664443321
Q ss_pred ----------CCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCC
Q psy13969 350 ----------ADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGD 407 (877)
Q Consensus 350 ----------~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~ 407 (877)
.++.|..||+.+++.+-.+.. ...+.+..+...+.+|++++.|+.|++||..+...
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~--~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE--KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEE--SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEecC--CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCE
Confidence 357899999999887766522 22222223333456788899999999999877443
No 267
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.22 E-value=0.001 Score=80.54 Aligned_cols=265 Identities=10% Similarity=0.055 Sum_probs=160.5
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEcc----------CCCCeeEEEEcCCCCEEEEEECCCcEEEEec
Q psy13969 160 CAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQG----------HKESIRGISFSPSDSKFATCSDDGTVRVWDF 229 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~----------h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~ 229 (877)
..|.+|....++.+.+ ++.++-|.+|+........+.. ....|.+|+...++++ ..++.++-|.+||.
T Consensus 313 ~~v~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~ 390 (781)
T 3v9f_A 313 ASARYIFQDSFNNIWI-GTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKL-WIGTDGGGINVFEN 390 (781)
T ss_dssp SCEEEEEECSSCCEEE-EEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCE-EEEEBSSCEEEEET
T ss_pred CeEEEEEEeCCCCEEE-EecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCE-EEEeCCCcEEEEEC
Confidence 4688888888777444 5556667888876655544421 2356999999877764 45666667889987
Q ss_pred cCCeeeEEe---ccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEec--cCCCCeeEEEEccCCCeEEEE
Q psy13969 230 YRCTEEKVL---RGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLH--AHKSTVMDLAWNQNGNWLVTA 304 (877)
Q Consensus 230 ~~~~~~~~l---~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~--~h~~~V~~l~~sp~g~~l~s~ 304 (877)
.+....... ......|.+++...++.+.+ ++.++- |.+||.++++...... .....|.+|....++.+. ++
T Consensus 391 ~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~G--l~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lw-ig 466 (781)
T 3v9f_A 391 GKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGN--ISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIW-IG 466 (781)
T ss_dssp TEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEE--EEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEE-EE
T ss_pred CCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCC--EEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEE-EE
Confidence 654332211 12346789999887776554 665554 9999987765332211 234679999988877644 44
Q ss_pred eCCCeEEEEEcCCCCcceEEEecC-----CCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCc---CCCCE
Q psy13969 305 SRDHLLKVFDIRNLSSEVQTFRGH-----KKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQA---HDNII 376 (877)
Q Consensus 305 s~Dg~I~iwd~~~~~~~~~~~~~h-----~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~---h~~~V 376 (877)
+. .-|.+||..+. ......... ...|.+|+...++. + ..++.++-|..||..+.+... +... ....|
T Consensus 467 t~-~Gl~~~~~~~~-~~~~~~~~~~~~~~~~~i~~i~~d~~g~-l-Wigt~~~Gl~~~~~~~~~~~~-~~~~~~l~~~~i 541 (781)
T 3v9f_A 467 TH-AGVFVIDLASK-KVIHHYDTSNSQLLENFVRSIAQDSEGR-F-WIGTFGGGVGIYTPDMQLVRK-FNQYEGFCSNTI 541 (781)
T ss_dssp ET-TEEEEEESSSS-SCCEEECTTTSSCSCSCEEEEEECTTCC-E-EEEESSSCEEEECTTCCEEEE-ECTTTTCSCSCE
T ss_pred EC-CceEEEeCCCC-eEEecccCcccccccceeEEEEEcCCCC-E-EEEEcCCCEEEEeCCCCeEEE-ccCCCCCCCCee
Confidence 55 56889998762 222222111 35789999888876 4 445554457888887654333 3111 24578
Q ss_pred EEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEec
Q psy13969 377 WTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPG 440 (877)
Q Consensus 377 ~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~ 440 (877)
.++....++.+.++. .+|.|..||..... +........+. ...+.++....++...+.+
T Consensus 542 ~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~--~~~~~~~~gl~--~~~i~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 542 NQIYRSSKGQMWLAT-GEGLVCFPSARNFD--YQVFQRKEGLP--NTHIRAISEDKNGNIWAST 600 (781)
T ss_dssp EEEEECTTSCEEEEE-TTEEEEESCTTTCC--CEEECGGGTCS--CCCCCEEEECSSSCEEEEC
T ss_pred EEEEECCCCCEEEEE-CCCceEEECCCCCc--EEEccccCCCC--CceEEEEEECCCCCEEEEc
Confidence 999999888866554 46665888875421 11111111111 1224566666666666654
No 268
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.22 E-value=0.00041 Score=70.69 Aligned_cols=195 Identities=13% Similarity=0.128 Sum_probs=123.8
Q ss_pred CCEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCcceEEEc-cCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCee---
Q psy13969 160 CAVRHMVWSHNGLWM-VTSDHQGYIKYWQSNMNNVKTFQ-GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTE--- 234 (877)
Q Consensus 160 ~~V~~l~~spd~~~l-~sg~~dg~v~iwd~~~~~~~~~~-~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~--- 234 (877)
..+..|+|++++..| ++...++.|...|.+...+..+. .-......|++..++.++++.-.+..|.++++.....
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~ 106 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKI 106 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeee
Confidence 457788888865544 45777888999998855555543 2224678899998887666655678899998765432
Q ss_pred eEEec------cCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCC-CCceeEEec-------cCCCCeeEEEEcc-CCC
Q psy13969 235 EKVLR------GHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPK-AGQALATLH-------AHKSTVMDLAWNQ-NGN 299 (877)
Q Consensus 235 ~~~l~------~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~-~~~~~~~~~-------~h~~~V~~l~~sp-~g~ 299 (877)
+.... ........|+|++.++.|+++.......|+.|+-. ....+..+. .+...+.+|+|+| .++
T Consensus 107 ~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~ 186 (255)
T 3qqz_A 107 LKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNT 186 (255)
T ss_dssp EEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTE
T ss_pred eeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCe
Confidence 12221 13445689999999987777776655235555511 111222221 1344678999999 455
Q ss_pred eEEEEeCCCeEEEEEcCCCCcceEEEecCC---------CCeEEEEEcCCCCcEEEEEeCCCcEEEEE
Q psy13969 300 WLVTASRDHLLKVFDIRNLSSEVQTFRGHK---------KEASAVAWHPQHEGLFSSGGADGSIMFWH 358 (877)
Q Consensus 300 ~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~---------~~v~~i~~~p~~~~~l~sgs~dg~I~iwd 358 (877)
+++.+.....|.++|... ..+..+.-.. ..-..|+|.+++. ++++ ++-+.+++|.
T Consensus 187 lliLS~~s~~L~~~d~~g--~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 187 LLVLSHESRALQEVTLVG--EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIV-SEPNRFYRFT 250 (255)
T ss_dssp EEEEETTTTEEEEECTTC--CEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEE-ETTTEEEEEE
T ss_pred EEEEECCCCeEEEEcCCC--CEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEE-cCCceEEEEE
Confidence 666666777889999775 3333332221 2457899999997 5555 6666666654
No 269
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.17 E-value=0.0021 Score=77.74 Aligned_cols=267 Identities=10% Similarity=0.007 Sum_probs=160.0
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEcc--------CCCCeeEEEEcCCCCEEEEEECCCcEEEEeccC
Q psy13969 160 CAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQG--------HKESIRGISFSPSDSKFATCSDDGTVRVWDFYR 231 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~--------h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~ 231 (877)
..|.+|....++.+.+... + -|.+||........+.. ....|++|....++. |..++..+-|.++|..+
T Consensus 211 ~~i~~i~~d~~g~lwigt~-~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~ 287 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGTS-K-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQ 287 (781)
T ss_dssp SSEEEEEECTTCCEEEEET-T-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTC
T ss_pred CceeEEEEcCCCCEEEEeC-C-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCC
Confidence 5689999888888766543 4 58889876655443321 245699999887765 55566656788899866
Q ss_pred CeeeEEec--------------cCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEec---------cCCCC
Q psy13969 232 CTEEKVLR--------------GHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLH---------AHKST 288 (877)
Q Consensus 232 ~~~~~~l~--------------~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~---------~h~~~ 288 (877)
........ .....|.+|....++. |.+++.++- |..|+..+........ .....
T Consensus 288 ~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~G--l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 364 (781)
T 3v9f_A 288 NQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGG--INFISNAPPTFHTWSYSPTQMNESSLSNKV 364 (781)
T ss_dssp C---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSC--EEEECSSCCSCEEEC----CCCSSCCSSSC
T ss_pred CeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCe--EEEeCCCCCcceeeccCccccccCCCCCcc
Confidence 54322211 1345789999988776 455665554 9999987654322211 12356
Q ss_pred eeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEE----ecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCce
Q psy13969 289 VMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTF----RGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKE 364 (877)
Q Consensus 289 V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~----~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~ 364 (877)
|.+|+...++. |.+++.++-|.+||..+ ..+..+ ......|.+++...++. |..++.++-|.+||..+.+.
T Consensus 365 v~~i~~d~~g~-lWigt~~~Gl~~~~~~~--~~~~~~~~~~~~~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 365 VSSVCDDGQGK-LWIGTDGGGINVFENGK--RVAIYNKENRELLSNSVLCSLKDSEGN--LWFGTYLGNISYYNTRLKKF 439 (781)
T ss_dssp EEEEEECTTSC-EEEEEBSSCEEEEETTE--EEEECC-----CCCSBEEEEEECTTSC--EEEEETTEEEEEECSSSCEE
T ss_pred eEEEEEcCCCC-EEEEeCCCcEEEEECCC--CeEEEccCCCCCCCcceEEEEECCCCC--EEEEeccCCEEEEcCCCCcE
Confidence 99999888776 55566566688898764 111111 12345788888887776 44566667789999877654
Q ss_pred eEEec-CcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEecc
Q psy13969 365 VGCIP-QAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGM 441 (877)
Q Consensus 365 ~~~~~-~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~ 441 (877)
..... ......|.++....++.+.+ ++. +-|.+|+..... +...............+.++....++..++...
T Consensus 440 ~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~--~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~ 513 (781)
T 3v9f_A 440 QIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKK--VIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF 513 (781)
T ss_dssp EECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSS--CCEEECTTTSSCSCSCEEEEEECTTCCEEEEES
T ss_pred EEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCe--EEecccCcccccccceeEEEEEcCCCCEEEEEc
Confidence 32221 12346799999988876554 444 568888875421 111111000001123466676776666666543
No 270
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.16 E-value=0.004 Score=66.08 Aligned_cols=205 Identities=13% Similarity=0.050 Sum_probs=127.4
Q ss_pred cCCEEEEEEcCCCCEEE-EEeCCCeEEEEeCCC----cceEE-EccCCCCeeEEEEcCCCCEEEEE-ECCCcEEEEeccC
Q psy13969 159 DCAVRHMVWSHNGLWMV-TSDHQGYIKYWQSNM----NNVKT-FQGHKESIRGISFSPSDSKFATC-SDDGTVRVWDFYR 231 (877)
Q Consensus 159 ~~~V~~l~~spd~~~l~-sg~~dg~v~iwd~~~----~~~~~-~~~h~~~V~~i~~sp~~~~l~sg-s~Dg~I~iwd~~~ 231 (877)
...+..++|++++..|+ +-...+.|+.++.+. ..... +...-.....|++.+.+..|+.+ ..++.|.++|+..
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 45578899998665555 445568999999775 23233 32233456789998655555444 5678999999865
Q ss_pred CeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEe-ccCCCCeeEEEEccCCCeEEEEe-CCCe
Q psy13969 232 CTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATL-HAHKSTVMDLAWNQNGNWLVTAS-RDHL 309 (877)
Q Consensus 232 ~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~-~~h~~~V~~l~~sp~g~~l~s~s-~Dg~ 309 (877)
......+.........|+++|.+.+|+.+.......|..+++... ....+ ...-.....|+|++++..|+.+. ....
T Consensus 109 ~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~ 187 (316)
T 1ijq_A 109 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 187 (316)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECCCCCceEEEEeccCCEEEEEECCCCe
Confidence 433333333445678999999777666655442123888887533 33333 22345678999998776666654 5568
Q ss_pred EEEEEcCCCCcceEEE-ec--CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEe
Q psy13969 310 LKVFDIRNLSSEVQTF-RG--HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCI 368 (877)
Q Consensus 310 I~iwd~~~~~~~~~~~-~~--h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~ 368 (877)
|..+|+... . ...+ .. .......|++. ...++++-...+.|..++..+++.+..+
T Consensus 188 I~~~d~dg~-~-~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 188 ISSIDVNGG-N-RKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEEETTSC-S-CEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEEecCCC-c-eEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 999998752 2 2222 21 22345677774 3447777767788988888776655544
No 271
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.15 E-value=0.00019 Score=84.88 Aligned_cols=190 Identities=9% Similarity=0.059 Sum_probs=118.8
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceE-EEccCCC----------Ce-eEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEe
Q psy13969 171 GLWMVTSDHQGYIKYWQSNMNNVK-TFQGHKE----------SI-RGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVL 238 (877)
Q Consensus 171 ~~~l~sg~~dg~v~iwd~~~~~~~-~~~~h~~----------~V-~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l 238 (877)
+..|++++.++.|+.+|..+.++. .+..... .+ ..+++ .+.+|++++.|+.|..+|..+++.+..+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 445666677888888887654433 3322111 01 12233 3567888889999999999999988776
Q ss_pred ccCC----CCeEE-EEEcCCCCEEEEEec------CCcccEEEEcCCCCceeEEeccCC---------------------
Q psy13969 239 RGHG----ADVKC-VDWHPYKSLIVSGSK------DNQQPVKLWDPKAGQALATLHAHK--------------------- 286 (877)
Q Consensus 239 ~~h~----~~v~~-v~~sp~~~~l~sgs~------dg~~~I~iwd~~~~~~~~~~~~h~--------------------- 286 (877)
.... ..+.+ ..+. +..+++++. ++. |+.||.++++.+.++....
T Consensus 144 ~~~~~~~~~~~~~~P~v~--~~~v~vg~~~~~~~~~g~--v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 219 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVV--KGKVIIGNGGAEYGVRGF--VSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQG 219 (668)
T ss_dssp ECSCTTSSCBCCSCCEEE--TTEEEECCBCTTTCCBCE--EEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCS
T ss_pred ccCCCCCcceecCCCEEE--CCEEEEeCCCCCcCCCCE--EEEEECCCCcEEEEecccCCCCCccccccccccccccCCc
Confidence 5421 11111 1111 345555543 466 9999999999888774210
Q ss_pred ----------CCeeEEEEccCCCeEEEEeCCC-------------------eEEEEEcCCCCcceEEEec--CC------
Q psy13969 287 ----------STVMDLAWNQNGNWLVTASRDH-------------------LLKVFDIRNLSSEVQTFRG--HK------ 329 (877)
Q Consensus 287 ----------~~V~~l~~sp~g~~l~s~s~Dg-------------------~I~iwd~~~~~~~~~~~~~--h~------ 329 (877)
.....++++++..++++++.++ .|..+|.++ .+.+-.+.. |.
T Consensus 220 ~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~t-G~~~W~~~~~~~~~wd~~~ 298 (668)
T 1kv9_A 220 DQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDT-GKLAWHYQVTPGDSWDFTA 298 (668)
T ss_dssp SCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTT-CCEEEEEESSTTCCSCCCC
T ss_pred cceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCC-CceeeEeecCCCccccccC
Confidence 1113478888888888887765 389999988 444444443 22
Q ss_pred -CCeEEEEEcCCCC--cEEEEEeCCCcEEEEEcCCCceeEE
Q psy13969 330 -KEASAVAWHPQHE--GLFSSGGADGSIMFWHVGADKEVGC 367 (877)
Q Consensus 330 -~~v~~i~~~p~~~--~~l~sgs~dg~I~iwd~~~~~~~~~ 367 (877)
..+....+..++. .++++++.++.|+++|..+++.+..
T Consensus 299 ~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~ 339 (668)
T 1kv9_A 299 TQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISA 339 (668)
T ss_dssp CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred CCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecc
Confidence 2222222223443 3688889999999999999988743
No 272
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.14 E-value=7.4e-05 Score=86.64 Aligned_cols=232 Identities=14% Similarity=0.141 Sum_probs=137.1
Q ss_pred EEEEeCCCeEEEEeCCCcceE-EEccCC----CCeeE-EEEcCCCCEEEEEE------CCCcEEEEeccCCeeeEEeccC
Q psy13969 174 MVTSDHQGYIKYWQSNMNNVK-TFQGHK----ESIRG-ISFSPSDSKFATCS------DDGTVRVWDFYRCTEEKVLRGH 241 (877)
Q Consensus 174 l~sg~~dg~v~iwd~~~~~~~-~~~~h~----~~V~~-i~~sp~~~~l~sgs------~Dg~I~iwd~~~~~~~~~l~~h 241 (877)
|++++.|+.|+.+|..+.++. ...... ..+++ ..+. ++ .|++++ .++.|+.+|..+++.+-.+...
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 777888999999997665543 222111 11221 1111 34 555555 3799999999999987766532
Q ss_pred CCC-------------------------------------e-EEEEEcCCCCEEEEEecCC--------------cccEE
Q psy13969 242 GAD-------------------------------------V-KCVDWHPYKSLIVSGSKDN--------------QQPVK 269 (877)
Q Consensus 242 ~~~-------------------------------------v-~~v~~sp~~~~l~sgs~dg--------------~~~I~ 269 (877)
... + ..+++.++..+|+.++.+. ...|.
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 111 0 1345666777777776553 11399
Q ss_pred EEcCCCCceeEEeccCCC---------CeeEEEEc-cCC---CeEEEEeCCCeEEEEEcCCCCcceEEEecCC-------
Q psy13969 270 LWDPKAGQALATLHAHKS---------TVMDLAWN-QNG---NWLVTASRDHLLKVFDIRNLSSEVQTFRGHK------- 329 (877)
Q Consensus 270 iwd~~~~~~~~~~~~h~~---------~V~~l~~s-p~g---~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~------- 329 (877)
.+|.++++.+..++.... ...-+... .++ ..|+.++.++.|+++|.++ .+.+.......
T Consensus 282 Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~lw~~~~~~~~~~~~~ 360 (599)
T 1w6s_A 282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTD-GALVSANKLDDTVNVFKS 360 (599)
T ss_dssp EEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTT-CCEEEEEESSTTCCSEEE
T ss_pred EEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCC-CCEeecccccCCcccccc
Confidence 999999998877754221 11112222 466 4677788999999999887 44443332110
Q ss_pred ------CCe--------------------------EEEEEcCCCCcEEEEE-----------------------------
Q psy13969 330 ------KEA--------------------------SAVAWHPQHEGLFSSG----------------------------- 348 (877)
Q Consensus 330 ------~~v--------------------------~~i~~~p~~~~~l~sg----------------------------- 348 (877)
..+ ..++++|+...+++..
T Consensus 361 ~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 440 (599)
T 1w6s_A 361 VDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYP 440 (599)
T ss_dssp ECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred cccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceecc
Confidence 001 2356666655222211
Q ss_pred ---e------CCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcc
Q psy13969 349 ---G------ADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMR 410 (877)
Q Consensus 349 ---s------~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~ 410 (877)
+ .++.|..||+.+++.+-..... ..+..-.+.-.+.+|++++.|+.|+.||.++.....+
T Consensus 441 ~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~ 509 (599)
T 1w6s_A 441 GPKGDRQNYEGLGQIKAYNAITGDYKWEKMER--FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWK 509 (599)
T ss_dssp CTTSBTTTTBCCEEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCcCCcccCCCcCeEEEEECCCCCEEeEecCC--CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEE
Confidence 1 3467888888888876555211 1222111222456788899999999999987554433
No 273
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.14 E-value=0.0017 Score=71.53 Aligned_cols=208 Identities=12% Similarity=0.021 Sum_probs=132.8
Q ss_pred ccCCEEEEEEcCCCCEEEEE-eCCCeEEEEeCCCc-----ceEEEccCCCCeeEEEEcCCCCEEEEE-ECCCcEEEEecc
Q psy13969 158 HDCAVRHMVWSHNGLWMVTS-DHQGYIKYWQSNMN-----NVKTFQGHKESIRGISFSPSDSKFATC-SDDGTVRVWDFY 230 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l~sg-~~dg~v~iwd~~~~-----~~~~~~~h~~~V~~i~~sp~~~~l~sg-s~Dg~I~iwd~~ 230 (877)
....+..|+|++....|+.+ ...+.|+.++++.. ....+.........|++...+..|+.+ ...+.|.+.++.
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 44578899999866555544 45678888887652 223333344567889998755555444 457899999987
Q ss_pred CCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEe-CCCe
Q psy13969 231 RCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTAS-RDHL 309 (877)
Q Consensus 231 ~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s-~Dg~ 309 (877)
.......+.........|+++|...+|+.+.......|...++........+...-.....|++++++..|+.+. ....
T Consensus 190 g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~ 269 (400)
T 3p5b_L 190 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 269 (400)
T ss_dssp TCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE
Confidence 554444444444567899999977766665533212388898875443333333345778999998777776664 4678
Q ss_pred EEEEEcCCCCcceEEEec--CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEe
Q psy13969 310 LKVFDIRNLSSEVQTFRG--HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCI 368 (877)
Q Consensus 310 I~iwd~~~~~~~~~~~~~--h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~ 368 (877)
|..+|+... ........ .......|++. ...++++-...+.|..+|..+++.+..+
T Consensus 270 I~~~d~dG~-~~~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 270 ISSIDVNGG-NRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp EEEEETTSC-CCEEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESSSCCCCEEE
T ss_pred EEEEeCCCC-ccEEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCCCceEEE
Confidence 999998752 22222222 22345567763 4457777777788999997777766665
No 274
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.12 E-value=0.00073 Score=74.15 Aligned_cols=207 Identities=13% Similarity=0.052 Sum_probs=132.4
Q ss_pred cCCEEEEEEcCCCCEEE-EEeCCCeEEEEeCCCcceEEEcc-CCCCeeEEEEcCCCCEEEEE-ECCCcEEEEeccCCeee
Q psy13969 159 DCAVRHMVWSHNGLWMV-TSDHQGYIKYWQSNMNNVKTFQG-HKESIRGISFSPSDSKFATC-SDDGTVRVWDFYRCTEE 235 (877)
Q Consensus 159 ~~~V~~l~~spd~~~l~-sg~~dg~v~iwd~~~~~~~~~~~-h~~~V~~i~~sp~~~~l~sg-s~Dg~I~iwd~~~~~~~ 235 (877)
...+..|+|.+....|+ +-...+.|+.++.+...+..+.. .......|++.+.+..|+.+ .....|.++++......
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 194 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE
Confidence 35578899997555554 55567889999988766554432 23345678888755555444 45678999888654433
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEE-eCCCeEEEEE
Q psy13969 236 KVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTA-SRDHLLKVFD 314 (877)
Q Consensus 236 ~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~-s~Dg~I~iwd 314 (877)
..+.........|+++|.+.+|+.+.......|..+++........+...-.....|+|++++..|+.+ +..+.|..+|
T Consensus 195 ~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d 274 (386)
T 3v65_B 195 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 274 (386)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEEC
T ss_pred EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEe
Confidence 334434456789999997776666554432238888876544333333334457899999866655555 4567799999
Q ss_pred cCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEe
Q psy13969 315 IRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCI 368 (877)
Q Consensus 315 ~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~ 368 (877)
+.. ......+.........|++. ...++++-...+.|..+|..+++.+..+
T Consensus 275 ~dG-~~~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 275 LDG-SHRKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGKNQEII 325 (386)
T ss_dssp TTS-CSCEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCC-CeeEEEEECCCCCceEEEEE--CCEEEEeeCCCCeEEEEECCCCcceEEE
Confidence 875 22223333334456778873 3347777767788888886666655555
No 275
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.11 E-value=0.0012 Score=70.08 Aligned_cols=220 Identities=6% Similarity=0.025 Sum_probs=135.4
Q ss_pred CCeEEEEeCCCcc--eEEEccCCCCeeEEEEcCCCCEEEEEE-CCCcEEEEeccCCee-eEEeccCCCCeEEEEEcCCCC
Q psy13969 180 QGYIKYWQSNMNN--VKTFQGHKESIRGISFSPSDSKFATCS-DDGTVRVWDFYRCTE-EKVLRGHGADVKCVDWHPYKS 255 (877)
Q Consensus 180 dg~v~iwd~~~~~--~~~~~~h~~~V~~i~~sp~~~~l~sgs-~Dg~I~iwd~~~~~~-~~~l~~h~~~v~~v~~sp~~~ 255 (877)
...|+.++++... ...+......+.+|+|++....|+.+. ..+.|..+++..... ...+.........+++.+.+.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 4568888876642 222222223466899998655555554 567899999876532 222222334567888887555
Q ss_pred EEEEE-ecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeC--CCeEEEEEcCCCCcceEEEecCCCCe
Q psy13969 256 LIVSG-SKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASR--DHLLKVFDIRNLSSEVQTFRGHKKEA 332 (877)
Q Consensus 256 ~l~sg-s~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~--Dg~I~iwd~~~~~~~~~~~~~h~~~v 332 (877)
.|+.+ ...+. |.++++........+.........|++++.+.+|+.+.. ...|..+++... .........-...
T Consensus 92 ~ly~~d~~~~~--I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~l~~P 168 (318)
T 3sov_A 92 KLYWTDSETNR--IEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFIIINSEIYWP 168 (318)
T ss_dssp EEEEEETTTTE--EEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSCE
T ss_pred eEEEEECCCCE--EEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC-CeEEEEECCCCCc
Confidence 55444 44455 999998754433333344556789999987666666653 577888887642 2222222223456
Q ss_pred EEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 333 SAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 333 ~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
+.|+|++++..++++=+..+.|..+|+........+ .........+++.. +.++++-...+.|..++..+
T Consensus 169 nglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~-~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~ 238 (318)
T 3sov_A 169 NGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV-KGSLPHPFALTLFE-DILYWTDWSTHSILACNKYT 238 (318)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTT
T ss_pred cEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEe-cCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCC
Confidence 899999988777777777789999998653332222 22344567777753 34555555567788888754
No 276
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.10 E-value=0.0022 Score=76.63 Aligned_cols=225 Identities=7% Similarity=-0.026 Sum_probs=139.2
Q ss_pred EEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEE-CCCcEEEEeccCC----eeeEEeccCCCCeEE
Q psy13969 173 WMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCS-DDGTVRVWDFYRC----TEEKVLRGHGADVKC 247 (877)
Q Consensus 173 ~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs-~Dg~I~iwd~~~~----~~~~~l~~h~~~v~~ 247 (877)
+|+.+. ...|+..+++......+......+..|+|+....+|+.+. ..+.|+.+++... .....+.........
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~G 475 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 475 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred cccccc-ccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcce
Confidence 444333 4567777777666666655667788999998666655554 4678998988642 223334434456778
Q ss_pred EEEcCCCCEEEEEec-CCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeC-C-CeEEEEEcCCCCcceEE
Q psy13969 248 VDWHPYKSLIVSGSK-DNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASR-D-HLLKVFDIRNLSSEVQT 324 (877)
Q Consensus 248 v~~sp~~~~l~sgs~-dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~-D-g~I~iwd~~~~~~~~~~ 324 (877)
|++...+..|+.+.. .+. |.+.++........+.........|++++...+|+.+.. + ..|.+.++.. ......
T Consensus 476 LAvD~~~~~LY~tD~~~~~--I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG-~~~~~l 552 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGT--VSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSL 552 (791)
T ss_dssp EEEETTTTEEEEEETTTTE--EEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEE
T ss_pred eeeeecCCcEEEEecCCCe--EEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC-CceEEE
Confidence 999887765555544 444 999998755443333334456889999997666666653 2 6788888865 222223
Q ss_pred EecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecC-cCCCCEEEEEEcCCCCEEEEEE-cCCeEEEEeC
Q psy13969 325 FRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ-AHDNIIWTMAWHPLGHILATGS-NDHASKFWTR 402 (877)
Q Consensus 325 ~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~h~~~V~~v~~sp~g~~l~sg~-~dg~v~iwd~ 402 (877)
+...-...+.|++++....|+++=.....|.++++........+.. ..-....+|++..+ .|+.+. ..+.|...+.
T Consensus 553 v~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~--~lYwtD~~~~~I~~~dk 630 (791)
T 3m0c_C 553 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANR 630 (791)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT--EEEEEETTTTEEEEEET
T ss_pred EeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC--EEEEEECCCCEEEEEeC
Confidence 3333457889999988776777766677899999865444333311 12234556776433 444444 4556666664
Q ss_pred C
Q psy13969 403 N 403 (877)
Q Consensus 403 ~ 403 (877)
.
T Consensus 631 ~ 631 (791)
T 3m0c_C 631 L 631 (791)
T ss_dssp T
T ss_pred C
Confidence 3
No 277
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.10 E-value=0.00098 Score=74.53 Aligned_cols=238 Identities=12% Similarity=0.111 Sum_probs=140.5
Q ss_pred CEEEEEEcC-CC-CEEEEEeCCCeEEEEeCCCcceEEEccC----CCCeeEEEE-------cCCCCEEEEEECCC-----
Q psy13969 161 AVRHMVWSH-NG-LWMVTSDHQGYIKYWQSNMNNVKTFQGH----KESIRGISF-------SPSDSKFATCSDDG----- 222 (877)
Q Consensus 161 ~V~~l~~sp-d~-~~l~sg~~dg~v~iwd~~~~~~~~~~~h----~~~V~~i~~-------sp~~~~l~sgs~Dg----- 222 (877)
....|+|+| +. +++++......|++.|.+...+..+..- ......|+| ++++.+|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 467899998 34 4444555557788899888777766432 235789999 99998777766554
Q ss_pred --cEEEEeccC-Ceee-----EEeccCCCCeEEEEEcCCCCE-EEEEecCCcccEEEEcCC-------CCce--------
Q psy13969 223 --TVRVWDFYR-CTEE-----KVLRGHGADVKCVDWHPYKSL-IVSGSKDNQQPVKLWDPK-------AGQA-------- 278 (877)
Q Consensus 223 --~I~iwd~~~-~~~~-----~~l~~h~~~v~~v~~sp~~~~-l~sgs~dg~~~I~iwd~~-------~~~~-------- 278 (877)
.|.+++... +... ..+.. ......++++++..+ +++-..++. |+.+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~--V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQ--VFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTE--EEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred CceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCE--EEEEecccccccccCceeeccccccc
Confidence 266665333 1221 12221 123457788995554 455555565 9999987 4543
Q ss_pred ---eEEe-c-cCCCCeeEEEEccCCCeEEEE-eCCCeEEEEEcCCCCcce---EEEecC---C------------CCeE-
Q psy13969 279 ---LATL-H-AHKSTVMDLAWNQNGNWLVTA-SRDHLLKVFDIRNLSSEV---QTFRGH---K------------KEAS- 333 (877)
Q Consensus 279 ---~~~~-~-~h~~~V~~l~~sp~g~~l~s~-s~Dg~I~iwd~~~~~~~~---~~~~~h---~------------~~v~- 333 (877)
...+ . .....-+.|+|++++++|+.+ +....|+.+|.......+ .++.+. . ....
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~ 376 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQ 376 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEE
T ss_pred ccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeE
Confidence 1122 1 223456899999999965444 566788887764321111 222221 0 1233
Q ss_pred EEEEc-------CCCCcEEEEEeCCCcEEEEEcCCCceeEEec-C------------c----------CCCCEEEEEEcC
Q psy13969 334 AVAWH-------PQHEGLFSSGGADGSIMFWHVGADKEVGCIP-Q------------A----------HDNIIWTMAWHP 383 (877)
Q Consensus 334 ~i~~~-------p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~-~------------~----------h~~~V~~v~~sp 383 (877)
.++.. .++. |+++=.....|+.++. ++. +.++. . . .-...+.|++++
T Consensus 377 gv~vd~~~~~~~~~g~-lyVaD~~N~rIr~i~~-~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~ 453 (496)
T 3kya_A 377 GVFVKNPDYTGEEEYD-FYFVDRLNFCVRKVTP-EGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDD 453 (496)
T ss_dssp EEEEECTTCCSSCCEE-EEEEEGGGTEEEEECT-TCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEET
T ss_pred EEEEccccccccCCCe-EEEEECCCCEEEEEeC-CCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEEC
Confidence 34443 2333 6666666778998884 443 33321 0 0 112467899998
Q ss_pred C-CCEEEEEEcCCeEEEEeCCC
Q psy13969 384 L-GHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 384 ~-g~~l~sg~~dg~v~iwd~~~ 404 (877)
+ +.++++=.....|+.+++..
T Consensus 454 ~~g~lyVaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 454 VKEMFYVHDQVGHTIRTISMEQ 475 (496)
T ss_dssp TTTEEEEEETTTTEEEEEEECC
T ss_pred CCCEEEEEeCCCCEEEEEECCC
Confidence 6 66555555667888888754
No 278
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.09 E-value=0.0072 Score=64.43 Aligned_cols=269 Identities=10% Similarity=0.081 Sum_probs=141.2
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ceEEEc----cCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCee
Q psy13969 160 CAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NVKTFQ----GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTE 234 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~~~~~----~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~ 234 (877)
..+.+|.|..++..+++ +..+.|... .+.. .-..+. .....+.+|.|++ +. +++++.++.|.. ....++.
T Consensus 36 ~~~~~v~~~~~~~~~~~-G~~g~i~~s-~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~DgG~t 110 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLV-GVNATLMET-RDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-GWIVGEPPIMLH-TTDGGQS 110 (327)
T ss_dssp SCEEEEEESSSSCEEEE-ETTTEEEEE-SSTTSSCEECCCCCSCCCCEEEEEEEET-TE-EEEEEETTEEEE-ESSTTSS
T ss_pred CcEEEEEECCCCcEEEE-cCCCeEEEe-CCCCCCCeECCCCCCCCCccEEEEEecC-Ce-EEEEECCCeEEE-ECCCCCC
Confidence 46888888877777774 456665333 3322 111111 2244688999975 43 444555665544 2222332
Q ss_pred eEEec---cCCCCeEEEEEcCCCCEEEEEecCCcccEE-EEcCCCCceeEEe-ccCCCCeeEEEEccCCCeEEEEeCCCe
Q psy13969 235 EKVLR---GHGADVKCVDWHPYKSLIVSGSKDNQQPVK-LWDPKAGQALATL-HAHKSTVMDLAWNQNGNWLVTASRDHL 309 (877)
Q Consensus 235 ~~~l~---~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~-iwd~~~~~~~~~~-~~h~~~V~~l~~sp~g~~l~s~s~Dg~ 309 (877)
-..+. .+...+..|.+..++.+++++ .++. |+ -.| .++.-..+ ..+...+.++++++++.+++++.....
T Consensus 111 W~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~--v~~S~D--gG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~ 185 (327)
T 2xbg_A 111 WSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGA--IYRTKD--SGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSF 185 (327)
T ss_dssp CEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCC--EEEESS--TTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSE
T ss_pred ceECccccCCCCCeEEEEEECCCCEEEEe-CCcc--EEEEcC--CCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcE
Confidence 22221 233457788877666655554 4554 43 333 23222222 344567899999998887776654444
Q ss_pred EEEEEc-CCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCc---CCCCEEEEEEcCCC
Q psy13969 310 LKVFDI-RNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQA---HDNIIWTMAWHPLG 385 (877)
Q Consensus 310 I~iwd~-~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~---h~~~V~~v~~sp~g 385 (877)
++-+|- -.....+ .......+..+++.+++. ++ .++.++.|++++...++....+... +...+.+|+|.+++
T Consensus 186 ~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~-~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~ 261 (327)
T 2xbg_A 186 YSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGR-LW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPN 261 (327)
T ss_dssp EEEECTTCSSCEEE--ECCSSSCEEEEEECTTSC-EE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSS
T ss_pred EEEeCCCCCceeEC--CCCCCCccceeEECCCCC-EE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCC
Confidence 444443 1111222 223456788999988876 44 4456788877653333333333111 23458999999887
Q ss_pred CEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeec
Q psy13969 386 HILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVF 450 (877)
Q Consensus 386 ~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~ 450 (877)
.+++++. ++.| ++..+. +........... ....++++.|..+...++. +.++.+..+
T Consensus 262 ~~~~~g~-~g~i-~~S~Dg-G~tW~~~~~~~~---~~~~~~~v~~~~~~~~~~~--G~~G~i~~~ 318 (327)
T 2xbg_A 262 EVWLAGG-AGAL-LCSQDG-GQTWQQDVDVKK---VPSNFYKILFFSPDQGFIL--GQKGILLRY 318 (327)
T ss_dssp CEEEEES-TTCE-EEESST-TSSCEECGGGTT---SSSCCCEEEEEETTEEEEE--CSTTEEEEE
T ss_pred EEEEEeC-CCeE-EEeCCC-CcccEEcCccCC---CCCCeEEEEEECCCceEEE--cCCceEEEE
Confidence 7666654 6666 333332 223222111100 1123455666544444444 345555544
No 279
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.09 E-value=0.0012 Score=71.32 Aligned_cols=205 Identities=14% Similarity=0.067 Sum_probs=129.5
Q ss_pred CCEEEEEEcCCCCEEE-EEeCCCeEEEEeCCCcceEEEc-cCCCCeeEEEEcCCCCEE-EEEECCCcEEEEeccCCeeeE
Q psy13969 160 CAVRHMVWSHNGLWMV-TSDHQGYIKYWQSNMNNVKTFQ-GHKESIRGISFSPSDSKF-ATCSDDGTVRVWDFYRCTEEK 236 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~-sg~~dg~v~iwd~~~~~~~~~~-~h~~~V~~i~~sp~~~~l-~sgs~Dg~I~iwd~~~~~~~~ 236 (877)
..+..|+|++....|+ +-...+.|+.++.+......+. ........|++.+.+..| ++-...+.|.++++.......
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 152 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 152 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE
Confidence 4578899997655555 4456788999998876554443 233456788998755555 444456789999986544333
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEe-ccCCCCeeEEEEccCCCeEEEEe-CCCeEEEEE
Q psy13969 237 VLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATL-HAHKSTVMDLAWNQNGNWLVTAS-RDHLLKVFD 314 (877)
Q Consensus 237 ~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~-~~h~~~V~~l~~sp~g~~l~s~s-~Dg~I~iwd 314 (877)
.+.........|+++|.+.+|+.+.......|..+++.... ...+ ...-.....|+|++++..|+.+. ..+.|..+|
T Consensus 153 l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 153 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 231 (349)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEe
Confidence 34334456789999997766665554431238888876433 3333 22344578899998666665554 567899999
Q ss_pred cCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEe
Q psy13969 315 IRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCI 368 (877)
Q Consensus 315 ~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~ 368 (877)
+.. ......+.........|++. ...++++-...+.|..++..+++.+..+
T Consensus 232 ~dG-~~~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 232 LDG-SHRKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp TTS-CSCEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCC-CceEEEEeCCCCCceEEEEE--CCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 875 22222333334456777773 3347777666778888886666555544
No 280
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.08 E-value=0.00041 Score=77.30 Aligned_cols=156 Identities=12% Similarity=0.106 Sum_probs=101.7
Q ss_pred CeeEEEEcC-CCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCC---cccEEEEcCCCCc
Q psy13969 202 SIRGISFSP-SDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDN---QQPVKLWDPKAGQ 277 (877)
Q Consensus 202 ~V~~i~~sp-~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg---~~~I~iwd~~~~~ 277 (877)
....|+|+| +...|+++.....|+++|+......... ........|+|++++++|+++...+ ...+.+++.. +.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cc
Confidence 356889998 4566777766688999998765544433 3556688999999999666665421 1114444432 22
Q ss_pred ee--EEeccCCCCeeEEEEcc-CCCeEEEEeCCCeEEEEEcCCCCcceEEEec-CCCCeEEEEEcCCCCcEEEEEeCCCc
Q psy13969 278 AL--ATLHAHKSTVMDLAWNQ-NGNWLVTASRDHLLKVFDIRNLSSEVQTFRG-HKKEASAVAWHPQHEGLFSSGGADGS 353 (877)
Q Consensus 278 ~~--~~~~~h~~~V~~l~~sp-~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~-h~~~v~~i~~~p~~~~~l~sgs~dg~ 353 (877)
.. ..+.. ......+++++ ++.++++-..++.|..||.... ........ .......|+|++++..++++-...+.
T Consensus 216 ~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~-~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 216 FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ-ETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTT-EEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC-cEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 11 22322 34567889999 6666666667788999998752 22122221 22457789999999867777777889
Q ss_pred EEEEEcCC
Q psy13969 354 IMFWHVGA 361 (877)
Q Consensus 354 I~iwd~~~ 361 (877)
|.+++...
T Consensus 294 I~~~~~d~ 301 (430)
T 3tc9_A 294 ILRSDYDW 301 (430)
T ss_dssp EEEEEEET
T ss_pred EEEEeCCc
Confidence 99988753
No 281
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.05 E-value=0.00024 Score=82.26 Aligned_cols=179 Identities=13% Similarity=0.048 Sum_probs=108.9
Q ss_pred EEEcCCCCEEEEEECC----------------CcEEEEeccCCeeeEEeccCCC------CeEE---EEEcCCCC---EE
Q psy13969 206 ISFSPSDSKFATCSDD----------------GTVRVWDFYRCTEEKVLRGHGA------DVKC---VDWHPYKS---LI 257 (877)
Q Consensus 206 i~~sp~~~~l~sgs~D----------------g~I~iwd~~~~~~~~~l~~h~~------~v~~---v~~sp~~~---~l 257 (877)
+++.++..+|+.++.+ +.|..+|..+++.+..+..... .+.+ +....+++ ++
T Consensus 240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v 319 (571)
T 2ad6_A 240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLL 319 (571)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEE
T ss_pred EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEE
Confidence 5666666677766532 3599999999998877653211 1111 22223563 56
Q ss_pred EEEecCCcccEEEEcCCCCceeEEeccCC-------------CCe--------------------------eEEEEccCC
Q psy13969 258 VSGSKDNQQPVKLWDPKAGQALATLHAHK-------------STV--------------------------MDLAWNQNG 298 (877)
Q Consensus 258 ~sgs~dg~~~I~iwd~~~~~~~~~~~~h~-------------~~V--------------------------~~l~~sp~g 298 (877)
++++.++. |+++|..+++.+..+.... .+| ..++|+|+.
T Consensus 320 ~~~~~~G~--l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 397 (571)
T 2ad6_A 320 SHIDRNGI--LYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES 397 (571)
T ss_dssp EEECTTSE--EEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEeCCCcE--EEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence 77888888 9999999999877654221 111 245778877
Q ss_pred CeEEEEe-------------------------------------CCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCC
Q psy13969 299 NWLVTAS-------------------------------------RDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQH 341 (877)
Q Consensus 299 ~~l~s~s-------------------------------------~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~ 341 (877)
.+|++.+ .++.|..||+.+ .+.+-.+.. ...+....+...+
T Consensus 398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~t-G~~~W~~~~-~~~~~~~~~~t~g 475 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTT-GKAKWTKWE-KFAAWGGTLYTKG 475 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTT-CCEEEEEEE-SSCCCSBCEEETT
T ss_pred CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCC-CCEEEEecC-CCCccceeEEECC
Confidence 7776654 246788899887 344444332 2222222222234
Q ss_pred CcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEE
Q psy13969 342 EGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILA 389 (877)
Q Consensus 342 ~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~ 389 (877)
. ++++++.|+.|++||.++++.+..+...+...-.-+.+..++++++
T Consensus 476 g-~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 476 G-LVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp T-EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred C-EEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence 4 5666889999999999999998877433322112233445665433
No 282
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.99 E-value=0.00067 Score=75.58 Aligned_cols=198 Identities=13% Similarity=0.073 Sum_probs=119.9
Q ss_pred CeeEEEEcCC--CCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCC---cccEEEEcCCCC
Q psy13969 202 SIRGISFSPS--DSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDN---QQPVKLWDPKAG 276 (877)
Q Consensus 202 ~V~~i~~sp~--~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg---~~~I~iwd~~~~ 276 (877)
....|+|+++ ...|+.+...+.|+.+|+.++..... .........|+|+++++ |+++...+ ...+..++....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~-~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIK-TTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEE-CCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEe-ecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 3568999984 45566665558999999877665444 33556689999999999 44444321 111444443322
Q ss_pred ce-eEEeccCCCCeeEEEEcc-CCCeEEEEeCCCeEEEEEcCCCCcceEEEec-CCCCeEEEEEcCCCCcEEEEEeCCCc
Q psy13969 277 QA-LATLHAHKSTVMDLAWNQ-NGNWLVTASRDHLLKVFDIRNLSSEVQTFRG-HKKEASAVAWHPQHEGLFSSGGADGS 353 (877)
Q Consensus 277 ~~-~~~~~~h~~~V~~l~~sp-~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~-h~~~v~~i~~~p~~~~~l~sgs~dg~ 353 (877)
.. ...+. .......+++++ ++.++++-..++.|+.+|..+.......+.. .......|+|++++..++++-...+.
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 11 11221 234567788999 6666666667788999998752221122221 12233569999999867777777789
Q ss_pred EEEEEcCC--Cce--eEEecC--------------cCCCCEEEEEE---------cCCCCEEEEEEcCCeEEEEeC
Q psy13969 354 IMFWHVGA--DKE--VGCIPQ--------------AHDNIIWTMAW---------HPLGHILATGSNDHASKFWTR 402 (877)
Q Consensus 354 I~iwd~~~--~~~--~~~~~~--------------~h~~~V~~v~~---------sp~g~~l~sg~~dg~v~iwd~ 402 (877)
|+.+++.. ... ...+.. ..-.....+++ ..++.++++-...+.|+.++.
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 99988753 211 111100 01124677999 667776666666778888874
No 283
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.98 E-value=0.0028 Score=67.27 Aligned_cols=203 Identities=9% Similarity=0.030 Sum_probs=127.0
Q ss_pred CEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCcc--eEEEccCCCCeeEEEEcCCCCEEE-EEECCCcEEEEeccCCeeeE
Q psy13969 161 AVRHMVWSHNGLWM-VTSDHQGYIKYWQSNMNN--VKTFQGHKESIRGISFSPSDSKFA-TCSDDGTVRVWDFYRCTEEK 236 (877)
Q Consensus 161 ~V~~l~~spd~~~l-~sg~~dg~v~iwd~~~~~--~~~~~~h~~~V~~i~~sp~~~~l~-sgs~Dg~I~iwd~~~~~~~~ 236 (877)
.+..|.|.+....| ++-...+.|+.++.+... ...+...-.....|++.+.+..|+ +-...+.|.++++.......
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 46678888854444 455567788889877653 222222234566888887555544 44456799999986543333
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEec--CCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEe-CCCeEEEE
Q psy13969 237 VLRGHGADVKCVDWHPYKSLIVSGSK--DNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTAS-RDHLLKVF 313 (877)
Q Consensus 237 ~l~~h~~~v~~v~~sp~~~~l~sgs~--dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s-~Dg~I~iw 313 (877)
.+.........|+++|.+.+|+.+.. ... |..+++........+...-..-..|+|++++..|+.+. ....|..+
T Consensus 116 l~~~~~~~P~giavdp~~g~ly~td~~~~~~--I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~ 193 (318)
T 3sov_A 116 LFWQELDQPRAIALDPSSGFMYWTDWGEVPK--IERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKS 193 (318)
T ss_dssp EECSSCSSEEEEEEEGGGTEEEEEECSSSCE--EEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEeCCCCCccEEEEeCCCCEEEEEecCCCCE--EEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEE
Confidence 33344556789999987776666653 344 88888764332222223334568899999766666654 56789999
Q ss_pred EcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEe
Q psy13969 314 DIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCI 368 (877)
Q Consensus 314 d~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~ 368 (877)
|+... .....+.........|++. ...++++-...+.|..++..+++.+..+
T Consensus 194 d~dG~-~~~~~~~~~~~~P~glav~--~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 194 NLDGT-NRQAVVKGSLPHPFALTLF--EDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp ETTSC-SCEEEECSCCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred cCCCC-ceEEEecCCCCCceEEEEe--CCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 98752 2222223234456677775 3447777666788999998777665554
No 284
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.97 E-value=0.0082 Score=64.01 Aligned_cols=229 Identities=8% Similarity=0.051 Sum_probs=128.2
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-cceEEEc---cCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCee
Q psy13969 159 DCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNM-NNVKTFQ---GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTE 234 (877)
Q Consensus 159 ~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~-~~~~~~~---~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~ 234 (877)
...+.+|.|++ +..++ ++..+.|+.- .+. ..-..+. .+...+..|.+..++..+++ +.++.|..- ...++.
T Consensus 79 ~~~~~~i~~~~-~~~~~-~g~~g~i~~S-~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~g~v~~S-~DgG~t 153 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWI-VGEPPIMLHT-TDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMI-TNVGAIYRT-KDSGKN 153 (327)
T ss_dssp CCEEEEEEEET-TEEEE-EEETTEEEEE-SSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEE-ETTCCEEEE-SSTTSS
T ss_pred CccEEEEEecC-CeEEE-EECCCeEEEE-CCCCCCceECccccCCCCCeEEEEEECCCCEEEE-eCCccEEEE-cCCCCC
Confidence 34688899975 44444 4455655443 222 2222211 23355778888766655554 456654331 122322
Q ss_pred -eEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcC--CCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEE
Q psy13969 235 -EKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDP--KAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLK 311 (877)
Q Consensus 235 -~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~--~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~ 311 (877)
......+...+.++++++++.+++++. ++. .++.+|- .+.+.+. ......+..+.+++++.++ +++.++.|+
T Consensus 154 W~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~-~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~ 228 (327)
T 2xbg_A 154 WQALVQEAIGVMRNLNRSPSGEYVAVSS-RGS-FYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIA 228 (327)
T ss_dssp EEEEECSCCCCEEEEEECTTSCEEEEET-TSS-EEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEE
T ss_pred CEEeecCCCcceEEEEEcCCCcEEEEEC-CCc-EEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEE
Confidence 222234556789999999888776664 443 1344453 3333332 2345678899999887655 556678877
Q ss_pred EEEcCCCCcceEEEe----cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecC--cCCCCEEEEEEcCCC
Q psy13969 312 VFDIRNLSSEVQTFR----GHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ--AHDNIIWTMAWHPLG 385 (877)
Q Consensus 312 iwd~~~~~~~~~~~~----~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~--~h~~~V~~v~~sp~g 385 (877)
+++... ......+. .+...+.+|++.+++. +++++ .++.| ++..+.++....+.. .+...+.+|+|..++
T Consensus 229 ~s~~D~-G~tW~~~~~~~~~~~~~~~~v~~~~~~~-~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~ 304 (327)
T 2xbg_A 229 FSDPDN-SENWGELLSPLRRNSVGFLDLAYRTPNE-VWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD 304 (327)
T ss_dssp EEETTE-EEEECCCBCTTSSCCSCEEEEEESSSSC-EEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT
T ss_pred EecCCC-CCeeEeccCCcccCCcceEEEEecCCCE-EEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC
Confidence 764221 11111111 1223588899988765 55554 46766 455555655544421 233567889887544
Q ss_pred CEEEEEEcCCeEEEEeC
Q psy13969 386 HILATGSNDHASKFWTR 402 (877)
Q Consensus 386 ~~l~sg~~dg~v~iwd~ 402 (877)
.+++++.+|.|..++-
T Consensus 305 -~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 305 -QGFILGQKGILLRYVT 320 (327)
T ss_dssp -EEEEECSTTEEEEECC
T ss_pred -ceEEEcCCceEEEEcC
Confidence 4666778998777664
No 285
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.96 E-value=0.0022 Score=76.63 Aligned_cols=208 Identities=11% Similarity=0.024 Sum_probs=130.3
Q ss_pred ccCCEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCc-----ceEEEccCCCCeeEEEEcCCCCEEEEE-ECCCcEEEEecc
Q psy13969 158 HDCAVRHMVWSHNGLWM-VTSDHQGYIKYWQSNMN-----NVKTFQGHKESIRGISFSPSDSKFATC-SDDGTVRVWDFY 230 (877)
Q Consensus 158 h~~~V~~l~~spd~~~l-~sg~~dg~v~iwd~~~~-----~~~~~~~h~~~V~~i~~sp~~~~l~sg-s~Dg~I~iwd~~ 230 (877)
....+..|+|......| ++-...+.|+.++++.. ....+.........|++...+..|+.+ ...+.|.+.++.
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 44567889999855544 45555678888887652 233333344566789998777555555 457899999986
Q ss_pred CCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEe-CCCe
Q psy13969 231 RCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTAS-RDHL 309 (877)
Q Consensus 231 ~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s-~Dg~ 309 (877)
.......+.........|++++...+|+.+.......|...++........+...-.....|++++....|+++. ....
T Consensus 502 G~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~ 581 (791)
T 3m0c_C 502 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 581 (791)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc
Confidence 544444444444568899999987777666543212388888875444334443446788999998766666664 4567
Q ss_pred EEEEEcCCCCcceEEEec--CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEe
Q psy13969 310 LKVFDIRNLSSEVQTFRG--HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCI 368 (877)
Q Consensus 310 I~iwd~~~~~~~~~~~~~--h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~ 368 (877)
|..+|+... .....+.. .-.....|++. ...|+++-...+.|...|..+++.+..+
T Consensus 582 I~~~d~dG~-~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 582 ISSIDVNGG-NRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEEEETTSC-SCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEEecCCC-ceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 999998652 22222222 12234566664 3346776666678888887776655554
No 286
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.90 E-value=0.0022 Score=67.13 Aligned_cols=196 Identities=10% Similarity=0.130 Sum_probs=123.2
Q ss_pred EEEEEcC-CCCEEEEEeCCCeEEEEeCCCcceEEE-ccC-----C--CCeeEEEE---cCCCCEEEEEEC----------
Q psy13969 163 RHMVWSH-NGLWMVTSDHQGYIKYWQSNMNNVKTF-QGH-----K--ESIRGISF---SPSDSKFATCSD---------- 220 (877)
Q Consensus 163 ~~l~~sp-d~~~l~sg~~dg~v~iwd~~~~~~~~~-~~h-----~--~~V~~i~~---sp~~~~l~sgs~---------- 220 (877)
-+++|.. ++.++++.-..++|..|+.....+..+ ..+ . ..+..|.| .++++++++...
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 3567766 445555555899999999875543333 111 1 13579999 578766665442
Q ss_pred ---CCcEEEEecc---CCeeeEEec--c-----------CCCCeEEEEEcCCCCEEEEEecC-CcccEEEEcCCCCceeE
Q psy13969 221 ---DGTVRVWDFY---RCTEEKVLR--G-----------HGADVKCVDWHPYKSLIVSGSKD-NQQPVKLWDPKAGQALA 280 (877)
Q Consensus 221 ---Dg~I~iwd~~---~~~~~~~l~--~-----------h~~~v~~v~~sp~~~~l~sgs~d-g~~~I~iwd~~~~~~~~ 280 (877)
+..|..||+. +++.+.... . .......++..++++..++.+.- +. |..++..... +.
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~--I~rV~pdG~~-~~ 172 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPA--IARVSADGKT-VS 172 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCE--EEEECTTSCC-EE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCe--EEEEeCCCCE-Ee
Confidence 5789999998 676655443 1 11247899999999999988888 77 8888876442 33
Q ss_pred Eecc------CCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEe--cC---CCCeEEE-EEcCCCCcEEEEE
Q psy13969 281 TLHA------HKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFR--GH---KKEASAV-AWHPQHEGLFSSG 348 (877)
Q Consensus 281 ~~~~------h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~--~h---~~~v~~i-~~~p~~~~~l~sg 348 (877)
.+.. .....+.|+++|++++|++...++.|..+|++........+. +. -.....| ..-.++..++++.
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~ 252 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGA 252 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEE
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEc
Confidence 2211 122367899999999999987799999999885322001111 21 1122332 3334555446666
Q ss_pred eCCCcEEEEEcCC
Q psy13969 349 GADGSIMFWHVGA 361 (877)
Q Consensus 349 s~dg~I~iwd~~~ 361 (877)
+..+.+.+.+...
T Consensus 253 ~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 253 RAPYAISFRSWDN 265 (334)
T ss_dssp ETTEEEEEECSST
T ss_pred CCCCEEEEECCCC
Confidence 6666666665544
No 287
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.90 E-value=0.0023 Score=74.11 Aligned_cols=193 Identities=11% Similarity=0.056 Sum_probs=115.7
Q ss_pred CCEEEEEeC-CCeEEEEeC-CCcceE-EEccCCC-----------CeeEEEEcCCCCE----EEEEECCCcEEEEeccCC
Q psy13969 171 GLWMVTSDH-QGYIKYWQS-NMNNVK-TFQGHKE-----------SIRGISFSPSDSK----FATCSDDGTVRVWDFYRC 232 (877)
Q Consensus 171 ~~~l~sg~~-dg~v~iwd~-~~~~~~-~~~~h~~-----------~V~~i~~sp~~~~----l~sgs~Dg~I~iwd~~~~ 232 (877)
+..|++++. ++.|+.+|. .+.++. .+..... ....++++|.+.. |++++.|+.|..+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 344555555 677777777 554432 2221111 1123555433333 888889999999999999
Q ss_pred eeeEEeccCC----CCeEE-EEEcCCCCEEEEEe------cCCcccEEEEcCCCCceeEEeccCCCC-------------
Q psy13969 233 TEEKVLRGHG----ADVKC-VDWHPYKSLIVSGS------KDNQQPVKLWDPKAGQALATLHAHKST------------- 288 (877)
Q Consensus 233 ~~~~~l~~h~----~~v~~-v~~sp~~~~l~sgs------~dg~~~I~iwd~~~~~~~~~~~~h~~~------------- 288 (877)
+.+....... ..+.+ ..+. + ..|++++ .++. |+.+|.++++.+.++......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~-g~V~vg~~g~e~g~~g~--v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~ 217 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-K-DKVIIGSSGAELGVRGY--LTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN 217 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-T-TEEEECCBCGGGTCCCE--EEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred CEEEeecCCCCCccceeecCCEEE-C-CEEEEEecccccCCCCe--EEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence 8877654322 12221 1111 3 3455554 3677 999999999988776532111
Q ss_pred ------------------------e-eEEEEccCCCeEEEEeCC----------------CeEEEEEcCCCCcceEEEec
Q psy13969 289 ------------------------V-MDLAWNQNGNWLVTASRD----------------HLLKVFDIRNLSSEVQTFRG 327 (877)
Q Consensus 289 ------------------------V-~~l~~sp~g~~l~s~s~D----------------g~I~iwd~~~~~~~~~~~~~ 327 (877)
+ ..+++.++..+|+.++.+ .+|..+|.++ .+.+-.+..
T Consensus 218 ~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~T-G~~~W~~q~ 296 (599)
T 1w6s_A 218 PHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADT-GEAKFGYQK 296 (599)
T ss_dssp GGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTT-CCEEEEEES
T ss_pred ccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCC-CceeeEeec
Confidence 0 135666777777777665 3789999988 444444443
Q ss_pred --CCC-------CeEEEEEc-CCCC--cEEEEEeCCCcEEEEEcCCCceeEEe
Q psy13969 328 --HKK-------EASAVAWH-PQHE--GLFSSGGADGSIMFWHVGADKEVGCI 368 (877)
Q Consensus 328 --h~~-------~v~~i~~~-p~~~--~~l~sgs~dg~I~iwd~~~~~~~~~~ 368 (877)
|.. ...-+... .++. .+++.++.++.|+++|..+++.+...
T Consensus 297 ~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 297 TPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp STTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecc
Confidence 211 11112222 3453 37778889999999999999887654
No 288
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.90 E-value=0.0011 Score=76.72 Aligned_cols=235 Identities=13% Similarity=0.090 Sum_probs=138.4
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceE-EEccCC----CCee-E-EEEcC--CCC-EEEEEEC------CCcEEEEeccCCee
Q psy13969 171 GLWMVTSDHQGYIKYWQSNMNNVK-TFQGHK----ESIR-G-ISFSP--SDS-KFATCSD------DGTVRVWDFYRCTE 234 (877)
Q Consensus 171 ~~~l~sg~~dg~v~iwd~~~~~~~-~~~~h~----~~V~-~-i~~sp--~~~-~l~sgs~------Dg~I~iwd~~~~~~ 234 (877)
+..|+.++.++.|+.+|..+.++. .+.... ..+. + +.... +++ .|++++. ++.|+.+|..+++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 456777888999999998765543 222211 0111 1 11211 223 5666543 78999999999887
Q ss_pred eEEeccCCCCe-----------------------------------------EEEEEcCCCCEEEEEec-----------
Q psy13969 235 EKVLRGHGADV-----------------------------------------KCVDWHPYKSLIVSGSK----------- 262 (877)
Q Consensus 235 ~~~l~~h~~~v-----------------------------------------~~v~~sp~~~~l~sgs~----------- 262 (877)
+-........+ ..++++++..+|++++.
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 76543211000 13466667777776663
Q ss_pred ---------C----CcccEEEEcCCCCceeEEecc--CCC----CeeE---EEEc-cCCC---eEEEEeCCCeEEEEEcC
Q psy13969 263 ---------D----NQQPVKLWDPKAGQALATLHA--HKS----TVMD---LAWN-QNGN---WLVTASRDHLLKVFDIR 316 (877)
Q Consensus 263 ---------d----g~~~I~iwd~~~~~~~~~~~~--h~~----~V~~---l~~s-p~g~---~l~s~s~Dg~I~iwd~~ 316 (877)
| +. |..+|.++++.+..++. |.. .+.. +... .+++ .|+.++.++.|+++|.+
T Consensus 277 ~~gg~~~~~d~~~~~~--v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~ 354 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSG--QVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRS 354 (582)
T ss_dssp CTTSCSTTCCCTTCSE--EEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETT
T ss_pred cCCCcccccCCcccce--EEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECC
Confidence 2 34 99999999998887743 321 1111 2222 4564 78889999999999988
Q ss_pred CCCcceEEEecCCC--C-------------------------------------------eEEEEEcCCCCcEEEEEe--
Q psy13969 317 NLSSEVQTFRGHKK--E-------------------------------------------ASAVAWHPQHEGLFSSGG-- 349 (877)
Q Consensus 317 ~~~~~~~~~~~h~~--~-------------------------------------------v~~i~~~p~~~~~l~sgs-- 349 (877)
+ .+.+..+..... . -..++++|+...+++...
T Consensus 355 t-G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~ 433 (582)
T 1flg_A 355 N-GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHW 433 (582)
T ss_dssp T-CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECE
T ss_pred C-CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhc
Confidence 7 444443332210 0 013456666553443321
Q ss_pred ------------------------------CCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEE
Q psy13969 350 ------------------------------ADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKF 399 (877)
Q Consensus 350 ------------------------------~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~i 399 (877)
.++.|..||+.+++.+-..... ..+..-.+...+.+|++++.|+.|+.
T Consensus 434 ~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagglvf~g~~dg~l~A 511 (582)
T 1flg_A 434 KEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH--LPLWAGVLATAGNLVFTGTGDGYFKA 511 (582)
T ss_dssp EEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES--SCCCSCCEEETTTEEEEECTTSEEEE
T ss_pred ceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCC--CCCcccceEeCCCEEEEECCCCcEEE
Confidence 2578999999998877555221 12222112223568888999999999
Q ss_pred EeCCCCCCCcc
Q psy13969 400 WTRNRLGDPMR 410 (877)
Q Consensus 400 wd~~~~~~~~~ 410 (877)
||.++.....+
T Consensus 512 ~D~~tG~~lW~ 522 (582)
T 1flg_A 512 FDAKSGKELWK 522 (582)
T ss_dssp EETTTCCEEEE
T ss_pred EECCCCCEEEE
Confidence 99987544433
No 289
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.89 E-value=6.4e-05 Score=89.28 Aligned_cols=220 Identities=8% Similarity=-0.015 Sum_probs=128.7
Q ss_pred CCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEE-CCCcEEEEeccC----CeeeEEeccCCCCeEEEEEcCCC
Q psy13969 180 QGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCS-DDGTVRVWDFYR----CTEEKVLRGHGADVKCVDWHPYK 254 (877)
Q Consensus 180 dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs-~Dg~I~iwd~~~----~~~~~~l~~h~~~v~~v~~sp~~ 254 (877)
...|++.+++...+..+......+..|+|++....|+.+. ..+.|+.+++.. ......+.........|++.+.+
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 4567777777665554444445677899998777666654 457899999865 22222222222335567887554
Q ss_pred CEE-EEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeC-C-CeEEEEEcCCCCcceEEEecCCCC
Q psy13969 255 SLI-VSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASR-D-HLLKVFDIRNLSSEVQTFRGHKKE 331 (877)
Q Consensus 255 ~~l-~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~-D-g~I~iwd~~~~~~~~~~~~~h~~~ 331 (877)
..| ++-...+. |.++++........+.........|++++.+.+|+.+.. . +.|.++++... .....+...-..
T Consensus 465 g~LY~tD~~~~~--I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~-~~~~l~~~~l~~ 541 (699)
T 1n7d_A 465 SNIYWTDSVLGT--VSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQW 541 (699)
T ss_dssp SBCEECCTTTSC--EEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-CCCEESCSSCSS
T ss_pred CcEEEEeccCCe--EEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-CeeEEEeCCCCC
Confidence 444 44344455 999998765443333333355678999986655555443 2 67888777642 111122222345
Q ss_pred eEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecC-cCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCC
Q psy13969 332 ASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ-AHDNIIWTMAWHPLGHILATGSNDHASKFWTRN 403 (877)
Q Consensus 332 v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~ 403 (877)
.+.|+|++++..|+++-+....|.++++........+.. ........|++..+ .++++....+.|..++..
T Consensus 542 PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRL 613 (699)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETT
T ss_pred ccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEcc
Confidence 678999998877888877788999999865333222211 11122345555443 444444556678777753
No 290
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.88 E-value=0.0059 Score=70.66 Aligned_cols=154 Identities=10% Similarity=0.029 Sum_probs=96.0
Q ss_pred CCEEEEEECCCcEEEEeccCCeeeEEeccCCC----CeE-EEEEcC---CCC-EEEEEec------CCcccEEEEcCCCC
Q psy13969 212 DSKFATCSDDGTVRVWDFYRCTEEKVLRGHGA----DVK-CVDWHP---YKS-LIVSGSK------DNQQPVKLWDPKAG 276 (877)
Q Consensus 212 ~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~----~v~-~v~~sp---~~~-~l~sgs~------dg~~~I~iwd~~~~ 276 (877)
+..|++++.|+.|..+|..+++.+..+..... .+. +..... +++ .|++++. ++. |+.+|.+++
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~--v~alD~~tG 194 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGR--LFARDPDTG 194 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCE--EEEECTTTC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCE--EEEEECCCC
Confidence 56788889999999999999998876653321 111 111111 123 5666553 566 999999999
Q ss_pred ceeEEeccCCCC-----------------------------------------eeEEEEccCCCeEEEEeC---------
Q psy13969 277 QALATLHAHKST-----------------------------------------VMDLAWNQNGNWLVTASR--------- 306 (877)
Q Consensus 277 ~~~~~~~~h~~~-----------------------------------------V~~l~~sp~g~~l~s~s~--------- 306 (877)
+.+.+....... -..++++++..+|++++.
T Consensus 195 ~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~ 274 (582)
T 1flg_A 195 EEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWA 274 (582)
T ss_dssp CEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGG
T ss_pred CEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcc
Confidence 887765321100 023566676677776663
Q ss_pred -----------C----CeEEEEEcCCCCcceEEEec--CCC-------CeEEEEEc-CCCC--cEEEEEeCCCcEEEEEc
Q psy13969 307 -----------D----HLLKVFDIRNLSSEVQTFRG--HKK-------EASAVAWH-PQHE--GLFSSGGADGSIMFWHV 359 (877)
Q Consensus 307 -----------D----g~I~iwd~~~~~~~~~~~~~--h~~-------~v~~i~~~-p~~~--~~l~sgs~dg~I~iwd~ 359 (877)
| +.|..+|.++ .+.+-.+.. |.. ...-+... .+++ .+++.++.++.|+++|.
T Consensus 275 r~~~gg~~~~~d~~~~~~v~AlD~~T-G~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~ 353 (582)
T 1flg_A 275 RTAKGGNPHDYDSLYTSGQVGVDPSS-GEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDR 353 (582)
T ss_dssp GSCTTSCSTTCCCTTCSEEEEECTTT-CCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEET
T ss_pred cccCCCcccccCCcccceEEEEeCCC-CCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEEC
Confidence 2 5799999988 444444432 321 11112221 3453 37788999999999999
Q ss_pred CCCceeEEe
Q psy13969 360 GADKEVGCI 368 (877)
Q Consensus 360 ~~~~~~~~~ 368 (877)
.+++.+..+
T Consensus 354 ~tG~~lw~~ 362 (582)
T 1flg_A 354 SNGKLQNAF 362 (582)
T ss_dssp TTCCEEEEE
T ss_pred CCCCEeccc
Confidence 999887654
No 291
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.84 E-value=0.0046 Score=66.71 Aligned_cols=224 Identities=11% Similarity=0.153 Sum_probs=121.5
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEE------ccCCCCeeEEEEcCC---CCEEEEEEC-C-----CcEE
Q psy13969 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTF------QGHKESIRGISFSPS---DSKFATCSD-D-----GTVR 225 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~------~~h~~~V~~i~~sp~---~~~l~sgs~-D-----g~I~ 225 (877)
....|+|.+|++++++ ...+.|++++ +.. ...+ .........|+|+++ +.+|+++.. + ..|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~-~g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR-EGR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE-TTE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE-CCC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4578889999885554 5568999988 332 2211 112346789999998 555555543 2 6788
Q ss_pred EEeccCCe-----ee-EEec---cCCCCeEEEEEcCCCCEEEEEecCC-----------cccEEEEcCCCC---------
Q psy13969 226 VWDFYRCT-----EE-KVLR---GHGADVKCVDWHPYKSLIVSGSKDN-----------QQPVKLWDPKAG--------- 276 (877)
Q Consensus 226 iwd~~~~~-----~~-~~l~---~h~~~v~~v~~sp~~~~l~sgs~dg-----------~~~I~iwd~~~~--------- 276 (877)
.|++.... .+ ..+. ........|+|.+++.++++.+..+ .+.|..+|....
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~ 188 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG 188 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC
Confidence 88876431 11 1122 1112346899999997666543211 122666665431
Q ss_pred ---ceeEEe-ccCCCCeeEEEEcc-CCCeEEEEeCCCe--------EEEEEcCC---------------CCcceEEEecC
Q psy13969 277 ---QALATL-HAHKSTVMDLAWNQ-NGNWLVTASRDHL--------LKVFDIRN---------------LSSEVQTFRGH 328 (877)
Q Consensus 277 ---~~~~~~-~~h~~~V~~l~~sp-~g~~l~s~s~Dg~--------I~iwd~~~---------------~~~~~~~~~~h 328 (877)
.....+ .+| .....|+|++ ++.++++-..... |.+...-. ...++..+. +
T Consensus 189 ~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~-~ 266 (352)
T 2ism_A 189 RRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP-Q 266 (352)
T ss_dssp CTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT-T
T ss_pred CCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC-C
Confidence 001111 122 3356789999 6665555433332 33322111 011233332 2
Q ss_pred CCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCce------eEEecCcCCCCEEEEEEcCCCCEEEEEE
Q psy13969 329 KKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKE------VGCIPQAHDNIIWTMAWHPLGHILATGS 392 (877)
Q Consensus 329 ~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~------~~~~~~~h~~~V~~v~~sp~g~~l~sg~ 392 (877)
......++|. ++. +|++.-..+.|...++..... ...+. .....+.+|++.||+.++++..
T Consensus 267 ~~ap~G~~~~-~G~-l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~-~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 267 GFPPGNLAFF-RGD-LYVAGLRGQALLRLVLEGERGRWRVLRVETAL-SGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp CCCEEEEEEE-TTE-EEEEETTTTEEEEEEEEEETTEEEEEEEEEEE-ESSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCcceEEE-CCE-EEEEECCCCEEEEEEECCCCcceeecchheec-ccCCCeeEEEECCCCcEEEEEe
Confidence 3345667773 443 666655666787777754321 12221 2235689999999997766654
No 292
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.82 E-value=0.0019 Score=67.73 Aligned_cols=202 Identities=11% Similarity=0.107 Sum_probs=124.0
Q ss_pred ccCCCCeeEEEEcCCCCEEEEEE-CCCcEEEEeccCCeeeEEeccC-------CCCeEEEEE---cCCCCEEEEEec---
Q psy13969 197 QGHKESIRGISFSPSDSKFATCS-DDGTVRVWDFYRCTEEKVLRGH-------GADVKCVDW---HPYKSLIVSGSK--- 262 (877)
Q Consensus 197 ~~h~~~V~~i~~sp~~~~l~sgs-~Dg~I~iwd~~~~~~~~~l~~h-------~~~v~~v~~---sp~~~~l~sgs~--- 262 (877)
....-.-.+++|+.....|..++ ..++|..||...+......... ...+..|.| .++++++++...
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~a 88 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKS 88 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTT
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccc
Confidence 33334445789988666776666 6899999998755433332211 113688999 688777665431
Q ss_pred ----------CCcccEEEEcCC---CCceeEEec--cC-----------CCCeeEEEEccCCCeEEEEeCC-CeEEEEEc
Q psy13969 263 ----------DNQQPVKLWDPK---AGQALATLH--AH-----------KSTVMDLAWNQNGNWLVTASRD-HLLKVFDI 315 (877)
Q Consensus 263 ----------dg~~~I~iwd~~---~~~~~~~~~--~h-----------~~~V~~l~~sp~g~~l~s~s~D-g~I~iwd~ 315 (877)
+.. |..||+. +++.+.... .. ......|+..++|+..++.+.- +.|..++.
T Consensus 89 f~~~g~~~~g~~~--v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 89 FNFADQSSHGASS--FHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp TCTTSCCSSSCCE--EEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT
T ss_pred ccccccccCCCCE--EEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeC
Confidence 454 9999999 777665543 11 1247899999999999998888 87777776
Q ss_pred CCCCcceEEEe-c-----CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCce--eEEecCc---CCCCEEEE-EEcC
Q psy13969 316 RNLSSEVQTFR-G-----HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKE--VGCIPQA---HDNIIWTM-AWHP 383 (877)
Q Consensus 316 ~~~~~~~~~~~-~-----h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~--~~~~~~~---h~~~V~~v-~~sp 383 (877)
.. ..+..+. . .....+.|+++|++..|++.-+ .+.|..+|+..... +...... .-.....| ..-.
T Consensus 167 dG--~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~ 243 (334)
T 2p9w_A 167 DG--KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPV 243 (334)
T ss_dssp TS--CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEE
T ss_pred CC--CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCccccccccc
Confidence 54 2222221 1 1223678999999985555545 99999999885332 1110001 11123332 3334
Q ss_pred CCCE-EEEEEcCCeEEEEeCC
Q psy13969 384 LGHI-LATGSNDHASKFWTRN 403 (877)
Q Consensus 384 ~g~~-l~sg~~dg~v~iwd~~ 403 (877)
+++. |++....+.+.+.+.+
T Consensus 244 ~G~vllV~~~~~~~~~l~S~D 264 (334)
T 2p9w_A 244 GNESVLVGARAPYAISFRSWD 264 (334)
T ss_dssp TTEEEEEEEETTEEEEEECSS
T ss_pred CCEEEEEEcCCCCEEEEECCC
Confidence 6666 5555556666666543
No 293
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.82 E-value=0.035 Score=57.46 Aligned_cols=235 Identities=10% Similarity=0.111 Sum_probs=147.0
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccC-CeeeEEeccC-
Q psy13969 164 HMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYR-CTEEKVLRGH- 241 (877)
Q Consensus 164 ~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~-~~~~~~l~~h- 241 (877)
+...+|..+.||.-. ..+++|+|++++...........|.-=.|-. .+.|+..+ +..|+-|+++. ....+.+..|
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis-~~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~ 147 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS-LNTVALVT-DNAVYHWSMEGESQPVKMFDRHS 147 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECS-SSEEEEEE-SSEEEEEESSTTCCCEEEEECCG
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecC-CCeEEEEc-CCcEEEEcccCCCCCceeeecch
Confidence 344577777777554 6789999998875443333455676677864 44555555 45899999974 3455555544
Q ss_pred ---CCCeEEEEEcCCCCEEEEEec---CCc--ccEEEEcCCCCceeEEeccCCCCeeEEEEccC---CCeEEEEeCC---
Q psy13969 242 ---GADVKCVDWHPYKSLIVSGSK---DNQ--QPVKLWDPKAGQALATLHAHKSTVMDLAWNQN---GNWLVTASRD--- 307 (877)
Q Consensus 242 ---~~~v~~v~~sp~~~~l~sgs~---dg~--~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~---g~~l~s~s~D--- 307 (877)
...|..-..+++.+.++..+- ++. +.+.+|..+.. .-+.+.+|......+.+.-+ ..+|+.+...
T Consensus 148 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g 226 (365)
T 2xzh_A 148 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 226 (365)
T ss_dssp GGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTE
T ss_pred hcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCC
Confidence 345666777888886654332 221 23889988654 45567777665544443221 1234444332
Q ss_pred CeEEEEEcCCC--Cc-c-----eEEEec---CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCE
Q psy13969 308 HLLKVFDIRNL--SS-E-----VQTFRG---HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNII 376 (877)
Q Consensus 308 g~I~iwd~~~~--~~-~-----~~~~~~---h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V 376 (877)
+.++|.++... .. . +..+-. -..--.++..+.... +++.-..-|.|++||+.++.++..- +-....|
T Consensus 227 ~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kyg-viyviTK~G~ihlyDleTgt~i~~n-rIS~d~i 304 (365)
T 2xzh_A 227 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYMN-RISGETI 304 (365)
T ss_dssp EEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCCEEEEE-ECCSSCE
T ss_pred cEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCC-EEEEEeCCcEEEEEEcccCcEEEEe-ccCCCce
Confidence 57999998542 11 1 111111 123345677777666 6777778999999999999998776 4455667
Q ss_pred EEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 377 WTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 377 ~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
...+.+....=|++....|.|.--.++.
T Consensus 305 F~ta~~~~~~Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 305 FVTAPHEATAGIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp EEEEEEGGGTEEEEEETTCEEEEEEECT
T ss_pred EEecccCCCCcEEEEcCCCEEEEEEECc
Confidence 6666655555666777888887777764
No 294
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.80 E-value=0.013 Score=63.21 Aligned_cols=228 Identities=12% Similarity=0.102 Sum_probs=124.5
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-ceEEE---ccCCCCeeEEEEcCC---CCEEEEEEC----C----CcEE
Q psy13969 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-NVKTF---QGHKESIRGISFSPS---DSKFATCSD----D----GTVR 225 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-~~~~~---~~h~~~V~~i~~sp~---~~~l~sgs~----D----g~I~ 225 (877)
....|+|.+|++++++ ..++.|++++.+.. .+..+ .........|+|+|+ +.+|+++.. + ..|.
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~ 108 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVI 108 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEE
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEE
Confidence 4567888888875544 55688988875443 11111 112346789999997 555555543 3 5788
Q ss_pred EEeccCC-------eee-EEecc-CCCCeEEEEEcCCCCEEEEEecCC-----------cccEEEEcCCCC---------
Q psy13969 226 VWDFYRC-------TEE-KVLRG-HGADVKCVDWHPYKSLIVSGSKDN-----------QQPVKLWDPKAG--------- 276 (877)
Q Consensus 226 iwd~~~~-------~~~-~~l~~-h~~~v~~v~~sp~~~~l~sgs~dg-----------~~~I~iwd~~~~--------- 276 (877)
.|++... +.+ ..+.. .......|+|.|++.++++.+..+ .+.|..+|....
T Consensus 109 r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~ 188 (354)
T 3a9g_A 109 RGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPN 188 (354)
T ss_dssp EEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTT
T ss_pred EEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCC
Confidence 8876543 111 11221 112346799999998766643211 112666665422
Q ss_pred ceeEEeccCCCCeeEEEEcc-CCCeEEEEeCCC---eEEEEEcCC---------------CCcceEEEecCCCCeEEEEE
Q psy13969 277 QALATLHAHKSTVMDLAWNQ-NGNWLVTASRDH---LLKVFDIRN---------------LSSEVQTFRGHKKEASAVAW 337 (877)
Q Consensus 277 ~~~~~~~~h~~~V~~l~~sp-~g~~l~s~s~Dg---~I~iwd~~~---------------~~~~~~~~~~h~~~v~~i~~ 337 (877)
..+.. .+| .....|+|++ +++++++-.... .|.+...-. ...++..+.........++|
T Consensus 189 ~~i~a-~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~ 266 (354)
T 3a9g_A 189 SPIWS-YGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASF 266 (354)
T ss_dssp CCEEE-ECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEE
T ss_pred CcEEE-Ecc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEE
Confidence 01111 223 3456899999 566555433222 233332110 01223333112345677888
Q ss_pred c-------CCCCcEEEEEeCCCcEEEEEcCCCcee---EEecCcCCCCEEEEEEcCCCCEEEEEE
Q psy13969 338 H-------PQHEGLFSSGGADGSIMFWHVGADKEV---GCIPQAHDNIIWTMAWHPLGHILATGS 392 (877)
Q Consensus 338 ~-------p~~~~~l~sgs~dg~I~iwd~~~~~~~---~~~~~~h~~~V~~v~~sp~g~~l~sg~ 392 (877)
. .++ .+|++.-..+.|...++.....+ ..+.......+.+|++.||+.++++..
T Consensus 267 y~g~~fp~~~G-~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 267 VHGDMFPGLRG-WLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCSSSCGGGTT-EEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred ECCCCCcccCC-cEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 3 344 36666666678888888753222 233222245789999999997666654
No 295
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.79 E-value=0.0029 Score=66.84 Aligned_cols=194 Identities=10% Similarity=0.163 Sum_probs=123.9
Q ss_pred CCCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCC----CC---EEEEEE-C--CCcEEEEecc-CCeeeEEe
Q psy13969 170 NGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPS----DS---KFATCS-D--DGTVRVWDFY-RCTEEKVL 238 (877)
Q Consensus 170 d~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~----~~---~l~sgs-~--Dg~I~iwd~~-~~~~~~~l 238 (877)
..+++++....+-+.+||++.+.+..+.. ..++.|..-+. ++ ++++.. . +.+|.+|++. ....+..+
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC
T ss_pred CccEEEEEcCCCCEEEEcCCCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec
Confidence 34667777888899999998888777753 45666666542 22 223333 3 5789999773 22234444
Q ss_pred cc------CC-CCeEEEEE--cCC-CC-EEEEEecCCcccEEEEcCC-------CCceeEEeccCCCCeeEEEEccCCCe
Q psy13969 239 RG------HG-ADVKCVDW--HPY-KS-LIVSGSKDNQQPVKLWDPK-------AGQALATLHAHKSTVMDLAWNQNGNW 300 (877)
Q Consensus 239 ~~------h~-~~v~~v~~--sp~-~~-~l~sgs~dg~~~I~iwd~~-------~~~~~~~~~~h~~~V~~l~~sp~g~~ 300 (877)
.. .. ..+..+|+ ++. +. ++++...++. +..|++. +.+.+++|.. .+.+..|...+...+
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~--~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGE--FEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGR 193 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSE--EEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTE
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCe--EEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCe
Confidence 21 11 55667777 664 43 6777777776 8888873 3355667654 467888999988889
Q ss_pred EEEEeCCCeEEEEEcCCC----CcceEEEe-cC-CCCeEEEEE--cCCCC-cEEEEEeCCCcEEEEEcC-CCceeEEe
Q psy13969 301 LVTASRDHLLKVFDIRNL----SSEVQTFR-GH-KKEASAVAW--HPQHE-GLFSSGGADGSIMFWHVG-ADKEVGCI 368 (877)
Q Consensus 301 l~s~s~Dg~I~iwd~~~~----~~~~~~~~-~h-~~~v~~i~~--~p~~~-~~l~sgs~dg~I~iwd~~-~~~~~~~~ 368 (877)
|+++-.|.-|..||.+.. ...+..+. .+ ...+..|++ .+++. ++|+|+-.+.++.|||.. +.+.+..+
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 999999977777775521 12333331 22 246788887 45555 455655567799999996 44444444
No 296
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.76 E-value=0.00033 Score=82.89 Aligned_cols=229 Identities=10% Similarity=0.022 Sum_probs=127.9
Q ss_pred EEEEEEcCCCCEEEEEe-CCCeEEEEeCCCcceEEEcc-C-CCCeeEEEEcCCCCEEEEEE-CC-----CcEEEEeccCC
Q psy13969 162 VRHMVWSHNGLWMVTSD-HQGYIKYWQSNMNNVKTFQG-H-KESIRGISFSPSDSKFATCS-DD-----GTVRVWDFYRC 232 (877)
Q Consensus 162 V~~l~~spd~~~l~sg~-~dg~v~iwd~~~~~~~~~~~-h-~~~V~~i~~sp~~~~l~sgs-~D-----g~I~iwd~~~~ 232 (877)
..++++..+++++++|+ .+..+.+||..+..-..+.. + ...-.++++.+++++++.++ .+ ..+.+||..+.
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 34577788999999887 45689999977654433322 1 11223456667889988888 34 57999999876
Q ss_pred eeeEEe----ccCCCCeEEEEEcCCCCEEEEEecCCc-------ccEEEEcCCCCceeEEeccCC---------CCeeEE
Q psy13969 233 TEEKVL----RGHGADVKCVDWHPYKSLIVSGSKDNQ-------QPVKLWDPKAGQALATLHAHK---------STVMDL 292 (877)
Q Consensus 233 ~~~~~l----~~h~~~v~~v~~sp~~~~l~sgs~dg~-------~~I~iwd~~~~~~~~~~~~h~---------~~V~~l 292 (877)
+-...- ......-....+..++..++.++.++. ..|.+||..+.........+. ..-.++
T Consensus 325 ~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av 404 (656)
T 1k3i_A 325 TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAV 404 (656)
T ss_dssp EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEE
T ss_pred cceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceE
Confidence 543320 000000000112234455555544432 127888988765443332221 123445
Q ss_pred EEcc-CCCeEEEEeCCC-----------eEEEEEcCCCCcceEEEe---cCCCC-eEEEEEcCCCCcEEEEEeCC-----
Q psy13969 293 AWNQ-NGNWLVTASRDH-----------LLKVFDIRNLSSEVQTFR---GHKKE-ASAVAWHPQHEGLFSSGGAD----- 351 (877)
Q Consensus 293 ~~sp-~g~~l~s~s~Dg-----------~I~iwd~~~~~~~~~~~~---~h~~~-v~~i~~~p~~~~~l~sgs~d----- 351 (877)
.|.. +++++++++.+. .|.+||..+. ....+. .+... -.+++..+++. +++.++.+
T Consensus 405 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~~mp~~R~~~~~~~l~~g~-i~v~GG~~~~~~~ 481 (656)
T 1k3i_A 405 MYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS--PNTVFASNGLYFARTFHTSVVLPDGS-TFITGGQRRGIPF 481 (656)
T ss_dssp EEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC--CEEEECTTCCSSCCBSCEEEECTTSC-EEEECCBSBCCTT
T ss_pred eccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC--CeeEEccCCCCCCcccCCeEECCCCC-EEEECCcccCcCc
Confidence 5543 677777777432 5778887652 222221 12222 23455667777 77777754
Q ss_pred ------CcEEEEEcCCCceeEEec-CcCCCCEEEEEEcCCCCEEEEEEc
Q psy13969 352 ------GSIMFWHVGADKEVGCIP-QAHDNIIWTMAWHPLGHILATGSN 393 (877)
Q Consensus 352 ------g~I~iwd~~~~~~~~~~~-~~h~~~V~~v~~sp~g~~l~sg~~ 393 (877)
..+.+||..+.+-...-. ........++.+.+++++|++|+.
T Consensus 482 ~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 482 EDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 468999997755332111 111222334566789999999885
No 297
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.71 E-value=0.03 Score=65.27 Aligned_cols=224 Identities=9% Similarity=-0.021 Sum_probs=140.9
Q ss_pred EEEEEeCCCeEEEEeCCCcceEEEcc--CCCCeeEEEEcCCCCEEEEEE-CCCcEEEEeccCCeeeEEeccCCCCeEEEE
Q psy13969 173 WMVTSDHQGYIKYWQSNMNNVKTFQG--HKESIRGISFSPSDSKFATCS-DDGTVRVWDFYRCTEEKVLRGHGADVKCVD 249 (877)
Q Consensus 173 ~l~sg~~dg~v~iwd~~~~~~~~~~~--h~~~V~~i~~sp~~~~l~sgs-~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~ 249 (877)
+|+.+ ....|+..+++......... .-..+..|+|++....|+.+. .++.|..+++........+.........|+
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlA 86 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMA 86 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEE
Confidence 44444 45678888877654333221 234678999998776666554 578899999865444444433334577888
Q ss_pred EcCCCCEEEEEec-CCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeC--CCeEEEEEcCCCCcceEEEe
Q psy13969 250 WHPYKSLIVSGSK-DNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASR--DHLLKVFDIRNLSSEVQTFR 326 (877)
Q Consensus 250 ~sp~~~~l~sgs~-dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~--Dg~I~iwd~~~~~~~~~~~~ 326 (877)
+...+..|+.+.. .+. |.+.++........+...-.....|+++|...+|+.+.. ...|...++... ....+.
T Consensus 87 vD~~~~~LY~tD~~~~~--I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~--~~~~l~ 162 (628)
T 4a0p_A 87 VDWLGKNLYWADTGTNR--IEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS--ERTTLV 162 (628)
T ss_dssp EETTTTEEEEEETTTTE--EEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC--SCEEEE
T ss_pred EEeCCCEEEEEECCCCE--EEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC--ceEEEE
Confidence 8876665555544 444 999998754433233334456789999986666666653 467777777652 233333
Q ss_pred cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 327 GHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 327 ~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
..-.....|++++++..++++-...+.|..+|+..... ..+ ...-.....|++.. +.++++-...+.|...|..+
T Consensus 163 ~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~-~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~t 237 (628)
T 4a0p_A 163 PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVI-ADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTS 237 (628)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEE-EECCSCEEEEEEET-TEEEEEETTTTEEEEEETTT
T ss_pred CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEe-eccCCCceEEEEEC-CEEEEecCCCCEEEEEECCC
Confidence 34567889999998887777777778999999865443 222 22233456788765 34444444467787777543
No 298
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.69 E-value=0.0072 Score=63.88 Aligned_cols=187 Identities=12% Similarity=0.223 Sum_probs=118.2
Q ss_pred CCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCC----CC---EEEEEecC-CcccEEEEcC--CCCceeE
Q psy13969 211 SDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPY----KS---LIVSGSKD-NQQPVKLWDP--KAGQALA 280 (877)
Q Consensus 211 ~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~----~~---~l~sgs~d-g~~~I~iwd~--~~~~~~~ 280 (877)
...++++....+-|.+||+ +++.+..+.. ..++.|..-+. ++ ++++...+ +..+|.+|++ .+.+ +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence 3456777778889999999 8888888753 45666666552 22 23333333 0234999966 3443 44
Q ss_pred Eecc------CC-CCeeEEEE--ccC-CC-eEEEEeCCCeEEEEEcCCC------CcceEEEecCCCCeEEEEEcCCCCc
Q psy13969 281 TLHA------HK-STVMDLAW--NQN-GN-WLVTASRDHLLKVFDIRNL------SSEVQTFRGHKKEASAVAWHPQHEG 343 (877)
Q Consensus 281 ~~~~------h~-~~V~~l~~--sp~-g~-~l~s~s~Dg~I~iwd~~~~------~~~~~~~~~h~~~v~~i~~~p~~~~ 343 (877)
.+.. .. ..++.||+ ++. +. ++++...++.+..|++... .+.++++.. ...+..|...+...
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g- 192 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYG- 192 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTT-
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCC-
Confidence 4421 11 56677777 664 43 6888888999999998431 244566654 35677888887766
Q ss_pred EEEEEeCCCcEEEEEcC-----CCceeEEecCcC-CCCEEEEEE--cCCCC-EEEEEE-cCCeEEEEeCC
Q psy13969 344 LFSSGGADGSIMFWHVG-----ADKEVGCIPQAH-DNIIWTMAW--HPLGH-ILATGS-NDHASKFWTRN 403 (877)
Q Consensus 344 ~l~sgs~dg~I~iwd~~-----~~~~~~~~~~~h-~~~V~~v~~--sp~g~-~l~sg~-~dg~v~iwd~~ 403 (877)
.|+.+-++.-|..|+.. +.+.+..+...+ ...+..|++ .++++ +|++++ .+.++.+||..
T Consensus 193 ~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 193 RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 56667777656666644 234554442232 246888887 45555 666666 67799999985
No 299
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.69 E-value=0.14 Score=59.67 Aligned_cols=281 Identities=7% Similarity=-0.010 Sum_probs=146.9
Q ss_pred CCEEEEEEcCCCCEEEEEeC--CCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEEC-CCcEEEEeccCCeeeE
Q psy13969 160 CAVRHMVWSHNGLWMVTSDH--QGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSD-DGTVRVWDFYRCTEEK 236 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~~--dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~-Dg~I~iwd~~~~~~~~ 236 (877)
.....|++.|...+|+..+. ...|...+++......+...-.....|++++++..|+.+.. ...|..+|+..... .
T Consensus 123 ~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~ 201 (628)
T 4a0p_A 123 DSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-E 201 (628)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-E
T ss_pred CCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-E
Confidence 45789999986556665553 56788888887766665555556789999987777766654 56788888754322 2
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEec-CCcccEEEEcCCCCceeEEecc-------------------------------
Q psy13969 237 VLRGHGADVKCVDWHPYKSLIVSGSK-DNQQPVKLWDPKAGQALATLHA------------------------------- 284 (877)
Q Consensus 237 ~l~~h~~~v~~v~~sp~~~~l~sgs~-dg~~~I~iwd~~~~~~~~~~~~------------------------------- 284 (877)
.+.........|++.. ..|+.+.. .+. |...|..+++....+..
T Consensus 202 v~~~~l~~P~glav~~--~~ly~tD~~~~~--I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~ 277 (628)
T 4a0p_A 202 VIADDLPHPFGLTQYQ--DYIYWTDWSRRS--IERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSH 277 (628)
T ss_dssp EEEECCSCEEEEEEET--TEEEEEETTTTE--EEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSS
T ss_pred EeeccCCCceEEEEEC--CEEEEecCCCCE--EEEEECCCCCceEEEecCCCCcceeeeeeecccccceEeccCCCCcch
Confidence 3322223334455442 22222222 222 44444322211111000
Q ss_pred ------------------------------------------------------------CCCCeeEEEEccCCCeEEEE
Q psy13969 285 ------------------------------------------------------------HKSTVMDLAWNQNGNWLVTA 304 (877)
Q Consensus 285 ------------------------------------------------------------h~~~V~~l~~sp~g~~l~s~ 304 (877)
.-..+..|+|++....|+.+
T Consensus 278 ~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~s 357 (628)
T 4a0p_A 278 LCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWI 357 (628)
T ss_dssp EEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEEETTEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEE
T ss_pred hhhcCCCCCeeEEcCCCcEecccCCcCccccceeeeeccceEEEEecccccCceEEEEehhcCCceEEEEecCCCeEEEE
Confidence 00123344444433333333
Q ss_pred e-CCCeEEEEEcCCCCcceEEEec------CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEE
Q psy13969 305 S-RDHLLKVFDIRNLSSEVQTFRG------HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIW 377 (877)
Q Consensus 305 s-~Dg~I~iwd~~~~~~~~~~~~~------h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~ 377 (877)
. ..+.|+.+++... .....+.. ....+..|++...+..++++-+..+.|.+.++... ....+.........
T Consensus 358 D~~~~~I~r~~~~g~-~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~-~~~~l~~~~l~~Pr 435 (628)
T 4a0p_A 358 DSRQNMIRKAQEDGS-QGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGR-SVGVVLKGEQDRPR 435 (628)
T ss_dssp ETTTTEEEEEETTSC-SCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-EEEEEEECTTCCEE
T ss_pred ecCcceEEEEEcCCC-CceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCCC-eEEEEEeCCCCcee
Confidence 2 2344444444321 11112211 12356789998887878888878889999998643 33333233445689
Q ss_pred EEEEcCCCCEEEEEEc-CCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccCCCCeeeecCC
Q psy13969 378 TMAWHPLGHILATGSN-DHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPS 452 (877)
Q Consensus 378 ~v~~sp~g~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g~d~~~~~~~~ 452 (877)
+|+++|...+|+.+.. ...-+||.....+........ .....-..++++.+...|+.+-.....|..+..
T Consensus 436 ~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~-----~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~ 506 (628)
T 4a0p_A 436 AVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFF-----SGLSKPIALALDSRLGKLFWADSDLRRIESSDL 506 (628)
T ss_dssp EEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEEC-----SSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred eEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEe-----ccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeC
Confidence 9999995444444433 332244444332332221111 112234567777766666655444556655544
No 300
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.65 E-value=0.1 Score=56.21 Aligned_cols=236 Identities=10% Similarity=0.108 Sum_probs=148.8
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccC-CeeeEEeccC
Q psy13969 163 RHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYR-CTEEKVLRGH 241 (877)
Q Consensus 163 ~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~-~~~~~~l~~h 241 (877)
-+...+|..+.||.=. ..++.|+|++++...........|.-=.|-. .+.|+..+ +..|+-|+++. ....+.+..|
T Consensus 69 dsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis-~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~ 145 (494)
T 1bpo_A 69 DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS-LNTVALVT-DNAVYHWSMEGESQPVKMFDRH 145 (494)
T ss_dssp SEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEE-TTEEEEEC-SSEEEEEESSSSCCCEEEEECC
T ss_pred ceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecC-CCeEEEEc-CCeeEEecccCCCCchhheecc
Confidence 3455677777666544 7899999998865433333344565667763 34555555 45899999964 3455555544
Q ss_pred ----CCCeEEEEEcCCCCEEEEEec---CCc--ccEEEEcCCCCceeEEeccCCCCeeEEEEccC---CCeEEEEeCC--
Q psy13969 242 ----GADVKCVDWHPYKSLIVSGSK---DNQ--QPVKLWDPKAGQALATLHAHKSTVMDLAWNQN---GNWLVTASRD-- 307 (877)
Q Consensus 242 ----~~~v~~v~~sp~~~~l~sgs~---dg~--~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~---g~~l~s~s~D-- 307 (877)
...|..-..+++.+.++..+- ++. +.+.+|..+.. .-..+.+|.....++.+.-+ ..+|+.+...
T Consensus 146 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~ 224 (494)
T 1bpo_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (494)
T ss_dssp GGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTT
T ss_pred hhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCC
Confidence 345667777888887664332 221 23889988754 35567777766655554321 1244444443
Q ss_pred -CeEEEEEcCCC--Cc-c--eEE---Ee---cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCC
Q psy13969 308 -HLLKVFDIRNL--SS-E--VQT---FR---GHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNI 375 (877)
Q Consensus 308 -g~I~iwd~~~~--~~-~--~~~---~~---~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~ 375 (877)
+.++|.++... .. . ... +- .-..--.++..++... +++.-..-|.|++||+.++.++..- +-....
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg-viyviTK~G~i~lyDleTgt~i~~n-rIs~~~ 302 (494)
T 1bpo_A 225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYMN-RISGET 302 (494)
T ss_dssp CCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCCEEEEE-ECCSSC
T ss_pred CcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC-EEEEEecCceEEEEecccceeeeee-cccCCc
Confidence 68999998642 11 1 111 11 1123345677777766 6777778999999999999998776 455666
Q ss_pred EEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 376 IWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 376 V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
|...+.+....=+++....|.|.--.++.
T Consensus 303 iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 303 IFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEEECT
T ss_pred eEEecccCCCCcEEEEccCceEEEEEEcc
Confidence 77666666666677777888877777654
No 301
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.60 E-value=0.0094 Score=64.28 Aligned_cols=232 Identities=13% Similarity=0.112 Sum_probs=120.3
Q ss_pred CCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeee--EEec---cCCCCeEEEEEcCC---CCEEEEEecC------Ccc
Q psy13969 201 ESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEE--KVLR---GHGADVKCVDWHPY---KSLIVSGSKD------NQQ 266 (877)
Q Consensus 201 ~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~--~~l~---~h~~~v~~v~~sp~---~~~l~sgs~d------g~~ 266 (877)
..-+.|+|.+++++++ +..++.|++++ +++.. ..+. ........|+|+|+ +..|+++... ..
T Consensus 31 ~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~- 106 (352)
T 2ism_A 31 EVPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ- 106 (352)
T ss_dssp SCEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE-
T ss_pred CCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE-
Confidence 3467999999998555 56679999998 33322 1111 12356789999998 5555544432 34
Q ss_pred cEEEEcCCCCc-----ee-EEec---cCCCCeeEEEEccCCCeEEEEeC-------------CCeEEEEEcCCC------
Q psy13969 267 PVKLWDPKAGQ-----AL-ATLH---AHKSTVMDLAWNQNGNWLVTASR-------------DHLLKVFDIRNL------ 318 (877)
Q Consensus 267 ~I~iwd~~~~~-----~~-~~~~---~h~~~V~~l~~sp~g~~l~s~s~-------------Dg~I~iwd~~~~------ 318 (877)
|..|+..... .+ ..+. ........|+|.+++.++++.+. .+.|.-+|....
T Consensus 107 -v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np 185 (352)
T 2ism_A 107 -VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP 185 (352)
T ss_dssp -EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred -EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Confidence 8888876431 11 1232 11123468999999976665432 145555554320
Q ss_pred ------CcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcE------EEEEcCCCc------------------eeEEe
Q psy13969 319 ------SSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSI------MFWHVGADK------------------EVGCI 368 (877)
Q Consensus 319 ------~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I------~iwd~~~~~------------------~~~~~ 368 (877)
........+| .....++|+++...++++-.....+ .|.-+..+. .+..+
T Consensus 186 f~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~ 264 (352)
T 2ism_A 186 FLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW 264 (352)
T ss_dssp TTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred ccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec
Confidence 0111112223 2356789999433366554333331 122222221 11122
Q ss_pred cCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccC
Q psy13969 369 PQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMG 442 (877)
Q Consensus 369 ~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g 442 (877)
.+......++| .++.++++.-..+.|...+++........ .....+......+.++++.+|+..+++...
T Consensus 265 --~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~-~~~~~~~~~~~rp~~v~~~pdG~lyv~~~~ 334 (352)
T 2ism_A 265 --PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRV-LRVETALSGFGRLREVQVGPDGALYVTTSN 334 (352)
T ss_dssp --TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEE-EEEEEEEESSCCEEEEEECTTSCEEEEECS
T ss_pred --CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceee-cchheecccCCCeeEEEECCCCcEEEEEeC
Confidence 22234667777 35666666556667777776533211100 000111111235678888888877777543
No 302
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.60 E-value=0.00016 Score=85.95 Aligned_cols=203 Identities=14% Similarity=0.062 Sum_probs=120.6
Q ss_pred CCEEEEEEcCCCCEEEEEe-CCCeEEEEeCCC----cceEE-EccCCCCeeEEEEcCCCC-EEEEEECCCcEEEEeccCC
Q psy13969 160 CAVRHMVWSHNGLWMVTSD-HQGYIKYWQSNM----NNVKT-FQGHKESIRGISFSPSDS-KFATCSDDGTVRVWDFYRC 232 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~-~dg~v~iwd~~~----~~~~~-~~~h~~~V~~i~~sp~~~-~l~sgs~Dg~I~iwd~~~~ 232 (877)
..+..|+|++....|+.++ ..+.|+.++++. ..... +.........|++...+. ++++-...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 4566788988666665544 457888888765 22222 211222345678875444 4444455688999998654
Q ss_pred eeeEEeccCCCCeEEEEEcCCCCEEEEEecC--CcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEE-eCCCe
Q psy13969 233 TEEKVLRGHGADVKCVDWHPYKSLIVSGSKD--NQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTA-SRDHL 309 (877)
Q Consensus 233 ~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~d--g~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~-s~Dg~ 309 (877)
.....+.........|+++|.+.+|+.+... +. |.++++........+...-.....|+|++++..|+++ +....
T Consensus 486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~--I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~ 563 (699)
T 1n7d_A 486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAK--IKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 563 (699)
T ss_dssp CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCC--EEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTE
T ss_pred ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCe--EEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCe
Confidence 4333333333456788999876655554432 44 8888876433222222223456789999876555554 56678
Q ss_pred EEEEEcCCCCcceEEEec---CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEe
Q psy13969 310 LKVFDIRNLSSEVQTFRG---HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCI 368 (877)
Q Consensus 310 I~iwd~~~~~~~~~~~~~---h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~ 368 (877)
|.++|+... . ...+.. .......|++.. ..++++....+.|..+|..+++.+..+
T Consensus 564 I~~~d~dG~-~-~~~~~~~~~~~~~P~glavd~--~~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 564 ISSIDVNGG-N-RKTILEDEKRLAHPFSLAVFE--DKVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp EEEECSSSS-C-CEEECCCSSSCSSCCCCEEET--TEEEEECSTTTCEEEEETTTEEEEECC
T ss_pred EEEEccCCC-c-eEEEEecCCcCCCceEeEEEC--CEEEEEeCCCCeEEEEEccCCCceEEe
Confidence 999998652 2 222221 112334556544 357777767788999998877776665
No 303
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.59 E-value=0.02 Score=61.72 Aligned_cols=231 Identities=12% Similarity=0.080 Sum_probs=121.3
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEE-------ccCCCCeeEEEEcCC---CCEEEEEEC--------CC
Q psy13969 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTF-------QGHKESIRGISFSPS---DSKFATCSD--------DG 222 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~-------~~h~~~V~~i~~sp~---~~~l~sgs~--------Dg 222 (877)
....|+|.+|+++|+.+...+.|++++.+......+ .........|+|+|+ +.+|+++.. ..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 457888889888333445678999988544321111 112345689999996 555555432 23
Q ss_pred cEEEEeccCC----eeeE-Eecc------CCCCeEEEEEcCCCCEEEEEecCC-----------cccEEEEcCCCCc---
Q psy13969 223 TVRVWDFYRC----TEEK-VLRG------HGADVKCVDWHPYKSLIVSGSKDN-----------QQPVKLWDPKAGQ--- 277 (877)
Q Consensus 223 ~I~iwd~~~~----~~~~-~l~~------h~~~v~~v~~sp~~~~l~sgs~dg-----------~~~I~iwd~~~~~--- 277 (877)
.|..|++... .... .+.. .......|+|.|++.++++.+..+ .+.|.-+|.....
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~ 178 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDD 178 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTT
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCC
Confidence 5666766432 1111 1211 112246799999996555543321 1126666654320
Q ss_pred ---------eeEEeccCCCCeeEEEEcc-CCCeEEEEeC-CCeEEEEEcCC-----------------------------
Q psy13969 278 ---------ALATLHAHKSTVMDLAWNQ-NGNWLVTASR-DHLLKVFDIRN----------------------------- 317 (877)
Q Consensus 278 ---------~~~~~~~h~~~V~~l~~sp-~g~~l~s~s~-Dg~I~iwd~~~----------------------------- 317 (877)
....+..-......|+|++ +++++++-.. ++.=.|.-+..
T Consensus 179 npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~ 258 (353)
T 2g8s_A 179 NPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVA 258 (353)
T ss_dssp CTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCT
T ss_pred CCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCC
Confidence 1111211123467899999 5554444322 11112211111
Q ss_pred -CCcceEEEecCCCCeEEEEEcCC------CCcEEEEEeCCCcEEEEEcCCCceeEE--ecCcCCCCEEEEEEcCCCCEE
Q psy13969 318 -LSSEVQTFRGHKKEASAVAWHPQ------HEGLFSSGGADGSIMFWHVGADKEVGC--IPQAHDNIIWTMAWHPLGHIL 388 (877)
Q Consensus 318 -~~~~~~~~~~h~~~v~~i~~~p~------~~~~l~sgs~dg~I~iwd~~~~~~~~~--~~~~h~~~V~~v~~sp~g~~l 388 (877)
...++..+. +...+..++|... ...+|++.-..+.|...++...+.+.. +.......+..|++.||+.++
T Consensus 259 ~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~ly 337 (353)
T 2g8s_A 259 GTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLY 337 (353)
T ss_dssp TSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEE
T ss_pred CccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEE
Confidence 011122232 2345677888642 123666666677888888775543322 212223579999999999866
Q ss_pred EEEE
Q psy13969 389 ATGS 392 (877)
Q Consensus 389 ~sg~ 392 (877)
++..
T Consensus 338 v~td 341 (353)
T 2g8s_A 338 VLTD 341 (353)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 6543
No 304
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.57 E-value=0.019 Score=64.18 Aligned_cols=199 Identities=10% Similarity=0.044 Sum_probs=117.9
Q ss_pred eeEEEEcC-CCCEEEEEEC-CCcEEEEeccCCeeeEEeccC---CCCeEEEEE-------cCCCCEEEEEecCC-----c
Q psy13969 203 IRGISFSP-SDSKFATCSD-DGTVRVWDFYRCTEEKVLRGH---GADVKCVDW-------HPYKSLIVSGSKDN-----Q 265 (877)
Q Consensus 203 V~~i~~sp-~~~~l~sgs~-Dg~I~iwd~~~~~~~~~l~~h---~~~v~~v~~-------sp~~~~l~sgs~dg-----~ 265 (877)
...|+|+| +...|+++.. ...|+++|+.+......+..- ......|+| ++++.+|+++...+ .
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 56899998 3555555544 467999998776665544322 235789999 99999777776654 1
Q ss_pred ccEEEEcCCC-Ccee-----EEeccCCCCeeEEEEccC-CCeEEEEeCCCeEEEEEcC-------CCCc------c----
Q psy13969 266 QPVKLWDPKA-GQAL-----ATLHAHKSTVMDLAWNQN-GNWLVTASRDHLLKVFDIR-------NLSS------E---- 321 (877)
Q Consensus 266 ~~I~iwd~~~-~~~~-----~~~~~h~~~V~~l~~sp~-g~~l~s~s~Dg~I~iwd~~-------~~~~------~---- 321 (877)
..|.+++... +... ..+.. ......++++++ +.++++-..++.|..||+. +... .
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 2366776433 1211 22222 224567888994 5555566677889999987 3221 0
Q ss_pred eEE-Ee-cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCC--Cce--eEEec-----Cc---------CCCCEE-EEE
Q psy13969 322 VQT-FR-GHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGA--DKE--VGCIP-----QA---------HDNIIW-TMA 380 (877)
Q Consensus 322 ~~~-~~-~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~--~~~--~~~~~-----~~---------h~~~V~-~v~ 380 (877)
+.. +. ........|+|+|++..++++-+....|+.++... ... ...+. .. .-.... .++
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 111 22 22345689999999986666666778898866533 221 01110 00 011244 344
Q ss_pred Ec-------CCCCEEEEEEcCCeEEEEeC
Q psy13969 381 WH-------PLGHILATGSNDHASKFWTR 402 (877)
Q Consensus 381 ~s-------p~g~~l~sg~~dg~v~iwd~ 402 (877)
.. .++.++++=.....|+.++.
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~~ 408 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFCVRKVTP 408 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTEEEEECT
T ss_pred EccccccccCCCeEEEEECCCCEEEEEeC
Confidence 54 45566666666778888873
No 305
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.53 E-value=0.018 Score=66.95 Aligned_cols=221 Identities=6% Similarity=0.019 Sum_probs=129.3
Q ss_pred CCCeEEEEeCCCcc--eEEEccCCCCeeEEEEcCCCCEEEEEEC-CCcEEEEeccCCee-eEEeccCCCCeEEEEEcCCC
Q psy13969 179 HQGYIKYWQSNMNN--VKTFQGHKESIRGISFSPSDSKFATCSD-DGTVRVWDFYRCTE-EKVLRGHGADVKCVDWHPYK 254 (877)
Q Consensus 179 ~dg~v~iwd~~~~~--~~~~~~h~~~V~~i~~sp~~~~l~sgs~-Dg~I~iwd~~~~~~-~~~l~~h~~~v~~v~~sp~~ 254 (877)
....|++.+++... ...+...-..+..|+|++.+..|+.+.. .+.|..+++..... ...+.........|+++..+
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~ 95 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 95 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTT
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecC
Confidence 35667777776542 3333334455789999987777776654 57888898865432 23333333568899999866
Q ss_pred CEEEEEe-cCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeC--CCeEEEEEcCCCCcceEEEecCCCC
Q psy13969 255 SLIVSGS-KDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASR--DHLLKVFDIRNLSSEVQTFRGHKKE 331 (877)
Q Consensus 255 ~~l~sgs-~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~--Dg~I~iwd~~~~~~~~~~~~~h~~~ 331 (877)
..|+.+. ..+. |.+.++........+...-.....|+++|...+|+.+.. ...|...++.. ..........-..
T Consensus 96 ~~ly~~d~~~~~--I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG-~~~~~l~~~~~~~ 172 (619)
T 3s94_A 96 EKLYWTDSETNR--IEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINSEIYW 172 (619)
T ss_dssp TEEEEEETTTTE--EEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEEEECSSCSS
T ss_pred CEEEEEeCCCCE--EEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC-CceEEEEeCCCCC
Confidence 6555554 4455 999998755433333344456788999997666666653 35666667654 2222222233456
Q ss_pred eEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 332 ASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 332 v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
.+.|+++++...++++-.....|..+|+........+ .........|++..+ .++++-...+.|...|..+
T Consensus 173 P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~-~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~t 243 (619)
T 3s94_A 173 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV-KGSLPHPFALTLFED-ILYWTDWSTHSILACNKYT 243 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC----------CCCEEESSS-EEEEECTTTCSEEEEESSS
T ss_pred CcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEE-eCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCC
Confidence 7899999987767777667788999998654433222 111222346677655 3334434556777777654
No 306
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.52 E-value=0.13 Score=54.58 Aligned_cols=230 Identities=13% Similarity=0.123 Sum_probs=126.0
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEc-------cCCCCeeEEEEcCC---CCEEEEE-E--CCCcEEE
Q psy13969 160 CAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQ-------GHKESIRGISFSPS---DSKFATC-S--DDGTVRV 226 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~-------~h~~~V~~i~~sp~---~~~l~sg-s--~Dg~I~i 226 (877)
.....|+|.||+.+|++-...+.|++++.+......+. ........|+|+|+ +.+|+++ + .+..|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 45678899999987777766899999986544332221 22456789999995 4455543 2 3556766
Q ss_pred EeccCC----------eeeE-Eec-cCCCCeEEEEEcCCCCEEEEEecCC-----------cccEEEEcCCCCc------
Q psy13969 227 WDFYRC----------TEEK-VLR-GHGADVKCVDWHPYKSLIVSGSKDN-----------QQPVKLWDPKAGQ------ 277 (877)
Q Consensus 227 wd~~~~----------~~~~-~l~-~h~~~v~~v~~sp~~~~l~sgs~dg-----------~~~I~iwd~~~~~------ 277 (877)
|.+... +.+. .+. ........|+|.+|+.++++.+..+ .+.|.-++....-
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf 191 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF 191 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence 765431 1111 121 1122356799999998777654211 1225555654220
Q ss_pred -eeEEe-ccCCCCeeEEEEccCCCeEEEEe-CCCeEEEEEcCCC-----------------CcceEEEecCCCCeEEEEE
Q psy13969 278 -ALATL-HAHKSTVMDLAWNQNGNWLVTAS-RDHLLKVFDIRNL-----------------SSEVQTFRGHKKEASAVAW 337 (877)
Q Consensus 278 -~~~~~-~~h~~~V~~l~~sp~g~~l~s~s-~Dg~I~iwd~~~~-----------------~~~~~~~~~h~~~v~~i~~ 337 (877)
....+ .+| .....|+|++++.++++-. .|+.-.|.-+... ..++..+..+......|+|
T Consensus 192 ~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~ 270 (347)
T 3das_A 192 PGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAY 270 (347)
T ss_dssp TTCCEEEBCC-SBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEE
T ss_pred CCCeEEeeCC-CCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEE
Confidence 01112 233 3456899999877555532 2322222222211 1123333323235566777
Q ss_pred cCCCCcEEEEEeCCCcEEEEEcCCCcee---EEecCcCCCCEEEEEEcCCCCEEEEEE
Q psy13969 338 HPQHEGLFSSGGADGSIMFWHVGADKEV---GCIPQAHDNIIWTMAWHPLGHILATGS 392 (877)
Q Consensus 338 ~p~~~~~l~sgs~dg~I~iwd~~~~~~~---~~~~~~h~~~V~~v~~sp~g~~l~sg~ 392 (877)
.. +. +|++.-....|....+.....+ ..+.......+.+|+..|||.++++.+
T Consensus 271 ~~-g~-~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 271 AE-GS-VWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp ET-TE-EEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred Ec-Cc-eeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 63 33 5665555566766676554321 223233446789999999887666544
No 307
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.43 E-value=0.14 Score=52.99 Aligned_cols=216 Identities=12% Similarity=0.162 Sum_probs=137.0
Q ss_pred CeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEE
Q psy13969 181 GYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSG 260 (877)
Q Consensus 181 g~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sg 260 (877)
.+|.|.|+.......-+. -.--+...+|..+.||.=. ..+|.|||+++.+.+..+.- ...|..=.|-.+ +.|+..
T Consensus 49 ~~VvIiDl~n~~~~~Rrp--i~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~-~~L~lV 123 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRP--ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVALV 123 (365)
T ss_dssp EEEEEEETTSTTSCEEEE--CCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSS-SEEEEE
T ss_pred CEEEEEECCCCCCccccc--cccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCC-CeEEEE
Confidence 367788865532111111 1112445688888777766 67999999999988888774 456777777644 455555
Q ss_pred ecCCcccEEEEcCCC-CceeEEeccC----CCCeeEEEEccCCCeEEEEeC-------CCeEEEEEcCCCCcceEEEecC
Q psy13969 261 SKDNQQPVKLWDPKA-GQALATLHAH----KSTVMDLAWNQNGNWLVTASR-------DHLLKVFDIRNLSSEVQTFRGH 328 (877)
Q Consensus 261 s~dg~~~I~iwd~~~-~~~~~~~~~h----~~~V~~l~~sp~g~~l~s~s~-------Dg~I~iwd~~~~~~~~~~~~~h 328 (877)
+... |+.|++.. ..++..+.-| ...|..-..+++.++++..+- .|.+.||..+. ...+.+.+|
T Consensus 124 T~ta---VyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er--~~sQ~ieGh 198 (365)
T 2xzh_A 124 TDNA---VYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGH 198 (365)
T ss_dssp ESSE---EEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT--TEEEEECCS
T ss_pred cCCc---EEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc--cccceeeee
Confidence 5443 99999874 3455555444 345777777888888877542 36688999876 556777777
Q ss_pred CCCeEEEEEcCC--CCcEEEEEeCC---CcEEEEEcCCC--------ceeEEec---CcCCCCEEEEEEcCCCCEEEEEE
Q psy13969 329 KKEASAVAWHPQ--HEGLFSSGGAD---GSIMFWHVGAD--------KEVGCIP---QAHDNIIWTMAWHPLGHILATGS 392 (877)
Q Consensus 329 ~~~v~~i~~~p~--~~~~l~sgs~d---g~I~iwd~~~~--------~~~~~~~---~~h~~~V~~v~~sp~g~~l~sg~ 392 (877)
......+.+.-+ ...+|+.+... ++++|.++... +....+. ....+--.++..|+.-.+|+.-+
T Consensus 199 aa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviT 278 (365)
T 2xzh_A 199 AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT 278 (365)
T ss_dssp EEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEE
T ss_pred eeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEe
Confidence 654443333211 12244443332 58999998543 1111111 12244566788888888999999
Q ss_pred cCCeEEEEeCCCCC
Q psy13969 393 NDHASKFWTRNRLG 406 (877)
Q Consensus 393 ~dg~v~iwd~~~~~ 406 (877)
.-|.|++||+.+..
T Consensus 279 K~G~ihlyDleTgt 292 (365)
T 2xzh_A 279 KYGYIHLYDLETGT 292 (365)
T ss_dssp TTSEEEEEETTTCC
T ss_pred CCcEEEEEEcccCc
Confidence 99999999998743
No 308
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.34 E-value=0.1 Score=58.18 Aligned_cols=102 Identities=13% Similarity=0.225 Sum_probs=59.4
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEc---c------CCCCeeEEEEcCC---CCEEEEEEC--------
Q psy13969 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQ---G------HKESIRGISFSPS---DSKFATCSD-------- 220 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~---~------h~~~V~~i~~sp~---~~~l~sgs~-------- 220 (877)
....|+|.+|++++|+-...+.|++++........+. . ....+..|+|+|+ +.+|+++..
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 4567888888887776554457888875433332221 1 2345679999995 555555543
Q ss_pred -----CCcEEEEeccCC-----eeeEE---ec-cCCCCeEEEEEcCCCCEEEEEec
Q psy13969 221 -----DGTVRVWDFYRC-----TEEKV---LR-GHGADVKCVDWHPYKSLIVSGSK 262 (877)
Q Consensus 221 -----Dg~I~iwd~~~~-----~~~~~---l~-~h~~~v~~v~~sp~~~~l~sgs~ 262 (877)
...|..|++... ..... +. ........|+|.+|+.++++.+.
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 235666665321 11111 21 11234789999999987776543
No 309
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.30 E-value=0.034 Score=64.67 Aligned_cols=205 Identities=9% Similarity=0.017 Sum_probs=122.6
Q ss_pred cCCEEEEEEcCCCCEEEEEe-CCCeEEEEeCCCcc--eEEEccCCCCeeEEEEcCCCCEEEEE-ECCCcEEEEeccCCee
Q psy13969 159 DCAVRHMVWSHNGLWMVTSD-HQGYIKYWQSNMNN--VKTFQGHKESIRGISFSPSDSKFATC-SDDGTVRVWDFYRCTE 234 (877)
Q Consensus 159 ~~~V~~l~~spd~~~l~sg~-~dg~v~iwd~~~~~--~~~~~~h~~~V~~i~~sp~~~~l~sg-s~Dg~I~iwd~~~~~~ 234 (877)
-..+..|+|++....|+.++ ..+.|+.++.+... ...+..--.....|++...+..|+.+ ...+.|.+.++.....
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 34577889988666665544 46788888877653 23333333568899999866655555 4568999999865433
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEe-CCCeEEEE
Q psy13969 235 EKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTAS-RDHLLKVF 313 (877)
Q Consensus 235 ~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s-~Dg~I~iw 313 (877)
...+...-.....|+++|...+|+.+.......|...++........+...-.....|+++++...|+.+. ....|..+
T Consensus 119 ~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~ 198 (619)
T 3s94_A 119 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKS 198 (619)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEe
Confidence 33333445567889999987666666543222277777654333333333345678999998766666654 55678888
Q ss_pred EcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeE
Q psy13969 314 DIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVG 366 (877)
Q Consensus 314 d~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~ 366 (877)
|+..... .............|++..+ .++++-...+.|...|..+++...
T Consensus 199 ~~dG~~~-~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~~~~ 248 (619)
T 3s94_A 199 NLDGTNR-QAVVKGSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGEGLR 248 (619)
T ss_dssp SSSCCEE-C---------CCCEEESSS--EEEEECTTTCSEEEEESSSCCCCE
T ss_pred cCCCCcc-EEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEEEECCCCcccE
Confidence 8865222 1122212223346677654 467766667789999987765443
No 310
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.24 E-value=0.06 Score=57.88 Aligned_cols=232 Identities=10% Similarity=0.022 Sum_probs=121.9
Q ss_pred CCeeEEEEcCCCCEEEEEECCCcEEEEeccCCe-eeEEec---cCCCCeEEEEEcCC---CCEEEEEec----C----Cc
Q psy13969 201 ESIRGISFSPSDSKFATCSDDGTVRVWDFYRCT-EEKVLR---GHGADVKCVDWHPY---KSLIVSGSK----D----NQ 265 (877)
Q Consensus 201 ~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~-~~~~l~---~h~~~v~~v~~sp~---~~~l~sgs~----d----g~ 265 (877)
..-+.|+|.++++ |+++..++.|+++|. +++ .+..+. ........|+|+|+ +..|+++.. + ..
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTE-EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCe-EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 3467899999987 555566799999973 444 222111 12346889999997 555554433 2 34
Q ss_pred ccEEEEcCCCC-------cee-EEecc-CCCCeeEEEEccCCCeEEEEeC-------------CCeEEEEEcCCCC----
Q psy13969 266 QPVKLWDPKAG-------QAL-ATLHA-HKSTVMDLAWNQNGNWLVTASR-------------DHLLKVFDIRNLS---- 319 (877)
Q Consensus 266 ~~I~iwd~~~~-------~~~-~~~~~-h~~~V~~l~~sp~g~~l~s~s~-------------Dg~I~iwd~~~~~---- 319 (877)
|..|+.... +.+ ..+.. .......|+|.+|+.++++.+. .+.|.-+|....-
T Consensus 107 --v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 107 --VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp --EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred --EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 777876643 111 11221 1123467999999986666432 1345555543210
Q ss_pred ---cceEEEecCCCCeEEEEEcCCCCcEEEEEeCCC---cEEEEEcCC--------C--------ceeEEecCcCCCCEE
Q psy13969 320 ---SEVQTFRGHKKEASAVAWHPQHEGLFSSGGADG---SIMFWHVGA--------D--------KEVGCIPQAHDNIIW 377 (877)
Q Consensus 320 ---~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg---~I~iwd~~~--------~--------~~~~~~~~~h~~~V~ 377 (877)
.......+|. ....|+|+++...++++-.... .|.+...-. . ..+..+. .......
T Consensus 185 pf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~-~~~~ap~ 262 (354)
T 3a9g_A 185 PFPNSPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTG-SETWAPS 262 (354)
T ss_dssp SSTTCCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT-TCCCCEE
T ss_pred CCCCCcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecC-CCCcCCc
Confidence 0111222333 3467999994333665533222 133322110 0 1112221 1224577
Q ss_pred EEEEc-------CCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEecc
Q psy13969 378 TMAWH-------PLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGM 441 (877)
Q Consensus 378 ~v~~s-------p~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~ 441 (877)
.++|. .++.++++.-..+.|...+++..+....... . +......+.++++.+|+..+++..
T Consensus 263 G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~-~--~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKIST-F--FKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEE-E--CTTTSCCEEEEEECTTSCEEEEEC
T ss_pred ceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceee-e--ccCCCCCeeEEEECCCCcEEEEEe
Confidence 88884 4566777666677888888764322111000 0 001123467788888887666653
No 311
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.15 E-value=0.39 Score=51.77 Aligned_cols=218 Identities=12% Similarity=0.154 Sum_probs=139.0
Q ss_pred CeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEE
Q psy13969 181 GYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSG 260 (877)
Q Consensus 181 g~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sg 260 (877)
.+|.|.|+.......-+. -.--+...+|..+.||.=. ..++.|||+++...+..+.-.. .|..=.|-.+ +.|+..
T Consensus 48 ~~vvIiDl~~~~~~~rrp--i~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~-~~l~lV 122 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRP--ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISL-NTVALV 122 (494)
T ss_dssp CEEEEEETTSTTSCEEEE--CCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEET-TEEEEE
T ss_pred CeEEEEECCCCCcceecc--cccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCC-CeEEEE
Confidence 367777865432111111 1112456678777777665 6799999999988888777444 5555566543 455555
Q ss_pred ecCCcccEEEEcCCC-CceeEEeccC----CCCeeEEEEccCCCeEEEEe-------CCCeEEEEEcCCCCcceEEEecC
Q psy13969 261 SKDNQQPVKLWDPKA-GQALATLHAH----KSTVMDLAWNQNGNWLVTAS-------RDHLLKVFDIRNLSSEVQTFRGH 328 (877)
Q Consensus 261 s~dg~~~I~iwd~~~-~~~~~~~~~h----~~~V~~l~~sp~g~~l~s~s-------~Dg~I~iwd~~~~~~~~~~~~~h 328 (877)
+.. . |+.|++.. ..++..+.-| ...|..-..+++.++++..+ ..|.+.+|..+. ...+.+.+|
T Consensus 123 T~t-a--VyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er--~~sQ~ieGh 197 (494)
T 1bpo_A 123 TDN-A--VYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGH 197 (494)
T ss_dssp CSS-E--EEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT--CCEEEECCS
T ss_pred cCC-e--eEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc--cccchheee
Confidence 544 3 99999974 3455555444 34577777788888887654 246788999876 556778888
Q ss_pred CCCeEEEEEcCC--CCcEEEEEeCC---CcEEEEEcCCC--------ceeEEec---CcCCCCEEEEEEcCCCCEEEEEE
Q psy13969 329 KKEASAVAWHPQ--HEGLFSSGGAD---GSIMFWHVGAD--------KEVGCIP---QAHDNIIWTMAWHPLGHILATGS 392 (877)
Q Consensus 329 ~~~v~~i~~~p~--~~~~l~sgs~d---g~I~iwd~~~~--------~~~~~~~---~~h~~~V~~v~~sp~g~~l~sg~ 392 (877)
......+.+.-+ ...+|+.+... +.++|.++... +....+. ....+--.++..|+.-.+++.-+
T Consensus 198 aa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviT 277 (494)
T 1bpo_A 198 AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT 277 (494)
T ss_dssp EEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEE
T ss_pred eeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEe
Confidence 665554444321 12255555443 68999998543 1111221 12244566788898888999999
Q ss_pred cCCeEEEEeCCCCCCC
Q psy13969 393 NDHASKFWTRNRLGDP 408 (877)
Q Consensus 393 ~dg~v~iwd~~~~~~~ 408 (877)
.-|.|++||+.+....
T Consensus 278 K~G~i~lyDleTgt~i 293 (494)
T 1bpo_A 278 KYGYIHLYDLETGTCI 293 (494)
T ss_dssp TTSEEEEEETTTCCEE
T ss_pred cCceEEEEecccceee
Confidence 9999999999875433
No 312
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.14 E-value=0.016 Score=60.67 Aligned_cols=212 Identities=12% Similarity=0.116 Sum_probs=105.4
Q ss_pred CeEEEEeCCCcceEEEccCCC--CeeEEEEcCCCCEEEEEECC-----CcEEEEeccCCe---eeEE--eccCCCCeEEE
Q psy13969 181 GYIKYWQSNMNNVKTFQGHKE--SIRGISFSPSDSKFATCSDD-----GTVRVWDFYRCT---EEKV--LRGHGADVKCV 248 (877)
Q Consensus 181 g~v~iwd~~~~~~~~~~~h~~--~V~~i~~sp~~~~l~sgs~D-----g~I~iwd~~~~~---~~~~--l~~h~~~v~~v 248 (877)
..+.+||..+..-..+..... .-.+++. .++.+++.++.+ ..+.+||+.+.+ -... +........++
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~ 109 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS-LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGAT 109 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEE-ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEE
Confidence 467888877665444332111 1112222 256677777654 468999987755 2222 22111222233
Q ss_pred EEcCCCCEEEEEecCCc---ccEEEEcCCCCce--eEEeccCCCCeeEEEEccCCCeEEEEeCC-----CeEEEEEcCCC
Q psy13969 249 DWHPYKSLIVSGSKDNQ---QPVKLWDPKAGQA--LATLHAHKSTVMDLAWNQNGNWLVTASRD-----HLLKVFDIRNL 318 (877)
Q Consensus 249 ~~sp~~~~l~sgs~dg~---~~I~iwd~~~~~~--~~~~~~h~~~V~~l~~sp~g~~l~s~s~D-----g~I~iwd~~~~ 318 (877)
.+ ++.+++.++.++. ..+.+||+.+.+- +..+........++.+ ++++++.++.+ ..|.+||+.+.
T Consensus 110 ~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 110 TL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp EE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred EE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCC
Confidence 33 4667777765432 1388999887642 2222211111122222 56677776644 45889998762
Q ss_pred CcceEEEecCC---CCeEEEEEcCCCCcEEEEEeCC-----CcEEEEEcCCCceeEEecCc-CCCCEEEEEEcCCCCEEE
Q psy13969 319 SSEVQTFRGHK---KEASAVAWHPQHEGLFSSGGAD-----GSIMFWHVGADKEVGCIPQA-HDNIIWTMAWHPLGHILA 389 (877)
Q Consensus 319 ~~~~~~~~~h~---~~v~~i~~~p~~~~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~~-h~~~V~~v~~sp~g~~l~ 389 (877)
....+.... ....++.+ + ..+++.|+.+ ..|.+||+.+.+-...-... .......+.+ ++++++
T Consensus 186 --~W~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v 258 (301)
T 2vpj_A 186 --HWTNVTPMATKRSGAGVALL--N-DHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYA 258 (301)
T ss_dssp --EEEEECCCSSCCBSCEEEEE--T-TEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEE
T ss_pred --cEEeCCCCCcccccceEEEE--C-CEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEE
Confidence 222222111 11222222 3 3477777664 46899999876543221111 1111222232 566777
Q ss_pred EEEcCC-----eEEEEeCCC
Q psy13969 390 TGSNDH-----ASKFWTRNR 404 (877)
Q Consensus 390 sg~~dg-----~v~iwd~~~ 404 (877)
.++.++ .|.+||..+
T Consensus 259 ~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 259 IAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp ECCBCSSSBEEEEEEEETTT
T ss_pred EcCcCCCcccccEEEEcCCC
Confidence 776553 466777653
No 313
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.12 E-value=0.029 Score=59.98 Aligned_cols=176 Identities=15% Similarity=0.203 Sum_probs=101.5
Q ss_pred CCCeEEEEeCCCc--ceEE--Ecc-----CCCCeeEEEEcC--CCC-EEEEEEC---CCcEEEEeccCCe----eeEEec
Q psy13969 179 HQGYIKYWQSNMN--NVKT--FQG-----HKESIRGISFSP--SDS-KFATCSD---DGTVRVWDFYRCT----EEKVLR 239 (877)
Q Consensus 179 ~dg~v~iwd~~~~--~~~~--~~~-----h~~~V~~i~~sp--~~~-~l~sgs~---Dg~I~iwd~~~~~----~~~~l~ 239 (877)
.+|.|.++|.+.. .... +.. ..-....|.+.. +++ +|+++.. +.+|.||++.... .+..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6899999997632 2222 222 123566777755 344 4555533 4678888876432 122233
Q ss_pred cC-CCCeEEEEEcCCCCEEEEEec---C------------CcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEE
Q psy13969 240 GH-GADVKCVDWHPYKSLIVSGSK---D------------NQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVT 303 (877)
Q Consensus 240 ~h-~~~v~~v~~sp~~~~l~sgs~---d------------g~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s 303 (877)
+. -...+.+++.+++.++++... | ..+.|+.+|.. + +..+...-..-+.|+||||+++|++
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~-~~~~~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--D-VRVVAEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--C-CEEEEEEESSEEEEEECTTSSEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--e-EEEeecCCcccCcceECCCCCEEEE
Confidence 22 245789999999987776541 1 12236667763 2 2233233445788999999987776
Q ss_pred Ee-CCCeEEEEEcCCCCcc--eEEEecCCCCeEEEEEcC-CCCcEEEEEeCC-CcEEEEEc
Q psy13969 304 AS-RDHLLKVFDIRNLSSE--VQTFRGHKKEASAVAWHP-QHEGLFSSGGAD-GSIMFWHV 359 (877)
Q Consensus 304 ~s-~Dg~I~iwd~~~~~~~--~~~~~~h~~~v~~i~~~p-~~~~~l~sgs~d-g~I~iwd~ 359 (877)
+. ....|+.||+...... ...+ ......-.+++.. ++. +++++..+ ..|..|+.
T Consensus 238 adt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~-lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 238 AELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGD-LWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCC-EEEEEESCHHHHHSCCT
T ss_pred EeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCc-EEEEecCCceEEEEECC
Confidence 65 5788999998742221 1223 2234556788888 476 66655544 24444444
No 314
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.12 E-value=0.034 Score=59.42 Aligned_cols=202 Identities=11% Similarity=0.172 Sum_probs=115.6
Q ss_pred eEEEccCCCCeeEEEEcCCCCEEEEE------------ECCCcEEEEeccCC--ee-eEEecc-----CCCCeEEEEEcC
Q psy13969 193 VKTFQGHKESIRGISFSPSDSKFATC------------SDDGTVRVWDFYRC--TE-EKVLRG-----HGADVKCVDWHP 252 (877)
Q Consensus 193 ~~~~~~h~~~V~~i~~sp~~~~l~sg------------s~Dg~I~iwd~~~~--~~-~~~l~~-----h~~~v~~v~~sp 252 (877)
+..+..-....-+|++.+++..++++ ..+|.|.+||+.+. +. ...+.+ .......|.+..
T Consensus 42 C~~i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~ 121 (355)
T 3sre_A 42 CNLVKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFI 121 (355)
T ss_dssp EEECTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEE
T ss_pred CEEeCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEE
Confidence 33343323345567778776555544 26899999998732 21 112222 123566777755
Q ss_pred --CCC-EEEEEecC-CcccEEEEcCCCCc----eeEEeccC-CCCeeEEEEccCCCeEEEEeC-----------------
Q psy13969 253 --YKS-LIVSGSKD-NQQPVKLWDPKAGQ----ALATLHAH-KSTVMDLAWNQNGNWLVTASR----------------- 306 (877)
Q Consensus 253 --~~~-~l~sgs~d-g~~~I~iwd~~~~~----~~~~~~~h-~~~V~~l~~sp~g~~l~s~s~----------------- 306 (877)
++. +|+++... ...+|.+|++.... .+..+... -...+++.+.+++.++++...
T Consensus 122 d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~ 201 (355)
T 3sre_A 122 DDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLA 201 (355)
T ss_dssp CTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCC
T ss_pred CCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCC
Confidence 343 34444322 12237777765432 22233322 245789999999987777541
Q ss_pred CCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCcee---EEecCcCCCCEEEEEEcC
Q psy13969 307 DHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEV---GCIPQAHDNIIWTMAWHP 383 (877)
Q Consensus 307 Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~---~~~~~~h~~~V~~v~~sp 383 (877)
.+.|..||.. .+..+...-...+.|+|+|+++.++++-+..+.|..|++.....+ ..+ ......-.+++..
T Consensus 202 ~g~vyr~d~~----~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~--~~~g~PDGi~vD~ 275 (355)
T 3sre_A 202 WSFVTYYSPN----DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL--SFDTLVDNISVDP 275 (355)
T ss_dssp CEEEEEECTT----CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE--ECSSEEEEEEECT
T ss_pred ccEEEEEECC----eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE--eCCCCCceEEEeC
Confidence 2345555542 223333333456889999999978888778899999998643222 122 2235567789998
Q ss_pred -CCCEEEEEEcCC-eEEEE
Q psy13969 384 -LGHILATGSNDH-ASKFW 400 (877)
Q Consensus 384 -~g~~l~sg~~dg-~v~iw 400 (877)
+|++.+++..++ .|..|
T Consensus 276 e~G~lwva~~~~g~~v~~~ 294 (355)
T 3sre_A 276 VTGDLWVGCHPNGMRIFFY 294 (355)
T ss_dssp TTCCEEEEEESCHHHHHSC
T ss_pred CCCcEEEEecCCceEEEEE
Confidence 588877776443 34434
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.97 E-value=0.036 Score=58.12 Aligned_cols=220 Identities=6% Similarity=0.057 Sum_probs=108.9
Q ss_pred EEEEEeC--CCeEEEEeCCCcceEEEccCC---CCeeEEEEcCCCCEEEEEECC----CcEEEEeccCCeeeEE--eccC
Q psy13969 173 WMVTSDH--QGYIKYWQSNMNNVKTFQGHK---ESIRGISFSPSDSKFATCSDD----GTVRVWDFYRCTEEKV--LRGH 241 (877)
Q Consensus 173 ~l~sg~~--dg~v~iwd~~~~~~~~~~~h~---~~V~~i~~sp~~~~l~sgs~D----g~I~iwd~~~~~~~~~--l~~h 241 (877)
+++.|+. ...+.+||.....-..+.... ....++.+ ++.+++.++.+ ..+.+||+.+.+-... +...
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 4445543 457888887766544432211 11222222 56677777654 5788999877654332 2111
Q ss_pred CCCeEEEEEcCCCCEEEEEecC-C---cccEEEEcCCCCceeEE--eccCCCCeeEEEEccCCCeEEEEeC---------
Q psy13969 242 GADVKCVDWHPYKSLIVSGSKD-N---QQPVKLWDPKAGQALAT--LHAHKSTVMDLAWNQNGNWLVTASR--------- 306 (877)
Q Consensus 242 ~~~v~~v~~sp~~~~l~sgs~d-g---~~~I~iwd~~~~~~~~~--~~~h~~~V~~l~~sp~g~~l~s~s~--------- 306 (877)
.....++.+ ++.+++.|+.+ . ...+.+||+.+.+-... +........++. -++++++.++.
T Consensus 92 r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 92 RDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp CBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEE
T ss_pred ccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccc
Confidence 122222333 56677777655 1 12388999887642221 111111111222 25566666643
Q ss_pred CCeEEEEEcCCCCcceEEEecCCC--CeEEEEEcCCCCcEEEEEeCC-----CcEEEEEcCCCceeEEecCc-CCCCEEE
Q psy13969 307 DHLLKVFDIRNLSSEVQTFRGHKK--EASAVAWHPQHEGLFSSGGAD-----GSIMFWHVGADKEVGCIPQA-HDNIIWT 378 (877)
Q Consensus 307 Dg~I~iwd~~~~~~~~~~~~~h~~--~v~~i~~~p~~~~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~~-h~~~V~~ 378 (877)
-..+.+||+.+. ....+..... .-.+++.. ++ .+++.|+.+ ..|.+||+.+.+-...-... ......+
T Consensus 168 ~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 243 (306)
T 3ii7_A 168 LNSCEVYDPATE--TWTELCPMIEARKNHGLVFV-KD-KIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKC 243 (306)
T ss_dssp CCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE-TT-EEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEE
T ss_pred cceEEEeCCCCC--eEEECCCccchhhcceEEEE-CC-EEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeE
Confidence 345889998762 2222221111 11122222 33 377776543 46889999876433221111 1112223
Q ss_pred EEEcCCCCEEEEEEcC-----CeEEEEeCCC
Q psy13969 379 MAWHPLGHILATGSND-----HASKFWTRNR 404 (877)
Q Consensus 379 v~~sp~g~~l~sg~~d-----g~v~iwd~~~ 404 (877)
+.+ ++++++.++.+ ..|.+||..+
T Consensus 244 ~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 244 AAV--GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp EEE--TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred EEE--CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 333 56777777754 4577777654
No 316
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.90 E-value=0.68 Score=57.67 Aligned_cols=239 Identities=7% Similarity=-0.003 Sum_probs=132.3
Q ss_pred cCCEEEEEEcCC------CCEEEEEeC-CCeEEEEeCCCcceEEEccC--CCCeeEEEEcC--CCCEEEEEECCCcEEEE
Q psy13969 159 DCAVRHMVWSHN------GLWMVTSDH-QGYIKYWQSNMNNVKTFQGH--KESIRGISFSP--SDSKFATCSDDGTVRVW 227 (877)
Q Consensus 159 ~~~V~~l~~spd------~~~l~sg~~-dg~v~iwd~~~~~~~~~~~h--~~~V~~i~~sp--~~~~l~sgs~Dg~I~iw 227 (877)
...|.|+++.+. .+++|.+.. |++|+|+++..-.......- .....+|.+.. ...+|.++-.||.+..+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 567999999863 368998886 99999999875433332222 22344444432 33578889999998766
Q ss_pred ecc--CCeeeE---EeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeE-EEEccC--CC
Q psy13969 228 DFY--RCTEEK---VLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMD-LAWNQN--GN 299 (877)
Q Consensus 228 d~~--~~~~~~---~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~-l~~sp~--g~ 299 (877)
.+. ++.... .+.+ ..++.-..+...+..-+.++.+.- ..+|..+ ++...+ ......+.+ ..|+.. .+
T Consensus 633 ~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp--~liy~~~-~~l~~s-~l~~~~v~~~~~F~se~~~~ 707 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRP--TVIYSSN-HKLVFS-NVNLKEVNYMCPLNSDGYPD 707 (1158)
T ss_dssp EECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSC--EEEEESS-SSEEEE-EBSSSCCCEEEEECCSSSTT
T ss_pred EEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCC--EEEEEcC-CceEEe-ccChHHhceEeccCcccCCC
Confidence 654 332221 1222 345554445444444444444544 4444433 222211 111223333 345542 23
Q ss_pred eEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeC-----------------------------
Q psy13969 300 WLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGA----------------------------- 350 (877)
Q Consensus 300 ~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~----------------------------- 350 (877)
-|+..+ ++.++|..+............-...+..++++|....+++..+.
T Consensus 708 g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1158)
T 3ei3_A 708 SLALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSS 786 (1158)
T ss_dssp EEEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCC
T ss_pred cEEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccccc
Confidence 455444 45699988765332222222234577888888877744433321
Q ss_pred -------------------CCcEEEEEcCCCceeEEecCcCCCCEEEEE---EcCC-CCEEEEEE----------cCCeE
Q psy13969 351 -------------------DGSIMFWHVGADKEVGCIPQAHDNIIWTMA---WHPL-GHILATGS----------NDHAS 397 (877)
Q Consensus 351 -------------------dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~---~sp~-g~~l~sg~----------~dg~v 397 (877)
-..|++.|-.+.+.+..+.......+.+++ |..+ ..+|++|+ ..|.|
T Consensus 787 ~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri 866 (1158)
T 3ei3_A 787 KLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRI 866 (1158)
T ss_dssp CCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEE
T ss_pred ccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEE
Confidence 023667777776666555434445566655 3333 46888887 34689
Q ss_pred EEEeCC
Q psy13969 398 KFWTRN 403 (877)
Q Consensus 398 ~iwd~~ 403 (877)
++|++.
T Consensus 867 ~vf~v~ 872 (1158)
T 3ei3_A 867 VVFQYS 872 (1158)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999986
No 317
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.81 E-value=0.066 Score=57.71 Aligned_cols=144 Identities=13% Similarity=0.180 Sum_probs=93.0
Q ss_pred cCCCCEEEEEECCCcEEEEeccCCeeeEEeccC----CCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCc-------
Q psy13969 209 SPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGH----GADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQ------- 277 (877)
Q Consensus 209 sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h----~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~------- 277 (877)
+.+++.|+++- ++.||+-++.....-+.++.. -..|..+..+|++++||..+... |.|..+-...
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~---V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNE---IFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSE---EEEEECCTTCSCCCCHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCe---EEEEEecCccccCcccc
Confidence 34566666555 467777777644444444432 23688899999999999886653 7887765221
Q ss_pred -----eeEEecc------CCCCeeEEEEcc---CCCeEEEEeCCCeEEEEEcCCC-CcceEEEe---------cCCCCeE
Q psy13969 278 -----ALATLHA------HKSTVMDLAWNQ---NGNWLVTASRDHLLKVFDIRNL-SSEVQTFR---------GHKKEAS 333 (877)
Q Consensus 278 -----~~~~~~~------h~~~V~~l~~sp---~g~~l~s~s~Dg~I~iwd~~~~-~~~~~~~~---------~h~~~v~ 333 (877)
..+.+.. ....|..+.||| .+..|++-..|++|++||+... ..+. .+. .+...|.
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~ 183 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDIT 183 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEE
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEE
Confidence 1123322 246799999999 4578999999999999999852 2222 332 2235788
Q ss_pred EEEEcCCCCcEEEE-EeCCCcEEEE
Q psy13969 334 AVAWHPQHEGLFSS-GGADGSIMFW 357 (877)
Q Consensus 334 ~i~~~p~~~~~l~s-gs~dg~I~iw 357 (877)
+++|..++-.+++. .+..|.|+-.
T Consensus 184 S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 184 DLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEcCCCcEEEEEecCCCCCEEEE
Confidence 99999976544432 2356666543
No 318
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.80 E-value=0.037 Score=57.86 Aligned_cols=212 Identities=13% Similarity=0.133 Sum_probs=102.7
Q ss_pred CeEEEEeCCCcceEEEccCCCC--eeEEEEcCCCCEEEEEECC-----CcEEEEeccCCeeeEE--eccCCCCeEEEEEc
Q psy13969 181 GYIKYWQSNMNNVKTFQGHKES--IRGISFSPSDSKFATCSDD-----GTVRVWDFYRCTEEKV--LRGHGADVKCVDWH 251 (877)
Q Consensus 181 g~v~iwd~~~~~~~~~~~h~~~--V~~i~~sp~~~~l~sgs~D-----g~I~iwd~~~~~~~~~--l~~h~~~v~~v~~s 251 (877)
..+.+||.....-..+...... -.+++.. ++.+++.++.+ ..+.+||+.+.+-... +........++.+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~- 107 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL- 107 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEE-CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE-
Confidence 3577888776654444221111 1122222 56667776644 3688999876653322 1111112222333
Q ss_pred CCCCEEEEEecCCc---ccEEEEcCCCCceeEE--eccCCCCeeEEEEccCCCeEEEEeC-------CCeEEEEEcCCCC
Q psy13969 252 PYKSLIVSGSKDNQ---QPVKLWDPKAGQALAT--LHAHKSTVMDLAWNQNGNWLVTASR-------DHLLKVFDIRNLS 319 (877)
Q Consensus 252 p~~~~l~sgs~dg~---~~I~iwd~~~~~~~~~--~~~h~~~V~~l~~sp~g~~l~s~s~-------Dg~I~iwd~~~~~ 319 (877)
++.+++.|+.++. ..+.+||+.+.+-... +........++.+ ++++++.++. -..+.+||+.+.
T Consensus 108 -~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~- 183 (302)
T 2xn4_A 108 -NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTN- 183 (302)
T ss_dssp -TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTT-
T ss_pred -CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCC-
Confidence 4667777765542 1377899887642221 1111111122222 5566666543 235888998762
Q ss_pred cceEEEec---CCCCeEEEEEcCCCCcEEEEEeCC-----CcEEEEEcCCCceeEEecCcC-CCCEEEEEEcCCCCEEEE
Q psy13969 320 SEVQTFRG---HKKEASAVAWHPQHEGLFSSGGAD-----GSIMFWHVGADKEVGCIPQAH-DNIIWTMAWHPLGHILAT 390 (877)
Q Consensus 320 ~~~~~~~~---h~~~v~~i~~~p~~~~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~~h-~~~V~~v~~sp~g~~l~s 390 (877)
....+.. ......++.+ + ..+++.|+.+ ..|.+||+.+.+-...-.... ......+.+ ++++++.
T Consensus 184 -~W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~ 257 (302)
T 2xn4_A 184 -EWTYIAEMSTRRSGAGVGVL--N-NLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVV 257 (302)
T ss_dssp -EEEEECCCSSCCBSCEEEEE--T-TEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEE
T ss_pred -cEEECCCCccccccccEEEE--C-CEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEE
Confidence 2222211 1111222222 3 3477777654 368899998765332211111 111112222 5667777
Q ss_pred EEcCC-----eEEEEeCCC
Q psy13969 391 GSNDH-----ASKFWTRNR 404 (877)
Q Consensus 391 g~~dg-----~v~iwd~~~ 404 (877)
++.++ .|.+||..+
T Consensus 258 GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 258 GGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp CCBCSSSBCCCEEEEETTT
T ss_pred CCcCCCcccccEEEEcCCC
Confidence 77553 367777654
No 319
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.74 E-value=1.4 Score=52.40 Aligned_cols=225 Identities=11% Similarity=0.135 Sum_probs=128.5
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEc----cCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCee
Q psy13969 159 DCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQ----GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTE 234 (877)
Q Consensus 159 ~~~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~----~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~ 234 (877)
...|+||.-..++.+-+ +..+| +..||-.. ...+. .....|.+|....++ .|.+++.+| |.+||..+.+.
T Consensus 21 ~n~V~~I~qD~~G~lWi-gT~~G-L~ryDG~~--~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f 94 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWI-GSNKG-LFSYDGYS--TQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRY 94 (758)
T ss_dssp CCCEEEEEECTTSCEEE-EESSC-EEEECSSC--EEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEE
T ss_pred cceEEEEEECCCCCEEE-EECCC-ccccCCCc--eEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEE
Confidence 45678887777765443 44566 45566321 11111 123468888777655 555666655 78999876543
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEec-----cCCCCeeEEEEccCCCeEEEEeCCCe
Q psy13969 235 EKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLH-----AHKSTVMDLAWNQNGNWLVTASRDHL 309 (877)
Q Consensus 235 ~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~-----~h~~~V~~l~~sp~g~~l~s~s~Dg~ 309 (877)
..........|.++... ++ .|.+++.++ |..||..+.+.. .+. .....|.+|....++.+.+ ++.+ -
T Consensus 95 ~~~~~~~~~~i~~i~~~-~g-~lWigt~~G---l~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-G 166 (758)
T 3ott_A 95 EQPETDFPTDVRTMALQ-GD-TLWLGALNG---LYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-G 166 (758)
T ss_dssp CCCSCCCCSCEEEEEEE-TT-EEEEEETTE---EEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEE-EETT-E
T ss_pred ECcccCCCceEEEEEec-CC-cEEEEcCCc---ceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-C
Confidence 32111123357777543 44 566666664 889998766533 331 1234688888887776555 4444 5
Q ss_pred EEEEEcCCCCcceEEEecC------CCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcC
Q psy13969 310 LKVFDIRNLSSEVQTFRGH------KKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHP 383 (877)
Q Consensus 310 I~iwd~~~~~~~~~~~~~h------~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp 383 (877)
|..||.... . +..+... ...|.+|....++.. |..++. +-|..+|..+.+..... ......|.++....
T Consensus 167 l~~~~~~~~-~-~~~~~~~~~~~~~~~~i~~i~~d~~~~~-lWigt~-~Gl~~~~~~~~~~~~~~-~l~~~~i~~i~~d~ 241 (758)
T 3ott_A 167 LCRYIPSNG-K-FEGIPLPVHSSQSNLFVNSLLEDTTRQC-VWIGTE-GYLFQYFPSTGQIKQTE-AFHNNSIKSLALDG 241 (758)
T ss_dssp EEEEETTTT-E-EEEECCCCCTTCSSCCEEEEEEETTTTE-EEEEEE-EEEEEEETTTTEEEEEE-EEEEEEEEEEEECT
T ss_pred HhhCccCCC-c-eEEecCCCccccccceeEEEEEECCCCE-EEEEEC-CCCeEEcCCCCeEEecc-CCCCCeEEEEEEcC
Confidence 778887652 2 2222111 224788887766553 333443 45888888765432211 11234588888888
Q ss_pred CCCEEEEEEcCCeEEEEeCCC
Q psy13969 384 LGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 384 ~g~~l~sg~~dg~v~iwd~~~ 404 (877)
++.+.+. +.+ -|.+++...
T Consensus 242 ~g~lWig-T~~-Gl~~~~~~~ 260 (758)
T 3ott_A 242 NGDLLAG-TDN-GLYVYHNDT 260 (758)
T ss_dssp TCCEEEE-ETT-EEEEECCTT
T ss_pred CCCEEEE-eCC-ceeEEecCC
Confidence 8776654 444 577787653
No 320
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.74 E-value=0.098 Score=54.73 Aligned_cols=210 Identities=7% Similarity=0.059 Sum_probs=118.0
Q ss_pred CCCCEEEEEe--CCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECC--------------CcEEEEeccCC
Q psy13969 169 HNGLWMVTSD--HQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDD--------------GTVRVWDFYRC 232 (877)
Q Consensus 169 pd~~~l~sg~--~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~D--------------g~I~iwd~~~~ 232 (877)
.++.+|+... .++.|+..+.+......+.... +--+++++.+|+.+..+ ..|+..++...
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~~----~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~ 98 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSNDT----AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH 98 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCSCEEEEEEE----EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSC
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCCCEEccCCc----eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCC
Confidence 4566666553 3566777777776666555322 33456788888887653 35777777655
Q ss_pred eeeEEeccCCCCeEEEEEcCCCCEEEEEe--cCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeC-CCe
Q psy13969 233 TEEKVLRGHGADVKCVDWHPYKSLIVSGS--KDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASR-DHL 309 (877)
Q Consensus 233 ~~~~~l~~h~~~v~~v~~sp~~~~l~sgs--~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~-Dg~ 309 (877)
+... +... . +..|++++++|+-.. .++...|+..++.... ...+..+.. +.|+++++.|+..+. ...
T Consensus 99 ~~~~-l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~ 168 (302)
T 3s25_A 99 GSTV-LDPD--P--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQ 168 (302)
T ss_dssp CCEE-EECS--C--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCC
T ss_pred cceE-eecC--C--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCce
Confidence 4332 3211 1 236677888888766 3444347777776433 444444332 456778888887765 567
Q ss_pred EEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCC-CcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEE
Q psy13969 310 LKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGAD-GSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHIL 388 (877)
Q Consensus 310 I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~d-g~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l 388 (877)
|.+.++.... ....+. .... +.++|++..++.+-..+ ..|..-++..... ..+ . ...+ ..|++++.+|
T Consensus 169 Iy~~~l~g~~-~~~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~L-t--~~~~--~~~~~~g~~I 237 (302)
T 3s25_A 169 LYRYDTASQS-EALFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVL-T--EANI--EHYNVYGSLI 237 (302)
T ss_dssp EEEEETTTTE-EEEEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EEC-S--CSCE--EEEEEETTEE
T ss_pred EEEEECCCCC-EEEEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEE-e--CCCc--ceEEECCCEE
Confidence 8888887632 222222 2222 34668888666665433 3566666655442 233 1 2233 3367778877
Q ss_pred EEEEcCCeEEEEeCC
Q psy13969 389 ATGSNDHASKFWTRN 403 (877)
Q Consensus 389 ~sg~~dg~v~iwd~~ 403 (877)
+-++....-.|+.++
T Consensus 238 y~~~~~~~~~i~~~~ 252 (302)
T 3s25_A 238 FYQRGGDNPALCVVK 252 (302)
T ss_dssp EEEECSSSCEEEEEE
T ss_pred EEEECCCCcEEEEEE
Confidence 766433223444443
No 321
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.68 E-value=0.14 Score=55.22 Aligned_cols=144 Identities=15% Similarity=0.128 Sum_probs=92.4
Q ss_pred CCCEEEEEecCCcccEEEEcCCCCceeEEeccC----CCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCC---c-----
Q psy13969 253 YKSLIVSGSKDNQQPVKLWDPKAGQALATLHAH----KSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLS---S----- 320 (877)
Q Consensus 253 ~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h----~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~---~----- 320 (877)
++..|+++- ++. |++.++......+.++.- -..|..+..||+|++||..+ +..|.|..+-... .
T Consensus 31 n~t~i~~a~-~n~--iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 31 NGTRIVFIQ-DNI--IRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp TTTEEEEEE-TTE--EEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred CCCEEEEEE-CCE--EEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 444444443 344 777777644444444432 22688899999999998886 4578998886311 0
Q ss_pred ---ceEEEec------CCCCeEEEEEcCCCCc--EEEEEeCCCcEEEEEcCCCce-eEEec--------CcCCCCEEEEE
Q psy13969 321 ---EVQTFRG------HKKEASAVAWHPQHEG--LFSSGGADGSIMFWHVGADKE-VGCIP--------QAHDNIIWTMA 380 (877)
Q Consensus 321 ---~~~~~~~------h~~~v~~i~~~p~~~~--~l~sgs~dg~I~iwd~~~~~~-~~~~~--------~~h~~~V~~v~ 380 (877)
..+++.- ....|..+.|||.+.. .|++-..|+.|++||+..... ...+. ......|.+++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEE
Confidence 1123332 2467999999997543 677778999999999975221 11221 12336789999
Q ss_pred EcCCCCEEEEEE--cCCeEEEE
Q psy13969 381 WHPLGHILATGS--NDHASKFW 400 (877)
Q Consensus 381 ~sp~g~~l~sg~--~dg~v~iw 400 (877)
|..++-.|.+.+ ..|.|+-.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 999876566655 77777644
No 322
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.68 E-value=0.13 Score=54.16 Aligned_cols=208 Identities=11% Similarity=0.057 Sum_probs=99.3
Q ss_pred EEEEeCCCeEEEEeCCCcceEEEc--cCCCCeeEEEEcCCCCEEEEEEC-----C------CcEEEEeccCCeeeEE--e
Q psy13969 174 MVTSDHQGYIKYWQSNMNNVKTFQ--GHKESIRGISFSPSDSKFATCSD-----D------GTVRVWDFYRCTEEKV--L 238 (877)
Q Consensus 174 l~sg~~dg~v~iwd~~~~~~~~~~--~h~~~V~~i~~sp~~~~l~sgs~-----D------g~I~iwd~~~~~~~~~--l 238 (877)
++.++ ..+.+||..+..-.... .........+...++.+++.++. . ..+.+||..+.+-... +
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 34454 57889997776543221 11122233333447778777773 1 1377888876543221 1
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEecC----C--cccEEEEcCCCCcee--EEeccCCCCeeEEEEccCCCeEEEEeC-C--
Q psy13969 239 RGHGADVKCVDWHPYKSLIVSGSKD----N--QQPVKLWDPKAGQAL--ATLHAHKSTVMDLAWNQNGNWLVTASR-D-- 307 (877)
Q Consensus 239 ~~h~~~v~~v~~sp~~~~l~sgs~d----g--~~~I~iwd~~~~~~~--~~~~~h~~~V~~l~~sp~g~~l~s~s~-D-- 307 (877)
........++.+ ++.+++.|+.+ . ...+.+||+.+.+-. ..+...... .+++. -++++++.++. +
T Consensus 86 p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~ 161 (315)
T 4asc_A 86 PSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG-HTVLS-HMDLVYVIGGKGSDR 161 (315)
T ss_dssp SSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEE-ETTEEEEECCBCTTS
T ss_pred CcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc-eeEEE-ECCEEEEEeCCCCCC
Confidence 111111122222 45666666632 1 123889998876421 111111111 11222 35566677665 2
Q ss_pred ---CeEEEEEcCCCCcceEEEecC---CCCeEEEEEcCCCCcEEEEEeCCC-----cEEEEEcCCCceeEEecCcC-CCC
Q psy13969 308 ---HLLKVFDIRNLSSEVQTFRGH---KKEASAVAWHPQHEGLFSSGGADG-----SIMFWHVGADKEVGCIPQAH-DNI 375 (877)
Q Consensus 308 ---g~I~iwd~~~~~~~~~~~~~h---~~~v~~i~~~p~~~~~l~sgs~dg-----~I~iwd~~~~~~~~~~~~~h-~~~ 375 (877)
..+.+||+.+. ....+... .....++.+ ++ .+++.|+.+. .+.+||+.+.+-...-.... ...
T Consensus 162 ~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~ 236 (315)
T 4asc_A 162 KCLNKMCVYDPKKF--EWKELAPMQTARSLFGATVH--DG-RIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSS 236 (315)
T ss_dssp CBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEE--TT-EEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBS
T ss_pred cccceEEEEeCCCC--eEEECCCCCCchhceEEEEE--CC-EEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccc
Confidence 35889998762 22222211 111122222 33 4777776654 58889987764332211111 111
Q ss_pred EEEEEEcCCCCEEEEEEcC
Q psy13969 376 IWTMAWHPLGHILATGSND 394 (877)
Q Consensus 376 V~~v~~sp~g~~l~sg~~d 394 (877)
...+.+ ++++++.++.+
T Consensus 237 ~~~~~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 237 LSLVSL--VGTLYAIGGFA 253 (315)
T ss_dssp CEEEEE--TTEEEEEEEEE
T ss_pred eeEEEE--CCEEEEECCcc
Confidence 222232 55677777754
No 323
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.64 E-value=0.18 Score=54.01 Aligned_cols=231 Identities=12% Similarity=0.040 Sum_probs=118.2
Q ss_pred CeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEe-------ccCCCCeEEEEEcCC---CCEEEEEecC----C--c
Q psy13969 202 SIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVL-------RGHGADVKCVDWHPY---KSLIVSGSKD----N--Q 265 (877)
Q Consensus 202 ~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l-------~~h~~~v~~v~~sp~---~~~l~sgs~d----g--~ 265 (877)
.-+.|+|.+++++|+++...+.|++++.. +.....+ .........|+|+|+ +..|+++... + .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 45789999999834455678999999853 3321111 112345689999996 4444444321 1 1
Q ss_pred ccEEEEcCCCC--c--eeEE-ecc------CCCCeeEEEEccCCCeEEEEeC-------------CCeEEEEEcCCCC--
Q psy13969 266 QPVKLWDPKAG--Q--ALAT-LHA------HKSTVMDLAWNQNGNWLVTASR-------------DHLLKVFDIRNLS-- 319 (877)
Q Consensus 266 ~~I~iwd~~~~--~--~~~~-~~~------h~~~V~~l~~sp~g~~l~s~s~-------------Dg~I~iwd~~~~~-- 319 (877)
..|..|++... + .... +.. .......|+|.+|+.++++.+. .+.|.-+|....-
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 12666666432 1 1111 111 1122467999999965555433 1356666654310
Q ss_pred ----------cceEEEecCCCCeEEEEEcCCCCcEEEEEeC-CCcEEEEEcCCCc-------------------------
Q psy13969 320 ----------SEVQTFRGHKKEASAVAWHPQHEGLFSSGGA-DGSIMFWHVGADK------------------------- 363 (877)
Q Consensus 320 ----------~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~-dg~I~iwd~~~~~------------------------- 363 (877)
.....-.+| .....++|++....++++-.. ++.=.|.-+..+.
T Consensus 178 ~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEI 256 (353)
T ss_dssp TCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSS
T ss_pred CCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCC
Confidence 111112233 346789999943335554321 1112222221111
Q ss_pred ------eeEEecCcCCCCEEEEEEcC-------CCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeec
Q psy13969 364 ------EVGCIPQAHDNIIWTMAWHP-------LGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEM 430 (877)
Q Consensus 364 ------~~~~~~~~h~~~V~~v~~sp-------~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 430 (877)
.+..+ .+...+..++|.. ++.++++.-..+.|...+++. +..... .. -+......+.++++
T Consensus 257 ~~~~~~P~~~~--~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~-~~~~~~-~~--~~~~~~~rp~~v~~ 330 (353)
T 2g8s_A 257 VAGTEQPVFYW--KDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNG-DKVTED-GR--ILTDRGQRIRDVRT 330 (353)
T ss_dssp CTTSCCCSEEE--SSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEET-TEEEEE-EE--ESGGGCCCEEEEEE
T ss_pred CCCccCCeEEe--CCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCC-CeEeee-EE--cccCCCCceeEEEE
Confidence 11111 2234577788864 466777666777787777753 111111 00 01112235778888
Q ss_pred cCCCCeEEec
Q psy13969 431 ELNDSAVIPG 440 (877)
Q Consensus 431 ~~d~~~l~~~ 440 (877)
.+|+..+++.
T Consensus 331 ~pdG~lyv~t 340 (353)
T 2g8s_A 331 GPDGYLYVLT 340 (353)
T ss_dssp CTTSCEEEEE
T ss_pred CCCCcEEEEE
Confidence 8888877753
No 324
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.63 E-value=0.055 Score=52.81 Aligned_cols=178 Identities=11% Similarity=0.076 Sum_probs=97.8
Q ss_pred CCEEEEEECCCcEEEEeccCCe------eeEEecc-CCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCcee-----
Q psy13969 212 DSKFATCSDDGTVRVWDFYRCT------EEKVLRG-HGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQAL----- 279 (877)
Q Consensus 212 ~~~l~sgs~Dg~I~iwd~~~~~------~~~~l~~-h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~----- 279 (877)
..+|++...| +|++=...+.. ....+-. --..+.+++|+|++.+.++ .++. |+-.+..+....
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~--Ly~~~~~t~~~~~W~~s 78 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDK--IYKGTPPTHDNDNWMGR 78 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTE--EEEESCCCSTTCCHHHH
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCe--EEEECCCCCCccccccc
Confidence 4566777777 55543332222 1112211 1246789999998886666 6666 888887553221
Q ss_pred -EEe-c-cCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcc------eEEEecCCCCeEEEEEcCCCCcEEEEEeC
Q psy13969 280 -ATL-H-AHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSE------VQTFRGHKKEASAVAWHPQHEGLFSSGGA 350 (877)
Q Consensus 280 -~~~-~-~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~------~~~~~~h~~~v~~i~~~p~~~~~l~sgs~ 350 (877)
..+ . +.. ...++.|.+++.+.++ .|+.|+-++--+.... ...-..-=..+.+|.|.|++. |+++ .
T Consensus 79 ~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav-~- 152 (236)
T 1tl2_A 79 AKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAV-H- 152 (236)
T ss_dssp CEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEE-E-
T ss_pred ccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEE-e-
Confidence 111 0 111 1478999999988877 5688877765321111 011111114678999999997 5444 4
Q ss_pred CCcEEEEEcCCCc------eeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 351 DGSIMFWHVGADK------EVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 351 dg~I~iwd~~~~~------~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
|+.++-+..-+.. ....+-...-.....+.|++++.++++. ++ +||....
T Consensus 153 dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g--~~Y~~~~ 208 (236)
T 1tl2_A 153 GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GG--KFYEDYP 208 (236)
T ss_dssp TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TT--EEEEESC
T ss_pred CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CC--eEEecCC
Confidence 7775433322111 1111111222345557799999877766 66 4555433
No 325
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.62 E-value=0.65 Score=49.27 Aligned_cols=235 Identities=11% Similarity=0.065 Sum_probs=121.8
Q ss_pred CCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeE--Ee----ccCCCCeEEEEEcCC---CCEEEEE-e--cCCcc
Q psy13969 199 HKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEK--VL----RGHGADVKCVDWHPY---KSLIVSG-S--KDNQQ 266 (877)
Q Consensus 199 h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~--~l----~~h~~~v~~v~~sp~---~~~l~sg-s--~dg~~ 266 (877)
.-..-+.|+|.|++++|++-...+.|++++...++... .+ .........|+|+|+ +..|++. + .+..
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~- 108 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR- 108 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE-
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE-
Confidence 34456899999999877766558999999865444321 12 123456789999995 3444433 2 2333
Q ss_pred cEEEEcCCCC----------cee-EEec-cCCCCeeEEEEccCCCeEEEEeC-------------CCeEEEEEcCCCC--
Q psy13969 267 PVKLWDPKAG----------QAL-ATLH-AHKSTVMDLAWNQNGNWLVTASR-------------DHLLKVFDIRNLS-- 319 (877)
Q Consensus 267 ~I~iwd~~~~----------~~~-~~~~-~h~~~V~~l~~sp~g~~l~s~s~-------------Dg~I~iwd~~~~~-- 319 (877)
|.-|.+... +.+ ..+. ........|+|.+|+.++++.+. -+.|.-++....-
T Consensus 109 -v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~ 187 (347)
T 3das_A 109 -IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAP 187 (347)
T ss_dssp -EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCT
T ss_pred -EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccC
Confidence 666655431 111 1221 11223567999999987776542 2444444443210
Q ss_pred -----cceEEEecCCCCeEEEEEcCCCCcEEEEE-eCCCcEEEEEcCCCc------------------eeEEecCcCCCC
Q psy13969 320 -----SEVQTFRGHKKEASAVAWHPQHEGLFSSG-GADGSIMFWHVGADK------------------EVGCIPQAHDNI 375 (877)
Q Consensus 320 -----~~~~~~~~h~~~v~~i~~~p~~~~~l~sg-s~dg~I~iwd~~~~~------------------~~~~~~~~h~~~ 375 (877)
.......+|. ....++|++++. ++++- +.|+.-.|--+..+. ++..+ ..+...
T Consensus 188 ~nPf~~~~i~a~G~R-Np~Gla~dp~G~-L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~-~~~~~a 264 (347)
T 3das_A 188 GNPFPGSPVYSYGHR-NVQGLAWDDKQR-LFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQW-STDEAS 264 (347)
T ss_dssp TCSSTTCCEEEBCCS-BCCEEEECTTCC-EEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEE-CTTTCC
T ss_pred CCCCCCCeEEeeCCC-CcceEEECCCCC-EEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEec-CCCCCC
Confidence 1112223443 345799999866 55442 223322232222221 12222 112235
Q ss_pred EEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCCcccccccCCcceeeeeeeeeeccCCCCeEEeccC
Q psy13969 376 IWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMG 442 (877)
Q Consensus 376 V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~g 442 (877)
...|+|. ++.+++..-....|....++..+........ +......+.++...+|+..+++...
T Consensus 265 p~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~---l~~~~gR~~dv~~~pDG~lyv~td~ 327 (347)
T 3das_A 265 PSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAF---LEGEYGRLRTVAPAGGDKLWLVTSN 327 (347)
T ss_dssp EEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEE---STTTSSCEEEEEEEETTEEEEEECT
T ss_pred CcceEEE-cCceeeccccCCEEEEEEecCCceecceEEe---ecCCCCCccEEEECCCCcEEEEEcC
Confidence 6677776 3555555555556665555432110000000 1112345778888888877776543
No 326
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.26 E-value=0.12 Score=54.02 Aligned_cols=222 Identities=10% Similarity=0.104 Sum_probs=106.6
Q ss_pred CCCEEEEEeC----CCeEEEEeCCCcceEEEccCCCC--eeEEEEcCCCCEEEEEEC----C-----CcEEEEeccCCee
Q psy13969 170 NGLWMVTSDH----QGYIKYWQSNMNNVKTFQGHKES--IRGISFSPSDSKFATCSD----D-----GTVRVWDFYRCTE 234 (877)
Q Consensus 170 d~~~l~sg~~----dg~v~iwd~~~~~~~~~~~h~~~--V~~i~~sp~~~~l~sgs~----D-----g~I~iwd~~~~~~ 234 (877)
++.+++.|+. -..+.+||..+..-..+...... -.+++.. ++.+++.++. + ..+.+||+.+.+-
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 4455555553 24678888776654444221111 1122222 5566666654 2 4688899876543
Q ss_pred eEE--eccCCCCeEEEEEcCCCCEEEEEecCCc---ccEEEEcCCCCceeE--EeccCCCCeeEEEEccCCCeEEEEeCC
Q psy13969 235 EKV--LRGHGADVKCVDWHPYKSLIVSGSKDNQ---QPVKLWDPKAGQALA--TLHAHKSTVMDLAWNQNGNWLVTASRD 307 (877)
Q Consensus 235 ~~~--l~~h~~~v~~v~~sp~~~~l~sgs~dg~---~~I~iwd~~~~~~~~--~~~~h~~~V~~l~~sp~g~~l~s~s~D 307 (877)
... +........++.+ ++.+++.|+.+.. ..+.+||+.+.+-.. .+........++.+ ++.+++.++.+
T Consensus 103 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 178 (308)
T 1zgk_A 103 SPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFD 178 (308)
T ss_dssp EECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred eECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCC
Confidence 222 1111122223333 4666666654321 128899988764221 11111111122222 56666666644
Q ss_pred -----CeEEEEEcCCCCcceEEEec---CCCCeEEEEEcCCCCcEEEEEeCC-----CcEEEEEcCCCceeEEecCcC-C
Q psy13969 308 -----HLLKVFDIRNLSSEVQTFRG---HKKEASAVAWHPQHEGLFSSGGAD-----GSIMFWHVGADKEVGCIPQAH-D 373 (877)
Q Consensus 308 -----g~I~iwd~~~~~~~~~~~~~---h~~~v~~i~~~p~~~~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~~h-~ 373 (877)
..+.+||+.+. ....+.. ......++.+ + ..+++.|+.+ ..|.+||+.+.+-...-.... .
T Consensus 179 ~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r 253 (308)
T 1zgk_A 179 GTNRLNSAECYYPERN--EWRMITAMNTIRSGAGVCVL--H-NCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRR 253 (308)
T ss_dssp SSCBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEE--T-TEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCC
T ss_pred CCCcCceEEEEeCCCC--eEeeCCCCCCccccceEEEE--C-CEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCc
Confidence 45888998762 2222211 1111222333 3 3477777654 468999998765332211111 1
Q ss_pred CCEEEEEEcCCCCEEEEEEcCC-----eEEEEeCC
Q psy13969 374 NIIWTMAWHPLGHILATGSNDH-----ASKFWTRN 403 (877)
Q Consensus 374 ~~V~~v~~sp~g~~l~sg~~dg-----~v~iwd~~ 403 (877)
.....+.+ ++++++.++.++ .|.+||..
T Consensus 254 ~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 286 (308)
T 1zgk_A 254 SALGITVH--QGRIYVLGGYDGHTFLDSVECYDPD 286 (308)
T ss_dssp BSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETT
T ss_pred cceEEEEE--CCEEEEEcCcCCCcccceEEEEcCC
Confidence 11122222 456777776443 45666654
No 327
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.16 E-value=0.42 Score=59.21 Aligned_cols=232 Identities=9% Similarity=0.093 Sum_probs=133.9
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccC-CeeeEEeccC--
Q psy13969 165 MVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYR-CTEEKVLRGH-- 241 (877)
Q Consensus 165 l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~-~~~~~~l~~h-- 241 (877)
...+|..+.||.=. ..++.|+|++++...........|.-=.|-.. +.|+..+ +..|+.|++.. ....+.+..|
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~-~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~ 147 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRHSS 147 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCC-CeeEEEc-CCeEEEeccCCCCccHHHHhcchh
Confidence 44566666666443 78999999877543322223445656677643 3444444 45899999964 2344444444
Q ss_pred --CCCeEEEEEcCCCCEEEEEec-------CCcccEEEEcCCCCceeEEeccCCCCeeEEEEcc---CCCeEEEEeC---
Q psy13969 242 --GADVKCVDWHPYKSLIVSGSK-------DNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQ---NGNWLVTASR--- 306 (877)
Q Consensus 242 --~~~v~~v~~sp~~~~l~sgs~-------dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp---~g~~l~s~s~--- 306 (877)
...|..-..+++.++++..+- .|. +.+|.+.... ...+.+|......+...- ....|+.+..
T Consensus 148 L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~--mQLyS~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~ 224 (1630)
T 1xi4_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA--MQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (1630)
T ss_pred cccCeeEEeeeCCCCCeEEEEeeccCCCcccce--eeeeeccccc-chhhhHhHhhhheeccCCCCCCceEEEEEEecCC
Confidence 455666677788886664332 244 8888876543 345566665554444431 1223333322
Q ss_pred CCeEEEEEcCCC--Cc-ce-----EEEec---CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCC
Q psy13969 307 DHLLKVFDIRNL--SS-EV-----QTFRG---HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNI 375 (877)
Q Consensus 307 Dg~I~iwd~~~~--~~-~~-----~~~~~---h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~ 375 (877)
-+.++|.++... .. .. ..+.. -..-..++..++... +++..+.-|.|++||+.++.++..- +....+
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g-~iy~itk~G~~~~~d~~t~~~i~~~-ris~~~ 302 (1630)
T 1xi4_A 225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYMN-RISGET 302 (1630)
T ss_pred CceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccC-EEEEEecCceEEEEecccchhhhhc-cccCCc
Confidence 267999988542 11 11 11111 112234566666655 6666778899999999999887655 344555
Q ss_pred EEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 376 IWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 376 V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
|...+.+....=+++....|.|.--.++.
T Consensus 303 iF~~~~~~~~~g~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 303 IFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred eEEeccCCCCCceEEEcCCceEEEEEEcc
Confidence 66555554444455556777766666654
No 328
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.03 E-value=0.23 Score=52.15 Aligned_cols=173 Identities=9% Similarity=0.060 Sum_probs=81.9
Q ss_pred eEEEEeCCCcceEEEc--cCCCCeeEEEEcCCCCEEEEEEC----CC-------cEEEEeccCCeeeEE--eccCCCCeE
Q psy13969 182 YIKYWQSNMNNVKTFQ--GHKESIRGISFSPSDSKFATCSD----DG-------TVRVWDFYRCTEEKV--LRGHGADVK 246 (877)
Q Consensus 182 ~v~iwd~~~~~~~~~~--~h~~~V~~i~~sp~~~~l~sgs~----Dg-------~I~iwd~~~~~~~~~--l~~h~~~v~ 246 (877)
.+.+||..+..-.... .........+...++.+++.|+. ++ .+.+||..+.+-... +........
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 104 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG 104 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc
Confidence 3778887665533321 11112222233446777777773 11 277888776543322 111111122
Q ss_pred EEEEcCCCCEEEEEecC--Cc---ccEEEEcCCCCceeEEeccCCCC--eeEEEEccCCCeEEEEeC------CCeEEEE
Q psy13969 247 CVDWHPYKSLIVSGSKD--NQ---QPVKLWDPKAGQALATLHAHKST--VMDLAWNQNGNWLVTASR------DHLLKVF 313 (877)
Q Consensus 247 ~v~~sp~~~~l~sgs~d--g~---~~I~iwd~~~~~~~~~~~~h~~~--V~~l~~sp~g~~l~s~s~------Dg~I~iw 313 (877)
++.+ ++.+++.|+.+ +. ..+.+||+.+.+-.. +...... -.+++. .++.+++.++. -..+.+|
T Consensus 105 ~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~y 180 (318)
T 2woz_A 105 LGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSE-VKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIY 180 (318)
T ss_dssp EEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEE-ECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEE
T ss_pred eEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeE-CCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEE
Confidence 2223 46666777654 11 237888988754222 1111110 111222 35666666653 2358899
Q ss_pred EcCCCCcceEEEecC---CCCeEEEEEcCCCCcEEEEEeCC-----CcEEEEEcCCCc
Q psy13969 314 DIRNLSSEVQTFRGH---KKEASAVAWHPQHEGLFSSGGAD-----GSIMFWHVGADK 363 (877)
Q Consensus 314 d~~~~~~~~~~~~~h---~~~v~~i~~~p~~~~~l~sgs~d-----g~I~iwd~~~~~ 363 (877)
|+.+. ....+... .....++.+ ++ .+++.|+.+ ..|.+||+.+.+
T Consensus 181 d~~~~--~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 181 NPKKG--DWKDLAPMKTPRSMFGVAIH--KG-KIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp ETTTT--EEEEECCCSSCCBSCEEEEE--TT-EEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred cCCCC--EEEECCCCCCCcccceEEEE--CC-EEEEEcCcCCCCccceEEEEECCCCe
Confidence 98762 22222211 111122222 33 477777643 357789987764
No 329
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.03 E-value=3.7 Score=48.77 Aligned_cols=226 Identities=14% Similarity=0.107 Sum_probs=128.9
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEc-----cCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeee
Q psy13969 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQ-----GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEE 235 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~-----~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~ 235 (877)
.|.++.. .++. |..++.+ -|.+|+.....+..+. .....|.+|....++.+.+ ++.+ -|..||..+.+..
T Consensus 104 ~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~ 178 (758)
T 3ott_A 104 DVRTMAL-QGDT-LWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFE 178 (758)
T ss_dssp CEEEEEE-ETTE-EEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEE
T ss_pred eEEEEEe-cCCc-EEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceE
Confidence 4777654 3454 4445555 5778887766655552 1235688888887776655 4444 4778887665433
Q ss_pred EEecc-----CCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeE
Q psy13969 236 KVLRG-----HGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLL 310 (877)
Q Consensus 236 ~~l~~-----h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I 310 (877)
..... ....|.++....++..|.+++..+ |..+|..+.+...........|.+|....++.+.+ ++. +-|
T Consensus 179 ~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~G---l~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl 253 (758)
T 3ott_A 179 GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGY---LFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD-NGL 253 (758)
T ss_dssp EECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEE---EEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET-TEE
T ss_pred EecCCCccccccceeEEEEEECCCCEEEEEECCC---CeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC-Cce
Confidence 22111 123488888887777666666543 88999877653322111234588888887776554 444 458
Q ss_pred EEEEcCCCCcceEEEec--------CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEec----CcCCCCEEE
Q psy13969 311 KVFDIRNLSSEVQTFRG--------HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIP----QAHDNIIWT 378 (877)
Q Consensus 311 ~iwd~~~~~~~~~~~~~--------h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~----~~h~~~V~~ 378 (877)
.++|..+ . .+..+.. ....|.+|....++. |..|+..| |.++.....-...... ......|.+
T Consensus 254 ~~~~~~~-~-~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~--lWiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 328 (758)
T 3ott_A 254 YVYHNDT-T-PLQHIIHDSRNIQSLTNNIIWNIFADQEHN--IWLGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYS 328 (758)
T ss_dssp EEECCTT-S-CCEEECCCTTCTTSCSCSCEEEEEECTTCC--EEEEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEE
T ss_pred eEEecCC-C-cEEEEEcCCCCcCcCCcCeEEEEEEcCCCC--EEEEeCCc-ccccccCCceeEEecccCCCCCCCceEEE
Confidence 8888765 2 2233221 224588888777766 44455566 5554332211111110 112346889
Q ss_pred EEEcCCCCEEEEEEcCCeEEEEeCC
Q psy13969 379 MAWHPLGHILATGSNDHASKFWTRN 403 (877)
Q Consensus 379 v~~sp~g~~l~sg~~dg~v~iwd~~ 403 (877)
+.-..++.+.+. +.+| |..++..
T Consensus 329 i~~D~~g~lWiG-t~~G-l~~~~~~ 351 (758)
T 3ott_A 329 LFRDSKGFYWFG-GANG-LIRFTDP 351 (758)
T ss_dssp EEECTTCCEEEE-ETTE-EEEESCT
T ss_pred EEEcCCCCEEEe-eCCc-ceeeccc
Confidence 988888876554 4554 5556543
No 330
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.99 E-value=0.67 Score=51.49 Aligned_cols=227 Identities=10% Similarity=0.089 Sum_probs=131.5
Q ss_pred CCCEEEEEEC-CCcEEEEeccCCeeeEEecc-CCCCeEEEEEc--CCCCEEEEEecCCc-----c-cE-----------E
Q psy13969 211 SDSKFATCSD-DGTVRVWDFYRCTEEKVLRG-HGADVKCVDWH--PYKSLIVSGSKDNQ-----Q-PV-----------K 269 (877)
Q Consensus 211 ~~~~l~sgs~-Dg~I~iwd~~~~~~~~~l~~-h~~~v~~v~~s--p~~~~l~sgs~dg~-----~-~I-----------~ 269 (877)
|+++|+.-.. +..|...++...++-..+.. ....+..++|. |+..|++.++.... + .+ .
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~ 220 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYN 220 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEE
T ss_pred eeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEE
Confidence 5677877764 66888899988887766653 45678888886 57778887765431 0 01 1
Q ss_pred EEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCC---------------eEEEEEcCC------------CC-cc
Q psy13969 270 LWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDH---------------LLKVFDIRN------------LS-SE 321 (877)
Q Consensus 270 iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg---------------~I~iwd~~~------------~~-~~ 321 (877)
..|..+.+....+.. ......+..++++.+.++.|.+. .|.++++.. .. .-
T Consensus 221 ~iD~~tm~v~~Qv~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~g 299 (638)
T 3sbq_A 221 AIDAETMEMAFQVIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSK 299 (638)
T ss_dssp EEETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCC
T ss_pred EEcCCccEEEEEEEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCC
Confidence 112222222222111 22333455567778887776531 244554321 00 00
Q ss_pred eEEEec---------------CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCce-------------eEEecCcCC
Q psy13969 322 VQTFRG---------------HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKE-------------VGCIPQAHD 373 (877)
Q Consensus 322 ~~~~~~---------------h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~-------------~~~~~~~h~ 373 (877)
+..+.. -......+.++|++.++++++-.+.+|.|+|+..... +... .-.
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~--e~G 377 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP--ELG 377 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC--BCC
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec--cCC
Confidence 112211 1223446889999998888888899999999974211 1122 234
Q ss_pred CCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCC-----CC---CcccccccCCcceeeeeeeeeeccCCCCeEEec
Q psy13969 374 NIIWTMAWHPLGHILATGSNDHASKFWTRNRL-----GD---PMRDRYNQKGLAHCITGVYNEEMELNDSAVIPG 440 (877)
Q Consensus 374 ~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~-----~~---~~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~ 440 (877)
......+|.++|....|.-.|..|..|++... ++ .+..+.....-..|..........+|+.+|++.
T Consensus 378 lGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 378 LGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp SCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred CcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEe
Confidence 56788999999965666668999999998642 11 122222222233444444444556677777664
No 331
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.95 E-value=0.057 Score=52.73 Aligned_cols=145 Identities=12% Similarity=0.105 Sum_probs=84.0
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCcceEEEccCCCC--------eeEEEEcCCCCEEEEEECCCcEEEEeccCC
Q psy13969 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKES--------IRGISFSPSDSKFATCSDDGTVRVWDFYRC 232 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~~~~~~~~h~~~--------V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~ 232 (877)
.+++++|+|++.+.++ .++.++-.+..+..-..+...... -.++.|.+++.+.++ .|+.|.-++-.+.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 5668999998886665 677766666533211111111222 378999999988777 5699988875322
Q ss_pred eee------EEe-ccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCc------eeEEe-ccCCCCeeEEEEccCC
Q psy13969 233 TEE------KVL-RGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQ------ALATL-HAHKSTVMDLAWNQNG 298 (877)
Q Consensus 233 ~~~------~~l-~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~------~~~~~-~~h~~~V~~l~~sp~g 298 (877)
... ..+ ..--..+.+|.|.|++.+.++. |+. ++-+..-+.. ....+ .........+.|.+++
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~--lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G 193 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ--FYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVG 193 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTE--EEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTS
T ss_pred CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCc--EEecCCCCCCCcccccccceeccCCcceEEEEEECCCC
Confidence 111 111 1112467999999999988776 765 5443332211 11111 1223344557788888
Q ss_pred CeEEEEeCCCeEEEEEcCC
Q psy13969 299 NWLVTASRDHLLKVFDIRN 317 (877)
Q Consensus 299 ~~l~s~s~Dg~I~iwd~~~ 317 (877)
.++++. ++ +||-...
T Consensus 194 ~l~~v~--~g--~~Y~~~~ 208 (236)
T 1tl2_A 194 TLFGVQ--GG--KFYEDYP 208 (236)
T ss_dssp CEEEEE--TT--EEEEESC
T ss_pred cEEEEe--CC--eEEecCC
Confidence 777666 66 4454443
No 332
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.95 E-value=1.7 Score=54.10 Aligned_cols=215 Identities=7% Similarity=0.009 Sum_probs=115.9
Q ss_pred CEEEEEeCCCeEEEEeCCCcceEEE--ccCCCCeeEEEEcCC------CCEEEEEEC-CCcEEEEeccCCeeeEEeccC-
Q psy13969 172 LWMVTSDHQGYIKYWQSNMNNVKTF--QGHKESIRGISFSPS------DSKFATCSD-DGTVRVWDFYRCTEEKVLRGH- 241 (877)
Q Consensus 172 ~~l~sg~~dg~v~iwd~~~~~~~~~--~~h~~~V~~i~~sp~------~~~l~sgs~-Dg~I~iwd~~~~~~~~~l~~h- 241 (877)
.+++.++ .+.+.++.++...+... ......|.|+++.+. ..++|++.. |++|+|+++.+.+.+....-.
T Consensus 524 ~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~ 602 (1158)
T 3ei3_A 524 SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG 602 (1158)
T ss_dssp SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS
T ss_pred CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCC
Confidence 3455554 56777776543322211 223567999999763 468999997 999999999876655433221
Q ss_pred CCCeEEEEEcC--CCCEEEEEecCCcccEEE--EcCCCCceeEE--eccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEc
Q psy13969 242 GADVKCVDWHP--YKSLIVSGSKDNQQPVKL--WDPKAGQALAT--LHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDI 315 (877)
Q Consensus 242 ~~~v~~v~~sp--~~~~l~sgs~dg~~~I~i--wd~~~~~~~~~--~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~ 315 (877)
.....+|.+.. ...+|.++-.||. +.. +|..++..... ...-..++.-..+...+..-+.++.+....+|..
T Consensus 603 ~~~p~si~l~~~~~~~~L~igl~dG~--l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~ 680 (1158)
T 3ei3_A 603 EIIPRSILMTTFESSHYLLCALGDGA--LFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSS 680 (1158)
T ss_dssp SCCEEEEEEEEETTEEEEEEEETTSE--EEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEES
T ss_pred CCCCcEEEEEEeCCCcEEEEEeCCCe--EEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEc
Confidence 12344444332 2357888989987 543 45445543322 1122345554445444444444444555555543
Q ss_pred CCCCcceEEEecCCCCe-EEEEEcCCC-CcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEc
Q psy13969 316 RNLSSEVQTFRGHKKEA-SAVAWHPQH-EGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSN 393 (877)
Q Consensus 316 ~~~~~~~~~~~~h~~~v-~~i~~~p~~-~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~ 393 (877)
.. ....+ .-.-..+ ....|+... ..-|+.. .++.++|..+.....+......-...+..++++++.+.++.+..
T Consensus 681 ~~--~l~~s-~l~~~~v~~~~~F~se~~~~g~v~~-~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~ 756 (1158)
T 3ei3_A 681 NH--KLVFS-NVNLKEVNYMCPLNSDGYPDSLALA-NNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSS 756 (1158)
T ss_dssp SS--SEEEE-EBSSSCCCEEEEECCSSSTTEEEEE-CSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEE
T ss_pred CC--ceEEe-ccChHHhceEeccCcccCCCcEEEE-cCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEE
Confidence 32 22211 1112233 334554432 1233333 35669998886543332221234567899999998876665553
No 333
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.85 E-value=0.18 Score=52.68 Aligned_cols=183 Identities=11% Similarity=0.129 Sum_probs=92.4
Q ss_pred CCCEEEEEeCC----CeEEEEeCCCcceEEEccCCC---CeeEEEEcCCCCEEEEEECC------CcEEEEeccCCeeeE
Q psy13969 170 NGLWMVTSDHQ----GYIKYWQSNMNNVKTFQGHKE---SIRGISFSPSDSKFATCSDD------GTVRVWDFYRCTEEK 236 (877)
Q Consensus 170 d~~~l~sg~~d----g~v~iwd~~~~~~~~~~~h~~---~V~~i~~sp~~~~l~sgs~D------g~I~iwd~~~~~~~~ 236 (877)
++.+++.|+.+ ..+.+||..+..-..+..... ...++.+ ++.+++.++.+ ..+.+||+.+.+-..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 55666666644 678888877765444432111 1122222 56677777654 468899987765433
Q ss_pred E--eccCCCCeEEEEEcCCCCEEEEEecCC-------cccEEEEcCCCCceeEEeccCC-C-CeeEEEEccCCCeEEEEe
Q psy13969 237 V--LRGHGADVKCVDWHPYKSLIVSGSKDN-------QQPVKLWDPKAGQALATLHAHK-S-TVMDLAWNQNGNWLVTAS 305 (877)
Q Consensus 237 ~--l~~h~~~v~~v~~sp~~~~l~sgs~dg-------~~~I~iwd~~~~~~~~~~~~h~-~-~V~~l~~sp~g~~l~s~s 305 (877)
. +........++.+ ++++++.++.+. ...+.+||+.+.+-. .+.... . .-.+++.. ++++++.++
T Consensus 133 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~-~~~i~v~GG 208 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT-ELCPMIEARKNHGLVFV-KDKIFAVGG 208 (306)
T ss_dssp ECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEE-EECCCSSCCBSCEEEEE-TTEEEEECC
T ss_pred CCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEE-ECCCccchhhcceEEEE-CCEEEEEeC
Confidence 2 1111111222222 456666665322 123889999876422 221111 1 11122222 556666665
Q ss_pred CC-----CeEEEEEcCCCCcceEEEec---CCCCeEEEEEcCCCCcEEEEEeCC-----CcEEEEEcCCCc
Q psy13969 306 RD-----HLLKVFDIRNLSSEVQTFRG---HKKEASAVAWHPQHEGLFSSGGAD-----GSIMFWHVGADK 363 (877)
Q Consensus 306 ~D-----g~I~iwd~~~~~~~~~~~~~---h~~~v~~i~~~p~~~~~l~sgs~d-----g~I~iwd~~~~~ 363 (877)
.+ ..|.+||+.+. ....+.. ......++.+ + ..+++.++.+ ..|.+||+.+.+
T Consensus 209 ~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 209 QNGLGGLDNVEYYDIKLN--EWKMVSPMPWKGVTVKCAAV--G-SIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EETTEEBCCEEEEETTTT--EEEECCCCSCCBSCCEEEEE--T-TEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred CCCCCCCceEEEeeCCCC--cEEECCCCCCCccceeEEEE--C-CEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 43 35889998762 2222211 1112223333 3 3477777754 457778876654
No 334
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.80 E-value=0.85 Score=47.48 Aligned_cols=139 Identities=11% Similarity=0.042 Sum_probs=85.4
Q ss_pred EEcCCCCEEEEEe----CCCeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEEC-CCcEEEEeccCCeeeEEecc
Q psy13969 166 VWSHNGLWMVTSD----HQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSD-DGTVRVWDFYRCTEEKVLRG 240 (877)
Q Consensus 166 ~~spd~~~l~sg~----~dg~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~-Dg~I~iwd~~~~~~~~~l~~ 240 (877)
.|++++++|+..+ ....|+..+++......+..+.. ++|+++++.|+-.+. ..+|.+.++........+..
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~ 185 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC 185 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC
Confidence 6777888888765 34455555677766666666543 345667888876665 57888888876554444332
Q ss_pred CCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeC--CCeEEEEEcCC
Q psy13969 241 HGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASR--DHLLKVFDIRN 317 (877)
Q Consensus 241 h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~--Dg~I~iwd~~~ 317 (877)
.. .+.++|++.+|+-........|..-++.... ...|.. ..+ ..|++++.+|+.++. ...|...++.-
T Consensus 186 ---~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 186 ---NC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp ---CE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC--SCE--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred ---Cc-cceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC--CCc--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 22 2345688888876665432237777776544 334432 233 347788888887643 35566666654
No 335
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.79 E-value=0.19 Score=52.24 Aligned_cols=183 Identities=14% Similarity=0.120 Sum_probs=92.3
Q ss_pred CCCEEEEEeCC-----CeEEEEeCCCcc---eEEEccCC---CCeeEEEEcCCCCEEEEEECC-----CcEEEEeccCCe
Q psy13969 170 NGLWMVTSDHQ-----GYIKYWQSNMNN---VKTFQGHK---ESIRGISFSPSDSKFATCSDD-----GTVRVWDFYRCT 233 (877)
Q Consensus 170 d~~~l~sg~~d-----g~v~iwd~~~~~---~~~~~~h~---~~V~~i~~sp~~~~l~sgs~D-----g~I~iwd~~~~~ 233 (877)
++.+++.|+.+ ..+.+||..+.. -..+.... ....++.+ ++.+++.++.+ ..+.+||+.+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 45666666544 468889977665 44443211 11122222 56666666543 368899987655
Q ss_pred eeEE--eccCCCCeEEEEEcCCCCEEEEEecCCc---ccEEEEcCCCCceeEE--eccCCCCeeEEEEccCCCeEEEEeC
Q psy13969 234 EEKV--LRGHGADVKCVDWHPYKSLIVSGSKDNQ---QPVKLWDPKAGQALAT--LHAHKSTVMDLAWNQNGNWLVTASR 306 (877)
Q Consensus 234 ~~~~--l~~h~~~v~~v~~sp~~~~l~sgs~dg~---~~I~iwd~~~~~~~~~--~~~h~~~V~~l~~sp~g~~l~s~s~ 306 (877)
-... +........++.+ ++++++.|+.++. ..|.+||+.+.+-... +........++.+ ++.+++.++.
T Consensus 140 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~ 215 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGF 215 (301)
T ss_dssp EEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred EEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCC
Confidence 3322 2211122222333 5667777765431 2388999887643221 1111111122222 5666777665
Q ss_pred C-----CeEEEEEcCCCCcceEEEecC---CCCeEEEEEcCCCCcEEEEEeCC-----CcEEEEEcCCCc
Q psy13969 307 D-----HLLKVFDIRNLSSEVQTFRGH---KKEASAVAWHPQHEGLFSSGGAD-----GSIMFWHVGADK 363 (877)
Q Consensus 307 D-----g~I~iwd~~~~~~~~~~~~~h---~~~v~~i~~~p~~~~~l~sgs~d-----g~I~iwd~~~~~ 363 (877)
+ ..|.+||+.+. ....+... .....++.+ ++. +++.++.+ ..|.+||+.+.+
T Consensus 216 ~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 216 DGTAHLSSVEAYNIRTD--SWTTVTSMTTPRCYVGATVL--RGR-LYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CSSSBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCCcccceEEEEeCCCC--cEEECCCCCCcccceeEEEE--CCE-EEEEcCcCCCcccccEEEEcCCCCe
Confidence 3 46899998762 22222211 111222222 333 67777655 356777876654
No 336
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.46 E-value=0.25 Score=51.40 Aligned_cols=183 Identities=15% Similarity=0.187 Sum_probs=91.6
Q ss_pred CCCEEEEEeCC-----CeEEEEeCCCcceEEEccCCC---CeeEEEEcCCCCEEEEEECCC-----cEEEEeccCCeeeE
Q psy13969 170 NGLWMVTSDHQ-----GYIKYWQSNMNNVKTFQGHKE---SIRGISFSPSDSKFATCSDDG-----TVRVWDFYRCTEEK 236 (877)
Q Consensus 170 d~~~l~sg~~d-----g~v~iwd~~~~~~~~~~~h~~---~V~~i~~sp~~~~l~sgs~Dg-----~I~iwd~~~~~~~~ 236 (877)
++.+++.|+.+ ..+.+||..+..-..+..... ...++.+ ++.+++.++.++ .+.+||+.+.+-..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 55566666543 458888877765544432111 1122222 566777776543 57888887655333
Q ss_pred E--eccCCCCeEEEEEcCCCCEEEEEecCCc-----ccEEEEcCCCCceeEE--eccCCCCeeEEEEccCCCeEEEEeCC
Q psy13969 237 V--LRGHGADVKCVDWHPYKSLIVSGSKDNQ-----QPVKLWDPKAGQALAT--LHAHKSTVMDLAWNQNGNWLVTASRD 307 (877)
Q Consensus 237 ~--l~~h~~~v~~v~~sp~~~~l~sgs~dg~-----~~I~iwd~~~~~~~~~--~~~h~~~V~~l~~sp~g~~l~s~s~D 307 (877)
. +........++.+ ++++++.|+.+.. ..+.+||+.+.+-... +........++.+ ++.+++.++.+
T Consensus 139 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 214 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHD 214 (302)
T ss_dssp ECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBS
T ss_pred cCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCC
Confidence 2 1111112222222 4566666654321 2388999887642221 1111111122222 56677777654
Q ss_pred -----CeEEEEEcCCCCcceEEEecCC---CCeEEEEEcCCCCcEEEEEeCCC-----cEEEEEcCCCc
Q psy13969 308 -----HLLKVFDIRNLSSEVQTFRGHK---KEASAVAWHPQHEGLFSSGGADG-----SIMFWHVGADK 363 (877)
Q Consensus 308 -----g~I~iwd~~~~~~~~~~~~~h~---~~v~~i~~~p~~~~~l~sgs~dg-----~I~iwd~~~~~ 363 (877)
..|.+||+.+. ....+.... ....++.+ ++ .+++.|+.++ .|.+||+.+.+
T Consensus 215 ~~~~~~~~~~yd~~~~--~W~~~~~~~~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 215 GPLVRKSVEVYDPTTN--AWRQVADMNMCRRNAGVCAV--NG-LLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp SSSBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCcccceEEEEeCCCC--CEeeCCCCCCccccCeEEEE--CC-EEEEECCcCCCcccccEEEEcCCCCe
Confidence 35889998762 222222111 11122222 33 3777776553 47888887654
No 337
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.44 E-value=4 Score=45.50 Aligned_cols=220 Identities=10% Similarity=0.118 Sum_probs=122.3
Q ss_pred CCCEEEEEe-CCCeEEEEeCCCcceEEE--ccCCCCeeEEEEc--CCCCEEEEEEC-------CCcE---------EE--
Q psy13969 170 NGLWMVTSD-HQGYIKYWQSNMNNVKTF--QGHKESIRGISFS--PSDSKFATCSD-------DGTV---------RV-- 226 (877)
Q Consensus 170 d~~~l~sg~-~dg~v~iwd~~~~~~~~~--~~h~~~V~~i~~s--p~~~~l~sgs~-------Dg~I---------~i-- 226 (877)
|++||+.-+ .+..|-..+++.-+...+ ......+..++|. |+..|+++.+. |+.. .+
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~ 220 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYN 220 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEE
T ss_pred eeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEE
Confidence 567777655 455666666655333322 2345678888886 57778888775 3321 11
Q ss_pred -EeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCc-------------ccEEEEc--------------------
Q psy13969 227 -WDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQ-------------QPVKLWD-------------------- 272 (877)
Q Consensus 227 -wd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~-------------~~I~iwd-------------------- 272 (877)
.|..+.+....+.. ......+...+++.+.++.|.+.. -.|.++|
T Consensus 221 ~iD~~tm~v~~Qv~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~g 299 (638)
T 3sbq_A 221 AIDAETMEMAFQVIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSK 299 (638)
T ss_dssp EEETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCC
T ss_pred EEcCCccEEEEEEEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCC
Confidence 12222222222111 122334455677888887776532 0133443
Q ss_pred -----CCC----CceeEEeccCCCCeeEEEEccCCCeEEEEe-CCCeEEEEEcCCCCc-----------ceEEEecCCCC
Q psy13969 273 -----PKA----GQALATLHAHKSTVMDLAWNQNGNWLVTAS-RDHLLKVFDIRNLSS-----------EVQTFRGHKKE 331 (877)
Q Consensus 273 -----~~~----~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s-~Dg~I~iwd~~~~~~-----------~~~~~~~h~~~ 331 (877)
.+. +..+..+..-......+.++|||+++++++ .+-+|.|+|++.... .+.....-...
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlG 379 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLG 379 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSC
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCc
Confidence 332 111111111223445688999999988876 577899999884211 11111112345
Q ss_pred eEEEEEcCCCCcEEEEEeCCCcEEEEEcCCC----------ceeEEecCcCCCCEEEEEE------cCCCCEEEEEEc
Q psy13969 332 ASAVAWHPQHEGLFSSGGADGSIMFWHVGAD----------KEVGCIPQAHDNIIWTMAW------HPLGHILATGSN 393 (877)
Q Consensus 332 v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~----------~~~~~~~~~h~~~V~~v~~------sp~g~~l~sg~~ 393 (877)
....+|.+++ +.+.|-..|..|.-|++... ..+..+ ..|-. +-.+.- .++|++|++...
T Consensus 380 PlHt~Fd~~G-~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~-dv~Yq-pGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 380 PLHTTFDGRG-NAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKL-DVHYQ-PGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEEEEECSSS-EEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEE-ECSSC-EEEEEETTTTSTTCCSCEEEEEES
T ss_pred ccEEEECCCC-ceEeeeeecceEEEEeccHHHHHhcCccCCeeeecc-ccccC-CcccccCCCccCCCCccEEEEecc
Confidence 5678999988 47777778999999999643 233333 33432 222322 567888888763
No 338
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.41 E-value=0.5 Score=58.57 Aligned_cols=221 Identities=11% Similarity=0.145 Sum_probs=131.1
Q ss_pred CeEEEEeCCCcceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEE
Q psy13969 181 GYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSG 260 (877)
Q Consensus 181 g~v~iwd~~~~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sg 260 (877)
.+|.|.|+......+- ..-.--+...+|..+.||.=+ ..++.|||+++...+..+.- ...|..=.|-.. +.|+..
T Consensus 48 ~~vvIidl~~~~~~~r--rpi~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~-~~l~lV 122 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIR--RPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVALV 122 (1630)
T ss_pred ceEEEEECCCCCCccc--ccccchhhccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCC-CeeEEE
Confidence 3677777654321111 111112345577776666554 67999999998877776653 345666667644 345444
Q ss_pred ecCCcccEEEEcCCC-CceeEEeccC----CCCeeEEEEccCCCeEEEEe-------CCCeEEEEEcCCCCcceEEEecC
Q psy13969 261 SKDNQQPVKLWDPKA-GQALATLHAH----KSTVMDLAWNQNGNWLVTAS-------RDHLLKVFDIRNLSSEVQTFRGH 328 (877)
Q Consensus 261 s~dg~~~I~iwd~~~-~~~~~~~~~h----~~~V~~l~~sp~g~~l~s~s-------~Dg~I~iwd~~~~~~~~~~~~~h 328 (877)
+... |+.|++.. ..++..+.-| ...|..-..+++.++++..+ ..|.+.+|.+.. ...+.+.+|
T Consensus 123 T~~a---VyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er--~~sQ~iegh 197 (1630)
T 1xi4_A 123 TDNA---VYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGH 197 (1630)
T ss_pred cCCe---EEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc--ccchhhhHh
Confidence 4433 99999964 2333344333 45677777788888887654 357789998875 444556666
Q ss_pred CCCeEEEEEc--CCCCcEEEEEeC---CCcEEEEEcCCC---c-----eeEEecC---cCCCCEEEEEEcCCCCEEEEEE
Q psy13969 329 KKEASAVAWH--PQHEGLFSSGGA---DGSIMFWHVGAD---K-----EVGCIPQ---AHDNIIWTMAWHPLGHILATGS 392 (877)
Q Consensus 329 ~~~v~~i~~~--p~~~~~l~sgs~---dg~I~iwd~~~~---~-----~~~~~~~---~h~~~V~~v~~sp~g~~l~sg~ 392 (877)
......+... +....+|+.+.. .+.++|.++... . ....+.. ....-..++..|+.-.+++..+
T Consensus 198 a~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~it 277 (1630)
T 1xi4_A 198 AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT 277 (1630)
T ss_pred HhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEe
Confidence 6554444332 122224443322 268999988543 1 1111111 1123345677788778899999
Q ss_pred cCCeEEEEeCCCCCCCccc
Q psy13969 393 NDHASKFWTRNRLGDPMRD 411 (877)
Q Consensus 393 ~dg~v~iwd~~~~~~~~~~ 411 (877)
.-|.|++||+.+.......
T Consensus 278 k~G~~~~~d~~t~~~i~~~ 296 (1630)
T 1xi4_A 278 KYGYIHLYDLETGTCIYMN 296 (1630)
T ss_pred cCceEEEEecccchhhhhc
Confidence 9999999999886554433
No 339
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.16 E-value=0.33 Score=50.90 Aligned_cols=144 Identities=13% Similarity=0.136 Sum_probs=71.6
Q ss_pred CCCCEEEEEeC-----C------CeEEEEeCCCcceEEEccCCCCe--eEEEEcCCCCEEEEEECC--------CcEEEE
Q psy13969 169 HNGLWMVTSDH-----Q------GYIKYWQSNMNNVKTFQGHKESI--RGISFSPSDSKFATCSDD--------GTVRVW 227 (877)
Q Consensus 169 pd~~~l~sg~~-----d------g~v~iwd~~~~~~~~~~~h~~~V--~~i~~sp~~~~l~sgs~D--------g~I~iw 227 (877)
.++.+++.|+. . ..+.+||..+..-..+.....+. .+++.. ++.+++.++.+ ..+.+|
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~ 122 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCY 122 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEE
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEE
Confidence 46666666663 1 23777887765544432211111 122222 55666666632 468899
Q ss_pred eccCCeeeEE--eccCCCCeEEEEEcCCCCEEEEEec-CCc---ccEEEEcCCCCceeE--EeccCCCCeeEEEEccCCC
Q psy13969 228 DFYRCTEEKV--LRGHGADVKCVDWHPYKSLIVSGSK-DNQ---QPVKLWDPKAGQALA--TLHAHKSTVMDLAWNQNGN 299 (877)
Q Consensus 228 d~~~~~~~~~--l~~h~~~v~~v~~sp~~~~l~sgs~-dg~---~~I~iwd~~~~~~~~--~~~~h~~~V~~l~~sp~g~ 299 (877)
|+.+.+-... +........++. -++++++.|+. +.. ..+.+||+.+.+-.. .+........++.+ +++
T Consensus 123 d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~ 198 (315)
T 4asc_A 123 DRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGR 198 (315)
T ss_dssp ETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTE
T ss_pred CCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCE
Confidence 9877543221 111111222222 24566777765 211 138899988754211 11111111122222 567
Q ss_pred eEEEEeCCC-----eEEEEEcCC
Q psy13969 300 WLVTASRDH-----LLKVFDIRN 317 (877)
Q Consensus 300 ~l~s~s~Dg-----~I~iwd~~~ 317 (877)
+++.++.+. .+.+||+.+
T Consensus 199 iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 199 IIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp EEEEEEECSSSEEEEEEEEETTT
T ss_pred EEEEeccCCCCccceEEEEECCC
Confidence 777776544 488888876
No 340
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.09 E-value=1.3 Score=49.18 Aligned_cols=105 Identities=10% Similarity=0.091 Sum_probs=60.9
Q ss_pred CCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeE--Eecc------CCCCeEEEEEcCC---CCEEEEEecC------
Q psy13969 201 ESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEK--VLRG------HGADVKCVDWHPY---KSLIVSGSKD------ 263 (877)
Q Consensus 201 ~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~--~l~~------h~~~v~~v~~sp~---~~~l~sgs~d------ 263 (877)
...++|+|.++++++++-...+.|++++..++.... .+.. ....+..|+|+|+ +..|+++...
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 456799999999877765444578888765443322 2221 2345679999995 5555444321
Q ss_pred -C----cccEEEEcCCCC-------ceeE-Eecc-CCCCeeEEEEccCCCeEEEEe
Q psy13969 264 -N----QQPVKLWDPKAG-------QALA-TLHA-HKSTVMDLAWNQNGNWLVTAS 305 (877)
Q Consensus 264 -g----~~~I~iwd~~~~-------~~~~-~~~~-h~~~V~~l~~sp~g~~l~s~s 305 (877)
. ...|..|++... +.+. .+.. .......|+|.+|+.++++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 0 112666654321 1121 1211 123478899999998777654
No 341
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.06 E-value=0.43 Score=51.00 Aligned_cols=91 Identities=8% Similarity=-0.056 Sum_probs=44.2
Q ss_pred CCCEEEEEe-CCCeEEEEeCCC--cceEEEccCC---CCeeEEEEcCCCCEEEEEEC-C---------CcEEEEeccCCe
Q psy13969 170 NGLWMVTSD-HQGYIKYWQSNM--NNVKTFQGHK---ESIRGISFSPSDSKFATCSD-D---------GTVRVWDFYRCT 233 (877)
Q Consensus 170 d~~~l~sg~-~dg~v~iwd~~~--~~~~~~~~h~---~~V~~i~~sp~~~~l~sgs~-D---------g~I~iwd~~~~~ 233 (877)
++.+++.|+ ....+.+||... ..-..+.... ..-.+++.. ++.+++.|+. + ..|.+||+.+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI-DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE-TTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE-CCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 444555543 345688888753 3333332211 111222222 4666666654 2 468899987754
Q ss_pred eeEE--ec-cCCCCeEEEEEcCCCCEEEEEecC
Q psy13969 234 EEKV--LR-GHGADVKCVDWHPYKSLIVSGSKD 263 (877)
Q Consensus 234 ~~~~--l~-~h~~~v~~v~~sp~~~~l~sgs~d 263 (877)
-... +. .......++. .++++++.|+.+
T Consensus 98 W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 98 WVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp EEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred EEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 3322 11 1111122233 456777777754
No 342
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.82 E-value=0.6 Score=48.88 Aligned_cols=145 Identities=14% Similarity=0.174 Sum_probs=70.8
Q ss_pred cCCCCEEEEEeC----CC-------eEEEEeCCCcceEEEccCCCC--eeEEEEcCCCCEEEEEECC-------CcEEEE
Q psy13969 168 SHNGLWMVTSDH----QG-------YIKYWQSNMNNVKTFQGHKES--IRGISFSPSDSKFATCSDD-------GTVRVW 227 (877)
Q Consensus 168 spd~~~l~sg~~----dg-------~v~iwd~~~~~~~~~~~h~~~--V~~i~~sp~~~~l~sgs~D-------g~I~iw 227 (877)
..++.+++.|+. ++ .+.+||..+..-..+...... -.+++.. ++.+++.++.+ ..+.+|
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~y 132 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCY 132 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE-CCEEEEEcCccCCCCcccceEEEE
Confidence 446677777763 11 277788766554443221111 1122222 56677777653 357888
Q ss_pred eccCCeeeEEe--ccCCCCeEEEEEcCCCCEEEEEecCC----cccEEEEcCCCCceeEE--eccCCCCeeEEEEccCCC
Q psy13969 228 DFYRCTEEKVL--RGHGADVKCVDWHPYKSLIVSGSKDN----QQPVKLWDPKAGQALAT--LHAHKSTVMDLAWNQNGN 299 (877)
Q Consensus 228 d~~~~~~~~~l--~~h~~~v~~v~~sp~~~~l~sgs~dg----~~~I~iwd~~~~~~~~~--~~~h~~~V~~l~~sp~g~ 299 (877)
|+.+.+-...- ....... +++. .++.+++.|+.+. ...+.+||+.+.+-... +...... .+++. -+++
T Consensus 133 d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~ 208 (318)
T 2woz_A 133 DPVAAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSM-FGVAI-HKGK 208 (318)
T ss_dssp ETTTTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEE-ETTE
T ss_pred eCCCCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCccc-ceEEE-ECCE
Confidence 88765433321 1111111 2222 3456666665421 12389999987642221 1111111 12222 2566
Q ss_pred eEEEEeCC-----CeEEEEEcCC
Q psy13969 300 WLVTASRD-----HLLKVFDIRN 317 (877)
Q Consensus 300 ~l~s~s~D-----g~I~iwd~~~ 317 (877)
+++.++.+ ..|.+||+.+
T Consensus 209 iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 209 IVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp EEEEEEEETTEEEEEEEEEETTT
T ss_pred EEEEcCcCCCCccceEEEEECCC
Confidence 67776543 3477888876
No 343
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=94.73 E-value=1.3 Score=45.61 Aligned_cols=206 Identities=15% Similarity=0.153 Sum_probs=107.8
Q ss_pred CCeEEEEeCCCc-ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEE
Q psy13969 180 QGYIKYWQSNMN-NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIV 258 (877)
Q Consensus 180 dg~v~iwd~~~~-~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~ 258 (877)
|+.|+.|-.+.. .+-.-......|..|+...+. .++. . |+.|+.|-....-.+-.-......|..|+...+. .+
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~h--s~ 115 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWA--SY 115 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTE--EE
T ss_pred CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCE--EE
Confidence 888888864421 111111112357777765332 3333 4 8999999765322211111112467777766433 33
Q ss_pred EEecCCcccEEEEcCCCCceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEc
Q psy13969 259 SGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWH 338 (877)
Q Consensus 259 sgs~dg~~~I~iwd~~~~~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~ 338 (877)
.-. |+. |+.|-....-.+-........|..|+...+ +.++-. |+.|+.|-.....++-. -......|..|+..
T Consensus 116 al~-~G~--v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gqlg~-p~~~~~~v~~i~~G 188 (282)
T 3qhy_B 116 ALK-DGK--VIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQTTV-PAEAQSGVDDVAGG 188 (282)
T ss_dssp EEE-TTE--EEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTTSC-CGGGGSSEEEEEEC
T ss_pred EEe-CCe--EEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCCCC-ceecCCCeEEEEec
Confidence 334 777 999965532111111112345666665433 223334 79999997654333211 11113467777765
Q ss_pred CCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCC
Q psy13969 339 PQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRL 405 (877)
Q Consensus 339 p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~ 405 (877)
... .++. .|+.|+.|=....-.+.. .......|..|+-... +.++.. |+.|+.|=.+..
T Consensus 189 ~~h--s~al--~~G~v~~wG~n~~gqlg~-p~~~~~~v~~i~~G~~-h~~al~--~g~v~~wG~n~~ 247 (282)
T 3qhy_B 189 IFH--SLAL--KDGKVIAWGDNRYKQTTV-PTEALSGVSAIASGEW-YSLALK--NGKVIAWGSSRT 247 (282)
T ss_dssp SSE--EEEE--ETTEEEEEECCTTSTTCC-CGGGGSSCCEEEECSS-CEEEEE--TTEEEEESTTCC
T ss_pred CCE--EEEE--ECCeEEEEECCCCCCCCC-CcccCCCceEEEcCCC-EEEEEE--CCEEEEecCCCC
Confidence 443 3333 499999998755332221 1122235777775544 334433 999999987664
No 344
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.60 E-value=4.8 Score=43.40 Aligned_cols=232 Identities=8% Similarity=-0.018 Sum_probs=108.4
Q ss_pred cCCEEEEEEcC--CCCEEEEEeCCC----eEEEEeCCCcceEEEcc--------------CCCCeeEEEEcCC--CCEEE
Q psy13969 159 DCAVRHMVWSH--NGLWMVTSDHQG----YIKYWQSNMNNVKTFQG--------------HKESIRGISFSPS--DSKFA 216 (877)
Q Consensus 159 ~~~V~~l~~sp--d~~~l~sg~~dg----~v~iwd~~~~~~~~~~~--------------h~~~V~~i~~sp~--~~~l~ 216 (877)
...|.+|++.+ ++.++| +...+ .|...+-....-..+.. +...|.+|++.+. ...|.
T Consensus 54 ~~~v~~i~~dp~~~~~l~~-g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLM-AARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp TSEEEEEEECSSSTTCEEE-EEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CCceEEEEECCCCCCeEEE-EecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 34688999988 444444 43344 34444321221111110 1135788999862 45566
Q ss_pred EEECCCcEEEEeccCCeeeEEec-------------------cCCCCeEEEEEcCC-CCEEEEEecCCcccEEEEcCCCC
Q psy13969 217 TCSDDGTVRVWDFYRCTEEKVLR-------------------GHGADVKCVDWHPY-KSLIVSGSKDNQQPVKLWDPKAG 276 (877)
Q Consensus 217 sgs~Dg~I~iwd~~~~~~~~~l~-------------------~h~~~v~~v~~sp~-~~~l~sgs~dg~~~I~iwd~~~~ 276 (877)
++...+.|...+= .++.-..+. .....|.+|.+++. ...|+++..++. |+..+- .+
T Consensus 133 ~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~gg--l~~s~D-gG 208 (394)
T 3b7f_A 133 AGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGG--VFESTD-AG 208 (394)
T ss_dssp EEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBE--EEEESS-TT
T ss_pred EEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCC--EEEECC-CC
Confidence 5655555555431 222212221 01245789999874 345555554443 554432 22
Q ss_pred ceeEEecc-----C--------CCCeeEEEEccC-CCeEEEEeCCCeEEEEEcCCCCcceEEEec--CC---CCeEEEEE
Q psy13969 277 QALATLHA-----H--------KSTVMDLAWNQN-GNWLVTASRDHLLKVFDIRNLSSEVQTFRG--HK---KEASAVAW 337 (877)
Q Consensus 277 ~~~~~~~~-----h--------~~~V~~l~~sp~-g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~--h~---~~v~~i~~ 337 (877)
+....+.. + ...|.+|.++++ ...|++++..+ |...+-. ......+.. .. ..+.+|++
T Consensus 209 ~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D~--G~tW~~~~~~l~~~~~~~~~~i~~ 285 (394)
T 3b7f_A 209 TDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDRR--EGVWKRIGDAMPREVGDIGFPIVV 285 (394)
T ss_dssp SSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEETT--TTEEECGGGGSCTTTCSCEEEEEE
T ss_pred CCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCCC--CCcceECCCCCCCCCccceEEEEE
Confidence 22222211 0 134889999985 45666666544 4444321 122222211 11 34567888
Q ss_pred cCCCCcEEEEEeC-----------CCcEEEEEcCC-CceeEEecCc--CCC-----CEEEEEEcCCC-CEEEEEEcCCeE
Q psy13969 338 HPQHEGLFSSGGA-----------DGSIMFWHVGA-DKEVGCIPQA--HDN-----IIWTMAWHPLG-HILATGSNDHAS 397 (877)
Q Consensus 338 ~p~~~~~l~sgs~-----------dg~I~iwd~~~-~~~~~~~~~~--h~~-----~V~~v~~sp~g-~~l~sg~~dg~v 397 (877)
+|.....|+++.. ++...||.... ++....+... ... ...+++++|.. ..|+.++.++.|
T Consensus 286 ~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l 365 (394)
T 3b7f_A 286 HQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEI 365 (394)
T ss_dssp CSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCE
T ss_pred CCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeE
Confidence 8754333444321 33345555433 3333333111 100 11357787743 446666555554
Q ss_pred E
Q psy13969 398 K 398 (877)
Q Consensus 398 ~ 398 (877)
.
T Consensus 366 ~ 366 (394)
T 3b7f_A 366 W 366 (394)
T ss_dssp E
T ss_pred E
Confidence 4
No 345
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.40 E-value=7.6 Score=42.88 Aligned_cols=230 Identities=11% Similarity=0.084 Sum_probs=114.4
Q ss_pred CEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCc----ceEEEc---c------CCCCeeEEEEcCC---CCEEEEE-EC--
Q psy13969 161 AVRHMVWSHNGL-WMVTSDHQGYIKYWQSNMN----NVKTFQ---G------HKESIRGISFSPS---DSKFATC-SD-- 220 (877)
Q Consensus 161 ~V~~l~~spd~~-~l~sg~~dg~v~iwd~~~~----~~~~~~---~------h~~~V~~i~~sp~---~~~l~sg-s~-- 220 (877)
.-..|+|.||++ .|+++...|.|++++.+.. .+..+. . ....+..|+|+|+ +.+|++. +.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 456788888885 4455567899999975432 122221 1 1356789999996 3333333 22
Q ss_pred C----------CcEEEEeccC----------CeeeEEec--cCCCCeEEEEEcCCCCEEEEEecCCc-------------
Q psy13969 221 D----------GTVRVWDFYR----------CTEEKVLR--GHGADVKCVDWHPYKSLIVSGSKDNQ------------- 265 (877)
Q Consensus 221 D----------g~I~iwd~~~----------~~~~~~l~--~h~~~v~~v~~sp~~~~l~sgs~dg~------------- 265 (877)
+ ..|.-|.+.. .+.+..+. ........|+|.||+.++++.+..+.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~ 174 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLSD 174 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCCS
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCccccccCcCC
Confidence 1 1454565532 12222222 22234688999999987776654431
Q ss_pred --ccEEEEcCCCC---------------------ceeEEeccCCCCeeEEEEccC-----CC-eEEEEeCCC----eEEE
Q psy13969 266 --QPVKLWDPKAG---------------------QALATLHAHKSTVMDLAWNQN-----GN-WLVTASRDH----LLKV 312 (877)
Q Consensus 266 --~~I~iwd~~~~---------------------~~~~~~~~h~~~V~~l~~sp~-----g~-~l~s~s~Dg----~I~i 312 (877)
+.|.-.|.... ..+.. .+|. ....++|++. ++ +++.+...+ .-.|
T Consensus 175 ~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a-~G~R-Np~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei 252 (463)
T 2wg3_C 175 FTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFA-HGLH-DPGRCAVDRHPTDININLTILCSDSNGKNRSSARI 252 (463)
T ss_dssp CTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEE-ECCS-SCCBEEEESSCSSTTCSEEEEEECC------CEEE
T ss_pred CCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEE-ECCC-CcceEEECCCCCCcccceEEEecccCCCCCCCCeE
Confidence 12444444431 01111 1222 3456899986 33 344332111 1233
Q ss_pred EEcCCC-----CcceEEEecCC-CCeEEEEEcCCC-----CcEEEEEeCCCcEEEEEcCCCc---eeEEec--------C
Q psy13969 313 FDIRNL-----SSEVQTFRGHK-KEASAVAWHPQH-----EGLFSSGGADGSIMFWHVGADK---EVGCIP--------Q 370 (877)
Q Consensus 313 wd~~~~-----~~~~~~~~~h~-~~v~~i~~~p~~-----~~~l~sgs~dg~I~iwd~~~~~---~~~~~~--------~ 370 (877)
..+... ..++..+..|. ..++.+.|.... ..-++.+...+.|....+.... ....+. .
T Consensus 253 ~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~ 332 (463)
T 2wg3_C 253 LQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCRG 332 (463)
T ss_dssp EEEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETTSCEEEEEC-----CCEEEEECEEETTSSCS
T ss_pred eeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCCCcEEEEEeCCCCceeeEEEeecCCcccccc
Confidence 333221 13444444332 467777775321 1113345555766666554332 111110 1
Q ss_pred cCCCCEEEEEEcCCCCEEEEEE
Q psy13969 371 AHDNIIWTMAWHPLGHILATGS 392 (877)
Q Consensus 371 ~h~~~V~~v~~sp~g~~l~sg~ 392 (877)
.....+.+|++.|||.++++..
T Consensus 333 ~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 333 YFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp CCCSEEEEEEECTTCCEEEEEE
T ss_pred cccCcceEEEECCCCCEEEEec
Confidence 1235689999999998877765
No 346
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=94.16 E-value=3.8 Score=42.02 Aligned_cols=188 Identities=14% Similarity=0.099 Sum_probs=101.2
Q ss_pred CCeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeE
Q psy13969 201 ESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALA 280 (877)
Q Consensus 201 ~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~ 280 (877)
..|..|+.... +.+.-. |+.|+.|-....-.+-.-......|..|+...+.. ++. . |+. |+.|-....-.+-
T Consensus 24 ~~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs-~~l-~-~G~--v~~wG~n~~Gqlg 95 (282)
T 3qhy_B 24 SGVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHS-LAL-K-DGE--VIAWGGNEDGQTT 95 (282)
T ss_dssp SSCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEE-EEE-E-TTE--EEEEECCTTSTTC
T ss_pred CCCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEE-EEE-E-CCE--EEEeeCCCCCCCC
Confidence 35777776532 333335 89999997654322111111223567777654333 333 4 777 9988755321111
Q ss_pred EeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcC
Q psy13969 281 TLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVG 360 (877)
Q Consensus 281 ~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~ 360 (877)
.-..-...|..|+...+ +.++-+ |+.|+.|-.....++-. .......|..|+..... .++ -. |+.|+.|-..
T Consensus 96 ~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~-~~~~~~~i~~i~~G~~~--~~~-l~-~G~v~~wG~n 167 (282)
T 3qhy_B 96 VPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTV-PAEAQSGVTALDGGVYT--ALA-VK-NGGVIAWGDN 167 (282)
T ss_dssp CCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSC-CGGGGSSEEEEEECSSE--EEE-EE-TTEEEEEECC
T ss_pred CCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCC-CccCCCCeEEEEcccCE--EEE-EE-CCEEEEecCC
Confidence 11111345777765543 344445 99999997655333211 11123457777665443 233 23 7999999875
Q ss_pred CCceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCC
Q psy13969 361 ADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDP 408 (877)
Q Consensus 361 ~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~ 408 (877)
....+. +.......|..|+-..+ +.++. .|+.|+.|=.+..+..
T Consensus 168 ~~gqlg-~p~~~~~~v~~i~~G~~-hs~al--~~G~v~~wG~n~~gql 211 (282)
T 3qhy_B 168 YFGQTT-VPAEAQSGVDDVAGGIF-HSLAL--KDGKVIAWGDNRYKQT 211 (282)
T ss_dssp TTSTTS-CCGGGGSSEEEEEECSS-EEEEE--ETTEEEEEECCTTSTT
T ss_pred CCCCCC-CceecCCCeEEEEecCC-EEEEE--ECCeEEEEECCCCCCC
Confidence 533222 11122356777876543 33444 5999999987765444
No 347
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.06 E-value=1.1 Score=47.16 Aligned_cols=189 Identities=8% Similarity=0.028 Sum_probs=96.5
Q ss_pred CEEEEEeCCCeEEEEeCCCcceE-EEccC-CCCeeEEEEc--C-CCCEEEEE-ECCCcEEEEeccCCeeeEEecc----C
Q psy13969 172 LWMVTSDHQGYIKYWQSNMNNVK-TFQGH-KESIRGISFS--P-SDSKFATC-SDDGTVRVWDFYRCTEEKVLRG----H 241 (877)
Q Consensus 172 ~~l~sg~~dg~v~iwd~~~~~~~-~~~~h-~~~V~~i~~s--p-~~~~l~sg-s~Dg~I~iwd~~~~~~~~~l~~----h 241 (877)
.+++.++.||.|+-+|.++.++. .+... ..++..+.-. + ++..++.. +.||.|..+|..++.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 36778888999888886655433 33322 1222211100 1 22333333 5799999999887755443321 1
Q ss_pred CCCeEE---EEE-c----CCCCEEEEEecCCcccEEEEcCCCCceeEEeccCCC-------CeeEEEEc-----cCCCeE
Q psy13969 242 GADVKC---VDW-H----PYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKS-------TVMDLAWN-----QNGNWL 301 (877)
Q Consensus 242 ~~~v~~---v~~-s----p~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h~~-------~V~~l~~s-----p~g~~l 301 (877)
..++.. ... . ..+..+++++.++. ++..|+++++.+.++..... ...|.... ..+..|
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~--l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTI--MYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEE--EEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCE--EEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 122221 000 0 13567889999998 99999999999988864211 01111111 123567
Q ss_pred EEEeCCCeEEEEEcCCCCcce----EEEecCCCC--eE-EEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeE
Q psy13969 302 VTASRDHLLKVFDIRNLSSEV----QTFRGHKKE--AS-AVAWHPQHEGLFSSGGADGSIMFWHVGADKEVG 366 (877)
Q Consensus 302 ~s~s~Dg~I~iwd~~~~~~~~----~~~~~h~~~--v~-~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~ 366 (877)
+.+..+..|.+.+ ++ .... .....+... +. .-..+.++. + +.++.|+.|..+|..++..+-
T Consensus 169 ~ig~~~y~v~~~~-~s-G~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~-~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 169 VIGKTIFELGIHS-YD-GASYNVTYSTWQQNVLDVPLALQNTFSKDGM-C-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEECEECC-TT-SCCCCCEEEEEECCTTTHHHHTTCSSCSSSC-C-EEEETTTEEEEECSTTCCEEE
T ss_pred EEecceEEEEEEC-CC-CCeEEEecccccccccccccccccccccCCc-E-EEECCCCEEEEEECCCCcEEE
Confidence 7777777776666 33 1110 011110000 00 000011233 3 446788888888888777654
No 348
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.96 E-value=1.5 Score=51.71 Aligned_cols=193 Identities=8% Similarity=0.051 Sum_probs=102.2
Q ss_pred CCCCEEEEEeCC----CeEEEEeCCCcceEEEc-c------CC-CCeeEEEEcC-CCCEEEEEECC------CcEEEEec
Q psy13969 169 HNGLWMVTSDHQ----GYIKYWQSNMNNVKTFQ-G------HK-ESIRGISFSP-SDSKFATCSDD------GTVRVWDF 229 (877)
Q Consensus 169 pd~~~l~sg~~d----g~v~iwd~~~~~~~~~~-~------h~-~~V~~i~~sp-~~~~l~sgs~D------g~I~iwd~ 229 (877)
.++.+++.|+.+ ..+.+||..+.....+. . .. ..-.+++... ++.+++.|+.+ ..+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677776643 46888887766555444 1 11 1112333333 66677777643 35888998
Q ss_pred cCCeeeEE--eccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEecc------CCCCeeEEEEccC-CCe
Q psy13969 230 YRCTEEKV--LRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHA------HKSTVMDLAWNQN-GNW 300 (877)
Q Consensus 230 ~~~~~~~~--l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~------h~~~V~~l~~sp~-g~~ 300 (877)
.+.+-... +..... -.+++...++.+++.|+.+....+.+||+.+.+- ..+.. ......++.++.+ +.+
T Consensus 476 ~t~~W~~~~~~p~~R~-~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W-~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRF-RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIF-KDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTEEEECCCCSBCCB-SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEE-EECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCcEEECCCCCCCcc-cceEEEEcCCEEEEECCCCCCCCEEEEECCCCce-EEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 77543222 111111 1233332367888888776533499999987642 22211 1222233555554 566
Q ss_pred EEEEeC--C-----CeEEEEEcCCCCc--c--eEEEec----CCCCeEEEEEcCCCCcEEEEEeC--------CCcEEEE
Q psy13969 301 LVTASR--D-----HLLKVFDIRNLSS--E--VQTFRG----HKKEASAVAWHPQHEGLFSSGGA--------DGSIMFW 357 (877)
Q Consensus 301 l~s~s~--D-----g~I~iwd~~~~~~--~--~~~~~~----h~~~v~~i~~~p~~~~~l~sgs~--------dg~I~iw 357 (877)
++.++. + ..|.+||+.+... . ...+.. ......++ ...++. +++.|+. ...|.+|
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~-~~~~~~-iyv~GG~~~~~~~~~~~~v~~y 631 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIK-YITPRK-LLIVGGTSPSGLFDRTNSIISL 631 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEE-EEETTE-EEEECCBCSSCCCCTTTSEEEE
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEE-EeCCCE-EEEECCccCCCCCCCCCeEEEE
Confidence 777665 2 4588999887330 0 112211 11112222 333233 7777764 3468999
Q ss_pred EcCCCcee
Q psy13969 358 HVGADKEV 365 (877)
Q Consensus 358 d~~~~~~~ 365 (877)
|+.+.+-.
T Consensus 632 d~~t~~W~ 639 (695)
T 2zwa_A 632 DPLSETLT 639 (695)
T ss_dssp ETTTTEEE
T ss_pred ECCCCeEE
Confidence 99876543
No 349
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.71 E-value=1 Score=46.77 Aligned_cols=183 Identities=12% Similarity=0.123 Sum_probs=89.7
Q ss_pred CCCEEEEEeC---------CCeEEEEeCCCcceEEEccCC---CCeeEEEEcCCCCEEEEEECC-----CcEEEEeccCC
Q psy13969 170 NGLWMVTSDH---------QGYIKYWQSNMNNVKTFQGHK---ESIRGISFSPSDSKFATCSDD-----GTVRVWDFYRC 232 (877)
Q Consensus 170 d~~~l~sg~~---------dg~v~iwd~~~~~~~~~~~h~---~~V~~i~~sp~~~~l~sgs~D-----g~I~iwd~~~~ 232 (877)
++.+++.|+. ...+.+||..+..-..+.... ....++.+ ++++++.++.+ ..+.+||+.+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 4555555554 246788887766544433211 11222233 56666666533 46888998765
Q ss_pred eeeEE--eccCCCCeEEEEEcCCCCEEEEEecCCc---ccEEEEcCCCCceeE--EeccCCCCeeEEEEccCCCeEEEEe
Q psy13969 233 TEEKV--LRGHGADVKCVDWHPYKSLIVSGSKDNQ---QPVKLWDPKAGQALA--TLHAHKSTVMDLAWNQNGNWLVTAS 305 (877)
Q Consensus 233 ~~~~~--l~~h~~~v~~v~~sp~~~~l~sgs~dg~---~~I~iwd~~~~~~~~--~~~~h~~~V~~l~~sp~g~~l~s~s 305 (877)
+-... +........++.+ ++.+++.|+.++. ..+.+||+.+.+-.. .+........++.+ ++.+++.++
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 223 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGG 223 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeC
Confidence 43322 1111122223333 5666777665421 238899987654221 11111111222222 566777776
Q ss_pred CC-----CeEEEEEcCCCCcceEEEecC---CCCeEEEEEcCCCCcEEEEEeCC-----CcEEEEEcCCCc
Q psy13969 306 RD-----HLLKVFDIRNLSSEVQTFRGH---KKEASAVAWHPQHEGLFSSGGAD-----GSIMFWHVGADK 363 (877)
Q Consensus 306 ~D-----g~I~iwd~~~~~~~~~~~~~h---~~~v~~i~~~p~~~~~l~sgs~d-----g~I~iwd~~~~~ 363 (877)
.+ ..|.+||+.+. ....+... .....++.+ ++ .+++.|+.+ ..|.+||+.+.+
T Consensus 224 ~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 224 YDGQDQLNSVERYDVETE--TWTFVAPMKHRRSALGITVH--QG-RIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp BCSSSBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCCCCccceEEEEeCCCC--cEEECCCCCCCccceEEEEE--CC-EEEEEcCcCCCcccceEEEEcCCCCE
Confidence 54 45899998762 22222211 111122222 33 366776644 346677776543
No 350
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=93.52 E-value=9.5 Score=40.94 Aligned_cols=211 Identities=10% Similarity=0.023 Sum_probs=101.0
Q ss_pred CEEEEEeCCCeEEEEeCCC--cceEEE--ccCCCCeeEEEEcC-CCCEEEEEECCC----cEEEEeccCCeeeEEecc--
Q psy13969 172 LWMVTSDHQGYIKYWQSNM--NNVKTF--QGHKESIRGISFSP-SDSKFATCSDDG----TVRVWDFYRCTEEKVLRG-- 240 (877)
Q Consensus 172 ~~l~sg~~dg~v~iwd~~~--~~~~~~--~~h~~~V~~i~~sp-~~~~l~sgs~Dg----~I~iwd~~~~~~~~~l~~-- 240 (877)
..|.++...| +.+++.+. .....+ ......|.+|++.+ +...|.++...+ .|...+ ..++.-..+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPP 100 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccc
Confidence 3566677777 44444322 222222 12345699999998 233444444444 344332 22222111110
Q ss_pred ------------CCCCeEEEEEcCC--CCEEEEEecCCcccEEEEcCCCCceeEEecc-------------------CCC
Q psy13969 241 ------------HGADVKCVDWHPY--KSLIVSGSKDNQQPVKLWDPKAGQALATLHA-------------------HKS 287 (877)
Q Consensus 241 ------------h~~~v~~v~~sp~--~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~-------------------h~~ 287 (877)
+...|.+|++++. ...|+++...+. |+..+- .++....+.. ...
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~gg--l~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~ 177 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQG--LFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGP 177 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTE--EEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCC
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCc--EEEEcC-CCCCeEECcCccCCccccccccccccCCCCCC
Confidence 1125778999872 455666655554 555542 2222222211 123
Q ss_pred CeeEEEEcc-CCCeEEEEeCCCeEEEEEcCCCCcceEEEec-----C--------CCCeEEEEEcCCCCcEEEEEeCCCc
Q psy13969 288 TVMDLAWNQ-NGNWLVTASRDHLLKVFDIRNLSSEVQTFRG-----H--------KKEASAVAWHPQHEGLFSSGGADGS 353 (877)
Q Consensus 288 ~V~~l~~sp-~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~-----h--------~~~v~~i~~~p~~~~~l~sgs~dg~ 353 (877)
.|.+|.+++ +...|++++.++.|...+ ........+.. + ...+.+|++++.....|+++...+
T Consensus 178 ~i~~i~~d~~~~~~l~vg~~~ggl~~s~--DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g- 254 (394)
T 3b7f_A 178 KMHSILVDPRDPKHLYIGMSSGGVFEST--DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG- 254 (394)
T ss_dssp EEEEEEECTTCTTCEEEEEETBEEEEES--STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-
T ss_pred ceeEEEECCCCCCEEEEEECCCCEEEEC--CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-
Confidence 578999987 344555555455444332 21222222211 0 134889999987544566665544
Q ss_pred EEEEEcCCCceeEEecC-cCC---CCEEEEEEcCC-CCEEEEE
Q psy13969 354 IMFWHVGADKEVGCIPQ-AHD---NIIWTMAWHPL-GHILATG 391 (877)
Q Consensus 354 I~iwd~~~~~~~~~~~~-~h~---~~V~~v~~sp~-g~~l~sg 391 (877)
|+..+ ..++....+.. ... ..+.+|+++|. ...|+++
T Consensus 255 l~~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 255 IYRMD-RREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp EEEEE-TTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred EEEeC-CCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 44443 23333333311 111 34678888763 2334444
No 351
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.44 E-value=0.65 Score=49.52 Aligned_cols=143 Identities=10% Similarity=-0.044 Sum_probs=62.6
Q ss_pred CcEEEEeccCCeeeEE--eccCCCCeEEEEEcCCCCEEEEEecCC----cccEEEEcC--CCCceeEEecc---CCCCee
Q psy13969 222 GTVRVWDFYRCTEEKV--LRGHGADVKCVDWHPYKSLIVSGSKDN----QQPVKLWDP--KAGQALATLHA---HKSTVM 290 (877)
Q Consensus 222 g~I~iwd~~~~~~~~~--l~~h~~~v~~v~~sp~~~~l~sgs~dg----~~~I~iwd~--~~~~~~~~~~~---h~~~V~ 290 (877)
..|.+||+.+.+-... +......-.+++.. ++.+++.|+.+. ...+.+||+ .+.+ ...+.. ......
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~-W~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLK-WNKLAPVSSPDGVAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CE-EEECCCSSTTTCCBS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCc-EEecCCCCCCccccc
Confidence 4788999877544332 22111111233332 455666655321 112777876 3332 222211 111111
Q ss_pred EEEEccCCCeEEEEeCC----------------------CeEEEEEcCCCC-cceEEEecCCCCeEEEEEcCCCCcEEEE
Q psy13969 291 DLAWNQNGNWLVTASRD----------------------HLLKVFDIRNLS-SEVQTFRGHKKEASAVAWHPQHEGLFSS 347 (877)
Q Consensus 291 ~l~~sp~g~~l~s~s~D----------------------g~I~iwd~~~~~-~~~~~~~~h~~~v~~i~~~p~~~~~l~s 347 (877)
+.+...++.+++.++.+ ..+.+||+.+.. ..+..+........++. -++. +++.
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~-i~v~ 322 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLP--WNNS-LLII 322 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEE--ETTE-EEEE
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEE--eCCE-EEEE
Confidence 11222355666666532 247788887522 11222221112222232 2333 7777
Q ss_pred EeCCC------cEEEEEcCCCceeEEec
Q psy13969 348 GGADG------SIMFWHVGADKEVGCIP 369 (877)
Q Consensus 348 gs~dg------~I~iwd~~~~~~~~~~~ 369 (877)
|+.+. .|.++++++.+.+....
T Consensus 323 GG~~~~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 323 GGETAGGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp EEECGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred eeeCCCCCEeeeEEEEEEcCcEeEeeec
Confidence 77553 35566887777665543
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.56 E-value=15 Score=40.53 Aligned_cols=105 Identities=13% Similarity=0.117 Sum_probs=60.2
Q ss_pred CeeEEEEcCCCC-EEEEEECCCcEEEEeccCC---eeeEEecc---------CCCCeEEEEEcCC----CCEEEEEecCC
Q psy13969 202 SIRGISFSPSDS-KFATCSDDGTVRVWDFYRC---TEEKVLRG---------HGADVKCVDWHPY----KSLIVSGSKDN 264 (877)
Q Consensus 202 ~V~~i~~sp~~~-~l~sgs~Dg~I~iwd~~~~---~~~~~l~~---------h~~~v~~v~~sp~----~~~l~sgs~dg 264 (877)
.-+.|+|.|++. .|+++...|.|++++.... ..+..+.. .......|+|+|+ +.++++-+.+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 356899999986 5666678899999975322 12222211 1346788999996 33334333211
Q ss_pred ----------cccEEEEcCCC----------CceeEEec--cCCCCeeEEEEccCCCeEEEEeC
Q psy13969 265 ----------QQPVKLWDPKA----------GQALATLH--AHKSTVMDLAWNQNGNWLVTASR 306 (877)
Q Consensus 265 ----------~~~I~iwd~~~----------~~~~~~~~--~h~~~V~~l~~sp~g~~l~s~s~ 306 (877)
...|.-|.+.. .+.+..+. ........|+|.||+.++++.+.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 01144455432 12333332 12234678999999987777654
No 353
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=91.79 E-value=14 Score=38.41 Aligned_cols=227 Identities=8% Similarity=0.021 Sum_probs=124.6
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCc--------ceE--EEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCCee----
Q psy13969 169 HNGLWMVTSDHQGYIKYWQSNMN--------NVK--TFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTE---- 234 (877)
Q Consensus 169 pd~~~l~sg~~dg~v~iwd~~~~--------~~~--~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~---- 234 (877)
++..++++.+.+|.|+--.++.- -+. .+.. .+.+..+........|+..+..|.++.+....-..
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 45677889999999998764321 111 1222 24455555554566788888899988776642111
Q ss_pred --------eEEeccCCCCeEEEEEcC---CCCEEEEEecCCcccEEEEcCCCC-------ceeEEeccCCCCeeEEEEcc
Q psy13969 235 --------EKVLRGHGADVKCVDWHP---YKSLIVSGSKDNQQPVKLWDPKAG-------QALATLHAHKSTVMDLAWNQ 296 (877)
Q Consensus 235 --------~~~l~~h~~~v~~v~~sp---~~~~l~sgs~dg~~~I~iwd~~~~-------~~~~~~~~h~~~V~~l~~sp 296 (877)
...+. ....|.++.... +..+|+..+..|. ++...+..- .....+.. ...+..+....
T Consensus 85 ~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~--~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~ 160 (312)
T 1suu_A 85 SKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGK--IARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVF 160 (312)
T ss_dssp ---CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSE--EEEEEGGGGCC----CEECBCCCT-TCCEEEEEEEC
T ss_pred CCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCe--EEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeC
Confidence 01122 223454443332 4567888899988 887766422 22222333 45566665555
Q ss_pred CCCeEEEEeCCCeEEEEEcCCCCc--------ceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCc-----
Q psy13969 297 NGNWLVTASRDHLLKVFDIRNLSS--------EVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADK----- 363 (877)
Q Consensus 297 ~g~~l~s~s~Dg~I~iwd~~~~~~--------~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~----- 363 (877)
....|+..+.++.+..+.+..... ....+.. ...|.++....+.. .+++.+..|.++..++..-.
T Consensus 161 ~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~-~l~~vt~~G~~kr~~~~e~~~~~R~ 238 (312)
T 1suu_A 161 KDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENP-YLLIVSENGYGKRLNMSKISELKRG 238 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCS-EEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred CCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCC-eEEEEECCCceEEEEHHHhcccCCC
Confidence 566788999999998888754111 1112222 34556665544444 46677889999888874321
Q ss_pred ----eeEEecCcCCCCEEEE-EEcCCCCEEEEEEcCCeEEEEeCC
Q psy13969 364 ----EVGCIPQAHDNIIWTM-AWHPLGHILATGSNDHASKFWTRN 403 (877)
Q Consensus 364 ----~~~~~~~~h~~~V~~v-~~sp~g~~l~sg~~dg~v~iwd~~ 403 (877)
.+..+.......+.++ .+. +...|+..+..+.+.-..++
T Consensus 239 ~kGv~~~~~~k~~~~~lv~~~~~~-~~~~l~~~t~~g~~~r~~~~ 282 (312)
T 1suu_A 239 ATGYTSYKKSDKKAGSVVDAIAVS-EDDEILLVSKRSKALRTVAG 282 (312)
T ss_dssp CCCEECSCTTCTTTCSEEEEEEEC-TTCEEEEEETTCEEEEEEGG
T ss_pred CCCEEeeEccCCCCCeEEEEEEeC-CCCEEEEEeCCCeEEEEEcc
Confidence 1111111122344433 444 44556666667755444443
No 354
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=91.70 E-value=23 Score=41.42 Aligned_cols=235 Identities=10% Similarity=0.101 Sum_probs=121.6
Q ss_pred EEEEE-EcCCCCEEEEE-----eCCCeEEEEeCCCcceEE--EccCCC--------CeeEEEEcCCCCEEEEEEC-----
Q psy13969 162 VRHMV-WSHNGLWMVTS-----DHQGYIKYWQSNMNNVKT--FQGHKE--------SIRGISFSPSDSKFATCSD----- 220 (877)
Q Consensus 162 V~~l~-~spd~~~l~sg-----~~dg~v~iwd~~~~~~~~--~~~h~~--------~V~~i~~sp~~~~l~sgs~----- 220 (877)
...+. +++|+++++.+ +.-.+|+++|+.+..... +. ... ....++|. +...|+.++.
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~ 208 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNE 208 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEE-CCCEEEEEeCCCCCC
Confidence 33444 88898877653 333579999988765431 11 000 11345887 4444444421
Q ss_pred ------CCcEEEEeccCCe--eeEEeccCCCCe-EEEEEcCCCCE-----EEEEecCCc-ccEEEEcCCC--CceeEEec
Q psy13969 221 ------DGTVRVWDFYRCT--EEKVLRGHGADV-KCVDWHPYKSL-----IVSGSKDNQ-QPVKLWDPKA--GQALATLH 283 (877)
Q Consensus 221 ------Dg~I~iwd~~~~~--~~~~l~~h~~~v-~~v~~sp~~~~-----l~sgs~dg~-~~I~iwd~~~--~~~~~~~~ 283 (877)
-.+|++|.+-+.. -..++......+ .++..+.++.+ +++.+.+-. ..+++.|... ++ +..+.
T Consensus 209 ~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 287 (711)
T 4hvt_A 209 ITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKIN 287 (711)
T ss_dssp BCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECC
T ss_pred cCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEee
Confidence 2468888875532 233444433333 23445666652 444432321 2266667653 32 23332
Q ss_pred cCCCCeeEEEEccCCCeEEEEe----------CCCeEEEEEcCCCC------cceEEEecC--CCCeEEEEEcCCCCcEE
Q psy13969 284 AHKSTVMDLAWNQNGNWLVTAS----------RDHLLKVFDIRNLS------SEVQTFRGH--KKEASAVAWHPQHEGLF 345 (877)
Q Consensus 284 ~h~~~V~~l~~sp~g~~l~s~s----------~Dg~I~iwd~~~~~------~~~~~~~~h--~~~v~~i~~~p~~~~~l 345 (877)
.... ..+..+.++.+++... ..+.|.++|+.... .....+..+ ...+..++|..+ .++
T Consensus 288 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~l~ 363 (711)
T 4hvt_A 288 MPSD--ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD--RVF 363 (711)
T ss_dssp SCTT--CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS--CEE
T ss_pred cCCc--ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC--EEE
Confidence 2221 1223344555555332 35668888887631 223332333 345677888765 478
Q ss_pred EEEeCCCc--EEEEEcCCCc-eeEE-ecCcCCCCEEEEEEcCCC-CEEEEEEcC---CeEEEEeCC
Q psy13969 346 SSGGADGS--IMFWHVGADK-EVGC-IPQAHDNIIWTMAWHPLG-HILATGSND---HASKFWTRN 403 (877)
Q Consensus 346 ~sgs~dg~--I~iwd~~~~~-~~~~-~~~~h~~~V~~v~~sp~g-~~l~sg~~d---g~v~iwd~~ 403 (877)
++...++. |.++|+.++. .+.. +.......|..+.+++++ .++++.+.. ..|..+|+.
T Consensus 364 ~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 364 LATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 88777774 6677766553 2222 311223457767777766 455554432 357777764
No 355
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=91.35 E-value=17 Score=38.71 Aligned_cols=168 Identities=10% Similarity=0.136 Sum_probs=93.1
Q ss_pred cEEEEeccCC--eeeEEecc------CCCCeEEEEEc---CC----CCEEEEEecCCcccEEEEcCCCCceeEEeccC--
Q psy13969 223 TVRVWDFYRC--TEEKVLRG------HGADVKCVDWH---PY----KSLIVSGSKDNQQPVKLWDPKAGQALATLHAH-- 285 (877)
Q Consensus 223 ~I~iwd~~~~--~~~~~l~~------h~~~v~~v~~s---p~----~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h-- 285 (877)
.|.+||+.+. +.++.+.- ..+.+..|.+. +. ..+++.+.... ..|.++|+.+++..+.++.+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~-~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLR-GALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTT-TEEEEEETTTTEEEEEECGGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCC-CcEEEEECCCCcEEEEccCCCc
Confidence 5667777776 66665542 23457777777 22 33444444322 23999999988766655210
Q ss_pred ----------------CCCeeEEEEccC----CCeEEEEeCCCeEEEEEcC-----CC--CcceEEEecC--CCCeEEEE
Q psy13969 286 ----------------KSTVMDLAWNQN----GNWLVTASRDHLLKVFDIR-----NL--SSEVQTFRGH--KKEASAVA 336 (877)
Q Consensus 286 ----------------~~~V~~l~~sp~----g~~l~s~s~Dg~I~iwd~~-----~~--~~~~~~~~~h--~~~v~~i~ 336 (877)
...|..|+++|+ +++|+.....+. ++|.+. .. ...++.+-.. ...-..++
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALA 281 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEE
Confidence 136778888987 677777765552 344332 11 1122222111 12333456
Q ss_pred EcCCCCcEEEEEeCCCcEEEEEcCC-C---ceeEEec-CcCCCCEEEEEEcCCCCEEEEEE
Q psy13969 337 WHPQHEGLFSSGGADGSIMFWHVGA-D---KEVGCIP-QAHDNIIWTMAWHPLGHILATGS 392 (877)
Q Consensus 337 ~~p~~~~~l~sgs~dg~I~iwd~~~-~---~~~~~~~-~~h~~~V~~v~~sp~g~~l~sg~ 392 (877)
+.+....++++--....|..|+... . ..+..+. ...-..+..+++..++.+.++++
T Consensus 282 ~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 282 YDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp ECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred EeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 6533334777777788999999875 1 1222221 12223567777776665555443
No 356
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.11 E-value=2.4 Score=49.88 Aligned_cols=191 Identities=9% Similarity=0.058 Sum_probs=99.2
Q ss_pred CCCCEEEEEECC----CcEEEEeccCCeeeEEe-c-------cCCCCeEEEEEcCCCCEEEEEecCCc----ccEEEEcC
Q psy13969 210 PSDSKFATCSDD----GTVRVWDFYRCTEEKVL-R-------GHGADVKCVDWHPYKSLIVSGSKDNQ----QPVKLWDP 273 (877)
Q Consensus 210 p~~~~l~sgs~D----g~I~iwd~~~~~~~~~l-~-------~h~~~v~~v~~sp~~~~l~sgs~dg~----~~I~iwd~ 273 (877)
.++.+++.|+.+ ..+.+||+.+.+-...- . .......++.+..++.+++.|+.+.. ..+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 356677777643 46888998776543322 1 11112233333226677777775532 23889998
Q ss_pred CCCce--eEEeccCCCCeeEEEEccCCCeEEEEeCCC--eEEEEEcCCCCcceEEEec------CCCCeEEEEEcCCCCc
Q psy13969 274 KAGQA--LATLHAHKSTVMDLAWNQNGNWLVTASRDH--LLKVFDIRNLSSEVQTFRG------HKKEASAVAWHPQHEG 343 (877)
Q Consensus 274 ~~~~~--~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg--~I~iwd~~~~~~~~~~~~~------h~~~v~~i~~~p~~~~ 343 (877)
.+.+- +..+.... .-.+++...++.+++.++.+. .+.+||+.+. ....+.. ......++.+......
T Consensus 476 ~t~~W~~~~~~p~~R-~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~--~W~~~~~~g~~p~~r~~~~a~v~~~~~~~ 552 (695)
T 2zwa_A 476 KTREWSMIKSLSHTR-FRHSACSLPDGNVLILGGVTEGPAMLLYNVTEE--IFKDVTPKDEFFQNSLVSAGLEFDPVSKQ 552 (695)
T ss_dssp TTTEEEECCCCSBCC-BSCEEEECTTSCEEEECCBCSSCSEEEEETTTT--EEEECCCSSGGGGSCCBSCEEEEETTTTE
T ss_pred CCCcEEECCCCCCCc-ccceEEEEcCCEEEEECCCCCCCCEEEEECCCC--ceEEccCCCCCCCcccceeEEEEeCCCCE
Confidence 87532 21111111 112233323777888877554 6899998762 2222221 1122233555555344
Q ss_pred EEEEEeC--C-----CcEEEEEcCCCce-----eEEecC---cCCCCEEEEEEcCCCCEEEEEEcC--------CeEEEE
Q psy13969 344 LFSSGGA--D-----GSIMFWHVGADKE-----VGCIPQ---AHDNIIWTMAWHPLGHILATGSND--------HASKFW 400 (877)
Q Consensus 344 ~l~sgs~--d-----g~I~iwd~~~~~~-----~~~~~~---~h~~~V~~v~~sp~g~~l~sg~~d--------g~v~iw 400 (877)
+++.|+. + ..|.+||+.+... ...+.. .......++. ..++++++.|+.+ ..|.+|
T Consensus 553 iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~y 631 (695)
T 2zwa_A 553 GIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKY-ITPRKLLIVGGTSPSGLFDRTNSIISL 631 (695)
T ss_dssp EEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEE-EETTEEEEECCBCSSCCCCTTTSEEEE
T ss_pred EEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEE-eCCCEEEEECCccCCCCCCCCCeEEEE
Confidence 7777765 2 3588999987761 122211 1111222233 3336677777743 457888
Q ss_pred eCCC
Q psy13969 401 TRNR 404 (877)
Q Consensus 401 d~~~ 404 (877)
|..+
T Consensus 632 d~~t 635 (695)
T 2zwa_A 632 DPLS 635 (695)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 8764
No 357
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=90.39 E-value=19 Score=37.57 Aligned_cols=196 Identities=13% Similarity=0.090 Sum_probs=110.1
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCCeEEEEeC---CCc-------c---eEEEccCCCCeeEE-EEcC--CCCEEEEEECCC
Q psy13969 159 DCAVRHMVWSHNGLWMVTSDHQGYIKYWQS---NMN-------N---VKTFQGHKESIRGI-SFSP--SDSKFATCSDDG 222 (877)
Q Consensus 159 ~~~V~~l~~spd~~~l~sg~~dg~v~iwd~---~~~-------~---~~~~~~h~~~V~~i-~~sp--~~~~l~sgs~Dg 222 (877)
...+..+........|+.-+..|.++.... ... . +..+. ....|.++ .+.. +..++++++.+|
T Consensus 41 ~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G 119 (327)
T 3uc1_A 41 DDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNG 119 (327)
T ss_dssp GGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTS
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCC
Confidence 344555555555566666677777766542 111 0 11122 23445544 4432 577999999999
Q ss_pred cEEEEeccCCee-------eEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCC--CC---------ceeEEecc
Q psy13969 223 TVRVWDFYRCTE-------EKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPK--AG---------QALATLHA 284 (877)
Q Consensus 223 ~I~iwd~~~~~~-------~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~--~~---------~~~~~~~~ 284 (877)
.|+...+..... ...+.. .+.+..+........|+..+..|. ++.+.+. .- .....+.
T Consensus 120 ~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~--~~rf~~~~~eip~~gr~a~Gv~~i~L~- 195 (327)
T 3uc1_A 120 LVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQ--SIRFSATDEALRPMGRATSGVQGMRFN- 195 (327)
T ss_dssp EEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSE--EEEEECCTTTSCCCCTTSBCEESSCCC-
T ss_pred EEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCe--EEEEECcccccCcCCcCCCCeeeecCC-
Confidence 999998754322 222333 344555555555667888888887 7766554 21 1111222
Q ss_pred CCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCc------ceEEEe--cCCCCeEEEEEcCCCCcEEEEEeCCCcEEE
Q psy13969 285 HKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSS------EVQTFR--GHKKEASAVAWHPQHEGLFSSGGADGSIMF 356 (877)
Q Consensus 285 h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~------~~~~~~--~h~~~v~~i~~~p~~~~~l~sgs~dg~I~i 356 (877)
....|.++....+..+|++.+..|.++...+..... -+..+. .-...+..+....... -++..+.++.+..
T Consensus 196 ~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~-~i~l~T~~G~~ir 274 (327)
T 3uc1_A 196 IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDS-ELYAVTSGGGVIR 274 (327)
T ss_dssp TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTC-EEEEEEGGGCEEE
T ss_pred CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCc-cEEEEcCCCeEEE
Confidence 245677776666667899999999999888654221 112221 1123444444443333 3444567777777
Q ss_pred EEcC
Q psy13969 357 WHVG 360 (877)
Q Consensus 357 wd~~ 360 (877)
+++.
T Consensus 275 ~~~~ 278 (327)
T 3uc1_A 275 TAAR 278 (327)
T ss_dssp EEGG
T ss_pred Eehh
Confidence 7764
No 358
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=89.39 E-value=25 Score=37.56 Aligned_cols=228 Identities=12% Similarity=0.120 Sum_probs=123.0
Q ss_pred CEEEEEeCCCeEEEEeCCC---------cce---EEEcc-CCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCC------
Q psy13969 172 LWMVTSDHQGYIKYWQSNM---------NNV---KTFQG-HKESIRGISFSPSDSKFATCSDDGTVRVWDFYRC------ 232 (877)
Q Consensus 172 ~~l~sg~~dg~v~iwd~~~---------~~~---~~~~~-h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~------ 232 (877)
.+.++-..++.|+.|-.+. ... ..+.. ....+..++++.-..+.++.+.|+.|+.|-....
T Consensus 63 ~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g 142 (389)
T 3kci_A 63 QTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 142 (389)
T ss_dssp TEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSS
T ss_pred CeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCC
Confidence 4455566788888885321 111 11111 2234556777766778888889999999954321
Q ss_pred -----eeeEEecc-CCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCC-c----------eeEEecc-CCCCeeEEEE
Q psy13969 233 -----TEEKVLRG-HGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG-Q----------ALATLHA-HKSTVMDLAW 294 (877)
Q Consensus 233 -----~~~~~l~~-h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~-~----------~~~~~~~-h~~~V~~l~~ 294 (877)
.....+.. ....|..|+.. ..+.++...++. |+.|-.... + ....+.. ....|..|+.
T Consensus 143 ~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~--v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~ 218 (389)
T 3kci_A 143 NRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGD--LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIAC 218 (389)
T ss_dssp SCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSC--EEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE
T ss_pred CCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCe--EEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEE
Confidence 11122221 22356666654 345555667887 999954321 0 1111111 2235666665
Q ss_pred ccCCCeEEEEeCCCeEEEEEcCCCCcc----------eEEEec-CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCc
Q psy13969 295 NQNGNWLVTASRDHLLKVFDIRNLSSE----------VQTFRG-HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADK 363 (877)
Q Consensus 295 sp~g~~l~s~s~Dg~I~iwd~~~~~~~----------~~~~~~-h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~ 363 (877)
.....+.++...|+.|+.|-.....++ ...+.. ....|..|+.... ..++-..|+.|+.|=....-
T Consensus 219 G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~---hs~alt~~G~v~~wG~n~~G 295 (389)
T 3kci_A 219 GSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ---FSVALTKSGAVYTWGKGDYH 295 (389)
T ss_dssp CCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETT---EEEEEETTSCEEEEECCGGG
T ss_pred cCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCC---EEEEEeCCCeEEEEeCCCCC
Confidence 443456777788999999964321111 111111 1224666665543 33344689999999764311
Q ss_pred -----------eeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCC
Q psy13969 364 -----------EVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDP 408 (877)
Q Consensus 364 -----------~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~ 408 (877)
....+.......|..|+... ...++...|+.|+.|=.+..+..
T Consensus 296 qLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~--~h~~al~~~G~v~~wG~n~~GqL 349 (389)
T 3kci_A 296 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQL 349 (389)
T ss_dssp TTCSSSCCCEEEEEECGGGTTCCEEEEEECS--SEEEEEETTCCEEEEECCTTSTT
T ss_pred CCCCCCCccccCCeEeccCCCCCEEEEEecc--CeEEEECCCCCEEEeeCCCCCcC
Confidence 11112112234577776543 34555678999999988765443
No 359
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=88.79 E-value=28 Score=37.24 Aligned_cols=225 Identities=12% Similarity=0.064 Sum_probs=110.1
Q ss_pred CEEEEEeCCCeEEEEeCCC---------cceEE---Ecc-CCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCC------
Q psy13969 172 LWMVTSDHQGYIKYWQSNM---------NNVKT---FQG-HKESIRGISFSPSDSKFATCSDDGTVRVWDFYRC------ 232 (877)
Q Consensus 172 ~~l~sg~~dg~v~iwd~~~---------~~~~~---~~~-h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~------ 232 (877)
..++.-..|++|+.|=.+. ..+.. +.. ....|..|+- -..+.+....|+.|+.|=....
T Consensus 11 ~~~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~i~~i~~--G~~~~~~l~~~G~v~~wG~n~~GqLG~g 88 (389)
T 3kci_A 11 RENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG--GEQTLFAVTADGKLYATGYGAGGRLGIG 88 (389)
T ss_dssp ----------CEEEEEECTTSTTSSCSCSEEEEEEECHHHHHTCEEEEEE--ETTEEEEEETTSCEEEEECCGGGTTSSS
T ss_pred ccceeECCCCeEEEeeCCCCccCCCCcCccccCCEecccccCCceEEEEe--CCCeEEEEcCCCcEEEEECCCCCCCCCC
Confidence 4455566778888884321 11111 000 0113444443 3456677788999999954321
Q ss_pred -----eeeEEecc-CCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCC-----------ceeEEeccC-CCCeeEEEE
Q psy13969 233 -----TEEKVLRG-HGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG-----------QALATLHAH-KSTVMDLAW 294 (877)
Q Consensus 233 -----~~~~~l~~-h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~-----------~~~~~~~~h-~~~V~~l~~ 294 (877)
.....+.. ....+..++.+.-..+.+.-..|+. |+.|-.... .....+... ...|..|+.
T Consensus 89 ~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~--v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~ 166 (389)
T 3kci_A 89 GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE--VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 166 (389)
T ss_dssp SSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSC--EEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE
T ss_pred CcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCC--EEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEe
Confidence 11122221 2234555666665666677778888 999954321 111122211 224555554
Q ss_pred ccCCCeEEEEeCCCeEEEEEcCCCCcc----------eEEEec-CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCc
Q psy13969 295 NQNGNWLVTASRDHLLKVFDIRNLSSE----------VQTFRG-HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADK 363 (877)
Q Consensus 295 sp~g~~l~s~s~Dg~I~iwd~~~~~~~----------~~~~~~-h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~ 363 (877)
. ..+.++...|+.|+.|-.....++ ...+.. ....|..|+...... ..++-..|+.|+.|-....-
T Consensus 167 G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~-~t~~l~~~G~v~~wG~n~~G 243 (389)
T 3kci_A 167 G--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA-QTLCLTDDDTVWSWGDGDYG 243 (389)
T ss_dssp C--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSC-EEEEEETTTEEEEEECCGGG
T ss_pred C--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCc-EEEEEccCCEEEEEeCCCCC
Confidence 3 455666778999999965321110 011111 223566666543223 34455689999999754311
Q ss_pred -----------eeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCC
Q psy13969 364 -----------EVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRL 405 (877)
Q Consensus 364 -----------~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~ 405 (877)
....+.......|..|+... ...++-..|+.|+.|=.+..
T Consensus 244 qLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~--~hs~alt~~G~v~~wG~n~~ 294 (389)
T 3kci_A 244 KLGRGGSDGCKVPMKIDSLTGLGVVKVECGS--QFSVALTKSGAVYTWGKGDY 294 (389)
T ss_dssp TTSSSSCCCEEEEEECGGGTTSCEEEEEEET--TEEEEEETTSCEEEEECCGG
T ss_pred CCCCCCCCCccccEEecccCCCcEEEEeCCC--CEEEEEeCCCeEEEEeCCCC
Confidence 11112112233466666543 34555578999999987643
No 360
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=87.47 E-value=29 Score=35.88 Aligned_cols=190 Identities=10% Similarity=0.102 Sum_probs=109.6
Q ss_pred CCCCEEEEEECCCcEEEEeccCCeeeE---------EeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCC---CC-
Q psy13969 210 PSDSKFATCSDDGTVRVWDFYRCTEEK---------VLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPK---AG- 276 (877)
Q Consensus 210 p~~~~l~sgs~Dg~I~iwd~~~~~~~~---------~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~---~~- 276 (877)
++..++++.+.+|.|+-..+....... .+. ..+.+..+........++..+..|. ++.+... ..
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lk-e~D~l~~~~~~~~~~~ll~~T~~G~--~~~~~~~~ip~~~ 82 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLN-DGDEIVIALCVNTHDYLFMISNEGK--LYLINAYEIKDSS 82 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEEETTCEEEEEETTSE--EEEEEGGGSCC--
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccC-CCCEEEEEEEECCCCEEEEEECCCe--EEEEEHHHCCCCC
Confidence 456688999999999988775432211 122 2234555555555667777788887 6655432 21
Q ss_pred -----ce---eEEeccCCCCeeEEEEcc---CCCeEEEEeCCCeEEEEEcCCCCc------ceEEEecCCCCeEEEEEcC
Q psy13969 277 -----QA---LATLHAHKSTVMDLAWNQ---NGNWLVTASRDHLLKVFDIRNLSS------EVQTFRGHKKEASAVAWHP 339 (877)
Q Consensus 277 -----~~---~~~~~~h~~~V~~l~~sp---~g~~l~s~s~Dg~I~iwd~~~~~~------~~~~~~~h~~~v~~i~~~p 339 (877)
.. ...+.. ...|.++.... +..+|+..+..|.++...+..... ....+.. ...+..+....
T Consensus 83 r~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~ 160 (312)
T 1suu_A 83 RASKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVF 160 (312)
T ss_dssp -----CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEEC
T ss_pred ccCCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeC
Confidence 11 011222 23444443322 467899999999999988754211 1112222 34555555554
Q ss_pred CCCcEEEEEeCCCcEEEEEcCCCc-------eeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCC
Q psy13969 340 QHEGLFSSGGADGSIMFWHVGADK-------EVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRL 405 (877)
Q Consensus 340 ~~~~~l~sgs~dg~I~iwd~~~~~-------~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~ 405 (877)
... .++..+.+|.+..+.+..-. =+..+.......|.++....++..|++.+..|.++...++..
T Consensus 161 ~~~-~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~ 232 (312)
T 1suu_A 161 KDE-KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKI 232 (312)
T ss_dssp TTC-EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGS
T ss_pred CCC-EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHHh
Confidence 344 45667789998888874311 111221123455667666556677888999999999988653
No 361
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=86.48 E-value=30 Score=35.04 Aligned_cols=197 Identities=10% Similarity=0.056 Sum_probs=111.8
Q ss_pred CCCeeEEEEcCCCCEEEEEECCCcEEEEec---cCCeeeEEeccCCCCeEEEEEcC-CCCEEEEEecCCcccEEEEcCCC
Q psy13969 200 KESIRGISFSPSDSKFATCSDDGTVRVWDF---YRCTEEKVLRGHGADVKCVDWHP-YKSLIVSGSKDNQQPVKLWDPKA 275 (877)
Q Consensus 200 ~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~---~~~~~~~~l~~h~~~v~~v~~sp-~~~~l~sgs~dg~~~I~iwd~~~ 275 (877)
.+.+..+.......+|+.-+++|.++...+ ........+. ....|..+.... +..+++..+.+|. |+...+..
T Consensus 23 gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~--iKr~~l~~ 99 (276)
T 3no0_A 23 KAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGY--VKKIPLAE 99 (276)
T ss_dssp CCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSE--EEEEEGGG
T ss_pred CCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCE--EEEEEHHH
Confidence 345655555445556777778888776543 2221111132 345566664421 4678999999998 88876543
Q ss_pred Cc------eeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCc--------ceEEEecCCCCeEEEEEcCCC
Q psy13969 276 GQ------ALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSS--------EVQTFRGHKKEASAVAWHPQH 341 (877)
Q Consensus 276 ~~------~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~--------~~~~~~~h~~~v~~i~~~p~~ 341 (877)
-. ....+.. ...+..+........|+..+..+.+..++...... ....+.. ...|..+....+.
T Consensus 100 ~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~ 177 (276)
T 3no0_A 100 FEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGE 177 (276)
T ss_dssp TTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSC
T ss_pred hhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCC
Confidence 21 1112222 34566665555666888999999988887643211 1111222 2455555544444
Q ss_pred CcEEEEEeCCCcEEEEEcCC-------CceeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEE--EeCCC
Q psy13969 342 EGLFSSGGADGSIMFWHVGA-------DKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKF--WTRNR 404 (877)
Q Consensus 342 ~~~l~sgs~dg~I~iwd~~~-------~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~i--wd~~~ 404 (877)
. .++..+..|.++...+.. ++-+..+ .....+..+....+...|+..+.+|.+.. ++++.
T Consensus 178 ~-~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i--~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 178 P-YLLVITAKGRVKKISHEEIPKTNRGVKGTEVS--GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp S-EEEEEETTSCEEEEEGGGSCCCCTTCCCEECC--CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred C-EEEEEeCCCcEEEeEHHHcccCCCCCcceEEE--cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 4 566778899999888642 1223333 22334555444334456777788888877 77653
No 362
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=86.14 E-value=38 Score=35.92 Aligned_cols=231 Identities=11% Similarity=0.013 Sum_probs=127.4
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCC---------cceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccC-------
Q psy13969 168 SHNGLWMVTSDHQGYIKYWQSNM---------NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYR------- 231 (877)
Q Consensus 168 spd~~~l~sg~~dg~v~iwd~~~---------~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~------- 231 (877)
-++..++++.+.+|.|+--.++. .....-....+.+..+........|+..+..|.++.+....
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~ 83 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN 83 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence 46778899999999999864211 11112223355666666666667788888889888776432
Q ss_pred --CeeeEE---eccCCCCeEEEEEcC---CCCEEEEEecCCcccEEEEcCCCC-------ceeEEeccCCCCeeEEEEcc
Q psy13969 232 --CTEEKV---LRGHGADVKCVDWHP---YKSLIVSGSKDNQQPVKLWDPKAG-------QALATLHAHKSTVMDLAWNQ 296 (877)
Q Consensus 232 --~~~~~~---l~~h~~~v~~v~~sp---~~~~l~sgs~dg~~~I~iwd~~~~-------~~~~~~~~h~~~V~~l~~sp 296 (877)
+..+.. |. ....|.++.... +..+|+.++..|. ++...+... .....+.. ...+..+....
T Consensus 84 a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~--vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~ 159 (370)
T 3l6v_A 84 ARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGT--VKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTD 159 (370)
T ss_dssp SCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSE--EEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEEC
T ss_pred cCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCe--EEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeC
Confidence 211111 22 234555544332 3568999999998 887765321 11222322 34455555545
Q ss_pred CCCeEEEEeCCCeEEEEEcCCCCcc------eE--EEecCCCCeEEEEEcCC----------------------------
Q psy13969 297 NGNWLVTASRDHLLKVFDIRNLSSE------VQ--TFRGHKKEASAVAWHPQ---------------------------- 340 (877)
Q Consensus 297 ~g~~l~s~s~Dg~I~iwd~~~~~~~------~~--~~~~h~~~v~~i~~~p~---------------------------- 340 (877)
....|+..+.++.+..|+....... +. .+. ....|.++.....
T Consensus 160 ~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~ 238 (370)
T 3l6v_A 160 GDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLA-KGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVI 238 (370)
T ss_dssp SCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEECCC---------------------------
T ss_pred CCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeC-CCCEEEEEEEecccccccccccccccccccccccccccccc
Confidence 5567888888898888875431110 11 111 2234444444331
Q ss_pred ------CCcEEEEEeCCCcEEEEEcCCCc-------eeEEec-CcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCC
Q psy13969 341 ------HEGLFSSGGADGSIMFWHVGADK-------EVGCIP-QAHDNIIWTMAWHPLGHILATGSNDHASKFWTRN 403 (877)
Q Consensus 341 ------~~~~l~sgs~dg~I~iwd~~~~~-------~~~~~~-~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~ 403 (877)
....+++.+..|..+...+..-. =+..+. ......|..+.+..+...|+..+..|.+.-..++
T Consensus 239 ~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v~ 315 (370)
T 3l6v_A 239 DVADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVRTRGS 315 (370)
T ss_dssp --------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEEEEGG
T ss_pred ccccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEEeeHh
Confidence 22356778889988888774321 112221 1122345554444444566666777776666654
No 363
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=84.77 E-value=2.8 Score=44.16 Aligned_cols=144 Identities=6% Similarity=0.046 Sum_probs=82.1
Q ss_pred CEEEEEecCCcccEEEEcCCCCceeEEeccC-CCCeeEEEEc--c-CCCeEEEE-eCCCeEEEEEcCCCCcceEEEec--
Q psy13969 255 SLIVSGSKDNQQPVKLWDPKAGQALATLHAH-KSTVMDLAWN--Q-NGNWLVTA-SRDHLLKVFDIRNLSSEVQTFRG-- 327 (877)
Q Consensus 255 ~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~h-~~~V~~l~~s--p-~g~~l~s~-s~Dg~I~iwd~~~~~~~~~~~~~-- 327 (877)
.++++++.|+. |+-+|..+++.+.++... ..++....-. + ++..++.. +.|+.|..+|..+. .....+..
T Consensus 11 ~~V~v~t~dG~--l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G-~~~~~~~~~~ 87 (339)
T 2be1_A 11 DILIAADVEGG--LHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG-LQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEETTSC--EEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE-EEEEEEEHHH
T ss_pred CEEEEEeCCCe--EEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC-cEEeeecccc
Confidence 47889999999 999999999998888653 1222221100 1 22333333 68999999997763 22222211
Q ss_pred --CCCCeEE---EEE-cC---CCCcEEEEEeCCCcEEEEEcCCCceeEEecCcCCCC------EEEEEEc-----CCCCE
Q psy13969 328 --HKKEASA---VAW-HP---QHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNI------IWTMAWH-----PLGHI 387 (877)
Q Consensus 328 --h~~~v~~---i~~-~p---~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~------V~~v~~s-----p~g~~ 387 (877)
...++.. ..+ .+ .....+++++.++++...|+.+++.+..+....... ..|.+.. ..+..
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~ 167 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENM 167 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCE
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCe
Confidence 1111211 000 00 012367899999999999999999998874332111 1111111 12357
Q ss_pred EEEEEcCCeEEEEe
Q psy13969 388 LATGSNDHASKFWT 401 (877)
Q Consensus 388 l~sg~~dg~v~iwd 401 (877)
|+.+..+..|.+.+
T Consensus 168 v~ig~~~y~v~~~~ 181 (339)
T 2be1_A 168 IVIGKTIFELGIHS 181 (339)
T ss_dssp EEEEEEEEECEECC
T ss_pred EEEecceEEEEEEC
Confidence 77788888888776
No 364
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=83.90 E-value=44 Score=34.75 Aligned_cols=227 Identities=11% Similarity=0.016 Sum_probs=125.6
Q ss_pred CEEEEEeCCCeEEEEeCCCc--------ceEEE-ccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccC---------Ce
Q psy13969 172 LWMVTSDHQGYIKYWQSNMN--------NVKTF-QGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYR---------CT 233 (877)
Q Consensus 172 ~~l~sg~~dg~v~iwd~~~~--------~~~~~-~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~---------~~ 233 (877)
.++++.+.+|.|+--.++.- -+..+ ....+.+..+........|+.-+..|.++...+.. +.
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~ 83 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQ 83 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCE
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCE
Confidence 46778888888886642210 01111 11234455555555566777777788777665421 12
Q ss_pred eeEE---eccCCCCeEEEE-EcC--CCCEEEEEecCCcccEEEEcCCCCc-------eeEEeccCCCCeeEEEEccCCCe
Q psy13969 234 EEKV---LRGHGADVKCVD-WHP--YKSLIVSGSKDNQQPVKLWDPKAGQ-------ALATLHAHKSTVMDLAWNQNGNW 300 (877)
Q Consensus 234 ~~~~---l~~h~~~v~~v~-~sp--~~~~l~sgs~dg~~~I~iwd~~~~~-------~~~~~~~h~~~V~~l~~sp~g~~ 300 (877)
.+.. +. ....|.++. +.. +..++++.+.+|. |+...+.... ....+.. ...+..+........
T Consensus 84 ~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~--iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ 159 (327)
T 3uc1_A 84 HVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGL--VKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDD 159 (327)
T ss_dssp EHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSE--EEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCE
T ss_pred EHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCE--EEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCE
Confidence 2111 22 234455543 332 4679999999998 8887654321 1222333 344555555555667
Q ss_pred EEEEeCCCeEEEEEcC--CCC---c-----ceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCC-------c
Q psy13969 301 LVTASRDHLLKVFDIR--NLS---S-----EVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGAD-------K 363 (877)
Q Consensus 301 l~s~s~Dg~I~iwd~~--~~~---~-----~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~-------~ 363 (877)
|+..+..+.+..+.+. ... . ....+. ....|.++....... .++..+..|.++.-.+..- +
T Consensus 160 ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~-~ll~~T~~G~~Krt~l~e~~~~~R~~~ 237 (327)
T 3uc1_A 160 LLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGT-YLLVATSGGYAKRTAIEEYPVQGRGGK 237 (327)
T ss_dssp EEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTC-EEEEEETTSEEEEEEGGGSCBCCTTSC
T ss_pred EEEEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCC-EEEEEeCCCcEEEEEHHHccccCcCCC
Confidence 8888999998888766 311 1 011122 234566666555444 5667788999988876321 1
Q ss_pred eeEEec-CcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 364 EVGCIP-QAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 364 ~~~~~~-~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
-+..+. ..-...+..+....+...|+..+.+|.+..++++.
T Consensus 238 G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 238 GVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp CEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred cEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 122221 11123455554444456677778888888787653
No 365
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=83.45 E-value=45 Score=34.57 Aligned_cols=231 Identities=10% Similarity=0.040 Sum_probs=124.1
Q ss_pred CCCCEEEEEeCCCeEEEEeCCC-----cceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccC---------Cee
Q psy13969 169 HNGLWMVTSDHQGYIKYWQSNM-----NNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYR---------CTE 234 (877)
Q Consensus 169 pd~~~l~sg~~dg~v~iwd~~~-----~~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~---------~~~ 234 (877)
++..++++.+.+|.|+--.+.. .....++. .+.+..+........|+..+..|.++.+.... +..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 4567788999999998775321 11112333 33444544544566788888889877776532 221
Q ss_pred eEE---eccCCCCeEEE-EEcC--CCCEEEEEecCCcccEEEEcCCCC------ceeE--EeccCCCCeeEEEEccCCCe
Q psy13969 235 EKV---LRGHGADVKCV-DWHP--YKSLIVSGSKDNQQPVKLWDPKAG------QALA--TLHAHKSTVMDLAWNQNGNW 300 (877)
Q Consensus 235 ~~~---l~~h~~~v~~v-~~sp--~~~~l~sgs~dg~~~I~iwd~~~~------~~~~--~~~~h~~~V~~l~~sp~g~~ 300 (877)
+.. +. ....|.++ .... +..+|+.++.+|. ++...+... .-+. .+.. ...+..+........
T Consensus 82 i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~--iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~ 157 (323)
T 1wp5_A 82 IANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGM--VKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNE 157 (323)
T ss_dssp GGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSE--EEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSE
T ss_pred hhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCe--EEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCE
Confidence 111 21 23345554 3332 2567889999998 888766421 1122 2222 245555555555567
Q ss_pred EEEEeCCCeEEEEEcCCCCc------ceEEEec-CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCC-------ceeE
Q psy13969 301 LVTASRDHLLKVFDIRNLSS------EVQTFRG-HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGAD-------KEVG 366 (877)
Q Consensus 301 l~s~s~Dg~I~iwd~~~~~~------~~~~~~~-h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~-------~~~~ 366 (877)
|+..+.++.+..++...... -+..+.- ....|.++.....+...+++.+..|..+..++..- +-+.
T Consensus 158 i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~ 237 (323)
T 1wp5_A 158 LFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVV 237 (323)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEE
T ss_pred EEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEE
Confidence 88889999988887653211 1111111 23446666544433314566678888887776431 1121
Q ss_pred Ee--cCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 367 CI--PQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 367 ~~--~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
.+ .......|..+....+...|+..+..|.+....++.
T Consensus 238 ~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 238 ILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp CSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred CeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence 22 111222444333333345566777778777666643
No 366
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=83.24 E-value=34 Score=39.90 Aligned_cols=196 Identities=12% Similarity=0.106 Sum_probs=100.5
Q ss_pred eEEE-EcCCCCEEEEE-ECC----CcEEEEeccCCeeeEE-ec-cCCC------CeEEEEEcCCCCEEEEEecC------
Q psy13969 204 RGIS-FSPSDSKFATC-SDD----GTVRVWDFYRCTEEKV-LR-GHGA------DVKCVDWHPYKSLIVSGSKD------ 263 (877)
Q Consensus 204 ~~i~-~sp~~~~l~sg-s~D----g~I~iwd~~~~~~~~~-l~-~h~~------~v~~v~~sp~~~~l~sgs~d------ 263 (877)
..+. +++++++++.+ |.. .+|+++|+.+++.+.. |. ..+. ....++|..+..++++....
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~ 211 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITS 211 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCT
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCc
Confidence 3444 78888876654 322 4799999998876531 11 0000 11345887444444432110
Q ss_pred -C-cccEEEEcCCCCc--eeEEeccCCCC-eeEEEEccCCCe-----EEEEeCC---CeEEEEEcCCCCcceEEEecCCC
Q psy13969 264 -N-QQPVKLWDPKAGQ--ALATLHAHKST-VMDLAWNQNGNW-----LVTASRD---HLLKVFDIRNLSSEVQTFRGHKK 330 (877)
Q Consensus 264 -g-~~~I~iwd~~~~~--~~~~~~~h~~~-V~~l~~sp~g~~-----l~s~s~D---g~I~iwd~~~~~~~~~~~~~h~~ 330 (877)
+ ...|+.|.+-+.. -...+...... ..++..+.++.+ +++.+.+ ..+.+.|+......+..+.....
T Consensus 212 ~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 291 (711)
T 4hvt_A 212 SLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSD 291 (711)
T ss_dssp TSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTT
T ss_pred CCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCc
Confidence 0 1238888776542 23334332223 334555666653 4444322 34566666532233333322222
Q ss_pred CeEEEEEcCCCCcEEEEE----------eCCCcEEEEEcCCC-------ceeEE-ecCcCCCCEEEEEEcCCCCEEEEEE
Q psy13969 331 EASAVAWHPQHEGLFSSG----------GADGSIMFWHVGAD-------KEVGC-IPQAHDNIIWTMAWHPLGHILATGS 392 (877)
Q Consensus 331 ~v~~i~~~p~~~~~l~sg----------s~dg~I~iwd~~~~-------~~~~~-~~~~h~~~V~~v~~sp~g~~l~sg~ 392 (877)
. .+..+..+. +++.. ...+.|.+.|+.+. ..... +.......|.+++|..+ .++++..
T Consensus 292 -~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~ 367 (711)
T 4hvt_A 292 -A-TLQGSFKEY-VFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATY 367 (711)
T ss_dssp -C-EEEEEETTE-EEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEE
T ss_pred -c-eEeeeECCE-EEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEE
Confidence 1 123344443 44422 13567899998763 22222 32334556888999876 6888888
Q ss_pred cCCe--EEEEeCC
Q psy13969 393 NDHA--SKFWTRN 403 (877)
Q Consensus 393 ~dg~--v~iwd~~ 403 (877)
.++. |.++++.
T Consensus 368 ~~~~~~l~~~~~~ 380 (711)
T 4hvt_A 368 DNVVAKVVTFTLE 380 (711)
T ss_dssp ETTEEEEEEECEE
T ss_pred ECCEEEEEEEECC
Confidence 8886 5556543
No 367
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=81.27 E-value=49 Score=33.43 Aligned_cols=195 Identities=11% Similarity=0.101 Sum_probs=107.8
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCeEEEEeC---CCcceEEEccCCCCeeEEEEcC-CCCEEEEEECCCcEEEEeccCCe--
Q psy13969 160 CAVRHMVWSHNGLWMVTSDHQGYIKYWQS---NMNNVKTFQGHKESIRGISFSP-SDSKFATCSDDGTVRVWDFYRCT-- 233 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~~dg~v~iwd~---~~~~~~~~~~h~~~V~~i~~sp-~~~~l~sgs~Dg~I~iwd~~~~~-- 233 (877)
+.+.++.......+|+.-+.+|.++.-.+ .......+......|.++.... +..+++..+.+|.|+...+....
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~ 103 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKSREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYK 103 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSSTTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTC
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCCCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhh
Confidence 34555544444556666677787765442 1110000122345666664421 46789999999999999876532
Q ss_pred ----eeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCC---------CceeEEeccCCCCeeEEEEccCCCe
Q psy13969 234 ----EEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKA---------GQALATLHAHKSTVMDLAWNQNGNW 300 (877)
Q Consensus 234 ----~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~---------~~~~~~~~~h~~~V~~l~~sp~g~~ 300 (877)
....+. ..+.+..+....+...|+..+..|. ++.++... +.....+.. ...|.++....+..+
T Consensus 104 ~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~--~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~ 179 (276)
T 3no0_A 104 AQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGR--VARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGEPY 179 (276)
T ss_dssp STTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSE--EEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSCSE
T ss_pred cCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCE--EEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCCCE
Confidence 112233 2345666655556667888888887 77765431 111112322 355666655556678
Q ss_pred EEEEeCCCeEEEEEcCCCCc------ceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEE--EEcC
Q psy13969 301 LVTASRDHLLKVFDIRNLSS------EVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMF--WHVG 360 (877)
Q Consensus 301 l~s~s~Dg~I~iwd~~~~~~------~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~i--wd~~ 360 (877)
|++.+..+.++...+..... -+..+ .....+..+....... .++..+.+|.+.. +++.
T Consensus 180 ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~-~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 180 LLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEV-ELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEE-EEEEEETTSCEEEEEEEGG
T ss_pred EEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCC-EEEEEcCCCeEEEeeeCHH
Confidence 99999999999988754211 12222 2233444443332222 3444556777666 6653
No 368
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=81.03 E-value=96 Score=36.66 Aligned_cols=146 Identities=5% Similarity=0.102 Sum_probs=74.3
Q ss_pred cCCEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCcceEEEccC-------CCCeeEEEEcCCC-CEEEEEECCCc----EE
Q psy13969 159 DCAVRHMVWSHN-GLWMVTSDHQGYIKYWQSNMNNVKTFQGH-------KESIRGISFSPSD-SKFATCSDDGT----VR 225 (877)
Q Consensus 159 ~~~V~~l~~spd-~~~l~sg~~dg~v~iwd~~~~~~~~~~~h-------~~~V~~i~~sp~~-~~l~sgs~Dg~----I~ 225 (877)
...|.+|+++|. ...++++...+.|...+-....-..+..+ ...|.+|++++.. ..|+++..+.. -.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 457889999884 45566666667666665333332322222 2469999998843 44544443211 23
Q ss_pred EEec-cCCeeeEEecc---------CCCCeEEEEEcCCC-CEEEEEecCCcccEEEEcCCCCceeEEecc------CCCC
Q psy13969 226 VWDF-YRCTEEKVLRG---------HGADVKCVDWHPYK-SLIVSGSKDNQQPVKLWDPKAGQALATLHA------HKST 288 (877)
Q Consensus 226 iwd~-~~~~~~~~l~~---------h~~~v~~v~~sp~~-~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~------h~~~ 288 (877)
||-. ..++.-..+.. ....+.+|+++|.. ..++++...+. |+. ....++.-..+.. ....
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~-S~DgG~TW~~~~~~~~~~~~~~~ 170 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWK-SSDRAKTWTNVTSIPDAFTNGIG 170 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEE-ESSTTSSCEEETTSCCCCSTTTC
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEE-ECCCCcccCCCccCccccCCCCC
Confidence 3322 22322222211 01135678888753 45555553433 322 2222333333321 1245
Q ss_pred eeEEEEcc-CCCeEEEEeCC
Q psy13969 289 VMDLAWNQ-NGNWLVTASRD 307 (877)
Q Consensus 289 V~~l~~sp-~g~~l~s~s~D 307 (877)
+..|.++| +...|+++..+
T Consensus 171 ~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 171 YTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEEECTTSTTCEEEEESS
T ss_pred eEEEEECCCCCCEEEEEEcC
Confidence 78899988 44566666654
No 369
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=80.75 E-value=65 Score=34.52 Aligned_cols=193 Identities=13% Similarity=0.124 Sum_probs=100.4
Q ss_pred CeeEEEEcCCCCEEEEEECC-CcEEEEeccCC-----------eeeEEecc-CCCCeEEEEEcCCCCEEEEEecCCcccE
Q psy13969 202 SIRGISFSPSDSKFATCSDD-GTVRVWDFYRC-----------TEEKVLRG-HGADVKCVDWHPYKSLIVSGSKDNQQPV 268 (877)
Q Consensus 202 ~V~~i~~sp~~~~l~sgs~D-g~I~iwd~~~~-----------~~~~~l~~-h~~~v~~v~~sp~~~~l~sgs~dg~~~I 268 (877)
.|..|+.. ..+.++...| +.|+.|=.... .....+.. ....|..|+.- ..+.++-..++. |
T Consensus 69 ~i~~va~G--~~ht~al~~~gg~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G--~~h~~alt~~G~--v 142 (406)
T 4d9s_A 69 QIVSVTCG--ADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG--DSHCLAVTMEGE--V 142 (406)
T ss_dssp CEEEEEEC--SSEEEEEETTTTEEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTSC--E
T ss_pred CEEEEEeC--cceEEEEECCCCEEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEC--hhheEEEcCCCc--E
Confidence 56666654 3344444555 48999953221 01111111 23356677654 345555667887 9
Q ss_pred EEEcCCCC-c----------eeEEeccC-CCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcc---------e-EEEe
Q psy13969 269 KLWDPKAG-Q----------ALATLHAH-KSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSE---------V-QTFR 326 (877)
Q Consensus 269 ~iwd~~~~-~----------~~~~~~~h-~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~---------~-~~~~ 326 (877)
+.|-.... + ....+... ...|..|+.. ..+.++.+.|+.|+.|-.....++ . ..+.
T Consensus 143 ~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~ 220 (406)
T 4d9s_A 143 QSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAG--AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVT 220 (406)
T ss_dssp EEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECC
T ss_pred EEeCCCCCccCCCCCCCCcccceEecccCCCcEEEEecC--CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEec
Confidence 99964321 1 11112111 2245555543 445666678999999964432211 0 1111
Q ss_pred c-CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCce-----------eEEecCcCCCCEEEEEEcCCCCEEEEEEcC
Q psy13969 327 G-HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKE-----------VGCIPQAHDNIIWTMAWHPLGHILATGSND 394 (877)
Q Consensus 327 ~-h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~-----------~~~~~~~h~~~V~~v~~sp~g~~l~sg~~d 394 (877)
. ....|..|+.... ..++-..++.|+.|-....-. ...+.......|..|+-.. ...++-..|
T Consensus 221 ~~~~~~i~~va~G~~---ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G~--~hs~alt~~ 295 (406)
T 4d9s_A 221 STGGEKMSMVACGWR---HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGW--RHTMALTSD 295 (406)
T ss_dssp CSTTCCEEEEEECSS---EEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECS--SEEEEEETT
T ss_pred ccCCceEEEEEECCC---cEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEecC--CEEEEEcCC
Confidence 1 1235666665433 334456899999997543211 1112112234466666543 355556789
Q ss_pred CeEEEEeCCCCCC
Q psy13969 395 HASKFWTRNRLGD 407 (877)
Q Consensus 395 g~v~iwd~~~~~~ 407 (877)
+.|+.|=.+..+.
T Consensus 296 G~v~~wG~n~~Gq 308 (406)
T 4d9s_A 296 GKLYGWGWNKFGQ 308 (406)
T ss_dssp SCEEEEECCTTST
T ss_pred CeEEEeeCCCCCC
Confidence 9999998776544
No 370
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=79.18 E-value=61 Score=33.28 Aligned_cols=189 Identities=10% Similarity=0.063 Sum_probs=104.1
Q ss_pred CCCEEEEEECCCcEEEEeccCCeeeE---------EeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEE---cCCCC--
Q psy13969 211 SDSKFATCSDDGTVRVWDFYRCTEEK---------VLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLW---DPKAG-- 276 (877)
Q Consensus 211 ~~~~l~sgs~Dg~I~iwd~~~~~~~~---------~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iw---d~~~~-- 276 (877)
+..++++.+.+|.|+--.+.+..... .++ ..+.+..+........|+..+..|. ++.+ ++...
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~k-e~D~l~~~~~~~~~~~ll~fT~~G~--~~~~~~~elp~~~~ 78 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIK-EEDFIDRLLVANTHDHILCFSSRGR--VYSMKVYQLPEATR 78 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSE--EEEEEGGGSCCCCS
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeC-CCCEEEEEEEECCCCEEEEEECCCE--EEEEEhhHCcCCCC
Confidence 45678899999999887765432211 122 2233444444445566666777776 5544 33321
Q ss_pred ----ceeE---EeccCCCCeeEEEE-c--cCCCeEEEEeCCCeEEEEEcCCCCc------ceEEEecCCCCeEEEEEcCC
Q psy13969 277 ----QALA---TLHAHKSTVMDLAW-N--QNGNWLVTASRDHLLKVFDIRNLSS------EVQTFRGHKKEASAVAWHPQ 340 (877)
Q Consensus 277 ----~~~~---~~~~h~~~V~~l~~-s--p~g~~l~s~s~Dg~I~iwd~~~~~~------~~~~~~~h~~~v~~i~~~p~ 340 (877)
..+. .+. ....|.++.. . .+..+|+..+.+|.++...+..... ....+..+ ..+..+.....
T Consensus 79 ~a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~ 156 (307)
T 1zi0_A 79 GARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSG 156 (307)
T ss_dssp SSCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECT
T ss_pred CCCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCC
Confidence 1111 122 2345655543 2 3456899999999999997753211 11123333 45555544444
Q ss_pred CCcEEEEEeCCCcEEEEEcCCCc-------eeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCC
Q psy13969 341 HEGLFSSGGADGSIMFWHVGADK-------EVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRL 405 (877)
Q Consensus 341 ~~~~l~sgs~dg~I~iwd~~~~~-------~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~ 405 (877)
.. -++..+.+|.+..+++..-. -+..+.......|.++....+...|++.+..|.++-.+++..
T Consensus 157 ~~-~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~ 227 (307)
T 1zi0_A 157 ED-EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEY 227 (307)
T ss_dssp TC-EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGS
T ss_pred CC-EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHh
Confidence 44 35556678888777764311 111121123456777765555667888999999998887543
No 371
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=76.58 E-value=72 Score=32.72 Aligned_cols=228 Identities=11% Similarity=0.050 Sum_probs=122.3
Q ss_pred CCCEEEEEeCCCeEEEEeCCCcc--------e--EEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccC--------
Q psy13969 170 NGLWMVTSDHQGYIKYWQSNMNN--------V--KTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYR-------- 231 (877)
Q Consensus 170 d~~~l~sg~~dg~v~iwd~~~~~--------~--~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~-------- 231 (877)
+..++++.+.+|.|+--.+..-. + ..++. .+.+..+........|+..+..|.++.+....
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 45678889999999876643211 0 11222 23444444444566777788888877766532
Q ss_pred -CeeeE---EeccCCCCeEEEEEc---CCCCEEEEEecCCcccEEEEcCCC-------CceeEEeccCCCCeeEEEEccC
Q psy13969 232 -CTEEK---VLRGHGADVKCVDWH---PYKSLIVSGSKDNQQPVKLWDPKA-------GQALATLHAHKSTVMDLAWNQN 297 (877)
Q Consensus 232 -~~~~~---~l~~h~~~v~~v~~s---p~~~~l~sgs~dg~~~I~iwd~~~-------~~~~~~~~~h~~~V~~l~~sp~ 297 (877)
+..+. .+. ....|.++... .+..+|+..+..|. ++...+.. +.....+..+ ..+..+.....
T Consensus 81 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~--~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~ 156 (307)
T 1zi0_A 81 RGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGT--VKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSG 156 (307)
T ss_dssp CCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSE--EEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECT
T ss_pred CCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCe--EEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCC
Confidence 22111 122 33445555432 34567888999998 88776531 1112223333 45555555455
Q ss_pred CCeEEEEeCCCeEEEEEcCCCCcc------e--EEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCC-------
Q psy13969 298 GNWLVTASRDHLLKVFDIRNLSSE------V--QTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGAD------- 362 (877)
Q Consensus 298 g~~l~s~s~Dg~I~iwd~~~~~~~------~--~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~------- 362 (877)
...|+..+.++.+..++....... + ..+. ....|.++....+.. .+++.+..|.++-.++..-
T Consensus 157 ~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~-~ll~~T~~G~~Kr~~~~e~~~~~Rg~ 234 (307)
T 1zi0_A 157 EDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRAT 234 (307)
T ss_dssp TCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSC-EEEEEETTSEEEEECGGGSCCCCTTS
T ss_pred CCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCC-EEEEEEcCCceEEEEHHHhccCCCCC
Confidence 567888888998888876432111 1 1122 234566665444444 5667788898888877321
Q ss_pred ceeEEec-CcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCC
Q psy13969 363 KEVGCIP-QAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404 (877)
Q Consensus 363 ~~~~~~~-~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~ 404 (877)
+-+..+. ......|..+....+...|+..+.+|.+.-+.++.
T Consensus 235 kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 235 KGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp CCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred CCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 1111111 11223454444433445566777788777676643
No 372
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=74.59 E-value=92 Score=33.01 Aligned_cols=132 Identities=9% Similarity=0.110 Sum_probs=78.3
Q ss_pred eEEEEeCCCc--c-eEEEcc------CCCCeeEEEEc---CC----CCEEEEEE-CCCcEEEEeccCCeeeEEeccC---
Q psy13969 182 YIKYWQSNMN--N-VKTFQG------HKESIRGISFS---PS----DSKFATCS-DDGTVRVWDFYRCTEEKVLRGH--- 241 (877)
Q Consensus 182 ~v~iwd~~~~--~-~~~~~~------h~~~V~~i~~s---p~----~~~l~sgs-~Dg~I~iwd~~~~~~~~~l~~h--- 241 (877)
.|.+||+.+. . ++.+.- ....+..|++. ++ ..++..+. ...-|.|+|+.+++.-+.+..+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5777787665 3 333321 12356778776 22 33444444 3678999999888776655310
Q ss_pred ---------------CCCeEEEEEcCC----CCEEEEEecCCcccEEEEcCC-----CC---ceeEEeccCC---CCeeE
Q psy13969 242 ---------------GADVKCVDWHPY----KSLIVSGSKDNQQPVKLWDPK-----AG---QALATLHAHK---STVMD 291 (877)
Q Consensus 242 ---------------~~~v~~v~~sp~----~~~l~sgs~dg~~~I~iwd~~-----~~---~~~~~~~~h~---~~V~~ 291 (877)
...|..|+++|+ ++.|+-....+. ++|.+. .. ..+..+ +.. ..-..
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~---~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~ 279 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI---KVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIA 279 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS---EEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC---cEEEEEHHHhhCcchhhceEEe-eecCCCCCcce
Confidence 236778888887 666666655542 333322 21 222222 222 23445
Q ss_pred EEEc-cCCCeEEEEeCCCeEEEEEcCC
Q psy13969 292 LAWN-QNGNWLVTASRDHLLKVFDIRN 317 (877)
Q Consensus 292 l~~s-p~g~~l~s~s~Dg~I~iwd~~~ 317 (877)
++++ .++.++++--....|..|+...
T Consensus 280 ~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 280 LAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 6675 6788888888889999999864
No 373
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=74.43 E-value=92 Score=32.91 Aligned_cols=191 Identities=9% Similarity=0.030 Sum_probs=108.7
Q ss_pred cCCCCEEEEEECCCcEEEEeccCC---------eeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEE---cCCC-
Q psy13969 209 SPSDSKFATCSDDGTVRVWDFYRC---------TEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLW---DPKA- 275 (877)
Q Consensus 209 sp~~~~l~sgs~Dg~I~iwd~~~~---------~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iw---d~~~- 275 (877)
-++..++++.+.+|.|+--.+.+. .....++ ....+..+........|+..+..|. ++.+ ++..
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~--~~~~~~~eip~~ 80 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGK--VFWLPVHQLPEA 80 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSE--EEEEEGGGSCBC
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCe--EEEEEHHHCcCC
Confidence 467789999999999998765321 1222333 3455666666556677777777776 5544 4432
Q ss_pred -----CceeE---EeccCCCCeeEEEE-cc--CCCeEEEEeCCCeEEEEEcCCCCc------ceEEEecCCCCeEEEEEc
Q psy13969 276 -----GQALA---TLHAHKSTVMDLAW-NQ--NGNWLVTASRDHLLKVFDIRNLSS------EVQTFRGHKKEASAVAWH 338 (877)
Q Consensus 276 -----~~~~~---~~~~h~~~V~~l~~-sp--~g~~l~s~s~Dg~I~iwd~~~~~~------~~~~~~~h~~~v~~i~~~ 338 (877)
+..+. .+. ....|.++.. .. +..+|+.++..|.++...+..... ....+.. ...+..+...
T Consensus 81 ~r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~ 158 (370)
T 3l6v_A 81 GSNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALT 158 (370)
T ss_dssp CTTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEE
T ss_pred CcccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEe
Confidence 21111 122 2345555543 22 456899999999999988754221 1112222 3344445444
Q ss_pred CCCCcEEEEEeCCCcEEEEEcCCCce-------eEEecCcCCCCEEEEEEcC----------------------------
Q psy13969 339 PQHEGLFSSGGADGSIMFWHVGADKE-------VGCIPQAHDNIIWTMAWHP---------------------------- 383 (877)
Q Consensus 339 p~~~~~l~sgs~dg~I~iwd~~~~~~-------~~~~~~~h~~~V~~v~~sp---------------------------- 383 (877)
.... .++..+.+|.+..++...-.. +..+.......|.++...+
T Consensus 159 ~~~~-~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~ 237 (370)
T 3l6v_A 159 DGDR-DVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAV 237 (370)
T ss_dssp CSCC-EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC--------------------------
T ss_pred CCCc-eEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccccccccccccccccccccccc
Confidence 4444 455566788887777632111 1111112334555554443
Q ss_pred -------CCCEEEEEEcCCeEEEEeCCCC
Q psy13969 384 -------LGHILATGSNDHASKFWTRNRL 405 (877)
Q Consensus 384 -------~g~~l~sg~~dg~v~iwd~~~~ 405 (877)
+...|++.+..|..+...+...
T Consensus 238 ~~~~~~~~~~~il~vTe~G~gKrt~~~e~ 266 (370)
T 3l6v_A 238 IDVADNGDVAYILTATENGYGKRTPLAEY 266 (370)
T ss_dssp ---------CEEEEEETTSEEEEEEGGGS
T ss_pred cccccccCCceEEEeeCCCCEEEEEHHHh
Confidence 3468999999999998887654
No 374
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=73.29 E-value=90 Score=32.28 Aligned_cols=189 Identities=10% Similarity=0.132 Sum_probs=105.5
Q ss_pred CCCCEEEEEECCCcEEEEeccCCe----eeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEE---cCCC------C
Q psy13969 210 PSDSKFATCSDDGTVRVWDFYRCT----EEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLW---DPKA------G 276 (877)
Q Consensus 210 p~~~~l~sgs~Dg~I~iwd~~~~~----~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iw---d~~~------~ 276 (877)
++..++++.+.+|.|+--.+...+ ....++ ..+.+..+........|+..+..|. ++.+ ++.. +
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~Gr--~~~~~~~elp~~~r~a~G 79 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMK-DTDRLLAMLEMNTKDVLLLFTNKGN--YLYCPVHELPDIRWKDLG 79 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCC-TTCCEEEEEEEETTSEEEEEETTSE--EEEEEGGGSCBCCTTSCC
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccC-CCCEEEEEEEECCCCEEEEEECCCE--EEEEEHHHCcCCCCCCCC
Confidence 456678999999999987654221 111233 2334444444445666777777776 5544 3332 2
Q ss_pred ceeE---EeccCCCCeeEE-EEcc--CCCeEEEEeCCCeEEEEEcCCCCc-----ceE--EEecCCCCeEEEEEcCCCCc
Q psy13969 277 QALA---TLHAHKSTVMDL-AWNQ--NGNWLVTASRDHLLKVFDIRNLSS-----EVQ--TFRGHKKEASAVAWHPQHEG 343 (877)
Q Consensus 277 ~~~~---~~~~h~~~V~~l-~~sp--~g~~l~s~s~Dg~I~iwd~~~~~~-----~~~--~~~~h~~~v~~i~~~p~~~~ 343 (877)
..+. .+. ....|.++ .... +..+|+.++.+|.++...+..... -+. .+.. ...+..+.......
T Consensus 80 ~~i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~- 156 (323)
T 1wp5_A 80 QHIANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMN- 156 (323)
T ss_dssp EEGGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCS-
T ss_pred cChhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCC-
Confidence 2111 121 23345554 3432 256899999999999998753211 111 1222 24555555444444
Q ss_pred EEEEEeCCCcEEEEEcCCCc-------eeEEecCcCCCCEEEEEEcCCCC-EEEEEEcCCeEEEEeCCC
Q psy13969 344 LFSSGGADGSIMFWHVGADK-------EVGCIPQAHDNIIWTMAWHPLGH-ILATGSNDHASKFWTRNR 404 (877)
Q Consensus 344 ~l~sgs~dg~I~iwd~~~~~-------~~~~~~~~h~~~V~~v~~sp~g~-~l~sg~~dg~v~iwd~~~ 404 (877)
-++..+.+|.+..+++..-. -+..+.......|.++....++. .|++.+..|..+..+++.
T Consensus 157 ~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 157 ELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 45566788888888764311 11222112344566665544444 788889999988877764
No 375
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=72.80 E-value=1.1e+02 Score=32.91 Aligned_cols=233 Identities=10% Similarity=-0.002 Sum_probs=119.3
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCc-------------ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEE
Q psy13969 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN-------------NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVW 227 (877)
Q Consensus 161 ~V~~l~~spd~~~l~sg~~dg~v~iwd~~~~-------------~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iw 227 (877)
.|..|+.. ..+.++-..++.|+.|-.+.. ..-........|..|+.. ..+.++...|+.|+.|
T Consensus 76 ~v~~va~G--~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~~~i~~va~G--~~hs~al~~~G~v~~w 151 (423)
T 3mvd_K 76 DAVDISAG--GMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAG--DSHSACLLEDGRVFAW 151 (423)
T ss_dssp SEEEEEEC--SSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECCCSSCEEEEEEC--SSEEEEEETTSCEEEE
T ss_pred CceEEeeC--CCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEcCCCCEEEEEcC--cCeEEEEeCCCeEEEE
Confidence 35444443 445666678889999953210 011111123356666554 4566667889999999
Q ss_pred ec--cC-Ce---------eeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCCC-------------------
Q psy13969 228 DF--YR-CT---------EEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG------------------- 276 (877)
Q Consensus 228 d~--~~-~~---------~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~------------------- 276 (877)
-. .. ++ ...........|..|+.. ..+.++-..++. |+.|=....
T Consensus 152 G~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G--~~hs~alt~~G~--v~~wG~n~~GqLG~~~~~~~~~~~~~~~ 227 (423)
T 3mvd_K 152 GSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASG--ADHLVILTTAGK--VFTVGCAEQGQLGRLSERSISGEGRRGK 227 (423)
T ss_dssp ECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEEC--SSEEEEEETTSC--EEEEECCTTSTTSSCCTTTTTSCSTTTT
T ss_pred eCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecC--CCeEEEEecCCe--EEEeeCCcCCccCCCccccccccccccc
Confidence 75 21 11 111111123456666654 334555567877 999853211
Q ss_pred ----ceeEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcc----------eEEEecCCCCeEEEEEcCCCC
Q psy13969 277 ----QALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSE----------VQTFRGHKKEASAVAWHPQHE 342 (877)
Q Consensus 277 ----~~~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~----------~~~~~~h~~~v~~i~~~p~~~ 342 (877)
............|..|+... ...++.-+.|+.|+.|-.....++ ..........|..|+....
T Consensus 228 ~~~~~p~~v~~~~~~~v~~i~~g~-~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G~~-- 304 (423)
T 3mvd_K 228 RDLLRPTQLIITRAKPFEAIWATN-YCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQH-- 304 (423)
T ss_dssp TTTSSCEEECCTTCCCEEEEEEET-TEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEECSS--
T ss_pred ccccCCeEEeecCCccEEEEEECC-cEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEcccC--
Confidence 11111111223455554432 222333367888998865432111 1111111345666665433
Q ss_pred cEEEEEeCCCcEEEEEcCCC---------c---eeEEecCcCCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCCCCC
Q psy13969 343 GLFSSGGADGSIMFWHVGAD---------K---EVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDP 408 (877)
Q Consensus 343 ~~l~sgs~dg~I~iwd~~~~---------~---~~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~~~~ 408 (877)
..++-..|+.|+.|=.... . ....+ ......|..|+.... ..++...|+.|+.|=.+..+..
T Consensus 305 -ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v-~~l~~~v~~ia~G~~--hs~alt~~G~v~~wG~n~~GqL 378 (423)
T 3mvd_K 305 -HTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIV-KKLTEKIVSVGCGEV--CSYAVTIDGKLYSWGSGVNNQL 378 (423)
T ss_dssp -EEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEEC-TTCCSCEEEEEEETT--EEEEEETTSCEEEEECCTTSCS
T ss_pred -eEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEe-ccCCCCEEEEEcCCC--eEEEEcCCCCEEEECCCCCCCC
Confidence 3344567999999975321 1 11122 222236777776543 4444578999999987765443
No 376
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=68.67 E-value=78 Score=38.36 Aligned_cols=37 Identities=19% Similarity=0.226 Sum_probs=32.7
Q ss_pred CeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEe
Q psy13969 244 DVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATL 282 (877)
Q Consensus 244 ~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~ 282 (877)
.|.+++..++..++++.|.|++ +++|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~--LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYK--LKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCE--EEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCE--EEEEECCCCCeEeee
Confidence 5677888888889999999999 999999999988775
No 377
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=64.68 E-value=2.2e+02 Score=33.47 Aligned_cols=147 Identities=14% Similarity=0.155 Sum_probs=74.6
Q ss_pred CCCeeEEEEcCC-CCEEEEEECCCcEEEEeccCCeeeEEeccC-------CCCeEEEEEcCCC-CEEEEEecC-C----c
Q psy13969 200 KESIRGISFSPS-DSKFATCSDDGTVRVWDFYRCTEEKVLRGH-------GADVKCVDWHPYK-SLIVSGSKD-N----Q 265 (877)
Q Consensus 200 ~~~V~~i~~sp~-~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h-------~~~v~~v~~sp~~-~~l~sgs~d-g----~ 265 (877)
...|.+|+++|. ...++++...+.|...+ ..++.-..+..+ ...|.+|+++|.. ..++++..+ . .
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 357999999985 35666677777766554 223322222221 2469999999853 444444322 1 1
Q ss_pred ccEEEEcCCCCceeEEecc---------CCCCeeEEEEccC-CCeEEEEeCCCeEEEEEcCCCCcceEEEec------CC
Q psy13969 266 QPVKLWDPKAGQALATLHA---------HKSTVMDLAWNQN-GNWLVTASRDHLLKVFDIRNLSSEVQTFRG------HK 329 (877)
Q Consensus 266 ~~I~iwd~~~~~~~~~~~~---------h~~~V~~l~~sp~-g~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~------h~ 329 (877)
..+.....++.-..+.. ....+..|+++|. ...++++...+. ||-.....+....+.. ..
T Consensus 93 --~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~TW~~~~~~~~~~~~~ 168 (789)
T 1sqj_A 93 --AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAKTWTNVTSIPDAFTNG 168 (789)
T ss_dssp --EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTSSCEEETTSCCCCSTT
T ss_pred --EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCcccCCCccCccccCCC
Confidence 22233333443333211 0113567888874 345555553433 3333322233333221 12
Q ss_pred CCeEEEEEcCCCCcEEEEEeCC
Q psy13969 330 KEASAVAWHPQHEGLFSSGGAD 351 (877)
Q Consensus 330 ~~v~~i~~~p~~~~~l~sgs~d 351 (877)
..+..|.++|.....++++..+
T Consensus 169 ~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 169 IGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TCEEEEEECTTSTTCEEEEESS
T ss_pred CCeEEEEECCCCCCEEEEEEcC
Confidence 4578899988654344444444
No 378
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=63.10 E-value=2.3e+02 Score=33.04 Aligned_cols=103 Identities=8% Similarity=0.056 Sum_probs=53.1
Q ss_pred CEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCcceEEEccC-------CCCeeEEEEcCC-CCEEEEEECC-------CcE
Q psy13969 161 AVRHMVWSHNG-LWMVTSDHQGYIKYWQSNMNNVKTFQGH-------KESIRGISFSPS-DSKFATCSDD-------GTV 224 (877)
Q Consensus 161 ~V~~l~~spd~-~~l~sg~~dg~v~iwd~~~~~~~~~~~h-------~~~V~~i~~sp~-~~~l~sgs~D-------g~I 224 (877)
.|..|+++|.. ..|+++...+.|+.++-....-..+..+ ...|.+|+++|. .+.|+++... ...
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~ 103 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMG 103 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCc
Confidence 68888998853 4555566566666665333333333222 245899999983 3444444321 124
Q ss_pred EEEeccC-CeeeEEec-cC--------CCCeEEEEEcCCC-CEEEEEecC
Q psy13969 225 RVWDFYR-CTEEKVLR-GH--------GADVKCVDWHPYK-SLIVSGSKD 263 (877)
Q Consensus 225 ~iwd~~~-~~~~~~l~-~h--------~~~v~~v~~sp~~-~~l~sgs~d 263 (877)
.||.... ++.-..+. .. ...+.+|+++|.. ..|+++...
T Consensus 104 ~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 104 AILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp EEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred cEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 4554322 22211111 11 0124679998864 566666533
No 379
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=58.91 E-value=1.9e+02 Score=30.82 Aligned_cols=190 Identities=13% Similarity=0.049 Sum_probs=100.0
Q ss_pred CeeEEEEcCCCCEEEEEECCCcEEEEeccCC-------------eeeEEeccCCCCeEEEEEcCCCCEEEEEecCCcccE
Q psy13969 202 SIRGISFSPSDSKFATCSDDGTVRVWDFYRC-------------TEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPV 268 (877)
Q Consensus 202 ~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~-------------~~~~~l~~h~~~v~~v~~sp~~~~l~sgs~dg~~~I 268 (877)
.|..|+.. ..+.+....|+.|+.|=.... .....+. ....|..|+... .+.++...|+. |
T Consensus 76 ~v~~va~G--~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~-~~~~i~~va~G~--~hs~al~~~G~--v 148 (423)
T 3mvd_K 76 DAVDISAG--GMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPGKALCISAGD--SHSACLLEDGR--V 148 (423)
T ss_dssp SEEEEEEC--SSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECC-CSSCEEEEEECS--SEEEEEETTSC--E
T ss_pred CceEEeeC--CCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEc-CCCCEEEEEcCc--CeEEEEeCCCe--E
Confidence 46555553 567777788999999954321 0111111 233566666543 34455567887 9
Q ss_pred EEEcC--CC-Cce---------eEEeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCC-----------------
Q psy13969 269 KLWDP--KA-GQA---------LATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLS----------------- 319 (877)
Q Consensus 269 ~iwd~--~~-~~~---------~~~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~----------------- 319 (877)
+.|-. .. ++. .-........|..|+.. ..+.++.+.|+.|+.|-.....
T Consensus 149 ~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~ 226 (423)
T 3mvd_K 149 FAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASG--ADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRG 226 (423)
T ss_dssp EEEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTT
T ss_pred EEEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecC--CCeEEEEecCCeEEEeeCCcCCccCCCcccccccccccc
Confidence 99875 21 111 11111123346555543 3456667789999999643211
Q ss_pred -----cceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCcee-----------EEecCcCCCCEEEEEEcC
Q psy13969 320 -----SEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEV-----------GCIPQAHDNIIWTMAWHP 383 (877)
Q Consensus 320 -----~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~-----------~~~~~~h~~~V~~v~~sp 383 (877)
.+..........|..|+.... +.++.-..|+.|+.|-......+ ..+ ......|..|+-..
T Consensus 227 ~~~~~~p~~v~~~~~~~v~~i~~g~~--~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~-~~~~~~v~~ia~G~ 303 (423)
T 3mvd_K 227 KRDLLRPTQLIITRAKPFEAIWATNY--CTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPI-KTELKDIRHIAGGQ 303 (423)
T ss_dssp TTTTSSCEEECCTTCCCEEEEEEETT--EEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEE-EECCCSEEEEEECS
T ss_pred cccccCCeEEeecCCccEEEEEECCc--EEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeE-EcCCCCeEEEEccc
Confidence 111111112234566655432 23333357899999975432111 111 01134566666543
Q ss_pred CCCEEEEEEcCCeEEEEeCCCC
Q psy13969 384 LGHILATGSNDHASKFWTRNRL 405 (877)
Q Consensus 384 ~g~~l~sg~~dg~v~iwd~~~~ 405 (877)
...++-..|+.|+.|=.+..
T Consensus 304 --~ht~alt~~G~v~~wG~n~~ 323 (423)
T 3mvd_K 304 --HHTVILTTDLKCSVVGRPEY 323 (423)
T ss_dssp --SEEEEEETTCCEEEEECCGG
T ss_pred --CeEEEEeCCCcEEEEECCCC
Confidence 35556678999999987643
No 380
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=53.63 E-value=3.6e+02 Score=32.43 Aligned_cols=37 Identities=8% Similarity=0.073 Sum_probs=29.8
Q ss_pred CeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEe
Q psy13969 331 EASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCI 368 (877)
Q Consensus 331 ~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~ 368 (877)
.+.+++..++.. +++|-+.|++++||++.+++++...
T Consensus 237 ~~~~~~~~~~~~-~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTT-EEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCc-EEEEEECCCEEEEEECCCCCeEeee
Confidence 456667666655 7888899999999999999888764
No 381
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=52.28 E-value=2.3e+02 Score=34.94 Aligned_cols=37 Identities=32% Similarity=0.381 Sum_probs=29.1
Q ss_pred CeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEEE
Q psy13969 288 TVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTF 325 (877)
Q Consensus 288 ~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~~ 325 (877)
.|.+++...+..++++-+.|+++||||+.+ ..++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t-~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLST-NQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTT-TEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCC-CCeEEee
Confidence 455566677888999999999999999988 5555553
No 382
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=48.33 E-value=2.1e+02 Score=28.21 Aligned_cols=140 Identities=14% Similarity=0.120 Sum_probs=78.1
Q ss_pred EEEEEeCCCeEEEEeCCCc--ceEEEccCCCCeeEEEEcCCCCEEEEEECCCcEEEEeccCC-------eee---EEecc
Q psy13969 173 WMVTSDHQGYIKYWQSNMN--NVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRC-------TEE---KVLRG 240 (877)
Q Consensus 173 ~l~sg~~dg~v~iwd~~~~--~~~~~~~h~~~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~-------~~~---~~l~~ 240 (877)
.+++.+.+|.|+--....- ....+.... .+..+........|+..+..|.++.+.+..- ..+ ..+.
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~D-~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~- 81 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAGD-SFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP- 81 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTTC-CEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC-
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCCC-EEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC-
Confidence 4566777888776553321 111233333 3444444334456777788888877765321 111 1122
Q ss_pred CCCCeEEEEEcCCCCEEEEEecCCcccEEEEcCCC-------CceeEEeccCCCCeeEEEEc-cCCCeEEEEeCCCeEEE
Q psy13969 241 HGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKA-------GQALATLHAHKSTVMDLAWN-QNGNWLVTASRDHLLKV 312 (877)
Q Consensus 241 h~~~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~-------~~~~~~~~~h~~~V~~l~~s-p~g~~l~s~s~Dg~I~i 312 (877)
....|.++....+..+|+.++..|. ++...+.. +..+..+.. ...+..+... .....|+..+.++.+..
T Consensus 82 ~~e~Iv~~~~~~~~~~lll~T~~G~--~Kr~~~~e~~~~~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lr 158 (256)
T 1zvt_A 82 PGATVDHMLMESDDQKLLMASDAGY--GFVCTFNDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLM 158 (256)
T ss_dssp TTCCEEEEECCCTTCEEEEEBTTSE--EEEEEGGGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEE
T ss_pred CCCEEEEEEEeCCCCEEEEEeCCCe--EEEeEHHHhcccCcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEE
Confidence 2345666644345667888899998 88776532 222223332 2345554444 34557888888888888
Q ss_pred EEcCC
Q psy13969 313 FDIRN 317 (877)
Q Consensus 313 wd~~~ 317 (877)
|++..
T Consensus 159 f~~~e 163 (256)
T 1zvt_A 159 FPVSD 163 (256)
T ss_dssp EEGGG
T ss_pred EEHHH
Confidence 87754
No 383
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=42.38 E-value=2.5e+02 Score=31.69 Aligned_cols=59 Identities=8% Similarity=0.112 Sum_probs=38.7
Q ss_pred eEEEEEcCCCCcEEEEEeCC------------CcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEE
Q psy13969 332 ASAVAWHPQHEGLFSSGGAD------------GSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATG 391 (877)
Q Consensus 332 v~~i~~~p~~~~~l~sgs~d------------g~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg 391 (877)
.-.|+|++.+. |+++-..+ ..+.+.+..+++....+.......++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 35689999988 66554322 2345555556655544433456789999999998877664
No 384
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=39.15 E-value=2.9e+02 Score=27.18 Aligned_cols=104 Identities=9% Similarity=-0.022 Sum_probs=55.2
Q ss_pred eEEEEeCCCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCC-------CceeE-EecCc
Q psy13969 300 WLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGA-------DKEVG-CIPQA 371 (877)
Q Consensus 300 ~l~s~s~Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~-------~~~~~-~~~~~ 371 (877)
.+++.+.+|.|+--...........+.... .+..+........+++ .+..|.++-+.+.. +..+. .+...
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~D-~l~~~~~~~t~~~ll~-~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~ 81 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAGD-SFKAAVKGKSNQPVVF-VDSTGRSYAIDPITLPSARGQGEPLTGKLTLP 81 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTTC-CEEEEEEEETTSCEEE-EETTSEEEEECGGGSCCSSSCCEEGGGTCCCC
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCCC-EEEEEEEeCCCCEEEE-EeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC
Confidence 456677778777665544221112233333 3333333333333443 45677766554421 22111 11112
Q ss_pred CCCCEEEEEEcCCCCEEEEEEcCCeEEEEeCCCC
Q psy13969 372 HDNIIWTMAWHPLGHILATGSNDHASKFWTRNRL 405 (877)
Q Consensus 372 h~~~V~~v~~sp~g~~l~sg~~dg~v~iwd~~~~ 405 (877)
....|.++....+..+|+.++..|.++...++..
T Consensus 82 ~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~ 115 (256)
T 1zvt_A 82 PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDL 115 (256)
T ss_dssp TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGG
T ss_pred CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHh
Confidence 3456777754445677888999999999988653
No 385
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=38.23 E-value=5.2e+02 Score=29.85 Aligned_cols=59 Identities=17% Similarity=0.173 Sum_probs=34.8
Q ss_pred CeeEEEEcCCC-CEEEEEECCCcEEEEeccCCeeeEEeccC-------CCCeEEEEEcCCC-CEEEEEe
Q psy13969 202 SIRGISFSPSD-SKFATCSDDGTVRVWDFYRCTEEKVLRGH-------GADVKCVDWHPYK-SLIVSGS 261 (877)
Q Consensus 202 ~V~~i~~sp~~-~~l~sgs~Dg~I~iwd~~~~~~~~~l~~h-------~~~v~~v~~sp~~-~~l~sgs 261 (877)
.|..|+++|.. ..|+++...+.|..++= .++.-..+..+ ...|.+|+++|.. +.|+++.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D-~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~ 91 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDP-STETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVA 91 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEET-TTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEE
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCC-CCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEe
Confidence 78999999864 45666666666666542 23222222221 2458999999843 4444443
No 386
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=37.58 E-value=5.5e+02 Score=29.87 Aligned_cols=238 Identities=10% Similarity=0.035 Sum_probs=105.1
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEeCCC----c--ceEEEc-cC-CCCeeEEEEcCC-C-CEEEEEECCCcEEEEeccC
Q psy13969 162 VRHMVWSHNGLWMVTSDHQGYIKYWQSNM----N--NVKTFQ-GH-KESIRGISFSPS-D-SKFATCSDDGTVRVWDFYR 231 (877)
Q Consensus 162 V~~l~~spd~~~l~sg~~dg~v~iwd~~~----~--~~~~~~-~h-~~~V~~i~~sp~-~-~~l~sgs~Dg~I~iwd~~~ 231 (877)
+..|.++|....++.+...+..+-.|... . ....+. .- ...+..+ .+|. + ..|+++..|.-...|+-.+
T Consensus 397 ~~~l~i~P~~~~~~~g~~~gi~~S~d~g~~~~g~~~tw~~~~~gl~~~~~~~~-~sp~~~~~~l~~~~~d~gg~~~~~~~ 475 (763)
T 3a0f_A 397 LAAILLDPFSDRLLYGTGAVIWATDAVSRADSNQAPSWYINTEGIEETAILVL-KSPPAGPAHLFSGMYDLGGMRHDDFS 475 (763)
T ss_dssp CCCEEECTTSSCEEEECSSCEEEESCGGGGGGTCCCCEEECCTTCBCCBEEEE-ECCSSSSCSCEEEETTTBCBBCSCTT
T ss_pred eeeEEECCCCCeEEEecCceEEeECCCcccccCCcceeEECcCCcceeeeeeE-EcCCCCCceeEEEEccCCceEecCCc
Confidence 56788888655555554433333333210 1 111111 11 1122333 3443 2 4566665554444444221
Q ss_pred CeeeEEeccCCCCeEEEEEcCCC--CEEEEEecC---------CcccEEEEcCCCCceeEEeccC-----CCCeeEEEEc
Q psy13969 232 CTEEKVLRGHGADVKCVDWHPYK--SLIVSGSKD---------NQQPVKLWDPKAGQALATLHAH-----KSTVMDLAWN 295 (877)
Q Consensus 232 ~~~~~~l~~h~~~v~~v~~sp~~--~~l~sgs~d---------g~~~I~iwd~~~~~~~~~~~~h-----~~~V~~l~~s 295 (877)
..........-..+..|+|++.. .+++++..| +. |.+- ...++....+... ...+..++++
T Consensus 476 ~~~~~~~~~~~~~~~~i~~a~~~~~~~~~vG~~d~~~~~~~~~g~--i~~S-~DgG~tW~~~~~~~~g~~~~~~~~i~v~ 552 (763)
T 3a0f_A 476 VPQPMYSKPTFSSTDGLDFAGRAANVLARVGRNDHPDAGVAGCTQ--GAYT-TNSGDSWTLFQTCVPSLEVGNGGTIAVG 552 (763)
T ss_dssp SCCCBCCSSCCSEEEEEEEETTEEEEEEEEEECSSCCTTCCSCTT--EEEE-SSTTSSCEECSSCCTTCBTTBCCEEEEC
T ss_pred cCCccccCCccccccceEeccCCCcEEEEEeCCCcccccccCCCc--EEEE-CCCCcCCccCCCCCcccccCCcceEEEe
Confidence 11110001122346788998754 355666664 44 5443 3334333333211 2347788888
Q ss_pred cCCC-eEEEEeC--CCeEEEEEcCCCCcceEEEecCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCceeEEecCcC
Q psy13969 296 QNGN-WLVTASR--DHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAH 372 (877)
Q Consensus 296 p~g~-~l~s~s~--Dg~I~iwd~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h 372 (877)
+++. .+.+++. +..| |-..........+......+..|..++....+|+++. ++.|++ ..+.++....+....
T Consensus 553 ~~~~~~~~~~~~~~~~~v--~~S~D~G~tW~~~~~l~~~~~~i~~d~~~~~~~y~g~-~g~v~~-S~DgG~tW~~~~~~l 628 (763)
T 3a0f_A 553 ADGKTFVWSPSKADGKGP--YTSSDYGKTWTAPSGLSKQTTGIAADRVQANTFYVYV-EGDFFV-STDGGKSYTKKGNGL 628 (763)
T ss_dssp TTSSCEEEECSSCCSSCC--EEESSTTSCCBCCBSCCCCCSCEEECSSSTTCEEEEE-TTEEEE-ESSTTSBCEEECBTS
T ss_pred cCCCcEEEEecccCCCce--EEeCCCCCCCeecCCCCCCcceEEEeccCCCEEEEEc-CCCEEE-EeCCCcCccccccCC
Confidence 8654 4444442 4433 3222212222222222222356777887666677664 565543 334444443331111
Q ss_pred ----CCCEEEEEEcCC-CCEEEEEEcCCeEEEEeCCCCCCCcc
Q psy13969 373 ----DNIIWTMAWHPL-GHILATGSNDHASKFWTRNRLGDPMR 410 (877)
Q Consensus 373 ----~~~V~~v~~sp~-g~~l~sg~~dg~v~iwd~~~~~~~~~ 410 (877)
..... |.+++. ...|+.+...+. ||.....+..+.
T Consensus 629 p~~~~~~~~-i~~~~~~~~~l~~~~~~~~--l~~S~D~G~tW~ 668 (763)
T 3a0f_A 629 PCCWTYTGT-PVTSNLRAGELWVSVKGVG--IYHSTDFGNTFT 668 (763)
T ss_dssp CCSSCCCEE-EEECSSSTTCEEEEETTTE--EEEESSTTSBCE
T ss_pred CcccCcccc-EEECCCCCCcEEEEcCCCe--EEEEcCCCCCce
Confidence 11222 777763 233434444443 454444444443
No 387
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=35.77 E-value=95 Score=38.48 Aligned_cols=38 Identities=18% Similarity=0.224 Sum_probs=31.7
Q ss_pred CeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEec
Q psy13969 244 DVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLH 283 (877)
Q Consensus 244 ~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~ 283 (877)
.+.+++...+..++++-|.|++ ++|||+.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~--LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYK--LKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCE--EEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCE--EEEEECCCCCeEEeec
Confidence 4456667778889999999999 9999999999887753
No 388
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=34.99 E-value=4.3e+02 Score=27.86 Aligned_cols=193 Identities=12% Similarity=0.102 Sum_probs=101.9
Q ss_pred CeeEEEEcCCCCEEEEEECCCcEEEEeccCCe-----------eeEEecc-CCCCeEEEEEcCCCCEEEEEecCCcccEE
Q psy13969 202 SIRGISFSPSDSKFATCSDDGTVRVWDFYRCT-----------EEKVLRG-HGADVKCVDWHPYKSLIVSGSKDNQQPVK 269 (877)
Q Consensus 202 ~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~-----------~~~~l~~-h~~~v~~v~~sp~~~~l~sgs~dg~~~I~ 269 (877)
.|..|+.. ..+.++...|+.|+.|-....- ....+.. ....|..|+.. ..+.++...++. |+
T Consensus 122 ~i~~ia~G--~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G--~~hs~alt~~G~--v~ 195 (406)
T 4d9s_A 122 RIKQIACG--DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAG--AEHTAAVTEDGD--LY 195 (406)
T ss_dssp CEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTSC--EE
T ss_pred CEEEEEEC--hhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCcEEEEecC--CCeEEEEeCCCC--EE
Confidence 56666654 4566677889999999643211 1111221 12356666654 344555567887 99
Q ss_pred EEcCCCC----------c-eeEEecc-CCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcc----------eEEEec
Q psy13969 270 LWDPKAG----------Q-ALATLHA-HKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSE----------VQTFRG 327 (877)
Q Consensus 270 iwd~~~~----------~-~~~~~~~-h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~----------~~~~~~ 327 (877)
.|-.... . ....+.. ....|..|+.. ..+.++.+.|+.|+.|-.....++ ...+..
T Consensus 196 ~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G--~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~ 273 (406)
T 4d9s_A 196 GWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG--WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEA 273 (406)
T ss_dssp EEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEEC--SSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGG
T ss_pred EeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEEC--CCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecc
Confidence 9953321 0 1111111 12345555443 345566678899999965432211 011111
Q ss_pred -CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEEcCCCce-----------eEEecCcCCCCEEEEEEcCCCCEEEEEEcCC
Q psy13969 328 -HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKE-----------VGCIPQAHDNIIWTMAWHPLGHILATGSNDH 395 (877)
Q Consensus 328 -h~~~v~~i~~~p~~~~~l~sgs~dg~I~iwd~~~~~~-----------~~~~~~~h~~~V~~v~~sp~g~~l~sg~~dg 395 (877)
....|..|+.... ..++-..|+.|+.|=....-. ...+.......|..|+.-. ...++-..|+
T Consensus 274 ~~~~~v~~i~~G~~---hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va~G~--~hs~alt~~G 348 (406)
T 4d9s_A 274 LSNSFISQISGGWR---HTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGW--RHTLAVTERN 348 (406)
T ss_dssp GTTSCEEEEEECSS---EEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEEECS--SEEEEEETTS
T ss_pred cCCCCEEEEEecCC---EEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEEeCC--CeEEEEeCCC
Confidence 1234666665433 334446899999997543211 1112112234566666543 3555567899
Q ss_pred eEEEEeCCCCCC
Q psy13969 396 ASKFWTRNRLGD 407 (877)
Q Consensus 396 ~v~iwd~~~~~~ 407 (877)
.|+.|=.+..+.
T Consensus 349 ~v~~wG~n~~Gq 360 (406)
T 4d9s_A 349 NVFAWGRGTNGQ 360 (406)
T ss_dssp CEEEEECCTTST
T ss_pred CEEEecCCCCCc
Confidence 999998765443
No 389
>4ftd_A Uncharacterized protein; 6-bladed-beta-propeller, immunoglobulin-like, carbohydrate metabolism, structural genomics; 1.91A {Bacteroides eggerthii}
Probab=32.11 E-value=5e+02 Score=27.82 Aligned_cols=218 Identities=6% Similarity=0.007 Sum_probs=102.4
Q ss_pred cCCeEEEEEccCCceeeccCCEEEEEEcCCCCEEEEEe-CCCeEEEEeC-------C--CcceEE-----EccCCCCeeE
Q psy13969 141 RCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSD-HQGYIKYWQS-------N--MNNVKT-----FQGHKESIRG 205 (877)
Q Consensus 141 ~~~i~~~~~sp~g~~l~h~~~V~~l~~spd~~~l~sg~-~dg~v~iwd~-------~--~~~~~~-----~~~h~~~V~~ 205 (877)
+..+..+.|...-..++ ....++..|..+ +++.++ .+-.|+.|+- . ...... +.++.- +.+
T Consensus 118 r~~s~~~~~~~~~~~~g-~~~trG~~~~s~--~V~v~~r~~~~v~~~dHll~~~~~~ag~~~~~~l~~TGvsGgtf-~~~ 193 (453)
T 4ftd_A 118 KPTVYNFSGDNIYSDFA-TNYTRCASYDGE--HVLVVSRPTTPNFHTPHLLKVSDLKRGEIKPIMLDVTGVKGGTY-DYN 193 (453)
T ss_dssp SCEEEEEEGGGCCGGGG-STTEEEEEECSS--EEEEEECCCTTTCCCSEEEEHHHHHTTCCCCEECCCTTCCCSSE-EEE
T ss_pred cCccceecccccchhhc-cccccccccCCc--eEEEEecCCceEEecccccchhhcccCcccccccccceeeccce-EEE
Confidence 34466777877665555 455778888654 444433 4445555551 0 111111 122222 233
Q ss_pred EEEcCCCCEEEEEE---CCCcEEEEeccC--CeeeEEeccC----------CCCeEEEEEcCCCCEEEEEecCCcccEEE
Q psy13969 206 ISFSPSDSKFATCS---DDGTVRVWDFYR--CTEEKVLRGH----------GADVKCVDWHPYKSLIVSGSKDNQQPVKL 270 (877)
Q Consensus 206 i~~sp~~~~l~sgs---~Dg~I~iwd~~~--~~~~~~l~~h----------~~~v~~v~~sp~~~~l~sgs~dg~~~I~i 270 (877)
+.-..++..+++-- ....++||...+ ......+... ...-.++.-+.+++-+++........+..
T Consensus 194 m~a~~~G~Iy~anLsg~~gs~fkIYrW~~~ts~Pe~i~s~~v~~~~gTg~R~Gd~isv~GD~~gNa~I~~~~n~s~~~~r 273 (453)
T 4ftd_A 194 MGALINGHVYLSSLSGGKVSPFKIYYWETPTSNPEVIANINVGNIPGAGNRHGDNASYNIDENGNGFIFFGDNAATEFLK 273 (453)
T ss_dssp EEEEETTEEEEEEEBCSTTSCEEEEEESSTTSCCEEEEEECGGGSTTCCSCBCSCCEEEECTTSCEEEEEEBTTSSEEEE
T ss_pred EEEecCCCEEEEeccCCCCCceEEEEeCCCCCCceeEEEeccccCCcccccccceEEEEEcCCCCEEEEECCCCceeEEE
Confidence 44344555554421 234566666543 3333332111 01224566666676444455555445788
Q ss_pred EcCCCCce-----eE--EeccCCCCeeEEEEccCCCeEEEEeCCCeEEEEEcCCCCcceEE-EecCCCCeEEEEEcCCCC
Q psy13969 271 WDPKAGQA-----LA--TLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQT-FRGHKKEASAVAWHPQHE 342 (877)
Q Consensus 271 wd~~~~~~-----~~--~~~~h~~~V~~l~~sp~g~~l~s~s~Dg~I~iwd~~~~~~~~~~-~~~h~~~v~~i~~~p~~~ 342 (877)
|.+..+.. .. ...........+.+--+-.+++..+.+-.+.+++..- ...... +.........+.|.-. +
T Consensus 274 wtVtng~l~~~~~~~v~~~~~~g~~~~~v~~~gnT~~y~~sg~~~p~~Ly~~~g-~~~~~sai~~~a~~~~vv~FN~~-r 351 (453)
T 4ftd_A 274 VPISGHKTVDIGNIKVLPSKSDATMVTNVYRVGDTDQYLWSGIRVPVTLVDESL-GEKYKSKIAGEAVAPKVVTFNEE-R 351 (453)
T ss_dssp EEEETTTEECGGGCEEEECCGGGCSSEEEEECTTSSCEEEEETTEEEEEECTTC-CEEEECSCCTTEEEEEEEEETTE-E
T ss_pred EEEECCeEcCCCCceeeccCCCceeeeeeEEcCcccceeeccccCceeEEecCC-CEEEeeeccccCCCcceEEEccc-c
Confidence 88776543 11 1122233455555544323455555555677777553 221111 0111112334555433 3
Q ss_pred cEEEEE-e------CCCcEEEEEcCCCce
Q psy13969 343 GLFSSG-G------ADGSIMFWHVGADKE 364 (877)
Q Consensus 343 ~~l~sg-s------~dg~I~iwd~~~~~~ 364 (877)
+|+++. . .+-.|+|||+.++..
T Consensus 352 YLi~~~~~~~g~~~~~~~l~vYDIS~g~~ 380 (453)
T 4ftd_A 352 YLLVCTAGQGAASKASIALEVYDLTKGET 380 (453)
T ss_dssp EEEEEECCBSTTCCCCCEEEEEECCSSSS
T ss_pred EEEEEEecccCccCCCceEEEEECCCCcc
Confidence 234322 1 123799999987553
No 390
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=29.56 E-value=1.6e+02 Score=32.99 Aligned_cols=61 Identities=7% Similarity=0.086 Sum_probs=39.5
Q ss_pred CeEEEEEcCCCCcEEEEEeC------------CCcEEEEEcCCCceeEEecCcCCCCEEEEEEcCCCCEEEEEE
Q psy13969 331 EASAVAWHPQHEGLFSSGGA------------DGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGS 392 (877)
Q Consensus 331 ~v~~i~~~p~~~~~l~sgs~------------dg~I~iwd~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l~sg~ 392 (877)
....|+|++++. |+++... ...|..++..+++....+.......++.++|+||++.|+++-
T Consensus 477 sPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 456799999987 5553321 114666666666654444222345689999999998877664
No 391
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=28.00 E-value=1.9e+02 Score=32.35 Aligned_cols=60 Identities=15% Similarity=0.223 Sum_probs=42.2
Q ss_pred CCEEEEEEcCCCCEEEEEeCC------------CeEEEEeCCCcceEEEcc-C-CCCeeEEEEcCCCCEEEEEE
Q psy13969 160 CAVRHMVWSHNGLWMVTSDHQ------------GYIKYWQSNMNNVKTFQG-H-KESIRGISFSPSDSKFATCS 219 (877)
Q Consensus 160 ~~V~~l~~spd~~~l~sg~~d------------g~v~iwd~~~~~~~~~~~-h-~~~V~~i~~sp~~~~l~sgs 219 (877)
.....|+|.+++.+.++.+.. ..|..++.....++.+.. . ...++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 457789999999888754321 256666766666655442 2 35689999999998887764
No 392
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=27.83 E-value=73 Score=36.78 Aligned_cols=37 Identities=14% Similarity=0.211 Sum_probs=30.3
Q ss_pred CeeEEEEcCCCCEEEEEECCCcEEEEeccCCeeeEEecc
Q psy13969 202 SIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRG 240 (877)
Q Consensus 202 ~V~~i~~sp~~~~l~sgs~Dg~I~iwd~~~~~~~~~l~~ 240 (877)
.|.++.+ +..+|+|-+.|.++|+||+.+++++.+..-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4666666 377999999999999999999988777654
No 393
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=24.36 E-value=1.7e+02 Score=32.98 Aligned_cols=58 Identities=16% Similarity=0.291 Sum_probs=40.7
Q ss_pred eeEEEEcCCCCEEEEEECC------------CcEEEEeccCCeeeEEeccC-CCCeEEEEEcCCCCEEEEE
Q psy13969 203 IRGISFSPSDSKFATCSDD------------GTVRVWDFYRCTEEKVLRGH-GADVKCVDWHPYKSLIVSG 260 (877)
Q Consensus 203 V~~i~~sp~~~~l~sgs~D------------g~I~iwd~~~~~~~~~l~~h-~~~v~~v~~sp~~~~l~sg 260 (877)
.-.|+|++.++++++-..+ ..+.+.+..+++..+.+..+ ...++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3568999999866654332 24566666677776666654 4679999999999877654
No 394
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=21.42 E-value=99 Score=35.69 Aligned_cols=37 Identities=14% Similarity=0.391 Sum_probs=30.0
Q ss_pred CeEEEEEcCCCCEEEEEecCCcccEEEEcCCCCceeEEecc
Q psy13969 244 DVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHA 284 (877)
Q Consensus 244 ~v~~v~~sp~~~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~ 284 (877)
.|.|+.+. ..+|++-|.|++ +++||+++++++.+...
T Consensus 223 ~Is~~~~~--~~fLftL~~Dh~--LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLFH--ERYLIVLTQNCH--LKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEET--TTEEEEEETTCE--EEEEETTTTEEEEEEET
T ss_pred eEEEeccC--CcEEEEEEcCCe--EEEEEcCCCceEEeecc
Confidence 46666554 679999999999 99999999998877644
No 395
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=20.28 E-value=1e+03 Score=27.42 Aligned_cols=148 Identities=10% Similarity=0.039 Sum_probs=71.1
Q ss_pred ccCCEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCcceEEEcc------------CCCCeeEEEEcCC-CCEEEEEECC--
Q psy13969 158 HDCAVRHMVWSHNG-LWMVTSDHQGYIKYWQSNMNNVKTFQG------------HKESIRGISFSPS-DSKFATCSDD-- 221 (877)
Q Consensus 158 h~~~V~~l~~spd~-~~l~sg~~dg~v~iwd~~~~~~~~~~~------------h~~~V~~i~~sp~-~~~l~sgs~D-- 221 (877)
-...|.+|+++|.. ..++++...+.|...+-....-..+.. ....|.+|+++|. ...|+++...
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~ 98 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYV 98 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCT
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccc
Confidence 45678999999854 556566656665555422222121111 2245899999883 3444443321
Q ss_pred ---CcEEEEec-cCCeeeEEecc-C------CC--CeEEEEEcCCC-CEEEEEecCCcccEEEEcCCCCceeEEecc---
Q psy13969 222 ---GTVRVWDF-YRCTEEKVLRG-H------GA--DVKCVDWHPYK-SLIVSGSKDNQQPVKLWDPKAGQALATLHA--- 284 (877)
Q Consensus 222 ---g~I~iwd~-~~~~~~~~l~~-h------~~--~v~~v~~sp~~-~~l~sgs~dg~~~I~iwd~~~~~~~~~~~~--- 284 (877)
....||.. ..++.-..+.. . .. .+..|+++|.. ..++++...+. |+. ....++.-..+..
T Consensus 99 ~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~--l~~-S~DgG~TW~~~~~~~~ 175 (763)
T 3a0f_A 99 QWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQG--LWR-STDRAQTWSRMNQLPD 175 (763)
T ss_dssp TTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSC--EEE-ESSTTSSCEECTTSCC
T ss_pred cCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCc--EEE-ECCCCcCccccccCcc
Confidence 12333432 22322111111 0 11 12468888753 45555554433 332 2223333333221
Q ss_pred ---CCCCeeEEEEccC-CCeEEEEeCCC
Q psy13969 285 ---HKSTVMDLAWNQN-GNWLVTASRDH 308 (877)
Q Consensus 285 ---h~~~V~~l~~sp~-g~~l~s~s~Dg 308 (877)
....+..|+++|. ...|+++..++
T Consensus 176 ~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 176 SSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp CSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred cCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 1134778899874 34566666554
Done!