RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13969
(877 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 126 bits (317), Expect = 1e-32
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 25/239 (10%)
Query: 140 MRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIK-YWQSNMNNVKTFQG 198
+ HD V + NG +V++ IK + VKTF G
Sbjct: 82 TIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 141
Query: 199 HKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKS--- 255
H+E +R + + + A+CS+D TVRVW + LR H V+C+ W P S
Sbjct: 142 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSS 201
Query: 256 -----------------LIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNG 298
++SGS+D +K+WD G L TL H + V + ++ G
Sbjct: 202 ISEATGSETKKSGKPGPFLLSGSRDKT--IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 259
Query: 299 NWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFW 357
++++ + D L+V+D +N ++T H+ +++ +H +G D ++ W
Sbjct: 260 KFILSCADDKTLRVWDYKN-KRCMKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVW 316
Score = 122 bits (305), Expect = 6e-31
Identities = 55/303 (18%), Positives = 105/303 (34%), Gaps = 50/303 (16%)
Query: 143 PIFSMTWTPEGRRLA---HDCAVR----------------------HMVWSHNGLWMVTS 177
P+ + + P + D ++ L S
Sbjct: 19 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS 78
Query: 178 DHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKV 237
+ ++T GH ++ +S P+ + S D T+++W+ K
Sbjct: 79 ADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKT 138
Query: 238 LRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQN 297
GH V+ V + +LI S S D V++W + A L H+ V ++W
Sbjct: 139 FTGHREWVRMVRPNQDGTLIASCSNDQT--VRVWVVATKECKAELREHRHVVECISWAPE 196
Query: 298 --------------------GNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAW 337
G +L++ SRD +K++D+ + T GH V +
Sbjct: 197 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLF 255
Query: 338 HPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHAS 397
H + + S D ++ W + + + AH++ + ++ +H + TGS D
Sbjct: 256 HSGGKFIL-SCADDKTLRVWDYKNKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTV 313
Query: 398 KFW 400
K W
Sbjct: 314 KVW 316
Score = 116 bits (291), Expect = 3e-29
Identities = 53/278 (19%), Positives = 94/278 (33%), Gaps = 65/278 (23%)
Query: 184 KYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGA 243
K W GH+ + + F P S + S+D T++VWD+ E+ L+GH
Sbjct: 1 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 60
Query: 244 DVKCV------------------------------------------DWHPYKSLIVSGS 261
V+ + P IVS S
Sbjct: 61 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS 120
Query: 262 KDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSE 321
+D K+W+ + G + T H+ V + NQ+G + + S D ++V+ +
Sbjct: 121 RDKTI--KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC- 177
Query: 322 VQTFRGHKKEASAVAWHPQHEG-------------------LFSSGGADGSIMFWHVGAD 362
R H+ ++W P+ SG D +I W V
Sbjct: 178 KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 237
Query: 363 KEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFW 400
+ + HDN + + +H G + + ++D + W
Sbjct: 238 MCLMTL-VGHDNWVRGVLFHSGGKFILSCADDKTLRVW 274
Score = 112 bits (280), Expect = 1e-27
Identities = 37/177 (20%), Positives = 72/177 (40%), Gaps = 5/177 (2%)
Query: 141 RCPIFSMTWTPEGRRLA---HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQ 197
R + + +G +A +D VR V + +H+ ++ + +
Sbjct: 143 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSI 202
Query: 198 GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLI 257
+ S D T+++WD L GH V+ V +H I
Sbjct: 203 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFI 262
Query: 258 VSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD 314
+S + D +++WD K + + TL+AH+ V L +++ ++VT S D +KV++
Sbjct: 263 LSCADDKT--LRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 93.3 bits (230), Expect = 4e-21
Identities = 49/263 (18%), Positives = 85/263 (32%), Gaps = 25/263 (9%)
Query: 22 HHHHHHPRGYHGQQFHHRPNFNKNFHTPFRPFHKNPNQIMDPDFDGKKLRKSSMRKTVDY 81
H +F H + + +G + +S KT+
Sbjct: 68 DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKM 127
Query: 82 NAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNAT---------NAVTTRF 132
+ + + + P A+ V T+
Sbjct: 128 W-----------EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 176
Query: 133 VKAATNKMRCPIFSMTWTPEGRR--LAHDCAVRHMVWSHNGLWMVTSDHQGYIKYW-QSN 189
KA + R + ++W PE ++ G ++++ IK W S
Sbjct: 177 CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 236
Query: 190 MNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVD 249
+ T GH +RG+ F +C+DD T+RVWD+ K L H V +D
Sbjct: 237 GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLD 296
Query: 250 WHPYKSLIVSGSKDNQQPVKLWD 272
+H +V+GS D VK+W+
Sbjct: 297 FHKTAPYVVTGSVDQT--VKVWE 317
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 123 bits (309), Expect = 3e-31
Identities = 66/328 (20%), Positives = 104/328 (31%), Gaps = 62/328 (18%)
Query: 121 EDNATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRL-AHDCAVRHMVWSHNGLWMVTSDH 179
D + +T +MR R L H + M W + +V++
Sbjct: 26 ADATLSQITNNIDPVGRIQMRTR----------RTLRGHLAKIYAMHWGTDSRLLVSASQ 75
Query: 180 QGYIKYWQS-NMNNVKTFQGHKESIRGISFSPSDSKFATCSD------------------ 220
G + W S N V + +++PS + A
Sbjct: 76 DGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRV 135
Query: 221 ---------------------------DGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPY 253
D T +WD + GH DV + P
Sbjct: 136 SRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 254 KSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVF 313
L VSG+ D KLWD + G T H+S + + + NGN T S D ++F
Sbjct: 196 TRLFVSGACDAS--AKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLF 253
Query: 314 DIRNLSSEVQTFRGHKKEA-SAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAH 372
D+R + + ++V++ L +G D + W G + H
Sbjct: 254 DLRADQELMTYSHDNIICGITSVSFSKSGR-LLLAGYDDFNCNVWDALKADRAGVL-AGH 311
Query: 373 DNIIWTMAWHPLGHILATGSNDHASKFW 400
DN + + G +ATGS D K W
Sbjct: 312 DNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 118 bits (296), Expect = 1e-29
Identities = 30/219 (13%), Positives = 68/219 (31%), Gaps = 2/219 (0%)
Query: 140 MRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGH 199
H + + + + +S + TF GH
Sbjct: 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGH 183
Query: 200 KESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVS 259
+ +S +P F + + D + ++WD + GH +D+ + + P + +
Sbjct: 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 260 GSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLS 319
GS D + + + ++++++G L+ D V+D +
Sbjct: 244 GSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK-A 302
Query: 320 SEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWH 358
GH S + ++G D + W+
Sbjct: 303 DRAGVLAGHDNRVSCLGVTD-DGMAVATGSWDSFLKIWN 340
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 106 bits (265), Expect = 3e-25
Identities = 65/298 (21%), Positives = 121/298 (40%), Gaps = 29/298 (9%)
Query: 128 VTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVT-SDHQGYIKYW 186
V+ + A + + D +R + +S +G ++ T ++ + +
Sbjct: 90 VSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWD 149
Query: 187 QSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVK 246
N V QGH++ I + + PS K + S D TVR+WD L
Sbjct: 150 IENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTT 209
Query: 247 CVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLH-------AHKSTVMDLAWNQNGN 299
I +GS D V++WD + G + L HK +V + + ++G
Sbjct: 210 VAVSPGDGKYIAAGSLDRA--VRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ 267
Query: 300 WLVTASRDHLLKVFDIRNLSSE-----------VQTFRGHKKEASAVAWHPQHEGLFSSG 348
+V+ S D +K+++++N +++ T+ GHK +VA E + S G
Sbjct: 268 SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILS-G 326
Query: 349 GADGSIMFWHVGADKEVGCIPQAHDNIIWTMA------WHPLGHILATGSNDHASKFW 400
D ++FW + + + Q H N + ++A P ++ ATGS D ++ W
Sbjct: 327 SKDRGVLFWDKKSGNPLLML-QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIW 383
Score = 100 bits (249), Expect = 4e-23
Identities = 46/241 (19%), Positives = 84/241 (34%), Gaps = 24/241 (9%)
Query: 142 CPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKE 201
H+ + + + +G +V+ ++ W ++
Sbjct: 146 RIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIED 205
Query: 202 SIRGISFSPSDSK-FATCSDDGTVRVWDFYRC-------TEEKVLRGHGADVKCVDWHPY 253
+ ++ SP D K A S D VRVWD +E + GH V V +
Sbjct: 206 GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 265
Query: 254 KSLIVSGSKDN----------QQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVT 303
+VSGS D P +G T HK V+ +A QN ++++
Sbjct: 266 GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILS 325
Query: 304 ASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQ-----HEGLFSSGGADGSIMFWH 358
S+D + +D ++ + + +GH+ +VA +F++G D W
Sbjct: 326 GSKDRGVLFWDKKS-GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384
Query: 359 V 359
Sbjct: 385 Y 385
Score = 99.5 bits (246), Expect = 8e-23
Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 28/187 (14%)
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNV--------KTFQGHKESIRGISFS 209
D V +G ++ ++ W S + ++ GHK+S+ + F+
Sbjct: 204 EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT 263
Query: 210 PSDSKFATCSDDGTVRVWDF------------YRCTEEKVLRGHGADVKCVDWHPYKSLI 257
+ S D +V++W+ T E GH V V I
Sbjct: 264 RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYI 323
Query: 258 VSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLA------WNQNGNWLVTASRDHLLK 311
+SGSKD V WD K+G L L H+++V+ +A N T S D +
Sbjct: 324 LSGSKDRG--VLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKAR 381
Query: 312 VFDIRNL 318
++ + +
Sbjct: 382 IWKYKKI 388
Score = 98.3 bits (243), Expect = 2e-22
Identities = 71/341 (20%), Positives = 122/341 (35%), Gaps = 52/341 (15%)
Query: 104 LQPDVMYYPHMLPPPSFEDNATNAVTTRFVKAATNKMRCPIFSMTWTPEGRR-------- 155
L P H P P F + + +K TN + + P R
Sbjct: 3 LVPYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYY-----ILYNPALPREIDVELHK 57
Query: 156 -LAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQG---------------- 198
L H V + +S++G ++ T ++ Y S+ + V
Sbjct: 58 SLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSS 117
Query: 199 --HKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSL 256
IR + FSP AT ++D +R+WD +L+GH D+ +D+ P
Sbjct: 118 PSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDK 177
Query: 257 IVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIR 316
+VSG + V++WD + GQ TL +G ++ S D ++V+D
Sbjct: 178 LVSG--SGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE 235
Query: 317 N------LSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCI-- 368
L SE ++ GHK +V + + + SG D S+ W++
Sbjct: 236 TGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV-SGSLDRSVKLWNLQNANNKSDSKT 294
Query: 369 ---------PQAHDNIIWTMAWHPLGHILATGSNDHASKFW 400
H + + ++A + +GS D FW
Sbjct: 295 PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFW 335
Score = 82.5 bits (202), Expect = 3e-17
Identities = 41/272 (15%), Positives = 82/272 (30%), Gaps = 34/272 (12%)
Query: 22 HHHHHHPRGYHGQQFHHRPNFNKNFHTPFRPFHKNPNQIMDPDFDGKKLRKSSMRKTVDY 81
+ + H+ +D G KL S +TV
Sbjct: 130 SPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRI 189
Query: 82 NAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAVTTRFVKAATNKMR 141
+ +++ V + + R + T +
Sbjct: 190 W---------DLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 240
Query: 142 CPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYW-------------QS 188
+ S + G H +V +V++ +G +V+ +K W +
Sbjct: 241 ERLDSENESGTG----HKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN 296
Query: 189 NMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCV 248
+ T+ GHK+ + ++ + +D + S D V WD +L+GH V V
Sbjct: 297 SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISV 356
Query: 249 D------WHPYKSLIVSGSKDNQQPVKLWDPK 274
P ++ +GS D + ++W K
Sbjct: 357 AVANGSSLGPEYNVFATGSGDCK--ARIWKYK 386
Score = 48.6 bits (114), Expect = 2e-06
Identities = 25/179 (13%), Positives = 50/179 (27%), Gaps = 33/179 (18%)
Query: 247 CVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQ----ALATLHAHKSTVMDLAWNQNGNWLV 302
+D K L++P + L H S V + ++ +G +L
Sbjct: 20 LLDLDSQSVPDAL-KKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLA 78
Query: 303 TASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGAD 362
T + +V+ + + S V
Sbjct: 79 TGC-NKTTQVYRVSD-GSLVARLSDDSAANKDPENLNTSSS------------------- 117
Query: 363 KEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHC 421
+ D I ++ + P G LATG+ D + W M + +++ +
Sbjct: 118 -------PSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSL 169
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 99.1 bits (245), Expect = 5e-23
Identities = 51/259 (19%), Positives = 95/259 (36%), Gaps = 14/259 (5%)
Query: 140 MRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGH 199
+ T H VR M + + D + + + GH
Sbjct: 78 TLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIE-TGQCLHVLMGH 136
Query: 200 KESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVS 259
++R + + + D V+VWD T L+GH + +VS
Sbjct: 137 VAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH--TNRVYSLQFDGIHVVS 192
Query: 260 GSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLS 319
GS D +++WD + G + TL H+S + N LV+ + D +K++DI+
Sbjct: 193 GSLDTS--IRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKT-G 247
Query: 320 SEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIP----QAHDNI 375
+QT +G K SAV ++ + DG++ W + + + + +
Sbjct: 248 QCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGV 307
Query: 376 IWTMAWHPLGHILATGSND 394
+W + + A GS +
Sbjct: 308 VWRIRASNTKLVCAVGSRN 326
Score = 93.0 bits (229), Expect = 6e-21
Identities = 55/282 (19%), Positives = 95/282 (33%), Gaps = 50/282 (17%)
Query: 193 VKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHP 252
K +GH + + ++ + SDD T++VW + L GH V
Sbjct: 9 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD 67
Query: 253 --------------------------------------YKSLIVSGSKDNQQPVKLWDPK 274
++ +VSGS+D +++WD +
Sbjct: 68 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT--LRVWDIE 125
Query: 275 AGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASA 334
GQ L L H + V +G +V+ + D ++KV+D + + T +GH +
Sbjct: 126 TGQCLHVLMGHVAAVRC--VQYDGRRVVSGAYDFMVKVWDPET-ETCLHTLQGHTNRVYS 182
Query: 335 VAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSND 394
+ + H SG D SI W V CI + T +IL +G+ D
Sbjct: 183 LQFDGIH---VVSGSLDTSIRVWDVETGN---CIHTLTGHQSLTSGMELKDNILVSGNAD 236
Query: 395 HASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSA 436
K W + K + +N+ + S
Sbjct: 237 STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSD 278
Score = 84.9 bits (208), Expect = 3e-18
Identities = 59/283 (20%), Positives = 100/283 (35%), Gaps = 50/283 (17%)
Query: 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQ-SNMNNVKTFQGHKESIRGISFSPS---- 211
HD V G +V+ +K W ++T GH + +
Sbjct: 14 GHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIIS 72
Query: 212 ----------------------------------DSKFATCSDDGTVRVWDFYRCTEEKV 237
+ + + S D T+RVWD V
Sbjct: 73 GSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHV 132
Query: 238 LRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQN 297
L GH A V+C +VSG+ D VK+WDP+ L TL H + V L ++
Sbjct: 133 LMGHVAAVRC--VQYDGRRVVSGAYDFM--VKVWDPETETCLHTLQGHTNRVYSLQFD-- 186
Query: 298 GNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFW 357
G +V+ S D ++V+D+ + + T GH+ S + + SG AD ++ W
Sbjct: 187 GIHVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLTSGMELKDN---ILVSGNADSTVKIW 242
Query: 358 HVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFW 400
+ + + + + + + + T S+D K W
Sbjct: 243 DIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 285
Score = 79.5 bits (194), Expect = 2e-16
Identities = 35/168 (20%), Positives = 60/168 (35%), Gaps = 15/168 (8%)
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNN-VKTFQGHKESIRGISFSPSDSKFA 216
R +G+ +V+ I+ W N + T GH+ G+ +
Sbjct: 174 QGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILV 231
Query: 217 TCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPY-KSLIVSGSKDNQQPVKLWDPKA 275
+ + D TV++WD + L+G V + K+ +++ S D VKLWD K
Sbjct: 232 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGT--VKLWDLKT 289
Query: 276 GQALATL-----HAHKSTVMDLAWNQNGNWLVTASRDHL----LKVFD 314
G+ + L V + + SR+ L V D
Sbjct: 290 GEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 337
Score = 66.0 bits (159), Expect = 5e-12
Identities = 36/269 (13%), Positives = 64/269 (23%), Gaps = 5/269 (1%)
Query: 8 SNFSMPPPSMSGGGHHHHHHPRGYHGQQFHHRPNFNKNFHTPFRPFHKNPNQIMDPDFDG 67
+ + S + + H R + + +
Sbjct: 66 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIE 125
Query: 68 KKLRKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNA 127
+ V V V + P+ H L + +
Sbjct: 126 TGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 185
Query: 128 VTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQ 187
V + + T H M N L +D I +
Sbjct: 186 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIK 245
Query: 188 SNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLR-----GHG 242
+ +K + + T SDDGTV++WD + L G G
Sbjct: 246 TGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSG 305
Query: 243 ADVKCVDWHPYKSLIVSGSKDNQQPVKLW 271
V + K + GS++ + KL
Sbjct: 306 GVVWRIRASNTKLVCAVGSRNGTEETKLL 334
Score = 48.7 bits (114), Expect = 2e-06
Identities = 26/198 (13%), Positives = 54/198 (27%), Gaps = 31/198 (15%)
Query: 42 FNKNFHTPFRPFHKNPNQIMDPDFDGKKLRKSSMRKTVDYNAAVINALEARVWQRDYRDR 101
++ T + N++ FDG + S+ ++ RVW + +
Sbjct: 162 WDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSI------------RVWDVETGNC 209
Query: 102 RALQPDVMYYPHMLPPPSFEDNATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCA 161
+ A + ++ + + +
Sbjct: 210 IHTLTGHQSLTSGMELKD---------NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ 260
Query: 162 VRHMVWSHNGLWMVTSDHQGYIKYWQSNMNN-VKTFQ-----GHKESIRGISFSPSDSKF 215
N +++TS G +K W ++ G + I S +
Sbjct: 261 SAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVC 320
Query: 216 ATCSDDGT----VRVWDF 229
A S +GT + V DF
Sbjct: 321 AVGSRNGTEETKLLVLDF 338
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 91.1 bits (224), Expect = 4e-20
Identities = 31/270 (11%), Positives = 71/270 (26%), Gaps = 26/270 (9%)
Query: 161 AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNN---VKTFQGHKESIRGISFSPSDSKFAT 217
+ W+ + + + + ++ + N V + H + G+ ++P ++ T
Sbjct: 9 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVT 68
Query: 218 CSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDP---- 273
C D VW T + L + + + + +
Sbjct: 69 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 128
Query: 274 KAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSE------------ 321
+STV+ L W+ N L S D ++F E
Sbjct: 129 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKM 188
Query: 322 -----VQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNII 376
+ V + + D ++ V + +
Sbjct: 189 PFGELMFESSSSCGWVHGVCFSANGS-RVAWVSHDSTVCLADADKKMAVATLAS-ETLPL 246
Query: 377 WTMAWHPLGHILATGSNDHASKFWTRNRLG 406
+ + ++A G + F + G
Sbjct: 247 LAVTFITESSLVAAGHDCFPVLFTYDSAAG 276
Score = 81.4 bits (199), Expect = 6e-17
Identities = 29/214 (13%), Positives = 57/214 (26%), Gaps = 8/214 (3%)
Query: 197 QGHKESIRGISFSPSDSKFATCSDDGTVRVWDFY--RCTEEKVLRGHGADVKCVDWHPYK 254
E I +++ ++ A C ++ V +++ + + L+ H V VDW P
Sbjct: 4 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS 63
Query: 255 SLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVT--ASRDHLLKV 312
+ IV+ D +W K TL + N S ++ +
Sbjct: 64 NRIVTCGTDRN--AYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI 121
Query: 313 FDIRNLSSEVQTFRGHKKEASAV--AWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQ 370
+ K S V + L ++G D + +
Sbjct: 122 CYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAP 181
Query: 371 AHDNIIWTMAWHPLGHILATGSNDHASKFWTRNR 404
+ G +R
Sbjct: 182 TPWGSKMPFGELMFESSSSCGWVHGVCFSANGSR 215
Score = 79.1 bits (193), Expect = 4e-16
Identities = 38/314 (12%), Positives = 75/314 (23%), Gaps = 13/314 (4%)
Query: 54 HKNPNQIMDPDFDGKKLRKSSMRKTV---DYNAAVINALEARVWQRDYRDRRALQPDVMY 110
H +D D ++ + + P+
Sbjct: 50 HNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKK 109
Query: 111 YPHMLPPPSFED-NATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHM-VWS 168
+ K +R + S+ W P LA ++S
Sbjct: 110 FAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFS 169
Query: 169 HNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWD 228
+ + + G+ FS + S+ A S D TV + D
Sbjct: 170 AYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLAD 229
Query: 229 FYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKST 288
+ L + V + SL+ +G L+ + +
Sbjct: 230 ADKKMAVATLASETLPLLAVTFITESSLVAAGHDCF---PVLFTYDSAAGKLSFGGRLDV 286
Query: 289 VMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEG---LF 345
+ + D + + + HK S ++ + F
Sbjct: 287 PKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDS--LHKNSVSQISVLSGGKAKCSQF 344
Query: 346 SSGGADGSIMFWHV 359
+ G DG + W V
Sbjct: 345 CTTGMDGGMSIWDV 358
Score = 70.7 bits (171), Expect = 2e-13
Identities = 21/153 (13%), Positives = 46/153 (30%), Gaps = 3/153 (1%)
Query: 280 ATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSE-VQTFRGHKKEASAVAWH 338
A + AWN++ + +H + +++ V + H + + V W
Sbjct: 1 AYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWA 60
Query: 339 PQHEGLFSSGGADGSIMFW-HVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHAS 397
P + G D + W G + + + + W P A GS
Sbjct: 61 PDSN-RIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVI 119
Query: 398 KFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEM 430
+ D ++ +K + + +
Sbjct: 120 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPN 152
Score = 64.5 bits (155), Expect = 2e-11
Identities = 24/203 (11%), Positives = 57/203 (28%), Gaps = 7/203 (3%)
Query: 128 VTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQ 187
+ V+ + V + +S NG + H +
Sbjct: 170 AYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLAD 229
Query: 188 SNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKC 247
++ + ++S D ++ + + G K
Sbjct: 230 ADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQ 289
Query: 248 VDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNW----LVT 303
+ + D + + AG L + HK++V ++ G T
Sbjct: 290 SSQRGLTARERFQNLDKKASSE-GSAAAGAGLDS--LHKNSVSQISVLSGGKAKCSQFCT 346
Query: 304 ASRDHLLKVFDIRNLSSEVQTFR 326
D + ++D+R+L S ++ +
Sbjct: 347 TGMDGGMSIWDVRSLESALKDLK 369
Score = 64.5 bits (155), Expect = 2e-11
Identities = 36/322 (11%), Positives = 74/322 (22%), Gaps = 60/322 (18%)
Query: 143 PIFSMTWTPEGRRLA---HDCAVR----------------------------HMVWSHNG 171
+ + W P+ R+ D
Sbjct: 53 QVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAV 112
Query: 172 LWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFY- 230
Y + + + ++ + + P+ A S D R++ Y
Sbjct: 113 GSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYI 172
Query: 231 -----------------RCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDP 273
V V + S + S D+ V L D
Sbjct: 173 KEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST--VCLADA 230
Query: 274 KAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEAS 333
A+ATL + ++ + + + + +F + ++ +F G
Sbjct: 231 DKKMAVATLASETLPLLAVTFITESSLVAAGHDCFP-VLFTYDS-AAGKLSFGGRLDVPK 288
Query: 334 AVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLG----HILA 389
+ D G+ + H N + ++ G
Sbjct: 289 QSS-QRGLTARERFQNLDKKASSE--GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFC 345
Query: 390 TGSNDHASKFWTRNRLGDPMRD 411
T D W L ++D
Sbjct: 346 TTGMDGGMSIWDVRSLESALKD 367
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 89.9 bits (221), Expect = 1e-19
Identities = 36/258 (13%), Positives = 73/258 (28%), Gaps = 56/258 (21%)
Query: 193 VKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDF------YRCTEEKVLRGHGADVK 246
+ H I +S S +CS DG ++VWD + H + +
Sbjct: 7 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLH 64
Query: 247 CVDW-------HPYKSLIVSGSKDNQQPVKLWDPKAGQALATL----------HAHKSTV 289
VD L+ + S + + + K +
Sbjct: 65 HVDVLQAIERDAFELCLVATTSFSGD--LLFYRITREDETKKVIFEKLDLLDSDMKKHSF 122
Query: 290 MDLAWNQNGN-----WLVTASRDHLLKVFDI-----------------RNLSSEVQTFRG 327
L W + + LV ++ L V++
Sbjct: 123 WALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMT 182
Query: 328 HKKEASAVAWHPQHEGLFSSGGADGSIM-----FWHVGADKEVGCIPQAHDNIIWTMAWH 382
+ A++V GL ++G +G++ + E + N I ++ +
Sbjct: 183 PSQFATSVDISE--RGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 240
Query: 383 PLGHILATGSNDHASKFW 400
P G +LA + ++
Sbjct: 241 PQGSLLAIAHDSNSFGCI 258
Score = 75.7 bits (184), Expect = 5e-15
Identities = 43/287 (14%), Positives = 89/287 (31%), Gaps = 49/287 (17%)
Query: 144 IFSMTWTPEGRRLAHDCAV------RHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQ 197
+++ W RL V +W + ++ V++
Sbjct: 122 FWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPM 181
Query: 198 GHKESIRGISFSPSDSKFATCSDDGTVRVWD------FYRCTEEKVLRGHGADVKCVDWH 251
+ + S AT ++GTV++ + Y + + + ++ V +
Sbjct: 182 TPSQFATSVDISE-RGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 240
Query: 252 PYKSLIVSGSKDNQQPV-KLWDPK-------------AGQALATLHAHKSTVMDLAWNQN 297
P SL+ N L++ + + QA AH S VM L++N +
Sbjct: 241 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS 300
Query: 298 GNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKE----ASAVAWHPQHEGLFSSGGADGS 353
G L +A D L+ +D++ + T H + +A + L G
Sbjct: 301 GETLCSAGWDGKLRFWDVKT-KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG----- 354
Query: 354 IMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFW 400
+ V + + L L D + +++
Sbjct: 355 --VFDV----------KFLKKGWRSGMGADLNESLCCVCLDRSIRWF 389
Score = 69.1 bits (167), Expect = 7e-13
Identities = 40/338 (11%), Positives = 87/338 (25%), Gaps = 60/338 (17%)
Query: 129 TTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHN--GLWMVTSDHQGYIKYW 186
+ P + H V + + T+ G + ++
Sbjct: 35 YLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFY 94
Query: 187 QSNMNN-----------VKTFQGHKESIRGISFSPSD-----SKFATCSDDGTVRVWDFY 230
+ + + K S + + S+ + GT +W F+
Sbjct: 95 RITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFH 154
Query: 231 RCTEEK------------------VLRGHGADVKCVDWHPYKSLIVSGSKDNQ----QPV 268
+E VD + LI +G + +
Sbjct: 155 PFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RGLIATGFNNGTVQISELS 213
Query: 269 KLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNL---------- 318
L ++ ++ + +++ + ++ G+ L A + +
Sbjct: 214 TLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLS 273
Query: 319 -----SSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHD 373
S H +++++ E S G DG + FW V + + + D
Sbjct: 274 VPTHSSQASLGEFAHSSWVMSLSFNDSGET-LCSAGWDGKLRFWDVKTKERITTLNMHCD 332
Query: 374 NI---IWTMAWHPLGHILATGSNDHASKFWTRNRLGDP 408
+I +A G LA R G
Sbjct: 333 DIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMG 370
Score = 55.6 bits (132), Expect = 1e-08
Identities = 17/168 (10%), Positives = 40/168 (23%), Gaps = 9/168 (5%)
Query: 137 TNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTF 196
+ L + + G + +
Sbjct: 226 SMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGE 285
Query: 197 QGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKC----VDWHP 252
H + +SF+ S + DG +R WD L H D++ +
Sbjct: 286 FAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDE 345
Query: 253 YKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNW 300
+ + + + K G ++ + +++ W
Sbjct: 346 HGDSLAEPGVFD-----VKFLKKGWRSGMGADLNESLCCVCLDRSIRW 388
Score = 43.3 bits (100), Expect = 9e-05
Identities = 11/93 (11%), Positives = 25/93 (26%), Gaps = 15/93 (16%)
Query: 320 SEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTM 379
+ + H + +V+ S DG + W +++ + +
Sbjct: 5 ATANAGKAHDADIFSVSACNSF---TVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKS 61
Query: 380 AWH------------PLGHILATGSNDHASKFW 400
H ++AT S F+
Sbjct: 62 GLHHVDVLQAIERDAFELCLVATTSFSGDLLFY 94
Score = 35.6 bits (80), Expect = 0.023
Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Query: 368 IPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAH 420
+AHD I++++ + S D K W L + + H
Sbjct: 9 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVH 59
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 82.6 bits (202), Expect = 9e-18
Identities = 43/258 (16%), Positives = 86/258 (33%), Gaps = 49/258 (18%)
Query: 191 NNVKTFQGHKESIRGI-SFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVD 249
++++ E+ +G+ D K + D T+++WD +++L GH V C+
Sbjct: 3 HSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQ 62
Query: 250 WHPYKSLIVSGSKDNQQP------------------------------------VKLWDP 273
+ + S + + +WD
Sbjct: 63 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM 122
Query: 274 KAGQAL---ATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKK 330
+ + L H++ V + ++ +AS D +KV++ V+T GHK+
Sbjct: 123 ASPTDITLRRVLVGHRAAVNVVDFDDKYIV--SASGDRTIKVWNTSTCEF-VRTLNGHKR 179
Query: 331 EASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILAT 390
+A + L SG +D +I W + C+ + + +
Sbjct: 180 ---GIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHEELVRCIRFDNKRIVS 233
Query: 391 GSNDHASKFWTRNRLGDP 408
G+ D K W DP
Sbjct: 234 GAYDGKIKVWDLVAALDP 251
Score = 78.7 bits (192), Expect = 2e-16
Identities = 41/262 (15%), Positives = 78/262 (29%), Gaps = 22/262 (8%)
Query: 148 TWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGIS 207
T + H +V + + ++ + +
Sbjct: 44 TLECKRILTGHTGSVLCLQYDE---RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLH 100
Query: 208 FSPSDSKFATCSDDGTVRVWDFYRCTE-EKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQ 266
++ TCS D ++ VWD T+ G IVS S D
Sbjct: 101 LRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRT- 159
Query: 267 PVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFR 326
+K+W+ + + TL+ HK + +V+ S D+ ++++DI R
Sbjct: 160 -IKVWNTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLWDIEC----GACLR 212
Query: 327 GHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIP--------QAHDNIIWT 378
+ V SG DG I W + A + H ++
Sbjct: 213 VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 272
Query: 379 MAWHPLGHILATGSNDHASKFW 400
+ + + + S+D W
Sbjct: 273 LQFD--EFQIVSSSHDDTILIW 292
Score = 78.4 bits (191), Expect = 2e-16
Identities = 53/304 (17%), Positives = 91/304 (29%), Gaps = 43/304 (14%)
Query: 64 DFDGKKLRKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDN 123
+D +K+ T+ ++W D+ L+ + H +
Sbjct: 22 QYDDQKIVSGLRDNTI------------KIW-----DKNTLECKRILTGH-------TGS 57
Query: 124 ATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYI 183
V + T E + N MVT I
Sbjct: 58 VLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSI 117
Query: 184 KYWQSNMNN--VKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGH 241
W D + S D T++VW+ C + L GH
Sbjct: 118 AVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGH 177
Query: 242 GADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWL 301
+ C+ + L+VSGS DN ++LWD + G L L H+ V + +
Sbjct: 178 KRGIACLQYRDR--LVVSGSSDNT--IRLWDIECGACLRVLEGHEELVRC--IRFDNKRI 231
Query: 302 VTASRDHLLKVFDIRNLSSE--------VQTFRGHKKEASAVAWHPQHEGLFSSGGADGS 353
V+ + D +KV+D+ ++T H + + S D +
Sbjct: 232 VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ---IVSSSHDDT 288
Query: 354 IMFW 357
I+ W
Sbjct: 289 ILIW 292
Score = 75.3 bits (183), Expect = 2e-15
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQ-SNMNNVKTFQGHKESIRGISFSPSDSKFA 216
H AV + + + + D IK W S V+T GHK I + +
Sbjct: 137 HRAAVNVVDFDDKYIVSASGD--RTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR--LVV 192
Query: 217 TCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWD---- 272
+ S D T+R+WD +VL GH V+C+ + + IVSG+ D + +K+WD
Sbjct: 193 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSGAYDGK--IKVWDLVAA 248
Query: 273 -----PKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD 314
P L TL H V L ++ +V++S D + ++D
Sbjct: 249 LDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD 293
Score = 55.6 bits (132), Expect = 7e-09
Identities = 22/228 (9%), Positives = 63/228 (27%), Gaps = 2/228 (0%)
Query: 1 MITINPGSNFSMPPPSMSGGGHHHHHHPRGYHGQQFHHRPNFNKNFHTPFRPFHKNPNQI 60
+IT + S + + + HH +F++ + +
Sbjct: 68 IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTD 127
Query: 61 MDPDFDGKKLRKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSF 120
+ R + D V + + + + ++ + +
Sbjct: 128 ITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR 187
Query: 121 EDNATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQ 180
+ + + ++ + + + E R R + +++G V
Sbjct: 188 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVA 247
Query: 181 GYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWD 228
+ ++T H + + F + + S D T+ +WD
Sbjct: 248 ALDPRAPAGTLCLRTLVEHSGRVFRLQFDEF--QIVSSSHDDTILIWD 293
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 82.2 bits (201), Expect = 3e-17
Identities = 38/230 (16%), Positives = 70/230 (30%), Gaps = 10/230 (4%)
Query: 190 MNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLR---GHGADVK 246
M V+ Q K+ I I PS S S DG++ V+ F + L + +
Sbjct: 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL 60
Query: 247 CVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASR 306
C ++ L + + +K+ + A + + + + L+ AS
Sbjct: 61 CCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASW 120
Query: 307 DHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSG----GADGSIMFWHVGAD 362
D L++V D RN V + + V SS + + ++ +
Sbjct: 121 DGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLC 180
Query: 363 KEVG---CIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPM 409
++ I A S D + GD
Sbjct: 181 EDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDY 230
Score = 66.0 bits (159), Expect = 5e-12
Identities = 21/270 (7%), Positives = 69/270 (25%), Gaps = 26/270 (9%)
Query: 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNN----VKTFQGHKESIRGISFSPSD 212
A + + + ++ + G + ++ ++ + +K + +F +
Sbjct: 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT 68
Query: 213 SKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWD 272
+ + + + + +++ D
Sbjct: 69 DLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVID 128
Query: 273 PKAGQALATLHAHKSTV------MDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEV--QT 324
P+ + ++ + N + L+ + ++ F + +
Sbjct: 129 PRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIE 188
Query: 325 FRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVG--------------CIPQ 370
G K + VA P+ + ++ DG + +
Sbjct: 189 ESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDT 248
Query: 371 AHDNIIWTMAWHPLGHILATGSNDHASKFW 400
+ ++ + P L T +D W
Sbjct: 249 NLAYPVNSIEFSPRHKFLYTAGSDGIISCW 278
Score = 56.8 bits (135), Expect = 4e-09
Identities = 26/283 (9%), Positives = 61/283 (21%), Gaps = 10/283 (3%)
Query: 10 FSMPPPSMSGGGHHHHHHPRGYHGQQFHHRPNFNKNFHTPFRPFHKNPNQIMDPDFDGKK 69
F G + + N + K + +
Sbjct: 64 FIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGL 123
Query: 70 LRKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAVT 129
+ R D AV N ++ + +
Sbjct: 124 IEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDD 183
Query: 130 TRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSN 189
++ + K + ++ + R V + + + +
Sbjct: 184 NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRC--- 240
Query: 190 MNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVD 249
+ I FSP T DG + W+ + K D V
Sbjct: 241 HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDS-VVK 299
Query: 250 WHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDL 292
+++ + D+ T+ + S++ +
Sbjct: 300 IACSDNILCLATSDD------TFKTNAAIDQTIELNASSIYII 336
Score = 52.9 bits (125), Expect = 7e-08
Identities = 27/337 (8%), Positives = 81/337 (24%), Gaps = 45/337 (13%)
Query: 66 DGKKLRKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNAT 125
L +S ++ V+ + + + + P
Sbjct: 22 SKSLLLITSWDGSL------------TVY--KFDIQAKNVDLLQSLRYKHPLLCCNFIDN 67
Query: 126 NAVTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKY 185
+ ++ + + + + + + S
Sbjct: 68 TDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVI 127
Query: 186 WQSNMNNVKTFQGHKESIRG------ISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLR 239
N + + S + + S+ ++ V+ + C ++
Sbjct: 128 DPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTI 187
Query: 240 GHGAD----VKCVDWHPYKSLIVSGSKDNQQPVKLWDP-------------KAGQALATL 282
+ S D + V+ +D + +
Sbjct: 188 EESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKD 247
Query: 283 HAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHE 342
V + ++ +L TA D ++ ++++ +++ F E S V
Sbjct: 248 TNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT-RKKIKNFAKF-NEDSVVKIACSDN 305
Query: 343 GLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTM 379
L + D + E+ + + I+ +
Sbjct: 306 ILCLATSDDTFKTNAAIDQTIEL------NASSIYII 336
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 81.9 bits (200), Expect = 4e-17
Identities = 39/192 (20%), Positives = 64/192 (33%), Gaps = 5/192 (2%)
Query: 195 TFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYK 254
T +GH S+ D+ T +DD +RV+D L GH V + +
Sbjct: 7 TLRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH-G 64
Query: 255 SLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD 314
++VSGS D V + H +D+ +N ++VT SRD+ L V+
Sbjct: 65 GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 124
Query: 315 IRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDN 374
+ SS H + G S+ + V +DN
Sbjct: 125 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS---YDN 181
Query: 375 IIWTMAWHPLGH 386
+ +
Sbjct: 182 TLIVWDVAQMKC 193
Score = 73.8 bits (179), Expect = 2e-14
Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 6/165 (3%)
Query: 237 VLRGHGADV-KCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWN 295
LRGH V C+ + + +++G+ D ++++D + L L H V L +
Sbjct: 7 TLRGHMTSVITCLQFED--NYVITGADDKM--IRVYDSINKKFLLQLSGHDGGVWALKYA 62
Query: 296 QNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIM 355
+G LV+ S D ++V+DI+ + ++ +G D ++
Sbjct: 63 -HGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 121
Query: 356 FWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFW 400
W + + V + HD + + + AS
Sbjct: 122 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT 166
Score = 65.3 bits (157), Expect = 8e-12
Identities = 13/134 (9%), Positives = 34/134 (25%), Gaps = 2/134 (1%)
Query: 140 MRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGH 199
M I + + S + + F H
Sbjct: 221 MDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYH 280
Query: 200 KESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKV-LRGHGADVKCVDWHPYKSLIV 258
++ I+ + +++ + + V++ K+L+
Sbjct: 281 HTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKG-KTLVA 339
Query: 259 SGSKDNQQPVKLWD 272
+ KD Q +++ D
Sbjct: 340 AVEKDGQSFLEILD 353
Score = 60.3 bits (144), Expect = 3e-10
Identities = 27/236 (11%), Positives = 71/236 (30%), Gaps = 9/236 (3%)
Query: 122 DNATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQG 181
+ + + G H +VR + N + + D+
Sbjct: 124 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTL 183
Query: 182 YIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGH 241
+ + + M + GH + I + + + S D T+R+WD L+GH
Sbjct: 184 IV-WDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGH 242
Query: 242 GADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWL 301
A V + + + + + H + + + + +
Sbjct: 243 TALVGLLRLSDKFLVSAAADGSIRGWDANDYSR------KFSYHHTNLSAITTFYVSDNI 296
Query: 302 VTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFW 357
+ + ++ ++++R+ + +V + + L ++ DG
Sbjct: 297 LVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK--TLVAAVEKDGQSFLE 350
Score = 59.5 bits (142), Expect = 6e-10
Identities = 42/291 (14%), Positives = 83/291 (28%), Gaps = 6/291 (2%)
Query: 149 WTPEGRRL-AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQ-SNMNNVKTFQGHKESIRGI 206
+ P+ L H +V +++T I+ + N + GH + +
Sbjct: 1 FVPQRTTLRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWAL 59
Query: 207 SFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQ 266
++ + S D TVRVWD + V GH + V+C+D YK++ +
Sbjct: 60 KYAH-GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDN 118
Query: 267 PVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFR 326
+ +W ++ + + + V R H+ V +
Sbjct: 119 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG--HGNIVVS 176
Query: 327 GHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGH 386
G V Q + L+ G I +++ I +
Sbjct: 177 GSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM 236
Query: 387 ILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAV 437
G ++ + +G N SA+
Sbjct: 237 YTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAI 287
Score = 58.4 bits (139), Expect = 1e-09
Identities = 18/212 (8%), Positives = 44/212 (20%), Gaps = 5/212 (2%)
Query: 22 HHHHHHPRGYHGQQFHHRPNFNKNFHTPFRPFHKNPNQIMDPDFDGKKLRKSSMRKTVDY 81
H + G H + + + + + + D
Sbjct: 144 FHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDR 203
Query: 82 NAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAVTTRFVKAATNKMR 141
+ I E + D D+ M + +
Sbjct: 204 IYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADG 263
Query: 142 CPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNV--KTFQGH 199
+ H + + + ++ S + + +
Sbjct: 264 SIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKD 323
Query: 200 KESIRGISFSPSDSKFATCSDDGTV--RVWDF 229
+ I ++F + A DG + DF
Sbjct: 324 ADQIWSVNFKG-KTLVAAVEKDGQSFLEILDF 354
Score = 54.9 bits (130), Expect = 2e-08
Identities = 43/283 (15%), Positives = 88/283 (31%), Gaps = 31/283 (10%)
Query: 140 MRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGH 199
I T +V N ++VT + W+ + G
Sbjct: 77 RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGE 136
Query: 200 KESIRGISFSPSDSKF----------------------ATCSDDGTVRVWDFYRCTEEKV 237
+ + +P ++ + + S D T+ VWD + +
Sbjct: 137 EHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYI 196
Query: 238 LRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQN 297
L GH + + + +S S D +++WD + G+ + TL H + V L +
Sbjct: 197 LSGHTDRIYSTIYDHERKRCISASMDTT--IRIWDLENGELMYTLQGHTALVGLLRLSDK 254
Query: 298 GNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFW 357
A + + + F H SA+ + + SG + +
Sbjct: 255 FLVSAAADGSIRGWDANDYS-----RKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIY 308
Query: 358 HVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFW 400
++ + K V + IW++ + ++A D S
Sbjct: 309 NLRSGKLVHANILKDADQIWSVNFKG-KTLVAAVEKDGQSFLE 350
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 81.0 bits (198), Expect = 5e-17
Identities = 30/222 (13%), Positives = 66/222 (29%), Gaps = 4/222 (1%)
Query: 94 WQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAVTTRFVKAATNKMRCPIFSMTWTPEG 153
A + P+ A + + ++ T
Sbjct: 118 ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 177
Query: 154 RRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDS 213
+ H + S++G + T ++ W I + + P+
Sbjct: 178 QFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGE 237
Query: 214 KFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDP 273
A + V V + + ++ H + V + + VS KDN + W
Sbjct: 238 WLAVGMESSNVEVLHVNKPDKYQL-HLHESCVLSLKFAYCGKWFVSTGKDNL--LNAWRT 294
Query: 274 KAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDI 315
G ++ S+V+ + + ++VT S D V+++
Sbjct: 295 PYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
Score = 72.5 bits (176), Expect = 3e-14
Identities = 39/292 (13%), Positives = 75/292 (25%), Gaps = 49/292 (16%)
Query: 154 RRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKT------FQGHKESIRGIS 207
L H V + S+ + T +G +K W + K+ IR
Sbjct: 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCK 104
Query: 208 FSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQP 267
P + T+ +WD T + C V S +
Sbjct: 105 LLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN 164
Query: 268 VKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQ---- 323
+ +WD + H + + +G L T D+ ++ +D+R Q
Sbjct: 165 IAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT 224
Query: 324 -----------------------------------TFRGHKKEASAVAWHPQHEGLFSSG 348
H+ ++ + + F S
Sbjct: 225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGK-WFVST 283
Query: 349 GADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFW 400
G D + W + + + + + TGS D + +
Sbjct: 284 GKDNLLNAWRTPYGASIFQS--KESSSVLSCDISVDDKYIVTGSGDKKATVY 333
Score = 69.5 bits (168), Expect = 3e-13
Identities = 41/268 (15%), Positives = 81/268 (30%), Gaps = 7/268 (2%)
Query: 92 RVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAVTTRFVKAATNKMRCPIFSMTWTP 151
+VW + ++ + S + +A+T +
Sbjct: 75 KVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIK 134
Query: 152 EGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPS 211
+ + + + + N V+ FQGH + I S
Sbjct: 135 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISND 194
Query: 212 DSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLW 271
+K T D TVR WD + + + + + + P + G + + V
Sbjct: 195 GTKLWTGGLDNTVRSWDLREGRQLQQ-HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHV 253
Query: 272 DPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKE 331
+ LH H+S V+ L + G W V+ +D+LL + +S Q+
Sbjct: 254 NKPDKY---QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS--KESSS 308
Query: 332 ASAVAWHPQHEGLFSSGGADGSIMFWHV 359
+ + +G D + V
Sbjct: 309 VLSCDISV-DDKYIVTGSGDKKATVYEV 335
Score = 68.3 bits (165), Expect = 8e-13
Identities = 17/209 (8%), Positives = 47/209 (22%), Gaps = 2/209 (0%)
Query: 22 HHHHHHPRGYHGQQFHHRPNFNKNFHTPFRPFHKNPNQIMDPDFDGKKLRKSSMRKTVDY 81
F + + + + D
Sbjct: 126 LAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG 185
Query: 82 NAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAVTT--RFVKAATNK 139
+ + + + D D+ + + ++
Sbjct: 186 ASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMES 245
Query: 140 MRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGH 199
+ + + + H+ V + +++ G W V++ + W++
Sbjct: 246 SNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE 305
Query: 200 KESIRGISFSPSDSKFATCSDDGTVRVWD 228
S+ S D T S D V++
Sbjct: 306 SSSVLSCDISVDDKYIVTGSGDKKATVYE 334
Score = 49.0 bits (115), Expect = 1e-06
Identities = 19/172 (11%), Positives = 40/172 (23%), Gaps = 7/172 (4%)
Query: 268 VKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSE----VQ 323
+ P+ + + TL+ H V + + + T +KV+DI + ++
Sbjct: 34 IGPGIPRHARQINTLN-HGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQL 91
Query: 324 TFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHP 383
+ P GG ++ W + A
Sbjct: 92 DCLNRDNYIRSCKLLPDGC-TLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAIS 150
Query: 384 LGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDS 435
+ + +R A CI +
Sbjct: 151 PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGG 202
Score = 45.2 bits (105), Expect = 2e-05
Identities = 20/134 (14%), Positives = 34/134 (25%), Gaps = 7/134 (5%)
Query: 292 LAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGAD 351
+G L I + ++ T H + AV +++ G
Sbjct: 15 FHVTADGQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYT--GGK 71
Query: 352 GSIMFWHVGADKEVGCIPQ----AHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGD 407
G + W + + Q DN I + P G L G W
Sbjct: 72 GCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP 131
Query: 408 PMRDRYNQKGLAHC 421
++ A
Sbjct: 132 RIKAELTSSAPACY 145
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 73.9 bits (179), Expect = 8e-15
Identities = 34/230 (14%), Positives = 64/230 (27%), Gaps = 7/230 (3%)
Query: 193 VKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLR-GHGADVKCVDWH 251
+ GH ++I +S S + +G + WD +V H + +
Sbjct: 5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64
Query: 252 PYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLK 311
L D+ + V + A + S + LA + +G+ V A H
Sbjct: 65 SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKH--- 121
Query: 312 VFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQA 371
I S T +S VA + + G ++ GA
Sbjct: 122 ---IAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVH 178
Query: 372 HDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHC 421
I + ++AT + + N + +
Sbjct: 179 PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVA 228
Score = 59.6 bits (142), Expect = 5e-10
Identities = 15/125 (12%), Positives = 35/125 (28%)
Query: 276 GQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAV 335
G + H + L+ + +G L +A + + +DI S H + +
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGI 61
Query: 336 AWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDH 395
+ + S ++ + + +A G I H
Sbjct: 62 KTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKH 121
Query: 396 ASKFW 400
+ +
Sbjct: 122 IAIYS 126
Score = 53.8 bits (127), Expect = 3e-08
Identities = 29/227 (12%), Positives = 57/227 (25%), Gaps = 4/227 (1%)
Query: 91 ARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAVTTRFVKAATNKMRCPIFSMTWT 150
+ D A +A V A +
Sbjct: 73 SWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTE 132
Query: 151 PEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSP 210
+ A+ + + H + + S+ +
Sbjct: 133 VPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGA 192
Query: 211 SDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKL 270
V + + H A V CV W P + +GS DN V +
Sbjct: 193 FLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNS--VIV 250
Query: 271 WDPKAG--QALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDI 315
W+ + AH + ++ N +V+A +D +K +++
Sbjct: 251 WNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
Score = 53.8 bits (127), Expect = 3e-08
Identities = 22/98 (22%), Positives = 34/98 (34%), Gaps = 1/98 (1%)
Query: 318 LSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIW 377
L S Q GH K +A++ + LF S A+G I W + P H +I
Sbjct: 1 LGSIDQVRYGHNKAITALSSSADGKTLF-SADAEGHINSWDISTGISNRVFPDVHATMIT 59
Query: 378 TMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQ 415
+ G + +DH D + N+
Sbjct: 60 GIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANK 97
Score = 53.1 bits (125), Expect = 6e-08
Identities = 39/287 (13%), Positives = 79/287 (27%), Gaps = 46/287 (16%)
Query: 158 HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQ-SNMNNVKTF-QGHKESIRGISFSPSDSKF 215
H+ A+ + S +G + ++D +G+I W S + + F H I GI +
Sbjct: 11 HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG-DL 69
Query: 216 ATCSDDGTVRVWDF----------------------------------------YRCTEE 235
T S D ++V +
Sbjct: 70 FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK 129
Query: 236 KVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWN 295
+ CV K + G +D++ V + + T+ N
Sbjct: 130 LTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSN 189
Query: 296 QNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIM 355
+ T ++ N A ++G D S++
Sbjct: 190 NGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVI 249
Query: 356 FWHVGADKEVGCIPQA--HDNIIWTMAWHPLGHILATGSNDHASKFW 400
W++ + I + + + ++ W + + D KFW
Sbjct: 250 VWNMNKPSDHPIIIKGAHAMSSVNSVIWLN-ETTIVSAGQDSNIKFW 295
Score = 48.1 bits (112), Expect = 2e-06
Identities = 28/222 (12%), Positives = 67/222 (30%), Gaps = 4/222 (1%)
Query: 140 MRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGH 199
++ + + +A+ + + + + + + S+ + +
Sbjct: 78 LKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISY 137
Query: 200 KESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVS 259
S +S V +E K + + L+ +
Sbjct: 138 NSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVAT 197
Query: 260 GSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLS 319
P + + + H + V ++W+ + L T S D+ + V+++ S
Sbjct: 198 DQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPS 257
Query: 320 SEVQTFR--GHKKEASAVAWHPQHEGLFSSGGADGSIMFWHV 359
+ ++V W E S G D +I FW+V
Sbjct: 258 DHPIIIKGAHAMSSVNSVIWLN--ETTIVSAGQDSNIKFWNV 297
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 72.2 bits (175), Expect = 5e-14
Identities = 26/319 (8%), Positives = 65/319 (20%), Gaps = 31/319 (9%)
Query: 56 NPNQIMDPDF--DGKKLRKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPH 113
P +I D K R+ ++ + ++
Sbjct: 41 EPLRIRYVRRGGDTKVAFIHGTREGDFL----------GIYDYRTGKAEKFEENLGNVFA 90
Query: 114 MLPPPSFEDNATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLW 173
M + + + + + + R + +
Sbjct: 91 MGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKH 150
Query: 174 MVTS-DHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWD---- 228
T I + + +F S D
Sbjct: 151 GETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVL 210
Query: 229 ---FYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGS-----KDNQQPVKLWDPKAGQALA 280
F ++ V+ P +G + DP + +
Sbjct: 211 NFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMII 270
Query: 281 TLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQ 340
L + + + A +L +D++ + K + +
Sbjct: 271 PLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT-----RKVTEVKNNLTDLRLSAD 325
Query: 341 HEGLFSSGGADGSIMFWHV 359
+ + DG I + +
Sbjct: 326 RKTVM-VRKDDGKIYTFPL 343
Score = 68.0 bits (164), Expect = 1e-12
Identities = 16/275 (5%), Positives = 55/275 (20%), Gaps = 12/275 (4%)
Query: 22 HHHHHHPRGYHGQQFHHRPNFNKNFHTPFRPFHKNPNQIMDPDFDGKKLRKSSMRKTVDY 81
+ + P I D +
Sbjct: 92 GVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHG 151
Query: 82 NAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPP------SFEDNATNAVTTRFVKA 135
V+ + R A + + + + R V
Sbjct: 152 ETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLN 211
Query: 136 ATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKT 195
+ ++ F + P + I + +
Sbjct: 212 FSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIP 271
Query: 196 FQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKS 255
+ + + + G + +D + + + ++ + +
Sbjct: 272 LESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDV----KTRKVTEVKNNLTDLRLSADRK 327
Query: 256 LIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVM 290
++ D + + + + + T+ K ++
Sbjct: 328 TVMVRKDDGK--IYTFPLEKPEDERTVETDKRPLV 360
Score = 63.0 bits (151), Expect = 5e-11
Identities = 26/221 (11%), Positives = 55/221 (24%), Gaps = 13/221 (5%)
Query: 207 SFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQ 266
FSP D G + D + ++ V +
Sbjct: 9 DFSPLDGDLIAFVSRGQAFIQD--VSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGD 66
Query: 267 PVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFR 326
+ ++D + G+A + V + ++NG + V A+ + D+ V
Sbjct: 67 FLGIYDYRTGKAEKFEE-NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS 125
Query: 327 GHKKEASAV--------AWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWT 378
A+ + + G +I + + K + + +
Sbjct: 126 REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHD--YA 183
Query: 379 MAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLA 419
A+ L S R L +
Sbjct: 184 PAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIP 224
Score = 62.6 bits (150), Expect = 7e-11
Identities = 17/284 (5%), Positives = 47/284 (16%), Gaps = 20/284 (7%)
Query: 129 TTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQS 188
+ + + + + V + +S
Sbjct: 66 DFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS 125
Query: 189 NMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCV 248
+ F S P + V+D +
Sbjct: 126 REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT-TENSHDYAP 184
Query: 249 DWHPYKSLIVSGSKDNQQPVKLWDPKAG-------QALATLHAHKSTVMDLAWNQNGNWL 301
+ + S + D + +
Sbjct: 185 AFDADSKNLYYLSYRSL--DPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTS 242
Query: 302 VTASR---DHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEG--LFSSGGADGSIMF 356
D + I + + + + E + G ++
Sbjct: 243 EAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLK 302
Query: 357 WHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFW 400
+ V K N + + + +D +
Sbjct: 303 YDVKTRK-----VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTF 341
Score = 62.2 bits (149), Expect = 1e-10
Identities = 19/293 (6%), Positives = 54/293 (18%), Gaps = 32/293 (10%)
Query: 55 KNPNQIMDPDFDGKKLRKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHM 114
+ + + D+ K K + V + V D + + + +
Sbjct: 63 REGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVI 122
Query: 115 LPPPSFEDNATNAVTTRFVKAATNKMRCPIFSMTWTPEGRR-----------LAHDCAVR 163
A ++ +
Sbjct: 123 ERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDY 182
Query: 164 HMVWSHNGLWMVTSDHQGYIKYW--------QSNMNNVKTFQGHKESIRGISFSPSDSKF 215
+ + + ++ ++ S P
Sbjct: 183 APAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTS 242
Query: 216 ATCSDDGTVRVWDFYRC-------TEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPV 268
D L + + + +
Sbjct: 243 EAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGV--L 300
Query: 269 KLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSE 321
+D K + + K+ + DL + + ++ D + F + E
Sbjct: 301 LKYDVKTRK----VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDE 349
Score = 61.8 bits (148), Expect = 1e-10
Identities = 24/238 (10%), Positives = 59/238 (24%), Gaps = 9/238 (3%)
Query: 1 MITINPGSNFSMPPPSMSGGGHHHHHHPRGYHGQQFHHRPNFNKNFHTPFRPFHKNPNQI 60
++F++ S H + + +
Sbjct: 124 RSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYA 183
Query: 61 MDPDFDGKKLRKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSF 120
D D K L S R V+ V + + L P ++P
Sbjct: 184 PAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFV--IPLIPGSPNPTKLVPRSMT 241
Query: 121 EDNATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQ 180
+ + + +++ + + M E V + + +
Sbjct: 242 SEAGEYDLNDMYKRSSPINVDPGDYRMIIPLES----SILIYSVPVHGEFAAYYQGAPEK 297
Query: 181 GYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVL 238
G + + V + + + + S DDG + + + +E+ +
Sbjct: 298 GVLLKYDVKTRKVTEVKNN---LTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTV 352
Score = 50.2 bits (118), Expect = 6e-07
Identities = 21/289 (7%), Positives = 47/289 (16%), Gaps = 64/289 (22%)
Query: 174 MVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDG--TVRVWD--- 228
++ +G + V IR + + ++D
Sbjct: 17 LIAFVSRGQAFIQDVSGTYVLKV-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRT 75
Query: 229 --------------------------------------FYRCTEEKVLRGHGADVKCVDW 250
+ R A +
Sbjct: 76 GKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTI 135
Query: 251 HPYKSLIVSGSKDNQQPV--------KLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLV 302
I G ++D + + A + A++ + L
Sbjct: 136 SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSH-DYAPAFDADSKNLY 194
Query: 303 TASRDHLLKVFDIRNL------SSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMF 356
S L D L S+ + P+ + +
Sbjct: 195 YLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYK 254
Query: 357 WHVGADKEVGCIPQA-----HDNIIWTMAWHPLGHILATGSNDHASKFW 400
+ + G I +
Sbjct: 255 RSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKY 303
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 66.1 bits (159), Expect = 3e-12
Identities = 20/243 (8%), Positives = 60/243 (24%), Gaps = 10/243 (4%)
Query: 125 TNAVTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIK 184
+N + + A + + +++G V ++ +
Sbjct: 46 SNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLI 105
Query: 185 YWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGA- 243
+ +K+ + + + + V + +
Sbjct: 106 LQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKP 165
Query: 244 -------DVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQ 296
+ I+ +++ + + +
Sbjct: 166 SYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEI 225
Query: 297 NGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMF 356
+ + T S D + ++ ++ ++ HK + + W S GAD I
Sbjct: 226 EEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET--PSTLVSSGADACIKR 283
Query: 357 WHV 359
W+V
Sbjct: 284 WNV 286
Score = 62.7 bits (150), Expect = 4e-11
Identities = 23/235 (9%), Positives = 62/235 (26%), Gaps = 10/235 (4%)
Query: 193 VKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHP 252
+KT GH + I ++ +P + S DG + W + + H + +D
Sbjct: 6 LKTISGHNKGITALTVNP----LISGSYDGRIMEWSS-----SSMHQDHSNLIVSLDNSK 56
Query: 253 YKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKV 312
+ D + + + G A+ + N + ++ + ++K
Sbjct: 57 AQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKS 116
Query: 313 FDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAH 372
+ + S + + + S + + P
Sbjct: 117 VRLNSPGS-AVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSET 175
Query: 373 DNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYN 427
+ L + L + + + +++ + I
Sbjct: 176 YIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLV 230
Score = 60.7 bits (145), Expect = 1e-10
Identities = 27/284 (9%), Positives = 81/284 (28%), Gaps = 48/284 (16%)
Query: 157 AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFA 216
H+ + + + +++ + G I W ++ Q H I + S + +
Sbjct: 11 GHNKGITALTVNP----LISGSYDGRIMEW----SSSSMHQDHSNLIVSLDNSKAQEYSS 62
Query: 217 TCSDDGTVRVWDFYRCTEEK------------------------------VLRGHGADVK 246
DD + +++ +
Sbjct: 63 ISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSP 122
Query: 247 CVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASR 306
++ + G ++ + ++ ++ + + ++
Sbjct: 123 GSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDV 182
Query: 307 DHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFS---------SGGADGSIMFW 357
+ ++D+++ + + + +A++W P +G +G D +I +
Sbjct: 183 MGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIY 242
Query: 358 HVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWT 401
V ++ AH + + + W L + D K W
Sbjct: 243 SVKRPMKIIKALNAHKDGVNNLLWET-PSTLVSSGADACIKRWN 285
Score = 42.3 bits (97), Expect = 2e-04
Identities = 12/112 (10%), Positives = 31/112 (27%), Gaps = 10/112 (8%)
Query: 276 GQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAV 335
+ L T+ H + L N L++ S D + + + + H ++
Sbjct: 3 DEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSS------MHQDHSNLIVSL 52
Query: 336 AWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHI 387
E S + + A+++ + + +
Sbjct: 53 DNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLL 104
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 65.3 bits (157), Expect = 6e-12
Identities = 37/276 (13%), Positives = 73/276 (26%), Gaps = 30/276 (10%)
Query: 141 RCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGH- 199
R +++ P +A+ C V + S + V F GH
Sbjct: 17 RNFTTHLSYDPTTNAIAYPCGKSAFVRC--------------LDDGDSKVPPVVQFTGHG 62
Query: 200 KESIRGISFSPSDSKF--ATCSDDGTVRVWDF--------YRCTEEKVLRGHGADVKCVD 249
+ + FSP + + G V VW + + + + +
Sbjct: 63 SSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDIS 122
Query: 250 WHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHL 309
W + + +G +L + H + Q+ D
Sbjct: 123 WDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDG 182
Query: 310 LKVF---DIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVG 366
VF S+ +T V + P + G+D I + + + +
Sbjct: 183 SVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLK 242
Query: 367 CIPQAHDNIIWTM--AWHPLGHILATGSNDHASKFW 400
I + + + AT D + W
Sbjct: 243 YIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVW 278
Score = 62.6 bits (150), Expect = 6e-11
Identities = 33/238 (13%), Positives = 66/238 (27%), Gaps = 12/238 (5%)
Query: 133 VKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGL----WMVTSDHQGYIKYWQS 188
V S+ + + + W G D+ G W S
Sbjct: 89 VIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS 148
Query: 189 NMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVR---VWDFYRCTEEKVLRGHGADV 245
+ + + + T DDG+V F ++ G+ V
Sbjct: 149 GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFV 208
Query: 246 KCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDL--AWNQNGNWLVT 303
+ V++ P V +++ + + + T
Sbjct: 209 RDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFAT 268
Query: 304 ASRDHLLKVFDIRNLSSEVQTFRGHKKEAS--AVAWHPQHEGLFSSGGADGSIMFWHV 359
D ++V+D+ S VQ + K++ V G S DG++ F+ +
Sbjct: 269 VGADATIRVWDVTT-SKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 61.1 bits (146), Expect = 2e-10
Identities = 28/258 (10%), Positives = 51/258 (19%), Gaps = 18/258 (6%)
Query: 18 SGGGHHHHHHPRGYHGQQFHHRPNFNKNFHTPFRPFHKNPNQIMDPDFDGKKLRKSSMRK 77
SG ++ + K+ I D +D + R + +
Sbjct: 82 SGDESGKVIVWGWTFDKESNSVEVNVKSEFQVL------AGPISDISWDFEGRRLCVVGE 135
Query: 78 TVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAVTTRFVKAAT 137
D I + S + V
Sbjct: 136 GRDNFGVFI-------SWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQ 188
Query: 138 NKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQ 197
S + D + + ++ Q
Sbjct: 189 GPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQ 248
Query: 198 GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDW---HPYK 254
+ KFAT D T+RVWD + +
Sbjct: 249 EPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGN 308
Query: 255 SLIVSGSKDNQQPVKLWD 272
I+S S D + ++
Sbjct: 309 GRIISLSLDGT--LNFYE 324
Score = 55.3 bits (131), Expect = 1e-08
Identities = 21/157 (13%), Positives = 42/157 (26%), Gaps = 11/157 (7%)
Query: 285 HKSTVMDLAWNQNGNWLVTASRDH-LLKVFDIRNLSSE-VQTFRGHKKEA-SAVAWHPQH 341
++ L+++ N + ++ D + V F GH + V + P
Sbjct: 16 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK 75
Query: 342 EGLF-SSGGADGSIMFWHVGADKEVGCI-------PQAHDNIIWTMAWHPLGHILATGSN 393
+ SG G ++ W DKE + Q I ++W G L
Sbjct: 76 GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGE 135
Query: 394 DHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEM 430
+ + + +
Sbjct: 136 GRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRP 172
Score = 49.9 bits (117), Expect = 7e-07
Identities = 23/187 (12%), Positives = 48/187 (25%), Gaps = 14/187 (7%)
Query: 243 ADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAG--QALATLHAHKS---TVMDLAWNQN 297
+ + P + I + V+ D + H S T + + +
Sbjct: 18 NFTTHLSYDPTTNAIAYPCGKSAF-VRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKG 76
Query: 298 GNWLVTASRDHLLKVFDIRNLSSEVQ-------TFRGHKKEASAVAWHPQ-HEGLFSSGG 349
+L + + V+ F+ S ++W + G
Sbjct: 77 SQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG 136
Query: 350 ADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPM 409
D +F + +G + I T +D + F+
Sbjct: 137 RDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSA 196
Query: 410 RDRYNQK 416
DR + K
Sbjct: 197 SDRTHHK 203
Score = 42.6 bits (98), Expect = 2e-04
Identities = 15/106 (14%), Positives = 30/106 (28%), Gaps = 7/106 (6%)
Query: 323 QTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADK--EVGCIPQAHDNIIWTMA 380
T R + +++ P + G + G K V +++ T+
Sbjct: 14 STQRNF---TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVK 70
Query: 381 WHPL--GHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITG 424
+ P+ L +G W + N K + G
Sbjct: 71 FSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAG 116
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 63.4 bits (152), Expect = 2e-11
Identities = 37/246 (15%), Positives = 79/246 (32%), Gaps = 7/246 (2%)
Query: 162 VRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDD 221
+ + G + + ++ + + + H SPS A+
Sbjct: 20 AVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVH 79
Query: 222 GTVRVW--DFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQAL 279
G VR+W + + VK + W I + + ++ ++ G +
Sbjct: 80 GNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSN 139
Query: 280 ATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHP 339
L + + + + + + + D TF H K +V ++P
Sbjct: 140 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP 199
Query: 340 QHEGLFSSGGADGSIMFW-----HVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSND 394
S+GG +++ G ++ AH ++ + W P G +A+ S D
Sbjct: 200 DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD 259
Query: 395 HASKFW 400
K W
Sbjct: 260 KTIKIW 265
Score = 61.5 bits (147), Expect = 1e-10
Identities = 23/263 (8%), Positives = 54/263 (20%), Gaps = 10/263 (3%)
Query: 54 HKNPNQIMDPDFDGKKLRKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPH 113
H + + G + V + +
Sbjct: 57 HSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKR 116
Query: 114 MLPPPSFEDNATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLW 173
+ + + + N + + R +
Sbjct: 117 IAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEG 176
Query: 174 MVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCT 233
+ ++ + + G + G + + G
Sbjct: 177 PPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVA 236
Query: 234 EEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKS-TVMDL 292
H V + W P + I S S D +K+W+ + T+ L
Sbjct: 237 -------HSGSVFGLTWSPDGTKIASASADKT--IKIWNVATLKVEKTIPVGTRIEDQQL 287
Query: 293 AWNQNGNWLVTASRDHLLKVFDI 315
LV+ S + + +
Sbjct: 288 GIIWTKQALVSISANGFINFVNP 310
Score = 61.1 bits (146), Expect = 2e-10
Identities = 32/245 (13%), Positives = 68/245 (27%), Gaps = 12/245 (4%)
Query: 30 GYHGQQFHHRPNFNKNFHTPFRPFHKNPNQIMDPDFDGKKLRKSSMRKTVDYNAAVINAL 89
HG + P P + + D + K++ + +
Sbjct: 77 DVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH------- 129
Query: 90 EARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAVTTRFVKAATNKMRCPIFSMTW 149
Q M P F + + T + F
Sbjct: 130 VFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHT 189
Query: 150 TPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFS 209
+ +G ++ + G ++ H S+ G+++S
Sbjct: 190 KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG--TKTGVFEDDSLKNVAHSGSVFGLTWS 247
Query: 210 PSDSKFATCSDDGTVRVWDFYRCTEEKVLRGH-GADVKCVDWHPYKSLIVSGSKDNQQPV 268
P +K A+ S D T+++W+ EK + + + + K +VS S + +
Sbjct: 248 PDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGF--I 305
Query: 269 KLWDP 273
+P
Sbjct: 306 NFVNP 310
Score = 59.5 bits (142), Expect = 5e-10
Identities = 23/237 (9%), Positives = 56/237 (23%), Gaps = 1/237 (0%)
Query: 204 RGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKD 263
+ +P+ K C+ +V T+ ++ H P SG
Sbjct: 21 VVLGNTPAGDKIQYCNGT-SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVH 79
Query: 264 NQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQ 323
+ T+ V D++W+ + +
Sbjct: 80 GNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSN 139
Query: 324 TFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHP 383
+ A G+D + + G + H + ++ ++P
Sbjct: 140 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP 199
Query: 384 LGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPG 440
G + A+ D + + V+ + + +
Sbjct: 200 DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA 256
Score = 54.9 bits (130), Expect = 2e-08
Identities = 34/228 (14%), Positives = 67/228 (29%), Gaps = 10/228 (4%)
Query: 138 NKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQ 197
+ T + G++ + + +N
Sbjct: 85 WDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTG 144
Query: 198 GHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLI 257
+ + + SDD TV +++ + H V V ++P SL
Sbjct: 145 QARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLF 204
Query: 258 VSGSKDNQQPVKLWDPKAGQALAT-------LHAHKSTVMDLAWNQNGNWLVTASRDHLL 310
S D L++ G AH +V L W+ +G + +AS D +
Sbjct: 205 ASTGGDGTI--VLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTI 262
Query: 311 KVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWH 358
K++++ +T + + S A+G I F +
Sbjct: 263 KIWNVAT-LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 57.5 bits (137), Expect = 3e-09
Identities = 28/269 (10%), Positives = 64/269 (23%), Gaps = 33/269 (12%)
Query: 122 DNATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQG 181
D T R + + +F +P+G+ LA
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAI------YESPVRLELTHFEVQPT 115
Query: 182 YIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRG- 240
+ + + + + I ++++ SK D V + E+K ++
Sbjct: 116 RVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSW 175
Query: 241 --------------------HGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALA 280
+ + D + G+
Sbjct: 176 EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTG--LLTMDLETGEMAM 233
Query: 281 TLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQ 340
V + N ++L+ FD+ +V
Sbjct: 234 REVRI-MDVFYFSTAVNPAKTRAFGAYNVLESFDLEKN--ASIKRVPLPHSYYSVNVSTD 290
Query: 341 HEGLFSSGGADGSIMFWHVGADKEVGCIP 369
++ GGA G + + ++ G +
Sbjct: 291 GSTVWL-GGALGDLAAYDAETLEKKGQVD 318
Score = 54.0 bits (128), Expect = 3e-08
Identities = 21/217 (9%), Positives = 50/217 (23%), Gaps = 22/217 (10%)
Query: 215 FATCSDDGTVRVWDFYRCTEEKVLR--GHGADVKCVDWHPY-KSLIVSGSKDNQQPVKLW 271
+ + V D + +KV+ G P + + +K +
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSES--LVKI 61
Query: 272 DPKAGQALATLHAHKSTVM-----DLAWNQNGNWLVTASRDHLLKVFDIRNLSS------ 320
D G+ L + A + +G L L++ +
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121
Query: 321 ----EVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFW--HVGADKEVGCIPQAHDN 374
+ ++ + +AW L+ G + + DK +
Sbjct: 122 AETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYA 181
Query: 375 IIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRD 411
+A + + +
Sbjct: 182 QPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYR 218
Score = 48.6 bits (114), Expect = 2e-06
Identities = 20/243 (8%), Positives = 46/243 (18%), Gaps = 2/243 (0%)
Query: 10 FSMPPPSMSGGGHHHHHHPRGYHGQQFHHRPNFNKNFHTPFRPFHKNPNQIMDPDFDGKK 69
S +++ + Q + ++ DG K
Sbjct: 89 LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSK 148
Query: 70 LRKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDN-ATNAV 128
L V A + + + ++ H
Sbjct: 149 LYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKD 208
Query: 129 TTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQS 188
A + T R + + N ++ +
Sbjct: 209 IDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFS-TAVNPAKTRAFGAYNVLESFDL 267
Query: 189 NMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCV 248
N S ++ S S G + +D ++ + G +
Sbjct: 268 EKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSL 327
Query: 249 DWH 251
Sbjct: 328 ASV 330
Score = 45.6 bits (106), Expect = 2e-05
Identities = 15/155 (9%), Positives = 42/155 (27%), Gaps = 7/155 (4%)
Query: 299 NWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEAS--AVAWHPQHEGLFSSGGADGSIMF 356
++++ +R L V D + + + + P +++ S++
Sbjct: 2 DYILAPARPDKLVVIDTEKM-AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 357 WHVGADKEVGCIPQAHDNI----IWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDR 412
+ + +G I + ++ A P G LA + + +
Sbjct: 61 IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120
Query: 413 YNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDED 447
+ + L + + D
Sbjct: 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRD 155
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 57.9 bits (139), Expect = 3e-09
Identities = 32/267 (11%), Positives = 64/267 (23%), Gaps = 32/267 (11%)
Query: 163 RHMVWSHNG--LWMVTSDHQGYIKYWQSNMNNV-KTFQGHKESIRGISFSPSDSKFATCS 219
+ + L+ VT G I + + ++ S S
Sbjct: 22 TQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIG 80
Query: 220 DDGTVRVWDFYRCTEEKVLR-----GHGADVKCVDWHPY-KSLIVSGSKDNQQPVKLWDP 273
DG V + D + V + K I Q + D
Sbjct: 81 RDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQ--YVIMDG 138
Query: 274 KAGQALATLHAHKSTVMDLAWNQNGN------------WLVTASRDHLLKVFDIRNLSSE 321
+ + T + ++ ++V + + D +L++
Sbjct: 139 ETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNL 198
Query: 322 VQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAW 381
T ++ H ++ A ++ K V I T
Sbjct: 199 KTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVA--------IEDTGGQ 250
Query: 382 HPLGHILATGSNDHASKFWTRNRLGDP 408
P A + W + +GD
Sbjct: 251 TPHPGRGANFVHPTFGPVWATSHMGDD 277
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 55.1 bits (131), Expect = 2e-08
Identities = 18/186 (9%), Positives = 42/186 (22%), Gaps = 11/186 (5%)
Query: 205 GISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLR-GHGADVKCVDWHPY-KSLIVSGSK 262
G + + + V D T K P ++ V +
Sbjct: 1 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 60
Query: 263 DNQQPVKLWDPKAGQALATLH------AHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIR 316
+ D + + ++ A + +G +
Sbjct: 61 YGD--IYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYV 118
Query: 317 NLSSEVQTFRGH-KKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNI 375
++ F EA V P ++ AD ++ ++ +
Sbjct: 119 VKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVA 178
Query: 376 IWTMAW 381
+ W
Sbjct: 179 LPLRNW 184
Score = 54.4 bits (129), Expect = 3e-08
Identities = 28/291 (9%), Positives = 67/291 (23%), Gaps = 18/291 (6%)
Query: 83 AAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAVTTRFVKAATNKMRC 142
A V+N ++ D + + S A + R
Sbjct: 54 AYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRL 113
Query: 143 PIFSMTWTPEGRRLAHDC----AVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQG 198
+ P + ++++ + G + ++ + G
Sbjct: 114 NDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTG 173
Query: 199 HKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIV 258
+ A + W E + + K
Sbjct: 174 KYTVALPLRNWNRKGYSAPD----VLYFWPHQSPRHEFSMLYT-----IARFKDDKQDPA 224
Query: 259 SGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNL 318
+ D K G+ A + + + + L +D++
Sbjct: 225 TADLLYG--YLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQR 282
Query: 319 SSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIP 369
H VA+ + + L+ GG + ++ ++V I
Sbjct: 283 KLIKAANLDHT--YYCVAFDKKGDKLY-LGGTFNDLAVFNPDTLEKVKNIK 330
Score = 48.6 bits (114), Expect = 2e-06
Identities = 9/121 (7%), Positives = 25/121 (20%)
Query: 125 TNAVTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIK 184
A + T + A + +
Sbjct: 216 FKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLA 275
Query: 185 YWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGAD 244
+ + + ++F K + V++ + K ++ G D
Sbjct: 276 KYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGD 335
Query: 245 V 245
+
Sbjct: 336 M 336
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 52.3 bits (124), Expect = 1e-07
Identities = 20/229 (8%), Positives = 44/229 (19%), Gaps = 24/229 (10%)
Query: 193 VKTFQGHKESIRGISFSPSDSKFATC----------SDDGTVRVWDFYRCTEEKVLRGHG 242
+ G G + +P + V + D +
Sbjct: 11 LGQIDGGFGP--GFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAGEIVIPA 68
Query: 243 ADVKCVDWHPY----KSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNG 298
+ V + + A + T + G
Sbjct: 69 KHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKM--LSEIDTAACVLAYPAG 126
Query: 299 NWL-VTASRDHL-LKVFDIRN--LSSEVQTFRGHKKEASAVAWHP-QHEGLFSSGGADGS 353
+ L V N + + + + +++G + G+
Sbjct: 127 DDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGN 186
Query: 354 IMFWHVGADKEVGCIP-QAHDNIIWTMAWHPLGHILATGSNDHASKFWT 401
+ DK P + W P G +
Sbjct: 187 VRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVL 235
Score = 43.4 bits (101), Expect = 7e-05
Identities = 19/168 (11%), Positives = 48/168 (28%), Gaps = 28/168 (16%)
Query: 173 WMVTSDHQGYIKYWQSNMNNV---KTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDF 229
+ + + G ++ + + K + ++ R + P +
Sbjct: 177 DYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLM 236
Query: 230 YRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTV 289
++ T+ G D P + V K Q A Q + L +
Sbjct: 237 HKGTD-----GSHKD-------PGTQVWVYDLKSKQ--RVARWDLAQQKVEPLVS----- 277
Query: 290 MDLAWNQNGN--WLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAV 335
+ +++ + + L+ V D R + + +S +
Sbjct: 278 --IQVSEDDKPLFYGLTATSDLV-VMDARTG-ALQHVEKQIGNTSSLL 321
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 50.2 bits (118), Expect = 7e-07
Identities = 19/239 (7%), Positives = 48/239 (20%), Gaps = 11/239 (4%)
Query: 17 MSGGGHHHHHHPRGYHGQQFHHRPNFNKNFHTPFRPFHKNPNQIMDPDFDGKKLRKSSMR 76
+ F P+ DG + +
Sbjct: 123 YQFSPAPAVGVVDLEGKAFKRMLDV-----PDCYHIFPTAPDTFFMHCRDGSLAKVAFGT 177
Query: 77 KTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAVTTRFVKAA 136
+ + + + A ++ +F+ A
Sbjct: 178 ---EGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAV 234
Query: 137 TNKMRCPIFSMTWTPEGRRLA-HDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKT 195
+++A H R + ++ +
Sbjct: 235 EALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLA 294
Query: 196 FQGHKESIRGISFSPSDSK--FATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHP 252
I I+ S + +A + D T+ + D E + + G + +
Sbjct: 295 KFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 353
Score = 39.8 bits (91), Expect = 0.001
Identities = 22/229 (9%), Positives = 43/229 (18%), Gaps = 23/229 (10%)
Query: 193 VKTFQGHKESIRGISFSPSDSKFATCS----------DDGTVRVWDFYRCTEEKVLRGH- 241
+ G + S A S V V+D +
Sbjct: 41 IGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPD 98
Query: 242 ------GADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWN 295
G P ++ V + D + L +
Sbjct: 99 APRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHI-FPTA 157
Query: 296 QNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHE--GLFSSGGADGS 353
+ ++ F T H ++ + + G G
Sbjct: 158 PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGK 217
Query: 354 IMFWHVGADK-EVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWT 401
I + + + +A W P G +
Sbjct: 218 IHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLL 266
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 49.2 bits (116), Expect = 1e-06
Identities = 18/221 (8%), Positives = 41/221 (18%), Gaps = 22/221 (9%)
Query: 209 SPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPY--------KSLIVSG 260
S S ++ A V V+D + A V + L+
Sbjct: 83 STSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFL 142
Query: 261 SKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD-----I 315
+ + + S L D
Sbjct: 143 FGSSA--AAGLSVPGASDDQLTKSASCFHIHPGAA---ATHYLGSCPASLAASDLAAAPA 197
Query: 316 RNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADK-EVGCIPQAHDN 374
Q + A + +++ SI+ + A + +++
Sbjct: 198 AAGIVGAQCTGAQNCSSQAAQANYPGMLVWA---VASSILQGDIPAAGATMKAAIDGNES 254
Query: 375 IIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQ 415
+ G + +
Sbjct: 255 GRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAEN 295
Score = 35.0 bits (79), Expect = 0.041
Identities = 5/86 (5%), Positives = 22/86 (25%), Gaps = 3/86 (3%)
Query: 146 SMTWTPEGRRL-AHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIR 204
+ + G ++ A ++ +++ +
Sbjct: 258 ADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSD 317
Query: 205 GISFSPSDSK--FATCSDDGTVRVWD 228
I + + +A + + ++D
Sbjct: 318 AIIAAQDGASDNYANSAGTEVLDIYD 343
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 44.9 bits (104), Expect = 2e-05
Identities = 16/214 (7%), Positives = 36/214 (16%), Gaps = 2/214 (0%)
Query: 16 SMSGGGHHHHHHPRGYHGQQFHHRPNFNKNFHTPFRPFHKNPNQIMDPDFDGKKLRKSSM 75
+ + + K KS +
Sbjct: 60 DTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPL 119
Query: 76 RKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAVTTRFVKA 135
+ + + + P V +
Sbjct: 120 GLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDS 179
Query: 136 ATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKT 195
+ + + + A + + + V
Sbjct: 180 MSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITAR 239
Query: 196 FQGHKESIRGISFSPSDSK-FATCSDDGTVRVWD 228
+ GI+ +P K + S TV V D
Sbjct: 240 IPVGPD-PAGIAVTPDGKKVYVALSFCNTVSVID 272
Score = 39.5 bits (90), Expect = 0.001
Identities = 18/222 (8%), Positives = 50/222 (22%), Gaps = 1/222 (0%)
Query: 148 TWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGIS 207
T A V VT+ + + N V +S G++
Sbjct: 63 TNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLA 122
Query: 208 FSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQP 267
SP K ++ G K + P + + + D+
Sbjct: 123 LSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSI 182
Query: 268 VKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRG 327
+ + + + ++ + +
Sbjct: 183 SVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV 242
Query: 328 HKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIP 369
+ + +A P + ++ + ++ + +
Sbjct: 243 GP-DPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283
Score = 38.3 bits (87), Expect = 0.003
Identities = 25/202 (12%), Positives = 50/202 (24%), Gaps = 6/202 (2%)
Query: 215 FATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHP-YKSLIVSGSKDNQQPVKLWDP 273
+ S+ + V D + + P + V+ + N V + D
Sbjct: 5 YIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSND--VSIIDT 61
Query: 274 KAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEAS 333
+AT+ A S VT + I S+ V K
Sbjct: 62 ATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASS--TLSVIDTTSNTVAGTVKTGKSPL 119
Query: 334 AVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSN 393
+A P + L+ + D ++ + + + + +A +
Sbjct: 120 GLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDS 179
Query: 394 DHASKFWTRNRLGDPMRDRYNQ 415
S T
Sbjct: 180 MSISVIDTVTNSVIDTVKVEAA 201
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 44.6 bits (104), Expect = 5e-05
Identities = 30/264 (11%), Positives = 58/264 (21%), Gaps = 27/264 (10%)
Query: 163 RHMVWSHNG--LWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSD 220
+ + + L+ VT G I + + ++ S S
Sbjct: 22 KKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGR 81
Query: 221 DGTVRVWDFYRCTEEKVLR-----GHGADVKCVDWHPY-KSLIVSGSKDNQQPVKLWDPK 274
D + + D + KV + + I Q + D +
Sbjct: 82 DARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQ--FAIMDGE 139
Query: 275 AGQALATLHAHKSTVMDLAWNQNGN-WLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEAS 333
+ + TV ++ + AS +H F + KE
Sbjct: 140 TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEH--------------PEFIVNVKETG 185
Query: 334 AVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPL--GHILATG 391
V + + + G+ F G N +A + A
Sbjct: 186 KVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALV 245
Query: 392 SNDHASKFWTRNRLGDPMRDRYNQ 415
P
Sbjct: 246 DVGKTPHPGRGANFVHPKYGPVWS 269
Score = 35.7 bits (81), Expect = 0.021
Identities = 28/211 (13%), Positives = 54/211 (25%), Gaps = 27/211 (12%)
Query: 129 TTRFVKAATNKMRCPIFSMTWTPEGRR--LAHDCAVRHMVWSHNGLWMVTSDHQGYIKYW 186
+ + + W R A + + + V + G +
Sbjct: 194 DIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHP 253
Query: 187 QSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVK 246
N + S S +D + + + L+G G
Sbjct: 254 GRGAN---FVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAW---KKVAELQGQGGGSL 307
Query: 247 CVDWHPYKSLIV-----SGSKDNQQPVKLWDPKAGQALAT---------LHAHKSTVMDL 292
+ HP S + + Q V ++D K A L V+
Sbjct: 308 FIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQP 367
Query: 293 AWNQNGNWLV-----TASRDHLLKVFDIRNL 318
+N+ G+ + + L V D + L
Sbjct: 368 EYNKRGDEVWFSVWNGKNDSSALVVVDDKTL 398
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 44.1 bits (102), Expect = 5e-05
Identities = 19/218 (8%), Positives = 47/218 (21%), Gaps = 5/218 (2%)
Query: 16 SMSGGGHHHHHHPRGYHGQQFHHRPNFNKNFHTPFRPFHKNPNQIMDPDFDGKKLRKSSM 75
S G + + + +
Sbjct: 89 STDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK 148
Query: 76 RKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAVTTRFVKA 135
+ + + + P M + ++ N N+ +
Sbjct: 149 QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPN-EQYAYCVNELNSSVDVWELK 207
Query: 136 ATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKT 195
+ + ++ PE A H+ L+ + S +V +
Sbjct: 208 DPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLS 267
Query: 196 FQGHK---ESIRGISFSPSDSK-FATCSDDGTVRVWDF 229
+G + RG + S A + V++
Sbjct: 268 KEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEI 305
Score = 39.8 bits (91), Expect = 0.001
Identities = 18/181 (9%), Positives = 48/181 (26%), Gaps = 13/181 (7%)
Query: 215 FATCSDDGTVRVWDFYRCTEEKVLR--GHGADVKCVDWHP-YKSLIVSGSKDNQQPVKLW 271
+ + + VW+ + + V+ + P + L V + + V +
Sbjct: 7 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFR--VLAY 64
Query: 272 DPKAGQALATLHAHK---STVMDLAWNQNGNWLVTASRDH--LLKVFDIRNLSSEVQTFR 326
T A ++ ++ + G ++ S + + L V
Sbjct: 65 RIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV 124
Query: 327 GHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGH 386
+ P + L+ + + G + + T+ H
Sbjct: 125 EGLDGCHSANISPDNRTLWVP---ALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRH 181
Query: 387 I 387
+
Sbjct: 182 M 182
Score = 34.4 bits (77), Expect = 0.047
Identities = 15/123 (12%), Positives = 40/123 (32%), Gaps = 3/123 (2%)
Query: 302 VTASRDHLLKVFDIRNLSS-EVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVG 360
+ + + V+++ + + + + + P L+ + ++ + +
Sbjct: 8 IASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIA 67
Query: 361 ADKEVG--CIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGL 418
D A + ++ G + GS + + TR G P+ +GL
Sbjct: 68 PDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL 127
Query: 419 AHC 421
C
Sbjct: 128 DGC 130
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 36.2 bits (82), Expect = 0.011
Identities = 30/219 (13%), Positives = 68/219 (31%), Gaps = 8/219 (3%)
Query: 106 PDVMYYPHMLPPPSFEDNATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHM 165
+ L P+ N+ + + R +
Sbjct: 60 GECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGV 119
Query: 166 VWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVR 225
+ G +V + + N N + F K +D + SD+
Sbjct: 120 TVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHC 179
Query: 226 VWDFY---RCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATL 282
V F + + G V + ++++ + +N + ++ GQ ++ L
Sbjct: 180 VKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN-LTIFTQD-GQLISAL 237
Query: 283 --HAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLS 319
+ D+A +G+ +V AS+D+ L ++ L+
Sbjct: 238 ESKVKHAQCFDVALMDDGS-VVLASKDYRLYIYRYVQLA 275
Score = 27.3 bits (59), Expect = 8.9
Identities = 22/212 (10%), Positives = 59/212 (27%), Gaps = 5/212 (2%)
Query: 197 QGHKESIRGISFSPSDSKFATCSDDGTVRVWD----FYRCTEEKVLRGHGADVKCVDWHP 252
+G G++ + + +++ ++++D F E R
Sbjct: 19 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVV 78
Query: 253 YKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKV 312
S + ++ + + GQ + A N ++ + +
Sbjct: 79 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVI 138
Query: 313 FDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAH 372
+N + + E + +F S + ++ +
Sbjct: 139 IFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGI 198
Query: 373 DNIIWTMAWHPLGHIL-ATGSNDHASKFWTRN 403
N + + G IL A N+ +T++
Sbjct: 199 TNYPIGVGINSNGEILIADNHNNFNLTIFTQD 230
>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga
maritima [TaxId: 2336]}
Length = 375
Score = 33.5 bits (75), Expect = 0.10
Identities = 15/215 (6%), Positives = 46/215 (21%), Gaps = 6/215 (2%)
Query: 1 MITINPGSNFSMPPPSMSGGGHHHHHHPRGYHGQQFHHRPNFNKNFHTPFRPFHKNPNQI 60
M ++PG + P + + NF + +
Sbjct: 106 MALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAV 165
Query: 61 MDPDFDGKKLRKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSF 120
+ + + + ++ ++ + R + + + +L
Sbjct: 166 LINSPNN----PTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEG 221
Query: 121 EDNATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQ 180
D + T R + + + + +
Sbjct: 222 FDRIVYINGFSKSHSMTG-WRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEV 280
Query: 181 GYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKF 215
Q+ + + G+ F + F
Sbjct: 281 DNSYMVQTFKERKNFVVERLKKM-GVKFVEPEGAF 314
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein
6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 465
Score = 33.4 bits (75), Expect = 0.12
Identities = 31/227 (13%), Positives = 64/227 (28%), Gaps = 22/227 (9%)
Query: 194 KTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHG---ADVKCVDW 250
+ F+ H + IS D++F GTVR+W+ T ++ G +
Sbjct: 13 EDFKIHDPEAKWIS----DTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEI 68
Query: 251 HPYKSLIVSGSKDNQQP-------VKLWDPKAG--QALATLHAHKSTVMDLAWNQNGNWL 301
P + + L G Q+L + + W G L
Sbjct: 69 SPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQL 128
Query: 302 VTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGA-----DGSIMF 356
+ +++ + + V + + ++ E + + A DG+ +
Sbjct: 129 IFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLA 188
Query: 357 WHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRN 403
+ D V + H GS + +
Sbjct: 189 YAAINDSRVPIMEL-PTYTGSIYPTVKPYHYPKAGSENPSISLHVIG 234
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 31.4 bits (69), Expect = 0.37
Identities = 31/242 (12%), Positives = 65/242 (26%), Gaps = 13/242 (5%)
Query: 143 PIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKES 202
P+ S W+P+G +LA+ + + + + + N + G K +
Sbjct: 40 PLMSPAWSPDGSKLAY-VTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLA 98
Query: 203 IRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSK 262
+ + + ++ W P + S
Sbjct: 99 FA------------LSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 146
Query: 263 DNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEV 322
+P G A + S D + +G ++V S + + ++L++
Sbjct: 147 QAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 206
Query: 323 QTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWH 382
+ P + S + V D A D + AW
Sbjct: 207 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS 266
Query: 383 PL 384
P
Sbjct: 267 PY 268
>d1iloa_ c.47.1.1 (A:) MTH985, a thioredoxin {Archaeon
Methanobacterium thermoautotrophicum [TaxId: 145262]}
Length = 77
Score = 28.8 bits (65), Expect = 0.47
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 11/77 (14%)
Query: 508 MNKIIVYDT---KVLPVAENDMKALNEAAIKVLMEKVPGTKKIADLN----PDAIFVHGK 560
M KI +Y T + +N +A+ E I EK+ +I + P + V G+
Sbjct: 1 MMKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIKEMDQILEAGLTALP-GLAVDGE 59
Query: 561 VI---KVQKGSELAQVI 574
+ +V E+ +++
Sbjct: 60 LKIMGRVASKEEIKKIL 76
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing
enzyme {Neurospora crassa [TaxId: 5141]}
Length = 365
Score = 31.0 bits (69), Expect = 0.72
Identities = 14/93 (15%), Positives = 28/93 (30%), Gaps = 15/93 (16%)
Query: 164 HMVWSHNGLWMVTSDH------QGYIKYWQSNMNNVKTFQGHKESI-------RGISFSP 210
+ +G +M S QGYI ++ Q +S P
Sbjct: 259 VCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCP 318
Query: 211 SDSKF--ATCSDDGTVRVWDFYRCTEEKVLRGH 241
++ T +G + ++ + +V R
Sbjct: 319 WSDEWMAITDDQEGWLEIYRWKDEFLHRVARVR 351
>d1g9la_ a.144.1.1 (A:) poly(A) binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 144
Score = 29.5 bits (66), Expect = 0.97
Identities = 6/52 (11%), Positives = 8/52 (15%), Gaps = 1/52 (1%)
Query: 657 GPNFPGGPGPPMFPPGGPGPNFSGSGPPGMFPPGGPPNFGPNGPMGPPSGPS 708
GP P ++ P P G
Sbjct: 1 GP-LGSAAAATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQE 51
>d1fo5a_ c.47.1.1 (A:) MJ0307, thioredoxin/glutaredoxin-like protein
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 85
Score = 28.0 bits (61), Expect = 1.2
Identities = 6/59 (10%), Positives = 15/59 (25%)
Query: 138 NKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTF 196
+K++ +F+ P + + K + + V T
Sbjct: 2 SKVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTI 60
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue
{Nostoc punctiforme [TaxId: 272131]}
Length = 302
Score = 29.6 bits (65), Expect = 1.4
Identities = 20/199 (10%), Positives = 54/199 (27%), Gaps = 7/199 (3%)
Query: 203 IRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSK 262
+ ++ +P + F T + G + +++ V + + L+ +G
Sbjct: 30 LENLASAPDGTIFVTNHEVGEIVSIT--PDGNQQIHATVEGKVSGLAFTSNGDLVATGWN 87
Query: 263 DNQ-QPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSE 321
+ V L + + + +L S + + D+ S
Sbjct: 88 ADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGS 147
Query: 322 VQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAW 381
+ +++ + P GL G ++ + IP +
Sbjct: 148 IWLEHPMLARSNSESVFPAANGLKRFGNF----LYVSNTEKMLLLRIPVDSTDKPGEPEI 203
Query: 382 HPLGHILATGSNDHASKFW 400
+ + D +
Sbjct: 204 FVEQTNIDDFAFDVEGNLY 222
>d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha
[TaxId: 82367]}
Length = 123
Score = 27.8 bits (61), Expect = 3.0
Identities = 5/51 (9%), Positives = 13/51 (25%), Gaps = 3/51 (5%)
Query: 2 ITINPGSNFSMPPPSMSGGGHHHHHHPRGYHGQQFHHRPNFNKNFHTPFRP 52
+ PG + P + H+ + N+++
Sbjct: 23 VRAEPGDVINFVP---TDKSHNVEAIKEILPEGVESFKSKINESYTLTVTE 70
>d2igva1 b.62.1.1 (A:1-172) Cyclophilin (eukaryotic) {Caenorhabditis
elegans, isoform 3 [TaxId: 6239]}
Length = 172
Score = 28.2 bits (62), Expect = 3.1
Identities = 9/63 (14%), Positives = 21/63 (33%)
Query: 792 NMRDNDDRRGGGGNYNDNSYDNEDGNDWQGGDDNGWGDGGGQNYQNNERYNNDRNNWEEP 851
+ + G ++ + + N G D G+G G E++ ++ +
Sbjct: 41 TGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHT 100
Query: 852 RRG 854
G
Sbjct: 101 GPG 103
>d1v9ja_ d.52.6.1 (A:) BolA-like protein {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 113
Score = 27.1 bits (60), Expect = 3.4
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 7/24 (29%)
Query: 17 MSGGGHHHHHH-------PRGYHG 33
M G HHHHHH PRG G
Sbjct: 1 MKGSSHHHHHHSSGASLVPRGSEG 24
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 260
Score = 27.9 bits (60), Expect = 4.5
Identities = 14/175 (8%), Positives = 41/175 (23%)
Query: 140 MRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGH 199
R + + + + +D + + +T
Sbjct: 77 NRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF 136
Query: 200 KESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVS 259
+ +S +D RV + +V+ ++ V
Sbjct: 137 TGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVY 196
Query: 260 GSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFD 314
++ N V + + +T + +A + + V + +
Sbjct: 197 VTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT 251
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 27.8 bits (60), Expect = 5.1
Identities = 10/169 (5%), Positives = 35/169 (20%), Gaps = 11/169 (6%)
Query: 273 PKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDH-----------LLKVFDIRNLSSE 321
+ + ++ + + + +G + + +I+ ++
Sbjct: 27 DLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYF 86
Query: 322 VQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAW 381
G + + P + S+ + + G + T
Sbjct: 87 SGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHIL 146
Query: 382 HPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEM 430
G + + + G I +
Sbjct: 147 FADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVS 195
>d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima
[TaxId: 2336]}
Length = 443
Score = 28.2 bits (62), Expect = 5.5
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 226 VWDFYRCTEEKVLRGHGADVKCVDWHPYK 254
+W + T V G DV C ++ +K
Sbjct: 32 IWHTFSHTPGNVKNGDTGDVACDHYNRWK 60
>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase
{Pseudomonas cepacia [TaxId: 292]}
Length = 431
Score = 28.1 bits (61), Expect = 5.6
Identities = 21/181 (11%), Positives = 38/181 (20%), Gaps = 7/181 (3%)
Query: 12 MPPPSMSGGGHHHHHHPRGYHGQQFHHRPNFNKNFHTPFRPFHKNPNQIMDPDFDGKKLR 71
P +G + + N P + I PD L+
Sbjct: 172 RPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILS---SGGIIELPDGYMAALK 228
Query: 72 KSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAVTTR 131
+ + + R R + PD++ L A+ T
Sbjct: 229 RKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDIL----TLSKTLGAGLPLAAIVTS 284
Query: 132 FVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMN 191
+F T + A V +V + + M
Sbjct: 285 AAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLME 344
Query: 192 N 192
Sbjct: 345 R 345
>d1h0ha2 c.81.1.1 (A:1-812) Tungsten containing formate
dehydrogenase, large subunit {Desulfovibrio gigas
[TaxId: 879]}
Length = 812
Score = 27.9 bits (61), Expect = 6.5
Identities = 16/99 (16%), Positives = 23/99 (23%), Gaps = 2/99 (2%)
Query: 634 PGGPMFPPGGPPNFPPNFGPGPPGPNFPGGPGPPMFPPGGPGPNFSGSGPPGMFPPGGPP 693
GG + G N + G +PG G P +
Sbjct: 399 AGGGVNALRGEANVQGSTDHGLLMHIYPGYLGTA--RASIPTYEEYTKKFTPVSKDPQSA 456
Query: 694 NFGPNGPMGPPSGPSGPMGPPGGPNGPMGPPGGGPGPNF 732
N+ N P S P G G ++
Sbjct: 457 NWWSNFPKYSASYIKSMWPDADLNEAYGYLPKGEDGKDY 495
>d2a5sa1 c.94.1.1 (A:7-142,A:145-285) N-methyl-D-aspartate receptor
subunit 1 {Rat (Rattus norvegicus), subtype 2A [TaxId:
10116]}
Length = 277
Score = 27.7 bits (60), Expect = 6.8
Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 3/71 (4%)
Query: 525 DMKALNEAAIKVLMEKVPGTKKIADLNPDAIFVHGKVIKVQKGSELAQVIMRGQKELTRY 584
D + A + + G K + + G I +QKGS + I L ++
Sbjct: 202 DAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQI---DLALLQF 258
Query: 585 INSGRIPELED 595
+ G + ELE
Sbjct: 259 VGDGEMEELET 269
>d2gycj1 c.12.1.1 (J:4-143) Ribosomal protein L15 (L15p)
{Escherichia coli [TaxId: 562]}
Length = 140
Score = 26.9 bits (59), Expect = 6.8
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 852 RRGRGGGKMRGGKRGRGRGGRGKRG 876
R GRG G G GRG G+ R
Sbjct: 15 RLGRGIGSGLGKTGGRGHKGQKSRS 39
>d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId:
1406]}
Length = 447
Score = 27.9 bits (61), Expect = 6.8
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 226 VWDFYRCTEEKVLRGHGADVKCVDWHPYK 254
+WD + T KV G +V C +H Y+
Sbjct: 33 IWDTFAHTPGKVFNGDNGNVACDSYHRYE 61
>d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp.
alkalophilus [TaxId: 1397]}
Length = 449
Score = 27.8 bits (61), Expect = 6.9
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 226 VWDFYRCTEEKVLRGHGADVKCVDWHPYK 254
+WD + T KV G +V C +H +
Sbjct: 33 IWDTFAHTPGKVKNGDNGNVACDSYHRVE 61
>d2j01p1 c.12.1.1 (P:5-150) Ribosomal protein L15 (L15p) {Thermus
thermophilus [TaxId: 274]}
Length = 146
Score = 26.9 bits (59), Expect = 7.4
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 852 RRGRGGGKMRGGKRGRGRGGRGKRG 876
R GRG G G RG G+ R
Sbjct: 14 RVGRGPGSGHGKTATRGHKGQKSRS 38
>d1vqol1 c.12.1.1 (L:1-150) Ribosomal protein L15 (L15p) {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 150
Score = 26.5 bits (58), Expect = 8.1
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 852 RRGRGGGKMRGGKRG--RGRGGRGKRGM 877
+R RG GG RG G RG RG
Sbjct: 5 KRQRGSRTHGGGSHKNRRGAGHRGGRGD 32
>d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId:
1931]}
Length = 464
Score = 27.5 bits (60), Expect = 8.1
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 220 DDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYK 254
D T +WD Y T +V G DV +H ++
Sbjct: 26 DGRTPSIWDTYARTPGRVRNGDTGDVATDHYHRWR 60
>d1t62a_ b.122.1.4 (A:) Hypothetical protein EF3133 {Enterococcus
faecalis [TaxId: 1351]}
Length = 166
Score = 26.7 bits (59), Expect = 8.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Query: 18 SGGGHHHHHH 27
GG HHHHHH
Sbjct: 157 EGGSHHHHHH 166
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus
[TaxId: 274]}
Length = 426
Score = 27.1 bits (59), Expect = 9.6
Identities = 5/29 (17%), Positives = 11/29 (37%)
Query: 226 VWDFYRCTEEKVLRGHGADVKCVDWHPYK 254
+WD + + G + C + Y+
Sbjct: 29 IWDAFAQRPGAIRDGSTGEPACDHYRRYE 57
>d1vgwa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol
(CDP-me) synthase (IspD, YgbP) {Neisseria gonorrhoeae
[TaxId: 485]}
Length = 226
Score = 26.9 bits (58), Expect = 9.8
Identities = 19/181 (10%), Positives = 40/181 (22%), Gaps = 9/181 (4%)
Query: 85 VINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAVTTRFVKAATNKMRCPI 144
V+ E + + P V+ K+
Sbjct: 37 VLGIFERHEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETG 96
Query: 145 FSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIR 204
+ + V + + + + V K +
Sbjct: 97 LAAET--------DNILVHDAARCCLPSEALARLIEQAGNAAEGGILAVPVADTLKRAES 148
Query: 205 G-ISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKD 263
G IS + S + +R + L G + V+ + L++ G
Sbjct: 149 GQISATVDRSGLWQAQTPQLFQAGLLHRALAAENLGGITDEASAVEKLGVRPLLIQGDAR 208
Query: 264 N 264
N
Sbjct: 209 N 209
>d1fgja_ a.138.1.3 (A:) Hydroxylamine oxidoreductase, HAO
{Nitrosomonas europaea [TaxId: 915]}
Length = 499
Score = 27.3 bits (59), Expect = 9.8
Identities = 18/158 (11%), Positives = 41/158 (25%), Gaps = 4/158 (2%)
Query: 8 SNFSMPPPSMSGGGHHHHHHPRGYHGQQFHHRPNFNKNFHTPFRPFHKNPNQIMDPDFDG 67
+ MP G H + + RP H
Sbjct: 162 KDIRMPTADTCGTCHLREFA----ERESERDTMVWPNGQWPAGRPSHALDYTANIETTVW 217
Query: 68 KKLRKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNA 127
+ + + + N + + ++ + +P+ H + + T +
Sbjct: 218 ATMPQREVAEGCTMCHTNQNKCDNCHTRHEFSAAESRKPEACATCHSGVDHNNWEAYTMS 277
Query: 128 VTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHM 165
+ + +K + +G + A CA HM
Sbjct: 278 KHGKLAEMNRDKWNWEVRLKDAFSKGGQNAPTCAACHM 315
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.139 0.458
Gapped
Lambda K H
0.267 0.0507 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,808,840
Number of extensions: 205519
Number of successful extensions: 1049
Number of sequences better than 10.0: 1
Number of HSP's gapped: 760
Number of HSP's successfully gapped: 195
Length of query: 877
Length of database: 2,407,596
Length adjustment: 93
Effective length of query: 784
Effective length of database: 1,130,706
Effective search space: 886473504
Effective search space used: 886473504
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.3 bits)