BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13971
(153 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P22769|PSA71_DROME Proteasome subunit alpha type-7-1 OS=Drosophila melanogaster
GN=Pros28.1 PE=1 SV=2
Length = 249
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 61/101 (60%), Gaps = 25/101 (24%)
Query: 3 SSRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKIT 62
SSRYDRA+T+FSPDGHLLQVEYAQEAVRKGSTAV G+R
Sbjct: 2 SSRYDRAVTIFSPDGHLLQVEYAQEAVRKGSTAV---------------GVRGA------ 40
Query: 63 LNNYLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
N +V+ E S V+ L + K+ ML++HVVMAFAG
Sbjct: 41 --NCVVLGVEKKS--VAQLQEDRKVRKICMLDNHVVMAFAG 77
>sp|Q9CWH6|PSA7L_MOUSE Proteasome subunit alpha type-7-like OS=Mus musculus GN=Psma8 PE=2
SV=1
Length = 250
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 58/101 (57%), Gaps = 25/101 (24%)
Query: 3 SSRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKIT 62
+SRYDRAITVFSPDGHL QVEYAQEAV+KGSTAV G+R
Sbjct: 2 ASRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAV---------------GIRG------- 39
Query: 63 LNNYLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
N +V+ E S V+ L + K+ L+DHV MAFAG
Sbjct: 40 -TNIVVLGVEKKS--VAKLQDERTVRKICALDDHVCMAFAG 77
>sp|Q4R7D9|PSA7L_MACFA Proteasome subunit alpha type-7-like OS=Macaca fascicularis
GN=PSMA7L PE=2 SV=1
Length = 250
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 58/101 (57%), Gaps = 25/101 (24%)
Query: 3 SSRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKIT 62
+SRYDRAITVFSPDGHL QVEYAQEAV+KGSTAV G+R
Sbjct: 2 ASRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAV---------------GIR-------- 38
Query: 63 LNNYLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
N +V+ E S V+ L + K+ L+DHV MAFAG
Sbjct: 39 GTNIVVLGVEKKS--VAKLQDERTVRKICALDDHVCMAFAG 77
>sp|Q27575|PSA73_DROME Proteasome subunit alpha type-7-1B OS=Drosophila melanogaster
GN=Pros28.1B PE=2 SV=2
Length = 252
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 58/101 (57%), Gaps = 25/101 (24%)
Query: 3 SSRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKIT 62
+ RYDRA+T++SPDGHLLQVEYAQEAVR+GST + GLR
Sbjct: 2 AQRYDRAVTIYSPDGHLLQVEYAQEAVRRGSTVM---------------GLRT------- 39
Query: 63 LNNYLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
NN +V+ E S V L + K+ ML+DHVVM F+G
Sbjct: 40 -NNAIVIGVEKRS--VGDLQEERMVRKICMLDDHVVMTFSG 77
>sp|Q95005|PSA7_CAEEL Proteasome subunit alpha type-7 OS=Caenorhabditis elegans GN=pas-4
PE=1 SV=1
Length = 253
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 57/101 (56%), Gaps = 27/101 (26%)
Query: 4 SRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITL 63
+RYDRAIT+FSPDGHL QVEYAQEAV+KGSTAV G+R + I I +
Sbjct: 2 NRYDRAITIFSPDGHLFQVEYAQEAVKKGSTAV---------------GVRGKDCIVIGV 46
Query: 64 NNYLVMTKEIISLKVSPLLSQAQN-SKLSMLNDHVVMAFAG 103
K P L + K+ M++DHV++AFAG
Sbjct: 47 EK-----------KSIPALQDDRTIRKIHMIDDHVMLAFAG 76
>sp|Q8TAA3|PSA7L_HUMAN Proteasome subunit alpha type-7-like OS=Homo sapiens GN=PSMA8 PE=1
SV=3
Length = 256
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 57/100 (57%), Gaps = 25/100 (25%)
Query: 3 SSRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKIT 62
+SRYDRAITVFSPDGHL QVEYAQEAV+KGSTAV G+R
Sbjct: 2 ASRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAV---------------GIR-------- 38
Query: 63 LNNYLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFA 102
N +V+ E S V+ L + K+ L+DHV MAFA
Sbjct: 39 GTNIVVLGVEKKS--VAKLQDERTVRKICALDDHVCMAFA 76
>sp|Q24178|PSA72_DROME Proteasome subunit alpha type-7-1A OS=Drosophila melanogaster
GN=Pros28.1A PE=2 SV=2
Length = 249
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 58/101 (57%), Gaps = 25/101 (24%)
Query: 3 SSRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKIT 62
SSRY RA+T+FSPDGHLLQVEYAQEAVRKGSTAV G+R
Sbjct: 2 SSRYGRALTIFSPDGHLLQVEYAQEAVRKGSTAV---------------GVRGA------ 40
Query: 63 LNNYLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
N +V+ E S VS + K+SML+ HV +AFAG
Sbjct: 41 --NCVVLGVEKSS--VSEMQEDRTVRKISMLDRHVALAFAG 77
>sp|Q9PTW9|PSA7_CARAU Proteasome subunit alpha type-7 OS=Carassius auratus GN=psma7 PE=2
SV=1
Length = 251
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 56/101 (55%), Gaps = 25/101 (24%)
Query: 3 SSRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKIT 62
++RYDRAITVFSPDGHL QVEYAQEAV+KGSTAV G+R + + +
Sbjct: 2 AARYDRAITVFSPDGHLFQVEYAQEAVKKGSTAV---------------GIRGKDIVVLG 46
Query: 63 LNNYLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
+ V+ L + K+ L++HV MAFAG
Sbjct: 47 VEKK----------SVAKLQEERTVRKICALDEHVCMAFAG 77
>sp|O16811|PSA71_DROVI Proteasome subunit alpha type-7-1 OS=Drosophila virilis GN=Pros28.1
PE=3 SV=1
Length = 247
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 58/101 (57%), Gaps = 26/101 (25%)
Query: 3 SSRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKIT 62
SSRYDRA+T+FSPDG LLQVEYAQEAVRKGSTAV G+R
Sbjct: 2 SSRYDRAVTIFSPDGRLLQVEYAQEAVRKGSTAV---------------GVRG------- 39
Query: 63 LNNYLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
N +V+ E S V+ L K+ +L DHVVMAFAG
Sbjct: 40 -GNCVVLGVEKKS--VAKLQEDRTVRKICVL-DHVVMAFAG 76
>sp|P34120|PSA7_DICDI Proteasome subunit alpha type-7 OS=Dictyostelium discoideum
GN=psmA7 PE=3 SV=1
Length = 250
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 27/104 (25%)
Query: 1 MSSSRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIK 60
MSS+RYDRAITVFSPDGHL QVEYA EAVRKG+ AV G+R + I
Sbjct: 1 MSSARYDRAITVFSPDGHLFQVEYAMEAVRKGTVAV---------------GVRGKDVIV 45
Query: 61 ITLNNYLVMTKEIISLKVSPLLSQAQN-SKLSMLNDHVVMAFAG 103
+ + K + L A++ K+ L+DH+ + FAG
Sbjct: 46 LGVEK-----------KATAKLQDARSIRKIVKLDDHICLTFAG 78
>sp|O13268|PSA7_CHICK Proteasome subunit alpha type-7 OS=Gallus gallus GN=PSMA7 PE=2 SV=1
Length = 249
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 53/98 (54%), Gaps = 25/98 (25%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITLNN 65
YDRAITVFSPDGHL QVEYAQEAV+KGSTAV G+R + + + +
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAV---------------GVRGKDIVVLGVEK 47
Query: 66 YLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
V+ L + K+ L+D+V MAFAG
Sbjct: 48 K----------SVAKLQDERTVRKICALDDNVCMAFAG 75
>sp|O14818|PSA7_HUMAN Proteasome subunit alpha type-7 OS=Homo sapiens GN=PSMA7 PE=1 SV=1
Length = 248
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 53/98 (54%), Gaps = 25/98 (25%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITLNN 65
YDRAITVFSPDGHL QVEYAQEAV+KGSTAV G+R + + + +
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAV---------------GVRGRDIVVLGVEK 47
Query: 66 YLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
V+ L + K+ L+D+V MAFAG
Sbjct: 48 K----------SVAKLQDERTVRKICALDDNVCMAFAG 75
>sp|Q3ZBG0|PSA7_BOVIN Proteasome subunit alpha type-7 OS=Bos taurus GN=PSMA7 PE=1 SV=1
Length = 248
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 53/98 (54%), Gaps = 25/98 (25%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITLNN 65
YDRAITVFSPDGHL QVEYAQEAV+KGSTAV G+R + + + +
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAV---------------GVRGKDIVVLGVEK 47
Query: 66 YLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
V+ L + K+ L+D+V MAFAG
Sbjct: 48 K----------SVAKLQDERTVRKICALDDNVCMAFAG 75
>sp|Q9Z2U0|PSA7_MOUSE Proteasome subunit alpha type-7 OS=Mus musculus GN=Psma7 PE=1 SV=1
Length = 248
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 53/98 (54%), Gaps = 25/98 (25%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITLNN 65
YDRAITVFSPDGHL QVEYAQEAV+KGSTAV G+R + + + +
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAV---------------GVRGKDIVVLGVEK 47
Query: 66 YLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
V+ L + K+ L+D+V MAFAG
Sbjct: 48 K----------SVAKLQDERTVRKICALDDNVCMAFAG 75
>sp|Q5RDH8|PSA7_PONAB Proteasome subunit alpha type-7 OS=Pongo abelii GN=PSMA7 PE=2 SV=2
Length = 248
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 53/98 (54%), Gaps = 25/98 (25%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITLNN 65
YDRAITVFSPDGHL QVEYAQEA++KGSTAV G+R + + + +
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAIKKGSTAV---------------GVRGRDIVVLGVEK 47
Query: 66 YLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
V+ L + K+ L+D+V MAFAG
Sbjct: 48 K----------SVAKLQDERTVRKICALDDNVCMAFAG 75
>sp|Q9PVY6|PSA7A_XENLA Proteasome subunit alpha type-7-A OS=Xenopus laevis GN=psma7-a PE=2
SV=1
Length = 248
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 52/103 (50%), Gaps = 35/103 (33%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITLNN 65
YDRAITVFSPDGHL QVEYAQEAV+KGSTAV
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVG---------------------------- 34
Query: 66 YLVMTKEIISL-----KVSPLLSQAQNSKLSMLNDHVVMAFAG 103
V KEI+ L V+ L + K+ L+++V MAFAG
Sbjct: 35 --VRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAG 75
>sp|Q9PVQ1|PSA7B_XENLA Proteasome subunit alpha type-7-B OS=Xenopus laevis GN=psma7-b PE=2
SV=1
Length = 247
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 52/103 (50%), Gaps = 35/103 (33%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITLNN 65
YDRAITVFSPDGHL QVEYAQEAV+KGSTAV
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVG---------------------------- 34
Query: 66 YLVMTKEIISL-----KVSPLLSQAQNSKLSMLNDHVVMAFAG 103
V KEI+ L V+ L + K+ L+++V MAFAG
Sbjct: 35 --VRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAG 75
>sp|P48004|PSA7_RAT Proteasome subunit alpha type-7 OS=Rattus norvegicus GN=Psma7 PE=1
SV=1
Length = 254
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 52/97 (53%), Gaps = 25/97 (25%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITLNN 65
YDRAITVFSPDGHL QVEYAQEAV+KGSTAV G+R + + + +
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAV---------------GVRGRDIVVLGVEK 47
Query: 66 YLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFA 102
V+ L + K+ L+D+V MAFA
Sbjct: 48 K----------SVAKLQDERTVRKICALDDNVCMAFA 74
>sp|O24030|PSA7_SOLLC Proteasome subunit alpha type-7 OS=Solanum lycopersicum GN=PAD1
PE=2 SV=1
Length = 259
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 27/101 (26%)
Query: 4 SRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITL 63
+RYDRAITVFSPDGHL QVEYA EAVRKG+ AV G+R T+ +
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYAMEAVRKGNAAV---------------GVRGTDTVVLG- 45
Query: 64 NNYLVMTKEIISLKVSPLLSQAQN-SKLSMLNDHVVMAFAG 103
+ K +P L +++ K+ L+DH+ +A AG
Sbjct: 46 ----------VEKKSTPKLQDSRSVRKIVNLDDHIALACAG 76
>sp|Q10329|PSA4_SCHPO Probable proteasome subunit alpha type-4 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pre6 PE=3 SV=1
Length = 259
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 27/101 (26%)
Query: 4 SRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITL 63
S YDRA++VFSPDG LLQVEY QEAVR+G+TA++ LR I I
Sbjct: 2 SGYDRALSVFSPDGRLLQVEYGQEAVRRGTTAIA---------------LRGNECIVIG- 45
Query: 64 NNYLVMTKEIISLKVSPLLSQAQN-SKLSMLNDHVVMAFAG 103
+ K P L N K++M+++HV +AFAG
Sbjct: 46 ----------VERKNVPKLQNVSNFQKIAMVDNHVCLAFAG 76
>sp|P30186|PSA7A_ARATH Proteasome subunit alpha type-7-A OS=Arabidopsis thaliana GN=PAD1
PE=1 SV=1
Length = 250
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 27/101 (26%)
Query: 4 SRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITL 63
+RYDRAITVFSPDGHL QVEYA EAVRKG+ AV G+R T+ + +
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAV---------------GVRGTDTVVLAV 46
Query: 64 NNYLVMTKEIISLKVSPLLSQAQNS-KLSMLNDHVVMAFAG 103
K +P L ++++ K+ L++H+ +A AG
Sbjct: 47 EK-----------KSTPKLQDSRSARKIVSLDNHIALACAG 76
>sp|O24616|PSA7B_ARATH Proteasome subunit alpha type-7-B OS=Arabidopsis thaliana GN=PAD2
PE=1 SV=2
Length = 250
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 27/101 (26%)
Query: 4 SRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITL 63
+RYDRAITVFSPDGHL QVEYA EAVRKG+ AV G+R T+ + +
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAV---------------GVRGTDTVVLAV 46
Query: 64 NNYLVMTKEIISLKVSPLLSQAQNS-KLSMLNDHVVMAFAG 103
K +P L ++++ K+ L++H+ +A AG
Sbjct: 47 EK-----------KSTPKLQDSRSARKIVSLDNHIALACAG 76
>sp|Q0J006|PSA7B_ORYSJ Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. japonica
GN=PAD1 PE=2 SV=1
Length = 249
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 27/101 (26%)
Query: 4 SRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITL 63
+RYDRAITVFSPDGHL QVEYA EAVRKG+ AV G+R T+ + +
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAV---------------GVRGSDTVVLGV 46
Query: 64 NNYLVMTKEIISLKVSPLLSQAQN-SKLSMLNDHVVMAFAG 103
K +P L +++ K++ L+ H+ +A AG
Sbjct: 47 EK-----------KSTPKLQDSRSVRKIASLDTHIALACAG 76
>sp|A2Z3I9|PSA7B_ORYSI Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. indica
GN=PAD1 PE=2 SV=1
Length = 249
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 27/101 (26%)
Query: 4 SRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITL 63
+RYDRAITVFSPDGHL QVEYA EAVRKG+ AV G+R T+ + +
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAV---------------GVRGSDTVVLGV 46
Query: 64 NNYLVMTKEIISLKVSPLLSQAQN-SKLSMLNDHVVMAFAG 103
K +P L +++ K++ L+ H+ +A AG
Sbjct: 47 EK-----------KSTPKLQDSRSVRKIASLDTHIALACAG 76
>sp|Q6YT00|PSA7A_ORYSJ Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. japonica
GN=Os08g0548900 PE=2 SV=1
Length = 249
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 27/101 (26%)
Query: 4 SRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITL 63
+RYDRAITVFSPDGHL QVEYA EAVRKG+ AV G+R T+ + +
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAV---------------GVRGTDTVVLGV 46
Query: 64 NNYLVMTKEIISLKVSPLLSQAQN-SKLSMLNDHVVMAFAG 103
K +P L +++ K++ L+ H+ +A AG
Sbjct: 47 EK-----------KSTPKLQDSRSMRKIASLDTHIALACAG 76
>sp|A2YXU2|PSA7A_ORYSI Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. indica
GN=OsI_029135 PE=2 SV=2
Length = 249
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 27/101 (26%)
Query: 4 SRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITL 63
+RYDRAITVFSPDGHL QVEYA EAVRKG+ AV G+R T+ + +
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAV---------------GVRGTDTVVLGV 46
Query: 64 NNYLVMTKEIISLKVSPLLSQAQN-SKLSMLNDHVVMAFAG 103
K +P L +++ K++ L+ H+ +A AG
Sbjct: 47 EK-----------KSTPKLQDSRSMRKIASLDTHIALACAG 76
>sp|Q9SXU1|PSA7_CICAR Proteasome subunit alpha type-7 OS=Cicer arietinum GN=PAD1 PE=2
SV=1
Length = 249
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 25/100 (25%)
Query: 4 SRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITL 63
+RYDRAITVFSPDGHL QVEYA EAVRKG+ AV + +V G+ +ST K+
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDNVV-----LGVEKKSTAKL-- 54
Query: 64 NNYLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
++ S++ K+ L+DH+ +A AG
Sbjct: 55 -------QDTRSVR-----------KIVNLDDHIALACAG 76
>sp|P40303|PSA4_YEAST Proteasome subunit alpha type-4 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PRE6 PE=1 SV=1
Length = 254
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 26/101 (25%)
Query: 4 SRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLV-SSFRKTGLRVQSTIKIT 62
S YDRA+++FSPDGH+ QVEYA EAV++G+ AV + + +V R++ L++Q T
Sbjct: 2 SGYDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDT---- 57
Query: 63 LNNYLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
+++P SK+S ++ HVV++F+G
Sbjct: 58 --------------RITP-------SKVSKIDSHVVLSFSG 77
>sp|Q9NDA2|PSA7_TRYBB Proteasome subunit alpha type-7 OS=Trypanosoma brucei brucei
GN=PSA4 PE=2 SV=1
Length = 247
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLR----VQSTIKI 61
YDRAITVFSPDGHL QVEYAQEAVRKG AV + + ++ + K ++ ++T KI
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVRKGLCAVGVKGKDSIIFAVEKKSVQKLQDSRTTRKI 62
Query: 62 -TLNNYLVMTKEIISLKVSPLLSQAQ 86
L+ ++ + +S +++ AQ
Sbjct: 63 YKLDEHIYLASAGLSADARVVVNHAQ 88
>sp|A6URN9|PSA_METVS Proteasome subunit alpha OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1
Length = 259
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 25/101 (24%)
Query: 3 SSRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKIT 62
+S YDRAIT+FSP+G L QVEYA+EAVR+G+TAV G++ + + +
Sbjct: 7 ASGYDRAITIFSPEGRLYQVEYAREAVRRGTTAV---------------GIKCKDGVVLA 51
Query: 63 LNNYLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
++ + S L+ + K+ ++DH+V A +G
Sbjct: 52 VDRRI----------TSKLIDVSSIEKIFQIDDHIVAATSG 82
>sp|A4FZT6|PSA_METM5 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=psmA PE=3 SV=1
Length = 259
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 25/101 (24%)
Query: 3 SSRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKIT 62
+S YDRAIT+FSP+G L QVEYA+EAVR+G+TAV G++ + + +
Sbjct: 7 ASGYDRAITIFSPEGRLYQVEYAREAVRRGTTAV---------------GIKCKDGVVLA 51
Query: 63 LNNYLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
++ + S L+ + K+ ++DH+V A +G
Sbjct: 52 VDRRI----------TSKLIDVSSIEKIFQIDDHIVAATSG 82
>sp|Q6L0W3|PSA_PICTO Proteasome subunit alpha OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=psmA
PE=3 SV=1
Length = 234
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 35/44 (79%), Gaps = 2/44 (4%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTA--VSFQVEVYLVSS 47
YDRAITVFSPDG L QVEYA+EAV+KGSTA + F+ V L+S
Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGIKFKDGVALISE 51
>sp|Q6M0L9|PSA_METMP Proteasome subunit alpha OS=Methanococcus maripaludis (strain S2 /
LL) GN=psmA PE=3 SV=1
Length = 259
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 25/101 (24%)
Query: 3 SSRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKIT 62
+S YDRAIT+FSP+G L QVEYA+EAVR+G+TAV G++ + + +
Sbjct: 7 ASGYDRAITIFSPEGRLYQVEYAREAVRRGTTAV---------------GIKCKDGVVLA 51
Query: 63 LNNYLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
++ + S L+ + K+ ++DH+V A +G
Sbjct: 52 VDRRI----------TSKLIDVSSIEKIFQIDDHIVAATSG 82
>sp|A6VIP0|PSA_METM7 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=psmA PE=3 SV=1
Length = 259
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 25/101 (24%)
Query: 3 SSRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKIT 62
+S YDRAIT+FSP+G L QVEYA+EAVR+G+TAV G++ + + +
Sbjct: 7 ASGYDRAITIFSPEGRLYQVEYAREAVRRGTTAV---------------GIKCKDGVVLA 51
Query: 63 LNNYLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
++ + S L+ + K+ ++DH+V A +G
Sbjct: 52 VDRRI----------TSKLIDVSSIEKIFQIDDHIVAATSG 82
>sp|Q8TYB7|PSA_METKA Proteasome subunit alpha OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=psmA PE=3 SV=1
Length = 246
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 2 SSSRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLV 45
+ + YDRAITVFSPDG L QVEYA+EAV++G+TA+ +VE +V
Sbjct: 6 AQTAYDRAITVFSPDGRLFQVEYAREAVKRGTTALGIKVEEGVV 49
>sp|A9A846|PSA_METM6 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=psmA PE=3 SV=1
Length = 259
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 25/101 (24%)
Query: 3 SSRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKIT 62
+S YDRAIT+FSP+G L QVEYA+EAVR+G+TAV G++ + +
Sbjct: 7 ASGYDRAITIFSPEGRLYQVEYAREAVRRGTTAV---------------GIKCNDGVVLA 51
Query: 63 LNNYLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
++ + S L+ + K+ ++DH+V A +G
Sbjct: 52 VDRRI----------TSKLIDVSSIEKIFQIDDHIVAATSG 82
>sp|Q3IPJ1|PSA_NATPD Proteasome subunit alpha OS=Natronomonas pharaonis (strain DSM 2160
/ ATCC 35678) GN=psmA PE=3 SV=1
Length = 255
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 25/98 (25%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITLNN 65
YDR IT+FSPDG L QVEYA+EAV++G+ ++ + E +V
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGIRTEDGVV-------------------- 49
Query: 66 YLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
LV+ K I SPL+ + K+ +DH+ +A AG
Sbjct: 50 -LVVDKRI----RSPLMERTSVEKIHKADDHIGIASAG 82
>sp|Q97BZ8|PSA_THEVO Proteasome subunit alpha OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=psmA PE=3 SV=2
Length = 233
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQ 39
YDRAITVFSPDG L QVEYA+EAV+KGSTA+ +
Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGLK 41
>sp|P25156|PSA_THEAC Proteasome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=psmA PE=1 SV=2
Length = 233
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQ 39
YDRAITVFSPDG L QVEYA+EAV+KGSTA+ +
Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGMK 41
>sp|P57697|PSA_HALSA Proteasome subunit alpha OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=psmA PE=3 SV=1
Length = 253
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 25/98 (25%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITLNN 65
YDR IT+FSPDG L QVEYA+EAV++G+ ++ G+R +
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASI---------------GVRTPEGV------ 48
Query: 66 YLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
LV+ K+ SPLL + KL ++DHV A AG
Sbjct: 49 VLVVDKQT----RSPLLEGSSVEKLHKIDDHVGAASAG 82
>sp|B0R2T2|PSA_HALS3 Proteasome subunit alpha OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=psmA PE=3 SV=1
Length = 253
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 25/98 (25%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITLNN 65
YDR IT+FSPDG L QVEYA+EAV++G+ ++ G+R +
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASI---------------GVRTPEGV------ 48
Query: 66 YLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
LV+ K+ SPLL + KL ++DHV A AG
Sbjct: 49 VLVVDKQT----RSPLLEGSSVEKLHKIDDHVGAASAG 82
>sp|Q59565|PSA_METTE Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA
PE=3 SV=1
Length = 247
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 30/34 (88%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQ 39
YDRAITVFSPDG L QVEYA+EAV++G+TAV +
Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIK 40
>sp|Q8PTU1|PSA_METMA Proteasome subunit alpha OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=psmA PE=3 SV=1
Length = 249
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 30/34 (88%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQ 39
YDRAITVFSPDG L QVEYA+EAV++G+TAV +
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIK 42
>sp|Q469M6|PSA_METBF Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=psmA PE=3 SV=1
Length = 249
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 30/34 (88%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQ 39
YDRAITVFSPDG L QVEYA+EAV++G+TAV +
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIK 42
>sp|Q8TPX5|PSA_METAC Proteasome subunit alpha OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=psmA PE=3
SV=1
Length = 247
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 30/34 (88%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQ 39
YDRAITVFSPDG L QVEYA+EAV++G+TAV +
Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIK 40
>sp|O29760|PSA_ARCFU Proteasome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=psmA PE=1 SV=1
Length = 246
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%), Gaps = 2/46 (4%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVE--VYLVSSFR 49
YDRAITVFSPDG L QVEYA+EAV++G+TA+ + + V L++ R
Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKR 53
>sp|A5UJS2|PSA_METS3 Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1
Length = 250
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 1 MSSSRYDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRK 50
+ ++ YDRAITVFSPDG L QVEYA+EAV++G+T++ + +V + K
Sbjct: 4 LQNAGYDRAITVFSPDGRLFQVEYAREAVKRGTTSIGIKCSEGIVLAVDK 53
>sp|A7I9C7|PSA_METB6 Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8)
GN=psmA PE=3 SV=1
Length = 240
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 30/34 (88%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQ 39
YDRAITVFSPDG L QVEYA+EAV++G+TAV +
Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIK 42
>sp|B8GEZ3|PSA_METPE Proteasome subunit alpha OS=Methanosphaerula palustris (strain
ATCC BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1
Length = 241
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 30/34 (88%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQ 39
YDRAITVFSPDG L QVEYA+EAV++G+TAV +
Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIK 42
>sp|Q5V1D4|PSA2_HALMA Proteasome subunit alpha 2 OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=psmA2 PE=3
SV=1
Length = 244
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 25/98 (25%)
Query: 6 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAVSFQVEVYLVSSFRKTGLRVQSTIKITLNN 65
YDR IT+FSPDG L QVEYA+EAV++G+ +V G+R + + I +
Sbjct: 9 YDRGITIFSPDGRLYQVEYAREAVKRGTASV---------------GVRTEDGVVIAADR 53
Query: 66 YLVMTKEIISLKVSPLLSQAQNSKLSMLNDHVVMAFAG 103
+ SPL+ + K+ ++ HV +A AG
Sbjct: 54 H----------ARSPLIERDSIEKIHEIDSHVGVASAG 81
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,020,672
Number of Sequences: 539616
Number of extensions: 1474072
Number of successful extensions: 4206
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3985
Number of HSP's gapped (non-prelim): 191
length of query: 153
length of database: 191,569,459
effective HSP length: 107
effective length of query: 46
effective length of database: 133,830,547
effective search space: 6156205162
effective search space used: 6156205162
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)