RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy13989
(85 letters)
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 125 bits (316), Expect = 6e-37
Identities = 50/66 (75%), Positives = 58/66 (87%), Gaps = 2/66 (3%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP- 238
Query: 73 AGVKGL 78
+ L
Sbjct: 239 -DMCSL 243
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 117 bits (297), Expect = 1e-34
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
AP++L G++ Y ID+W+VGCI E++ P PG S+ DQL RIF+ LGTP+ WP
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP- 226
Query: 73 AGVKGL 78
V L
Sbjct: 227 -NVTEL 231
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 118 bits (298), Expect = 2e-34
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
AP++L G++ Y +D+W++GCI E++ P PG +D DQL +IF LGTP+ WP
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWP- 245
Query: 73 AGVKGL 78
V+ L
Sbjct: 246 -QVQEL 250
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 117 bits (296), Expect = 3e-34
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
APE+L GA+ Y +D+W++GCI E++ + PG+S++DQL RIF+TLGTP E WP
Sbjct: 171 APEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP- 229
Query: 73 AGVKGL 78
GV +
Sbjct: 230 -GVTSM 234
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 117 bits (296), Expect = 3e-34
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
+PELL G YG +D+WA+GC+ ELL P PG+SD+DQL I +TLG
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQ- 228
Query: 73 AGVKGL 78
Sbjct: 229 -VFSTN 233
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 117 bits (296), Expect = 4e-34
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
AP++L G+R Y ID+W+ GCI+ E++ P PG +D +QL IF +GTP+E WP
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWP- 234
Query: 73 AGVKGL 78
V L
Sbjct: 235 -SVTKL 239
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 117 bits (296), Expect = 4e-34
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
P++L G+ Y IDMW VGCI E+ P PG + +QL IF+ LGTP+E+TWP
Sbjct: 168 PPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWP- 226
Query: 73 AGVKGL 78
G+
Sbjct: 227 -GILSN 231
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 116 bits (294), Expect = 8e-34
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
PE+L G+R Y +D+W++ CI E+L+K P PG+S++DQL +IF+ LG P + TWP
Sbjct: 205 PPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP- 263
Query: 73 AGVKGL 78
GV L
Sbjct: 264 -GVTAL 268
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 115 bits (291), Expect = 3e-33
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 71
APELL G YG +D+WA+GC++ E+ + P PG+SD+DQL I LG
Sbjct: 192 APELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQE 250
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 114 bits (287), Expect = 1e-32
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
PELL G R YG ID+W GCI+ E+ ++P + G ++ QL I Q G+ + + WP
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP- 254
Query: 73 AGVKGL 78
V
Sbjct: 255 -NVDNY 259
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 111 bits (281), Expect = 4e-32
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 71
P++LFGA++Y IDMW+ GCI EL P PG DQL RIF+ LGTP+E+ WP
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228
Query: 72 TAGVKGL 78
+ L
Sbjct: 229 --SMTKL 233
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 111 bits (280), Expect = 6e-32
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
APE+L + Y +DMW+VGCI E+ + P G S+ DQL +IF +G P ED WP
Sbjct: 187 APEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP- 244
Query: 73 AGVKGL 78
L
Sbjct: 245 -RDVSL 249
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 110 bits (278), Expect = 2e-31
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
APE+L + Y +D+W+VGCI E+ + P G SD+DQL +I +G P E+ WP
Sbjct: 187 APEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP- 244
Query: 73 AGVKGL 78
L
Sbjct: 245 -RDVAL 249
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 107 bits (268), Expect = 1e-29
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD---------LDQLTRIFQTLG 63
APELL GAR Y ID+WA+GCI ELL P + DQL RIF +G
Sbjct: 203 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 262
Query: 64 TPSEDTWPTAGVKGL 78
P++ W +K +
Sbjct: 263 FPADKDWE--DIKKM 275
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 106 bits (267), Expect = 2e-29
Identities = 30/60 (50%), Positives = 39/60 (65%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
APEL+FGA Y ID+W+ GC++ EL+ P PGES +DQL I + LGTPS + T
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT 268
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 107 bits (268), Expect = 2e-29
Identities = 29/60 (48%), Positives = 39/60 (65%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
APEL+FGA Y ID+W+ GC++ ELLL P PG+S +DQL I + LGTP+ +
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 283
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 100 bits (252), Expect = 2e-27
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
APEL+FG + Y +D+W+VGCI E++L P G++ QL I + LG PS +
Sbjct: 199 APELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRK 258
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 99.8 bits (249), Expect = 5e-27
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
APEL+ GA Y ID+W++GC+ EL+L P GE+ +DQL RI Q +GTP+++
Sbjct: 209 APELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIR 268
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 94.3 bits (235), Expect = 3e-25
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDT 69
F PELL +MY +DMW++GC++ ++ K PF G + DQL RI + LGT
Sbjct: 196 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 255
Query: 70 WP 71
+
Sbjct: 256 YI 257
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 90.9 bits (226), Expect = 1e-23
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
APE+L G+ Y GIDMW++GCI+ E+L P PG S ++QL RI + PS +
Sbjct: 198 APEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNED 254
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 88.5 bits (220), Expect = 5e-23
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
+P LL Y IDMWA GCI E+L G +L+Q+ I +++ E+
Sbjct: 192 SPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEED 248
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 88.5 bits (220), Expect = 8e-23
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
APEL+ + + +DMW+ GC++ E+ + G + +QL +I + +GTP +
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIED 257
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 87.8 bits (218), Expect = 1e-22
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
APE++ Y +D+W+VGCI+ ELL PG +DQL I + +GTP +
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 253
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 87.4 bits (217), Expect = 2e-22
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
APE++ Y +D+W+VGCI+ E++ G LDQL I + GTP +
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 249
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 87.3 bits (217), Expect = 2e-22
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
APE++ ++ Y ID+W+VGCI+ E+L P PG+ LDQL I LG+PS++
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 87.0 bits (216), Expect = 2e-22
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
APE++ Y +D+W+VGCI+ E+L G+ LDQLT+I + G P +
Sbjct: 191 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF 247
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 86.9 bits (216), Expect = 3e-22
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
APE++ + Y +D+W+ GCI+ EL L+ P PG QL IF +GTP D
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 83.7 bits (207), Expect = 6e-21
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
APE++ G Y +D+W+VGCI+ E++ PG +DQ ++ + LGTP +
Sbjct: 231 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 286
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 82.4 bits (204), Expect = 1e-20
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
APE++ G Y +D+W+VGCI+ E++ PG +DQ ++ + LGTP +
Sbjct: 194 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF 249
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 78.3 bits (193), Expect = 6e-19
Identities = 29/90 (32%), Positives = 35/90 (38%), Gaps = 31/90 (34%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKA-----------PFLPGES----------- 50
APEL+ Y ID+W++GCI ELL P PG S
Sbjct: 251 APELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAG 310
Query: 51 ---------DLDQLTRIFQTLGTPSEDTWP 71
+ DQL IF LGTPSE+
Sbjct: 311 NDFKFHTRGNRDQLNVIFNILGTPSEEDIE 340
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 74.4 bits (183), Expect = 1e-17
Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 28/85 (32%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLL-----------KAPFLPGESD---------- 51
APEL+ Y ID+W+ GCI ELL + P PG S
Sbjct: 219 APELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSK 278
Query: 52 -------LDQLTRIFQTLGTPSEDT 69
DQL IF +GTP+ED
Sbjct: 279 KVHEKSNRDQLNIIFNIIGTPTEDD 303
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 72.1 bits (177), Expect = 1e-16
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
APE++ GAR YG+ IDMW++GCI+ ELL P LPGE + DQL + + LG PS+
Sbjct: 267 APEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQK 321
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 71.3 bits (175), Expect = 2e-16
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
+PE+L G Y + IDMW++GCI+ E+ P G +++DQ+ +I + LG P
Sbjct: 226 SPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAH 280
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 66.2 bits (162), Expect = 1e-14
Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
PE++ + D+W++GCI+ E + + L + + LG
Sbjct: 207 PPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSH 261
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 65.4 bits (160), Expect = 2e-14
Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
APE++ + V DMW+ GC++ EL + ++ L + + ++
Sbjct: 227 APEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKN 281
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 64.2 bits (157), Expect = 5e-14
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
APE++ + D+W++GCI+ E L P + L + + LG +
Sbjct: 202 APEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKH 256
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 57.0 bits (138), Expect = 2e-11
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES------DLDQLTRIFQTLGTP 65
+PE+L GA +G G D+W+ C+I EL+ + D D + +I + LG
Sbjct: 203 SPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGEL 260
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 46.2 bits (110), Expect = 1e-07
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 12 MAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 71
+A E+L G Y IDM+++G I E++ PF G ++ L ++ D
Sbjct: 197 VATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRSVSIEFPPDFDD 254
Query: 72 T 72
Sbjct: 255 N 255
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 44.5 bits (105), Expect = 5e-07
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 7/67 (10%)
Query: 10 AFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLP-----GESDLDQLTRIFQTLG 63
+ + E+L G+ Y D+W+ C+ EL F P D D + I + LG
Sbjct: 258 QYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLG 316
Query: 64 TPSEDTW 70
Sbjct: 317 KVPRKLI 323
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 43.7 bits (103), Expect = 8e-07
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRIFQTLGTPS-- 66
F APE+ G + G DMW+VG ++ +LL +PF GE+D + L + +
Sbjct: 322 FAAPEVAEG-KPVGYYTDMWSVG-VLSYILLSGLSPFG-GENDDETLRNVKS--CDWNMD 376
Query: 67 EDTWPT 72
+ +
Sbjct: 377 DSAFSG 382
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 42.4 bits (100), Expect = 2e-06
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPF 45
+++PE+ + Y D+WA+GC++ EL LK F
Sbjct: 191 YLSPEICEN-KPYNNKSDIWALGCVLYELCTLKHAF 225
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 41.5 bits (98), Expect = 5e-06
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPF 45
+M+PE + Y D+W++GC++ EL L PF
Sbjct: 182 YMSPEQMNR-MSYNEKSDIWSLGCLLYELCALMPPF 216
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 41.6 bits (98), Expect = 5e-06
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRI 58
F APE++ G DMWA+G ++ +LL +PF GE DL+ L +
Sbjct: 216 FAAPEIVDR-EPVGFYTDMWAIG-VLGYVLLSGLSPFA-GEDDLETLQNV 262
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 41.1 bits (97), Expect = 7e-06
Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 9/66 (13%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRIFQTLGTPS-- 66
+ APE+ + DMW++G + +LL PFL E++ + I +
Sbjct: 169 YYAPEVHQH-DVVSTATDMWSLG-TLVYVLLSGINPFL-AETNQQIIENIMN--AEYTFD 223
Query: 67 EDTWPT 72
E+ +
Sbjct: 224 EEAFKE 229
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 40.8 bits (95), Expect = 1e-05
Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 12/70 (17%)
Query: 10 AFMAPELL----------FGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRI 58
F PEL + D WA+G +I + P ++ L I
Sbjct: 267 GFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPI-TKDAALGGSEWI 325
Query: 59 FQTLGTPSED 68
F++ +
Sbjct: 326 FRSCKNIPQP 335
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 40.6 bits (95), Expect = 1e-05
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 12 MAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI 58
M+PE + G Y +D++++G I+ ELL F + +T +
Sbjct: 243 MSPEQIHG-NNYSHKVDIFSLGLILFELL--YSFSTQMERVRIITDV 286
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 40.3 bits (94), Expect = 1e-05
Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 10 AFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSED 68
F E+L + + ID + V + +L + E + +F+ P D
Sbjct: 250 GFQCVEMLSN-KPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFR--RLPHLD 306
Query: 69 TW 70
W
Sbjct: 307 MW 308
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 40.4 bits (94), Expect = 1e-05
Identities = 10/63 (15%), Positives = 19/63 (30%), Gaps = 3/63 (4%)
Query: 11 FMAPELLFG-ARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSED 68
+ E L + ++ W +G I + PF + + L P D
Sbjct: 257 YAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPS-LRVPGTD 315
Query: 69 TWP 71
+
Sbjct: 316 SLA 318
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 40.0 bits (94), Expect = 1e-05
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 12 MAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQL 55
M+PE + Y D+W++GC++ E+ L++PF + +L L
Sbjct: 203 MSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL 246
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 40.1 bits (94), Expect = 2e-05
Identities = 9/39 (23%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 11 FMAPELLFGA--RMYGVGIDMWAVGCIICELLL--KAPF 45
++APE+L +D+++ GC+ ++ PF
Sbjct: 192 WIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF 230
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 40.0 bits (93), Expect = 2e-05
Identities = 10/64 (15%), Positives = 20/64 (31%), Gaps = 6/64 (9%)
Query: 10 AFMAPELLFGAR----MYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 64
A +L + + D W +G I + P ++ L IF++
Sbjct: 277 ETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPN-TDDAALGGSEWIFRSCKN 335
Query: 65 PSED 68
+
Sbjct: 336 IPQP 339
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 39.8 bits (93), Expect = 2e-05
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 11 FMAPELLFGA-RMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRI 58
F+APE+L YG D W+ G ++ LL PF PG +D D ++++
Sbjct: 240 FVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF-PGVNDADTISQV 288
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 39.6 bits (93), Expect = 2e-05
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 12 MAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI 58
M+PE + G Y +D++++G I+ ELL PF + LT +
Sbjct: 197 MSPEQIHG-NSYSHKVDIFSLGLILFELL--YPFSTQMERVRTLTDV 240
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 39.9 bits (93), Expect = 2e-05
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF-LPGESDLDQLTR 57
+MAPE+L Y D +++GC++ +LL +PF D ++ R
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 404
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 39.7 bits (93), Expect = 2e-05
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
++APE+L + Y D+W++G I+ LL P G++D + L ++ + T W
Sbjct: 204 YIAPEVL--RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEW 261
Query: 71 PT 72
Sbjct: 262 KN 263
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 39.4 bits (92), Expect = 3e-05
Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 11/79 (13%)
Query: 11 FMAPELLFGA----------RMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF 59
+M PE + D+W++GCI+ + K PF + + +L I
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 281
Query: 60 QTLGTPSEDTWPTAGVKGL 78
P ++ +
Sbjct: 282 DPNHEIEFPDIPEKDLQDV 300
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 39.3 bits (92), Expect = 3e-05
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRI 58
F+APE++ G+ DMW++G +I +LL +PFL G++ + L I
Sbjct: 184 FVAPEIVNY-EPLGLEADMWSIG-VITYILLSGASPFL-GDTKQETLANI 230
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 39.3 bits (92), Expect = 3e-05
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
++APE+L G Y D+W+ G I+ LL P G ++ D L ++ + T W
Sbjct: 194 YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 251
Query: 71 PT 72
Sbjct: 252 KK 253
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 39.2 bits (92), Expect = 3e-05
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRI 58
F+APE++ G+ DMW++G +I +LL +PFL G++ + L I
Sbjct: 184 FVAPEIVNY-EPLGLEADMWSIG-VITYILLSGASPFL-GDTKQETLANI 230
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 39.2 bits (92), Expect = 3e-05
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRIFQTLGTPSED 68
F+APE++ G+ DMW++G +I +LL +PFL G++ + L + ++
Sbjct: 183 FVAPEIVNY-EPLGLEADMWSIG-VITYILLSGASPFL-GDTKQETLANVSAVNYEFEDE 239
Query: 69 TWPT 72
+
Sbjct: 240 YFSN 243
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 38.9 bits (91), Expect = 4e-05
Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 11/79 (13%)
Query: 11 FMAPELLFG----------ARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF 59
+M PE + D+W++GCI+ + K PF + + +L I
Sbjct: 175 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 234
Query: 60 QTLGTPSEDTWPTAGVKGL 78
P ++ +
Sbjct: 235 DPNHEIEFPDIPEKDLQDV 253
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 38.9 bits (91), Expect = 4e-05
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRI 58
F+APE++ DMW+VG +I +LL +PFL G++D + L I
Sbjct: 254 FLAPEVVNY-DFVSFPTDMWSVG-VIAYMLLSGLSPFL-GDNDAETLNNI 300
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 38.6 bits (90), Expect = 5e-05
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ 60
FMAPELL G Y +D +A+G + E++ + PF + + + Q
Sbjct: 355 FMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPF-RARGEKVENKELKQ 403
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 38.7 bits (90), Expect = 6e-05
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 11/58 (18%)
Query: 12 MAPELLFGARM-------YGVGIDMWAVGCIICELLL-KAPFLP---GESDLDQLTRI 58
+ P++ A + YG +D+W++G PF P + + + +I
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 38.6 bits (90), Expect = 6e-05
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 11/58 (18%)
Query: 12 MAPELLFGARM-------YGVGIDMWAVGCIICELLL-KAPFLP---GESDLDQLTRI 58
+ P++ A + YG +D+W++G PF P + + + +I
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 38.4 bits (90), Expect = 6e-05
Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 11/59 (18%)
Query: 11 FMAPELLFGA----------RMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRI 58
+M PE + D+W++GCI+ + K PF + + +L I
Sbjct: 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 38.5 bits (89), Expect = 7e-05
Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 3/72 (4%)
Query: 12 MAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 71
+APELL + Y V +D W+ G + E + F P + + + +E
Sbjct: 190 LAPELLEQ-KKYTVTVDYWSFGTLAFECI--TGFRPFLPNWQPVQWHGKVREKSNEHIVV 246
Query: 72 TAGVKGLFSLIR 83
+ G
Sbjct: 247 YDDLTGAVKFSS 258
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 38.2 bits (89), Expect = 7e-05
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ 60
+MAPE++ R Y D WA+GC++ E++ ++PF + + +
Sbjct: 351 YMAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPF-QQRKKKIKREEVER 399
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 38.0 bits (89), Expect = 7e-05
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 12 MAPELLFGARMYGVGIDMWAVGCIICELL--LKAPF 45
M+PE + + YG +D++A+G I+ ELL F
Sbjct: 188 MSPEQISS-QDYGKEVDLYALGLILAELLHVCDTAF 222
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 38.2 bits (89), Expect = 8e-05
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 12 MAPELLFGA------RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ 60
APELL + R ID++++GC+ +L K P + + I +
Sbjct: 199 RAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG-KHPFGDKYSRESNIIR 252
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 38.1 bits (89), Expect = 9e-05
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDT 69
++APE+L Y D+W+ G I+ LL PF G+++ D L R+
Sbjct: 189 YIAPEVL--RGTYDEKCDVWSAGVILYILLSGTPPF-YGKNEYDILKRVETGKYAFDLPQ 245
Query: 70 WPT 72
W T
Sbjct: 246 WRT 248
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 38.0 bits (89), Expect = 9e-05
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRI 58
++APE+L DMW +G II +LL +PF+ GE + + I
Sbjct: 199 YLAPEILNY-DPITTATDMWNIG-IIAYMLLTHTSPFV-GEDNQETYLNI 245
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 37.8 bits (88), Expect = 9e-05
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDT 69
++APE+L Y D+W+ G I+ LL PF G++D D + ++ + +
Sbjct: 214 YIAPEVLKKK--YNEKCDVWSCGVIMYILLCGYPPF-GGQNDQDIIKKVEKGKYYFDFND 270
Query: 70 WPT 72
W
Sbjct: 271 WKN 273
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 37.9 bits (89), Expect = 1e-04
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELL 40
++APE+L + Y +D W++G I LL
Sbjct: 173 YVAPEVLAQ-KPYSKAVDCWSIGVITYILL 201
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 37.5 bits (88), Expect = 1e-04
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRI 58
F+APE++ G+ DMW++G +I +LL +PFL GE+ + LT I
Sbjct: 177 FVAPEIVNY-EPLGLEADMWSIG-VITYILLSGASPFL-GETKQETLTNI 223
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 37.3 bits (87), Expect = 1e-04
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRIF 59
FMAPE+ Y +D++A G + E+ + P+ S+ +I+
Sbjct: 196 FMAPEM--YEEKYDESVDVYAFGMCMLEMATSEYPY----SECQNAAQIY 239
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 37.3 bits (87), Expect = 1e-04
Identities = 6/29 (20%), Positives = 13/29 (44%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICEL 39
F+A E+L + D++A+ +
Sbjct: 196 FLANEVLQENYTHLPKADIFALALTVVCA 224
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 37.0 bits (86), Expect = 2e-04
Identities = 10/51 (19%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 11 FMAPELLFGARMYGVG--IDMWAVGCIICELL-LKAPFLPGESDLDQLTRI 58
+ APEL + D+W++GC++ ++ + P+ D +
Sbjct: 209 YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA 259
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 36.9 bits (86), Expect = 2e-04
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT----- 64
++APE+L G Y DMW++G I+ LL PF + + + +
Sbjct: 195 YVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGFPPFY-SNTGQAISPGMKRRIRLGQYGF 252
Query: 65 PSEDTWPT 72
P+ + W
Sbjct: 253 PNPE-WSE 259
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 36.8 bits (86), Expect = 2e-04
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 10 AFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
++ PE++ G RM+ +D+W++G + E L+ K PF
Sbjct: 172 DYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPF 207
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 36.5 bits (85), Expect = 3e-04
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELL--LKAPF 45
+MAPELL G+ YG D++++G I E+ ++ P
Sbjct: 222 YMAPELLQGS--YGTAADVFSLGLTILEVACNMELPH 256
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 36.1 bits (84), Expect = 3e-04
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ 60
F+APE+L + Y D+W++G ++ +L PF G D + I
Sbjct: 186 FVAPEVL-ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE--EILA 233
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 36.3 bits (84), Expect = 4e-04
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 10 AFMAPEL--LFGARMYGVGIDMWAVGCIICELL-LKAPF 45
+ PE+ L+ G D+WA+GCI+ L + PF
Sbjct: 215 MYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF 253
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 36.2 bits (84), Expect = 4e-04
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELL 40
+ APE+L G YG +DMW+VG I LL
Sbjct: 216 YCAPEILRGCA-YGPEVDMWSVGIITYILL 244
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 36.1 bits (84), Expect = 4e-04
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 10 AFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
++APE+L + + +D+W++GCI+ LL+ K PF
Sbjct: 206 NYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 241
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 36.0 bits (84), Expect = 4e-04
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
+PE+ +G+ D+W++GC+ LL+ + PF
Sbjct: 180 SPEIATR-SAHGLESDVWSLGCMFYTLLIGRPPF 212
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 35.6 bits (83), Expect = 6e-04
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 10 AFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
++APE+L + + +D+W++GCI+ LL+ K PF
Sbjct: 180 NYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 215
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 35.5 bits (82), Expect = 7e-04
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ 60
++APE+L G Y DMW++G I+ LL PF L +
Sbjct: 229 YVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFY-SNHGLAISPGMKT 277
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 35.4 bits (82), Expect = 8e-04
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCI 35
FMAPE++ YG +D+W G I
Sbjct: 199 FMAPEVVKR-EPYGKPVDVWGCGVI 222
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 34.6 bits (80), Expect = 0.001
Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCII 36
+++PE+L Y +D+WA G I+
Sbjct: 196 YLSPEVLKK-DPYSKPVDIWACGVIL 220
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 34.6 bits (80), Expect = 0.001
Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 15/80 (18%)
Query: 11 FMAPELL----FGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTP 65
+MAPE++ A +Y D+W++G I+ LL PF+ G D
Sbjct: 187 YMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV-GRCGSD---------CGW 236
Query: 66 SEDTWPTAGVKGLFSLIRAG 85
A LF I+ G
Sbjct: 237 DRGEACPACQNMLFESIQEG 256
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 34.6 bits (80), Expect = 0.001
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 11 FMAPELLFGARM-YGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ 60
+MAP+++ G + +D W++G ++ ELL +PF Q I +
Sbjct: 226 YMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ-AEISR 276
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 34.6 bits (79), Expect = 0.002
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
++APE++ YG +D WA G ++ E+L +APF
Sbjct: 508 YIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQAPF 542
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 34.2 bits (79), Expect = 0.002
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELL 40
+ APELL Y D+W++G I+ +L
Sbjct: 175 YAAPELL-NQNGYDESCDLWSLGVILYTML 203
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 33.9 bits (78), Expect = 0.002
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Query: 10 AFMAPELLFGARMY-GVGIDMWAVGCIICELLL-KAPFLPGESDLDQL 55
FM PE Y G +D+W++G + + PF + L +L
Sbjct: 215 EFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS-LKISLVEL 261
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 34.2 bits (79), Expect = 0.002
Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCII 36
+++PE+L YG +D+WA G I+
Sbjct: 179 YLSPEVLRK-DPYGKPVDLWACGVIL 203
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 33.9 bits (78), Expect = 0.002
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 12 MAPELLFGA--RMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRI 58
+APE+L Y +D W++G I+ L PF + + +I
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 357
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 33.7 bits (78), Expect = 0.002
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRI 58
+MAPE+ R D+W+ G ++ LL PF G S + +
Sbjct: 192 YMAPEVF--KRDVTFKCDIWSAGVVMYFLLTGCLPFT-GTSLEEVQQKA 237
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 33.8 bits (78), Expect = 0.002
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 11 FMAPELLFGA-RMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQ 54
+MAPE++ R YG D+W++GC I E+ K PF +L +
Sbjct: 189 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF----YELGE 230
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 33.7 bits (78), Expect = 0.003
Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 10 AFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
++ PE++ G + + +D+W G + E L+ PF
Sbjct: 177 DYLPPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPF 212
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 33.9 bits (78), Expect = 0.003
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Query: 11 FMAPELLFGA-----RMYGVGIDMWAVGCI 35
++APE+L + YG +D+WA G I
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVI 294
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 33.7 bits (78), Expect = 0.003
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 12 MAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
++PELL D+WA+GCII +L+ PF
Sbjct: 199 VSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPF 232
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 33.7 bits (78), Expect = 0.003
Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCII 36
+++PE+L Y +D+WA G I+
Sbjct: 173 YLSPEVLKK-DPYSKPVDIWACGVIL 197
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 33.5 bits (77), Expect = 0.003
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESD 51
++APE+L G YG +D WA+G ++ E++ ++PF S
Sbjct: 219 YIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS 259
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 33.4 bits (77), Expect = 0.003
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 9 KAFMAPELLF--GARMYGVGIDMWAVGCIICELLL-KAPF-LPGESDLDQLTRIFQT 61
K +MAPE+ Y +D W++G ELL + P+ + + ++ F+T
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET 234
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 33.4 bits (77), Expect = 0.003
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Query: 11 FMAPELLFGA-----RMYGVGIDMWAVGCIICELL 40
++APE++ + YG +DMW+ G I+ LL
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 223
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 33.4 bits (77), Expect = 0.004
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESD 51
++APE+L G YG +D WA+G ++ E++ ++PF S
Sbjct: 176 YIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSS 216
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 33.0 bits (76), Expect = 0.005
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
Query: 12 MAPELLFGA--RMYGVGIDMWAVGCI--IC 37
+APE+L Y +D W++G I IC
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 32.6 bits (75), Expect = 0.006
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
++APE+L YG +D WA+G ++ E+L APF
Sbjct: 190 YIAPEILQEML-YGPAVDWWAMGVLLYEMLCGHAPF 224
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 32.6 bits (75), Expect = 0.007
Identities = 13/36 (36%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
++APE+L G + Y +D W+ G ++ E+L+ ++PF
Sbjct: 184 YIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPF 218
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 32.6 bits (75), Expect = 0.007
Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ 60
A E Y DMW++G I+ LL PF L +
Sbjct: 167 AKETT--GEKYDKSCDMWSLGVIMYILLCGYPPFY-SNHGLAISPGMKT 212
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 32.6 bits (75), Expect = 0.007
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Query: 12 MAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ-TLGTPSEDT 69
+APE+L Y D+W+ G I+ LL PF G+++ D L R+
Sbjct: 190 IAPEVL--RGTYDEKCDVWSAGVILYILLSGTPPF-YGKNEYDILKRVETGKYAFDLPQ- 245
Query: 70 WPT 72
W T
Sbjct: 246 WRT 248
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 32.6 bits (75), Expect = 0.007
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
++APE+L YG +D W +G ++ E++ + PF
Sbjct: 171 YLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPF 205
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 32.4 bits (74), Expect = 0.008
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Query: 11 FMAPELL----FGARMYGVGIDMWAVGCIICELLL-KAPF 45
+++PE+L G YG D W++G + E+L + PF
Sbjct: 242 YISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 32.2 bits (74), Expect = 0.008
Identities = 9/30 (30%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELL 40
+++P++L +YG D W+ G ++ LL
Sbjct: 174 YVSPQVL--EGLYGPECDEWSAGVMMYVLL 201
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 32.5 bits (75), Expect = 0.008
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
+MAPE+L + +D W++G ++ ++L PF
Sbjct: 187 YMAPEILMR-SGHNRAVDWWSLGALMYDMLTGAPPF 221
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 32.4 bits (74), Expect = 0.008
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
++APE+L YG +D W +G ++ E++ + PF
Sbjct: 315 YLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPF 349
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 32.1 bits (74), Expect = 0.009
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
+MAPE++ R + D W+ G ++ E+L PF
Sbjct: 192 YMAPEVVNR-RGHTQSADWWSFGVLMFEMLTGTLPF 226
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 32.2 bits (74), Expect = 0.009
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
++APE++ YG +D WA G ++ E+L +APF
Sbjct: 187 YIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQAPF 221
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 32.0 bits (73), Expect = 0.011
Identities = 10/49 (20%), Positives = 21/49 (42%), Gaps = 6/49 (12%)
Query: 12 MAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF 59
MAPE++ G +D+W+ C++ +L P+ + +
Sbjct: 223 MAPEVVMGKP-CDAKVDIWSSCCMMLHMLNGCHPW----TQYFRGPLCL 266
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 32.0 bits (73), Expect = 0.011
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 7/42 (16%)
Query: 11 FMAPELL------FGARMYGVGIDMWAVGCIICELLL-KAPF 45
+++PE+L G YG D WA+G E+ + PF
Sbjct: 229 YLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 31.8 bits (73), Expect = 0.012
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
++APE+L + Y +D W +G ++ E+L PF
Sbjct: 205 YLAPEVLHK-QPYDRTVDWWCLGAVLYEMLYGLPPF 239
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 31.8 bits (71), Expect = 0.014
Identities = 6/49 (12%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
Query: 23 YGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 71
Y + + C++ + G+ D I++ + + + W
Sbjct: 226 YTLSRLERDGIVVFCDVSMDEDLFTGDG--DYQFDIYRLMKKENNNRWG 272
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 31.9 bits (73), Expect = 0.014
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 10 AFMAPELLFGA-RMY-GVGIDMWAVGCI 35
AFMAPE L +++ G +D+WA+G
Sbjct: 202 AFMAPESLSETRKIFSGKALDVWAMGVT 229
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 31.2 bits (71), Expect = 0.020
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 11 FMAPELLF---GARMYGVGIDMWAVGCIICELLL-KAPF 45
+++PE+L G YG D W+VG + E+L+ PF
Sbjct: 235 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 31.4 bits (71), Expect = 0.021
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 12 MAPELLF-GARMYGVGIDMWAVGCIICELL-LKAPF 45
++PE+L + Y D+++VG CEL PF
Sbjct: 202 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPF 237
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 31.4 bits (71), Expect = 0.023
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 9 KAFMAPELLFGARMYGVGIDMWAVGCIICEL-LLKAPFLPGESDLDQLTRIFQTLGTPSE 67
+++M+PE L G Y V D+W++G + E+ + + P P ++ +L Q G +E
Sbjct: 194 RSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 252
Query: 68 DT 69
Sbjct: 253 TP 254
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 29.9 bits (68), Expect = 0.057
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 10 AFMAPELLFGARMY-GVGIDMWAVGCIICELLLKAPFLP 47
AF PE+ G + G +D+W+ G + + P
Sbjct: 176 AFQPPEIANGLDTFSGFKVDIWSAGVTLYNIT--TGLYP 212
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 28.8 bits (65), Expect = 0.15
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 11 FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
+APE++ Y +D WA+G +I E+ PF
Sbjct: 204 ALAPEIILSKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 28.4 bits (64), Expect = 0.18
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 14/86 (16%)
Query: 5 KKVRKAF------MAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTR 57
KVRK F MAPE++ R Y D+W+ G EL AP+ +
Sbjct: 180 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY----HKYPPMKV 235
Query: 58 IFQTL--GTPS-EDTWPTAGVKGLFS 80
+ TL PS E + +
Sbjct: 236 LMLTLQNDPPSLETGVQDKEMLKKYG 261
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 27.9 bits (63), Expect = 0.28
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 12 MAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
+APE++ Y ID W+ G +I E+L PF
Sbjct: 170 IAPEVVSTKP-YNKSIDWWSFGILIYEMLAGYTPF 203
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 27.8 bits (62), Expect = 0.33
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 12 MAPELLFGARMYGVG-----IDMWAVGCIICELL 40
MAPE+L + D++A+G + E+
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 27.7 bits (62), Expect = 0.33
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 12 MAPELLFGARMYGVG-----IDMWAVGCIICELL 40
MAPE+L + D++A+G + E+
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 27.8 bits (62), Expect = 0.33
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKA-PF 45
APE+L G G ++MW++G + L+ + PF
Sbjct: 197 APEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 27.9 bits (62), Expect = 0.38
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 10 AFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES 50
F APE++ V D++ VG + L L P G
Sbjct: 242 GFQAPEIVRTGP--TVATDIYTVGRTLAALTLDLPTRNGRY 280
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 27.3 bits (61), Expect = 0.46
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 12 MAPELL-----FGARMYGVGIDMWAVGCIICELL 40
MAPE+L +D+WA G ++ E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 27.4 bits (61), Expect = 0.47
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 12 MAPELLFGA-----RMYGVGIDMWAVGCIICELL 40
M PE+L + + DM++ G I+ E+
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 26.8 bits (60), Expect = 0.67
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 12 MAPELLFGAR--MYGVGIDMWAVGCIICELL-LKAPF 45
+APE L DMW+ ++ EL+ + PF
Sbjct: 175 VAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF 211
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 27.0 bits (60), Expect = 0.69
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 12 MAPELLFGA----RMYGVGIDMWAVGCIICELL 40
MAPE+L GA R + IDM+A+G ++ EL
Sbjct: 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELA 232
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 26.7 bits (59), Expect = 0.94
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 6/35 (17%)
Query: 12 MAPELLFGA------RMYGVGIDMWAVGCIICELL 40
MAPE+L GA +DM+A+G I E+
Sbjct: 195 MAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 26.5 bits (59), Expect = 1.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 10 AFMAPELLFGARMYGVGIDMWAVGCI 35
+ APEL G + G +D+W++G I
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVI 203
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 26.1 bits (58), Expect = 1.2
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 12 MAPELLFGA-RMYGVGIDMWAVGCIICELL-LKAPF 45
MAPE + Y D ++ I+ +L + PF
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 25.7 bits (57), Expect = 2.1
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 12 MAPELLFGARMYGVGIDMWAVGCIICELL-LKAPF 45
MAPE+L D+++ G I+ EL L+ P+
Sbjct: 206 MAPEVLRD-EPSNEKSDVYSFGVILWELATLQQPW 239
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 25.3 bits (54), Expect = 2.3
Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 6/27 (22%)
Query: 2 QNWKKVR---KAFM---APELLFGARM 22
Q KK++ K + AP L A M
Sbjct: 20 QALKKLQASLKLYADDSAPALAIKATM 46
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 25.4 bits (56), Expect = 2.5
Identities = 8/37 (21%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 10 AFMAPELLFGARMYGVGIDMWAVGCIICELLLKA-PF 45
+ PE + R +G +W++G ++ +++ PF
Sbjct: 213 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 249
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 25.5 bits (56), Expect = 2.6
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLP 47
APE++ G G +D+W+ G I+ LL LP
Sbjct: 183 APEVISGRLYAGPEVDIWSSGVILYALL--CGTLP 215
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 25.3 bits (56), Expect = 2.6
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLP 47
APE++ G G +D+W+ G ++ +L LP
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVLYVML--VGRLP 207
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 25.3 bits (56), Expect = 2.7
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLP 47
APE++ G G +D+W+ G I+ +L LP
Sbjct: 179 APEVISGKLYAGPEVDVWSCGVILYVML--CRRLP 211
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 25.3 bits (56), Expect = 3.0
Identities = 6/37 (16%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 10 AFMAPELLFGARMYGVGIDMWAVGCIICELLLKA-PF 45
+ PE + + + + +W++G ++ +++ PF
Sbjct: 203 VYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF 239
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 25.1 bits (55), Expect = 3.0
Identities = 7/38 (18%), Positives = 12/38 (31%)
Query: 28 DMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
D+ +G + LL+ LP L +
Sbjct: 184 DIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQ 221
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 25.2 bits (56), Expect = 3.1
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLP 47
APE++ G G +D+W+ G I+ LL LP
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALL--CGTLP 210
>2nr3_A Hypothetical protein; APC84902, conserved domain, pseudomonas
syringae PV. tomato STR. DC3000, structural genomics,
PSI-2; 2.21A {Pseudomonas syringae PV} PDB: 3bz6_A
Length = 183
Score = 24.8 bits (54), Expect = 3.7
Identities = 8/39 (20%), Positives = 13/39 (33%), Gaps = 11/39 (28%)
Query: 35 IICELLLKAPFLPGE-----------SDLDQLTRIFQTL 62
+ LLL+ P E D +Q+ + L
Sbjct: 113 LTGLLLLRGPQTVSELLTRSNRMHDFEDSEQVVHQLERL 151
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 24.9 bits (55), Expect = 4.0
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 12 MAPELLFGARMYGVGIDMWAVGCIICELL-LKAPF 45
MAPE++ + + G D+W+ G ++ ELL + PF
Sbjct: 181 MAPEVIRASM-FSKGSDVWSYGVLLWELLTGEVPF 214
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase,
structural genomics, NPPSFA; 1.80A {Thermus
thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A
2d54_A
Length = 500
Score = 24.5 bits (54), Expect = 5.9
Identities = 11/45 (24%), Positives = 15/45 (33%), Gaps = 7/45 (15%)
Query: 35 IICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLF 79
I LL P +P + + + LG E A GL
Sbjct: 447 IASILL--TPAMPDKMA-----ELRRALGLKEEVRLEEAERWGLA 484
>3rk6_A Polyadenylate-binding protein-interacting protein; heat fold, PABP,
EIF4A, EIF3, translation regulator; 2.00A {Homo sapiens}
Length = 234
Score = 24.4 bits (52), Expect = 6.6
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 32 VGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIRA 84
+ + ELL P + +L ++ + G+ ED W G + +I+
Sbjct: 157 LQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEIIQR 209
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 24.2 bits (53), Expect = 6.8
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 12 MAPELLFGARMYGVGIDMWAVGCIICELL-LKAPF 45
MAPE+ G+ Y D+++ G I+ E++ + PF
Sbjct: 170 MAPEVFEGSN-YSEKCDVFSWGIILWEVITRRKPF 203
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 23.7 bits (52), Expect = 8.3
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLP 47
APELL + +D+W+ G ++ +L A LP
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAML--AGELP 207
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 23.8 bits (52), Expect = 9.7
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 13 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLP 47
APELL + +D+W+ G ++ +L A LP
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAML--AGELP 207
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.325 0.142 0.460
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,328,330
Number of extensions: 65504
Number of successful extensions: 288
Number of sequences better than 10.0: 1
Number of HSP's gapped: 259
Number of HSP's successfully gapped: 160
Length of query: 85
Length of database: 6,701,793
Length adjustment: 53
Effective length of query: 32
Effective length of database: 5,221,980
Effective search space: 167103360
Effective search space used: 167103360
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (23.5 bits)