Query psy13973
Match_columns 230
No_of_seqs 142 out of 623
Neff 4.7
Searched_HMMs 46136
Date Fri Aug 16 16:21:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13973.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13973hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03216 actin depolymerizing 100.0 1E-34 2.2E-39 238.6 9.1 130 7-156 5-136 (141)
2 KOG1735|consensus 100.0 7.4E-33 1.6E-37 229.8 7.7 133 9-155 1-135 (146)
3 PTZ00152 cofilin/actin-depolym 100.0 3.3E-30 7.1E-35 208.3 8.4 120 9-154 1-121 (122)
4 cd00013 ADF Actin depolymerisa 99.9 2.9E-27 6.3E-32 187.9 9.5 124 11-154 1-126 (132)
5 KOG1747|consensus 99.9 4.5E-27 9.8E-32 214.2 5.1 126 7-155 1-130 (342)
6 PF00241 Cofilin_ADF: Cofilin/ 99.9 1.7E-26 3.6E-31 182.8 5.0 118 17-154 1-120 (127)
7 smart00102 ADF Actin depolymer 99.9 3.4E-25 7.4E-30 176.7 8.2 118 17-154 1-120 (127)
8 KOG1736|consensus 99.6 1.9E-16 4.2E-21 129.2 6.3 102 13-122 8-114 (143)
9 KOG1747|consensus 99.4 6.9E-13 1.5E-17 121.8 7.2 147 11-173 173-327 (342)
10 KOG3655|consensus 97.0 0.0015 3.2E-08 63.8 6.1 119 12-153 6-126 (484)
11 PF08138 Sex_peptide: Sex pept 32.5 17 0.00037 26.1 0.3 20 182-201 9-33 (56)
12 PF08847 DUF1817: Domain of un 31.6 28 0.0006 29.8 1.5 27 1-27 86-112 (150)
13 COG3363 Archaeal IMP cyclohydr 30.7 31 0.00068 30.4 1.7 38 163-202 101-143 (200)
14 KOG4037|consensus 23.9 1.8E+02 0.0039 26.0 5.2 50 31-80 85-136 (240)
15 cd00048 DSRM Double-stranded R 22.2 27 0.00059 23.3 -0.2 36 181-221 32-67 (68)
16 COG4290 Guanyl-specific ribonu 20.4 44 0.00096 28.4 0.7 16 163-178 103-118 (152)
No 1
>PLN03216 actin depolymerizing factor; Provisional
Probab=100.00 E-value=1e-34 Score=238.62 Aligned_cols=130 Identities=25% Similarity=0.460 Sum_probs=110.8
Q ss_pred cccccCCccCHHHHHHHHHhhcCCCeEEEEEEEecC-cEEEEeeeCCCCCCHHHHHHHhhhCCCCCceEEEEeeeeeccc
Q psy13973 7 WLHASGVTVSDICKTTYEEIKKDKKHRYVVFFIRDE-KQIDVEYIGDRNATYDSFLEDLQKAGSGECRYGLFDFEYTHQC 85 (230)
Q Consensus 7 MSm~SGI~VSdE~k~aF~kLK~~K~~RyIIfKIdde-keIvVd~~g~~d~dyddfl~~Lp~~~~~ePRYiVYD~dy~~~~ 85 (230)
|| +|||++++||+++|++||.++.+|||+|+|+++ ++|+|++.+..+.+|++|++.||+ ++|||+||||+|++.
T Consensus 5 m~-~SGi~v~~~c~~~f~~lk~~k~~r~iifkI~~~~~~ivv~~~~~~~~~~~d~~~~L~~---~~~rY~vyd~~~~~~- 79 (141)
T PLN03216 5 MA-TTGMWVTDECKNSFMEMKWKKVHRYIVFKIDEKSRKVTVDKVGGPGESYDDLAASLPT---DDCRYAVFDFDFVTV- 79 (141)
T ss_pred ec-CCCCeeCHHHHHHHHHHHhCCCceEEEEEEcCCCCEEEEEecCCCCCCHHHHHHhCCC---CCCeEEEEEeEeccC-
Confidence 77 799999999999999999988899999999975 689998876667799999999998 899999999999753
Q ss_pred cCccccccCcceE-EEEcCCCCCcccceehhhhccccccccccCCcccCccccchhhhhhccCcccchhhhc
Q psy13973 86 QGTTELYRCQGTT-EHRRPAVDRRNKTMLSRQCRRFSRCRSTAGRPVGRRENTSDAQAIMGTNAQDIVRLRL 156 (230)
Q Consensus 86 qgs~~~~~~~kLf-I~W~PD~A~VK~KMLYASTK~~~r~rs~~~~~~g~~~~~~~~~ei~gt~~~d~~~~~~ 156 (230)
+++.+++|+ |+||||+|+||+||+|||||+ .+++.+++- ..||++|+.+|++.-.+
T Consensus 80 ----~g~~~~klvFI~w~Pd~a~vk~KMlYAssK~------~lk~~l~gi-----~~~iqatd~~el~~~~~ 136 (141)
T PLN03216 80 ----DNCRKSKIFFIAWSPEASRIRAKMLYATSKD------GLRRVLDGV-----HYELQATDPTEMGFDVI 136 (141)
T ss_pred ----CCCcccCEEEEEECCCCCCHHHHHHHHHHHH------HHHHHhcCC-----eEEEEECChHhcCHHHH
Confidence 334556775 999999999999999999995 455555543 56999999999976543
No 2
>KOG1735|consensus
Probab=99.98 E-value=7.4e-33 Score=229.83 Aligned_cols=133 Identities=32% Similarity=0.511 Sum_probs=116.2
Q ss_pred cccCCccCHHHHHHHHHhhcCCCeEEEEEEEecC-cEEEEeeeCCCCCCHHHHHHHhhhCCCCCceEEEEeeeeeccccC
Q psy13973 9 HASGVTVSDICKTTYEEIKKDKKHRYVVFFIRDE-KQIDVEYIGDRNATYDSFLEDLQKAGSGECRYGLFDFEYTHQCQG 87 (230)
Q Consensus 9 m~SGI~VSdE~k~aF~kLK~~K~~RyIIfKIdde-keIvVd~~g~~d~dyddfl~~Lp~~~~~ePRYiVYD~dy~~~~qg 87 (230)
|.|||.|+|||+..|++||.++.+|||+|+|+++ ++|+||+.|+.+.+|++|+..||...+++|||++||++|+++.+|
T Consensus 1 ~aSGv~Vsde~~~~F~elk~kk~~r~ivF~i~~~~~~i~ve~~g~~~~s~~~f~~~l~~~~~~dCrYA~yDf~f~t~~~g 80 (146)
T KOG1735|consen 1 MASGVAVSDECKKVFNELKVKKRKRYVVFKISEDKKQIIVEKGGSPGASYDDFVASLPKMPEKDCRYALYDFEFETKESG 80 (146)
T ss_pred CCcceEecHHHHHHHHHHHhhcceeEEEEEeccccccccccccCCCCCchhhhHHHhccCCccccceEEecceEEeeccc
Confidence 4699999999999999999999999999999985 789999999999999999999994444999999999999975543
Q ss_pred ccccccCcceE-EEEcCCCCCcccceehhhhccccccccccCCcccCccccchhhhhhccCcccchhhh
Q psy13973 88 TTELYRCQGTT-EHRRPAVDRRNKTMLSRQCRRFSRCRSTAGRPVGRRENTSDAQAIMGTNAQDIVRLR 155 (230)
Q Consensus 88 s~~~~~~~kLf-I~W~PD~A~VK~KMLYASTK~~~r~rs~~~~~~g~~~~~~~~~ei~gt~~~d~~~~~ 155 (230)
....++|| |.||||+|+||.||+|||||. ++||+| +++..|+++|+++|..+..
T Consensus 81 ---~~~~~Ki~f~~wsPd~a~vKsKMiYaSSkD------alkr~L-----~Gi~~elQatd~~E~~~~~ 135 (146)
T KOG1735|consen 81 ---NCKKSKIFFIAWSPDTAPVKSKMIYASSKD------ALKREL-----TGIQHELQATDPSEMSLDS 135 (146)
T ss_pred ---cceeeeEEEEEECCCccchhhheeehhhHH------HHhhhc-----cCceeeeecCChHHhhHHH
Confidence 23457887 999999999999999999995 666666 3478999999999998765
No 3
>PTZ00152 cofilin/actin-depolymerizing factor 1-like protein; Provisional
Probab=99.96 E-value=3.3e-30 Score=208.35 Aligned_cols=120 Identities=22% Similarity=0.338 Sum_probs=95.8
Q ss_pred cccCCccCHHHHHHHHHhhcCCCeEEEEEEEecCcEEEEeeeCCCCCCHHHHHHHhhhCCCCCceEEEEeeeeeccccCc
Q psy13973 9 HASGVTVSDICKTTYEEIKKDKKHRYVVFFIRDEKQIDVEYIGDRNATYDSFLEDLQKAGSGECRYGLFDFEYTHQCQGT 88 (230)
Q Consensus 9 m~SGI~VSdE~k~aF~kLK~~K~~RyIIfKIddekeIvVd~~g~~d~dyddfl~~Lp~~~~~ePRYiVYD~dy~~~~qgs 88 (230)
|+|||++++||+++|++||.++++|||+|+|++ ++|+|++.++ ..+|++|++.||+..|.+|||+|||++-
T Consensus 1 m~SGi~v~de~~~~f~~lk~~k~~r~iifkI~~-~~Ivv~~~~~-~~~~~e~~~~L~~~~~~~crY~vyd~~~------- 71 (122)
T PTZ00152 1 MISGIRVNDNCVTEFNNMKIRKTCRWIIFVIEN-CEIIIHSKGA-TTTLTELVGSIDKNDKIQCAYVVFDAVN------- 71 (122)
T ss_pred CCCCcCcCHHHHHHHHHHhcCCcceEEEEEEcC-cEEEEEecCC-CCCHHHHHHhccccCCCCceEEEEccCC-------
Confidence 679999999999999999998889999999976 6899998875 5689999999997111239999998741
Q ss_pred cccccCcceEEEEcCCCCCcccceehhhhccccccccccCCcc-cCccccchhhhhhccCcccchhh
Q psy13973 89 TELYRCQGTTEHRRPAVDRRNKTMLSRQCRRFSRCRSTAGRPV-GRRENTSDAQAIMGTNAQDIVRL 154 (230)
Q Consensus 89 ~~~~~~~kLfI~W~PD~A~VK~KMLYASTK~~~r~rs~~~~~~-g~~~~~~~~~ei~gt~~~d~~~~ 154 (230)
..+||+||||+|+||+||||||||+ ++++.+ |-.+ +++|+ +..+|+..|
T Consensus 72 ------klvFI~w~Pd~a~ik~KMlYASsK~------~l~~~l~Gi~~---~~~~~--~~~~~~~~~ 121 (122)
T PTZ00152 72 ------KIHFFMYARESSNSRDRMTYASSKQ------ALLKKIEGVNV---LTSVI--ESAQDVADL 121 (122)
T ss_pred ------CEEEEEECCCCCChHHhhhhHhHHH------HHHHHhcchhH---HHHHH--HHhhhhhhc
Confidence 2456999999999999999999996 444445 4555 55544 566777654
No 4
>cd00013 ADF Actin depolymerisation factor/cofilin -like domains; present in a family of essential eukaryotic actin regulatory proteins; these proteins enhance the turnover rate of actin and interact with actin monomers as well as actin filaments.
Probab=99.94 E-value=2.9e-27 Score=187.95 Aligned_cols=124 Identities=30% Similarity=0.544 Sum_probs=104.1
Q ss_pred cCCccCHHHHHHHHHhhcCCCeEEEEEEEecC-cEEEEeeeCCCCCCHHHHHHHhhhCCCCCceEEEEeeeeeccccCcc
Q psy13973 11 SGVTVSDICKTTYEEIKKDKKHRYVVFFIRDE-KQIDVEYIGDRNATYDSFLEDLQKAGSGECRYGLFDFEYTHQCQGTT 89 (230)
Q Consensus 11 SGI~VSdE~k~aF~kLK~~K~~RyIIfKIdde-keIvVd~~g~~d~dyddfl~~Lp~~~~~ePRYiVYD~dy~~~~qgs~ 89 (230)
|||+++++|.++|++|+.+++.+|++|+|+++ ++|++++.++...+|++|.+.||+ ++|||++||+++.++
T Consensus 1 sgi~i~~e~~~a~~~~~~~~~~~~vi~~i~~~~~~i~~~~~~~~~~~~~~l~~~l~~---~~~~y~~~~~~~~~~----- 72 (132)
T cd00013 1 SGIKVSDECKEAFEELKSGKKTRWIIFKIDDDKKEIVVEKTGEGGESFDEFVEELPE---DECRYALYDYDFTTE----- 72 (132)
T ss_pred CCceECHHHHHHHHHHHhCCceeEEEEEEcCCCCEEEEEecCCCCCCHHHHHHhCCc---CCceEEEEEecccCC-----
Confidence 69999999999999999877899999999973 689998877554689999999998 999999999998643
Q ss_pred ccccCcceE-EEEcCCCCCcccceehhhhccccccccccCCcccCccccchhhhhhccCcccchhh
Q psy13973 90 ELYRCQGTT-EHRRPAVDRRNKTMLSRQCRRFSRCRSTAGRPVGRRENTSDAQAIMGTNAQDIVRL 154 (230)
Q Consensus 90 ~~~~~~kLf-I~W~PD~A~VK~KMLYASTK~~~r~rs~~~~~~g~~~~~~~~~ei~gt~~~d~~~~ 154 (230)
++.+.+++ |+|||++|++|+||+|||+|. ++++.+++. ..+|++++.+||+.-
T Consensus 73 -~~~~~k~vfI~w~P~~a~~k~km~yas~k~------~l~~~l~~~-----~~~i~a~~~~dl~~~ 126 (132)
T cd00013 73 -GSKKSKIVFIYWSPETAPVKSKMLYASSKA------ALKRELVGI-----QVEVQATDPDELDEE 126 (132)
T ss_pred -CccccCEEEEEECCCCCChhhhhhhHHHHH------HHHHhcCCc-----eEEEEECChhhcCHH
Confidence 23345565 999999999999999999995 555556554 457999999999863
No 5
>KOG1747|consensus
Probab=99.93 E-value=4.5e-27 Score=214.24 Aligned_cols=126 Identities=21% Similarity=0.268 Sum_probs=111.1
Q ss_pred cccccCCccCHHHHHHHHHhhcCCCeEEEEEEEecCcEEEEeee----CCCCCCHHHHHHHhhhCCCCCceEEEEeeeee
Q psy13973 7 WLHASGVTVSDICKTTYEEIKKDKKHRYVVFFIRDEKQIDVEYI----GDRNATYDSFLEDLQKAGSGECRYGLFDFEYT 82 (230)
Q Consensus 7 MSm~SGI~VSdE~k~aF~kLK~~K~~RyIIfKIddekeIvVd~~----g~~d~dyddfl~~Lp~~~~~ePRYiVYD~dy~ 82 (230)
||+|+||..++++.+.|++-|.++ .|+|+..|+++ ++++... ..|+.+|++++..|.+ ..+||||+|+.+..
T Consensus 1 MS~QtGI~A~e~l~~~l~~~~~~k-~R~ikIvI~nE-ql~~~s~~e~~~~w~~D~~~~v~~ll~--~~ePcyILyrlds~ 76 (342)
T KOG1747|consen 1 MSHQTGIRATEALKKFLNEAKNGK-LRLIKIVIENE-QLSPGSTSEPSTSWERDYDKLVLPLLD--AREPCYILYRLDSK 76 (342)
T ss_pred CCcccccchHHHHHHHHHhcccCc-eEEEEEEEecc-cccCCccccccccHHHHHHHHHHHhhc--cCCceEEEEeecCC
Confidence 899999999999999999999875 99999999986 6766543 4578899999998886 68999999999854
Q ss_pred ccccCccccccCcceEEEEcCCCCCcccceehhhhccccccccccCCcccCccccchhhhhhccCcccchhhh
Q psy13973 83 HQCQGTTELYRCQGTTEHRRPAVDRRNKTMLSRQCRRFSRCRSTAGRPVGRRENTSDAQAIMGTNAQDIVRLR 155 (230)
Q Consensus 83 ~~~qgs~~~~~~~kLfI~W~PD~A~VK~KMLYASTK~~~r~rs~~~~~~g~~~~~~~~~ei~gt~~~d~~~~~ 155 (230)
+ .+|+||+|+||+|+||+|||||||| +|++++||+.+ +.+|.|+|+.+|++-+-
T Consensus 77 ~----------~~w~lIs~vPD~apVR~KMLYAsTr------ATlkrefG~~~---i~ee~~~T~~~dl~~~~ 130 (342)
T KOG1747|consen 77 N----------AEWLLISWVPDNAPVRQKMLYASTR------ATLKREFGGAY---ITEELFATDLEDLTLLG 130 (342)
T ss_pred C----------ccEEEEEECCCCChHHHHHHHHHHH------HHHHHHhccce---eccccccCCHHHhhhHH
Confidence 2 1688899999999999999999999 79999999998 59999999999998653
No 6
>PF00241 Cofilin_ADF: Cofilin/tropomyosin-type actin-binding protein; InterPro: IPR002108 The actin-depolymerising factor homology (ADF-H) domain is an ~150-amino acid motif that is present in three phylogenetically distinct classes of eukaryotic actin-binding proteins [, , ]: ADF/cofilins, which include ADF, cofilin, destrin, actophorin, coactosin, depactin and glia maturation factors (GMFs) beta and gamma. ADF/cofilins are small actin-binding proteins composed of a single ADF-H domain. They bind both actin-monomers and filaments and promote rapid filament turnover in cells by depolymerising/fragmenting actin filaments. ADF/cofilins bind ADP-actin with higher affinity than ATP-actin and inhibit the spontaneous nucleotide exchange on actin monomers Twinfilins, which are actin monomer-binding proteins that are composed of two ADF-H domains Abp1/Drebrins, which are relatively large proteins composed of an N-terminal ADF-H domain followed by a variable region and a C-terminal SH3 domain. Abp1/Drebrins interact only with actin filaments and do not promote filament depolymerisation or fragmentation Although these proteins are biochemically distinct and play different roles in actin dynamics, they all appear to use the ADF-H domain for their interactions with actin. The ADF-H domain consists of a six-stranded mixed beta-sheet in which the four central strands (beta2-beta5) are anti-parallel and the two edge strands (beta1 and beta6) run parallel with the neighbouring strands. The sheet is surrounded by two alpha-helices on each side [, , ].; GO: 0003779 actin binding, 0005622 intracellular; PDB: 1AK6_A 1AK7_A 1V6F_A 2L72_A 1CFY_A 1QPV_A 1COF_A 1TVJ_A 1X67_A 3L50_A ....
Probab=99.93 E-value=1.7e-26 Score=182.82 Aligned_cols=118 Identities=29% Similarity=0.463 Sum_probs=100.7
Q ss_pred HHHHHHHHHhhcCCCeEEEEEEEecC-cEEEEeeeCCCCCCHHHHHHHhhhCCCCCceEEEEeeeeeccccCccccccCc
Q psy13973 17 DICKTTYEEIKKDKKHRYVVFFIRDE-KQIDVEYIGDRNATYDSFLEDLQKAGSGECRYGLFDFEYTHQCQGTTELYRCQ 95 (230)
Q Consensus 17 dE~k~aF~kLK~~K~~RyIIfKIdde-keIvVd~~g~~d~dyddfl~~Lp~~~~~ePRYiVYD~dy~~~~qgs~~~~~~~ 95 (230)
|||+++|++++.+++.+||+|+|+++ ++|+|++.|+...+|++|.+.||+ ++|||++||++++++ ++.++
T Consensus 1 ~e~~~~~~~~~~~~~~~~i~~~i~~~~~~i~v~~~g~~~~~~~el~~~l~~---~~p~y~~~~~~~~~~------~~~~~ 71 (127)
T PF00241_consen 1 DECKAAFQELKSKKSTRWIIFKIDDEKEEIVVEKSGSEGGSFDELLSHLPD---DEPRYILYRFEYTHK------GSRRS 71 (127)
T ss_dssp HHHHHHHHHHHTTTSCSEEEEEEETTSTEEEEEEEEEESSHHHHHHHCSCT---TSEEEEEEEEEEEET------TSEEE
T ss_pred CHHHHHHHHHHcCCCceEEEEEEeCCCcEEEEEeccCCCCCHHHHHHhccc---CCcEEEEEEeeeccc------CCCCc
Confidence 79999999999987899999999986 789999987778899999999997 999999999999754 33445
Q ss_pred ce-EEEEcCCCCCcccceehhhhccccccccccCCcccCccccchhhhhhccCcccchhh
Q psy13973 96 GT-TEHRRPAVDRRNKTMLSRQCRRFSRCRSTAGRPVGRRENTSDAQAIMGTNAQDIVRL 154 (230)
Q Consensus 96 kL-fI~W~PD~A~VK~KMLYASTK~~~r~rs~~~~~~g~~~~~~~~~ei~gt~~~d~~~~ 154 (230)
++ ||+|||++|++|+||+|||+|. ++++.+++- ..++++++.+||+.-
T Consensus 72 k~vfI~w~P~~~~vk~km~yas~k~------~l~~~l~~~-----~~~~~~~d~~dl~~~ 120 (127)
T PF00241_consen 72 KLVFIYWCPDNAPVKEKMLYASSKA------SLKKKLGGI-----HIEIQASDPDDLSEE 120 (127)
T ss_dssp EEEEEEEESTTS-HHHHHHHHHHHH------HHHHHCTTE-----EEEEEESSGGGGSHH
T ss_pred eEEEEEEecCCccHHHhhhhHHhHH------HHHHHhCCc-----eEEEEECChHHCCHH
Confidence 65 5999999999999999999995 566666663 568999999999864
No 7
>smart00102 ADF Actin depolymerisation factor/cofilin -like domains. Severs actin filaments and binds to actin monomers.
Probab=99.92 E-value=3.4e-25 Score=176.68 Aligned_cols=118 Identities=27% Similarity=0.525 Sum_probs=98.4
Q ss_pred HHHHHHHHHhhcCCCeEEEEEEEecC-cEEEEeeeCCCCCCHHHHHHHhhhCCCCCceEEEEeeeeeccccCccccccCc
Q psy13973 17 DICKTTYEEIKKDKKHRYVVFFIRDE-KQIDVEYIGDRNATYDSFLEDLQKAGSGECRYGLFDFEYTHQCQGTTELYRCQ 95 (230)
Q Consensus 17 dE~k~aF~kLK~~K~~RyIIfKIdde-keIvVd~~g~~d~dyddfl~~Lp~~~~~ePRYiVYD~dy~~~~qgs~~~~~~~ 95 (230)
++|+++|++|+.+++.+|++|+|+.+ ++|+|+.++..+.+|++|++.||+ ++|||++||++++++ ++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~el~~~l~~---~~~ry~~~~~~~~~~------~~~~~ 71 (127)
T smart00102 1 EDCKEAFNELKKKRKHSAIIFKIDKDNEEIVVEEVGSTEDSYDEFVEELPE---DECRYALYDYKFTTE------ESKKS 71 (127)
T ss_pred ChHHHHHHHHHcCCCceEEEEEEecCCCEEEEEecCCCCCCHHHHHHhCCc---cCceEEEEEeecccC------CCccc
Confidence 47999999999887899999999974 689998887667789999999997 899999999998643 12334
Q ss_pred ce-EEEEcCCCCCcccceehhhhccccccccccCCcccCccccchhhhhhccCcccchhh
Q psy13973 96 GT-TEHRRPAVDRRNKTMLSRQCRRFSRCRSTAGRPVGRRENTSDAQAIMGTNAQDIVRL 154 (230)
Q Consensus 96 kL-fI~W~PD~A~VK~KMLYASTK~~~r~rs~~~~~~g~~~~~~~~~ei~gt~~~d~~~~ 154 (230)
++ ||+|||++|++|.||+|||+|. ++++.+++-+ .+|++++.+||+.-
T Consensus 72 k~vfI~w~P~~a~~~~km~yas~k~------~l~~~l~~~~-----~~i~~~~~~el~~~ 120 (127)
T smart00102 72 KIVFIFWSPDGAPVKSKMLYASSKD------TLKKELGGIQ-----VEVQATDEDDLDEE 120 (127)
T ss_pred cEEEEEECCCCCCHHHHHHHHHHHH------HHHHHcCCce-----EEEEECChhhcCHH
Confidence 55 5999999999999999999995 6666677654 46899999998753
No 8
>KOG1736|consensus
Probab=99.65 E-value=1.9e-16 Score=129.18 Aligned_cols=102 Identities=9% Similarity=0.128 Sum_probs=88.4
Q ss_pred CccCHHHHHHHHHhhcC-C--CeEEEEEEEecC-cEEEEeeeCCCCCCHHHHHHHhhhCCCCCceEEEEeeeeeccccCc
Q psy13973 13 VTVSDICKTTYEEIKKD-K--KHRYVVFFIRDE-KQIDVEYIGDRNATYDSFLEDLQKAGSGECRYGLFDFEYTHQCQGT 88 (230)
Q Consensus 13 I~VSdE~k~aF~kLK~~-K--~~RyIIfKIdde-keIvVd~~g~~d~dyddfl~~Lp~~~~~ePRYiVYD~dy~~~~qgs 88 (230)
.+|+++..+...+++.+ | ...+||+||+.+ .+|++|.+--...+-+++.+.||+ ++|||+||.|.+++.
T Consensus 8 ~~i~~et~~ki~kFR~r~k~t~~~A~imKidK~~~eiV~d~Eeld~is~eEladeLpe---~~PRFvl~sYpt~t~---- 80 (143)
T KOG1736|consen 8 CKIGTETREKIRKFRFRTKETSNAAIIMKIDKDSYEIVLDEEELDEISPEELADELPE---RQPRFVLYSYPTTTD---- 80 (143)
T ss_pred EEeCHHHHHHHHHhhhhhccccceeEEEEecCCceEeecCHHHhccCChHHHHhhccc---cCCcEEEEECccccc----
Confidence 68999999999999876 3 588999999975 689998432246778899999998 999999999999864
Q ss_pred cccccCcceE-EEEcCCCCCcccceehhhhccccc
Q psy13973 89 TELYRCQGTT-EHRRPAVDRRNKTMLSRQCRRFSR 122 (230)
Q Consensus 89 ~~~~~~~kLf-I~W~PD~A~VK~KMLYASTK~~~r 122 (230)
+|+.+.+|+ |+|.|-+++..++|+||++|+.++
T Consensus 81 -DGr~stPL~~Iyw~P~~~~~e~~MmYAgak~~~~ 114 (143)
T KOG1736|consen 81 -DGRVSTPLCFIYWSPVGCKPEQQMMYAGAKNMLV 114 (143)
T ss_pred -CCcccccEEEEEecCccCCHHHHHHHHHHHHHHH
Confidence 566778997 999999999999999999999877
No 9
>KOG1747|consensus
Probab=99.38 E-value=6.9e-13 Score=121.84 Aligned_cols=147 Identities=17% Similarity=0.204 Sum_probs=111.4
Q ss_pred cCCc--cCHHHHHHHHHhhcCCCeEEEEEEEecC-cEEEEeeeCCCCCCHHHHHHHhhhCCCCCceEEEEeeeeeccccC
Q psy13973 11 SGVT--VSDICKTTYEEIKKDKKHRYVVFFIRDE-KQIDVEYIGDRNATYDSFLEDLQKAGSGECRYGLFDFEYTHQCQG 87 (230)
Q Consensus 11 SGI~--VSdE~k~aF~kLK~~K~~RyIIfKIdde-keIvVd~~g~~d~dyddfl~~Lp~~~~~ePRYiVYD~dy~~~~qg 87 (230)
+||. ++++..++.++|+.++ ..||+|.|+-+ +.|.+..+. ...+.+|+...+|. +.|||.+|.|+.+|+..+
T Consensus 173 ~Gva~pi~~~a~kAl~~L~~~~-~n~vql~ID~~nE~I~l~~t~-~~~e~sdL~s~vP~---d~prY~ff~~~ht~eGD~ 247 (342)
T KOG1747|consen 173 QGVAFPIDRNAEKALQDLKSSK-LNYVQLSIDLENETIQLSQTD-TCTEPSDLPSRVPR---DGPRYHFFLFKHTHEGDP 247 (342)
T ss_pred cceeecccHHHHHHHHHHHhhc-cceEEEEeccccceeeeeccC-CCCChHHhhhhcCC---CCCceEEEecccccCCCC
Confidence 5654 7999999999999876 99999999953 467777653 44678999999998 899999999998875332
Q ss_pred ccccccCcceEEEEcCC-CCCcccceehhhhccccccccccCCcccCccccchhhhhhccCcccchhh----hccccccC
Q psy13973 88 TTELYRCQGTTEHRRPA-VDRRNKTMLSRQCRRFSRCRSTAGRPVGRRENTSDAQAIMGTNAQDIVRL----RLGATQLS 162 (230)
Q Consensus 88 s~~~~~~~kLfI~W~PD-~A~VK~KMLYASTK~~~r~rs~~~~~~g~~~~~~~~~ei~gt~~~d~~~~----~~~~~~~~ 162 (230)
. ...+||+-||- +|+||++|||+|+|.-|. +-+++++|-- |..-|=..+.+||+.- -+-+.|+.
T Consensus 248 ~-----es~~FIYS~P~~~~sVKeRMlYSScK~~fL--d~~k~~~gi~----i~kKiEi~d~~eLte~~L~e~~Hp~~i~ 316 (342)
T KOG1747|consen 248 L-----ESIVFIYSMPGYGCSVKERMLYSSCKSGFL--DSLKNDLGIV----ISKKIEIDDGAELTEKFLYEELHPKQIA 316 (342)
T ss_pred c-----eeEEEEEECCCCCcchhhhhHhhhcchhHH--HHHHHhcCee----EEEEEeeCcHHHhhHHHHHHhhCccccc
Confidence 2 13446999999 999999999999998777 7778888765 4455555677777765 34456777
Q ss_pred CCCcceeeecC
Q psy13973 163 HPEHHEYTIKT 173 (230)
Q Consensus 163 ~~~~~~~~~~~ 173 (230)
||..-.-+-++
T Consensus 317 h~qafa~P~~p 327 (342)
T KOG1747|consen 317 HPQAFAKPKGP 327 (342)
T ss_pred ccccccCCCCC
Confidence 77654444333
No 10
>KOG3655|consensus
Probab=96.96 E-value=0.0015 Score=63.76 Aligned_cols=119 Identities=13% Similarity=0.171 Sum_probs=85.5
Q ss_pred CCccCHHHHHHHHHhhcCC-CeEEEEEEEecCcEEEEeeeCCCCCCHHHHHHHhhhCCCCCceEEEEeeeeeccccCccc
Q psy13973 12 GVTVSDICKTTYEEIKKDK-KHRYVVFFIRDEKQIDVEYIGDRNATYDSFLEDLQKAGSGECRYGLFDFEYTHQCQGTTE 90 (230)
Q Consensus 12 GI~VSdE~k~aF~kLK~~K-~~RyIIfKIddekeIvVd~~g~~d~dyddfl~~Lp~~~~~ePRYiVYD~dy~~~~qgs~~ 90 (230)
+=.-.++|.++|++...+. ...|+||+-+++ .+++-..+.....|++|++.+.. ..--|++.+....
T Consensus 6 ~~~~~aei~aaY~~v~~d~~dt~WaiF~Yeg~-s~~~~~~~s~~~~~~e~~~df~~---~kv~yg~~rv~D~-------- 73 (484)
T KOG3655|consen 6 TTTHGAEIRAAYERVVDDSSDTDWALFTYEGN-SNDLKVAGSGEGGLEEFLGDFDS---GKVMYGFCRVKDP-------- 73 (484)
T ss_pred ccccHHHHHHHHHHhhccCCCceeEEEeecCC-ccceeeeccccccHHHHhhhccc---CceeEEEEEecCc--------
Confidence 3345678999999987653 699999999875 33333334456679999998886 6678998887643
Q ss_pred cccCcceE-EEEcCCCCCcccceehhhhccccccccccCCcccCccccchhhhhhccCcccchh
Q psy13973 91 LYRCQGTT-EHRRPAVDRRNKTMLSRQCRRFSRCRSTAGRPVGRRENTSDAQAIMGTNAQDIVR 153 (230)
Q Consensus 91 ~~~~~kLf-I~W~PD~A~VK~KMLYASTK~~~r~rs~~~~~~g~~~~~~~~~ei~gt~~~d~~~ 153 (230)
.++.+|++ |.||++++++=.|=..|+=+..++ .|-- ++..+|.+.+.+||--
T Consensus 74 ~s~l~KfvLI~W~GE~vp~~Rka~~ath~a~v~-------~~lk----g~hV~i~Ar~e~Dld~ 126 (484)
T KOG3655|consen 74 MSGLPKFVLINWIGEGVPVLRKAKCATHKALVK-------NFLK----GFHVEINARSEEDLDE 126 (484)
T ss_pred ccCCcceEEEEecCCccHHHhhhhhcchHHHHH-------HHhh----cceEEEeccchhhcCH
Confidence 34456776 999999999888888777774333 2222 2567999999998853
No 11
>PF08138 Sex_peptide: Sex peptide (SP) family; InterPro: IPR012608 This family consists of Sex Peptides (SP) that are found in Drosophila. On mating, Drosophila females decreases her remating rate and increases her egg-laying rate due, in part, to the transfer of SP from the male to the female. SP are found in seminal fluids transferred from the male to the female during mating. The male seminal fluid proteins are referred to as accessory gland proteins (Acps). The SP is one of the most interesting Acps and plays an important role in reproduction [].; GO: 0005179 hormone activity, 0046008 regulation of female receptivity, post-mating, 0005576 extracellular region; PDB: 2LAQ_A.
Probab=32.53 E-value=17 Score=26.13 Aligned_cols=20 Identities=40% Similarity=0.413 Sum_probs=2.2
Q ss_pred ceeEEEeeeee-----ceeeccccc
Q psy13973 182 DFVCIVGLVRS-----QRVKTKRGT 201 (230)
Q Consensus 182 ~~~~~~~~~~~-----~~~~~~~~~ 201 (230)
=+||+||++-| |+-+++--+
T Consensus 9 llvlllGla~s~~wp~~~r~~~~~i 33 (56)
T PF08138_consen 9 LLVLLLGLAQSWEWPWQRRTTKFPI 33 (56)
T ss_dssp -------------S---S---S-SS
T ss_pred HHHHHHHHHhcccccccCCCCCCCC
Confidence 36999999999 887775443
No 12
>PF08847 DUF1817: Domain of unknown function (DUF1817); InterPro: IPR014946 Members of this entry are functionally uncharacterised.
Probab=31.64 E-value=28 Score=29.75 Aligned_cols=27 Identities=19% Similarity=0.353 Sum_probs=23.7
Q ss_pred CCcccccccccCCccCHHHHHHHHHhh
Q psy13973 1 MFIPTQWLHASGVTVSDICKTTYEEIK 27 (230)
Q Consensus 1 ~~~~~~MSm~SGI~VSdE~k~aF~kLK 27 (230)
|.||-+||+.-||..++|..+.|---|
T Consensus 86 MLVPHqfs~~eGi~fnPEALEifvm~k 112 (150)
T PF08847_consen 86 MLVPHQFSRKEGIQFNPEALEIFVMHK 112 (150)
T ss_pred HhCccccccccCceeCHHHHHHHHHHH
Confidence 789999999999999999999885433
No 13
>COG3363 Archaeal IMP cyclohydrolase [Nucleotide transport and metabolism]
Probab=30.70 E-value=31 Score=30.36 Aligned_cols=38 Identities=37% Similarity=0.572 Sum_probs=29.6
Q ss_pred CCCcceeeecCCchhhhccceeEEEeeeeec-----eeecccccc
Q psy13973 163 HPEHHEYTIKTPGLAKVLDDFVCIVGLVRSQ-----RVKTKRGTE 202 (230)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 202 (230)
.-||.|| +||-+|-+||+--|.+|.|+.. +|+-|.|+.
T Consensus 101 DYEkDey--nTPRIa~ild~~t~~~G~Va~d~v~vr~v~~kd~e~ 143 (200)
T COG3363 101 DYEKDEY--NTPRIAAILDGETAYLGIVAADEVYVRVVKPKDGEG 143 (200)
T ss_pred hcccccc--CCcceEEEEcCCeEEEEEEeccceEEEEeccCCCCc
Confidence 3467777 7999999999999999998764 556665553
No 14
>KOG4037|consensus
Probab=23.90 E-value=1.8e+02 Score=26.03 Aligned_cols=50 Identities=20% Similarity=0.283 Sum_probs=26.2
Q ss_pred CeEEEEEEEec-CcE-EEEeeeCCCCCCHHHHHHHhhhCCCCCceEEEEeee
Q psy13973 31 KHRYVVFFIRD-EKQ-IDVEYIGDRNATYDSFLEDLQKAGSGECRYGLFDFE 80 (230)
Q Consensus 31 ~~RyIIfKIdd-eke-IvVd~~g~~d~dyddfl~~Lp~~~~~ePRYiVYD~d 80 (230)
++-+..|||-| +.. |..|-.....++=+.+...-.+..|+..||+-|.|.
T Consensus 85 ~IdFtrFkIRDldsg~VLFEIaKPp~eteE~l~a~ae~lspnagRyVRYqFt 136 (240)
T KOG4037|consen 85 KIDFTRFKIRDLDSGTVLFEIAKPPVETEERLPANAEDLSPNAGRYVRYQFT 136 (240)
T ss_pred EeeeEEEEEeeccCCcEEEEecCCCCcchhhcchhhhccCCcccceEEEeec
Confidence 46677888877 433 333322222222222322222223589999998875
No 15
>cd00048 DSRM Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, RNases H1, and dsRNA dependent adenosine deaminases.
Probab=22.20 E-value=27 Score=23.27 Aligned_cols=36 Identities=22% Similarity=0.231 Sum_probs=23.4
Q ss_pred cceeEEEeeeeeceeecccccccccccccccccchhhhhee
Q psy13973 181 DDFVCIVGLVRSQRVKTKRGTETGHSKKLARDSDCVKLVKY 221 (230)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (230)
.-|.|.|-+-- ...++.+|.+||.|+..-+...+..
T Consensus 32 ~~f~~~v~i~~-----~~~~~g~g~sKk~Ak~~AA~~al~~ 67 (68)
T cd00048 32 PRFTVEVTVGG-----KITGEGEGSSKKEAKQNAAEAALRK 67 (68)
T ss_pred CeEEEEEEECC-----EEEEEeecCCHHHHHHHHHHHHHHh
Confidence 35777776522 2345567789999988766665543
No 16
>COG4290 Guanyl-specific ribonuclease Sa [Nucleotide transport and metabolism]
Probab=20.43 E-value=44 Score=28.37 Aligned_cols=16 Identities=44% Similarity=0.733 Sum_probs=12.4
Q ss_pred CCCcceeeecCCchhh
Q psy13973 163 HPEHHEYTIKTPGLAK 178 (230)
Q Consensus 163 ~~~~~~~~~~~~~~~~ 178 (230)
.--..|||++|||+..
T Consensus 103 ~gYYREYTVeTpG~sd 118 (152)
T COG4290 103 RGYYREYTVETPGLSD 118 (152)
T ss_pred cCcceeeEeeCCCccc
Confidence 3446799999999864
Done!