BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13988
(358 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/191 (52%), Positives = 135/191 (70%), Gaps = 4/191 (2%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T + VALKKV +ENEKEGFPITA+REIKIL+ L H+N+VNL EI ++ A + + KGS
Sbjct: 42 TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEIC--RTKASPYNRCKGS 99
Query: 230 FYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
YLVF++ +HDL GLL + +V F +M+ LL+GL Y H+ LHRD+K +N+L+
Sbjct: 100 IYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT 159
Query: 290 NRGEVKLADFGLARLYNAEDRQRP--YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
G +KLADFGLAR ++ +P Y N+V+TLWYRPPELLLGE YGP ID+W GCI
Sbjct: 160 RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCI 219
Query: 348 LGELFVKKPLF 358
+ E++ + P+
Sbjct: 220 MAEMWTRSPIM 230
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 12 ANIELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS--LMPPGALD 69
N E QL +IS+LCG+ TP VWP V L+ ++ K +R++++ + P ALD
Sbjct: 232 GNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALD 291
Query: 70 LLDKMLELDPERRITAEQAL 89
L+DK+L LDP +RI ++ AL
Sbjct: 292 LIDKLLVLDPAQRIDSDDAL 311
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 204 bits (520), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 100/191 (52%), Positives = 135/191 (70%), Gaps = 4/191 (2%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T + VALKKV +ENEKEGFPITA+REIKIL+ L H+N+VNL EI ++ A + + KGS
Sbjct: 42 TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEIC--RTKASPYNRCKGS 99
Query: 230 FYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
YLVF++ +HDL GLL + +V F +M+ LL+GL Y H+ LHRD+K +N+L+
Sbjct: 100 IYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT 159
Query: 290 NRGEVKLADFGLARLYNAEDRQRP--YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
G +KLADFGLAR ++ +P Y N+V+TLWYRPPELLLGE YGP ID+W GCI
Sbjct: 160 RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCI 219
Query: 348 LGELFVKKPLF 358
+ E++ + P+
Sbjct: 220 MAEMWTRSPIM 230
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 12 ANIELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS--LMPPGALD 69
N E QL +IS+LCG+ TP VWP V L+ ++ K +R++++ + P ALD
Sbjct: 232 GNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALD 291
Query: 70 LLDKMLELDPERRITAEQAL 89
L+DK+L LDP +RI ++ AL
Sbjct: 292 LIDKLLVLDPAQRIDSDDAL 311
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 204 bits (520), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 100/191 (52%), Positives = 135/191 (70%), Gaps = 4/191 (2%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T + VALKKV +ENEKEGFPITA+REIKIL+ L H+N+VNL EI ++ A + + KGS
Sbjct: 41 TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEIC--RTKASPYNRCKGS 98
Query: 230 FYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
YLVF++ +HDL GLL + +V F +M+ LL+GL Y H+ LHRD+K +N+L+
Sbjct: 99 IYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT 158
Query: 290 NRGEVKLADFGLARLYNAEDRQRP--YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
G +KLADFGLAR ++ +P Y N+V+TLWYRPPELLLGE YGP ID+W GCI
Sbjct: 159 RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCI 218
Query: 348 LGELFVKKPLF 358
+ E++ + P+
Sbjct: 219 MAEMWTRSPIM 229
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 12 ANIELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS--LMPPGALD 69
N E QL +IS+LCG+ TP VWP V L+ ++ K +R++++ + P ALD
Sbjct: 231 GNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALD 290
Query: 70 LLDKMLELDPERRITAEQAL 89
L+DK+L LDP +RI ++ AL
Sbjct: 291 LIDKLLVLDPAQRIDSDDAL 310
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/191 (51%), Positives = 134/191 (70%), Gaps = 4/191 (2%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T + VALKKV +ENEKEGFPITA+REIKIL+ L H+N+VNL EI ++ A + + K S
Sbjct: 42 TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEIC--RTKASPYNRCKAS 99
Query: 230 FYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
YLVF++ +HDL GLL + +V F +M+ LL+GL Y H+ LHRD+K +N+L+
Sbjct: 100 IYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT 159
Query: 290 NRGEVKLADFGLARLYNAEDRQRP--YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
G +KLADFGLAR ++ +P Y N+V+TLWYRPPELLLGE YGP ID+W GCI
Sbjct: 160 RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCI 219
Query: 348 LGELFVKKPLF 358
+ E++ + P+
Sbjct: 220 MAEMWTRSPIM 230
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 12 ANIELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS--LMPPGALD 69
N E QL +IS+LCG+ TP VWP V L+ ++ K +R++++ + P ALD
Sbjct: 232 GNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALD 291
Query: 70 LLDKMLELDPERRITAEQAL 89
L+DK+L LDP +RI ++ AL
Sbjct: 292 LIDKLLVLDPAQRIDSDDAL 311
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 117/187 (62%), Gaps = 12/187 (6%)
Query: 172 ELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
E ALKK+RLE E EG P T +REI IL++L H NIV L +++ K
Sbjct: 27 ETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK----------RLV 76
Query: 232 LVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR 291
LVFE++D DL LL+ V S + QLL+G++YCH R LHRD+K N+L+N
Sbjct: 77 LVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINRE 136
Query: 292 GEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
GE+K+ADFGLAR + R+ YT++V+TLWYR P++L+G ++Y ID+WS GCI E+
Sbjct: 137 GELKIADFGLARAFGIPVRK--YTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEM 194
Query: 352 FVKKPLF 358
PLF
Sbjct: 195 VNGTPLF 201
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSL--MPPGALDLLDKML 75
QL I ++ GTP WP V +LP + P L E L + +DLL KML
Sbjct: 209 QLMRIFRILGTPNSKNWPNVTELPKY---DPNFTVYEPLPWESFLKGLDESGIDLLSKML 265
Query: 76 ELDPERRITAEQALKSVWLK 95
+LDP +RITA+QAL+ + K
Sbjct: 266 KLDPNQRITAKQALEHAYFK 285
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 117/187 (62%), Gaps = 12/187 (6%)
Query: 172 ELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
E ALKK+RLE E EG P T +REI IL++L H NIV L +++ K
Sbjct: 27 ETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK----------RLV 76
Query: 232 LVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR 291
LVFE++D DL LL+ V S + QLL+G++YCH R LHRD+K N+L+N
Sbjct: 77 LVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINRE 136
Query: 292 GEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
GE+K+ADFGLAR + R+ YT++V+TLWYR P++L+G ++Y ID+WS GCI E+
Sbjct: 137 GELKIADFGLARAFGIPVRK--YTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEM 194
Query: 352 FVKKPLF 358
PLF
Sbjct: 195 VNGAPLF 201
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSL--MPPGALDLLDKML 75
QL I ++ GTP WP V +LP + P L E L + +DLL KML
Sbjct: 209 QLMRIFRILGTPNSKNWPNVTELPKY---DPNFTVYEPLPWESFLKGLDESGIDLLSKML 265
Query: 76 ELDPERRITAEQALKSVWLK 95
+LDP +RITA+QAL+ + K
Sbjct: 266 KLDPNQRITAKQALEHAYFK 285
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 117/187 (62%), Gaps = 12/187 (6%)
Query: 172 ELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
E ALKK+RLE E EG P T +REI IL++L H NIV L +++ K
Sbjct: 27 ETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK----------RLV 76
Query: 232 LVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR 291
LVFE++D DL LL+ V S + QLL+G++YCH R LHRD+K N+L+N
Sbjct: 77 LVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINRE 136
Query: 292 GEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
GE+K+ADFGLAR + R+ YT++++TLWYR P++L+G ++Y ID+WS GCI E+
Sbjct: 137 GELKIADFGLARAFGIPVRK--YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEM 194
Query: 352 FVKKPLF 358
PLF
Sbjct: 195 VNGTPLF 201
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSL--MPPGALDLLDKML 75
QL I ++ GTP WP V +LP + P L E L + +DLL KML
Sbjct: 209 QLMRIFRILGTPNSKNWPNVTELPKY---DPNFTVYEPLPWESFLKGLDESGIDLLSKML 265
Query: 76 ELDPERRITAEQALKSVWLK 95
+LDP +RITA+QAL+ + K
Sbjct: 266 KLDPNQRITAKQALEHAYFK 285
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 118/190 (62%), Gaps = 13/190 (6%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 34 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTENK 83
Query: 230 FYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L+
Sbjct: 84 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 143
Query: 289 NNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
N G +KLADFGLAR + R YT++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 144 NTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIF 201
Query: 349 GELFVKKPLF 358
E+ ++ LF
Sbjct: 202 AEMVTRRALF 211
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 216 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 270
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 271 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 304
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 127/209 (60%), Gaps = 15/209 (7%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++ L G + S TD LVALK++RLE+E EG P TA+RE+ +L+ L H NIV L
Sbjct: 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTL 65
Query: 211 REIV-TDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLS 269
+I+ T+KS LVFEY+D DL L+ N N + QLL GL+
Sbjct: 66 HDIIHTEKS-----------LTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLA 114
Query: 270 YCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELL 329
YCH++ LHRD+K N+L+N RGE+KLADFGLAR + + Y N+V+TLWYRPP++L
Sbjct: 115 YCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP--TKTYDNEVVTLWYRPPDIL 172
Query: 330 LGEERYGPAIDVWSCGCILGELFVKKPLF 358
LG Y ID+W GCI E+ +PLF
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGRPLF 201
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSLMPPGALDLLDKMLEL 77
QL I ++ GTPT WP ++ + T K L + DLL K+L+
Sbjct: 209 QLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQF 268
Query: 78 DPERRITAEQALK 90
+ RI+AE A+K
Sbjct: 269 EGRNRISAEDAMK 281
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 118/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 26 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 75
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 76 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 135
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R YT++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 136 INTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCI 193
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 194 FAEMVTRRALF 204
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 263
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 264 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 297
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 118/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 26 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 75
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GLS+CH LHRD+K N+L
Sbjct: 76 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLL 135
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R YT++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 136 INTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 193
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 194 FAEMVTRRALF 204
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 263
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 264 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 297
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 118/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 25 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 74
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 75 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 134
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R YT++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 135 INTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 192
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 193 FAEMVTRRALF 203
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 262
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 263 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 296
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 118/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 26 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 75
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 76 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 135
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R YT++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 136 INTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 193
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 194 FAEMVTRRALF 204
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 263
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 264 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 297
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 118/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 27 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 76
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 77 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 136
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R YT++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 137 INTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 194
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 195 FAEMVTRRALF 205
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 210 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 264
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 265 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 298
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 118/190 (62%), Gaps = 13/190 (6%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 34 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTENK 83
Query: 230 FYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L+
Sbjct: 84 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 143
Query: 289 NNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
N G +KLADFGLAR + R YT++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 144 NTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIF 201
Query: 349 GELFVKKPLF 358
E+ ++ LF
Sbjct: 202 AEMVTRRALF 211
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 216 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 270
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 271 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 304
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 170 bits (431), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 118/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 26 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 75
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 76 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 135
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R YT++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 136 INTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 193
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 194 FAEMVTRRALF 204
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 263
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 264 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 297
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 170 bits (431), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 118/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 25 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 74
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 75 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 134
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R YT++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 135 INTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 192
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 193 FAEMVTRRALF 203
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 262
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 263 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 296
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 170 bits (431), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 118/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 30 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 79
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 80 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 139
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R YT++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 140 INTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 197
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 198 FAEMVTRRALF 208
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 213 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 267
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 268 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 301
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 118/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 29 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 78
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++D DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 79 KLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 138
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 139 INTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 196
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 197 FAEMVTRRALF 207
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 212 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 266
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 267 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 300
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 118/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 25 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 74
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 75 KLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 134
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R YT++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 135 INTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 192
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 193 FAEMVTRRALF 203
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 262
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 263 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 296
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 29 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 78
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 79 KLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 138
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 139 INTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 196
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 197 FAEMVTRRALF 207
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 212 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 266
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 267 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 300
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 29 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 78
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 79 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 138
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 139 INTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 196
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 197 FAEMVTRRALF 207
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 212 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 266
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 267 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 300
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 28 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 77
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 78 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 137
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 138 INTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 195
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 196 FAEMVTRRALF 206
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 211 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 265
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 266 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 299
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 26 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 75
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 76 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 135
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 136 INTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 193
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 194 FAEMVTRRALF 204
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 263
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 264 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 297
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 27 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 76
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 77 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 136
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 137 INTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 194
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 195 FAEMVTRRALF 205
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 210 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 264
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 265 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 298
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 26 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 75
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 76 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 135
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 136 INTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 193
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 194 FAEMVTRRALF 204
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 263
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 264 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 297
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 28 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 77
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 78 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 137
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 138 INTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 195
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 196 FAEMVTRRALF 206
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 211 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 265
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 266 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 299
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VAL K+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 26 LTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 75
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 76 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 135
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R YT++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 136 INTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 193
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 194 FAEMVTRRALF 204
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 263
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 264 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 297
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VAL K+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 25 LTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 74
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 75 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 134
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R YT++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 135 INTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 192
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 193 FAEMVTRRALF 203
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 262
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 263 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 296
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 25 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 74
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 75 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 134
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 135 INTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 192
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 193 FAEMVTRRALF 203
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 262
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 263 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 296
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 26 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 75
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 76 KLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLL 135
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 136 INTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 193
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 194 FAEMVTRRALF 204
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 263
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 264 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 297
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 26 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 75
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 76 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 135
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 136 INTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 193
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 194 FAEMVTRRALF 204
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 263
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 264 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 297
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 29 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 78
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 79 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 138
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 139 INTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 196
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 197 FAEMVTRRALF 207
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 212 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 266
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 267 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 300
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 25 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 74
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 75 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 134
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 135 INTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 192
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 193 FAEMVTRRALF 203
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 262
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 263 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 296
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 27 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 76
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 77 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 136
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 137 INTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 194
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 195 FAEMVTRRALF 205
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 210 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 264
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 265 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 298
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 30 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 79
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 80 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 139
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 140 INTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 197
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 198 FAEMVTRRALF 208
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 213 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 267
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 268 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 301
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 28 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 77
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 78 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLL 137
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 138 INTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 195
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 196 FAEMVTRRALF 206
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 211 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 265
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 266 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 299
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 29 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 78
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 79 KLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 138
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 139 INTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 196
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 197 FAEMVTRRALF 207
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 212 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 266
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 267 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 300
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 117/190 (61%), Gaps = 13/190 (6%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTENK 76
Query: 230 FYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L+
Sbjct: 77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136
Query: 289 NNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 137 NTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIF 194
Query: 349 GELFVKKPLF 358
E+ ++ LF
Sbjct: 195 AEMVTRRALF 204
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 263
Query: 71 LDKMLELDPERRITAEQALKSVWLKN 96
L +ML DP +RI+A+ AL + ++
Sbjct: 264 LSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 27 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 76
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 77 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLL 136
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 137 INTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 194
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 195 FAEMVTRRALF 205
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 210 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 264
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 265 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 298
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 28 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 77
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 78 KLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 137
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 138 INTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 195
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 196 FAEMVTRRALF 206
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 211 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 265
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 266 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 299
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 29 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 78
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 79 KLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLL 138
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 139 INTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 196
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 197 FAEMVTRRALF 207
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 212 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 266
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 267 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 300
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 169 FTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E+VALKK+RL+ E EG P TA+REI +L++LNH NIV L LD +
Sbjct: 27 LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL----------LDVIHTEN 76
Query: 229 SFYLVFEYMDHDLMGLLE-SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
YLVFE++ DL ++ S + S + QLL GL++CH LHRD+K N+L
Sbjct: 77 KLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLL 136
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+N G +KLADFGLAR + R Y ++V+TLWYR PE+LLG + Y A+D+WS GCI
Sbjct: 137 INTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 194
Query: 348 LGELFVKKPLF 358
E+ ++ LF
Sbjct: 195 FAEMVTRRALF 205
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFS-LMPPGALD---L 70
E+ QL I + GTP VWP V +P + PK R++FS ++PP D L
Sbjct: 210 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSL 264
Query: 71 LDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
L +ML DP +RI+A+ AL + ++V + P P L
Sbjct: 265 LSQMLHYDPNKRISAKAALAHPFFQDV---TKPVPHL 298
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 13/190 (6%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VALK+VRL+++ EG P +A+REI +L++L HKNIV L +++ DK
Sbjct: 26 THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL---------HSDK-K 75
Query: 230 FYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
LVFE+ D DL +S D + S + QLL GL +CH RN LHRD+K N+L+N
Sbjct: 76 LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN 135
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILG 349
GE+KLADFGLAR + R Y+ +V+TLWYRPP++L G + Y +ID+WS GCI
Sbjct: 136 RNGELKLADFGLARAFGIP--VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 193
Query: 350 ELF-VKKPLF 358
EL +PLF
Sbjct: 194 ELANAARPLF 203
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIH--RRRLREEFSLMPPGALDLLDKML 75
QL+ I +L GTPT WP++ KLP + KP ++ L + DLL +L
Sbjct: 211 QLKRIFRLLGTPTEEQWPSMTKLPDY---KPYPMYPATTSLVNVVPKLNATGRDLLQNLL 267
Query: 76 ELDPERRITAEQALKSVWLKNVHP 99
+ +P +RI+AE+AL+ + + P
Sbjct: 268 KCNPVQRISAEEALQHPYFSDFCP 291
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 120/186 (64%), Gaps = 12/186 (6%)
Query: 173 LVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYL 232
+VALK++RL+ E EG P TA+REI +L++L+H NIV+L +++ + L
Sbjct: 47 IVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER----------CLTL 96
Query: 233 VFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRG 292
VFE+M+ DL +L+ + + QLL G+++CH+ LHRD+K N+L+N+ G
Sbjct: 97 VFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDG 156
Query: 293 EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+KLADFGLAR + R YT++V+TLWYR P++L+G ++Y ++D+WS GCI E+
Sbjct: 157 ALKLADFGLARAFGIP--VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMI 214
Query: 353 VKKPLF 358
KPLF
Sbjct: 215 TGKPLF 220
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSLMPPG----ALDLLDK 73
QL I + GTP P WP V +LPLW ++ + ++ +S + PG +DLL
Sbjct: 228 QLPKIFSILGTPNPREWPQVQELPLWK----QRTFQVFEKKPWSSIIPGFCQEGIDLLSN 283
Query: 74 MLELDPERRITAEQALKSVWLKNVHPE 100
ML DP +RI+A A+ + K++ P+
Sbjct: 284 MLCFDPNKRISARDAMNHPYFKDLDPQ 310
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 120/186 (64%), Gaps = 12/186 (6%)
Query: 173 LVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYL 232
+VALK++RL+ E EG P TA+REI +L++L+H NIV+L +++ + L
Sbjct: 47 IVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER----------CLTL 96
Query: 233 VFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRG 292
VFE+M+ DL +L+ + + QLL G+++CH+ LHRD+K N+L+N+ G
Sbjct: 97 VFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDG 156
Query: 293 EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+KLADFGLAR + R YT++V+TLWYR P++L+G ++Y ++D+WS GCI E+
Sbjct: 157 ALKLADFGLARAFGIP--VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMI 214
Query: 353 VKKPLF 358
KPLF
Sbjct: 215 TGKPLF 220
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSLMPPG----ALDLLDK 73
QL I + GTP P WP V +LPLW ++ + ++ +S + PG +DLL
Sbjct: 228 QLPKIFSILGTPNPREWPQVQELPLWK----QRTFQVFEKKPWSSIIPGFCQEGIDLLSN 283
Query: 74 MLELDPERRITAEQALKSVWLKNVHPESM 102
ML DP +RI+A A+ + K++ P+ M
Sbjct: 284 MLCFDPNKRISARDAMNHPYFKDLDPQIM 312
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 164 bits (415), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 121/190 (63%), Gaps = 13/190 (6%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VALK+VRL+++ EG P +A+REI +L++L HKNIV L +++ DK
Sbjct: 26 THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL---------HSDK-K 75
Query: 230 FYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
LVFE+ D DL +S D + S + QLL GL +CH RN LHRD+K N+L+N
Sbjct: 76 LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN 135
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILG 349
GE+KLA+FGLAR + R Y+ +V+TLWYRPP++L G + Y +ID+WS GCI
Sbjct: 136 RNGELKLANFGLARAFGIP--VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 193
Query: 350 ELF-VKKPLF 358
EL +PLF
Sbjct: 194 ELANAGRPLF 203
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIH--RRRLREEFSLMPPGALDLLDKML 75
QL+ I +L GTPT WP++ KLP + KP ++ L + DLL +L
Sbjct: 211 QLKRIFRLLGTPTEEQWPSMTKLPDY---KPYPMYPATTSLVNVVPKLNATGRDLLQNLL 267
Query: 76 ELDPERRITAEQALKSVWLKNVHP 99
+ +P +RI+AE+AL+ + + P
Sbjct: 268 KCNPVQRISAEEALQHPYFSDFCP 291
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 134/221 (60%), Gaps = 18/221 (8%)
Query: 143 TNNSSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQL 202
+++S +E L G + ++ T VALK+V+L++E EG P TA+REI ++++L
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKEL 60
Query: 203 NHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFN----EVNNA 258
H+NIV L +++ + LVFE+MD+DL ++S V E+N
Sbjct: 61 KHENIVRLYDVI----------HTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLV 110
Query: 259 SIMR-QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNK 317
+ QLL GL++CH+ LHRD+K N+L+N RG++KL DFGLAR + ++++
Sbjct: 111 KYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP--VNTFSSE 168
Query: 318 VITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
V+TLWYR P++L+G Y +ID+WSCGCIL E+ KPLF
Sbjct: 169 VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLF 209
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 13/94 (13%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSLMPPGA--------LD 69
QL++I + GTP ++WP+V KLP ++ I +R R+ ++ P +D
Sbjct: 217 QLKLIFDIMGTPNESLWPSVTKLPKYN----PNIQQRPPRDLRQVLQPHTKEPLDGNLMD 272
Query: 70 LLDKMLELDPERRITAEQALKSVWL-KNVHPESM 102
L +L+L+P+ R++A+QAL W + H SM
Sbjct: 273 FLHGLLQLNPDMRLSAKQALHHPWFAEYYHHASM 306
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 135/235 (57%), Gaps = 20/235 (8%)
Query: 129 PMEMQAAAPIQSNSTNNSSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGF 188
P M +A + S + R + L G ++ T+E VA+K++RLE+E+EG
Sbjct: 19 PGSMSVSAAPSATSIDRYRR--ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGV 76
Query: 189 PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESG 248
P TA+RE+ +L++L H+NI+ L+ ++ +L+FEY ++DL ++
Sbjct: 77 PGTAIREVSLLKELQHRNIIELKSVI----------HHNHRLHLIFEYAENDLKKYMDKN 126
Query: 249 MVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE-----VKLADFGLAR 303
D + S + QL++G+++CH R LHRD+K N+L++ +K+ DFGLAR
Sbjct: 127 -PDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
Query: 304 LYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ RQ +T+++ITLWYRPPE+LLG Y ++D+WS CI E+ +K PLF
Sbjct: 186 AFGIPIRQ--FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLF 238
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSLMPPGALDLLDKM 74
E+ QL I ++ G P WP V LP W PK + R +L+ LDLL M
Sbjct: 243 EIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAM 302
Query: 75 LELDPERRITAEQALKSVWLKN 96
LE+DP +RI+A+ AL+ + +
Sbjct: 303 LEMDPVKRISAKNALEHPYFSH 324
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 16/191 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T +VA+KK ++ + A+REIK+L+QL H+N+VNL E+ K K
Sbjct: 49 TGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVC----------KKKKR 98
Query: 230 FYLVFEYMDHDLMGLLE--SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
+YLVFE++DH ++ LE +D+ V + Q+++G+ +CH N +HRDIK NIL
Sbjct: 99 WYLVFEFVDHTILDDLELFPNGLDYQVVQ--KYLFQIINGIGFCHSHNIIHRDIKPENIL 156
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
++ G VKL DFG AR A Y ++V T WYR PELL+G+ +YG A+DVW+ GC+
Sbjct: 157 VSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCL 214
Query: 348 LGELFVKKPLF 358
+ E+F+ +PLF
Sbjct: 215 VTEMFMGEPLF 225
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 117/193 (60%), Gaps = 19/193 (9%)
Query: 173 LVALKKVRLENEKEGFPITAVREIKILRQLN---HKNIVNLREIVTDKSDALDFRKDKGS 229
VALK+VR++ +EG P++ +RE+ +LR L H N+V L ++ T R D+ +
Sbjct: 39 FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS------RTDRET 92
Query: 230 -FYLVFEYMDHDLMGLLESGMVDFNEVNNASI---MRQLLDGLSYCHKRNFLHRDIKCSN 285
LVFE++D DL L+ V V +I M QLL GL + H +HRD+K N
Sbjct: 93 KLTLVFEHVDQDLTTYLDK--VPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN 150
Query: 286 ILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
IL+ + G++KLADFGLAR+Y+ Q T+ V+TLWYR PE+LL + Y +D+WS G
Sbjct: 151 ILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWYRAPEVLL-QSSYATPVDLWSVG 206
Query: 346 CILGELFVKKPLF 358
CI E+F +KPLF
Sbjct: 207 CIFAEMFRRKPLF 219
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 117/193 (60%), Gaps = 19/193 (9%)
Query: 173 LVALKKVRLENEKEGFPITAVREIKILRQLN---HKNIVNLREIVTDKSDALDFRKDKGS 229
VALK+VR++ +EG P++ +RE+ +LR L H N+V L ++ T R D+ +
Sbjct: 39 FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS------RTDRET 92
Query: 230 -FYLVFEYMDHDLMGLLESGMVDFNEVNNASI---MRQLLDGLSYCHKRNFLHRDIKCSN 285
LVFE++D DL L+ V V +I M QLL GL + H +HRD+K N
Sbjct: 93 KLTLVFEHVDQDLTTYLDK--VPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN 150
Query: 286 ILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
IL+ + G++KLADFGLAR+Y+ Q T+ V+TLWYR PE+LL + Y +D+WS G
Sbjct: 151 ILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWYRAPEVLL-QSSYATPVDLWSVG 206
Query: 346 CILGELFVKKPLF 358
CI E+F +KPLF
Sbjct: 207 CIFAEMFRRKPLF 219
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 117/193 (60%), Gaps = 19/193 (9%)
Query: 173 LVALKKVRLENEKEGFPITAVREIKILRQLN---HKNIVNLREIVTDKSDALDFRKDKGS 229
VALK+VR++ +EG P++ +RE+ +LR L H N+V L ++ T R D+ +
Sbjct: 39 FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS------RTDRET 92
Query: 230 -FYLVFEYMDHDLMGLLESGMVDFNEVNNASI---MRQLLDGLSYCHKRNFLHRDIKCSN 285
LVFE++D DL L+ V V +I M QLL GL + H +HRD+K N
Sbjct: 93 KLTLVFEHVDQDLTTYLDK--VPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN 150
Query: 286 ILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
IL+ + G++KLADFGLAR+Y+ Q T+ V+TLWYR PE+LL + Y +D+WS G
Sbjct: 151 ILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWYRAPEVLL-QSSYATPVDLWSVG 206
Query: 346 CILGELFVKKPLF 358
CI E+F +KPLF
Sbjct: 207 CIFAEMFRRKPLF 219
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 116/194 (59%), Gaps = 15/194 (7%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLN---HKNIVNLREI-VTDKSDALDFRK 225
+ VALK VR+ N +EG PI+ VRE+ +LR+L H N+V L ++ T ++D R+
Sbjct: 28 SGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTD----RE 83
Query: 226 DKGSFYLVFEYMDHDLMGLLESGMV-DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
K + LVFE++D DL L+ +MRQ L GL + H +HRD+K
Sbjct: 84 IKVT--LVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 141
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
NIL+ + G VKLADFGLAR+Y+ + P V+TLWYR PE+LL + Y +D+WS
Sbjct: 142 NILVTSGGTVKLADFGLARIYSYQMALAPV---VVTLWYRAPEVLL-QSTYATPVDMWSV 197
Query: 345 GCILGELFVKKPLF 358
GCI E+F +KPLF
Sbjct: 198 GCIFAEMFRRKPLF 211
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 12 ANIELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSLMPPGALDLL 71
N E QL I L G P WP + LP P+ R ++ M LL
Sbjct: 213 GNSEADQLGKIFDLIGLPPEDDWPRDVSLPRG-AFPPRG--PRPVQSVVPEMEESGAQLL 269
Query: 72 DKMLELDPERRITAEQALKSVWL 94
+ML +P +RI+A +AL+ +L
Sbjct: 270 LEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 116/194 (59%), Gaps = 15/194 (7%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLN---HKNIVNLREI-VTDKSDALDFRK 225
+ VALK VR+ N +EG PI+ VRE+ +LR+L H N+V L ++ T ++D R+
Sbjct: 28 SGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTD----RE 83
Query: 226 DKGSFYLVFEYMDHDLMGLLESGMV-DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
K + LVFE++D DL L+ +MRQ L GL + H +HRD+K
Sbjct: 84 IKVT--LVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 141
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
NIL+ + G VKLADFGLAR+Y+ + P V+TLWYR PE+LL + Y +D+WS
Sbjct: 142 NILVTSGGTVKLADFGLARIYSYQMALDPV---VVTLWYRAPEVLL-QSTYATPVDMWSV 197
Query: 345 GCILGELFVKKPLF 358
GCI E+F +KPLF
Sbjct: 198 GCIFAEMFRRKPLF 211
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 12 ANIELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSLMPPGALDLL 71
N E QL I L G P WP + LP P+ R ++ M LL
Sbjct: 213 GNSEADQLGKIFDLIGLPPEDDWPRDVSLPRG-AFPPRG--PRPVQSVVPEMEESGAQLL 269
Query: 72 DKMLELDPERRITAEQALKSVWL 94
+ML +P +RI+A +AL+ +L
Sbjct: 270 LEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 116/194 (59%), Gaps = 15/194 (7%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLN---HKNIVNLREI-VTDKSDALDFRK 225
+ VALK VR+ N +EG PI+ VRE+ +LR+L H N+V L ++ T ++D R+
Sbjct: 28 SGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTD----RE 83
Query: 226 DKGSFYLVFEYMDHDLMGLLESGMV-DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
K + LVFE++D DL L+ +MRQ L GL + H +HRD+K
Sbjct: 84 IKVT--LVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 141
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
NIL+ + G VKLADFGLAR+Y+ + P V+TLWYR PE+LL + Y +D+WS
Sbjct: 142 NILVTSGGTVKLADFGLARIYSYQMALFPV---VVTLWYRAPEVLL-QSTYATPVDMWSV 197
Query: 345 GCILGELFVKKPLF 358
GCI E+F +KPLF
Sbjct: 198 GCIFAEMFRRKPLF 211
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 12 ANIELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSLMPPGALDLL 71
N E QL I L G P WP + LP P+ R ++ M LL
Sbjct: 213 GNSEADQLGKIFDLIGLPPEDDWPRDVSLPRG-AFPPRG--PRPVQSVVPEMEESGAQLL 269
Query: 72 DKMLELDPERRITAEQALKSVWL 94
+ML +P +RI+A +AL+ +L
Sbjct: 270 LEMLTFNPHKRISAFRALQHSYL 292
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 116/192 (60%), Gaps = 15/192 (7%)
Query: 170 TDELVALKKVRL---ENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKD 226
T+++VA+KK++L K+G TA+REIK+L++L+H NI+ L LD
Sbjct: 34 TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL----------LDAFGH 83
Query: 227 KGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
K + LVF++M+ DL +++ + + + M L GL Y H+ LHRD+K +N+
Sbjct: 84 KSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNL 143
Query: 287 LMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
L++ G +KLADFGLA+ + + +R Y ++V+T WYR PELL G YG +D+W+ GC
Sbjct: 144 LLDENGVLKLADFGLAKSFGSPNRA--YXHQVVTRWYRAPELLFGARMYGVGVDMWAVGC 201
Query: 347 ILGELFVKKPLF 358
IL EL ++ P
Sbjct: 202 ILAELLLRVPFL 213
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Query: 15 ELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSLMPPGALDLLDKM 74
+L QL I + GTPT WP + LP + T K L FS LDL+ +
Sbjct: 218 DLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK--SFPGIPLHHIFSAAGDDLLDLIQGL 275
Query: 75 LELDPERRITAEQALKSVWLKNVHPESMPPPQLP 108
+P RITA QALK + N P P QLP
Sbjct: 276 FLFNPCARITATQALKMKYFSN-RPGPTPGCQLP 308
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 107/189 (56%), Gaps = 12/189 (6%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T ++VA+KK + A+REI++L+QL H N+VNL E+ FR+ K
Sbjct: 27 TGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV---------FRR-KRR 76
Query: 230 FYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
+LVFEY DH ++ L+ E SI Q L +++CHK N +HRD+K NIL+
Sbjct: 77 LHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT 136
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILG 349
+KL DFG ARL Y ++V T WYR PELL+G+ +YGP +DVW+ GC+
Sbjct: 137 KHSVIKLCDFGFARLLTGPSDY--YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFA 194
Query: 350 ELFVKKPLF 358
EL PL+
Sbjct: 195 ELLSGVPLW 203
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNV 97
AL LL L +DP R+T EQ L + +N+
Sbjct: 261 ALGLLKGCLHMDPTERLTCEQLLHHPYFENI 291
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 121/214 (56%), Gaps = 10/214 (4%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++PL GG L +V D+ VA+KK+ L + + A+REIKI+R+L+H NIV +
Sbjct: 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQS--VKHALREIKIIRRLDHDNIVKV 73
Query: 211 REIV----TDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLD 266
EI+ + +D + + S Y+V EYM+ DL +LE G E + M QLL
Sbjct: 74 FEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG--PLLEEHARLFMYQLLR 131
Query: 267 GLSYCHKRNFLHRDIKCSNILMNNRGEV-KLADFGLARLYNAEDRQRPYTNK-VITLWYR 324
GL Y H N LHRD+K +N+ +N V K+ DFGLAR+ + + + ++ ++T WYR
Sbjct: 132 GLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYR 191
Query: 325 PPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
P LLL Y AID+W+ GCI E+ K LF
Sbjct: 192 SPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF 225
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 114/197 (57%), Gaps = 18/197 (9%)
Query: 170 TDELVALKKVRLENEKEG---FPITAVREIKILRQLN---HKNIVNLREI-VTDKSDALD 222
+ VALK VR+ N G PI+ VRE+ +LR+L H N+V L ++ T ++D
Sbjct: 33 SGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTD--- 89
Query: 223 FRKDKGSFYLVFEYMDHDLMGLLESGMV-DFNEVNNASIMRQLLDGLSYCHKRNFLHRDI 281
R+ K + LVFE++D DL L+ +MRQ L GL + H +HRD+
Sbjct: 90 -REIKVT--LVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDL 146
Query: 282 KCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDV 341
K NIL+ + G VKLADFGLAR+Y+ Q T V+TLWYR PE+LL + Y +D+
Sbjct: 147 KPENILVTSGGTVKLADFGLARIYS---YQMALTPVVVTLWYRAPEVLL-QSTYATPVDM 202
Query: 342 WSCGCILGELFVKKPLF 358
WS GCI E+F +KPLF
Sbjct: 203 WSVGCIFAEMFRRKPLF 219
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 12 ANIELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSLMPPGALDLL 71
N E QL I L G P WP + LP P+ R ++ M LL
Sbjct: 221 GNSEADQLGKIFDLIGLPPEDDWPRDVSLPRG-AFPPRG--PRPVQSVVPEMEESGAQLL 277
Query: 72 DKMLELDPERRITAEQALKSVWL 94
+ML +P +RI+A +AL+ +L
Sbjct: 278 LEMLTFNPHKRISAFRALQHSYL 300
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 121/229 (52%), Gaps = 30/229 (13%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLN-HKNIV 208
L++ L G + S+ T E+VA+KK+ + REI IL +L+ H+NIV
Sbjct: 13 LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIV 72
Query: 209 NLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGL 268
NL ++ +D YLVF+YM+ DL ++ + +++ V+ ++ QL+ +
Sbjct: 73 NLLNVLRADNDR--------DVYLVFDYMETDLHAVIRANILE--PVHKQYVVYQLIKVI 122
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLY-------------------NAED 309
Y H LHRD+K SNIL+N VK+ADFGL+R + N +D
Sbjct: 123 KYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDD 182
Query: 310 RQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
Q T+ V T WYR PE+LLG +Y ID+WS GCILGE+ KP+F
Sbjct: 183 DQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDK+L+ +P +RI+A ALK ++ H + P
Sbjct: 305 ALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEP 342
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 114/197 (57%), Gaps = 16/197 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+KK+ +K F + +REIKIL+ H+NI+ + I + D+ + +
Sbjct: 35 TGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHENIITIFNI--QRPDSFE---NFNE 88
Query: 230 FYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
Y++ E M DL ++ + M+ + + + Q L + H N +HRD+K SN+L+N
Sbjct: 89 VYIIQELMQTDLHRVISTQMLSDDHIQ--YFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN 146
Query: 290 NRGEVKLADFGLARLYN--AEDRQRP------YTNKVITLWYRPPELLLGEERYGPAIDV 341
+ ++K+ DFGLAR+ + A D P T V T WYR PE++L +Y A+DV
Sbjct: 147 SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDV 206
Query: 342 WSCGCILGELFVKKPLF 358
WSCGCIL ELF+++P+F
Sbjct: 207 WSCGCILAELFLRRPIF 223
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 24/124 (19%)
Query: 18 QLEVISKLCGTP----------TPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSLMPPGA 67
QL +I + GTP +P + LP++ +K+ F + P
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKM--------FPRVNPKG 282
Query: 68 LDLLDKMLELDPERRITAEQALKSVWLKNVH-----PESMP-PPQLPTWQDCHELWSKKR 121
+DLL +ML DP +RITA++AL+ +L+ H PE P PP + E + K
Sbjct: 283 IDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKD 342
Query: 122 RRQL 125
++L
Sbjct: 343 LKKL 346
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 114/197 (57%), Gaps = 16/197 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+KK+ +K F + +REIKIL+ H+NI+ + I + D+ + +
Sbjct: 35 TGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHENIITIFNI--QRPDSFE---NFNE 88
Query: 230 FYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
Y++ E M DL ++ + M+ + + + Q L + H N +HRD+K SN+L+N
Sbjct: 89 VYIIQELMQTDLHRVISTQMLSDDHIQ--YFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN 146
Query: 290 NRGEVKLADFGLARLYN--AEDRQRP------YTNKVITLWYRPPELLLGEERYGPAIDV 341
+ ++K+ DFGLAR+ + A D P T V T WYR PE++L +Y A+DV
Sbjct: 147 SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDV 206
Query: 342 WSCGCILGELFVKKPLF 358
WSCGCIL ELF+++P+F
Sbjct: 207 WSCGCILAELFLRRPIF 223
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 24/124 (19%)
Query: 18 QLEVISKLCGTP----------TPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSLMPPGA 67
QL +I + GTP +P + LP++ +K+ F + P
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKM--------FPRVNPKG 282
Query: 68 LDLLDKMLELDPERRITAEQALKSVWLKNVH-----PESMP-PPQLPTWQDCHELWSKKR 121
+DLL +ML DP +RITA++AL+ +L+ H PE P PP + E + K
Sbjct: 283 IDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKD 342
Query: 122 RRQL 125
++L
Sbjct: 343 LKKL 346
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 112/186 (60%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REI+IL + H+N++ +R+I+ ++ L+ +D Y+V
Sbjct: 71 VAIKKIS-PFEHQTYCQRTLREIQILLRFRHENVIGIRDIL--RASTLEAMRD---VYIV 124
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL+S + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 125 QDLMETDLYKLLKSQQLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCD 182
Query: 294 VKLADFGLARLYNAE-DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + E D T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 183 LKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
Query: 353 VKKPLF 358
+P+F
Sbjct: 243 SNRPIF 248
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVH-PESMPPPQLP 108
ALDLLD+ML +P +RIT E+AL +L+ + P P + P
Sbjct: 306 ALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPVAEEP 348
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 106/189 (56%), Gaps = 12/189 (6%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
+ E VA+KK+ + E F A RE+ +L+ + H+N++ L ++ T S +F
Sbjct: 66 SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY----D 121
Query: 230 FYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
FYLV +M DL ++ GM +F+E ++ Q+L GL Y H +HRD+K N+ +N
Sbjct: 122 FYLVMPFMQTDLQKIM--GM-EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN 178
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILG 349
E+K+ DFGLAR +AE T V+T WYR PE++L Y +D+WS GCI+
Sbjct: 179 EDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMA 233
Query: 350 ELFVKKPLF 358
E+ K LF
Sbjct: 234 EMLTGKTLF 242
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 53 RRRLREEFSLMPPGALDLLDKMLELDPERRITAEQAL 89
R+ + F P A DLL+KMLELD ++R+TA QAL
Sbjct: 286 RKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQAL 322
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 16/197 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+KK+ +K F + +REIKIL+ H+NI+ + I + D+ + +
Sbjct: 35 TGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHENIITIFNI--QRPDSFE---NFNE 88
Query: 230 FYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
Y++ E M DL ++ + M+ + + + Q L + H N +HRD+K SN+L+N
Sbjct: 89 VYIIQELMQTDLHRVISTQMLSDDHIQ--YFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN 146
Query: 290 NRGEVKLADFGLARLYN--AEDRQRPYTNK------VITLWYRPPELLLGEERYGPAIDV 341
+ ++K+ DFGLAR+ + A D P + V T WYR PE++L +Y A+DV
Sbjct: 147 SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDV 206
Query: 342 WSCGCILGELFVKKPLF 358
WSCGCIL ELF+++P+F
Sbjct: 207 WSCGCILAELFLRRPIF 223
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 24/124 (19%)
Query: 18 QLEVISKLCGTP----------TPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSLMPPGA 67
QL +I + GTP +P + LP++ +K+ F + P
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKM--------FPRVNPKG 282
Query: 68 LDLLDKMLELDPERRITAEQALKSVWLKNVH-----PESMP-PPQLPTWQDCHELWSKKR 121
+DLL +ML DP +RITA++AL+ +L+ H PE P PP + E + K
Sbjct: 283 IDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKD 342
Query: 122 RRQL 125
++L
Sbjct: 343 LKKL 346
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 115/204 (56%), Gaps = 39/204 (19%)
Query: 175 ALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
ALK++ E G ++A REI +LR+L H N+++L+++ +D RK +L+F
Sbjct: 52 ALKQI----EGTGISMSACREIALLRELKHPNVISLQKVFLSHAD----RK----VWLLF 99
Query: 235 EYMDHDLMGLLESGMVDFNEVNNA-------------SIMRQLLDGLSYCHKRNFLHRDI 281
+Y +HDL +++ F+ + A S++ Q+LDG+ Y H LHRD+
Sbjct: 100 DYAEHDLWHIIK-----FHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDL 154
Query: 282 KCSNILMNN----RGEVKLADFGLARLYNAEDRQRPYTN---KVITLWYRPPELLLGEER 334
K +NIL+ RG VK+AD G ARL+N+ +P + V+T WYR PELLLG
Sbjct: 155 KPANILVMGEGPERGRVKIADMGFARLFNSP--LKPLADLDPVVVTFWYRAPELLLGARH 212
Query: 335 YGPAIDVWSCGCILGELFVKKPLF 358
Y AID+W+ GCI EL +P+F
Sbjct: 213 YTKAIDIWAIGCIFAELLTSEPIF 236
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 12/87 (13%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSLMP----------PGA 67
QL+ I + G P W + K+P T+ K RR SL+ A
Sbjct: 253 QLDRIFNVMGFPADKDWEDIKKMPEHSTLM--KDFRRNTYTNCSLIKYMEKHKVKPDSKA 310
Query: 68 LDLLDKMLELDPERRITAEQALKSVWL 94
LL K+L +DP +RIT+EQA++ +
Sbjct: 311 FHLLQKLLTMDPIKRITSEQAMQDPYF 337
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 12/189 (6%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
+ E VA+KK+ + E F A RE+ +L+ + H+N++ L ++ T S +F
Sbjct: 48 SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY----D 103
Query: 230 FYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
FYLV +M DL ++ + F+E ++ Q+L GL Y H +HRD+K N+ +N
Sbjct: 104 FYLVMPFMQTDLQKIMG---LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN 160
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILG 349
E+K+ DFGLAR +AE T V+T WYR PE++L Y +D+WS GCI+
Sbjct: 161 EDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMA 215
Query: 350 ELFVKKPLF 358
E+ K LF
Sbjct: 216 EMLTGKTLF 224
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 53 RRRLREEFSLMPPGALDLLDKMLELDPERRITAEQAL 89
R+ + F P A DLL+KMLELD ++R+TA QAL
Sbjct: 268 RKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQAL 304
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 111/208 (53%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G +V T VA+KK+ + E F A RE+++L+ + H+N++ L
Sbjct: 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGL 89
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T DF FYLV +M DL L++ + + + ++ Q+L GL Y
Sbjct: 90 LDVFTPDETLDDFT----DFYLVMPFMGTDLGKLMKHEKLGEDRIQ--FLVYQMLKGLRY 143
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K N+ +N E+K+ DFGLAR ++E V+T WYR PE++L
Sbjct: 144 IHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE-----MXGXVVTRWYRAPEVIL 198
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
RY +D+WS GCI+ E+ K LF
Sbjct: 199 NWMRYTQTVDIWSVGCIMAEMITGKTLF 226
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 65 PGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQLPTWQDCHE 115
P A++LL+KML LD E+R+TA +AL + +++H ++ PQ+ + D +
Sbjct: 282 PLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH-DTEDEPQVQKYDDSFD 331
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 55 VAIKKIS-PFEHQTYXQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 108
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 109 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD 166
Query: 294 VKLADFGLARLYNAE-DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + D T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 353 VKKPLF 358
+P+F
Sbjct: 227 SNRPIF 232
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 290 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 327
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 110/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 53 VAIKKIS-PFEHQTYCQRTLREIKILLAFRHENIIGINDII--RAPTIEQMKD---VYIV 106
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 107 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSD 164
Query: 294 VKLADFGLARLYNAE-DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + D T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 353 VKKPLF 358
+P+F
Sbjct: 225 SNRPIF 230
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 23/38 (60%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L + S P
Sbjct: 288 ALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDEP 325
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 51 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 104
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 105 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD 162
Query: 294 VKLADFGLARLYNAE-DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + D T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 353 VKKPLF 358
+P+F
Sbjct: 223 SNRPIF 228
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 286 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 323
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 51 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 104
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 105 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD 162
Query: 294 VKLADFGLARLYNAEDRQRPY-TNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + + T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 353 VKKPLF 358
+P+F
Sbjct: 223 SNRPIF 228
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 286 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 323
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 51 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 104
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 105 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD 162
Query: 294 VKLADFGLARLYNAE-DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + D T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 163 LKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 353 VKKPLF 358
+P+F
Sbjct: 223 SNRPIF 228
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 286 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 323
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 53 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 106
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 107 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 164
Query: 294 VKLADFGLARLYNAE-DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + D T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 353 VKKPLF 358
+P+F
Sbjct: 225 SNRPIF 230
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 288 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 325
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 55 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 108
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 109 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD 166
Query: 294 VKLADFGLARLYNAE-DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + D T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 353 VKKPLF 358
+P+F
Sbjct: 227 SNRPIF 232
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 290 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 327
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 51 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 104
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 105 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 162
Query: 294 VKLADFGLARLYNAE-DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + D T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 353 VKKPLF 358
+P+F
Sbjct: 223 SNRPIF 228
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 286 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 323
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 71 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 124
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 125 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 182
Query: 294 VKLADFGLARLYNAEDRQRPY-TNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + + T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 183 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
Query: 353 VKKPLF 358
+P+F
Sbjct: 243 SNRPIF 248
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 306 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 343
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 109/186 (58%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD YLV
Sbjct: 71 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYLV 124
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
M DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 125 THLMGADLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD 182
Query: 294 VKLADFGLARLYNAE-DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + D T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 183 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
Query: 353 VKKPLF 358
+P+F
Sbjct: 243 SNRPIF 248
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 306 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 343
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 56 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 109
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 110 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 167
Query: 294 VKLADFGLARLYNAE-DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + D T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 168 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 227
Query: 353 VKKPLF 358
+P+F
Sbjct: 228 SNRPIF 233
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 291 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 328
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 57 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 110
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 111 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 168
Query: 294 VKLADFGLARLYNAE-DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + D T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 169 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 228
Query: 353 VKKPLF 358
+P+F
Sbjct: 229 SNRPIF 234
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 292 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 329
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 48 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 101
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 102 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 159
Query: 294 VKLADFGLARLYNAE-DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + D T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 160 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 219
Query: 353 VKKPLF 358
+P+F
Sbjct: 220 SNRPIF 225
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 283 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 320
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 55 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 108
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 109 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 166
Query: 294 VKLADFGLARLYNAE-DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + D T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 353 VKKPLF 358
+P+F
Sbjct: 227 SNRPIF 232
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 290 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 327
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 49 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 102
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 103 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 160
Query: 294 VKLADFGLARLYNAE-DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + D T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 161 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 220
Query: 353 VKKPLF 358
+P+F
Sbjct: 221 SNRPIF 226
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 284 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 321
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 59 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 112
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 113 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 170
Query: 294 VKLADFGLARLYNAE-DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + D T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 171 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 230
Query: 353 VKKPLF 358
+P+F
Sbjct: 231 SNRPIF 236
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 294 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 331
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 51 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 104
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 105 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 162
Query: 294 VKLADFGLARLYNAE-DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + D T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 353 VKKPLF 358
+P+F
Sbjct: 223 SNRPIF 228
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 286 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 323
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 110/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 53 VAIKKIS-PFEHQTYCQRTLREIKILLAFRHENIIGINDII--RAPTIEQMKD---VYIV 106
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 107 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 164
Query: 294 VKLADFGLARLYNAE-DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + D T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 353 VKKPLF 358
+P+F
Sbjct: 225 SNRPIF 230
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 23/38 (60%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L + S P
Sbjct: 288 ALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDEP 325
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 49 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 102
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 103 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 160
Query: 294 VKLADFGLARLYNAEDRQRPY-TNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + + T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 161 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 220
Query: 353 VKKPLF 358
+P+F
Sbjct: 221 SNRPIF 226
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 284 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 321
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 111/212 (52%), Gaps = 9/212 (4%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
++E + G + + + T + VA+KK+ + +RE+KIL+ H NI+
Sbjct: 59 IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIA 118
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGM-VDFNEVNNASIMRQLLDGL 268
+++I+ +F+ S Y+V + M+ DL ++ S + V + QLL GL
Sbjct: 119 IKDILRPTVPYGEFK----SVYVVLDLMESDLHQIIHSSQPLTLEHVRY--FLYQLLRGL 172
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY--TNKVITLWYRPP 326
Y H +HRD+K SN+L+N E+K+ DFG+AR + Y T V T WYR P
Sbjct: 173 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 232
Query: 327 ELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
EL+L Y AID+WS GCI GE+ ++ LF
Sbjct: 233 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 264
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 34/107 (31%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSLMPP------------ 65
QL++I + GTP+PAV AV R+R +PP
Sbjct: 272 QLQLIMMVLGTPSPAVIQAV--------------GAERVRAYIQSLPPRQPVPWETVYPG 317
Query: 66 ---GALDLLDKMLELDPERRITAEQALKSVWLKNVH-----PESMPP 104
AL LL +ML +P RI+A AL+ +L H P+ PP
Sbjct: 318 ADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEPDCAPP 364
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 111/212 (52%), Gaps = 9/212 (4%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
++E + G + + + T + VA+KK+ + +RE+KIL+ H NI+
Sbjct: 58 IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIA 117
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGM-VDFNEVNNASIMRQLLDGL 268
+++I+ +F+ S Y+V + M+ DL ++ S + V + QLL GL
Sbjct: 118 IKDILRPTVPYGEFK----SVYVVLDLMESDLHQIIHSSQPLTLEHVRY--FLYQLLRGL 171
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY--TNKVITLWYRPP 326
Y H +HRD+K SN+L+N E+K+ DFG+AR + Y T V T WYR P
Sbjct: 172 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 231
Query: 327 ELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
EL+L Y AID+WS GCI GE+ ++ LF
Sbjct: 232 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 263
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 34/107 (31%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSLMPP------------ 65
QL++I + GTP+PAV AV R+R +PP
Sbjct: 271 QLQLIMMVLGTPSPAVIQAV--------------GAERVRAYIQSLPPRQPVPWETVYPG 316
Query: 66 ---GALDLLDKMLELDPERRITAEQALKSVWLKNVH-----PESMPP 104
AL LL +ML +P RI+A AL+ +L H P+ PP
Sbjct: 317 ADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEPDCAPP 363
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 110/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 55 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 108
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL+ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 109 QDLMETDLYKLLKCQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 166
Query: 294 VKLADFGLARLYNAE-DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + D T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 353 VKKPLF 358
+P+F
Sbjct: 227 SNRPIF 232
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 290 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 327
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA++K+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 55 VAIRKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 108
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 109 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 166
Query: 294 VKLADFGLARLYNAE-DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + D T V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 353 VKKPLF 358
+P+F
Sbjct: 227 SNRPIF 232
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 290 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 327
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 55 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 108
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 109 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 166
Query: 294 VKLADFGLARLYNAEDRQRPYTNK-VITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + + + V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 167 LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 353 VKKPLF 358
+P+F
Sbjct: 227 SNRPIF 232
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 290 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 327
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KK+ E + + +REIKIL + H+NI+ + +I+ ++ ++ KD Y+V
Sbjct: 56 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDII--RAPTIEQMKD---VYIV 109
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
+ M+ DL LL++ + + + + Q+L GL Y H N LHRD+K SN+L+N +
Sbjct: 110 QDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 167
Query: 294 VKLADFGLARLYNAEDRQRPYTNK-VITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+K+ DFGLAR+ + + + + V T WYR PE++L + Y +ID+WS GCIL E+
Sbjct: 168 LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 227
Query: 353 VKKPLF 358
+P+F
Sbjct: 228 SNRPIF 233
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
ALDLLDKML +P +RI EQAL +L+ + S P
Sbjct: 291 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 328
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + D VA+KK+ + + A RE+ +++ +NHKNI++L
Sbjct: 29 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ YLV E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 89 LNVFTPQKTLEEFQ----DVYLVMELMDANLXQVIQ---MELDHERMSYLLYQMLXGIKH 141
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 198
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ K LF
Sbjct: 199 G-MGYKENVDIWSVGCIMGEMVRHKILF 225
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQL 107
E L A DLL KML +DP +RI+ + AL+ +VW E+ PPPQ+
Sbjct: 285 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEA-PPPQI 337
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + D VA+KK+ + + A RE+ +++ +NHKNI++L
Sbjct: 22 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 81
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ YLV E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 82 LNVFTPQKTLEEFQ----DVYLVMELMDANLXQVIQ---MELDHERMSYLLYQMLXGIKH 134
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 191
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ K LF
Sbjct: 192 G-MGYKENVDIWSVGCIMGEMVRHKILF 218
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQL 107
E L A DLL KML +DP +RI+ + AL+ +VW E+ PPPQ+
Sbjct: 278 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEA-PPPQI 330
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + D VA+KK+ + + A RE+ +++ +NHKNI++L
Sbjct: 29 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ YLV E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 89 LNVFTPQKTLEEFQ----DVYLVMELMDANLXQVIQ---MELDHERMSYLLYQMLCGIKH 141
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 198
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ K LF
Sbjct: 199 GMG-YKENVDIWSVGCIMGEMVRHKILF 225
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWL 94
E L A DLL KML +DP +RI+ + AL+ ++
Sbjct: 285 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + D VA+KK+ + + A RE+ +++ +NHKNI++L
Sbjct: 29 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ YLV E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 89 LNVFTPQKTLEEFQ----DVYLVMELMDANLXQVIQ---MELDHERMSYLLYQMLXGIKH 141
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 198
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ K LF
Sbjct: 199 G-MGYKENVDIWSVGCIMGEMVRHKILF 225
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQL 107
E L A DLL KML +DP +RI+ + AL+ +VW E+ PPPQ+
Sbjct: 285 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEA-PPPQI 337
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 91/165 (55%), Gaps = 11/165 (6%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFN 253
RE+++L+ L H+N++ L ++ T + DF + YLV M DL +++S +
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSE----VYLVTTLMGADLNNIVKSQALSDE 131
Query: 254 EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRP 313
V ++ QLL GL Y H +HRD+K SN+ +N E+++ DFGLAR + E
Sbjct: 132 HVQ--FLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----- 184
Query: 314 YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
T V T WYR PE++L Y +D+WS GCI+ EL K LF
Sbjct: 185 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL+ I ++ GTP+P V + I+ + ++ L F P A+DLL +ML
Sbjct: 237 QLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLV 296
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++R++A +AL + H PE P
Sbjct: 297 LDSDQRVSAAEALAHAYFSQYHDPEDEP 324
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + D VA+KK+ + + A RE+ +++ +NHKNI++L
Sbjct: 29 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ YLV E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 89 LNVFTPQKTLEEFQ----DVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 141
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 198
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ K LF
Sbjct: 199 GMG-YKENVDIWSVGCIMGEMVRHKILF 225
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWL 94
E L A DLL KML +DP +RI+ + AL+ ++
Sbjct: 285 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + D VA+KK+ + + A RE+ +++ +NHKNI++L
Sbjct: 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 126
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ YLV E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 127 LNVFTPQKTLEEFQ----DVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 179
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 236
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ K LF
Sbjct: 237 G-MGYKENVDIWSVGCIMGEMVRHKILF 263
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQL 107
E L A DLL KML +DP +RI+ + AL+ +VW E+ PPPQ+
Sbjct: 323 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEA-PPPQI 375
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + D VA+KK+ + + A RE+ +++ +NHKNI++L
Sbjct: 30 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 89
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ YLV E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 90 LNVFTPQKTLEEFQ----DVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 142
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 199
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ K LF
Sbjct: 200 G-MGYKENVDIWSVGCIMGEMVRHKILF 226
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQL 107
E L A DLL KML +DP +RI+ + AL+ +VW E+ PPPQ+
Sbjct: 286 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEA-PPPQI 338
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + D VA+KK+ + + A RE+ +++ +NHKNI++L
Sbjct: 30 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 89
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ YLV E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 90 LNVFTPQKTLEEFQ----DVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 142
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 199
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ K LF
Sbjct: 200 G-MGYKENVDIWSVGCIMGEMVRHKILF 226
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQL 107
E L A DLL KML +DP +RI+ + AL+ +VW E+ PPPQ+
Sbjct: 286 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEA-PPPQI 338
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + D VA+KK+ + + A RE+ +++ +NHKNI++L
Sbjct: 28 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 87
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ YLV E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 88 LNVFTPQKTLEEFQ----DVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 141 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 197
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ K LF
Sbjct: 198 G-MGYKENVDIWSVGCIMGEMVRHKILF 224
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQL 107
E L A DLL KML +DP +RI+ + AL+ +VW E+ PPPQ+
Sbjct: 284 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEA-PPPQI 336
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + D VA+KK+ + + A RE+ +++ +NHKNI++L
Sbjct: 29 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ YLV E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 89 LNVFTPQKTLEEFQ----DVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 141
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 198
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ K LF
Sbjct: 199 G-MGYKENVDIWSVGCIMGEMVRHKILF 225
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQL 107
E L A DLL KML +DP +RI+ + AL+ +VW E+ PPPQ+
Sbjct: 285 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEA-PPPQI 337
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + D VA+KK+ + + A RE+ +++ +NHKNI++L
Sbjct: 29 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ YLV E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 89 LNVFTPQKTLEEFQ----DVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 141
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 198
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ K LF
Sbjct: 199 G-MGYKENVDIWSVGCIMGEMVRHKILF 225
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQL 107
E L A DLL KML +DP +RI+ + AL+ +VW E+ PPPQ+
Sbjct: 285 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEA-PPPQI 337
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + D VA+KK+ + + A RE+ +++ +NHKNI++L
Sbjct: 23 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 82
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ YLV E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 83 LNVFTPQKTLEEFQ----DVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 135
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 192
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ K LF
Sbjct: 193 G-MGYKENVDIWSVGCIMGEMVRHKILF 219
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQL 107
E L A DLL KML +DP +RI+ + AL+ +VW E+ PPPQ+
Sbjct: 279 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEA-PPPQI 331
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + D VA+KK+ + + A RE+ +++ +NHKNI++L
Sbjct: 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 126
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ YLV E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 127 LNVFTPQKTLEEFQ----DVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 179
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 236
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ K LF
Sbjct: 237 G-MGYKENVDIWSVGCIMGEMVRHKILF 263
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQL 107
E L A DLL KML +DP +RI+ + AL+ +VW E+ PPPQ+
Sbjct: 323 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEA-PPPQI 375
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + D VA+KK+ + + A RE+ +++ +NHKNI++L
Sbjct: 22 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 81
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ YLV E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 82 LNVFTPQKTLEEFQ----DVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 134
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 191
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ K LF
Sbjct: 192 G-MGYKENVDIWSVGCIMGEMVRHKILF 218
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQL 107
E L A DLL KML +DP +RI+ + AL+ +VW E+ PPPQ+
Sbjct: 278 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEA-PPPQI 330
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + D VA+KK+ + + A RE+ +++ +NHKNI++L
Sbjct: 23 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 82
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ YLV E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 83 LNVFTPQKTLEEFQ----DVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 135
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 192
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ K LF
Sbjct: 193 G-MGYKENVDIWSVGCIMGEMVRHKILF 219
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQL 107
E L A DLL KML +DP +RI+ + AL+ +VW E+ PPPQ+
Sbjct: 279 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEA-PPPQI 331
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 90/165 (54%), Gaps = 11/165 (6%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFN 253
RE+++L+ L H+N++ L ++ T + DF + YLV M DL +++ +
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSE----VYLVTTLMGADLNNIVKCQALSDE 131
Query: 254 EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRP 313
V ++ QLL GL Y H +HRD+K SN+ +N E+++ DFGLAR + E
Sbjct: 132 HVQ--FLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----- 184
Query: 314 YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
T V T WYR PE++L Y +D+WS GCI+ EL K LF
Sbjct: 185 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL+ I ++ GTP+P V + I+ + ++ L F P A+DLL +ML
Sbjct: 237 QLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLV 296
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++R++A +AL + H PE P
Sbjct: 297 LDSDQRVSAAEALAHAYFSQYHDPEDEP 324
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 113/208 (54%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + + VA+KK+ + + A RE+ +++ +NHKNI+ L
Sbjct: 34 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 93
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ Y+V E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 94 LNVFTPQKSLEEFQ----DVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 146
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 147 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 203
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ K LF
Sbjct: 204 G-MGYKENVDLWSVGCIMGEMVCHKILF 230
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQLPTWQ 111
E L A DLL KML +D +RI+ ++AL+ +VW E+ PPP++P Q
Sbjct: 290 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEA-PPPKIPDKQ 346
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 90/165 (54%), Gaps = 11/165 (6%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFN 253
RE+++L+ L H+N++ L ++ T + DF + YLV M DL +++ +
Sbjct: 68 RELRLLKHLKHENVIGLLDVFTPATSIEDFSE----VYLVTTLMGADLNNIVKCQALSDE 123
Query: 254 EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRP 313
V ++ QLL GL Y H +HRD+K SN+ +N E+++ DFGLAR + E
Sbjct: 124 HVQ--FLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE----- 176
Query: 314 YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
T V T WYR PE++L Y +D+WS GCI+ EL K LF
Sbjct: 177 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 221
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL+ I ++ GTP+P V + I+ + ++ L F P A+DLL +ML
Sbjct: 229 QLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLV 288
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++R++A +AL + H PE P
Sbjct: 289 LDSDQRVSAAEALAHAYFSQYHDPEDEP 316
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 113/208 (54%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + + VA+KK+ + + A RE+ +++ +NHKNI+ L
Sbjct: 23 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 82
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ Y+V E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 83 LNVFTPQKSLEEFQ----DVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 135
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 192
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ K LF
Sbjct: 193 G-MGYKENVDLWSVGCIMGEMVCHKILF 219
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQLPTWQ 111
E L A DLL KML +D +RI+ ++AL+ +VW E+ PPP++P Q
Sbjct: 279 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEA-PPPKIPDKQ 335
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + + VA+KK+ + + A RE+ +++ +NHKNI+ L
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ Y+V E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 89 LNVFTPQKSLEEFQ----DVYIVMELMDANLSQVIQ---MELDHERMSYLLYQMLVGIKH 141
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 198
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ LF
Sbjct: 199 G-MGYKENVDIWSVGCIMGEMIKGGVLF 225
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQLPTWQ 111
E L A DLL KML +D +RI+ ++AL+ +VW E+ PPP++P Q
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEA-PPPKIPDKQ 341
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + + VA+KK+ + + A RE+ +++ +NHKNI+ L
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ Y+V E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 89 LNVFTPQKSLEEFQ----DVYIVMELMDANLSQVIQ---MELDHERMSYLLYQMLCGIKH 141
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 198
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ LF
Sbjct: 199 G-MGYKENVDIWSVGCIMGEMIKGGVLF 225
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQLPTWQ 111
E L A DLL KML +D +RI+ ++AL+ +VW E+ PPP++P Q
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEA-PPPKIPDKQ 341
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + + VA+KK+ + + A RE+ +++ +NHKNI+ L
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ Y+V E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 89 LNVFTPQKSLEEFQ----DVYIVMELMDANLSQVIQ---MELDHERMSYLLYQMLCGIKH 141
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 198
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ LF
Sbjct: 199 G-MGYKENVDIWSVGCIMGEMIKGGVLF 225
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQLPTWQ 111
E L A DLL KML +D +RI+ ++AL+ +VW E+ PPP++P Q
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEA-PPPKIPDKQ 341
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 113/208 (54%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + + VA+KK+ + + A RE+ +++ +NHKNI+ L
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ Y+V E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 89 LNVFTPQKSLEEFQ----DVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 141
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR P +V+T +YR PE++L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEP---EVVTRYYRAPEVIL 198
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ K LF
Sbjct: 199 G-MGYKENVDIWSVGCIMGEMVCHKILF 225
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQLPTWQ 111
E L A DLL KML +D +RI+ ++AL+ +VW E+ PPP++P Q
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEA-PPPKIPDKQ 341
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 82
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 83 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCAKLTDDHVQ--FLIYQILRGLKY 136
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 191
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLF 219
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 286
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 287 LDSDKRITAAQALAHAYFAQYHDPDDEP 314
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + + VA+KK+ + + A RE+ +++ +NHKNI+ L
Sbjct: 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 89
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ Y+V E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 90 LNVFTPQKSLEEFQ----DVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 142
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 199
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ LF
Sbjct: 200 G-MGYKENVDIWSVGCIMGEMIKGGVLF 226
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQLPTWQ 111
E L A DLL KML +D +RI+ ++AL+ +VW E+ PPP++P Q
Sbjct: 286 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEA-PPPKIPDKQ 342
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + + VA+KK+ + + A RE+ +++ +NHKNI+ L
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ Y+V E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 89 LNVFTPQKSLEEFQ----DVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 141
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 198
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ LF
Sbjct: 199 G-MGYKENVDIWSVGCIMGEMIKGGVLF 225
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQLPTWQ 111
E L A DLL KML +D +RI+ ++AL+ +VW E+ PPP++P Q
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEA-PPPKIPDKQ 341
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + + VA+KK+ + + A RE+ +++ +NHKNI+ L
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ Y+V E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 89 LNVFTPQKSLEEFQ----DVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 141
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 198
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ LF
Sbjct: 199 G-MGYKENVDIWSVGCIMGEMIKGGVLF 225
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQLPTWQ 111
E L A DLL KML +D +RI+ ++AL+ +VW E+ PPP++P Q
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEA-PPPKIPDKQ 341
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 113/208 (54%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + + VA+KK+ + + A RE+ +++ +NHKNI+ L
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ Y+V E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 89 LNVFTPQKSLEEFQ----DVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 141
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR P +V+T +YR PE++L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEP---EVVTRYYRAPEVIL 198
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ K LF
Sbjct: 199 G-MGYKENVDLWSVGCIMGEMVCHKILF 225
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQLPTWQ 111
E L A DLL KML +D +RI+ ++AL+ +VW E+ PPP++P Q
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEA-PPPKIPDKQ 341
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 93 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 146
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 201
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLF 229
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 296
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 297 LDSDKRITAAQALAHAYFAQYHDPDDEP 324
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 46 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 105
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 106 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 159
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 214
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGRTLF 242
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 250 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 309
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 310 LDSDKRITAAQALAHAYFAQYHDPDDEP 337
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + + VA+KK+ + + A RE+ +++ +NHKNI+ L
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ Y+V E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 89 LNVFTPQKSLEEFQ----DVYIVMELMDANLSQVIQ---MELDHERMSYLLYQMLCGIKH 141
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 198
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ LF
Sbjct: 199 G-MGYKENVDIWSVGCIMGEMIKGGVLF 225
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQLPTWQ 111
E L A DLL KML +D +RI+ ++AL+ +VW E+ PPP++P Q
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEA-PPPKIPDKQ 341
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 115/210 (54%), Gaps = 15/210 (7%)
Query: 151 MEPLAAG--GLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIV 208
++P+ +G G+ F L + VA+KK+ + + A RE+ +L+ +NHKNI+
Sbjct: 27 LKPIGSGAQGIVCAAFDTVLGIN--VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNII 84
Query: 209 NLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGL 268
+L + T + +F+ YLV E MD +L ++ ++ + + ++ Q+L G+
Sbjct: 85 SLLNVFTPQKTLEEFQ----DVYLVMELMDANLCQVIH---MELDHERMSYLLYQMLCGI 137
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
+ H +HRD+K SNI++ + +K+ DFGLAR + PY V+T +YR PE+
Sbjct: 138 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPY---VVTRYYRAPEV 194
Query: 329 LLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+LG Y +D+WS GCI+GEL +F
Sbjct: 195 ILG-MGYKENVDIWSVGCIMGELVKGSVIF 223
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 5/45 (11%)
Query: 67 ALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQL 107
A DLL KML +DP++RI+ ++AL+ +VW E+ PPPQ+
Sbjct: 292 ARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAEAEA-PPPQI 335
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 47 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 106
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 107 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 160
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 215
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRTLF 243
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 251 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 310
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 311 LDSDKRITAAQALAHAYFAQYHDPDDEP 338
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 82
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 83 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 136
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 191
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLF 219
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 286
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 287 LDSDKRITAAQALAHAYFAQYHDPDDEP 314
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 37 LAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 96
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 97 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 150
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 151 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 205
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 206 NWMHYNQTVDIWSVGCIMAELLTGRTLF 233
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 241 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 300
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 301 LDSDKRITAAQALAHAYFAQYHDPDDEP 328
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NAMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++S + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKSQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGL R + E T V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE-----MTGYVATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 112/203 (55%), Gaps = 15/203 (7%)
Query: 151 MEPLAAG--GLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIV 208
++P+ +G G+ F L + VA+KK+ + + A RE+ +L+ +NHKNI+
Sbjct: 29 LKPIGSGAQGIVCAAFDTVLGIN--VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNII 86
Query: 209 NLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGL 268
+L + T + +F+ YLV E MD +L ++ ++ + + ++ Q+L G+
Sbjct: 87 SLLNVFTPQKTLEEFQ----DVYLVMELMDANLCQVIH---MELDHERMSYLLYQMLCGI 139
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
+ H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPY---VVTRYYRAPEV 196
Query: 329 LLGEERYGPAIDVWSCGCILGEL 351
+LG Y +D+WS GCI+GEL
Sbjct: 197 ILG-MGYAANVDIWSVGCIMGEL 218
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 5/45 (11%)
Query: 67 ALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQL 107
A DLL KML +DP++RI+ ++AL+ +VW E+ PPPQ+
Sbjct: 294 ARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAEAEA-PPPQI 337
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 93 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 146
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 201
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLF 229
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 296
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 297 LDSDKRITAAQALAHAYFAQYHDPDDEP 324
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 89 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 142
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 197
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 292
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 293 LDSDKRITAAQALAHAYFAQYHDPDDEP 320
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G S + + +A+KK+ + RE+++L+ + H+N++ L
Sbjct: 56 LSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 115
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T + +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 116 LDVFTPATSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 169
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 170 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 224
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 225 NWMHYNMTVDIWSVGCIMAELLTGRTLF 252
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL+ I +L GTP +V + + I ++ +R + F P A+DLL+KML
Sbjct: 260 QLQQIMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLV 319
Query: 77 LDPERRITAEQALKSVWLKNVH-----PESMPPPQ 106
LD ++RITA +AL + H PES P Q
Sbjct: 320 LDTDKRITASEALAHPYFSQYHDPDDEPESEPYDQ 354
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKXQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 32 LSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 92 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 145
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 200
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 295
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 296 LDSDKRITAAQALAHAYFAQYHDPDDEP 323
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + + VA+KK+ + + A RE+ +++ +NHKNI+ L
Sbjct: 31 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 90
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ Y+V E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 91 LNVFTPQKSLEEFQ----DVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 143
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR P+ V+T +YR PE++L
Sbjct: 144 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPF---VVTRYYRAPEVIL 200
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ LF
Sbjct: 201 G-MGYKENVDIWSVGCIMGEMIKGGVLF 227
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQLPTWQ 111
E L A DLL KML +D +RI+ ++AL+ +VW E+ PPP++P Q
Sbjct: 287 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEA-PPPKIPDKQ 343
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 93 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 146
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 201
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLF 229
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 296
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 297 LDSDKRITAAQALAHAYFAQYHDPDDEP 324
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 38 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 97
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 98 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 151
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 206
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGRTLF 234
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 242 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 301
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 302 LDSDKRITAAQALAHAYFAQYHDPDDEP 329
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGXVATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 89 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 142
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 197
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 292
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 293 LDSDKRITAAQALAHAYFAQYHDPDDEP 320
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 50 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 109
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 110 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 163
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 218
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGRTLF 246
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 254 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 313
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 314 LDSDKRITAAQALAHAYFAQYHDPDDEP 341
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 32 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 92 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 145
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 200
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 295
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 296 LDSDKRITAAQALAHAYFAQYHDPDDEP 323
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 46 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 105
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 106 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 159
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 214
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGRTLF 242
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 250 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 309
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 310 LDSDKRITAAQALAHAYFAQYHDPDDEP 337
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 93 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 146
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 201
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLF 229
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 296
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 297 LDSDKRITAAQALAHAYFAQYHDPDDEP 324
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 38 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 97
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 98 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 151
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 206
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGRTLF 234
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 242 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 301
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 302 LDSDKRITAAQALAHAYFAQYHDPDDEP 329
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 82
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 83 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 136
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 191
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLF 219
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 286
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 287 LDSDKRITAAQALAHAYFAQYHDPDDEP 314
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 39 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 99 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 152
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 207
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGRTLF 235
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 243 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 302
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 303 LDSDKRITAAQALAHAYFAQYHDPDDEP 330
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 24 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 83
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 84 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 137
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 192
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGRTLF 220
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 228 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 287
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 288 LDSDKRITAAQALAHAYFAQYHDPDDEP 315
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 39 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 99 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 152
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 207
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGRTLF 235
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 243 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 302
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 303 LDSDKRITAAQALAHAYFAQYHDPDDEP 330
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVHPESMPPPQLPTWQ 111
LD ++RITA QAL + H P PT Q
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEPVADPTDQ 325
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 47 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 106
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 107 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 160
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 215
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRTLF 243
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 251 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 310
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 311 LDSDKRITAAQALAHAYFAQYHDPDDEP 338
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 89 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 142
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 197
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 292
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 293 LDSDKRITAAQALAHAYFAQYHDPDDEP 320
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 94 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 147
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 202
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 297
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 298 LDSDKRITAAQALAHAYFAQYHDPDDEP 325
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 111/208 (53%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + + VA+KK+ + + A RE+ +++ +NHKNI+ L
Sbjct: 29 LKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ Y+V E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 89 LNVFTPQKSLEEFQ----DVYIVMELMDANLSQVIQ---MELDHERMSYLLYQMLVGIKH 141
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 198
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS G I+GE+ LF
Sbjct: 199 G-MGYKENVDIWSVGVIMGEMIKGGVLF 225
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQLPTWQ 111
E L A DLL KML +D +RI+ ++AL+ +VW E+ PPP++P Q
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEA-PPPKIPDKQ 341
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 25 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 84
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 85 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 138
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 139 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 193
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLTGRTLF 221
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 229 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 288
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 289 LDSDKRITAAQALAHAYFAQYHDPDDEP 316
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 32 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 92 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 145
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 200
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 295
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 296 LDSDKRITAAQALAHAYFAQYHDPDDEP 323
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 26 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 85
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 86 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 139
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 140 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 194
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 195 NWMHYNQTVDIWSVGCIMAELLTGRTLF 222
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 230 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 289
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 290 LDSDKRITAAQALAHAYFAQYHDPDDEP 317
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKXQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 39 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 99 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 152
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 207
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGRTLF 235
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 243 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 302
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 303 LDSDKRITAAQALAHAYFAQYHDPDDEP 330
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 32 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 92 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 145
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 200
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 295
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 296 LDSDKRITAAQALAHAYFAQYHDPDDEP 323
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 89 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 142
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 197
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 292
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 293 LDSDKRITAAQALAHAYFAQYHDPDDEP 320
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 92/185 (49%), Gaps = 31/185 (16%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDF 252
+REI IL +LNH ++V + +IV K D F Y+V E D D L + V
Sbjct: 100 LREIAILNRLNHDHVVKVLDIVIPK-DVEKF----DELYVVLEIADSDFKKLFRTP-VYL 153
Query: 253 NEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYN------ 306
E++ +++ LL G+ Y H LHRD+K +N L+N VK+ DFGLAR +
Sbjct: 154 TELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGN 213
Query: 307 -------------------AEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
++ +R T V+T WYR PEL+L +E Y AIDVWS GCI
Sbjct: 214 SQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCI 273
Query: 348 LGELF 352
EL
Sbjct: 274 FAELL 278
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIK--PKKIHRRRLREEFSLMPPGALDLLDKML 75
QL VI + GTP+ A+ K I+ PK+ L E F A+ LL +ML
Sbjct: 323 QLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKR-EGTDLAERFPASSADAIHLLKRML 381
Query: 76 ELDPERRITAEQALKSVWLKNV 97
+P +RIT + L + K V
Sbjct: 382 VFNPNKRITINECLAHPFFKEV 403
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 111/208 (53%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + + VA+KK+ + + A RE+ +++ +NHKNI+ L
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ Y+V E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 89 LNVFTPQKSLEEFQ----DVYIVMELMDANLSQVIQ---MELDHERMSYLLYQMLVGIKH 141
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR PY V+T +YR PE++L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY---VVTRYYRAPEVIL 198
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS G I+GE+ LF
Sbjct: 199 G-MGYKENVDIWSVGVIMGEMIKGGVLF 225
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQLPTWQ 111
E L A DLL KML +D +RI+ ++AL+ +VW E+ PPP++P Q
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEA-PPPKIPDKQ 341
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 24 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 83
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 84 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 137
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E T V T WYR PE++L
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 192
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGRTLF 220
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 228 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 287
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 288 LDSDKRITAAQALAHAYFAQYHDPDDEP 315
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 47 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 106
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 107 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 160
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + E V T WYR PE++L
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGXVATRWYRAPEIML 215
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRTLF 243
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 251 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 310
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 311 LDSDKRITAAQALAHAYFAQYHDPDDEP 338
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++P+ +G + + + VA+KK+ + + A RE+ +++ +NHKNI+ L
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+ T + +F+ Y+V E MD +L +++ ++ + + ++ Q+L G+ +
Sbjct: 89 LNVFTPQKSLEEFQ----DVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH 141
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRD+K SNI++ + +K+ DFGLAR P +V+T +YR PE++L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP---EVVTRYYRAPEVIL 198
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
G Y +D+WS GCI+GE+ LF
Sbjct: 199 G-MGYKENVDIWSVGCIMGEMIKGGVLF 225
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALK----SVWLKNVHPESMPPPQLPTWQ 111
E +L A DLL KML +D +RI+ ++AL+ +VW E+ PPP++P Q
Sbjct: 285 EHNALKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEA-PPPKIPDKQ 341
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 94 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 147
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + A++ T V T WYR PE++L
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEM----TGYVATRWYRAPEIML 202
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 297
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 298 LDSDKRITAAQALAHAYFAQYHDPDDEP 325
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 94 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 147
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + A++ T V T WYR PE++L
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEM----TGYVATRWYRAPEIML 202
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 297
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 298 LDSDKRITAAQALAHAYFAQYHDPDDEP 325
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 50 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 109
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 110 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 163
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + +D Y V T WYR PE++L
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGY---VATRWYRAPEIML 218
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGRTLF 246
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 254 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 313
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 314 LDSDKRITAAQALAHAYFAQYHDPDDEP 341
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + +D + V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGF---VATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 94 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 147
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + A++ T V T WYR PE++L
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEM----TGYVATRWYRAPEIML 202
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 297
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 298 LDSDKRITAAQALAHAYFAQYHDPDDEP 325
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + +D + V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGF---VATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 82
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 83 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 136
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DFGLAR + +D + V T WYR PE++L
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGF---VATRWYRAPEIML 191
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLF 219
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 286
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 287 LDSDKRITAAQALAHAYFAQYHDPDDEP 314
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ D+GLAR + E T V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ DF LAR + E T V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ FGLAR + E T V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ D GLAR + E T V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ D GLAR + E T V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+ P+ +G + T VA+KK+ + RE+++L+ + H+N++ L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
++ T +F YLV M DL +++ + + V ++ Q+L GL Y
Sbjct: 87 LDVFTPARSLEEF----NDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 140
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H + +HRD+K SN+ +N E+K+ D GLAR + E T V T WYR PE++L
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE-----MTGYVATRWYRAPEIML 195
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y +D+WS GCI+ EL + LF
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKP-KKIHRRRLREEFSLMPPGALDLLDKMLE 76
QL++I +L GTP + + + I+ ++ + F P A+DLL+KML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 77 LDPERRITAEQALKSVWLKNVH-PESMP 103
LD ++RITA QAL + H P+ P
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHDPDDEP 318
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 103/203 (50%), Gaps = 26/203 (12%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T++ VA+KKV E +REI IL +L I+ L +++ D L F
Sbjct: 50 TEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLII-PDDLLKF----DE 104
Query: 230 FYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
Y+V E D DL L ++ + E + +I+ LL G ++ H+ +HRD+K +N L+N
Sbjct: 105 LYIVLEIADSDLKKLFKTPIF-LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN 163
Query: 290 NRGEVKLADFGLARLYNAE--------------------DRQRPYTNKVITLWYRPPELL 329
VK+ DFGLAR N+E + ++ T+ V+T WYR PEL+
Sbjct: 164 QDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELI 223
Query: 330 LGEERYGPAIDVWSCGCILGELF 352
L +E Y +ID+WS GCI EL
Sbjct: 224 LLQENYTKSIDIWSTGCIFAELL 246
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIK--PKKIHRR--RLREEFSLMPPGALDLLDK 73
QL +I + GTPT + K + IK P HR+ L++++ + ++LL+
Sbjct: 288 QLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFP---HRKPINLKQKYPSISDDGINLLES 344
Query: 74 MLELDPERRITAEQALKSVWLKNVHPESM 102
ML+ +P +RIT +QAL +LK+V + +
Sbjct: 345 MLKFNPNKRITIDQALDHPYLKDVRKKKL 373
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 109/191 (57%), Gaps = 24/191 (12%)
Query: 172 ELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
++++ ++V+ + +KE +RE+++L+QL+H NI+ L E F +DKG FY
Sbjct: 80 KVISKRQVKQKTDKESL----LREVQLLKQLDHPNIMKLYE----------FFEDKGYFY 125
Query: 232 LVFE-YMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
LV E Y +L + S F+EV+ A I+RQ+L G++Y HK +HRD+K N+L+ +
Sbjct: 126 LVGEVYTGGELFDEIIS-RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLES 184
Query: 291 RGE---VKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+ + +++ DFGL+ + A + + +K+ T +Y PE+L G Y DVWS G I
Sbjct: 185 KSKDANIRIIDFGLSTHFEASKKMK---DKIGTAYYIAPEVLHG--TYDEKCDVWSTGVI 239
Query: 348 LGELFVKKPLF 358
L L P F
Sbjct: 240 LYILLSGCPPF 250
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 63 MPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPE--SMPPPQL 107
+ A DL+ KML P RI+A AL W++ E S+ P L
Sbjct: 277 VSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSL 323
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 109/191 (57%), Gaps = 24/191 (12%)
Query: 172 ELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
++++ ++V+ + +KE +RE+++L+QL+H NI+ L E F +DKG FY
Sbjct: 81 KVISKRQVKQKTDKESL----LREVQLLKQLDHPNIMKLYE----------FFEDKGYFY 126
Query: 232 LVFE-YMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
LV E Y +L + S F+EV+ A I+RQ+L G++Y HK +HRD+K N+L+ +
Sbjct: 127 LVGEVYTGGELFDEIIS-RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLES 185
Query: 291 RGE---VKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+ + +++ DFGL+ + A + + +K+ T +Y PE+L G Y DVWS G I
Sbjct: 186 KSKDANIRIIDFGLSTHFEASKKMK---DKIGTAYYIAPEVLHG--TYDEKCDVWSTGVI 240
Query: 348 LGELFVKKPLF 358
L L P F
Sbjct: 241 LYILLSGCPPF 251
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 63 MPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPE--SMPPPQL 107
+ A DL+ KML P RI+A AL W++ E S+ P L
Sbjct: 278 VSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSL 324
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 109/191 (57%), Gaps = 24/191 (12%)
Query: 172 ELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
++++ ++V+ + +KE +RE+++L+QL+H NI+ L E F +DKG FY
Sbjct: 57 KVISKRQVKQKTDKESL----LREVQLLKQLDHPNIMKLYE----------FFEDKGYFY 102
Query: 232 LVFE-YMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
LV E Y +L + S F+EV+ A I+RQ+L G++Y HK +HRD+K N+L+ +
Sbjct: 103 LVGEVYTGGELFDEIIS-RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLES 161
Query: 291 RGE---VKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+ + +++ DFGL+ + A + + +K+ T +Y PE+L G Y DVWS G I
Sbjct: 162 KSKDANIRIIDFGLSTHFEASKKMK---DKIGTAYYIAPEVLHG--TYDEKCDVWSTGVI 216
Query: 348 LGELFVKKPLF 358
L L P F
Sbjct: 217 LYILLSGCPPF 227
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 63 MPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPE--SMPPPQL 107
+ A DL+ KML P RI+A AL W++ E S+ P L
Sbjct: 254 VSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSL 300
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 29/202 (14%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+KKV E +REI IL +L I+ L +++ + D L F Y+V
Sbjct: 56 VAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLIIPE-DLLKF----DELYIV 110
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
E D DL L ++ + E + +I+ LL G + H+ +HRD+K +N L+N
Sbjct: 111 LEIADSDLKKLFKTPIF-LTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCS 169
Query: 294 VKLADFGLARLYNAE-----------------------DRQRPYTNKVITLWYRPPELLL 330
VK+ DFGLAR N++ + ++ T+ V+T WYR PEL+L
Sbjct: 170 VKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELIL 229
Query: 331 GEERYGPAIDVWSCGCILGELF 352
+E Y +ID+WS GCI EL
Sbjct: 230 LQENYTNSIDIWSTGCIFAELL 251
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 18 QLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRR----LREEFSLMPPGALDLLDK 73
QL +I + GTP + K IK K+ R L +++S + +DLL+
Sbjct: 293 QLNIIFNVIGTPPEEDLKCITK---QEVIKYIKLFPTRDGIDLSKKYSSISKEGIDLLES 349
Query: 74 MLELDPERRITAEQALKSVWLKNVHPESM 102
ML + ++RIT ++AL +LK+V E++
Sbjct: 350 MLRFNAQKRITIDKALSHPYLKDVRKENL 378
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 110/191 (57%), Gaps = 24/191 (12%)
Query: 172 ELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
++++ ++V+ + +KE + +RE+++L+QL+H NI+ L E F +DKG FY
Sbjct: 63 KVISKRQVKQKTDKE----SLLREVQLLKQLDHPNIMKLYE----------FFEDKGYFY 108
Query: 232 LVFE-YMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
LV E Y +L + S F+EV+ A I+RQ+L G++Y HK +HRD+K N+L+ +
Sbjct: 109 LVGEVYTGGELFDEIIS-RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLES 167
Query: 291 RGE---VKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+ + +++ DFGL+ + A + + +K+ T +Y PE+L G Y DVWS G I
Sbjct: 168 KSKDANIRIIDFGLSTHFEASKKMK---DKIGTAYYIAPEVLHGT--YDEKCDVWSTGVI 222
Query: 348 LGELFVKKPLF 358
L L P F
Sbjct: 223 LYILLSGCPPF 233
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 108/191 (56%), Gaps = 24/191 (12%)
Query: 172 ELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
++++ ++V+ + +KE +RE+++L+QL+H NI L E F +DKG FY
Sbjct: 57 KVISKRQVKQKTDKESL----LREVQLLKQLDHPNIXKLYE----------FFEDKGYFY 102
Query: 232 LVFE-YMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
LV E Y +L + S F+EV+ A I+RQ+L G++Y HK +HRD+K N+L+ +
Sbjct: 103 LVGEVYTGGELFDEIIS-RKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLES 161
Query: 291 RGE---VKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+ + +++ DFGL+ + A + + +K+ T +Y PE+L G Y DVWS G I
Sbjct: 162 KSKDANIRIIDFGLSTHFEASKKXK---DKIGTAYYIAPEVLHG--TYDEKCDVWSTGVI 216
Query: 348 LGELFVKKPLF 358
L L P F
Sbjct: 217 LYILLSGCPPF 227
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 98/197 (49%), Gaps = 25/197 (12%)
Query: 170 TDELVALKKV----RLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRK 225
+ ELVA+KKV R +N RE++I+R+L+H NIV LR + +K
Sbjct: 78 SGELVAIKKVLQDKRFKN----------RELQIMRKLDHCNIVRLRYFFYSSGE----KK 123
Query: 226 DKGSFYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIK 282
D+ LV +Y+ + + + M QL L+Y H HRDIK
Sbjct: 124 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 183
Query: 283 CSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDV 341
N+L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDV
Sbjct: 184 PQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPELIFGATDYTSSIDV 240
Query: 342 WSCGCILGELFVKKPLF 358
WS GC+L EL + +P+F
Sbjct: 241 WSAGCVLAELLLGQPIF 257
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 98/197 (49%), Gaps = 25/197 (12%)
Query: 170 TDELVALKKV----RLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRK 225
+ ELVA+KKV R +N RE++I+R+L+H NIV LR + +K
Sbjct: 123 SGELVAIKKVLQDKRFKN----------RELQIMRKLDHCNIVRLRYFFYSSGE----KK 168
Query: 226 DKGSFYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIK 282
D+ LV +Y+ + + + M QL L+Y H HRDIK
Sbjct: 169 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 228
Query: 283 CSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDV 341
N+L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDV
Sbjct: 229 PQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPELIFGATDYTSSIDV 285
Query: 342 WSCGCILGELFVKKPLF 358
WS GC+L EL + +P+F
Sbjct: 286 WSAGCVLAELLLGQPIF 302
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 98/197 (49%), Gaps = 25/197 (12%)
Query: 170 TDELVALKKV----RLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRK 225
+ ELVA+KKV R +N RE++I+R+L+H NIV LR + +K
Sbjct: 72 SGELVAIKKVLQDKRFKN----------RELQIMRKLDHCNIVRLRYFFYSSGE----KK 117
Query: 226 DKGSFYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIK 282
D+ LV +Y+ + + + M QL L+Y H HRDIK
Sbjct: 118 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 177
Query: 283 CSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDV 341
N+L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDV
Sbjct: 178 PQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPELIFGATDYTSSIDV 234
Query: 342 WSCGCILGELFVKKPLF 358
WS GC+L EL + +P+F
Sbjct: 235 WSAGCVLAELLLGQPIF 251
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 98/197 (49%), Gaps = 25/197 (12%)
Query: 170 TDELVALKKV----RLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRK 225
+ ELVA+KKV R +N RE++I+R+L+H NIV LR + +K
Sbjct: 82 SGELVAIKKVLQDKRFKN----------RELQIMRKLDHCNIVRLRYFFYSSGE----KK 127
Query: 226 DKGSFYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIK 282
D+ LV +Y+ + + + M QL L+Y H HRDIK
Sbjct: 128 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 187
Query: 283 CSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDV 341
N+L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDV
Sbjct: 188 PQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPELIFGATDYTSSIDV 244
Query: 342 WSCGCILGELFVKKPLF 358
WS GC+L EL + +P+F
Sbjct: 245 WSAGCVLAELLLGQPIF 261
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 98/179 (54%), Gaps = 24/179 (13%)
Query: 186 EGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLL 245
E F EI +L+ L+H NI+ L D +DK FYLV E+ + G L
Sbjct: 87 EKFHEEIYNEISLLKSLDHPNIIKL----------FDVFEDKKYFYLVTEFYEG---GEL 133
Query: 246 ESGMVD---FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE---VKLADF 299
+++ F+E + A+IM+Q+L G+ Y HK N +HRDIK NIL+ N+ +K+ DF
Sbjct: 134 FEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDF 193
Query: 300 GLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
GL+ ++ + + R +++ T +Y PE+L +++Y DVWSCG I+ L P F
Sbjct: 194 GLSSFFSKDYKLR---DRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPF 247
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 63 MPPGALDLLDKMLELDPERRITAEQALKSVWLK 95
+ A +L+ ML D +R TAE+AL S W+K
Sbjct: 274 ISDEAKELIKLMLTYDYNKRCTAEEALNSRWIK 306
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 98/197 (49%), Gaps = 25/197 (12%)
Query: 170 TDELVALKKV----RLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRK 225
+ ELVA+KKV R +N RE++I+R+L+H NIV LR + +K
Sbjct: 80 SGELVAIKKVLQDKRFKN----------RELQIMRKLDHCNIVRLRYFFYSSGE----KK 125
Query: 226 DKGSFYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIK 282
D+ LV +Y+ + + + M QL L+Y H HRDIK
Sbjct: 126 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 185
Query: 283 CSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDV 341
N+L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDV
Sbjct: 186 PQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPELIFGATDYTSSIDV 242
Query: 342 WSCGCILGELFVKKPLF 358
WS GC+L EL + +P+F
Sbjct: 243 WSAGCVLAELLLGQPIF 259
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 98/197 (49%), Gaps = 25/197 (12%)
Query: 170 TDELVALKKV----RLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRK 225
+ ELVA+KKV R +N RE++I+R+L+H NIV LR + +K
Sbjct: 78 SGELVAIKKVLQDKRFKN----------RELQIMRKLDHCNIVRLRYFFYSSGE----KK 123
Query: 226 DKGSFYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIK 282
D+ LV +Y+ + + + M QL L+Y H HRDIK
Sbjct: 124 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 183
Query: 283 CSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDV 341
N+L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDV
Sbjct: 184 PQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPELIFGATDYTSSIDV 240
Query: 342 WSCGCILGELFVKKPLF 358
WS GC+L EL + +P+F
Sbjct: 241 WSAGCVLAELLLGQPIF 257
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 98/197 (49%), Gaps = 25/197 (12%)
Query: 170 TDELVALKKV----RLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRK 225
+ ELVA+KKV R +N RE++I+R+L+H NIV LR + +K
Sbjct: 49 SGELVAIKKVLQDKRFKN----------RELQIMRKLDHCNIVRLRYFFYSSGE----KK 94
Query: 226 DKGSFYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIK 282
D+ LV +Y+ + + + M QL L+Y H HRDIK
Sbjct: 95 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 154
Query: 283 CSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDV 341
N+L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDV
Sbjct: 155 PQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPELIFGATDYTSSIDV 211
Query: 342 WSCGCILGELFVKKPLF 358
WS GC+L EL + +P+F
Sbjct: 212 WSAGCVLAELLLGQPIF 228
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 17/193 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
+ ELVA+KKV + + RE++I+R+L+H NIV LR + +KD+
Sbjct: 56 SGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGE----KKDEVY 105
Query: 230 FYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
LV +Y+ + + + M QL L+Y H HRDIK N+
Sbjct: 106 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 165
Query: 287 LMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDVWS G
Sbjct: 166 LLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAG 222
Query: 346 CILGELFVKKPLF 358
C+L EL + +P+F
Sbjct: 223 CVLAELLLGQPIF 235
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 17/193 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
+ ELVA+KKV + + RE++I+R+L+H NIV LR + +KD+
Sbjct: 56 SGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGE----KKDEVY 105
Query: 230 FYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
LV +Y+ + + + M QL L+Y H HRDIK N+
Sbjct: 106 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 165
Query: 287 LMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDVWS G
Sbjct: 166 LLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAG 222
Query: 346 CILGELFVKKPLF 358
C+L EL + +P+F
Sbjct: 223 CVLAELLLGQPIF 235
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 17/193 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
+ ELVA+KKV + + RE++I+R+L+H NIV LR + +KD+
Sbjct: 63 SGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGE----KKDEVY 112
Query: 230 FYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
LV +Y+ + + + M QL L+Y H HRDIK N+
Sbjct: 113 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 172
Query: 287 LMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDVWS G
Sbjct: 173 LLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAG 229
Query: 346 CILGELFVKKPLF 358
C+L EL + +P+F
Sbjct: 230 CVLAELLLGQPIF 242
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 17/193 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
+ ELVA+KKV + + RE++I+R+L+H NIV LR + +KD+
Sbjct: 52 SGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGE----KKDEVY 101
Query: 230 FYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
LV +Y+ + + + M QL L+Y H HRDIK N+
Sbjct: 102 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 161
Query: 287 LMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDVWS G
Sbjct: 162 LLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAG 218
Query: 346 CILGELFVKKPLF 358
C+L EL + +P+F
Sbjct: 219 CVLAELLLGQPIF 231
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 17/193 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
+ ELVA+KKV + + RE++I+R+L+H NIV LR + +KD+
Sbjct: 44 SGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGE----KKDEVY 93
Query: 230 FYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
LV +Y+ + + + M QL L+Y H HRDIK N+
Sbjct: 94 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 153
Query: 287 LMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDVWS G
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAG 210
Query: 346 CILGELFVKKPLF 358
C+L EL + +P+F
Sbjct: 211 CVLAELLLGQPIF 223
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 17/193 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
+ ELVA+KKV + + RE++I+R+L+H NIV LR + +KD+
Sbjct: 44 SGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGE----KKDEVY 93
Query: 230 FYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
LV +Y+ + + + M QL L+Y H HRDIK N+
Sbjct: 94 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 153
Query: 287 LMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDVWS G
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAG 210
Query: 346 CILGELFVKKPLF 358
C+L EL + +P+F
Sbjct: 211 CVLAELLLGQPIF 223
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 17/193 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
+ ELVA+KKV + + RE++I+R+L+H NIV LR + +KD+
Sbjct: 48 SGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGE----KKDEVY 97
Query: 230 FYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
LV +Y+ + + + M QL L+Y H HRDIK N+
Sbjct: 98 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 157
Query: 287 LMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDVWS G
Sbjct: 158 LLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAG 214
Query: 346 CILGELFVKKPLF 358
C+L EL + +P+F
Sbjct: 215 CVLAELLLGQPIF 227
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 17/193 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
+ ELVA+KKV + + RE++I+R+L+H NIV LR + +KD+
Sbjct: 45 SGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGE----KKDEVY 94
Query: 230 FYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
LV +Y+ + + + M QL L+Y H HRDIK N+
Sbjct: 95 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 154
Query: 287 LMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDVWS G
Sbjct: 155 LLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAG 211
Query: 346 CILGELFVKKPLF 358
C+L EL + +P+F
Sbjct: 212 CVLAELLLGQPIF 224
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 17/193 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
+ ELVA+KKV + + RE++I+R+L+H NIV LR + +KD+
Sbjct: 57 SGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGE----KKDEVY 106
Query: 230 FYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
LV +Y+ + + + M QL L+Y H HRDIK N+
Sbjct: 107 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 166
Query: 287 LMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDVWS G
Sbjct: 167 LLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAG 223
Query: 346 CILGELFVKKPLF 358
C+L EL + +P+F
Sbjct: 224 CVLAELLLGQPIF 236
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 17/193 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
+ ELVA+KKV + + RE++I+R+L+H NIV LR + +KD+
Sbjct: 44 SGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGE----KKDEVY 93
Query: 230 FYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
LV +Y+ + + + M QL L+Y H HRDIK N+
Sbjct: 94 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 153
Query: 287 LMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDVWS G
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAG 210
Query: 346 CILGELFVKKPLF 358
C+L EL + +P+F
Sbjct: 211 CVLAELLLGQPIF 223
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 96/193 (49%), Gaps = 17/193 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
+ ELVA+KKV + + RE++I+R+L+H NIV LR + +KD
Sbjct: 44 SGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGE----KKDVVY 93
Query: 230 FYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
LV +Y+ + + + M QL L+Y H HRDIK N+
Sbjct: 94 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 153
Query: 287 LMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDVWS G
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAG 210
Query: 346 CILGELFVKKPLF 358
C+L EL + +P+F
Sbjct: 211 CVLAELLLGQPIF 223
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 98/193 (50%), Gaps = 17/193 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
+ ELVA+KKV + + F RE++I+R+L+H NIV LR + +KD+
Sbjct: 44 SGELVAIKKVL---QGKAF---KNRELQIMRKLDHCNIVRLRYFFYSSGE----KKDEVY 93
Query: 230 FYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
LV +Y+ + + + M QL L+Y H HRDIK N+
Sbjct: 94 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 153
Query: 287 LMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDVWS G
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAG 210
Query: 346 CILGELFVKKPLF 358
C+L EL + +P+F
Sbjct: 211 CVLAELLLGQPIF 223
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 98/193 (50%), Gaps = 17/193 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
+ ELVA+KKV + + F RE++I+R+L+H NIV LR + +KD+
Sbjct: 44 SGELVAIKKVL---QGKAF---KNRELQIMRKLDHCNIVRLRYFFYSSGE----KKDEVY 93
Query: 230 FYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
LV +Y+ + + + M QL L+Y H HRDIK N+
Sbjct: 94 LNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 153
Query: 287 LMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDVWS G
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAG 210
Query: 346 CILGELFVKKPLF 358
C+L EL + +P+F
Sbjct: 211 CVLAELLLGQPIF 223
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 98/193 (50%), Gaps = 17/193 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
+ ELVA+KKV + + F RE++I+R+L+H NIV LR + +KD+
Sbjct: 44 SGELVAIKKVL---QGKAF---KNRELQIMRKLDHCNIVRLRYFFYSSGE----KKDEVY 93
Query: 230 FYLVFEYMDHDLMGL---LESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
LV +Y+ + + + M QL L+Y H HRDIK N+
Sbjct: 94 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 153
Query: 287 LMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
L++ + +KL DFG A+ R P + + + +YR PEL+ G Y +IDVWS G
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAG 210
Query: 346 CILGELFVKKPLF 358
C+L EL + +P+F
Sbjct: 211 CVLAELLLGQPIF 223
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 33/207 (15%)
Query: 164 FSVSLFTDELVALKKV----RLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSD 219
F L + VA+KKV R +N RE++I+R + H N+V+L+ D
Sbjct: 57 FQAKLVESDEVAIKKVLQDKRFKN----------RELQIMRIVKHPNVVDLKAFFYSNGD 106
Query: 220 ALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNAS-------IMRQLLDGLSYCH 272
+KD+ LV EY+ + + ++ M QLL L+Y H
Sbjct: 107 ----KKDEVFLNLVLEYVPETVY----RASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH 158
Query: 273 KRNFLHRDIKCSNILMNN-RGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLG 331
HRDIK N+L++ G +KL DFG A++ A + P + + + +YR PEL+ G
Sbjct: 159 SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE---PNVSXICSRYYRAPELIFG 215
Query: 332 EERYGPAIDVWSCGCILGELFVKKPLF 358
Y ID+WS GC++ EL +PLF
Sbjct: 216 ATNYTTNIDIWSTGCVMAELMQGQPLF 242
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 64 PPGALDLLDKMLELDPERRITAEQAL 89
PP A+DL+ ++LE P R+TA +AL
Sbjct: 295 PPDAIDLISRLLEYTPSARLTAIEAL 320
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 8/167 (4%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
+REI++L +H NI+ LR+I + YLV E M DL ++ +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPA-----MHKLYLVTELMRTDLAQVIHDQRIV 130
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
+ + M +L GL H+ +HRD+ NIL+ + ++ + DF LAR A+ +
Sbjct: 131 ISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK 190
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
T+ V WYR PEL++ + + +D+WS GC++ E+F +K LF
Sbjct: 191 ---THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 65 PGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
P ALDL+ KMLE +P+RRI+ EQAL+ + +++
Sbjct: 291 PVALDLIAKMLEFNPQRRISTEQALRHPYFESL 323
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 8/167 (4%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
+REI++L +H NI+ LR+I + YLV E M DL ++ +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPA-----MHKLYLVTELMRTDLAQVIHDQRIV 130
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
+ + M +L GL H+ +HRD+ NIL+ + ++ + DF LAR A+ +
Sbjct: 131 ISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK 190
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
T+ V WYR PEL++ + + +D+WS GC++ E+F +K LF
Sbjct: 191 ---THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 65 PGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
P ALDL+ KMLE +P+RRI+ EQAL+ + +++
Sbjct: 291 PVALDLIAKMLEFNPQRRISTEQALRHPYFESL 323
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENVVK 68
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 69 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 117
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLA 202
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENVVK 69
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 70 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 118
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 178
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLA 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVK 69
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 70 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 118
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLA 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENVVK 68
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 69 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 117
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLA 202
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 96/170 (56%), Gaps = 20/170 (11%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFE-YMDHDLMGLLESGMVD 251
+ E+ +L+ L+H NI+ L DF +DK ++YLV E Y +L + M
Sbjct: 84 LEEVAVLKLLDHPNIMKL----------YDFFEDKRNYYLVMECYKGGELFDEIIHRM-K 132
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE---VKLADFGLARLYNAE 308
FNEV+ A I++Q+L G++Y HK N +HRD+K N+L+ ++ + +K+ DFGL+ ++
Sbjct: 133 FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF--- 189
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ Q+ ++ T +Y PE+L ++Y DVWS G IL L P F
Sbjct: 190 ENQKKMKERLGTAYYIAPEVL--RKKYDEKCDVWSIGVILFILLAGYPPF 237
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 63 MPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQLPTWQDCHELWSKKRR 122
+ GA DL+ +ML+ D +RRI+A+QAL+ W+K + + +LP+ + E K +
Sbjct: 264 VSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQN 323
Query: 123 RQ 124
Q
Sbjct: 324 SQ 325
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVK 68
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 69 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 117
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLA 202
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVK 69
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 70 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 118
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLA 203
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVK 69
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 70 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 118
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLA 203
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVK 69
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 70 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 118
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLA 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 9 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVK 67
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 68 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 116
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 117 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 177 LKRREFHAEPVDVWSCGIVLTAMLA 201
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVK 69
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 70 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 118
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLA 203
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 10 LVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVK 68
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 69 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 117
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLA 202
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVK 68
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 69 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 117
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLA 202
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVK 68
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 69 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 117
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLA 202
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVK 68
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 69 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 117
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLA 202
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 103/193 (53%), Gaps = 20/193 (10%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T + A+K + + K T +RE+++L++L+H NI+ L EI+ D S S
Sbjct: 46 TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS----------S 95
Query: 230 FYLVFE-YMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
FY+V E Y +L + F+E + A I++Q+ G++Y HK N +HRD+K NIL+
Sbjct: 96 FYIVGELYTGGELFDEI-IKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILL 154
Query: 289 NNRG---EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
++ ++K+ DFGL+ + + + +++ T +Y PE+L G Y DVWS G
Sbjct: 155 ESKEKDCDIKIIDFGLSTCFQQNTKMK---DRIGTAYYIAPEVLRG--TYDEKCDVWSAG 209
Query: 346 CILGELFVKKPLF 358
IL L P F
Sbjct: 210 VILYILLSGTPPF 222
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 22/96 (22%)
Query: 40 LPLWHTIKPKKIHRRRLREEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHP 99
LP W TI A DL+ KML P RITA Q L+ W++
Sbjct: 243 LPQWRTI-----------------SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285
Query: 100 ESMPPPQLPTWQDCHELWSKKRRRQLRGDPMEMQAA 135
E+ LP+ + + RQ + + QAA
Sbjct: 286 ETPTISDLPSLES-----AMTNIRQFQAEKKLAQAA 316
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVK 68
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 69 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 117
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLA 202
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVK 68
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 69 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 117
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLA 202
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVK 68
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 69 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 117
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLA 202
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVK 69
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 70 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 118
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLA 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVK 68
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 69 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 117
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLA 202
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 24/170 (14%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFE-YMDHDLMG--LLESGMVD 251
E+ +L+QL+H NI+ L E F +DK ++YLV E Y +L +L
Sbjct: 71 EVAVLKQLDHPNIMKLYE----------FFEDKRNYYLVMEVYRGGELFDEIILRQ---K 117
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE---VKLADFGLARLYNAE 308
F+EV+ A IM+Q+L G +Y HK N +HRD+K N+L+ ++ +K+ DFGL+ +
Sbjct: 118 FSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG 177
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ + ++ T +Y PE+L ++Y DVWSCG IL L P F
Sbjct: 178 GKMK---ERLGTAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPF 222
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Query: 49 KKIHRRRLREEFSLMPPG-------ALDLLDKMLELDPERRITAEQALKSVWL 94
++I +R + +FS PP A L+ ML +P +RI+AE+AL W+
Sbjct: 228 QEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I + LNH+N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVK 68
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 69 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 117
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLA 202
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 103/193 (53%), Gaps = 20/193 (10%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T + A+K + + K T +RE+++L++L+H NI+ L EI+ D S S
Sbjct: 46 TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS----------S 95
Query: 230 FYLVFE-YMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
FY+V E Y +L + F+E + A I++Q+ G++Y HK N +HRD+K NIL+
Sbjct: 96 FYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILL 154
Query: 289 NNR---GEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
++ ++K+ DFGL+ + + + +++ T +Y PE+L G Y DVWS G
Sbjct: 155 ESKEKDCDIKIIDFGLSTCFQQNTKMK---DRIGTAYYIAPEVLRGT--YDEKCDVWSAG 209
Query: 346 CILGELFVKKPLF 358
IL L P F
Sbjct: 210 VILYILLSGTPPF 222
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPE 100
A DL+ KML P RITA Q L+ W++ E
Sbjct: 253 AKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSE 286
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 103/193 (53%), Gaps = 20/193 (10%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T + A+K + + K T +RE+++L++L+H NI+ L EI+ D S S
Sbjct: 46 TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS----------S 95
Query: 230 FYLVFE-YMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
FY+V E Y +L + F+E + A I++Q+ G++Y HK N +HRD+K NIL+
Sbjct: 96 FYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILL 154
Query: 289 NNR---GEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 345
++ ++K+ DFGL+ + + + +++ T +Y PE+L G Y DVWS G
Sbjct: 155 ESKEKDCDIKIIDFGLSTCFQQNTKMK---DRIGTAYYIAPEVLRG--TYDEKCDVWSAG 209
Query: 346 CILGELFVKKPLF 358
IL L P F
Sbjct: 210 VILYILLSGTPPF 222
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPE 100
A DL+ KML P RITA Q L+ W++ E
Sbjct: 253 AKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSE 286
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 48 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 99
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 100 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 155
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R T TL Y PPE++ G +
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHD 210
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPF 232
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 24/170 (14%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFE-YMDHDLMG--LLESGMVD 251
E+ +L+QL+H NI+ L E F +DK ++YLV E Y +L +L
Sbjct: 54 EVAVLKQLDHPNIMKLYE----------FFEDKRNYYLVMEVYRGGELFDEIILRQ---K 100
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE---VKLADFGLARLYNAE 308
F+EV+ A IM+Q+L G +Y HK N +HRD+K N+L+ ++ +K+ DFGL+ +
Sbjct: 101 FSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG 160
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ + ++ T +Y PE+L ++Y DVWSCG IL L P F
Sbjct: 161 GKMKE---RLGTAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPF 205
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Query: 49 KKIHRRRLREEFSLMPPG-------ALDLLDKMLELDPERRITAEQALKSVWL 94
++I +R + +FS PP A L+ ML +P +RI+AE+AL W+
Sbjct: 211 QEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L + F L L K +LE KEG REI+I L H NI+ +
Sbjct: 28 GNVYLAREKQNKFIMALKVLFKSQLE--KEGVEHQLRREIEIQSHLRHPNILRM------ 79
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
++ D+ YL+ E+ + F+E +A+ M +L D L YCH+R
Sbjct: 80 ----YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 135
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+LM +GE+K+ADFG + ++ R+R TL Y PPE++ G+ +
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCG---TLDYLPPEMIEGKT-HD 190
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+W G + E V P F
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L + F L L K +LE KEG REI+I L H NI+ +
Sbjct: 28 GNVYLAREKQNKFIMALKVLFKSQLE--KEGVEHQLRREIEIQSHLRHPNILRM------ 79
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
++ D+ YL+ E+ + F+E +A+ M +L D L YCH+R
Sbjct: 80 ----YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 135
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+LM +GE+K+ADFG + ++ R+R TL Y PPE++ G+ +
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCG---TLDYLPPEMIEGKT-HD 190
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+W G + E V P F
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPF 212
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ L G +V+ T+E VA+K V ++ + P +EI I LNH+N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINAMLNHENVVK 69
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
R++ YL EY +L +E + E + QL+ G+
Sbjct: 70 F----------YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGV 118
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
Y H HRDIK N+L++ R +K++DFGLA ++ +R+R TL Y PEL
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 329 LLGEERYGPAIDVWSCGCILGELFV 353
L E + +DVWSCG +L +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLA 203
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L + F L L K +LE KEG REI+I L H NI+ +
Sbjct: 29 GNVYLAREKQNKFIMALKVLFKSQLE--KEGVEHQLRREIEIQSHLRHPNILRM------ 80
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
++ D+ YL+ E+ + F+E +A+ M +L D L YCH+R
Sbjct: 81 ----YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 136
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+LM +GE+K+ADFG + ++ R+R TL Y PPE++ G+ +
Sbjct: 137 IHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCG---TLDYLPPEMIEGKT-HD 191
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+W G + E V P F
Sbjct: 192 EKVDLWCAGVLCYEFLVGMPPF 213
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 22 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 73
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 74 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R T+ TL Y PPE++ G +
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR--TDLCGTLDYLPPEMIEG-RMHD 184
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 27 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 78
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 79 ----YGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R T TL Y PPE++ G +
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHD 189
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 23 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 74
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 75 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R T+ TL Y PPE++ G +
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR--TDLCGTLDYLPPEMIEG-RMHD 185
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPF 207
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 27 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 78
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 79 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R T+ TL Y PPE++ G +
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR--TDLCGTLDYLPPEMIEG-RMHD 189
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPF 211
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 39 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 90
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 91 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 146
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R T TL Y PPE++ G +
Sbjct: 147 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHD 201
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPPF 223
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 22 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 73
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 74 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R T TL Y PPE++ G +
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHD 184
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 25 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 76
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 77 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R T TL Y PPE++ G +
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHD 187
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 22 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 73
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 74 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R T+ TL Y PPE++ G +
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR--TDLCGTLDYLPPEMIEG-RMHD 184
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 27 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 78
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 79 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R T TL Y PPE++ G +
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHD 189
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 22 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 73
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 74 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R T TL Y PPE++ G +
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR--TELCGTLDYLPPEMIEG-RMHD 184
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 21 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 72
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 73 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 128
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R T TL Y PPE++ G +
Sbjct: 129 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHD 183
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 184 EKVDLWSLGVLCYEFLVGKPPF 205
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 26 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 77
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 78 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 133
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R T TL Y PPE++ G +
Sbjct: 134 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHD 188
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 189 EKVDLWSLGVLCYEFLVGKPPF 210
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 25 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 76
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 77 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R T TL Y PPE++ G +
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHD 187
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 23 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 74
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 75 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R T TL Y PPE++ G +
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRR--TTLSGTLDYLPPEMIEG-RMHD 185
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 22 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 73
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 74 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R T TL Y PPE++ G +
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR--TXLCGTLDYLPPEMIEG-RMHD 184
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 27 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 78
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 79 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R T TL Y PPE + G +
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR--TTLCGTLDYLPPEXIEGRX-HD 189
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 48 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 99
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 100 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 155
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R + TL Y PPE++ G +
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR--DDLCGTLDYLPPEMIEG-RMHD 210
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPF 232
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 27 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 78
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 79 ----YGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + ++ R+ TL Y PPE++ G +
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLXG---TLDYLPPEMIEG-RMHD 189
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 25 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 76
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 77 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + ++ R+ TL Y PPE++ G +
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCG---TLDYLPPEMIEG-RMHD 187
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 16/187 (8%)
Query: 173 LVALKKV-RLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
++ALK + + + EK G RE++I L H NI+ L + D Y
Sbjct: 32 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----------YGYFHDATRVY 81
Query: 232 LVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR 291
L+ EY + + F+E A+ + +L + LSYCH + +HRDIK N+L+ +
Sbjct: 82 LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 141
Query: 292 GEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
GE+K+ADFG + +A +R T TL Y PPE++ G + +D+WS G + E
Sbjct: 142 GELKIADFGWS--VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 196
Query: 352 FVKKPLF 358
V KP F
Sbjct: 197 LVGKPPF 203
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 22 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 73
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 74 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + ++ R+ TL Y PPE++ G +
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCG---TLDYLPPEMIEG-RMHD 184
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPF 206
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 24 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 75
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 76 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 131
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+A+FG + +A +R T TL Y PPE++ G +
Sbjct: 132 IHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHD 186
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPF 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 24 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 75
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 76 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 131
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + ++ R+ TL Y PPE++ G +
Sbjct: 132 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCG---TLDYLPPEMIEG-RMHD 186
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPF 208
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 25 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 76
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 77 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+A+FG + +A +R T TL Y PPE++ G +
Sbjct: 133 IHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHD 187
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 23 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 74
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 75 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + ++ R+ TL Y PPE++ G +
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDTLCG---TLDYLPPEMIEG-RMHD 185
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 25 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 76
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 77 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R + TL Y PPE++ G +
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR--DDLCGTLDYLPPEMIEG-RMHD 187
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 22 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 73
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 74 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + ++ R+ TL Y PPE++ G +
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCG---TLDYLPPEMIEG-RMHD 184
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 22 GNVYLAREKNSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 73
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 74 ----YGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKV 129
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + ++ R+ TL Y PPE++ G +
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCG---TLDYLPPEMIEG-RMHD 184
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 25 GNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 76
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 77 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + ++ R+ TL Y PPE++ G +
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCG---TLDYLPPEMIEG-RMHD 187
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V KP F
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPF 209
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 96/209 (45%), Gaps = 25/209 (11%)
Query: 154 LAAGGLSLNNFSVSLFTDELVALKKV----RLENEKEGFPITAVREIKILRQLNHKNIVN 209
+ G F+ + E+VA+KK+ + NEK ++E++ L++L H N +
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQ---DIIKEVRFLQKLRHPNTIQ 118
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLS 269
R + A +LV EY LLE EV A++ L GL+
Sbjct: 119 YRGCYLREHTA----------WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLA 168
Query: 270 YCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELL 329
Y H N +HRD+K NIL++ G VKL DFG A + P V T ++ PE++
Sbjct: 169 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASI------MAPANXFVGTPYWMAPEVI 222
Query: 330 LG--EERYGPAIDVWSCGCILGELFVKKP 356
L E +Y +DVWS G EL +KP
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKP 251
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 96/209 (45%), Gaps = 25/209 (11%)
Query: 154 LAAGGLSLNNFSVSLFTDELVALKKV----RLENEKEGFPITAVREIKILRQLNHKNIVN 209
+ G F+ + E+VA+KK+ + NEK ++E++ L++L H N +
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQ---DIIKEVRFLQKLRHPNTIQ 79
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLS 269
R + A +LV EY LLE EV A++ L GL+
Sbjct: 80 YRGCYLREHTA----------WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLA 129
Query: 270 YCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELL 329
Y H N +HRD+K NIL++ G VKL DFG A + P V T ++ PE++
Sbjct: 130 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASI------MAPANXFVGTPYWMAPEVI 183
Query: 330 LG--EERYGPAIDVWSCGCILGELFVKKP 356
L E +Y +DVWS G EL +KP
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKP 212
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ + G + + + T + VA+K + RE++I++ LNH NIV
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLS 269
L E++ + + YLV EY + E + RQ++ +
Sbjct: 78 LFEVIETEK----------TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 270 YCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW----YRP 325
YCH++ +HRD+K N+L++ +K+ADFG + + + NK+ T Y
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-------FGNKLDTFCGSPPYAA 180
Query: 326 PELLLGEERYGPAIDVWSCGCILGEL 351
PEL G++ GP +DVWS G IL L
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTL 206
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 49 KKIHRRRLREEFSL---MPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPPP 105
K++ R LR ++ + M +LL K L L+P +R T EQ +K W+ H + P
Sbjct: 219 KELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
Query: 106 Q---LPTWQD 112
LP ++D
Sbjct: 279 YVAPLPDYKD 288
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ + G + + + T + VA+K + RE++I++ LNH NIV
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLS 269
L E++ + + YLV EY + E + RQ++ +
Sbjct: 78 LFEVIETEK----------TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 270 YCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW----YRP 325
YCH++ +HRD+K N+L++ +K+ADFG + + + NK+ T Y
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-------FGNKLDTFCGSPPYAA 180
Query: 326 PELLLGEERYGPAIDVWSCGCILGEL 351
PEL G++ GP +DVWS G IL L
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTL 206
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 49 KKIHRRRLREEFSL---MPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPPP 105
K++ R LR ++ + M +LL K L L+P +R T EQ +K W+ H + P
Sbjct: 219 KELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
Query: 106 Q---LPTWQD 112
LP ++D
Sbjct: 279 YVEPLPDYKD 288
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 26 GNVYLARERQSKFILALKVLFKTQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 77
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 78 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + +A +R T TL Y PPE++ G +
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHD 188
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V P F
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPF 210
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 34 WPAVIKLPLWHTIKPKKIHRRRLREEFSL---MPPGALDLLDKMLELDPERRITAEQALK 90
+ ++ +P + ++ +RR R EF+ + GA DL+ ++L+ + +R+T + L+
Sbjct: 201 YEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLE 260
Query: 91 SVWLK 95
W+K
Sbjct: 261 HPWIK 265
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 22/215 (10%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L E + G S+ V L T A K + + RE +I R L H NIV
Sbjct: 8 LYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVR 67
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD---FNEVNNASIMRQLLD 266
L + ++++ G YLVF+ + G L +V ++E + + ++Q+L+
Sbjct: 68 LHDSISEE----------GFHYLVFDLVT---GGELFEDIVAREYYSEADASHCIQQILE 114
Query: 267 GLSYCHKRNFLHRDIKCSNILMNNR---GEVKLADFGLARLYNAEDRQRPYTNKVITLWY 323
+ +CH+ +HRD+K N+L+ ++ VKLADFGLA + Q+ + T Y
Sbjct: 115 AVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGY 172
Query: 324 RPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
PE+L +E YG +D+W+CG IL L V P F
Sbjct: 173 LSPEVLR-KEAYGKPVDIWACGVILYILLVGYPPF 206
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 26/36 (72%)
Query: 59 EFSLMPPGALDLLDKMLELDPERRITAEQALKSVWL 94
E+ + P A +L+++ML ++P +RITA +ALK W+
Sbjct: 229 EWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWV 264
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ + G + + + T + VA++ + RE++I++ LNH NIV
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLS 269
L E++ + + YLV EY + E + RQ++ +
Sbjct: 78 LFEVIETEK----------TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 270 YCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW----YRP 325
YCH++ +HRD+K N+L++ +K+ADFG + + + NK+ T Y
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-------FGNKLDTFCGSPPYAA 180
Query: 326 PELLLGEERYGPAIDVWSCGCILGEL 351
PEL G++ GP +DVWS G IL L
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTL 206
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 49 KKIHRRRLREEFSL---MPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPPP 105
K++ R LR ++ + M +LL K L L+P +R T EQ +K W+ H + P
Sbjct: 219 KELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
Query: 106 Q---LPTWQD 112
LP ++D
Sbjct: 279 YVEPLPDYKD 288
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 83/163 (50%), Gaps = 22/163 (13%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMD-----HDLMGLLESG 248
RE I L H +IV L E T SD G Y+VFE+MD +++ ++G
Sbjct: 75 REASICHMLKHPHIVELLE--TYSSD--------GMLYMVFEFMDGADLCFEIVKRADAG 124
Query: 249 MVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM---NNRGEVKLADFGLARLY 305
V ++E + MRQ+L+ L YCH N +HRD+K N+L+ N VKL DFG+A
Sbjct: 125 FV-YSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA--I 181
Query: 306 NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
+ +V T + PE ++ E YG +DVW CG IL
Sbjct: 182 QLGESGLVAGGRVGTPHFMAPE-VVKREPYGKPVDVWGCGVIL 223
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 59 EFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLK 95
++S + A DL+ +ML LDP RIT +AL WLK
Sbjct: 255 QWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ + G + + + T + VA+K + RE++I++ LNH NIV
Sbjct: 11 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 70
Query: 210 LREIV-TDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGL 268
L E++ T+K+ L G VF+Y L+ G + E + RQ++ +
Sbjct: 71 LFEVIETEKTLYLVMEYASGG--EVFDY-------LVAHGWMKEKEAR--AKFRQIVSAV 119
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW----YR 324
YCH++ +HRD+K N+L++ +K+ADFG + + + NK+ T Y
Sbjct: 120 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-------FGNKLDTFCGSPPYA 172
Query: 325 PPELLLGEERYGPAIDVWSCGCILGEL 351
PEL G++ GP +DVWS G IL L
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTL 199
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 49 KKIHRRRLREEFSL---MPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPPP 105
K++ R LR ++ + M +LL K L L+P +R T EQ +K W+ H + P
Sbjct: 212 KELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 271
Query: 106 Q---LPTWQD 112
LP ++D
Sbjct: 272 YVEPLPDYKD 281
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ + G + + + T + VA+K + RE++I++ LNH NIV
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLS 269
L E++ + + YLV EY + E + RQ++ +
Sbjct: 78 LFEVIETEK----------TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 270 YCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW----YRP 325
YCH++ +HRD+K N+L++ +K+ADFG + + + NK+ Y
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-------FGNKLDAFCGAPPYAA 180
Query: 326 PELLLGEERYGPAIDVWSCGCILGEL 351
PEL G++ GP +DVWS G IL L
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTL 206
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 49 KKIHRRRLREEFSL---MPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPPP 105
K++ R LR ++ + M +LL K L L+P +R T EQ +K W+ H + P
Sbjct: 219 KELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
Query: 106 Q---LPTWQD 112
LP ++D
Sbjct: 279 YVEPLPDYKD 288
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 22/220 (10%)
Query: 145 NSSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNH 204
S L E L G S+ V + + A K + + RE +I R L H
Sbjct: 21 QSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 80
Query: 205 KNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD---FNEVNNASIM 261
NIV L + ++++ G YL+F+ + G L +V ++E + + +
Sbjct: 81 PNIVRLHDSISEE----------GHHYLIFDLVT---GGELFEDIVAREYYSEADASHCI 127
Query: 262 RQLLDGLSYCHKRNFLHRDIKCSNILMNNR---GEVKLADFGLARLYNAEDRQRPYTNKV 318
+Q+L+ + +CH+ +HRD+K N+L+ ++ VKLADFGLA E Q+ +
Sbjct: 128 QQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFA 185
Query: 319 ITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
T Y PE+L ++ YG +D+W+CG IL L V P F
Sbjct: 186 GTPGYLSPEVLR-KDPYGKPVDLWACGVILYILLVGYPPF 224
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 59 EFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLKN 96
E+ + P A DL++KML ++P +RITA +ALK W+ +
Sbjct: 247 EWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH 284
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 21/162 (12%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFN 253
RE++I++ LNH NIV L E++ + + YLV EY +
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEK----------TLYLVMEYASGGEVFDYLVAHGRMK 112
Query: 254 EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRP 313
E + RQ++ + YCH++ +HRD+K N+L++ +K+ADFG + +
Sbjct: 113 EKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTV------ 166
Query: 314 YTNKVITLW----YRPPELLLGEERYGPAIDVWSCGCILGEL 351
NK+ T Y PEL G++ GP +DVWS G IL L
Sbjct: 167 -GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 207
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ + G + + + T VA+K + RE++I++ LNH NIV
Sbjct: 16 LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVK 75
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLS 269
L E++ + + YL+ EY + E S RQ++ +
Sbjct: 76 LFEVIETEK----------TLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ 125
Query: 270 YCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELL 329
YCH++ +HRD+K N+L++ +K+ADFG + + + + + Y PEL
Sbjct: 126 YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCG---SPPYAAPELF 182
Query: 330 LGEERYGPAIDVWSCGCIL 348
G++ GP +DVWS G IL
Sbjct: 183 QGKKYDGPEVDVWSLGVIL 201
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 49 KKIHRRRLREEFSL---MPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPPP 105
K++ R LR ++ + M +LL + L L+P +R T EQ +K W+ H E P
Sbjct: 217 KELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKP 276
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 157 GGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTD 216
G + L S F L L K +LE K G RE++I L H NI+ L
Sbjct: 26 GNVYLARERQSKFILALKVLFKTQLE--KAGVEHQLRREVEIQSHLRHPNILRL------ 77
Query: 217 KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNF 276
+ D YL+ EY + + F+E A+ + +L + LSYCH +
Sbjct: 78 ----YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRDIK N+L+ + GE+K+ADFG + ++ R+ TL Y PPE++ G +
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRDTLCG---TLDYLPPEMIEG-RMHD 188
Query: 337 PAIDVWSCGCILGELFVKKPLF 358
+D+WS G + E V P F
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPF 210
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 34 WPAVIKLPLWHTIKPKKIHRRRLREEFSL---MPPGALDLLDKMLELDPERRITAEQALK 90
+ ++ +P + ++ +RR R EF+ + GA DL+ ++L+ + +R+T + L+
Sbjct: 201 YEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLE 260
Query: 91 SVWLK 95
W+K
Sbjct: 261 HPWIK 265
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ + G + + + T VA+K + RE++I++ LNH NIV
Sbjct: 19 LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVK 78
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLS 269
L E++ + + YL+ EY + E S RQ++ +
Sbjct: 79 LFEVIETEK----------TLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ 128
Query: 270 YCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELL 329
YCH++ +HRD+K N+L++ +K+ADFG + + + + Y PEL
Sbjct: 129 YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCG---APPYAAPELF 185
Query: 330 LGEERYGPAIDVWSCGCILGEL 351
G++ GP +DVWS G IL L
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTL 207
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 49 KKIHRRRLREEFSL---MPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPPP 105
K++ R LR ++ + M +LL + L L+P +R T EQ +K W+ H E P
Sbjct: 220 KELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKP 279
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 22/176 (12%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVD 251
V E+ +LR+L H NIV + + D+++ + Y+V EY + DL ++ G +
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNT--------TLYIVMEYCEGGDLASVITKGTKE 104
Query: 252 FNEVNNASIMR---QLLDGLSYCHKRN-----FLHRDIKCSNILMNNRGEVKLADFGLAR 303
++ ++R QL L CH+R+ LHRD+K +N+ ++ + VKL DFGLAR
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164
Query: 304 LYNA-EDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ N ED + + V T +Y PE + Y D+WS GC+L EL P F
Sbjct: 165 ILNHDEDFAKEF---VGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ + G + + + T + VA++ + RE++I++ LNH NIV
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLS 269
L E++ + + YLV EY + E + RQ++ +
Sbjct: 78 LFEVIETEK----------TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 270 YCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELL 329
YCH++ +HRD+K N+L++ +K+ADFG + + ++ + + Y PEL
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCG---SPPYAAPELF 184
Query: 330 LGEERYGPAIDVWSCGCILGEL 351
G++ GP +DVWS G IL L
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTL 206
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 49 KKIHRRRLREEFSL---MPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPPP 105
K++ R LR ++ + M +LL K L L+P +R T EQ +K W+ H + P
Sbjct: 219 KELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
Query: 106 Q---LPTWQD 112
LP ++D
Sbjct: 279 YVEPLPDYKD 288
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ + G + + + T + VA+K + RE++I + LNH NIV
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVK 77
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLS 269
L E++ + + YLV EY + E + RQ++ +
Sbjct: 78 LFEVIETEK----------TLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQ 127
Query: 270 YCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW----YRP 325
YCH++ +HRD+K N+L++ +K+ADFG + + + NK+ Y
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFT-------FGNKLDAFCGAPPYAA 180
Query: 326 PELLLGEERYGPAIDVWSCGCILGEL 351
PEL G++ GP +DVWS G IL L
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTL 206
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 111/249 (44%), Gaps = 43/249 (17%)
Query: 143 TNNSSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQL 202
T++ L + L G + + + + ALKKV + P RE+ I++ L
Sbjct: 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQD------PRYKNRELDIMKVL 57
Query: 203 NHKNIVNLREIVTDKSDAL--------DFRKDKGS--------------------FYLVF 234
+H NI+ L + D D K G ++
Sbjct: 58 DHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIM 117
Query: 235 EYMDHDLMGLLESGMVDFNEV--NNASI-MRQLLDGLSYCHKRNFLHRDIKCSNILMNNR 291
EY+ L +L+S + + N SI + QL + + H HRDIK N+L+N++
Sbjct: 118 EYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSK 177
Query: 292 -GEVKLADFGLAR-LYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILG 349
+KL DFG A+ L +E P + + +YR PEL+LG Y P+ID+WS GC+ G
Sbjct: 178 DNTLKLCDFGSAKKLIPSE----PSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFG 233
Query: 350 ELFVKKPLF 358
EL + KPLF
Sbjct: 234 ELILGKPLF 242
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 22/215 (10%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L E L G S+ + + T + A K + + RE +I R L H NIV
Sbjct: 8 LFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVR 67
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD---FNEVNNASIMRQLLD 266
L + ++++ G YLVF+ + G L +V ++E + + ++Q+L+
Sbjct: 68 LHDSISEE----------GFHYLVFDLVTG---GELFEDIVAREYYSEADASHCIQQILE 114
Query: 267 GLSYCHKRNFLHRDIKCSNILMNNRGE---VKLADFGLARLYNAEDRQRPYTNKVITLWY 323
+++CH +HRD+K N+L+ ++ + VKLADFGLA + Q+ + T Y
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGY 172
Query: 324 RPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
PE+L ++ YG +D+W+CG IL L V P F
Sbjct: 173 LSPEVLR-KDPYGKPVDMWACGVILYILLVGYPPF 206
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 59 EFSLMPPGALDLLDKMLELDPERRITAEQALKSVWL 94
E+ + P A DL++KML ++P +RITA +ALK W+
Sbjct: 229 EWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 22/215 (10%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L E L G S+ + + T + A K + + RE +I R L H NIV
Sbjct: 8 LFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVR 67
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD---FNEVNNASIMRQLLD 266
L + ++++ G YLVF+ + G L +V ++E + + ++Q+L+
Sbjct: 68 LHDSISEE----------GFHYLVFDLVTG---GELFEDIVAREYYSEADASHCIQQILE 114
Query: 267 GLSYCHKRNFLHRDIKCSNILMNNRGE---VKLADFGLARLYNAEDRQRPYTNKVITLWY 323
+++CH +HRD+K N+L+ ++ + VKLADFGLA + Q+ + T Y
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGY 172
Query: 324 RPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
PE+L ++ YG +D+W+CG IL L V P F
Sbjct: 173 LSPEVLR-KDPYGKPVDMWACGVILYILLVGYPPF 206
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 59 EFSLMPPGALDLLDKMLELDPERRITAEQALKSVWL 94
E+ + P A DL++KML ++P +RITA +ALK W+
Sbjct: 229 EWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 152 EPLAAGGLSLNNFSVSLFTDELVALKKV-RLENEKEGFPITAVREIKILRQLNHKNIVNL 210
E L G + T + VALK + R +K + REI L+ L H +I+ L
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 211 REIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
+++T +D + +V EY +L + E +Q++ + Y
Sbjct: 75 YDVITTPTDIV----------MVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICAIEY 123
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
CH+ +HRD+K N+L+++ VK+ADFGL+ + + + + Y PE++
Sbjct: 124 CHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAAPEVIN 180
Query: 331 GEERYGPAIDVWSCGCILGELFVKK 355
G+ GP +DVWSCG +L + V +
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGR 205
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 62 LMPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
+ PGA L+ +M+ DP +RIT ++ + W P+ + P
Sbjct: 230 FLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRP 272
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVD 251
V E+ +LR+L H NIV + + D+++ + Y+V EY + DL ++ G +
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNT--------TLYIVMEYCEGGDLASVITKGTKE 104
Query: 252 FNEVNNASIMR---QLLDGLSYCHKRN-----FLHRDIKCSNILMNNRGEVKLADFGLAR 303
++ ++R QL L CH+R+ LHRD+K +N+ ++ + VKL DFGLAR
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164
Query: 304 LYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ N + V T +Y PE + Y D+WS GC+L EL P F
Sbjct: 165 ILNHDTSFAK--TFVGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALK----KVRLENEKEGFPITAVREIKILRQLNHK 205
+++ L G + T + VALK KV +++ +G REI LR L H
Sbjct: 8 IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG---RIEREISYLRLLRHP 64
Query: 206 NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLL 265
+I+ L +++ K K +V EY ++L + +E +Q++
Sbjct: 65 HIIKLYDVI----------KSKDEIIMVIEYAGNELFDYIVQ-RDKMSEQEARRFFQQII 113
Query: 266 DGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRP 325
+ YCH+ +HRD+K N+L++ VK+ADFGL+ + + + + Y
Sbjct: 114 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAA 170
Query: 326 PELLLGEERYGPAIDVWSCGCILGELFVKK 355
PE++ G+ GP +DVWSCG IL + ++
Sbjct: 171 PEVISGKLYAGPEVDVWSCGVILYVMLCRR 200
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 62 LMPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
+ PGA L+ +ML ++P RI+ + ++ W K PE + PP L
Sbjct: 225 FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYLLPPDL 270
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALK----KVRLENEKEGFPITAVREIKILRQLNHK 205
+++ L G + T + VALK KV +++ +G REI LR L H
Sbjct: 18 IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG---RIEREISYLRLLRHP 74
Query: 206 NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLL 265
+I+ L +++ K K +V EY ++L + +E +Q++
Sbjct: 75 HIIKLYDVI----------KSKDEIIMVIEYAGNELFDYIVQ-RDKMSEQEARRFFQQII 123
Query: 266 DGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRP 325
+ YCH+ +HRD+K N+L++ VK+ADFGL+ + + + + Y
Sbjct: 124 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAA 180
Query: 326 PELLLGEERYGPAIDVWSCGCILGELFVKK 355
PE++ G+ GP +DVWSCG IL + ++
Sbjct: 181 PEVISGKLYAGPEVDVWSCGVILYVMLCRR 210
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 62 LMPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESM 102
+ PGA L+ +ML ++P RI+ + ++ W K PE +
Sbjct: 235 FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYL 275
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALK----KVRLENEKEGFPITAVREIKILRQLNHK 205
+++ L G + T + VALK KV +++ +G REI LR L H
Sbjct: 17 IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG---RIEREISYLRLLRHP 73
Query: 206 NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLL 265
+I+ L +++ K K +V EY ++L + +E +Q++
Sbjct: 74 HIIKLYDVI----------KSKDEIIMVIEYAGNELFDYIVQ-RDKMSEQEARRFFQQII 122
Query: 266 DGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRP 325
+ YCH+ +HRD+K N+L++ VK+ADFGL+ + + + + Y
Sbjct: 123 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAA 179
Query: 326 PELLLGEERYGPAIDVWSCGCILGELFVKK 355
PE++ G+ GP +DVWSCG IL + ++
Sbjct: 180 PEVISGKLYAGPEVDVWSCGVILYVMLCRR 209
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 62 LMPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESM 102
+ PGA L+ +ML ++P RI+ + ++ W K PE +
Sbjct: 234 FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYL 274
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALK----KVRLENEKEGFPITAVREIKILRQLNHK 205
+++ L G + T + VALK KV +++ +G REI LR L H
Sbjct: 12 IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG---RIEREISYLRLLRHP 68
Query: 206 NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLL 265
+I+ L +++ K K +V EY ++L + +E +Q++
Sbjct: 69 HIIKLYDVI----------KSKDEIIMVIEYAGNELFDYIVQ-RDKMSEQEARRFFQQII 117
Query: 266 DGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRP 325
+ YCH+ +HRD+K N+L++ VK+ADFGL+ + + + + Y
Sbjct: 118 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAA 174
Query: 326 PELLLGEERYGPAIDVWSCGCILGELFVKK 355
PE++ G+ GP +DVWSCG IL + ++
Sbjct: 175 PEVISGKLYAGPEVDVWSCGVILYVMLCRR 204
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 62 LMPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
+ PGA L+ +ML ++P RI+ + ++ W K PE + PP L
Sbjct: 229 FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYLLPPDL 274
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 22/176 (12%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVD 251
V E+ +LR+L H NIV + + D+++ + Y+V EY + DL ++ G +
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNT--------TLYIVMEYCEGGDLASVITKGTKE 104
Query: 252 FNEVNNASIMR---QLLDGLSYCHKRN-----FLHRDIKCSNILMNNRGEVKLADFGLAR 303
++ ++R QL L CH+R+ LHRD+K +N+ ++ + VKL DFGLAR
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164
Query: 304 LYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ N + + + T +Y PE + Y D+WS GC+L EL P F
Sbjct: 165 ILNHDT---SFAKAFVGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 19/218 (8%)
Query: 145 NSSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRLE-NEKEGFPITAVREIKILRQLN 203
N +++ L GG+S + + VA+K + + EKE RE+ QL+
Sbjct: 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLS 69
Query: 204 HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES-GMVDFNEVNNASIM 261
H+NIV++ +D ++ +YLV EY++ L +ES G + + N +
Sbjct: 70 HQNIVSM----------IDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFT-- 117
Query: 262 RQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-T 320
Q+LDG+ + H +HRDIK NIL+++ +K+ DFG+A+ + + TN V+ T
Sbjct: 118 NQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS--ETSLTQTNHVLGT 175
Query: 321 LWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ Y PE GE D++S G +L E+ V +P F
Sbjct: 176 VQYFSPEQAKGEAT-DECTDIYSIGIVLYEMLVGEPPF 212
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 27/173 (15%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLM--GLLESGMVD 251
RE +I R+L H NIV L + + ++S F Y+ DL+ G L +V
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEES---------------FHYLVFDLVTGGELFEDIVA 98
Query: 252 ---FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE---VKLADFGLARLY 305
++E + + ++Q+L+ ++YCH +HR++K N+L+ ++ + VKLADFGLA
Sbjct: 99 REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158
Query: 306 NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
N + + T Y PE +L ++ Y +D+W+CG IL L V P F
Sbjct: 159 NDSEAWHGFAG---TPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPF 207
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 59 EFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLKN 96
E+ + P A L+D ML ++P++RITA+QALK W+ N
Sbjct: 230 EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 267
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 27/173 (15%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLM--GLLESGMVD 251
RE +I R+L H NIV L + + ++S F Y+ DL+ G L +V
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEES---------------FHYLVFDLVTGGELFEDIVA 98
Query: 252 ---FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE---VKLADFGLARLY 305
++E + + ++Q+L+ ++YCH +HR++K N+L+ ++ + VKLADFGLA
Sbjct: 99 REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158
Query: 306 NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
N + + T Y PE +L ++ Y +D+W+CG IL L V P F
Sbjct: 159 NDSEAWHGFAG---TPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPF 207
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 59 EFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLKN 96
E+ + P A L+D ML ++P++RITA+QALK W+ N
Sbjct: 230 EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 267
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD-- 251
+EI+I++ L+H NI+ L E D +D YLV E G L +V
Sbjct: 55 QEIEIMKSLDHPNIIRLYETFEDNTD----------IYLVMELCTG---GELFERVVHKR 101
Query: 252 -FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM---NNRGEVKLADFGLARLYNA 307
F E + A IM+ +L ++YCHK N HRD+K N L + +KL DFGLA +
Sbjct: 102 VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161
Query: 308 EDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
R KV T +Y P++L G YGP D WS G ++ L P F
Sbjct: 162 GKMMR---TKVGTPYYVSPQVLEG--LYGPECDEWSAGVMMYVLLCGYPPF 207
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD-- 251
+EI+I++ L+H NI+ L E D +D YLV E G L +V
Sbjct: 72 QEIEIMKSLDHPNIIRLYETFEDNTD----------IYLVMELCTG---GELFERVVHKR 118
Query: 252 -FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM---NNRGEVKLADFGLARLYNA 307
F E + A IM+ +L ++YCHK N HRD+K N L + +KL DFGLA +
Sbjct: 119 VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 178
Query: 308 EDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
R KV T +Y P++L G YGP D WS G ++ L P F
Sbjct: 179 GKMMR---TKVGTPYYVSPQVLEG--LYGPECDEWSAGVMMYVLLCGYPPF 224
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 27/173 (15%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLM--GLLESGMVD 251
RE +I R+L H NIV L + + ++S F Y+ DL+ G L +V
Sbjct: 77 REARICRKLQHPNIVRLHDSIQEES---------------FHYLVFDLVTGGELFEDIVA 121
Query: 252 ---FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE---VKLADFGLARLY 305
++E + + ++Q+L+ ++YCH +HR++K N+L+ ++ + VKLADFGLA
Sbjct: 122 REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181
Query: 306 NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
N + + T Y PE +L ++ Y +D+W+CG IL L V P F
Sbjct: 182 NDSEAWHGFAG---TPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPF 230
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 59 EFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLKN 96
E+ + P A L+D ML ++P++RITA+QALK W+ N
Sbjct: 253 EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 290
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 27/173 (15%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLM--GLLESGMVD 251
RE +I R+L H NIV L + + ++S F Y+ DL+ G L +V
Sbjct: 53 REARICRKLQHPNIVRLHDSIQEES---------------FHYLVFDLVTGGELFEDIVA 97
Query: 252 ---FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE---VKLADFGLARLY 305
++E + + ++Q+L+ ++YCH +HR++K N+L+ ++ + VKLADFGLA
Sbjct: 98 REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 157
Query: 306 NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
N + + T Y PE +L ++ Y +D+W+CG IL L V P F
Sbjct: 158 NDSEAWHGFAG---TPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPF 206
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 59 EFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLKN 96
E+ + P A L+D ML ++P++RITA+QALK W+ N
Sbjct: 229 EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 266
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 96/187 (51%), Gaps = 16/187 (8%)
Query: 173 LVALKKV-RLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
+VALK + + + EKEG REI+I L+H NI+ L ++ D+ Y
Sbjct: 50 IVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRL----------YNYFYDRRRIY 99
Query: 232 LVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR 291
L+ EY + F+E A+IM +L D L YCH + +HRDIK N+L+ +
Sbjct: 100 LILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLK 159
Query: 292 GEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
GE+K+ADFG + ++ R++ TL Y PPE++ G + +D+W G + EL
Sbjct: 160 GELKIADFGWS-VHAPSLRRKTMCG---TLDYLPPEMIEG-RMHNEKVDLWCIGVLCYEL 214
Query: 352 FVKKPLF 358
V P F
Sbjct: 215 LVGNPPF 221
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 63 MPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQLPT 109
+P GA DL+ K+L +P R+ Q W++ +PP L +
Sbjct: 244 VPTGAQDLISKLLRHNPSERLPLAQVSAHPWVRANSRRVLPPSALQS 290
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 104/216 (48%), Gaps = 12/216 (5%)
Query: 142 STNNSSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQ 201
S N L E + +G ++ + E VA+K++ LE + ++EI+ + Q
Sbjct: 6 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAMSQ 64
Query: 202 LNHKNIVNLREIVTDKSDALDFRK--DKGSFYLVFEYMDHDLM-GLLESGMVDFNEVNNA 258
+H NIV+ K + K GS V + + H + G +SG++D E A
Sbjct: 65 CHHPNIVSYYTSFVVKDELWLVMKLLSGGS---VLDIIKHIVAKGEHKSGVLD--ESTIA 119
Query: 259 SIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGL-ARLYNAEDRQRPYTNK 317
+I+R++L+GL Y HK +HRD+K NIL+ G V++ADFG+ A L D R K
Sbjct: 120 TILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 179
Query: 318 --VITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
V T + PE++ Y D+WS G EL
Sbjct: 180 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 215
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 81/163 (49%), Gaps = 22/163 (13%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMD-----HDLMGLLESG 248
RE I L H +IV L E T SD G Y+VFE+MD +++ ++G
Sbjct: 77 REASICHMLKHPHIVELLE--TYSSD--------GMLYMVFEFMDGADLCFEIVKRADAG 126
Query: 249 MVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM---NNRGEVKLADFGLARLY 305
V ++E + MRQ+L+ L YCH N +HRD+K +L+ N VKL FG+A
Sbjct: 127 FV-YSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--I 183
Query: 306 NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
+ +V T + PE ++ E YG +DVW CG IL
Sbjct: 184 QLGESGLVAGGRVGTPHFMAPE-VVKREPYGKPVDVWGCGVIL 225
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 59 EFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLK 95
++S + A DL+ +ML LDP RIT +AL WLK
Sbjct: 257 QWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 104/216 (48%), Gaps = 12/216 (5%)
Query: 142 STNNSSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQ 201
S N L E + +G ++ + E VA+K++ LE + ++EI+ + Q
Sbjct: 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAMSQ 69
Query: 202 LNHKNIVNLREIVTDKSDALDFRK--DKGSFYLVFEYMDHDLM-GLLESGMVDFNEVNNA 258
+H NIV+ K + K GS V + + H + G +SG++D E A
Sbjct: 70 CHHPNIVSYYTSFVVKDELWLVMKLLSGGS---VLDIIKHIVAKGEHKSGVLD--ESTIA 124
Query: 259 SIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGL-ARLYNAEDRQRPYTNK 317
+I+R++L+GL Y HK +HRD+K NIL+ G V++ADFG+ A L D R K
Sbjct: 125 TILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 184
Query: 318 --VITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
V T + PE++ Y D+WS G EL
Sbjct: 185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 220
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 22/215 (10%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L E L G S+ V + + A + + RE +I R L H NIV
Sbjct: 15 LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVR 74
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD---FNEVNNASIMRQLLD 266
L + ++++ G YL+F+ + G L +V ++E + + ++Q+L+
Sbjct: 75 LHDSISEE----------GHHYLIFDLVT---GGELFEDIVAREYYSEADASHCIQQILE 121
Query: 267 GLSYCHKRNFLHRDIKCSNILMNNR---GEVKLADFGLARLYNAEDRQRPYTNKVITLWY 323
+ +CH+ +HR++K N+L+ ++ VKLADFGLA E Q+ + T Y
Sbjct: 122 AVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGY 179
Query: 324 RPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
PE+L ++ YG +D+W+CG IL L V P F
Sbjct: 180 LSPEVLR-KDPYGKPVDLWACGVILYILLVGYPPF 213
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 59 EFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLKN 96
E+ + P A DL++KML ++P +RITA +ALK W+ +
Sbjct: 236 EWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH 273
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 17/168 (10%)
Query: 194 REIKILRQLNHK-NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDF 252
REIKIL L NI+ L +IV D + LVFE++++ L + D+
Sbjct: 80 REIKILENLRGGPNIITLADIVKDPVSR--------TPALVFEHVNNTDFKQLYQTLTDY 131
Query: 253 NEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRG-EVKLADFGLARLYNAEDRQ 311
+ M ++L L YCH +HRD+K N+++++ +++L D+GLA Y+
Sbjct: 132 D---IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---G 185
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL-FVKKPLF 358
+ Y +V + +++ PELL+ + Y ++D+WS GC+L + F K+P F
Sbjct: 186 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 52 HRRRLREEF------SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
H R+ E F L+ P ALD LDK+L D + R+TA +A++ + V
Sbjct: 276 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 81/163 (49%), Gaps = 22/163 (13%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMD-----HDLMGLLESG 248
RE I L H +IV L E T SD G Y+VFE+MD +++ ++G
Sbjct: 75 REASICHMLKHPHIVELLE--TYSSD--------GMLYMVFEFMDGADLCFEIVKRADAG 124
Query: 249 MVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM---NNRGEVKLADFGLARLY 305
V ++E + MRQ+L+ L YCH N +HRD+K +L+ N VKL FG+A
Sbjct: 125 FV-YSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--I 181
Query: 306 NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
+ +V T + PE ++ E YG +DVW CG IL
Sbjct: 182 QLGESGLVAGGRVGTPHFMAPE-VVKREPYGKPVDVWGCGVIL 223
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 59 EFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLK 95
++S + A DL+ +ML LDP RIT +AL WLK
Sbjct: 255 QWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 77/129 (59%), Gaps = 8/129 (6%)
Query: 232 LVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR 291
LVFEY+++ L + DF+ M +LL L YCH + +HRD+K N++++++
Sbjct: 112 LVFEYINNTDFKQLYQILTDFD---IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 168
Query: 292 -GEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGE 350
+++L D+GLA Y+ + Y +V + +++ PELL+ + Y ++D+WS GC+L
Sbjct: 169 QKKLRLIDWGLAEFYHPA---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 225
Query: 351 L-FVKKPLF 358
+ F ++P F
Sbjct: 226 MIFRREPFF 234
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 52 HRRRLREEF------SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
H R+ E F L+ P ALDLLDK+L D ++R+TA++A++ + V E P
Sbjct: 277 HSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQSQP 335
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 17/161 (10%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLM--GLLESGMVD 251
REI+ L+ H +I+ L ++++ +D F++V EY+ + + + G V+
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTD----------FFMVMEYVSGGELFDYICKHGRVE 109
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
E+ + +Q+L + YCH+ +HRD+K N+L++ K+ADFGL+ + + +
Sbjct: 110 --EMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 167
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
R + Y PE++ G GP +D+WSCG IL L
Sbjct: 168 RTSCG---SPNYAAPEVISGRLYAGPEVDIWSCGVILYALL 205
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 77/129 (59%), Gaps = 8/129 (6%)
Query: 232 LVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR 291
LVFEY+++ L + DF+ M +LL L YCH + +HRD+K N++++++
Sbjct: 117 LVFEYINNTDFKQLYQILTDFD---IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 173
Query: 292 -GEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGE 350
+++L D+GLA Y+ + Y +V + +++ PELL+ + Y ++D+WS GC+L
Sbjct: 174 QKKLRLIDWGLAEFYHPA---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 230
Query: 351 L-FVKKPLF 358
+ F ++P F
Sbjct: 231 MIFRREPFF 239
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Query: 52 HRRRLREEF------SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
H R+ E F L+ P ALDLLDK+L D ++R+TA++A++ + V
Sbjct: 282 HSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPV 333
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLM--GLLESGMVD 251
REI+ L+ H +I+ L ++++ +D F++V EY+ + + + G V+
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTD----------FFMVMEYVSGGELFDYICKHGRVE 109
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
E+ + +Q+L + YCH+ +HRD+K N+L++ K+ADFGL+ + + +
Sbjct: 110 --EMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 167
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
R + + Y PE++ G GP +D+WSCG IL L
Sbjct: 168 R---DSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALL 205
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 117/271 (43%), Gaps = 42/271 (15%)
Query: 95 KNVHPESM-PPPQLPTWQDCHELWSKKRRRQLRGDPMEMQAAAPIQSNSTNNSSRPLMEP 153
+N++ +SM P +LP W E + K + + G + + + + + +ME
Sbjct: 70 ENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEV 129
Query: 154 LAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQL-NHKNIVNLRE 212
A L +LE +E RE ILRQ+ H +I+ L
Sbjct: 130 TAE------------------RLSPEQLEEVREA----TRRETHILRQVAGHPHIITL-- 165
Query: 213 IVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCH 272
+D + +LVF+ M + + V +E SIMR LL+ +S+ H
Sbjct: 166 --------IDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLH 217
Query: 273 KRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELL--- 329
N +HRD+K NIL+++ +++L+DFG + ++ R T Y PE+L
Sbjct: 218 ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCG---TPGYLAPEILKCS 274
Query: 330 LGEER--YGPAIDVWSCGCILGELFVKKPLF 358
+ E YG +D+W+CG IL L P F
Sbjct: 275 MDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 69 DLLDKMLELDPERRITAEQALKSVWLK 95
DL+ ++L++DPE R+TAEQAL+ + +
Sbjct: 338 DLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 26/244 (10%)
Query: 127 GDPMEMQAAAPIQSNSTNNSSRPLMEPLAA-GGLSLNNFSVSLFTDELVALKKVRLENEK 185
G M + AAA S R +E +A G T VA+KKV +
Sbjct: 3 GSMMSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD--- 59
Query: 186 EGFPITAVREIKILRQL---NHKNIVNLREIVTDKSDALDFRKDKGSFYL--VFEYMDHD 240
P RE++I++ L +H NIV L+ + +D+ YL V EY+
Sbjct: 60 ---PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE-----RDRRDIYLNVVMEYVPDT 111
Query: 241 LMGLLES---GMVDFNEVNNASIMRQLLDGLSYCH--KRNFLHRDIKCSNILMNNR-GEV 294
L + V + + QL+ + H N HRDIK N+L+N G +
Sbjct: 112 LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTL 171
Query: 295 KLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
KL DFG A+ + + P + + +YR PEL+ G + Y A+D+WS GCI E+ +
Sbjct: 172 KLCDFGSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
Query: 355 KPLF 358
+P+F
Sbjct: 229 EPIF 232
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 22/171 (12%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD-- 251
RE +I R L H NIV L + ++++ G YLVF+ + G L +V
Sbjct: 79 REARICRLLKHPNIVRLHDSISEE----------GFHYLVFDLVT---GGELFEDIVARE 125
Query: 252 -FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR---GEVKLADFGLARLYNA 307
++E + + + Q+L+ +++ H+ + +HRD+K N+L+ ++ VKLADFGLA
Sbjct: 126 YYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA--IEV 183
Query: 308 EDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ Q+ + T Y PE+L ++ YG +D+W+CG IL L V P F
Sbjct: 184 QGEQQAWFGFAGTPGYLSPEVLR-KDPYGKPVDIWACGVILYILLVGYPPF 233
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 59 EFSLMPPGALDLLDKMLELDPERRITAEQALKSVWL 94
E+ + P A +L+++ML ++P +RITA+QALK W+
Sbjct: 256 EWDTVTPEAKNLINQMLTINPAKRITADQALKHPWV 291
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 15/187 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+KK L++ E REI+IL+ L H NIV + + + + +
Sbjct: 41 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC--------YSAGRRN 90
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
L+ EY+ + L L++ + + Q+ G+ Y + ++HRD+ NIL+
Sbjct: 91 LKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 150
Query: 289 NNRGEVKLADFGLARLY--NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
N VK+ DFGL ++ + E + + WY P L E ++ A DVWS G
Sbjct: 151 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGV 208
Query: 347 ILGELFV 353
+L ELF
Sbjct: 209 VLYELFT 215
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 87/155 (56%), Gaps = 16/155 (10%)
Query: 206 NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLL 265
NIV L +IV D+ + L+FEY+++ +L + D++ + +LL
Sbjct: 87 NIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTDYDI---RYYIYELL 135
Query: 266 DGLSYCHKRNFLHRDIKCSNILMNNR-GEVKLADFGLARLYNAEDRQRPYTNKVITLWYR 324
L YCH + +HRD+K N+++++ +++L D+GLA Y+ + Y +V + +++
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP---GKEYNVRVASRYFK 192
Query: 325 PPELLLGEERYGPAIDVWSCGCIL-GELFVKKPLF 358
PELL+ + Y ++D+WS GC+ G +F K+P F
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 227
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 62 LMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
L+ P A+D LDK+L D + R+TA +A+ + + V
Sbjct: 286 LVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 87/155 (56%), Gaps = 16/155 (10%)
Query: 206 NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLL 265
NIV L +IV D+ + L+FEY+++ +L + D++ + +LL
Sbjct: 108 NIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTDYDI---RYYIYELL 156
Query: 266 DGLSYCHKRNFLHRDIKCSNILMNNR-GEVKLADFGLARLYNAEDRQRPYTNKVITLWYR 324
L YCH + +HRD+K N+++++ +++L D+GLA Y+ + Y +V + +++
Sbjct: 157 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP---GKEYNVRVASRYFK 213
Query: 325 PPELLLGEERYGPAIDVWSCGCIL-GELFVKKPLF 358
PELL+ + Y ++D+WS GC+ G +F K+P F
Sbjct: 214 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 248
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 62 LMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
L+ P A+D LDK+L D + R+TA +A+ + + V
Sbjct: 307 LVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 342
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 87/155 (56%), Gaps = 16/155 (10%)
Query: 206 NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLL 265
NIV L +IV D+ + L+FEY+++ +L + D++ + +LL
Sbjct: 88 NIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTDYDI---RYYIYELL 136
Query: 266 DGLSYCHKRNFLHRDIKCSNILMNNR-GEVKLADFGLARLYNAEDRQRPYTNKVITLWYR 324
L YCH + +HRD+K N+++++ +++L D+GLA Y+ + Y +V + +++
Sbjct: 137 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP---GKEYNVRVASRYFK 193
Query: 325 PPELLLGEERYGPAIDVWSCGCIL-GELFVKKPLF 358
PELL+ + Y ++D+WS GC+ G +F K+P F
Sbjct: 194 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 228
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 62 LMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
L+ P A+D LDK+L D + R+TA +A+ + + V
Sbjct: 287 LVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 322
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 87/155 (56%), Gaps = 16/155 (10%)
Query: 206 NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLL 265
NIV L +IV D+ + L+FEY+++ +L + D++ + +LL
Sbjct: 87 NIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTDYDI---RYYIYELL 135
Query: 266 DGLSYCHKRNFLHRDIKCSNILMNNR-GEVKLADFGLARLYNAEDRQRPYTNKVITLWYR 324
L YCH + +HRD+K N+++++ +++L D+GLA Y+ + Y +V + +++
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP---GKEYNVRVASRYFK 192
Query: 325 PPELLLGEERYGPAIDVWSCGCIL-GELFVKKPLF 358
PELL+ + Y ++D+WS GC+ G +F K+P F
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 227
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 62 LMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
L+ P A+D LDK+L D + R+TA +A+ + + V
Sbjct: 286 LVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 87/155 (56%), Gaps = 16/155 (10%)
Query: 206 NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLL 265
NIV L +IV D+ + L+FEY+++ +L + D++ + +LL
Sbjct: 88 NIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTDYDI---RYYIYELL 136
Query: 266 DGLSYCHKRNFLHRDIKCSNILMNNR-GEVKLADFGLARLYNAEDRQRPYTNKVITLWYR 324
L YCH + +HRD+K N+++++ +++L D+GLA Y+ + Y +V + +++
Sbjct: 137 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP---GKEYNVRVASRYFK 193
Query: 325 PPELLLGEERYGPAIDVWSCGCIL-GELFVKKPLF 358
PELL+ + Y ++D+WS GC+ G +F K+P F
Sbjct: 194 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 228
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 62 LMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
L+ P A+D LDK+L D + R+TA +A+ + + V
Sbjct: 287 LVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 322
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 87/155 (56%), Gaps = 16/155 (10%)
Query: 206 NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLL 265
NIV L +IV D+ + L+FEY+++ +L + D++ + +LL
Sbjct: 89 NIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTDYD---IRYYIYELL 137
Query: 266 DGLSYCHKRNFLHRDIKCSNILMNNR-GEVKLADFGLARLYNAEDRQRPYTNKVITLWYR 324
L YCH + +HRD+K N+++++ +++L D+GLA Y+ + Y +V + +++
Sbjct: 138 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP---GKEYNVRVASRYFK 194
Query: 325 PPELLLGEERYGPAIDVWSCGCIL-GELFVKKPLF 358
PELL+ + Y ++D+WS GC+ G +F K+P F
Sbjct: 195 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 229
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 62 LMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
L+ P A+D LDK+L D + R+TA +A+ + + V
Sbjct: 288 LVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 323
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 87/155 (56%), Gaps = 16/155 (10%)
Query: 206 NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLL 265
NIV L +IV D+ + L+FEY+++ +L + D++ + +LL
Sbjct: 87 NIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTDYDI---RYYIYELL 135
Query: 266 DGLSYCHKRNFLHRDIKCSNILMNNR-GEVKLADFGLARLYNAEDRQRPYTNKVITLWYR 324
L YCH + +HRD+K N+++++ +++L D+GLA Y+ + Y +V + +++
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP---GKEYNVRVASRYFK 192
Query: 325 PPELLLGEERYGPAIDVWSCGCIL-GELFVKKPLF 358
PELL+ + Y ++D+WS GC+ G +F K+P F
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 227
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 62 LMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
L+ P A+D LDK+L D + R+TA +A+ + + V
Sbjct: 286 LVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 87/155 (56%), Gaps = 16/155 (10%)
Query: 206 NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLL 265
NIV L +IV D+ + L+FEY+++ +L + D++ + +LL
Sbjct: 87 NIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTDYDI---RYYIYELL 135
Query: 266 DGLSYCHKRNFLHRDIKCSNILMNNR-GEVKLADFGLARLYNAEDRQRPYTNKVITLWYR 324
L YCH + +HRD+K N+++++ +++L D+GLA Y+ + Y +V + +++
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP---GKEYNVRVASRYFK 192
Query: 325 PPELLLGEERYGPAIDVWSCGCIL-GELFVKKPLF 358
PELL+ + Y ++D+WS GC+ G +F K+P F
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 227
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 62 LMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
L+ P A+D LDK+L D + R+TA +A+ + + V
Sbjct: 286 LVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 87/155 (56%), Gaps = 16/155 (10%)
Query: 206 NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLL 265
NIV L +IV D+ + L+FEY+++ +L + D++ + +LL
Sbjct: 87 NIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTDYDI---RYYIYELL 135
Query: 266 DGLSYCHKRNFLHRDIKCSNILMNNR-GEVKLADFGLARLYNAEDRQRPYTNKVITLWYR 324
L YCH + +HRD+K N+++++ +++L D+GLA Y+ + Y +V + +++
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP---GKEYNVRVASRYFK 192
Query: 325 PPELLLGEERYGPAIDVWSCGCIL-GELFVKKPLF 358
PELL+ + Y ++D+WS GC+ G +F K+P F
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 227
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 62 LMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
L+ P A+D LDK+L D + R+TA +A+ + + V
Sbjct: 286 LVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 87/155 (56%), Gaps = 16/155 (10%)
Query: 206 NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLL 265
NIV L +IV D+ + L+FEY+++ +L + D++ + +LL
Sbjct: 87 NIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTDYD---IRYYIYELL 135
Query: 266 DGLSYCHKRNFLHRDIKCSNILMNNR-GEVKLADFGLARLYNAEDRQRPYTNKVITLWYR 324
L YCH + +HRD+K N+++++ +++L D+GLA Y+ + Y +V + +++
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP---GKEYNVRVASRYFK 192
Query: 325 PPELLLGEERYGPAIDVWSCGCIL-GELFVKKPLF 358
PELL+ + Y ++D+WS GC+ G +F K+P F
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 227
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 62 LMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
L+ P A+D LDK+L D + R+TA +A+ + + V
Sbjct: 286 LVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+KK L++ E REI+IL+ L H NIV + + + + +
Sbjct: 69 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC--------YSAGRRN 118
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
L+ EY+ + L L+ + + Q+ G+ Y + ++HRD+ NIL+
Sbjct: 119 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 178
Query: 289 NNRGEVKLADFGLARLY--NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
N VK+ DFGL ++ + E + + WY P L E ++ A DVWS G
Sbjct: 179 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGV 236
Query: 347 ILGELFV 353
+L ELF
Sbjct: 237 VLYELFT 243
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+KK L++ E REI+IL+ L H NIV + + + + +
Sbjct: 36 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC--------YSAGRRN 85
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
L+ EY+ + L L+ + + Q+ G+ Y + ++HRD+ NIL+
Sbjct: 86 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 145
Query: 289 NNRGEVKLADFGLARLY--NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
N VK+ DFGL ++ + E + + WY P L E ++ A DVWS G
Sbjct: 146 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGV 203
Query: 347 ILGELFV 353
+L ELF
Sbjct: 204 VLYELFT 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+KK L++ E REI+IL+ L H NIV + + + + +
Sbjct: 38 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC--------YSAGRRN 87
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
L+ EY+ + L L+ + + Q+ G+ Y + ++HRD+ NIL+
Sbjct: 88 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 147
Query: 289 NNRGEVKLADFGLARLY--NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
N VK+ DFGL ++ + E + + WY P L E ++ A DVWS G
Sbjct: 148 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGV 205
Query: 347 ILGELFV 353
+L ELF
Sbjct: 206 VLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+KK L++ E REI+IL+ L H NIV + + + + +
Sbjct: 37 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC--------YSAGRRN 86
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
L+ EY+ + L L+ + + Q+ G+ Y + ++HRD+ NIL+
Sbjct: 87 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 146
Query: 289 NNRGEVKLADFGLARLY--NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
N VK+ DFGL ++ + E + + WY P L E ++ A DVWS G
Sbjct: 147 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGV 204
Query: 347 ILGELFV 353
+L ELF
Sbjct: 205 VLYELFT 211
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 17/181 (9%)
Query: 178 KVRLENEKEGF--PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFE 235
KV ++ K G P + + E +I+++L H +V L +V+++ Y+V E
Sbjct: 35 KVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEEP-----------IYIVTE 83
Query: 236 YMDH-DLMGLLESGMVDFNEVNN-ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
YM+ L+ L+ G ++ N + Q+ G++Y + N++HRD++ +NIL+ N
Sbjct: 84 YMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLI 143
Query: 294 VKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
K+ADFGLARL + K W P L G R+ DVWS G +L EL
Sbjct: 144 CKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELVT 201
Query: 354 K 354
K
Sbjct: 202 K 202
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+KK L++ E REI+IL+ L H NIV + + + + +
Sbjct: 41 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC--------YSAGRRN 90
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
L+ EY+ + L L+ + + Q+ G+ Y + ++HRD+ NIL+
Sbjct: 91 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 150
Query: 289 NNRGEVKLADFGLARL--YNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
N VK+ DFGL ++ + E + + WY P L E ++ A DVWS G
Sbjct: 151 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGV 208
Query: 347 ILGELFV 353
+L ELF
Sbjct: 209 VLYELFT 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+KK L++ E REI+IL+ L H NIV + + + + +
Sbjct: 44 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC--------YSAGRRN 93
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
L+ EY+ + L L+ + + Q+ G+ Y + ++HRD+ NIL+
Sbjct: 94 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 153
Query: 289 NNRGEVKLADFGLARL--YNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
N VK+ DFGL ++ + E + + WY P L E ++ A DVWS G
Sbjct: 154 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGV 211
Query: 347 ILGELFV 353
+L ELF
Sbjct: 212 VLYELFT 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+KK L++ E REI+IL+ L H NIV + + + + +
Sbjct: 42 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC--------YSAGRRN 91
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
L+ EY+ + L L+ + + Q+ G+ Y + ++HRD+ NIL+
Sbjct: 92 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 151
Query: 289 NNRGEVKLADFGLARLY--NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
N VK+ DFGL ++ + E + + WY P L E ++ A DVWS G
Sbjct: 152 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGV 209
Query: 347 ILGELFV 353
+L ELF
Sbjct: 210 VLYELFT 216
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+KK L++ E REI+IL+ L H NIV + + + + +
Sbjct: 45 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC--------YSAGRRN 94
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
L+ EY+ + L L+ + + Q+ G+ Y + ++HRD+ NIL+
Sbjct: 95 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 154
Query: 289 NNRGEVKLADFGLARL--YNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
N VK+ DFGL ++ + E + + WY P L E ++ A DVWS G
Sbjct: 155 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGV 212
Query: 347 ILGELFV 353
+L ELF
Sbjct: 213 VLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+KK L++ E REI+IL+ L H NIV + + + + +
Sbjct: 43 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC--------YSAGRRN 92
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
L+ EY+ + L L+ + + Q+ G+ Y + ++HRD+ NIL+
Sbjct: 93 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 152
Query: 289 NNRGEVKLADFGLARL--YNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
N VK+ DFGL ++ + E + + WY P L E ++ A DVWS G
Sbjct: 153 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGV 210
Query: 347 ILGELFV 353
+L ELF
Sbjct: 211 VLYELFT 217
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+KK L++ E REI+IL+ L H NIV + + + + +
Sbjct: 56 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC--------YSAGRRN 105
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
L+ EY+ + L L+ + + Q+ G+ Y + ++HRD+ NIL+
Sbjct: 106 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 165
Query: 289 NNRGEVKLADFGLARLY--NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
N VK+ DFGL ++ + E + + WY P L E ++ A DVWS G
Sbjct: 166 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGV 223
Query: 347 ILGELFV 353
+L ELF
Sbjct: 224 VLYELFT 230
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+KK L++ E REI+IL+ L H NIV + + + + +
Sbjct: 38 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC--------YSAGRRN 87
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
L+ EY+ + L L+ + + Q+ G+ Y + ++HRD+ NIL+
Sbjct: 88 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 147
Query: 289 NNRGEVKLADFGLARLY--NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
N VK+ DFGL ++ + E + + WY P L E ++ A DVWS G
Sbjct: 148 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGV 205
Query: 347 ILGELFV 353
+L ELF
Sbjct: 206 VLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+KK L++ E REI+IL+ L H NIV + + + + +
Sbjct: 56 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC--------YSAGRRN 105
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
L+ EY+ + L L+ + + Q+ G+ Y + ++HRD+ NIL+
Sbjct: 106 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 165
Query: 289 NNRGEVKLADFGLARLY--NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
N VK+ DFGL ++ + E + + WY P L E ++ A DVWS G
Sbjct: 166 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGV 223
Query: 347 ILGELFV 353
+L ELF
Sbjct: 224 VLYELFT 230
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 18/208 (8%)
Query: 152 EPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLR 211
E + G ++ + T + VA++++ L+ + + I + EI ++R+ + NIVN
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI--INEILVMRENKNPNIVNY- 82
Query: 212 EIVTDKSDALDFRKDKGSFYLVFEYM-DHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
LD ++V EY+ L ++ +D ++ A++ R+ L L +
Sbjct: 83 ---------LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALEF 131
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRDIK NIL+ G VKL DFG E +R + V T ++ PE++
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVT 189
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
+ YGP +D+WS G + E+ +P +
Sbjct: 190 -RKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 18/208 (8%)
Query: 152 EPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLR 211
E + G ++ + T + VA++++ L+ + + I + EI ++R+ + NIVN
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI--INEILVMRENKNPNIVNY- 82
Query: 212 EIVTDKSDALDFRKDKGSFYLVFEYM-DHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
LD ++V EY+ L ++ +D ++ A++ R+ L L +
Sbjct: 83 ---------LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALEF 131
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRDIK NIL+ G VKL DFG E +R + V T ++ PE++
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SEMVGTPYWMAPEVVT 189
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
+ YGP +D+WS G + E+ +P +
Sbjct: 190 -RKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 18/208 (8%)
Query: 152 EPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLR 211
E + G ++ + T + VA++++ L+ + + I + EI ++R+ + NIVN
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI--INEILVMRENKNPNIVNY- 82
Query: 212 EIVTDKSDALDFRKDKGSFYLVFEYM-DHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
LD ++V EY+ L ++ +D ++ A++ R+ L L +
Sbjct: 83 ---------LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALEF 131
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRDIK NIL+ G VKL DFG E +R + V T ++ PE++
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVT 189
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
+ YGP +D+WS G + E+ +P +
Sbjct: 190 -RKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 18/208 (8%)
Query: 152 EPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLR 211
E + G ++ + T + VA++++ L+ + + I + EI ++R+ + NIVN
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI--INEILVMRENKNPNIVNY- 83
Query: 212 EIVTDKSDALDFRKDKGSFYLVFEYM-DHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
LD ++V EY+ L ++ +D ++ A++ R+ L L +
Sbjct: 84 ---------LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALEF 132
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HRDIK NIL+ G VKL DFG E +R + V T ++ PE++
Sbjct: 133 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVT 190
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
+ YGP +D+WS G + E+ +P +
Sbjct: 191 -RKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 189 PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES 247
P ++E +++++L H+ +V L +V+++ Y+V EYM L+ L+
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----------IYIVIEYMSKGSLLDFLKG 105
Query: 248 GMVDFNEVNN-ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYN 306
M + + + Q+ G++Y + N++HRD++ +NIL+ K+ADFGLARL
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 307 AEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
+ K W P L G R+ DVWS G +L EL K
Sbjct: 166 DNEXTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 211
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 189 PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES 247
P ++E +++++L H+ +V L +V+++ Y+V EYM L+ L+
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----------IYIVIEYMSKGSLLDFLKG 105
Query: 248 GMVDFNEVNN-ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYN 306
M + + + Q+ G++Y + N++HRD++ +NIL+ K+ADFGLARL
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 307 AEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
+ K W P L G R+ DVWS G +L EL K
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 211
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 17/161 (10%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLM--GLLESGMVD 251
REI+ L+ H +I+ L ++++ SD ++V EY+ + + ++G +D
Sbjct: 65 REIQNLKLFRHPHIIKLYQVISTPSD----------IFMVMEYVSGGELFDYICKNGRLD 114
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
E + + +Q+L G+ YCH+ +HRD+K N+L++ K+ADFGL+ + + +
Sbjct: 115 --EKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 172
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
R + Y PE++ G GP +D+WS G IL L
Sbjct: 173 RXSCG---SPNYAAPEVISGRLYAGPEVDIWSSGVILYALL 210
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 65 PGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
P + LL ML++DP +R T + + W K P+ + P
Sbjct: 241 PSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFP 280
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+KK L++ E REI+IL+ L H NIV + + + + +
Sbjct: 38 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC--------YSAGRRN 87
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
L+ EY+ + L L+ + + Q+ G+ Y + ++HRD+ NIL+
Sbjct: 88 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 147
Query: 289 NNRGEVKLADFGLARLY--NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
N VK+ DFGL ++ + E + + WY P L E ++ A DVWS G
Sbjct: 148 ENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGV 205
Query: 347 ILGELFV 353
+L ELF
Sbjct: 206 VLYELFT 212
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 6/128 (4%)
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
+++ EY+ + LLE G +D E A+I+R++L GL Y H +HRDIK +N+L+
Sbjct: 80 LWIIMEYLGGGSALDLLEPGPLD--ETQIATILREILKGLDYLHSEKKIHRDIKAANVLL 137
Query: 289 NNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
+ GEVKLADFG+A D Q V T ++ PE ++ + Y D+WS G
Sbjct: 138 SEHGEVKLADFGVAG--QLTDTQIKRNTFVGTPFWMAPE-VIKQSAYDSKADIWSLGITA 194
Query: 349 GELFVKKP 356
EL +P
Sbjct: 195 IELARGEP 202
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 6/128 (4%)
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
+++ EY+ + LLE G +D E A+I+R++L GL Y H +HRDIK +N+L+
Sbjct: 100 LWIIMEYLGGGSALDLLEPGPLD--ETQIATILREILKGLDYLHSEKKIHRDIKAANVLL 157
Query: 289 NNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
+ GEVKLADFG+A D Q V T ++ PE ++ + Y D+WS G
Sbjct: 158 SEHGEVKLADFGVAG--QLTDTQIKRNTFVGTPFWMAPE-VIKQSAYDSKADIWSLGITA 214
Query: 349 GELFVKKP 356
EL +P
Sbjct: 215 IELARGEP 222
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 189 PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD-LMGLLES 247
P ++E +++++L H+ +V L +V+++ Y+V EYM L+ L+
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----------IYIVMEYMSKGCLLDFLKG 105
Query: 248 GMVDFNEVNN-ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYN 306
M + + + Q+ G++Y + N++HRD++ +NIL+ K+ADFGLARL
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 307 AEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
+ K W P L G R+ DVWS G +L EL K
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 211
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 189 PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES 247
P ++E +++++L H+ +V L +V+++ Y+V EYM L+ L+
Sbjct: 46 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----------IYIVTEYMSKGSLLDFLKG 94
Query: 248 GMVDFNEVNN-ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYN 306
M + + + Q+ G++Y + N++HRD++ +NIL+ K+ADFGLARL
Sbjct: 95 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 154
Query: 307 AEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
+ K W P L G R+ DVWS G +L EL K
Sbjct: 155 DNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 200
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 189 PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES 247
P ++E +++++L H+ +V L +V+++ Y+V EYM L+ L+
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----------IYIVTEYMSKGSLLDFLKG 105
Query: 248 GMVDFNEVNN-ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYN 306
M + + + Q+ G++Y + N++HRD++ +NIL+ K+ADFGLARL
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 307 AEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
+ K W P L G R+ DVWS G +L EL K
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 211
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 6/128 (4%)
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
+++ EY+ + LLE G +D E A+I+R++L GL Y H +HRDIK +N+L+
Sbjct: 95 LWIIMEYLGGGSALDLLEPGPLD--ETQIATILREILKGLDYLHSEKKIHRDIKAANVLL 152
Query: 289 NNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
+ GEVKLADFG+A D Q V T ++ PE ++ + Y D+WS G
Sbjct: 153 SEHGEVKLADFGVAG--QLTDTQIKRNXFVGTPFWMAPE-VIKQSAYDSKADIWSLGITA 209
Query: 349 GELFVKKP 356
EL +P
Sbjct: 210 IELARGEP 217
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 91/188 (48%), Gaps = 16/188 (8%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VALK VR NEK F A EI+IL L ++ N ++ + FR +
Sbjct: 125 VALKMVR--NEKR-FHRQAAEEIRILEHLRKQDKDNTMNVI-HMLENFTFRN---HICMT 177
Query: 234 FEYMDHDLMGLLESGMVD-FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRG 292
FE + +L L++ F+ +L L HK +H D+K NIL+ +G
Sbjct: 178 FELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQG 237
Query: 293 E--VKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGE 350
+K+ DFG + + QR YT + + +YR PE++LG RYG ID+WS GCIL E
Sbjct: 238 RSGIKVIDFGSS----CYEHQRVYT-XIQSRFYRAPEVILGA-RYGMPIDMWSLGCILAE 291
Query: 351 LFVKKPLF 358
L PL
Sbjct: 292 LLTGYPLL 299
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 65 PGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
P LD L + LE DP R+T QAL+ WL+ P+ PP
Sbjct: 383 PLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPK--PP 420
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 90/191 (47%), Gaps = 21/191 (10%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
+A+K++ + + P+ EI + + L HKNIV L + G +
Sbjct: 50 IAIKEIPERDSRYSQPLH--EEIALHKHLKHKNIVQY----------LGSFSENGFIKIF 97
Query: 234 FEYM-DHDLMGLLES--GMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
E + L LL S G + NE +Q+L+GL Y H +HRDIK N+L+N
Sbjct: 98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT 157
Query: 291 -RGEVKLADFGLA-RLYNAEDRQRPYTNKVITLWYRPPELL-LGEERYGPAIDVWSCGCI 347
G +K++DFG + RL +T TL Y PE++ G YG A D+WS GC
Sbjct: 158 YSGVLKISDFGTSKRLAGINPCTETFTG---TLQYMAPEIIDKGPRGYGKAADIWSLGCT 214
Query: 348 LGELFVKKPLF 358
+ E+ KP F
Sbjct: 215 IIEMATGKPPF 225
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+KK L++ E REI+IL+ L H NIV + + + + +
Sbjct: 41 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC--------YSAGRRN 90
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
L+ E++ + L L+ + + Q+ G+ Y + ++HRD+ NIL+
Sbjct: 91 LKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 150
Query: 289 NNRGEVKLADFGLARLY--NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
N VK+ DFGL ++ + E + + WY P L E ++ A DVWS G
Sbjct: 151 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGV 208
Query: 347 ILGELFV 353
+L ELF
Sbjct: 209 VLYELFT 215
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 189 PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES 247
P ++E +++++L H+ +V L +V+++ Y+V EYM L+ L+
Sbjct: 48 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----------IYIVTEYMSKGSLLDFLKG 96
Query: 248 GMVDFNEVNN-ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYN 306
M + + + Q+ G++Y + N++HRD++ +NIL+ K+ADFGLARL
Sbjct: 97 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 156
Query: 307 AEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
+ K W P L G R+ DVWS G +L EL K
Sbjct: 157 DNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 202
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 6/128 (4%)
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
+++ EY+ + LLE G +D E A+I+R++L GL Y H +HRDIK +N+L+
Sbjct: 80 LWIIMEYLGGGSALDLLEPGPLD--ETQIATILREILKGLDYLHSEKKIHRDIKAANVLL 137
Query: 289 NNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
+ GEVKLADFG+A D Q V T ++ PE ++ + Y D+WS G
Sbjct: 138 SEHGEVKLADFGVAG--QLTDTQIKRNXFVGTPFWMAPE-VIKQSAYDSKADIWSLGITA 194
Query: 349 GELFVKKP 356
EL +P
Sbjct: 195 IELARGEP 202
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 189 PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES 247
P ++E +++++L H+ +V L +V+++ Y+V EYM L+ L+
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----------IYIVCEYMSKGSLLDFLKG 105
Query: 248 GMVDFNEVNN-ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYN 306
M + + + Q+ G++Y + N++HRD++ +NIL+ K+ADFGLARL
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 307 AEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
+ K W P L G R+ DVWS G +L EL K
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 211
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 91/188 (48%), Gaps = 16/188 (8%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VALK VR NEK F A EI+IL L ++ N ++ + FR +
Sbjct: 125 VALKMVR--NEKR-FHRQAAEEIRILEHLRKQDKDNTMNVI-HMLENFTFRN---HICMT 177
Query: 234 FEYMDHDLMGLLESGMVD-FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRG 292
FE + +L L++ F+ +L L HK +H D+K NIL+ +G
Sbjct: 178 FELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQG 237
Query: 293 E--VKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGE 350
+K+ DFG + + QR YT + + +YR PE++LG RYG ID+WS GCIL E
Sbjct: 238 RSGIKVIDFGSS----CYEHQRVYT-XIQSRFYRAPEVILGA-RYGMPIDMWSLGCILAE 291
Query: 351 LFVKKPLF 358
L PL
Sbjct: 292 LLTGYPLL 299
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 65 PGALDLLDKMLELDPERRITAEQALKSVWLKNVHP 99
P LD L + LE DP R+T QAL+ WL+ P
Sbjct: 383 PLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLP 417
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 86/158 (54%), Gaps = 22/158 (13%)
Query: 206 NIVNLREIVTD---KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMR 262
NI+ L +IV D ++ AL VFE++++ L + D++ M
Sbjct: 93 NIITLADIVKDPVSRTPAL-----------VFEHVNNTDFKQLYQTLTDYD---IRFYMY 138
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRG-EVKLADFGLARLYNAEDRQRPYTNKVITL 321
++L L YCH +HRD+K N+L+++ +++L D+GLA Y+ + Y +V +
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHP---GQEYNVRVASR 195
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGEL-FVKKPLF 358
+++ PELL+ + Y ++D+WS GC+L + F K+P F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 52 HRRRLREEF------SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
H R+ E F L+ P ALD LDK+L D + R+TA +A++ + V
Sbjct: 276 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 78/167 (46%), Gaps = 15/167 (8%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGM-VD 251
RE+ +L + H NIV RE ++ GS Y+V +Y + DL + + V
Sbjct: 72 REVAVLANMKHPNIVQYRESF----------EENGSLYIVMDYCEGGDLFKRINAQKGVL 121
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F E Q+ L + H R LHRDIK NI + G V+L DFG+AR+ N+
Sbjct: 122 FQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL 181
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ T +Y PE+ + Y D+W+ GC+L EL K F
Sbjct: 182 ARAC--IGTPYYLSPEICENKP-YNNKSDIWALGCVLYELCTLKHAF 225
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 18/208 (8%)
Query: 152 EPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLR 211
E + G ++ + T + VA++++ L+ + + I + EI ++R+ + NIVN
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI--INEILVMRENKNPNIVNY- 83
Query: 212 EIVTDKSDALDFRKDKGSFYLVFEYM-DHDLMGLLESGMVDFNEVNNASIMRQLLDGLSY 270
LD ++V EY+ L ++ +D ++ A++ R+ L L +
Sbjct: 84 ---------LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALEF 132
Query: 271 CHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL 330
H +HR+IK NIL+ G VKL DFG E +R + V T ++ PE++
Sbjct: 133 LHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVT 190
Query: 331 GEERYGPAIDVWSCGCILGELFVKKPLF 358
+ YGP +D+WS G + E+ +P +
Sbjct: 191 -RKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 189 PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD-LMGLLES 247
P ++E +++++L H+ +V L +V+++ Y+V EYM L+ L+
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----------IYIVTEYMSKGCLLDFLKG 105
Query: 248 GMVDFNEVNN-ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYN 306
M + + + Q+ G++Y + N++HRD++ +NIL+ K+ADFGLARL
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 307 AEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
+ K W P L G R+ DVWS G +L EL K
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 211
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 22/158 (13%)
Query: 206 NIVNLREIVTD---KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMR 262
NI+ L +IV D ++ AL VFE++++ L + D++ M
Sbjct: 93 NIITLADIVKDPVSRTPAL-----------VFEHVNNTDFKQLRQTLTDYD---IRFYMY 138
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRG-EVKLADFGLARLYNAEDRQRPYTNKVITL 321
++L L YCH +HRD+K N+++++ +++L D+GLA Y+ + Y +V +
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---GQEYNVRVASR 195
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGEL-FVKKPLF 358
+++ PELL+ + Y ++D+WS GC+L + F K+P F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 52 HRRRLREEF------SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
H R+ E F L+ P ALD LDK+L D + R+TA +A++ + V
Sbjct: 276 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 84/155 (54%), Gaps = 16/155 (10%)
Query: 206 NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLL 265
NI+ L +IV D + LVFE++++ L + D++ M ++L
Sbjct: 93 NIITLADIVKDPV--------SRTPALVFEHVNNTDFKQLYQTLTDYD---IRFYMYEIL 141
Query: 266 DGLSYCHKRNFLHRDIKCSNILMNNRG-EVKLADFGLARLYNAEDRQRPYTNKVITLWYR 324
L YCH +HRD+K N+++++ +++L D+GLA Y+ + Y +V + +++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---GQEYNVRVASRYFK 198
Query: 325 PPELLLGEERYGPAIDVWSCGCILGEL-FVKKPLF 358
PELL+ + Y ++D+WS GC+L + F K+P F
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 52 HRRRLREEF------SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
H R+ E F L+ P ALD LDK+L D + R+TA +A++ + V E P
Sbjct: 276 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYPVVKEQSQP 334
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 189 PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES 247
P ++E ++++++ H+ +V L +V+++ Y+V EYM L+ L+
Sbjct: 57 PEAFLQEAQVMKKIRHEKLVQLYAVVSEEP-----------IYIVTEYMSKGSLLDFLKG 105
Query: 248 GMVDFNEVNN-ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYN 306
M + + + Q+ G++Y + N++HRD++ +NIL+ K+ADFGLARL
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 307 AEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
+ K W P L G R+ DVWS G +L EL K
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 211
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 90/191 (47%), Gaps = 21/191 (10%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
+A+K++ + + P+ EI + + L HKNIV L + G +
Sbjct: 36 IAIKEIPERDSRYSQPLH--EEIALHKHLKHKNIVQY----------LGSFSENGFIKIF 83
Query: 234 FEYM-DHDLMGLLES--GMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
E + L LL S G + NE +Q+L+GL Y H +HRDIK N+L+N
Sbjct: 84 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT 143
Query: 291 -RGEVKLADFGLA-RLYNAEDRQRPYTNKVITLWYRPPELL-LGEERYGPAIDVWSCGCI 347
G +K++DFG + RL +T TL Y PE++ G YG A D+WS GC
Sbjct: 144 YSGVLKISDFGTSKRLAGINPCTETFTG---TLQYMAPEIIDKGPRGYGKAADIWSLGCT 200
Query: 348 LGELFVKKPLF 358
+ E+ KP F
Sbjct: 201 IIEMATGKPPF 211
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 29/175 (16%)
Query: 189 PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESG 248
P ++E +++++L H+ +V L +V+++ Y+V EYM+ +
Sbjct: 54 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----------IYIVTEYMN-------KGS 95
Query: 249 MVDFNEVNNASIMR---------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADF 299
++DF + +R Q+ G++Y + N++HRD++ +NIL+ K+ADF
Sbjct: 96 LLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 155
Query: 300 GLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
GLARL + K W P L G R+ DVWS G +L EL K
Sbjct: 156 GLARLIEDNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 208
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 189 PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES 247
P ++E +++++L H+ +V L +V+++ Y+V EYM L+ L+
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----------IYIVTEYMSKGSLLDFLKG 105
Query: 248 GMVDFNEVNN-ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYN 306
M + + + Q+ G++Y + N++HRD+ +NIL+ K+ADFGLARL
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIE 165
Query: 307 AEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
+ K W P L G R+ DVWS G +L EL K
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 211
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 29/175 (16%)
Query: 189 PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESG 248
P ++E +++++L H+ +V L +V+++ Y+V EYM +
Sbjct: 306 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----------IYIVTEYMS-------KGS 347
Query: 249 MVDFNEVNNASIMR---------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADF 299
++DF + +R Q+ G++Y + N++HRD++ +NIL+ K+ADF
Sbjct: 348 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 407
Query: 300 GLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
GLARL + K W P L G R+ DVWS G +L EL K
Sbjct: 408 GLARLIEDNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 460
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 22/158 (13%)
Query: 206 NIVNLREIVTD---KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMR 262
NI+ L +IV D ++ AL VFE++++ L + D++ M
Sbjct: 93 NIITLADIVKDPVSRTPAL-----------VFEHVNNTDFKQLYQTLTDYD---IRFYMY 138
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRG-EVKLADFGLARLYNAEDRQRPYTNKVITL 321
++L L YCH +HRD+K N+++++ +++L D+GLA Y+ + Y +V +
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---GQEYNVRVASR 195
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGEL-FVKKPLF 358
+++ PELL+ + Y ++D+WS GC+L + F K+P F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 52 HRRRLREEF------SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
H R+ E F L+ P ALD LDK+L D + R+TA +A++ + V
Sbjct: 276 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 22/158 (13%)
Query: 206 NIVNLREIVTD---KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMR 262
NI+ L +IV D ++ AL VFE++++ L + D++ M
Sbjct: 93 NIITLADIVKDPVSRTPAL-----------VFEHVNNTDFKQLYQTLTDYD---IRFYMY 138
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRG-EVKLADFGLARLYNAEDRQRPYTNKVITL 321
++L L YCH +HRD+K N+++++ +++L D+GLA Y+ + Y +V +
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---GQEYNVRVASR 195
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGEL-FVKKPLF 358
+++ PELL+ + Y ++D+WS GC+L + F K+P F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 52 HRRRLREEF------SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
H R+ E F L+ P ALD LDK+L D + R+TA +A++ + V
Sbjct: 276 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 22/158 (13%)
Query: 206 NIVNLREIVTD---KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMR 262
NI+ L +IV D ++ AL VFE++++ L + D++ M
Sbjct: 92 NIITLADIVKDPVSRTPAL-----------VFEHVNNTDFKQLYQTLTDYD---IRFYMY 137
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRG-EVKLADFGLARLYNAEDRQRPYTNKVITL 321
++L L YCH +HRD+K N+++++ +++L D+GLA Y+ + Y +V +
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---GQEYNVRVASR 194
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGEL-FVKKPLF 358
+++ PELL+ + Y ++D+WS GC+L + F K+P F
Sbjct: 195 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 232
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 52 HRRRLREEF------SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
H R+ E F L+ P ALD LDK+L D + R+TA +A++ + V
Sbjct: 275 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 326
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 22/158 (13%)
Query: 206 NIVNLREIVTD---KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMR 262
NI+ L +IV D ++ AL VFE++++ L + D++ M
Sbjct: 93 NIITLADIVKDPVSRTPAL-----------VFEHVNNTDFKQLYQTLTDYD---IRFYMY 138
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRG-EVKLADFGLARLYNAEDRQRPYTNKVITL 321
++L L YCH +HRD+K N+++++ +++L D+GLA Y+ + Y +V +
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---GQEYNVRVASR 195
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGEL-FVKKPLF 358
+++ PELL+ + Y ++D+WS GC+L + F K+P F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 52 HRRRLREEF------SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
H R+ E F L+ P ALD LDK+L D + R+TA +A++ + V
Sbjct: 276 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 22/158 (13%)
Query: 206 NIVNLREIVTD---KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMR 262
NI+ L +IV D ++ AL VFE++++ L + D++ M
Sbjct: 93 NIITLADIVKDPVSRTPAL-----------VFEHVNNTDFKQLYQTLTDYD---IRFYMY 138
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRG-EVKLADFGLARLYNAEDRQRPYTNKVITL 321
++L L YCH +HRD+K N+++++ +++L D+GLA Y+ + Y +V +
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---GQEYNVRVASR 195
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGEL-FVKKPLF 358
+++ PELL+ + Y ++D+WS GC+L + F K+P F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 52 HRRRLREEF------SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
H R+ E F L+ P ALD LDK+L D + R+TA +A++ + V
Sbjct: 276 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 22/158 (13%)
Query: 206 NIVNLREIVTD---KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMR 262
NI+ L +IV D ++ AL VFE++++ L + D++ M
Sbjct: 93 NIITLADIVKDPVSRTPAL-----------VFEHVNNTDFKQLYQTLTDYD---IRFYMY 138
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRG-EVKLADFGLARLYNAEDRQRPYTNKVITL 321
++L L YCH +HRD+K N+++++ +++L D+GLA Y+ + Y +V +
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---GQEYNVRVASR 195
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGEL-FVKKPLF 358
+++ PELL+ + Y ++D+WS GC+L + F K+P F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 52 HRRRLREEF------SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
H R+ E F L+ P ALD LDK+L D + R+TA +A++ + V
Sbjct: 276 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 22/158 (13%)
Query: 206 NIVNLREIVTD---KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMR 262
NI+ L +IV D ++ AL VFE++++ L + D++ M
Sbjct: 93 NIITLADIVKDPVSRTPAL-----------VFEHVNNTDFKQLYQTLTDYD---IRFYMY 138
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRG-EVKLADFGLARLYNAEDRQRPYTNKVITL 321
++L L YCH +HRD+K N+++++ +++L D+GLA Y+ + Y +V +
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---GQEYNVRVASR 195
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGEL-FVKKPLF 358
+++ PELL+ + Y ++D+WS GC+L + F K+P F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 52 HRRRLREEF------SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
H R+ E F L+ P ALD LDK+L D + R+TA +A++ + V
Sbjct: 276 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 16/160 (10%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLES-GMVDF 252
+EI++LR+L HKN++ L +++ + ++K Y+V EY + +L+S F
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVL--------YNEEKQKMYMVMEYCVCGMQEMLDSVPEKRF 106
Query: 253 NEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARL---YNAED 309
QL+DGL Y H + +H+DIK N+L+ G +K++ G+A + A+D
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADD 166
Query: 310 RQRPYTNKVITLWYRPPELLLGEERY-GPAIDVWSCGCIL 348
R + ++PPE+ G + + G +D+WS G L
Sbjct: 167 TCRTSQG---SPAFQPPEIANGLDTFSGFKVDIWSAGVTL 203
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 69 DLLDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQLPTWQDCHELW 117
DLL MLE +P +R + Q + W + HP + P +P D + W
Sbjct: 242 DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPSPDTKDRW 290
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+KK L++ E REI+IL+ L H NIV + + + + +
Sbjct: 39 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC--------YSAGRRN 88
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
L+ EY+ + L L+ + + Q+ G+ Y + ++HR++ NIL+
Sbjct: 89 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILV 148
Query: 289 NNRGEVKLADFGLARLY--NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
N VK+ DFGL ++ + E + + WY P L E ++ A DVWS G
Sbjct: 149 ENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGV 206
Query: 347 ILGELFV 353
+L ELF
Sbjct: 207 VLYELFT 213
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 22/158 (13%)
Query: 206 NIVNLREIVTD---KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMR 262
NI+ L +IV D ++ AL VFE++++ L + D++ M
Sbjct: 93 NIITLADIVKDPVSRTPAL-----------VFEHVNNTDFKQLYQTLTDYD---IRFYMY 138
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRG-EVKLADFGLARLYNAEDRQRPYTNKVITL 321
++L L YCH +HRD+K N+++++ +++L D+GLA Y+ + Y +V +
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---GQEYNVRVASR 195
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGEL-FVKKPLF 358
+++ PELL+ + Y ++D+WS GC+L + F K+P F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 52 HRRRLREEF------SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
H R+ E F L+ P ALD LDK+L D + R+TA +A++ + V
Sbjct: 276 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 22/158 (13%)
Query: 206 NIVNLREIVTD---KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMR 262
NI+ L +IV D ++ AL VFE++++ L + D++ M
Sbjct: 91 NIITLADIVKDPVSRTPAL-----------VFEHVNNTDFKQLYQTLTDYD---IRFYMY 136
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRG-EVKLADFGLARLYNAEDRQRPYTNKVITL 321
++L L YCH +HRD+K N+++++ +++L D+GLA Y+ + Y +V +
Sbjct: 137 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---GQEYNVRVASR 193
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGEL-FVKKPLF 358
+++ PELL+ + Y ++D+WS GC+L + F K+P F
Sbjct: 194 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 231
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 52 HRRRLREEF------SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
H R+ E F L+ P ALD LDK+L D + R+TA +A++ + V
Sbjct: 274 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 325
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 22/158 (13%)
Query: 206 NIVNLREIVTD---KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMR 262
NI+ L +IV D ++ AL VFE++++ L + D++ M
Sbjct: 98 NIITLADIVKDPVSRTPAL-----------VFEHVNNTDFKQLYQTLTDYD---IRFYMY 143
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRG-EVKLADFGLARLYNAEDRQRPYTNKVITL 321
++L L YCH +HRD+K N+++++ +++L D+GLA Y+ + Y +V +
Sbjct: 144 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---GQEYNVRVASR 200
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGEL-FVKKPLF 358
+++ PELL+ + Y ++D+WS GC+L + F K+P F
Sbjct: 201 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 238
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 52 HRRRLREEF------SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
H R+ E F L+ P ALD LDK+L D + R+TA +A++ + V
Sbjct: 281 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 332
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 22/158 (13%)
Query: 206 NIVNLREIVTD---KSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMR 262
NI+ L +IV D ++ AL VFE++++ L + D++ M
Sbjct: 92 NIITLADIVKDPVSRTPAL-----------VFEHVNNTDFKQLYQTLTDYD---IRFYMY 137
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRG-EVKLADFGLARLYNAEDRQRPYTNKVITL 321
++L L YCH +HRD+K N+++++ +++L D+GLA Y+ + Y +V +
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---GQEYNVRVASR 194
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGEL-FVKKPLF 358
+++ PELL+ + Y ++D+WS GC+L + F K+P F
Sbjct: 195 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 232
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 52 HRRRLREEF------SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
H R+ E F L+ P ALD LDK+L D + R+TA +A++ + V
Sbjct: 275 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 326
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 29/175 (16%)
Query: 189 PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESG 248
P ++E +++++L H+ +V L +V+++ Y+V EYM +
Sbjct: 50 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----------IYIVTEYMS-------KGS 91
Query: 249 MVDFNEVNNASIMR---------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADF 299
++DF + +R Q+ G++Y + N++HRD++ +NIL+ K+ADF
Sbjct: 92 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 151
Query: 300 GLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
GLARL + K W P L G R+ DVWS G +L EL K
Sbjct: 152 GLARLIEDNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 204
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 29/175 (16%)
Query: 189 PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESG 248
P ++E +++++L H+ +V L +V+++ Y+V EYM+ +
Sbjct: 54 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----------IYIVTEYMN-------KGS 95
Query: 249 MVDFNEVNNASIMR---------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADF 299
++DF + +R Q+ G++Y + N++HRD++ +NIL+ K+ADF
Sbjct: 96 LLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 155
Query: 300 GLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
GLARL + K W P L G R+ DVWS G +L EL K
Sbjct: 156 GLARLIEDNEWTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 208
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 14/163 (8%)
Query: 189 PITAV-REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLES 247
PI V +EI IL++L+H N+V L E++ D ++ Y+VFE ++ + + +
Sbjct: 79 PIEQVYQEIAILKKLDHPNVVKLVEVLDDPNE--------DHLYMVFELVNQGPVMEVPT 130
Query: 248 GMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNA 307
+ +E + L+ G+ Y H + +HRDIK SN+L+ G +K+ADFG++ +
Sbjct: 131 -LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 308 EDRQRPYTNKVITLWYRPPELLLGEERY--GPAIDVWSCGCIL 348
D +N V T + PE L + G A+DVW+ G L
Sbjct: 190 SDAL--LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 29/175 (16%)
Query: 189 PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESG 248
P ++E +++++L H+ +V L +V+++ Y+V EYM +
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----------IYIVTEYMS-------KGS 264
Query: 249 MVDFNEVNNASIMR---------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADF 299
++DF + +R Q+ G++Y + N++HRD++ +NIL+ K+ADF
Sbjct: 265 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 324
Query: 300 GLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
GLARL + K W P L G R+ DVWS G +L EL K
Sbjct: 325 GLARLIEDNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 377
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 29/175 (16%)
Query: 189 PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESG 248
P ++E +++++L H+ +V L +V+++ Y+V EYM +
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----------IYIVTEYMS-------KGS 264
Query: 249 MVDFNEVNNASIMR---------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADF 299
++DF + +R Q+ G++Y + N++HRD++ +NIL+ K+ADF
Sbjct: 265 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 324
Query: 300 GLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
GLARL + K W P L G R+ DVWS G +L EL K
Sbjct: 325 GLARLIEDNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 377
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+K ++ N P ++E +++++L H+ +V L +V+++ Y+V
Sbjct: 212 VAIKTLKPGNMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----------IYIV 257
Query: 234 FEYMDH-DLMGLLESGMVDFNEVNN-ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR 291
EYM L+ L+ M + + + Q+ G++Y + N++HRD++ +NIL+
Sbjct: 258 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 317
Query: 292 GEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K+ADFGL RL + K W P L G R+ DVWS G +L EL
Sbjct: 318 LVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTEL 375
Query: 352 FVK 354
K
Sbjct: 376 TTK 378
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 29/175 (16%)
Query: 189 PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESG 248
P ++E +++++L H+ +V L +V+++ Y+V EYM +
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----------IYIVGEYMS-------KGS 264
Query: 249 MVDFNEVNNASIMR---------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADF 299
++DF + +R Q+ G++Y + N++HRD++ +NIL+ K+ADF
Sbjct: 265 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 324
Query: 300 GLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
GLARL + K W P L G R+ DVWS G +L EL K
Sbjct: 325 GLARLIEDNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 377
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 90/188 (47%), Gaps = 16/188 (8%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VALK VR NEK F A EI+IL L ++ N ++ + FR +
Sbjct: 125 VALKMVR--NEKR-FHRQAAEEIRILEHLRKQDKDNTMNVI-HMLENFTFRN---HICMT 177
Query: 234 FEYMDHDLMGLLESGMVD-FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRG 292
FE + +L L++ F+ +L L HK +H D+K NIL+ +G
Sbjct: 178 FELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQG 237
Query: 293 E--VKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGE 350
+K+ DFG + + QR Y + + +YR PE++LG RYG ID+WS GCIL E
Sbjct: 238 RSGIKVIDFGSS----CYEHQRVYX-XIQSRFYRAPEVILGA-RYGMPIDMWSLGCILAE 291
Query: 351 LFVKKPLF 358
L PL
Sbjct: 292 LLTGYPLL 299
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 65 PGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPP 104
P LD L + LE DP R+T QAL+ WL+ P+ PP
Sbjct: 383 PLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPK--PP 420
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 7/132 (5%)
Query: 227 KGS-FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KGS +++ EY+ + LL +G F+E A++++++L GL Y H +HRDIK +
Sbjct: 92 KGSKLWIIMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAA 149
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
N+L++ +G+VKLADFG+A D Q V T ++ PE ++ + Y D+WS
Sbjct: 150 NVLLSEQGDVKLADFGVAG--QLTDTQIKRNTFVGTPFWMAPE-VIQQSAYDSKADIWSL 206
Query: 345 GCILGELFVKKP 356
G EL +P
Sbjct: 207 GITAIELAKGEP 218
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 31/185 (16%)
Query: 178 KVRLENEKEGF--PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFE 235
KV +++ K+G P + E +++QL H+ +V L +VT + Y++ E
Sbjct: 47 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----------IYIITE 95
Query: 236 YMDHDLMGLLESGMVDFNEVNNA---------SIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
YM++ +VDF + + + Q+ +G+++ +RN++HRD++ +NI
Sbjct: 96 YMEN-------GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 148
Query: 287 LMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
L+++ K+ADFGLARL + K W P + G + DVWS G
Sbjct: 149 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG--TFTIKSDVWSFGI 206
Query: 347 ILGEL 351
+L E+
Sbjct: 207 LLTEI 211
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 18/206 (8%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ + +G + ++ELVA+K + E REI R L H NIV
Sbjct: 23 LVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIAANVKREIINHRSLRHPNIVR 79
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLS 269
+E++ + +V EY + F+E +QL+ G+S
Sbjct: 80 FKEVILTPT----------HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 270 YCHKRNFLHRDIKCSNILMNNR--GEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPE 327
YCH HRD+K N L++ +K+ DFG ++ + + + V T Y PE
Sbjct: 130 YCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPE 186
Query: 328 LLLGEERYGPAIDVWSCGCILGELFV 353
+LL +E G DVWSCG L + V
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLV 212
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 31/185 (16%)
Query: 178 KVRLENEKEGF--PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFE 235
KV +++ K+G P + E +++QL H+ +V L +VT + Y++ E
Sbjct: 39 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----------IYIITE 87
Query: 236 YMDHDLMGLLESGMVDFNEVNNA---------SIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
YM++ +VDF + + + Q+ +G+++ +RN++HRD++ +NI
Sbjct: 88 YMEN-------GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 140
Query: 287 LMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
L+++ K+ADFGLARL + K W P + G + DVWS G
Sbjct: 141 LVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYG--TFTIKSDVWSFGI 198
Query: 347 ILGEL 351
+L E+
Sbjct: 199 LLTEI 203
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 31/185 (16%)
Query: 178 KVRLENEKEGF--PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFE 235
KV +++ K+G P + E +++QL H+ +V L +VT + Y++ E
Sbjct: 48 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----------IYIITE 96
Query: 236 YMDHDLMGLLESGMVDFNEVNNA---------SIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
YM++ +VDF + + + Q+ +G+++ +RN++HRD++ +NI
Sbjct: 97 YMEN-------GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 149
Query: 287 LMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
L+++ K+ADFGLARL + K W P + G + DVWS G
Sbjct: 150 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG--TFTIKSDVWSFGI 207
Query: 347 ILGEL 351
+L E+
Sbjct: 208 LLTEI 212
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 31/185 (16%)
Query: 178 KVRLENEKEGF--PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFE 235
KV +++ K+G P + E +++QL H+ +V L +VT + Y++ E
Sbjct: 45 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----------IYIITE 93
Query: 236 YMDHDLMGLLESGMVDFNEVNNA---------SIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
YM++ +VDF + + + Q+ +G+++ +RN++HRD++ +NI
Sbjct: 94 YMEN-------GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 146
Query: 287 LMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
L+++ K+ADFGLARL + K W P + G + DVWS G
Sbjct: 147 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG--TFTIKSDVWSFGI 204
Query: 347 ILGEL 351
+L E+
Sbjct: 205 LLTEI 209
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 31/185 (16%)
Query: 178 KVRLENEKEGF--PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFE 235
KV +++ K+G P + E +++QL H+ +V L +VT + Y++ E
Sbjct: 49 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----------IYIITE 97
Query: 236 YMDHDLMGLLESGMVDFNEVNNA---------SIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
YM++ +VDF + + + Q+ +G+++ +RN++HRD++ +NI
Sbjct: 98 YMEN-------GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 150
Query: 287 LMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
L+++ K+ADFGLARL + K W P + G + DVWS G
Sbjct: 151 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG--TFTIKSDVWSFGI 208
Query: 347 ILGEL 351
+L E+
Sbjct: 209 LLTEI 213
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 31/185 (16%)
Query: 178 KVRLENEKEGF--PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFE 235
KV +++ K+G P + E +++QL H+ +V L +VT + Y++ E
Sbjct: 39 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----------IYIITE 87
Query: 236 YMDHDLMGLLESGMVDFNEVNNA---------SIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
YM++ +VDF + + + Q+ +G+++ +RN++HRD++ +NI
Sbjct: 88 YMEN-------GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 140
Query: 287 LMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
L+++ K+ADFGLARL + K W P + G + DVWS G
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG--TFTIKSDVWSFGI 198
Query: 347 ILGEL 351
+L E+
Sbjct: 199 LLTEI 203
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 31/185 (16%)
Query: 178 KVRLENEKEGF--PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFE 235
KV +++ K+G P + E +++QL H+ +V L +VT + Y++ E
Sbjct: 41 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----------IYIITE 89
Query: 236 YMDHDLMGLLESGMVDFNEVNNA---------SIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
YM++ +VDF + + + Q+ +G+++ +RN++HRD++ +NI
Sbjct: 90 YMEN-------GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 142
Query: 287 LMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
L+++ K+ADFGLARL + K W P + G + DVWS G
Sbjct: 143 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG--TFTIKSDVWSFGI 200
Query: 347 ILGEL 351
+L E+
Sbjct: 201 LLTEI 205
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 130 MEMQAAAPIQSNSTNNSSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFP 189
+E++ A + + S M PL +G +V ++ V +K ++ E E
Sbjct: 10 VELEGLAACEGEYSQKYST--MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCW 67
Query: 190 I------TAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMG 243
I EI IL ++ H NI+ + LD +++G F LV M+ G
Sbjct: 68 IEDPKLGKVTLEIAILSRVEHANIIKV----------LDIFENQGFFQLV---MEKHGSG 114
Query: 244 LLESGMVD----FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADF 299
L +D +E + I RQL+ + Y ++ +HRDIK NI++ +KL DF
Sbjct: 115 LDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDF 174
Query: 300 GLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
G A +R + + T+ Y PE+L+G GP +++WS G L L ++ F
Sbjct: 175 GSAAYL---ERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 31/185 (16%)
Query: 178 KVRLENEKEGF--PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFE 235
KV +++ K+G P + E +++QL H+ +V L +VT + Y++ E
Sbjct: 44 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----------IYIITE 92
Query: 236 YMDHDLMGLLESGMVDFNEVNNA---------SIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
YM++ +VDF + + + Q+ +G+++ +RN++HRD++ +NI
Sbjct: 93 YMEN-------GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 145
Query: 287 LMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
L+++ K+ADFGLARL + K W P + G + DVWS G
Sbjct: 146 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG--TFTIKSDVWSFGI 203
Query: 347 ILGEL 351
+L E+
Sbjct: 204 LLTEI 208
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 106/230 (46%), Gaps = 33/230 (14%)
Query: 141 NSTNN-SSRPLM---EPLAAGGLSL------NNFSVSLFTDELVALKKVRLENEKEGFPI 190
N TNN RP+ + GG + NN +V++ +L A+ + E K+ F
Sbjct: 22 NVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAV--KKLAAMVDITTEELKQQFD- 78
Query: 191 TAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH----DLMGLLE 246
+EIK++ + H+N+V L L F D LV+ YM + D + L+
Sbjct: 79 ---QEIKVMAKCQHENLVEL----------LGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 125
Query: 247 SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYN 306
G + I + +G+++ H+ + +HRDIK +NIL++ K++DFGLAR
Sbjct: 126 -GTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 307 AEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKP 356
+ + V T Y PE L GE P D++S G +L E+ P
Sbjct: 185 KFAQTVMXSRIVGTTAYMAPEALRGE--ITPKSDIYSFGVVLLEIITGLP 232
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 31/185 (16%)
Query: 178 KVRLENEKEGF--PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFE 235
KV +++ K+G P + E +++QL H+ +V L +VT + Y++ E
Sbjct: 40 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----------IYIITE 88
Query: 236 YMDHDLMGLLESGMVDFNEVNNA---------SIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
YM++ +VDF + + + Q+ +G+++ +RN++HRD++ +NI
Sbjct: 89 YMEN-------GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 141
Query: 287 LMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
L+++ K+ADFGLARL + K W P + G + DVWS G
Sbjct: 142 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG--TFTIKSDVWSFGI 199
Query: 347 ILGEL 351
+L E+
Sbjct: 200 LLTEI 204
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 31/185 (16%)
Query: 178 KVRLENEKEGF--PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFE 235
KV +++ K+G P + E +++QL H+ +V L +VT + Y++ E
Sbjct: 45 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----------IYIITE 93
Query: 236 YMDHDLMGLLESGMVDFNEVNNA---------SIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
YM++ +VDF + + + Q+ +G+++ +RN++HRD++ +NI
Sbjct: 94 YMEN-------GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 146
Query: 287 LMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
L+++ K+ADFGLARL + K W P + G + DVWS G
Sbjct: 147 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG--TFTIKSDVWSFGI 204
Query: 347 ILGEL 351
+L E+
Sbjct: 205 LLTEI 209
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 31/185 (16%)
Query: 178 KVRLENEKEGF--PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFE 235
KV +++ K+G P + E +++QL H+ +V L +VT + Y++ E
Sbjct: 39 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----------IYIITE 87
Query: 236 YMDHDLMGLLESGMVDFNEVNNA---------SIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
YM++ +VDF + + + Q+ +G+++ +RN++HRD++ +NI
Sbjct: 88 YMEN-------GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 140
Query: 287 LMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
L+++ K+ADFGLARL + K W P + G + DVWS G
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG--TFTIKSDVWSFGI 198
Query: 347 ILGEL 351
+L E+
Sbjct: 199 LLTEI 203
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 22/208 (10%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPI--TAVREIKILRQLNHKNI 207
++ + +G + T ELVA+K + + G I REI R L H NI
Sbjct: 24 FVKDIGSGNFGVARLMRDKLTKELVAVKYI-----ERGAAIDENVQREIINHRSLRHPNI 78
Query: 208 VNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDG 267
V +E++ + ++ EY + F+E +QLL G
Sbjct: 79 VRFKEVILTPT----------HLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSG 128
Query: 268 LSYCHKRNFLHRDIKCSNILMNNR--GEVKLADFGLARLYNAEDRQRPYTNKVITLWYRP 325
+SYCH HRD+K N L++ +K+ DFG ++ + + + V T Y
Sbjct: 129 VSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIA 185
Query: 326 PELLLGEERYGPAIDVWSCGCILGELFV 353
PE+LL +E G DVWSCG L + V
Sbjct: 186 PEVLLRQEYDGKIADVWSCGVTLYVMLV 213
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
++E L G ++ T ++VA+K+V +E++ + ++EI I++Q + ++V
Sbjct: 33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEI----IKEISIMQQCDSPHVVK 88
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMD----HDLMGLLESGMVDFNEVNNASIMRQLL 265
+D ++V EY D++ L + + +E+ A+I++ L
Sbjct: 89 YYGSYFKNTD----------LWIVMEYCGAGSVSDIIRLRNKTLTE-DEI--ATILQSTL 135
Query: 266 DGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYR 324
GL Y H +HRDIK NIL+N G KLADFG+A +R N VI T ++
Sbjct: 136 KGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKR---NXVIGTPFWM 192
Query: 325 PPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
PE ++ E Y D+WS G E+ KP +
Sbjct: 193 APE-VIQEIGYNCVADIWSLGITAIEMAEGKPPY 225
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 31/185 (16%)
Query: 178 KVRLENEKEGF--PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFE 235
KV +++ K+G P + E +++QL H+ +V L +VT + Y++ E
Sbjct: 39 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----------IYIITE 87
Query: 236 YMDHDLMGLLESGMVDFNEVNNA---------SIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
YM++ +VDF + + + Q+ +G+++ +RN++HRD++ +NI
Sbjct: 88 YMEN-------GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 140
Query: 287 LMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
L+++ K+ADFGLARL + K W P + G + DVWS G
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG--TFTIKSDVWSFGI 198
Query: 347 ILGEL 351
+L E+
Sbjct: 199 LLTEI 203
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 154 LAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLRE- 212
+ G + + + +LVA+KK+ L ++ + E+ I+R H+N+V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYNS 216
Query: 213 -IVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYC 271
+V D+ ++V E+++ + + + NE A++ +L LS
Sbjct: 217 YLVGDE------------LWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVL 263
Query: 272 HKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLG 331
H + +HRDIK +IL+ + G VKL+DFG + E +R V T ++ PE L+
Sbjct: 264 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPE-LIS 320
Query: 332 EERYGPAIDVWSCGCILGELFVKKPLF 358
YGP +D+WS G ++ E+ +P +
Sbjct: 321 RLPYGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 31/185 (16%)
Query: 178 KVRLENEKEGF--PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFE 235
KV +++ K+G P + E +++QL H+ +V L +VT + Y++ E
Sbjct: 34 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----------IYIITE 82
Query: 236 YMDHDLMGLLESGMVDFNEVNNA---------SIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
YM++ +VDF + + + Q+ +G+++ +RN++HRD++ +NI
Sbjct: 83 YMEN-------GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 135
Query: 287 LMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
L+++ K+ADFGLARL + K W P + G + DVWS G
Sbjct: 136 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG--TFTIKSDVWSFGI 193
Query: 347 ILGEL 351
+L E+
Sbjct: 194 LLTEI 198
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 95/222 (42%), Gaps = 19/222 (8%)
Query: 135 AAPIQSNSTNNSSR-PLMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAV 193
A P+ ++S R L++ + AG + +ELVA+K + E
Sbjct: 7 AGPMDLPIMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIE---RGEKIDENVK 63
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFN 253
REI R L H NIV +E++ + +V EY + F+
Sbjct: 64 REIINHRSLRHPNIVRFKEVILTPT----------HLAIVMEYASGGELFERICNAGRFS 113
Query: 254 EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR--GEVKLADFGLARLYNAEDRQ 311
E +QL+ G+SY H HRD+K N L++ +K+ADFG ++ +
Sbjct: 114 EDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP 173
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ + V T Y PE+LL +E G DVWSCG L + V
Sbjct: 174 K---SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 212
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 29/175 (16%)
Query: 189 PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESG 248
P ++E +++++L H+ +V L +V+++ +V EYM +
Sbjct: 47 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----------IXIVTEYMS-------KGS 88
Query: 249 MVDFNEVNNASIMR---------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADF 299
++DF + +R Q+ G++Y + N++HRD++ +NIL+ K+ADF
Sbjct: 89 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 148
Query: 300 GLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
GLARL + K W P L G R+ DVWS G +L EL K
Sbjct: 149 GLARLIEDNEXTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 201
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 33/230 (14%)
Query: 141 NSTNN-SSRPLM---EPLAAGGLSL------NNFSVSLFTDELVALKKVRLENEKEGFPI 190
N TNN RP+ + GG + NN +V++ +L A+ + E K+ F
Sbjct: 16 NVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAV--KKLAAMVDITTEELKQQFD- 72
Query: 191 TAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH----DLMGLLE 246
+EIK++ + H+N+V L L F D LV+ YM + D + L+
Sbjct: 73 ---QEIKVMAKCQHENLVEL----------LGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 119
Query: 247 SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYN 306
G + I + +G+++ H+ + +HRDIK +NIL++ K++DFGLAR
Sbjct: 120 -GTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASE 178
Query: 307 AEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKP 356
+ V T Y PE L GE P D++S G +L E+ P
Sbjct: 179 KFAQXVMXXRIVGTTAYMAPEALRGE--ITPKSDIYSFGVVLLEIITGLP 226
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 33/230 (14%)
Query: 141 NSTNN-SSRPLM---EPLAAGGLSL------NNFSVSLFTDELVALKKVRLENEKEGFPI 190
N TNN RP+ + GG + NN +V++ +L A+ + E K+ F
Sbjct: 22 NVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAV--KKLAAMVDITTEELKQQFD- 78
Query: 191 TAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH----DLMGLLE 246
+EIK++ + H+N+V L L F D LV+ YM + D + L+
Sbjct: 79 ---QEIKVMAKCQHENLVEL----------LGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 125
Query: 247 SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYN 306
G + I + +G+++ H+ + +HRDIK +NIL++ K++DFGLAR
Sbjct: 126 -GTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 307 AEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKP 356
+ V T Y PE L GE P D++S G +L E+ P
Sbjct: 185 KFAQTVMXXRIVGTTAYMAPEALRGE--ITPKSDIYSFGVVLLEIITGLP 232
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L E + GG + + + T E+VA+K + P EI+ L+ L H++I
Sbjct: 14 LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKT-EIEALKNLRHQHICQ 72
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLS 269
L ++ + ++V EY + +E + RQ++ ++
Sbjct: 73 LYHVL----------ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVA 122
Query: 270 YCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNK-------VITLW 322
Y H + + HRD+K N+L + ++KL DFGL +P NK +L
Sbjct: 123 YVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLC--------AKPKGNKDYHLQTCCGSLA 174
Query: 323 YRPPELLLGEERYGPAIDVWSCGCIL 348
Y PEL+ G+ G DVWS G +L
Sbjct: 175 YAAPELIQGKSYLGSEADVWSMGILL 200
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 51 IHRRRLREEFSL---MPPGALDLLDKMLELDPERRITAEQALKSVWL 94
++++ +R ++ + + P ++ LL +ML++DP++RI+ + L W+
Sbjct: 218 LYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWI 264
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 26/224 (11%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L+ L G S + + + VA+K VR + + + A EIK+L+++N + N
Sbjct: 23 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDAD--N 77
Query: 210 LREIVTDKSDAL---DFRKDKG----SFYLVFEYMDHDLMGLLES-GMVDFNEVNNASIM 261
+E + L D KG +VFE + +L+ L++ + I
Sbjct: 78 TKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQIS 137
Query: 262 RQLLDGLSYCHKR-NFLHRDIKCSNILMN------NRGEVKLADFGLARLYNAEDRQRPY 314
+QLL GL Y H+R +H DIK N+LM N ++K+AD G A Y+ Y
Sbjct: 138 KQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH-----Y 192
Query: 315 TNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
TN + T YR PE+LLG +G D+WS C++ EL LF
Sbjct: 193 TNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLF 235
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 18/206 (8%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ + +G + ++ELVA+K + E REI R L H NIV
Sbjct: 22 LVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIDENVKREIINHRSLRHPNIVR 78
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLS 269
+E++ + +V EY + F+E +QL+ G+S
Sbjct: 79 FKEVILTPT----------HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 128
Query: 270 YCHKRNFLHRDIKCSNILMNNR--GEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPE 327
YCH HRD+K N L++ +K+ DFG ++ + + + V T Y PE
Sbjct: 129 YCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPE 185
Query: 328 LLLGEERYGPAIDVWSCGCILGELFV 353
+LL +E G DVWSCG L + V
Sbjct: 186 VLLKKEYDGKVADVWSCGVTLYVMLV 211
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 24/186 (12%)
Query: 174 VALKKVRL---ENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
VA+K +++ E ++ F + E I+ Q +H NI+ L +VT +
Sbjct: 76 VAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPNIIRLEGVVTKSKPVM--------- 122
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
+V EYM++ L L F + ++R + G+ Y F+HRD+ NIL+N
Sbjct: 123 -IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILIN 181
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTN---KVITLWYRPPELLLGEERYGPAIDVWSCGC 346
+ K++DFGL+R+ +D + YT K+ W P + ++ A DVWS G
Sbjct: 182 SNLVCKVSDFGLSRVLE-DDPEAAYTTRGGKIPIRWTSPEA--IAYRKFTSASDVWSYGI 238
Query: 347 ILGELF 352
+L E+
Sbjct: 239 VLWEVM 244
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 26/224 (11%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L+ L G S + + + VA+K VR + + + A EIK+L+++N + N
Sbjct: 23 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDAD--N 77
Query: 210 LREIVTDKSDAL---DFRKDKG----SFYLVFEYMDHDLMGLLES-GMVDFNEVNNASIM 261
+E + L D KG +VFE + +L+ L++ + I
Sbjct: 78 TKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQIS 137
Query: 262 RQLLDGLSYCHKR-NFLHRDIKCSNILMN------NRGEVKLADFGLARLYNAEDRQRPY 314
+QLL GL Y H+R +H DIK N+LM N ++K+AD G A Y+ Y
Sbjct: 138 KQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH-----Y 192
Query: 315 TNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
TN + T YR PE+LLG +G D+WS C++ EL LF
Sbjct: 193 TNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLF 235
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 22/212 (10%)
Query: 152 EPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLR 211
E L G S + T +L A+K + + K G + EI +LR++ H+NIV L
Sbjct: 28 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALK-GKESSIENEIAVLRKIKHENIVALE 86
Query: 212 EIVTDKSDALDFRKDKGSFYLVFEYMDHDLM--GLLESGMVDFNEVNNASIMRQLLDGLS 269
+I + YLV + + + ++E G + E + ++++RQ+LD +
Sbjct: 87 DIY----------ESPNHLYLVMQLVSGGELFDRIVEKGF--YTEKDASTLIRQVLDAVY 134
Query: 270 YCHKRNFLHRDIKCSNILMNNRGE---VKLADFGLARLYNAEDRQRPYTNKVITLWYRPP 326
Y H+ +HRD+K N+L ++ E + ++DFGL+++ E + + T Y P
Sbjct: 135 YLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGKGDVMSTACGTPGYVAP 191
Query: 327 ELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
E +L ++ Y A+D WS G I L P F
Sbjct: 192 E-VLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 16/112 (14%)
Query: 3 SGGRGNSGWANIELLQLEVISKL--CGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEF 60
S G G+ E+L + SK C + + + P ++ K+ + L+ E+
Sbjct: 180 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEY 239
Query: 61 SLMPP-------GALDLLDKMLELDPERRITAEQALKSVWL-------KNVH 98
P A D + ++E DP +R T EQA + W+ KN+H
Sbjct: 240 EFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALNKNIH 291
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 24/202 (11%)
Query: 152 EPLAAGGLSLNNFSVSLFTDELVALKKV--RLENEKEGFPITAVREIKILRQLNHKNIVN 209
+PL G S+ V +++ A+K + R+E + ITA++ + H NIV
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK-EITALKLCE-----GHPNIVK 70
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLS 269
L E+ D+ +LV E ++ + F+E + IMR+L+ +S
Sbjct: 71 LHEVFHDQLHT----------FLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVS 120
Query: 270 YCHKRNFLHRDIKCSNILM---NNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPP 326
+ H +HRD+K N+L N+ E+K+ DFG ARL ++ +P TL Y P
Sbjct: 121 HMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--QPLKTPCFTLHYAAP 178
Query: 327 ELLLGEERYGPAIDVWSCGCIL 348
E LL + Y + D+WS G IL
Sbjct: 179 E-LLNQNGYDESCDLWSLGVIL 199
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 24/186 (12%)
Query: 174 VALKKVRL---ENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
VA+K +++ E ++ F + E I+ Q +H NI+ L +VT +
Sbjct: 76 VAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPNIIRLEGVVTKSKPVM--------- 122
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
+V EYM++ L L F + ++R + G+ Y ++HRD+ NIL+N
Sbjct: 123 -IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 181
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTN---KVITLWYRPPELLLGEERYGPAIDVWSCGC 346
+ K++DFGLAR+ +D + YT K+ W P + ++ A DVWS G
Sbjct: 182 SNLVCKVSDFGLARVLE-DDPEAAYTTRGGKIPIRWTSPEA--IAYRKFTSASDVWSYGI 238
Query: 347 ILGELF 352
+L E+
Sbjct: 239 VLWEVM 244
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 154 LAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLRE- 212
+ G + + + +LVA+KK+ L ++ + E+ I+R H+N+V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYNS 139
Query: 213 -IVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYC 271
+V D+ ++V E+++ + + + NE A++ +L LS
Sbjct: 140 YLVGDE------------LWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVL 186
Query: 272 HKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLG 331
H + +HRDIK +IL+ + G VKL+DFG + E +R V T ++ PE L+
Sbjct: 187 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPE-LIS 243
Query: 332 EERYGPAIDVWSCGCILGELFVKKPLF 358
YGP +D+WS G ++ E+ +P +
Sbjct: 244 RLPYGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 96/191 (50%), Gaps = 20/191 (10%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLRE--IVTDKSDALDFRKDK 227
+ +LVA+KK+ L ++ + E+ I+R H+N+V + +V D+
Sbjct: 55 SGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYNSYLVGDE---------- 102
Query: 228 GSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
++V E+++ + + + NE A++ +L LS H + +HRDIK +IL
Sbjct: 103 --LWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSIL 159
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+ + G VKL+DFG + E +R V T ++ PE L+ YGP +D+WS G +
Sbjct: 160 LTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPE-LISRLPYGPEVDIWSLGIM 216
Query: 348 LGELFVKKPLF 358
+ E+ +P +
Sbjct: 217 VIEMVDGEPPY 227
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 154 LAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLRE- 212
+ G + + + +LVA+KK+ L ++ + E+ I+R H+N+V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYNS 94
Query: 213 -IVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYC 271
+V D+ ++V E+++ + + + NE A++ +L LS
Sbjct: 95 YLVGDE------------LWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVL 141
Query: 272 HKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLG 331
H + +HRDIK +IL+ + G VKL+DFG + E +R V T ++ PE L+
Sbjct: 142 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPE-LIS 198
Query: 332 EERYGPAIDVWSCGCILGELFVKKPLF 358
YGP +D+WS G ++ E+ +P +
Sbjct: 199 RLPYGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 191 TAVREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGM 249
++E+ ILR+++ H NI+ L+ D + F+LVF+ M + +
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLK----------DTYETNTFFFLVFDLMKKGELFDYLTEK 118
Query: 250 VDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAED 309
V +E IMR LL+ + HK N +HRD+K NIL+++ +KL DFG + + +
Sbjct: 119 VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 178
Query: 310 RQRPYTNKVITLWYRPPELLL-----GEERYGPAIDVWSCGCILGELFVKKPLF 358
+ R T Y PE++ YG +D+WS G I+ L P F
Sbjct: 179 KLRSVCG---TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 19/193 (9%)
Query: 175 ALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDA---LDFRKDKGSFY 231
A+KK+R EK T + E+ +L LNH+ +V ++ + + K K + +
Sbjct: 35 AIKKIRHTEEKLS---TILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLF 91
Query: 232 LVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
+ EY ++ L L+ S ++ + RQ+L+ LSY H + +HRD+K NI ++
Sbjct: 92 IQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDE 151
Query: 291 RGEVKLADFGLAR-------LYNAEDRQRP-----YTNKVITLWYRPPELLLGEERYGPA 338
VK+ DFGLA+ + + + P T+ + T Y E+L G Y
Sbjct: 152 SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEK 211
Query: 339 IDVWSCGCILGEL 351
ID++S G I E+
Sbjct: 212 IDMYSLGIIFFEM 224
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
EI I R L H+++V F +D ++V E + L E
Sbjct: 91 EISIHRSLAHQHVVGFH----------GFFEDNDFVFVVLELCRRRSLLELHKRRKALTE 140
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY 314
+RQ++ G Y H+ +HRD+K N+ +N EVK+ DFGLA + ++
Sbjct: 141 PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK-- 198
Query: 315 TNKVI--TLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
KV+ T Y PE +L ++ + +DVWS GCI+ L V KP F
Sbjct: 199 --KVLCGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 241
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 96/191 (50%), Gaps = 20/191 (10%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLRE--IVTDKSDALDFRKDK 227
+ +LVA+KK+ L ++ + E+ I+R H+N+V + +V D+
Sbjct: 44 SGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYNSYLVGDE---------- 91
Query: 228 GSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
++V E+++ + + + NE A++ +L LS H + +HRDIK +IL
Sbjct: 92 --LWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSIL 148
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+ + G VKL+DFG + E +R V T ++ PE L+ YGP +D+WS G +
Sbjct: 149 LTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPE-LISRLPYGPEVDIWSLGIM 205
Query: 348 LGELFVKKPLF 358
+ E+ +P +
Sbjct: 206 VIEMVDGEPPY 216
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 19/193 (9%)
Query: 175 ALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDA---LDFRKDKGSFY 231
A+KK+R EK T + E+ +L LNH+ +V ++ + + K K + +
Sbjct: 35 AIKKIRHTEEKLS---TILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLF 91
Query: 232 LVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
+ EY ++ L L+ S ++ + RQ+L+ LSY H + +HRD+K NI ++
Sbjct: 92 IQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDE 151
Query: 291 RGEVKLADFGLAR-------LYNAEDRQRP-----YTNKVITLWYRPPELLLGEERYGPA 338
VK+ DFGLA+ + + + P T+ + T Y E+L G Y
Sbjct: 152 SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEK 211
Query: 339 IDVWSCGCILGEL 351
ID++S G I E+
Sbjct: 212 IDMYSLGIIFFEM 224
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 58 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIITEFMTYGNLLDYLRECNRQ 107
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ N V + Q+ + Y K+NF+HRD+ N L+ VK+ADFGL+RL +
Sbjct: 108 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 167
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
P K W P L ++ DVW+ G +L E+
Sbjct: 168 TAPAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 206
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 96/191 (50%), Gaps = 20/191 (10%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLRE--IVTDKSDALDFRKDK 227
+ +LVA+KK+ L ++ + E+ I+R H+N+V + +V D+
Sbjct: 48 SGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYNSYLVGDE---------- 95
Query: 228 GSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
++V E+++ + + + NE A++ +L LS H + +HRDIK +IL
Sbjct: 96 --LWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSIL 152
Query: 288 MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+ + G VKL+DFG + E +R V T ++ PE L+ YGP +D+WS G +
Sbjct: 153 LTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPE-LISRLPYGPEVDIWSLGIM 209
Query: 348 LGELFVKKPLF 358
+ E+ +P +
Sbjct: 210 VIEMVDGEPPY 220
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
EI I R L H+++V F +D ++V E + L E
Sbjct: 89 EISIHRSLAHQHVVGFH----------GFFEDNDFVFVVLELCRRRSLLELHKRRKALTE 138
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY 314
+RQ++ G Y H+ +HRD+K N+ +N EVK+ DFGLA + ++
Sbjct: 139 PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK-- 196
Query: 315 TNKVI--TLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
KV+ T Y PE +L ++ + +DVWS GCI+ L V KP F
Sbjct: 197 --KVLCGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 239
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIITEFMTYGNLLDYLRECNRQ 108
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ N V + Q+ + Y K+NF+HRD+ N L+ VK+ADFGL+RL +
Sbjct: 109 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 168
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
P K W P L ++ DVW+ G +L E+
Sbjct: 169 TAPAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 207
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 191 TAVREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGM 249
++E+ ILR+++ H NI+ L+ D + F+LVF+ M + +
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLK----------DTYETNTFFFLVFDLMKKGELFDYLTEK 118
Query: 250 VDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAED 309
V +E IMR LL+ + HK N +HRD+K NIL+++ +KL DFG + + +
Sbjct: 119 VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 178
Query: 310 RQRPYTNKVITLWYRPPELLL-----GEERYGPAIDVWSCGCILGELFVKKPLF 358
+ R T Y PE++ YG +D+WS G I+ L P F
Sbjct: 179 KLREVCG---TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
EI I R L H+++V F +D ++V E + L E
Sbjct: 71 EISIHRSLAHQHVVGFH----------GFFEDNDFVFVVLELCRRRSLLELHKRRKALTE 120
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARL--YNAEDRQR 312
+RQ++ G Y H+ +HRD+K N+ +N EVK+ DFGLA Y+ E ++
Sbjct: 121 PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK- 179
Query: 313 PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
T Y PE +L ++ + +DVWS GCI+ L V KP F
Sbjct: 180 ---TLCGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 221
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 191 TAVREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGM 249
++E+ ILR+++ H NI+ L+ D + F+LVF+ M + +
Sbjct: 56 ATLKEVDILRKVSGHPNIIQLK----------DTYETNTFFFLVFDLMKKGELFDYLTEK 105
Query: 250 VDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAED 309
V +E IMR LL+ + HK N +HRD+K NIL+++ +KL DFG + + +
Sbjct: 106 VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 165
Query: 310 RQRPYTNKVITLWYRPPELLL-----GEERYGPAIDVWSCGCILGELFVKKPLF 358
+ R T Y PE++ YG +D+WS G I+ L P F
Sbjct: 166 KLREVCG---TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 24/186 (12%)
Query: 174 VALKKVRL---ENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
VA+K +++ E ++ F + E I+ Q +H NI+ L +VT +
Sbjct: 47 VAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPNIIRLEGVVTKSKPVM--------- 93
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
+V EYM++ L L F + ++R + G+ Y ++HRD+ NIL+N
Sbjct: 94 -IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 152
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTN---KVITLWYRPPELLLGEERYGPAIDVWSCGC 346
+ K++DFGL+R+ +D + YT K+ W P + ++ A DVWS G
Sbjct: 153 SNLVCKVSDFGLSRVLE-DDPEAAYTTRGGKIPIRWTSPEA--IAYRKFTSASDVWSYGI 209
Query: 347 ILGELF 352
+L E+
Sbjct: 210 VLWEVM 215
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 24/186 (12%)
Query: 174 VALKKVRL---ENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
VA+K +++ E ++ F + E I+ Q +H NI+ L +VT +
Sbjct: 64 VAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPNIIRLEGVVTKSKPVM--------- 110
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
+V EYM++ L L F + ++R + G+ Y ++HRD+ NIL+N
Sbjct: 111 -IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 169
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTN---KVITLWYRPPELLLGEERYGPAIDVWSCGC 346
+ K++DFGL+R+ +D + YT K+ W P + ++ A DVWS G
Sbjct: 170 SNLVCKVSDFGLSRVLE-DDPEAAYTTRGGKIPIRWTSPEA--IAYRKFTSASDVWSYGI 226
Query: 347 ILGELF 352
+L E+
Sbjct: 227 VLWEVM 232
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
EI I R L H+++V F +D ++V E + L E
Sbjct: 65 EISIHRSLAHQHVVGFH----------GFFEDNDFVFVVLELCRRRSLLELHKRRKALTE 114
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY 314
+RQ++ G Y H+ +HRD+K N+ +N EVK+ DFGLA + ++
Sbjct: 115 PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK-- 172
Query: 315 TNKVI--TLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
KV+ T Y PE +L ++ + +DVWS GCI+ L V KP F
Sbjct: 173 --KVLCGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 215
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 31/185 (16%)
Query: 178 KVRLENEKEGF--PITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFE 235
KV +++ K+G P + E +++QL H+ +V L +VT + Y++ E
Sbjct: 35 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----------IYIITE 83
Query: 236 YMDHDLMGLLESGMVDFNEVNNA---------SIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
YM++ +VDF + + + Q+ +G+++ +RN++HR+++ +NI
Sbjct: 84 YMEN-------GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANI 136
Query: 287 LMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
L+++ K+ADFGLARL + K W P + G + DVWS G
Sbjct: 137 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG--TFTIKSDVWSFGI 194
Query: 347 ILGEL 351
+L E+
Sbjct: 195 LLTEI 199
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
EI I R L H+++V F +D ++V E + L E
Sbjct: 67 EISIHRSLAHQHVVGFH----------GFFEDNDFVFVVLELCRRRSLLELHKRRKALTE 116
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARL--YNAEDRQR 312
+RQ++ G Y H+ +HRD+K N+ +N EVK+ DFGLA Y+ E ++
Sbjct: 117 PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK- 175
Query: 313 PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
T Y PE +L ++ + +DVWS GCI+ L V KP F
Sbjct: 176 ---TLCGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 24/186 (12%)
Query: 174 VALKKVRL---ENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
VA+K +++ E ++ F + E I+ Q +H NI+ L +VT +
Sbjct: 76 VAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPNIIRLEGVVTKSKPVM--------- 122
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
+V EYM++ L L F + ++R + G+ Y ++HRD+ NIL+N
Sbjct: 123 -IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 181
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTN---KVITLWYRPPELLLGEERYGPAIDVWSCGC 346
+ K++DFGL+R+ +D + YT K+ W P + ++ A DVWS G
Sbjct: 182 SNLVCKVSDFGLSRVLE-DDPEAAYTTRGGKIPIRWTSPEA--IAYRKFTSASDVWSYGI 238
Query: 347 ILGELF 352
+L E+
Sbjct: 239 VLWEVM 244
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
EI I R L H+++V F +D ++V E + L E
Sbjct: 67 EISIHRSLAHQHVVGFH----------GFFEDNDFVFVVLELCRRRSLLELHKRRKALTE 116
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARL--YNAEDRQR 312
+RQ++ G Y H+ +HRD+K N+ +N EVK+ DFGLA Y+ E ++
Sbjct: 117 PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK- 175
Query: 313 PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
T Y PE +L ++ + +DVWS GCI+ L V KP F
Sbjct: 176 ---TLCGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 24/186 (12%)
Query: 174 VALKKVRL---ENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
VA+K +++ E ++ F + E I+ Q +H NI+ L +VT +
Sbjct: 74 VAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPNIIRLEGVVTKSKPVM--------- 120
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
+V EYM++ L L F + ++R + G+ Y ++HRD+ NIL+N
Sbjct: 121 -IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 179
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTN---KVITLWYRPPELLLGEERYGPAIDVWSCGC 346
+ K++DFGL+R+ +D + YT K+ W P + ++ A DVWS G
Sbjct: 180 SNLVCKVSDFGLSRVLE-DDPEAAYTTRGGKIPIRWTSPEA--IAYRKFTSASDVWSYGI 236
Query: 347 ILGELF 352
+L E+
Sbjct: 237 VLWEVM 242
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
RE ++ +L+H V L F+ D+ Y Y + + +
Sbjct: 79 VTRERDVMSRLDHPFFVKLY---------FTFQDDE-KLYFGLSYAKNGCLLKYIRKIGS 128
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ V T Y PELL E+ + D+W+ GCI+ +L P F
Sbjct: 189 ARANSFVGTAQYVSPELLT-EKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 38/198 (19%)
Query: 170 TDELVALKKVRLE---NEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKD 226
T E+VA+K ++ + + G+ +EI ILR L H++I+ + D A
Sbjct: 59 TGEMVAVKALKADAGPQHRSGWK----QEIDILRTLYHEHIIKYKGCCEDAGAA------ 108
Query: 227 KGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIM---RQLLDGLSYCHKRNFLHRDIKC 283
S LV EY+ +G L + + + A ++ +Q+ +G++Y H ++++HRD+
Sbjct: 109 --SLQLVMEYVP---LGSLRD-YLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAA 162
Query: 284 SNILMNNRGEVKLADFGLAR-------LYNA-EDRQRPYTNKVITLWYRPPELLLGEERY 335
N+L++N VK+ DFGLA+ Y ED P WY P L E ++
Sbjct: 163 RNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSP------VFWYAPE--CLKEYKF 214
Query: 336 GPAIDVWSCGCILGELFV 353
A DVWS G L EL
Sbjct: 215 YYASDVWSFGVTLYELLT 232
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 24/186 (12%)
Query: 174 VALKKVRL---ENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
VA+K +++ E ++ F + E I+ Q +H NI+ L +VT +
Sbjct: 76 VAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPNIIRLEGVVTKSKPVM--------- 122
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
+V EYM++ L L F + ++R + G+ Y ++HRD+ NIL+N
Sbjct: 123 -IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 181
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTN---KVITLWYRPPELLLGEERYGPAIDVWSCGC 346
+ K++DFGL+R+ +D + YT K+ W P + ++ A DVWS G
Sbjct: 182 SNLVCKVSDFGLSRVLE-DDPEAAYTTRGGKIPIRWTSPEA--IAYRKFTSASDVWSYGI 238
Query: 347 ILGELF 352
+L E+
Sbjct: 239 VLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 24/186 (12%)
Query: 174 VALKKVRL---ENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
VA+K +++ E ++ F + E I+ Q +H NI+ L +VT +
Sbjct: 76 VAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPNIIRLEGVVTKSKPVM--------- 122
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
+V EYM++ L L F + ++R + G+ Y ++HRD+ NIL+N
Sbjct: 123 -IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 181
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTN---KVITLWYRPPELLLGEERYGPAIDVWSCGC 346
+ K++DFGL+R+ +D + YT K+ W P + ++ A DVWS G
Sbjct: 182 SNLVCKVSDFGLSRVLE-DDPEAAYTTRGGKIPIRWTSPEA--IAYRKFTSASDVWSYGI 238
Query: 347 ILGELF 352
+L E+
Sbjct: 239 VLWEVM 244
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 24/186 (12%)
Query: 174 VALKKVRL---ENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
VA+K +++ E ++ F + E I+ Q +H NI+ L +VT +
Sbjct: 76 VAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPNIIRLEGVVTKSKPVM--------- 122
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
+V EYM++ L L F + ++R + G+ Y ++HRD+ NIL+N
Sbjct: 123 -IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 181
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTN---KVITLWYRPPELLLGEERYGPAIDVWSCGC 346
+ K++DFGL+R+ +D + YT K+ W P + ++ A DVWS G
Sbjct: 182 SNLVCKVSDFGLSRVLE-DDPEAAYTTRGGKIPIRWTSPEA--IAYRKFTSASDVWSYGI 238
Query: 347 ILGELF 352
+L E+
Sbjct: 239 VLWEVM 244
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 89/194 (45%), Gaps = 15/194 (7%)
Query: 167 SLFTDELVALKKV-RLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRK 225
S+ T VA+K + + K G E+KI QL H +I+ L ++ +
Sbjct: 32 SIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILEL----------YNYFE 81
Query: 226 DKGSFYLVFEYMDHDLMG-LLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
D YLV E + M L++ + F+E M Q++ G+ Y H LHRD+ S
Sbjct: 82 DSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLS 141
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
N+L+ +K+ADFGLA ++ YT T Y PE + +G DVWS
Sbjct: 142 NLLLTRNMNIKIADFGLATQLKMP-HEKHYT-LCGTPNYISPE-IATRSAHGLESDVWSL 198
Query: 345 GCILGELFVKKPLF 358
GC+ L + +P F
Sbjct: 199 GCMFYTLLIGRPPF 212
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 24/186 (12%)
Query: 174 VALKKVRL---ENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
VA+K +++ E ++ F + E I+ Q +H NI+ L +VT +
Sbjct: 76 VAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPNIIRLEGVVTKSKPVM--------- 122
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
+V EYM++ L L F + ++R + G+ Y ++HRD+ NIL+N
Sbjct: 123 -IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 181
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTN---KVITLWYRPPELLLGEERYGPAIDVWSCGC 346
+ K++DFGL R+ +D + YT K+ W P + ++ A DVWS G
Sbjct: 182 SNLVCKVSDFGLGRVLE-DDPEAAYTTRGGKIPIRWTSPEA--IAYRKFTSASDVWSYGI 238
Query: 347 ILGELF 352
+L E+
Sbjct: 239 VLWEVM 244
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 71/128 (55%), Gaps = 6/128 (4%)
Query: 230 FYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
+++ EY+ + LL+ G ++ E A+I+R++L GL Y H +HRDIK +N+L+
Sbjct: 92 LWIIMEYLGGGSALDLLKPGPLE--ETYIATILREILKGLDYLHSERKIHRDIKAANVLL 149
Query: 289 NNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
+ +G+VKLADFG+A D Q V T ++ PE ++ + Y D+WS G
Sbjct: 150 SEQGDVKLADFGVAG--QLTDTQIKRNXFVGTPFWMAPE-VIKQSAYDFKADIWSLGITA 206
Query: 349 GELFVKKP 356
EL +P
Sbjct: 207 IELAKGEP 214
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 39/227 (17%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+E + +GG + + +++V+ NEK A RE+K L +L+H NIV+
Sbjct: 17 IELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEK------AEREVKALAKLDHVNIVHY 70
Query: 211 R----------EIVTDKSDALDF---------RKDKGSFYLVFEYMDHDLMGLLESGMVD 251
E D ++ D+ R ++ E+ D G LE +
Sbjct: 71 NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK---GTLEQWIEK 127
Query: 252 -----FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGL-ARLY 305
++V + Q+ G+ Y H + +HRD+K SNI + + +VK+ DFGL L
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLK 187
Query: 306 NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
N R R TL Y PE + ++ YG +D+++ G IL EL
Sbjct: 188 NDGKRTRSKG----TLRYMSPEQISSQD-YGKEVDLYALGLILAELL 229
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
RE ++ +L+H V L F+ D+ ++ + + +L+ + +
Sbjct: 80 VTRERDVMSRLDHPFFVKLY---------FTFQDDEKLYFGLSYAKNGELLKYIRK-IGS 129
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 130 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 189
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ V T Y PELL E+ + D+W+ GCI+ +L P F
Sbjct: 190 ARANSFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD-LMGLLESGMVD 251
+ E K++ L+H+ +V L + T + +++ EYM + L+ L
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTKQR----------PIFIITEYMANGCLLNYLREMRHR 116
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F + + + + + Y + FLHRD+ N L+N++G VK++DFGL+R Y +D +
Sbjct: 117 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEE 175
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+ + PPE+L+ ++ D+W+ G ++ E++
Sbjct: 176 TSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIY 215
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ + +G + ++ELVA+K + E REI R L H NIV
Sbjct: 23 LVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIDENVKREIINHRSLRHPNIVR 79
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLS 269
+E++ + +V EY + F+E +QL+ G+S
Sbjct: 80 FKEVILTPT----------HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 270 YCHKRNFLHRDIKCSNILMNNR--GEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPE 327
YCH HRD+K N L++ +K+ FG ++ + + + V T Y PE
Sbjct: 130 YCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPK---DTVGTPAYIAPE 186
Query: 328 LLLGEERYGPAIDVWSCGCILGELFV 353
+LL +E G DVWSCG L + V
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLV 212
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
L++ + +G + ++ELVA+K + E REI R L H NIV
Sbjct: 23 LVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIDENVKREIINHRSLRHPNIVR 79
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLS 269
+E++ + +V EY + F+E +QL+ G+S
Sbjct: 80 FKEVILTPT----------HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 270 YCHKRNFLHRDIKCSNILMNNR--GEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPE 327
YCH HRD+K N L++ +K+ FG ++ + + + V T Y PE
Sbjct: 130 YCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPK---STVGTPAYIAPE 186
Query: 328 LLLGEERYGPAIDVWSCGCILGELFV 353
+LL +E G DVWSCG L + V
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLV 212
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 33/230 (14%)
Query: 141 NSTNN-SSRPLM---EPLAAGGLSL------NNFSVSLFTDELVALKKVRLENEKEGFPI 190
N TNN RP+ GG + NN +V++ +L A+ + E K+ F
Sbjct: 13 NVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAV--KKLAAMVDITTEELKQQFD- 69
Query: 191 TAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH----DLMGLLE 246
+EIK+ + H+N+V L L F D LV+ Y + D + L+
Sbjct: 70 ---QEIKVXAKCQHENLVEL----------LGFSSDGDDLCLVYVYXPNGSLLDRLSCLD 116
Query: 247 SGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYN 306
G + I + +G+++ H+ + +HRDIK +NIL++ K++DFGLAR
Sbjct: 117 -GTPPLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASE 175
Query: 307 AEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKP 356
+ + V T Y PE L GE P D++S G +L E+ P
Sbjct: 176 KFAQXVXXSRIVGTTAYXAPEALRGE--ITPKSDIYSFGVVLLEIITGLP 223
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 84/182 (46%), Gaps = 21/182 (11%)
Query: 175 ALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
LK E ++ F + E I+ Q +H N+++L +VT + + ++
Sbjct: 68 TLKSGYTEKQRRDF----LSEASIMGQFDHPNVIHLEGVVTKSTPVM----------IIT 113
Query: 235 EYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
E+M++ L L F + ++R + G+ Y N++HRD+ NIL+N+
Sbjct: 114 EFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLV 173
Query: 294 VKLADFGLARLYNAEDRQRPYTN----KVITLWYRPPELLLGEERYGPAIDVWSCGCILG 349
K++DFGL+R + YT+ K+ W P + ++ A DVWS G ++
Sbjct: 174 CKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY--RKFTSASDVWSYGIVMW 231
Query: 350 EL 351
E+
Sbjct: 232 EV 233
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 154 LAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLRE- 212
+ G + + T + VA+KK+ L ++ + E+ I+R +H N+V++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELL--FNEVVIMRDYHHDNVVDMYSS 110
Query: 213 -IVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYC 271
+V D+ ++V E+++ + + + NE A++ +L LSY
Sbjct: 111 YLVGDE------------LWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYL 157
Query: 272 HKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLG 331
H + +HRDIK +IL+ + G +KL+DFG + E +R V T ++ PE ++
Sbjct: 158 HNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXL--VGTPYWMAPE-VIS 214
Query: 332 EERYGPAIDVWSCGCILGELFVKKP 356
YG +D+WS G ++ E+ +P
Sbjct: 215 RLPYGTEVDIWSLGIMVIEMIDGEP 239
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDF 252
RE ++ +L+H V L F+ D+ ++ + + +L+ + + F
Sbjct: 80 TRERDVMSRLDHPFFVKLY---------FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSF 129
Query: 253 NEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQR 312
+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 130 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 189
Query: 313 PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
V T Y PELL E+ + D+W+ GCI+ +L P F
Sbjct: 190 RANXFVGTAQYVSPELLT-EKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 11/212 (5%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKE-GFPITAVREIKILRQLNHKNIV 208
L E L GG+S + + L VA+K +R + ++ F + RE + LNH IV
Sbjct: 16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 209 NLREIVTDKSDALDFRKDKGSF-YLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDG 267
V D +A G Y+V EY+D + + ++
Sbjct: 76 ----AVYDTGEA---ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 268 LSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPP 326
L++ H+ +HRD+K +NIL++ VK+ DFG+AR T VI T Y P
Sbjct: 129 LNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSP 188
Query: 327 ELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
E G+ + DV+S GC+L E+ +P F
Sbjct: 189 EQARGDSVDARS-DVYSLGCVLYEVLTGEPPF 219
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 22/161 (13%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMV--- 250
EI++L+ L+H NI+ + E+ +D + Y+V E + +L+ + S
Sbjct: 70 EIEVLKSLDHPNIIKIFEVF----------EDYHNMYIVMETCEGGELLERIVSAQARGK 119
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN---RGEVKLADFGLARLYNA 307
+E A +M+Q+++ L+Y H ++ +H+D+K NIL + +K+ DFGLA L+ +
Sbjct: 120 ALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179
Query: 308 EDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
++ TN T Y PE+ + + D+WS G ++
Sbjct: 180 DEHS---TNAAGTALYMAPEVFKRDVTF--KCDIWSAGVVM 215
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 63 MPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
+ P A+DLL +ML DPERR +A Q L W K
Sbjct: 251 LTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
EI I + L++ ++V F +D Y+V E + L E
Sbjct: 92 EIAIHKSLDNPHVVGFH----------GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTE 141
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY 314
MRQ + G+ Y H +HRD+K N+ +N+ +VK+ DFGLA + ++
Sbjct: 142 PEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-- 199
Query: 315 TNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ T Y PE+L ++ + +D+WS GCIL L V KP F
Sbjct: 200 KDLCGTPNYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
RE ++ +L+H V L F+ D+ ++ + + +L+ + +
Sbjct: 80 VTRERDVMSRLDHPFFVKLY---------FTFQDDEKLYFGLSYAKNGELLKYIRK-IGS 129
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 130 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 189
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
V T Y PELL E+ + D+W+ GCI+ +L P F
Sbjct: 190 ARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 24/185 (12%)
Query: 174 VALKKVRL---ENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
VA+K +++ E ++ F + E I+ Q +H NI++L +VT +
Sbjct: 53 VAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPNIIHLEGVVTKSKPVM--------- 99
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
+V EYM++ L L+ F + ++R + G+ Y ++HRD+ NIL+N
Sbjct: 100 -IVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILIN 158
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTN---KVITLWYRPPELLLGEERYGPAIDVWSCGC 346
+ K++DFGL+R+ +D + YT K+ W P + ++ A DVWS G
Sbjct: 159 SNLVCKVSDFGLSRVLE-DDPEAAYTTRGGKIPIRWTAPEAIAF--RKFTSASDVWSYGI 215
Query: 347 ILGEL 351
++ E+
Sbjct: 216 VMWEV 220
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDF 252
RE ++ +L+H V L F+ D+ ++ + + +L+ + + F
Sbjct: 83 TRERDVMSRLDHPFFVKLY---------FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSF 132
Query: 253 NEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQR 312
+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 133 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 192
Query: 313 PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
V T Y PELL E+ + D+W+ GCI+ +L P F
Sbjct: 193 RANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
RE ++ +L+H V L F+ D+ ++ + + +L+ + +
Sbjct: 79 VTRERDVMSRLDHPFFVKLY---------FTFQDDEKLYFGLSYAKNGELLKYIRK-IGS 128
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
V T Y PELL E+ + D+W+ GCI+ +L P F
Sbjct: 189 ARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDF 252
RE ++ +L+H V L F+ D+ ++ + + +L+ + + F
Sbjct: 80 TRERDVMSRLDHPFFVKLY---------FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSF 129
Query: 253 NEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQR 312
+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 130 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 189
Query: 313 PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
V T Y PELL E+ + D+W+ GCI+ +L P F
Sbjct: 190 RANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
EI I + L++ ++V F +D Y+V E + L E
Sbjct: 92 EIAIHKSLDNPHVVGFH----------GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTE 141
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLA-RLYNAEDRQRP 313
MRQ + G+ Y H +HRD+K N+ +N+ +VK+ DFGLA ++ +R++
Sbjct: 142 PEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT 201
Query: 314 YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
T Y PE+L ++ + +D+WS GCIL L V KP F
Sbjct: 202 LCG---TPNYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVR-EIKILRQLNHKNIV 208
ME L +G S T +L ALK ++ + F +++ EI +L+++ H+NIV
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIK---KSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 209 NLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMG--LLESGMVDFNEVNNASIMRQLLD 266
L +I + +YLV + + + +LE G+ + E + + +++Q+L
Sbjct: 70 TLEDIYESTTH----------YYLVMQLVSGGELFDRILERGV--YTEKDASLVIQQVLS 117
Query: 267 GLSYCHKRNFLHRDIKCSNILM---NNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWY 323
+ Y H+ +HRD+K N+L ++ + DFGL+++ ++ + T Y
Sbjct: 118 AVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGY 173
Query: 324 RPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
PE +L ++ Y A+D WS G I L P F
Sbjct: 174 VAPE-VLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 63 MPPGALDLLDKMLELDPERRITAEQALKSVWL 94
+ A D + +LE DP R T E+AL W+
Sbjct: 234 ISESAKDFICHLLEKDPNERYTCEKALSHPWI 265
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 154 LAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREI 213
L G S + T +LVA+K + E EG + EI +L ++ H NIV L +I
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEA-LEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 214 VTDKSDALDFRKDKGSFYLVFEYMDHDLMG--LLESGMVDFNEVNNASIMRQLLDGLSYC 271
+ G YL+ + + + ++E G + E + + ++ Q+LD + Y
Sbjct: 85 Y----------ESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYL 132
Query: 272 HKRNFLHRDIKCSNIL---MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
H +HRD+K N+L ++ ++ ++DFGL+++ ED + T Y PE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPE- 188
Query: 329 LLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+L ++ Y A+D WS G I L P F
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 16/113 (14%)
Query: 2 FSGGRGNSGWANIELLQLEVISKL--CGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREE 59
S G G+ E+L + SK C + + + P ++ K+ + L+ E
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
Query: 60 FSLMPP-------GALDLLDKMLELDPERRITAEQALKSVWL-------KNVH 98
+ P A D + ++E DPE+R T EQAL+ W+ KN+H
Sbjct: 235 YEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIH 287
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
RE ++ +L+H V L F+ D+ ++ + + +L+ + +
Sbjct: 77 VTRERDVMSRLDHPFFVKLY---------FTFQDDEKLYFGLSYAKNGELLKYIRK-IGS 126
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 127 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 186
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
V T Y PELL E+ + D+W+ GCI+ +L P F
Sbjct: 187 ARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
RE ++ +L+H V L F+ D+ ++ + + +L+ + +
Sbjct: 77 VTRERDVMSRLDHPFFVKLY---------FTFQDDEKLYFGLSYAKNGELLKYIRK-IGS 126
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 127 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 186
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
V T Y PELL E+ + D+W+ GCI+ +L P F
Sbjct: 187 ARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 87/195 (44%), Gaps = 30/195 (15%)
Query: 170 TDELVALKKVRLENEKEGFPITAVR-EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E VA+K L+ E G I ++ EI+ILR L H+NIV + I T+ D G
Sbjct: 49 TGEQVAVKS--LKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---------DGG 97
Query: 229 S-FYLVFEYM-DHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
+ L+ E++ L L N Q+ G+ Y R ++HRD+ N+
Sbjct: 98 NGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNV 157
Query: 287 LMNNRGEVKLADFGLARLYNA--------EDRQRPYTNKVITLWYRPPELLLGEERYGPA 338
L+ + +VK+ DFGL + +DR P WY P L+ + ++ A
Sbjct: 158 LVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP------VFWYAPECLM--QSKFYIA 209
Query: 339 IDVWSCGCILGELFV 353
DVWS G L EL
Sbjct: 210 SDVWSFGVTLHELLT 224
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
EI I + L++ ++V F +D Y+V E + L E
Sbjct: 92 EIAIHKSLDNPHVVGFH----------GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTE 141
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLA-RLYNAEDRQRP 313
MRQ + G+ Y H +HRD+K N+ +N+ +VK+ DFGLA ++ +R++
Sbjct: 142 PEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKX 201
Query: 314 YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
T Y PE+L ++ + +D+WS GCIL L V KP F
Sbjct: 202 LCG---TPNYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 154 LAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREI 213
L G S + T +LVA+K + E EG + EI +L ++ H NIV L +I
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEA-LEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 214 VTDKSDALDFRKDKGSFYLVFEYMDHDLM--GLLESGMVDFNEVNNASIMRQLLDGLSYC 271
+ G YL+ + + + ++E G + E + + ++ Q+LD + Y
Sbjct: 85 Y----------ESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYL 132
Query: 272 HKRNFLHRDIKCSNIL---MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
H +HRD+K N+L ++ ++ ++DFGL+++ ED + T Y PE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPE- 188
Query: 329 LLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+L ++ Y A+D WS G I L P F
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 16/113 (14%)
Query: 2 FSGGRGNSGWANIELLQLEVISKL--CGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREE 59
S G G+ E+L + SK C + + + P ++ K+ + L+ E
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
Query: 60 FSLMPP-------GALDLLDKMLELDPERRITAEQALKSVWL-------KNVH 98
+ P A D + ++E DPE+R T EQAL+ W+ KN+H
Sbjct: 235 YEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIH 287
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
RE ++ +L+H V L F+ D+ ++ + + +L+ + +
Sbjct: 79 VTRERDVMSRLDHPFFVKLY---------FTFQDDEKLYFGLSYAKNGELLKYIRK-IGS 128
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
V T Y PELL E+ + D+W+ GCI+ +L P F
Sbjct: 189 ARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
RE ++ +L+H V L F+ D+ ++ + + +L+ + +
Sbjct: 79 VTRERDVMSRLDHPFFVKLY---------FTFQDDEKLYFGLSYAKNGELLKYIRK-IGS 128
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
V T Y PELL E+ + D+W+ GCI+ +L P F
Sbjct: 189 ARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDF 252
RE ++ +L+H V L F+ D+ ++ + + +L+ + + F
Sbjct: 78 TRERDVMSRLDHPFFVKLY---------FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSF 127
Query: 253 NEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQR 312
+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 128 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 187
Query: 313 PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
V T Y PELL E+ + D+W+ GCI+ +L P F
Sbjct: 188 RANAFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
RE ++ +L+H V L F+ D+ ++ + + +L+ + +
Sbjct: 77 VTRERDVMSRLDHPFFVKLY---------FTFQDDEKLYFGLSYAKNGELLKYIRK-IGS 126
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 127 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 186
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
V T Y PELL E+ + D+W+ GCI+ +L P F
Sbjct: 187 ARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD-LMGLLESGMVD 251
+ E K++ L+H+ +V L + T + +++ EYM + L+ L
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTKQR----------PIFIITEYMANGCLLNYLREMRHR 116
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F + + + + + Y + FLHRD+ N L+N++G VK++DFGL+R Y +D
Sbjct: 117 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEY 175
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+ + PPE+L+ ++ D+W+ G ++ E++
Sbjct: 176 TSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIY 215
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
+E + +GG + + +K+V+ NEK A RE+K L +L+H NIV+
Sbjct: 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEK------AEREVKALAKLDHVNIVHY 69
Query: 211 R------EIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD-----FNEVNNAS 259
+ + S R ++ E+ D G LE + ++V
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDK---GTLEQWIEKRRGEKLDKVLALE 126
Query: 260 IMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGL-ARLYNAEDRQRPYTNKV 318
+ Q+ G+ Y H + ++RD+K SNI + + +VK+ DFGL L N R R
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKG--- 183
Query: 319 ITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
TL Y PE + ++ YG +D+++ G IL EL
Sbjct: 184 -TLRYMSPEQISSQD-YGKEVDLYALGLILAELL 215
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 58 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIIIEFMTYGNLLDYLRECNRQ 107
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ N V + Q+ + Y K+NF+HRD+ N L+ VK+ADFGL+RL +
Sbjct: 108 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX 167
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K W P L ++ DVW+ G +L E+
Sbjct: 168 TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 206
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 154 LAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREI 213
L G S + T +LVA+K + E EG + EI +L ++ H NIV L +I
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEA-LEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 214 VTDKSDALDFRKDKGSFYLVFEYMDHDLM--GLLESGMVDFNEVNNASIMRQLLDGLSYC 271
+ G YL+ + + + ++E G + E + + ++ Q+LD + Y
Sbjct: 85 Y----------ESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYL 132
Query: 272 HKRNFLHRDIKCSNIL---MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
H +HRD+K N+L ++ ++ ++DFGL+++ ED + T Y PE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPE- 188
Query: 329 LLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+L ++ Y A+D WS G I L P F
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 16/113 (14%)
Query: 2 FSGGRGNSGWANIELLQLEVISKL--CGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREE 59
S G G+ E+L + SK C + + + P ++ K+ + L+ E
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
Query: 60 FSLMPP-------GALDLLDKMLELDPERRITAEQALKSVWL-------KNVH 98
+ P A D + ++E DPE+R T EQAL+ W+ KN+H
Sbjct: 235 YEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIH 287
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
EI I + L++ ++V F +D Y+V E + L E
Sbjct: 76 EIAIHKSLDNPHVVGFH----------GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTE 125
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY 314
MRQ + G+ Y H +HRD+K N+ +N+ +VK+ DFGLA + ++
Sbjct: 126 PEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-- 183
Query: 315 TNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ T Y PE+L ++ + +D+WS GCIL L V KP F
Sbjct: 184 KDLCGTPNYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
RE ++ +L+H V L F+ D+ ++ + + +L+ + +
Sbjct: 57 VTRERDVMSRLDHPFFVKL---------YFTFQDDEKLYFGLSYAKNGELLKYIRK-IGS 106
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 107 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 166
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
V T Y PELL E+ + D+W+ GCI+ +L P F
Sbjct: 167 ARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 154 LAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREI 213
L G S + T +LVA+K + + EG + EI +L ++ H NIV L +I
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIA-KKALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 214 VTDKSDALDFRKDKGSFYLVFEYMDHDLM--GLLESGMVDFNEVNNASIMRQLLDGLSYC 271
+ G YL+ + + + ++E G + E + + ++ Q+LD + Y
Sbjct: 85 Y----------ESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYL 132
Query: 272 HKRNFLHRDIKCSNIL---MNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPEL 328
H +HRD+K N+L ++ ++ ++DFGL+++ ED + T Y PE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPE- 188
Query: 329 LLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+L ++ Y A+D WS G I L P F
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 16/113 (14%)
Query: 2 FSGGRGNSGWANIELLQLEVISKL--CGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREE 59
S G G+ E+L + SK C + + + P ++ K+ + L+ E
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
Query: 60 FSLMPP-------GALDLLDKMLELDPERRITAEQALKSVWL-------KNVH 98
+ P A D + ++E DPE+R T EQAL+ W+ KN+H
Sbjct: 235 YEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIH 287
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 87/195 (44%), Gaps = 30/195 (15%)
Query: 170 TDELVALKKVRLENEKEGFPITAVR-EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E VA+K L+ E G I ++ EI+ILR L H+NIV + I T+ D G
Sbjct: 37 TGEQVAVKS--LKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---------DGG 85
Query: 229 S-FYLVFEYM-DHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
+ L+ E++ L L N Q+ G+ Y R ++HRD+ N+
Sbjct: 86 NGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNV 145
Query: 287 LMNNRGEVKLADFGLARLYNA--------EDRQRPYTNKVITLWYRPPELLLGEERYGPA 338
L+ + +VK+ DFGL + +DR P WY P L+ + ++ A
Sbjct: 146 LVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP------VFWYAPECLM--QSKFYIA 197
Query: 339 IDVWSCGCILGELFV 353
DVWS G L EL
Sbjct: 198 SDVWSFGVTLHELLT 212
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 19/181 (10%)
Query: 174 VALKKVRLEN-EKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYL 232
VA+K ++ + E E F ++E +++++ H N+V L + T + FY+
Sbjct: 46 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYI 91
Query: 233 VFEYMDHD--LMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
+ E+M + L L E + N V + Q+ + Y K+NF+HRD+ N L+
Sbjct: 92 IIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 151
Query: 291 RGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGE 350
VK+ADFGL+RL + K W P L ++ DVW+ G +L E
Sbjct: 152 NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWE 209
Query: 351 L 351
+
Sbjct: 210 I 210
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 174 VALKKVRLENEKEGFP-ITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYL 232
VALKKV++ + + ++EI +L+QLNH N++ + ++ +
Sbjct: 60 VALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNE----------LNI 109
Query: 233 VFEYMDH-DLMGLLESGMVDFNEVNNASIMR---QLLDGLSYCHKRNFLHRDIKCSNILM 288
V E D DL +++ + ++ + QL L + H R +HRDIK +N+ +
Sbjct: 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI 169
Query: 289 NNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
G VKL D GL R +++ + + V T +Y PE + E Y D+WS GC+L
Sbjct: 170 TATGVVKLGDLGLGRFFSS--KTTAAHSLVGTPYYMSPE-RIHENGYNFKSDIWSLGCLL 226
Query: 349 GEL 351
E+
Sbjct: 227 YEM 229
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
RE ++ +L+H V L F+ D+ ++ + + +L+ + +
Sbjct: 56 VTRERDVMSRLDHPFFVKL---------YFTFQDDEKLYFGLSYAKNGELLKYIRK-IGS 105
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 106 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 165
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
V T Y PELL E+ + D+W+ GCI+ +L P F
Sbjct: 166 ARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 30/197 (15%)
Query: 170 TDELVALKK-VRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKG 228
T E++ +K+ +R + E + T ++E+K++R L H N++ ++ K L+F
Sbjct: 34 TGEVMVMKELIRFDEETQR---TFLKEVKVMRCLEHPNVLKFIGVLY-KDKRLNF----- 84
Query: 229 SFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
+ EY+ L G+++S + S + + G++Y H N +HRD+ N L
Sbjct: 85 ----ITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCL 140
Query: 288 MNNRGEVKLADFGLARLYNAE-------------DRQRPYTNKVITLWYRPPELLLGEER 334
+ V +ADFGLARL E DR++ YT V ++ PE++ G
Sbjct: 141 VRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT-VVGNPYWMAPEMINGRS- 198
Query: 335 YGPAIDVWSCGCILGEL 351
Y +DV+S G +L E+
Sbjct: 199 YDEKVDVFSFGIVLCEI 215
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
RE ++ +L+H V L F+ D+ ++ + + +L+ + +
Sbjct: 76 VTRERDVMSRLDHPFFVKLY---------FTFQDDEKLYFGLSYAKNGELLKYIRK-IGS 125
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 126 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 185
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ V T Y PE LL E+ + D+W+ GCI+ +L P F
Sbjct: 186 ARANSFVGTAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 38/198 (19%)
Query: 170 TDELVALKKVRLE---NEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKD 226
T E+VA+K ++ + + G+ +EI ILR L H++I+ + D+ +
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWK----QEIDILRTLYHEHIIKYKGCCEDQGEK------ 91
Query: 227 KGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIM---RQLLDGLSYCHKRNFLHRDIKC 283
S LV EY+ +G L + + + A ++ +Q+ +G++Y H ++++HR++
Sbjct: 92 --SLQLVMEYVP---LGSLRD-YLPRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAA 145
Query: 284 SNILMNNRGEVKLADFGLAR-------LYNA-EDRQRPYTNKVITLWYRPPELLLGEERY 335
N+L++N VK+ DFGLA+ Y ED P WY P L E ++
Sbjct: 146 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP------VFWYAPE--CLKEYKF 197
Query: 336 GPAIDVWSCGCILGELFV 353
A DVWS G L EL
Sbjct: 198 YYASDVWSFGVTLYELLT 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 11/212 (5%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKE-GFPITAVREIKILRQLNHKNIV 208
L E L GG+S + + L VA+K +R + ++ F + RE + LNH IV
Sbjct: 16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 209 NLREIVTDKSDALDFRKDKGSF-YLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDG 267
V D +A G Y+V EY+D + + ++
Sbjct: 76 ----AVYDTGEA---ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 268 LSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPP 326
L++ H+ +HRD+K +NI+++ VK+ DFG+AR T VI T Y P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 327 ELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
E G+ + DV+S GC+L E+ +P F
Sbjct: 189 EQARGDSVDARS-DVYSLGCVLYEVLTGEPPF 219
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD-LMGLLESGMVD 251
+ E K++ L+H+ +V L + T + +++ EYM + L+ L
Sbjct: 51 IEEAKVMMNLSHEKLVQLYGVCTKQR----------PIFIITEYMANGCLLNYLREMRHR 100
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F + + + + + Y + FLHRD+ N L+N++G VK++DFGL+R Y +D
Sbjct: 101 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEY 159
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+ + PPE+L+ ++ D+W+ G ++ E++
Sbjct: 160 TSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIY 199
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 38/198 (19%)
Query: 170 TDELVALKKVRLE---NEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKD 226
T E+VA+K ++ + + G+ +EI ILR L H++I+ + D+ +
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWK----QEIDILRTLYHEHIIKYKGCCEDQGEK------ 91
Query: 227 KGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIM---RQLLDGLSYCHKRNFLHRDIKC 283
S LV EY+ +G L + + + A ++ +Q+ +G++Y H ++++HR++
Sbjct: 92 --SLQLVMEYVP---LGSLRD-YLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAA 145
Query: 284 SNILMNNRGEVKLADFGLAR-------LYNA-EDRQRPYTNKVITLWYRPPELLLGEERY 335
N+L++N VK+ DFGLA+ Y ED P WY P L E ++
Sbjct: 146 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP------VFWYAPE--CLKEYKF 197
Query: 336 GPAIDVWSCGCILGELFV 353
A DVWS G L EL
Sbjct: 198 YYASDVWSFGVTLYELLT 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 11/212 (5%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKE-GFPITAVREIKILRQLNHKNIV 208
L E L GG+S + + L VA+K +R + ++ F + RE + LNH IV
Sbjct: 16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 209 NLREIVTDKSDALDFRKDKGSF-YLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDG 267
V D +A G Y+V EY+D + + ++
Sbjct: 76 ----AVYDTGEA---ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 268 LSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPP 326
L++ H+ +HRD+K +NI+++ VK+ DFG+AR T VI T Y P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 327 ELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
E G+ + DV+S GC+L E+ +P F
Sbjct: 189 EQARGDSVDARS-DVYSLGCVLYEVLTGEPPF 219
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
RE ++ +L+H V L F+ D+ ++ + + +L+ + +
Sbjct: 54 VTRERDVMSRLDHPFFVKL---------YFTFQDDEKLYFGLSYAKNGELLKYIRK-IGS 103
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 104 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 163
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
V T Y PELL E+ + D+W+ GCI+ +L P F
Sbjct: 164 ARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 11/212 (5%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKE-GFPITAVREIKILRQLNHKNIV 208
L E L GG+S + + L VA+K +R + ++ F + RE + LNH IV
Sbjct: 16 LGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 209 NLREIVTDKSDALDFRKDKGSF-YLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDG 267
V D +A G Y+V EY+D + + ++
Sbjct: 76 ----AVYDTGEA---ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 268 LSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPP 326
L++ H+ +HRD+K +NI+++ VK+ DFG+AR T VI T Y P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 327 ELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
E G+ + DV+S GC+L E+ +P F
Sbjct: 189 EQARGDSVDARS-DVYSLGCVLYEVLTGEPPF 219
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD-LMGLLESGMVD 251
+ E K++ L+H+ +V L + T + +++ EYM + L+ L
Sbjct: 58 IEEAKVMMNLSHEKLVQLYGVCTKQR----------PIFIITEYMANGCLLNYLREMRHR 107
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F + + + + + Y + FLHRD+ N L+N++G VK++DFGL+R Y +D
Sbjct: 108 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEY 166
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+ + PPE+L+ ++ D+W+ G ++ E++
Sbjct: 167 TSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIY 206
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD-LMGLLESGMVD 251
+ E K++ L+H+ +V L + T + +++ EYM + L+ L
Sbjct: 47 IEEAKVMMNLSHEKLVQLYGVCTKQR----------PIFIITEYMANGCLLNYLREMRHR 96
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F + + + + + Y + FLHRD+ N L+N++G VK++DFGL+R Y +D
Sbjct: 97 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEY 155
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+ + PPE+L+ ++ D+W+ G ++ E++
Sbjct: 156 TSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIY 195
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
RE ++ +L+H V L F+ D+ ++ + + +L+ + +
Sbjct: 55 VTRERDVMSRLDHPFFVKL---------YFTFQDDEKLYFGLSYAKNGELLKYIRK-IGS 104
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 105 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 164
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
V T Y PELL E+ + D+W+ GCI+ +L P F
Sbjct: 165 ARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 19/181 (10%)
Query: 174 VALKKVRLEN-EKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYL 232
VA+K ++ + E E F ++E +++++ H N+V L + T + FY+
Sbjct: 46 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYI 91
Query: 233 VFEYMDHD--LMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
+ E+M + L L E + N V + Q+ + Y K+NF+HRD+ N L+
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 151
Query: 291 RGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGE 350
VK+ADFGL+RL + K W P L ++ DVW+ G +L E
Sbjct: 152 NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWE 209
Query: 351 L 351
+
Sbjct: 210 I 210
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 19/181 (10%)
Query: 174 VALKKVRLEN-EKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYL 232
VA+K ++ + E E F ++E +++++ H N+V L + T + FY+
Sbjct: 46 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYI 91
Query: 233 VFEYMDHD--LMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
+ E+M + L L E + N V + Q+ + Y K+NF+HRD+ N L+
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 151
Query: 291 RGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGE 350
VK+ADFGL+RL + K W P L ++ DVW+ G +L E
Sbjct: 152 NHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWE 209
Query: 351 L 351
+
Sbjct: 210 I 210
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
RE ++ +L+H V L F+ D+ ++ + + +L+ + +
Sbjct: 84 VTRERDVMSRLDHPFFVKLY---------FCFQDDEKLYFGLSYAKNGELLKYIRK-IGS 133
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 134 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 193
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
V T Y PELL E+ + D+W+ GCI+ +L P F
Sbjct: 194 ARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIITEFMTYGNLLDYLRECNRQ 111
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ N V + Q+ + Y K+NF+HRD+ N L+ VK+ADFGL+RL +
Sbjct: 112 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 171
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K W P L ++ DVW+ G +L E+
Sbjct: 172 TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 210
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD-LMGLLESGMVD 251
+ E K++ L+H+ +V L + T + +++ EYM + L+ L
Sbjct: 52 IEEAKVMMNLSHEKLVQLYGVCTKQR----------PIFIITEYMANGCLLNYLREMRHR 101
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F + + + + + Y + FLHRD+ N L+N++G VK++DFGL+R Y +D
Sbjct: 102 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEY 160
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+ + PPE+L+ ++ D+W+ G ++ E++
Sbjct: 161 TSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIY 200
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 34/205 (16%)
Query: 173 LVALKKVR--LENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
LVA+K ++ E+ ++ F RE ++L L H++IV + T+ L
Sbjct: 73 LVAVKALKEASESARQDFQ----REAELLTMLQHQHIVRFFGVCTEGRPLL--------- 119
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNA--------------SIMRQLLDGLSYCHKRN 275
+VFEYM H DL L S D + ++ Q+ G+ Y +
Sbjct: 120 -MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH 178
Query: 276 FLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERY 335
F+HRD+ N L+ VK+ DFG++R + D R ++ + + PPE +L ++
Sbjct: 179 FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL-YRKF 237
Query: 336 GPAIDVWSCGCILGELFV--KKPLF 358
DVWS G +L E+F K+P +
Sbjct: 238 TTESDVWSFGVVLWEIFTYGKQPWY 262
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 172 ELVALKKVRLENEKEGFPITAVR-EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
++++ +K + + +E P V EI+IL++LNH I+ ++ D +
Sbjct: 47 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-----------DAEDY 95
Query: 231 YLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
Y+V E M+ + G E Q+L + Y H+ +HRD+K N+L+++
Sbjct: 96 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 155
Query: 291 RGE---VKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELL--LGEERYGPAIDVWSCG 345
+ E +K+ DFG +++ R T Y PE+L +G Y A+D WS G
Sbjct: 156 QEEDCLIKITDFGHSKILGETSLMRTLCG---TPTYLAPEVLVSVGTAGYNRAVDCWSLG 212
Query: 346 CIL 348
IL
Sbjct: 213 VIL 215
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKN 96
ALDL+ K+L +DP+ R T E+AL+ WL++
Sbjct: 257 ALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
RE ++ +L+H V L F+ D+ ++ + + +L+ + +
Sbjct: 61 VTRERDVMSRLDHPFFVKLY---------FTFQDDEKLYFGLSYAKNGELLKYIRK-IGS 110
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 111 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 170
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
V T Y PE LL E+ + D+W+ GCI+ +L P F
Sbjct: 171 ARANXFVGTAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 24/186 (12%)
Query: 174 VALKKVRL---ENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
VA+K +++ E ++ F + E I+ Q +H NI+ L +VT +
Sbjct: 47 VAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPNIIRLEGVVTKSKPVM--------- 93
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
+V E M++ L L F + ++R + G+ Y ++HRD+ NIL+N
Sbjct: 94 -IVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 152
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTN---KVITLWYRPPELLLGEERYGPAIDVWSCGC 346
+ K++DFGL+R+ +D + YT K+ W P + ++ A DVWS G
Sbjct: 153 SNLVCKVSDFGLSRVLE-DDPEAAYTTRGGKIPIRWTSPEA--IAYRKFTSASDVWSYGI 209
Query: 347 ILGELF 352
+L E+
Sbjct: 210 VLWEVM 215
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIITEFMTYGNLLDYLRECNRQ 110
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ N V + Q+ + Y K+NF+HRD+ N L+ VK+ADFGL+RL +
Sbjct: 111 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 170
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K W P L ++ DVW+ G +L E+
Sbjct: 171 TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 209
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIITEFMTYGNLLDYLRECNRQ 108
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ N V + Q+ + Y K+NF+HRD+ N L+ VK+ADFGL+RL +
Sbjct: 109 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 168
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K W P L ++ DVW+ G +L E+
Sbjct: 169 TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 207
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 11/212 (5%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKE-GFPITAVREIKILRQLNHKNIV 208
L E L GG+S + + L VA+K +R + ++ F + RE + LNH IV
Sbjct: 33 LGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 92
Query: 209 NLREIVTDKSDALDFRKDKGSF-YLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDG 267
V D +A G Y+V EY+D + + ++
Sbjct: 93 ----AVYDTGEA---ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 145
Query: 268 LSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPP 326
L++ H+ +HRD+K +NI+++ VK+ DFG+AR T VI T Y P
Sbjct: 146 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 205
Query: 327 ELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
E G+ + DV+S GC+L E+ +P F
Sbjct: 206 EQARGDSVDARS-DVYSLGCVLYEVLTGEPPF 236
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIITEFMTYGNLLDYLRECNRQ 108
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ N V + Q+ + Y K+NF+HRD+ N L+ VK+ADFGL+RL +
Sbjct: 109 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 168
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K W P L ++ DVW+ G +L E+
Sbjct: 169 TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 207
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 32/203 (15%)
Query: 173 LVALKKVR--LENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
LVA+K ++ +N ++ F RE ++L L H++IV + + +
Sbjct: 45 LVAVKTLKDASDNARKDFH----REAELLTNLQHEHIVKFYGVCVEGDPLI--------- 91
Query: 231 YLVFEYMDH-DLMGLLESGMVD------------FNEVNNASIMRQLLDGLSYCHKRNFL 277
+VFEYM H DL L + D + I +Q+ G+ Y ++F+
Sbjct: 92 -MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFV 150
Query: 278 HRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGP 337
HRD+ N L+ VK+ DFG++R + D R + ++ + + PPE ++ ++
Sbjct: 151 HRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM-YRKFTT 209
Query: 338 AIDVWSCGCILGELFV--KKPLF 358
DVWS G +L E+F K+P +
Sbjct: 210 ESDVWSLGVVLWEIFTYGKQPWY 232
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 172 ELVALKKVRLENEKEGFPITAVR-EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
++++ +K + + +E P V EI+IL++LNH I+ ++ D +
Sbjct: 41 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-----------DAEDY 89
Query: 231 YLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
Y+V E M+ + G E Q+L + Y H+ +HRD+K N+L+++
Sbjct: 90 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 149
Query: 291 RGE---VKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELL--LGEERYGPAIDVWSCG 345
+ E +K+ DFG +++ R T Y PE+L +G Y A+D WS G
Sbjct: 150 QEEDCLIKITDFGHSKILGETSLMRTLCG---TPTYLAPEVLVSVGTAGYNRAVDCWSLG 206
Query: 346 CIL 348
IL
Sbjct: 207 VIL 209
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKN 96
ALDL+ K+L +DP+ R T E+AL+ WL++
Sbjct: 251 ALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIITEFMTYGNLLDYLRECNRQ 106
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ N V + Q+ + Y K+NF+HRD+ N L+ VK+ADFGL+RL +
Sbjct: 107 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K W P L ++ DVW+ G +L E+
Sbjct: 167 TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 205
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 172 ELVALKKVRLENEKEGFPITAVR-EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
++++ +K + + +E P V EI+IL++LNH I+ ++ D +
Sbjct: 41 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-----------DAEDY 89
Query: 231 YLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
Y+V E M+ + G E Q+L + Y H+ +HRD+K N+L+++
Sbjct: 90 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 149
Query: 291 RGE---VKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELL--LGEERYGPAIDVWSCG 345
+ E +K+ DFG +++ R T Y PE+L +G Y A+D WS G
Sbjct: 150 QEEDCLIKITDFGHSKILGETSLMRTLCG---TPTYLAPEVLVSVGTAGYNRAVDCWSLG 206
Query: 346 CIL 348
IL
Sbjct: 207 VIL 209
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKN 96
ALDL+ K+L +DP+ R T E+AL+ WL++
Sbjct: 251 ALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD-LMGLLESGMVD 251
+ E K++ L+H+ +V L + T + +++ EYM + L+ L
Sbjct: 52 IEEAKVMMNLSHEKLVQLYGVCTKQR----------PIFIITEYMANGCLLNYLREMRHR 101
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F + + + + + Y + FLHRD+ N L+N++G VK++DFGL+R Y +D
Sbjct: 102 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEY 160
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+ + PPE+L+ ++ D+W+ G ++ E++
Sbjct: 161 TSSRGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIY 200
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 24/186 (12%)
Query: 174 VALKKVRL---ENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
VA+K +++ E ++ F + E I+ Q +H NI+ L +VT +
Sbjct: 76 VAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPNIIRLEGVVTKSKPVM--------- 122
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
+V E M++ L L F + ++R + G+ Y ++HRD+ NIL+N
Sbjct: 123 -IVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 181
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTN---KVITLWYRPPELLLGEERYGPAIDVWSCGC 346
+ K++DFGL+R+ +D + YT K+ W P + ++ A DVWS G
Sbjct: 182 SNLVCKVSDFGLSRVLE-DDPEAAYTTRGGKIPIRWTSPEA--IAYRKFTSASDVWSYGI 238
Query: 347 ILGELF 352
+L E+
Sbjct: 239 VLWEVM 244
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
RE ++ +L+H V L F+ D+ ++ + + +L+ + +
Sbjct: 76 VTRERDVMSRLDHPFFVKLY---------FTFQDDEKLYFGLSYAKNGELLKYIRK-IGS 125
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E +++ L Y H + +HRD+K NIL+N +++ DFG A++ + E +Q
Sbjct: 126 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 185
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
V T Y PE LL E+ + D+W+ GCI+ +L P F
Sbjct: 186 ARANXFVGTAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIITEFMTYGNLLDYLRECNRQ 106
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ N V + Q+ + Y K+NF+HRD+ N L+ VK+ADFGL+RL +
Sbjct: 107 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K W P L ++ DVW+ G +L E+
Sbjct: 167 TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 205
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 35/188 (18%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+K ++ + + F + E ++ QL H N+V L ++ + +KG Y+V
Sbjct: 47 VAVKCIKNDATAQAF----LAEASVMTQLRHSNLVQLLGVIVE---------EKGGLYIV 93
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMR---------QLLDGLSYCHKRNFLHRDIKCS 284
EYM + +VD+ S++ + + + Y NF+HRD+
Sbjct: 94 TEYM-------AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAAR 146
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
N+L++ K++DFGL + E T K+ W P L E+++ DVWS
Sbjct: 147 NVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALR--EKKFSTKSDVWSF 200
Query: 345 GCILGELF 352
G +L E++
Sbjct: 201 GILLWEIY 208
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 175 ALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALD---FRKDKGSFY 231
A+KK+R EK T + E+ +L LNH+ +V ++ + + K K + +
Sbjct: 35 AIKKIRHTEEKLS---TILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLF 91
Query: 232 LVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
+ EY ++ L L+ S ++ + RQ+L+ LSY H + +HR++K NI ++
Sbjct: 92 IQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDE 151
Query: 291 RGEVKLADFGLAR-------LYNAEDRQRP-----YTNKVITLWYRPPELLLGEERYGPA 338
VK+ DFGLA+ + + + P T+ + T Y E+L G Y
Sbjct: 152 SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEK 211
Query: 339 IDVWSCGCILGE 350
ID +S G I E
Sbjct: 212 IDXYSLGIIFFE 223
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 84/191 (43%), Gaps = 39/191 (20%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKS---------------DALDFRKDKGSFYLVF----- 234
E++++++L+H NI L E+ D+ D L+ D +
Sbjct: 78 EVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKT 137
Query: 235 ----------EYMDHDLMGLLESGMVDFNEVNN--ASIMRQLLDGLSYCHKRNFLHRDIK 282
E ++ + G ES +DF + ++IMRQ+ L Y H + HRDIK
Sbjct: 138 QICPCPECNEEAINGSIHGFRES--LDFVQREKLISNIMRQIFSALHYLHNQGICHRDIK 195
Query: 283 CSNILM--NNRGEVKLADFGLARLYNAEDRQRPY--TNKVITLWYRPPELL-LGEERYGP 337
N L N E+KL DFGL++ + + Y T K T ++ PE+L E YGP
Sbjct: 196 PENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255
Query: 338 AIDVWSCGCIL 348
D WS G +L
Sbjct: 256 KCDAWSAGVLL 266
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 172 ELVALKKVRLENEKEGFPITAVR-EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
++++ +K + + +E P V EI+IL++LNH I+ ++ D +
Sbjct: 41 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-----------DAEDY 89
Query: 231 YLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
Y+V E M+ + G E Q+L + Y H+ +HRD+K N+L+++
Sbjct: 90 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 149
Query: 291 RGE---VKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELL--LGEERYGPAIDVWSCG 345
+ E +K+ DFG +++ R T Y PE+L +G Y A+D WS G
Sbjct: 150 QEEDCLIKITDFGHSKILGETSLMRTLCG---TPTYLAPEVLVSVGTAGYNRAVDCWSLG 206
Query: 346 CIL 348
IL
Sbjct: 207 VIL 209
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKN 96
ALDL+ K+L +DP+ R T E+AL+ WL++
Sbjct: 251 ALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 35/188 (18%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+K ++ + + F + E ++ QL H N+V L ++ + +KG Y+V
Sbjct: 32 VAVKCIKNDATAQAF----LAEASVMTQLRHSNLVQLLGVIVE---------EKGGLYIV 78
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMR---------QLLDGLSYCHKRNFLHRDIKCS 284
EYM + +VD+ S++ + + + Y NF+HRD+
Sbjct: 79 TEYM-------AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAAR 131
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
N+L++ K++DFGL + E T K+ W P L E+++ DVWS
Sbjct: 132 NVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALR--EKKFSTKSDVWSF 185
Query: 345 GCILGELF 352
G +L E++
Sbjct: 186 GILLWEIY 193
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 35/188 (18%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+K ++ + + F + E ++ QL H N+V L ++ + +KG Y+V
Sbjct: 219 VAVKCIKNDATAQAF----LAEASVMTQLRHSNLVQLLGVIVE---------EKGGLYIV 265
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMR---------QLLDGLSYCHKRNFLHRDIKCS 284
EYM + +VD+ S++ + + + Y NF+HRD+
Sbjct: 266 TEYM-------AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAAR 318
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
N+L++ K++DFGL + E T K+ W P L E+++ DVWS
Sbjct: 319 NVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALR--EKKFSTKSDVWSF 372
Query: 345 GCILGELF 352
G +L E++
Sbjct: 373 GILLWEIY 380
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 34/205 (16%)
Query: 173 LVALKKVR--LENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
LVA+K ++ E+ ++ F RE ++L L H++IV + T+ L
Sbjct: 50 LVAVKALKEASESARQDFQ----REAELLTMLQHQHIVRFFGVCTEGRPLL--------- 96
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNA--------------SIMRQLLDGLSYCHKRN 275
+VFEYM H DL L S D + ++ Q+ G+ Y +
Sbjct: 97 -MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH 155
Query: 276 FLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERY 335
F+HRD+ N L+ VK+ DFG++R + D R ++ + + PPE +L ++
Sbjct: 156 FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL-YRKF 214
Query: 336 GPAIDVWSCGCILGELFV--KKPLF 358
DVWS G +L E+F K+P +
Sbjct: 215 TTESDVWSFGVVLWEIFTYGKQPWY 239
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 70 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIITEFMTYGNLLDYLRECNRQ 119
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ N V + Q+ + Y K+NF+HRD+ N L+ VK+ADFGL+RL +
Sbjct: 120 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 179
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K W P L ++ DVW+ G +L E+
Sbjct: 180 TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 218
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 31/167 (18%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESG----- 248
E +++ L H +V L +VT K Y++ E+M L+ L+S
Sbjct: 60 EANVMKTLQHDKLVKLHAVVT-----------KEPIYIITEFMAKGSLLDFLKSDEGSKQ 108
Query: 249 ----MVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARL 304
++DF+ Q+ +G+++ +RN++HRD++ +NIL++ K+ADFGLAR+
Sbjct: 109 PLPKLIDFSA--------QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV 160
Query: 305 YNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
+ K W P + G + DVWS G +L E+
Sbjct: 161 IEDNEYTAREGAKFPIKWTAPEAINFGS--FTIKSDVWSFGILLMEI 205
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 172 ELVALKKVRLENEKEGFPITAVR-EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
++++ +K + + +E P V EI+IL++LNH I+ ++ D +
Sbjct: 40 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-----------DAEDY 88
Query: 231 YLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
Y+V E M+ + G E Q+L + Y H+ +HRD+K N+L+++
Sbjct: 89 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 148
Query: 291 RGE---VKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELL--LGEERYGPAIDVWSCG 345
+ E +K+ DFG +++ R T Y PE+L +G Y A+D WS G
Sbjct: 149 QEEDCLIKITDFGHSKILGETSLMRTLCG---TPTYLAPEVLVSVGTAGYNRAVDCWSLG 205
Query: 346 CIL 348
IL
Sbjct: 206 VIL 208
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKN 96
ALDL+ K+L +DP+ R T E+AL+ WL++
Sbjct: 250 ALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 34/205 (16%)
Query: 173 LVALKKVR--LENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
LVA+K ++ E+ ++ F RE ++L L H++IV + T+ L
Sbjct: 44 LVAVKALKEASESARQDFQ----REAELLTMLQHQHIVRFFGVCTEGRPLL--------- 90
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNA--------------SIMRQLLDGLSYCHKRN 275
+VFEYM H DL L S D + ++ Q+ G+ Y +
Sbjct: 91 -MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH 149
Query: 276 FLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERY 335
F+HRD+ N L+ VK+ DFG++R + D R ++ + + PPE +L ++
Sbjct: 150 FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL-YRKF 208
Query: 336 GPAIDVWSCGCILGELFV--KKPLF 358
DVWS G +L E+F K+P +
Sbjct: 209 TTESDVWSFGVVLWEIFTYGKQPWY 233
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 33/185 (17%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH------------DL 241
RE ++L L H++IV + D + +VFEYM H D
Sbjct: 66 REAELLTNLQHEHIVKFYGVCGDGDPLI----------MVFEYMKHGDLNKFLRAHGPDA 115
Query: 242 MGLLES------GMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
M L++ G + +++ + I Q+ G+ Y ++F+HRD+ N L+ VK
Sbjct: 116 MILVDGQPRQAKGELGLSQMLH--IASQIASGMVYLASQHFVHRDLATRNCLVGANLLVK 173
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV-- 353
+ DFG++R + D R + ++ + + PPE ++ ++ DVWS G IL E+F
Sbjct: 174 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSFGVILWEIFTYG 232
Query: 354 KKPLF 358
K+P F
Sbjct: 233 KQPWF 237
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 27/181 (14%)
Query: 176 LKKVRLENEKEGFPITAV-REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
+KK RL + + G + RE+ ILR++ H NI+ L +I +K+D + L+
Sbjct: 45 IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV----------LIL 94
Query: 235 EYMD----HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
E + D + ES E ++Q+LDG+ Y H + H D+K NI++ +
Sbjct: 95 ELVSGGELFDFLAEKES----LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLD 150
Query: 291 RG----EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
+ +KL DFG+A A + + N T + PE ++ E G D+WS G
Sbjct: 151 KNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGV 206
Query: 347 I 347
I
Sbjct: 207 I 207
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLK 95
E FS A D + ++L DP+RR+ Q+L+ W+K
Sbjct: 240 EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 9/211 (4%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKE-GFPITAVREIKILRQLNHKNIV 208
L E L GG+S + + L VA+K +R + ++ F + RE + LNH IV
Sbjct: 16 LGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 209 NLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGL 268
+ ++ A Y+V EY+D + + ++ L
Sbjct: 76 AVYATGEAETPAGPLP------YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 269 SYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPE 327
++ H+ +HRD+K +NI+++ VK+ DFG+AR T VI T Y PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 328 LLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
G+ + DV+S GC+L E+ +P F
Sbjct: 190 QARGDSVDARS-DVYSLGCVLYEVLTGEPPF 219
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIIIEFMTYGNLLDYLRECNRQ 104
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ + V + Q+ + Y K+NF+HRD+ N L+ VK+ADFGL+RL +
Sbjct: 105 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX 164
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K W P L ++ DVW+ G +L E+
Sbjct: 165 TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 203
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 21/158 (13%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLM--GLLESGMVDF 252
EI +L +L+H NI+ L+EI ++ LV E + + ++E G +
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTE----------ISLVLELVTGGELFDRIVEKGY--Y 145
Query: 253 NEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN---RGEVKLADFGLARLYNAED 309
+E + A ++Q+L+ ++Y H+ +HRD+K N+L +K+ADFGL+++ +
Sbjct: 146 SERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205
Query: 310 RQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
+ T Y PE+L G YGP +D+WS G I
Sbjct: 206 LMKTVCG---TPGYCAPEILRGCA-YGPEVDMWSVGII 239
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 41 PLWHTIKPKKIHRRRLREEFSLMPP-------GALDLLDKMLELDPERRITAEQALKSVW 93
P + + + RR L E+ + P A DL+ K++ LDP++R+T QAL+ W
Sbjct: 249 PFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308
Query: 94 L 94
+
Sbjct: 309 V 309
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 28/193 (14%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+K ++ E REI+ILR L H++IV + D+ + S
Sbjct: 37 TGEMVAVKALK-EGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEK--------S 87
Query: 230 FYLVFEYMD-HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
LV EY+ L L V ++ +Q+ +G++Y H ++++HR + N+L+
Sbjct: 88 VQLVMEYVPLGSLRDYLPRHCVGLAQL--LLFAQQICEGMAYLHAQHYIHRALAARNVLL 145
Query: 289 NNRGEVKLADFGLAR-------LYNA-EDRQRPYTNKVITLWYRPPELLLGEERYGPAID 340
+N VK+ DFGLA+ Y ED P WY P L E ++ A D
Sbjct: 146 DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP------VFWYAPE--CLKECKFYYASD 197
Query: 341 VWSCGCILGELFV 353
VWS G L EL
Sbjct: 198 VWSFGVTLYELLT 210
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 27/181 (14%)
Query: 176 LKKVRLENEKEGFPITAV-REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
+KK RL + + G + RE+ ILR++ H NI+ L +I +K+D + L+
Sbjct: 38 IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV----------LIL 87
Query: 235 EYMD----HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
E + D + ES E ++Q+LDG+ Y H + H D+K NI++ +
Sbjct: 88 ELVSGGELFDFLAEKES----LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLD 143
Query: 291 RG----EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
+ +KL DFG+A A + + N T + PE ++ E G D+WS G
Sbjct: 144 KNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGV 199
Query: 347 I 347
I
Sbjct: 200 I 200
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
E FS A D + ++L DP+RR+T Q+L+ W+K +
Sbjct: 233 EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 70/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E M+ DL + E G + E S Q+L+ + +CH L
Sbjct: 79 LDWFERPDSFVLILERMEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 136
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 137 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 192
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 193 RSAAVWSLGILLYDM 207
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 260 IMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI 319
I RQ+ G++Y +R F+HRD+ N L+ VK+ADFGL+R + D + N I
Sbjct: 179 IARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAI 238
Query: 320 TLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+ + PPE + RY DVW+ G +L E+F
Sbjct: 239 PIRWMPPESIF-YNRYTTESDVWAYGVVLWEIF 270
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 28/193 (14%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E+VA+K ++ E REI+ILR L H++IV + D+ + S
Sbjct: 36 TGEMVAVKALK-EGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEK--------S 86
Query: 230 FYLVFEYMD-HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
LV EY+ L L V ++ +Q+ +G++Y H ++++HR + N+L+
Sbjct: 87 VQLVMEYVPLGSLRDYLPRHCVGLAQL--LLFAQQICEGMAYLHAQHYIHRALAARNVLL 144
Query: 289 NNRGEVKLADFGLAR-------LYNA-EDRQRPYTNKVITLWYRPPELLLGEERYGPAID 340
+N VK+ DFGLA+ Y ED P WY P L E ++ A D
Sbjct: 145 DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP------VFWYAPE--CLKECKFYYASD 196
Query: 341 VWSCGCILGELFV 353
VWS G L EL
Sbjct: 197 VWSFGVTLYELLT 209
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 21/183 (11%)
Query: 175 ALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
LK E ++ F + E I+ Q +H N+++L +VT + + ++
Sbjct: 42 TLKSGYTEKQRRDF----LSEASIMGQFDHPNVIHLEGVVTKSTPVM----------IIT 87
Query: 235 EYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
E+M++ L L F + ++R + G+ Y N++HR + NIL+N+
Sbjct: 88 EFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLV 147
Query: 294 VKLADFGLARLYNAEDRQRPYTN----KVITLWYRPPELLLGEERYGPAIDVWSCGCILG 349
K++DFGL+R + YT+ K+ W P + ++ A DVWS G ++
Sbjct: 148 CKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY--RKFTSASDVWSYGIVMW 205
Query: 350 ELF 352
E+
Sbjct: 206 EVM 208
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIIIEFMTYGNLLDYLRECNRQ 106
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ + V + Q+ + Y K+NF+HRD+ N L+ VK+ADFGL+RL +
Sbjct: 107 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K W P L ++ DVW+ G +L E+
Sbjct: 167 TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 205
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIIIEFMTYGNLLDYLRECNRQ 106
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ + V + Q+ + Y K+NF+HRD+ N L+ VK+ADFGL+RL +
Sbjct: 107 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K W P L ++ DVW+ G +L E+
Sbjct: 167 TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 205
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 31/167 (18%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESG----- 248
E +++ L H +V L +VT K Y++ E+M L+ L+S
Sbjct: 233 EANVMKTLQHDKLVKLHAVVT-----------KEPIYIITEFMAKGSLLDFLKSDEGSKQ 281
Query: 249 ----MVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARL 304
++DF+ Q+ +G+++ +RN++HRD++ +NIL++ K+ADFGLAR+
Sbjct: 282 PLPKLIDFSA--------QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV 333
Query: 305 YNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
+ K W P + G + DVWS G +L E+
Sbjct: 334 IEDNEYTAREGAKFPIKWTAPEAINFGS--FTIKSDVWSFGILLMEI 378
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 27/181 (14%)
Query: 176 LKKVRLENEKEGFPITAV-REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
+KK RL + + G + RE+ ILR++ H NI+ L +I +K+D + L+
Sbjct: 59 IKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV----------LIL 108
Query: 235 EYMD----HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
E + D + ES E ++Q+LDG+ Y H + H D+K NI++ +
Sbjct: 109 ELVSGGELFDFLAEKES----LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLD 164
Query: 291 RG----EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
+ +KL DFG+A A + + N T + PE ++ E G D+WS G
Sbjct: 165 KNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGV 220
Query: 347 I 347
I
Sbjct: 221 I 221
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNV 97
E FS A D + ++L DP+RR+ Q+L+ W+K +
Sbjct: 254 EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKAI 293
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIITEFMTYGNLLDYLRECNRQ 104
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ + V + Q+ + Y K+NF+HRD+ N L+ VK+ADFGL+RL +
Sbjct: 105 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX 164
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K W P L ++ DVW+ G +L E+
Sbjct: 165 TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 203
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 20/182 (10%)
Query: 173 LVALKKVRLENEKEGFPITAVR-EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
+++ +K + + +E P V EI+IL++LNH I+ ++ D +Y
Sbjct: 167 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-----------DAEDYY 215
Query: 232 LVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR 291
+V E M+ + G E Q+L + Y H+ +HRD+K N+L++++
Sbjct: 216 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 275
Query: 292 GE---VKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELL--LGEERYGPAIDVWSCGC 346
E +K+ DFG +++ R T Y PE+L +G Y A+D WS G
Sbjct: 276 EEDCLIKITDFGHSKILGETSLMRTLCG---TPTYLAPEVLVSVGTAGYNRAVDCWSLGV 332
Query: 347 IL 348
IL
Sbjct: 333 IL 334
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 7 GNSGWAN-IELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSLMPP 65
G +G+ ++ L VI +C + P ++ L I K + + E ++ +
Sbjct: 317 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF--IPEVWAEVSE 374
Query: 66 GALDLLDKMLELDPERRITAEQALKSVWLKN 96
ALDL+ K+L +DP+ R T E+AL+ WL++
Sbjct: 375 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 35/188 (18%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+K ++ + + F + E ++ QL H N+V L ++ + +KG Y+V
Sbjct: 38 VAVKCIKNDATAQAF----LAEASVMTQLRHSNLVQLLGVIVE---------EKGGLYIV 84
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMR---------QLLDGLSYCHKRNFLHRDIKCS 284
EYM + +VD+ S++ + + + Y NF+HRD+
Sbjct: 85 TEYM-------AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAAR 137
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
N+L++ K++DFGL + E T K+ W P L E + DVWS
Sbjct: 138 NVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALR--EAAFSTKSDVWSF 191
Query: 345 GCILGELF 352
G +L E++
Sbjct: 192 GILLWEIY 199
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 20/182 (10%)
Query: 173 LVALKKVRLENEKEGFPITAVR-EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
+++ +K + + +E P V EI+IL++LNH I+ ++ D +Y
Sbjct: 181 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-----------DAEDYY 229
Query: 232 LVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR 291
+V E M+ + G E Q+L + Y H+ +HRD+K N+L++++
Sbjct: 230 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 289
Query: 292 GE---VKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELL--LGEERYGPAIDVWSCGC 346
E +K+ DFG +++ R T Y PE+L +G Y A+D WS G
Sbjct: 290 EEDCLIKITDFGHSKILGETSLMRTLCG---TPTYLAPEVLVSVGTAGYNRAVDCWSLGV 346
Query: 347 IL 348
IL
Sbjct: 347 IL 348
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 7 GNSGWAN-IELLQLEVISKLCGTPTPAVWPAVIKLPLWHTIKPKKIHRRRLREEFSLMPP 65
G +G+ ++ L VI +C + P ++ L I K + + E ++ +
Sbjct: 331 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF--IPEVWAEVSE 388
Query: 66 GALDLLDKMLELDPERRITAEQALKSVWLKN 96
ALDL+ K+L +DP+ R T E+AL+ WL++
Sbjct: 389 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIITEFMTYGNLLDYLRECNRQ 111
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ + V + Q+ + Y K+NF+HRD+ N L+ VK+ADFGL+RL +
Sbjct: 112 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 171
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K W P L ++ DVW+ G +L E+
Sbjct: 172 TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 210
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMG-LLESGMVDFN 253
E I+ Q +H NI+ L +++ + ++ EYM++ + L +F+
Sbjct: 96 EAGIMGQFSHHNIIRLEGVISKYKPMM----------IITEYMENGALDKFLREKDGEFS 145
Query: 254 EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRP 313
+ ++R + G+ Y N++HRD+ NIL+N+ K++DFGL+R+ +D +
Sbjct: 146 VLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE-DDPEAT 204
Query: 314 YTN---KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
YT K+ W P + ++ A DVWS G ++ E+
Sbjct: 205 YTTSGGKIPIRWTAPEA--ISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 14/132 (10%)
Query: 231 YLVFEYMDHD-------LMGLLESGMVDFNEVNN-ASIMRQLLDGLSYCH-KRNFLHRDI 281
Y+++EYM++D +L+ F + I++ +L+ SY H ++N HRD+
Sbjct: 119 YIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDV 178
Query: 282 KCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERY-GPAID 340
K SNILM+ G VKL+DFG + Y + + + T + PPE E Y G +D
Sbjct: 179 KPSNILMDKNGRVKLSDFGESE-YMVDKKIKGSRG---TYEFMPPEFFSNESSYNGAKVD 234
Query: 341 VWSCGCILGELF 352
+WS G L +F
Sbjct: 235 IWSLGICLYVMF 246
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 61 SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPESM 102
+ + +D L L +P RIT+E ALK WL + + E +
Sbjct: 293 NFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDL 334
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 19/181 (10%)
Query: 174 VALKKVRLEN-EKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYL 232
VA+K ++ + E E F ++E +++++ H N+V L + T + FY+
Sbjct: 60 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTLEP----------PFYI 105
Query: 233 VFEYMDHD--LMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
V EYM + L L E + V + Q+ + Y K+NF+HRD+ N L+
Sbjct: 106 VTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 165
Query: 291 RGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGE 350
VK+ADFGL+RL + K W P L + DVW+ G +L E
Sbjct: 166 NHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES--LAYNTFSIKSDVWAFGVLLWE 223
Query: 351 L 351
+
Sbjct: 224 I 224
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 24/188 (12%)
Query: 171 DELVALKKVRL---ENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDK 227
D VA+K +++ E ++ F + E I+ Q +H N+V+L +VT +
Sbjct: 71 DVAVAIKTLKVGYTEKQRRDF----LCEASIMGQFDHPNVVHLEGVVTRGKPVM------ 120
Query: 228 GSFYLVFEYMDHD-LMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
+V E+M++ L L F + ++R + G+ Y ++HRD+ NI
Sbjct: 121 ----IVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNI 176
Query: 287 LMNNRGEVKLADFGLARLYNAEDRQRPYTN---KVITLWYRPPELLLGEERYGPAIDVWS 343
L+N+ K++DFGL+R+ +D + YT K+ W P + ++ A DVWS
Sbjct: 177 LVNSNLVCKVSDFGLSRVIE-DDPEAVYTTTGGKIPVRWTAPEAIQY--RKFTSASDVWS 233
Query: 344 CGCILGEL 351
G ++ E+
Sbjct: 234 YGIVMWEV 241
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 26/162 (16%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMD----HDLMGLLESGM 249
RE+ ILRQ+ H N++ L ++ +++D + L+ E + D + ES
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVV----------LILELVSGGELFDFLAQKES-- 111
Query: 250 VDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRG----EVKLADFGLARLY 305
+E S ++Q+LDG++Y H + H D+K NI++ ++ +KL DFGLA +
Sbjct: 112 --LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--H 167
Query: 306 NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
ED + N T + PE ++ E G D+WS G I
Sbjct: 168 EIEDGVE-FKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGVI 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIITEFMTYGNLLDYLRECNRQ 106
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ + V + Q+ + Y K+NF+HRD+ N L+ VK+ADFGL+RL +
Sbjct: 107 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K W P L ++ DVW+ G +L E+
Sbjct: 167 TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 205
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIITEFMTYGNLLDYLRECNRQ 106
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ + V + Q+ + Y K+NF+HRD+ N L+ VK+ADFGL+RL +
Sbjct: 107 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K W P L ++ DVW+ G +L E+
Sbjct: 167 TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 205
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIITEFMTYGNLLDYLRECNRQ 104
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ + V + Q+ + Y K+NF+HRD+ N L+ VK+ADFGL+RL +
Sbjct: 105 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTF 164
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K W P L ++ DVW+ G +L E+
Sbjct: 165 TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 203
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 24/186 (12%)
Query: 174 VALKKVRL---ENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
VA+K +++ E ++ F + E I+ Q +H NI+ L +VT +
Sbjct: 76 VAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPNIIRLEGVVTKSKPVM--------- 122
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
+V E M++ L L F + ++R + G+ Y +HRD+ NIL+N
Sbjct: 123 -IVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILIN 181
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTN---KVITLWYRPPELLLGEERYGPAIDVWSCGC 346
+ K++DFGL+R+ +D + YT K+ W P + ++ A DVWS G
Sbjct: 182 SNLVCKVSDFGLSRVLE-DDPEAAYTTRGGKIPIRWTSPEA--IAYRKFTSASDVWSYGI 238
Query: 347 ILGELF 352
+L E+
Sbjct: 239 VLWEVM 244
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T L A K + ++E+E EI IL +H NIV L LD + +
Sbjct: 34 TSVLAAAKVIDTKSEEELEDYMV--EIDILASCDHPNIVKL----------LDAFYYENN 81
Query: 230 FYLVFEYMDHDLMGLLESGMVDF----NEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSN 285
+++ E+ G +++ M++ E + +Q LD L+Y H +HRD+K N
Sbjct: 82 LWILIEFC---AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGN 138
Query: 286 ILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEER----YGPAIDV 341
IL G++KLADFG++ QR + + T ++ PE+++ E Y DV
Sbjct: 139 ILFTLDGDIKLADFGVSAKNTRTXIQR-RDSFIGTPYWMAPEVVMCETSKDRPYDYKADV 197
Query: 342 WSCGCILGELFVKKP 356
WS G L E+ +P
Sbjct: 198 WSLGITLIEMAEIEP 212
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFN 253
E I+ Q +H NI++L +VT + ++ EYM++ L L F
Sbjct: 59 EASIMGQFDHPNIIHLEGVVTKCKPVM----------IITEYMENGSLDAFLRKNDGRFT 108
Query: 254 EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRP 313
+ ++R + G+ Y +++HRD+ NIL+N+ K++DFG++R+ +D +
Sbjct: 109 VIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE-DDPEAA 167
Query: 314 YTNK--VITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
YT + I + + PE + ++ A DVWS G ++ E+
Sbjct: 168 YTTRGGKIPIRWTAPE-AIAYRKFTSASDVWSYGIVMWEVM 207
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSD---ALDFRKDKGSFYLVFEYMDHDLMGLLESG 248
A+ E KIL +++ + IV+L K+D + Y ++ +D D G
Sbjct: 232 AMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN-VDEDNPG----- 285
Query: 249 MVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLA-RLYNA 307
F E Q++ GL + H+RN ++RD+K N+L+++ G V+++D GLA L
Sbjct: 286 ---FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG 342
Query: 308 EDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ + + Y T + PELLLGEE Y ++D ++ G L E+ + F
Sbjct: 343 QTKTKGYAG---TPGFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 261 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIITEFMTYGNLLDYLRECNRQ 310
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ N V + Q+ + Y K+NF+HR++ N L+ VK+ADFGL+RL +
Sbjct: 311 EVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 370
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K W P L ++ DVW+ G +L E+
Sbjct: 371 TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 409
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMV 250
++E +++++ H N+V L + T + FY++ E+M + L L E
Sbjct: 303 LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYIITEFMTYGNLLDYLRECNRQ 352
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
+ N V + Q+ + Y K+NF+HR++ N L+ VK+ADFGL+RL +
Sbjct: 353 EVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 412
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K W P L ++ DVW+ G +L E+
Sbjct: 413 TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 451
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
V E+++++ + HKNI+NL T G Y++ EY +L L +
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQD----------GPLYVIVEYASKGNLREYLRARRP 137
Query: 248 -GM---VDFNEV--------NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
GM D N V + S QL G+ Y + +HRD+ N+L+ +K
Sbjct: 138 PGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 197
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR N D + TN + + + PE L + Y DVWS G ++ E+F
Sbjct: 198 IADFGLARDINNIDXXKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSD---ALDFRKDKGSFYLVFEYMDHDLMGLLESG 248
A+ E KIL +++ + IV+L K+D + Y ++ +D D G
Sbjct: 232 AMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN-VDEDNPG----- 285
Query: 249 MVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLA-RLYNA 307
F E Q++ GL + H+RN ++RD+K N+L+++ G V+++D GLA L
Sbjct: 286 ---FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG 342
Query: 308 EDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ + + Y T + PELLLGEE Y ++D ++ G L E+ + F
Sbjct: 343 QTKTKGYAG---TPGFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSD---ALDFRKDKGSFYLVFEYMDHDLMGLLESG 248
A+ E KIL +++ + IV+L K+D + Y ++ +D D G
Sbjct: 232 AMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN-VDEDNPG----- 285
Query: 249 MVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLA-RLYNA 307
F E Q++ GL + H+RN ++RD+K N+L+++ G V+++D GLA L
Sbjct: 286 ---FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG 342
Query: 308 EDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ + + Y T + PELLLGEE Y ++D ++ G L E+ + F
Sbjct: 343 QTKTKGYAG---TPGFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFN 253
E I+ Q +H NI++L +VT + ++ EYM++ L L F
Sbjct: 65 EASIMGQFDHPNIIHLEGVVTKCKPVM----------IITEYMENGSLDAFLRKNDGRFT 114
Query: 254 EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRP 313
+ ++R + G+ Y +++HRD+ NIL+N+ K++DFG++R+ +D +
Sbjct: 115 VIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE-DDPEAA 173
Query: 314 YTNK--VITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
YT + I + + PE + ++ A DVWS G ++ E+
Sbjct: 174 YTTRGGKIPIRWTAPE-AIAYRKFTSASDVWSYGIVMWEVM 213
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
V E+++++ + HKNI+NL T G Y++ EY +L L +
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQD----------GPLYVIVEYASKGNLREYLRARRP 137
Query: 248 -GM---VDFNEV--------NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
GM D N V + S QL G+ Y + +HRD+ N+L+ +K
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 197
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR N D + TN + + + PE L + Y DVWS G ++ E+F
Sbjct: 198 IADFGLARDINNIDXXKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSD---ALDFRKDKGSFYLVFEYMDHDLMGLLESG 248
A+ E KIL +++ + IV+L K+D + Y ++ +D D G
Sbjct: 232 AMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN-VDEDNPG----- 285
Query: 249 MVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLA-RLYNA 307
F E Q++ GL + H+RN ++RD+K N+L+++ G V+++D GLA L
Sbjct: 286 ---FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG 342
Query: 308 EDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ + + Y T + PELLLGEE Y ++D ++ G L E+ + F
Sbjct: 343 QTKTKGYAG---TPGFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 26/162 (16%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMD----HDLMGLLESGM 249
RE+ ILRQ+ H N++ L ++ +++D + L+ E + D + ES
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVV----------LILELVSGGELFDFLAQKES-- 111
Query: 250 VDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRG----EVKLADFGLARLY 305
+E S ++Q+LDG++Y H + H D+K NI++ ++ +KL DFGLA +
Sbjct: 112 --LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--H 167
Query: 306 NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
ED + N T + PE ++ E G D+WS G I
Sbjct: 168 EIED-GVEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGVI 207
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH----DLMGLLESG 248
+ E +++ L H +V L +VT + Y++ EYM D + E G
Sbjct: 56 LEEANLMKTLQHDKLVRLYAVVTREE----------PIYIITEYMAKGSLLDFLKSDEGG 105
Query: 249 MVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAE 308
V ++ + S Q+ +G++Y ++N++HRD++ +N+L++ K+ADFGLAR+
Sbjct: 106 KVLLPKLIDFSA--QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 163
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
+ K W P + G + DVWS G +L E+
Sbjct: 164 EYTAREGAKFPIKWTAPEAINFG--CFTIKSDVWSFGILLYEI 204
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
V E+++++ + HKNI+NL T G Y++ EY +L L +
Sbjct: 134 VSEMEMMKMIGKHKNIINLLGACTQD----------GPLYVIVEYASKGNLREYLRARRP 183
Query: 248 -GM---VDFNEV--------NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
GM D N V + S QL G+ Y + +HRD+ N+L+ +K
Sbjct: 184 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 243
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR N D + TN + + + PE L + Y DVWS G ++ E+F
Sbjct: 244 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFT 300
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 12/191 (6%)
Query: 179 VRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSD----ALDFR-KDKGSFYLV 233
V+L+N + F + + + ++L++ R+++ + L + +D + YLV
Sbjct: 93 VKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV 152
Query: 234 FEY-MDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRG 292
+Y + DL+ LL E + +++ + H+ +++HRDIK NILM+ G
Sbjct: 153 MDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG 212
Query: 293 EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL----GEERYGPAIDVWSCG-CI 347
++LADFG + L ED + V T Y PE+L G+ RYGP D WS G C+
Sbjct: 213 HIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCM 271
Query: 348 LGELFVKKPLF 358
L+ + P +
Sbjct: 272 YEMLYGETPFY 282
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 23/170 (13%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDF-- 252
EI IL +H NIV L LD + + +++ E+ G +++ M++
Sbjct: 84 EIDILASCDHPNIVKL----------LDAFYYENNLWILIEFC---AGGAVDAVMLELER 130
Query: 253 --NEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
E + +Q LD L+Y H +HRD+K NIL G++KLADFG++ N
Sbjct: 131 PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRTI 189
Query: 311 QRPYTNKVITLWYRPPELLLGEER----YGPAIDVWSCGCILGELFVKKP 356
QR + + T ++ PE+++ E Y DVWS G L E+ +P
Sbjct: 190 QR-RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 26/162 (16%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMD----HDLMGLLESGM 249
RE+ ILRQ+ H N++ L ++ +++D + L+ E + D + ES
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVV----------LILELVSGGELFDFLAQKES-- 111
Query: 250 VDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRG----EVKLADFGLARLY 305
+E S ++Q+LDG++Y H + H D+K NI++ ++ +KL DFGLA +
Sbjct: 112 --LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--H 167
Query: 306 NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
ED + N T + PE ++ E G D+WS G I
Sbjct: 168 EIED-GVEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGVI 207
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 26/162 (16%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMD----HDLMGLLESGM 249
RE+ ILRQ+ H N++ L ++ +++D + L+ E + D + ES
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVV----------LILELVSGGELFDFLAQKES-- 111
Query: 250 VDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRG----EVKLADFGLARLY 305
+E S ++Q+LDG++Y H + H D+K NI++ ++ +KL DFGLA +
Sbjct: 112 --LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--H 167
Query: 306 NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
ED + N T + PE ++ E G D+WS G I
Sbjct: 168 EIED-GVEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGVI 207
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 26/162 (16%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMD----HDLMGLLESGM 249
RE+ ILRQ+ H N++ L ++ +++D + L+ E + D + ES
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVV----------LILELVSGGELFDFLAQKES-- 111
Query: 250 VDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRG----EVKLADFGLARLY 305
+E S ++Q+LDG++Y H + H D+K NI++ ++ +KL DFGLA +
Sbjct: 112 --LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--H 167
Query: 306 NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
ED + N T + PE ++ E G D+WS G I
Sbjct: 168 EIED-GVEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGVI 207
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 29/197 (14%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYL 232
VA+K ++ + +E V E+++++ + HKNI+NL T G Y+
Sbjct: 70 VAVKMLKDDATEEDLS-DLVSEMEMMKMIGKHKNIINLLGACTQD----------GPLYV 118
Query: 233 VFEYMDH-DLMGLLES----GM---VDFNEV--------NNASIMRQLLDGLSYCHKRNF 276
+ EY +L L + GM D N V + S QL G+ Y +
Sbjct: 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC 178
Query: 277 LHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
+HRD+ N+L+ +K+ADFGLAR N D + TN + + + PE L + Y
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-DRVYT 237
Query: 337 PAIDVWSCGCILGELFV 353
DVWS G ++ E+F
Sbjct: 238 HQSDVWSFGVLMWEIFT 254
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 23/170 (13%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDF-- 252
EI IL +H NIV L LD + + +++ E+ G +++ M++
Sbjct: 84 EIDILASCDHPNIVKL----------LDAFYYENNLWILIEFC---AGGAVDAVMLELER 130
Query: 253 --NEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
E + +Q LD L+Y H +HRD+K NIL G++KLADFG++ N
Sbjct: 131 PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRXI 189
Query: 311 QRPYTNKVITLWYRPPELLLGEER----YGPAIDVWSCGCILGELFVKKP 356
QR + + T ++ PE+++ E Y DVWS G L E+ +P
Sbjct: 190 QR-RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 21/183 (11%)
Query: 175 ALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
ALK E ++ F + E I+ Q +H NI+ L +VT A+ +V
Sbjct: 84 ALKAGYTERQRRDF----LSEASIMGQFDHPNIIRLEGVVTRGRLAM----------IVT 129
Query: 235 EYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
EYM++ L L + F + ++R + G+ Y ++HRD+ N+L+++
Sbjct: 130 EYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLV 189
Query: 294 VKLADFGLARLYNAEDRQRPYTN---KVITLWYRPPELLLGEERYGPAIDVWSCGCILGE 350
K++DFGL+R+ +D YT K+ W P + + A DVWS G ++ E
Sbjct: 190 CKVSDFGLSRVLE-DDPDAAYTTTGGKIPIRWTAPEAIAF--RTFSSASDVWSFGVVMWE 246
Query: 351 LFV 353
+
Sbjct: 247 VLA 249
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
V E+++++ + HKNI+NL T G Y++ EY +L L +
Sbjct: 77 VSEMEMMKMIGKHKNIINLLGACTQD----------GPLYVIVEYASKGNLREYLRARRP 126
Query: 248 -GM---VDFNEV--------NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
GM D N V + S QL G+ Y + +HRD+ N+L+ +K
Sbjct: 127 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 186
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR N D + TN + + + PE L + Y DVWS G ++ E+F
Sbjct: 187 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 246 ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE---VKLADFGLA 302
E G F E A IMR + + + H N HRD+K N+L ++ + +KL DFG A
Sbjct: 119 ERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178
Query: 303 RLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ E Q T +Y PE +LG E+Y + D+WS G I+ L P F
Sbjct: 179 K----ETTQNALQTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPF 229
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 26/162 (16%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMD----HDLMGLLESGM 249
RE+ ILRQ+ H NI+ L ++ +++D + L+ E + D + ES
Sbjct: 64 REVSILRQVLHPNIITLHDVYENRTDVV----------LILELVSGGELFDFLAQKES-- 111
Query: 250 VDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRG----EVKLADFGLARLY 305
+E S ++Q+LDG++Y H + H D+K NI++ ++ +KL DFGLA +
Sbjct: 112 --LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--H 167
Query: 306 NAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 347
ED + N T + PE ++ E G D+WS G I
Sbjct: 168 EIED-GVEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGVI 207
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
V E+++++ + HKNI+NL T G Y++ EY +L L +
Sbjct: 75 VSEMEMMKMIGKHKNIINLLGACTQD----------GPLYVIVEYASKGNLREYLRARRP 124
Query: 248 -GM---VDFNEV--------NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
GM D N V + S QL G+ Y + +HRD+ N+L+ +K
Sbjct: 125 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMK 184
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR N D + TN + + + PE L + Y DVWS G ++ E+F
Sbjct: 185 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
V E+++++ + HKNI+NL T G Y++ EY +L L +
Sbjct: 80 VSEMEMMKMIGKHKNIINLLGACTQD----------GPLYVIVEYASKGNLREYLRARRP 129
Query: 248 -GM---VDFNEV--------NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
GM D N V + S QL G+ Y + +HRD+ N+L+ +K
Sbjct: 130 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 189
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR N D + TN + + + PE L + Y DVWS G ++ E+F
Sbjct: 190 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 246 ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE---VKLADFGLA 302
E G F E A IMR + + + H N HRD+K N+L ++ + +KL DFG A
Sbjct: 100 ERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 159
Query: 303 RLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ E Q T +Y PE +LG E+Y + D+WS G I+ L P F
Sbjct: 160 K----ETTQNALQTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPF 210
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 25/160 (15%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFN 253
EI ++ QL+H N++ L + K+D + LV EY+D +L + +
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKNDIV----------LVMEYVDGGELFDRIIDESYNLT 185
Query: 254 EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRG--EVKLADFGLARLYNAEDRQ 311
E++ M+Q+ +G+ + H+ LH D+K NIL NR ++K+ DFGLAR Y ++
Sbjct: 186 ELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK- 244
Query: 312 RPYTNKVITLWYRPPELLLGE----ERYGPAIDVWSCGCI 347
+ + + PE L E + D+WS G I
Sbjct: 245 -------LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVI 277
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLM-GLLESGMVDFN 253
E I+ Q H NI+ L +VT+ + ++ E+M++ + L F
Sbjct: 65 EASIMGQFEHPNIIRLEGVVTNSMPVM----------ILTEFMENGALDSFLRLNDGQFT 114
Query: 254 EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRP 313
+ ++R + G+ Y + +++HRD+ NIL+N+ K++DFGL+R
Sbjct: 115 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 174
Query: 314 YTN----KVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKPLF 358
YT+ K+ W P + ++ A D WS G ++ E+ F ++P +
Sbjct: 175 YTSSLGGKIPIRWTAPEAIAF--RKFTSASDAWSYGIVMWEVMSFGERPYW 223
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 23/170 (13%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDF-- 252
EI IL +H NIV L LD + + +++ E+ G +++ M++
Sbjct: 84 EIDILASCDHPNIVKL----------LDAFYYENNLWILIEFC---AGGAVDAVMLELER 130
Query: 253 --NEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
E + +Q LD L+Y H +HRD+K NIL G++KLADFG++ +
Sbjct: 131 PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQ 190
Query: 311 QRPYTNKVITLWYRPPELLLGEER----YGPAIDVWSCGCILGELFVKKP 356
+R + T ++ PE+++ E Y DVWS G L E+ +P
Sbjct: 191 RRDXF--IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 172 ELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
E VA+K ++ K+ F A E+++L +N K+ ++ + FR
Sbjct: 80 EWVAIKIIK---NKKAFLNQAQIEVRLLELMN-KHDTEMKYYIVHLKRHFMFR---NHLC 132
Query: 232 LVFEYMDHDLMGLLESGMVDFNEVN---NASIMRQLLDGLSYCH--KRNFLHRDIKCSNI 286
LVFE + ++L LL + +F V+ +Q+ L + + + +H D+K NI
Sbjct: 133 LVFEMLSYNLYDLLRN--TNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENI 190
Query: 287 LMNN--RGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
L+ N R +K+ DFG + + QR Y + + +YR PE+LLG Y AID+WS
Sbjct: 191 LLCNPKRSAIKIVDFGSS----CQLGQRIY-QXIQSRFYRSPEVLLGMP-YDLAIDMWSL 244
Query: 345 GCILGELFVKKPLF 358
GCIL E+ +PLF
Sbjct: 245 GCILVEMHTGEPLF 258
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
V E+++++ + HKNI+NL T G Y++ EY +L L +
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQD----------GPLYVIVEYASKGNLREYLRARRP 137
Query: 248 -GM---VDFNEV--------NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
GM D N V + S QL G+ Y + +HRD+ N+L+ +K
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 197
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR N D + TN + + + PE L + Y DVWS G ++ E+F
Sbjct: 198 IADFGLARDINNIDYYKNTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T LVA+K+++ + REI+IL+ L+ IV R + + + S
Sbjct: 38 TGALVAVKQLQHSGPDQQRDFQ--REIQILKALHSDFIVKYR--------GVSYGPGRQS 87
Query: 230 FYLVFEYMDHD-LMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
LV EY+ L L+ + Q+ G+ Y R +HRD+ NIL+
Sbjct: 88 LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV 147
Query: 289 NNRGEVKLADFGLARLYNAEDR----QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
+ VK+ADFGLA+L + + P + + WY P L + + DVWS
Sbjct: 148 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI--FWYAPES--LSDNIFSRQSDVWSF 203
Query: 345 GCILGELFV 353
G +L ELF
Sbjct: 204 GVVLYELFT 212
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 172 ELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
E VA+K ++ K+ F A E+++L +N K+ ++ + FR
Sbjct: 61 EWVAIKIIK---NKKAFLNQAQIEVRLLELMN-KHDTEMKYYIVHLKRHFMFR---NHLC 113
Query: 232 LVFEYMDHDLMGLLESGMVDFNEVN---NASIMRQLLDGLSYCH--KRNFLHRDIKCSNI 286
LVFE + ++L LL + +F V+ +Q+ L + + + +H D+K NI
Sbjct: 114 LVFEMLSYNLYDLLRN--TNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENI 171
Query: 287 LMNN--RGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
L+ N R +K+ DFG + + QR Y + + +YR PE+LLG Y AID+WS
Sbjct: 172 LLCNPKRSAIKIVDFGSS----CQLGQRIY-QXIQSRFYRSPEVLLGMP-YDLAIDMWSL 225
Query: 345 GCILGELFVKKPLF 358
GCIL E+ +PLF
Sbjct: 226 GCILVEMHTGEPLF 239
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T LVA+K+++ + REI+IL+ L+ IV R + + + S
Sbjct: 39 TGALVAVKQLQHSGPDQQRDFQ--REIQILKALHSDFIVKYR--------GVSYGPGRQS 88
Query: 230 FYLVFEYMDHD-LMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
LV EY+ L L+ + Q+ G+ Y R +HRD+ NIL+
Sbjct: 89 LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV 148
Query: 289 NNRGEVKLADFGLARLYNAEDR----QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
+ VK+ADFGLA+L + + P + + WY P L + + DVWS
Sbjct: 149 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI--FWYAPES--LSDNIFSRQSDVWSF 204
Query: 345 GCILGELFV 353
G +L ELF
Sbjct: 205 GVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T LVA+K+++ + REI+IL+ L+ IV R + + + S
Sbjct: 51 TGALVAVKQLQHSGPDQQRDFQ--REIQILKALHSDFIVKYR--------GVSYGPGRQS 100
Query: 230 FYLVFEYMDHD-LMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
LV EY+ L L+ + Q+ G+ Y R +HRD+ NIL+
Sbjct: 101 LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV 160
Query: 289 NNRGEVKLADFGLARLYNAEDR----QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
+ VK+ADFGLA+L + + P + + WY P L + + DVWS
Sbjct: 161 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI--FWYAPES--LSDNIFSRQSDVWSF 216
Query: 345 GCILGELFV 353
G +L ELF
Sbjct: 217 GVVLYELFT 225
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 17/181 (9%)
Query: 175 ALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
ALK E ++ F + E I+ Q +H NI+ L +VT A+ +V
Sbjct: 84 ALKAGYTERQRRDF----LSEASIMGQFDHPNIIRLEGVVTRGRLAM----------IVT 129
Query: 235 EYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
EYM++ L L + F + ++R + G+ Y ++HRD+ N+L+++
Sbjct: 130 EYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLV 189
Query: 294 VKLADFGLAR-LYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
K++DFGL+R L + D T I + + PE + + A DVWS G ++ E+
Sbjct: 190 CKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPE-AIAFRTFSSASDVWSFGVVMWEVL 248
Query: 353 V 353
Sbjct: 249 A 249
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 75 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNXGVL 132
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 133 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 189 RSAAVWSLGILLYDM 203
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 19/181 (10%)
Query: 174 VALKKVRLEN-EKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYL 232
VA+K ++ + E E F ++E +++++ H N+V L + T + FY+
Sbjct: 248 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREP----------PFYI 293
Query: 233 VFEYMDHD--LMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
+ E+M + L L E + + V + Q+ + Y K+NF+HR++ N L+
Sbjct: 294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGE 353
Query: 291 RGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGE 350
VK+ADFGL+RL + K W P L ++ DVW+ G +L E
Sbjct: 354 NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWE 411
Query: 351 L 351
+
Sbjct: 412 I 412
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 15/161 (9%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFN 253
E I+ Q +H NI++L +VT + ++ EYM++ L L F
Sbjct: 80 EASIMGQFDHPNIIHLEGVVTKCKPVM----------IITEYMENGSLDAFLRKNDGRFT 129
Query: 254 EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRP 313
+ ++R + G+ Y + +HRD+ NIL+N+ K++DFG++R+ +D +
Sbjct: 130 VIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLE-DDPEAA 188
Query: 314 YTNK--VITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
YT + I + + PE + ++ A DVWS G ++ E+
Sbjct: 189 YTTRGGKIPIRWTAPE-AIAYRKFTSASDVWSYGIVMWEVM 228
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 7/134 (5%)
Query: 227 KGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSN 285
K + + V EY++ DLM ++S F+ +++ GL + H + ++RD+K N
Sbjct: 91 KENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDN 149
Query: 286 ILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWSC 344
IL++ G +K+ADFG+ + D + TN+ T Y PE+LLG ++Y ++D WS
Sbjct: 150 ILLDKDGHIKIADFGMCKENMLGDAK---TNEFCGTPDYIAPEILLG-QKYNHSVDWWSF 205
Query: 345 GCILGELFVKKPLF 358
G +L E+ + + F
Sbjct: 206 GVLLYEMLIGQSPF 219
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
V E+++++ + HKNI+NL T G Y++ EY +L L +
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQD----------GPLYVIVEYASKGNLREYLRARRP 137
Query: 248 -GM---VDFNEV--------NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
GM D N V + S QL G+ Y + +HRD+ N+L+ ++
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMR 197
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR N D + TN + + + PE L + Y DVWS G ++ E+F
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 95/195 (48%), Gaps = 25/195 (12%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T L A K + ++E+E + EI+IL +H IV L L G
Sbjct: 35 TGALAAAKVIETKSEEELE--DYIVEIEILATCDHPYIVKL----------LGAYYHDGK 82
Query: 230 FYLVFEYMDHDLMGLLESGMVDFN----EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSN 285
+++ E+ G +++ M++ + E + RQ+L+ L++ H + +HRD+K N
Sbjct: 83 LWIMIEFCPG---GAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGN 139
Query: 286 ILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEER----YGPAIDV 341
+LM G+++LADFG++ N + Q+ + + T ++ PE+++ E Y D+
Sbjct: 140 VLMTLEGDIRLADFGVSA-KNLKTLQK-RDSFIGTPYWMAPEVVMCETMKDTPYDYKADI 197
Query: 342 WSCGCILGELFVKKP 356
WS G L E+ +P
Sbjct: 198 WSLGITLIEMAQIEP 212
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 122 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 179
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 180 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 235
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 236 RSAAVWSLGILLYDM 250
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 172 ELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
E VA+K ++ K+ F A E+++L +N K+ ++ + FR
Sbjct: 80 EWVAIKIIK---NKKAFLNQAQIEVRLLELMN-KHDTEMKYYIVHLKRHFMFR---NHLC 132
Query: 232 LVFEYMDHDLMGLLESGMVDFNEVN---NASIMRQLLDGLSYCH--KRNFLHRDIKCSNI 286
LVFE + ++L LL + +F V+ +Q+ L + + + +H D+K NI
Sbjct: 133 LVFEMLSYNLYDLLRN--TNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENI 190
Query: 287 LMNN--RGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
L+ N R +K+ DFG + + QR Y + + +YR PE+LLG Y AID+WS
Sbjct: 191 LLCNPKRXAIKIVDFGSS----CQLGQRIY-QXIQSRFYRSPEVLLGMP-YDLAIDMWSL 244
Query: 345 GCILGELFVKKPLF 358
GCIL E+ +PLF
Sbjct: 245 GCILVEMHTGEPLF 258
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 94 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 151
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 152 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 207
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 208 RSAAVWSLGILLYDM 222
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 79 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 136
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 137 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 192
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 193 RSAAVWSLGILLYDM 207
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 80 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 137
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 138 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 193
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 194 RSAAVWSLGILLYDM 208
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 107 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 164
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 165 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 221 RSAAVWSLGILLYDM 235
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 94 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 151
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 152 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 207
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 208 RSAAVWSLGILLYDM 222
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 122 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 179
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 180 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 235
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 236 RSAAVWSLGILLYDM 250
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 107 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 164
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 165 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 221 RSAAVWSLGILLYDM 235
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 80 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 137
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 138 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 193
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 194 RSAAVWSLGILLYDM 208
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 108 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 165
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 166 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 222 RSAAVWSLGILLYDM 236
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 107 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 164
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 165 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 221 RSAAVWSLGILLYDM 235
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 108 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 165
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 166 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 222 RSAAVWSLGILLYDM 236
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 108 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 165
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 166 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 222 RSAAVWSLGILLYDM 236
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 95/195 (48%), Gaps = 25/195 (12%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T L A K + ++E+E + EI+IL +H IV L L G
Sbjct: 43 TGALAAAKVIETKSEEELE--DYIVEIEILATCDHPYIVKL----------LGAYYHDGK 90
Query: 230 FYLVFEYMDHDLMGLLESGMVDFN----EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSN 285
+++ E+ G +++ M++ + E + RQ+L+ L++ H + +HRD+K N
Sbjct: 91 LWIMIEFCPG---GAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGN 147
Query: 286 ILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEER----YGPAIDV 341
+LM G+++LADFG++ N + Q+ + + T ++ PE+++ E Y D+
Sbjct: 148 VLMTLEGDIRLADFGVSA-KNLKTLQK-RDSFIGTPYWMAPEVVMCETMKDTPYDYKADI 205
Query: 342 WSCGCILGELFVKKP 356
WS G L E+ +P
Sbjct: 206 WSLGITLIEMAQIEP 220
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 95 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 152
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 153 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 208
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 209 RSAAVWSLGILLYDM 223
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 108 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 165
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 166 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 222 RSAAVWSLGILLYDM 236
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 107 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 164
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 165 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 221 RSAAVWSLGILLYDM 235
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 95 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 152
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 153 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 208
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 209 RSAAVWSLGILLYDM 223
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 95 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 152
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 153 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 208
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 209 RSAAVWSLGILLYDM 223
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 127 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 184
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 185 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 240
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 241 RSAAVWSLGILLYDM 255
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 80 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 137
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 138 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 193
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 194 RSAAVWSLGILLYDM 208
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 22/196 (11%)
Query: 164 FSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDF 223
F VS LV +K+ K +RE+++L + N IV F
Sbjct: 85 FKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA---------F 135
Query: 224 RKDKGSFYLVFEYMDHDLMG--LLESGMVDFNEVNNASIMRQLLDGLSYC-HKRNFLHRD 280
D G + E+MD + L ++G + + SI ++ GL+Y K +HRD
Sbjct: 136 YSD-GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHKIMHRD 192
Query: 281 IKCSNILMNNRGEVKLADFGLA-RLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAI 339
+K SNIL+N+RGE+KL DFG++ +L ++ + V T Y PE L G Y
Sbjct: 193 VKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPERLQG-THYSVQS 246
Query: 340 DVWSCGCILGELFVKK 355
D+WS G L E+ V +
Sbjct: 247 DIWSMGLSLVEMAVGR 262
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 114 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 171
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 172 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 227
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 228 RSAAVWSLGILLYDM 242
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 122 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 179
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 180 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 235
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 236 RSAAVWSLGILLYDM 250
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 2/130 (1%)
Query: 230 FYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
+L+ +Y++ + S F E + +++ L + HK ++RDIK NIL++
Sbjct: 134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD 193
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL-GEERYGPAIDVWSCGCIL 348
+ G V L DFGL++ + A++ +R Y + T+ Y P+++ G+ + A+D WS G ++
Sbjct: 194 SNGHVVLTDFGLSKEFVADETERAY-DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLM 252
Query: 349 GELFVKKPLF 358
EL F
Sbjct: 253 YELLTGASPF 262
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 73/134 (54%), Gaps = 7/134 (5%)
Query: 227 KGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSN 285
K + + V EY++ DLM ++S F+ +++ GL + H + ++RD+K N
Sbjct: 90 KENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDN 148
Query: 286 ILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWSC 344
IL++ G +K+ADFG+ + D + TN T Y PE+LLG ++Y ++D WS
Sbjct: 149 ILLDKDGHIKIADFGMCKENMLGDAK---TNXFCGTPDYIAPEILLG-QKYNHSVDWWSF 204
Query: 345 GCILGELFVKKPLF 358
G +L E+ + + F
Sbjct: 205 GVLLYEMLIGQSPF 218
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 78 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 135
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 136 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 191
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 192 RSAAVWSLGILLYDM 206
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 102 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 159
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 160 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 215
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 216 RSAAVWSLGILLYDM 230
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 28/169 (16%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESG------ 248
E+ I+R H N+V + + YLV E + LM L+ G
Sbjct: 92 EVVIMRDYQHFNVVEMYK-----------------SYLVGEEL-WVLMEFLQGGALTDIV 133
Query: 249 -MVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNA 307
V NE A++ +L L+Y H + +HRDIK +IL+ G VKL+DFG +
Sbjct: 134 SQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK 193
Query: 308 EDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKP 356
+ +R V T ++ PE ++ Y +D+WS G ++ E+ +P
Sbjct: 194 DVPKRKXL--VGTPYWMAPE-VISRSLYATEVDIWSLGIMVIEMVDGEP 239
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 75 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 132
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 133 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 189 RSAAVWSLGILLYDM 203
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 41/167 (24%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESG----- 248
E +++ L H +V L +VT K Y++ E+M L+ L+S
Sbjct: 227 EANVMKTLQHDKLVKLHAVVT-----------KEPIYIITEFMAKGSLLDFLKSDEGSKQ 275
Query: 249 ----MVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARL 304
++DF+ Q+ +G+++ +RN++HRD++ +NIL++ K+ADFGLAR+
Sbjct: 276 PLPKLIDFSA--------QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV 327
Query: 305 YNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
K W P + G + DVWS G +L E+
Sbjct: 328 ----------GAKFPIKWTAPEAINFGS--FTIKSDVWSFGILLMEI 362
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 17/166 (10%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMVDF 252
E IL ++ H IV+L + + G YL+ EY+ M L G+ F
Sbjct: 71 ERNILEEVKHPFIVDL----------IYAFQTGGKLYLILEYLSGGELFMQLEREGI--F 118
Query: 253 NEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQR 312
E + ++ L + H++ ++RD+K NI++N++G VKL DFGL + + D
Sbjct: 119 MEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTV 177
Query: 313 PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+T T+ Y PE+L+ + A+D WS G ++ ++ P F
Sbjct: 178 THTF-CGTIEYMAPEILM-RSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
+ E+++++ + HKNI+NL T G Y++ EY +L L++
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQD----------GPLYVIVEYASKGNLREYLQARRP 130
Query: 248 -GM-VDFNEVNN----------ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
G+ FN +N S Q+ G+ Y + +HRD+ N+L+ +K
Sbjct: 131 PGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 190
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR + D + TN + + + PE L + Y DVWS G +L E+F
Sbjct: 191 IADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 221 LDFRKDKGSFYLVFEYMD--HDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFL 277
LD+ + SF L+ E + DL + E G + E S Q+L+ + +CH L
Sbjct: 75 LDWFERPDSFVLILERPEPVQDLFDFITERGAL--QEELARSFFWQVLEAVRHCHNCGVL 132
Query: 278 HRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYG 336
HRDIK NIL++ NRGE+KL DFG L + YT+ T Y PPE + +G
Sbjct: 133 HRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 337 PAIDVWSCGCILGEL 351
+ VWS G +L ++
Sbjct: 189 RSAAVWSLGILLYDM 203
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
V E+++++ + HKNI++L T G Y++ EY +L L +
Sbjct: 88 VSEMEMMKMIGKHKNIIHLLGACTQD----------GPLYVIVEYASKGNLREYLRARRP 137
Query: 248 -GM---VDFNEV--------NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
GM D N V + S QL G+ Y + +HRD+ N+L+ +K
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 197
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR N D + TN + + + PE L + Y DVWS G ++ E+F
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
V E+++++ + HKNI+ L T G Y++ EY +L L +
Sbjct: 88 VSEMEMMKMIGKHKNIITLLGACTQD----------GPLYVIVEYASKGNLREYLRARRP 137
Query: 248 -GM---VDFNEV--------NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
GM D N V + S QL G+ Y + +HRD+ N+L+ +K
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 197
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR N D + TN + + + PE L + Y DVWS G ++ E+F
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
V E+++++ + HKNI+NL T G Y++ Y +L L +
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQD----------GPLYVIVAYASKGNLREYLRARRP 137
Query: 248 -GM---VDFNEV--------NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
GM D N V + S QL G+ Y + +HRD+ N+L+ +K
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 197
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR N D + TN + + + PE L + Y DVWS G ++ E+F
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 19/189 (10%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T LVA+K+++ + REI+IL+ L+ IV R + + +
Sbjct: 35 TGALVAVKQLQHSGPDQQRDFQ--REIQILKALHSDFIVKYR--------GVSYGPGRPE 84
Query: 230 FYLVFEYMDHD-LMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
LV EY+ L L+ + Q+ G+ Y R +HRD+ NIL+
Sbjct: 85 LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV 144
Query: 289 NNRGEVKLADFGLARLYNAEDR----QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
+ VK+ADFGLA+L + + P + + WY P L + + DVWS
Sbjct: 145 ESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPI--FWYAPES--LSDNIFSRQSDVWSF 200
Query: 345 GCILGELFV 353
G +L ELF
Sbjct: 201 GVVLYELFT 209
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 37/186 (19%)
Query: 176 LKKVRLENEKEGFPITAV-REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
+KK R ++ + G + RE+ IL+++ H N++ L E+ +K+D +
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI------------- 90
Query: 235 EYMDHDLMGLLESG--MVDF-------NEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSN 285
L+G L +G + DF E ++Q+L+G+ Y H H D+K N
Sbjct: 91 ------LIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN 144
Query: 286 ILMNNRG----EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDV 341
I++ +R +K+ DFGLA + D + N T + PE ++ E G D+
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADM 200
Query: 342 WSCGCI 347
WS G I
Sbjct: 201 WSIGVI 206
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLK 95
E FS A D + ++L DP++R+T + +L+ W+K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH----DLMGLLESG 248
+ E +++ L H +V L +VT + Y++ E+M D + E G
Sbjct: 55 LEEANLMKTLQHDKLVRLYAVVTKEE----------PIYIITEFMAKGSLLDFLKSDEGG 104
Query: 249 MVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAE 308
V ++ + S Q+ +G++Y ++N++HRD++ +N+L++ K+ADFGLAR+
Sbjct: 105 KVLLPKLIDFS--AQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 162
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
+ K W P + G + +VWS G +L E+
Sbjct: 163 EYTAREGAKFPIKWTAPEAINFG--CFTIKSNVWSFGILLYEI 203
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 91/214 (42%), Gaps = 29/214 (13%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFP-----ITAVREIKILRQLN-- 203
+ PL G F+ TD L KV N G+ +T E+ +L ++
Sbjct: 35 LGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAG 94
Query: 204 --HKNIVNLREIVTDKSDALDFRKDKGSFYLVFE--YMDHDLMGLL-ESGMVDFNEVNNA 258
H ++ L LD+ + + F LV E DL + E G E +
Sbjct: 95 GGHPGVIRL----------LDWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSR 142
Query: 259 SIMRQLLDGLSYCHKRNFLHRDIKCSNILMN-NRGEVKLADFGLARLYNAEDRQRPYTNK 317
Q++ + +CH R +HRDIK NIL++ RG KL DFG L + E PYT+
Sbjct: 143 CFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE----PYTDF 198
Query: 318 VITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
T Y PPE + + + VWS G +L ++
Sbjct: 199 DGTRVYSPPEWISRHQYHALPATVWSLGILLYDM 232
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 20/195 (10%)
Query: 164 FSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDF 223
F VS LV +K+ K +RE+++L + N IV F
Sbjct: 23 FKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA---------F 73
Query: 224 RKDKGSFYLVFEYMDHDLMG--LLESGMVDFNEVNNASIMRQLLDGLSYC-HKRNFLHRD 280
D G + E+MD + L ++G + + SI ++ GL+Y K +HRD
Sbjct: 74 YSD-GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI--AVIKGLTYLREKHKIMHRD 130
Query: 281 IKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAID 340
+K SNIL+N+RGE+KL DFG++ + + V T Y PE L G Y D
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQG-THYSVQSD 185
Query: 341 VWSCGCILGELFVKK 355
+WS G L E+ V +
Sbjct: 186 IWSMGLSLVEMAVGR 200
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 92/228 (40%), Gaps = 25/228 (10%)
Query: 132 MQAAAPIQSNSTNNSSRPLMEPLAAGGLSLNNFSVSLFTDE-LVALKKVRLENEKEGFPI 190
+ A P N+ L E + G FS L D LVA+K R E
Sbjct: 100 LHRAVPKDKWVLNHEDLVLGEQIGRGNFG-EVFSGRLRADNTLVAVKSCR-ETLPPDLKA 157
Query: 191 TAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGM 249
++E +IL+Q +H NIV L + T K Y+V E + D + L +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQ----------PIYIVMELVQGGDFLTFLRTEG 207
Query: 250 VDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-----L 304
++ G+ Y + +HRD+ N L+ + +K++DFG++R +
Sbjct: 208 ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267
Query: 305 YNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
Y A R +V W P L G RY DVWS G +L E F
Sbjct: 268 YAASGGLR----QVPVKWTAPEALNYG--RYSSESDVWSFGILLWETF 309
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
V E+++++ + HKNI+NL T G Y++ Y +L L +
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQD----------GPLYVIVGYASKGNLREYLRARRP 137
Query: 248 -GM---VDFNEV--------NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
GM D N V + S QL G+ Y + +HRD+ N+L+ +K
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 197
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR N D + TN + + + PE L + Y DVWS G ++ E+F
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVN 209
++E L +G + + V T + K + + + T EI I+ QL+H ++N
Sbjct: 55 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY--TVKNEISIMNQLHHPKLIN 112
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGL 268
L + DK + + L+ E++ +L + + +E + MRQ +GL
Sbjct: 113 LHDAFEDKYEMV----------LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGL 162
Query: 269 SYCHKRNFLHRDIKCSNILMNNR--GEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPP 326
+ H+ + +H DIK NI+ + VK+ DFGLA N ++ + T T + P
Sbjct: 163 KHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAP 219
Query: 327 ELLLGEERYGPAIDVWSCGCI 347
E ++ E G D+W+ G +
Sbjct: 220 E-IVDREPVGFYTDMWAIGVL 239
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNVH 98
+ FS + P A D + +L+ +P +R+T AL+ WLK H
Sbjct: 272 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH 312
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 89/196 (45%), Gaps = 22/196 (11%)
Query: 164 FSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDF 223
F VS LV +K+ K +RE+++L + N IV F
Sbjct: 26 FKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA---------F 76
Query: 224 RKDKGSFYLVFEYMDHDLMG--LLESGMVDFNEVNNASIMRQLLDGLSYC-HKRNFLHRD 280
D G + E+MD + L ++G + + SI ++ GL+Y K +HRD
Sbjct: 77 YSD-GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI--AVIKGLTYLREKHKIMHRD 133
Query: 281 IKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAI 339
+K SNIL+N+RGE+KL DFG++ E N+ + T Y PE L G Y
Sbjct: 134 VKPSNILVNSRGEIKLCDFGVSGQLIDE-----MANEFVGTRSYMSPERLQG-THYSVQS 187
Query: 340 DVWSCGCILGELFVKK 355
D+WS G L E+ V +
Sbjct: 188 DIWSMGLSLVEMAVGR 203
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 176 LKKVRLENEKEGFPITAV-REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
+KK R ++ + G + RE+ IL+++ H N++ L E+ +K+D + L+
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI----------LIL 93
Query: 235 EYMD----HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
E + D + ES E ++Q+L+G+ Y H H D+K NI++ +
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 291 RG----EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
R +K+ DFGLA + D + N T + PE ++ E G D+WS G
Sbjct: 150 RNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGV 205
Query: 347 I 347
I
Sbjct: 206 I 206
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLK 95
E FS A D + ++L DP++R+T + +L+ W+K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
Y V EY++ DLM ++ + F E ++ GL + HKR ++RD+K N++++
Sbjct: 96 YFVMEYVNGGDLMYHIQQ-VGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLD 154
Query: 290 NRGEVKLADFGLARLYNAED-RQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
+ G +K+ADFG+ + + + R + T Y PE ++ + YG ++D W+ G +L
Sbjct: 155 SEGHIKIADFGMCKEHMMDGVTTREFCG---TPDYIAPE-IIAYQPYGKSVDWWAYGVLL 210
Query: 349 GELFVKKPLF 358
E+ +P F
Sbjct: 211 YEMLAGQPPF 220
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 20/195 (10%)
Query: 164 FSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDF 223
F VS LV +K+ K +RE+++L + N IV F
Sbjct: 23 FKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA---------F 73
Query: 224 RKDKGSFYLVFEYMDHDLMG--LLESGMVDFNEVNNASIMRQLLDGLSYC-HKRNFLHRD 280
D G + E+MD + L ++G + + SI ++ GL+Y K +HRD
Sbjct: 74 YSD-GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI--AVIKGLTYLREKHKIMHRD 130
Query: 281 IKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAID 340
+K SNIL+N+RGE+KL DFG++ + + V T Y PE L G Y D
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQG-THYSVQSD 185
Query: 341 VWSCGCILGELFVKK 355
+WS G L E+ V +
Sbjct: 186 IWSMGLSLVEMAVGR 200
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 176 LKKVRLENEKEGFPITAV-REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
+KK R ++ + G + RE+ IL+++ H N++ L E+ +K+D + L+
Sbjct: 43 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI----------LIL 92
Query: 235 EYMD----HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
E + D + ES E ++Q+L+G+ Y H H D+K NI++ +
Sbjct: 93 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 148
Query: 291 RG----EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
R +K+ DFGLA + D + N T + PE ++ E G D+WS G
Sbjct: 149 RNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGV 204
Query: 347 I 347
I
Sbjct: 205 I 205
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLK 95
E FS A D + ++L DP++R+T + +L+ W+K
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 81/167 (48%), Gaps = 22/167 (13%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMG--LLESGMV 250
+RE+++L + N IV F D G + E+MD + L E+ +
Sbjct: 62 IRELQVLHECNSPYIVGFYGA---------FYSD-GEISICMEHMDGGSLDQVLKEAKRI 111
Query: 251 DFNEVNNASIMRQLLDGLSYC-HKRNFLHRDIKCSNILMNNRGEVKLADFGLA-RLYNAE 308
+ SI +L GL+Y K +HRD+K SNIL+N+RGE+KL DFG++ +L ++
Sbjct: 112 PEEILGKVSI--AVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 169
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKK 355
+ V T Y PE L G Y D+WS G L EL V +
Sbjct: 170 -----ANSFVGTRSYMAPERLQG-THYSVQSDIWSMGLSLVELAVGR 210
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 176 LKKVRLENEKEGFPITAV-REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
+KK R ++ + G + RE+ IL+++ H N++ L E+ +K+D + L+
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI----------LIL 93
Query: 235 EYMD----HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
E + D + ES E ++Q+L+G+ Y H H D+K NI++ +
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 291 RG----EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
R +K+ DFGLA + D + N T + PE ++ E G D+WS G
Sbjct: 150 RNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGV 205
Query: 347 I 347
I
Sbjct: 206 I 206
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLK 95
E FS A D + ++L DP++R+T + +L+ W+K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 176 LKKVRLENEKEGFPITAV-REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
+KK R ++ + G + RE+ IL+++ H N++ L E+ +K+D + L+
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI----------LIL 93
Query: 235 EYMD----HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
E + D + ES E ++Q+L+G+ Y H H D+K NI++ +
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 291 RG----EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
R +K+ DFGLA + D + N T + PE ++ E G D+WS G
Sbjct: 150 RNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPAFVAPE-IVNYEPLGLEADMWSIGV 205
Query: 347 I 347
I
Sbjct: 206 I 206
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLK 95
E FS A D + ++L DP++R+T + +L+ W+K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMG--LLESGMV 250
+RE+++L + N IV F D G + E+MD + L ++G +
Sbjct: 79 IRELQVLHECNSPYIVGFYGA---------FYSD-GEISICMEHMDGGSLDQVLKKAGRI 128
Query: 251 DFNEVNNASIMRQLLDGLSYC-HKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAED 309
+ SI ++ GL+Y K +HRD+K SNIL+N+RGE+KL DFG++ +
Sbjct: 129 PEQILGKVSI--AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQL 182
Query: 310 RQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKK 355
+ V T Y PE L G Y D+WS G L E+ V +
Sbjct: 183 IDSMANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR---GEVKLADFGLARLYNAE 308
F E + IM+ + + + Y H N HRD+K N+L ++ +KL DFG A+ +
Sbjct: 118 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 177
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ T T +Y PE +LG E+Y + D+WS G I+ L P F
Sbjct: 178 NS---LTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 176 LKKVRLENEKEGFPITAV-REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
+KK R ++ + G + RE+ IL+++ H N++ L E+ +K+D + L+
Sbjct: 43 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI----------LIL 92
Query: 235 EYMD----HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
E + D + ES E ++Q+L+G+ Y H H D+K NI++ +
Sbjct: 93 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 148
Query: 291 RG----EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
R +K+ DFGLA + D + N T + PE ++ E G D+WS G
Sbjct: 149 RNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGV 204
Query: 347 I 347
I
Sbjct: 205 I 205
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLK 95
E FS A D + ++L DP++R+T + +L+ W+K
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 20/195 (10%)
Query: 164 FSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDF 223
F VS LV +K+ K +RE+++L + N IV F
Sbjct: 23 FKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA---------F 73
Query: 224 RKDKGSFYLVFEYMDHDLMG--LLESGMVDFNEVNNASIMRQLLDGLSYC-HKRNFLHRD 280
D G + E+MD + L ++G + + SI ++ GL+Y K +HRD
Sbjct: 74 YSD-GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI--AVIKGLTYLREKHKIMHRD 130
Query: 281 IKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAID 340
+K SNIL+N+RGE+KL DFG++ + + V T Y PE L G Y D
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQG-THYSVQSD 185
Query: 341 VWSCGCILGELFVKK 355
+WS G L E+ V +
Sbjct: 186 IWSMGLSLVEMAVGR 200
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR---GEVKLADFGLARLYNAE 308
F E + IM+ + + + Y H N HRD+K N+L ++ +KL DFG A+ +
Sbjct: 164 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 223
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ T T +Y PE +LG E+Y + D+WS G I+ L P F
Sbjct: 224 N---SLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 176 LKKVRLENEKEGFPITAV-REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
+KK R ++ + G + RE+ IL+++ H N++ L E+ +K+D + L+
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI----------LIL 93
Query: 235 EYMD----HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
E + D + ES E ++Q+L+G+ Y H H D+K NI++ +
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 291 RG----EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
R +K+ DFGLA + D + N T + PE ++ E G D+WS G
Sbjct: 150 RNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGV 205
Query: 347 I 347
I
Sbjct: 206 I 206
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLK 95
E FS A D + ++L DP++R+T + +L+ W+K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR---GEVKLADFGLARLYNAE 308
F E + IM+ + + + Y H N HRD+K N+L ++ +KL DFG A+ +
Sbjct: 119 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 178
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ T T +Y PE +LG E+Y + D+WS G I+ L P F
Sbjct: 179 NS---LTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR---GEVKLADFGLARLYNAE 308
F E + IM+ + + + Y H N HRD+K N+L ++ +KL DFG A+ +
Sbjct: 128 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 187
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ T T +Y PE +LG E+Y + D+WS G I+ L P F
Sbjct: 188 NS---LTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR---GEVKLADFGLARLYNAE 308
F E + IM+ + + + Y H N HRD+K N+L ++ +KL DFG A+ +
Sbjct: 120 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 179
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ T T +Y PE +LG E+Y + D+WS G I+ L P F
Sbjct: 180 NS---LTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR---GEVKLADFGLARLYNAE 308
F E + IM+ + + + Y H N HRD+K N+L ++ +KL DFG A+ +
Sbjct: 112 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 171
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ T T +Y PE +LG E+Y + D+WS G I+ L P F
Sbjct: 172 NS---LTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR---GEVKLADFGLARLYNAE 308
F E + IM+ + + + Y H N HRD+K N+L ++ +KL DFG A+ +
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 173
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ T T +Y PE +LG E+Y + D+WS G I+ L P F
Sbjct: 174 N---SLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR---GEVKLADFGLARLYNAE 308
F E + IM+ + + + Y H N HRD+K N+L ++ +KL DFG A+ +
Sbjct: 158 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ T T +Y PE +LG E+Y + D+WS G I+ L P F
Sbjct: 218 N---SLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR---GEVKLADFGLARLYNAE 308
F E + IM+ + + + Y H N HRD+K N+L ++ +KL DFG A+ +
Sbjct: 113 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 172
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ T T +Y PE +LG E+Y + D+WS G I+ L P F
Sbjct: 173 NS---LTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 176 LKKVRLENEKEGFPITAV-REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
+KK R ++ + G + RE+ IL+++ H N++ L E+ +K+D + L+
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI----------LIL 93
Query: 235 EYMD----HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
E + D + ES E ++Q+L+G+ Y H H D+K NI++ +
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 291 RG----EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
R +K+ DFGLA + D + N T + PE ++ E G D+WS G
Sbjct: 150 RNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGV 205
Query: 347 I 347
I
Sbjct: 206 I 206
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLK 95
E FS A D + ++L DP++R+T + +L+ W+K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 176 LKKVRLENEKEGFPITAV-REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
+KK R ++ + G + RE+ IL+++ H N++ L E+ +K+D + L+
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI----------LIL 93
Query: 235 EYMD----HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
E + D + ES E ++Q+L+G+ Y H H D+K NI++ +
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 291 RG----EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
R +K+ DFGLA + D + N T + PE ++ E G D+WS G
Sbjct: 150 RNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGV 205
Query: 347 I 347
I
Sbjct: 206 I 206
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLK 95
E FS A D + ++L DP++R+T + +L+ W+K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 176 LKKVRLENEKEGFPITAV-REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
+KK R ++ + G + RE+ IL+++ H N++ L E+ +K+D + L+
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI----------LIL 93
Query: 235 EYMD----HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
E + D + ES E ++Q+L+G+ Y H H D+K NI++ +
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 291 RG----EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
R +K+ DFGLA + D + N T + PE ++ E G D+WS G
Sbjct: 150 RNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGV 205
Query: 347 I 347
I
Sbjct: 206 I 206
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLK 95
E FS A D + ++L DP++R+T + +L+ W+K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR---GEVKLADFGLARLYNAE 308
F E + IM+ + + + Y H N HRD+K N+L ++ +KL DFG A+ +
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 173
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ T T +Y PE +LG E+Y + D+WS G I+ L P F
Sbjct: 174 N---SLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 176 LKKVRLENEKEGFPITAV-REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
+KK R ++ + G + RE+ IL+++ H N++ L E+ +K+D + L+
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI----------LIL 93
Query: 235 EYMD----HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
E + D + ES E ++Q+L+G+ Y H H D+K NI++ +
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 291 RG----EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
R +K+ DFGLA + D + N T + PE ++ E G D+WS G
Sbjct: 150 RNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGV 205
Query: 347 I 347
I
Sbjct: 206 I 206
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLK 95
E FS A D + ++L DP++R+T + +L+ W+K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 176 LKKVRLENEKEGFPITAV-REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
+KK R ++ + G + RE+ IL+++ H N++ L E+ +K+D + L+
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI----------LIL 93
Query: 235 EYMD----HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
E + D + ES E ++Q+L+G+ Y H H D+K NI++ +
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 291 RG----EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
R +K+ DFGLA + D + N T + PE ++ E G D+WS G
Sbjct: 150 RNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGV 205
Query: 347 I 347
I
Sbjct: 206 I 206
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLK 95
E FS A D + ++L DP++R+T + +L+ W+K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 176 LKKVRLENEKEGFPITAV-REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
+KK R ++ + G + RE+ IL+++ H N++ L E+ +K+D + L+
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI----------LIL 93
Query: 235 EYMD----HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
E + D + ES E ++Q+L+G+ Y H H D+K NI++ +
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 291 RG----EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
R +K+ DFGLA + D + N T + PE ++ E G D+WS G
Sbjct: 150 RNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGV 205
Query: 347 I 347
I
Sbjct: 206 I 206
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLK 95
E FS A D + ++L DP++R+T + +L+ W+K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR---GEVKLADFGLARLYNAE 308
F E + IM+ + + + Y H N HRD+K N+L ++ +KL DFG A+ +
Sbjct: 112 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 171
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ T T +Y PE +LG E+Y + D+WS G I+ L P F
Sbjct: 172 NS---LTEPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 27/181 (14%)
Query: 176 LKKVRLENEKEGFPITAV-REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
+KK R ++ + G + RE+ IL+++ H N++ L E+ +K+D + L+
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI----------LIL 93
Query: 235 EYMD----HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
E + D + ES E ++Q+L+G+ Y H H D+K NI++ +
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149
Query: 291 RG----EVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 346
R +K+ DFGLA D + N T + PE ++ E G D+WS G
Sbjct: 150 RNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGV 205
Query: 347 I 347
I
Sbjct: 206 I 206
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLK 95
E FS A D + ++L DP++R+T + +L+ W+K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 20/195 (10%)
Query: 164 FSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDF 223
F VS LV +K+ K +RE+++L + N IV F
Sbjct: 23 FKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA---------F 73
Query: 224 RKDKGSFYLVFEYMDHDLMG--LLESGMVDFNEVNNASIMRQLLDGLSYC-HKRNFLHRD 280
D G + E+MD + L ++G + + SI ++ GL+Y K +HRD
Sbjct: 74 YSD-GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI--AVIKGLTYLREKHKIMHRD 130
Query: 281 IKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAID 340
+K SNIL+N+RGE+KL DFG++ + + V T Y PE L G Y D
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQG-THYSVQSD 185
Query: 341 VWSCGCILGELFVKK 355
+WS G L E+ V +
Sbjct: 186 IWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 20/195 (10%)
Query: 164 FSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDF 223
F VS LV +K+ K +RE+++L + N IV F
Sbjct: 23 FKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA---------F 73
Query: 224 RKDKGSFYLVFEYMDHDLMG--LLESGMVDFNEVNNASIMRQLLDGLSYC-HKRNFLHRD 280
D G + E+MD + L ++G + + SI ++ GL+Y K +HRD
Sbjct: 74 YSD-GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI--AVIKGLTYLREKHKIMHRD 130
Query: 281 IKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAID 340
+K SNIL+N+RGE+KL DFG++ + + V T Y PE L G Y D
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQG-THYSVQSD 185
Query: 341 VWSCGCILGELFVKK 355
+WS G L E+ V +
Sbjct: 186 IWSMGLSLVEMAVGR 200
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
+ E+++++ + HKNI+NL T G Y++ EY +L L++
Sbjct: 73 ISEMEMMKMIGKHKNIINLLGACTQD----------GPLYVIVEYASKGNLREYLQARRP 122
Query: 248 -GM-VDFNEVNN----------ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
G+ +N +N S Q+ G+ Y + +HRD+ N+L+ +K
Sbjct: 123 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 182
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR + D + TN + + + PE L + Y DVWS G +L E+F
Sbjct: 183 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 19/209 (9%)
Query: 146 SSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRL-ENEKEGFPITAVREIKILRQLNH 204
S ++ + +G L + L D+ VA+K +R +E F + E +++ +L+H
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDF----IEEAEVMMKLSH 61
Query: 205 KNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMG-LLESGMVDFNEVNNASIMRQ 263
+V L + +++ LVFE+M+H + L + F +
Sbjct: 62 PKLVQLYGVCLEQAPIC----------LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 111
Query: 264 LLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWY 323
+ +G++Y + + +HRD+ N L+ +K++DFG+ R + +D+ T + +
Sbjct: 112 VCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKW 170
Query: 324 RPPELLLGEERYGPAIDVWSCGCILGELF 352
PE + RY DVWS G ++ E+F
Sbjct: 171 ASPE-VFSFSRYSSKSDVWSFGVLMWEVF 198
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
+ E+++++ + HKNI+NL T G Y++ EY +L L++
Sbjct: 70 ISEMEMMKMIGKHKNIINLLGACTQD----------GPLYVIVEYASKGNLREYLQARRP 119
Query: 248 -GM-VDFNEVNN----------ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
G+ +N +N S Q+ G+ Y + +HRD+ N+L+ +K
Sbjct: 120 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 179
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR + D + TN + + + PE L + Y DVWS G +L E+F
Sbjct: 180 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
+ E+++++ + HKNI+NL T G Y++ EY +L L++
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQD----------GPLYVIVEYASKGNLREYLQAREP 130
Query: 248 -GM-VDFNEVNN----------ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
G+ +N +N S Q+ G+ Y + +HRD+ N+L+ +K
Sbjct: 131 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 190
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR + D + TN + + + PE L + Y DVWS G +L E+F
Sbjct: 191 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
+ E+++++ + HKNI+NL T G Y++ EY +L L++
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQD----------GPLYVIVEYASKGNLREYLQARRP 130
Query: 248 -GM-VDFNEVNN----------ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
G+ +N +N S Q+ G+ Y + +HRD+ N+L+ +K
Sbjct: 131 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 190
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR + D + TN + + + PE L + Y DVWS G +L E+F
Sbjct: 191 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
+ E+++++ + HKNI+NL T G Y++ EY +L L++
Sbjct: 74 ISEMEMMKMIGKHKNIINLLGACTQD----------GPLYVIVEYASKGNLREYLQARRP 123
Query: 248 -GM-VDFNEVNN----------ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
G+ +N +N S Q+ G+ Y + +HRD+ N+L+ +K
Sbjct: 124 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 183
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR + D + TN + + + PE L + Y DVWS G +L E+F
Sbjct: 184 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMG--LLESGMV 250
+RE+++L + N IV F D G + E+MD + L ++G +
Sbjct: 71 IRELQVLHECNSPYIVGFYGA---------FYSD-GEISICMEHMDGGSLDQVLKKAGRI 120
Query: 251 DFNEVNNASIMRQLLDGLSYC-HKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAED 309
+ SI ++ GL+Y K +HRD+K SNIL+N+RGE+KL DFG++ +
Sbjct: 121 PEQILGKVSI--AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQL 174
Query: 310 RQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKK 355
+ V T Y PE L G Y D+WS G L E+ V +
Sbjct: 175 IDSMANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD--LMGLLESGMVDF 252
E IL ++ H IV+L + + G YL+ EY+ M L G+ F
Sbjct: 71 ERNILEEVKHPFIVDL----------IYAFQTGGKLYLILEYLSGGELFMQLEREGI--F 118
Query: 253 NEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQR 312
E + ++ L + H++ ++RD+K NI++N++G VKL DFGL +
Sbjct: 119 MEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK---ESIHDG 175
Query: 313 PYTNKVI-TLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
T+ T+ Y PE+L+ + A+D WS G ++ ++ P F
Sbjct: 176 TVTHXFCGTIEYMAPEILM-RSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHD-LMGLLESGMVDFN 253
E I+ Q H NI+ L +VT+ + ++ E+M++ L L F
Sbjct: 67 EASIMGQFEHPNIIRLEGVVTNSMPVM----------ILTEFMENGALDSFLRLNDGQFT 116
Query: 254 EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLY--NAEDRQ 311
+ ++R + G+ Y + +++HRD+ NIL+N+ K++DFGL+R N+ D
Sbjct: 117 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 176
Query: 312 RPYT--NKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ K+ W P + ++ A D WS G ++ E+ F ++P
Sbjct: 177 ETSSLGGKIPIRWTAPEAIAF--RKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYM-DHDLMGLLESGMVDFN 253
E IL +NH +V L + +G YL+ +++ DL L S V F
Sbjct: 80 ERDILADVNHPFVVKLHYAF----------QTEGKLYLILDFLRGGDLFTRL-SKEVMFT 128
Query: 254 EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRP 313
E + + +L GL + H ++RD+K NIL++ G +KL DFGL++ A D ++
Sbjct: 129 EEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKK 186
Query: 314 YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ T+ Y PE ++ + + + D WS G ++ E+
Sbjct: 187 AYSFCGTVEYMAPE-VVNRQGHSHSADWWSYGVLMFEMLT 225
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 17/180 (9%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+K ++ EK +RE +I+ QL++ IV L + ++ L G
Sbjct: 40 VAIKVLKQGTEKADTE-EMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHK 98
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
F L+G E V N A ++ Q+ G+ Y ++NF+HRD+ N+L+ NR
Sbjct: 99 F------LVGKREEIPVS----NVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHY 148
Query: 294 VKLADFGLARLYNAEDRQRPYTNKVITLW---YRPPELLLGEERYGPAIDVWSCGCILGE 350
K++DFGL++ A+D YT + W + PE + ++ DVWS G + E
Sbjct: 149 AKISDFGLSKALGADDSY--YTARSAGKWPLKWYAPE-CINFRKFSSRSDVWSYGVTMWE 205
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
+ E+++++ + HKNI+NL T G Y++ EY +L L++
Sbjct: 122 ISEMEMMKMIGKHKNIINLLGACTQD----------GPLYVIVEYASKGNLREYLQARRP 171
Query: 248 -GM-VDFNEVNN----------ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
G+ +N +N S Q+ G+ Y + +HRD+ N+L+ +K
Sbjct: 172 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 231
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR + D + TN + + + PE L + Y DVWS G +L E+F
Sbjct: 232 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Query: 225 KDKGSFYLVFEYM-DHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKC 283
+D Y+V EYM DL+ L+ + D E +++ L H F+HRD+K
Sbjct: 144 QDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKP 201
Query: 284 SNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL---GEERYGPAID 340
N+L++ G +KLADFG N E R T V T Y PE+L G+ YG D
Sbjct: 202 DNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDGYYGRECD 260
Query: 341 VWSCGCILGELFVKKPLF 358
WS G L E+ V F
Sbjct: 261 WWSVGVFLYEMLVGDTPF 278
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Query: 225 KDKGSFYLVFEYM-DHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKC 283
+D Y+V EYM DL+ L+ + D E +++ L H F+HRD+K
Sbjct: 139 QDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKP 196
Query: 284 SNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL---GEERYGPAID 340
N+L++ G +KLADFG N E R T V T Y PE+L G+ YG D
Sbjct: 197 DNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDGYYGRECD 255
Query: 341 VWSCGCILGELFVKKPLF 358
WS G L E+ V F
Sbjct: 256 WWSVGVFLYEMLVGDTPF 273
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Query: 225 KDKGSFYLVFEYM-DHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKC 283
+D Y+V EYM DL+ L+ + D E +++ L H F+HRD+K
Sbjct: 144 QDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKP 201
Query: 284 SNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL---GEERYGPAID 340
N+L++ G +KLADFG N E R T V T Y PE+L G+ YG D
Sbjct: 202 DNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDGYYGRECD 260
Query: 341 VWSCGCILGELFVKKPLF 358
WS G L E+ V F
Sbjct: 261 WWSVGVFLYEMLVGDTPF 278
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 17/217 (7%)
Query: 151 MEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNL 210
++ L GG + + + D A+K++RL N +E +RE+K L +L H IV
Sbjct: 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRY 68
Query: 211 REIVTDK--SDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNA---SIMRQLL 265
+K ++ L K Y+ + + + +G E + I Q+
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 266 DGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRP----------YT 315
+ + + H + +HRD+K SNI VK+ DFGL + ++ ++ +T
Sbjct: 129 EAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHT 188
Query: 316 NKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+V T Y PE + G Y +D++S G IL EL
Sbjct: 189 GQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFELL 224
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 19/209 (9%)
Query: 146 SSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRL-ENEKEGFPITAVREIKILRQLNH 204
S ++ + +G L + L D+ VA+K +R +E F + E +++ +L+H
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDF----IEEAEVMMKLSH 64
Query: 205 KNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMG-LLESGMVDFNEVNNASIMRQ 263
+V L + +++ LVFE+M+H + L + F +
Sbjct: 65 PKLVQLYGVCLEQAPIC----------LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 114
Query: 264 LLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWY 323
+ +G++Y + +HRD+ N L+ +K++DFG+ R + +D+ T + +
Sbjct: 115 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKW 173
Query: 324 RPPELLLGEERYGPAIDVWSCGCILGELF 352
PE + RY DVWS G ++ E+F
Sbjct: 174 ASPE-VFSFSRYSSKSDVWSFGVLMWEVF 201
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 19/209 (9%)
Query: 146 SSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRL-ENEKEGFPITAVREIKILRQLNH 204
S ++ + +G L + L D+ VA+K +R +E F + E +++ +L+H
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDF----IEEAEVMMKLSH 59
Query: 205 KNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMG-LLESGMVDFNEVNNASIMRQ 263
+V L + +++ LVFE+M+H + L + F +
Sbjct: 60 PKLVQLYGVCLEQAPIC----------LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 109
Query: 264 LLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWY 323
+ +G++Y + +HRD+ N L+ +K++DFG+ R + +D+ T + +
Sbjct: 110 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKW 168
Query: 324 RPPELLLGEERYGPAIDVWSCGCILGELF 352
PE + RY DVWS G ++ E+F
Sbjct: 169 ASPE-VFSFSRYSSKSDVWSFGVLMWEVF 196
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 19/209 (9%)
Query: 146 SSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRL-ENEKEGFPITAVREIKILRQLNH 204
S ++ + +G L + L D+ VA+K +R +E F + E +++ +L+H
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDF----IEEAEVMMKLSH 61
Query: 205 KNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMG-LLESGMVDFNEVNNASIMRQ 263
+V L + +++ LVFE+M+H + L + F +
Sbjct: 62 PKLVQLYGVCLEQAPIC----------LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 111
Query: 264 LLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWY 323
+ +G++Y + +HRD+ N L+ +K++DFG+ R + +D+ T + +
Sbjct: 112 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKW 170
Query: 324 RPPELLLGEERYGPAIDVWSCGCILGELF 352
PE + RY DVWS G ++ E+F
Sbjct: 171 ASPE-VFSFSRYSSKSDVWSFGVLMWEVF 198
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 93/214 (43%), Gaps = 26/214 (12%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVR---EIKILRQLNHKN 206
+ E L GG + T E VA+K+ R +E P R EI+I+++LNH N
Sbjct: 19 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCR----QELSPKNRERWCLEIQIMKKLNHPN 74
Query: 207 IVNLREIVTDKSDALDFRKDKGSFYLVFEYMD-HDLMGLLES--GMVDFNEVNNASIMRQ 263
+V+ RE+ D L L EY + DL L E +++
Sbjct: 75 VVSAREV----PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 130
Query: 264 LLDGLSYCHKRNFLHRDIKCSNILMN---NRGEVKLADFGLARLYNAEDRQRPYTNKVIT 320
+ L Y H+ +HRD+K NI++ R K+ D G A+ D+ T V T
Sbjct: 131 ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGT 187
Query: 321 LWYRPPELLLGEERYGPAIDVWSCG-----CILG 349
L Y PE LL +++Y +D WS G CI G
Sbjct: 188 LQYLAPE-LLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 17/180 (9%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+K ++ EK +RE +I+ QL++ IV L + ++ L G
Sbjct: 366 VAIKVLKQGTEKADTE-EMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHK 424
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
F L+G E V N A ++ Q+ G+ Y ++NF+HR++ N+L+ NR
Sbjct: 425 F------LVGKREEIPVS----NVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHY 474
Query: 294 VKLADFGLARLYNAEDRQRPYTNKVITLW---YRPPELLLGEERYGPAIDVWSCGCILGE 350
K++DFGL++ A+D YT + W + PE + ++ DVWS G + E
Sbjct: 475 AKISDFGLSKALGADDSY--YTARSAGKWPLKWYAPE-CINFRKFSSRSDVWSYGVTMWE 531
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
+ E+++++ + HKNI+NL T G Y++ EY +L L++
Sbjct: 66 ISEMEMMKMIGKHKNIINLLGACTQD----------GPLYVIVEYASKGNLREYLQARRP 115
Query: 248 -GM-VDFNEVNN----------ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
G+ +N +N S Q+ G+ Y + +HRD+ N+L+ +K
Sbjct: 116 PGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 175
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR + D + TN + + + PE L + Y DVWS G +L E+F
Sbjct: 176 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 146 SSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNHK 205
S ++ + +G L + L D+ VA+K ++ + E + E +++ +L+H
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIKEGSMSED---DFIEEAEVMMKLSHP 82
Query: 206 NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMG-LLESGMVDFNEVNNASIMRQL 264
+V L + +++ LVFE+M+H + L + F + +
Sbjct: 83 KLVQLYGVCLEQAPIC----------LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 132
Query: 265 LDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYR 324
+G++Y + +HRD+ N L+ +K++DFG+ R + +D+ T + +
Sbjct: 133 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWA 191
Query: 325 PPELLLGEERYGPAIDVWSCGCILGELF 352
PE + RY DVWS G ++ E+F
Sbjct: 192 SPE-VFSFSRYSSKSDVWSFGVLMWEVF 218
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 93/214 (43%), Gaps = 26/214 (12%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVR---EIKILRQLNHKN 206
+ E L GG + T E VA+K+ R +E P R EI+I+++LNH N
Sbjct: 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCR----QELSPKNRERWCLEIQIMKKLNHPN 73
Query: 207 IVNLREIVTDKSDALDFRKDKGSFYLVFEYMD-HDLMGLLES--GMVDFNEVNNASIMRQ 263
+V+ RE+ D L L EY + DL L E +++
Sbjct: 74 VVSAREV----PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 129
Query: 264 LLDGLSYCHKRNFLHRDIKCSNILMN---NRGEVKLADFGLARLYNAEDRQRPYTNKVIT 320
+ L Y H+ +HRD+K NI++ R K+ D G A+ D+ T V T
Sbjct: 130 ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGT 186
Query: 321 LWYRPPELLLGEERYGPAIDVWSCG-----CILG 349
L Y PE LL +++Y +D WS G CI G
Sbjct: 187 LQYLAPE-LLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 28/178 (15%)
Query: 193 VREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLES--- 247
+ E+++++ + HKNI+NL T G Y++ EY +L L++
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQD----------GPLYVIVEYASKGNLREYLQARRP 130
Query: 248 -GM-VDFNEVNN----------ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
G+ +N +N S Q+ G+ Y + +HRD+ N+L+ +K
Sbjct: 131 PGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 190
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ADFGLAR + D + TN + + + PE L + Y DVWS G +L E+F
Sbjct: 191 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Query: 225 KDKGSFYLVFEY-MDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKC 283
+D+ YLV +Y + DL+ LL E + +++ + H+ +++HRDIK
Sbjct: 144 QDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKP 203
Query: 284 SNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEE----RYGPAI 339
N+L++ G ++LADFG N +D + V T Y PE+L E +YGP
Sbjct: 204 DNVLLDVNGHIRLADFGSCLKMN-DDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPEC 262
Query: 340 DVWSCG-CILGELFVKKPLF 358
D WS G C+ L+ + P +
Sbjct: 263 DWWSLGVCMYEMLYGETPFY 282
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Query: 225 KDKGSFYLVFEY-MDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKC 283
+D+ YLV +Y + DL+ LL E + +++ + H+ +++HRDIK
Sbjct: 160 QDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKP 219
Query: 284 SNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEE----RYGPAI 339
N+L++ G ++LADFG N +D + V T Y PE+L E +YGP
Sbjct: 220 DNVLLDVNGHIRLADFGSCLKMN-DDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPEC 278
Query: 340 DVWSCG-CILGELFVKKPLF 358
D WS G C+ L+ + P +
Sbjct: 279 DWWSLGVCMYEMLYGETPFY 298
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 89/224 (39%), Gaps = 17/224 (7%)
Query: 132 MQAAAPIQSNSTNNSSRPLMEPLAAGGLSLNNFSVSLFTDE-LVALKKVRLENEKEGFPI 190
+ A P N+ L E + G FS L D LVA+K R E
Sbjct: 100 LHRAVPKDKWVLNHEDLVLGEQIGRGNFG-EVFSGRLRADNTLVAVKSCR-ETLPPDLKA 157
Query: 191 TAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGM 249
++E +IL+Q +H NIV L + T K Y+V E + D + L +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQ----------PIYIVMELVQGGDFLTFLRTEG 207
Query: 250 VDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAE 308
++ G+ Y + +HRD+ N L+ + +K++DFG++R +
Sbjct: 208 ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+V W P L G RY DVWS G +L E F
Sbjct: 268 XAASGGLRQVPVKWTAPEALNYG--RYSSESDVWSFGILLWETF 309
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 23/189 (12%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+K++ E+E++ F + E++ L ++NH NIV L + + + GS Y V
Sbjct: 35 VAIKQIESESERKAF----IVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNV 90
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHK---RNFLHRDIKCSNILMNN 290
+ + + + S Q G++Y H + +HRD+K N+L+
Sbjct: 91 LHGAE---------PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA 141
Query: 291 RGEV-KLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILG 349
G V K+ DFG A D Q TN + + PE+ G Y DV+S G IL
Sbjct: 142 GGTVLKICDFG-----TACDIQTHMTNNKGSAAWMAPEVFEG-SNYSEKCDVFSWGIILW 195
Query: 350 ELFVKKPLF 358
E+ ++ F
Sbjct: 196 EVITRRKPF 204
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DL-MGLLESGM 249
A+ E +IL ++N + +V+L + DAL LV M+ DL + G
Sbjct: 231 ALNEKQILEKVNSRFVVSL-AYAYETKDAL---------CLVLTLMNGGDLKFHIYHMGQ 280
Query: 250 VDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAED 309
F E ++ GL H+ ++RD+K NIL+++ G ++++D GLA ++ E
Sbjct: 281 AGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEG 339
Query: 310 RQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ +V T+ Y PE ++ ERY + D W+ GC+L E+ + F
Sbjct: 340 QT--IKGRVGTVGYMAPE-VVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
E+ +LR+ H NI+ +T + A+ + +GS L L F
Sbjct: 82 EVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGS----------SLYKHLHVQETKFQM 131
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLA----RLYNAEDR 310
I RQ G+ Y H +N +HRD+K +NI ++ VK+ DFGLA R ++
Sbjct: 132 FQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191
Query: 311 QRPYTNKVITLWYRPPELLLGEER-YGPAIDVWSCGCILGELFV 353
++P T V LW P + + + + DV+S G +L EL
Sbjct: 192 EQP-TGSV--LWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT 232
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DL-MGLLESGM 249
A+ E +IL ++N + +V+L + DAL LV M+ DL + G
Sbjct: 231 ALNEKQILEKVNSRFVVSL-AYAYETKDAL---------CLVLTLMNGGDLKFHIYHMGQ 280
Query: 250 VDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAED 309
F E ++ GL H+ ++RD+K NIL+++ G ++++D GLA ++ E
Sbjct: 281 AGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEG 339
Query: 310 RQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+ +V T+ Y PE ++ ERY + D W+ GC+L E+ + F
Sbjct: 340 QT--IKGRVGTVGYMAPE-VVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EYM M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +K+ADFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIKVADFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EYM M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +K+ADFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIKVADFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRL--ENEKEGFPITAVREIKILRQLNHKNI 207
+ E L G + + T A K V E++KE T +EI+ + L H +
Sbjct: 161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE----TVRKEIQTMSVLRHPTL 216
Query: 208 VNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLD 266
VNL + D ++ + +++E+M +L + +E MRQ+
Sbjct: 217 VNLHDAFEDDNEMV----------MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCK 266
Query: 267 GLSYCHKRNFLHRDIKCSNILMNNR--GEVKLADFGLARLYNAEDRQRPYTNKVITLWYR 324
GL + H+ N++H D+K NI+ + E+KL DFGL + + + T T +
Sbjct: 267 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG---TAEFA 323
Query: 325 PPELLLGEERYGPAIDVWSCGCI 347
PE+ G+ G D+WS G +
Sbjct: 324 APEVAEGKP-VGYYTDMWSVGVL 345
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 60 FSLMPPGALDLLDKMLELDPERRITAEQALKSVWL 94
FS + D + K+L DP R+T QAL+ WL
Sbjct: 380 FSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 23/189 (12%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VA+K++ E+E++ F + E++ L ++NH NIV L + + + GS Y V
Sbjct: 34 VAIKQIESESERKAF----IVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNV 89
Query: 234 FEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHK---RNFLHRDIKCSNILMNN 290
+ + + + S Q G++Y H + +HRD+K N+L+
Sbjct: 90 LHGAE---------PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA 140
Query: 291 RGEV-KLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILG 349
G V K+ DFG A D Q TN + + PE+ G Y DV+S G IL
Sbjct: 141 GGTVLKICDFG-----TACDIQTHMTNNKGSAAWMAPEVFEG-SNYSEKCDVFSWGIILW 194
Query: 350 ELFVKKPLF 358
E+ ++ F
Sbjct: 195 EVITRRKPF 203
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRL--ENEKEGFPITAVREIKILRQLNHKNI 207
+ E L G + + T A K V E++KE T +EI+ + L H +
Sbjct: 55 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE----TVRKEIQTMSVLRHPTL 110
Query: 208 VNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLD 266
VNL + D ++ + +++E+M +L + +E MRQ+
Sbjct: 111 VNLHDAFEDDNEMV----------MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCK 160
Query: 267 GLSYCHKRNFLHRDIKCSNILMNNR--GEVKLADFGLARLYNAEDRQRPYTNKVITLWYR 324
GL + H+ N++H D+K NI+ + E+KL DFGL + + + T T +
Sbjct: 161 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG---TAEFA 217
Query: 325 PPELLLGEERYGPAIDVWSCGCI 347
PE+ G+ G D+WS G +
Sbjct: 218 APEVAEGKP-VGYYTDMWSVGVL 239
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 60 FSLMPPGALDLLDKMLELDPERRITAEQALKSVWL 94
FS + D + K+L DP R+T QAL+ WL
Sbjct: 274 FSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 258 ASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGL-ARLYNAEDRQRPYTN 316
A I R++L GLS+ H+ +HRDIK N+L+ EVKL DFG+ A+L R+ +
Sbjct: 132 AYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF-- 189
Query: 317 KVITLWYRPPELLLGEER----YGPAIDVWSCGCILGELFVKKP 356
+ T ++ PE++ +E Y D+WS G E+ P
Sbjct: 190 -IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 232
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 92/222 (41%), Gaps = 31/222 (13%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVR----EIKILRQLNHK 205
L +PL G + + D+ + V ++ KEG + R E+KIL + H
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 206 -NIVNLREIVTDKSDAL-------------DFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
N+VNL T L + + K + ++ ++ + D + L
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAEDR 310
F Q+ G+ + R +HRD+ NIL++ + VK+ DFGLAR +Y D
Sbjct: 151 F----------QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 200
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
R ++ W P + + Y DVWS G +L E+F
Sbjct: 201 VRKGDARLPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIF 240
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGM-VD 251
++E +RQ +H +IV L ++T+ V+ M+ +G L S + V
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVITENP--------------VWIIMELCTLGELRSFLQVR 104
Query: 252 FNEVNNASIM---RQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAE 308
++ AS++ QL L+Y + F+HRDI N+L+++ VKL DFGL+R
Sbjct: 105 KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 164
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ K+ W P + R+ A DVW G + E+ +
Sbjct: 165 TXXKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILM 207
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 92/222 (41%), Gaps = 31/222 (13%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVR----EIKILRQLNHK 205
L +PL G + + D+ + V ++ KEG + R E+KIL + H
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 206 -NIVNLREIVTDKSDAL-------------DFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
N+VNL T L + + K + ++ ++ + D + L
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAEDR 310
F Q+ G+ + R +HRD+ NIL++ + VK+ DFGLAR +Y D
Sbjct: 151 F----------QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDY 200
Query: 311 QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
R ++ W P + + Y DVWS G +L E+F
Sbjct: 201 VRKGDARLPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIF 240
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGM-VD 251
++E +RQ +H +IV L ++T+ V+ M+ +G L S + V
Sbjct: 87 LQEALTMRQFDHPHIVKLIGVITENP--------------VWIIMELCTLGELRSFLQVR 132
Query: 252 FNEVNNASIM---RQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAE 308
++ AS++ QL L+Y + F+HRDI N+L+++ VKL DFGL+R
Sbjct: 133 KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 192
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ K+ W P + R+ A DVW G + E+ +
Sbjct: 193 TYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILM 235
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGM-VD 251
++E +RQ +H +IV L ++T+ V+ M+ +G L S + V
Sbjct: 64 LQEALTMRQFDHPHIVKLIGVITENP--------------VWIIMELCTLGELRSFLQVR 109
Query: 252 FNEVNNASIM---RQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAE 308
++ AS++ QL L+Y + F+HRDI N+L+++ VKL DFGL+R
Sbjct: 110 KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ K+ W P + R+ A DVW G + E+ +
Sbjct: 170 TYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILM 212
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGM-VD 251
++E +RQ +H +IV L ++T+ V+ M+ +G L S + V
Sbjct: 61 LQEALTMRQFDHPHIVKLIGVITENP--------------VWIIMELCTLGELRSFLQVR 106
Query: 252 FNEVNNASIM---RQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAE 308
++ AS++ QL L+Y + F+HRDI N+L+++ VKL DFGL+R
Sbjct: 107 KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 166
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ K+ W P + R+ A DVW G + E+ +
Sbjct: 167 TYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILM 209
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGM-VD 251
++E +RQ +H +IV L ++T+ V+ M+ +G L S + V
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVITENP--------------VWIIMELCTLGELRSFLQVR 104
Query: 252 FNEVNNASIM---RQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAE 308
++ AS++ QL L+Y + F+HRDI N+L+++ VKL DFGL+R
Sbjct: 105 KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 164
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ K+ W P + R+ A DVW G + E+ +
Sbjct: 165 TYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILM 207
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVR----EIKILRQLNHK 205
L +PL G + + D+ + V ++ KEG + R E+KIL + H
Sbjct: 33 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 206 -NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNA----- 258
N+VNL T K G ++ E+ +L L S +F A
Sbjct: 93 LNVVNLLGACT---------KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLY 143
Query: 259 ----------SIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNA 307
Q+ G+ + R +HRD+ NIL++ + VK+ DFGLAR +Y
Sbjct: 144 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 203
Query: 308 EDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
D R ++ W P + + Y DVWS G +L E+F
Sbjct: 204 PDYVRKGDARLPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIF 246
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGM-VD 251
++E +RQ +H +IV L ++T+ V+ M+ +G L S + V
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVITENP--------------VWIIMELCTLGELRSFLQVR 104
Query: 252 FNEVNNASIM---RQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAE 308
++ AS++ QL L+Y + F+HRDI N+L+++ VKL DFGL+R
Sbjct: 105 KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 164
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ K+ W P + R+ A DVW G + E+ +
Sbjct: 165 TYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILM 207
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGM-VD 251
++E +RQ +H +IV L ++T+ V+ M+ +G L S + V
Sbjct: 62 LQEALTMRQFDHPHIVKLIGVITENP--------------VWIIMELCTLGELRSFLQVR 107
Query: 252 FNEVNNASIM---RQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAE 308
++ AS++ QL L+Y + F+HRDI N+L+++ VKL DFGL+R
Sbjct: 108 KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 167
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ K+ W P + R+ A DVW G + E+ +
Sbjct: 168 TYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILM 210
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGM-VD 251
++E +RQ +H +IV L ++T+ V+ M+ +G L S + V
Sbjct: 56 LQEALTMRQFDHPHIVKLIGVITENP--------------VWIIMELCTLGELRSFLQVR 101
Query: 252 FNEVNNASIM---RQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAE 308
++ AS++ QL L+Y + F+HRDI N+L+++ VKL DFGL+R
Sbjct: 102 KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 161
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ K+ W P + R+ A DVW G + E+ +
Sbjct: 162 TYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILM 204
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYM-DHDLMGLLESGMVDFN 253
E IL ++NH IV L + +G YL+ +++ DL L S V F
Sbjct: 76 ERDILVEVNHPFIVKLHYAF----------QTEGKLYLILDFLRGGDLFTRL-SKEVMFT 124
Query: 254 EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRP 313
E + + +L L + H ++RD+K NIL++ G +KL DFGL++ + D ++
Sbjct: 125 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKK 182
Query: 314 YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ T+ Y PE ++ + + D WS G ++ E+
Sbjct: 183 AYSFCGTVEYMAPE-VVNRRGHTQSADWWSFGVLMFEMLT 221
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 154 LAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLN-HKNIVNLRE 212
LA GG + + + + ALK++ L NE+E ++E+ +++L+ H NIV
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRL-LSNEEEK-NRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 213 IVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLES----GMVDFNEVNNASIMRQLLDGL 268
+ + D + F L+ E L+ L+ G + + V I Q +
Sbjct: 94 AASIGKEESD--TGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTV--LKIFYQTCRAV 149
Query: 269 SYCHKRN--FLHRDIKCSNILMNNRGEVKLADFGLARL------YNAEDRQRPYTNKVIT 320
+ H++ +HRD+K N+L++N+G +KL DFG A Y+ ++R + IT
Sbjct: 150 QHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEIT 209
Query: 321 L----WYRPPEL--LLGEERYGPAIDVWSCGCIL 348
YR PE+ L G D+W+ GCIL
Sbjct: 210 RNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 30/192 (15%)
Query: 176 LKKVRLENEKEGFPITAVREIKILRQL-NHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
LK +EKE + E+KI+ L H+NIVNL T G ++
Sbjct: 84 LKSTAHADEKEAL----MSELKIMSHLGQHENIVNLLGACTHG----------GPVLVIT 129
Query: 235 EYMDH-DLMGLL--ESGMVD----FNEVNNASIMRQLL-------DGLSYCHKRNFLHRD 280
EY + DL+ L +S +++ F N+ + R LL G+++ +N +HRD
Sbjct: 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRD 189
Query: 281 IKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAID 340
+ N+L+ N K+ DFGLAR + N + + + PE + + Y D
Sbjct: 190 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF-DCVYTVQSD 248
Query: 341 VWSCGCILGELF 352
VWS G +L E+F
Sbjct: 249 VWSYGILLWEIF 260
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
E+ +LR+ H NI+ T A+ + +GS + H L ++E+ F
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGS------SLYHHLH-IIET---KFEM 103
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY 314
+ I RQ G+ Y H ++ +HRD+K +NI ++ VK+ DFGLA + + +
Sbjct: 104 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 163
Query: 315 TNKVITLWYRPPELLLGEER--YGPAIDVWSCGCILGELFV 353
++ + PE++ +++ Y DV++ G +L EL
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 32/199 (16%)
Query: 172 ELVALKKVRLENEKEGFPITAVREIKILR-QLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
+ VA+K L+++ EG R +LR +L H N+V L +VT KD+
Sbjct: 57 QAVAIKT--LKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT---------KDQ-PL 104
Query: 231 YLVFEYMDH-DLMGLL-------ESGMVDFNEVNNASI--------MRQLLDGLSYCHKR 274
++F Y H DL L + G D + +++ + Q+ G+ Y
Sbjct: 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH 164
Query: 275 NFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITL-WYRPPELLLGEE 333
+ +H+D+ N+L+ ++ VK++D GL R A D + N ++ + W P ++ G
Sbjct: 165 HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYG-- 222
Query: 334 RYGPAIDVWSCGCILGELF 352
++ D+WS G +L E+F
Sbjct: 223 KFSIDSDIWSYGVVLWEVF 241
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 25/166 (15%)
Query: 198 ILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVN 256
I++ +H N+++L I + +GS +V YM H DL + NE +
Sbjct: 143 IMKDFSHPNVLSLLGICL---------RSEGSPLVVLPYMKHGDLRNFIR------NETH 187
Query: 257 NASIMR------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAE- 308
N ++ Q+ G+ + + F+HRD+ N +++ + VK+ADFGLAR +Y+ E
Sbjct: 188 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
D T + + + E L +++ DVWS G +L EL +
Sbjct: 248 DSVHNKTGAKLPVKWMALE-SLQTQKFTTKSDVWSFGVLLWELMTR 292
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
E+ +LR+ H NI+ T A+ + +GS + H L ++E+ F
Sbjct: 56 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGS------SLYHHLH-IIET---KFEM 105
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY 314
+ I RQ G+ Y H ++ +HRD+K +NI ++ VK+ DFGLA + + +
Sbjct: 106 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 165
Query: 315 TNKVITLWYRPPELLLGEER--YGPAIDVWSCGCILGELFV 353
++ + PE++ +++ Y DV++ G +L EL
Sbjct: 166 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 206
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 27/167 (16%)
Query: 198 ILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVN 256
I++ +H N+++L I + +GS +V YM H DL + NE +
Sbjct: 83 IMKDFSHPNVLSLLGICL---------RSEGSPLVVLPYMKHGDLRNFIR------NETH 127
Query: 257 NASIMR------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAE- 308
N ++ Q+ G+ Y + F+HRD+ N +++ + VK+ADFGLAR +Y+ E
Sbjct: 128 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEX 187
Query: 309 -DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
K+ W L +++ DVWS G +L EL +
Sbjct: 188 XSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTR 232
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
E+ +LR+ H NI+ T A+ + +GS + H L ++E+ F
Sbjct: 59 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGS------SLYHHLH-IIET---KFEM 108
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY 314
+ I RQ G+ Y H ++ +HRD+K +NI ++ VK+ DFGLA + + +
Sbjct: 109 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 315 TNKVITLWYRPPELLLGEER--YGPAIDVWSCGCILGELFV 353
++ + PE++ +++ Y DV++ G +L EL
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 27/167 (16%)
Query: 198 ILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVN 256
I++ +H N+++L I + +GS +V YM H DL + NE +
Sbjct: 103 IMKDFSHPNVLSLLGICL---------RSEGSPLVVLPYMKHGDLRNFIR------NETH 147
Query: 257 NASIMR------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAE- 308
N ++ Q+ G+ Y + F+HRD+ N +++ + VK+ADFGLAR +Y+ E
Sbjct: 148 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 207
Query: 309 -DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
K+ W L +++ DVWS G +L EL +
Sbjct: 208 YSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTR 252
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
E+ +LR+ H NI+ T A+ + +GS + H L ++E+ F
Sbjct: 59 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGS------SLYHHLH-IIET---KFEM 108
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY 314
+ I RQ G+ Y H ++ +HRD+K +NI ++ VK+ DFGLA + + +
Sbjct: 109 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 315 TNKVITLWYRPPELLLGEER--YGPAIDVWSCGCILGELFV 353
++ + PE++ +++ Y DV++ G +L EL
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
+ V E+++ DLM ++ F+E +++ L + H + ++RD+K N+L++
Sbjct: 100 FFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLD 158
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTNKVITLW------YRPPELLLGEERYGPAIDVWS 343
+ G KLADFG+ + N V T Y PE +L E YGPA+D W+
Sbjct: 159 HEGHCKLADFGMCK--------EGICNGVTTATFCGTPDYIAPE-ILQEMLYGPAVDWWA 209
Query: 344 CGCILGELFVKKPLF 358
G +L E+ F
Sbjct: 210 MGVLLYEMLCGHAPF 224
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Query: 244 LLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR---GEVKLADFG 300
+ + G F E + I + + + + Y H N HRD+K N+L ++ +KL DFG
Sbjct: 150 IQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG 209
Query: 301 LARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
A+ + + T T +Y PE +LG E+Y + D WS G I L P F
Sbjct: 210 FAKETTSHN---SLTTPCYTPYYVAPE-VLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
E+ +LR+ H NI+ T A+ + +GS + H L ++E+ F
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGS------SLYHHLH-IIET---KFEM 103
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY 314
+ I RQ G+ Y H ++ +HRD+K +NI ++ VK+ DFGLA + + +
Sbjct: 104 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 163
Query: 315 TNKVITLWYRPPELLLGEER--YGPAIDVWSCGCILGELFV 353
++ + PE++ +++ Y DV++ G +L EL
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +K+ADFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIKVADFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 29/223 (13%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVR----EIKILRQLNHK 205
L +PL G + + D+ + V ++ KEG + R E+KIL + H
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 206 -NIVNLREIVTDKSDAL-------------DFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
N+VNL T L + + K + ++ ++ DL D
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-------D 143
Query: 252 FNEVNNASIMR-QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAED 309
F + + Q+ G+ + R +HRD+ NIL++ + VK+ DFGLAR +Y D
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
Query: 310 RQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
R ++ W P + + Y DVWS G +L E+F
Sbjct: 204 XVRKGDARLPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIF 244
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 32/199 (16%)
Query: 172 ELVALKKVRLENEKEGFPITAVREIKILR-QLNHKNIVNLREIVTDKSDALDFRKDKGSF 230
+ VA+K L+++ EG R +LR +L H N+V L +VT KD+
Sbjct: 40 QAVAIKT--LKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT---------KDQ-PL 87
Query: 231 YLVFEYMDH-DLMGLL-------ESGMVDFNEVNNASI--------MRQLLDGLSYCHKR 274
++F Y H DL L + G D + +++ + Q+ G+ Y
Sbjct: 88 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH 147
Query: 275 NFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITL-WYRPPELLLGEE 333
+ +H+D+ N+L+ ++ VK++D GL R A D + N ++ + W P ++ G
Sbjct: 148 HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYG-- 205
Query: 334 RYGPAIDVWSCGCILGELF 352
++ D+WS G +L E+F
Sbjct: 206 KFSIDSDIWSYGVVLWEVF 224
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 27/167 (16%)
Query: 198 ILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVN 256
I++ +H N+++L I + +GS +V YM H DL + NE +
Sbjct: 76 IMKDFSHPNVLSLLGICL---------RSEGSPLVVLPYMKHGDLRNFIR------NETH 120
Query: 257 NASIMR------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAE- 308
N ++ Q+ G+ Y + F+HRD+ N +++ + VK+ADFGLAR +Y+ E
Sbjct: 121 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 180
Query: 309 -DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
K+ W L +++ DVWS G +L EL +
Sbjct: 181 YSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTR 225
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 27/167 (16%)
Query: 198 ILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVN 256
I++ +H N+++L I + +GS +V YM H DL + NE +
Sbjct: 102 IMKDFSHPNVLSLLGICL---------RSEGSPLVVLPYMKHGDLRNFIR------NETH 146
Query: 257 NASIMR------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAE- 308
N ++ Q+ G+ Y + F+HRD+ N +++ + VK+ADFGLAR +Y+ E
Sbjct: 147 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 206
Query: 309 -DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
K+ W L +++ DVWS G +L EL +
Sbjct: 207 YSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTR 251
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 172 ELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
+L A+K ++ K + E IL ++NH IV L + +G Y
Sbjct: 53 QLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAF----------QTEGKLY 102
Query: 232 LVFEYM-DHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
L+ +++ DL L S V F E + + +L L + H ++RD+K NIL++
Sbjct: 103 LILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE 161
Query: 291 RGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGE 350
G +KL DFGL++ + D ++ + T+ Y PE ++ + + D WS G ++ E
Sbjct: 162 EGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPE-VVNRRGHTQSADWWSFGVLMFE 218
Query: 351 LFV 353
+
Sbjct: 219 MLT 221
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 172 ELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
+L A+K ++ K + E IL ++NH IV L + +G Y
Sbjct: 54 QLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAF----------QTEGKLY 103
Query: 232 LVFEYM-DHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
L+ +++ DL L S V F E + + +L L + H ++RD+K NIL++
Sbjct: 104 LILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE 162
Query: 291 RGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGE 350
G +KL DFGL++ + D ++ + T+ Y PE ++ + + D WS G ++ E
Sbjct: 163 EGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPE-VVNRRGHTQSADWWSFGVLMFE 219
Query: 351 LFV 353
+
Sbjct: 220 MLT 222
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 25/166 (15%)
Query: 198 ILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVN 256
I++ +H N+++L I + +GS +V YM H DL + NE +
Sbjct: 84 IMKDFSHPNVLSLLGICL---------RSEGSPLVVLPYMKHGDLRNFIR------NETH 128
Query: 257 NASIMR------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAE- 308
N ++ Q+ G+ + + F+HRD+ N +++ + VK+ADFGLAR +Y+ E
Sbjct: 129 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
D T + + + E L +++ DVWS G +L EL +
Sbjct: 189 DSVHNKTGAKLPVKWMALE-SLQTQKFTTKSDVWSFGVLLWELMTR 233
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 25/166 (15%)
Query: 198 ILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVN 256
I++ +H N+++L I + +GS +V YM H DL + NE +
Sbjct: 89 IMKDFSHPNVLSLLGICL---------RSEGSPLVVLPYMKHGDLRNFIR------NETH 133
Query: 257 NASIMR------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAE- 308
N ++ Q+ G+ + + F+HRD+ N +++ + VK+ADFGLAR +Y+ E
Sbjct: 134 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 193
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
D T + + + E L +++ DVWS G +L EL +
Sbjct: 194 DSVHNKTGAKLPVKWMALE-SLQTQKFTTKSDVWSFGVLLWELMTR 238
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 27/167 (16%)
Query: 198 ILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVN 256
I++ +H N+++L I + +GS +V YM H DL + NE +
Sbjct: 81 IMKDFSHPNVLSLLGICL---------RSEGSPLVVLPYMKHGDLRNFIR------NETH 125
Query: 257 NASIMR------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAE- 308
N ++ Q+ G+ Y + F+HRD+ N +++ + VK+ADFGLAR +Y+ E
Sbjct: 126 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 185
Query: 309 -DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
K+ W L +++ DVWS G +L EL +
Sbjct: 186 YSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTR 230
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 29/223 (13%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVR----EIKILRQLNHK 205
L +PL G + + D+ + V ++ KEG + R E+KIL + H
Sbjct: 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 127
Query: 206 -NIVNLREIVTDKSDAL-------------DFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
N+VNL T L + + K + ++ ++ DL D
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-------D 180
Query: 252 FNEVNNASIMR-QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAED 309
F + + Q+ G+ + R +HRD+ NIL++ + VK+ DFGLAR +Y D
Sbjct: 181 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 240
Query: 310 RQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
R ++ W P + + Y DVWS G +L E+F
Sbjct: 241 YVRKGDARLPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIF 281
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 27/167 (16%)
Query: 198 ILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVN 256
I++ +H N+++L I + +GS +V YM H DL + NE +
Sbjct: 82 IMKDFSHPNVLSLLGICL---------RSEGSPLVVLPYMKHGDLRNFIR------NETH 126
Query: 257 NASIMR------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAE- 308
N ++ Q+ G+ Y + F+HRD+ N +++ + VK+ADFGLAR +Y+ E
Sbjct: 127 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 186
Query: 309 -DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
K+ W L +++ DVWS G +L EL +
Sbjct: 187 YSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTR 231
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 27/167 (16%)
Query: 198 ILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVN 256
I++ +H N+++L I + +GS +V YM H DL + NE +
Sbjct: 84 IMKDFSHPNVLSLLGICL---------RSEGSPLVVLPYMKHGDLRNFIR------NETH 128
Query: 257 NASIMR------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAE- 308
N ++ Q+ G+ Y + F+HRD+ N +++ + VK+ADFGLAR +Y+ E
Sbjct: 129 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 188
Query: 309 -DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
K+ W L +++ DVWS G +L EL +
Sbjct: 189 YSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTR 233
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 15/216 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVR----EIKILRQLNHK 205
L +PL G + + D+ + V ++ KEG + R E+KIL + H
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 206 -NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLL------ESGMVDFNEVNNA 258
N+VNL T L + F + Y+ + E DF + +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 259 SIMR-QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAEDRQRPYTN 316
Q+ G+ + R +HRD+ NIL++ + VK+ DFGLAR +Y D R
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 317 KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
++ W P + + Y DVWS G +L E+F
Sbjct: 202 RLPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIF 235
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 25/166 (15%)
Query: 198 ILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVN 256
I++ +H N+++L I + +GS +V YM H DL + NE +
Sbjct: 82 IMKDFSHPNVLSLLGICL---------RSEGSPLVVLPYMKHGDLRNFIR------NETH 126
Query: 257 NASIMR------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAE- 308
N ++ Q+ G+ + + F+HRD+ N +++ + VK+ADFGLAR +Y+ E
Sbjct: 127 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 186
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
D T + + + E L +++ DVWS G +L EL +
Sbjct: 187 DSVHNKTGAKLPVKWMALE-SLQTQKFTTKSDVWSFGVLLWELMTR 231
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 25/166 (15%)
Query: 198 ILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVN 256
I++ +H N+++L I + +GS +V YM H DL + NE +
Sbjct: 84 IMKDFSHPNVLSLLGICL---------RSEGSPLVVLPYMKHGDLRNFIR------NETH 128
Query: 257 NASIMR------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAE- 308
N ++ Q+ G+ + + F+HRD+ N +++ + VK+ADFGLAR +Y+ E
Sbjct: 129 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
D T + + + E L +++ DVWS G +L EL +
Sbjct: 189 DSVHNKTGAKLPVKWMALE-SLQTQKFTTKSDVWSFGVLLWELMTR 233
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 193 VREIKILRQLNHKNIVNLREIV-TDKSDALDFRKDKGSFY-LVFEYMDHDLMGLLESGMV 250
+RE+ + L+H+N++ L +V T + GS + ++ H L+G L V
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV 128
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
Q+ +G+ Y + F+HRD+ N+L+ R VK+ DFGL R D
Sbjct: 129 ------------QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 176
Query: 311 QRPYTN--KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
KV W P L + A D W G L E+F
Sbjct: 177 HXVMQEHRKVPFAWCAPES--LKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 15/216 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVR----EIKILRQLNHK 205
L +PL G + + D+ + V ++ KEG + R E+KIL + H
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 206 -NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLL------ESGMVDFNEVNNA 258
N+VNL T L + F + Y+ + E DF + +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 259 SIMR-QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAEDRQRPYTN 316
Q+ G+ + R +HRD+ NIL++ + VK+ DFGLAR +Y D R
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 317 KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
++ W P + + Y DVWS G +L E+F
Sbjct: 202 RLPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIF 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 27/167 (16%)
Query: 198 ILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVN 256
I++ +H N+++L I + +GS +V YM H DL + NE +
Sbjct: 84 IMKDFSHPNVLSLLGICL---------RSEGSPLVVLPYMKHGDLRNFIR------NETH 128
Query: 257 NASIMR------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAE- 308
N ++ Q+ G+ Y + F+HRD+ N +++ + VK+ADFGLAR +Y+ E
Sbjct: 129 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 188
Query: 309 -DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
K+ W L +++ DVWS G +L EL +
Sbjct: 189 YSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTR 233
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 29/223 (13%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVR----EIKILRQLNHK 205
L +PL G + + D+ + V ++ KEG + R E+KIL + H
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 206 -NIVNLREIVTDKSDAL-------------DFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
N+VNL T L + + K + ++ ++ DL D
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-------D 143
Query: 252 FNEVNNASIMR-QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAED 309
F + + Q+ G+ + R +HRD+ NIL++ + VK+ DFGLAR +Y D
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
Query: 310 RQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
R ++ W P + + Y DVWS G +L E+F
Sbjct: 204 YVRKGDARLPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIF 244
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 19/209 (9%)
Query: 146 SSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRL-ENEKEGFPITAVREIKILRQLNH 204
S ++ + +G L + L D+ VA+K +R +E F + E +++ +L+H
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDF----IEEAEVMMKLSH 62
Query: 205 KNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMG-LLESGMVDFNEVNNASIMRQ 263
+V L + +++ LV E+M+H + L + F +
Sbjct: 63 PKLVQLYGVCLEQAPIC----------LVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 112
Query: 264 LLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWY 323
+ +G++Y + +HRD+ N L+ +K++DFG+ R + +D+ T + +
Sbjct: 113 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKW 171
Query: 324 RPPELLLGEERYGPAIDVWSCGCILGELF 352
PE + RY DVWS G ++ E+F
Sbjct: 172 ASPE-VFSFSRYSSKSDVWSFGVLMWEVF 199
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 25/166 (15%)
Query: 198 ILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVN 256
I++ +H N+++L I + +GS +V YM H DL + NE +
Sbjct: 85 IMKDFSHPNVLSLLGICL---------RSEGSPLVVLPYMKHGDLRNFIR------NETH 129
Query: 257 NASIMR------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAE- 308
N ++ Q+ G+ + + F+HRD+ N +++ + VK+ADFGLAR +Y+ E
Sbjct: 130 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 189
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
D T + + + E L +++ DVWS G +L EL +
Sbjct: 190 DSVHNKTGAKLPVKWMALE-SLQTQKFTTKSDVWSFGVLLWELMTR 234
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 80/185 (43%), Gaps = 21/185 (11%)
Query: 177 KKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEY 236
K L+N KE F AV I++ L+H +IV L I+ ++ +++ E
Sbjct: 62 KDCTLDN-KEKFMSEAV----IMKNLDHPHIVKLIGIIEEEPT-----------WIIMEL 105
Query: 237 MDHDLMG-LLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
+ +G LE + Q+ ++Y N +HRDI NIL+ + VK
Sbjct: 106 YPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVK 165
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL--FV 353
L DFGL+R ED + ++ W P + R+ A DVW + E+ F
Sbjct: 166 LGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF--RRFTTASDVWMFAVCMWEILSFG 223
Query: 354 KKPLF 358
K+P F
Sbjct: 224 KQPFF 228
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLL--ESGMV 250
+RE+ I+++L H NIV VT + +V EY+ + L +SG
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPN----------LSIVTEYLSRGSLYRLLHKSGAR 131
Query: 251 D-FNEVNNASIMRQLLDGLSYCHKRN--FLHRDIKCSNILMNNRGEVKLADFGLARLYNA 307
+ +E S+ + G++Y H RN +HRD+K N+L++ + VK+ DFGL+RL A
Sbjct: 132 EQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-KA 190
Query: 308 EDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
W P +L +E DV+S G IL EL
Sbjct: 191 SXFLXSKXAAGTPEWMAPE--VLRDEPSNEKSDVYSFGVILWEL 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 27/167 (16%)
Query: 198 ILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVN 256
I++ +H N+++L I + +GS +V YM H DL + NE +
Sbjct: 83 IMKDFSHPNVLSLLGICL---------RSEGSPLVVLPYMKHGDLRNFIR------NETH 127
Query: 257 NASIMR------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAE- 308
N ++ Q+ G+ Y + F+HRD+ N +++ + VK+ADFGLAR +Y+ E
Sbjct: 128 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 187
Query: 309 -DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
K+ W L +++ DVWS G +L EL +
Sbjct: 188 YSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTR 232
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 27/167 (16%)
Query: 198 ILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVN 256
I++ +H N+++L I + +GS +V YM H DL + NE +
Sbjct: 79 IMKDFSHPNVLSLLGICL---------RSEGSPLVVLPYMKHGDLRNFIR------NETH 123
Query: 257 NASIMR------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAE- 308
N ++ Q+ G+ Y + F+HRD+ N +++ + VK+ADFGLAR +Y+ E
Sbjct: 124 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183
Query: 309 -DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
K+ W L +++ DVWS G +L EL +
Sbjct: 184 YSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTR 228
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
E+ +LR+ H NI+ T A+ + +GS + H L ++E+ F
Sbjct: 81 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGS------SLYHHLH-IIET---KFEM 130
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY 314
+ I RQ G+ Y H ++ +HRD+K +NI ++ VK+ DFGLA + + +
Sbjct: 131 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 190
Query: 315 TNKVITLWYRPPELLLGEER--YGPAIDVWSCGCILGELFV 353
++ + PE++ +++ Y DV++ G +L EL
Sbjct: 191 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 231
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
E+ +LR+ H NI+ T A+ + +GS + H L ++E+ F
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGS------SLYHHLH-IIET---KFEM 131
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY 314
+ I RQ G+ Y H ++ +HRD+K +NI ++ VK+ DFGLA + + +
Sbjct: 132 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 191
Query: 315 TNKVITLWYRPPELLLGEER--YGPAIDVWSCGCILGELFV 353
++ + PE++ +++ Y DV++ G +L EL
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
E+ +LR+ H NI+ T A+ + +GS L L + F
Sbjct: 58 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGS----------SLYHHLHASETKFEM 107
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY 314
I RQ G+ Y H ++ +HRD+K +NI ++ VK+ DFGLA + + +
Sbjct: 108 KKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQF 167
Query: 315 TNKVITLWYRPPELLLGEER--YGPAIDVWSCGCILGELFV 353
++ + PE++ ++ Y DV++ G +L EL
Sbjct: 168 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 208
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 23/195 (11%)
Query: 170 TDELVALKKVRLE--NEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDK 227
TD + A+K V+ E N+ E + + NH +V L +S
Sbjct: 33 TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--------- 83
Query: 228 GSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
+ V EY++ DLM ++ E + ++ L+Y H+R ++RD+K N+
Sbjct: 84 -RLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNV 141
Query: 287 LMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI---TLWYRPPELLLGEERYGPAIDVWS 343
L+++ G +KL D+G+ + + RP T Y PE+L GE+ YG ++D W+
Sbjct: 142 LLDSEGHIKLTDYGMCK-----EGLRPGDTTSXFCGTPNYIAPEILRGED-YGFSVDWWA 195
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ + F
Sbjct: 196 LGVLMFEMMAGRSPF 210
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E + +++ GL + H R ++RD+K +NIL++ G V+++D GLA ++ ++
Sbjct: 288 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS---KK 344
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+P+ + V T Y PE+L Y + D +S GC+L +L
Sbjct: 345 KPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 384
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGM-VD 251
++E +RQ +H +IV L ++T+ V+ M+ +G L S + V
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVITENP--------------VWIIMELCTLGELRSFLQVR 484
Query: 252 FNEVNNASIM---RQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAE 308
++ AS++ QL L+Y + F+HRDI N+L+++ VKL DFGL+R
Sbjct: 485 KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ K+ W P + R+ A DVW G + E+ +
Sbjct: 545 TYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILM 587
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E + +++ GL + H R ++RD+K +NIL++ G V+++D GLA ++ ++
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS---KK 345
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+P+ + V T Y PE+L Y + D +S GC+L +L
Sbjct: 346 KPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E + +++ GL + H R ++RD+K +NIL++ G V+++D GLA ++ ++
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS---KK 345
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+P+ + V T Y PE+L Y + D +S GC+L +L
Sbjct: 346 KPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 193 VREIKILRQLNHKNIVNLREIV-TDKSDALDFRKDKGSFY-LVFEYMDHDLMGLLESGMV 250
+RE+ + L+H+N++ L +V T + GS + ++ H L+G L V
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV 118
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
Q+ +G+ Y + F+HRD+ N+L+ R VK+ DFGL R D
Sbjct: 119 ------------QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 166
Query: 311 QRPYTN--KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
KV W P L + A D W G L E+F
Sbjct: 167 HXVMQEHRKVPFAWCAPES--LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY M + F+E + Q++ Y H + ++RD+K
Sbjct: 112 KDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +K+ADFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 172 NLLIDQQGYIKVADFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 224
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 225 LGVLIYEMAAGYPPF 239
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F+E + +++ GL + H R ++RD+K +NIL++ G V+++D GLA ++ ++
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS---KK 345
Query: 312 RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+P+ + V T Y PE+L Y + D +S GC+L +L
Sbjct: 346 KPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 193 VREIKILRQLNHKNIVNLREIV-TDKSDALDFRKDKGSFY-LVFEYMDHDLMGLLESGMV 250
+RE+ + L+H+N++ L +V T + GS + ++ H L+G L V
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV 128
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
Q+ +G+ Y + F+HRD+ N+L+ R VK+ DFGL R D
Sbjct: 129 ------------QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 176
Query: 311 QRPYTN--KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
KV W P L + A D W G L E+F
Sbjct: 177 HYVMQEHRKVPFAWCAPES--LKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGM-VD 251
++E +RQ +H +IV L ++T+ V+ M+ +G L S + V
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVITENP--------------VWIIMELCTLGELRSFLQVR 104
Query: 252 FNEVNNASIM---RQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAE 308
++ AS++ QL L+Y + F+HRDI N+L++ VKL DFGL+R
Sbjct: 105 KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS 164
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ K+ W P + R+ A DVW G + E+ +
Sbjct: 165 TYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILM 207
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 193 VREIKILRQLNHKNIVNLREIV-TDKSDALDFRKDKGSFY-LVFEYMDHDLMGLLESGMV 250
+RE+ + L+H+N++ L +V T + GS + ++ H L+G L V
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV 122
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
Q+ +G+ Y + F+HRD+ N+L+ R VK+ DFGL R D
Sbjct: 123 ------------QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 170
Query: 311 QRPYTN--KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
KV W P L + A D W G L E+F
Sbjct: 171 HYVMQEHRKVPFAWCAPES--LKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 91/221 (41%), Gaps = 27/221 (12%)
Query: 144 NNSSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLN 203
+N ++ L GG S + L ALK++ +++ A RE + R N
Sbjct: 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQD--REEAQREADMHRLFN 84
Query: 204 HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQ 263
H NI+ L + L R K +L+ + G L + + + N Q
Sbjct: 85 HPNILRL------VAYCLRERGAKHEAWLLLPFFKR---GTLWNEIERLKDKGNFLTEDQ 135
Query: 264 LL-------DGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFG---LARLYNAEDRQ-- 311
+L GL H + + HRD+K +NIL+ + G+ L D G A ++ RQ
Sbjct: 136 ILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQAL 195
Query: 312 --RPYTNKVITLWYRPPELLLGEER--YGPAIDVWSCGCIL 348
+ + + T+ YR PEL + DVWS GC+L
Sbjct: 196 TLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVL 236
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 193 VREIKILRQL-NHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMV 250
+ E+K++ QL +H+NIVNL T G YL+FEY + DL+ L S
Sbjct: 96 MSELKMMTQLGSHENIVNLLGACTLS----------GPIYLIFEYCCYGDLLNYLRSKRE 145
Query: 251 DFNE----------------------VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM 288
F+E + Q+ G+ + ++ +HRD+ N+L+
Sbjct: 146 KFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV 205
Query: 289 NNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
+ VK+ DFGLAR ++ N + + + PE L E Y DVWS G +L
Sbjct: 206 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF-EGIYTIKSDVWSYGILL 264
Query: 349 GELF 352
E+F
Sbjct: 265 WEIF 268
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 80/185 (43%), Gaps = 21/185 (11%)
Query: 177 KKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEY 236
K L+N KE F AV I++ L+H +IV L I+ ++ +++ E
Sbjct: 50 KDCTLDN-KEKFMSEAV----IMKNLDHPHIVKLIGIIEEEPT-----------WIIMEL 93
Query: 237 MDHDLMG-LLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
+ +G LE + Q+ ++Y N +HRDI NIL+ + VK
Sbjct: 94 YPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVK 153
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL--FV 353
L DFGL+R ED + ++ W P + R+ A DVW + E+ F
Sbjct: 154 LGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF--RRFTTASDVWMFAVCMWEILSFG 211
Query: 354 KKPLF 358
K+P F
Sbjct: 212 KQPFF 216
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 267 GLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI---TLWY 323
L+Y H+R ++RD+K N+L+++ G +KL D+G+ + + RP T Y
Sbjct: 165 ALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-----EGLRPGDTTSTFCGTPNY 219
Query: 324 RPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
PE+L GE+ YG ++D W+ G ++ E+ + F
Sbjct: 220 IAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 23/195 (11%)
Query: 170 TDELVALKKVRLE--NEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDK 227
TD + A+K V+ E N+ E + + NH +V L +S
Sbjct: 29 TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--------- 79
Query: 228 GSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
+ V EY++ DLM ++ E + ++ L+Y H+R ++RD+K N+
Sbjct: 80 -RLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNV 137
Query: 287 LMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI---TLWYRPPELLLGEERYGPAIDVWS 343
L+++ G +KL D+G+ + + RP T Y PE+L GE+ YG ++D W+
Sbjct: 138 LLDSEGHIKLTDYGMCK-----EGLRPGDTTSXFCGTPNYIAPEILRGED-YGFSVDWWA 191
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ + F
Sbjct: 192 LGVLMFEMMAGRSPF 206
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 23/195 (11%)
Query: 170 TDELVALKKVRLE--NEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDK 227
TD + A+K V+ E N+ E + + NH +V L +S
Sbjct: 44 TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--------- 94
Query: 228 GSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
+ V EY++ DLM ++ E + ++ L+Y H+R ++RD+K N+
Sbjct: 95 -RLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNV 152
Query: 287 LMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI---TLWYRPPELLLGEERYGPAIDVWS 343
L+++ G +KL D+G+ + + RP T Y PE+L GE+ YG ++D W+
Sbjct: 153 LLDSEGHIKLTDYGMCK-----EGLRPGDTTSXFCGTPNYIAPEILRGED-YGFSVDWWA 206
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ + F
Sbjct: 207 LGVLMFEMMAGRSPF 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 80/185 (43%), Gaps = 21/185 (11%)
Query: 177 KKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEY 236
K L+N KE F AV I++ L+H +IV L I+ ++ +++ E
Sbjct: 46 KDCTLDN-KEKFMSEAV----IMKNLDHPHIVKLIGIIEEEPT-----------WIIMEL 89
Query: 237 MDHDLMG-LLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVK 295
+ +G LE + Q+ ++Y N +HRDI NIL+ + VK
Sbjct: 90 YPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVK 149
Query: 296 LADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL--FV 353
L DFGL+R ED + ++ W P + R+ A DVW + E+ F
Sbjct: 150 LGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF--RRFTTASDVWMFAVCMWEILSFG 207
Query: 354 KKPLF 358
K+P F
Sbjct: 208 KQPFF 212
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 193 VREIKILRQLNHKNIVNLREIV-TDKSDALDFRKDKGSFY-LVFEYMDHDLMGLLESGMV 250
+RE+ + L+H+N++ L +V T + GS + ++ H L+G L V
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV 122
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
Q+ +G+ Y + F+HRD+ N+L+ R VK+ DFGL R D
Sbjct: 123 ------------QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 170
Query: 311 QRPYTN--KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
KV W P L + A D W G L E+F
Sbjct: 171 HYVMQEHRKVPFAWCAPES--LKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 193 VREIKILRQLNHKNIVNLREIV-TDKSDALDFRKDKGSFY-LVFEYMDHDLMGLLESGMV 250
+RE+ + L+H+N++ L +V T + GS + ++ H L+G L V
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV 118
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
Q+ +G+ Y + F+HRD+ N+L+ R VK+ DFGL R D
Sbjct: 119 ------------QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 166
Query: 311 QRPYTN--KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
KV W P L + A D W G L E+F
Sbjct: 167 HYVMQEHRKVPFAWCAPES--LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 18/164 (10%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLL--ESGMV 250
+RE+ I+++L H NIV VT + +V EY+ + L +SG
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPN----------LSIVTEYLSRGSLYRLLHKSGAR 131
Query: 251 D-FNEVNNASIMRQLLDGLSYCHKRN--FLHRDIKCSNILMNNRGEVKLADFGLARLYNA 307
+ +E S+ + G++Y H RN +HR++K N+L++ + VK+ DFGL+RL A
Sbjct: 132 EQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL-KA 190
Query: 308 EDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
+ W P +L +E DV+S G IL EL
Sbjct: 191 STFLSSKSAAGTPEWMAPE--VLRDEPSNEKSDVYSFGVILWEL 232
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 193 VREIKILRQLNHKNIVNLREIV-TDKSDALDFRKDKGSFY-LVFEYMDHDLMGLLESGMV 250
+RE+ + L+H+N++ L +V T + GS + ++ H L+G L V
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV 118
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDR 310
Q+ +G+ Y + F+HRD+ N+L+ R VK+ DFGL R D
Sbjct: 119 ------------QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 166
Query: 311 QRPYTN--KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
KV W P L + A D W G L E+F
Sbjct: 167 HYVMQEHRKVPFAWCAPES--LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 175 ALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
+L ++ + E F +RE ++R LNH N++ L I+ +G +++
Sbjct: 56 SLSRITEMQQVEAF----LREGLLMRGLNHPNVLALIGIMLPP---------EGLPHVLL 102
Query: 235 EYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGE 293
YM H DL+ + S + + S Q+ G+ Y ++ F+HRD+ N +++
Sbjct: 103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFT 162
Query: 294 VKLADFGLARLYNAEDR-----QRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
VK+ADFGLAR + DR Q+ ++ W L R+ DVWS G +L
Sbjct: 163 VKVADFGLAR--DILDREYYSVQQHRHARLPVKWTALES--LQTYRFTTKSDVWSFGVLL 218
Query: 349 GELFVK 354
EL +
Sbjct: 219 WELLTR 224
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAEDRQRPYTNKVITL 321
Q+ G+ + R +HRD+ NIL++ VK+ DFGLAR +Y D R ++
Sbjct: 207 QVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLK 266
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGELF 352
W P + ++ Y DVWS G +L E+F
Sbjct: 267 WMAPESIF--DKIYSTKSDVWSYGVLLWEIF 295
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGM-VD 251
++E +RQ +H +IV L ++T+ V+ M+ +G L S + V
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVITENP--------------VWIIMELCTLGELRSFLQVR 484
Query: 252 FNEVNNASIM---RQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAE 308
++ AS++ QL L+Y + F+HRDI N+L++ VKL DFGL+R
Sbjct: 485 KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS 544
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
+ K+ W P + R+ A DVW G + E+ +
Sbjct: 545 TYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILM 587
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 30/192 (15%)
Query: 176 LKKVRLENEKEGFPITAVREIKILRQL-NHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
LK +EKE + E+KI+ L H+NIVNL T G ++
Sbjct: 84 LKSTAHADEKEAL----MSELKIMSHLGQHENIVNLLGACTHG----------GPVLVIT 129
Query: 235 EYMDH-DLMGLL--ESGMVD----FNEVNNASIMRQLL-------DGLSYCHKRNFLHRD 280
EY + DL+ L +S +++ F N+ R LL G+++ +N +HRD
Sbjct: 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRD 189
Query: 281 IKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAID 340
+ N+L+ N K+ DFGLAR + N + + + PE + + Y D
Sbjct: 190 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF-DCVYTVQSD 248
Query: 341 VWSCGCILGELF 352
VWS G +L E+F
Sbjct: 249 VWSYGILLWEIF 260
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 91/223 (40%), Gaps = 31/223 (13%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVR----EIKILRQLNHK 205
L +PL G + + D+ + V ++ KEG + R E+KIL + H
Sbjct: 33 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 206 -NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMR- 262
N+VNL T K G ++ E+ +L L S +F + +
Sbjct: 93 LNVVNLLGACT---------KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKD 143
Query: 263 ------------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAED 309
Q+ G+ + R +HRD+ NIL++ + VK+ DFGLAR + D
Sbjct: 144 FLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 310 RQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
R ++ W P + + Y DVWS G +L E+F
Sbjct: 204 XVRKGDARLPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIF 244
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
E+ +LR+ H NI+ T A+ + +GS + H L ++E+ F
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGS------SLYHHLH-IIET---KFEM 103
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY 314
+ I RQ G+ Y H ++ +HRD+K +NI ++ VK+ DFGLA + +
Sbjct: 104 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 163
Query: 315 TNKVITLWYRPPELLLGEER--YGPAIDVWSCGCILGELFV 353
++ + PE++ +++ Y DV++ G +L EL
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N++++ +G +K+ DFGLA+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLMIDQQGYIKVTDFGLAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 176 LKKVRLENEKEGFPITAVREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
LK +EKE + E+KI+ L H+NIVNL T G ++
Sbjct: 76 LKSTAHADEKEAL----MSELKIMSHLGQHENIVNLLGACTHG----------GPVLVIT 121
Query: 235 EYMDH-DLMGLLE-SGMVDFNEVNNASI-MRQLL-------DGLSYCHKRNFLHRDIKCS 284
EY + DL+ L D ++ + + +R LL G+++ +N +HRD+
Sbjct: 122 EYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAAR 181
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
N+L+ N K+ DFGLAR + N + + + PE + + Y DVWS
Sbjct: 182 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF-DCVYTVQSDVWSY 240
Query: 345 GCILGELF 352
G +L E+F
Sbjct: 241 GILLWEIF 248
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 15/162 (9%)
Query: 192 AVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
+E++I++ L H +VNL D+ D F +V + DL L+ V
Sbjct: 62 VFKELQIMQGLEHPFLVNLWYSFQDEEDM---------FMVVDLLLGGDLRYHLQQN-VH 111
Query: 252 FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQ 311
F E + +L+ L Y + +HRD+K NIL++ G V + DF +A + R+
Sbjct: 112 FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML---PRE 168
Query: 312 RPYTNKVITLWYRPPELLLGEE--RYGPAIDVWSCGCILGEL 351
T T Y PE+ + Y A+D WS G EL
Sbjct: 169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYEL 210
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
E+ +LR+ H NI+ T A+ + +GS + H L ++E+ F
Sbjct: 74 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGS------SLYHHLH-IIET---KFEM 123
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY 314
+ I RQ G+ Y H ++ +HRD+K +NI ++ VK+ DFGLA + +
Sbjct: 124 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 183
Query: 315 TNKVITLWYRPPELLLGEER--YGPAIDVWSCGCILGELFV 353
++ + PE++ +++ Y DV++ G +L EL
Sbjct: 184 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 224
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
N+L++ +G +++ DFG A+ T + Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPE-----YLAPEIILS-KGYNKAVDWWAL 224
Query: 345 GCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 225 GVLIYEMAAGYPPF 238
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 12/95 (12%)
Query: 259 SIMRQLLDGLSYCHKRN--FLHRDIKCSNILMNN-RGEVKLADFGLARLYNAEDRQRPYT 315
S RQ+L GL + H R +HRD+KC NI + G VK+ D GLA L A +
Sbjct: 133 SWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA-----SFA 187
Query: 316 NKVI-TLWYRPPELLLGEERYGPAIDVWSCG-CIL 348
VI T + PE EE+Y ++DV++ G C L
Sbjct: 188 KAVIGTPEFXAPEXY--EEKYDESVDVYAFGXCXL 220
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 112 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
N+L++ +G +++ DFG A+ + R +T T Y PE++L + Y A+D W+
Sbjct: 172 NLLIDQQGYIQVTDFGFAK----RVKGRTWT-LCGTPEYLAPEIILS-KGYNKAVDWWAL 225
Query: 345 GCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 226 GVLIYEMAAGYPPF 239
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 176 LKKVRLENEKEGFPITAVREIKILRQL-NHKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
LK +EKE + E+KI+ L H+NIVNL T G ++
Sbjct: 84 LKSTAHADEKEAL----MSELKIMSHLGQHENIVNLLGACTHG----------GPVLVIT 129
Query: 235 EYMDH-DLMGLLE-SGMVDFNEVNNASI-MRQLL-------DGLSYCHKRNFLHRDIKCS 284
EY + DL+ L D ++ + + +R LL G+++ +N +HRD+
Sbjct: 130 EYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAAR 189
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
N+L+ N K+ DFGLAR + N + + + PE + + Y DVWS
Sbjct: 190 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF-DCVYTVQSDVWSY 248
Query: 345 GCILGELF 352
G +L E+F
Sbjct: 249 GILLWEIF 256
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
E+ +LR+ H NI+ T A+ + +GS L L + F
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGS----------SLYHHLHASETKFEM 119
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY 314
I RQ G+ Y H ++ +HRD+K +NI ++ VK+ DFGLA + +
Sbjct: 120 KKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179
Query: 315 TNKVITLWYRPPELLLGEER--YGPAIDVWSCGCILGELFV 353
++ + PE++ ++ Y DV++ G +L EL
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 97 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 156
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
N+L++ +G +++ DFG A+ + R +T T Y PE++L + Y A+D W+
Sbjct: 157 NLLIDQQGYIQVTDFGFAK----RVKGRTWT-LCGTPEYLAPEIILS-KGYNKAVDWWAL 210
Query: 345 GCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 211 GVLIYEMAAGYPPF 224
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
E+ +LR+ H NI+ T A+ + +GS + H L ++E+ F
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGS------SLYHHLH-IIET---KFEM 131
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY 314
+ I RQ G+ Y H ++ +HRD+K +NI ++ VK+ DFGLA + +
Sbjct: 132 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 191
Query: 315 TNKVITLWYRPPELLLGEER--YGPAIDVWSCGCILGELFV 353
++ + PE++ +++ Y DV++ G +L EL
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 195 EIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNE 254
E+ +LR+ H NI+ T A+ + +GS L L + F
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGS----------SLYHHLHASETKFEM 119
Query: 255 VNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPY 314
I RQ G+ Y H ++ +HRD+K +NI ++ VK+ DFGLA + +
Sbjct: 120 KKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179
Query: 315 TNKVITLWYRPPELLLGEER--YGPAIDVWSCGCILGELFV 353
++ + PE++ ++ Y DV++ G +L EL
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLXGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 132 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 191
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 192 NLLIDQQGYIQVTDFGFAK------RVKGATWTLCGTPEYLAPEIILS-KGYNKAVDWWA 244
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 245 LGVLIYEMAAGYPPF 259
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAEDRQRPYTNKVITL 321
Q+ G+ + R +HRD+ NIL++ + VK+ DFGLAR +Y D R ++
Sbjct: 201 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 260
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGELF 352
W P + + Y DVWS G +L E+F
Sbjct: 261 WMAPETIF--DRVYTIQSDVWSFGVLLWEIF 289
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 33/174 (18%)
Query: 193 VREIKILRQLNHKNIVNLREI---VTDKSDALDFRKDK-GSFYLVFEYMDHDLMGLLESG 248
+RE ++L++LNHKNIV L I T + L GS Y V E + GL ES
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESE 113
Query: 249 MVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM----NNRGEVKLADFGLAR- 303
+ ++R ++ G+++ + +HR+IK NI+ + + KL DFG AR
Sbjct: 114 FL--------IVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165
Query: 304 ---------LYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
LY E+ P ++ R +++YG +D+WS G
Sbjct: 166 LEDDEQFVSLYGTEEYLHP------DMYERAVLRKDHQKKYGATVDLWSIGVTF 213
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAEDRQRPYTNKVITL 321
Q+ G+ + R +HRD+ NIL++ + VK+ DFGLAR +Y D R ++
Sbjct: 199 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 258
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGELF 352
W P + + Y DVWS G +L E+F
Sbjct: 259 WMAPETIF--DRVYTIQSDVWSFGVLLWEIF 287
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAEDRQRPYTNKVITL 321
Q+ G+ + R +HRD+ NIL++ + VK+ DFGLAR +Y D R ++
Sbjct: 206 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 265
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGELF 352
W P + + Y DVWS G +L E+F
Sbjct: 266 WMAPETIF--DRVYTIQSDVWSFGVLLWEIF 294
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ +G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 122 QIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 181
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 182 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAEDRQRPYTNKVITL 321
Q+ G+ + R +HRD+ NIL++ + VK+ DFGLAR +Y D R ++
Sbjct: 208 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 267
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGELF 352
W P + + Y DVWS G +L E+F
Sbjct: 268 WMAPETIF--DRVYTIQSDVWSFGVLLWEIF 296
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 112 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 172 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 224
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 225 LGVLIYEMAAGYPPF 239
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 112 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 172 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 224
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 225 LGVLIYEMAAGYPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 112 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 172 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 224
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 225 LGVLIYEMAAGYPPF 239
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 112 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 172 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 224
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 225 LGVLIYEMAAGYPPF 239
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 64/140 (45%), Gaps = 8/140 (5%)
Query: 223 FRKDKGSFYLVFEYM-DHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDI 281
F+ DK Y+V EYM DL+ L+ + D E +++ L H +HRD+
Sbjct: 144 FQDDK-YLYMVMEYMPGGDLVNLMSN--YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDV 200
Query: 282 KCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLL---GEERYGPA 338
K N+L++ G +KLADFG + E V T Y PE+L G+ YG
Sbjct: 201 KPDNMLLDKHGHLKLADFGTCMKMD-ETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRE 259
Query: 339 IDVWSCGCILGELFVKKPLF 358
D WS G L E+ V F
Sbjct: 260 CDWWSVGVFLFEMLVGDTPF 279
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 132 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 191
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 192 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 244
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 245 LGVLIYEMAAGYPPF 259
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 83/194 (42%), Gaps = 32/194 (16%)
Query: 176 LKKVRLENEKEGFPITAVREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVF 234
LK +EKE + E+KI+ L H+NIVNL T L ++
Sbjct: 84 LKSTAHADEKEAL----MSELKIMSHLGQHENIVNLLGACTHGGPVL----------VIT 129
Query: 235 EYMDH-DLMGLLES----GM-VDFNEVNNAS----------IMRQLLDGLSYCHKRNFLH 278
EY + DL+ L G+ +N +N Q+ G+++ +N +H
Sbjct: 130 EYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIH 189
Query: 279 RDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPA 338
RD+ N+L+ N K+ DFGLAR + N + + + PE + + Y
Sbjct: 190 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF-DCVYTVQ 248
Query: 339 IDVWSCGCILGELF 352
DVWS G +L E+F
Sbjct: 249 SDVWSYGILLWEIF 262
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY M + F+E + Q++ Y H + ++RD+K
Sbjct: 112 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N++++ +G +K+ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 172 NLMIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 224
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 225 LGVLIYEMAAGYPPF 239
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 112 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 172 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 224
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 225 LGVLIYEMAAGYPPF 239
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 198 ILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVN 256
I++ +H N+++L I + +GS +V YM H DL + NE +
Sbjct: 85 IMKDFSHPNVLSLLGICL---------RSEGSPLVVLPYMKHGDLRNFIR------NETH 129
Query: 257 NASIMR------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR--LYNAE 308
N ++ Q+ G+ + + F+HRD+ N +++ + VK+ADFGLAR L
Sbjct: 130 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEF 189
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
D T + + + E L +++ DVWS G +L EL +
Sbjct: 190 DSVHNKTGAKLPVKWMALE-SLQTQKFTTKSDVWSFGVLLWELMTR 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N++++ +G +K+ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLMIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 33/174 (18%)
Query: 193 VREIKILRQLNHKNIVNL---REIVTDKSDALDFR-KDKGSFYLVFEYMDHDLMGLLESG 248
+RE ++L++LNHKNIV L E T + L GS Y V E + GL ES
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESE 113
Query: 249 MVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM----NNRGEVKLADFGLAR- 303
+ ++R ++ G+++ + +HR+IK NI+ + + KL DFG AR
Sbjct: 114 FL--------IVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165
Query: 304 ---------LYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
LY E+ P ++ R +++YG +D+WS G
Sbjct: 166 LEDDEQFVXLYGTEEYLHP------DMYERAVLRKDHQKKYGATVDLWSIGVTF 213
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI--T 320
+++ L Y H R+ ++RDIK N++++ G +K+ DFGL + E T K T
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKTFCGT 168
Query: 321 LWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
Y PE +L + YG A+D W G ++ E+
Sbjct: 169 PEYLAPE-VLEDNDYGRAVDWWGLGVVMYEM 198
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 104 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 163
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 164 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 216
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 217 LGVLIYEMAAGYPPF 231
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY M + F+E + Q++ Y H + ++RD+K
Sbjct: 112 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N++++ +G +K+ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 172 NLMIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 224
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 225 LGVLIYEMAAGYPPF 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY M + F+E + Q++ Y H + ++RD+K
Sbjct: 112 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N++++ +G +K+ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 172 NLMIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 224
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 225 LGVLIYEMAAGYPPF 239
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI--T 320
+++ L Y H R+ ++RDIK N++++ G +K+ DFGL + E T K T
Sbjct: 116 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKTFCGT 171
Query: 321 LWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
Y PE +L + YG A+D W G ++ E+
Sbjct: 172 PEYLAPE-VLEDNDYGRAVDWWGLGVVMYEM 201
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 98 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 157
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 158 NLLIDEQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 210
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 211 LGVLIYEMAAGYPPF 225
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVR----EIKILRQLNHK 205
L +PL G + + D+ + V ++ KEG + R E+KIL + H
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 206 -NIVNLREIVTDKSDAL-------------DFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
N+VNL T L + + K + ++ ++ DL D
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-------D 134
Query: 252 FNEVNNASIMR-QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAED 309
F + + Q+ G+ + R +HRD+ NIL++ + VK+ DFGLAR + D
Sbjct: 135 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 194
Query: 310 RQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
R ++ W P + + Y DVWS G +L E+F
Sbjct: 195 XVRKGDARLPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIF 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N++++ +G +++ DFGLA+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLMIDQQGYIQVTDFGLAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVR----EIKILRQLNHK 205
L +PL G + + D+ + V ++ KEG + R E+KIL + H
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 206 -NIVNLREIVTDKSDAL-------------DFRKDKGSFYLVFEYMDHDLMGLLESGMVD 251
N+VNL T L + + K + ++ ++ DL D
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-------D 143
Query: 252 FNEVNNASIMR-QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAED 309
F + + Q+ G+ + R +HRD+ NIL++ + VK+ DFGLAR + D
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 310 RQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
R ++ W P + + Y DVWS G +L E+F
Sbjct: 204 XVRKGDARLPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIF 244
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 186 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 185 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 89/216 (41%), Gaps = 15/216 (6%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVR----EIKILRQLNHK 205
L +PL G + + D+ + V ++ KEG + R E+KIL + H
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 206 -NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLL------ESGMVDFNEVNNA 258
N+VNL T L + F + Y+ + E DF + +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 259 SIMR-QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAEDRQRPYTN 316
Q+ G+ + R +HRD+ NIL++ + VK+ DFGLAR + D R
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 317 KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
++ W P + + Y DVWS G +L E+F
Sbjct: 202 RLPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIF 235
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI--T 320
+++ L Y H R+ ++RDIK N++++ G +K+ DFGL + E T K T
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKTFCGT 168
Query: 321 LWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
Y PE +L + YG A+D W G ++ E+
Sbjct: 169 PEYLAPE-VLEDNDYGRAVDWWGLGVVMYEM 198
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 90/224 (40%), Gaps = 32/224 (14%)
Query: 150 LMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVR----EIKILRQLNHK 205
L +PL G + + D+ + V ++ KEG + R E+KIL + H
Sbjct: 32 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 91
Query: 206 -NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDFNEVNNASIMR- 262
N+VNL T K G ++ E+ +L L S +F +
Sbjct: 92 LNVVNLLGACT---------KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYK 142
Query: 263 -------------QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR-LYNAE 308
Q+ G+ + R +HRD+ NIL++ + VK+ DFGLAR +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
Query: 309 DRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
D R ++ W P + + Y DVWS G +L E+F
Sbjct: 203 DXVRKGDARLPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIF 244
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 192 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 131 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 190
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 191 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 192 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 192 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F E + Q++ Y H + ++RD+K
Sbjct: 132 KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 191
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 192 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 244
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 245 LGVLIYEMAAGYPPF 259
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 188 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 188 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F E + Q++ Y H + ++RD+K
Sbjct: 106 KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 165
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 166 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 218
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 219 LGVLIYEMAAGYPPF 233
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 188
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 189 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 185 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 185 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 187 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 188 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 186 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 188 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 40/261 (15%)
Query: 119 KKRRRQLRGDPMEMQA-AAPIQSNSTNNSSRPLMEPLAAGGLSLNNFSVSLFTDELVALK 177
KKR+R RG ++ A I + + + + E + G S F VA+K
Sbjct: 4 KKRKRGSRGGKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVK 63
Query: 178 KVRLENEKEGFPITAVREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEY 236
++ ++ F A+ EIK+L + + H N++ R ++ +D Y+ E
Sbjct: 64 RMLID-----FCDIALMEIKLLTESDDHPNVI--RYYCSETTDRF--------LYIALEL 108
Query: 237 MDHDLMGLLESGMV-DFN-----EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
+ +L L+ES V D N E N S++RQ+ G+++ H +HRD+K NIL++
Sbjct: 109 CNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 168
Query: 291 RG-------------EVKLADFGLARLYNAEDR--QRPYTNKVITLWYRPPELL--LGEE 333
+ ++DFGL + ++ + N T +R PELL +
Sbjct: 169 SSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKR 228
Query: 334 RYGPAIDVWSCGCILGELFVK 354
R +ID++S GC+ + K
Sbjct: 229 RLTRSIDIFSMGCVFYYILSK 249
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 135 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 194
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 195 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 159 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 218
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 219 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 185 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 187 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 150 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 209
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 210 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 244
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F E + Q++ Y H + ++RD+K
Sbjct: 112 KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 172 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 224
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 225 LGVLIYEMAAGYPPF 239
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI--T 320
+++ L Y H R+ ++RDIK N++++ G +K+ DFGL + E T K T
Sbjct: 118 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGT 173
Query: 321 LWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
Y PE +L + YG A+D W G ++ E+
Sbjct: 174 PEYLAPE-VLEDNDYGRAVDWWGLGVVMYEM 203
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 119 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 178
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 179 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI--T 320
+++ L Y H R+ ++RDIK N++++ G +K+ DFGL + E T K T
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGT 168
Query: 321 LWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
Y PE +L + YG A+D W G ++ E+
Sbjct: 169 PEYLAPE-VLEDNDYGRAVDWWGLGVVMYEM 198
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFGLA+L AE+++ + +
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 185 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 40/261 (15%)
Query: 119 KKRRRQLRGDPMEMQA-AAPIQSNSTNNSSRPLMEPLAAGGLSLNNFSVSLFTDELVALK 177
KKR+R RG ++ A I + + + + E + G S F VA+K
Sbjct: 4 KKRKRGSRGGKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVK 63
Query: 178 KVRLENEKEGFPITAVREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYLVFEY 236
++ ++ F A+ EIK+L + + H N++ R ++ +D Y+ E
Sbjct: 64 RMLID-----FCDIALMEIKLLTESDDHPNVI--RYYCSETTDRF--------LYIALEL 108
Query: 237 MDHDLMGLLESGMV-DFN-----EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN 290
+ +L L+ES V D N E N S++RQ+ G+++ H +HRD+K NIL++
Sbjct: 109 CNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 168
Query: 291 RG-------------EVKLADFGLARLYNAEDR--QRPYTNKVITLWYRPPELL--LGEE 333
+ ++DFGL + ++ + N T +R PELL +
Sbjct: 169 SSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKR 228
Query: 334 RYGPAIDVWSCGCILGELFVK 354
R +ID++S GC+ + K
Sbjct: 229 RLTRSIDIFSMGCVFYYILSK 249
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI--T 320
+++ L Y H R+ ++RDIK N++++ G +K+ DFGL + E T K T
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGT 168
Query: 321 LWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
Y PE +L + YG A+D W G ++ E+
Sbjct: 169 PEYLAPE-VLEDNDYGRAVDWWGLGVVMYEM 198
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 85/205 (41%), Gaps = 33/205 (16%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VALK +R + + A EI +L+++ K+ N + + SD +F G +
Sbjct: 48 VALKIIRNVGK---YREAARLEINVLKKIKEKDKEN-KFLCVLMSDWFNFH---GHMCIA 100
Query: 234 FEYMDHDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN-- 290
FE + + L E+ + + + QL L + H+ H D+K NIL N
Sbjct: 101 FELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSE 160
Query: 291 -----------------RGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEE 333
+++ADFG A +T V T YRPPE++L E
Sbjct: 161 FETLYNEHKSCEEKSVKNTSIRVADFGSATF-----DHEHHTTIVATRHYRPPEVIL-EL 214
Query: 334 RYGPAIDVWSCGCILGELFVKKPLF 358
+ DVWS GCIL E + LF
Sbjct: 215 GWAQPCDVWSIGCILFEYYRGFTLF 239
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 61 SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPE 100
SL DL+ +MLE DP +RIT +AL + + PE
Sbjct: 304 SLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPE 343
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY M + F E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N++++ +G +K+ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLMIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
Y V EY++ DLM ++ + F E + ++ GL + + ++RD+K N++++
Sbjct: 97 YFVMEYVNGGDLMYHIQQ-VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 155
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTNKVI--TLWYRPPELLLGEERYGPAIDVWSCGCI 347
+ G +K+ADFG+ + E+ T K T Y PE ++ + YG ++D W+ G +
Sbjct: 156 SEGHIKIADFGMCK----ENIWDGVTTKXFCGTPDYIAPE-IIAYQPYGKSVDWWAFGVL 210
Query: 348 LGELFVKKPLF 358
L E+ + F
Sbjct: 211 LYEMLAGQAPF 221
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 85/205 (41%), Gaps = 33/205 (16%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VALK +R + + A EI +L+++ K+ N + + SD +F G +
Sbjct: 57 VALKIIRNVGK---YREAARLEINVLKKIKEKDKEN-KFLCVLMSDWFNFH---GHMCIA 109
Query: 234 FEYMDHDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN-- 290
FE + + L E+ + + + QL L + H+ H D+K NIL N
Sbjct: 110 FELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSE 169
Query: 291 -----------------RGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEE 333
+++ADFG A +T V T YRPPE++L E
Sbjct: 170 FETLYNEHKSCEEKSVKNTSIRVADFGSATF-----DHEHHTTIVATRHYRPPEVIL-EL 223
Query: 334 RYGPAIDVWSCGCILGELFVKKPLF 358
+ DVWS GCIL E + LF
Sbjct: 224 GWAQPCDVWSIGCILFEYYRGFTLF 248
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 61 SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPE 100
SL DL+ +MLE DP +RIT +AL + + PE
Sbjct: 313 SLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPE 352
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI--T 320
+++ L Y H R+ ++RDIK N++++ G +K+ DFGL + E T K T
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGT 168
Query: 321 LWYRPPELLLGEERYGPAIDVWSCGCILGEL 351
Y PE +L + YG A+D W G ++ E+
Sbjct: 169 PEYLAPE-VLEDNDYGRAVDWWGLGVVMYEM 198
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY M + F E + Q++ Y H + ++RD+K
Sbjct: 112 KDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N++++ +G +K+ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 172 NLMIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 224
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 225 LGVLIYEMAAGYPPF 239
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 231 YLVFEYMDH-DLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN 289
Y V EY++ DLM ++ + F E + ++ GL + + ++RD+K N++++
Sbjct: 418 YFVMEYVNGGDLMYHIQQ-VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 476
Query: 290 NRGEVKLADFGLARLYNAEDRQRPYTNKVI--TLWYRPPELLLGEERYGPAIDVWSCGCI 347
+ G +K+ADFG+ + E+ T K T Y PE ++ + YG ++D W+ G +
Sbjct: 477 SEGHIKIADFGMCK----ENIWDGVTTKXFCGTPDYIAPE-IIAYQPYGKSVDWWAFGVL 531
Query: 348 LGELFVKKPLF 358
L E+ + F
Sbjct: 532 LYEMLAGQAPF 542
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F E + Q++ Y H + ++RD+K
Sbjct: 104 KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 163
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 164 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 216
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 217 LGVLIYEMAAGYPPF 231
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 85/205 (41%), Gaps = 33/205 (16%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
VALK +R + + A EI +L+++ K+ N + + SD +F G +
Sbjct: 80 VALKIIRNVGK---YREAARLEINVLKKIKEKDKEN-KFLCVLMSDWFNFH---GHMCIA 132
Query: 234 FEYMDHDLMGLL-ESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN-- 290
FE + + L E+ + + + QL L + H+ H D+K NIL N
Sbjct: 133 FELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSE 192
Query: 291 -----------------RGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEE 333
+++ADFG A +T V T YRPPE++L E
Sbjct: 193 FETLYNEHKSCEEKSVKNTSIRVADFGSATF-----DHEHHTTIVATRHYRPPEVIL-EL 246
Query: 334 RYGPAIDVWSCGCILGELFVKKPLF 358
+ DVWS GCIL E + LF
Sbjct: 247 GWAQPCDVWSIGCILFEYYRGFTLF 271
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 61 SLMPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPE 100
SL DL+ +MLE DP +RIT +AL + + PE
Sbjct: 336 SLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPE 375
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ ++ P F
Sbjct: 224 LGVLIYQMAAGYPPF 238
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
N+L++ +G +++ DFG A+ T + + PE++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALA-----PEIILS-KGYNKAVDWWAL 224
Query: 345 GCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 225 GVLIYEMAAGYPPF 238
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N++++ +G +++ DFG A+ R + T + T Y PE+++ + Y A+D W+
Sbjct: 171 NLIIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIIIS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N++++ +G +++ DFG A+ R + T + T Y PE++L + Y A+D W+
Sbjct: 171 NLMIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 79/191 (41%), Gaps = 19/191 (9%)
Query: 176 LKKVRLENEKEGFPITAVREIKILRQLN-HKNIVNLREIVTDKS------------DALD 222
LK +EKE + E+KI+ L H+NIVNL T D L+
Sbjct: 69 LKSTAHADEKEAL----MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN 124
Query: 223 FRKDKGSFYLVFEYM-DHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDI 281
F + K L D GL + + Q+ G+++ +N +HRD+
Sbjct: 125 FLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDV 184
Query: 282 KCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDV 341
N+L+ N K+ DFGLAR + N + + + PE + + Y DV
Sbjct: 185 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF-DCVYTVQSDV 243
Query: 342 WSCGCILGELF 352
WS G +L E+F
Sbjct: 244 WSYGILLWEIF 254
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 91/221 (41%), Gaps = 27/221 (12%)
Query: 152 EPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAV-REIKILRQLN-HKNIVN 209
E L G + +VSL + A+K + ++ G + V RE++ L Q +KNI+
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIE---KQAGHSRSRVFREVETLYQCQGNKNILE 75
Query: 210 LREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLS 269
L ++F +D FYLVFE + + FNE + ++R + L
Sbjct: 76 L----------IEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALD 125
Query: 270 YCHKRNFLHRDIKCSNILMNN---RGEVKLADFGLARLYNAEDRQRPYTNKVITL----- 321
+ H + HRD+K NIL + VK+ DF L + P T +T
Sbjct: 126 FLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSA 185
Query: 322 WYRPPELLL----GEERYGPAIDVWSCGCILGELFVKKPLF 358
Y PE++ Y D+WS G +L + P F
Sbjct: 186 EYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 67 ALDLLDKMLELDPERRITAEQALKSVWLKNVHPE 100
A DL+ K+L D ++R++A Q L+ W++ PE
Sbjct: 272 AKDLISKLLVRDAKQRLSAAQVLQHPWVQGQAPE 305
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E V ++++ LE E+ + + NH NIV R ++
Sbjct: 51 TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE---------- 100
Query: 230 FYLVFEYMDH-DLMGLLESGMVD-FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
++V +M + L+ + +D NE+ A I++ +L L Y H ++HR +K S+IL
Sbjct: 101 LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHIL 160
Query: 288 MNNRGEVKLADF--GLARLYNAEDRQR------PYTNKVITLWYRPPELLLGEERYGPAI 339
++ G+V L+ L+ + + + RQR Y+ KV+ W P L + Y
Sbjct: 161 ISVDGKVYLSGLRSNLSMISHGQ-RQRVVHDFPKYSVKVLP-WLSPEVLQQNLQGYDAKS 218
Query: 340 DVWSCGCILGEL 351
D++S G EL
Sbjct: 219 DIYSVGITACEL 230
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 170 TDELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGS 229
T E V ++++ LE E+ + + NH NIV R ++
Sbjct: 35 TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE---------- 84
Query: 230 FYLVFEYMDH-DLMGLLESGMVD-FNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNIL 287
++V +M + L+ + +D NE+ A I++ +L L Y H ++HR +K S+IL
Sbjct: 85 LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHIL 144
Query: 288 MNNRGEVKLADF--GLARLYNAEDRQR------PYTNKVITLWYRPPELLLGEERYGPAI 339
++ G+V L+ L+ + + + RQR Y+ KV+ W P L + Y
Sbjct: 145 ISVDGKVYLSGLRSNLSMISHGQ-RQRVVHDFPKYSVKVLP-WLSPEVLQQNLQGYDAKS 202
Query: 340 DVWSCGCILGEL 351
D++S G EL
Sbjct: 203 DIYSVGITACEL 214
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 13/188 (6%)
Query: 179 VRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSD-----ALDFR-KDKGSFYL 232
R + E+ + + +++ IL++ K+I++ R ++ L F + Y
Sbjct: 57 ARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116
Query: 233 VFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRG 292
V +Y++ + F E ++ L Y H N ++RD+K NIL++++G
Sbjct: 117 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG 176
Query: 293 EVKLADFGLARLYNAEDRQRPYTNKVI--TLWYRPPELLLGEERYGPAIDVWSCGCILGE 350
+ L DFGL + E+ + T T Y PE +L ++ Y +D W G +L E
Sbjct: 177 HIVLTDFGLCK----ENIEHNSTTSTFCGTPEYLAPE-VLHKQPYDRTVDWWCLGAVLYE 231
Query: 351 LFVKKPLF 358
+ P F
Sbjct: 232 MLYGLPPF 239
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 195 EIKIL-RQLNHKNIVNLREIVTDKSDALDFRKDKGSF-YLVFEYMDHD--LMGLLESGMV 250
EI+IL R H NI+ L+++ D G + Y+V E M L +L
Sbjct: 65 EIEILLRYGQHPNIITLKDVY-----------DDGKYVYVVTELMKGGELLDKILRQKF- 112
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM----NNRGEVKLADFGLARLYN 306
F+E ++++ + + Y H + +HRD+K SNIL N +++ DFG A+
Sbjct: 113 -FSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171
Query: 307 AEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
AE+ T + PE +L + Y A D+WS G +L
Sbjct: 172 AENGL--LMTPCYTANFVAPE-VLERQGYDAACDIWSLGVLL 210
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 48 PKKIHRRRLREEFSL-------MPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPE 100
P++I R +FSL + A DL+ KML +DP +R+TA L+ W+ VH +
Sbjct: 228 PEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI--VHWD 285
Query: 101 SMPPPQLPTWQDCHELWSKKRRRQLRGDPMEMQAAAPIQSNSTNNSSRPLMEPLAAGGLS 160
+P QL QD P ++ A ++ N + P++EP+ L+
Sbjct: 286 QLPQYQL-NRQDA---------------PHLVKGAMAATYSALNRNQSPVLEPVGRSTLA 329
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 43/209 (20%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYL 232
VA+K++ ++ F A+ EIK+L + + H N++ R ++ +D Y+
Sbjct: 42 VAVKRMLID-----FCDIALMEIKLLTESDDHPNVI--RYYCSETTDRF--------LYI 86
Query: 233 VFEYMDHDLMGLLESGMV-DFN-----EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
E + +L L+ES V D N E N S++RQ+ G+++ H +HRD+K NI
Sbjct: 87 ALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNI 146
Query: 287 LMNNRG-------------EVKLADFGLA-RLYNAEDRQRP-YTNKVITLWYRPPEL--- 328
L++ + ++DFGL +L + + R N T +R PEL
Sbjct: 147 LVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEE 206
Query: 329 ---LLGEERYGPAIDVWSCGCILGELFVK 354
L + R +ID++S GC+ + K
Sbjct: 207 SNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
KD + Y+V EY+ M + F+E + Q++ Y H + ++RD+K
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 285 NILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 343
N+L++ +G +++ DFG A+ R + T + T Y P ++L + Y A+D W+
Sbjct: 171 NLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPAIILS-KGYNKAVDWWA 223
Query: 344 CGCILGELFVKKPLF 358
G ++ E+ P F
Sbjct: 224 LGVLIYEMAAGYPPF 238
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 103/273 (37%), Gaps = 60/273 (21%)
Query: 137 PIQSNSTNNSSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREI 196
P++ N ++ L G S + VA+K V+ + + TA+ EI
Sbjct: 22 PVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVK---SAQHYTETALDEI 78
Query: 197 KILRQLNHKNIVNL-REIVTDKSDALDFRKDKG-SFYLVFEYMDHDLMG-LLESGMVDFN 253
K+L+ + + + +++V D G +VFE + H L+ +++S
Sbjct: 79 KLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLP 138
Query: 254 EVNNASIMRQLLDGLSYCHKR-NFLHRDIKCSNILM------------------------ 288
SI+RQ+L GL Y H + +H DIK NILM
Sbjct: 139 VRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPP 198
Query: 289 -----------------------NNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRP 325
++ VK+AD G NA + +T + T YR
Sbjct: 199 PSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLG-----NACWVHKHFTEDIQTRQYRS 253
Query: 326 PELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
E+L+G PA D+WS C+ EL LF
Sbjct: 254 IEVLIGAGYSTPA-DIWSTACMAFELATGDYLF 285
Score = 27.7 bits (60), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 69 DLLDKMLELDPERRITAEQALKSVWLKN 96
D L MLE+ PE+R +A + L+ WL +
Sbjct: 362 DFLIPMLEMVPEKRASAGECLRHPWLNS 389
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 225 KDKGSFYLVFEY-MDHDLMGLLESGMVDFNEVNNASIMR----QLLDGLSYCHKRNFLHR 279
+D+ YLV EY + DL+ LL F E A + R +++ + H+ ++HR
Sbjct: 131 QDENYLYLVMEYYVGGDLLTLLSK----FGERIPAEMARFYLAEIVMAIDSVHRLGYVHR 186
Query: 280 DIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLG------EE 333
DIK NIL++ G ++LADFG A+ R V T Y PE+L
Sbjct: 187 DIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLV-AVGTPDYLSPEILQAVGGGPGTG 245
Query: 334 RYGPAIDVWSCGCILGELFVKKPLF 358
YGP D W+ G E+F + F
Sbjct: 246 SYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 260 IMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQR------- 312
I Q+ + + + H + +HRD+K SNI VK+ DFGL + ++ ++
Sbjct: 169 IFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 228
Query: 313 ---PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
+ +V T Y PE + G Y +D++S G IL EL
Sbjct: 229 AYATHXGQVGTKLYMSPEQIHG-NNYSHKVDIFSLGLILFELL 270
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 256 NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNA-EDRQRPY 314
N ++ Q+ G+ Y + NF+HRD+ N+L+ + K++DFGL++ A E+ +
Sbjct: 470 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529
Query: 315 TN-KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
T+ K WY P + ++ DVWS G ++ E F
Sbjct: 530 THGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWEAF 566
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 27/196 (13%)
Query: 172 ELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
E VA+K +EK F T + +LR H+NI+ I +D + R +
Sbjct: 61 ENVAVKIFSSRDEKSWFRETELYNTVMLR---HENILGF--IASDMTS----RHSSTQLW 111
Query: 232 LVFEYMDHDLMGLLES-GMVDFNEVNNASIMRQLLDGLSYCHKRNF--------LHRDIK 282
L+ Y H++ L + + + V+ I+ + GL++ H F HRD+K
Sbjct: 112 LITHY--HEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 169
Query: 283 CSNILMNNRGEVKLADFGLARLYNAEDRQRPYTN--KVITLWYRPPELLLGEERYG---- 336
NIL+ G+ +AD GLA +++ Q N +V T Y PE+L +
Sbjct: 170 SKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDS 229
Query: 337 -PAIDVWSCGCILGEL 351
+D+W+ G +L E+
Sbjct: 230 YKRVDIWAFGLVLWEV 245
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 27/196 (13%)
Query: 172 ELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
E VA+K +EK F T + +LR H+NI+ I +D + R +
Sbjct: 32 ENVAVKIFSSRDEKSWFRETELYNTVMLR---HENILGF--IASDMTS----RHSSTQLW 82
Query: 232 LVFEYMDHDLMGLLES-GMVDFNEVNNASIMRQLLDGLSYCHKRNF--------LHRDIK 282
L+ Y H++ L + + + V+ I+ + GL++ H F HRD+K
Sbjct: 83 LITHY--HEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 140
Query: 283 CSNILMNNRGEVKLADFGLARLYNAEDRQRPYTN--KVITLWYRPPELLLGEERYG---- 336
NIL+ G+ +AD GLA +++ Q N +V T Y PE+L +
Sbjct: 141 SKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDS 200
Query: 337 -PAIDVWSCGCILGEL 351
+D+W+ G +L E+
Sbjct: 201 YKRVDIWAFGLVLWEV 216
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 256 NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNA-EDRQRPY 314
N ++ Q+ G+ Y + NF+HRD+ N+L+ + K++DFGL++ A E+ +
Sbjct: 128 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Query: 315 TN-KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
T+ K WY P + ++ DVWS G ++ E F
Sbjct: 188 THGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWEAF 224
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 256 NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNA-EDRQRPY 314
N ++ Q+ G+ Y + NF+HRD+ N+L+ + K++DFGL++ A E+ +
Sbjct: 128 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Query: 315 TN-KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
T+ K WY P + ++ DVWS G ++ E F
Sbjct: 188 THGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWEAF 224
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 43/209 (20%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLN-HKNIVNLREIVTDKSDALDFRKDKGSFYL 232
VA+K++ ++ F A+ EIK+L + + H N++ R ++ +D Y+
Sbjct: 42 VAVKRMLID-----FCDIALMEIKLLTESDDHPNVI--RYYCSETTDRF--------LYI 86
Query: 233 VFEYMDHDLMGLLESGMV-DFN-----EVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
E + +L L+ES V D N E N S++RQ+ G+++ H +HRD+K NI
Sbjct: 87 ALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNI 146
Query: 287 LMNNRG-------------EVKLADFGLARLYNAEDR--QRPYTNKVITLWYRPPEL--- 328
L++ + ++DFGL + ++ + N T +R PEL
Sbjct: 147 LVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEE 206
Query: 329 ---LLGEERYGPAIDVWSCGCILGELFVK 354
L + R +ID++S GC+ + K
Sbjct: 207 SNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
++ DG++Y + + F+HRD+ N ++ + VK+ DFG+ R D R ++ +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL 351
+ PE L + + + D+WS G +L E+
Sbjct: 198 WMAPE-SLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 256 NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNA-EDRQRPY 314
N ++ Q+ G+ Y + NF+HRD+ N+L+ + K++DFGL++ A E+ +
Sbjct: 471 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 530
Query: 315 TN-KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
T+ K WY P + ++ DVWS G ++ E F
Sbjct: 531 THGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWEAF 567
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 256 NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNA-EDRQRPY 314
N ++ Q+ G+ Y + NF+HRD+ N+L+ + K++DFGL++ A E+ +
Sbjct: 126 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 185
Query: 315 TN-KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
T+ K WY P + ++ DVWS G ++ E F
Sbjct: 186 THGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWEAF 222
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
++ DG++Y + + F+HRD+ N ++ + VK+ DFG+ R D R ++ +
Sbjct: 135 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL 351
+ PE L + + + D+WS G +L E+
Sbjct: 195 WMAPE-SLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 138 IQSNSTNNSSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIK 197
+Q S N S++ + L GG + L LVA+K+++ E +G + E++
Sbjct: 33 LQVASDNFSNKNI---LGRGGFG-KVYKGRLADGTLVAVKRLK-EERXQGGELQFQTEVE 87
Query: 198 ILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVN- 256
++ H+N++ LR ++ L LV+ YM + G + S + + E
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERL----------LVYPYMAN---GSVASCLRERPESQP 134
Query: 257 ------NASIMRQLLDGLSYCHKR---NFLHRDIKCSNILMNNRGEVKLADFGLARLYNA 307
I GL+Y H +HRD+K +NIL++ E + DFGLA+L +
Sbjct: 135 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 194
Query: 308 EDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
+D + T+ + PE L + DV+ G +L EL + F
Sbjct: 195 KDXHVXXAVRG-TIGHIAPE-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 27/196 (13%)
Query: 172 ELVALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFY 231
E VA+K +EK F T + +LR H+NI+ I +D + R +
Sbjct: 32 ENVAVKIFSSRDEKSWFRETELYNTVMLR---HENILGF--IASDMTS----RHSSTQLW 82
Query: 232 LVFEYMDHDLMGLLES-GMVDFNEVNNASIMRQLLDGLSYCHKRNF--------LHRDIK 282
L+ Y H++ L + + + V+ I+ + GL++ H F HRD+K
Sbjct: 83 LITHY--HEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 140
Query: 283 CSNILMNNRGEVKLADFGLARLYNAEDRQRPYTN--KVITLWYRPPELLLGEERYG---- 336
NIL+ G+ +AD GLA +++ Q N +V T Y PE+L +
Sbjct: 141 SKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDS 200
Query: 337 -PAIDVWSCGCILGEL 351
+D+W+ G +L E+
Sbjct: 201 YKRVDIWAFGLVLWEV 216
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 256 NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNA-EDRQRPY 314
N ++ Q+ G+ Y + NF+HRD+ N+L+ + K++DFGL++ A E+ +
Sbjct: 118 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 177
Query: 315 TN-KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
T+ K WY P + ++ DVWS G ++ E F
Sbjct: 178 THGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWEAF 214
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 20/174 (11%)
Query: 193 VREIKILRQL-NHKNIVNL---------REIVTDK---SDALDF-RKDKGSFYLVFEYMD 238
+ E+K+L L NH NIVNL ++T+ D L+F R+ + SF
Sbjct: 97 MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC-----S 151
Query: 239 HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLAD 298
++E + + + S Q+ G+++ +N +HRD+ NIL+ + K+ D
Sbjct: 152 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 211
Query: 299 FGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
FGLAR + N + + + PE + Y DVWS G L ELF
Sbjct: 212 FGLARHIKNDSNYVVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELF 264
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
++ DG++Y + + F+HRD+ N ++ + VK+ DFG+ R D R ++ +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL 351
+ PE L + + + D+WS G +L E+
Sbjct: 198 WMAPE-SLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G+SY +HRD+ N+L+ + VK+ DFGLARL + ++ + + +
Sbjct: 127 QIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIK 186
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L R+ DVWS G + EL F KP
Sbjct: 187 WMALESIL-RRRFTHQSDVWSYGVTVWELMTFGAKP 221
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 256 NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNA-EDRQRPY 314
N ++ Q+ G+ Y + NF+HRD+ N+L+ + K++DFGL++ A E+ +
Sbjct: 112 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQ 171
Query: 315 TN-KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
T+ K WY P + ++ DVWS G ++ E F
Sbjct: 172 THGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWEAF 208
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 25/162 (15%)
Query: 194 REIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMVDF 252
+EI IL H+NI++L E + + ++FE++ D+ + + +
Sbjct: 50 KEISILNIARHRNILHLHESFESMEELV----------MIFEFISGLDIFERINTSAFEL 99
Query: 253 NEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNR--GEVKLADFGLARLYNAEDR 310
NE S + Q+ + L + H N H DI+ NI+ R +K+ +FG AR D
Sbjct: 100 NEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159
Query: 311 QRPYTNKVITLWYRPPELLLGE----ERYGPAIDVWSCGCIL 348
R L + PE E + A D+WS G ++
Sbjct: 160 FR--------LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLV 193
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 58 EEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLKN 96
E F + A+D +D++L + + R+TA +AL+ WLK
Sbjct: 225 EAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 256 NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNA-EDRQRPY 314
N ++ Q+ G+ Y + NF+HRD+ N+L+ + K++DFGL++ A E+ +
Sbjct: 108 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 167
Query: 315 TN-KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
T+ K WY P + ++ DVWS G ++ E F
Sbjct: 168 THGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWEAF 204
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTN-KVITL 321
Q+ G+ Y + +HR++ N+L+ + +V++ADFG+A L +D+Q Y+ K
Sbjct: 141 QIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 200
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
W + G +Y DVWS G + EL
Sbjct: 201 WMALESIHFG--KYTHQSDVWSYGVTVWELMT 230
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 256 NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNA-EDRQRPY 314
N ++ Q+ G+ Y + NF+HRD+ N+L+ + K++DFGL++ A E+ +
Sbjct: 112 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 171
Query: 315 TN-KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
T+ K WY P + ++ DVWS G ++ E F
Sbjct: 172 THGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWEAF 208
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 256 NNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNA-EDRQRPY 314
N ++ Q+ G+ Y + NF+HRD+ N+L+ + K++DFGL++ A E+ +
Sbjct: 106 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 165
Query: 315 TN-KVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
T+ K WY P + ++ DVWS G ++ E F
Sbjct: 166 THGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWEAF 202
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFG A+L AE+++ + +
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 191
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 192 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 20/174 (11%)
Query: 193 VREIKILRQL-NHKNIVNL---------REIVTDK---SDALDF-RKDKGSFYLVFEYMD 238
+ E+K+L L NH NIVNL ++T+ D L+F R+ + SF
Sbjct: 90 MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC-----S 144
Query: 239 HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLAD 298
++E + + + S Q+ G+++ +N +HRD+ NIL+ + K+ D
Sbjct: 145 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 204
Query: 299 FGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
FGLAR + N + + + PE + Y DVWS G L ELF
Sbjct: 205 FGLARDIKNDSNYVVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELF 257
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 19/172 (11%)
Query: 193 VREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSF---YLVFEYMDH-DLMGLLESG 248
+RE +++ +H ++ L V+ +S A KG ++ +M H DL L +
Sbjct: 73 LREAACMKEFDHPHVAKLVG-VSLRSRA------KGRLPIPMVILPFMKHGDLHAFLLAS 125
Query: 249 MVDFNEVNN--ASIMRQLLD---GLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLAR 303
+ N N +++R ++D G+ Y RNF+HRD+ N ++ V +ADFGL+R
Sbjct: 126 RIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
Query: 304 -LYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFVK 354
+Y+ + ++ +K+ W L + Y DVW+ G + E+ +
Sbjct: 186 KIYSGDYYRQGCASKLPVKWLALES--LADNLYTVHSDVWAFGVTMWEIMTR 235
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
Query: 225 KDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCS 284
++ G YL E L E+ E +R L L++ H + +H D+K +
Sbjct: 127 EEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPA 186
Query: 285 NILMNNRGEVKLADFG-LARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWS 343
NI + RG KL DFG L L A + + Y PELL G YG A DV+S
Sbjct: 187 NIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR----YMAPELLQGS--YGTAADVFS 240
Query: 344 CGCILGEL 351
G + E+
Sbjct: 241 LGLTILEV 248
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 88/214 (41%), Gaps = 51/214 (23%)
Query: 174 VALKKVR-LENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYL 232
VALK ++ +E KE A EI +L ++N K+ N + + D D+ G +
Sbjct: 62 VALKIIKNVEKYKEA----ARLEINVLEKINEKDPDN-KNLCVQMFDWFDYH---GHMCI 113
Query: 233 VFEYMDHDLMGLLESGMVDFNEVNNA---------SIMRQLLDGLSYCHKRNFLHRDIKC 283
FE L+GL DF + NN + QL + + H H D+K
Sbjct: 114 SFE-----LLGL---STFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKP 165
Query: 284 SNILMNN------------RGE-------VKLADFGLARLYNAEDRQRPYTNKVITLWYR 324
NIL N R E V++ DFG A ++ V T YR
Sbjct: 166 ENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF-----DHEHHSTIVSTRHYR 220
Query: 325 PPELLLGEERYGPAIDVWSCGCILGELFVKKPLF 358
PE++L E + DVWS GCI+ E +V LF
Sbjct: 221 APEVIL-ELGWSQPCDVWSIGCIIFEYYVGFTLF 253
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 68 LDLLDKMLELDPERRITAEQALKSVWLKNVHPESMPPPQL 107
DL++ MLE +P +R+T +AL+ + + E PP +L
Sbjct: 325 FDLIESMLEYEPAKRLTLGEALQHPFFARLRAE--PPNKL 362
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFG A+L AE+++ + +
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 187 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFG A+L AE+++ + +
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 184
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 185 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFG A+L AE+++ + +
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 187 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFG A+L AE+++ + +
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 187 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G++Y R +HRD+ N+L+ VK+ DFG A+L AE+++ + +
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 188
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E +L Y DVWS G + EL F KP
Sbjct: 189 WMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTN-KVITL 321
Q+ G+ Y + +HR++ N+L+ + +V++ADFG+A L +D+Q Y+ K
Sbjct: 123 QIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 182
Query: 322 WYRPPELLLGEERYGPAIDVWSCGCILGELFV 353
W + G +Y DVWS G + EL
Sbjct: 183 WMALESIHFG--KYTHQSDVWSYGVTVWELMT 212
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 94/230 (40%), Gaps = 21/230 (9%)
Query: 139 QSNSTNNSSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKI 198
QS S +++ + +GG S F V ++ A+K V LE + EI
Sbjct: 21 QSMSVKGRIYSILKQIGSGGSS-KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 199 LRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNA 258
L +L + +R D+ Y+V E + DL L+ +
Sbjct: 80 LNKLQQHSDKIIR--------LYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERK 130
Query: 259 SIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKV 318
S + +L+ + H+ +H D+K +N L+ + G +KL DFG+A + ++V
Sbjct: 131 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQV 189
Query: 319 ITLWYRPPELL--LGEERYG--------PAIDVWSCGCILGELFVKKPLF 358
T+ Y PPE + + R P DVWS GCIL + K F
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 20/174 (11%)
Query: 193 VREIKILRQL-NHKNIVNL---------REIVTDK---SDALDF-RKDKGSFYLVFEYMD 238
+ E+K+L L NH NIVNL ++T+ D L+F R+ + SF
Sbjct: 92 MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC-----S 146
Query: 239 HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLAD 298
++E + + + S Q+ G+++ +N +HRD+ NIL+ + K+ D
Sbjct: 147 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 206
Query: 299 FGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
FGLAR + N + + + PE + Y DVWS G L ELF
Sbjct: 207 FGLARDIKNDSNYVVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELF 259
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 20/174 (11%)
Query: 193 VREIKILRQL-NHKNIVNL---------REIVTDK---SDALDF-RKDKGSFYLVFEYMD 238
+ E+K+L L NH NIVNL ++T+ D L+F R+ + SF
Sbjct: 97 MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC-----S 151
Query: 239 HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLAD 298
++E + + + S Q+ G+++ +N +HRD+ NIL+ + K+ D
Sbjct: 152 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 211
Query: 299 FGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
FGLAR + N + + + PE + Y DVWS G L ELF
Sbjct: 212 FGLARDIKNDSNYVVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELF 264
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
++ DG++Y + + F+HRD+ N ++ + VK+ DFG+ R D R ++ +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL 351
+ PE L + + + D+WS G +L E+
Sbjct: 198 WMAPE-SLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 89/218 (40%), Gaps = 25/218 (11%)
Query: 154 LAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLN-HKNIVNLRE 212
L G + ++L T + A+K + E + RE+++L Q H+N++ L E
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKII--EKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 213 IVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCH 272
++ FYLVFE M + FNE+ + +++ + L + H
Sbjct: 79 FFEEED----------RFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLH 128
Query: 273 KRNFLHRDIKCSNILM---NNRGEVKLADFGLARLYNAEDRQRPYTNKVI-----TLWYR 324
+ HRD+K NIL N VK+ DFGL P + + + Y
Sbjct: 129 NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYM 188
Query: 325 PPELL--LGEER--YGPAIDVWSCGCILGELFVKKPLF 358
PE++ EE Y D+WS G IL L P F
Sbjct: 189 APEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 66 GALDLLDKMLELDPERRITAEQALKSVWLKNVHPE-SMPPPQL 107
A DL+ K+L D ++R++A Q L+ W++ PE ++P P +
Sbjct: 271 AAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLPTPMV 313
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 20/174 (11%)
Query: 193 VREIKILRQL-NHKNIVNL---------REIVTDK---SDALDF-RKDKGSFYLVFEYMD 238
+ E+K+L L NH NIVNL ++T+ D L+F R+ + SF
Sbjct: 74 MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC-----S 128
Query: 239 HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLAD 298
++E + + + S Q+ G+++ +N +HRD+ NIL+ + K+ D
Sbjct: 129 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 188
Query: 299 FGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 352
FGLAR + N + + + PE + Y DVWS G L ELF
Sbjct: 189 FGLARDIKNDSNYVVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELF 241
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 18/190 (9%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDA--------LDFRK 225
VA+K ++L+N + + E ++ +H N++ L + + S L F K
Sbjct: 65 VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMK 124
Query: 226 DKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSN 285
G + Y LE+G M + G+ Y RNFLHRD+ N
Sbjct: 125 -YGDLHTYLLY------SRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARN 177
Query: 286 ILMNNRGEVKLADFGLA-RLYNAEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 344
++ + V +ADFGL+ ++Y+ + ++ K+ W L + Y DVW+
Sbjct: 178 CMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES--LADRVYTSKSDVWAF 235
Query: 345 GCILGELFVK 354
G + E+ +
Sbjct: 236 GVTMWEIATR 245
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 249 MVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNN---RGEVKLADFGLARLY 305
MV N+V +++Q+L+G+ Y H+ N +H D+K NIL+++ G++K+ DFG++R
Sbjct: 127 MVSENDV--IRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI 184
Query: 306 NAEDRQRPYTNKVITLWYRPPELLLGEERYGP---AIDVWSCGCI 347
R T Y PE+L Y P A D+W+ G I
Sbjct: 185 GHACELREIMG---TPEYLAPEIL----NYDPITTATDMWNIGII 222
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 57 REEFSLMPPGALDLLDKMLELDPERRITAEQALKSVWLKN------VHPE 100
E FS + A D + +L +PE+R TAE L WL+ HPE
Sbjct: 254 EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPE 303
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 94/230 (40%), Gaps = 21/230 (9%)
Query: 139 QSNSTNNSSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKI 198
QS S +++ + +GG S F V ++ A+K V LE + EI
Sbjct: 21 QSMSVKGRIYSILKQIGSGGSS-KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 199 LRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNA 258
L +L + +R D+ Y+V E + DL L+ +
Sbjct: 80 LNKLQQHSDKIIR--------LYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERK 130
Query: 259 SIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKV 318
S + +L+ + H+ +H D+K +N L+ + G +KL DFG+A + ++V
Sbjct: 131 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDXXXVVKDSQV 189
Query: 319 ITLWYRPPELL--LGEERYG--------PAIDVWSCGCILGELFVKKPLF 358
T+ Y PPE + + R P DVWS GCIL + K F
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
++ DG++Y + + F+HRD+ N ++ + VK+ DFG+ R D R ++ +
Sbjct: 137 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL 351
+ PE L + + + D+WS G +L E+
Sbjct: 197 WMAPE-SLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 79/179 (44%), Gaps = 41/179 (22%)
Query: 195 EIKILRQLNHK-NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMV-- 250
E+++L +L H NI+NL L + +G YL EY H +L+ L V
Sbjct: 75 ELEVLCKLGHHPNIINL----------LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLE 124
Query: 251 ---DFNEVNN-ASIM--RQLLD-------GLSYCHKRNFLHRDIKCSNILMNNRGEVKLA 297
F N+ AS + +QLL G+ Y ++ F+HRD+ NIL+ K+A
Sbjct: 125 TDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 184
Query: 298 DFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEER-----YGPAIDVWSCGCILGEL 351
DFGL+R Q Y K + R P + E Y DVWS G +L E+
Sbjct: 185 DFGLSR------GQEVYVKKTMG---RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 234
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 231 YLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN- 289
+++ + DL + E+ F+ + ++LD L Y H+ ++H DIK SN+L+N
Sbjct: 128 FMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY 187
Query: 290 -NRGEVKLADFGLARLYNAEDRQRPYT 315
N +V L D+GLA Y E + Y
Sbjct: 188 KNPDQVYLVDYGLAYRYCPEGVHKAYA 214
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 79/179 (44%), Gaps = 41/179 (22%)
Query: 195 EIKILRQLNHK-NIVNLREIVTDKSDALDFRKDKGSFYLVFEYMDH-DLMGLLESGMV-- 250
E+++L +L H NI+NL L + +G YL EY H +L+ L V
Sbjct: 65 ELEVLCKLGHHPNIINL----------LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLE 114
Query: 251 ---DFNEVNN-ASIM--RQLLD-------GLSYCHKRNFLHRDIKCSNILMNNRGEVKLA 297
F N+ AS + +QLL G+ Y ++ F+HRD+ NIL+ K+A
Sbjct: 115 TDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 174
Query: 298 DFGLARLYNAEDRQRPYTNKVITLWYRPPELLLGEER-----YGPAIDVWSCGCILGEL 351
DFGL+R Q Y K + R P + E Y DVWS G +L E+
Sbjct: 175 DFGLSR------GQEVYVKKTMG---RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 224
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 24/180 (13%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
A+KKVRLE + V E+ L+ IV L V + G + +
Sbjct: 86 CAVKKVRLE-------VFRVEELVACAGLSSPRIVPLYGAVRE-----------GPWVNI 127
Query: 234 F-EYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRG 292
F E ++ +G L M E + Q L+GL Y H R LH D+K N+L+++ G
Sbjct: 128 FMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDG 187
Query: 293 E-VKLADFGLARLYNAEDRQRP-YTNKVI--TLWYRPPELLLGEERYGPAIDVWSCGCIL 348
L DFG A + + T I T + PE+++G+ +D+WS C++
Sbjct: 188 SRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-CDAKVDIWSSCCMM 246
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 24/180 (13%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
A+KKVRLE + V E+ L+ IV L V + G + +
Sbjct: 102 CAVKKVRLE-------VFRVEELVACAGLSSPRIVPLYGAVRE-----------GPWVNI 143
Query: 234 F-EYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRG 292
F E ++ +G L M E + Q L+GL Y H R LH D+K N+L+++ G
Sbjct: 144 FMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDG 203
Query: 293 E-VKLADFGLARLYNAEDRQRP-YTNKVI--TLWYRPPELLLGEERYGPAIDVWSCGCIL 348
L DFG A + + T I T + PE+++G+ +D+WS C++
Sbjct: 204 SRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-CDAKVDIWSSCCMM 262
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 104/267 (38%), Gaps = 62/267 (23%)
Query: 145 NSSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNH 204
N ++ L G S S + + VA+K V+ E + TA+ EI++L+ + +
Sbjct: 20 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK---SAEHYTETALDEIRLLKSVRN 76
Query: 205 KNIVNL-REIVTDKSDALDFRKDKGS-FYLVFEYMDHDLMG-LLESGMVDFNEVNNASIM 261
+ + RE+V D G+ +VFE + H L+ +++S I+
Sbjct: 77 SDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKII 136
Query: 262 RQLLDGLSYCHKR-NFLHRDIKCSNILMN------------------------------- 289
+Q+L GL Y H + +H DIK NIL++
Sbjct: 137 QQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVST 196
Query: 290 ------------------NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLG 331
+ +VK+AD G NA + +T + T YR E+L+G
Sbjct: 197 APATAGNFLVNPLEPKNAEKLKVKIADLG-----NACWVHKHFTEDIQTRQYRSLEVLIG 251
Query: 332 EERYGPAIDVWSCGCILGELFVKKPLF 358
PA D+WS C+ EL LF
Sbjct: 252 SGYNTPA-DIWSTACMAFELATGDYLF 277
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 66 GALDLLDKMLELDPERRITAEQALKSVWLKN 96
G D L MLEL PE+R TA + L+ WL +
Sbjct: 351 GFTDFLLPMLELIPEKRATAAECLRHPWLNS 381
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
++ DG++Y + F+HRD+ N ++ VK+ DFG+ R D R ++ +
Sbjct: 140 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 199
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL 351
+ PE L + + DVWS G +L E+
Sbjct: 200 WMSPE-SLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 24/180 (13%)
Query: 174 VALKKVRLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLV 233
A+KKVRLE + V E+ L+ IV L V + G + +
Sbjct: 100 CAVKKVRLE-------VFRVEELVACAGLSSPRIVPLYGAVRE-----------GPWVNI 141
Query: 234 F-EYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRG 292
F E ++ +G L M E + Q L+GL Y H R LH D+K N+L+++ G
Sbjct: 142 FMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDG 201
Query: 293 E-VKLADFGLARLYNAEDRQRP-YTNKVI--TLWYRPPELLLGEERYGPAIDVWSCGCIL 348
L DFG A + + T I T + PE+++G+ +D+WS C++
Sbjct: 202 SRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-CDAKVDIWSSCCMM 260
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
++ DG++Y + F+HRD+ N ++ VK+ DFG+ R D R ++ +
Sbjct: 131 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL 351
+ PE L + + DVWS G +L E+
Sbjct: 191 WMSPE-SLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 8/174 (4%)
Query: 180 RLENEKEGFPITAVREIKILRQLNHKNIVNLREIVTDKSDALDFRKDKGSFYLVF-EYMD 238
R+E+++ GF AV++++ L + ++ + + + L +G + +F E ++
Sbjct: 111 RMEDKQTGFQC-AVKKVR-LEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLE 168
Query: 239 HDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMNNRG-EVKLA 297
+G L E + Q L+GL Y H R LH D+K N+L+++ G L
Sbjct: 169 GGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALC 228
Query: 298 DFGLARLYNAEDRQRP-YTNKVI--TLWYRPPELLLGEERYGPAIDVWSCGCIL 348
DFG A + + T I T + PE++LG +DVWS C++
Sbjct: 229 DFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS-CDAKVDVWSSCCMM 281
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 104/267 (38%), Gaps = 62/267 (23%)
Query: 145 NSSRPLMEPLAAGGLSLNNFSVSLFTDELVALKKVRLENEKEGFPITAVREIKILRQLNH 204
N ++ L G S S + + VA+K V+ E + TA+ EI++L+ + +
Sbjct: 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK---SAEHYTETALDEIRLLKSVRN 92
Query: 205 KNIVNL-REIVTDKSDALDFRKDKGS-FYLVFEYMDHDLMG-LLESGMVDFNEVNNASIM 261
+ + RE+V D G+ +VFE + H L+ +++S I+
Sbjct: 93 SDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKII 152
Query: 262 RQLLDGLSYCHKR-NFLHRDIKCSNILMN------------------------------- 289
+Q+L GL Y H + +H DIK NIL++
Sbjct: 153 QQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVST 212
Query: 290 ------------------NRGEVKLADFGLARLYNAEDRQRPYTNKVITLWYRPPELLLG 331
+ +VK+AD G NA + +T + T YR E+L+G
Sbjct: 213 APATAGNFLVNPLEPKNAEKLKVKIADLG-----NACWVHKHFTEDIQTRQYRSLEVLIG 267
Query: 332 EERYGPAIDVWSCGCILGELFVKKPLF 358
PA D+WS C+ EL LF
Sbjct: 268 SGYNTPA-DIWSTACMAFELATGDYLF 293
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 66 GALDLLDKMLELDPERRITAEQALKSVWLKN 96
G D L MLEL PE+R TA + L+ WL +
Sbjct: 367 GFTDFLLPMLELIPEKRATAAECLRHPWLNS 397
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 220 ALDFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHR 279
L + K +++ + DL + E+ F+ + ++LD L Y H+ ++H
Sbjct: 117 GLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHG 176
Query: 280 DIKCSNILMN--NRGEVKLADFGLARLYNAEDRQRPY 314
DIK SN+L+N N +V L D+GLA Y E + Y
Sbjct: 177 DIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEY 213
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 231 YLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILMN- 289
+++ + DL + E+ F+ + ++LD L Y H+ ++H DIK SN+L+N
Sbjct: 128 FMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY 187
Query: 290 -NRGEVKLADFGLARLYNAEDRQRPY 314
N +V L D+GLA Y E + Y
Sbjct: 188 KNPDQVYLVDYGLAYRYCPEGVHKEY 213
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 24/190 (12%)
Query: 168 LFTDELVALKKVRLENEKEGFPITAVREIKILRQLN-HKNIVNLREIVTDKSDALDFRKD 226
+F + VA+K++ E F A RE+++LR+ + H N++ R T+K D
Sbjct: 45 MFDNRDVAVKRIL----PECFSF-ADREVQLLRESDEHPNVI--RYFCTEK--------D 89
Query: 227 KGSFYLVFEYMDHDLMGLLESGMVDFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNI 286
+ Y+ E L +E + ++++Q GL++ H N +HRD+K NI
Sbjct: 90 RQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNI 149
Query: 287 LM---NNRGEVK--LADFGLARLYNAEDRQRPYTNKVI-TLWYRPPELLLGEERYGP--A 338
L+ N G++K ++DFGL + + V T + PE+L + + P
Sbjct: 150 LISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYT 209
Query: 339 IDVWSCGCIL 348
+D++S GC+
Sbjct: 210 VDIFSAGCVF 219
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 195 EIKIL-RQLNHKNIVNLREIVTDKSDALDFRKDKGSF-YLVFEYMDHD--LMGLLESGMV 250
EI+IL R H NI+ L+++ D G + Y+V E L +L
Sbjct: 65 EIEILLRYGQHPNIITLKDVY-----------DDGKYVYVVTELXKGGELLDKILRQKF- 112
Query: 251 DFNEVNNASIMRQLLDGLSYCHKRNFLHRDIKCSNILM----NNRGEVKLADFGLARLYN 306
F+E ++++ + + Y H + +HRD+K SNIL N +++ DFG A+
Sbjct: 113 -FSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171
Query: 307 AEDRQRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 348
AE+ T + PE +L + Y A D+WS G +L
Sbjct: 172 AENGL--LXTPCYTANFVAPE-VLERQGYDAACDIWSLGVLL 210
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 25/120 (20%)
Query: 48 PKKIHRRRLREEFSL-------MPPGALDLLDKMLELDPERRITAEQALKSVWLKNVHPE 100
P++I R +FSL + A DL+ K L +DP +R+TA L+ W+ VH +
Sbjct: 228 PEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI--VHWD 285
Query: 101 SMPPPQLPTWQDCHELWSKKRRRQLRGDPMEMQAAAPIQSNSTNNSSRPLMEPLAAGGLS 160
+P QL QD P ++ A ++ N + P++EP+ L+
Sbjct: 286 QLPQYQL-NRQDA---------------PHLVKGAXAATYSALNRNQSPVLEPVGRSTLA 329
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 263 QLLDGLSYCHKRNFLHRDIKCSNILMNNRGEVKLADFGLARLYNAEDRQRPYTNKVITLW 322
Q+ G+ Y +R +HRD+ N+L+ + VK+ DFGLARL ++++ + +
Sbjct: 125 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK 184
Query: 323 YRPPELLLGEERYGPAIDVWSCGCILGEL--FVKKP 356
+ E + ++ DVWS G + EL F KP
Sbjct: 185 WMALE-CIHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,257,877
Number of Sequences: 62578
Number of extensions: 466930
Number of successful extensions: 3805
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 951
Number of HSP's gapped (non-prelim): 1579
length of query: 358
length of database: 14,973,337
effective HSP length: 100
effective length of query: 258
effective length of database: 8,715,537
effective search space: 2248608546
effective search space used: 2248608546
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)