BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13998
(319 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328719579|ref|XP_001944980.2| PREDICTED: hypothetical protein LOC100167755 [Acyrthosiphon pisum]
Length = 1280
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/354 (55%), Positives = 225/354 (63%), Gaps = 82/354 (23%)
Query: 6 EAKNINSCFLLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGP 65
+ KN+ S T++ +G+ VG+TPR QYLQKR+L FKIG RGSEPG
Sbjct: 969 DQKNMQSSPTSHTIIEAGMQGVGSTPRVQYLQKRQLLFKIGGRGSEPG------------ 1016
Query: 66 DNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
FTWPRG+AVGPDN IVVADSSNHR+QVF
Sbjct: 1017 ------------------------------YFTWPRGVAVGPDNLIVVADSSNHRIQVFD 1046
Query: 126 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR--------- 176
+ G + FGS GN G+ + +AV+ + I++D NHR+Q+ D +GR
Sbjct: 1047 NSGKILKDFGSYGNSEGEFDCLAGVAVNRIGQYIIADRYNHRIQVLDPSGRFLRSFGSQG 1106
Query: 177 -------------------------------VFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
VFQSDGTFVGKFGS GNK GQLEHPHYIA
Sbjct: 1107 SSDGRFNYPWGITTDALGFIYVCDKENHRIQVFQSDGTFVGKFGSNGNKIGQLEHPHYIA 1166
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG 265
VSNTNRVIVSD NNHR+QIFDVNGRVI+SFG+EGSE GQ KFP+GVAVDDQGYI V DSG
Sbjct: 1167 VSNTNRVIVSDCNNHRIQIFDVNGRVISSFGTEGSENGQFKFPKGVAVDDQGYILVADSG 1226
Query: 266 NNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NNRIQIF PD FLRAFGCWGSGDGEFKGLEG+AVMSNGNILVCDRENHR+QVF
Sbjct: 1227 NNRIQIFHPDSTFLRAFGCWGSGDGEFKGLEGIAVMSNGNILVCDRENHRVQVF 1280
>gi|157134133|ref|XP_001663162.1| tripartite motif protein trim2,3 [Aedes aegypti]
gi|108881414|gb|EAT45639.1| AAEL003104-PA [Aedes aegypti]
Length = 1293
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 195/342 (57%), Positives = 219/342 (64%), Gaps = 82/342 (23%)
Query: 18 TLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNH 77
T +V G G +PR+QYLQKRR F+IG RGSEPG
Sbjct: 994 TAVVGIPGAAGMSPRTQYLQKRRQLFQIGGRGSEPG------------------------ 1029
Query: 78 RVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
+FTWPRGIAVGPDNSIVVADSSNHRVQVF S+G FV +FG
Sbjct: 1030 ------------------SFTWPRGIAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGQY 1071
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR--------------------- 176
GN G+ + +AV+ + I++D NHR+Q+ D GR
Sbjct: 1072 GNGDGEFDCLAGVAVNRIGQFIIADRYNHRIQVLDPAGRFLRSFGSQGTADGKFNYPWGI 1131
Query: 177 -------------------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
VFQSDGTF+GKFGS G + GQLEHPHYIAVSNTNRVIVSDS
Sbjct: 1132 TTDALGFIYVCDKENHRIQVFQSDGTFIGKFGSGGKEEGQLEHPHYIAVSNTNRVIVSDS 1191
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+QIFDVNGRV+T+FGSEGS+EGQ KFPRGVAVDDQGYI V DSGNNRIQIF PDG
Sbjct: 1192 NNHRIQIFDVNGRVLTTFGSEGSDEGQFKFPRGVAVDDQGYICVADSGNNRIQIFHPDGS 1251
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FLRAFG WGSGD EFKGLEGVA+MSNGNILVCDRENHR+QVF
Sbjct: 1252 FLRAFGSWGSGDAEFKGLEGVAIMSNGNILVCDRENHRVQVF 1293
>gi|158286215|ref|XP_308626.4| AGAP007135-PA [Anopheles gambiae str. PEST]
gi|157020362|gb|EAA04156.5| AGAP007135-PA [Anopheles gambiae str. PEST]
Length = 1351
Score = 363 bits (931), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 190/330 (57%), Positives = 213/330 (64%), Gaps = 82/330 (24%)
Query: 30 TPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
+PR+QYLQKRR F+IG RGSEPG
Sbjct: 1064 SPRTQYLQKRRQLFQIGGRGSEPG------------------------------------ 1087
Query: 90 TNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
+FTWPRGIAVGPDNSIVVADSSNHRVQVF S+G FV +FG GN G+ +
Sbjct: 1088 ------SFTWPRGIAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGQYGNGDGEFDCLAG 1141
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGR--------------------------------- 176
+AV+ + I++D NHR+Q+ D GR
Sbjct: 1142 VAVNRIGQFIIADRYNHRIQVLDPAGRFLRSFGSQGTTDGKFNYPWGITTDALGFIYVCD 1201
Query: 177 -------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
VFQSDG+F+GKFG+ G + GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG
Sbjct: 1202 KENHRIQVFQSDGSFIGKFGTCGKEKGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 1261
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
RV+T+FG EGSEEGQ KFPRGVAVDDQGYI V DSGNNRIQIF PDG FLRAFG WGSGD
Sbjct: 1262 RVLTTFGGEGSEEGQFKFPRGVAVDDQGYICVADSGNNRIQIFHPDGSFLRAFGSWGSGD 1321
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
EFKGLEGVA+MSNGNILVCDRENHR+QVF
Sbjct: 1322 AEFKGLEGVAIMSNGNILVCDRENHRVQVF 1351
>gi|357622762|gb|EHJ74161.1| hypothetical protein KGM_17545 [Danaus plexippus]
Length = 1198
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 187/331 (56%), Positives = 216/331 (65%), Gaps = 82/331 (24%)
Query: 29 TTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL 88
++PRSQYLQKRRLQF +GSRGSEPGCFT
Sbjct: 910 SSPRSQYLQKRRLQFSVGSRGSEPGCFT-------------------------------- 937
Query: 89 KTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
WPRGIAVGP+N +VVADSSNHRVQVF S+G F+ +FG G+ G+ +
Sbjct: 938 ----------WPRGIAVGPENIMVVADSSNHRVQVFDSNGIFIKEFGQYGSGEGEFDCLA 987
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGR-------------------------------- 176
+AV+ + I++D NHR+Q+FD GR
Sbjct: 988 GVAVNRIGQYIIADRYNHRIQVFDPAGRFLRSFGSQGTGDGKFNYPWGITTDALGFIYVC 1047
Query: 177 --------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
VFQSDGTFVGKFGS G+K GQLEHPHYIAVS+TNRV+VSDSNNHR+Q+FDVN
Sbjct: 1048 DKENHRVQVFQSDGTFVGKFGSFGSKLGQLEHPHYIAVSSTNRVLVSDSNNHRIQVFDVN 1107
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
GRV++SFG EGSE+GQ KFPRGVAVDDQGYI V DSGNNRIQIF PDG FLRAFG WG G
Sbjct: 1108 GRVLSSFGEEGSEDGQFKFPRGVAVDDQGYIVVADSGNNRIQIFHPDGTFLRAFGSWGCG 1167
Query: 289 DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
DGEFKGLEG+AVMS GNI+VCDRENHR+QVF
Sbjct: 1168 DGEFKGLEGIAVMSGGNIIVCDRENHRVQVF 1198
>gi|189241070|ref|XP_001808548.1| PREDICTED: similar to AGAP007135-PA [Tribolium castaneum]
Length = 1245
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 188/331 (56%), Positives = 216/331 (65%), Gaps = 82/331 (24%)
Query: 29 TTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL 88
T+PRSQYLQK + F+IGSRGSE GCFT
Sbjct: 957 TSPRSQYLQKCQQLFEIGSRGSEAGCFT-------------------------------- 984
Query: 89 KTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
WPRG+AVGPDNSIVVADSSNHRVQVF S+G F+ +FG GN G+ +
Sbjct: 985 ----------WPRGVAVGPDNSIVVADSSNHRVQVFDSNGRFLKEFGQYGNGEGEFDCLA 1034
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGR-------------------------------- 176
+AV+ + I++D NHR+Q+FD +GR
Sbjct: 1035 GVAVNRIGQFIIADRYNHRIQVFDPSGRFLRAFGSQGTADGRFNYPWGITTDALGFIYVC 1094
Query: 177 --------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
VFQSDGTFVGKFGSMG+K GQLEHPHYIAVSNTNRV+VSDSNNHR+QIFDVN
Sbjct: 1095 DKENHRVQVFQSDGTFVGKFGSMGSKEGQLEHPHYIAVSNTNRVVVSDSNNHRIQIFDVN 1154
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G+V++SFGSEGS++GQ KFPRGVAVDDQGYI V DSGNNRIQIF PDG FLR+FGCWG G
Sbjct: 1155 GKVLSSFGSEGSDDGQFKFPRGVAVDDQGYICVADSGNNRIQIFHPDGTFLRSFGCWGIG 1214
Query: 289 DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GEFKGLEGVA+ NG+ILVCDRENHRIQVF
Sbjct: 1215 KGEFKGLEGVAMTPNGHILVCDRENHRIQVF 1245
>gi|241998856|ref|XP_002434071.1| nhl repeat-containing protein, putative [Ixodes scapularis]
gi|215495830|gb|EEC05471.1| nhl repeat-containing protein, putative [Ixodes scapularis]
Length = 533
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 189/329 (57%), Positives = 216/329 (65%), Gaps = 82/329 (24%)
Query: 31 PRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT 90
PRS YLQKRR+Q KIG+RG+EPGCFT
Sbjct: 247 PRSMYLQKRRMQLKIGTRGTEPGCFT---------------------------------- 272
Query: 91 NCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
WPRG+AVGPDNSIVVADSSNHRVQVF S G F +FG+ G+ G+ + +
Sbjct: 273 --------WPRGVAVGPDNSIVVADSSNHRVQVFDSSGRFQHEFGTYGSSEGEFDCLAGV 324
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGR---------------------------------- 176
AV+ + IVSD NHR+QIFD +GR
Sbjct: 325 AVNRIGQFIVSDRYNHRIQIFDPSGRFLRSFGCEGRVDARFNYPWGITTDSLGFIYVCDK 384
Query: 177 ------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VFQSDGTFVGKFGS+G++ G LEHPHY+AVSNTNRVIVSDSNNHR+QIFDVNGR
Sbjct: 385 ENHRVQVFQSDGTFVGKFGSLGSRPGHLEHPHYVAVSNTNRVIVSDSNNHRIQIFDVNGR 444
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+++FGSEGS++GQ KFPRGVAVDDQGYI VGDSGNNRIQIF PDG FLRAFG WGSGDG
Sbjct: 445 SLSTFGSEGSDDGQFKFPRGVAVDDQGYIMVGDSGNNRIQIFHPDGSFLRAFGQWGSGDG 504
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
EFKGLEG+AVM NG+I+VCDRENHRIQVF
Sbjct: 505 EFKGLEGIAVMPNGSIVVCDRENHRIQVF 533
>gi|328779273|ref|XP_391967.4| PREDICTED: RING finger protein nhl-1-like [Apis mellifera]
Length = 1281
Score = 357 bits (916), Expect = 4e-96, Method: Composition-based stats.
Identities = 184/328 (56%), Positives = 209/328 (63%), Gaps = 82/328 (25%)
Query: 32 RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN 91
RS YL KRR FK G RGSEPGCFT
Sbjct: 996 RSHYLLKRRQLFKFGMRGSEPGCFT----------------------------------- 1020
Query: 92 CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
WPRG+AVGPDNSIVVADSSNHRVQVF +G F+ +FGS G+ G+ + +A
Sbjct: 1021 -------WPRGLAVGPDNSIVVADSSNHRVQVFDCNGNFMKEFGSYGSGEGEFDCLAGVA 1073
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGR----------------------------------- 176
V+ + I++D NHR+Q+ D +GR
Sbjct: 1074 VNRIGQYIIADRYNHRIQVLDPSGRFLRAFGSQGTADGRFNYPWGITTDALGFIYVCDKE 1133
Query: 177 -----VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
VFQSDGTFVGKFGS G+ GQLEHPHYIAVSNTNRVIVSD NNHR+QIFDVNGRV
Sbjct: 1134 NHRVQVFQSDGTFVGKFGSCGSGRGQLEHPHYIAVSNTNRVIVSDGNNHRIQIFDVNGRV 1193
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+TSFGSEGS+EGQ KFPRGVAVDDQGYI V DSGNNRIQIF+P+G FL++FG WGSGDGE
Sbjct: 1194 LTSFGSEGSDEGQFKFPRGVAVDDQGYIVVADSGNNRIQIFSPEGAFLKSFGGWGSGDGE 1253
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
FKGLEGVAV S GNI+VCDRENHR+QVF
Sbjct: 1254 FKGLEGVAVTSTGNIVVCDRENHRVQVF 1281
Score = 94.0 bits (232), Expect = 7e-17, Method: Composition-based stats.
Identities = 47/105 (44%), Positives = 64/105 (60%)
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
S ++N R + + R + FG GSE G +PRG+AV I V DS N+R+Q+F
Sbjct: 989 SSTSNGRRSHYLLKRRQLFKFGMRGSEPGCFTWPRGLAVGPDNSIVVADSSNHRVQVFDC 1048
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G F++ FG +GSG+GEF L GVAV G ++ DR NHRIQV
Sbjct: 1049 NGNFMKEFGSYGSGEGEFDCLAGVAVNRIGQYIIADRYNHRIQVL 1093
>gi|383857485|ref|XP_003704235.1| PREDICTED: RING finger protein nhl-1-like isoform 2 [Megachile
rotundata]
Length = 1297
Score = 350 bits (898), Expect = 4e-94, Method: Composition-based stats.
Identities = 180/328 (54%), Positives = 208/328 (63%), Gaps = 82/328 (25%)
Query: 32 RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN 91
RS YL KRR FK G RGSE GCFT
Sbjct: 1012 RSHYLLKRRQLFKFGMRGSEAGCFT----------------------------------- 1036
Query: 92 CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
WPRG+AVGPDN+IVVADSSNHRVQVF +G F+ +FG+ G+ G+ + +A
Sbjct: 1037 -------WPRGLAVGPDNTIVVADSSNHRVQVFDCNGNFMKEFGTYGSGEGEFDCLAGVA 1089
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGR----------------------------------- 176
V+ + I++D NHR+Q+ D +GR
Sbjct: 1090 VNRIGQYIIADRYNHRIQVLDPSGRFLRAFGSQGTADGRFNYPWGITTDALGFIYVCDKE 1149
Query: 177 -----VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
VFQSDGTFVGKFGS G+ GQLEHPHYIAVSNTNRVIVSD NNHR+QIFDVNGRV
Sbjct: 1150 NHRVQVFQSDGTFVGKFGSCGSGRGQLEHPHYIAVSNTNRVIVSDGNNHRIQIFDVNGRV 1209
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+TSFGSEGS+EGQ KFPRGVAVDDQGYI V DSGNNRIQIF+P+G +L++FG WGSGDGE
Sbjct: 1210 LTSFGSEGSDEGQFKFPRGVAVDDQGYIVVADSGNNRIQIFSPEGAYLKSFGGWGSGDGE 1269
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
FKGLEGVAV S GNI+VCDRENHR+QVF
Sbjct: 1270 FKGLEGVAVTSTGNIVVCDRENHRVQVF 1297
Score = 94.4 bits (233), Expect = 7e-17, Method: Composition-based stats.
Identities = 47/105 (44%), Positives = 64/105 (60%)
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
S ++N R + + R + FG GSE G +PRG+AV I V DS N+R+Q+F
Sbjct: 1005 SSTSNGRRSHYLLKRRQLFKFGMRGSEAGCFTWPRGLAVGPDNTIVVADSSNHRVQVFDC 1064
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G F++ FG +GSG+GEF L GVAV G ++ DR NHRIQV
Sbjct: 1065 NGNFMKEFGTYGSGEGEFDCLAGVAVNRIGQYIIADRYNHRIQVL 1109
>gi|383857483|ref|XP_003704234.1| PREDICTED: RING finger protein nhl-1-like isoform 1 [Megachile
rotundata]
Length = 1233
Score = 350 bits (897), Expect = 6e-94, Method: Composition-based stats.
Identities = 180/328 (54%), Positives = 208/328 (63%), Gaps = 82/328 (25%)
Query: 32 RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN 91
RS YL KRR FK G RGSE GCFT
Sbjct: 948 RSHYLLKRRQLFKFGMRGSEAGCFT----------------------------------- 972
Query: 92 CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
WPRG+AVGPDN+IVVADSSNHRVQVF +G F+ +FG+ G+ G+ + +A
Sbjct: 973 -------WPRGLAVGPDNTIVVADSSNHRVQVFDCNGNFMKEFGTYGSGEGEFDCLAGVA 1025
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGR----------------------------------- 176
V+ + I++D NHR+Q+ D +GR
Sbjct: 1026 VNRIGQYIIADRYNHRIQVLDPSGRFLRAFGSQGTADGRFNYPWGITTDALGFIYVCDKE 1085
Query: 177 -----VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
VFQSDGTFVGKFGS G+ GQLEHPHYIAVSNTNRVIVSD NNHR+QIFDVNGRV
Sbjct: 1086 NHRVQVFQSDGTFVGKFGSCGSGRGQLEHPHYIAVSNTNRVIVSDGNNHRIQIFDVNGRV 1145
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+TSFGSEGS+EGQ KFPRGVAVDDQGYI V DSGNNRIQIF+P+G +L++FG WGSGDGE
Sbjct: 1146 LTSFGSEGSDEGQFKFPRGVAVDDQGYIVVADSGNNRIQIFSPEGAYLKSFGGWGSGDGE 1205
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
FKGLEGVAV S GNI+VCDRENHR+QVF
Sbjct: 1206 FKGLEGVAVTSTGNIVVCDRENHRVQVF 1233
Score = 94.4 bits (233), Expect = 7e-17, Method: Composition-based stats.
Identities = 47/105 (44%), Positives = 64/105 (60%)
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
S ++N R + + R + FG GSE G +PRG+AV I V DS N+R+Q+F
Sbjct: 941 SSTSNGRRSHYLLKRRQLFKFGMRGSEAGCFTWPRGLAVGPDNTIVVADSSNHRVQVFDC 1000
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G F++ FG +GSG+GEF L GVAV G ++ DR NHRIQV
Sbjct: 1001 NGNFMKEFGTYGSGEGEFDCLAGVAVNRIGQYIIADRYNHRIQVL 1045
>gi|332025715|gb|EGI65873.1| RING finger protein nhl-1 [Acromyrmex echinatior]
Length = 1199
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 185/328 (56%), Positives = 209/328 (63%), Gaps = 82/328 (25%)
Query: 32 RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN 91
RS YL KRR FK G RGSE GCFT
Sbjct: 914 RSHYLLKRRQLFKFGMRGSEAGCFT----------------------------------- 938
Query: 92 CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
WPRG+AVGPDNSIVVADSSNHRVQVF +G F+ +FG+ G+ G+ + +A
Sbjct: 939 -------WPRGLAVGPDNSIVVADSSNHRVQVFDGNGNFMKEFGTYGSNEGEFDCLAGVA 991
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGR----------------------------------- 176
V+ + I++D NHR+Q+ D +GR
Sbjct: 992 VNRIGQYIIADRYNHRIQVLDPSGRFLRAFGSQGTADGRFNYPWGITTDALGFIYVCDKE 1051
Query: 177 -----VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
VFQSDGTFVGKFGS G+ GQLEHPHYIAVSNTNRVIVSD NNHRVQIFDVNGRV
Sbjct: 1052 NHRVQVFQSDGTFVGKFGSCGSGRGQLEHPHYIAVSNTNRVIVSDGNNHRVQIFDVNGRV 1111
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+TSFGSEGS+EGQ KFPRGVAVDDQGYI V DSGNNRIQIF+PDG FL++FGCWGSGDGE
Sbjct: 1112 LTSFGSEGSDEGQFKFPRGVAVDDQGYIIVADSGNNRIQIFSPDGAFLKSFGCWGSGDGE 1171
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
FKGLEGVAV S GNI+VCDRENHR+QVF
Sbjct: 1172 FKGLEGVAVTSTGNIVVCDRENHRVQVF 1199
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 63/105 (60%)
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
S ++N R + + R + FG GSE G +PRG+AV I V DS N+R+Q+F
Sbjct: 907 SSTSNGRRSHYLLKRRQLFKFGMRGSEAGCFTWPRGLAVGPDNSIVVADSSNHRVQVFDG 966
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G F++ FG +GS +GEF L GVAV G ++ DR NHRIQV
Sbjct: 967 NGNFMKEFGTYGSNEGEFDCLAGVAVNRIGQYIIADRYNHRIQVL 1011
>gi|321468757|gb|EFX79740.1| hypothetical protein DAPPUDRAFT_304337 [Daphnia pulex]
Length = 1319
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 180/335 (53%), Positives = 215/335 (64%), Gaps = 82/335 (24%)
Query: 25 GQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP 84
G + ++ R QY+QKR++ K+G+RGSE G
Sbjct: 1027 GLITSSSRHQYMQKRKVLMKMGTRGSEAG------------------------------- 1055
Query: 85 HFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQL 144
AFTWPRG+AV PDNSIVVADSSNHRVQVF S G F+ +FG GN G+
Sbjct: 1056 -----------AFTWPRGVAVAPDNSIVVADSSNHRVQVFDSTGKFLKEFGYYGNGEGEF 1104
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR---------------------------- 176
+ +A++ + I++D NHR+Q+FD +GR
Sbjct: 1105 DCLAGVAINRIGQYIIADRYNHRIQVFDPSGRFLRVFGSQGTTDGKFSYPWGVTTDALGF 1164
Query: 177 ------------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 224
VFQSDGTFVGKFG+MGN+ GQLEHPHYIAVS+TNRVIVSDSNNHR+Q+
Sbjct: 1165 IYVCDKENHRVQVFQSDGTFVGKFGTMGNRPGQLEHPHYIAVSSTNRVIVSDSNNHRIQV 1224
Query: 225 FDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGC 284
FDVNG+VI SFG EG++EGQ KFPRGVAVDDQGYI V DSGNNRIQ+FT DG F++AFGC
Sbjct: 1225 FDVNGKVIASFGGEGADEGQFKFPRGVAVDDQGYIVVADSGNNRIQVFTADGVFVKAFGC 1284
Query: 285 WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
WGSGDGEFKGLEG+AVMSNGNI+ DRENHRIQVF
Sbjct: 1285 WGSGDGEFKGLEGIAVMSNGNIVCADRENHRIQVF 1319
>gi|270013854|gb|EFA10302.1| hypothetical protein TcasGA2_TC012517 [Tribolium castaneum]
Length = 2020
Score = 347 bits (889), Expect = 5e-93, Method: Composition-based stats.
Identities = 176/320 (55%), Positives = 205/320 (64%), Gaps = 82/320 (25%)
Query: 29 TTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL 88
T+PRSQYLQK + F+IGSRGSE GCFT
Sbjct: 947 TSPRSQYLQKCQQLFEIGSRGSEAGCFT-------------------------------- 974
Query: 89 KTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
WPRG+AVGPDNSIVVADSSNHRVQVF S+G F+ +FG GN G+ +
Sbjct: 975 ----------WPRGVAVGPDNSIVVADSSNHRVQVFDSNGRFLKEFGQYGNGEGEFDCLA 1024
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGR-------------------------------- 176
+AV+ + I++D NHR+Q+FD +GR
Sbjct: 1025 GVAVNRIGQFIIADRYNHRIQVFDPSGRFLRAFGSQGTADGRFNYPWGITTDALGFIYVC 1084
Query: 177 --------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
VFQSDGTFVGKFGSMG+K GQLEHPHYIAVSNTNRV+VSDSNNHR+QIFDVN
Sbjct: 1085 DKENHRVQVFQSDGTFVGKFGSMGSKEGQLEHPHYIAVSNTNRVVVSDSNNHRIQIFDVN 1144
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G+V++SFGSEGS++GQ KFPRGVAVDDQGYI V DSGNNRIQIF PDG FLR+FGCWG G
Sbjct: 1145 GKVLSSFGSEGSDDGQFKFPRGVAVDDQGYICVADSGNNRIQIFHPDGTFLRSFGCWGIG 1204
Query: 289 DGEFKGLEGVAVMSNGNILV 308
GEFKGLEGVA+ NG+IL+
Sbjct: 1205 KGEFKGLEGVAMTPNGHILI 1224
Score = 158 bits (399), Expect = 4e-36, Method: Composition-based stats.
Identities = 74/187 (39%), Positives = 116/187 (62%), Gaps = 7/187 (3%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
+ GS G++AG P +AV N ++V+DS+NHRVQ+FD NGR F+ +FG G
Sbjct: 962 EIGSRGSEAGCFTWPRGVAVGPDNSIVVADSSNHRVQVFDSNGR-------FLKEFGQYG 1014
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
N G+ + +AV+ + I++D NHR+Q+FD +GR + +FGS+G+ +G+ +P G+
Sbjct: 1015 NGEGEFDCLAGVAVNRIGQFIIADRYNHRIQVFDPSGRFLRAFGSQGTADGRFNYPWGIT 1074
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRE 312
D G+I V D N+R+Q+F DG F+ FG GS +G+ + +AV + ++V D
Sbjct: 1075 TDALGFIYVCDKENHRVQVFQSDGTFVGKFGSMGSKEGQLEHPHYIAVSNTNRVVVSDSN 1134
Query: 313 NHRIQVF 319
NHRIQ+F
Sbjct: 1135 NHRIQIF 1141
>gi|350405986|ref|XP_003487620.1| PREDICTED: hypothetical protein LOC100746052 [Bombus impatiens]
Length = 1795
Score = 346 bits (888), Expect = 6e-93, Method: Composition-based stats.
Identities = 181/328 (55%), Positives = 207/328 (63%), Gaps = 82/328 (25%)
Query: 32 RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN 91
RS YL KRR FK G RGSE GCFT
Sbjct: 1510 RSHYLLKRRQLFKFGMRGSEAGCFT----------------------------------- 1534
Query: 92 CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
WPRG+AVGPDNSIVVADSSNHRVQVF +G F+ +FG+ G+ G+ + +A
Sbjct: 1535 -------WPRGLAVGPDNSIVVADSSNHRVQVFDGNGNFMKEFGTYGSGEGEFDCLAGVA 1587
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGR----------------------------------- 176
V+ + I++D NHR+Q+ D +GR
Sbjct: 1588 VNRIGQYIIADRYNHRIQVLDPSGRFLRAFGSQGTADGRFNYPWGITTDVLGFIYVCDKE 1647
Query: 177 -----VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
VFQSDGTFVGKFGS G+ GQLEHPHYIAVSNTNRVIVSD NNHR+QIFDVNG V
Sbjct: 1648 NHRVQVFQSDGTFVGKFGSCGSGRGQLEHPHYIAVSNTNRVIVSDGNNHRIQIFDVNGHV 1707
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+TSFGSEGS+EGQ KFPRGVAVDDQGYI V DSGNNRIQIF+P+G FL++FG WGSGDGE
Sbjct: 1708 LTSFGSEGSDEGQFKFPRGVAVDDQGYIVVADSGNNRIQIFSPEGAFLKSFGGWGSGDGE 1767
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
FKGLEGVAV S GNI+VCDRENHR+QVF
Sbjct: 1768 FKGLEGVAVTSTGNIVVCDRENHRVQVF 1795
Score = 93.6 bits (231), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/105 (44%), Positives = 64/105 (60%)
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
S ++N R + + R + FG GSE G +PRG+AV I V DS N+R+Q+F
Sbjct: 1503 SSTSNGRRSHYLLKRRQLFKFGMRGSEAGCFTWPRGLAVGPDNSIVVADSSNHRVQVFDG 1562
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G F++ FG +GSG+GEF L GVAV G ++ DR NHRIQV
Sbjct: 1563 NGNFMKEFGTYGSGEGEFDCLAGVAVNRIGQYIIADRYNHRIQVL 1607
>gi|195426818|ref|XP_002061491.1| GK20936 [Drosophila willistoni]
gi|194157576|gb|EDW72477.1| GK20936 [Drosophila willistoni]
Length = 1354
Score = 346 bits (888), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 181/336 (53%), Positives = 210/336 (62%), Gaps = 82/336 (24%)
Query: 24 IGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF 83
G GT P+ YL+KR+ F++G RGSEPG
Sbjct: 1061 TGVAGTIPKQVYLRKRQQLFQLGGRGSEPG------------------------------ 1090
Query: 84 PHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
+FTWPRG+AVGPDNSIVVADSSNHRVQVF S+G FV +FG GN G+
Sbjct: 1091 ------------SFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGE 1138
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR--------------------------- 176
+ +AV+ + I++D NHR+Q+ D GR
Sbjct: 1139 FDCLAGVAVNRIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGTADGKFNYPWGVTTDALG 1198
Query: 177 -------------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
VFQSDG+FVGKFGS G GQLEHPHYIAVSNTNRVIVSDSNNHR+Q
Sbjct: 1199 FIYVCDKENHRVQVFQSDGSFVGKFGSCGRSEGQLEHPHYIAVSNTNRVIVSDSNNHRIQ 1258
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
IFDVNG+V+++ G EGS++GQ KFPRGVAVDDQGYI V DSGNNRIQIF PDG FL+ FG
Sbjct: 1259 IFDVNGKVLSTVGGEGSDDGQFKFPRGVAVDDQGYIFVADSGNNRIQIFNPDGSFLKTFG 1318
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
WGSGD EFKGLEGVA+MSNGNILVCDRENHR+QVF
Sbjct: 1319 SWGSGDSEFKGLEGVAIMSNGNILVCDRENHRVQVF 1354
>gi|195029981|ref|XP_001987850.1| GH22138 [Drosophila grimshawi]
gi|193903850|gb|EDW02717.1| GH22138 [Drosophila grimshawi]
Length = 1353
Score = 346 bits (887), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 181/336 (53%), Positives = 210/336 (62%), Gaps = 82/336 (24%)
Query: 24 IGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF 83
G GT P+ YL+KR+ F++G RGSEPG
Sbjct: 1060 TGVAGTIPKQVYLRKRQQLFQLGGRGSEPG------------------------------ 1089
Query: 84 PHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
+FTWPRG+AVGPDNSIVVADSSNHRVQVF S+G FV +FG GN G+
Sbjct: 1090 ------------SFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGE 1137
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR--------------------------- 176
+ +AV+ + I++D NHR+Q+ D GR
Sbjct: 1138 FDCLAGVAVNRIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGIADGKFNYPWGVTTDALG 1197
Query: 177 -------------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
VFQSDG+FVGKFGS G GQLEHPHYIAVSNTNRVIVSDSNNHR+Q
Sbjct: 1198 FIYVCDKENHRVQVFQSDGSFVGKFGSCGRGEGQLEHPHYIAVSNTNRVIVSDSNNHRIQ 1257
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
IFDVNG+V+++ G EGS++GQ KFPRGVAVDDQGYI V DSGNNRIQIF PDG FL+ FG
Sbjct: 1258 IFDVNGKVLSTVGGEGSDDGQFKFPRGVAVDDQGYIFVADSGNNRIQIFNPDGSFLKTFG 1317
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
WGSGD EFKGLEGVA+MSNGNILVCDRENHR+QVF
Sbjct: 1318 SWGSGDSEFKGLEGVAIMSNGNILVCDRENHRVQVF 1353
>gi|380011633|ref|XP_003689904.1| PREDICTED: uncharacterized protein LOC100869288, partial [Apis
florea]
Length = 1660
Score = 346 bits (887), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 184/328 (56%), Positives = 209/328 (63%), Gaps = 82/328 (25%)
Query: 32 RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN 91
RS YL KRR FK G RGSEPGCFT
Sbjct: 1375 RSHYLLKRRQLFKFGMRGSEPGCFT----------------------------------- 1399
Query: 92 CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
WPRG+AVGPDNSIVVADSSNHRVQVF +G F+ +FGS G+ G+ + +A
Sbjct: 1400 -------WPRGLAVGPDNSIVVADSSNHRVQVFDCNGNFMKEFGSYGSGEGEFDCLAGVA 1452
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGR----------------------------------- 176
V+ + I++D NHR+Q+ D +GR
Sbjct: 1453 VNRIGQYIIADRYNHRIQVLDPSGRFLRAFGSQGTADGRFNYPWGITTDALGFIYVCDKE 1512
Query: 177 -----VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
VFQSDGTFVGKFGS G+ GQLEHPHYIAVSNTNRVIVSD NNHR+QIFDVNGRV
Sbjct: 1513 NHRVQVFQSDGTFVGKFGSCGSGRGQLEHPHYIAVSNTNRVIVSDGNNHRIQIFDVNGRV 1572
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+TSFGSEGS+EGQ KFPRGVAVDDQGYI V DSGNNRIQIF+P+G FL++FG WGSGDGE
Sbjct: 1573 LTSFGSEGSDEGQFKFPRGVAVDDQGYIVVADSGNNRIQIFSPEGAFLKSFGGWGSGDGE 1632
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
FKGLEGVAV S GNI+VCDRENHR+QVF
Sbjct: 1633 FKGLEGVAVTSAGNIVVCDRENHRVQVF 1660
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 64/105 (60%)
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
S ++N R + + R + FG GSE G +PRG+AV I V DS N+R+Q+F
Sbjct: 1368 SSTSNGRRSHYLLKRRQLFKFGMRGSEPGCFTWPRGLAVGPDNSIVVADSSNHRVQVFDC 1427
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G F++ FG +GSG+GEF L GVAV G ++ DR NHRIQV
Sbjct: 1428 NGNFMKEFGSYGSGEGEFDCLAGVAVNRIGQYIIADRYNHRIQVL 1472
>gi|242011481|ref|XP_002426477.1| nhl repeat-containing protein, putative [Pediculus humanus corporis]
gi|212510603|gb|EEB13739.1| nhl repeat-containing protein, putative [Pediculus humanus corporis]
Length = 1324
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/321 (57%), Positives = 209/321 (65%), Gaps = 82/321 (25%)
Query: 28 GTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD 87
G+T R+QYLQKRR FKIGSRGSEPGCFT
Sbjct: 1039 GSTLRNQYLQKRRQLFKIGSRGSEPGCFT------------------------------- 1067
Query: 88 LKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHP 147
WPRGIAVG DNSIVVADSSNHRV+VF S G F+ +FG+ GN G+ +
Sbjct: 1068 -----------WPRGIAVGIDNSIVVADSSNHRVEVFDSRGNFLKEFGTYGNGMGEFDCL 1116
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNGR------------------------------- 176
+AV+ + I++D NHRVQ+ D +GR
Sbjct: 1117 TGVAVNRIGQFIIADRYNHRVQVLDPSGRFLRAFGSQGTADGRFNYPWGITTDALGFIYV 1176
Query: 177 ---------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 227
VFQSDGTFVGKFG+ GNK GQLEHPHYIAVSNTNRVIVSDSNNHR+QIFDV
Sbjct: 1177 CDKENHRVQVFQSDGTFVGKFGTQGNKPGQLEHPHYIAVSNTNRVIVSDSNNHRIQIFDV 1236
Query: 228 NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGS 287
NGRV++SFG+EGS+EGQ KFPRGVAVDDQGYI VGDSGNNRIQIF PDG FL++FGCWGS
Sbjct: 1237 NGRVLSSFGNEGSDEGQFKFPRGVAVDDQGYIFVGDSGNNRIQIFHPDGSFLKSFGCWGS 1296
Query: 288 GDGEFKGLEGVAVMSNGNILV 308
GDGEFKGLEGVAVMSNGNIL+
Sbjct: 1297 GDGEFKGLEGVAVMSNGNILI 1317
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 113/187 (60%), Gaps = 7/187 (3%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
K GS G++ G P IAV N ++V+DS+NHRV++FD S G F+ +FG+ G
Sbjct: 1055 KIGSRGSEPGCFTWPRGIAVGIDNSIVVADSSNHRVEVFD-------SRGNFLKEFGTYG 1107
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
N G+ + +AV+ + I++D NHRVQ+ D +GR + +FGS+G+ +G+ +P G+
Sbjct: 1108 NGMGEFDCLTGVAVNRIGQFIIADRYNHRVQVLDPSGRFLRAFGSQGTADGRFNYPWGIT 1167
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRE 312
D G+I V D N+R+Q+F DG F+ FG G+ G+ + +AV + ++V D
Sbjct: 1168 TDALGFIYVCDKENHRVQVFQSDGTFVGKFGTQGNKPGQLEHPHYIAVSNTNRVIVSDSN 1227
Query: 313 NHRIQVF 319
NHRIQ+F
Sbjct: 1228 NHRIQIF 1234
>gi|195384463|ref|XP_002050937.1| GJ19924 [Drosophila virilis]
gi|194145734|gb|EDW62130.1| GJ19924 [Drosophila virilis]
Length = 1346
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 181/336 (53%), Positives = 210/336 (62%), Gaps = 82/336 (24%)
Query: 24 IGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF 83
G GT P+ YL+KR+ F++G RGSEPG
Sbjct: 1053 TGVAGTIPKQVYLRKRQQLFQLGGRGSEPG------------------------------ 1082
Query: 84 PHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
+FTWPRG+AVGPDNSIVVADSSNHRVQVF S+G FV +FG GN G+
Sbjct: 1083 ------------SFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGE 1130
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR--------------------------- 176
+ +AV+ + I++D NHR+Q+ D GR
Sbjct: 1131 FDCLAGVAVNRIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGIADGKFNYPWGVTTDALG 1190
Query: 177 -------------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
VFQSDG+FVGKFGS G GQLEHPHYIAVSNTNRVIVSDSNNHR+Q
Sbjct: 1191 FIYVCDKENHRVQVFQSDGSFVGKFGSCGRGEGQLEHPHYIAVSNTNRVIVSDSNNHRIQ 1250
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
IFDVNG+V+++ G EGS++GQ KFPRGVAVDDQGYI V DSGNNRIQIF PDG FL+ FG
Sbjct: 1251 IFDVNGKVLSTVGGEGSDDGQFKFPRGVAVDDQGYIFVADSGNNRIQIFNPDGSFLKTFG 1310
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
WGSGD EFKGLEGVA+MSNGNILVCDRENHR+QVF
Sbjct: 1311 SWGSGDSEFKGLEGVAIMSNGNILVCDRENHRVQVF 1346
>gi|198457486|ref|XP_001360687.2| GA13495 [Drosophila pseudoobscura pseudoobscura]
gi|198135998|gb|EAL25262.2| GA13495 [Drosophila pseudoobscura pseudoobscura]
Length = 1349
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 181/336 (53%), Positives = 210/336 (62%), Gaps = 82/336 (24%)
Query: 24 IGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF 83
G GT P+ YL+KR+ F++G RGSEPG
Sbjct: 1056 TGVAGTIPKQVYLRKRQQLFQLGGRGSEPG------------------------------ 1085
Query: 84 PHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
+FTWPRG+AVGPDNSIVVADSSNHRVQVF S+G FV +FG GN G+
Sbjct: 1086 ------------SFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGE 1133
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR--------------------------- 176
+ +AV+ + I++D NHR+Q+ D GR
Sbjct: 1134 FDCLAGVAVNRIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGTADGKFNYPWGVTTDALG 1193
Query: 177 -------------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
VFQSDG+FVGKFGS G GQLEHPHYIAVSNTNRVIVSDSNNHR+Q
Sbjct: 1194 FIYVCDKENHRVQVFQSDGSFVGKFGSCGRGEGQLEHPHYIAVSNTNRVIVSDSNNHRIQ 1253
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
IFDVNG+V+++ G EGS++GQ KFPRGVAVDDQGYI V DSGNNRIQIF PDG FL+ FG
Sbjct: 1254 IFDVNGKVLSTVGGEGSDDGQFKFPRGVAVDDQGYIFVADSGNNRIQIFNPDGSFLKTFG 1313
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
WGSGD EFKGLEGVA+MSNGNILVCDRENHR+QVF
Sbjct: 1314 SWGSGDSEFKGLEGVAIMSNGNILVCDRENHRVQVF 1349
>gi|195150695|ref|XP_002016286.1| GL11502 [Drosophila persimilis]
gi|194110133|gb|EDW32176.1| GL11502 [Drosophila persimilis]
Length = 1349
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 181/336 (53%), Positives = 210/336 (62%), Gaps = 82/336 (24%)
Query: 24 IGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF 83
G GT P+ YL+KR+ F++G RGSEPG
Sbjct: 1056 TGVAGTIPKQVYLRKRQQLFQLGGRGSEPG------------------------------ 1085
Query: 84 PHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
+FTWPRG+AVGPDNSIVVADSSNHRVQVF S+G FV +FG GN G+
Sbjct: 1086 ------------SFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGE 1133
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR--------------------------- 176
+ +AV+ + I++D NHR+Q+ D GR
Sbjct: 1134 FDCLAGVAVNRIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGTADGKFNYPWGVTTDALG 1193
Query: 177 -------------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
VFQSDG+FVGKFGS G GQLEHPHYIAVSNTNRVIVSDSNNHR+Q
Sbjct: 1194 FIYVCDKENHRVQVFQSDGSFVGKFGSCGRGEGQLEHPHYIAVSNTNRVIVSDSNNHRIQ 1253
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
IFDVNG+V+++ G EGS++GQ KFPRGVAVDDQGYI V DSGNNRIQIF PDG FL+ FG
Sbjct: 1254 IFDVNGKVLSTVGGEGSDDGQFKFPRGVAVDDQGYIFVADSGNNRIQIFNPDGSFLKTFG 1313
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
WGSGD EFKGLEGVA+MSNGNILVCDRENHR+QVF
Sbjct: 1314 SWGSGDSEFKGLEGVAIMSNGNILVCDRENHRVQVF 1349
>gi|195120698|ref|XP_002004858.1| GI19367 [Drosophila mojavensis]
gi|193909926|gb|EDW08793.1| GI19367 [Drosophila mojavensis]
Length = 1340
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 181/335 (54%), Positives = 210/335 (62%), Gaps = 82/335 (24%)
Query: 25 GQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP 84
G GT P+ YL+KR+ F++G RGSEPG
Sbjct: 1048 GVAGTIPKQVYLRKRQQLFQLGGRGSEPG------------------------------- 1076
Query: 85 HFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQL 144
+FTWPRG+AVGPDNSIVVADSSNHRVQVF S+G FV +FG GN G+
Sbjct: 1077 -----------SFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEF 1125
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR---------------------------- 176
+ +AV+ + I++D NHR+Q+ D GR
Sbjct: 1126 DCLAGVAVNRIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGIADGKFNYPWGVTTDALGF 1185
Query: 177 ------------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 224
VFQSDG+FVGKFGS G GQLEHPHYIAVSNTNRVIVSDSNNHR+QI
Sbjct: 1186 IYVCDKENHRVQVFQSDGSFVGKFGSCGRGEGQLEHPHYIAVSNTNRVIVSDSNNHRIQI 1245
Query: 225 FDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGC 284
FDVNG+V+++ G EGS++GQ KFPRGVAVDDQGYI V DSGNNRIQIF PDG FL+ FG
Sbjct: 1246 FDVNGKVLSTVGGEGSDDGQFKFPRGVAVDDQGYIFVADSGNNRIQIFNPDGSFLKTFGS 1305
Query: 285 WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
WGSGD EFKGLEGVA+MSNGNILVCDRENHR+QVF
Sbjct: 1306 WGSGDSEFKGLEGVAIMSNGNILVCDRENHRVQVF 1340
>gi|322790121|gb|EFZ15148.1| hypothetical protein SINV_01508 [Solenopsis invicta]
Length = 472
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 183/328 (55%), Positives = 209/328 (63%), Gaps = 82/328 (25%)
Query: 32 RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN 91
RS YL KRR FK G RGSE GCFT
Sbjct: 187 RSHYLLKRRQLFKFGMRGSEAGCFT----------------------------------- 211
Query: 92 CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
WPRG+AVGPDNSIVVADSSNHRVQVF +G F+ +FG+ G+ G+ + +A
Sbjct: 212 -------WPRGLAVGPDNSIVVADSSNHRVQVFDGNGNFIKEFGTYGSGEGEFDCLAGVA 264
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGR----------------------------------- 176
V+ + I++D NHR+Q+ D +GR
Sbjct: 265 VNRIGQYIIADRYNHRIQVLDPSGRFLRAFGSQGTADGRFNYPWGITTDALGFIYVCDKE 324
Query: 177 -----VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
VFQSDGTFVGKFGS G+ GQLEHPHYIAVSNTNRVIVSD NNHRVQIFDVNGRV
Sbjct: 325 NHRVQVFQSDGTFVGKFGSCGSGRGQLEHPHYIAVSNTNRVIVSDGNNHRVQIFDVNGRV 384
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+TSFGSEGS++GQ KFPRGVAVDDQGYI V DSGNNRIQIF+PDG F+++FGCWGSGDGE
Sbjct: 385 LTSFGSEGSDDGQFKFPRGVAVDDQGYIVVADSGNNRIQIFSPDGAFVKSFGCWGSGDGE 444
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
FKGLEGVAV S GNI+VCDRENHR+QVF
Sbjct: 445 FKGLEGVAVTSTGNIVVCDRENHRVQVF 472
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 64/105 (60%)
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
S ++N R + + R + FG GSE G +PRG+AV I V DS N+R+Q+F
Sbjct: 180 SSTSNGRRSHYLLKRRQLFKFGMRGSEAGCFTWPRGLAVGPDNSIVVADSSNHRVQVFDG 239
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G F++ FG +GSG+GEF L GVAV G ++ DR NHRIQV
Sbjct: 240 NGNFIKEFGTYGSGEGEFDCLAGVAVNRIGQYIIADRYNHRIQVL 284
>gi|340723937|ref|XP_003400343.1| PREDICTED: hypothetical protein LOC100643462 [Bombus terrestris]
Length = 1787
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 207/328 (63%), Gaps = 82/328 (25%)
Query: 32 RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN 91
RS YL KRR FK G RGSE GCFT
Sbjct: 1502 RSHYLLKRRQLFKFGMRGSEAGCFT----------------------------------- 1526
Query: 92 CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
WPRG+AVGPDNSIVVADSSNHRVQVF +G F+ +FG+ G+ G+ + +A
Sbjct: 1527 -------WPRGLAVGPDNSIVVADSSNHRVQVFDGNGNFMKEFGTYGSGEGEFDCLAGVA 1579
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGR----------------------------------- 176
V+ + I++D NHR+Q+ D +GR
Sbjct: 1580 VNRIGQYIIADRYNHRIQVLDPSGRFLRAFGSQGTADGRFNYPWGITTDVLGFIYVCDKE 1639
Query: 177 -----VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
VFQSDGTFVGKFGS G+ GQLEHPHYIAVSNTNRVIVSD NNHR+QIFDVNG V
Sbjct: 1640 NHRVQVFQSDGTFVGKFGSCGSGRGQLEHPHYIAVSNTNRVIVSDGNNHRIQIFDVNGHV 1699
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+TSFGSEGS+EGQ KFPRGVAVDDQGYI V DSGNNRIQIF+P+G FL++FG WGSGDGE
Sbjct: 1700 LTSFGSEGSDEGQFKFPRGVAVDDQGYIVVADSGNNRIQIFSPEGAFLKSFGGWGSGDGE 1759
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
FKGLEGVAV S GNI+VCDRENHR+QVF
Sbjct: 1760 FKGLEGVAVTSTGNIVVCDRENHRVQVF 1787
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 64/105 (60%)
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
S ++N R + + R + FG GSE G +PRG+AV I V DS N+R+Q+F
Sbjct: 1495 SSTSNGRRSHYLLKRRQLFKFGMRGSEAGCFTWPRGLAVGPDNSIVVADSSNHRVQVFDG 1554
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G F++ FG +GSG+GEF L GVAV G ++ DR NHRIQV
Sbjct: 1555 NGNFMKEFGTYGSGEGEFDCLAGVAVNRIGQYIIADRYNHRIQVL 1599
>gi|307166850|gb|EFN60780.1| RING finger protein nhl-1 [Camponotus floridanus]
Length = 510
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 182/328 (55%), Positives = 208/328 (63%), Gaps = 82/328 (25%)
Query: 32 RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN 91
RS YL KRR FK G RGSE GCFT
Sbjct: 225 RSHYLLKRRQLFKFGMRGSEAGCFT----------------------------------- 249
Query: 92 CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
WPRG+AVGPDNSIVVADSSNHR+QVF +G F+ +FG+ G+ G+ + +A
Sbjct: 250 -------WPRGLAVGPDNSIVVADSSNHRIQVFDGNGNFMKEFGTYGSGEGEFDCLAGVA 302
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGR----------------------------------- 176
V+ + I++D NHR+Q+ D +GR
Sbjct: 303 VNRIGQYIIADRYNHRIQVLDPSGRFLRAFGSQGTADGRFNYPWGITTDALGFIYVCDKE 362
Query: 177 -----VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
VFQSDGTFVGKFGS G GQLEHPHYIAVSNTNRVIVSD NNHRVQIFDVNGRV
Sbjct: 363 NHRVQVFQSDGTFVGKFGSCGGGRGQLEHPHYIAVSNTNRVIVSDGNNHRVQIFDVNGRV 422
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+TSFGSEGS++GQ KFPRGVAVDDQGYI V DSGNNRIQIF+PDG FL+++GCWGSGDGE
Sbjct: 423 LTSFGSEGSDDGQFKFPRGVAVDDQGYIVVADSGNNRIQIFSPDGTFLKSYGCWGSGDGE 482
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
FKGLEGVAV S GNI+VCDRENHR+QVF
Sbjct: 483 FKGLEGVAVTSTGNIVVCDRENHRVQVF 510
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 64/105 (60%)
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
S ++N R + + R + FG GSE G +PRG+AV I V DS N+RIQ+F
Sbjct: 218 SSTSNGRRSHYLLKRRQLFKFGMRGSEAGCFTWPRGLAVGPDNSIVVADSSNHRIQVFDG 277
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G F++ FG +GSG+GEF L GVAV G ++ DR NHRIQV
Sbjct: 278 NGNFMKEFGTYGSGEGEFDCLAGVAVNRIGQYIIADRYNHRIQVL 322
>gi|221330419|ref|NP_001137707.1| another B-box affiliate, isoform C [Drosophila melanogaster]
gi|220902287|gb|ACL83161.1| another B-box affiliate, isoform C [Drosophila melanogaster]
Length = 1517
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 178/329 (54%), Positives = 207/329 (62%), Gaps = 82/329 (24%)
Query: 31 PRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT 90
P+ YL+KR+ F++G RGSEPG
Sbjct: 1231 PKQVYLRKRQQLFQLGGRGSEPG------------------------------------- 1253
Query: 91 NCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
+FTWPRG+AVGPDNSIVVADSSNHRVQVF S+G FV +FG GN G+ + +
Sbjct: 1254 -----SFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEFDCLAGV 1308
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGR---------------------------------- 176
AV+ + I++D NHR+Q+ D GR
Sbjct: 1309 AVNRIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGTADGKFNYPWGVTTDALGFIYVCDK 1368
Query: 177 ------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VFQSDG+FVGKFGS G GQLEHPHYIAVSNTNRVIVSDSNNHR+QIFDVNG+
Sbjct: 1369 ENHRVQVFQSDGSFVGKFGSCGRGEGQLEHPHYIAVSNTNRVIVSDSNNHRIQIFDVNGK 1428
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
V+++ G EGS++GQ KFPRGVAVDDQGYI V DSGNNRIQIF PDG FL+ FG WGSGD
Sbjct: 1429 VLSTVGGEGSDDGQFKFPRGVAVDDQGYIFVADSGNNRIQIFNPDGSFLKTFGSWGSGDS 1488
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
EFKGLEGVA+MSNGNILVCDRENHR+QVF
Sbjct: 1489 EFKGLEGVAIMSNGNILVCDRENHRVQVF 1517
>gi|195487256|ref|XP_002091832.1| GE12016 [Drosophila yakuba]
gi|194177933|gb|EDW91544.1| GE12016 [Drosophila yakuba]
Length = 1354
Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 178/329 (54%), Positives = 207/329 (62%), Gaps = 82/329 (24%)
Query: 31 PRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT 90
P+ YL+KR+ F++G RGSEPG
Sbjct: 1068 PKQVYLRKRQQLFQLGGRGSEPG------------------------------------- 1090
Query: 91 NCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
+FTWPRG+AVGPDNSIVVADSSNHRVQVF S+G FV +FG GN G+ + +
Sbjct: 1091 -----SFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEFDCLAGV 1145
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGR---------------------------------- 176
AV+ + I++D NHR+Q+ D GR
Sbjct: 1146 AVNRIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGTADGKFNYPWGVTTDALGFIYVCDK 1205
Query: 177 ------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VFQSDG+FVGKFGS G GQLEHPHYIAVSNTNRVIVSDSNNHR+QIFDVNG+
Sbjct: 1206 ENHRVQVFQSDGSFVGKFGSCGRGEGQLEHPHYIAVSNTNRVIVSDSNNHRIQIFDVNGK 1265
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
V+++ G EGS++GQ KFPRGVAVDDQGYI V DSGNNRIQIF PDG FL+ FG WGSGD
Sbjct: 1266 VLSTVGGEGSDDGQFKFPRGVAVDDQGYIFVADSGNNRIQIFNPDGSFLKTFGSWGSGDS 1325
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
EFKGLEGVA+MSNGNILVCDRENHR+QVF
Sbjct: 1326 EFKGLEGVAIMSNGNILVCDRENHRVQVF 1354
>gi|22024206|ref|NP_611390.2| another B-box affiliate, isoform A [Drosophila melanogaster]
gi|24655386|ref|NP_725843.1| another B-box affiliate, isoform B [Drosophila melanogaster]
gi|21464288|gb|AAM51947.1| GH06739p [Drosophila melanogaster]
gi|21626957|gb|AAF57612.2| another B-box affiliate, isoform A [Drosophila melanogaster]
gi|21626958|gb|AAF57611.2| another B-box affiliate, isoform B [Drosophila melanogaster]
Length = 1353
Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 178/329 (54%), Positives = 207/329 (62%), Gaps = 82/329 (24%)
Query: 31 PRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT 90
P+ YL+KR+ F++G RGSEPG
Sbjct: 1067 PKQVYLRKRQQLFQLGGRGSEPG------------------------------------- 1089
Query: 91 NCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
+FTWPRG+AVGPDNSIVVADSSNHRVQVF S+G FV +FG GN G+ + +
Sbjct: 1090 -----SFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEFDCLAGV 1144
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGR---------------------------------- 176
AV+ + I++D NHR+Q+ D GR
Sbjct: 1145 AVNRIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGTADGKFNYPWGVTTDALGFIYVCDK 1204
Query: 177 ------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VFQSDG+FVGKFGS G GQLEHPHYIAVSNTNRVIVSDSNNHR+QIFDVNG+
Sbjct: 1205 ENHRVQVFQSDGSFVGKFGSCGRGEGQLEHPHYIAVSNTNRVIVSDSNNHRIQIFDVNGK 1264
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
V+++ G EGS++GQ KFPRGVAVDDQGYI V DSGNNRIQIF PDG FL+ FG WGSGD
Sbjct: 1265 VLSTVGGEGSDDGQFKFPRGVAVDDQGYIFVADSGNNRIQIFNPDGSFLKTFGSWGSGDS 1324
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
EFKGLEGVA+MSNGNILVCDRENHR+QVF
Sbjct: 1325 EFKGLEGVAIMSNGNILVCDRENHRVQVF 1353
>gi|194881256|ref|XP_001974764.1| GG21942 [Drosophila erecta]
gi|190657951|gb|EDV55164.1| GG21942 [Drosophila erecta]
Length = 1353
Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 178/329 (54%), Positives = 207/329 (62%), Gaps = 82/329 (24%)
Query: 31 PRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT 90
P+ YL+KR+ F++G RGSEPG
Sbjct: 1067 PKQVYLRKRQQLFQLGGRGSEPG------------------------------------- 1089
Query: 91 NCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
+FTWPRG+AVGPDNSIVVADSSNHRVQVF S+G FV +FG GN G+ + +
Sbjct: 1090 -----SFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEFDCLAGV 1144
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGR---------------------------------- 176
AV+ + I++D NHR+Q+ D GR
Sbjct: 1145 AVNRIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGTADGKFNYPWGVTTDALGFIYVCDK 1204
Query: 177 ------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VFQSDG+FVGKFGS G GQLEHPHYIAVSNTNRVIVSDSNNHR+QIFDVNG+
Sbjct: 1205 ENHRVQVFQSDGSFVGKFGSCGRGEGQLEHPHYIAVSNTNRVIVSDSNNHRIQIFDVNGK 1264
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
V+++ G EGS++GQ KFPRGVAVDDQGYI V DSGNNRIQIF PDG FL+ FG WGSGD
Sbjct: 1265 VLSTVGGEGSDDGQFKFPRGVAVDDQGYIFVADSGNNRIQIFNPDGSFLKTFGSWGSGDS 1324
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
EFKGLEGVA+MSNGNILVCDRENHR+QVF
Sbjct: 1325 EFKGLEGVAIMSNGNILVCDRENHRVQVF 1353
>gi|195335766|ref|XP_002034534.1| GM21930 [Drosophila sechellia]
gi|194126504|gb|EDW48547.1| GM21930 [Drosophila sechellia]
Length = 784
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 178/329 (54%), Positives = 207/329 (62%), Gaps = 82/329 (24%)
Query: 31 PRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT 90
P+ YL+KR+ F++G RGSEPG
Sbjct: 498 PKQVYLRKRQQLFQLGGRGSEPG------------------------------------- 520
Query: 91 NCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
+FTWPRG+AVGPDNSIVVADSSNHRVQVF S+G FV +FG GN G+ + +
Sbjct: 521 -----SFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEFDCLAGV 575
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGR---------------------------------- 176
AV+ + I++D NHR+Q+ D GR
Sbjct: 576 AVNRIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGTADGKFNYPWGVTTDALGFIYVCDK 635
Query: 177 ------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VFQSDG+FVGKFGS G GQLEHPHYIAVSNTNRVIVSDSNNHR+QIFDVNG+
Sbjct: 636 ENHRVQVFQSDGSFVGKFGSCGRGEGQLEHPHYIAVSNTNRVIVSDSNNHRIQIFDVNGK 695
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
V+++ G EGS++GQ KFPRGVAVDDQGYI V DSGNNRIQIF PDG FL+ FG WGSGD
Sbjct: 696 VLSTVGGEGSDDGQFKFPRGVAVDDQGYIFVADSGNNRIQIFNPDGSFLKTFGSWGSGDS 755
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
EFKGLEGVA+MSNGNILVCDRENHR+QVF
Sbjct: 756 EFKGLEGVAIMSNGNILVCDRENHRVQVF 784
>gi|194757852|ref|XP_001961176.1| GF11130 [Drosophila ananassae]
gi|190622474|gb|EDV37998.1| GF11130 [Drosophila ananassae]
Length = 1348
Score = 336 bits (862), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 176/329 (53%), Positives = 206/329 (62%), Gaps = 82/329 (24%)
Query: 31 PRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT 90
P+ YL+KR+ F++G RGSEPG
Sbjct: 1062 PKQVYLRKRQQLFQLGGRGSEPG------------------------------------- 1084
Query: 91 NCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
+FTWPRG+AVGPDNSIVVADSSNHRVQVF S+G FV +FG GN G+ + +
Sbjct: 1085 -----SFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEFDCLAGV 1139
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGR---------------------------------- 176
AV+ + I++D NHR+Q+ D GR
Sbjct: 1140 AVNRIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGTADGKFNYPWGVTTDALGFIYVCDK 1199
Query: 177 ------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VFQSDG+FVGKFG+ G GQLEHPHYIAVSNTNRVIVSDSNNHR+QIFDVNG+
Sbjct: 1200 ENHRVQVFQSDGSFVGKFGTCGRGEGQLEHPHYIAVSNTNRVIVSDSNNHRIQIFDVNGK 1259
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
V+++ G EGS++GQ KFPRGVAVDD GYI V DSGNNRIQIF PDG FL+ FG WGSGD
Sbjct: 1260 VLSTVGGEGSDDGQFKFPRGVAVDDLGYIFVADSGNNRIQIFNPDGSFLKTFGSWGSGDS 1319
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
EFKGLEGVA+MSNGNILVCDRENHR+QVF
Sbjct: 1320 EFKGLEGVAIMSNGNILVCDRENHRVQVF 1348
>gi|345487473|ref|XP_003425698.1| PREDICTED: RING finger protein nhl-1-like [Nasonia vitripennis]
Length = 510
Score = 336 bits (861), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 183/328 (55%), Positives = 208/328 (63%), Gaps = 82/328 (25%)
Query: 32 RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN 91
R QYL KRR FK G RGSE GCFT
Sbjct: 225 RGQYLLKRRQLFKFGMRGSEAGCFT----------------------------------- 249
Query: 92 CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
WPRG+AVGPDNSIVVADSSNHRVQVF +G F+ +FG+ G+ G+ + +A
Sbjct: 250 -------WPRGLAVGPDNSIVVADSSNHRVQVFDGNGNFMREFGNYGSGEGEFDCLAGVA 302
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGR----------------------------------- 176
V+ + I++D NHR+Q+FD +GR
Sbjct: 303 VNRIGQFIIADRYNHRIQVFDPSGRFLRAFGFQGTADGRFNYPWGITTDALGFIYVCDKE 362
Query: 177 -----VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
VFQSDGTFVGKFGS G+ GQLEHPHYIAVS+TNRVIVSDSNNHRVQIFDVNGRV
Sbjct: 363 NHRVQVFQSDGTFVGKFGSCGSGRGQLEHPHYIAVSSTNRVIVSDSNNHRVQIFDVNGRV 422
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+T+FGSEGS+EGQ KFPRGVAVDDQGYI V DSGNNRIQIFTP+G FL+AFG WG DGE
Sbjct: 423 LTAFGSEGSDEGQFKFPRGVAVDDQGYIVVADSGNNRIQIFTPEGAFLKAFGNWGCADGE 482
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
FKGLEGVAV S GNI+VCDRENHR+QVF
Sbjct: 483 FKGLEGVAVTSVGNIVVCDRENHRVQVF 510
>gi|391336193|ref|XP_003742466.1| PREDICTED: RING finger protein nhl-1-like [Metaseiulus
occidentalis]
Length = 851
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 163/329 (49%), Positives = 200/329 (60%), Gaps = 82/329 (24%)
Query: 31 PRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT 90
PR+ Y+QK + IG RGSE G
Sbjct: 565 PRTAYIQKGECKLSIGKRGSETG------------------------------------- 587
Query: 91 NCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
+FTWPR +AVGPD S+VVADSSNHRVQVF S+G F+ FG G+ G+L++P +
Sbjct: 588 -----SFTWPRSVAVGPDGSLVVADSSNHRVQVFDSNGRFLHAFGKQGSADGELDNPAGV 642
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGR---------------------------------- 176
AV+ ++IVSD N+RVQIFD +GR
Sbjct: 643 AVNRIGQIIVSDRYNNRVQIFDASGRFIRAFGGDGRSDGKFQCPWGLTTDSLGFIYVCDK 702
Query: 177 ------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VFQSDG+FVGK GS+G + G LEHP YIAVS+TNRVIVSD+NNHRVQ+FDVNG+
Sbjct: 703 ENHRVQVFQSDGSFVGKMGSVGCRPGCLEHPSYIAVSSTNRVIVSDTNNHRVQVFDVNGK 762
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+FG+EGSEEG +FPRG+AVDDQGYI V DSGNNRIQ+F PDG F++AFG WG+ G
Sbjct: 763 CQFTFGAEGSEEGLFRFPRGIAVDDQGYIIVSDSGNNRIQVFQPDGSFIKAFGSWGAESG 822
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+FKGLE +AV S G+I+ CDRENHRIQVF
Sbjct: 823 KFKGLEDLAVSSKGDIVACDRENHRIQVF 851
>gi|291232828|ref|XP_002736356.1| PREDICTED: NHL (ring finger b-box coiled coil) domain containing
family member (nhl-1)-like [Saccoglossus kowalevskii]
Length = 871
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/295 (48%), Positives = 191/295 (64%), Gaps = 15/295 (5%)
Query: 31 PRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT 90
P Y QK R + + G +G+ CF+WPRG+A PDN IVVADSSNHRVQV F F
Sbjct: 586 PFVNYNQKGRSRLRFGKKGTTDACFSWPRGVATLPDNQIVVADSSNHRVQV-FDEFGQFL 644
Query: 91 NCVFL------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQL 144
C F G+ I++AD NHR+QV + G FV KFG G++ G+L
Sbjct: 645 CCFGTHGTGDGQFDCLAGVCTNSRVQIIIADRYNHRIQVIEPSGRFVCKFGQEGSEDGKL 704
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYI 204
+P +A + + V D +NHR+Q+F V+G TF+ KFG +G+ AGQLE PHY+
Sbjct: 705 NYPWGVACDRADNIYVCDRDNHRIQVFTVSG-------TFIRKFGRLGHSAGQLESPHYV 757
Query: 205 AVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDS 264
A+ + ++V VSDS NH VQ+F+++G+ FG EGS GQ K+PRG+ D GY+ VGDS
Sbjct: 758 AIHD-DKVFVSDSGNHCVQVFNLDGQFQWKFGQEGSNYGQFKYPRGIVTDPHGYVLVGDS 816
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GNNRIQ+F P G ++ FG +G+G+G+ KG+EGVA+MSNGNI+V DRENHRI VF
Sbjct: 817 GNNRIQVFRPSGTYMACFGTFGAGNGQLKGVEGVAMMSNGNIVVSDRENHRIHVF 871
>gi|405965347|gb|EKC30728.1| RING finger protein nhl-1 [Crassostrea gigas]
Length = 1031
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/296 (47%), Positives = 190/296 (64%), Gaps = 21/296 (7%)
Query: 34 QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGP-DNSIVVADSSNHRVQVCFPHFDLKTNC 92
+Y K R F++G RG+E FTWPRGIA DN ++VADS N+RVQV FD +
Sbjct: 747 RYTDKGRAIFQVGLRGTEHSEFTWPRGIATTSRDNQVLVADSHNNRVQV----FDNRGQF 802
Query: 93 VF---------LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
V F GIAV IVV D NHR+Q+F + F FG G + GQ
Sbjct: 803 VRSIGNYGTGDAEFDSVTGIAVNSFGQIVVTDRMNHRIQIFDHNWNFQLTFGEEGVEPGQ 862
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
L +P +A N + V D NHRVQ VFQS+G FV +FGSMG++ G L++PHY
Sbjct: 863 LLYPWGVASDNMGFIYVCDKENHRVQ-------VFQSNGRFVREFGSMGHRLGCLDNPHY 915
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
+A+S NRV V+DSNNHR+Q+F + G + FGS GS +G++K P+G+A+D QG++ V D
Sbjct: 916 LAISPDNRVYVTDSNNHRIQVFSMYGDFLFCFGSHGSLQGEMKLPKGIAIDGQGFVVVAD 975
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
SGNNRIQ+F DG+F FGC+GS G+F+GLEG+ ++ NG+++V DRENHRIQ+F
Sbjct: 976 SGNNRIQVFHGDGRFYCMFGCYGSESGQFRGLEGIGILGNGDVVVSDRENHRIQMF 1031
>gi|260788947|ref|XP_002589510.1| hypothetical protein BRAFLDRAFT_88379 [Branchiostoma floridae]
gi|229274688|gb|EEN45521.1| hypothetical protein BRAFLDRAFT_88379 [Branchiostoma floridae]
Length = 1338
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/251 (51%), Positives = 159/251 (63%), Gaps = 40/251 (15%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FTWPRG+AV P+N I+VADSSNHRVQVF +G V FGS G G+ + + V++
Sbjct: 458 FTWPRGVAVSPENYIIVADSSNHRVQVFTPNGQLVRVFGSYGTGEGEFDCLAGVTVNSQG 517
Query: 157 RVIVSDSNNHRVQIFDVNGR---------------------------------------- 176
++ +D NHRVQIFD NGR
Sbjct: 518 WIVTADRYNHRVQIFDSNGRFIRQFGQEGSRDGQLSYPWGVATDRMGFIYVCDKDNHRVQ 577
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ DG FV KFG +GN GQ E+PHYIAV+ N+VIVSDS+NHR+Q+FD GR + FG
Sbjct: 578 VFRLDGAFVRKFGRLGNGNGQFENPHYIAVARDNKVIVSDSSNHRIQVFDKYGRFVLKFG 637
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
SEGS GQ K+PRGVAVD +G+I VGDSGNNR+Q+F DG FL AFG WGSGDGE KGLE
Sbjct: 638 SEGSGNGQFKYPRGVAVDQEGHIIVGDSGNNRLQVFRQDGSFLCAFGTWGSGDGEVKGLE 697
Query: 297 GVAVMSNGNIL 307
GVA+MS G+ +
Sbjct: 698 GVALMSRGHKM 708
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 120/196 (61%), Gaps = 7/196 (3%)
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGT 183
+++ G KFGS G+ G P +AVS N +IV+DS+NHRVQ+F NG++
Sbjct: 438 YRTKGLIQTKFGSKGSDLGHFTWPRGVAVSPENYIIVADSSNHRVQVFTPNGQL------ 491
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
V FGS G G+ + + V++ ++ +D NHRVQIFD NGR I FG EGS +G
Sbjct: 492 -VRVFGSYGTGEGEFDCLAGVTVNSQGWIVTADRYNHRVQIFDSNGRFIRQFGQEGSRDG 550
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
QL +P GVA D G+I V D N+R+Q+F DG F+R FG G+G+G+F+ +AV +
Sbjct: 551 QLSYPWGVATDRMGFIYVCDKDNHRVQVFRLDGAFVRKFGRLGNGNGQFENPHYIAVARD 610
Query: 304 GNILVCDRENHRIQVF 319
++V D NHRIQVF
Sbjct: 611 NKVIVSDSSNHRIQVF 626
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 103/178 (57%), Gaps = 5/178 (2%)
Query: 142 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP 201
G LE Y N IVSD + RVQ +++ G KFGS G+ G P
Sbjct: 407 GSLEFTSYDVPLND---IVSDFS--RVQRRSPTSAFYRTKGLIQTKFGSKGSDLGHFTWP 461
Query: 202 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISV 261
+AVS N +IV+DS+NHRVQ+F NG+++ FGS G+ EG+ GV V+ QG+I
Sbjct: 462 RGVAVSPENYIIVADSSNHRVQVFTPNGQLVRVFGSYGTGEGEFDCLAGVTVNSQGWIVT 521
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D N+R+QIF +G+F+R FG GS DG+ GVA G I VCD++NHR+QVF
Sbjct: 522 ADRYNHRVQIFDSNGRFIRQFGQEGSRDGQLSYPWGVATDRMGFIYVCDKDNHRVQVF 579
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 117/263 (44%), Gaps = 104/263 (39%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSN------------------ 76
Y K +Q K GS+GS+ G FTWPRG+AV P+N I+VADSSN
Sbjct: 438 YRTKGLIQTKFGSKGSDLGHFTWPRGVAVSPENYIIVADSSNHRVQVFTPNGQLVRVFGS 497
Query: 77 -----------------------------HRVQVCFPHFDLKTNCVFL-----------A 96
HRVQ+ FD +N F+
Sbjct: 498 YGTGEGEFDCLAGVTVNSQGWIVTADRYNHRVQI----FD--SNGRFIRQFGQEGSRDGQ 551
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
++P G+A I V D NHRVQVF+ DG FV KFG +GN GQ E+PHYIAV+ N
Sbjct: 552 LSYPWGVATDRMGFIYVCDKDNHRVQVFRLDGAFVRKFGRLGNGNGQFENPHYIAVARDN 611
Query: 157 RVIVSDSNNHRVQIFDVNGR---------------------------------------- 176
+VIVSDS+NHR+Q+FD GR
Sbjct: 612 KVIVSDSSNHRIQVFDKYGRFVLKFGSEGSGNGQFKYPRGVAVDQEGHIIVGDSGNNRLQ 671
Query: 177 VFQSDGTFVGKFGSMGNKAGQLE 199
VF+ DG+F+ FG+ G+ G+++
Sbjct: 672 VFRQDGSFLCAFGTWGSGDGEVK 694
>gi|339258624|ref|XP_003369498.1| RING finger protein nhl-1 [Trichinella spiralis]
gi|316966251|gb|EFV50848.1| RING finger protein nhl-1 [Trichinella spiralis]
Length = 902
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/264 (45%), Positives = 168/264 (63%), Gaps = 41/264 (15%)
Query: 97 FTWPRGIAVGPD-NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F WPRG+A+ + ++V DSSNHR+QVF G F+ +G GN +G+ + P +AV++
Sbjct: 639 FNWPRGVALSSNGREVIVCDSSNHRLQVFDLHGHFLRSYGKYGNGSGEFDSPAGVAVNHC 698
Query: 156 NRVIVSDSNNHRVQIFDVNGR--------------------------------------- 176
N++IVSD NHR+QI D NGR
Sbjct: 699 NQLIVSDRYNHRLQILDPNGRSVRILGCHGQNNGRFNNPWGLTIGSHGTIYVCDRDNHRV 758
Query: 177 -VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSF 235
V QSDG+F KFG +G++ GQ +HPH+I ++ +++IVSD++NHR+Q+FD NG+ +F
Sbjct: 759 QVLQSDGSFYAKFGELGSREGQFQHPHFIVANHHDQLIVSDTSNHRIQVFDQNGQFQFAF 818
Query: 236 GSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL 295
GSEG EGQ K+P+GVA+DDQ +I V DSGN+R+QIF PDG+F FG WG+GDGE + L
Sbjct: 819 GSEGHHEGQFKYPKGVAIDDQEFIFVADSGNSRVQIFYPDGRFFAQFGSWGNGDGELRSL 878
Query: 296 EGVAVMSNGNILVCDRENHRIQVF 319
E + V S+G I+V DRENHR+Q+F
Sbjct: 879 EDLKVTSDGFIIVTDRENHRVQIF 902
>gi|393912207|gb|EFO20548.2| RING finger protein nhl-1 [Loa loa]
Length = 1144
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 131/293 (44%), Positives = 179/293 (61%), Gaps = 18/293 (6%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y+ K + + G +GS+ G WPRG+AV N V DSSNHR+ C + + +F
Sbjct: 862 YVAKAKPKLVFGKKGSKEGELNWPRGLAVLGGNEFAVCDSSNHRI--CIFNTGGRLLRMF 919
Query: 95 -------LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHP 147
GI ++V+D NHR+ +F +G V KFG G +G+ +P
Sbjct: 920 GKYGSGDAQLDSAAGICCSRYKHLIVSDRYNHRIMIFDQNGHCVKKFGGHGPSSGRFNNP 979
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
+AV + + V D +NHRVQ+FD S G F GKFG+MG GQ HP +IAV+
Sbjct: 980 WGVAVDDMGMIYVVDKDNHRVQMFD-------SKGQFAGKFGTMGPGIGQFHHPQFIAVN 1032
Query: 208 N-TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
T + V+DS+NHRV IFD NG I FGSEG + GQ+KFPRG+AVDDQG+I V DSGN
Sbjct: 1033 KRTQNIYVTDSSNHRVCIFDHNGNPIFQFGSEGYQNGQMKFPRGIAVDDQGFIIVADSGN 1092
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NR+QIF P+G+++ +FG WG+ G+ KG+E VA++ + I+V DRENHRIQ+F
Sbjct: 1093 NRVQIFYPNGRYMHSFGTWGNAPGQLKGVEAVALI-DTTIVVSDRENHRIQLF 1144
>gi|170573447|ref|XP_001892474.1| Hypothetical RING finger protein F54G8.4 in chromosome III, putative
[Brugia malayi]
gi|158601961|gb|EDP38697.1| Hypothetical RING finger protein F54G8.4 in chromosome III, putative
[Brugia malayi]
Length = 1024
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 132/293 (45%), Positives = 178/293 (60%), Gaps = 18/293 (6%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
YL K + + G +GS+ G WPRG+A+ N V DSSNHRV C + + +F
Sbjct: 742 YLAKGKPKLVFGKKGSKEGELNWPRGLAILGGNEFAVCDSSNHRV--CIFNTGGRLLKMF 799
Query: 95 -------LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHP 147
GI ++V+D NHR+ +F DG V KFG G G+ +P
Sbjct: 800 GKYGTGDAQLDSAAGICYSRYKHLIVSDRYNHRIMIFDQDGHCVRKFGGHGPSNGRFNNP 859
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
+AV + + V D +NHRVQ+FD S G F GKFG+MG Q HP +IAV+
Sbjct: 860 WGVAVDDMGMIYVVDKDNHRVQMFD-------SKGQFAGKFGTMGPGISQFHHPQFIAVN 912
Query: 208 N-TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
T+ + V+DS+NHRV IFD NG I FGSEG + GQ+KFPRG+AVDDQG+I V DSGN
Sbjct: 913 KRTHNIYVTDSSNHRVCIFDHNGNPIFQFGSEGFQNGQMKFPRGIAVDDQGFIIVADSGN 972
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NR+QIF P+G+++ +FG WG+ G+ KG+E VA++ + I+V DRENHRIQ+F
Sbjct: 973 NRVQIFYPNGRYMHSFGTWGNAPGQLKGVEAVALI-DTTIVVTDRENHRIQLF 1024
>gi|324517576|gb|ADY46859.1| RING finger protein nhl-1 [Ascaris suum]
Length = 309
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 127/293 (43%), Positives = 170/293 (58%), Gaps = 18/293 (6%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y K + + G +GS+ G WPRG+ V DSSNHRV C + + VF
Sbjct: 27 YQSKSKPRLVFGKKGSKEGDLNWPRGVTAICGTEFAVCDSSNHRV--CIFNTQGRLLRVF 84
Query: 95 LAF-------TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHP 147
+ GI ++V+D NHR+ +F G F+ FG G +G+ +P
Sbjct: 85 GKYGTGEGQLDSAAGICCNRFRQLIVSDRYNHRIVIFDQLGQFIKAFGGHGPSSGRFNNP 144
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV- 206
+ V T + D +NHR+Q+FD NG+ FV KFGSMG GQL +P +IA
Sbjct: 145 WGVCVDETGIIYAVDKDNHRIQVFDSNGQ-------FVSKFGSMGPGPGQLHNPQFIAYH 197
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
T + V+DS+NHRV +FD NG + FG EG GQLKFPRG+AVDDQG+I V DSGN
Sbjct: 198 KQTQHLYVTDSSNHRVCVFDHNGNPVFQFGQEGFHNGQLKFPRGIAVDDQGFIIVADSGN 257
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NR+QIF PDG+F+ +FG WG+G G+ KGLE + + + I+V DRENHRIQ+F
Sbjct: 258 NRVQIFYPDGRFMHSFGTWGNGPGQLKGLEDI-TLCDKTIVVSDRENHRIQLF 309
>gi|443708903|gb|ELU03822.1| hypothetical protein CAPTEDRAFT_223323 [Capitella teleta]
Length = 886
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 124/300 (41%), Positives = 177/300 (59%), Gaps = 22/300 (7%)
Query: 31 PRSQYLQKRRLQFKIG-SRGSEPGCFTWPRGIAVGP-DNSIVVADSSNHRVQVCFPHFDL 88
P Y K+ KIG RGS G F PRG+A+ P D +IV+ADSSNHR QV FD
Sbjct: 598 PEIDYQAKKNPVMKIGGERGSAEGQFKLPRGVAISPQDGTIVIADSSNHRAQV----FDQ 653
Query: 89 KTNCVFL---------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGN 139
V F G+A+ +++AD NHR+Q+F S+ F KFGS G+
Sbjct: 654 HGQYVRTFGSYGDSDGEFDCLAGVAISQSGDVIIADRYNHRIQIFDSNFNFKLKFGSEGS 713
Query: 140 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE 199
G+ ++P + V + V V D NHRVQ VF +DGTF+ +FGS GN+ G+LE
Sbjct: 714 SDGKFKYPWGVTVDHEGLVYVCDKENHRVQ-------VFGADGTFLRRFGSTGNQPGKLE 766
Query: 200 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYI 259
+P+YI V + + VSD++N+R+Q+F G + SFG G ++G+ K P+G+ VD G++
Sbjct: 767 NPYYITVGHDRNIYVSDTHNNRIQVFTSQGGFVNSFGGPGDQDGKFKHPKGITVDHNGFM 826
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V DSGN+RIQ+ DG F FG G G+G+ + EG+A+ +G ILV D++N+RI +F
Sbjct: 827 VVADSGNHRIQVLRSDGTFFAKFGTKGRGEGQLRDPEGIAITPDGKILVADKDNYRILMF 886
>gi|402587633|gb|EJW81568.1| RING finger protein nhl-1 [Wuchereria bancrofti]
Length = 794
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/261 (45%), Positives = 161/261 (61%), Gaps = 18/261 (6%)
Query: 67 NSIVVADSSNHRVQVCFPHFDLKTNCVF-------LAFTWPRGIAVGPDNSIVVADSSNH 119
N V DSSNHR+ C + + +F GI ++V+D NH
Sbjct: 544 NEFAVCDSSNHRI--CIFNTGGRLLKMFGKYGTGDAQLDSAAGICYSRYKHLIVSDRYNH 601
Query: 120 RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ 179
R+ +F DG V KFG G G+ +P +AV + + V D +NHRVQ+FD
Sbjct: 602 RIMIFDQDGHCVRKFGGHGPSNGRFNNPWGVAVDDMGMIYVVDKDNHRVQMFD------- 654
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVITSFGSE 238
S G F GKFG+MG GQ HP +IAV+ T+ + V+DS+NHRV IFD NG I FGSE
Sbjct: 655 SKGQFAGKFGTMGPGIGQFHHPQFIAVNKRTHNIYVTDSSNHRVCIFDHNGNSIFQFGSE 714
Query: 239 GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGV 298
G + GQ+KFPRG+AVDDQG+I V DSGNNR+QIF P+G+++ +FG WG+ G+ KG+E V
Sbjct: 715 GFQNGQMKFPRGIAVDDQGFIIVADSGNNRVQIFYPNGRYMHSFGTWGNAPGQLKGVEAV 774
Query: 299 AVMSNGNILVCDRENHRIQVF 319
A++ + I+V DRENHRIQ+F
Sbjct: 775 ALI-DTTIVVSDRENHRIQLF 794
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 132/244 (54%), Gaps = 24/244 (9%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---- 95
RL G G+ GI ++V+D NHR+ + FD +CV
Sbjct: 564 RLLKMFGKYGTGDAQLDSAAGICYSRYKHLIVSDRYNHRIMI----FDQDGHCVRKFGGH 619
Query: 96 -----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
F P G+AV I V D NHRVQ+F S G F GKFG+MG GQ HP +I
Sbjct: 620 GPSNGRFNNPWGVAVDDMGMIYVVDKDNHRVQMFDSKGQFAGKFGTMGPGIGQFHHPQFI 679
Query: 151 AVSN-TNRVIVSDSNNHRVQIFDVNGR-VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 208
AV+ T+ + V+DS+NHRV IFD NG +FQ FGS G + GQ++ P IAV +
Sbjct: 680 AVNKRTHNIYVTDSSNHRVCIFDHNGNSIFQ--------FGSEGFQNGQMKFPRGIAVDD 731
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
+IV+DS N+RVQIF NGR + SFG+ G+ GQLK VA+ D I V D N+R
Sbjct: 732 QGFIIVADSGNNRVQIFYPNGRYMHSFGTWGNAPGQLKGVEAVALIDT-TIVVSDRENHR 790
Query: 269 IQIF 272
IQ+F
Sbjct: 791 IQLF 794
>gi|308501841|ref|XP_003113105.1| CRE-NHL-1 protein [Caenorhabditis remanei]
gi|308265406|gb|EFP09359.1| CRE-NHL-1 protein [Caenorhabditis remanei]
Length = 986
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 127/283 (44%), Positives = 168/283 (59%), Gaps = 20/283 (7%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV-----FLAFTWP 100
G +G++ G WPRGI + DSSNHRV V FD V + + +
Sbjct: 715 GRKGAKDGELNWPRGICAMAGGLVATCDSSNHRVCV----FDKDGKFVRQFGGYGSGSGQ 770
Query: 101 RGIAVGPDNS---IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
A G +S IVV+D NHR+ VF +G + FG G + +P +AV +
Sbjct: 771 LDSAAGLASSKLRIVVSDRYNHRISVFGLEGDHLFSFGGHGQGNAKFNNPWGVAVDDLGS 830
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSD 216
+ V+D +NHRVQ+FD NG+ F+ KFGS G+ GQL P +IAVS T+ V VSD
Sbjct: 831 IYVADKDNHRVQVFDKNGQ-------FIAKFGSFGHLPGQLNSPLFIAVSRVTHHVYVSD 883
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
S+NHR+ +FD +G + SFG EG GQ KFPRG+A+D Q I + DSGNNRIQIF G
Sbjct: 884 SSNHRISVFDPHGVHLFSFGEEGFHGGQFKFPRGIAIDSQENIIIADSGNNRIQIFDAQG 943
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
QF+ +FG WG G G+ KG+E V V +G+I+V DRENHRIQ+F
Sbjct: 944 QFVSSFGTWGGGAGQLKGVEDVCVTVDGSIVVTDRENHRIQIF 986
>gi|268574858|ref|XP_002642408.1| C. briggsae CBR-NHL-1 protein [Caenorhabditis briggsae]
Length = 979
Score = 216 bits (551), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 126/283 (44%), Positives = 168/283 (59%), Gaps = 20/283 (7%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV-----FLAFTWP 100
G +G++ G WPRGI + DSSNHRV V FD + V + + +
Sbjct: 708 GRKGAKDGELNWPRGICAMAGGLVATCDSSNHRVCV----FDKEGKFVRQFGGYGSGSGQ 763
Query: 101 RGIAVGPDNS---IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
A G +S IVV+D NHR+ VF +G + FG G + +P +AV +
Sbjct: 764 LDSAAGLASSKLRIVVSDRYNHRISVFGLEGDHLFSFGGHGQGNAKFNNPWGVAVDDLGS 823
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSD 216
+ V+D +NHRVQ+FD NG+ F+ KFG+ G+ GQL P +IAVS T+ V VSD
Sbjct: 824 IYVADKDNHRVQVFDKNGQ-------FIAKFGTFGHLPGQLNSPLFIAVSKVTHHVYVSD 876
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
S+NHR+ +FD G + SFG EG GQ KFPRG+A+D Q I + DSGNNRIQIF G
Sbjct: 877 SSNHRISVFDPQGIHLFSFGEEGFHGGQFKFPRGIAIDSQENIIIADSGNNRIQIFDAQG 936
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
QF+ +FG WG G G+ KG+E V V +G+I+V DRENHRIQ+F
Sbjct: 937 QFVSSFGTWGGGAGQLKGVEDVCVTIDGSIVVTDRENHRIQIF 979
>gi|17553622|ref|NP_499028.1| Protein NHL-1 [Caenorhabditis elegans]
gi|6226931|sp|Q03601.2|NHL1_CAEEL RecName: Full=RING finger protein nhl-1
gi|3877606|emb|CAA79562.1| Protein NHL-1 [Caenorhabditis elegans]
Length = 974
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/283 (43%), Positives = 168/283 (59%), Gaps = 20/283 (7%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV-----FLAFTWP 100
G +G++ G WPRGI + DSSNHRV V FD V + A
Sbjct: 703 GRKGAKDGELNWPRGICALSGGLVATCDSSNHRVCV----FDKDGKFVRQFGGYGAGAGQ 758
Query: 101 RGIAVGPDNS---IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
A G +S ++V+D NHR+ VF +G + FG G + +P +AV +
Sbjct: 759 LDSAAGLASSKLRVIVSDRYNHRISVFGLEGDHLFSFGGHGQGNAKFNNPWGVAVDDLGS 818
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSD 216
+ V+D +NHRVQ+FD NG+ F+ KFGS G+ GQL P +IAVS T+ V VSD
Sbjct: 819 IYVADKDNHRVQVFDKNGQ-------FIAKFGSFGHLPGQLNSPLFIAVSRVTHHVYVSD 871
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
S+NHR+ +FD +G + SFG EG GQ KFPRG+A+D Q + + DSGNNRIQ+F G
Sbjct: 872 SSNHRISVFDPHGVHLFSFGEEGFHGGQFKFPRGIAIDSQENLIIADSGNNRIQVFDAQG 931
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
QF+ +FG WG G G+ KG+E V V ++G+I+V DRENHRIQ+F
Sbjct: 932 QFVSSFGTWGGGAGQLKGVEDVCVTADGSIVVTDRENHRIQIF 974
>gi|341877854|gb|EGT33789.1| CBN-NHL-1 protein [Caenorhabditis brenneri]
Length = 976
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/304 (42%), Positives = 175/304 (57%), Gaps = 20/304 (6%)
Query: 25 GQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP 84
G+ + ++ + R + G +G + G WPRGI + DSSNHRV V
Sbjct: 684 GRSASREAGEWRARGRPRAVFGRKGGKDGELNWPRGICALSGGLVATCDSSNHRVCV--- 740
Query: 85 HFDLKTNCV-----FLAFTWPRGIAVGPDNS---IVVADSSNHRVQVFQSDGTFVGKFGS 136
FD + V + + + A G +S IVV+D NHR+ VF +G + FG
Sbjct: 741 -FDKEGKFVRQFGGYGSGSGQLDSAAGLASSKLRIVVSDRYNHRISVFGLEGDHLFSFGG 799
Query: 137 MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAG 196
G + +P +AV + + V+D +NHRVQ+FD NG+ F+ KFGS G+ G
Sbjct: 800 HGQGNAKFNNPWGVAVDDLGSIYVADKDNHRVQVFDKNGQ-------FIAKFGSFGHLPG 852
Query: 197 QLEHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD 255
QL P +IAVS T+ V VSDS+NHR+ +FD +G + SFG EG GQ KFPRG+A+D
Sbjct: 853 QLNSPLFIAVSRITHHVYVSDSSNHRISVFDPHGVHLFSFGEEGFHGGQFKFPRGIAIDS 912
Query: 256 QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHR 315
Q I + DSGNNRIQIF GQF+ +FG WG G G+ KG+E V V +G I+V DRENHR
Sbjct: 913 QENIIIADSGNNRIQIFDAQGQFVSSFGTWGGGAGQLKGVEDVCVTVDGAIVVTDRENHR 972
Query: 316 IQVF 319
IQ+F
Sbjct: 973 IQIF 976
>gi|425441003|ref|ZP_18821293.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9717]
gi|389718438|emb|CCH97621.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9717]
Length = 350
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 180/325 (55%), Gaps = 25/325 (7%)
Query: 6 EAKNINSCFLLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGP 65
E ++++ L LV+ +G + F GS GS G F PRGIA G
Sbjct: 13 EKRSLSKALLKSFSLVTAT-AIGCISVATSATAASFSFAFGSEGSGNGQFMLPRGIAAGR 71
Query: 66 DNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----------FTWPRGIAVGPDNSIVVA 114
+I VAD+ N+RVQV ++ VF + F P GIAV +I VA
Sbjct: 72 GGNIYVADTDNNRVQV------FNSSGVFQSAFGSQGSGNGQFRSPYGIAVSRSGNIYVA 125
Query: 115 DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 174
D+ N+RVQVF S G F FGS G GQ + P+ IAV ++ V V+D+ N RVQ+F+
Sbjct: 126 DTDNNRVQVFNSSGVFQSAFGSQGTVNGQFQGPYAIAVGSSGNVYVADTGNFRVQVFN-- 183
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
S+G F FGS G GQ + + IAV ++ V V+D+ N+RVQ+FD G +
Sbjct: 184 -----SNGGFQFAFGSFGTGDGQFQGSYGIAVGSSGHVYVADTFNNRVQVFDDRGVFQFA 238
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
FGS+GS G+ + P G+AVD +GYI V D+ N+R+Q+F G F FG +G+G+GEF
Sbjct: 239 FGSQGSGNGEFESPYGIAVDSRGYIYVTDTFNDRVQVFDDRGVFQSTFGSFGTGNGEFSS 298
Query: 295 LEGVAVMSNGNILVCDRENHRIQVF 319
G+AV S GNI V D N+R+QVF
Sbjct: 299 PYGIAVGSRGNIYVADTVNNRVQVF 323
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV---------CFPHFDLKTN 91
QF GS+GS G F P GIAV I V D+ N RVQV F F
Sbjct: 235 FQFAFGSQGSGNGEFESPYGIAVDSRGYIYVTDTFNDRVQVFDDRGVFQSTFGSFGTGNG 294
Query: 92 CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
F+ P GIAVG +I VAD+ N+RVQVF++
Sbjct: 295 ----EFSSPYGIAVGSRGNIYVADTVNNRVQVFRT 325
>gi|449689363|ref|XP_002155572.2| PREDICTED: E3 ubiquitin-protein ligase TRIM71-like [Hydra
magnipapillata]
Length = 753
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/300 (41%), Positives = 171/300 (57%), Gaps = 24/300 (8%)
Query: 32 RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP------- 84
R +Y + K G GS+ F P G+A + I VADS NHR+Q P
Sbjct: 466 RREYSEVGPSLLKFGQYGSKRREFKSPFGVASDNEGFIYVADSYNHRIQTFGPRGEFVHM 525
Query: 85 ---HFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKA 141
H D K F P +AV P++ +VV D+ N+R+QVF +G F+ KFG G K
Sbjct: 526 FGSHGDRKGE-----FNCPTDVAVSPNSKLVVCDNGNNRIQVFGRNGNFIAKFGREGIKN 580
Query: 142 GQLEHPHYIAVSNTNR-VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
G + P + VS +R +IV+D++NHR+QIF SDG F+ KFG G++ GQ
Sbjct: 581 GNFKSPWGVTVSPVSREIIVADTDNHRIQIF-------SSDGKFIMKFGCNGDRPGQFNS 633
Query: 201 PHYIAVSNTNR-VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYI 259
P Y+A + N ++VSDS NHR+QIFD G+ I FG++G E+GQ PRG+++D I
Sbjct: 634 PCYVAANAENEHILVSDSKNHRIQIFDRRGKFIQLFGTQGQEDGQFNHPRGLSMDIANNI 693
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V D GN+R+QI T G+ ++ G G+GDG+ E VAV NG I+V D N+RIQVF
Sbjct: 694 IVSDMGNHRLQILTYAGKMVKCVGTEGNGDGQLSFPESVAVTPNGFIIVSDLSNNRIQVF 753
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
+IF +N R + G + KFG G+K + + P +A N + V+DS NHR+Q F
Sbjct: 460 EIFVINRREYSEVGPSLLKFGQYGSKRREFKSPFGVASDNEGFIYVADSYNHRIQTFGPR 519
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G + FGS G +G+ P VAV + V D+GNNRIQ+F +G F+ FG G
Sbjct: 520 GEFVHMFGSHGDRKGEFNCPTDVAVSPNSKLVVCDNGNNRIQVFGRNGNFIAKFGREGIK 579
Query: 289 DGEFKGLEGVAVMS-NGNILVCDRENHRIQVF 319
+G FK GV V + I+V D +NHRIQ+F
Sbjct: 580 NGNFKSPWGVTVSPVSREIIVADTDNHRIQIF 611
>gi|156402800|ref|XP_001639778.1| predicted protein [Nematostella vectensis]
gi|156226908|gb|EDO47715.1| predicted protein [Nematostella vectensis]
Length = 750
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/307 (38%), Positives = 175/307 (57%), Gaps = 27/307 (8%)
Query: 27 VGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNS-IVVADSSNHRVQVCFPH 85
V T R Y + + GS G+ G F+ P +A+ +N +V D +NHRVQV
Sbjct: 457 VNVTGRMNYKKLGKAIRTFGSEGAGGGEFSIPWAVAIDEENECFIVTDCNNHRVQV---- 512
Query: 86 FDLKTNCVFL-----------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKF 134
FD N VF+ F P+GIA + IVVAD +NHRVQ+F DG F+ KF
Sbjct: 513 FDF--NGVFMFKFGCEGIDKGQFKNPKGIARLTNGHIVVADFNNHRVQIFNEDGRFLRKF 570
Query: 135 G--SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
G G + G + HP +A + +++S+ +NHR+Q+FDVNG + FGS G
Sbjct: 571 GFYGTGGEPGSMNHPCGVACTPGGLILISEQDNHRIQMFDVNGEPIRM-------FGSQG 623
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
GQ +PH++ V+ ++V+V+D N R+Q+F++ G + SFG EG++ G P GV
Sbjct: 624 FTKGQFIYPHHLCVTQRDKVVVADCVNDRIQVFNIEGECLFSFGKEGTQNGLFDGPEGVT 683
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRE 312
DD+ I V D N+R+QIF +G F+ AFG +G +G F+ G+AV ++GN++V D
Sbjct: 684 CDDEDNILVSDYHNHRVQIFNAEGGFVAAFGQFGDEEGNFRNPCGIAVTNDGNVVVVDSG 743
Query: 313 NHRIQVF 319
NHRIQ+F
Sbjct: 744 NHRIQIF 750
>gi|156402654|ref|XP_001639705.1| predicted protein [Nematostella vectensis]
gi|156226835|gb|EDO47642.1| predicted protein [Nematostella vectensis]
Length = 711
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 170/283 (60%), Gaps = 14/283 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------ 96
KIGS+G++ G F P +A D +I V D N RVQ F F +
Sbjct: 437 MKIGSQGTKSGEFRQPSSVATDTDGNIYVTDFVNCRVQK-FDMFGKHLKDIGTKGSKDGQ 495
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
P G+ VG D +++V+D NHRVQ+F +G FV K G G++ G HP +A++
Sbjct: 496 LMNPCGVVVGSDGTLIVSDWDNHRVQMFSPEGKFVSKIGRKGSENGNFLHPSGLALNQDG 555
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++V D +N+RVQ+ + DG+ V FGS+GN GQL+ P ++AV+ N +V+D
Sbjct: 556 DLVVIDKDNNRVQVLKL-------DGSHVMSFGSLGNADGQLDCPSHVAVTPDNGYLVTD 608
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ N+R+ FD +G + SFG++GS EG+L P G+A+D +G+I + D N+R+Q+ +P+G
Sbjct: 609 TGNNRIVKFDASGNHVMSFGTKGSGEGRLDRPAGIAIDPEGFIIISDFQNHRVQVHSPEG 668
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+F FG G+ +G+FK G+A+ +G+++V DR NHRIQVF
Sbjct: 669 EFYATFGSEGNIEGQFKFPSGIALTLDGHVIVADRHNHRIQVF 711
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%)
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
V GS+G++ G+ + P VA D G I V D N R+Q F G+ L+ G GS DG
Sbjct: 435 VFMKIGSQGTKSGEFRQPSSVATDTDGNIYVTDFVNCRVQKFDMFGKHLKDIGTKGSKDG 494
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ GV V S+G ++V D +NHR+Q+F
Sbjct: 495 QLMNPCGVVVGSDGTLIVSDWDNHRVQMF 523
>gi|156364546|ref|XP_001626408.1| predicted protein [Nematostella vectensis]
gi|156213283|gb|EDO34308.1| predicted protein [Nematostella vectensis]
Length = 754
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 171/301 (56%), Gaps = 26/301 (8%)
Query: 32 RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN 91
R +Y + K G GS+ F P G+A+ + I VADS NHRVQV L T
Sbjct: 467 RREYKEVGGTIMKFGQYGSKKREFKSPFGVAIDNEGRIYVADSYNHRVQV------LGTR 520
Query: 92 CVFLA-----------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNK 140
F+ F P + + +++ D+ N+RVQV +G F+GKFG G
Sbjct: 521 GEFITSFGSHGERRGEFNCPTDVDIDNRGRVIICDNGNNRVQVLNRNGGFIGKFGREGTG 580
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
G + P +AV+ N ++V+D N+RVQ+F +G F+ KFGS G++ GQ
Sbjct: 581 NGYFKSPWGLAVTANNEIVVADMENNRVQMF-------SPEGKFMMKFGSPGDRPGQFNA 633
Query: 201 PHYIAVSNTN-RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYI 259
P Y+ V+N + ++ VSDS NHR+Q+FD+NG I SFGS+G+ +GQ PRG+A+D G++
Sbjct: 634 PGYLLVNNEDDQIFVSDSKNHRIQVFDMNGVYIRSFGSQGAGKGQFMHPRGLAMDIAGHL 693
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN-GNILVCDRENHRIQV 318
+ D GN+R+QI G+F++ G GSGDG+ E VA+M N G I+V D N+RI V
Sbjct: 694 IIADMGNHRLQILNSAGEFVKEIGSEGSGDGQLSFPESVAIMPNSGYIVVSDLSNNRIHV 753
Query: 319 F 319
F
Sbjct: 754 F 754
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 92/150 (61%)
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
I VN R ++ G + KFG G+K + + P +A+ N R+ V+DS NHRVQ+ G
Sbjct: 462 ILVVNRREYKEVGGTIMKFGQYGSKKREFKSPFGVAIDNEGRIYVADSYNHRVQVLGTRG 521
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
ITSFGS G G+ P V +D++G + + D+GNNR+Q+ +G F+ FG G+G+
Sbjct: 522 EFITSFGSHGERRGEFNCPTDVDIDNRGRVIICDNGNNRVQVLNRNGGFIGKFGREGTGN 581
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FK G+AV +N I+V D EN+R+Q+F
Sbjct: 582 GYFKSPWGLAVTANNEIVVADMENNRVQMF 611
>gi|219851088|ref|YP_002465520.1| NHL repeat containing protein [Methanosphaerula palustris E1-9c]
gi|219545347|gb|ACL15797.1| NHL repeat containing protein [Methanosphaerula palustris E1-9c]
Length = 831
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 114/282 (40%), Positives = 161/282 (57%), Gaps = 24/282 (8%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----------F 97
GS G F++P GIA ++ VADS N+RVQ ++ +F+ F
Sbjct: 329 GSPSGAFSYPYGIAFDSAGNVYVADSGNNRVQ------KFTSSGLFITMWGTSGSDNGQF 382
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P GIAV ++ VAD N+RVQ F S GT++ K+G+ G +GQ P+ +A+
Sbjct: 383 RTPTGIAVDSAGNVYVADRDNNRVQKFTSTGTYLAKWGTSGTGSGQFSSPYGVAIDGAGN 442
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
V V D NHRVQ F S G FV K+GS G++ GQ +P IA+ T V V+D
Sbjct: 443 VYVVDRGNHRVQ-------KFTSSGIFVAKWGSSGSENGQFSYPEGIAIDGTGNVYVADE 495
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
+NHRV+ F G +T++G++GSE+GQ +P GVAVD G + V DSGNNR+Q FT G
Sbjct: 496 SNHRVEKFTSIGTFLTAWGTKGSEDGQFAYPDGVAVDSLGNVYVADSGNNRVQKFTSSGA 555
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F+ +G G+G G+F +AV S+GN+ V + N+R+Q F
Sbjct: 556 FITDWGSSGTGSGQFSSPVDIAVDSSGNVYVAEYWNNRVQKF 597
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 113/282 (40%), Positives = 162/282 (57%), Gaps = 24/282 (8%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----------F 97
GS G F++P GIA ++ +ADS N+RVQ ++ +F+ F
Sbjct: 29 GSPDGAFSYPYGIAFDSAGNVYIADSGNNRVQ------KFTSSGLFITMWGTSGSDNGQF 82
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P GIAV ++ VAD N+RVQ F S GT++ K+G+ G +GQ P+ +A+ +
Sbjct: 83 RTPTGIAVDSAGNVYVADRDNNRVQKFTSTGTYLAKWGTSGTGSGQFSSPYGVAIDSAGN 142
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
V V D NHRVQ F S G FV K+GS G++ GQ +P IA+ T V V+D
Sbjct: 143 VYVVDRGNHRVQ-------KFTSSGIFVAKWGSSGSENGQFSYPEGIAIDGTGNVYVADE 195
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
+NHRV+ F G +T++G++GSE+GQ +P GVAVD G + V DSGNNR+Q FT G
Sbjct: 196 SNHRVEKFTSIGTFLTAWGTKGSEDGQFAYPDGVAVDSLGNVYVADSGNNRVQKFTSSGA 255
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F+ +G G+G G+F +AV S+GN+ V + N+R+Q F
Sbjct: 256 FITDWGSSGTGSGQFSSPVDIAVDSSGNVYVAEYWNNRVQKF 297
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 152/303 (50%), Gaps = 42/303 (13%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--------- 96
G+ GS+ G F P GIAV ++ VAD N+RVQ + +LA
Sbjct: 73 GTSGSDNGQFRTPTGIAVDSAGNVYVADRDNNRVQ------KFTSTGTYLAKWGTSGTGS 126
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F+ P G+A+ ++ V D NHRVQ F S G FV K+GS G++ GQ +P IA+
Sbjct: 127 GQFSSPYGVAIDSAGNVYVVDRGNHRVQKFTSSGIFVAKWGSSGSENGQFSYPEGIAIDG 186
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
T V V+D +NHRV+ F S GTF+ +G+ G++ GQ +P +AV + V V
Sbjct: 187 TGNVYVADESNHRVE-------KFTSIGTFLTAWGTKGSEDGQFAYPDGVAVDSLGNVYV 239
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+DS N+RVQ F +G IT +GS G+ GQ P +AVD G + V + NNR+Q F P
Sbjct: 240 ADSGNNRVQKFTSSGAFITDWGSSGTGSGQFSSPVDIAVDSSGNVYVAEYWNNRVQKFAP 299
Query: 275 D-----------------GQFLRAFGCW-GSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
++ W GS G F G+A S GN+ V D N+R+
Sbjct: 300 QTSLPTVTPVATPVPTTAADIYQSVAKWSGSPSGAFSYPYGIAFDSAGNVYVADSGNNRV 359
Query: 317 QVF 319
Q F
Sbjct: 360 QKF 362
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 130/240 (54%), Gaps = 24/240 (10%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--------- 96
G+ GS+ G F P GIAV ++ VAD N+RVQ + +LA
Sbjct: 373 GTSGSDNGQFRTPTGIAVDSAGNVYVADRDNNRVQ------KFTSTGTYLAKWGTSGTGS 426
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F+ P G+A+ ++ V D NHRVQ F S G FV K+GS G++ GQ +P IA+
Sbjct: 427 GQFSSPYGVAIDGAGNVYVVDRGNHRVQKFTSSGIFVAKWGSSGSENGQFSYPEGIAIDG 486
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
T V V+D +NHRV+ F S GTF+ +G+ G++ GQ +P +AV + V V
Sbjct: 487 TGNVYVADESNHRVE-------KFTSIGTFLTAWGTKGSEDGQFAYPDGVAVDSLGNVYV 539
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+DS N+RVQ F +G IT +GS G+ GQ P +AVD G + V + NNR+Q F P
Sbjct: 540 ADSGNNRVQKFTSSGAFITDWGSSGTGSGQFSSPVDIAVDSSGNVYVAEYWNNRVQKFAP 599
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 105/193 (54%), Gaps = 24/193 (12%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
K G+ G+ G F+ P G+A+ ++ V D NHRVQ ++ +F+A
Sbjct: 418 KWGTSGTGSGQFSSPYGVAIDGAGNVYVVDRGNHRVQ------KFTSSGIFVAKWGSSGS 471
Query: 97 ----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
F++P GIA+ ++ VAD SNHRV+ F S GTF+ +G+ G++ GQ +P +AV
Sbjct: 472 ENGQFSYPEGIAIDGTGNVYVADESNHRVEKFTSIGTFLTAWGTKGSEDGQFAYPDGVAV 531
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
+ V V+DS N+RVQ F S G F+ +GS G +GQ P IAV ++ V
Sbjct: 532 DSLGNVYVADSGNNRVQ-------KFTSSGAFITDWGSSGTGSGQFSSPVDIAVDSSGNV 584
Query: 213 IVSDSNNHRVQIF 225
V++ N+RVQ F
Sbjct: 585 YVAEYWNNRVQKF 597
>gi|425467041|ref|ZP_18846325.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9809]
gi|389830285|emb|CCI27873.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9809]
Length = 342
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/325 (38%), Positives = 176/325 (54%), Gaps = 33/325 (10%)
Query: 6 EAKNINSCFLLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGP 65
E ++++ L LV+ +G + F GS G+ G F PRGIAV
Sbjct: 13 EKRSLSKALLKSFSLVTATA-IGCISVATSATAASFSFAFGSFGTGTGQFMLPRGIAVSR 71
Query: 66 DNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----------FTWPRGIAVGPDNSIVVA 114
I VAD+ N+RVQV ++ VF + F P GIAV ++ VA
Sbjct: 72 SGDIYVADTDNNRVQV------FNSSGVFQSAFGTNGTGTGQFRSPYGIAVSRGGNVYVA 125
Query: 115 DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 174
D+ N+RVQVF S G F FG+ G GQ + P+ IAV ++ V V+D+ N+RVQ+F+
Sbjct: 126 DTDNNRVQVFDSSGVFQSAFGTNGTGTGQFQGPYAIAVGSSGNVYVADTGNNRVQVFN-- 183
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
S G F FGS P+ IAV ++ + V+D+ N+R+Q+F+ G +
Sbjct: 184 -----STGVFQFAFGS--------SSPYGIAVGSSGNIYVADTFNNRIQVFNSTGVFQFA 230
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
FGS+GS G+ P+G+AVD G I V D+ N+R+Q+F P G F AFG GSG+G+F
Sbjct: 231 FGSQGSGNGEFSLPQGIAVDSSGNIYVTDTLNDRVQVFNPSGVFQYAFGSQGSGNGQFSL 290
Query: 295 LEGVAVMSNGNILVCDRENHRIQVF 319
+G+AV S GNI V D N+R+QVF
Sbjct: 291 PQGIAVGSRGNIYVADTANNRVQVF 315
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
QF GS+GS G F+ P+GIAV +I V D+ N RVQV P + F +
Sbjct: 227 FQFAFGSQGSGNGEFSLPQGIAVDSSGNIYVTDTLNDRVQVFNPSGVFQ--YAFGSQGSG 284
Query: 97 ---FTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
F+ P+GIAVG +I VAD++N+RVQVF++
Sbjct: 285 NGQFSLPQGIAVGSRGNIYVADTANNRVQVFRT 317
>gi|198411952|ref|XP_002129827.1| PREDICTED: similar to CG15105 CG15105-PA [Ciona intestinalis]
Length = 186
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 130/192 (67%), Gaps = 7/192 (3%)
Query: 128 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK 187
G F+ FG G+ G L +P ++ N V V D +NHR+Q+F + DG F+ K
Sbjct: 2 GRFIRMFGQEGSGEGDLSYPWGVSTDNMGFVYVCDKDNHRIQVFTL-------DGQFIRK 54
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG +G GQ + P Y+A+++ N+V+VSD+ NHR+Q+FD GR + G EGS +GQLK+
Sbjct: 55 FGRLGTYDGQFDSPLYLAITSDNKVLVSDNGNHRIQVFDKYGRFMFKIGREGSADGQLKY 114
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
PRGVAVD G I+V DSGNNRIQI+ PDG ++ FG WGS G+ KG+EG+ + +G+I+
Sbjct: 115 PRGVAVDAHGNIAVADSGNNRIQIYKPDGSYMTNFGSWGSSAGQLKGIEGICFLPSGDIV 174
Query: 308 VCDRENHRIQVF 319
V DRENHRIQ+F
Sbjct: 175 VSDRENHRIQIF 186
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 107/176 (60%), Gaps = 7/176 (3%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
++P G++ + V D NHR+QVF DG F+ KFG +G GQ + P Y+A+++ N
Sbjct: 18 LSYPWGVSTDNMGFVYVCDKDNHRIQVFTLDGQFIRKFGRLGTYDGQFDSPLYLAITSDN 77
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+V+VSD+ NHR+Q+FD GR F+ K G G+ GQL++P +AV + V+D
Sbjct: 78 KVLVSDNGNHRIQVFDKYGR-------FMFKIGREGSADGQLKYPRGVAVDAHGNIAVAD 130
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
S N+R+QI+ +G +T+FGS GS GQLK G+ G I V D N+RIQIF
Sbjct: 131 SGNNRIQIYKPDGSYMTNFGSWGSSAGQLKGIEGICFLPSGDIVVSDRENHRIQIF 186
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 99/186 (53%), Gaps = 12/186 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC-----FPHFDLKTNCVFLAFTW 99
G GS G ++P G++ + V D NHR+QV F + F
Sbjct: 8 FGQEGSGEGDLSYPWGVSTDNMGFVYVCDKDNHRIQVFTLDGQFIRKFGRLGTYDGQFDS 67
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A+ DN ++V+D+ NHR+QVF G F+ K G G+ GQL++P +AV +
Sbjct: 68 PLYLAITSDNKVLVSDNGNHRIQVFDKYGRFMFKIGREGSADGQLKYPRGVAVDAHGNIA 127
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+DS N+R+QI ++ DG+++ FGS G+ AGQL+ I + ++VSD N
Sbjct: 128 VADSGNNRIQI-------YKPDGSYMTNFGSWGSSAGQLKGIEGICFLPSGDIVVSDREN 180
Query: 220 HRVQIF 225
HR+QIF
Sbjct: 181 HRIQIF 186
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 78/137 (56%), Gaps = 13/137 (9%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------- 95
K G G+ G F P +A+ DN ++V+D+ NHR+QV FD +F
Sbjct: 54 KFGRLGTYDGQFDSPLYLAITSDNKVLVSDNGNHRIQV----FDKYGRFMFKIGREGSAD 109
Query: 96 -AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
+PRG+AV +I VADS N+R+Q+++ DG+++ FGS G+ AGQL+ I
Sbjct: 110 GQLKYPRGVAVDAHGNIAVADSGNNRIQIYKPDGSYMTNFGSWGSSAGQLKGIEGICFLP 169
Query: 155 TNRVIVSDSNNHRVQIF 171
+ ++VSD NHR+QIF
Sbjct: 170 SGDIVVSDRENHRIQIF 186
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
R FKIG GS G +PRG+AV +I VADS N+R+Q+ P TN +W
Sbjct: 97 RFMFKIGREGSADGQLKYPRGVAVDAHGNIAVADSGNNRIQIYKPDGSYMTNFG----SW 152
Query: 100 P---------RGIAVGPDNSIVVADSSNHRVQVF 124
GI P IVV+D NHR+Q+F
Sbjct: 153 GSSAGQLKGIEGICFLPSGDIVVSDRENHRIQIF 186
>gi|425447365|ref|ZP_18827354.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9443]
gi|389732080|emb|CCI03924.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9443]
Length = 358
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 175/319 (54%), Gaps = 13/319 (4%)
Query: 6 EAKNINSCFLLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGP 65
E ++++ L LV+ +G + F GS+GS G F P GIAV
Sbjct: 13 EKRSLSKALLKSFSLVTAT-AIGCISIATSATAASFSFAFGSKGSGNGEFNTPTGIAVDS 71
Query: 66 DNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHR 120
+I VAD+ N+RVQV P ++ F P GIAVG I V D+ N+R
Sbjct: 72 GGNIYVADTFNNRVQVFDPSGVFQSAFGSFGSGDGQFNNPYGIAVGRGGDIYVGDTDNNR 131
Query: 121 VQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQS 180
VQVF G F FGS G+ G+ + P+ IAV + + V+D+ N+RVQ+F+ G
Sbjct: 132 VQVFDPSGVFQSAFGSKGSGDGEFQGPYGIAVGSHGNIYVADTANNRVQVFNYRG----- 186
Query: 181 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGS 240
F+ FGS G+ G+ + IAV ++ + V+D+ N RVQ+FD +G +FGS GS
Sbjct: 187 --VFLFAFGSKGSGDGEFQGSDGIAVDSSGNIYVADTLNDRVQVFDPSGVFQFTFGSTGS 244
Query: 241 EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
+G+ +P+G+AVD G I V D+ N+R+Q+F G F FG +G+GDG+F G+AV
Sbjct: 245 GDGEFSWPQGIAVDSSGNIYVADTNNSRVQVFNYRGAFQSTFGGYGTGDGQFSFPYGIAV 304
Query: 301 MSNGNILVCDRENHRIQVF 319
S GNI V D + +R+QVF
Sbjct: 305 GSGGNIYVADMDTNRVQVF 323
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 134/239 (56%), Gaps = 12/239 (5%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
Q GS GS G F P GIAVG I V D+ N+RVQV P ++
Sbjct: 94 FQSAFGSFGSGDGQFNNPYGIAVGRGGDIYVGDTDNNRVQVFDPSGVFQSAFGSKGSGDG 153
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GIAVG +I VAD++N+RVQVF G F+ FGS G+ G+ + IAV ++
Sbjct: 154 EFQGPYGIAVGSHGNIYVADTANNRVQVFNYRGVFLFAFGSKGSGDGEFQGSDGIAVDSS 213
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+ V+D+ N RVQ+FD +G VFQ FGS G+ G+ P IAV ++ + V+
Sbjct: 214 GNIYVADTLNDRVQVFDPSG-VFQF------TFGSTGSGDGEFSWPQGIAVDSSGNIYVA 266
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
D+NN RVQ+F+ G ++FG G+ +GQ FP G+AV G I V D NR+Q+F+P
Sbjct: 267 DTNNSRVQVFNYRGAFQSTFGGYGTGDGQFSFPYGIAVGSGGNIYVADMDTNRVQVFSP 325
>gi|449664005|ref|XP_004205853.1| PREDICTED: E3 ubiquitin-protein ligase TRIM71-like [Hydra
magnipapillata]
Length = 732
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 162/286 (56%), Gaps = 20/286 (6%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------- 95
F+ GS G E G P GI D +I+VAD SN+R+QV FD K + +
Sbjct: 458 FQFGSEGEEGGQLCRPWGICCDKDGNIIVADRSNNRIQV----FDQKGKFISMFGSAGFR 513
Query: 96 --AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F P G+ V N I+VAD NHRVQ+F+ DG+++ KFG GNK GQ +P +A +
Sbjct: 514 NGQFDRPAGVCVDNQNRIIVADKDNHRVQIFKLDGSYILKFGDRGNKNGQFTYPWDVAAN 573
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+ +++VSD+ NHR+Q+F SDGTF+ K+G G + P +A ++ ++
Sbjct: 574 SQGQILVSDTRNHRIQLF-------SSDGTFLNKYGFDGPLWKHFDSPRGVAFNHEGHMV 626
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
V+D NNHR+ + + + G+EGS GQ P+GV +D +G I V DS N+R+QIF
Sbjct: 627 VTDFNNHRLLVIHQDFQTARFLGTEGSNNGQFMRPQGVTIDHEGNIIVADSKNHRVQIFQ 686
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
P+G F FG +G+ G+ G+ V +G ILV D N+RIQ F
Sbjct: 687 PNGNFYTKFGVFGTMVGQLDRPSGLCVSPDGIILVVDFGNNRIQAF 732
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 123/245 (50%), Gaps = 20/245 (8%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL- 95
QK + GS G G F P G+ V N I+VAD NHRVQ+ F L + +
Sbjct: 499 QKGKFISMFGSAGFRNGQFDRPAGVCVDNQNRIIVADKDNHRVQI----FKLDGSYILKF 554
Query: 96 --------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHP 147
FT+P +A I+V+D+ NHR+Q+F SDGTF+ K+G G + P
Sbjct: 555 GDRGNKNGQFTYPWDVAANSQGQILVSDTRNHRIQLFSSDGTFLNKYGFDGPLWKHFDSP 614
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
+A ++ ++V+D NNHR+ V D G+ G+ GQ P + +
Sbjct: 615 RGVAFNHEGHMVVTDFNNHRL-------LVIHQDFQTARFLGTEGSNNGQFMRPQGVTID 667
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+ +IV+DS NHRVQIF NG T FG G+ GQL P G+ V G I V D GNN
Sbjct: 668 HEGNIIVADSKNHRVQIFQPNGNFYTKFGVFGTMVGQLDRPSGLCVSPDGIILVVDFGNN 727
Query: 268 RIQIF 272
RIQ F
Sbjct: 728 RIQAF 732
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 83/145 (57%)
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
GR + G +FGS G + GQL P I +IV+D +N+R+Q+FD G+ I+
Sbjct: 447 GRNYSGIGQSYFQFGSEGEEGGQLCRPWGICCDKDGNIIVADRSNNRIQVFDQKGKFISM 506
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
FGS G GQ P GV VD+Q I V D N+R+QIF DG ++ FG G+ +G+F
Sbjct: 507 FGSAGFRNGQFDRPAGVCVDNQNRIIVADKDNHRVQIFKLDGSYILKFGDRGNKNGQFTY 566
Query: 295 LEGVAVMSNGNILVCDRENHRIQVF 319
VA S G ILV D NHRIQ+F
Sbjct: 567 PWDVAANSQGQILVSDTRNHRIQLF 591
>gi|166364150|ref|YP_001656423.1| hypothetical protein MAE_14090 [Microcystis aeruginosa NIES-843]
gi|166086523|dbj|BAG01231.1| hypothetical protein MAE_14090 [Microcystis aeruginosa NIES-843]
Length = 342
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 123/323 (38%), Positives = 173/323 (53%), Gaps = 29/323 (8%)
Query: 6 EAKNINSCFLLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGP 65
E ++++ L LV+ +G + F GS+G+ G F PRGIAV
Sbjct: 13 EKRSLSKALLKSFSLVTAT-AIGCISVATSATAASFSFAFGSQGTGNGEFESPRGIAVSR 71
Query: 66 DNSIVVADSSNHRVQV---------CFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADS 116
I VAD+ N+RVQV F F T F P GIAV ++ VAD+
Sbjct: 72 SGDIYVADTDNNRVQVFNSSGVFQSAFGSFGTGTG----QFRSPYGIAVSRGGNVYVADT 127
Query: 117 SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
N+RVQVF S G F FG+ G GQ + P+ IAV ++ V V+D+ N+R+Q+F+
Sbjct: 128 DNNRVQVFDSSGVFQSAFGTNGTGTGQFQGPYAIAVGSSGNVYVADTFNNRIQVFN---- 183
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
S G F FGS P+ IAV ++ + V+D+ N+R+Q+F+ G +FG
Sbjct: 184 ---STGVFQFAFGS--------SSPYGIAVGSSGNIYVADTFNNRIQVFNSTGVFQFAFG 232
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
S+G G+ P G+AVD GYI V D+ N+R+Q+F P G F FG +G+G+GEF
Sbjct: 233 SQGLGNGEFNSPFGIAVDSSGYIYVTDTFNDRVQVFNPSGVFQSTFGSFGTGNGEFSLPY 292
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
G+AV S GNI V D N+R+QVF
Sbjct: 293 GIAVGSRGNIYVADTANNRVQVF 315
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
QF GS+G G F P GIAV I V D+ N RVQV P ++
Sbjct: 227 FQFAFGSQGLGNGEFNSPFGIAVDSSGYIYVTDTFNDRVQVFNPSGVFQSTFGSFGTGNG 286
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
F+ P GIAVG +I VAD++N+RVQVF++
Sbjct: 287 EFSLPYGIAVGSRGNIYVADTANNRVQVFRT 317
>gi|221121399|ref|XP_002166121.1| PREDICTED: E3 ubiquitin-protein ligase TRIM71-like [Hydra
magnipapillata]
Length = 746
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 156/272 (57%), Gaps = 21/272 (7%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------AFTWPRGIAVGPD 108
P G+ D I+V D SNH+VQV FD+ + +P GIAV
Sbjct: 486 PWGLVCNKDGDIIVTDHSNHKVQV----FDVNGKLLHQFGVRGKDDGEIWYPTGIAVDKY 541
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
++I VAD NHR+Q + DG F+ K+GS G GQL+ P I + NR+IV+D +NHRV
Sbjct: 542 SNIYVADHGNHRIQAYTGDGKFIRKYGSRGTGDGQLKGPCGICIDRENRLIVTDRDNHRV 601
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
QIFD+ DG F+ FG G + G++ P +++V+ N +++SD+NN+RVQIFD N
Sbjct: 602 QIFDL-------DGKFLLAFGGYGIQDGKMNSPRHVSVTMENNIVISDTNNYRVQIFDRN 654
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGS- 287
G+ I+ FGS+G+ E Q P G+ +D + I + D N +QIF +G L+ G GS
Sbjct: 655 GKFISKFGSKGTLEAQFMCPSGIGLDGENNIVIADFRNANVQIFNEEGNLLKVLGSEGSI 714
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G F G+ V S+GNILV DR H+I +F
Sbjct: 715 SAGIFSKPTGLFVSSSGNILVADRGTHKIYLF 746
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 127/245 (51%), Gaps = 25/245 (10%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---- 95
+L + G RG + G +P GIAV ++I VAD NHR+Q + F+
Sbjct: 515 KLLHQFGVRGKDDGEIWYPTGIAVDKYSNIYVADHGNHRIQA------YTGDGKFIRKYG 568
Query: 96 -------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
P GI + +N ++V D NHRVQ+F DG F+ FG G + G++ P
Sbjct: 569 SRGTGDGQLKGPCGICIDRENRLIVTDRDNHRVQIFDLDGKFLLAFGGYGIQDGKMNSPR 628
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 208
+++V+ N +++SD+NN+RVQIFD NG+ F+ KFGS G Q P I +
Sbjct: 629 HVSVTMENNIVISDTNNYRVQIFDRNGK-------FISKFGSKGTLEAQFMCPSGIGLDG 681
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGS-EEGQLKFPRGVAVDDQGYISVGDSGNN 267
N ++++D N VQIF+ G ++ GSEGS G P G+ V G I V D G +
Sbjct: 682 ENNIVIADFRNANVQIFNEEGNLLKVLGSEGSISAGIFSKPTGLFVSSSGNILVADRGTH 741
Query: 268 RIQIF 272
+I +F
Sbjct: 742 KIYLF 746
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 96/156 (61%), Gaps = 7/156 (4%)
Query: 171 FDVN---GRVFQSDGTFVGKFGSMGNKAGQLEHPHY----IAVSNTNRVIVSDSNNHRVQ 223
F+VN G + G + KFGS G + + Y + + +IV+D +NH+VQ
Sbjct: 449 FEVNVSSGVDIEKIGPMLTKFGSGGVTSSLAKDDSYEPWGLVCNKDGDIIVTDHSNHKVQ 508
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
+FDVNG+++ FG G ++G++ +P G+AVD I V D GN+RIQ +T DG+F+R +G
Sbjct: 509 VFDVNGKLLHQFGVRGKDDGEIWYPTGIAVDKYSNIYVADHGNHRIQAYTGDGKFIRKYG 568
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+GDG+ KG G+ + ++V DR+NHR+Q+F
Sbjct: 569 SRGTGDGQLKGPCGICIDRENRLIVTDRDNHRVQIF 604
>gi|443695248|gb|ELT96190.1| hypothetical protein CAPTEDRAFT_90967 [Capitella teleta]
Length = 682
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 159/284 (55%), Gaps = 14/284 (4%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC-----FPHFDLKTNCVFL 95
LQF G GS G P GI D IV+AD SN+R+Q+ F H
Sbjct: 408 LQF--GVEGSADGELCRPWGICTHRDGYIVIADRSNNRIQIFTQEGKFHHKFGAAGSRNG 465
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P G+A I+VAD NHR+Q+F DGTF+ KFG G+K GQ +P +AVS+
Sbjct: 466 QFDRPAGVACNAQGQIIVADKDNHRIQIFAFDGTFLLKFGEKGSKNGQFNYPWDVAVSHE 525
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
RV+VSD+ NHRVQ+F SDG F+ K+G G+ + P + +N ++V+
Sbjct: 526 GRVLVSDTRNHRVQLFS-------SDGQFINKYGFEGSLWKHFDSPRGVCFNNEGHMVVT 578
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D NNHR+ + + + GSEGS GQ P+GV VD +G I V DS N+RIQ+F P+
Sbjct: 579 DFNNHRLLVIHPDFQSARFLGSEGSANGQFLRPQGVCVDQEGNIIVADSRNHRIQVFQPN 638
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL FG GSG G+ G+ + S+G ILV D N+R+Q+F
Sbjct: 639 GNFLCKFGTPGSGVGQLDRPSGLCLSSDGAILVVDFGNNRVQIF 682
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 130/249 (52%), Gaps = 24/249 (9%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
+ Q+ + K G+ GS G F P G+A I+VAD NHR+Q+ + F
Sbjct: 447 FTQEGKFHHKFGAAGSRNGQFDRPAGVACNAQGQIIVADKDNHRIQI------FAFDGTF 500
Query: 95 L-----------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
L F +P +AV + ++V+D+ NHRVQ+F SDG F+ K+G G+
Sbjct: 501 LLKFGEKGSKNGQFNYPWDVAVSHEGRVLVSDTRNHRVQLFSSDGQFINKYGFEGSLWKH 560
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
+ P + +N ++V+D NNHR+ + + FQS F+ GS G+ GQ P
Sbjct: 561 FDSPRGVCFNNEGHMVVTDFNNHRLLVIHPD---FQS-ARFL---GSEGSANGQFLRPQG 613
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
+ V +IV+DS NHR+Q+F NG + FG+ GS GQL P G+ + G I V D
Sbjct: 614 VCVDQEGNIIVADSRNHRIQVFQPNGNFLCKFGTPGSGVGQLDRPSGLCLSSDGAILVVD 673
Query: 264 SGNNRIQIF 272
GNNR+QIF
Sbjct: 674 FGNNRVQIF 682
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 121/238 (50%), Gaps = 40/238 (16%)
Query: 122 QVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR----- 176
+V+ + G+ +FG G+ G+L P I ++++D +N+R+QIF G+
Sbjct: 398 RVYSNVGSVSLQFGVEGSADGELCRPWGICTHRDGYIVIADRSNNRIQIFTQEGKFHHKF 457
Query: 177 -----------------------------------VFQSDGTFVGKFGSMGNKAGQLEHP 201
+F DGTF+ KFG G+K GQ +P
Sbjct: 458 GAAGSRNGQFDRPAGVACNAQGQIIVADKDNHRIQIFAFDGTFLLKFGEKGSKNGQFNYP 517
Query: 202 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISV 261
+AVS+ RV+VSD+ NHRVQ+F +G+ I +G EGS PRGV +++G++ V
Sbjct: 518 WDVAVSHEGRVLVSDTRNHRVQLFSSDGQFINKYGFEGSLWKHFDSPRGVCFNNEGHMVV 577
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D N+R+ + PD Q R G GS +G+F +GV V GNI+V D NHRIQVF
Sbjct: 578 TDFNNHRLLVIHPDFQSARFLGSEGSANGQFLRPQGVCVDQEGNIIVADSRNHRIQVF 635
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 84/146 (57%)
Query: 174 NGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT 233
+GRV+ + G+ +FG G+ G+L P I ++++D +N+R+QIF G+
Sbjct: 396 SGRVYSNVGSVSLQFGVEGSADGELCRPWGICTHRDGYIVIADRSNNRIQIFTQEGKFHH 455
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
FG+ GS GQ P GVA + QG I V D N+RIQIF DG FL FG GS +G+F
Sbjct: 456 KFGAAGSRNGQFDRPAGVACNAQGQIIVADKDNHRIQIFAFDGTFLLKFGEKGSKNGQFN 515
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
VAV G +LV D NHR+Q+F
Sbjct: 516 YPWDVAVSHEGRVLVSDTRNHRVQLF 541
>gi|395646873|ref|ZP_10434733.1| PKD domain containing protein [Methanofollis liminatans DSM 4140]
gi|395443613|gb|EJG08370.1| PKD domain containing protein [Methanofollis liminatans DSM 4140]
Length = 2489
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 157/286 (54%), Gaps = 13/286 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC--FPHFDLKTNCVFLA- 96
R + GSRG+ G FT+P GI +I V D N R+Q F K +
Sbjct: 1010 RFISEWGSRGTADGEFTYPDGIVRDTAGNIYVVDYGNDRIQKFNRTGSFITKWGSSGYSE 1069
Query: 97 ---FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F P GIAV D+++ V D+ N R+Q F S GTF+ K+GS G GQ + P I +
Sbjct: 1070 DGEFNMPHGIAVDSDSNVYVTDTWNSRIQKFDSTGTFIAKWGSYGTGDGQFDFPQGITID 1129
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+ V+D+ N R+Q FD S+GTF+ K+GS G G+ + PH I V V
Sbjct: 1130 ADGSIYVADNANQRIQKFD-------SNGTFITKWGSGGTGDGEFDRPHGIVVDADGNVF 1182
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
VSD+ N+ +Q F G IT +G+ GS +GQ PRG+AVD +G + V DS N+RIQIF
Sbjct: 1183 VSDAGNNNIQKFTSTGTFITKWGTAGSGDGQFNVPRGIAVDSRGNVFVADSLNHRIQIFD 1242
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G FL FG +G+G+GEF V + GN+ V D NHRIQ+F
Sbjct: 1243 TNGTFLTEFGSYGTGEGEFNEPWDTLVDNAGNVYVTDARNHRIQIF 1288
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/328 (38%), Positives = 175/328 (53%), Gaps = 34/328 (10%)
Query: 9 NINSCFLLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNS 68
NI + +L T +++G+ Q + K GS GS F P GIAV P
Sbjct: 9 NIFTVLILCTYIIAGV---------QAAESYEFVTKWGSYGSGDAQFIRPEGIAVDPGGD 59
Query: 69 IVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQV 123
+ VAD N+R+Q D T F++PRG+AV + + V + +N+RVQ
Sbjct: 60 VYVADPGNNRIQKFSNTGDFITKWGAPGTGAGQFSYPRGVAVDGEGYVYVVEQTNNRVQK 119
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGT 183
F DGT++ +G+ G+ GQ E P IAV N + + V+D+ NHRVQ FD S GT
Sbjct: 120 FDGDGTYIATWGTKGSGEGQFESPGGIAVDNASNIYVTDTVNHRVQKFD-------STGT 172
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
FV ++G+ G GQ P IA+ + V V D N+R+Q FD NG IT +GSEG G
Sbjct: 173 FVTQWGNQGAGDGQFRFPMAIAIGKNDSVYVGDE-NYRIQKFDANGTFITKWGSEGMGNG 231
Query: 244 QLKF-PRGVAVDDQGYISVGD----SGNN---RIQIFTPDGQFLRAFGCWGSGDGEFKGL 295
Q + P G AVDDQG + V + +G+ R+Q F +G F+ +G GSGDGEF+
Sbjct: 232 QFTYPPSGAAVDDQGNLFVAEGQYYTGSGLLYRVQKFDSNGTFITKWGYRGSGDGEFQYP 291
Query: 296 EGVAVMSNGNILVCD----RENHRIQVF 319
+GVAV S G + V D R+ HRIQ F
Sbjct: 292 KGVAVDSGGYVYVADGEAQRDYHRIQKF 319
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 160/301 (53%), Gaps = 41/301 (13%)
Query: 47 SRGSEPGCFTW-PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--------- 96
S+GS G F P +AV ++ V D N R+Q FD + F+A
Sbjct: 1538 SQGSGDGQFGLGPDSVAVDRAGNLYVTDPINSRIQ----KFD--NSGTFIAAWGSYGAGI 1591
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F P GIAV D+++ VADS N+R+Q F S GTF+ +G G G+ E P I V
Sbjct: 1592 GQFRSPTGIAVDADSNVYVADSLNNRIQKFSSTGTFLTSWGLRGTGDGEFEEPRGIVVDA 1651
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ V V+D N+R+Q FD S GTF+ +GS + +P +AV + V V
Sbjct: 1652 ESHVYVTDHYNNRIQKFD-------SSGTFITTWGSEPPGDSEFSYPKGVAVDDAGNVYV 1704
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEE-----------GQLKFPRGVAVDDQGYISVGD 263
+D+NNHR+Q FD NG IT++G E S G FP+GVA+D +G++ V D
Sbjct: 1705 ADTNNHRIQKFDANGTFITTWGHEESPSLPGELPVIEANGNFSFPKGVAIDGEGFVYVAD 1764
Query: 264 SGNNRIQIFTPDGQFLRAFGCW--GSGDGEFKGLEGVAVMSNGNILVCDRENH---RIQV 318
SGNNRIQ F +G F+ +G W G GDG+F GL G+AV +G I V D E + RIQ
Sbjct: 1765 SGNNRIQKFDANGTFITKWGGWPVGYGDGQFSGLRGIAVDEDGFIYVADAEEYVIARIQK 1824
Query: 319 F 319
F
Sbjct: 1825 F 1825
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 138/243 (56%), Gaps = 25/243 (10%)
Query: 44 KIGSRG-SEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------ 96
K GS G SE G F P GIAV D+++ V D+ N R+Q FD + F+A
Sbjct: 1061 KWGSSGYSEDGEFNMPHGIAVDSDSNVYVTDTWNSRIQ----KFD--STGTFIAKWGSYG 1114
Query: 97 -----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
F +P+GI + D SI VAD++N R+Q F S+GTF+ K+GS G G+ + PH I
Sbjct: 1115 TGDGQFDFPQGITIDADGSIYVADNANQRIQKFDSNGTFITKWGSGGTGDGEFDRPHGIV 1174
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V V VSD+ N+ +Q F S GTF+ K+G+ G+ GQ P IAV +
Sbjct: 1175 VDADGNVFVSDAGNNNIQ-------KFTSTGTFITKWGTAGSGDGQFNVPRGIAVDSRGN 1227
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
V V+DS NHR+QIFD NG +T FGS G+ EG+ P VD+ G + V D+ N+RIQI
Sbjct: 1228 VFVADSLNHRIQIFDTNGTFLTEFGSYGTGEGEFNEPWDTLVDNAGNVYVTDARNHRIQI 1287
Query: 272 FTP 274
F P
Sbjct: 1288 FEP 1290
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/275 (37%), Positives = 143/275 (52%), Gaps = 26/275 (9%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----------FTWPRGIAVG 106
P G+ + ++ VAD N+R+Q FD N F+ F+ PRGI V
Sbjct: 1454 PHGVVMDAAGNVYVADLYNNRIQ----KFDA--NGTFITKWGSYGSGDGEFSDPRGITVD 1507
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKF-GSMGNKAGQLE-HPHYIAVSNTNRVIVSDSN 164
+ V+D N+R+Q F S GTF+ KF S G+ GQ P +AV + V+D
Sbjct: 1508 SAGYLYVSDYWNNRIQKFDSSGTFITKFVFSQGSGDGQFGLGPDSVAVDRAGNLYVTDPI 1567
Query: 165 NHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 224
N R+Q FD + GTF+ +GS G GQ P IAV + V V+DS N+R+Q
Sbjct: 1568 NSRIQKFD-------NSGTFIAAWGSYGAGIGQFRSPTGIAVDADSNVYVADSLNNRIQK 1620
Query: 225 FDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGC 284
F G +TS+G G+ +G+ + PRG+ VD + ++ V D NNRIQ F G F+ +G
Sbjct: 1621 FSSTGTFLTSWGLRGTGDGEFEEPRGIVVDAESHVYVTDHYNNRIQKFDSSGTFITTWGS 1680
Query: 285 WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GD EF +GVAV GN+ V D NHRIQ F
Sbjct: 1681 EPPGDSEFSYPKGVAVDDAGNVYVADTNNHRIQKF 1715
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 149/294 (50%), Gaps = 25/294 (8%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGI 103
K GS GS G F+ PRGI V + V+D N+R+Q T VF +
Sbjct: 1487 KWGSYGSGDGEFSDPRGITVDSAGYLYVSDYWNNRIQKFDSSGTFITKFVFSQGSGDGQF 1546
Query: 104 AVGPDN-------SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
+GPD+ ++ V D N R+Q F + GTF+ +GS G GQ P IAV +
Sbjct: 1547 GLGPDSVAVDRAGNLYVTDPINSRIQKFDNSGTFIAAWGSYGAGIGQFRSPTGIAVDADS 1606
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
V V+DS N+R+Q F S GTF+ +G G G+ E P I V + V V+D
Sbjct: 1607 NVYVADSLNNRIQ-------KFSSTGTFLTSWGLRGTGDGEFEEPRGIVVDAESHVYVTD 1659
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
N+R+Q FD +G IT++GSE + + +P+GVAVDD G + V D+ N+RIQ F +G
Sbjct: 1660 HYNNRIQKFDSSGTFITTWGSEPPGDSEFSYPKGVAVDDAGNVYVADTNNHRIQKFDANG 1719
Query: 277 QFLRAFGCWGS-----------GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F+ +G S +G F +GVA+ G + V D N+RIQ F
Sbjct: 1720 TFITTWGHEESPSLPGELPVIEANGNFSFPKGVAIDGEGFVYVADSGNNRIQKF 1773
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 164/309 (53%), Gaps = 47/309 (15%)
Query: 45 IGSRGSEP---GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA----- 96
I + GSEP F++P+G+AV ++ VAD++NHR+Q FD N F+
Sbjct: 1675 ITTWGSEPPGDSEFSYPKGVAVDDAGNVYVADTNNHRIQ----KFDA--NGTFITTWGHE 1728
Query: 97 -----------------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG--SM 137
F++P+G+A+ + + VADS N+R+Q F ++GTF+ K+G +
Sbjct: 1729 ESPSLPGELPVIEANGNFSFPKGVAIDGEGFVYVADSGNNRIQKFDANGTFITKWGGWPV 1788
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNH---RVQIFDVNGRVFQSDGTFVGKFGSMGNK 194
G GQ IAV + V+D+ + R+Q FD S+GTF+ K+GS G
Sbjct: 1789 GYGDGQFSGLRGIAVDEDGFIYVADAEEYVIARIQKFD-------SNGTFITKWGSYGTG 1841
Query: 195 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
AG+ P +A V V+D R+Q FD++G I ++ S+ GQL P +A D
Sbjct: 1842 AGEFMDPQGVATDPFGNVYVTDGYGGRIQKFDISGTFIATWVSDDKGVGQLLSPSCIATD 1901
Query: 255 DQG--YISVGD--SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
D G Y++ D + ++ I+ FT +G F+ +G GSGDGEF GL GVAV +G + D
Sbjct: 1902 DAGNVYVTSFDLYTASSDIRKFTGNGIFITTWGVSGSGDGEFSGLLGVAVNGDGLVYAAD 1961
Query: 311 RENHRIQVF 319
N+RIQVF
Sbjct: 1962 EYNNRIQVF 1970
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 146/333 (43%), Gaps = 67/333 (20%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
K G+ GS G F PRGIAV ++ VADS NHR+Q+ FD TN FL
Sbjct: 1203 KWGTAGSGDGQFNVPRGIAVDSRGNVFVADSLNHRIQI----FD--TNGTFLTEFGSYGT 1256
Query: 97 ----FTWPRGIAVGPDNSIVVADSSNHRVQVFQS--DGTFVGKFGSMGNKA--------- 141
F P V ++ V D+ NHR+Q+F+ +G F ++
Sbjct: 1257 GEGEFNEPWDTLVDNAGNVYVTDARNHRIQIFEPIPEGMPFTSFTALPTAGTAPLTVTFT 1316
Query: 142 ----------------GQLEH----------PHYIAVSNTNRVIVSDSNNHRVQIFDVNG 175
G + H P + VS T V N + V+
Sbjct: 1317 DESTGEPTEWQWTFGDGTISHEQNPKKTYMIPGFYTVSLTATNAVGSDTNTKNDYITVS- 1375
Query: 176 RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSF 235
D FV K+GS G+ G+L P I V V V+DSNN R+Q FD NG T +
Sbjct: 1376 -PLAEDYEFVMKWGSYGD--GRLLGPMGIGVDAAGNVCVADSNNLRIQKFDRNGTFSTKW 1432
Query: 236 GSEGSEEGQL---------KFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
GS GS +G+ P GV +D G + V D NNRIQ F +G F+ +G +G
Sbjct: 1433 GSPGSGDGEFGCDYDSYSENGPHGVVMDAAGNVYVADLYNNRIQKFDANGTFITKWGSYG 1492
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
SGDGEF G+ V S G + V D N+RIQ F
Sbjct: 1493 SGDGEFSDPRGITVDSAGYLYVSDYWNNRIQKF 1525
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
N R I+ +GS G+ +G+ +P G+ D G I V D GN+RIQ F G F+ +G G
Sbjct: 1007 ANFRFISEWGSRGTADGEFTYPDGIVRDTAGNIYVVDYGNDRIQKFNRTGSFITKWGSSG 1066
Query: 287 -SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
S DGEF G+AV S+ N+ V D N RIQ F
Sbjct: 1067 YSEDGEFNMPHGIAVDSDSNVYVTDTWNSRIQKF 1100
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 23/144 (15%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW---- 99
K GS G+ G F P+G+A P ++ V D R+Q FD+ + F+A TW
Sbjct: 1834 KWGSYGTGAGEFMDPQGVATDPFGNVYVTDGYGGRIQ----KFDI--SGTFIA-TWVSDD 1886
Query: 100 --------PRGIAVGPDNSIVVAD----SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHP 147
P IA ++ V +++ ++ F +G F+ +G G+ G+
Sbjct: 1887 KGVGQLLSPSCIATDDAGNVYVTSFDLYTASSDIRKFTGNGIFITTWGVSGSGDGEFSGL 1946
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIF 171
+AV+ V +D N+R+Q+F
Sbjct: 1947 LGVAVNGDGLVYAADEYNNRIQVF 1970
>gi|390341274|ref|XP_003725419.1| PREDICTED: tripartite motif-containing protein 71-like
[Strongylocentrotus purpuratus]
Length = 778
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 159/282 (56%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-----CFPHFDLKTNCVFLAF 97
GS G G P GIAV P+ I+VAD SN+R+Q+ F H F
Sbjct: 504 MSFGSEGEGEGQLCRPWGIAVHPEGRIIVADRSNNRIQIFNADGSFSHKFGSPGTRNGQF 563
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+AV + +I++AD NHR QVF+ G F+ KFG G+K GQ +P +AV++ +
Sbjct: 564 DRPAGVAVNGEGNIIIADKDNHRCQVFKISGQFLFKFGEKGSKNGQFNYPWDVAVNSEGK 623
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q F+ DGTF+ KFG G + P ++ +N ++ +D
Sbjct: 624 ILVSDTRNHRIQQFN-------PDGTFINKFGFEGALWKHFDSPRGVSYNNDGHIVTTDF 676
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +GYI V DS N+RIQ+F P+G
Sbjct: 677 NNHRLVVIHSDFQSAQYLGSEGTNNGQFLRPQGVAVDQEGYIIVADSRNHRIQVFHPNGS 736
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG G+G G+ G+ V +G ILV D N+R+Q F
Sbjct: 737 FLCKFGMPGTGSGQLDRPSGICVSPDGVILVVDFGNNRVQAF 778
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 117/196 (59%), Gaps = 7/196 (3%)
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGT 183
F + G + FGS G GQL P IAV R+IV+D +N+R+QIF+ +DG+
Sbjct: 496 FTTIGPALMSFGSEGEGEGQLCRPWGIAVHPEGRIIVADRSNNRIQIFN-------ADGS 548
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
F KFGS G + GQ + P +AV+ +I++D +NHR Q+F ++G+ + FG +GS+ G
Sbjct: 549 FSHKFGSPGTRNGQFDRPAGVAVNGEGNIIIADKDNHRCQVFKISGQFLFKFGEKGSKNG 608
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
Q +P VAV+ +G I V D+ N+RIQ F PDG F+ FG G+ F GV+ ++
Sbjct: 609 QFNYPWDVAVNSEGKILVSDTRNHRIQQFNPDGTFINKFGFEGALWKHFDSPRGVSYNND 668
Query: 304 GNILVCDRENHRIQVF 319
G+I+ D NHR+ V
Sbjct: 669 GHIVTTDFNNHRLVVI 684
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 111/214 (51%), Gaps = 16/214 (7%)
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
GPD + A+ + Q +GT+ + M LE HY++V+ + I+
Sbjct: 440 GPDGILYPAEV------IDQQNGTYQASYRPM------LEGQHYLSVTIKGKNIMDSP-- 485
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
+ N R F + G + FGS G GQL P IAV R+IV+D +N+R+QIF
Sbjct: 486 --FVVTARNARKFTTIGPALMSFGSEGEGEGQLCRPWGIAVHPEGRIIVADRSNNRIQIF 543
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
+ +G FGS G+ GQ P GVAV+ +G I + D N+R Q+F GQFL FG
Sbjct: 544 NADGSFSHKFGSPGTRNGQFDRPAGVAVNGEGNIIIADKDNHRCQVFKISGQFLFKFGEK 603
Query: 286 GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GS +G+F VAV S G ILV D NHRIQ F
Sbjct: 604 GSKNGQFNYPWDVAVNSEGKILVSDTRNHRIQQF 637
>gi|425458112|ref|ZP_18837700.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9807]
gi|389800280|emb|CCI20342.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9807]
Length = 342
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 122/316 (38%), Positives = 172/316 (54%), Gaps = 32/316 (10%)
Query: 15 LLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADS 74
LL++ + +G + F GS G+ G F PRGIAVG +I VAD+
Sbjct: 21 LLKSFSLVTATAIGCISIATSATAASFSFAFGSEGTGNGQFMLPRGIAVGRSGNIYVADT 80
Query: 75 SNHRVQVCFPHFDLKTNCVFLA-----------FTWPRGIAVGPDNSIVVADSSNHRVQV 123
N+RVQV ++ VF + F P GIAV +I VAD+ N+RVQV
Sbjct: 81 DNNRVQV------FNSSGVFQSTFGSFGTGNGQFRSPYGIAVSRGGNIYVADTDNNRVQV 134
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGT 183
F S G F FG+ G GQ + P+ IAV + + + V+D+ N+RVQ+F+ S G
Sbjct: 135 FNSSGVFQSAFGTNGTGNGQFQGPYGIAVGSGDNIYVADTANNRVQVFN-------SSGV 187
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
F FGS P+ IAV + + V+D+ N+RVQ+F+ +G ++FGS G+ G
Sbjct: 188 FQFAFGS--------SSPYGIAVGSGGNIYVADTFNNRVQVFNSSGVFQSTFGSFGTGNG 239
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
Q P G+AVD G + V D+ N+R+Q+F P G F FG +G+G+GEF G+AV S
Sbjct: 240 QFNSPYGIAVDSSGNVYVTDTFNDRVQVFNPSGVFQSTFGSFGTGNGEFSSPYGIAVGSR 299
Query: 304 GNILVCDRENHRIQVF 319
GNI V D N+R+QVF
Sbjct: 300 GNIYVADTANNRVQVF 315
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
Q GS G+ G F P GIAV ++ V D+ N RVQV P ++
Sbjct: 227 FQSTFGSFGTGNGQFNSPYGIAVDSSGNVYVTDTFNDRVQVFNPSGVFQSTFGSFGTGNG 286
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
F+ P GIAVG +I VAD++N+RVQVF++
Sbjct: 287 EFSSPYGIAVGSRGNIYVADTANNRVQVFRT 317
>gi|449675325|ref|XP_002166147.2| PREDICTED: E3 ubiquitin-protein ligase TRIM71-like [Hydra
magnipapillata]
Length = 762
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 163/296 (55%), Gaps = 24/296 (8%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
YL+ G G++P P IA+ D + V+D N+RVQV F
Sbjct: 480 YLKIDNTYLNFGVLGNKPCEMNLPWAIAIHEDGRMFVSDHGNNRVQV------FNELGKF 533
Query: 95 LA-----------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
+ F P GIA+ + I V+D NHRVQ F +G F+GKFG G + GQ
Sbjct: 534 ITEFGSKGSKDGQFLGPTGIAIDQNGCIFVSDWENHRVQQFNQNGVFIGKFGLKGREKGQ 593
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
L HP +AV +IV+D +NHR+Q VF SDG + GS GN GQL+ P +
Sbjct: 594 LLHPAGLAVDKNGCIIVADRDNHRLQ-------VFASDGRPISTIGSYGNGCGQLDSPTH 646
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
+A+ + N IVSD+ N R+ +F+ +GR + FGS+GS+ G P GV VD +GYI +GD
Sbjct: 647 VAIMDDNIYIVSDAGNDRLVLFEESGRFNSFFGSKGSDPGFFNRPSGVVVDKEGYIILGD 706
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
N+RIQ+F P+ ++ FG G+ D +F+ G+A+ + G + + DR NHR+QVF
Sbjct: 707 LYNHRIQVFDPELKYYCHFGGEGNQDKQFRYPSGIALTNEGRVAIVDRYNHRVQVF 762
>gi|291242614|ref|XP_002741201.1| PREDICTED: tripartite motif-containing 3-like [Saccoglossus
kowalevskii]
Length = 768
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/290 (37%), Positives = 161/290 (55%), Gaps = 24/290 (8%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
+ G G G P G+ + I+VAD SN+R+Q+ K + F+
Sbjct: 492 MMMSFGMEGEALGQLCRPWGVCTSKEGHIIVADRSNNRIQI------FKRDGTFVHKFGS 545
Query: 96 ------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
F P G++V N I+VAD NHR+Q+F +G F+ KFG G + GQ +P
Sbjct: 546 AGSRNGQFDRPAGVSVDGQNRIIVADKDNHRIQIFTLEGQFLLKFGEKGVRNGQFNYPWD 605
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
+AV++ R++VSD+ NHR+Q+F Q DGTF+ K+G G + P +A ++
Sbjct: 606 VAVNSDGRILVSDTRNHRIQLF-------QPDGTFLNKYGFEGALWKHFDSPRGVAFNHE 658
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
++V+D NNHR+ + + + GSEGS GQ P+GVA+D +G+I V DS N+R+
Sbjct: 659 GHMVVTDFNNHRLLVIHPDFQSARFLGSEGSGNGQFLRPQGVAIDPEGHIIVADSRNHRV 718
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
QIFTP+G FL FG G+ G+ G+ V +G+I+V D N+RIQVF
Sbjct: 719 QIFTPNGNFLCKFGIPGANPGQLDRPSGICVSPDGHIIVVDFGNNRIQVF 768
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 111/192 (57%), Gaps = 7/192 (3%)
Query: 128 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK 187
G + FG G GQL P + S +IV+D +N+R+QIF + DGTFV K
Sbjct: 490 GVMMMSFGMEGEALGQLCRPWGVCTSKEGHIIVADRSNNRIQIF-------KRDGTFVHK 542
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FGS G++ GQ + P ++V NR+IV+D +NHR+QIF + G+ + FG +G GQ +
Sbjct: 543 FGSAGSRNGQFDRPAGVSVDGQNRIIVADKDNHRIQIFTLEGQFLLKFGEKGVRNGQFNY 602
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P VAV+ G I V D+ N+RIQ+F PDG FL +G G+ F GVA G+++
Sbjct: 603 PWDVAVNSDGRILVSDTRNHRIQLFQPDGTFLNKYGFEGALWKHFDSPRGVAFNHEGHMV 662
Query: 308 VCDRENHRIQVF 319
V D NHR+ V
Sbjct: 663 VTDFNNHRLLVI 674
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 100/177 (56%), Gaps = 4/177 (2%)
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
Q+E H I+V+ + ++ N V+ +GR + + G + FG G GQL P
Sbjct: 455 QVEGQHIISVTIKGKHVIDSPFNIDVK----SGRNYSNIGVMMMSFGMEGEALGQLCRPW 510
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
+ S +IV+D +N+R+QIF +G + FGS GS GQ P GV+VD Q I V
Sbjct: 511 GVCTSKEGHIIVADRSNNRIQIFKRDGTFVHKFGSAGSRNGQFDRPAGVSVDGQNRIIVA 570
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D N+RIQIFT +GQFL FG G +G+F VAV S+G ILV D NHRIQ+F
Sbjct: 571 DKDNHRIQIFTLEGQFLLKFGEKGVRNGQFNYPWDVAVNSDGRILVSDTRNHRIQLF 627
>gi|260798200|ref|XP_002594088.1| hypothetical protein BRAFLDRAFT_118791 [Branchiostoma floridae]
gi|229279321|gb|EEN50099.1| hypothetical protein BRAFLDRAFT_118791 [Branchiostoma floridae]
Length = 603
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 157/285 (55%), Gaps = 12/285 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-----CFPHFDLKTNCVF 94
++ KIG G G P GI D + VVAD SN+R+QV F H
Sbjct: 326 QMLLKIGEEGEGDGQLCRPWGICCDKDGNYVVADRSNNRIQVFNHSGTFLHKFGSAGSRN 385
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F P G+AV I+VAD NHR+Q+F G F+ KFG G+K GQ +P +AVS+
Sbjct: 386 GQFDRPAGVAVDNQGRIIVADKDNHRIQIFTFHGDFMLKFGEKGSKNGQFNYPWDVAVSS 445
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+++VSD+ NHRVQ+F +DG+F K+G G + P +A + ++V
Sbjct: 446 EGKILVSDTRNHRVQLF-------HADGSFYNKYGFEGALWKHFDSPRGVAFNREGHMVV 498
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+D NNHR+ + + + GSEG+ GQ P+GVAVD +G+I V DS N+RIQ+FTP
Sbjct: 499 TDFNNHRLLVIHPDFQSARFLGSEGTGNGQFLRPQGVAVDQEGHIIVADSRNHRIQVFTP 558
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G FL FG G+G G G+ V +G I V D N+R+QVF
Sbjct: 559 NGNFLYKFGMPGTGPGCVDRPSGICVTPDGLIAVVDFGNNRVQVF 603
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGT 183
+ + G + K G G GQL P I +V+D +N+R+Q+F+ GT
Sbjct: 321 YSTVGQMLLKIGEEGEGDGQLCRPWGICCDKDGNYVVADRSNNRIQVFN-------HSGT 373
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
F+ KFGS G++ GQ + P +AV N R+IV+D +NHR+QIF +G + FG +GS+ G
Sbjct: 374 FLHKFGSAGSRNGQFDRPAGVAVDNQGRIIVADKDNHRIQIFTFHGDFMLKFGEKGSKNG 433
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
Q +P VAV +G I V D+ N+R+Q+F DG F +G G+ F GVA
Sbjct: 434 QFNYPWDVAVSSEGKILVSDTRNHRVQLFHADGSFYNKYGFEGALWKHFDSPRGVAFNRE 493
Query: 304 GNILVCDRENHRIQVF 319
G+++V D NHR+ V
Sbjct: 494 GHMVVTDFNNHRLLVI 509
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 100/181 (55%), Gaps = 4/181 (2%)
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
N GQ E H I+V+ + I + +VQ+ GR + + G + K G G GQL
Sbjct: 286 NYRGQTEGQHTISVTIRGKHI--QESPFKVQV--KTGRNYSTVGQMLLKIGEEGEGDGQL 341
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
P I +V+D +N+R+Q+F+ +G + FGS GS GQ P GVAVD+QG
Sbjct: 342 CRPWGICCDKDGNYVVADRSNNRIQVFNHSGTFLHKFGSAGSRNGQFDRPAGVAVDNQGR 401
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
I V D N+RIQIFT G F+ FG GS +G+F VAV S G ILV D NHR+Q+
Sbjct: 402 IIVADKDNHRIQIFTFHGDFMLKFGEKGSKNGQFNYPWDVAVSSEGKILVSDTRNHRVQL 461
Query: 319 F 319
F
Sbjct: 462 F 462
>gi|219853189|ref|YP_002467621.1| PKD domain-containing protein [Methanosphaerula palustris E1-9c]
gi|219547448|gb|ACL17898.1| PKD domain containing protein [Methanosphaerula palustris E1-9c]
Length = 930
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 153/287 (53%), Gaps = 24/287 (8%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
K GS GS G F P GIAV + V DS N RVQ + F+
Sbjct: 175 KWGSDGSGDGLFENPGGIAVDSAGDVYVTDSWNPRVQ------KFNSTGTFITRWGSEGS 228
Query: 97 ----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
F GIAV ++ V D HRVQ F S G F+ K+G G+ GQL +P IA+
Sbjct: 229 GDGQFGTSYGIAVDSAGNVYVVDIGTHRVQEFTSTGEFITKWGGYGSGDGQLSYPRGIAL 288
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
+ V V D+ N+RVQ F S GTF+ K+G G+ AG+L HPH +A+ + V
Sbjct: 289 DSAGNVYVVDTGNNRVQ-------KFTSTGTFITKWGGEGSGAGELNHPHGVALDDAGNV 341
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+ D+ N+RVQIF G I +GS+GSE+GQ +P +AVD G + V D+GNNR+Q F
Sbjct: 342 YIIDTWNNRVQIFTSTGEFIAKWGSKGSEDGQFIYPYSIAVDSAGNVYVVDTGNNRVQKF 401
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
T G F+ +G G GDG+F G+ S GN+ V D EN R+Q F
Sbjct: 402 TSTGTFITQWGGEGFGDGQFNFPGGITADSAGNVYVVDTENDRVQKF 448
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 153/287 (53%), Gaps = 24/287 (8%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
K G GS G F++P GIA ++ V D+ NHR+Q FD F+
Sbjct: 128 KWGGEGSGDGQFSYPYGIAADRAGNVYVTDTWNHRIQ----KFDAT--GAFITKWGSDGS 181
Query: 97 ----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
F P GIAV + V DS N RVQ F S GTF+ ++GS G+ GQ + IAV
Sbjct: 182 GDGLFENPGGIAVDSAGDVYVTDSWNPRVQKFNSTGTFITRWGSEGSGDGQFGTSYGIAV 241
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
+ V V D HRVQ F S G F+ K+G G+ GQL +P IA+ + V
Sbjct: 242 DSAGNVYVVDIGTHRVQ-------EFTSTGEFITKWGGYGSGDGQLSYPRGIALDSAGNV 294
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V D+ N+RVQ F G IT +G EGS G+L P GVA+DD G + + D+ NNR+QIF
Sbjct: 295 YVVDTGNNRVQKFTSTGTFITKWGGEGSGAGELNHPHGVALDDAGNVYIIDTWNNRVQIF 354
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
T G+F+ +G GS DG+F +AV S GN+ V D N+R+Q F
Sbjct: 355 TSTGEFIAKWGSKGSEDGQFIYPYSIAVDSAGNVYVVDTGNNRVQKF 401
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 159/305 (52%), Gaps = 26/305 (8%)
Query: 27 VGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHF 86
+GT ++ K G GS G ++PRGIA+ ++ V D+ N+RVQ
Sbjct: 252 IGTHRVQEFTSTGEFITKWGGYGSGDGQLSYPRGIALDSAGNVYVVDTGNNRVQ------ 305
Query: 87 DLKTNCVFLAFTW------------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKF 134
+ F+ W P G+A+ ++ + D+ N+RVQ+F S G F+ K+
Sbjct: 306 KFTSTGTFIT-KWGGEGSGAGELNHPHGVALDDAGNVYIIDTWNNRVQIFTSTGEFIAKW 364
Query: 135 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK 194
GS G++ GQ +P+ IAV + V V D+ N+RVQ F S GTF+ ++G G
Sbjct: 365 GSKGSEDGQFIYPYSIAVDSAGNVYVVDTGNNRVQ-------KFTSTGTFITQWGGEGFG 417
Query: 195 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
GQ P I + V V D+ N RVQ F G IT +G +GS G+ +P G+AVD
Sbjct: 418 DGQFNFPGGITADSAGNVYVVDTENDRVQKFTSTGEFITKWGGDGSGVGEFNYPYGIAVD 477
Query: 255 DQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
G + V D+GNNR+QIFT G F+ +G GS DG+F G+AV S GN+ V D N+
Sbjct: 478 RAGNVYVVDTGNNRVQIFTSTGTFIAQWGGSGSRDGQFNYPGGIAVDSAGNVYVVDESNN 537
Query: 315 RIQVF 319
R Q F
Sbjct: 538 RFQKF 542
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/281 (39%), Positives = 153/281 (54%), Gaps = 12/281 (4%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FT 98
+ G+ G G F+ P G+AV ++ VAD ++R+ + T F
Sbjct: 34 QWGNGGLGYGRFSDPEGVAVDGTGAVFVADRLSNRILKFTSTGEFITQWGSEGSGNGQFE 93
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P GIAV +I V D+ NHRVQ F S G F+ K+G G+ GQ +P+ IA V
Sbjct: 94 NPGGIAVDSAGNIYVTDTWNHRVQKFTSTGEFITKWGGEGSGDGQFSYPYGIAADRAGNV 153
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
V+D+ NHR+Q FD G F+ K+GS G+ G E+P IAV + V V+DS
Sbjct: 154 YVTDTWNHRIQKFDATG-------AFITKWGSDGSGDGLFENPGGIAVDSAGDVYVTDSW 206
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
N RVQ F+ G IT +GSEGS +GQ G+AVD G + V D G +R+Q FT G+F
Sbjct: 207 NPRVQKFNSTGTFITRWGSEGSGDGQFGTSYGIAVDSAGNVYVVDIGTHRVQEFTSTGEF 266
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ +G +GSGDG+ G+A+ S GN+ V D N+R+Q F
Sbjct: 267 ITKWGGYGSGDGQLSYPRGIALDSAGNVYVVDTGNNRVQKF 307
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 129/247 (52%), Gaps = 24/247 (9%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
K GS+GSE G F +P IAV ++ V D+ N+RVQ + F+
Sbjct: 363 KWGSKGSEDGQFIYPYSIAVDSAGNVYVVDTGNNRVQ------KFTSTGTFITQWGGEGF 416
Query: 97 ----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
F +P GI ++ V D+ N RVQ F S G F+ K+G G+ G+ +P+ IAV
Sbjct: 417 GDGQFNFPGGITADSAGNVYVVDTENDRVQKFTSTGEFITKWGGDGSGVGEFNYPYGIAV 476
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
V V D+ N+RVQIF S GTF+ ++G G++ GQ +P IAV + V
Sbjct: 477 DRAGNVYVVDTGNNRVQIF-------TSTGTFIAQWGGSGSRDGQFNYPGGIAVDSAGNV 529
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V D +N+R Q F G IT +GSEG +G+ +PR VAVD G + + D N+RIQ F
Sbjct: 530 YVVDESNNRFQKFTSTGEFITKWGSEGLGDGEFTYPRDVAVDSGGNVYIVDESNSRIQKF 589
Query: 273 TPDGQFL 279
+ Q +
Sbjct: 590 SWVAQIM 596
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 114/201 (56%), Gaps = 9/201 (4%)
Query: 121 VQVFQSDG--TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVF 178
VQV ++G T+ ++G+ G G+ P +AV T V V+D ++R+ F
Sbjct: 20 VQVVSAEGGYTYTAQWGNGGLGYGRFSDPEGVAVDGTGAVFVADRLSNRI-------LKF 72
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSE 238
S G F+ ++GS G+ GQ E+P IAV + + V+D+ NHRVQ F G IT +G E
Sbjct: 73 TSTGEFITQWGSEGSGNGQFENPGGIAVDSAGNIYVTDTWNHRVQKFTSTGEFITKWGGE 132
Query: 239 GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGV 298
GS +GQ +P G+A D G + V D+ N+RIQ F G F+ +G GSGDG F+ G+
Sbjct: 133 GSGDGQFSYPYGIAADRAGNVYVTDTWNHRIQKFDATGAFITKWGSDGSGDGLFENPGGI 192
Query: 299 AVMSNGNILVCDRENHRIQVF 319
AV S G++ V D N R+Q F
Sbjct: 193 AVDSAGDVYVTDSWNPRVQKF 213
>gi|170035308|ref|XP_001845512.1| tripartite motif protein trim2,3 [Culex quinquefasciatus]
gi|167877253|gb|EDS40636.1| tripartite motif protein trim2,3 [Culex quinquefasciatus]
Length = 1328
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/283 (42%), Positives = 144/283 (50%), Gaps = 86/283 (30%)
Query: 18 TLLVSGI-GQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSN 76
T V GI G G +PR+QYLQKRR F+IG RGSEPG
Sbjct: 938 TAAVVGIPGAAGMSPRTQYLQKRRQLFQIGGRGSEPG----------------------- 974
Query: 77 HRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS 136
+FTWPRGIAVGPDNSIVVADSSNHRVQVF S+G FV +FG
Sbjct: 975 -------------------SFTWPRGIAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGQ 1015
Query: 137 MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR-------------------- 176
GN G+ + +AV+ + I++D NHR+Q+ D GR
Sbjct: 1016 YGNGDGEFDCLAGVAVNRIGQFIIADRYNHRIQVLDPAGRFLRSFGSQGTADGKFNYPWG 1075
Query: 177 --------------------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
VFQSDG+F+GKFGS G GQLEHPHYIAVSNTNRVIVSD
Sbjct: 1076 ITTDALGFIYVCDKENHRIQVFQSDGSFIGKFGSCGKDEGQLEHPHYIAVSNTNRVIVSD 1135
Query: 217 SNNHRVQ--IFDVNGRVITSFGSEGSE-EGQLKFPRGVAVDDQ 256
SNNHR+Q D T G +G+E G + R + +D Q
Sbjct: 1136 SNNHRIQSAWADPTNEFYTLCGGKGNELNGNVSVFRSLDLDGQ 1178
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 112/198 (56%), Gaps = 15/198 (7%)
Query: 120 RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ 179
R Q+FQ G G++ G P IAV N ++V+DS+NHRVQ+FD NG
Sbjct: 960 RRQLFQ--------IGGRGSEPGSFTWPRGIAVGPDNSIVVADSSNHRVQVFDSNG---- 1007
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
FV +FG GN G+ + +AV+ + I++D NHR+Q+ D GR + SFGS+G
Sbjct: 1008 ---IFVKEFGQYGNGDGEFDCLAGVAVNRIGQFIIADRYNHRIQVLDPAGRFLRSFGSQG 1064
Query: 240 SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVA 299
+ +G+ +P G+ D G+I V D N+RIQ+F DG F+ FG G +G+ + +A
Sbjct: 1065 TADGKFNYPWGITTDALGFIYVCDKENHRIQVFQSDGSFIGKFGSCGKDEGQLEHPHYIA 1124
Query: 300 VMSNGNILVCDRENHRIQ 317
V + ++V D NHRIQ
Sbjct: 1125 VSNTNRVIVSDSNNHRIQ 1142
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 87/153 (56%), Gaps = 8/153 (5%)
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
R Q ++FQ G G++ G P IAV N ++V+DS+NHRVQ+FD
Sbjct: 953 RTQYLQKRRQLFQ--------IGGRGSEPGSFTWPRGIAVGPDNSIVVADSSNHRVQVFD 1004
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
NG + FG G+ +G+ GVAV+ G + D N+RIQ+ P G+FLR+FG G
Sbjct: 1005 SNGIFVKEFGQYGNGDGEFDCLAGVAVNRIGQFIIADRYNHRIQVLDPAGRFLRSFGSQG 1064
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ DG+F G+ + G I VCD+ENHRIQVF
Sbjct: 1065 TADGKFNYPWGITTDALGFIYVCDKENHRIQVF 1097
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFP 248
V IFDVNGRV+T+FG EGS+EGQ KFP
Sbjct: 1298 VTIFDVNGRVLTTFGGEGSDEGQFKFP 1324
>gi|195998269|ref|XP_002109003.1| hypothetical protein TRIADDRAFT_20343 [Trichoplax adhaerens]
gi|190589779|gb|EDV29801.1| hypothetical protein TRIADDRAFT_20343 [Trichoplax adhaerens]
Length = 666
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 156/285 (54%), Gaps = 24/285 (8%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------- 95
G G + G P G+ V PD I+VAD SN+R+Q+ P + FL
Sbjct: 395 GGEGEDDGKLCRPWGVTVNPDGYIIVADRSNNRIQIFNP------DGTFLRKFGTPGQRN 448
Query: 96 -AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F P G+A +VVAD NHR+Q+F +G F KFG GNK GQ +P +AV++
Sbjct: 449 GQFDRPAGVATNGRGQVVVADKDNHRIQIFTFEGEFCLKFGEKGNKNGQFNYPWDVAVNS 508
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
++++VSD+ NHR+Q+F DG F+ K+G G + P +A +N + ++V
Sbjct: 509 KDQILVSDTRNHRIQLF-------SPDGLFLNKYGFEGALWKHFDSPRGVAFNNEDNIVV 561
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+D NNHR+ + + + + G+EGS GQ P+GV +D +G I V DS N+RIQ+F
Sbjct: 562 TDFNNHRLLVVNSDFKTARFLGTEGSNNGQFLRPQGVTIDPEGNIIVADSRNHRIQVFGS 621
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G FL FG G DG G+AV G I+V D N+R+Q+F
Sbjct: 622 NGNFLCKFGSNGINDGCLDRPSGIAVTPEGLIIVVDFGNNRLQIF 666
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 124/236 (52%), Gaps = 16/236 (6%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-------CFPHFDLKTNCVFLA 96
K G+ G G F P G+A +VVAD NHR+Q+ C F K N
Sbjct: 440 KFGTPGQRNGQFDRPAGVATNGRGQVVVADKDNHRIQIFTFEGEFCL-KFGEKGN-KNGQ 497
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F +P +AV + I+V+D+ NHR+Q+F DG F+ K+G G + P +A +N +
Sbjct: 498 FNYPWDVAVNSKDQILVSDTRNHRIQLFSPDGLFLNKYGFEGALWKHFDSPRGVAFNNED 557
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++V+D NNHR+ + + SD G+ G+ GQ P + + +IV+D
Sbjct: 558 NIVVTDFNNHRLLVVN-------SDFKTARFLGTEGSNNGQFLRPQGVTIDPEGNIIVAD 610
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
S NHR+Q+F NG + FGS G +G L P G+AV +G I V D GNNR+QIF
Sbjct: 611 SRNHRIQVFGSNGNFLCKFGSNGINDGCLDRPSGIAVTPEGLIIVVDFGNNRLQIF 666
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 110/191 (57%), Gaps = 7/191 (3%)
Query: 128 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK 187
G V FG G G+L P + V+ +IV+D +N+R+QIF+ DGTF+ K
Sbjct: 388 GAPVKVFGGEGEDDGKLCRPWGVTVNPDGYIIVADRSNNRIQIFN-------PDGTFLRK 440
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG+ G + GQ + P +A + +V+V+D +NHR+QIF G FG +G++ GQ +
Sbjct: 441 FGTPGQRNGQFDRPAGVATNGRGQVVVADKDNHRIQIFTFEGEFCLKFGEKGNKNGQFNY 500
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P VAV+ + I V D+ N+RIQ+F+PDG FL +G G+ F GVA + NI+
Sbjct: 501 PWDVAVNSKDQILVSDTRNHRIQLFSPDGLFLNKYGFEGALWKHFDSPRGVAFNNEDNIV 560
Query: 308 VCDRENHRIQV 318
V D NHR+ V
Sbjct: 561 VTDFNNHRLLV 571
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 114/214 (53%), Gaps = 16/214 (7%)
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
PD+++ A+ S+ Q +GT++ + M +E H ++V+ V + +N
Sbjct: 328 APDSTLYCANVSD------QENGTYLVSYRPM------VEGSHIVSVT----VRGTHISN 371
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
+ NGR + + G V FG G G+L P + V+ +IV+D +N+R+QIF
Sbjct: 372 SPYTVCVRNGRNYLNIGAPVKVFGGEGEDDGKLCRPWGVTVNPDGYIIVADRSNNRIQIF 431
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
+ +G + FG+ G GQ P GVA + +G + V D N+RIQIFT +G+F FG
Sbjct: 432 NPDGTFLRKFGTPGQRNGQFDRPAGVATNGRGQVVVADKDNHRIQIFTFEGEFCLKFGEK 491
Query: 286 GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ +G+F VAV S ILV D NHRIQ+F
Sbjct: 492 GNKNGQFNYPWDVAVNSKDQILVSDTRNHRIQLF 525
>gi|425936264|sp|F6QEU4.1|LIN41_XENTR RecName: Full=E3 ubiquitin-protein ligase TRIM71; AltName:
Full=Protein lin-41 homolog; AltName: Full=Tripartite
motif-containing protein 71
Length = 814
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 152/282 (53%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
G G G P G+ V + I+VAD SN+RVQ+ P L F
Sbjct: 540 LSFGGEGDHDGKLCRPWGVCVDREGYIIVADRSNNRVQIFKPCGTFHHKFGSLGSRPGQF 599
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHRVQ+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 600 DRPAGVACDNSRRIVVADKDNHRVQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 659
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHRVQ+F DGTF+ K+G G + P +A S ++V+D
Sbjct: 660 ILVSDTRNHRVQLFG-------PDGTFLNKYGFEGALWKHFDSPRGVAFSQDGYLVVTDF 712
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ I + + G+EG+ GQ P+GVAVD +G I V DS N+R+QIF P+G
Sbjct: 713 NNHRLLIIKPDCQSAHFLGTEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFEPNGS 772
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI F
Sbjct: 773 FLCKFGTQGSGFGQMDRPSGIAVTPDGTIVVVDFGNNRILAF 814
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 113/217 (52%), Gaps = 16/217 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT++ + QLE H I+V N+ I
Sbjct: 473 LVMGPDGNLFAAEVSD------QLNGTYLVSYRP------QLEGEHLISVMVCNQHI--- 517
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FG G+ G+L P + V +IV+D +N+RV
Sbjct: 518 -ENSPFKVNVKSGRCYLGIGLPTLSFGGEGDHDGKLCRPWGVCVDREGYIIVADRSNNRV 576
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
QIF G FGS GS GQ P GVA D+ I V D N+R+QIFT +GQFL F
Sbjct: 577 QIFKPCGTFHHKFGSLGSRPGQFDRPAGVACDNSRRIVVADKDNHRVQIFTFEGQFLLKF 636
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ +G+F VAV S G ILV D NHR+Q+F
Sbjct: 637 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRVQLF 673
>gi|301616912|ref|XP_002937892.1| PREDICTED: tripartite motif-containing protein 71-like [Xenopus
(Silurana) tropicalis]
Length = 831
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 152/282 (53%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
G G G P G+ V + I+VAD SN+RVQ+ P L F
Sbjct: 557 LSFGGEGDHDGKLCRPWGVCVDREGYIIVADRSNNRVQIFKPCGTFHHKFGSLGSRPGQF 616
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHRVQ+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 617 DRPAGVACDNSRRIVVADKDNHRVQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 676
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHRVQ+F DGTF+ K+G G + P +A S ++V+D
Sbjct: 677 ILVSDTRNHRVQLFG-------PDGTFLNKYGFEGALWKHFDSPRGVAFSQDGYLVVTDF 729
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ I + + G+EG+ GQ P+GVAVD +G I V DS N+R+QIF P+G
Sbjct: 730 NNHRLLIIKPDCQSAHFLGTEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFEPNGS 789
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI F
Sbjct: 790 FLCKFGTQGSGFGQMDRPSGIAVTPDGTIVVVDFGNNRILAF 831
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 113/217 (52%), Gaps = 16/217 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT++ + QLE H I+V N+ I
Sbjct: 490 LVMGPDGNLFAAEVSD------QLNGTYLVSYRP------QLEGEHLISVMVCNQHI--- 534
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FG G+ G+L P + V +IV+D +N+RV
Sbjct: 535 -ENSPFKVNVKSGRCYLGIGLPTLSFGGEGDHDGKLCRPWGVCVDREGYIIVADRSNNRV 593
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
QIF G FGS GS GQ P GVA D+ I V D N+R+QIFT +GQFL F
Sbjct: 594 QIFKPCGTFHHKFGSLGSRPGQFDRPAGVACDNSRRIVVADKDNHRVQIFTFEGQFLLKF 653
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ +G+F VAV S G ILV D NHR+Q+F
Sbjct: 654 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRVQLF 690
>gi|374849371|dbj|BAL52388.1| PKD domain protein [uncultured candidate division OP1 bacterium]
gi|374857216|dbj|BAL60069.1| hypothetical protein HGMM_OP4C705 [uncultured candidate division
OP1 bacterium]
Length = 635
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 160/325 (49%), Gaps = 55/325 (16%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ----------VCFPHFDLKTNCV 93
+ G GSEPG F P+GIAV SI VAD+ NHR+Q P F C+
Sbjct: 307 QFGQDGSEPGAFRRPQGIAVDSKGSIYVADTENHRIQRFDPDTFKLTEKKPSFVWGGQCL 366
Query: 94 FLA-------------------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKF 134
F P IAV ++ V DS NHR+Q F S G F+GK+
Sbjct: 367 LRTGAGCSDPDGGGPLVPGDGQFNGPTDIAVDAAGNVYVVDSGNHRIQKFDSTGKFLGKW 426
Query: 135 GSMGNKAGQLEHPHYIAVSNTNRVI-VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
G+ G+ GQ E P IA+ + + I V+D NHR+Q FD++G + FVGK+GS N
Sbjct: 427 GTRGSGDGQFETPIGIALDGSGKFIYVADKGNHRIQKFDISGPTVR----FVGKWGSECN 482
Query: 194 KA---------------------GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
GQ P IAV V VSD+ NHR+Q FD NG+ +
Sbjct: 483 LTVTPPTGRCIDPDGGGPLQTGDGQFFEPQAIAVDGAGNVYVSDTGNHRIQKFDANGKFL 542
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
+G G +GQ PRG+A QG + V D NNR+Q F DG F+R +G G+G+GE
Sbjct: 543 LKWGRNGLAQGQFDVPRGLAFTKQGILLVVDQNNNRVQEFNADGTFVRQWGEQGNGEGEL 602
Query: 293 KGLEGVAVMSNGNILVCDRENHRIQ 317
+ +AV S GNI + + N+R+Q
Sbjct: 603 NAPQDIAVDSAGNIYIVELLNNRVQ 627
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 109/232 (46%), Gaps = 42/232 (18%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG-RVFQSDGTFV--- 185
F+ +FG G++ G P IAV + + V+D+ NHR+Q FD + ++ + +FV
Sbjct: 304 FLDQFGQDGSEPGAFRRPQGIAVDSKGSIYVADTENHRIQRFDPDTFKLTEKKPSFVWGG 363
Query: 186 -------------GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
G + GQ P IAV V V DS NHR+Q FD G+ +
Sbjct: 364 QCLLRTGAGCSDPDGGGPLVPGDGQFNGPTDIAVDAAGNVYVVDSGNHRIQKFDSTGKFL 423
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQG-YISVGDSGNNRIQIFTPDGQFLRAFGCWGS---- 287
+G+ GS +GQ + P G+A+D G +I V D GN+RIQ F G +R G WGS
Sbjct: 424 GKWGTRGSGDGQFETPIGIALDGSGKFIYVADKGNHRIQKFDISGPTVRFVGKWGSECNL 483
Query: 288 --------------------GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GDG+F + +AV GN+ V D NHRIQ F
Sbjct: 484 TVTPPTGRCIDPDGGGPLQTGDGQFFEPQAIAVDGAGNVYVSDTGNHRIQKF 535
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 106/221 (47%), Gaps = 40/221 (18%)
Query: 137 MGNKAGQLEHPHYIAVSNTNRVIVS----DSNNHRVQ--------IFD-VNGRVFQSDGT 183
G K GQL I+ ++ R+I+ D +R + F+ + GR
Sbjct: 246 FGEKEGQLSF--TISCNSAQRIILKVVLVDRQGNRSEQSVLRQRSTFEFIAGRKVADGLF 303
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN--------------G 229
F+ +FG G++ G P IAV + + V+D+ NHR+Q FD + G
Sbjct: 304 FLDQFGQDGSEPGAFRRPQGIAVDSKGSIYVADTENHRIQRFDPDTFKLTEKKPSFVWGG 363
Query: 230 RVITSFGSEGSE----------EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
+ + G+ S+ +GQ P +AVD G + V DSGN+RIQ F G+FL
Sbjct: 364 QCLLRTGAGCSDPDGGGPLVPGDGQFNGPTDIAVDAAGNVYVVDSGNHRIQKFDSTGKFL 423
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGN-ILVCDRENHRIQVF 319
+G GSGDG+F+ G+A+ +G I V D+ NHRIQ F
Sbjct: 424 GKWGTRGSGDGQFETPIGIALDGSGKFIYVADKGNHRIQKF 464
>gi|148677357|gb|EDL09304.1| mCG117986, isoform CRA_a [Mus musculus]
Length = 668
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 155/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 394 LSFGSEGDGEGKLCRPWGVSVDKEGFIIVADRSNNRIQVFKPCGSFHHKFGTLGSRPGQF 453
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A I+VAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 454 DRPAGVACDASRRIIVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 513
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G+ + P +A +N ++V+D
Sbjct: 514 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGSLWKHFDSPRGVAFNNEGHLVVTDF 566
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEGS GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 567 NNHRLLVIHPDCQSARFLGSEGSGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFEANGS 626
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 627 FLCKFGAQGSGFGQMDRPSGIAVTPDGLIVVVDFGNNRILIF 668
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 120/203 (59%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V +IV+D +N+R+Q
Sbjct: 379 VVKSGRSYVGIGLPGLSFGSEGDGEGKLCRPWGVSVDKEGFIIVADRSNNRIQ------- 431
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G+F KFG++G++ GQ + P +A + R+IV+D +NHR+QIF G+ + FG
Sbjct: 432 VFKPCGSFHHKFGTLGSRPGQFDRPAGVACDASRRIIVADKDNHRIQIFTFEGQFLLKFG 491
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G GS F
Sbjct: 492 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGSLWKHFDSPR 551
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA + G+++V D NHR+ V
Sbjct: 552 GVAFNNEGHLVVTDFNNHRLLVI 574
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 115/217 (52%), Gaps = 16/217 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT++ + QLE H ++V+ N+ I
Sbjct: 327 VVLGPDGNLFGAEVSD------QQNGTYIVSYRP------QLEGEHLVSVTLYNQHI--- 371
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R+
Sbjct: 372 -ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDGEGKLCRPWGVSVDKEGFIIVADRSNNRI 430
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL F
Sbjct: 431 QVFKPCGSFHHKFGTLGSRPGQFDRPAGVACDASRRIIVADKDNHRIQIFTFEGQFLLKF 490
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 491 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 527
>gi|390440891|ref|ZP_10229086.1| conserved exported hypothetical protein [Microcystis sp. T1-4]
gi|389835800|emb|CCI33212.1| conserved exported hypothetical protein [Microcystis sp. T1-4]
Length = 340
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/325 (38%), Positives = 175/325 (53%), Gaps = 35/325 (10%)
Query: 6 EAKNINSCFLLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGP 65
E ++++ L LV+ +G + +F GS G+ G F P IAVG
Sbjct: 13 EKRSLSKALLKSFSLVTAT-AIGCISIATSATAADFKFAFGSSGAGDGQFNNPYSIAVGS 71
Query: 66 DNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----------FTWPRGIAVGPDNSIVVA 114
I VAD++N+R+QV FD +N FL+ F+ P G+AV +I VA
Sbjct: 72 GGKIYVADTANNRIQV----FD--SNGGFLSTFGSPGTGNGEFSSPVGVAVDGVGNIYVA 125
Query: 115 DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 174
D+ N RVQ+F S G F G G L P+ IAV + + V+D+ N RVQ+FD
Sbjct: 126 DTFNERVQIFNSSGVFQSTVG-----VGYLGFPYGIAVGSGGNIYVADTFNDRVQVFD-- 178
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
S+G F+ FG G L P IAV ++ ++ V+D++N+ VQ+FD +G ++++
Sbjct: 179 -----SNGGFLSTFG-----VGNLSLPQGIAVGSSGKIYVADTDNNLVQVFDSSGTLLST 228
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
FGS GS G+ P GVAVD G I V D+ NNR+Q+F G F AFG G+G+G+F
Sbjct: 229 FGSSGSGNGEFFSPGGVAVDGVGNIYVADTNNNRVQVFNSGGVFQYAFGSSGTGNGQFNT 288
Query: 295 LEGVAVMSNGNILVCDRENHRIQVF 319
G+AV GNI V D N+RIQVF
Sbjct: 289 PYGIAVGGGGNIYVADTFNNRIQVF 313
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-----CFPHFDLKTNCVFL 95
L GS GS G F P G+AV +I VAD++N+RVQV F + +
Sbjct: 225 LLSTFGSSGSGNGEFFSPGGVAVDGVGNIYVADTNNNRVQVFNSGGVFQYAFGSSGTGNG 284
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
F P GIAVG +I VAD+ N+R+QVF++
Sbjct: 285 QFNTPYGIAVGGGGNIYVADTFNNRIQVFKT 315
>gi|218675702|gb|AAI69200.2| tripartite motif-containing 71 [synthetic construct]
Length = 471
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 155/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 197 LSFGSEGDGEGKLCRPWGVSVDKEGFIIVADRSNNRIQVFKPCGSFHHKFGTLGSRPGQF 256
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A I+VAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 257 DRPAGVACDASRRIIVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 316
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G+ + P +A +N ++V+D
Sbjct: 317 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGSLWKHFDSPRGVAFNNEGHLVVTDF 369
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEGS GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 370 NNHRLLVIHPDCQSARFLGSEGSGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFEANGS 429
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 430 FLCKFGAQGSGFGQMDRPSGIAVTPDGLIVVVDFGNNRILIF 471
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 115/217 (52%), Gaps = 16/217 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT++ + QLE H ++V+ N+ I
Sbjct: 130 VVLGPDGNLFGAEVSD------QQNGTYIVSYRP------QLEGEHLVSVTLYNQHI--- 174
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R+
Sbjct: 175 -ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDGEGKLCRPWGVSVDKEGFIIVADRSNNRI 233
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL F
Sbjct: 234 QVFKPCGSFHHKFGTLGSRPGQFDRPAGVACDASRRIIVADKDNHRIQIFTFEGQFLLKF 293
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 294 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 330
>gi|397781307|ref|YP_006545780.1| Tripartite motif-containing protein 71 [Methanoculleus bourgensis
MS2]
gi|396939809|emb|CCJ37064.1| Tripartite motif-containing protein 71 AltName: Full=Lin-41 homolog
[Methanoculleus bourgensis MS2]
Length = 1996
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 149/283 (52%), Gaps = 20/283 (7%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV---------FLA 96
GS+GS G P IA+ +I VAD+ N+RVQ FD N + +
Sbjct: 1530 GSKGSSDGQLNNPSDIAIDTAGNIYVADTYNNRVQ----KFDKSGNFMRRWESWHTGEIK 1585
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F +P GIA I VAD NHRVQ F S G + +GS G+ GQ + IA +
Sbjct: 1586 FLYPAGIATDTVGDIYVADYYNHRVQKFDSSGALISMWGSYGSGNGQFDRLTGIATDISG 1645
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
V VSD NHR+Q FD S G F+ +G+ G GQ + P IAV + V+D
Sbjct: 1646 NVYVSDYYNHRIQKFD-------STGAFLTTWGAYGTGNGQFDKPWGIAVDTAGDIYVAD 1698
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
NNHR+Q FD G IT++GSEGS GQ P +AVD GYI V D NNR+Q F G
Sbjct: 1699 YNNHRIQKFDSAGTFITAWGSEGSGSGQFNGPICIAVDAAGYIYVSDDYNNRVQKFDSAG 1758
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F+ A+G G+ G+F L G+AV S G++ V D N RIQ F
Sbjct: 1759 TFITAWGSEGTDSGQFSSLVGIAVDSAGHVFVVDHLNCRIQKF 1801
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 146/276 (52%), Gaps = 14/276 (5%)
Query: 50 SEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW------PRGI 103
S+ F++P GIA ++ VAD SNH ++V D F W P GI
Sbjct: 1299 SDVESFSYPTGIATDATGNVYVADYSNHCIRVFNSTGDYVATWGSYGF-WNGQFDRPTGI 1357
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 163
A ++ V+D NHR+Q F S G F+ +G+ G GQ + P IAV + V+D
Sbjct: 1358 ATDISGNVYVSDYYNHRIQKFDSTGAFLTTWGAYGTGNGQFDKPWGIAVDAAGDIYVADY 1417
Query: 164 NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
NNHR+Q FD S GTFV +GS G+ +GQ P IAV + VSD N+RVQ
Sbjct: 1418 NNHRIQKFD-------SAGTFVTAWGSKGSGSGQFNGPICIAVDAAGYIYVSDDYNNRVQ 1470
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
FD G IT++GSEG++ GQ G+AVD G++ V D N RIQ F G F+ +G
Sbjct: 1471 KFDSAGTFITAWGSEGTDSGQFSSLVGIAVDSAGHVFVVDHLNCRIQKFDSSGTFISTWG 1530
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GS DG+ +A+ + GNI V D N+R+Q F
Sbjct: 1531 SKGSSDGQLNNPSDIAIDTAGNIYVADTYNNRVQKF 1566
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 143/274 (52%), Gaps = 20/274 (7%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------AFTWPRGIAV 105
F +P GIA I VAD NHRVQ FD + + F GIA
Sbjct: 1586 FLYPAGIATDTVGDIYVADYYNHRVQ----KFDSSGALISMWGSYGSGNGQFDRLTGIAT 1641
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
++ V+D NHR+Q F S G F+ +G+ G GQ + P IAV + V+D NN
Sbjct: 1642 DISGNVYVSDYYNHRIQKFDSTGAFLTTWGAYGTGNGQFDKPWGIAVDTAGDIYVADYNN 1701
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
HR+Q FD S GTF+ +GS G+ +GQ P IAV + VSD N+RVQ F
Sbjct: 1702 HRIQKFD-------SAGTFITAWGSEGSGSGQFNGPICIAVDAAGYIYVSDDYNNRVQKF 1754
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
D G IT++GSEG++ GQ G+AVD G++ V D N RIQ F G F+ +G
Sbjct: 1755 DSAGTFITAWGSEGTDSGQFSSLVGIAVDSAGHVFVVDHLNCRIQKFDSSGTFISTWGSE 1814
Query: 286 GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G DG+F G+A+ S GN+ V D ++RIQ F
Sbjct: 1815 GFSDGQFYRPSGIALDSAGNVYVADTYSNRIQKF 1848
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 157/326 (48%), Gaps = 59/326 (18%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW------ 99
GS G G F P GIA ++ V+D NHR+Q FD + FL TW
Sbjct: 1342 GSYGFWNGQFDRPTGIATDISGNVYVSDYYNHRIQ----KFD--STGAFLT-TWGAYGTG 1394
Query: 100 ------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
P GIAV I VAD +NHR+Q F S GTFV +GS G+ +GQ P IAV
Sbjct: 1395 NGQFDKPWGIAVDAAGDIYVADYNNHRIQKFDSAGTFVTAWGSKGSGSGQFNGPICIAVD 1454
Query: 154 NTNRVIVSDSNNHRVQIFD--------------------------------------VNG 175
+ VSD N+RVQ FD +N
Sbjct: 1455 AAGYIYVSDDYNNRVQKFDSAGTFITAWGSEGTDSGQFSSLVGIAVDSAGHVFVVDHLNC 1514
Query: 176 RV--FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT 233
R+ F S GTF+ +GS G+ GQL +P IA+ + V+D+ N+RVQ FD +G +
Sbjct: 1515 RIQKFDSSGTFISTWGSKGSSDGQLNNPSDIAIDTAGNIYVADTYNNRVQKFDKSGNFMR 1574
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+ S + E + +P G+A D G I V D N+R+Q F G + +G +GSG+G+F
Sbjct: 1575 RWESWHTGEIKFLYPAGIATDTVGDIYVADYYNHRVQKFDSSGALISMWGSYGSGNGQFD 1634
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
L G+A +GN+ V D NHRIQ F
Sbjct: 1635 RLTGIATDISGNVYVSDYYNHRIQKF 1660
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/241 (40%), Positives = 127/241 (52%), Gaps = 26/241 (10%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW------ 99
GS GS G F GIA ++ V+D NHR+Q FD + FL TW
Sbjct: 1624 GSYGSGNGQFDRLTGIATDISGNVYVSDYYNHRIQ----KFD--STGAFLT-TWGAYGTG 1676
Query: 100 ------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
P GIAV I VAD +NHR+Q F S GTF+ +GS G+ +GQ P IAV
Sbjct: 1677 NGQFDKPWGIAVDTAGDIYVADYNNHRIQKFDSAGTFITAWGSEGSGSGQFNGPICIAVD 1736
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+ VSD N+RVQ FD S GTF+ +GS G +GQ IAV + V
Sbjct: 1737 AAGYIYVSDDYNNRVQKFD-------SAGTFITAWGSEGTDSGQFSSLVGIAVDSAGHVF 1789
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
V D N R+Q FD +G I+++GSEG +GQ P G+A+D G + V D+ +NRIQ F+
Sbjct: 1790 VVDHLNCRIQKFDSSGTFISTWGSEGFSDGQFYRPSGIALDSAGNVYVADTYSNRIQKFS 1849
Query: 274 P 274
P
Sbjct: 1850 P 1850
>gi|109948300|ref|NP_001035968.1| E3 ubiquitin-protein ligase TRIM71 [Mus musculus]
gi|123778901|sp|Q1PSW8.1|LIN41_MOUSE RecName: Full=E3 ubiquitin-protein ligase TRIM71; AltName:
Full=Protein lin-41 homolog; Short=mLin41; AltName:
Full=Tripartite motif-containing protein 71
gi|66774314|gb|AAY55947.1| LIN41 [Mus musculus]
Length = 855
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 155/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 581 LSFGSEGDGEGKLCRPWGVSVDKEGFIIVADRSNNRIQVFKPCGSFHHKFGTLGSRPGQF 640
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A I+VAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 641 DRPAGVACDASRRIIVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 700
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G+ + P +A +N ++V+D
Sbjct: 701 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGSLWKHFDSPRGVAFNNEGHLVVTDF 753
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEGS GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 754 NNHRLLVIHPDCQSARFLGSEGSGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFEANGS 813
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 814 FLCKFGAQGSGFGQMDRPSGIAVTPDGLIVVVDFGNNRILIF 855
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 120/203 (59%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V +IV+D +N+R+Q
Sbjct: 566 VVKSGRSYVGIGLPGLSFGSEGDGEGKLCRPWGVSVDKEGFIIVADRSNNRIQ------- 618
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G+F KFG++G++ GQ + P +A + R+IV+D +NHR+QIF G+ + FG
Sbjct: 619 VFKPCGSFHHKFGTLGSRPGQFDRPAGVACDASRRIIVADKDNHRIQIFTFEGQFLLKFG 678
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G GS F
Sbjct: 679 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGSLWKHFDSPR 738
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA + G+++V D NHR+ V
Sbjct: 739 GVAFNNEGHLVVTDFNNHRLLVI 761
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 115/217 (52%), Gaps = 16/217 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT++ + QLE H ++V+ N+ I
Sbjct: 514 VVLGPDGNLFGAEVSD------QQNGTYIVSYRP------QLEGEHLVSVTLYNQHI--- 558
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R+
Sbjct: 559 -ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDGEGKLCRPWGVSVDKEGFIIVADRSNNRI 617
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL F
Sbjct: 618 QVFKPCGSFHHKFGTLGSRPGQFDRPAGVACDASRRIIVADKDNHRIQIFTFEGQFLLKF 677
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 678 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 714
>gi|432108621|gb|ELK33324.1| Tripartite motif-containing protein 71 [Myotis davidii]
Length = 658
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 384 LSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQF 443
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+QVF +G F+ KFG G K GQ +P +AV++ +
Sbjct: 444 DRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 503
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 504 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 556
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 557 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 616
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 617 FLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF 658
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 119/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V ++V+D +N+R+Q
Sbjct: 369 VVKSGRSYVGIGIPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQ------- 421
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ GTF KFG++G++ GQ + P +A + R++V+D +NHR+Q+F G+ + FG
Sbjct: 422 VFKPCGTFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLKFG 481
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 482 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 541
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 542 GVAFNHEGHLVVTDFNNHRLLVI 564
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT++ + QLE H ++V+ N+ I
Sbjct: 316 AVVLGPDGNLFGAEVSD------QQNGTYLVSYRP------QLEGEHLVSVTLCNQHI-- 361
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R
Sbjct: 362 --ENSPFKVVVKSGRSYVGIGIPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNR 419
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQ+FT +GQFL
Sbjct: 420 IQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLK 479
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 480 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 517
>gi|391334887|ref|XP_003741830.1| PREDICTED: tripartite motif-containing protein 71-like [Metaseiulus
occidentalis]
Length = 800
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/281 (38%), Positives = 155/281 (55%), Gaps = 16/281 (5%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------FT 98
G G G P G+ V +VVAD SN+R+Q+ P D + F + F
Sbjct: 529 GGEGVREGDLCRPWGVCVDQAGRVVVADRSNNRIQIFNP--DGTFHMSFGSAGSQPGQFD 586
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P G+A+ I+VAD NHR+QVF S G F+ KFG G+K GQ +P +AV++ N +
Sbjct: 587 RPAGVAMDSTGRIIVADKDNHRIQVFSSRGEFILKFGERGSKIGQFNYPWDVAVNSDNNI 646
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+VSD+ NHRVQ+F DG F+ K+G G Q + P +A + ++V+D N
Sbjct: 647 LVSDTRNHRVQLF-------SPDGVFLNKYGFEGALWKQFDSPRGVAFDHQGNMVVTDFN 699
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
NHR+ + + G EG+ G+ P+GVAVD +G+I V DS N+R+Q+F PDG F
Sbjct: 700 NHRIVVIRNDFHSAQFLGYEGTGNGEFTRPQGVAVDSEGHIIVSDSRNHRVQVFRPDGTF 759
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L AFG G G+ GVA+ G ++V D NHR+Q+F
Sbjct: 760 LCAFGEPGVEPGQMDRPAGVAISPEGRVVVVDFGNHRVQIF 800
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 109/186 (58%), Gaps = 7/186 (3%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G + G L P + V RV+V+D +N+R+QIF+ DGTF FGS G+
Sbjct: 528 FGGEGVREGDLCRPWGVCVDQAGRVVVADRSNNRIQIFN-------PDGTFHMSFGSAGS 580
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
+ GQ + P +A+ +T R+IV+D +NHR+Q+F G I FG GS+ GQ +P VAV
Sbjct: 581 QPGQFDRPAGVAMDSTGRIIVADKDNHRIQVFSSRGEFILKFGERGSKIGQFNYPWDVAV 640
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
+ I V D+ N+R+Q+F+PDG FL +G G+ +F GVA GN++V D N
Sbjct: 641 NSDNNILVSDTRNHRVQLFSPDGVFLNKYGFEGALWKQFDSPRGVAFDHQGNMVVTDFNN 700
Query: 314 HRIQVF 319
HRI V
Sbjct: 701 HRIVVI 706
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 103/188 (54%), Gaps = 12/188 (6%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW--- 99
K G RGS+ G F +P +AV DN+I+V+D+ NHRVQ+ P F W
Sbjct: 620 LKFGERGSKIGQFNYPWDVAVNSDNNILVSDTRNHRVQLFSPDGVFLNKYGFEGALWKQF 679
Query: 100 --PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
PRG+A ++VV D +NHR+ V ++D G G G+ P +AV +
Sbjct: 680 DSPRGVAFDHQGNMVVTDFNNHRIVVIRNDFHSAQFLGYEGTGNGEFTRPQGVAVDSEGH 739
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
+IVSDS NHRVQ VF+ DGTF+ FG G + GQ++ P +A+S RV+V D
Sbjct: 740 IIVSDSRNHRVQ-------VFRPDGTFLCAFGEPGVEPGQMDRPAGVAISPEGRVVVVDF 792
Query: 218 NNHRVQIF 225
NHRVQIF
Sbjct: 793 GNHRVQIF 800
>gi|76665726|emb|CAJ32595.1| Lin41 protein [Gallus gallus]
Length = 566
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 152/282 (53%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 292 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQF 351
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV+ +
Sbjct: 352 DRPAGVACDVSRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAVNAEGK 411
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHRVQ+F DG F+ K+G G + P + ++ ++V+D
Sbjct: 412 ILVSDTRNHRVQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDF 464
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEGS GQ P+GVAVD +G I V DS N+R+QIF +G
Sbjct: 465 NNHRLLVIHADCQSARFLGSEGSGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGS 524
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI VF
Sbjct: 525 FLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF 566
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 114/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ AD S+ Q +GT++ + QLE H ++V N+ I
Sbjct: 224 AVVMGPDGNLFGADVSD------QQNGTYLVSYRP------QLEGEHLVSVMMCNQHI-- 269
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 270 --ENSPFKVVVKSGRSYIGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 327
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQF+
Sbjct: 328 IQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDVSRRIVVADKDNHRIQIFTFEGQFILK 387
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV + G ILV D NHR+Q+F
Sbjct: 388 FGEKGTKNGQFNYPWDVAVNAEGKILVSDTRNHRVQLF 425
>gi|326922023|ref|XP_003207251.1| PREDICTED: tripartite motif-containing protein 71-like [Meleagris
gallopavo]
Length = 566
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 153/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP----HFDLKT-NCVFLAF 97
GS G G P G++V + I+VAD SN+R+QV P H T F
Sbjct: 292 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSPAGQF 351
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV+ +
Sbjct: 352 DRPAGVACDVSRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAVNAEGK 411
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHRVQ+F DG F+ K+G G + P + ++ ++V+D
Sbjct: 412 ILVSDTRNHRVQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDF 464
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEGS GQ P+GVAVD +G I V DS N+R+QIF +G
Sbjct: 465 NNHRLLVIHADCQSARFLGSEGSGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGS 524
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI VF
Sbjct: 525 FLCKFGTQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF 566
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 114/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ AD S+ Q +GT++ + QLE H ++V N+ I
Sbjct: 224 AVVMGPDGNLFRADVSD------QQNGTYLVSYRP------QLEGEHLVSVMMCNQHI-- 269
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 270 --ENSPFKVVVKSGRSYIGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 327
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQF+
Sbjct: 328 IQVFKPCGTFHHKFGTLGSPAGQFDRPAGVACDVSRRIVVADKDNHRIQIFTFEGQFILK 387
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV + G ILV D NHR+Q+F
Sbjct: 388 FGEKGTKNGQFNYPWDVAVNAEGKILVSDTRNHRVQLF 425
>gi|71980108|gb|AAZ57335.1| LIN-41, partial [Gallus gallus]
Length = 724
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 152/282 (53%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 450 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQF 509
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV+ +
Sbjct: 510 DRPAGVACDVSRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAVNAEGK 569
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHRVQ+F DG F+ K+G G + P + ++ ++V+D
Sbjct: 570 ILVSDTRNHRVQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDF 622
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEGS GQ P+GVAVD +G I V DS N+R+QIF +G
Sbjct: 623 NNHRLLVIHADCQSARFLGSEGSGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGS 682
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI VF
Sbjct: 683 FLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF 724
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 114/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ AD S+ Q +GT++ + QLE H ++V N+ I
Sbjct: 382 AVVMGPDGNLFGADVSD------QQNGTYLVSYRP------QLEGEHLVSVMMCNQHI-- 427
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 428 --ENSPFKVVVKSGRSYIGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 485
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQF+
Sbjct: 486 IQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDVSRRIVVADKDNHRIQIFTFEGQFILK 545
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV + G ILV D NHR+Q+F
Sbjct: 546 FGEKGTKNGQFNYPWDVAVNAEGKILVSDTRNHRVQLF 583
>gi|242005785|ref|XP_002423741.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212506943|gb|EEB11003.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 465
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 161/286 (56%), Gaps = 23/286 (8%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL-----KTNCVFLA 96
+F IGS+G G F P G+ V I+VAD SN R+Q+ + KT
Sbjct: 195 KFIIGSKGQNDGEFCRPWGVCVNGIGQILVADRSNDRIQIFSESGEFMFNFGKTGFENGE 254
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F+ P GIA + I+VAD +NHRVQ+F +G F+ FG +GN+ G+ + P +A + +
Sbjct: 255 FSCPSGIATDRNLRIIVADKNNHRVQIFSPNGLFLDSFGKLGNEPGEFKFPWDVATNLDD 314
Query: 157 RVIVSDSNNHRVQIFDVNGR---VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+ VSD N R+Q+FD G+ +FQS L++P +A +++
Sbjct: 315 EIAVSDPFNSRIQLFDKFGKLLKIFQSKN---------------LKNPRGLAFYPDGKLL 359
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
V+D +NH++ + D N ++ F EG EEG+L P+G+AV D G +V D N RIQIF
Sbjct: 360 VTDFDNHKILLLDSNMNIVMKFSKEGHEEGELFRPQGIAVFDNGSFAVSDCKNYRIQIFN 419
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G+F ++FG GS GEF +G+A+ NGNI+V D N+R+Q+F
Sbjct: 420 RNGRFEKSFGSKGSSPGEFDCPQGIAIHKNGNIIVVDFGNNRLQIF 465
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 137/268 (51%), Gaps = 34/268 (12%)
Query: 21 VSGIGQVGTTPRSQ-----YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSS 75
V+GIGQ+ RS + + F G G E G F+ P GIA + I+VAD +
Sbjct: 216 VNGIGQILVADRSNDRIQIFSESGEFMFNFGKTGFENGEFSCPSGIATDRNLRIIVADKN 275
Query: 76 NHRVQVCFPHFDLKTNCVFL-----------AFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
NHRVQ+ P N +FL F +P +A D+ I V+D N R+Q+F
Sbjct: 276 NHRVQIFSP------NGLFLDSFGKLGNEPGEFKFPWDVATNLDDEIAVSDPFNSRIQLF 329
Query: 125 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTF 184
G + F S L++P +A +++V+D +NH++ + D N +
Sbjct: 330 DKFGKLLKIFQSKN-----LKNPRGLAFYPDGKLLVTDFDNHKILLLDSNMNI------- 377
Query: 185 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQ 244
V KF G++ G+L P IAV + VSD N+R+QIF+ NGR SFGS+GS G+
Sbjct: 378 VMKFSKEGHEEGELFRPQGIAVFDNGSFAVSDCKNYRIQIFNRNGRFEKSFGSKGSSPGE 437
Query: 245 LKFPRGVAVDDQGYISVGDSGNNRIQIF 272
P+G+A+ G I V D GNNR+QIF
Sbjct: 438 FDCPQGIAIHKNGNIIVVDFGNNRLQIF 465
>gi|242005797|ref|XP_002423747.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212506949|gb|EEB11009.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 455
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 161/286 (56%), Gaps = 23/286 (8%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL-----KTNCVFLA 96
+F IGS+G G F P G+ V I+VAD SN R+Q+ + KT
Sbjct: 185 KFIIGSKGQNDGEFCRPWGVCVNGIGQILVADRSNDRIQIFSESGEFMFNFGKTGFENGE 244
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F+ P GIA + I+VAD +NHRVQ+F +G F+ FG +GN+ G+ + P +A + +
Sbjct: 245 FSCPSGIATDRNLRIIVADKNNHRVQIFSPNGLFLDSFGKLGNEPGEFKFPWDVATNLDD 304
Query: 157 RVIVSDSNNHRVQIFDVNGR---VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+ VSD N R+Q+FD G+ +FQS L++P +A +++
Sbjct: 305 EIAVSDPFNSRIQLFDKFGKLLKIFQSKN---------------LKNPRGLAFYPDGKLL 349
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
V+D +NH++ + D N ++ F EG EEG+L P+G+AV D G +V D N RIQIF
Sbjct: 350 VTDFDNHKILLLDSNMNIVMKFSKEGHEEGELFRPQGIAVFDNGSFAVSDCKNYRIQIFN 409
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G+F ++FG GS GEF +G+A+ NGNI+V D N+R+Q+F
Sbjct: 410 RNGRFEKSFGSKGSSPGEFDCPQGIAIHKNGNIIVVDFGNNRLQIF 455
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 137/268 (51%), Gaps = 34/268 (12%)
Query: 21 VSGIGQVGTTPRSQ-----YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSS 75
V+GIGQ+ RS + + F G G E G F+ P GIA + I+VAD +
Sbjct: 206 VNGIGQILVADRSNDRIQIFSESGEFMFNFGKTGFENGEFSCPSGIATDRNLRIIVADKN 265
Query: 76 NHRVQVCFPHFDLKTNCVFL-----------AFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
NHRVQ+ P N +FL F +P +A D+ I V+D N R+Q+F
Sbjct: 266 NHRVQIFSP------NGLFLDSFGKLGNEPGEFKFPWDVATNLDDEIAVSDPFNSRIQLF 319
Query: 125 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTF 184
G + F S L++P +A +++V+D +NH++ + D N +
Sbjct: 320 DKFGKLLKIFQSKN-----LKNPRGLAFYPDGKLLVTDFDNHKILLLDSNMNI------- 367
Query: 185 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQ 244
V KF G++ G+L P IAV + VSD N+R+QIF+ NGR SFGS+GS G+
Sbjct: 368 VMKFSKEGHEEGELFRPQGIAVFDNGSFAVSDCKNYRIQIFNRNGRFEKSFGSKGSSPGE 427
Query: 245 LKFPRGVAVDDQGYISVGDSGNNRIQIF 272
P+G+A+ G I V D GNNR+QIF
Sbjct: 428 FDCPQGIAIHKNGNIIVVDFGNNRLQIF 455
>gi|431919433|gb|ELK17952.1| Tripartite motif-containing protein 71 [Pteropus alecto]
Length = 566
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 292 LSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQF 351
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 352 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 411
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 412 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 464
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 465 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 524
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 525 FLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF 566
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ ++ Q +GT+ M + QLE H ++V+ N+ I
Sbjct: 224 AVVLGPDGNLFGAEVTD------QQNGTY------MVSYRPQLEGEHLVSVTMCNQHI-- 269
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R
Sbjct: 270 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNR 327
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 328 IQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 387
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 388 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 425
>gi|351706295|gb|EHB09214.1| Tripartite motif-containing protein 71 [Heterocephalus glaber]
Length = 670
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 396 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGSFHHKFGTLGSRPGQF 455
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 456 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 515
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 516 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 568
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 569 NNHRLLVIHPDCQSARFLGSEGTANGQFLRPQGVAVDQEGRIIVADSRNHRVQMFEANGS 628
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+A+ +G I+V D N+RI +F
Sbjct: 629 FLCKFGAQGSGFGQMDRPSGIAITPDGMIVVVDFGNNRILIF 670
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 119/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V +IV+D +N+R+Q
Sbjct: 381 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQ------- 433
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G+F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 434 VFKPCGSFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFG 493
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 494 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 553
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 554 GVAFNHEGHLVVTDFNNHRLLVI 576
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ ++ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 328 AVVLGPDGNLFGAEVND------QQNGTYVVSYRP------QLEGEHLVSVTMCNQHI-- 373
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 374 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 431
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 432 IQVFKPCGSFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 491
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 492 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 529
>gi|167830408|ref|NP_001032352.2| E3 ubiquitin-protein ligase TRIM71 [Gallus gallus]
gi|123889648|sp|Q1PRL4.1|LIN41_CHICK RecName: Full=E3 ubiquitin-protein ligase TRIM71; AltName:
Full=Protein lin-41 homolog; AltName: Full=Tripartite
motif-containing protein 71
gi|82658780|gb|ABB88564.1| Lin-41 [Gallus gallus]
Length = 876
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 152/282 (53%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 602 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQF 661
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV+ +
Sbjct: 662 DRPAGVACDVSRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAVNAEGK 721
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHRVQ+F DG F+ K+G G + P + ++ ++V+D
Sbjct: 722 ILVSDTRNHRVQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDF 774
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEGS GQ P+GVAVD +G I V DS N+R+QIF +G
Sbjct: 775 NNHRLLVIHADCQSARFLGSEGSGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGS 834
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI VF
Sbjct: 835 FLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF 876
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 114/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ AD S+ Q +GT++ + QLE H ++V N+ I
Sbjct: 534 AVVMGPDGNLFGADVSD------QQNGTYLVSYRP------QLEGEHLVSVMMCNQHI-- 579
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 580 --ENSPFKVVVKSGRSYIGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 637
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQF+
Sbjct: 638 IQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDVSRRIVVADKDNHRIQIFTFEGQFILK 697
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV + G ILV D NHR+Q+F
Sbjct: 698 FGEKGTKNGQFNYPWDVAVNAEGKILVSDTRNHRVQLF 735
>gi|355747125|gb|EHH51739.1| hypothetical protein EGM_11175 [Macaca fascicularis]
Length = 694
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 420 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 479
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 480 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 539
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 540 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 592
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 593 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 652
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ GVA+ +G I+V D N+RI VF
Sbjct: 653 FLCKFGAQGSGFGQMDRPSGVAITPDGMIVVVDFGNNRILVF 694
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 118/202 (58%), Gaps = 13/202 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V +IV+D +N+R+Q
Sbjct: 405 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQ------- 457
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 458 VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFG 517
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 518 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 577
Query: 297 GVAVMSNGNILVCDRENHRIQV 318
GVA G+++V D NHR+ V
Sbjct: 578 GVAFNHEGHLVVTDFNNHRLLV 599
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 352 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI-- 397
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 398 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 455
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 456 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 515
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 516 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 553
>gi|426249765|ref|XP_004018619.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
71 [Ovis aries]
Length = 864
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 156/282 (55%), Gaps = 16/282 (5%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 594 LSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQF 653
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+QVF +G F+ KFG G K GQ +P +AV++ +
Sbjct: 654 DRPAGVACDAARRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 713
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHRVQ+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 714 ILVSDTRNHRVQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 766
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + R + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F P+G
Sbjct: 767 NNHRLPVI-XSARFL---GSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFEPNGS 822
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 823 FLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF 864
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 526 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI-- 571
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R
Sbjct: 572 --ENSPFKVLVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNR 629
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQ+FT +GQFL
Sbjct: 630 IQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDAARRIVVADKDNHRIQVFTFEGQFLLK 689
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHR+Q+F
Sbjct: 690 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRVQLF 727
>gi|345788869|ref|XP_534214.3| PREDICTED: tripartite motif-containing protein 71 [Canis lupus
familiaris]
Length = 868
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 594 LSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQF 653
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+QVF +G F+ KFG G K GQ +P +AV++ +
Sbjct: 654 DRPAGVACDTSRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 713
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 714 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 766
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 767 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 826
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 827 FLCKFGTQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF 868
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 119/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V ++V+D +N+R+Q
Sbjct: 579 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQ------- 631
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ GTF KFG++G++ GQ + P +A + R++V+D +NHR+Q+F G+ + FG
Sbjct: 632 VFKPCGTFHHKFGTLGSRPGQFDRPAGVACDTSRRIVVADKDNHRIQVFTFEGQFLLKFG 691
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 692 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 751
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 752 GVAFNHEGHLVVTDFNNHRLLVI 774
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 526 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTMCNQHI-- 571
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R
Sbjct: 572 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNR 629
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQ+FT +GQFL
Sbjct: 630 IQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDTSRRIVVADKDNHRIQVFTFEGQFLLK 689
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 690 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 727
>gi|395540340|ref|XP_003772113.1| PREDICTED: tripartite motif-containing protein 71-like [Sarcophilus
harrisii]
Length = 590
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 316 LAFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFYHKFGTLGSRPGQF 375
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 376 DRPAGVACDSSRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 435
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHRVQ+F DGTF+ K+G G + P + ++ ++V+D
Sbjct: 436 ILVSDTRNHRVQLFG-------PDGTFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDF 488
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+QIF +G
Sbjct: 489 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGS 548
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F+ FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 549 FICKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF 590
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 114/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ AD S+ Q +GT++ + QLE H ++V N+ I
Sbjct: 248 AVVMGPDGNLFGADISD------QQNGTYLVSYRP------QLEGEHLVSVMMCNQHI-- 293
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 294 --KNSPFKVLVKSGRSYVGIGLPGLAFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 351
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 352 IQVFKPCGTFYHKFGTLGSRPGQFDRPAGVACDSSRRIVVADKDNHRIQIFTFEGQFLLK 411
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHR+Q+F
Sbjct: 412 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRVQLF 449
>gi|338714782|ref|XP_001916815.2| PREDICTED: tripartite motif-containing protein 71-like [Equus
caballus]
Length = 665
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 391 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQF 450
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 451 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 510
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 511 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 563
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 564 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 623
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 624 FLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF 665
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 119/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V +IV+D +N+R+Q
Sbjct: 376 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQ------- 428
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ GTF KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 429 VFKPCGTFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFG 488
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 489 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 548
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 549 GVAFNHEGHLVVTDFNNHRLLVI 571
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 323 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTMCNQHI-- 368
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 369 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 426
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 427 IQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 486
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 487 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 524
>gi|403278974|ref|XP_003931053.1| PREDICTED: tripartite motif-containing protein 71, partial [Saimiri
boliviensis boliviensis]
Length = 671
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 397 LSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 456
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 457 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 516
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 517 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 569
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 570 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 629
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+A+ +G I+V D N+RI VF
Sbjct: 630 FLCKFGAQGSGFGQMDRPSGIAITPDGMIVVVDFGNNRILVF 671
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 118/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V ++V+D +N+R+Q
Sbjct: 382 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQ------- 434
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 435 VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFG 494
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 495 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 554
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 555 GVAFNHEGHLVVTDFNNHRLLVI 577
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 329 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI-- 374
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R
Sbjct: 375 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNR 432
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 433 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 492
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 493 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 530
>gi|440904148|gb|ELR54698.1| Tripartite motif-containing protein 71, partial [Bos grunniens
mutus]
Length = 661
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 387 LSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 446
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 447 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 506
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 507 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 559
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 560 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 619
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 620 FLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF 661
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 118/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V ++V+D +N+R+Q
Sbjct: 372 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQ------- 424
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 425 VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFG 484
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 485 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 544
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 545 GVAFNHEGHLVVTDFNNHRLLVI 567
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 319 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI-- 364
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R
Sbjct: 365 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNR 422
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 423 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 482
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 483 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 520
>gi|119914284|ref|XP_610389.3| PREDICTED: tripartite motif-containing protein 71 [Bos taurus]
Length = 803
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 529 LSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 588
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 589 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 648
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 649 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 701
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 702 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 761
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 762 FLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF 803
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 118/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V ++V+D +N+R+Q
Sbjct: 514 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQ------- 566
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 567 VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFG 626
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 627 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 686
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 687 GVAFNHEGHLVVTDFNNHRLLVI 709
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 461 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI-- 506
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R
Sbjct: 507 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNR 564
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 565 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 624
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 625 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 662
>gi|119584843|gb|EAW64439.1| hCG1642940 [Homo sapiens]
Length = 514
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 240 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 299
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 300 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 359
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 360 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 412
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 413 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 472
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+A+ +G I+V D N+RI VF
Sbjct: 473 FLCKFGAQGSGFGQMDRPSGIAITPDGMIVVVDFGNNRILVF 514
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 172 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI-- 217
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 218 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 275
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 276 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 335
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 336 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 373
>gi|425938104|sp|E1BJS7.2|LIN41_BOVIN RecName: Full=E3 ubiquitin-protein ligase TRIM71; AltName:
Full=Protein lin-41 homolog; AltName: Full=Tripartite
motif-containing protein 71
Length = 868
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 594 LSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 653
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 654 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 713
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 714 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 766
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 767 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 826
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 827 FLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF 868
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 118/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V ++V+D +N+R+Q
Sbjct: 579 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQ------- 631
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 632 VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFG 691
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 692 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 751
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 752 GVAFNHEGHLVVTDFNNHRLLVI 774
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 526 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI-- 571
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R
Sbjct: 572 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNR 629
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 630 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 689
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 690 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 727
>gi|355560091|gb|EHH16819.1| hypothetical protein EGK_12175 [Macaca mulatta]
Length = 720
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 446 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 505
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 506 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 565
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 566 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 618
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 619 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 678
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ GVA+ +G I+V D N+RI VF
Sbjct: 679 FLCKFGAQGSGFGQMDRPSGVAITPDGMIVVVDFGNNRILVF 720
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 118/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V +IV+D +N+R+Q
Sbjct: 431 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQ------- 483
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 484 VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFG 543
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 544 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 603
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 604 GVAFNHEGHLVVTDFNNHRLLVI 626
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 378 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI-- 423
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 424 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 481
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 482 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 541
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 542 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 579
>gi|432882538|ref|XP_004074080.1| PREDICTED: E3 ubiquitin-protein ligase TRIM71-like [Oryzias
latipes]
Length = 826
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/279 (39%), Positives = 153/279 (54%), Gaps = 12/279 (4%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWP 100
G G G P G+ V + +VVAD SN+R+Q+ P L F P
Sbjct: 555 GCEGEGDGQLCRPWGVCVDKEGYVVVADRSNNRIQIFKPCGTFHHKFGSLGSRPGQFDRP 614
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+A I+VAD NHRVQVF +G F+ KFG G K GQ +P +AV++ +++V
Sbjct: 615 AGVACDTQRRIIVADKDNHRVQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILV 674
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
SD+ NHRVQ+F DG+F+ K+G G + P +A ++ + ++V+D NNH
Sbjct: 675 SDTRNHRVQLF-------APDGSFLNKYGFEGALWKHFDSPRGVAFNHEDHLVVTDFNNH 727
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+ + + + GSEG+ GQ P+GV VD + I V DS N+RIQIF P+G FL
Sbjct: 728 RLLVIRPDCQSARFLGSEGTGNGQFLRPQGVTVDQENRIIVADSRNHRIQIFEPNGNFLC 787
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GSG G+ GVAVM +G I+V D N+RI F
Sbjct: 788 KFGTQGSGYGQMDRPSGVAVMPDGVIVVVDFGNNRILKF 826
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 126/238 (52%), Gaps = 20/238 (8%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------- 95
K GS GS PG F P G+A I+VAD NHRVQV F + +
Sbjct: 600 KFGSLGSRPGQFDRPAGVACDTQRRIIVADKDNHRVQV----FTFEGQFLLKFGEKGTKN 655
Query: 96 -AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F +P +AV + I+V+D+ NHRVQ+F DG+F+ K+G G + P +A ++
Sbjct: 656 GQFNYPWDVAVNSEGKILVSDTRNHRVQLFAPDGSFLNKYGFEGALWKHFDSPRGVAFNH 715
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ ++V+D NNHR+ V + D GS G GQ P + V NR+IV
Sbjct: 716 EDHLVVTDFNNHRL-------LVIRPDCQSARFLGSEGTGNGQFLRPQGVTVDQENRIIV 768
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+DS NHR+QIF+ NG + FG++GS GQ+ P GVAV G I V D GNNRI F
Sbjct: 769 ADSRNHRIQIFEPNGNFLCKFGTQGSGYGQMDRPSGVAVMPDGVIVVVDFGNNRILKF 826
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 112/196 (57%), Gaps = 7/196 (3%)
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGT 183
+ S G+ + FG G GQL P + V V+V+D +N+R+QIF + GT
Sbjct: 544 YGSLGSQMSSFGCEGEGDGQLCRPWGVCVDKEGYVVVADRSNNRIQIF-------KPCGT 596
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
F KFGS+G++ GQ + P +A R+IV+D +NHRVQ+F G+ + FG +G++ G
Sbjct: 597 FHHKFGSLGSRPGQFDRPAGVACDTQRRIIVADKDNHRVQVFTFEGQFLLKFGEKGTKNG 656
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
Q +P VAV+ +G I V D+ N+R+Q+F PDG FL +G G+ F GVA
Sbjct: 657 QFNYPWDVAVNSEGKILVSDTRNHRVQLFAPDGSFLNKYGFEGALWKHFDSPRGVAFNHE 716
Query: 304 GNILVCDRENHRIQVF 319
+++V D NHR+ V
Sbjct: 717 DHLVVTDFNNHRLLVI 732
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 110/217 (50%), Gaps = 16/217 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ D S+ + S+H+ +GT+ + + E H ++V N+ I
Sbjct: 485 VMSAADGSLTAVEVSDHQ------NGTYTVSY------LPKTEGEHLVSVLVCNQHI--- 529
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
+ ++ +GR + S G+ + FG G GQL P + V V+V+D +N+R+
Sbjct: 530 -HGSPFKVMVKSGRSYGSLGSQMSSFGCEGEGDGQLCRPWGVCVDKEGYVVVADRSNNRI 588
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
QIF G FGS GS GQ P GVA D Q I V D N+R+Q+FT +GQFL F
Sbjct: 589 QIFKPCGTFHHKFGSLGSRPGQFDRPAGVACDTQRRIIVADKDNHRVQVFTFEGQFLLKF 648
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ +G+F VAV S G ILV D NHR+Q+F
Sbjct: 649 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRVQLF 685
>gi|109052675|ref|XP_001098706.1| PREDICTED: tripartite motif-containing protein 71 [Macaca mulatta]
Length = 868
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 594 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 653
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 654 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 713
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 714 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 766
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 767 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 826
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ GVA+ +G I+V D N+RI VF
Sbjct: 827 FLCKFGAQGSGFGQMDRPSGVAITPDGMIVVVDFGNNRILVF 868
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 118/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V +IV+D +N+R+Q
Sbjct: 579 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQ------- 631
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 632 VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFG 691
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 692 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 751
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 752 GVAFNHEGHLVVTDFNNHRLLVI 774
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 526 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI-- 571
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 572 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 629
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 630 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 689
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 690 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 727
>gi|397512012|ref|XP_003826353.1| PREDICTED: tripartite motif-containing protein 71 [Pan paniscus]
Length = 743
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 469 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 528
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 529 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 588
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 589 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 641
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 642 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 701
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+A+ +G I+V D N+RI VF
Sbjct: 702 FLCKFGAQGSGFGQMDRPSGIAITPDGMIVVVDFGNNRILVF 743
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 118/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V +IV+D +N+R+Q
Sbjct: 454 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQ------- 506
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 507 VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFG 566
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 567 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 626
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 627 GVAFNHEGHLVVTDFNNHRLLVI 649
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 401 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI-- 446
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 447 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 504
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 505 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 564
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 565 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 602
>gi|297488395|ref|XP_002707823.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
71 [Bos taurus]
gi|296475115|tpg|DAA17230.1| TPA: tripartite motif-containing 71-like [Bos taurus]
Length = 876
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 602 LSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 661
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 662 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 721
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 722 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 774
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 775 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 834
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 835 FLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF 876
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 118/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V ++V+D +N+R+Q
Sbjct: 587 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQ------- 639
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 640 VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFG 699
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 700 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 759
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 760 GVAFNHEGHLVVTDFNNHRLLVI 782
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 534 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI-- 579
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R
Sbjct: 580 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNR 637
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 638 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 697
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 698 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 735
>gi|219851969|ref|YP_002466401.1| NHL repeat containing protein [Methanosphaerula palustris E1-9c]
gi|219546228|gb|ACL16678.1| NHL repeat containing protein [Methanosphaerula palustris E1-9c]
Length = 676
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 155/281 (55%), Gaps = 12/281 (4%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FT 98
+ GS GS G F P G+AV D +I V D++N R+Q T F
Sbjct: 33 QWGSSGSGDGQFNQPSGVAVDSDGNIYVVDTNNFRIQKFNATGGFTTQWGGSGPGDGQFN 92
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P G+AV + ++ +AD N+R+Q F S G F+ K+GS+G+ GQ P +A+ + V
Sbjct: 93 NPEGVAVDNNGNVYIADRDNNRIQKFNSSGGFLMKWGSIGSGDGQFNQPSGVALDSAGNV 152
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
V+D N+R+Q F+ S G F+ K+GS G+ GQ+ P +AV NT V V DS
Sbjct: 153 YVTDKQNNRIQKFN-------SSGGFLMKWGSEGSGDGQVHWPSGVAVDNTGSVYVVDSY 205
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
NHR+Q F+ G IT +GSEG+ +GQ K P GVAVD + V D+GN+RIQ F G F
Sbjct: 206 NHRIQKFNATGGFITKWGSEGTGDGQFKSPTGVAVDSVNNVYVVDTGNDRIQKFNSSGGF 265
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ G +G GDG+F EG+ S N+ V D N RIQ F
Sbjct: 266 ITTGGSFGHGDGQFWSPEGITADSANNVYVVDTLNDRIQKF 306
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 147/288 (51%), Gaps = 25/288 (8%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
K GS GS G F P G+A+ ++ V D N+R+Q ++ FL
Sbjct: 127 KWGSIGSGDGQFNQPSGVALDSAGNVYVTDKQNNRIQ------KFNSSGGFLMKWGSEGS 180
Query: 97 ----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
WP G+AV S+ V DS NHR+Q F + G F+ K+GS G GQ + P +AV
Sbjct: 181 GDGQVHWPSGVAVDNTGSVYVVDSYNHRIQKFNATGGFITKWGSEGTGDGQFKSPTGVAV 240
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
+ N V V D+ N R+Q F+ S G F+ GS G+ GQ P I + N V
Sbjct: 241 DSVNNVYVVDTGNDRIQKFN-------SSGGFITTGGSFGHGDGQFWSPEGITADSANNV 293
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSE-GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
V D+ N R+Q F+ G IT +GS GS +GQ VAVD G + V +SGN RIQ
Sbjct: 294 YVVDTLNDRIQKFNATGGFITKWGSALGSFDGQFSGLSDVAVDSTGNVYVAESGNCRIQK 353
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G F+ +G GSGDG+F G G+AV S N+ V + N RIQ F
Sbjct: 354 FNATGGFITKWGSEGSGDGQFNGPTGIAVDSADNVYVVEIWNCRIQKF 401
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 145/282 (51%), Gaps = 13/282 (4%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FT 98
K GS GS G WP G+AV S+ V DS NHR+Q T F
Sbjct: 174 KWGSEGSGDGQVHWPSGVAVDNTGSVYVVDSYNHRIQKFNATGGFITKWGSEGTGDGQFK 233
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P G+AV N++ V D+ N R+Q F S G F+ GS G+ GQ P I + N V
Sbjct: 234 SPTGVAVDSVNNVYVVDTGNDRIQKFNSSGGFITTGGSFGHGDGQFWSPEGITADSANNV 293
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGS-MGNKAGQLEHPHYIAVSNTNRVIVSDS 217
V D+ N R+Q F+ G F+ K+GS +G+ GQ +AV +T V V++S
Sbjct: 294 YVVDTLNDRIQKFNATGG-------FITKWGSALGSFDGQFSGLSDVAVDSTGNVYVAES 346
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
N R+Q F+ G IT +GSEGS +GQ P G+AVD + V + N RIQ F G
Sbjct: 347 GNCRIQKFNATGGFITKWGSEGSGDGQFNGPTGIAVDSADNVYVVEIWNCRIQKFNSTGG 406
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL +G +GSGDG+F G+AV S GNI V D ++Q F
Sbjct: 407 FLMKWGSYGSGDGQFNKPSGIAVDSAGNIYVTDANKCQVQKF 448
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 145/287 (50%), Gaps = 23/287 (8%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWPRGI 103
GS G F+ +AV ++ VA+S N R+Q T F P GI
Sbjct: 321 GSFDGQFSGLSDVAVDSTGNVYVAESGNCRIQKFNATGGFITKWGSEGSGDGQFNGPTGI 380
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 163
AV +++ V + N R+Q F S G F+ K+GS G+ GQ P IAV + + V+D+
Sbjct: 381 AVDSADNVYVVEIWNCRIQKFNSTGGFLMKWGSYGSGDGQFNKPSGIAVDSAGNIYVTDA 440
Query: 164 NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
N +VQ FD NG TFV ++GS G Q +P+ I V N V V DS+N R+Q
Sbjct: 441 NKCQVQKFDQNG-------TFVTQWGSFGTGDEQFFYPNDITVDNAGNVYVVDSDNPRIQ 493
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG-----------DSGNNRIQIF 272
F+ G IT + S + GQ P GVAVD G + V + +R+Q F
Sbjct: 494 KFNSTGGFITKWDSFSTGNGQFNRPCGVAVDSAGNVYVTCFQILYTCGPPELIQSRVQKF 553
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
TP+G F+ +G GSGDG+F GVAV S GN+ V D N+RIQ F
Sbjct: 554 TPNGTFITEWGSLGSGDGQFNRPSGVAVDSAGNVYVADSGNNRIQKF 600
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 148/319 (46%), Gaps = 60/319 (18%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------------CFPHFDLKTN 91
K GS G+ G F P G+AV N++ V D+ N R+Q F H D +
Sbjct: 221 KWGSEGTGDGQFKSPTGVAVDSVNNVYVVDTGNDRIQKFNSSGGFITTGGSFGHGDGQ-- 278
Query: 92 CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS-MGNKAGQLEHPHYI 150
F P GI N++ V D+ N R+Q F + G F+ K+GS +G+ GQ +
Sbjct: 279 -----FWSPEGITADSANNVYVVDTLNDRIQKFNATGGFITKWGSALGSFDGQFSGLSDV 333
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNG----------------------------------- 175
AV +T V V++S N R+Q F+ G
Sbjct: 334 AVDSTGNVYVAESGNCRIQKFNATGGFITKWGSEGSGDGQFNGPTGIAVDSADNVYVVEI 393
Query: 176 -----RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
+ F S G F+ K+GS G+ GQ P IAV + + V+D+N +VQ FD NG
Sbjct: 394 WNCRIQKFNSTGGFLMKWGSYGSGDGQFNKPSGIAVDSAGNIYVTDANKCQVQKFDQNGT 453
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+T +GS G+ + Q +P + VD+ G + V DS N RIQ F G F+ + + +G+G
Sbjct: 454 FVTQWGSFGTGDEQFFYPNDITVDNAGNVYVVDSDNPRIQKFNSTGGFITKWDSFSTGNG 513
Query: 291 EFKGLEGVAVMSNGNILVC 309
+F GVAV S GN+ V
Sbjct: 514 QFNRPCGVAVDSAGNVYVT 532
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 112/201 (55%), Gaps = 9/201 (4%)
Query: 121 VQVFQSDGTFV--GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVF 178
VQV ++G +V ++GS G+ GQ P +AV + + V D+NN R+Q F+ G
Sbjct: 19 VQVVWAEGGYVYTTQWGSSGSGDGQFNQPSGVAVDSDGNIYVVDTNNFRIQKFNATGG-- 76
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSE 238
F ++G G GQ +P +AV N V ++D +N+R+Q F+ +G + +GS
Sbjct: 77 -----FTTQWGGSGPGDGQFNNPEGVAVDNNGNVYIADRDNNRIQKFNSSGGFLMKWGSI 131
Query: 239 GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGV 298
GS +GQ P GVA+D G + V D NNRIQ F G FL +G GSGDG+ GV
Sbjct: 132 GSGDGQFNQPSGVALDSAGNVYVTDKQNNRIQKFNSSGGFLMKWGSEGSGDGQVHWPSGV 191
Query: 299 AVMSNGNILVCDRENHRIQVF 319
AV + G++ V D NHRIQ F
Sbjct: 192 AVDNTGSVYVVDSYNHRIQKF 212
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 120/252 (47%), Gaps = 35/252 (13%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
K GS GS G F P GIAV +++ V + N R+Q + FL
Sbjct: 363 KWGSEGSGDGQFNGPTGIAVDSADNVYVVEIWNCRIQ------KFNSTGGFLMKWGSYGS 416
Query: 97 ----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
F P GIAV +I V D++ +VQ F +GTFV ++GS G Q +P+ I V
Sbjct: 417 GDGQFNKPSGIAVDSAGNIYVTDANKCQVQKFDQNGTFVTQWGSFGTGDEQFFYPNDITV 476
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
N V V DS+N R+Q F+ S G F+ K+ S GQ P +AV + V
Sbjct: 477 DNAGNVYVVDSDNPRIQKFN-------STGGFITKWDSFSTGNGQFNRPCGVAVDSAGNV 529
Query: 213 IVS-----------DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISV 261
V+ + RVQ F NG IT +GS GS +GQ P GVAVD G + V
Sbjct: 530 YVTCFQILYTCGPPELIQSRVQKFTPNGTFITEWGSLGSGDGQFNRPSGVAVDSAGNVYV 589
Query: 262 GDSGNNRIQIFT 273
DSGNNRIQ F
Sbjct: 590 ADSGNNRIQKFA 601
>gi|395816935|ref|XP_003781938.1| PREDICTED: tripartite motif-containing protein 71 [Otolemur
garnettii]
Length = 776
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 502 LSFGSEGDSDGKLCRPWGVSVDREGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 561
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+QVF +G F+ KFG G K GQ +P +AV++ +
Sbjct: 562 DRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 621
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 622 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 674
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 675 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 734
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI VF
Sbjct: 735 FLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF 776
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ AD S+ Q +GT+V + QLE H I+V+ N+ I
Sbjct: 434 AVVLGPDGNLFGADVSD------QQNGTYVVSYRP------QLEGEHLISVTMCNQHI-- 479
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 480 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDREGYIIVADRSNNR 537
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQ+FT +GQFL
Sbjct: 538 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLK 597
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 598 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 635
>gi|402861821|ref|XP_003895276.1| PREDICTED: tripartite motif-containing protein 71 [Papio anubis]
Length = 868
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 594 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 653
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 654 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 713
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 714 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 766
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 767 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 826
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ GVA+ +G I+V D N+RI VF
Sbjct: 827 FLCKFGAQGSGFGQMDRPSGVAITPDGMIVVVDFGNNRILVF 868
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 118/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V +IV+D +N+R+Q
Sbjct: 579 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQ------- 631
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 632 VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFG 691
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 692 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 751
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 752 GVAFNHEGHLVVTDFNNHRLLVI 774
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 526 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI-- 571
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 572 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 629
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 630 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 689
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 690 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 727
>gi|444509209|gb|ELV09203.1| Tripartite motif-containing protein 71, partial [Tupaia chinensis]
Length = 584
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 310 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 369
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 370 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 429
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 430 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 482
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 483 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 542
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 543 FLCKFGAQGSGFGQMDRPSGIAVTPDGLIVVVDFGNNRILIF 584
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 118/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V +IV+D +N+R+Q
Sbjct: 295 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQ------- 347
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 348 VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFG 407
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 408 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 467
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 468 GVAFNHEGHLVVTDFNNHRLLVI 490
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 242 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTMCNQHI-- 287
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 288 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 345
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 346 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 405
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 406 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 443
>gi|426339856|ref|XP_004033855.1| PREDICTED: tripartite motif-containing protein 71 [Gorilla gorilla
gorilla]
Length = 868
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 594 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 653
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 654 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 713
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 714 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 766
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 767 NNHRLLVIHPDCQSACFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 826
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+A+ +G I+V D N+RI VF
Sbjct: 827 FLCKFGAQGSGFGQMDRPSGIAITPDGMIVVVDFGNNRILVF 868
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 118/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V +IV+D +N+R+Q
Sbjct: 579 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQ------- 631
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 632 VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFG 691
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 692 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 751
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 752 GVAFNHEGHLVVTDFNNHRLLVI 774
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 526 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI-- 571
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 572 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 629
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 630 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 689
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 690 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 727
>gi|395734031|ref|XP_003776339.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
71 [Pongo abelii]
Length = 868
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 594 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 653
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 654 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 713
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 714 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 766
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 767 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 826
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+A+ +G I+V D N+RI VF
Sbjct: 827 FLCKFGAQGSGFGQMDRPSGIAITPDGMIVVVDFGNNRILVF 868
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 118/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V +IV+D +N+R+Q
Sbjct: 579 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQ------- 631
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 632 VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFG 691
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 692 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 751
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 752 GVAFNHEGHLVVTDFNNHRLLVI 774
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 526 AVVLGPDGNLFAAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI-- 571
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 572 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 629
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 630 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 689
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 690 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 727
>gi|156408004|ref|XP_001641647.1| predicted protein [Nematostella vectensis]
gi|156228786|gb|EDO49584.1| predicted protein [Nematostella vectensis]
Length = 799
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 183/341 (53%), Gaps = 41/341 (12%)
Query: 1 RCIPSEAK-NINSCF-LLQTLLVSGIGQVGTTPRSQYLQKRRLQF-----------KIGS 47
R +P+E + N N + + T +G+ +V T R +++Q + K G
Sbjct: 469 RTVPAEVEDNRNGTYGVSYTPQSTGMHKVSVTVRDKHIQGSPFKVNVMNPGSDSFVKFGR 528
Query: 48 RGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------AFT 98
+GS+ G F G+AV + I+V D NHRVQV F+ + +F F
Sbjct: 529 KGSDIGEFNGIFGVAVDDEGRIIVTDCHNHRVQV----FNAQGAFMFQFGRKGEGSGQFQ 584
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P G+ + P+ IVV + + R+Q+F DG F KF KA L AV R+
Sbjct: 585 CPTGVGIDPEGRIVVCERLSPRIQIFDRDGMFQQKFHVPDLKASTL------AVDENRRI 638
Query: 159 IVSDSNNHRVQIFDVN-GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
IV+DS N + + ++ G+ F KFGS G+ G+L +P Y+AV+ +IVSD
Sbjct: 639 IVADSANRCIHVISLDTGQSF--------KFGSFGDGNGELSYPCYVAVNPQGHIIVSDM 690
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
++HR+QIFD GR + +FG +GS++G+L+ P GVAV G+I V D N+RIQ+F+ DG+
Sbjct: 691 HSHRIQIFDSRGRFLFNFGRKGSQDGELQRPTGVAVMQNGHIIVADRDNHRIQVFSSDGR 750
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
+ FG G GDG+ G+A+ +GNI + D N+R+QV
Sbjct: 751 YFAKFGSKGEGDGQLNDPHGLALTPDGNICIADFRNNRVQV 791
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 124/218 (56%), Gaps = 13/218 (5%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
G+AV + I+V D NHRVQVF + G F+ +FG G +GQ + P + + R++V
Sbjct: 541 GVAVDDEGRIIVTDCHNHRVQVFNAQGAFMFQFGRKGEGSGQFQCPTGVGIDPEGRIVVC 600
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
+ + R+QIFD DG F KF KA L AV R+IV+DS N
Sbjct: 601 ERLSPRIQIFD-------RDGMFQQKFHVPDLKASTL------AVDENRRIIVADSANRC 647
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+ + ++ FGS G G+L +P VAV+ QG+I V D ++RIQIF G+FL
Sbjct: 648 IHVISLDTGQSFKFGSFGDGNGELSYPCYVAVNPQGHIIVSDMHSHRIQIFDSRGRFLFN 707
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GS DGE + GVAVM NG+I+V DR+NHRIQVF
Sbjct: 708 FGRKGSQDGELQRPTGVAVMQNGHIIVADRDNHRIQVF 745
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%)
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
+V + + FG +GS+ G+ GVAVDD+G I V D N+R+Q+F G F+
Sbjct: 512 KVNVMNPGSDSFVKFGRKGSDIGEFNGIFGVAVDDEGRIIVTDCHNHRVQVFNAQGAFMF 571
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G G G+F+ GV + G I+VC+R + RIQ+F
Sbjct: 572 QFGRKGEGSGQFQCPTGVGIDPEGRIVVCERLSPRIQIF 610
>gi|149018348|gb|EDL76989.1| similar to abnormal cell LINeage LIN-41, heterochronic gene (Lin41)
(predicted), isoform CRA_b [Rattus norvegicus]
gi|149018349|gb|EDL76990.1| similar to abnormal cell LINeage LIN-41, heterochronic gene (Lin41)
(predicted), isoform CRA_b [Rattus norvegicus]
Length = 514
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 240 LSFGSEGDGEGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGSFHHKFGTLGSRPGQF 299
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 300 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 359
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G+ + P +A ++ ++V+D
Sbjct: 360 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGSLWKHFDSPRGVAFNHEGHLVVTDF 412
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 413 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFEANGS 472
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV G I+V D N+RI +F
Sbjct: 473 FLCKFGAQGSGFGQMDRPSGIAVTPEGLIVVVDFGNNRILIF 514
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 114/191 (59%), Gaps = 7/191 (3%)
Query: 128 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK 187
G V FGS G+ G+L P ++V +IV+D +N+R+Q VF+ G+F K
Sbjct: 236 GLPVLSFGSEGDGEGKLCRPWGVSVDKEGYIIVADRSNNRIQ-------VFKPCGSFHHK 288
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG +G++ GQ +
Sbjct: 289 FGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNY 348
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P VAV+ +G I V D+ N+RIQ+F PDG FL +G GS F GVA G+++
Sbjct: 349 PWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGSLWKHFDSPRGVAFNHEGHLV 408
Query: 308 VCDRENHRIQV 318
V D NHR+ V
Sbjct: 409 VTDFNNHRLLV 419
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 116/217 (53%), Gaps = 16/217 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 173 VVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLYNQHI--- 217
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G V FGS G+ G+L P ++V +IV+D +N+R+
Sbjct: 218 -ENSPFKVVVKSGRSYVGIGLPVLSFGSEGDGEGKLCRPWGVSVDKEGYIIVADRSNNRI 276
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL F
Sbjct: 277 QVFKPCGSFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKF 336
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 337 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 373
>gi|84993742|ref|NP_001034200.1| E3 ubiquitin-protein ligase TRIM71 [Homo sapiens]
gi|121941685|sp|Q2Q1W2.1|LIN41_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM71; AltName:
Full=Protein lin-41 homolog; AltName: Full=Tripartite
motif-containing protein 71
gi|78068056|gb|ABB18374.1| LIN41 [Homo sapiens]
gi|162319272|gb|AAI56153.1| Tripartite motif-containing 71 [synthetic construct]
gi|162319430|gb|AAI57053.1| Tripartite motif-containing 71 [synthetic construct]
Length = 868
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 594 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 653
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 654 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 713
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 714 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 766
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 767 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 826
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+A+ +G I+V D N+RI VF
Sbjct: 827 FLCKFGAQGSGFGQMDRPSGIAITPDGMIVVVDFGNNRILVF 868
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 118/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V +IV+D +N+R+Q
Sbjct: 579 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQ------- 631
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 632 VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFG 691
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 692 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 751
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 752 GVAFNHEGHLVVTDFNNHRLLVI 774
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 526 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI-- 571
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 572 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 629
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 630 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 689
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 690 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 727
>gi|332816515|ref|XP_516352.3| PREDICTED: tripartite motif-containing protein 71 [Pan troglodytes]
Length = 804
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 530 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 589
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 590 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 649
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 650 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 702
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 703 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 762
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+A+ +G I+V D N+RI VF
Sbjct: 763 FLCKFGAQGSGFGQMDRPSGIAITPDGMIVVVDFGNNRILVF 804
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 118/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V +IV+D +N+R+Q
Sbjct: 515 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQ------- 567
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 568 VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFG 627
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 628 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 687
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 688 GVAFNHEGHLVVTDFNNHRLLVI 710
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 462 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI-- 507
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 508 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 565
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 566 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 625
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 626 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 663
>gi|332215471|ref|XP_003256868.1| PREDICTED: E3 ubiquitin-protein ligase TRIM71 [Nomascus leucogenys]
Length = 868
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 594 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 653
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 654 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 713
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 714 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 766
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 767 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 826
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+A+ +G I+V D N+RI VF
Sbjct: 827 FLCKFGAQGSGFGQMDRPSGIAITPDGMIVVVDFGNNRILVF 868
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 118/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V +IV+D +N+R+Q
Sbjct: 579 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQ------- 631
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 632 VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFG 691
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 692 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 751
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 752 GVAFNHEGHLVVTDFNNHRLLVI 774
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ ++ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 526 AVVLGPDGNLFGAEVND------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI-- 571
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 572 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 629
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 630 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 689
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 690 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 727
>gi|296228308|ref|XP_002807716.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
71 [Callithrix jacchus]
Length = 868
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 594 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 653
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 654 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 713
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 714 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 766
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 767 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 826
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+A+ +G I+V D N+RI VF
Sbjct: 827 FLCKFGAQGSGFGQMDRPSGIAITPDGMIVVVDFGNNRILVF 868
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 118/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V +IV+D +N+R+Q
Sbjct: 579 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQ------- 631
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 632 VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFG 691
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 692 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 751
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 752 GVAFNHEGHLVVTDFNNHRLLVI 774
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 526 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI-- 571
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 572 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 629
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 630 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLK 689
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 690 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 727
>gi|300796713|ref|NP_001178730.1| E3 ubiquitin-protein ligase TRIM71 [Rattus norvegicus]
gi|425936252|sp|D3ZVM4.1|LIN41_RAT RecName: Full=E3 ubiquitin-protein ligase TRIM71; AltName:
Full=Protein lin-41 homolog; AltName: Full=Tripartite
motif-containing protein 71
Length = 855
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 154/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 581 LSFGSEGDGEGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGSFHHKFGTLGSRPGQF 640
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 641 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 700
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G+ + P +A ++ ++V+D
Sbjct: 701 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGSLWKHFDSPRGVAFNHEGHLVVTDF 753
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 754 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFEANGS 813
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV G I+V D N+RI +F
Sbjct: 814 FLCKFGAQGSGFGQMDRPSGIAVTPEGLIVVVDFGNNRILIF 855
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 114/192 (59%), Gaps = 7/192 (3%)
Query: 128 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK 187
G V FGS G+ G+L P ++V +IV+D +N+R+Q VF+ G+F K
Sbjct: 577 GLPVLSFGSEGDGEGKLCRPWGVSVDKEGYIIVADRSNNRIQ-------VFKPCGSFHHK 629
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG +G++ GQ +
Sbjct: 630 FGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNY 689
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P VAV+ +G I V D+ N+RIQ+F PDG FL +G GS F GVA G+++
Sbjct: 690 PWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGSLWKHFDSPRGVAFNHEGHLV 749
Query: 308 VCDRENHRIQVF 319
V D NHR+ V
Sbjct: 750 VTDFNNHRLLVI 761
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 116/217 (53%), Gaps = 16/217 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 514 VVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLYNQHI--- 558
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G V FGS G+ G+L P ++V +IV+D +N+R+
Sbjct: 559 -ENSPFKVVVKSGRSYVGIGLPVLSFGSEGDGEGKLCRPWGVSVDKEGYIIVADRSNNRI 617
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL F
Sbjct: 618 QVFKPCGSFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKF 677
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 678 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 714
>gi|327261774|ref|XP_003215703.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
71-like [Anolis carolinensis]
Length = 922
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 107/279 (38%), Positives = 152/279 (54%), Gaps = 12/279 (4%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWP 100
S G G P G++V + I+VAD SN+R+QV P L F P
Sbjct: 651 ASEGDGDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRP 710
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+A I+VAD NHR+Q+F DG F+ KFG G K GQ +P +AV++ +++V
Sbjct: 711 AGVASDSSRRIIVADKDNHRIQIFTFDGQFILKFGEKGTKNGQFNYPWDVAVNSEGKILV 770
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
SD+ NHRVQ+F DG F+ K+G G + P + ++ ++V+D NNH
Sbjct: 771 SDTRNHRVQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNH 823
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+QIF P+G FL
Sbjct: 824 RLLVIHPDCQSARFLGSEGTSNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFEPNGSFLC 883
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GSG G+ G+ V +G ++V D N+RI VF
Sbjct: 884 KFGTQGSGFGQMDRPSGITVTPDGMVVVVDFGNNRILVF 922
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 123/236 (52%), Gaps = 16/236 (6%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
K G+ GS PG F P G+A I+VAD NHR+Q+ FD + F
Sbjct: 696 KFGTLGSRPGQFDRPAGVASDSSRRIIVADKDNHRIQIF--TFDGQFILKFGEKGTKNGQ 753
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F +P +AV + I+V+D+ NHRVQ+F DG F+ K+G G + P + ++
Sbjct: 754 FNYPWDVAVNSEGKILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEG 813
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++V+D NNHR+ V D GS G GQ P +AV R+IV+D
Sbjct: 814 HLVVTDFNNHRL-------LVIHPDCQSARFLGSEGTSNGQFLRPQGVAVDQEGRIIVAD 866
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
S NHRVQIF+ NG + FG++GS GQ+ P G+ V G + V D GNNRI +F
Sbjct: 867 SRNHRVQIFEPNGSFLCKFGTQGSGFGQMDRPSGITVTPDGMVVVVDFGNNRILVF 922
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 111/186 (59%), Gaps = 7/186 (3%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
F S G+ G+L P ++V +IV+D +N+R+Q VF+ G F KFG++G+
Sbjct: 650 FASEGDGDGKLCRPWGVSVDKEGYIIVADRSNNRIQ-------VFKPCGAFHHKFGTLGS 702
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
+ GQ + P +A ++ R+IV+D +NHR+QIF +G+ I FG +G++ GQ +P VAV
Sbjct: 703 RPGQFDRPAGVASDSSRRIIVADKDNHRIQIFTFDGQFILKFGEKGTKNGQFNYPWDVAV 762
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
+ +G I V D+ N+R+Q+F PDG FL +G G+ F GV G+++V D N
Sbjct: 763 NSEGKILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNN 822
Query: 314 HRIQVF 319
HR+ V
Sbjct: 823 HRLLVI 828
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 112/218 (51%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ AD + Q +GT+ M N Q+E H I+V N+ I
Sbjct: 580 AVVMGPDGNLFGADIGD------QQNGTY------MINYRPQMEGEHLISVMMCNQHI-- 625
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G F S G+ G+L P ++V +IV+D +N+R
Sbjct: 626 --ENSPFKVTVKSGRSYVGIGLPGLCFASEGDGDGKLCRPWGVSVDKEGYIIVADRSNNR 683
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT DGQF+
Sbjct: 684 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVASDSSRRIIVADKDNHRIQIFTFDGQFILK 743
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHR+Q+F
Sbjct: 744 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRVQLF 781
>gi|410971769|ref|XP_003992337.1| PREDICTED: tripartite motif-containing protein 71 [Felis catus]
Length = 628
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 153/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 354 LSFGSEGDGDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 413
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+QVF +G F+ KFG G K GQ +P +AV+ +
Sbjct: 414 DRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNAEGK 473
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D
Sbjct: 474 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF 526
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 527 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 586
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 587 FLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF 628
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 118/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V ++V+D +N+R+Q
Sbjct: 339 VVKSGRSYVGIGLPGLSFGSEGDGDGKLCRPWGVSVDKEGYIVVADRSNNRIQ------- 391
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+Q+F G+ + FG
Sbjct: 392 VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLKFG 451
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 452 EKGTKNGQFNYPWDVAVNAEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 511
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 512 GVAFNHEGHLVVTDFNNHRLLVI 534
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 286 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTMCNQHI-- 331
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R
Sbjct: 332 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDGDGKLCRPWGVSVDKEGYIVVADRSNNR 389
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQ+FT +GQFL
Sbjct: 390 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLK 449
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV + G ILV D NHRIQ+F
Sbjct: 450 FGEKGTKNGQFNYPWDVAVNAEGKILVSDTRNHRIQLF 487
>gi|348542162|ref|XP_003458555.1| PREDICTED: tripartite motif-containing protein 71-like [Oreochromis
niloticus]
Length = 840
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 153/279 (54%), Gaps = 12/279 (4%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWP 100
GS G G P GI V + +VVAD SN+R+Q+ P L F P
Sbjct: 569 GSEGEGDGQLCRPWGICVDKEGYVVVADRSNNRIQIFKPCGAFHHKFGSLGSRPGQFDRP 628
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+A IVVAD NHRVQVF +G F+ KFG G K GQ +P +AV++ +++V
Sbjct: 629 AGVACDSQRRIVVADKDNHRVQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILV 688
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
SD+ NHRVQ+F DG+F+ K+G G + P +A ++ + ++V+D NNH
Sbjct: 689 SDTRNHRVQLF-------APDGSFLNKYGFEGALWKHFDSPRGVAFNHEDHLVVTDFNNH 741
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+ + + + GSEG+ GQ P+GVAVD + I V DS N+RIQIF P+G FL
Sbjct: 742 RLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVADSRNHRIQIFEPNGNFLC 801
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GS G+ GVAV +G I+V D N+RI F
Sbjct: 802 KFGSQGSSFGQMDRPSGVAVSPDGAIVVVDFGNNRILKF 840
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 127/238 (53%), Gaps = 20/238 (8%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------- 95
K GS GS PG F P G+A IVVAD NHRVQV F + +
Sbjct: 614 KFGSLGSRPGQFDRPAGVACDSQRRIVVADKDNHRVQV----FTFEGQFLLKFGEKGTKN 669
Query: 96 -AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F +P +AV + I+V+D+ NHRVQ+F DG+F+ K+G G + P +A ++
Sbjct: 670 GQFNYPWDVAVNSEGKILVSDTRNHRVQLFAPDGSFLNKYGFEGALWKHFDSPRGVAFNH 729
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ ++V+D NNHR+ V + D GS G GQ P +AV NR+IV
Sbjct: 730 EDHLVVTDFNNHRL-------LVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIV 782
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+DS NHR+QIF+ NG + FGS+GS GQ+ P GVAV G I V D GNNRI F
Sbjct: 783 ADSRNHRIQIFEPNGNFLCKFGSQGSSFGQMDRPSGVAVSPDGAIVVVDFGNNRILKF 840
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 113/196 (57%), Gaps = 7/196 (3%)
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGT 183
+ S GT V FGS G GQL P I V V+V+D +N+R+QIF + G
Sbjct: 558 YGSLGTQVSSFGSEGEGDGQLCRPWGICVDKEGYVVVADRSNNRIQIF-------KPCGA 610
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
F KFGS+G++ GQ + P +A + R++V+D +NHRVQ+F G+ + FG +G++ G
Sbjct: 611 FHHKFGSLGSRPGQFDRPAGVACDSQRRIVVADKDNHRVQVFTFEGQFLLKFGEKGTKNG 670
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
Q +P VAV+ +G I V D+ N+R+Q+F PDG FL +G G+ F GVA
Sbjct: 671 QFNYPWDVAVNSEGKILVSDTRNHRVQLFAPDGSFLNKYGFEGALWKHFDSPRGVAFNHE 730
Query: 304 GNILVCDRENHRIQVF 319
+++V D NHR+ V
Sbjct: 731 DHLVVTDFNNHRLLVI 746
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 85/146 (58%)
Query: 174 NGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT 233
+GR + S GT V FGS G GQL P I V V+V+D +N+R+QIF G
Sbjct: 554 SGRSYGSLGTQVSSFGSEGEGDGQLCRPWGICVDKEGYVVVADRSNNRIQIFKPCGAFHH 613
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
FGS GS GQ P GVA D Q I V D N+R+Q+FT +GQFL FG G+ +G+F
Sbjct: 614 KFGSLGSRPGQFDRPAGVACDSQRRIVVADKDNHRVQVFTFEGQFLLKFGEKGTKNGQFN 673
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
VAV S G ILV D NHR+Q+F
Sbjct: 674 YPWDVAVNSEGKILVSDTRNHRVQLF 699
>gi|301767340|ref|XP_002919092.1| PREDICTED: tripartite motif-containing protein 71-like [Ailuropoda
melanoleuca]
Length = 788
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 153/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 514 LSFGSEGDGDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 573
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+QVF +G F+ KFG G K GQ +P +AV++ +
Sbjct: 574 DRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 633
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A + ++V+D
Sbjct: 634 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNPEGHLVVTDF 686
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 687 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 746
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 747 FLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF 788
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 446 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTMCNQHI-- 491
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R
Sbjct: 492 --ENSPFKVVVKSGRSYAGIGLPGLSFGSEGDGDGKLCRPWGVSVDKEGYIVVADRSNNR 549
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQ+FT +GQFL
Sbjct: 550 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLK 609
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 610 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 647
>gi|281352251|gb|EFB27835.1| hypothetical protein PANDA_007663 [Ailuropoda melanoleuca]
Length = 855
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 153/282 (54%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 581 LSFGSEGDGDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 640
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+QVF +G F+ KFG G K GQ +P +AV++ +
Sbjct: 641 DRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 700
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A + ++V+D
Sbjct: 701 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNPEGHLVVTDF 753
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 754 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS 813
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 814 FLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF 855
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 513 AVVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTMCNQHI-- 558
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R
Sbjct: 559 --ENSPFKVVVKSGRSYAGIGLPGLSFGSEGDGDGKLCRPWGVSVDKEGYIVVADRSNNR 616
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQ+FT +GQFL
Sbjct: 617 IQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLK 676
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 677 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 714
>gi|219852087|ref|YP_002466519.1| NHL repeat containing protein [Methanosphaerula palustris E1-9c]
gi|219546346|gb|ACL16796.1| NHL repeat containing protein [Methanosphaerula palustris E1-9c]
Length = 668
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 159/282 (56%), Gaps = 13/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
+ GS GSE G F P+GIA+ ++++ VADS N RVQ T F
Sbjct: 221 MQWGSSGSEAGQFEIPQGIAMDSNDNVYVADSGN-RVQKFTSAGTFITQWGTKGSEAGQF 279
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
+ P GIAV +++ + D N+RVQ F S GTF+ ++GS G + GQ P+ AV +
Sbjct: 280 SNPFGIAVDSADNVYITDVYNNRVQKFTSAGTFITQWGSQGLEVGQFNMPYGDAVDSAGN 339
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
V V+D N RVQ F NG TF+ ++GS G+ GQ P+ IAV + + V V+D
Sbjct: 340 VYVTDLGNSRVQKFTANG-------TFITEWGSSGSGDGQFNMPYGIAVDSADNVYVADL 392
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NN+RVQ F+ G +T +G GS GQ P GVAVD G + V D GNNR+Q+FT G
Sbjct: 393 NNNRVQKFNSTGSYLTQWGMTGSGNGQFDQPCGVAVDRFGIVYVTDFGNNRVQMFTSAGG 452
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+L +G G G G+F G G+A+ S GN+ + D N+R+Q F
Sbjct: 453 YLSQWGSHGPGAGQFSGPNGIALDSTGNVYITDWGNNRVQKF 494
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 161/287 (56%), Gaps = 25/287 (8%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
+ G++GSE G P +AV I VAD N+RVQV + +L
Sbjct: 128 QWGTKGSEEGQLDQPGSVAVDSRGQIYVADWGNNRVQV------FNSTGGYLMQWGSSGS 181
Query: 97 ----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
F P GIA+ ++ V D+ N+R+Q F S G ++ ++GS G++AGQ E P IA+
Sbjct: 182 GDGQFDGPNGIAIDSTGNVYVTDAYNNRIQEFNSTGGYLMQWGSSGSEAGQFEIPQGIAM 241
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
+ + V V+DS N RVQ F S GTF+ ++G+ G++AGQ +P IAV + + V
Sbjct: 242 DSNDNVYVADSGN-RVQ-------KFTSAGTFITQWGTKGSEAGQFSNPFGIAVDSADNV 293
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
++D N+RVQ F G IT +GS+G E GQ P G AVD G + V D GN+R+Q F
Sbjct: 294 YITDVYNNRVQKFTSAGTFITQWGSQGLEVGQFNMPYGDAVDSAGNVYVTDLGNSRVQKF 353
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
T +G F+ +G GSGDG+F G+AV S N+ V D N+R+Q F
Sbjct: 354 TANGTFITEWGSSGSGDGQFNMPYGIAVDSADNVYVADLNNNRVQKF 400
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 159/288 (55%), Gaps = 25/288 (8%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------ 96
+ GS GS G F P GIA+ ++ V D+ N+R+Q + + +L
Sbjct: 174 MQWGSSGSGDGQFDGPNGIAIDSTGNVYVTDAYNNRIQ------EFNSTGGYLMQWGSSG 227
Query: 97 -----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
F P+GIA+ ++++ VADS N RVQ F S GTF+ ++G+ G++AGQ +P IA
Sbjct: 228 SEAGQFEIPQGIAMDSNDNVYVADSGN-RVQKFTSAGTFITQWGTKGSEAGQFSNPFGIA 286
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V + + V ++D N+RVQ F S GTF+ ++GS G + GQ P+ AV +
Sbjct: 287 VDSADNVYITDVYNNRVQ-------KFTSAGTFITQWGSQGLEVGQFNMPYGDAVDSAGN 339
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
V V+D N RVQ F NG IT +GS GS +GQ P G+AVD + V D NNR+Q
Sbjct: 340 VYVTDLGNSRVQKFTANGTFITEWGSSGSGDGQFNMPYGIAVDSADNVYVADLNNNRVQK 399
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G +L +G GSG+G+F GVAV G + V D N+R+Q+F
Sbjct: 400 FNSTGSYLTQWGMTGSGNGQFDQPCGVAVDRFGIVYVTDFGNNRVQMF 447
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/281 (38%), Positives = 155/281 (55%), Gaps = 12/281 (4%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ--VCFPHFDLKTNCVFLA---FT 98
+ G++GSE G F+ P GIAV +++ + D N+RVQ F + L F
Sbjct: 268 QWGTKGSEAGQFSNPFGIAVDSADNVYITDVYNNRVQKFTSAGTFITQWGSQGLEVGQFN 327
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P G AV ++ V D N RVQ F ++GTF+ ++GS G+ GQ P+ IAV + + V
Sbjct: 328 MPYGDAVDSAGNVYVTDLGNSRVQKFTANGTFITEWGSSGSGDGQFNMPYGIAVDSADNV 387
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
V+D NN+RVQ F+ S G+++ ++G G+ GQ + P +AV V V+D
Sbjct: 388 YVADLNNNRVQKFN-------STGSYLTQWGMTGSGNGQFDQPCGVAVDRFGIVYVTDFG 440
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
N+RVQ+F G ++ +GS G GQ P G+A+D G + + D GNNR+Q FT G +
Sbjct: 441 NNRVQMFTSAGGYLSQWGSHGPGAGQFSGPNGIALDSTGNVYITDWGNNRVQKFTSTGSY 500
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
LR +G GS DG F VAV + N+ V D NHRIQ F
Sbjct: 501 LRQWGSSGSEDGMFGDSTSVAVDRDSNVYVSDSSNHRIQKF 541
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/287 (35%), Positives = 159/287 (55%), Gaps = 25/287 (8%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
+ GS G E G F P G+ + + V D+ N+ +Q FD +N FL
Sbjct: 34 QWGSSGQEAGQFNQPYGVTIDSIGDVYVVDTYNNWIQ----KFD--SNGTFLKKWGSFGT 87
Query: 97 ----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
F P IAV + VAD +N+R+Q F S G ++ ++G+ G++ GQL+ P +AV
Sbjct: 88 GDGQFNIPYDIAVDSVGYVYVADMNNNRIQKFNSTGGYLTQWGTKGSEEGQLDQPGSVAV 147
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
+ ++ V+D N+RVQ VF S G ++ ++GS G+ GQ + P+ IA+ +T V
Sbjct: 148 DSRGQIYVADWGNNRVQ-------VFNSTGGYLMQWGSSGSGDGQFDGPNGIAIDSTGNV 200
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V+D+ N+R+Q F+ G + +GS GSE GQ + P+G+A+D + V DSG NR+Q F
Sbjct: 201 YVTDAYNNRIQEFNSTGGYLMQWGSSGSEAGQFEIPQGIAMDSNDNVYVADSG-NRVQKF 259
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
T G F+ +G GS G+F G+AV S N+ + D N+R+Q F
Sbjct: 260 TSAGTFITQWGTKGSEAGQFSNPFGIAVDSADNVYITDVYNNRVQKF 306
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 118/190 (62%), Gaps = 7/190 (3%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+V ++GS G +AGQ P+ + + + V V D+ N+ +Q FD S+GTF+ K+G
Sbjct: 31 YVTQWGSSGQEAGQFNQPYGVTIDSIGDVYVVDTYNNWIQKFD-------SNGTFLKKWG 83
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
S G GQ P+ IAV + V V+D NN+R+Q F+ G +T +G++GSEEGQL P
Sbjct: 84 SFGTGDGQFNIPYDIAVDSVGYVYVADMNNNRIQKFNSTGGYLTQWGTKGSEEGQLDQPG 143
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
VAVD +G I V D GNNR+Q+F G +L +G GSGDG+F G G+A+ S GN+ V
Sbjct: 144 SVAVDSRGQIYVADWGNNRVQVFNSTGGYLMQWGSSGSGDGQFDGPNGIAIDSTGNVYVT 203
Query: 310 DRENHRIQVF 319
D N+RIQ F
Sbjct: 204 DAYNNRIQEF 213
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 147/287 (51%), Gaps = 24/287 (8%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
+ GS+G E G F P G AV ++ V D N RVQ N F+
Sbjct: 315 QWGSQGLEVGQFNMPYGDAVDSAGNVYVTDLGNSRVQ------KFTANGTFITEWGSSGS 368
Query: 97 ----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
F P GIAV +++ VAD +N+RVQ F S G+++ ++G G+ GQ + P +AV
Sbjct: 369 GDGQFNMPYGIAVDSADNVYVADLNNNRVQKFNSTGSYLTQWGMTGSGNGQFDQPCGVAV 428
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
V V+D N+RVQ+F S G ++ ++GS G AGQ P+ IA+ +T V
Sbjct: 429 DRFGIVYVTDFGNNRVQMF-------TSAGGYLSQWGSHGPGAGQFSGPNGIALDSTGNV 481
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
++D N+RVQ F G + +GS GSE+G VAVD + V DS N+RIQ F
Sbjct: 482 YITDWGNNRVQKFTSTGSYLRQWGSSGSEDGMFGDSTSVAVDRDSNVYVSDSSNHRIQKF 541
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G F+ +G +G G+F G+ V GN+ V D ++R+ F
Sbjct: 542 DQNGTFITKWGSYGLEAGQFNSPFGITVDGAGNVYVTDVNSNRVLKF 588
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 143/277 (51%), Gaps = 19/277 (6%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FT 98
+ GS GS G F P GIAV +++ VAD +N+RVQ T F
Sbjct: 362 EWGSSGSGDGQFNMPYGIAVDSADNVYVADLNNNRVQKFNSTGSYLTQWGMTGSGNGQFD 421
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P G+AV + V D N+RVQ+F S G ++ ++GS G AGQ P+ IA+ +T V
Sbjct: 422 QPCGVAVDRFGIVYVTDFGNNRVQMFTSAGGYLSQWGSHGPGAGQFSGPNGIALDSTGNV 481
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
++D N+RVQ F S G+++ ++GS G++ G +AV + V VSDS+
Sbjct: 482 YITDWGNNRVQ-------KFTSTGSYLRQWGSSGSEDGMFGDSTSVAVDRDSNVYVSDSS 534
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
NHR+Q FD NG IT +GS G E GQ P G+ VD G + V D +NR+ F P G
Sbjct: 535 NHRIQKFDQNGTFITKWGSYGLEAGQFNSPFGITVDGAGNVYVTDVNSNRVLKFAPTGTT 594
Query: 279 LRAFGCWGSG-------DGEFKGLEGVAVMSNGNILV 308
GS DG ++ ++G V+ G++++
Sbjct: 595 PVVIVPGGSAVPQDLNHDGLYEDVDGNGVLDFGDVVL 631
>gi|302527048|ref|ZP_07279390.1| predicted protein [Streptomyces sp. AA4]
gi|302435943|gb|EFL07759.1| predicted protein [Streptomyces sp. AA4]
Length = 641
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/349 (34%), Positives = 169/349 (48%), Gaps = 62/349 (17%)
Query: 31 PRSQ---YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC----- 82
PR Q + + +F G G++ G P G+A + I+VAD N+RVQ+
Sbjct: 197 PRGQVKVFDRDGEFRFSFGPLGADAGELKSPIGVATDSQDRIIVADQGNNRVQIFDSSGA 256
Query: 83 -FPHF-DLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNK 140
HF L T L WP G+AV D+ I+VAD+ N+RVQVF S G ++ +FGS+G
Sbjct: 257 HVAHFGTLGTGDGEL--NWPFGVAVNADDEIIVADAGNNRVQVFDSSGRYLRQFGSLGLG 314
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR------------------------ 176
G+L +P ++AV N ++V+DS N RVQ+F +GR
Sbjct: 315 DGELNYPFHVAVDRENNIVVADSGNDRVQVFRPDGRYAAKFGVVRKRTVHAFGESDFNFP 374
Query: 177 ----------------------VFQSDGTFVGKFGSMGNKAGQ---LEHPHYIAVSNTNR 211
V DG V FG +G+ GQ L P +AV +R
Sbjct: 375 IGLAQDSKGNVLVSDTRNHRVLVLSPDGDLVRAFGELGSARGQFHFLTIPTSLAVDAQDR 434
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
+ V D N RVQ+F +G FG G EG P G+AVD G I VGD GN+ +Q+
Sbjct: 435 IHVVDPGNQRVQVFSPDGEFQFEFGGLGRGEGTFNTPSGIAVDSAGRILVGDGGNSVVQV 494
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLE-GVAVMSNGNILVCDRENHRIQVF 319
F G+FL FG G G+G+F G + GVAV+ + D NHR+Q+F
Sbjct: 495 FDSAGEFLFQFGENGDGEGQFNGFQIGVAVLEGDRVAAVDGRNHRVQIF 543
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 166/326 (50%), Gaps = 43/326 (13%)
Query: 24 IGQVGTTPRSQYLQKRRLQFKIGSRGSEPG----CFTWPRGIAVGPDNSIVVADSSNHRV 79
I G T +L+ R+ G RG G + +P AV D ++V D H +
Sbjct: 86 IANPGPTQAPLWLETRQRTEDGGFRGDADGRGGAEWRYPIDSAVDADGRVLVLDG--HVI 143
Query: 80 QVCFPHFDLKTN--CVFLAFTW-------PRGIAVGPDNSIVVADSSNH----------- 119
++ F + N F W P GIA N IVV D++
Sbjct: 144 KI----FGIDGNHLSTFGGSGWEEQDFISPCGIATDSRNRIVVTDNAGANPHVKPERPRG 199
Query: 120 RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ 179
+V+VF DG F FG +G AG+L+ P +A + +R+IV+D N+RVQIFD
Sbjct: 200 QVKVFDRDGEFRFSFGPLGADAGELKSPIGVATDSQDRIIVADQGNNRVQIFD------- 252
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
S G V FG++G G+L P +AV+ + +IV+D+ N+RVQ+FD +GR + FGS G
Sbjct: 253 SSGAHVAHFGTLGTGDGELNWPFGVAVNADDEIIVADAGNNRVQVFDSSGRYLRQFGSLG 312
Query: 240 SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG------CWGSGDGEFK 293
+G+L +P VAVD + I V DSGN+R+Q+F PDG++ FG G+ +F
Sbjct: 313 LGDGELNYPFHVAVDRENNIVVADSGNDRVQVFRPDGRYAAKFGVVRKRTVHAFGESDFN 372
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+A S GN+LV D NHR+ V
Sbjct: 373 FPIGLAQDSKGNVLVSDTRNHRVLVL 398
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 158/340 (46%), Gaps = 56/340 (16%)
Query: 25 GQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIV--VADSSNHRVQVC 82
G + TT R +RR S PG F P+G+++ D ++V V + VQV
Sbjct: 17 GVLPTTKRQGIEMRRR---------SAPGEFRNPQGLSIDQDGNLVVIVGCTRPPHVQVF 67
Query: 83 FPHFDLKTNCVFLAF---------------------------------------TWPRGI 103
P + F +P
Sbjct: 68 RPGGERSAQAAPYTFRNNIANPGPTQAPLWLETRQRTEDGGFRGDADGRGGAEWRYPIDS 127
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 163
AV D ++V D H +++F DG + FG G + P IA + NR++V+D+
Sbjct: 128 AVDADGRVLVLDG--HVIKIFGIDGNHLSTFGGSGWEEQDFISPCGIATDSRNRIVVTDN 185
Query: 164 --NNHRVQIFDVNG--RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
N V+ G +VF DG F FG +G AG+L+ P +A + +R+IV+D N
Sbjct: 186 AGANPHVKPERPRGQVKVFDRDGEFRFSFGPLGADAGELKSPIGVATDSQDRIIVADQGN 245
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
+RVQIFD +G + FG+ G+ +G+L +P GVAV+ I V D+GNNR+Q+F G++L
Sbjct: 246 NRVQIFDSSGAHVAHFGTLGTGDGELNWPFGVAVNADDEIIVADAGNNRVQVFDSSGRYL 305
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
R FG G GDGE VAV NI+V D N R+QVF
Sbjct: 306 RQFGSLGLGDGELNYPFHVAVDRENNIVVADSGNDRVQVF 345
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/284 (35%), Positives = 134/284 (47%), Gaps = 39/284 (13%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL--------KTNCVFLAFTWPRGIAVG 106
F +P G+A +++V+D+ NHRV V P DL F T P +AV
Sbjct: 371 FNFPIGLAQDSKGNVLVSDTRNHRVLVLSPDGDLVRAFGELGSARGQFHFLTIPTSLAVD 430
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
+ I V D N RVQVF DG F +FG +G G P IAV + R++V D N
Sbjct: 431 AQDRIHVVDPGNQRVQVFSPDGEFQFEFGGLGRGEGTFNTPSGIAVDSAGRILVGDGGNS 490
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY-IAVSNTNRVIVSDSNNHRVQIF 225
VQ+FD S G F+ +FG G+ GQ +AV +RV D NHRVQIF
Sbjct: 491 VVQVFD-------SAGEFLFQFGENGDGEGQFNGFQIGVAVLEGDRVAAVDGRNHRVQIF 543
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY-ISVGDSGNNRIQIFTPDGQFLRAFGC 284
D G S G+EG EEG + P V+ D G +V D GN+R+QIF
Sbjct: 544 DARGVFERSIGTEGVEEGNFRMPGAVSADRAGASFAVTDPGNDRVQIFN----------- 592
Query: 285 WGSGDGEFKGLEGVAVMSNGNILVCDR---------ENHRIQVF 319
+ G+ +G+ V + G++L+ R N RIQVF
Sbjct: 593 --AASGDLEGVLAVTGQTCGDLLLDARAARILVSIPANDRIQVF 634
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 100/239 (41%), Gaps = 23/239 (9%)
Query: 46 GSRGSEPGCF---TWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-----AF 97
G GS G F T P +AV + I V D N RVQV P + + L F
Sbjct: 409 GELGSARGQFHFLTIPTSLAVDAQDRIHVVDPGNQRVQVFSPDGEFQFEFGGLGRGEGTF 468
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY-IAVSNTN 156
P GIAV I+V D N VQVF S G F+ +FG G+ GQ +AV +
Sbjct: 469 NTPSGIAVDSAGRILVGDGGNSVVQVFDSAGEFLFQFGENGDGEGQFNGFQIGVAVLEGD 528
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVS 215
RV D NHRVQIFD G F G+ G + G P ++ V+
Sbjct: 529 RVAAVDGRNHRVQIFDAR-------GVFERSIGTEGVEEGNFRMPGAVSADRAGASFAVT 581
Query: 216 DSNNHRVQIFD-VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
D N RVQIF+ +G + G G L A I V N+RIQ+F
Sbjct: 582 DPGNDRVQIFNAASGDLEGVLAVTGQTCGDLLLDARAA-----RILVSIPANDRIQVFA 635
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 81/199 (40%), Gaps = 26/199 (13%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT-- 98
QF+ G G G F P GIAV I+V D N VQV FD +F
Sbjct: 454 FQFEFGGLGRGEGTFNTPSGIAVDSAGRILVGDGGNSVVQV----FDSAGEFLFQFGENG 509
Query: 99 --------WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
+ G+AV + + D NHRVQ+F + G F G+ G + G P +
Sbjct: 510 DGEGQFNGFQIGVAVLEGDRVAAVDGRNHRVQIFDARGVFERSIGTEGVEEGNFRMPGAV 569
Query: 151 AVSNTN-RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
+ V+D N RVQIF+ + G G G G L + +
Sbjct: 570 SADRAGASFAVTDPGNDRVQIFNA------ASGDLEGVLAVTGQTCGDL-----LLDARA 618
Query: 210 NRVIVSDSNNHRVQIFDVN 228
R++VS N R+Q+F +N
Sbjct: 619 ARILVSIPANDRIQVFAMN 637
>gi|340374379|ref|XP_003385715.1| PREDICTED: tripartite motif-containing protein 71-like [Amphimedon
queenslandica]
Length = 671
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/280 (38%), Positives = 150/280 (53%), Gaps = 13/280 (4%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-----CFPHFDLKTNCVFLAFTWP 100
GS GS+PG P GI +I++ D SNHR+QV F H F P
Sbjct: 394 GSEGSKPGELCRPWGICADHKGNIIIGDRSNHRIQVFDSKGAFSHAFGSEGSHPGQFNRP 453
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVI 159
G+AV + IVVAD NHR+Q FQ +G + FGS G+ GQ+ +P+ +AV T+ R++
Sbjct: 454 AGVAVTKEGDIVVADKDNHRIQKFQLNGKLMHHFGSRGSNDGQMIYPYDVAVHQTDGRIV 513
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ NHR+ +F SDG+ +GKFG G G + P I ++N + VSD N
Sbjct: 514 VTDTGNHRILMF-------TSDGSLLGKFGYKGYLCGHFDSPRGIVMTNEGHIAVSDFNV 566
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
H + + + NG GS GS Q P+G+A+D + V D+ NNRI I +P GQ+L
Sbjct: 567 HHLLVIEPNGTQARILGSHGSGNAQFTRPQGIAIDHRDNFVVVDTKNNRIVIMSPCGQYL 626
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G G+F V V+ +G I V D N R+Q+F
Sbjct: 627 TKFGSGGRARGQFDRPTSVTVLPDGRIAVLDFGNSRVQIF 666
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 105/187 (56%), Gaps = 8/187 (4%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FGS G+K G+L P I + +I+ D +NHR+Q+FD S G F FGS G+
Sbjct: 393 FGSEGSKPGELCRPWGICADHKGNIIIGDRSNHRIQVFD-------SKGAFSHAFGSEGS 445
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
GQ P +AV+ ++V+D +NHR+Q F +NG+++ FGS GS +GQ+ +P VAV
Sbjct: 446 HPGQFNRPAGVAVTKEGDIVVADKDNHRIQKFQLNGKLMHHFGSRGSNDGQMIYPYDVAV 505
Query: 254 -DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRE 312
G I V D+GN+RI +FT DG L FG G G F G+ + + G+I V D
Sbjct: 506 HQTDGRIVVTDTGNHRILMFTSDGSLLGKFGYKGYLCGHFDSPRGIVMTNEGHIAVSDFN 565
Query: 313 NHRIQVF 319
H + V
Sbjct: 566 VHHLLVI 572
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 100/234 (42%), Gaps = 50/234 (21%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAV-GPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT 98
+L GSRGS G +P +AV D IVV D+ NHR
Sbjct: 482 KLMHHFGSRGSNDGQMIYPYDVAVHQTDGRIVVTDTGNHR-------------------- 521
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+ +F SDG+ +GKFG G G + P I ++N +
Sbjct: 522 ----------------------ILMFTSDGSLLGKFGYKGYLCGHFDSPRGIVMTNEGHI 559
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
VSD N H + + + N GT GS G+ Q P IA+ + + +V D+
Sbjct: 560 AVSDFNVHHLLVIEPN-------GTQARILGSHGSGNAQFTRPQGIAIDHRDNFVVVDTK 612
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
N+R+ I G+ +T FGS G GQ P V V G I+V D GN+R+QIF
Sbjct: 613 NNRIVIMSPCGQYLTKFGSGGRARGQFDRPTSVTVLPDGRIAVLDFGNSRVQIF 666
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC-----VFLAFTW 99
+GS GS FT P+GIA+ ++ VV D+ N+R+ + P T F
Sbjct: 582 LGSHGSGNAQFTRPQGIAIDHRDNFVVVDTKNNRIVIMSPCGQYLTKFGSGGRARGQFDR 641
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQS 126
P + V PD I V D N RVQ+FQ
Sbjct: 642 PTSVTVLPDGRIAVLDFGNSRVQIFQE 668
>gi|348575510|ref|XP_003473531.1| PREDICTED: tripartite motif-containing protein 71-like [Cavia
porcellus]
Length = 866
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 152/282 (53%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 592 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGSFHHKFGTLGSRPGQF 651
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 652 DRPAGVACDTSRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 711
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P +A + ++V+D
Sbjct: 712 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVTDF 764
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G
Sbjct: 765 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFEANGS 824
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+A+ G I+V D N+RI +F
Sbjct: 825 FLCKFGTQGSGFGQMDRPSGIAITPEGMIVVVDFGNNRILIF 866
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 119/203 (58%), Gaps = 13/203 (6%)
Query: 123 VFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
V +S ++VG FGS G+ G+L P ++V +IV+D +N+R+Q
Sbjct: 577 VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQ------- 629
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ G+F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 630 VFKPCGSFHHKFGTLGSRPGQFDRPAGVACDTSRRIVVADKDNHRIQIFTFEGQFLLKFG 689
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+ F
Sbjct: 690 EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPR 749
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GVA G+++V D NHR+ V
Sbjct: 750 GVAFNQEGHLVVTDFNNHRLLVI 772
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ AD S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 524 AVVLGPDGNLFGADVSD------QQNGTYVVSYRP------QLEGEHLVSVTMCNQHI-- 569
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R
Sbjct: 570 --ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNR 627
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL
Sbjct: 628 IQVFKPCGSFHHKFGTLGSRPGQFDRPAGVACDTSRRIVVADKDNHRIQIFTFEGQFLLK 687
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 688 FGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 725
>gi|425469489|ref|ZP_18848421.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9701]
gi|389880728|emb|CCI38582.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9701]
Length = 340
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/316 (38%), Positives = 169/316 (53%), Gaps = 34/316 (10%)
Query: 15 LLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADS 74
LL++ + +G + +F GS G+ G F P IAVG I VAD+
Sbjct: 21 LLKSFSLVTATAIGCISIATSATAADFKFAFGSSGAGDGQFNNPYSIAVGSGGKIYVADT 80
Query: 75 SNHRVQVCFPHFDLKTNCVFLA-----------FTWPRGIAVGPDNSIVVADSSNHRVQV 123
+N+R+QV FD +N FL+ F P G+AV +I VAD+ N RVQ+
Sbjct: 81 ANNRIQV----FD--SNGGFLSTFGSSGAGDGEFNSPVGVAVDGVGNIYVADTFNERVQI 134
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGT 183
F S G F G G L P+ IAV + + V+D+ N RVQ+FD S+G
Sbjct: 135 FNSSGVFQSTVG-----VGYLGFPYGIAVGSGGNIYVADTFNDRVQVFD-------SNGG 182
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
F+ FG G L P IAV ++ ++ V+D++N+ VQ+FD +G ++++FGS GS G
Sbjct: 183 FLSTFG-----VGNLSLPQGIAVGSSGKIYVADTDNNLVQVFDSSGTLLSTFGSSGSGNG 237
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
+ P GVAVD G I V D+ NNR+Q+F G F AFG G+G+G+F G+AV +
Sbjct: 238 EFFSPGGVAVDGVGNIYVADTNNNRVQVFNSGGVFQYAFGSSGTGNGQFNTPYGIAVGGD 297
Query: 304 GNILVCDRENHRIQVF 319
NI V D N RIQVF
Sbjct: 298 SNIYVADTFNDRIQVF 313
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-----CFPHFDLKTNCVFL 95
L GS GS G F P G+AV +I VAD++N+RVQV F + +
Sbjct: 225 LLSTFGSSGSGNGEFFSPGGVAVDGVGNIYVADTNNNRVQVFNSGGVFQYAFGSSGTGNG 284
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
F P GIAVG D++I VAD+ N R+QVF++
Sbjct: 285 QFNTPYGIAVGGDSNIYVADTFNDRIQVFKT 315
>gi|425444428|ref|ZP_18824479.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9443]
gi|389735830|emb|CCI00727.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9443]
Length = 358
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/316 (37%), Positives = 161/316 (50%), Gaps = 24/316 (7%)
Query: 15 LLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADS 74
LL++ + +G + F GS G G F++PRGIAV +I VAD+
Sbjct: 21 LLKSFSLGAATAIGCISIATSATAANFSFAFGSLGRGNGQFSFPRGIAVDSSGNIYVADT 80
Query: 75 SNHRVQVCFPHFDLKTNCVFLA-----------FTWPRGIAVGPDNSIVVADSSNHRVQV 123
N RVQV + VF + F GIA+ +I VAD+ N RVQV
Sbjct: 81 GNDRVQV------FNSGGVFQSAFGSSGRGNGQFIGHHGIAIDSSGNIYVADTGNTRVQV 134
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGT 183
F S G+F FG G Q +P IAV ++ + V+D+ N RVQ+F+ S G+
Sbjct: 135 FNSSGSFQFAFGGSGRGNDQFNNPRGIAVGSSGNIYVADAGNTRVQVFN-------SSGS 187
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
F FGS G GQ I + + + V+D+ N R+Q+F+ G ++FGS GS +G
Sbjct: 188 FQFAFGSFGTGNGQFNGLQAIVIDSGGNIYVADTGNDRIQVFNSGGVFQSAFGSTGSGDG 247
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
Q P G+AVD G I V D N+R+Q+F G F AFG +GSG+G F + V S
Sbjct: 248 QFDDPVGIAVDSGGNIYVADRDNHRVQVFNSGGVFQSAFGGFGSGNGLFAFPSAIIVGSG 307
Query: 304 GNILVCDRENHRIQVF 319
GNI V D N+R+QVF
Sbjct: 308 GNIYVMDASNNRVQVF 323
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 128/244 (52%), Gaps = 20/244 (8%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
Q GS G G F GIA+ +I VAD+ N RVQV F+ + F
Sbjct: 94 FQSAFGSSGRGNGQFIGHHGIAIDSSGNIYVADTGNTRVQV----FNSSGSFQFAFGGSG 149
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
F PRGIAVG +I VAD+ N RVQVF S G+F FGS G GQ I
Sbjct: 150 RGNDQFNNPRGIAVGSSGNIYVADAGNTRVQVFNSSGSFQFAFGSFGTGNGQFNGLQAIV 209
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
+ + + V+D+ N R+Q+F+ +G VFQS FGS G+ GQ + P IAV +
Sbjct: 210 IDSGGNIYVADTGNDRIQVFN-SGGVFQS------AFGSTGSGDGQFDDPVGIAVDSGGN 262
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
+ V+D +NHRVQ+F+ G ++FG GS G FP + V G I V D+ NNR+Q+
Sbjct: 263 IYVADRDNHRVQVFNSGGVFQSAFGGFGSGNGLFAFPSAIIVGSGGNIYVMDASNNRVQV 322
Query: 272 FTPD 275
F+ D
Sbjct: 323 FSQD 326
>gi|47229492|emb|CAF99480.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 153/279 (54%), Gaps = 12/279 (4%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWP 100
G G G P G+ V + +VVAD SN+R+Q+ P L F P
Sbjct: 244 GCEGEGDGQLCRPWGVCVDKEGYVVVADRSNNRIQIFKPCGAFHHKFGSLGSRPGQFDRP 303
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+A I+VAD NHRVQVF +G F+ KFG G K GQ +P +AV++ +++V
Sbjct: 304 AGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILV 363
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
SD+ NHRVQ+F DG+F+ K+G G + P +A ++ + ++V+D NNH
Sbjct: 364 SDTRNHRVQLF-------APDGSFLNKYGFEGALWKHFDSPRGVAFNHEDHLVVTDFNNH 416
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+ + + + GSEG+ GQ P+GVAVD + I V DS N+R+Q+F P+G FL
Sbjct: 417 RLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVADSRNHRVQVFEPNGNFLC 476
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GSG G+ GVAV +G I+V D N+RI F
Sbjct: 477 KFGAQGSGFGQMDRPSGVAVTPDGIIVVVDFGNNRILKF 515
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 128/234 (54%), Gaps = 12/234 (5%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-CFP-HFDLK---TNCVFLAFT 98
K GS GS PG F P G+A I+VAD NHRVQV F F LK F
Sbjct: 289 KFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFGEKGTKNGQFN 348
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P +AV + I+V+D+ NHRVQ+F DG+F+ K+G G + P +A ++ + +
Sbjct: 349 YPWDVAVNSEGKILVSDTRNHRVQLFAPDGSFLNKYGFEGALWKHFDSPRGVAFNHEDHL 408
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+V+D NNHR+ V + D GS G GQ P +AV NR+IV+DS
Sbjct: 409 VVTDFNNHRL-------LVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVADSR 461
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
NHRVQ+F+ NG + FG++GS GQ+ P GVAV G I V D GNNRI F
Sbjct: 462 NHRVQVFEPNGNFLCKFGAQGSGFGQMDRPSGVAVTPDGIIVVVDFGNNRILKF 515
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 112/196 (57%), Gaps = 7/196 (3%)
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGT 183
+ S G+ + FG G GQL P + V V+V+D +N+R+QIF + G
Sbjct: 233 YGSLGSQLSSFGCEGEGDGQLCRPWGVCVDKEGYVVVADRSNNRIQIF-------KPCGA 285
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
F KFGS+G++ GQ + P +A + R+IV+D +NHRVQ+F G+ + FG +G++ G
Sbjct: 286 FHHKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFGEKGTKNG 345
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
Q +P VAV+ +G I V D+ N+R+Q+F PDG FL +G G+ F GVA
Sbjct: 346 QFNYPWDVAVNSEGKILVSDTRNHRVQLFAPDGSFLNKYGFEGALWKHFDSPRGVAFNHE 405
Query: 304 GNILVCDRENHRIQVF 319
+++V D NHR+ V
Sbjct: 406 DHLVVTDFNNHRLLVI 421
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 110/213 (51%), Gaps = 16/213 (7%)
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
PD ++ A+ ++H+ +G++ + + E H ++V NR I
Sbjct: 178 PDGNLSSAEVTDHQ------NGSYTVSY------LPKCEGEHLVSVLVCNRHIQGSPFKV 225
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
V+ +GR + S G+ + FG G GQL P + V V+V+D +N+R+QIF
Sbjct: 226 TVK----SGRSYGSLGSQLSSFGCEGEGDGQLCRPWGVCVDKEGYVVVADRSNNRIQIFK 281
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
G FGS GS GQ P GVA D Q I V D N+R+Q+FT +GQFL FG G
Sbjct: 282 PCGAFHHKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFGEKG 341
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ +G+F VAV S G ILV D NHR+Q+F
Sbjct: 342 TKNGQFNYPWDVAVNSEGKILVSDTRNHRVQLF 374
>gi|410911172|ref|XP_003969064.1| PREDICTED: tripartite motif-containing protein 71-like [Takifugu
rubripes]
Length = 831
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 153/279 (54%), Gaps = 12/279 (4%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWP 100
G G G P G+ V + +VVAD SN+R+Q+ P L F P
Sbjct: 560 GCEGEGDGQLCRPWGVCVDREGYVVVADRSNNRIQIFKPCGAFHHKFGSLGSRPGQFDRP 619
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+A ++VAD NHRVQVF +G F+ KFG G K GQ +P +AV++ +++V
Sbjct: 620 AGVACDSQRRVIVADKDNHRVQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILV 679
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
SD+ NHRVQ+F DGTF+ K+G G + P +A ++ + ++V+D NNH
Sbjct: 680 SDTRNHRVQLFT-------PDGTFLNKYGFEGALWKHFDSPRGVAFNHEDHLVVTDFNNH 732
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+ + + + GSEG+ GQ P+GVAVD + I V DS N+R+Q+F P+G FL
Sbjct: 733 RLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVADSRNHRVQVFEPNGNFLC 792
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GSG G+ GVAV +G I+V D N+RI F
Sbjct: 793 KFGAQGSGYGQMDRPSGVAVTPDGIIVVVDFGNNRILKF 831
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 127/238 (53%), Gaps = 20/238 (8%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------- 95
K GS GS PG F P G+A ++VAD NHRVQV F + +
Sbjct: 605 KFGSLGSRPGQFDRPAGVACDSQRRVIVADKDNHRVQV----FTFEGQFLLKFGEKGTKN 660
Query: 96 -AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F +P +AV + I+V+D+ NHRVQ+F DGTF+ K+G G + P +A ++
Sbjct: 661 GQFNYPWDVAVNSEGKILVSDTRNHRVQLFTPDGTFLNKYGFEGALWKHFDSPRGVAFNH 720
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ ++V+D NNHR+ V + D GS G GQ P +AV NR+IV
Sbjct: 721 EDHLVVTDFNNHRL-------LVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIV 773
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+DS NHRVQ+F+ NG + FG++GS GQ+ P GVAV G I V D GNNRI F
Sbjct: 774 ADSRNHRVQVFEPNGNFLCKFGAQGSGYGQMDRPSGVAVTPDGIIVVVDFGNNRILKF 831
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 113/196 (57%), Gaps = 7/196 (3%)
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGT 183
+ S G+ V FG G GQL P + V V+V+D +N+R+QIF + G
Sbjct: 549 YSSLGSKVSAFGCEGEGDGQLCRPWGVCVDREGYVVVADRSNNRIQIF-------KPCGA 601
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
F KFGS+G++ GQ + P +A + RVIV+D +NHRVQ+F G+ + FG +G++ G
Sbjct: 602 FHHKFGSLGSRPGQFDRPAGVACDSQRRVIVADKDNHRVQVFTFEGQFLLKFGEKGTKNG 661
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
Q +P VAV+ +G I V D+ N+R+Q+FTPDG FL +G G+ F GVA
Sbjct: 662 QFNYPWDVAVNSEGKILVSDTRNHRVQLFTPDGTFLNKYGFEGALWKHFDSPRGVAFNHE 721
Query: 304 GNILVCDRENHRIQVF 319
+++V D NHR+ V
Sbjct: 722 DHLVVTDFNNHRLLVI 737
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 111/213 (52%), Gaps = 16/213 (7%)
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
PD S+ A+ ++H+ +G++ G + G+ H ++V N+ I
Sbjct: 494 PDGSLSAAEVTDHQ------NGSYT--VGYLPKCEGE----HLVSVLVCNQHIQGSPFKV 541
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
V+ +GR + S G+ V FG G GQL P + V V+V+D +N+R+QIF
Sbjct: 542 TVK----SGRSYSSLGSKVSAFGCEGEGDGQLCRPWGVCVDREGYVVVADRSNNRIQIFK 597
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
G FGS GS GQ P GVA D Q + V D N+R+Q+FT +GQFL FG G
Sbjct: 598 PCGAFHHKFGSLGSRPGQFDRPAGVACDSQRRVIVADKDNHRVQVFTFEGQFLLKFGEKG 657
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ +G+F VAV S G ILV D NHR+Q+F
Sbjct: 658 TKNGQFNYPWDVAVNSEGKILVSDTRNHRVQLF 690
>gi|397781344|ref|YP_006545817.1| Internalin-A [Methanoculleus bourgensis MS2]
gi|396939846|emb|CCJ37101.1| Internalin-A [Methanoculleus bourgensis MS2]
Length = 2759
Score = 182 bits (461), Expect = 3e-43, Method: Composition-based stats.
Identities = 98/223 (43%), Positives = 131/223 (58%), Gaps = 7/223 (3%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P+GIAV ++ VAD+ NHR+Q F S G + K+GS G+ GQ +P +AV
Sbjct: 95 FNGPQGIAVNAAGNVYVADTYNHRIQKFDSSGNLLTKWGSWGSGDGQFSYPDSVAVDAAG 154
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
V VSD+NN R+Q FD SDGTF+GK+GS G+ GQL + V + V++
Sbjct: 155 NVYVSDTNNGRIQKFD-------SDGTFLGKWGSWGSGDGQLRFSQDLVVDAAGNIYVAE 207
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
NHR+Q FD NG + GS GS +GQ P G+ VD G + V D+ N+RIQ F G
Sbjct: 208 YGNHRIQKFDSNGNFLWKKGSSGSGDGQFLSPYGITVDAAGNVYVADTWNHRIQKFDSSG 267
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL +G GSG+G+F GVAV S GN+ V +R N R+Q+F
Sbjct: 268 NFLTKWGSRGSGNGQFSEPFGVAVDSAGNVYVTERGNDRVQMF 310
Score = 165 bits (417), Expect = 3e-38, Method: Composition-based stats.
Identities = 95/240 (39%), Positives = 134/240 (55%), Gaps = 20/240 (8%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------- 95
K GS G+ G F P+GIAV ++ VAD+ NHR+Q FD N +
Sbjct: 84 KWGSYGTGNGQFNGPQGIAVNAAGNVYVADTYNHRIQ----KFDSSGNLLTKWGSWGSGD 139
Query: 96 -AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F++P +AV ++ V+D++N R+Q F SDGTF+GK+GS G+ GQL + V
Sbjct: 140 GQFSYPDSVAVDAAGNVYVSDTNNGRIQKFDSDGTFLGKWGSWGSGDGQLRFSQDLVVDA 199
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ V++ NHR+Q FD S+G F+ K GS G+ GQ P+ I V V V
Sbjct: 200 AGNIYVAEYGNHRIQKFD-------SNGNFLWKKGSSGSGDGQFLSPYGITVDAAGNVYV 252
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+D+ NHR+Q FD +G +T +GS GS GQ P GVAVD G + V + GN+R+Q+F P
Sbjct: 253 ADTWNHRIQKFDSSGNFLTKWGSRGSGNGQFSEPFGVAVDSAGNVYVTERGNDRVQMFAP 312
Score = 155 bits (391), Expect = 3e-35, Method: Composition-based stats.
Identities = 92/228 (40%), Positives = 125/228 (54%), Gaps = 11/228 (4%)
Query: 96 AFTWPRGIAVGPDNSIVVADS-SNH---RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
F P IA+ I + ++ +NH R+ S F+ K+GS G GQ P IA
Sbjct: 43 GFKDPFDIAIDTAGHIYITETDANHILQRILKLDSSMNFITKWGSYGTGNGQFNGPQGIA 102
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V+ V V+D+ NHR+Q FD S G + K+GS G+ GQ +P +AV
Sbjct: 103 VNAAGNVYVADTYNHRIQKFD-------SSGNLLTKWGSWGSGDGQFSYPDSVAVDAAGN 155
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
V VSD+NN R+Q FD +G + +GS GS +GQL+F + + VD G I V + GN+RIQ
Sbjct: 156 VYVSDTNNGRIQKFDSDGTFLGKWGSWGSGDGQLRFSQDLVVDAAGNIYVAEYGNHRIQK 215
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F +G FL G GSGDG+F G+ V + GN+ V D NHRIQ F
Sbjct: 216 FDSNGNFLWKKGSSGSGDGQFLSPYGITVDAAGNVYVADTWNHRIQKF 263
Score = 137 bits (344), Expect = 9e-30, Method: Composition-based stats.
Identities = 77/193 (39%), Positives = 111/193 (57%), Gaps = 10/193 (5%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN-NHRVQIFDVNGRVFQSDGT--FVG 186
FV K+G G G + P IA+ + +++++ NH +Q R+ + D + F+
Sbjct: 31 FVTKWGEYGTGEG-FKDPFDIAIDTAGHIYITETDANHILQ------RILKLDSSMNFIT 83
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
K+GS G GQ P IAV+ V V+D+ NHR+Q FD +G ++T +GS GS +GQ
Sbjct: 84 KWGSYGTGNGQFNGPQGIAVNAAGNVYVADTYNHRIQKFDSSGNLLTKWGSWGSGDGQFS 143
Query: 247 FPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNI 306
+P VAVD G + V D+ N RIQ F DG FL +G WGSGDG+ + + + V + GNI
Sbjct: 144 YPDSVAVDAAGNVYVSDTNNGRIQKFDSDGTFLGKWGSWGSGDGQLRFSQDLVVDAAGNI 203
Query: 307 LVCDRENHRIQVF 319
V + NHRIQ F
Sbjct: 204 YVAEYGNHRIQKF 216
Score = 47.0 bits (110), Expect = 0.012, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------ 96
+K GS GS G F P GI V ++ VAD+ NHR+Q FD N FL
Sbjct: 224 WKKGSSGSGDGQFLSPYGITVDAAGNVYVADTWNHRIQ----KFDSSGN--FLTKWGSRG 277
Query: 97 -----FTWPRGIAVGPDNSIVVADSSNHRVQVF 124
F+ P G+AV ++ V + N RVQ+F
Sbjct: 278 SGNGQFSEPFGVAVDSAGNVYVTERGNDRVQMF 310
>gi|449492780|ref|XP_002196047.2| PREDICTED: E3 ubiquitin-protein ligase TRIM71-like [Taeniopygia
guttata]
Length = 566
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 152/282 (53%), Gaps = 12/282 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G+++ + I+VAD SN+R+QV P L F
Sbjct: 292 LSFGSEGDSDGKLCRPWGVSIDKEGFIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQF 351
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV+ +
Sbjct: 352 DRPAGVACDISRRIVVADKDNHRIQIFTFEGQFILKFGEKGAKNGQFNYPWDVAVNAEGK 411
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++VSD+ NHR+Q+F DG F+ K+G G + P + ++ ++V+D
Sbjct: 412 ILVSDTRNHRIQLFG-------PDGVFLNKYGFEGVLWKHFDSPRGVTFNHEGHLVVTDF 464
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+QIF +G
Sbjct: 465 NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGS 524
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG G+ G+AV +G I+V D N+RI VF
Sbjct: 525 FLCKFGTQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF 566
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 114/218 (52%), Gaps = 16/218 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ +GPD ++ AD S+ Q +GT++ + QLE H ++V N+ I
Sbjct: 224 AVVMGPDGNLFGADVSD------QQNGTYLVSYRP------QLEGEHLVSVMMCNQHI-- 269
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
N ++ +GR + G FGS G+ G+L P +++ +IV+D +N+R
Sbjct: 270 --ENSPFKVMVKSGRSYIGIGLPGLSFGSEGDSDGKLCRPWGVSIDKEGFIIVADRSNNR 327
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQF+
Sbjct: 328 IQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDISRRIVVADKDNHRIQIFTFEGQFILK 387
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+ +G+F VAV + G ILV D NHRIQ+F
Sbjct: 388 FGEKGAKNGQFNYPWDVAVNAEGKILVSDTRNHRIQLF 425
>gi|326674663|ref|XP_690252.5| PREDICTED: tripartite motif-containing protein 71 [Danio rerio]
gi|425936244|sp|E7FAM5.1|LIN41_DANRE RecName: Full=E3 ubiquitin-protein ligase TRIM71; AltName:
Full=Protein lin-41 homolog; AltName: Full=Tripartite
motif-containing protein 71
Length = 824
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 135/220 (61%), Gaps = 7/220 (3%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GI V + +VVAD SN+RVQ+F+ GTF KFG++G++ GQ + P +A + R+I
Sbjct: 565 PWGICVDKEGYVVVADRSNNRVQIFKPCGTFHHKFGTLGSRPGQFDRPAGVACDSQRRII 624
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+QIF DG F+ KFG G K GQ +P +AV+ +++VSD+ N
Sbjct: 625 VADKDNHRIQIFTF-------DGQFLLKFGEKGTKNGQFNYPWDVAVNFEGKILVSDTRN 677
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HRVQ+F +G + +G EG+ PRGVA + +G++ V D N+R+ + PD Q
Sbjct: 678 HRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVTDFNNHRLLVIRPDCQSA 737
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
R G G+G+G+F +GVAV I+V D NHRIQVF
Sbjct: 738 RFLGSEGTGNGQFLRPQGVAVDQEDRIIVADSRNHRIQVF 777
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 150/279 (53%), Gaps = 12/279 (4%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWP 100
G G G P GI V + +VVAD SN+RVQ+ P L F P
Sbjct: 553 GGEGDGDGQLCRPWGICVDKEGYVVVADRSNNRVQIFKPCGTFHHKFGTLGSRPGQFDRP 612
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+A I+VAD NHR+Q+F DG F+ KFG G K GQ +P +AV+ +++V
Sbjct: 613 AGVACDSQRRIIVADKDNHRIQIFTFDGQFLLKFGEKGTKNGQFNYPWDVAVNFEGKILV 672
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
SD+ NHRVQ+F DGTF+ K+G G + P +A + ++V+D NNH
Sbjct: 673 SDTRNHRVQLFG-------PDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVTDFNNH 725
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+ + + + GSEG+ GQ P+GVAVD + I V DS N+RIQ+F P+G FL
Sbjct: 726 RLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQEDRIIVADSRNHRIQVFEPNGNFLC 785
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+G G+ G+AV +G I+ D N+RI +F
Sbjct: 786 KFGTHGNGFGQMDRPSGIAVTPDGVIVAVDFGNNRILMF 824
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 125/236 (52%), Gaps = 16/236 (6%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
K G+ GS PG F P G+A I+VAD NHR+Q+ FD + F
Sbjct: 598 KFGTLGSRPGQFDRPAGVACDSQRRIIVADKDNHRIQIFT--FDGQFLLKFGEKGTKNGQ 655
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F +P +AV + I+V+D+ NHRVQ+F DGTF+ K+G G + P +A +
Sbjct: 656 FNYPWDVAVNFEGKILVSDTRNHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFNQEG 715
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++V+D NNHR+ V + D GS G GQ P +AV +R+IV+D
Sbjct: 716 HLVVTDFNNHRL-------LVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQEDRIIVAD 768
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
S NHR+Q+F+ NG + FG+ G+ GQ+ P G+AV G I D GNNRI +F
Sbjct: 769 SRNHRIQVFEPNGNFLCKFGTHGNGFGQMDRPSGIAVTPDGVIVAVDFGNNRILMF 824
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 113/192 (58%), Gaps = 7/192 (3%)
Query: 128 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK 187
G + FG G+ GQL P I V V+V+D +N+RVQIF + GTF K
Sbjct: 546 GLPMASFGGEGDGDGQLCRPWGICVDKEGYVVVADRSNNRVQIF-------KPCGTFHHK 598
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG++G++ GQ + P +A + R+IV+D +NHR+QIF +G+ + FG +G++ GQ +
Sbjct: 599 FGTLGSRPGQFDRPAGVACDSQRRIIVADKDNHRIQIFTFDGQFLLKFGEKGTKNGQFNY 658
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P VAV+ +G I V D+ N+R+Q+F PDG FL +G G+ F GVA G+++
Sbjct: 659 PWDVAVNFEGKILVSDTRNHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLV 718
Query: 308 VCDRENHRIQVF 319
V D NHR+ V
Sbjct: 719 VTDFNNHRLLVI 730
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 110/217 (50%), Gaps = 16/217 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ + PD ++ A+ S+H+ DGT+ + G E H ++V N+ I
Sbjct: 483 VLMSPDGNLSSAEVSDHQ------DGTYTVSYLPKG------EGEHLLSVLICNQHI--- 527
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
++ +GR + G + FG G+ GQL P I V V+V+D +N+RV
Sbjct: 528 -EGSPFKVMVKSGRSYGGVGLPMASFGGEGDGDGQLCRPWGICVDKEGYVVVADRSNNRV 586
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
QIF G FG+ GS GQ P GVA D Q I V D N+RIQIFT DGQFL F
Sbjct: 587 QIFKPCGTFHHKFGTLGSRPGQFDRPAGVACDSQRRIIVADKDNHRIQIFTFDGQFLLKF 646
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ +G+F VAV G ILV D NHR+Q+F
Sbjct: 647 GEKGTKNGQFNYPWDVAVNFEGKILVSDTRNHRVQLF 683
>gi|374629919|ref|ZP_09702304.1| PKD domain containing protein [Methanoplanus limicola DSM 2279]
gi|373908032|gb|EHQ36136.1| PKD domain containing protein [Methanoplanus limicola DSM 2279]
Length = 1907
Score = 180 bits (457), Expect = 7e-43, Method: Composition-based stats.
Identities = 112/283 (39%), Positives = 150/283 (53%), Gaps = 15/283 (5%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTW 99
IG RG+ G F P G+A ++I V D N+RVQ P L F
Sbjct: 626 IGERGTGEGQFMLPTGVAADSGDNIYVVDLFNNRVQKFNPDRTFAAMWGSLGTGDGQFNI 685
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
GIA PD++I VAD +N RVQ F S+G+F+ K+GS G GQ + + IA +
Sbjct: 686 TTGIAADPDDNIYVADMANSRVQKFDSNGSFIRKWGSEGTGDGQFKSLYGIASDKDGNIY 745
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN- 218
V+D N RVQ FD SDG F+ K+GS+G + +P I V + V V+DS
Sbjct: 746 VTDIGNVRVQKFD-------SDGNFIRKWGSLGINDTEFLNPTAITVDDNGDVYVTDSQA 798
Query: 219 --NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ V+ F +G IT +G G+ G+ P G+A D G I V D N R+QIFTPDG
Sbjct: 799 DQTNYVKKFTSDGVFITKWGGTGTSNGKFNAPAGIASDSAGNIFVSDKDNRRVQIFTPDG 858
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG GEF+G G+A S ++ V D NHR+++F
Sbjct: 859 GFLAKFGHNGSGPGEFQGSSGLAFNSENDLYVADVLNHRVEIF 901
Score = 95.1 bits (235), Expect = 4e-17, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF--------- 94
K GS G+ G F GIA D +I V D N RVQ FD N +
Sbjct: 719 KWGSEGTGDGQFKSLYGIASDKDGNIYVTDIGNVRVQ----KFDSDGNFIRKWGSLGIND 774
Query: 95 LAFTWPRGIAVGPDNSIVVADS---SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
F P I V + + V DS + V+ F SDG F+ K+G G G+ P IA
Sbjct: 775 TEFLNPTAITVDDNGDVYVTDSQADQTNYVKKFTSDGVFITKWGGTGTSNGKFNAPAGIA 834
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
+ + VSD +N RVQI F DG F+ KFG G+ G+ + +A ++ N
Sbjct: 835 SDSAGNIFVSDKDNRRVQI-------FTPDGGFLAKFGHNGSGPGEFQGSSGLAFNSEND 887
Query: 212 VIVSDSNNHRVQIFDVNG 229
+ V+D NHRV+IF NG
Sbjct: 888 LYVADVLNHRVEIFSPNG 905
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 17/97 (17%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
K G G+ G F P GIA +I V+D N RVQ+ P + FLA
Sbjct: 816 KWGGTGTSNGKFNAPAGIASDSAGNIFVSDKDNRRVQIFTP------DGGFLAKFGHNGS 869
Query: 97 ----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGT 129
F G+A +N + VAD NHRV++F +GT
Sbjct: 870 GPGEFQGSSGLAFNSENDLYVADVLNHRVEIFSPNGT 906
>gi|148657095|ref|YP_001277300.1| PA14 domain-containing protein [Roseiflexus sp. RS-1]
gi|148569205|gb|ABQ91350.1| PA14 domain protein [Roseiflexus sp. RS-1]
Length = 1293
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 159/291 (54%), Gaps = 31/291 (10%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--------- 96
GSRGS+ G F+ P G AV D ++ VADS+NHR+Q + FL
Sbjct: 319 GSRGSDQGQFSSPSGAAVASDGTVYVADSNNHRIQ------RFSADGTFLGAWGAEGSGD 372
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F +PR +AV D ++ VADS+NHR+Q F + GTF+GK+GS G+ GQ +P +AV+
Sbjct: 373 GQFVYPRSVAVASDGTVYVADSNNHRIQRFSATGTFLGKWGSEGSSDGQFIYPLNVAVAL 432
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE-HPHYIAVSNTNRVI 213
V V+D +Q F + G F+G +GS AG L +P +AV++ V
Sbjct: 433 DGTVYVADVAKGSIQ-------RFSATGAFIGTWGSQ-EGAGNLHFYPAGLAVASNGVVY 484
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
V+++N R++ F G + ++GS G +GQL PRG+AV G I V D+GN RIQ F+
Sbjct: 485 VANANKSRIERFSATGTFLDAWGSLGINDGQLWSPRGIAVAPDGTIYVADTGNGRIQHFS 544
Query: 274 PDGQFLRAFGCWGSGDGE-----FKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL ++ W D + + E VAV +G + V D NHRIQVF
Sbjct: 545 ATGIFLGSWDSWSIFDRQLLQSPLESPEDVAVAPDGKVYVVDNGNHRIQVF 595
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 154/286 (53%), Gaps = 31/286 (10%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------- 96
+G+ G PG + +AV PDN++ VADS NHR++ FL
Sbjct: 184 LGAWGWRPG-----KRVAVVPDNTVYVADSDNHRIR------RFSAIGAFLGEWGSRGSG 232
Query: 97 ---FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F P +AV PD ++ VAD NHR+Q F +DGTF+G +GS G+ GQ + V+
Sbjct: 233 EGQFNTPSDVAVAPDGTVYVADYWNHRIQRFSADGTFLGAWGSSGSGNGQFVGHLSVEVA 292
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
N V V+DS R+Q F + GTF+G +GS G+ GQ P AV++ V
Sbjct: 293 PNNTVYVADS--FRIQ-------RFSATGTFLGAWGSRGSDQGQFSSPSGAAVASDGTVY 343
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
V+DSNNHR+Q F +G + ++G+EGS +GQ +PR VAV G + V DS N+RIQ F+
Sbjct: 344 VADSNNHRIQRFSADGTFLGAWGAEGSGDGQFVYPRSVAVASDGTVYVADSNNHRIQRFS 403
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL +G GS DG+F VAV +G + V D IQ F
Sbjct: 404 ATGTFLGKWGSEGSSDGQFIYPLNVAVALDGTVYVADVAKGSIQRF 449
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 178/388 (45%), Gaps = 88/388 (22%)
Query: 15 LLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADS 74
L TL+ S G+ ++Q R QF +G++ + G F P G+AV PD ++ VADS
Sbjct: 20 LAVTLVTSSAGEAALAQQTQ--PYRVFQFAVGAQ-APVGQFNNPSGVAVAPDGTVYVADS 76
Query: 75 SNHRVQVCFPHFDL-----KTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGT 129
NHR+Q +L F+ PR +AV PD ++ VAD+ NHR+Q F + GT
Sbjct: 77 DNHRIQRFSAAGELLGAWGSPGTGDGQFSSPRSVAVAPDGTVYVADTGNHRIQRFSAIGT 136
Query: 130 FVGKFGSMGNKA-GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG------------- 175
F+G +GS G GQ +P +AV++ V V D +HR+Q F G
Sbjct: 137 FLGTWGSAGLLIDGQFWYPSDVAVTSDGTVYVVD--DHRIQRFSATGVFLGAWGWRPGKR 194
Query: 176 -------------------RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
R F + G F+G++GS G+ GQ P +AV+ V V+D
Sbjct: 195 VAVVPDNTVYVADSDNHRIRRFSAIGAFLGEWGSRGSGEGQFNTPSDVAVAPDGTVYVAD 254
Query: 217 SNNHRVQIFDVN---------------------------------------------GRV 231
NHR+Q F + G
Sbjct: 255 YWNHRIQRFSADGTFLGAWGSSGSGNGQFVGHLSVEVAPNNTVYVADSFRIQRFSATGTF 314
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ ++GS GS++GQ P G AV G + V DS N+RIQ F+ DG FL A+G GSGDG+
Sbjct: 315 LGAWGSRGSDQGQFSSPSGAAVASDGTVYVADSNNHRIQRFSADGTFLGAWGAEGSGDGQ 374
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F VAV S+G + V D NHRIQ F
Sbjct: 375 FVYPRSVAVASDGTVYVADSNNHRIQRF 402
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 160/326 (49%), Gaps = 57/326 (17%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP------------------- 84
+ GSRGS G F P +AV PD ++ VAD NHR+Q
Sbjct: 225 EWGSRGSGEGQFNTPSDVAVAPDGTVYVADYWNHRIQRFSADGTFLGAWGSSGSGNGQFV 284
Query: 85 -HFDLKT---NCVFLA---------------------------FTWPRGIAVGPDNSIVV 113
H ++ N V++A F+ P G AV D ++ V
Sbjct: 285 GHLSVEVAPNNTVYVADSFRIQRFSATGTFLGAWGSRGSDQGQFSSPSGAAVASDGTVYV 344
Query: 114 ADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 173
ADS+NHR+Q F +DGTF+G +G+ G+ GQ +P +AV++ V V+DSNNHR+Q
Sbjct: 345 ADSNNHRIQRFSADGTFLGAWGAEGSGDGQFVYPRSVAVASDGTVYVADSNNHRIQ---- 400
Query: 174 NGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT 233
F + GTF+GK+GS G+ GQ +P +AV+ V V+D +Q F G I
Sbjct: 401 ---RFSATGTFLGKWGSEGSSDGQFIYPLNVAVALDGTVYVADVAKGSIQRFSATGAFIG 457
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
++GS+ +P G+AV G + V ++ +RI+ F+ G FL A+G G DG+
Sbjct: 458 TWGSQEGAGNLHFYPAGLAVASNGVVYVANANKSRIERFSATGTFLDAWGSLGINDGQLW 517
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+AV +G I V D N RIQ F
Sbjct: 518 SPRGIAVAPDGTIYVADTGNGRIQHF 543
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 31/199 (15%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW---- 99
K GS GS G F +P +AV D ++ VAD + +Q F+ TW
Sbjct: 411 KWGSEGSSDGQFIYPLNVAVALDGTVYVADVAKGSIQ------RFSATGAFIG-TWGSQE 463
Query: 100 --------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + + VA+++ R++ F + GTF+ +GS+G GQL P IA
Sbjct: 464 GAGNLHFYPAGLAVASNGVVYVANANKSRIERFSATGTFLDAWGSLGINDGQLWSPRGIA 523
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ-----LEHPHYIAV 206
V+ + V+D+ N R+Q F + G F+G + S Q LE P +AV
Sbjct: 524 VAPDGTIYVADTGNGRIQH-------FSATGIFLGSWDSWSIFDRQLLQSPLESPEDVAV 576
Query: 207 SNTNRVIVSDSNNHRVQIF 225
+ +V V D+ NHR+Q+F
Sbjct: 577 APDGKVYVVDNGNHRIQVF 595
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 24/99 (24%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW------ 99
GS G G PRGIAV PD +I VAD+ N R+Q HF +FL +W
Sbjct: 507 GSLGINDGQLWSPRGIAVAPDGTIYVADTGNGRIQ----HF--SATGIFLG-SWDSWSIF 559
Query: 100 -----------PRGIAVGPDNSIVVADSSNHRVQVFQSD 127
P +AV PD + V D+ NHR+QVF +D
Sbjct: 560 DRQLLQSPLESPEDVAVAPDGKVYVVDNGNHRIQVFGTD 598
>gi|156402828|ref|XP_001639792.1| predicted protein [Nematostella vectensis]
gi|156226922|gb|EDO47729.1| predicted protein [Nematostella vectensis]
Length = 747
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 103/278 (37%), Positives = 152/278 (54%), Gaps = 31/278 (11%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------AFTWPRGIAVGPD 108
P G+A P +VV D NHR+Q+ +D + + +P G+AV
Sbjct: 485 PWGVATDPYGQLVVTDHHNHRIQI----YDSEGKMMRQFGIRGKGDGEIWYPAGVAVDKS 540
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
+I VAD N+R+Q F +G F+ KFG G GQ++ P AV NRV+V+D +NHR+
Sbjct: 541 GNIFVADHGNNRIQAFTQEGEFIRKFGGKGTGLGQMKGPCGAAVDGENRVLVADRDNHRI 600
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
Q+FD S+G F+ FGS G+ G+ P +I+VS+ ++VSD+ N RVQ+FD
Sbjct: 601 QVFD-------SEGNFLFTFGSYGDSQGKFNCPRHISVSSKGEILVSDAGNFRVQVFDGA 653
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G ++ FG +GS GQ P GVA D +G+I V D N +Q+F DG+F++ S
Sbjct: 654 GNFLSKFGEKGSNNGQFSCPAGVATDAEGHIVVADLKNLNVQVFNSDGEFIKRI----SQ 709
Query: 289 DGE-------FKGLEGVAVMSNGNILVCDRENHRIQVF 319
D + F GVA+ NGN++V DR H++ +F
Sbjct: 710 DPDSVKNASYFGKPTGVAISDNGNVVVADRGLHKVMLF 747
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 123/250 (49%), Gaps = 23/250 (9%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV- 93
Y + ++ + G RG G +P G+AV +I VAD N+R+Q F + +
Sbjct: 509 YDSEGKMMRQFGIRGKGDGEIWYPAGVAVDKSGNIFVADHGNNRIQA----FTQEGEFIR 564
Query: 94 --------FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE 145
P G AV +N ++VAD NHR+QVF S+G F+ FGS G+ G+
Sbjct: 565 KFGGKGTGLGQMKGPCGAAVDGENRVLVADRDNHRIQVFDSEGNFLFTFGSYGDSQGKFN 624
Query: 146 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
P +I+VS+ ++VSD+ N RVQ+FD G F+ KFG G+ GQ P +A
Sbjct: 625 CPRHISVSSKGEILVSDAGNFRVQVFD-------GAGNFLSKFGEKGSNNGQFSCPAGVA 677
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF---PRGVAVDDQGYISVG 262
++V+D N VQ+F+ +G I + + P GVA+ D G + V
Sbjct: 678 TDAEGHIVVADLKNLNVQVFNSDGEFIKRISQDPDSVKNASYFGKPTGVAISDNGNVVVA 737
Query: 263 DSGNNRIQIF 272
D G +++ +F
Sbjct: 738 DRGLHKVMLF 747
>gi|156349182|ref|XP_001621951.1| hypothetical protein NEMVEDRAFT_v1g143095 [Nematostella vectensis]
gi|156208317|gb|EDO29851.1| predicted protein [Nematostella vectensis]
Length = 583
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 155/288 (53%), Gaps = 22/288 (7%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------- 95
GS G G P G+ + SI+VAD SN+R+Q+ FD N V
Sbjct: 307 LSFGSEGESGGQLCRPWGVCCDRNGSIIVADRSNNRIQI----FDNYGNFVHKFGSAGSR 362
Query: 96 --AFTWPRGIAVGPD-NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
F P G+ + + I+VAD NHRVQVF DGTF+ KFG G+K GQ +P +AV
Sbjct: 363 NGQFDRPAGVTCDHERDRIIVADKDNHRVQVFSLDGTFLLKFGEKGSKNGQFSYPWDVAV 422
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG-SMGNKAGQLEHPHYIAVSNTNR 211
++ ++VSD+ NHRVQ+F DG F+ K+G G + P +A ++ R
Sbjct: 423 NSEGNILVSDTRNHRVQLF-------TCDGQFLNKYGFEQGIHWKCFDSPRGVAFAHDGR 475
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
+IV+D NNHR+ + + + G+EGS Q P+GV VD +G I V DS N+RIQI
Sbjct: 476 MIVTDFNNHRLLVISGDCKSAQWLGTEGSGLTQFVRPQGVCVDQEGNIVVADSRNHRIQI 535
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F P+G FL FG G G+ G+ V +G I+V D N+RIQVF
Sbjct: 536 FQPNGNFLCKFGSHGGALGQLDRPSGICVSPDGLIVVVDFGNNRIQVF 583
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 112/198 (56%), Gaps = 17/198 (8%)
Query: 128 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK 187
G + FGS G GQL P + +IV+D +N+R+QIFD + G FV K
Sbjct: 303 GPVLLSFGSEGESGGQLCRPWGVCCDRNGSIIVADRSNNRIQIFD-------NYGNFVHK 355
Query: 188 FGSMGNKAGQLEHPHYIAVSNT-NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
FGS G++ GQ + P + + +R+IV+D +NHRVQ+F ++G + FG +GS+ GQ
Sbjct: 356 FGSAGSRNGQFDRPAGVTCDHERDRIIVADKDNHRVQVFSLDGTFLLKFGEKGSKNGQFS 415
Query: 247 FPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGC-----WGSGDGEFKGLEGVAVM 301
+P VAV+ +G I V D+ N+R+Q+FT DGQFL +G W F GVA
Sbjct: 416 YPWDVAVNSEGNILVSDTRNHRVQLFTCDGQFLNKYGFEQGIHWKC----FDSPRGVAFA 471
Query: 302 SNGNILVCDRENHRIQVF 319
+G ++V D NHR+ V
Sbjct: 472 HDGRMIVTDFNNHRLLVI 489
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 97/178 (54%), Gaps = 5/178 (2%)
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
Q+E H I+V+ + I + RV I GR + G + FGS G GQL P
Sbjct: 268 QVEGEHVISVTIRGQHI--QDSPFRVAI--KKGRNYNGVGPVLLSFGSEGESGGQLCRPW 323
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD-DQGYISV 261
+ +IV+D +N+R+QIFD G + FGS GS GQ P GV D ++ I V
Sbjct: 324 GVCCDRNGSIIVADRSNNRIQIFDNYGNFVHKFGSAGSRNGQFDRPAGVTCDHERDRIIV 383
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D N+R+Q+F+ DG FL FG GS +G+F VAV S GNILV D NHR+Q+F
Sbjct: 384 ADKDNHRVQVFSLDGTFLLKFGEKGSKNGQFSYPWDVAVNSEGNILVSDTRNHRVQLF 441
>gi|198438213|ref|XP_002129130.1| PREDICTED: similar to tripartite motif-containing 71 [Ciona
intestinalis]
Length = 758
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 156/284 (54%), Gaps = 15/284 (5%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-----CFPHFDLKTNCVFLAF 97
G GS+ G P GI ++VAD SN+R+Q+ F H + F
Sbjct: 483 LTFGKEGSKDGELCRPWGICCDSQGHLIVADRSNNRLQIFNYDGSFHHKFGTSGSRPGQF 542
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+ V IVVAD NHR+Q+F DGTFVG FG G+K+GQ +P +AV++
Sbjct: 543 DRPAGVTVNKQGQIVVADKDNHRIQIFCFDGTFVGMFGERGSKSGQFNYPWDVAVNSVGM 602
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
+ V+D+ NHR+Q+F DGTF+ K+G G + P +A S+ +R+IV+D
Sbjct: 603 IAVTDTRNHRIQLF-------SPDGTFLHKYGFEGALWKHFDSPRGVAFSH-DRIIVTDF 654
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NNHR+ I + + + GSEG++ Q P+GVA+D++G I V DS N+RIQ+FTP G
Sbjct: 655 NNHRLVIIEPDLQSARYLGSEGNQALQFLRPQGVAIDEEGNIVVADSRNHRIQVFTPTGG 714
Query: 278 FLRAFGCWGSGDGE--FKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ FG + +G GV V +G+I V D N+R+ VF
Sbjct: 715 LIAVFGGASTTNGSALMDRPSGVTVTPHGHIAVVDFGNNRVIVF 758
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 138/260 (53%), Gaps = 19/260 (7%)
Query: 65 PDNSIV---VADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAV--GPDNSIVVADSSNH 119
PD+S V DS R + CFP + W RG+ V P N +V N
Sbjct: 417 PDSSTFRADVLDSGEGRYRFCFPAVQEGK---YSVSAWCRGLPVCDSPFNLLV---KRNI 470
Query: 120 RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ 179
+ GT V FG G+K G+L P I + +IV+D +N+R+QIF+
Sbjct: 471 NYSSRAAAGTPVLTFGKEGSKDGELCRPWGICCDSQGHLIVADRSNNRLQIFNY------ 524
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
DG+F KFG+ G++ GQ + P + V+ +++V+D +NHR+QIF +G + FG G
Sbjct: 525 -DGSFHHKFGTSGSRPGQFDRPAGVTVNKQGQIVVADKDNHRIQIFCFDGTFVGMFGERG 583
Query: 240 SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVA 299
S+ GQ +P VAV+ G I+V D+ N+RIQ+F+PDG FL +G G+ F GVA
Sbjct: 584 SKSGQFNYPWDVAVNSVGMIAVTDTRNHRIQLFSPDGTFLHKYGFEGALWKHFDSPRGVA 643
Query: 300 VMSNGNILVCDRENHRIQVF 319
S+ I+V D NHR+ +
Sbjct: 644 -FSHDRIIVTDFNNHRLVII 662
>gi|423072880|ref|ZP_17061629.1| repeat protein [Desulfitobacterium hafniense DP7]
gi|361856375|gb|EHL08282.1| repeat protein [Desulfitobacterium hafniense DP7]
Length = 2017
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 154/287 (53%), Gaps = 21/287 (7%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-------- 94
+ GS GS G F P+ +AV D +I VAD++N R+Q FD +
Sbjct: 764 MEFGSTGSGDGQFRNPKSVAVDNDGNIYVADTTNKRIQ----KFDSDGTLITKWGDSQDN 819
Query: 95 --LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
F+ IAV + I V DS++ R+Q F SDG +VG FG + G P + V
Sbjct: 820 GDYQFSLISDIAVDNNGHIYVVDSNDPRLQKFTSDGVYVGAFGGSDSTGGPFNLPLGVTV 879
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
+ ++D+ NHR+Q + ++G F+ K+GS G Q P +A ++ V
Sbjct: 880 DQDGNIYIADTLNHRIQ-------KYSAEGEFLTKWGSNGVGNVQFGAPQDVATDSSGNV 932
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V D++N R+Q FD +G +T +GS GS+EG+ P G+AVD G I V DS N+RIQ F
Sbjct: 933 YVVDTSNKRIQKFDSSGSFLTKWGSNGSDEGEFNRPYGIAVDSDGNIYVADSNNHRIQKF 992
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G F+ +G +G+G G+F +G+AV SNGN+ V D EN R+Q F
Sbjct: 993 NAAGVFITTWGSYGTGLGQFNSPKGIAVDSNGNVYVADIENDRVQKF 1039
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 152/286 (53%), Gaps = 24/286 (8%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW---- 99
K GS GS+ G F P GIAV D +I VADS+NHR+Q VF+ TW
Sbjct: 954 KWGSNGSDEGEFNRPYGIAVDSDGNIYVADSNNHRIQ------KFNAAGVFIT-TWGSYG 1006
Query: 100 --------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P+GIAV + ++ VAD N RVQ F S G FGS G G+ + P +A
Sbjct: 1007 TGLGQFNSPKGIAVDSNGNVYVADIENDRVQKFDSMGGNPEAFGSTGTGEGEFKRPSGVA 1066
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V + V ++ NHR+Q FD FQ + G S GN GQ P +AV ++
Sbjct: 1067 VDGDGNIYVVEALNHRMQKFD---STFQPQYIWGGT--SYGNGNGQFNSPSGVAVDSSGN 1121
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
+ V D+NN+RVQ FD NG + +GS G+ + Q FP G+AVD G + V D+ N I++
Sbjct: 1122 IYVLDNNNNRVQKFDANGEFVLKWGSLGAGDSQFFFPHGIAVDSAGNVYVADTSANWIRM 1181
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
F+ G L +G G+ G+F G+AV ++GNI V D N+R+Q
Sbjct: 1182 FSSTGTLLAKWGTRGNSAGQFDNPSGIAVDNDGNIYVADTNNNRVQ 1227
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 153/276 (55%), Gaps = 24/276 (8%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----------FTWPRGI 103
F+ IAV + I V DS++ R+Q ++ V++ F P G+
Sbjct: 824 FSLISDIAVDNNGHIYVVDSNDPRLQ------KFTSDGVYVGAFGGSDSTGGPFNLPLGV 877
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 163
V D +I +AD+ NHR+Q + ++G F+ K+GS G Q P +A ++ V V D+
Sbjct: 878 TVDQDGNIYIADTLNHRIQKYSAEGEFLTKWGSNGVGNVQFGAPQDVATDSSGNVYVVDT 937
Query: 164 NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
+N R+Q FD S G+F+ K+GS G+ G+ P+ IAV + + V+DSNNHR+Q
Sbjct: 938 SNKRIQKFD-------SSGSFLTKWGSNGSDEGEFNRPYGIAVDSDGNIYVADSNNHRIQ 990
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
F+ G IT++GS G+ GQ P+G+AVD G + V D N+R+Q F G AFG
Sbjct: 991 KFNAAGVFITTWGSYGTGLGQFNSPKGIAVDSNGNVYVADIENDRVQKFDSMGGNPEAFG 1050
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+G+GEFK GVAV +GNI V + NHR+Q F
Sbjct: 1051 STGTGEGEFKRPSGVAVDGDGNIYVVEALNHRMQKF 1086
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 147/322 (45%), Gaps = 60/322 (18%)
Query: 51 EPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW----------- 99
E F P AV + +I + DS+ H ++ L + LA TW
Sbjct: 678 EQWFFDVPAAAAVDSNGNIYIVDSNRHHIK------KLSSTGEILA-TWGSYGNAEGQLN 730
Query: 100 -PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P IA+ DN++ VAD+ N+R+Q F S G ++ +FGS G+ GQ +P +AV N +
Sbjct: 731 VPGHIAIDSDNNVYVADTGNNRIQKFSSTGGYLMEFGSTGSGDGQFRNPKSVAVDNDGNI 790
Query: 159 IVSDSNNHRVQIFDVNGRV----------------------------------------- 177
V+D+ N R+Q FD +G +
Sbjct: 791 YVADTTNKRIQKFDSDGTLITKWGDSQDNGDYQFSLISDIAVDNNGHIYVVDSNDPRLQK 850
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS 237
F SDG +VG FG + G P + V + ++D+ NHR+Q + G +T +GS
Sbjct: 851 FTSDGVYVGAFGGSDSTGGPFNLPLGVTVDQDGNIYIADTLNHRIQKYSAEGEFLTKWGS 910
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
G Q P+ VA D G + V D+ N RIQ F G FL +G GS +GEF G
Sbjct: 911 NGVGNVQFGAPQDVATDSSGNVYVVDTSNKRIQKFDSSGSFLTKWGSNGSDEGEFNRPYG 970
Query: 298 VAVMSNGNILVCDRENHRIQVF 319
+AV S+GNI V D NHRIQ F
Sbjct: 971 IAVDSDGNIYVADSNNHRIQKF 992
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 154/328 (46%), Gaps = 61/328 (18%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT----NCV-FLAFTWP 100
G S G F P G+ V D +I +AD+ NHR+Q + T N V + F P
Sbjct: 862 GGSDSTGGPFNLPLGVTVDQDGNIYIADTLNHRIQKYSAEGEFLTKWGSNGVGNVQFGAP 921
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
+ +A ++ V D+SN R+Q F S G+F+ K+GS G+ G+ P+ IAV + + V
Sbjct: 922 QDVATDSSGNVYVVDTSNKRIQKFDSSGSFLTKWGSNGSDEGEFNRPYGIAVDSDGNIYV 981
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+DSNNHR+Q F+ + G F+ +GS G GQ P IAV + V V+D N
Sbjct: 982 ADSNNHRIQKFN-------AAGVFITTWGSYGTGLGQFNSPKGIAVDSNGNVYVADIEND 1034
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLK---------------------------------- 246
RVQ FD G +FGS G+ EG+ K
Sbjct: 1035 RVQKFDSMGGNPEAFGSTGTGEGEFKRPSGVAVDGDGNIYVVEALNHRMQKFDSTFQPQY 1094
Query: 247 ---------------FPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
P GVAVD G I V D+ NNR+Q F +G+F+ +G G+GD +
Sbjct: 1095 IWGGTSYGNGNGQFNSPSGVAVDSSGNIYVLDNNNNRVQKFDANGEFVLKWGSLGAGDSQ 1154
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G+AV S GN+ V D + I++F
Sbjct: 1155 FFFPHGIAVDSAGNVYVADTSANWIRMF 1182
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 123/229 (53%), Gaps = 14/229 (6%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F PR IAV +I V+DS N+R+Q F S GTF+ K+G G+ G+ P+ +AV +
Sbjct: 271 FATPRSIAVDSAGNIYVSDSMNNRIQKFASSGTFLKKWGRGGSADGEFYQPYGVAVDHEG 330
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ VSD+ N+R++ FD + G FV +G+ G+ QL P I V + V V+D
Sbjct: 331 TIYVSDTGNNRIEKFD-------AAGVFVTSWGN-GSDEDQLNMPMGIVVDSAGNVYVAD 382
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
N+R+Q +D G + + S + L P G+AVD + V + N+R+Q F+P G
Sbjct: 383 MGNNRIQKYDSAGGYLGTIESSEESDFSLNMPMGLAVDGSDNLYVTELMNHRVQKFSPAG 442
Query: 277 QFLRAFGCW------GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L G G+G GEF GVAV S+GNI V D +N R+Q F
Sbjct: 443 SSLGTLGGAESGTDPGTGPGEFIAPGGVAVDSSGNIYVLDTQNSRVQKF 491
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 130/265 (49%), Gaps = 8/265 (3%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVA 114
F+ P IAV ++ V DS ++ D +G+ V ++
Sbjct: 182 FSQPTDIAVDLHGNVYVVDSGTGQIVELTSEGDFLMTLGGGQLIESQGVTVDSMGNVYAI 241
Query: 115 DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 174
D+S +++ F G+F+ +G G GQ P IAV + + VSDS N+R+Q
Sbjct: 242 DASTRQIEKFDGAGSFIMGWGGAGIDDGQFATPRSIAVDSAGNIYVSDSMNNRIQ----- 296
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
F S GTF+ K+G G+ G+ P+ +AV + + VSD+ N+R++ FD G +TS
Sbjct: 297 --KFASSGTFLKKWGRGGSADGEFYQPYGVAVDHEGTIYVSDTGNNRIEKFDAAGVFVTS 354
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
+G+ GS+E QL P G+ VD G + V D GNNRIQ + G +L D
Sbjct: 355 WGN-GSDEDQLNMPMGIVVDSAGNVYVADMGNNRIQKYDSAGGYLGTIESSEESDFSLNM 413
Query: 295 LEGVAVMSNGNILVCDRENHRIQVF 319
G+AV + N+ V + NHR+Q F
Sbjct: 414 PMGLAVDGSDNLYVTELMNHRVQKF 438
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 144/293 (49%), Gaps = 33/293 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--------- 96
G G + G F PR IAV +I V+DS N+R+Q ++ FL
Sbjct: 262 GGAGIDDGQFATPRSIAVDSAGNIYVSDSMNNRIQ------KFASSGTFLKKWGRGGSAD 315
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F P G+AV + +I V+D+ N+R++ F + G FV +G+ G+ QL P I V +
Sbjct: 316 GEFYQPYGVAVDHEGTIYVSDTGNNRIEKFDAAGVFVTSWGN-GSDEDQLNMPMGIVVDS 374
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
V V+D N+R+Q +D S G ++G S L P +AV ++ + V
Sbjct: 375 AGNVYVADMGNNRIQKYD-------SAGGYLGTIESSEESDFSLNMPMGLAVDGSDNLYV 427
Query: 215 SDSNNHRVQIFDVNGRVITSFG------SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
++ NHRVQ F G + + G G+ G+ P GVAVD G I V D+ N+R
Sbjct: 428 TELMNHRVQKFSPAGSSLGTLGGAESGTDPGTGPGEFIAPGGVAVDSSGNIYVLDTQNSR 487
Query: 269 IQIFTPDG--QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+Q F+ F +G +G + +F+ G+AV S GN+ V D N+RIQ F
Sbjct: 488 VQKFSEFNIESFDLEWGSFGGANDQFRYPNGIAVDSAGNVYVSDSGNYRIQKF 540
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 144/292 (49%), Gaps = 31/292 (10%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW---- 99
K G GS G F P G+AV + +I V+D+ N+R++ FD VF+ +W
Sbjct: 307 KWGRGGSADGEFYQPYGVAVDHEGTIYVSDTGNNRIE----KFDAA--GVFVT-SWGNGS 359
Query: 100 -------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
P GI V ++ VAD N+R+Q + S G ++G S L P +AV
Sbjct: 360 DEDQLNMPMGIVVDSAGNVYVADMGNNRIQKYDSAGGYLGTIESSEESDFSLNMPMGLAV 419
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM--GNKAGQLEHPHYIAVSNTN 210
++ + V++ NHRVQ F G S GT G G G+ P +AV ++
Sbjct: 420 DGSDNLYVTELMNHRVQKFSPAG---SSLGTLGGAESGTDPGTGPGEFIAPGGVAVDSSG 476
Query: 211 RVIVSDSNNHRVQIF-DVNGRVITSF----GSEGSEEGQLKFPRGVAVDDQGYISVGDSG 265
+ V D+ N RVQ F + N I SF GS G Q ++P G+AVD G + V DSG
Sbjct: 477 NIYVLDTQNSRVQKFSEFN---IESFDLEWGSFGGANDQFRYPNGIAVDSAGNVYVSDSG 533
Query: 266 NNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
N RIQ F+ G+ + +G G DG+F G+ + S+ NI V D N+R+Q
Sbjct: 534 NYRIQKFSSTGKSIEKWGSPGVADGQFLMPGGITLDSSNNIYVVDSGNNRVQ 585
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 133/281 (47%), Gaps = 20/281 (7%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP-------HFDLKTNCVFLAFT 98
G G E G IAV D ++ VADS N+RVQ +L+++
Sbjct: 78 GILGEENGQINELADIAVDGDGNVYVADSGNNRVQKFMLIEDYHSFQMNLESDGNGEYPM 137
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P G+AV D +I V+ +++RV+ F S G V + S + Q P IAV V
Sbjct: 138 SPSGVAVDSDGNIYVSYMNDNRVEKFNSSGQVVTDWWSQASGY-QFSQPTDIAVDLHGNV 196
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
V DS QI ++ S+G F+ G GQL + V + V D++
Sbjct: 197 YVVDSGTG--QIVELT-----SEGDFLMTLG-----GGQLIESQGVTVDSMGNVYAIDAS 244
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
+++ FD G I +G G ++GQ PR +AVD G I V DS NNRIQ F G F
Sbjct: 245 TRQIEKFDGAGSFIMGWGGAGIDDGQFATPRSIAVDSAGNIYVSDSMNNRIQKFASSGTF 304
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L+ +G GS DGEF GVAV G I V D N+RI+ F
Sbjct: 305 LKKWGRGGSADGEFYQPYGVAVDHEGTIYVSDTGNNRIEKF 345
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 133/266 (50%), Gaps = 17/266 (6%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA----FTWPRGIAVGPDNSIVV 113
P G+AV D +I V+ +++RV+ + T+ A F+ P IAV ++ V
Sbjct: 139 PSGVAVDSDGNIYVSYMNDNRVEKFNSSGQVVTDWWSQASGYQFSQPTDIAVDLHGNVYV 198
Query: 114 ADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 173
DS ++ S+G F+ G GQL + V + V D++ +++ FD
Sbjct: 199 VDSGTGQIVELTSEGDFLMTLG-----GGQLIESQGVTVDSMGNVYAIDASTRQIEKFD- 252
Query: 174 NGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT 233
G+F+ +G G GQ P IAV + + VSDS N+R+Q F +G +
Sbjct: 253 ------GAGSFIMGWGGAGIDDGQFATPRSIAVDSAGNIYVSDSMNNRIQKFASSGTFLK 306
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+G GS +G+ P GVAVD +G I V D+GNNRI+ F G F+ ++G GS + +
Sbjct: 307 KWGRGGSADGEFYQPYGVAVDHEGTIYVSDTGNNRIEKFDAAGVFVTSWGN-GSDEDQLN 365
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ V S GN+ V D N+RIQ +
Sbjct: 366 MPMGIVVDSAGNVYVADMGNNRIQKY 391
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 128/310 (41%), Gaps = 53/310 (17%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC------FPHFDLKTNCVFLAFTWPRG 102
GS+ P GI V ++ VAD N+R+Q + F + P G
Sbjct: 358 GSDEDQLNMPMGIVVDSAGNVYVADMGNNRIQKYDSAGGYLGTIESSEESDF-SLNMPMG 416
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM------GNKAGQLEHPHYIAVSNTN 156
+AV +++ V + NHRVQ F G+ +G G G G+ P +AV ++
Sbjct: 417 LAVDGSDNLYVTELMNHRVQKFSPAGSSLGTLGGAESGTDPGTGPGEFIAPGGVAVDSSG 476
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ V D+ N RVQ F F + +F ++GS G Q +P+ IAV + V VSD
Sbjct: 477 NIYVLDTQNSRVQKF----SEFNIE-SFDLEWGSFGGANDQFRYPNGIAVDSAGNVYVSD 531
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ------ 270
S N+R+Q F G+ I +GS G +GQ P G+ +D I V DSGNNR+Q
Sbjct: 532 SGNYRIQKFSSTGKSIEKWGSPGVADGQFLMPGGITLDSSNNIYVVDSGNNRVQKLGATA 591
Query: 271 -----------------------------IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVM 301
+ TP + F W +G F A
Sbjct: 592 PAGYTVTFDSNGGSLVAAISNVTANTTVDLPTPPTKAGYTFAGWYKDNGVFGNGFTAATP 651
Query: 302 SNGNILVCDR 311
GNI+V +
Sbjct: 652 VTGNIIVYAK 661
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 107/227 (47%), Gaps = 15/227 (6%)
Query: 97 FTWPRGIAVGPDNSIVV----ADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
F P +AV +I V +D + ++V G + +G +G + GQ+ IAV
Sbjct: 36 FDTPNAVAVDGSGNIYVGTYASDENPYQVTRLSPAGVILDSWGILGEENGQINELADIAV 95
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
V V+DS N+RVQ F + + +F S GN + P +AV + +
Sbjct: 96 DGDGNVYVADSGNNRVQKF----MLIEDYHSFQMNLESDGNGEYPMS-PSGVAVDSDGNI 150
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
VS N++RV+ F+ +G+V+T + S+ S Q P +AVD G + V DSG +I
Sbjct: 151 YVSYMNDNRVEKFNSSGQVVTDWWSQASGY-QFSQPTDIAVDLHGNVYVVDSGTGQIVEL 209
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
T +G FL G G+ +GV V S GN+ D +I+ F
Sbjct: 210 TSEGDFLMTLGG-----GQLIESQGVTVDSMGNVYAIDASTRQIEKF 251
>gi|91087111|ref|XP_975133.1| PREDICTED: similar to abnormal cell LINeage LIN-41 [Tribolium
castaneum]
Length = 635
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 148/287 (51%), Gaps = 26/287 (9%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------- 95
G E G P G+ I+V D SN+R+QV FD +N FL
Sbjct: 362 AKEGVEDGQLCRPWGVCCNSLGHIIVTDRSNNRIQV----FD--SNGKFLYKFGKQGSGL 415
Query: 96 -AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F P GI V P N IVVAD NHR+Q+F+ DGTF+ FG G + GQ +P +A ++
Sbjct: 416 GQFERPAGITVSPVNHIVVADKDNHRIQIFKMDGTFILTFGEKGTQNGQFNYPWDVACNS 475
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ--LEHPHYIAVSNTNRV 212
++VSD+ NHR+Q+F G F+ K+G GN + + P + + V
Sbjct: 476 QGDIVVSDTRNHRIQLF-------TGAGAFINKYGFEGNSSMWKFFDCPRGVCFTPAGNV 528
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+V+D NNHR+ I D + G EGS++ Q P+G+ DDQG I V DS N+RIQ+F
Sbjct: 529 MVTDFNNHRIVIIDKDFVRAQFLGEEGSKDKQFLRPQGIICDDQGNIVVADSKNHRIQVF 588
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G G G GEF G+ + G I+V D N R+QVF
Sbjct: 589 DSFGNFLFQLGRPGKGPGEFDRPSGLCLSPTGRIIVVDFANARVQVF 635
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
F G + GQL P + ++ +IV+D +N+R+Q+FD NG+ F+ KFG G+
Sbjct: 361 FAKEGVEDGQLCRPWGVCCNSLGHIIVTDRSNNRIQVFDSNGK-------FLYKFGKQGS 413
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
GQ E P I VS N ++V+D +NHR+QIF ++G I +FG +G++ GQ +P VA
Sbjct: 414 GLGQFERPAGITVSPVNHIVVADKDNHRIQIFKMDGTFILTFGEKGTQNGQFNYPWDVAC 473
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD--GEFKGLEGVAVMSNGNILVCDR 311
+ QG I V D+ N+RIQ+FT G F+ +G G+ F GV GN++V D
Sbjct: 474 NSQGDIVVSDTRNHRIQLFTGAGAFINKYGFEGNSSMWKFFDCPRGVCFTPAGNVMVTDF 533
Query: 312 ENHRIQVF 319
NHRI +
Sbjct: 534 NNHRIVII 541
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 116/246 (47%), Gaps = 26/246 (10%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--- 96
+ +K G +GS G F P GI V P N IVVAD NHR+Q+ K + F+
Sbjct: 403 KFLYKFGKQGSGLGQFERPAGITVSPVNHIVVADKDNHRIQI------FKMDGTFILTFG 456
Query: 97 --------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ--LEH 146
F +P +A IVV+D+ NHR+Q+F G F+ K+G GN + +
Sbjct: 457 EKGTQNGQFNYPWDVACNSQGDIVVSDTRNHRIQLFTGAGAFINKYGFEGNSSMWKFFDC 516
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
P + + V+V+D NNHR+ I D D G G+K Q P I
Sbjct: 517 PRGVCFTPAGNVMVTDFNNHRIVIID-------KDFVRAQFLGEEGSKDKQFLRPQGIIC 569
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
+ ++V+DS NHR+Q+FD G + G G G+ P G+ + G I V D N
Sbjct: 570 DDQGNIVVADSKNHRIQVFDSFGNFLFQLGRPGKGPGEFDRPSGLCLSPTGRIIVVDFAN 629
Query: 267 NRIQIF 272
R+Q+F
Sbjct: 630 ARVQVF 635
>gi|270009596|gb|EFA06044.1| hypothetical protein TcasGA2_TC008876 [Tribolium castaneum]
Length = 616
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 148/287 (51%), Gaps = 26/287 (9%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------- 95
G E G P G+ I+V D SN+R+QV FD +N FL
Sbjct: 343 AKEGVEDGQLCRPWGVCCNSLGHIIVTDRSNNRIQV----FD--SNGKFLYKFGKQGSGL 396
Query: 96 -AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F P GI V P N IVVAD NHR+Q+F+ DGTF+ FG G + GQ +P +A ++
Sbjct: 397 GQFERPAGITVSPVNHIVVADKDNHRIQIFKMDGTFILTFGEKGTQNGQFNYPWDVACNS 456
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ--LEHPHYIAVSNTNRV 212
++VSD+ NHR+Q+F G F+ K+G GN + + P + + V
Sbjct: 457 QGDIVVSDTRNHRIQLF-------TGAGAFINKYGFEGNSSMWKFFDCPRGVCFTPAGNV 509
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+V+D NNHR+ I D + G EGS++ Q P+G+ DDQG I V DS N+RIQ+F
Sbjct: 510 MVTDFNNHRIVIIDKDFVRAQFLGEEGSKDKQFLRPQGIICDDQGNIVVADSKNHRIQVF 569
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G G G GEF G+ + G I+V D N R+QVF
Sbjct: 570 DSFGNFLFQLGRPGKGPGEFDRPSGLCLSPTGRIIVVDFANARVQVF 616
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
F G + GQL P + ++ +IV+D +N+R+Q+FD NG+ F+ KFG G+
Sbjct: 342 FAKEGVEDGQLCRPWGVCCNSLGHIIVTDRSNNRIQVFDSNGK-------FLYKFGKQGS 394
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
GQ E P I VS N ++V+D +NHR+QIF ++G I +FG +G++ GQ +P VA
Sbjct: 395 GLGQFERPAGITVSPVNHIVVADKDNHRIQIFKMDGTFILTFGEKGTQNGQFNYPWDVAC 454
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD--GEFKGLEGVAVMSNGNILVCDR 311
+ QG I V D+ N+RIQ+FT G F+ +G G+ F GV GN++V D
Sbjct: 455 NSQGDIVVSDTRNHRIQLFTGAGAFINKYGFEGNSSMWKFFDCPRGVCFTPAGNVMVTDF 514
Query: 312 ENHRIQVF 319
NHRI +
Sbjct: 515 NNHRIVII 522
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 116/246 (47%), Gaps = 26/246 (10%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--- 96
+ +K G +GS G F P GI V P N IVVAD NHR+Q+ K + F+
Sbjct: 384 KFLYKFGKQGSGLGQFERPAGITVSPVNHIVVADKDNHRIQI------FKMDGTFILTFG 437
Query: 97 --------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ--LEH 146
F +P +A IVV+D+ NHR+Q+F G F+ K+G GN + +
Sbjct: 438 EKGTQNGQFNYPWDVACNSQGDIVVSDTRNHRIQLFTGAGAFINKYGFEGNSSMWKFFDC 497
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
P + + V+V+D NNHR+ I D D G G+K Q P I
Sbjct: 498 PRGVCFTPAGNVMVTDFNNHRIVIID-------KDFVRAQFLGEEGSKDKQFLRPQGIIC 550
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
+ ++V+DS NHR+Q+FD G + G G G+ P G+ + G I V D N
Sbjct: 551 DDQGNIVVADSKNHRIQVFDSFGNFLFQLGRPGKGPGEFDRPSGLCLSPTGRIIVVDFAN 610
Query: 267 NRIQIF 272
R+Q+F
Sbjct: 611 ARVQVF 616
>gi|196003538|ref|XP_002111636.1| hypothetical protein TRIADDRAFT_23736 [Trichoplax adhaerens]
gi|190585535|gb|EDV25603.1| hypothetical protein TRIADDRAFT_23736 [Trichoplax adhaerens]
Length = 689
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 155/296 (52%), Gaps = 14/296 (4%)
Query: 29 TTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL 88
TT Q + +L F G E P + +N+I + D+ N RVQ+ P L
Sbjct: 403 TTRNFQGISTAKLSFSRRGDGWEQ--LQRPNDVICDHENNIFITDTGNDRVQIFQPDGQL 460
Query: 89 -----KTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
+ F P + + D +++V+D++N+RVQVF G F+ GS G + G+
Sbjct: 461 VHSFGSSGSNPGQFESPSCLTLDIDGNVIVSDTNNNRVQVFTRKGIFIKSLGSGGTEPGE 520
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
PH I + R+ V DS NHR+Q VF SDG ++ FG+ G+ GQL P
Sbjct: 521 FHDPHGITIDKDGRIFVVDSGNHRIQ-------VFSSDGEYLYHFGAKGDNPGQLGLPWG 573
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
IA+ ++ ++++D NHR+Q+FD NG+ FGS G++ G+L P G+ V G I V D
Sbjct: 574 IAIDHSGNILITDYKNHRIQVFDRNGKYRYLFGSRGNDTGRLNNPTGITVAPGGQIMVAD 633
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
N+ +QIF PDG L FG G G+ K GV V ++ N++V D N RIQVF
Sbjct: 634 RSNHAVQIFAPDGMPLHRFGSKGGTVGQLKFPAGVCVDNSNNVIVADTFNCRIQVF 689
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 11/206 (5%)
Query: 115 DSSNHRVQVFQS-DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 173
DS+N R ++ + DGT+ + + + PH + ++ I +I +
Sbjct: 353 DSNNKRTEIIDNRDGTYAIVYSTW------ISGPHLLNITVNGAPIAGSP----FKIKSI 402
Query: 174 NGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT 233
R FQ T F G+ QL+ P+ + + N + ++D+ N RVQIF +G+++
Sbjct: 403 TTRNFQGISTAKLSFSRRGDGWEQLQRPNDVICDHENNIFITDTGNDRVQIFQPDGQLVH 462
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
SFGS GS GQ + P + +D G + V D+ NNR+Q+FT G F+++ G G+ GEF
Sbjct: 463 SFGSSGSNPGQFESPSCLTLDIDGNVIVSDTNNNRVQVFTRKGIFIKSLGSGGTEPGEFH 522
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + +G I V D NHRIQVF
Sbjct: 523 DPHGITIDKDGRIFVVDSGNHRIQVF 548
>gi|402571883|ref|YP_006621226.1| hypothetical protein Desmer_1348 [Desulfosporosinus meridiei DSM
13257]
gi|402253080|gb|AFQ43355.1| conserved repeat protein [Desulfosporosinus meridiei DSM 13257]
Length = 1977
Score = 173 bits (438), Expect = 1e-40, Method: Composition-based stats.
Identities = 107/279 (38%), Positives = 151/279 (54%), Gaps = 13/279 (4%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWP 100
G G+ G F P G+AV ++ VAD+SNHR+Q + T F+ P
Sbjct: 83 GPYGTGAGKFYSPAGVAVDGAGNVYVADTSNHRIQKRNAGTGVWTTWGSSGSGNKQFSSP 142
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+AV D ++ VAD+ N R+Q F S+G ++ ++GS+G+ GQL++P +AVS+ V V
Sbjct: 143 SGVAVDADGNVYVADTFNSRIQKFDSNGNYLTQWGSLGSDEGQLKYPFDLAVSSNGTVYV 202
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+D NN R+Q+F + GT G +G G+ GQ P I + + V V DS N
Sbjct: 203 ADQNNSRIQMF-------STSGTPQGMWGEKGSGEGQFNIPASIDIDSNGDVYVLDSANS 255
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
RVQ F +G + +GS G +GQ PRG+AV G + V D+ N RIQ FT G FL
Sbjct: 256 RVQKFQPDGSFLQQWGSGGLSDGQFFSPRGIAVSSSGSVFVADTQNKRIQKFTSSGTFLA 315
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G +G+ DGE G+AV +G I V D N RI F
Sbjct: 316 KWGSYGNNDGELYAPVGLAVDGDGKIYVGD-SNTRISKF 353
Score = 169 bits (428), Expect = 2e-39, Method: Composition-based stats.
Identities = 99/270 (36%), Positives = 147/270 (54%), Gaps = 12/270 (4%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWPRGIAVGPDN 109
F +P +A + VAD+S+HR+ P L N F P G+AV
Sbjct: 45 FFFPNSVAADDSGNFYVADTSSHRILKYDPSGVLLENWGPYGTGAGKFYSPAGVAVDGAG 104
Query: 110 SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 169
++ VAD+SNHR+Q + +GS G+ Q P +AV V V+D+ N R+Q
Sbjct: 105 NVYVADTSNHRIQKRNAGTGVWTTWGSSGSGNKQFSSPSGVAVDADGNVYVADTFNSRIQ 164
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
FD S+G ++ ++GS+G+ GQL++P +AVS+ V V+D NN R+Q+F +G
Sbjct: 165 KFD-------SNGNYLTQWGSLGSDEGQLKYPFDLAVSSNGTVYVADQNNSRIQMFSTSG 217
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+G +GS EGQ P + +D G + V DS N+R+Q F PDG FL+ +G G D
Sbjct: 218 TPQGMWGEKGSGEGQFNIPASIDIDSNGDVYVLDSANSRVQKFQPDGSFLQQWGSGGLSD 277
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F G+AV S+G++ V D +N RIQ F
Sbjct: 278 GQFFSPRGIAVSSSGSVFVADTQNKRIQKF 307
Score = 149 bits (375), Expect = 2e-33, Method: Composition-based stats.
Identities = 111/325 (34%), Positives = 152/325 (46%), Gaps = 63/325 (19%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW------ 99
GS G G F PRGIAV S+ VAD+ N R+Q ++ FLA W
Sbjct: 271 GSGGLSDGQFFSPRGIAVSSSGSVFVADTQNKRIQ------KFTSSGTFLA-KWGSYGNN 323
Query: 100 ------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
P G+AV D I V DS N R+ F S G F K+GS G Q +AV
Sbjct: 324 DGELYAPVGLAVDGDGKIYVGDS-NTRISKFNSAGAFEMKWGSSGYGDEQFSSIRNVAVD 382
Query: 154 NTNRVIVSD----------------------SNNHRVQI-------FDVNGRV------- 177
+ + +S+ N+ Q+ FD NG +
Sbjct: 383 SNGNLYISNLGTNSIKKYDPTGGYLGTPIRGGTNNVAQLWNPMGIAFDHNGNMYVCSSSK 442
Query: 178 -----FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
F S+ V +GS G+ GQ ++ + I V ++ V V+D+NN R+Q F G +
Sbjct: 443 YLVLKFDSNYNLVRSWGSQGSGNGQFDNMNGIGVDSSGNVYVADTNNSRIQKFTSEGGYL 502
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
T +GS GS +G+ PRG+AVD Q + VGD NR+Q F+ G F +G G+GDG+F
Sbjct: 503 TQWGSAGSTDGKFYSPRGIAVDSQDNVYVGDG--NRVQKFSSAGVFQATWGSSGNGDGQF 560
Query: 293 KGLEGVAVMSNGNILVCDRENHRIQ 317
G+ +AV N NI V D +NHRIQ
Sbjct: 561 SGIYSLAVDRNDNIYVADSQNHRIQ 585
Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats.
Identities = 109/320 (34%), Positives = 152/320 (47%), Gaps = 49/320 (15%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLKTNCVFLA---FTWP 100
G +GS G F P I + + + V DS+N RVQ P F + L+ F P
Sbjct: 224 GEKGSGEGQFNIPASIDIDSNGDVYVLDSANSRVQKFQPDGSFLQQWGSGGLSDGQFFSP 283
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
RGIAV S+ VAD+ N R+Q F S GTF+ K+GS GN G+L P +AV ++ V
Sbjct: 284 RGIAVSSSGSVFVADTQNKRIQKFTSSGTFLAKWGSYGNNDGELYAPVGLAVDGDGKIYV 343
Query: 161 SDSNNHRVQIF----------------------------DVNGRVFQSD-GT-FVGKFGS 190
DSN R+ F D NG ++ S+ GT + K+
Sbjct: 344 GDSNT-RISKFNSAGAFEMKWGSSGYGDEQFSSIRNVAVDSNGNLYISNLGTNSIKKYDP 402
Query: 191 MG-----------NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
G N QL +P IA + + V S+ + V FD N ++ S+GS+G
Sbjct: 403 TGGYLGTPIRGGTNNVAQLWNPMGIAFDHNGNMYVCSSSKYLVLKFDSNYNLVRSWGSQG 462
Query: 240 SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVA 299
S GQ G+ VD G + V D+ N+RIQ FT +G +L +G GS DG+F G+A
Sbjct: 463 SGNGQFDNMNGIGVDSSGNVYVADTNNSRIQKFTSEGGYLTQWGSAGSTDGKFYSPRGIA 522
Query: 300 VMSNGNILVCDRENHRIQVF 319
V S N+ V D +R+Q F
Sbjct: 523 VDSQDNVYVGD--GNRVQKF 540
Score = 96.3 bits (238), Expect = 2e-17, Method: Composition-based stats.
Identities = 79/265 (29%), Positives = 128/265 (48%), Gaps = 19/265 (7%)
Query: 19 LLVSGIGQV----GTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADS 74
L V G G++ T S++ + K GS G F+ R +AV + ++ +++
Sbjct: 333 LAVDGDGKIYVGDSNTRISKFNSAGAFEMKWGSSGYGDEQFSSIRNVAVDSNGNLYISNL 392
Query: 75 SNHRVQVCFPH-----FDLKTNCVFLAFTW-PRGIAVGPDNSIVVADSSNHRVQVFQSDG 128
+ ++ P ++ +A W P GIA + ++ V SS + V F S+
Sbjct: 393 GTNSIKKYDPTGGYLGTPIRGGTNNVAQLWNPMGIAFDHNGNMYVCSSSKYLVLKFDSNY 452
Query: 129 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKF 188
V +GS G+ GQ ++ + I V ++ V V+D+NN R+Q F S+G ++ ++
Sbjct: 453 NLVRSWGSQGSGNGQFDNMNGIGVDSSGNVYVADTNNSRIQ-------KFTSEGGYLTQW 505
Query: 189 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFP 248
GS G+ G+ P IAV + + V V D N RVQ F G ++GS G+ +GQ
Sbjct: 506 GSAGSTDGKFYSPRGIAVDSQDNVYVGDGN--RVQKFSSAGVFQATWGSSGNGDGQFSGI 563
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFT 273
+AVD I V DS N+RIQ T
Sbjct: 564 YSLAVDRNDNIYVADSQNHRIQRLT 588
>gi|219852941|ref|YP_002467373.1| NHL repeat containing protein [Methanosphaerula palustris E1-9c]
gi|219547200|gb|ACL17650.1| NHL repeat containing protein [Methanosphaerula palustris E1-9c]
Length = 579
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 154/284 (54%), Gaps = 21/284 (7%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--------AF 97
G+ GS G F P G+A+ ++ V D + RVQ F+ +
Sbjct: 39 GTSGSGDGQFNSPYGVALDGVGTVYVTDKNLDRVQ----QFNATGGFIRTWGTPGSGDGL 94
Query: 98 TW-PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
W P+GIA+ ++ + ++ N RVQ F S G F+ ++G+ G GQ + P +AV +
Sbjct: 95 LWNPKGIAINSAGNVYIVNNWNDRVQRFTSTGIFLARWGTGGTGDGQFKSPSGVAVDSAG 154
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
V V+D N+RVQ F S GT + K+G+ G GQ ++P IAV + N V V D
Sbjct: 155 NVYVADMYNYRVQ-------KFSSAGTLLAKWGTEGGGDGQFDYPTGIAVDSENNVYVVD 207
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLK-FPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
S N+RVQ F NG + +G+ GS +G+ FP +AVD G + V D+GNNRI+ FT +
Sbjct: 208 SYNNRVQKFTSNGTFLAKWGARGSGDGEFADFPEEIAVDSTGNVFVTDTGNNRIEKFTSN 267
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL +G GSGDG F+ G+AV S G I + D NHRIQ+F
Sbjct: 268 GTFLAKWGGRGSGDGLFESPTGIAVDSAGRIYIADTGNHRIQMF 311
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 115/231 (49%), Gaps = 41/231 (17%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG-------------- 175
FV ++G+ G+ GQ P+ +A+ V V+D N RVQ F+ G
Sbjct: 34 FVAQWGTSGSGDGQFNSPYGVALDGVGTVYVTDKNLDRVQQFNATGGFIRTWGTPGSGDG 93
Query: 176 ------------------------RV--FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
RV F S G F+ ++G+ G GQ + P +AV +
Sbjct: 94 LLWNPKGIAINSAGNVYIVNNWNDRVQRFTSTGIFLARWGTGGTGDGQFKSPSGVAVDSA 153
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
V V+D N+RVQ F G ++ +G+EG +GQ +P G+AVD + + V DS NNR+
Sbjct: 154 GNVYVADMYNYRVQKFSSAGTLLAKWGTEGGGDGQFDYPTGIAVDSENNVYVVDSYNNRV 213
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGL-EGVAVMSNGNILVCDRENHRIQVF 319
Q FT +G FL +G GSGDGEF E +AV S GN+ V D N+RI+ F
Sbjct: 214 QKFTSNGTFLAKWGARGSGDGEFADFPEEIAVDSTGNVFVTDTGNNRIEKF 264
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 77/144 (53%), Gaps = 20/144 (13%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW- 99
L K G+ G G F +P GIAV +N++ V DS N+RVQ +N FLA W
Sbjct: 175 LLAKWGTEGGGDGQFDYPTGIAVDSENNVYVVDSYNNRVQ------KFTSNGTFLA-KWG 227
Query: 100 ------------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHP 147
P IAV ++ V D+ N+R++ F S+GTF+ K+G G+ G E P
Sbjct: 228 ARGSGDGEFADFPEEIAVDSTGNVFVTDTGNNRIEKFTSNGTFLAKWGGRGSGDGLFESP 287
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIF 171
IAV + R+ ++D+ NHR+Q+F
Sbjct: 288 TGIAVDSAGRIYIADTGNHRIQMF 311
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGI 103
K G RGS G F P GIAV I +AD+ NHR+Q+ + V + T P GI
Sbjct: 273 KWGGRGSGDGLFESPTGIAVDSAGRIYIADTGNHRIQMFAYPTPTEIPTVVVPTTIPTGI 332
Query: 104 --AVGPDNSIVVADSSNHRV 121
V P +I S+ V
Sbjct: 333 PTVVEPTVTITATPSATTTV 352
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
QF+ +G GSGDG+F GVA+ G + V D+ R+Q F
Sbjct: 33 QFVAQWGTSGSGDGQFNSPYGVALDGVGTVYVTDKNLDRVQQF 75
>gi|241997422|ref|XP_002433360.1| nhl repeat-containing protein, putative [Ixodes scapularis]
gi|215490783|gb|EEC00424.1| nhl repeat-containing protein, putative [Ixodes scapularis]
Length = 631
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 159/323 (49%), Gaps = 32/323 (9%)
Query: 22 SGIGQVGTTPRSQYLQK----------RRLQFKIGSR-GSEPGCFTWPRGIAVGP-DNSI 69
S G + TTP +QK R F +R GS G P G+AV P + I
Sbjct: 316 SPTGALTTTPNQAEVQKQSADAQSRLYRSKSFLTRTRLGS--GLVQRPSGVAVSPWSSEI 373
Query: 70 VVADSSNHRVQVCFPHFDLKTNCVFL-----------AFTWPRGIAVGP-DNSIVVADSS 117
V NH+V FD T FL F P GIA+ I++ D
Sbjct: 374 FVVSMDNHKVLT----FDSTTG-KFLRSFGSRGQQEGEFLCPFGIALSSVGQEILITDKW 428
Query: 118 NHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 177
H + VF DG F + G G AG P I + NT R+ V D+ NHR+Q+ D +G
Sbjct: 429 KHCIHVFDKDGNFQRQIGMKGRSAGHFRSPESICIDNTGRIYVCDTCNHRIQVLDHDGIF 488
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
GT V + + P IAV+ + RV+V D +HR+ +F +G + +FG
Sbjct: 489 LHEIGTHVQPENAFNRSRSMFQEPTGIAVTQDAQRVVVCDFGSHRIHVFSTDGEHLFTFG 548
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+G+ +GQ P VAVD +G+I VGDSGN R+QI PDG+ +R FG GS +G+F +
Sbjct: 549 QKGALKGQFVHPECVAVDSRGFILVGDSGNGRVQICRPDGRHVRTFGNKGSSNGQFSWIS 608
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
+AV +N ++V D +NH +QVF
Sbjct: 609 SIAVTANNEVVVSDFKNHSVQVF 631
>gi|428185632|gb|EKX54484.1| hypothetical protein GUITHDRAFT_63622 [Guillardia theta CCMP2712]
Length = 287
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 135/242 (55%), Gaps = 18/242 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--------CFPHFDLKTNC 92
LQ +GSRG+ G ++P GIA+ VADS NHRVQV C + K +
Sbjct: 47 LQKTLGSRGNGDGQLSFPVGIAIDSHGRFAVADSRNHRVQVFAKDGGMACTMGREGKGDG 106
Query: 93 VFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
+ +P G+A +I V+D NHR+QVF +DGTF+ FG G+ G+L P + V
Sbjct: 107 ELM---YPMGVAFDGKQNIFVSDWGNHRIQVFAADGTFLRTFGKAGDGNGELNAPVGVVV 163
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
+ R++VSD N+R+Q VF DG FV +G G G+ P +A+ +
Sbjct: 164 DKSGRIVVSDCQNNRLQ-------VFTDDGDFVCVWGRQGESEGEFNCPMGLALDEAGNI 216
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+V+D+ NHR+Q+ D NGR + S GS GS+ G+L P GVAVD+ G I V D N R+QIF
Sbjct: 217 VVADAKNHRLQVLDANGRFVRSIGSSGSKLGELNVPGGVAVDESGNIVVADCKNRRVQIF 276
Query: 273 TP 274
P
Sbjct: 277 AP 278
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 145/269 (53%), Gaps = 15/269 (5%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------FTWPRGIAVGPDNS 110
PR +A+ D +I V +H+V + + D + ++P GIA+
Sbjct: 16 PRYVAIVDDGTIAVTSYGSHQVMI-YSGTDGTLQKTLGSRGNGDGQLSFPVGIAIDSHGR 74
Query: 111 IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
VADS NHRVQVF DG G G G+L +P +A + VSD NHR+Q
Sbjct: 75 FAVADSRNHRVQVFAKDGGMACTMGREGKGDGELMYPMGVAFDGKQNIFVSDWGNHRIQ- 133
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VF +DGTF+ FG G+ G+L P + V + R++VSD N+R+Q+F +G
Sbjct: 134 ------VFAADGTFLRTFGKAGDGNGELNAPVGVVVDKSGRIVVSDCQNNRLQVFTDDGD 187
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+ +G +G EG+ P G+A+D+ G I V D+ N+R+Q+ +G+F+R+ G GS G
Sbjct: 188 FVCVWGRQGESEGEFNCPMGLALDEAGNIVVADAKNHRLQVLDANGRFVRSIGSSGSKLG 247
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
E GVAV +GNI+V D +N R+Q+F
Sbjct: 248 ELNVPGGVAVDESGNIVVADCKNRRVQIF 276
>gi|20090869|ref|NP_616944.1| hypothetical protein MA2021 [Methanosarcina acetivorans C2A]
gi|19915942|gb|AAM05424.1| hypothetical protein MA_2021 [Methanosarcina acetivorans C2A]
Length = 341
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 160/293 (54%), Gaps = 14/293 (4%)
Query: 33 SQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHF 86
+ Y + K GS GS+ G F P G+AV ++ V + SNHR+Q +
Sbjct: 28 ATYAKTYNFVTKWGSYGSDSGQFICPIGVAVDSSGNVYVTEISNHRIQKFNSTGGYITQW 87
Query: 87 DLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH 146
D + F+ P GIAV ++ VAD+ N R+Q F G ++ ++GS+G+ GQ +
Sbjct: 88 DSSRSGNRKLFS-PYGIAVDSSGNVYVADTGNKRIQKFNGTGGYLTQWGSLGSGNGQFIY 146
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
PH +AV ++ V V+D+ N+R+Q F+ S G ++ ++GS G+ GQ P +AV
Sbjct: 147 PHGVAVDSSGNVYVTDAGNNRIQKFN-------STGGYLTQWGSYGSGNGQFNDPEGVAV 199
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
++ V V DS+N+R+Q F+ G +T +GS GS GQ P G+AVD G + V D N
Sbjct: 200 DSSGNVYVVDSDNNRIQKFNGTGGYLTQWGSYGSGNGQFLLPCGIAVDSSGNVYVADDFN 259
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
RIQ F +G++L + SG+G+ G+AV S+GN+ V + RIQ F
Sbjct: 260 QRIQKFNSNGRYLTQWDSSRSGNGQIYDPTGIAVDSSGNVYVAESGYSRIQKF 312
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWP 100
GS GS G F P G+AV ++ V DS N+R+Q T F P
Sbjct: 182 GSYGSGNGQFNDPEGVAVDSSGNVYVVDSDNNRIQKFNGTGGYLTQWGSYGSGNGQFLLP 241
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
GIAV ++ VAD N R+Q F S+G ++ ++ S + GQ+ P IAV ++ V V
Sbjct: 242 CGIAVDSSGNVYVADDFNQRIQKFNSNGRYLTQWDSSRSGNGQIYDPTGIAVDSSGNVYV 301
Query: 161 SDSNNHRVQIFDVN 174
++S R+Q F N
Sbjct: 302 AESGYSRIQKFAPN 315
>gi|312385418|gb|EFR29928.1| hypothetical protein AND_00800 [Anopheles darlingi]
Length = 1298
Score = 168 bits (425), Expect = 4e-39, Method: Composition-based stats.
Identities = 103/197 (52%), Positives = 114/197 (57%), Gaps = 54/197 (27%)
Query: 21 VSGI-GQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRV 79
V GI G G +PR+QYLQKRR F+IG RGSEPG FTWPRGIAVGPDNSIVVADSSNHRV
Sbjct: 1079 VVGIPGAAGMSPRTQYLQKRRQLFQIGGRGSEPGSFTWPRGIAVGPDNSIVVADSSNHRV 1138
Query: 80 QVCFPHFDLKTNCVFLA-----------FTWPRGIAVGPDNSIVVADSSNHRVQV----- 123
QV FD +N +F+ F G+AV ++AD NHR+QV
Sbjct: 1139 QV----FD--SNGIFVKEFGQYGNGDGEFDCLAGVAVNRIGQFIIADRYNHRIQVLDPAG 1192
Query: 124 -----FQSDGTFVGK--------------------------FGSMGNKAGQLEHPHYIAV 152
F S GT GK FGS G + GQLEHPHYIAV
Sbjct: 1193 RFLRSFGSQGTTDGKFNYPWGITTDALGFIYVCDKENHRIQFGSCGKEKGQLEHPHYIAV 1252
Query: 153 SNTNRVIVSDSNNHRVQ 169
SNTNRVIVSDSNNHRVQ
Sbjct: 1253 SNTNRVIVSDSNNHRVQ 1269
Score = 127 bits (318), Expect = 9e-27, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 106/198 (53%), Gaps = 26/198 (13%)
Query: 120 RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ 179
R Q+FQ G G++ G P IAV N ++V+DS+NHRVQ+FD
Sbjct: 1098 RRQLFQ--------IGGRGSEPGSFTWPRGIAVGPDNSIVVADSSNHRVQVFD------- 1142
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
S+G FV +FG GN G+ + +AV+ + I++D NHR+Q+ D GR + SFGS+G
Sbjct: 1143 SNGIFVKEFGQYGNGDGEFDCLAGVAVNRIGQFIIADRYNHRIQVLDPAGRFLRSFGSQG 1202
Query: 240 SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVA 299
+ +G+ +P G+ D G+I V D N+RIQ FG G G+ + +A
Sbjct: 1203 TTDGKFNYPWGITTDALGFIYVCDKENHRIQ-----------FGSCGKEKGQLEHPHYIA 1251
Query: 300 VMSNGNILVCDRENHRIQ 317
V + ++V D NHR+Q
Sbjct: 1252 VSNTNRVIVSDSNNHRVQ 1269
Score = 90.9 bits (224), Expect = 7e-16, Method: Composition-based stats.
Identities = 46/99 (46%), Positives = 60/99 (60%), Gaps = 8/99 (8%)
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R Q+F + GR GSE G +PRG+AV I V DS N+R+Q+F +G F++
Sbjct: 1098 RRQLFQIGGR--------GSEPGSFTWPRGIAVGPDNSIVVADSSNHRVQVFDSNGIFVK 1149
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG +G+GDGEF L GVAV G ++ DR NHRIQV
Sbjct: 1150 EFGQYGNGDGEFDCLAGVAVNRIGQFIIADRYNHRIQVL 1188
>gi|402571882|ref|YP_006621225.1| hypothetical protein Desmer_1347 [Desulfosporosinus meridiei DSM
13257]
gi|402253079|gb|AFQ43354.1| conserved repeat protein [Desulfosporosinus meridiei DSM 13257]
Length = 2025
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 149/279 (53%), Gaps = 10/279 (3%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN-----CVFLAFT 98
K GS GS+ G F P+GIAV + +I VADS+NHR+Q T F
Sbjct: 964 KWGSNGSDQGEFNRPQGIAVDSEGNIYVADSNNHRIQKFNAAGAFMTTWGSFGTELGQFN 1023
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P+GIAV + ++ VAD N RVQ F S G FGS G G+ + P +AV + +
Sbjct: 1024 SPKGIAVDSNGNVYVADVENDRVQKFDSMGGNPQGFGSTGTDEGEFKKPSGVAVDSDGNI 1083
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
V ++ NHR+Q FD FQ T+ G GN GQ P + V ++ + V D+N
Sbjct: 1084 YVVEAMNHRMQKFD---SAFQPQYTWGGT--GYGNGDGQFNSPSGVTVDSSGNIYVLDNN 1138
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
N+RVQ FD NG + +GS G+ + Q FP G+AVD G + V D+ N I+ +TP+G
Sbjct: 1139 NNRVQKFDANGEFVLKWGSPGAGDSQFLFPHGIAVDSAGNVYVADTSANWIRKYTPEGTL 1198
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
L +G G+ G+F G+A S GN+ V D N+RIQ
Sbjct: 1199 LAKWGTRGNSAGQFDNPYGIAADSAGNVYVADTNNNRIQ 1237
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 130/220 (59%), Gaps = 7/220 (3%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ V + I VAD+ N+++Q + ++G F+ K+GS G Q P +A ++ V
Sbjct: 884 PLGLTVDQEGYIYVADALNYQIQKYSAEGEFLAKWGSQGVGNVQFGAPQDVATDSSGNVY 943
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V DS N R+Q FD S G+F+ K+GS G+ G+ P IAV + + V+DSNN
Sbjct: 944 VVDSGNKRIQKFD-------SSGSFLKKWGSNGSDQGEFNRPQGIAVDSEGNIYVADSNN 996
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HR+Q F+ G +T++GS G+E GQ P+G+AVD G + V D N+R+Q F G
Sbjct: 997 HRIQKFNAAGAFMTTWGSFGTELGQFNSPKGIAVDSNGNVYVADVENDRVQKFDSMGGNP 1056
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ FG G+ +GEFK GVAV S+GNI V + NHR+Q F
Sbjct: 1057 QGFGSTGTDEGEFKKPSGVAVDSDGNIYVVEAMNHRMQKF 1096
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/278 (37%), Positives = 145/278 (52%), Gaps = 32/278 (11%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----------FTWPRGIAVG 106
P G+ V + I VAD+ N+++Q FLA F P+ +A
Sbjct: 884 PLGLTVDQEGYIYVADALNYQIQ------KYSAEGEFLAKWGSQGVGNVQFGAPQDVATD 937
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
++ V DS N R+Q F S G+F+ K+GS G+ G+ P IAV + + V+DSNNH
Sbjct: 938 SSGNVYVVDSGNKRIQKFDSSGSFLKKWGSNGSDQGEFNRPQGIAVDSEGNIYVADSNNH 997
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
R+Q F+ + G F+ +GS G + GQ P IAV + V V+D N RVQ FD
Sbjct: 998 RIQKFN-------AAGAFMTTWGSFGTELGQFNSPKGIAVDSNGNVYVADVENDRVQKFD 1050
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW- 285
G FGS G++EG+ K P GVAVD G I V ++ N+R+Q F D F + W
Sbjct: 1051 SMGGNPQGFGSTGTDEGEFKKPSGVAVDSDGNIYVVEAMNHRMQKF--DSAFQPQY-TWG 1107
Query: 286 ----GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+GDG+F GV V S+GNI V D N+R+Q F
Sbjct: 1108 GTGYGNGDGQFNSPSGVTVDSSGNIYVLDNNNNRVQKF 1145
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 151/299 (50%), Gaps = 26/299 (8%)
Query: 34 QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV 93
+Y + K GS+G F P+ +A ++ V DS N R+Q FD ++
Sbjct: 907 KYSAEGEFLAKWGSQGVGNVQFGAPQDVATDSSGNVYVVDSGNKRIQ----KFD--SSGS 960
Query: 94 FLA-----------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
FL F P+GIAV + +I VADS+NHR+Q F + G F+ +GS G + G
Sbjct: 961 FLKKWGSNGSDQGEFNRPQGIAVDSEGNIYVADSNNHRIQKFNAAGAFMTTWGSFGTELG 1020
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
Q P IAV + V V+D N RVQ FD G Q FGS G G+ + P
Sbjct: 1021 QFNSPKGIAVDSNGNVYVADVENDRVQKFDSMGGNPQG-------FGSTGTDEGEFKKPS 1073
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF--PRGVAVDDQGYIS 260
+AV + + V ++ NHR+Q FD + ++G G G +F P GV VD G I
Sbjct: 1074 GVAVDSDGNIYVVEAMNHRMQKFDSAFQPQYTWGGTGYGNGDGQFNSPSGVTVDSSGNIY 1133
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V D+ NNR+Q F +G+F+ +G G+GD +F G+AV S GN+ V D + I+ +
Sbjct: 1134 VLDNNNNRVQKFDANGEFVLKWGSPGAGDSQFLFPHGIAVDSAGNVYVADTSANWIRKY 1192
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 147/318 (46%), Gaps = 60/318 (18%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW------------PRG 102
F PR AV ++I + DS+ H+++ L + LA TW P
Sbjct: 692 FDVPRAAAVDSSSNIYIVDSNRHQIK------KLSSMGEILA-TWGSYGNENGQMNVPGH 744
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
IA+ ++++ VAD+ N+R+Q F S G ++ KFGS G+ GQ +P + V + + V+D
Sbjct: 745 IALDSEDNVYVADTGNNRIQKFSSTGEYLMKFGSSGSGEGQFRNPKSVTVDSAGNIYVAD 804
Query: 163 SNNHRVQIFDVNG---------------------------------------RV--FQSD 181
+ N R+Q FD +G RV F S
Sbjct: 805 TTNKRIQKFDSDGAFILEWETSPASGDYQLNQLTDIAVDIHDYVYVVDANDQRVHKFTSA 864
Query: 182 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSE 241
G +VG G G L P + V + V+D+ N+++Q + G + +GS+G
Sbjct: 865 GVYVGAIGGPGGTGDPLNLPLGLTVDQEGYIYVADALNYQIQKYSAEGEFLAKWGSQGVG 924
Query: 242 EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVM 301
Q P+ VA D G + V DSGN RIQ F G FL+ +G GS GEF +G+AV
Sbjct: 925 NVQFGAPQDVATDSSGNVYVVDSGNKRIQKFDSSGSFLKKWGSNGSDQGEFNRPQGIAVD 984
Query: 302 SNGNILVCDRENHRIQVF 319
S GNI V D NHRIQ F
Sbjct: 985 SEGNIYVADSNNHRIQKF 1002
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 146/329 (44%), Gaps = 56/329 (17%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL-----KTNCVFL 95
L G G + F P IAV + I VADS N+R+Q D +
Sbjct: 271 LLLNWGGEGRDDDQFDDPCSIAVDSGDQIYVADSENNRIQKFASSGDFLKKWGRGGSADG 330
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F+ P GIA + +I V+D++N+R++ F S G FV +GS G QL+ P I V
Sbjct: 331 EFSLPFGIARDSEGNIYVSDTTNNRIEKFDSTGAFVTTWGSFGKDNHQLDMPMGIVVDPD 390
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQS---------------------DGTFVG-------- 186
+ V V+D NN+R+Q FD +G + G FV
Sbjct: 391 DNVYVADMNNNRIQKFDASGGYLATIESSEETDLSINKPMGLAADGSGIFVTELMNHRVQ 450
Query: 187 KFGSMGNKAGQL------------EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
KF S G G L P +AV + + V D+ N RVQ F R ++
Sbjct: 451 KFASSGASLGTLGGTDPGTGPGEFAAPGSVAVDSAGNIYVLDTQNSRVQKF----REFSA 506
Query: 235 ------FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
+GS GSE+GQ P G+AVD G + V D GN RIQ F+ G+FL +G G
Sbjct: 507 EGFEREWGSFGSEDGQFINPNGIAVDSAGNVYVSDGGNYRIQKFSSSGEFLEKWGSPGVD 566
Query: 289 DGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
G+F V V N +I V D N+RIQ
Sbjct: 567 AGQFLMPGSVMVDGNNSIYVVDSGNNRIQ 595
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 135/279 (48%), Gaps = 12/279 (4%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD----LKTNCVFLAFTWPR 101
G +GSE G IAV D ++ VADS N+RVQ D L+++ PR
Sbjct: 88 GIQGSENGQIDELTDIAVDGDGNVYVADSGNNRVQKFSSAGDFIMMLESSGNAEYPMSPR 147
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
G+A D +I V +++RV+ F S G + + Q P IAV V V+
Sbjct: 148 GVAADSDGNIYVTYETDNRVEKFDSSGQVDSDWWNQAAGDYQFSQPTDIAVDKDGNVYVA 207
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA-GQLEHPHYIAVSNTNRVIVSDSNNH 220
D++ R+ F S G + FG QL P +AV ++ V D++
Sbjct: 208 DTDMGRI-------VQFTSAGDLLLMFGEEDEDGEDQLIEPIGVAVDSSGNVYAVDAHTK 260
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
++ F+ +G ++ ++G EG ++ Q P +AVD I V DS NNRIQ F G FL+
Sbjct: 261 QILKFNASGNLLLNWGGEGRDDDQFDDPCSIAVDSGDQIYVADSENNRIQKFASSGDFLK 320
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G GS DGEF G+A S GNI V D N+RI+ F
Sbjct: 321 KWGRGGSADGEFSLPFGIARDSEGNIYVSDTTNNRIEKF 359
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 131/268 (48%), Gaps = 13/268 (4%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIV 112
PRG+A D +I V +++RV+ + ++ A F+ P IAV D ++
Sbjct: 146 PRGVAADSDGNIYVTYETDNRVEKFDSSGQVDSDWWNQAAGDYQFSQPTDIAVDKDGNVY 205
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSMGNKA-GQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
VAD+ R+ F S G + FG QL P +AV ++ V D+ H QI
Sbjct: 206 VADTDMGRIVQFTSAGDLLLMFGEEDEDGEDQLIEPIGVAVDSSGNVYAVDA--HTKQIL 263
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
F + G + +G G Q + P IAV + +++ V+DS N+R+Q F +G
Sbjct: 264 K-----FNASGNLLLNWGGEGRDDDQFDDPCSIAVDSGDQIYVADSENNRIQKFASSGDF 318
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ +G GS +G+ P G+A D +G I V D+ NNRI+ F G F+ +G +G + +
Sbjct: 319 LKKWGRGGSADGEFSLPFGIARDSEGNIYVSDTTNNRIEKFDSTGAFVTTWGSFGKDNHQ 378
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ V + N+ V D N+RIQ F
Sbjct: 379 LDMPMGIVVDPDDNVYVADMNNNRIQKF 406
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 127/276 (46%), Gaps = 24/276 (8%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF-----------TWPRGI 103
F+ P IAV D ++ VAD+ R+ DL L F P G+
Sbjct: 190 FSQPTDIAVDKDGNVYVADTDMGRIVQFTSAGDL-----LLMFGEEDEDGEDQLIEPIGV 244
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 163
AV ++ D+ ++ F + G + +G G Q + P IAV + +++ V+DS
Sbjct: 245 AVDSSGNVYAVDAHTKQILKFNASGNLLLNWGGEGRDDDQFDDPCSIAVDSGDQIYVADS 304
Query: 164 NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
N+R+Q F S G F+ K+G G+ G+ P IA + + VSD+ N+R++
Sbjct: 305 ENNRIQ-------KFASSGDFLKKWGRGGSADGEFSLPFGIARDSEGNIYVSDTTNNRIE 357
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
FD G +T++GS G + QL P G+ VD + V D NNRIQ F G +L
Sbjct: 358 KFDSTGAFVTTWGSFGKDNHQLDMPMGIVVDPDDNVYVADMNNNRIQKFDASGGYLATIE 417
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D G+A +G I V + NHR+Q F
Sbjct: 418 SSEETDLSINKPMGLAADGSG-IFVTELMNHRVQKF 452
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 109/228 (47%), Gaps = 14/228 (6%)
Query: 97 FTWPRGIAVGPDNSIV---VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F P+ +AV + V D S +++ S G + +G G++ GQ++ IAV
Sbjct: 47 FESPKAVAVDGSDIYVGTSAGDISPYQITKVSSTGELLESWGIQGSENGQIDELTDIAVD 106
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
V V+DS N+RVQ F S G F+ S GN + P +A + +
Sbjct: 107 GDGNVYVADSGNNRVQ-------KFSSAGDFIMMLESSGNAEYPMS-PRGVAADSDGNIY 158
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
V+ ++RV+ FD +G+V + + ++ + + Q P +AVD G + V D+ RI FT
Sbjct: 159 VTYETDNRVEKFDSSGQVDSDWWNQAAGDYQFSQPTDIAVDKDGNVYVADTDMGRIVQFT 218
Query: 274 PDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHRIQVF 319
G L FG DGE + +E GVAV S+GN+ D +I F
Sbjct: 219 SAGDLLLMFGEEDE-DGEDQLIEPIGVAVDSSGNVYAVDAHTKQILKF 265
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 34 QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHF 86
+Y + L K G+RG+ G F P GIA ++ VAD++N+R+Q P +
Sbjct: 1191 KYTPEGTLLAKWGTRGNSAGQFDNPYGIAADSAGNVYVADTNNNRIQKLAPAY 1243
>gi|302527064|ref|ZP_07279406.1| predicted protein [Streptomyces sp. AA4]
gi|302435959|gb|EFL07775.1| predicted protein [Streptomyces sp. AA4]
Length = 602
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 166/346 (47%), Gaps = 59/346 (17%)
Query: 31 PRSQ---YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------ 81
PR+Q Y QF G GS PG + P G+A IVVAD +N+RV V
Sbjct: 165 PRNQVKIYDSTGAFQFGFGPLGSGPGELSSPLGVAADSKGRIVVADQANNRVAVFNSAGE 224
Query: 82 -CFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNK 140
F L + L F + G+AV + I+VAD N+RVQVF G ++ +FG +G
Sbjct: 225 HLFDFGQLGSGDGELNFAF--GVAVNSRDDIIVADCGNNRVQVFDPAGRYLRQFGGLGAG 282
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR------------------------ 176
G+L P ++AV + ++V+DS N RVQ+F +GR
Sbjct: 283 DGELNQPFHVAVDANDNIVVADSGNDRVQLFSPDGRFLAGFGRTRRPSVRALGESPLNFP 342
Query: 177 ----------------------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
V +DG V GS+G G+L P+ +A + + V
Sbjct: 343 MGIDVDSQRNIVVSDTRSSRVVVLDADGVLVRAIGSLGTGPGELHFPYEVAAGPNDSIYV 402
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
D N RVQ+F G + FG G+ EG+ P G+AVD QG I VGD G++ IQ+F P
Sbjct: 403 VDQGNRRVQVFSREGEYLFGFGGLGAGEGKFSNPSGIAVDSQGRIIVGDGGSSLIQVFDP 462
Query: 275 DGQFLRAFGCWGSGDGEFKGLE-GVAVMSNGNILVCDRENHRIQVF 319
G+FL FG G GDG+F G + VAV+++ I D +H +QVF
Sbjct: 463 TGRFLFQFGETGDGDGQFNGFQISVAVLADDRIAAVDGRHHHVQVF 508
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 156/309 (50%), Gaps = 43/309 (13%)
Query: 52 PGCFTWPRGIAVGPDNSIVVADSSNH--RVQVCFPHFDLKTNC----VFLAFT------- 98
PG F P+G++V + +IVV D VQV P DL + +F F
Sbjct: 7 PGEFLNPQGVSVDREGNIVVIDGGARPPDVQVFRPDGDLAESSDEPFLFRNFLGTPGADL 66
Query: 99 ------------------------WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKF 134
+P A+ D +VV D+ HRV+++ DG ++G F
Sbjct: 67 QQGSAAGQRPPDGGSRGRVDEDWLFPLDSAIDRDGRVVVLDA--HRVKIYDIDGRYLGLF 124
Query: 135 GSMGNKAGQLEHPHYIAVSNTNRVIVSDS---NNH-RVQIFDVNGRVFQSDGTFVGKFGS 190
G +G L IAV N NRVI++D+ N H Q+ +++ S G F FG
Sbjct: 125 GGVGWAEEDLISECGIAVDNQNRVIITDNASRNPHLEPQLPRNQVKIYDSTGAFQFGFGP 184
Query: 191 MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRG 250
+G+ G+L P +A + R++V+D N+RV +F+ G + FG GS +G+L F G
Sbjct: 185 LGSGPGELSSPLGVAADSKGRIVVADQANNRVAVFNSAGEHLFDFGQLGSGDGELNFAFG 244
Query: 251 VAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
VAV+ + I V D GNNR+Q+F P G++LR FG G+GDGE VAV +N NI+V D
Sbjct: 245 VAVNSRDDIIVADCGNNRVQVFDPAGRYLRQFGGLGAGDGELNQPFHVAVDANDNIVVAD 304
Query: 311 RENHRIQVF 319
N R+Q+F
Sbjct: 305 SGNDRVQLF 313
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 152/298 (51%), Gaps = 35/298 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPR---- 101
GSRG + +P A+ D +VV D+ HRV++ D + +F W
Sbjct: 80 GSRGRVDEDWLFPLDSAIDRDGRVVVLDA--HRVKIY--DIDGRYLGLFGGVGWAEEDLI 135
Query: 102 ---GIAVGPDNSIVVADSSN-----------HRVQVFQSDGTFVGKFGSMGNKAGQLEHP 147
GIAV N +++ D+++ ++V+++ S G F FG +G+ G+L P
Sbjct: 136 SECGIAVDNQNRVIITDNASRNPHLEPQLPRNQVKIYDSTGAFQFGFGPLGSGPGELSSP 195
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
+A + R++V+D N+RV VF S G + FG +G+ G+L +AV+
Sbjct: 196 LGVAADSKGRIVVADQANNRVA-------VFNSAGEHLFDFGQLGSGDGELNFAFGVAVN 248
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+ + +IV+D N+RVQ+FD GR + FG G+ +G+L P VAVD I V DSGN+
Sbjct: 249 SRDDIIVADCGNNRVQVFDPAGRYLRQFGGLGAGDGELNQPFHVAVDANDNIVVADSGND 308
Query: 268 RIQIFTPDGQFLRAFG------CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
R+Q+F+PDG+FL FG G+ G+ V S NI+V D + R+ V
Sbjct: 309 RVQLFSPDGRFLAGFGRTRRPSVRALGESPLNFPMGIDVDSQRNIVVSDTRSSRVVVL 366
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 153/349 (43%), Gaps = 78/349 (22%)
Query: 31 PRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT 90
P +YL++ G G+ G P +AV +++IVVADS N RVQ+ P
Sbjct: 268 PAGRYLRQ------FGGLGAGDGELNQPFHVAVDANDNIVVADSGNDRVQLFSP------ 315
Query: 91 NCVFLA-----------------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGK 133
+ FLA +P GI V +IVV+D+ + RV V +DG V
Sbjct: 316 DGRFLAGFGRTRRPSVRALGESPLNFPMGIDVDSQRNIVVSDTRSSRVVVLDADGVLVRA 375
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF---------------------- 171
GS+G G+L P+ +A + + V D N RVQ+F
Sbjct: 376 IGSLGTGPGELHFPYEVAAGPNDSIYVVDQGNRRVQVFSREGEYLFGFGGLGAGEGKFSN 435
Query: 172 ------DVNGR------------VFQSDGTFVGKFGSMGNKAGQLEHPHY-IAVSNTNRV 212
D GR VF G F+ +FG G+ GQ +AV +R+
Sbjct: 436 PSGIAVDSQGRIIVGDGGSSLIQVFDPTGRFLFQFGETGDGDGQFNGFQISVAVLADDRI 495
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG-YISVGDSGNNRIQI 271
D +H VQ+FD GR G+EG+EEG + P+ VA D G +I V D GN+R+QI
Sbjct: 496 AAVDGRHHHVQVFDSGGRFEFRIGTEGTEEGNFRAPQAVAADRSGQHIVVTDPGNDRVQI 555
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN-ILVCDRENHRIQVF 319
F P+G+ + G G VA+ +G ILV N RIQV+
Sbjct: 556 FDPNGKLQQVHTVEGQTAG------CVAIDEDGKRILVAIPTNDRIQVY 598
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 91/232 (39%), Gaps = 56/232 (24%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC-----FPHFDLKTNCVFLAFTW 99
IGS G+ PG +P +A GP++SI V D N RVQV + F+
Sbjct: 376 IGSLGTGPGELHFPYEVAAGPNDSIYVVDQGNRRVQVFSREGEYLFGFGGLGAGEGKFSN 435
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY-IAVSNTNRV 158
P GIAV I+V D + +QVF G F+ +FG G+ GQ +AV +R+
Sbjct: 436 PSGIAVDSQGRIIVGDGGSSLIQVFDPTGRFLFQFGETGDGDGQFNGFQISVAVLADDRI 495
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT--------- 209
D +H VQ+FD GR F + G+ G + G P +A +
Sbjct: 496 AAVDGRHHHVQVFDSGGR-------FEFRIGTEGTEEGNFRAPQAVAADRSGQHIVVTDP 548
Query: 210 ----------------------------------NRVIVSDSNNHRVQIFDV 227
R++V+ N R+Q++D+
Sbjct: 549 GNDRVQIFDPNGKLQQVHTVEGQTAGCVAIDEDGKRILVAIPTNDRIQVYDM 600
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 18/144 (12%)
Query: 40 RLQFKIGSRGSEPGCFT-WPRGIAVGPDNSIVVADSSNHRVQVCFP----HFDLKTNCVF 94
R F+ G G G F + +AV D+ I D +H VQV F + T
Sbjct: 465 RFLFQFGETGDGDGQFNGFQISVAVLADDRIAAVDGRHHHVQVFDSGGRFEFRIGTEGTE 524
Query: 95 LA-FTWPRGIAVGPDNS---IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
F P+ +A D S IVV D N RVQ+F +G G AG +
Sbjct: 525 EGNFRAPQAVAA--DRSGQHIVVTDPGNDRVQIFDPNGKLQQVHTVEGQTAG------CV 576
Query: 151 AV-SNTNRVIVSDSNNHRVQIFDV 173
A+ + R++V+ N R+Q++D+
Sbjct: 577 AIDEDGKRILVAIPTNDRIQVYDM 600
>gi|260806841|ref|XP_002598292.1| hypothetical protein BRAFLDRAFT_69647 [Branchiostoma floridae]
gi|229283564|gb|EEN54304.1| hypothetical protein BRAFLDRAFT_69647 [Branchiostoma floridae]
Length = 728
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 155/299 (51%), Gaps = 26/299 (8%)
Query: 28 GTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD 87
G+ PRS ++ L ++G +G G FT P+G+A P I+VADS+N +QV D
Sbjct: 445 GSRPRSNPIEDD-LVMRVGVKGRNKGEFTNPQGVATCP-GKIIVADSNNQVIQVFSNMGD 502
Query: 88 LKTNCVFLA-------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNK 140
K F A P G+ V + + +VAD N V VF DG F+ KFGS
Sbjct: 503 FKLK--FGARGRNAGQLQRPTGVTVSHNGNYIVADYDNKWVSVFGPDGKFINKFGS---- 556
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
G+L P +AV +IV D N +F +FQS+G F+ KFGS GN Q
Sbjct: 557 -GKLLGPKGVAVDKNGHIIVVD--NKASCVF-----IFQSNGKFLQKFGSRGNDDKQFAG 608
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
PH++AVS N ++VSD +NH V++FD NG + FGS G GQ P GVAVD G I
Sbjct: 609 PHFVAVSPANNIVVSDFHNHCVKVFDPNGTFLYRFGSNGEGNGQFNAPTGVAVDSSGNII 668
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V D GN+RIQ+F G FL G +G+ + ++G + V D NH +++
Sbjct: 669 VADWGNSRIQVFDCTGSFLSYVNTMAD---PLYGPQGLCLTADGYVAVADSGNHCFKIY 724
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWP 100
++ GS G G F P G+AV +I+VAD N R+QV C F N + P
Sbjct: 641 YRFGSNGEGNGQFNAPTGVAVDSSGNIIVADWGNSRIQVFDCTGSFLSYVNTMADPLYGP 700
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
+G+ + D + VADS NH ++++
Sbjct: 701 QGLCLTADGYVAVADSGNHCFKIYK 725
>gi|440804160|gb|ELR25038.1| Bbox zinc finger domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 690
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 147/276 (53%), Gaps = 32/276 (11%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------AFTWPRGIAVG- 106
F WP +AV IVVAD R+QVC + + +W G+AV
Sbjct: 436 FGWPWAVAVDAAGHIVVAD--YRRLQVCRADDGSCVRALVIPGSGAQSGISW--GVAVDH 491
Query: 107 PDNSIVVADSSNHRVQVFQ-SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
IVVAD NHRV V++ DG+FV FGS G+ GQ + P +AV V V+DS N
Sbjct: 492 ATGHIVVADCDNHRVHVWRVDDGSFVRTFGSGGSGPGQFQRPRGVAVDKEGHVFVADSEN 551
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDSNNHRVQI 224
HRVQ++ N DG+F+ FGS G GQ + P +AV + T +IV+DS NHRV +
Sbjct: 552 HRVQVWRAN------DGSFLRTFGSQGGGPGQFQEPAGVAVDAATGNIIVADSGNHRVHV 605
Query: 225 FDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGC 284
+ +G SFG Q P GVAVD G + V D GN+R+ ++ DG FLR FG
Sbjct: 606 WHADG----SFG-------QFNSPEGVAVDTAGNVIVADWGNHRVHVWRADGSFLRTFGS 654
Query: 285 WGSGDGEFKGLEGVAV-MSNGNILVCDRENHRIQVF 319
G G +F GVAV + G+I+V D N R+QV+
Sbjct: 655 QGGGPAQFNRPTGVAVDAATGHIIVVDSSNKRVQVW 690
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 99/193 (51%), Gaps = 36/193 (18%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------- 95
GS GS PG F PRG+AV + + VADS NHRVQV + FL
Sbjct: 521 GSGGSGPGQFQRPRGVAVDKEGHVFVADSENHRVQVW-----RANDGSFLRTFGSQGGGP 575
Query: 96 -AFTWPRGIAV-GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F P G+AV +I+VADS NHRV V+ +DG+F GQ P +AV
Sbjct: 576 GQFQEPAGVAVDAATGNIIVADSGNHRVHVWHADGSF-----------GQFNSPEGVAVD 624
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRV 212
VIV+D NHRV V+++DG+F+ FGS G Q P +AV + T +
Sbjct: 625 TAGNVIVADWGNHRVH-------VWRADGSFLRTFGSQGGGPAQFNRPTGVAVDAATGHI 677
Query: 213 IVSDSNNHRVQIF 225
IV DS+N RVQ++
Sbjct: 678 IVVDSSNKRVQVW 690
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 51/123 (41%), Gaps = 47/123 (38%)
Query: 244 QLKFPRGVAVDDQGYISVGD----------------------SG---------------- 265
Q +P VAVD G+I V D SG
Sbjct: 435 QFGWPWAVAVDAAGHIVVADYRRLQVCRADDGSCVRALVIPGSGAQSGISWGVAVDHATG 494
Query: 266 --------NNRIQIF-TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
N+R+ ++ DG F+R FG GSG G+F+ GVAV G++ V D ENHR+
Sbjct: 495 HIVVADCDNHRVHVWRVDDGSFVRTFGSGGSGPGQFQRPRGVAVDKEGHVFVADSENHRV 554
Query: 317 QVF 319
QV+
Sbjct: 555 QVW 557
>gi|156371741|ref|XP_001628920.1| predicted protein [Nematostella vectensis]
gi|156215909|gb|EDO36857.1| predicted protein [Nematostella vectensis]
Length = 230
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 136/242 (56%), Gaps = 24/242 (9%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV---------CFPHFDLKT 90
+ F+ GS G G P G+AV PD +IVV+D N+R+QV FP +
Sbjct: 4 KFLFRFGSLGRGEGQLQSPSGVAVTPDGNIVVSDMINNRMQVFSIKGEFQRAFPEDE--- 60
Query: 91 NCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
+ P G+AV D ++V D N R+ ++ S G V FGS+GN GQ P ++
Sbjct: 61 -----SLHHPSGVAVDTDGRVIVVDRGNARIVIYDSKGNHVTSFGSLGNGRGQFNCPSHV 115
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
A+++ +IVSD N R+Q VF S G+++ +FG G G+ P + V++ +
Sbjct: 116 AINSKGHIIVSDFGNDRIQ-------VFSSTGSYMFRFGRSGRGDGEFNWPTGVGVNSRD 168
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
VIVSDS NHR+QIF +G ++ FGSEGS EG+ K P GVAV QG I V D GN+RIQ
Sbjct: 169 EVIVSDSFNHRIQIFRADGSYLSQFGSEGSREGEFKRPEGVAVAHQGSIVVADWGNDRIQ 228
Query: 271 IF 272
+F
Sbjct: 229 VF 230
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 126/220 (57%), Gaps = 11/220 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+AV PD +IVV+D N+R+QVF G F F + L HP +AV RVI
Sbjct: 22 PSGVAVTPDGNIVVSDMINNRMQVFSIKGEFQRAF----PEDESLHHPSGVAVDTDGRVI 77
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D N R+ I+D S G V FGS+GN GQ P ++A+++ +IVSD N
Sbjct: 78 VVDRGNARIVIYD-------SKGNHVTSFGSLGNGRGQFNCPSHVAINSKGHIIVSDFGN 130
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
R+Q+F G + FG G +G+ +P GV V+ + + V DS N+RIQIF DG +L
Sbjct: 131 DRIQVFSSTGSYMFRFGRSGRGDGEFNWPTGVGVNSRDEVIVSDSFNHRIQIFRADGSYL 190
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GS +GEFK EGVAV G+I+V D N RIQVF
Sbjct: 191 SQFGSEGSREGEFKRPEGVAVAHQGSIVVADWGNDRIQVF 230
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 90/179 (50%), Gaps = 43/179 (24%)
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF------------------ 225
F+ +FGS+G GQL+ P +AV+ ++VSD N+R+Q+F
Sbjct: 5 FLFRFGSLGRGEGQLQSPSGVAVTPDGNIVVSDMINNRMQVFSIKGEFQRAFPEDESLHH 64
Query: 226 ------DVNGRVI-------------------TSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
D +GRVI TSFGS G+ GQ P VA++ +G+I
Sbjct: 65 PSGVAVDTDGRVIVVDRGNARIVIYDSKGNHVTSFGSLGNGRGQFNCPSHVAINSKGHII 124
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V D GN+RIQ+F+ G ++ FG G GDGEF GV V S ++V D NHRIQ+F
Sbjct: 125 VSDFGNDRIQVFSSTGSYMFRFGRSGRGDGEFNWPTGVGVNSRDEVIVSDSFNHRIQIF 183
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+N + + FGS G EGQL+ P GVAV G I V D NNR+Q+F+ G+F RAF
Sbjct: 1 MNSKFLFRFGSLGRGEGQLQSPSGVAVTPDGNIVVSDMINNRMQVFSIKGEFQRAF---- 56
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D GVAV ++G ++V DR N RI ++
Sbjct: 57 PEDESLHHPSGVAVDTDGRVIVVDRGNARIVIY 89
>gi|440794608|gb|ELR15768.1| Bbox zinc finger domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 701
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 156/280 (55%), Gaps = 26/280 (9%)
Query: 55 FTWPRGIAV-GPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWP---------RGIA 104
F P +AV IVVAD S +V VC +CV T P G+A
Sbjct: 433 FRRPWAVAVDAAAGHIVVADCS--QVHVCRAD---DGSCVRTWGTTPGSGAQIGTLWGVA 487
Query: 105 VGPDNS-IVVADSSNHRVQVFQSD-GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
V N IVV D +HR+ V+++D G+FV FGS G+ GQ + P +AV +IV+D
Sbjct: 488 VDHANGHIVVTDIYSHRLHVWRADDGSFVRTFGSRGSGPGQFQCPRGVAVDKAGHIIVTD 547
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDSNNHR 221
SNNHRVQ++ R + DG+F+ FGS G GQ + P +AV + T +IV+DS NHR
Sbjct: 548 SNNHRVQVW----RAY--DGSFLRTFGSRGAGPGQFQQPAGVAVDAATGNIIVADSGNHR 601
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP-DGQFLR 280
V ++ +G + +FGS G + Q P GVAVD G + V D GN+R+Q++ DG FLR
Sbjct: 602 VHVWHADGSFVRTFGSRGHGQDQFNSPAGVAVDTAGNVIVADWGNHRVQVWRAYDGSFLR 661
Query: 281 AFGCWGSGDGEFKGLEGVAV-MSNGNILVCDRENHRIQVF 319
FG G G +F GVAV + G+I+V D N R+QV+
Sbjct: 662 TFGSQGGGPAQFNRPTGVAVDAATGHIIVADSSNKRVQVW 701
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 111/189 (58%), Gaps = 16/189 (8%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD---LKTNCVFLA----FT 98
GSRGS PG F PRG+AV I+V DS+NHRVQV + +D L+T A F
Sbjct: 520 GSRGSGPGQFQCPRGVAVDKAGHIIVTDSNNHRVQV-WRAYDGSFLRTFGSRGAGPGQFQ 578
Query: 99 WPRGIAV-GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+AV +I+VADS NHRV V+ +DG+FV FGS G+ Q P +AV
Sbjct: 579 QPAGVAVDAATGNIIVADSGNHRVHVWHADGSFVRTFGSRGHGQDQFNSPAGVAVDTAGN 638
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSD 216
VIV+D NHRVQ++ R + DG+F+ FGS G Q P +AV + T +IV+D
Sbjct: 639 VIVADWGNHRVQVW----RAY--DGSFLRTFGSQGGGPAQFNRPTGVAVDAATGHIIVAD 692
Query: 217 SNNHRVQIF 225
S+N RVQ++
Sbjct: 693 SSNKRVQVW 701
>gi|73671050|ref|YP_307065.1| surface layer protein [Methanosarcina barkeri str. Fusaro]
gi|72398212|gb|AAZ72485.1| putative surface layer protein [Methanosarcina barkeri str. Fusaro]
Length = 752
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 158/290 (54%), Gaps = 15/290 (5%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC-----FPHFDLK 89
+ + + K GS G+ G F +PR I I VADS N+RVQ F +
Sbjct: 55 HAESYKFVTKWGSYGNGAGQFHYPRAIVATSSGYIYVADSGNNRVQEFNSNGKFINQWSS 114
Query: 90 TNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
TN V L G+A+ + VAD+ N+R+ F +G F+ KFGS G+ Q ++
Sbjct: 115 TNDVSLGSV--NGVAIDSSGDVYVADT-NNRIVKFDKNGNFITKFGSYGSGNVQFKNARD 171
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
I + ++ + V+D+ N+R+Q D NG ++ ++GS G+ GQ ++P +A+ +
Sbjct: 172 ICLDSSGNIYVADTGNNRIQKLDNNGN-------YLVQWGSYGSSNGQFKNPIDVALDSL 224
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
+ V V+D +NH ++ FD NG + FG+ G+ +GQ V VD G I V D GN RI
Sbjct: 225 DNVYVADKDNHCIKKFDSNGNYLMQFGNSGNGDGQFNNIISVFVDSSGNIYVSDRGNTRI 284
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
Q F DG +L +G +G+ DG+FK E + V S+GN+ V D +N+RIQ F
Sbjct: 285 QKFDSDGNYLTHWGSYGTNDGQFKNPEDIGVDSSGNVYVADADNNRIQKF 334
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 122/224 (54%), Gaps = 21/224 (9%)
Query: 60 GIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF---------LAFTWPRGIAVGPDNS 110
G+A+ + VAD++N V+ FD N + + F R I + +
Sbjct: 125 GVAIDSSGDVYVADTNNRIVK-----FDKNGNFITKFGSYGSGNVQFKNARDICLDSSGN 179
Query: 111 IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
I VAD+ N+R+Q ++G ++ ++GS G+ GQ ++P +A+ + + V V+D +NH ++
Sbjct: 180 IYVADTGNNRIQKLDNNGNYLVQWGSYGSSNGQFKNPIDVALDSLDNVYVADKDNHCIKK 239
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
FD S+G ++ +FG+ GN GQ + + V ++ + VSD N R+Q FD +G
Sbjct: 240 FD-------SNGNYLMQFGNSGNGDGQFNNIISVFVDSSGNIYVSDRGNTRIQKFDSDGN 292
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+T +GS G+ +GQ K P + VD G + V D+ NNRIQ F P
Sbjct: 293 YLTHWGSYGTNDGQFKNPEDIGVDSSGNVYVADADNNRIQKFAP 336
>gi|326918227|ref|XP_003205392.1| PREDICTED: tripartite motif-containing protein 2-like, partial
[Meleagris gallopavo]
Length = 509
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 156/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQ+
Sbjct: 219 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF 278
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 279 SNDGHFKSRFGIRGRSPGQLQRPTGVAVHPGGDIIIADYDNKWVSIFSSDGKFKAKIGS- 337
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P I+V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 338 ----GKLMGPKGISVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDKQ 386
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ +G I FGS G GQ P GVAVD G
Sbjct: 387 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQDGEFILKFGSNGEGNGQFNAPTGVAVDSNG 446
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 447 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 503
Query: 318 VF 319
V+
Sbjct: 504 VY 505
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
K GS G G F P G+AV + +I+VAD N R+QV FD + FL++
Sbjct: 422 LKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--GSGSFLSYINTSA 475
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH +V++
Sbjct: 476 DPLYGPQGLALTSDGHVVVADSGNHCFKVYR 506
>gi|432847405|ref|XP_004066008.1| PREDICTED: tripartite motif-containing protein 2-like [Oryzias
latipes]
Length = 744
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 157/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y RR L F+IG++G G FT +G+A +++ADS+N VQ+
Sbjct: 454 PASMYSSGRRKENPIEDDLIFRIGTKGRNKGEFTNLQGVAASSLGKVLIADSNNQCVQMF 513
Query: 83 FPHFDLKTNCVFLAFT-----WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ T P G+AV P+ I++AD N V +F S+G F K GS
Sbjct: 514 SNDGQFKSRFGVRGRTPGQLQRPTGVAVHPNGDIIIADYDNKWVSIFSSEGKFKNKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P +AV +IV D+ V IF VNG++ V KFG+ GN Q
Sbjct: 573 ----GKLMGPKGVAVDKNGHIIVVDNKACCVFIFQVNGKL-------VTKFGNRGNGDKQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV+N N +IV+D +NH V++F+ G + FGS G GQ P GV+VD G
Sbjct: 622 FAGPHFAAVNNNNEIIVTDFHNHSVKVFNTEGEFLLKFGSNGEGNGQFNAPTGVSVDANG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
K GS G G F P G++V + +I+VAD N R+QV FD + FL++
Sbjct: 657 LKFGSNGEGNGQFNAPTGVSVDANGNIIVADWGNSRIQV----FDGSGS--FLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH +V++
Sbjct: 711 DPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|432918736|ref|XP_004079641.1| PREDICTED: tripartite motif-containing protein 2-like [Oryzias
latipes]
Length = 667
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 155/297 (52%), Gaps = 22/297 (7%)
Query: 30 TPR--SQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD 87
TPR +Q + L FKIG++G G FT +G+A I++ADS+N VQ+ +
Sbjct: 382 TPRRKTQNPIEDDLIFKIGTKGRNKGEFTNLQGVAASSIGRILIADSNNQCVQIFSNEGE 441
Query: 88 LKTNCVFLAFT-----WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
K+ T P G+AV P I++AD N V +F S+G F K GS G
Sbjct: 442 FKSRFGVRGRTPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFTSEGKFKAKLGS-----G 496
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
+L P ++V VIV D N +F +FQ G + KFGS GN Q PH
Sbjct: 497 RLMGPKGVSVDQNGHVIVVD--NKACTVF-----IFQLTGKLITKFGSRGNGDKQFAGPH 549
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
+ AV+ N +I++D +NH V++F G ++ FGS G GQ P GVAVD G I V
Sbjct: 550 FAAVNKNNEIIITDFHNHSVKVFTPEGELVLKFGSNGEGNGQFNAPTGVAVDTNGNIIVA 609
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +V+
Sbjct: 610 DWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFKVY 663
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 14/94 (14%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT- 98
L K GS G G F P G+AV + +I+VAD N R+QV FD + FL++
Sbjct: 577 ELVLKFGSNGEGNGQFNAPTGVAVDTNGNIIVADWGNSRIQV----FDGSGS--FLSYIN 630
Query: 99 -------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH +V++
Sbjct: 631 TSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 664
>gi|348536230|ref|XP_003455600.1| PREDICTED: tripartite motif-containing protein 2-like [Oreochromis
niloticus]
Length = 671
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 155/297 (52%), Gaps = 22/297 (7%)
Query: 30 TPR--SQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD 87
TPR +Q + L F+IG++G G FT +G+A + I++ADS+N VQ+ +
Sbjct: 386 TPRRKTQNPIEDDLIFRIGTKGRNKGEFTNLQGVAASSNGRILIADSNNQCVQIFTNEGE 445
Query: 88 LKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
K+ P G+AV P I++AD N V +F +G F K GS G
Sbjct: 446 FKSRFGVRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSCEGKFKAKLGS-----G 500
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
+L P ++V VIV D N +F +FQ G + KFGS GN Q PH
Sbjct: 501 RLMGPKGVSVDQNGHVIVVD--NKACTVF-----IFQLTGKLITKFGSRGNGDKQFAGPH 553
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
+ AV+ N +IV+D +NH V++F + G ++ FGS G GQ P GVAVD G I V
Sbjct: 554 FAAVNKNNEIIVTDFHNHSVKVFTLEGELVLKFGSNGEGNGQFNAPTGVAVDINGNIIVA 613
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +V+
Sbjct: 614 DWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFKVY 667
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 14/94 (14%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT- 98
L K GS G G F P G+AV + +I+VAD N R+QV FD + FL++
Sbjct: 581 ELVLKFGSNGEGNGQFNAPTGVAVDINGNIIVADWGNSRIQV----FDGSGS--FLSYIN 634
Query: 99 -------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH +V++
Sbjct: 635 TSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 668
>gi|374855491|dbj|BAL58347.1| NHL repeat containing protein [uncultured candidate division OP1
bacterium]
Length = 325
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 155/306 (50%), Gaps = 45/306 (14%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW---- 99
+ G +GS G F +AV ++ VAD+ NHRVQ FD TN FL TW
Sbjct: 32 QWGKQGSGNGQFNALEAVAVDAQGNVYVADTENHRVQ----KFD--TNGKFL-LTWGSKG 84
Query: 100 --------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS--------------- 136
P GIA+ +N++ VAD+ NHR+Q F + G F+GK+G+
Sbjct: 85 VNNGQFESPGGIALDRENNVYVADTFNHRIQKFDATGKFLGKWGTPCDVQSGKGCVDPDG 144
Query: 137 ---MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
+ GQ P IA + V+D+ NHRVQ FD G+ F+G FGS G+
Sbjct: 145 PGPLKLGDGQFNFPIGIAFDKDGNLYVTDAFNHRVQKFDPTGK-------FLGSFGSFGS 197
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
GQ IA+ + VSD+ N RVQ FD GR + FG G++ Q+ P VA+
Sbjct: 198 GDGQFNVTAGIAIDTEGNLYVSDNKNDRVQKFDPTGRFLGKFGGPGTDTHQMNRPYHVAI 257
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
D + V D G++R+Q+F G + +G GSG GEF+ L+G+A+ N + + D +N
Sbjct: 258 DSSQRLYVTDQGHHRVQVFDTRGNLITLWGKEGSGPGEFQFLKGIAIYQN-FVYIADSDN 316
Query: 314 HRIQVF 319
HR+Q F
Sbjct: 317 HRVQKF 322
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 111/208 (53%), Gaps = 25/208 (12%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
FV ++G G+ GQ +AV V V+D+ NHRVQ FD NG+ F+ +G
Sbjct: 29 FVTQWGKQGSGNGQFNALEAVAVDAQGNVYVADTENHRVQKFDTNGK-------FLLTWG 81
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGS--------- 240
S G GQ E P IA+ N V V+D+ NHR+Q FD G+ + +G+
Sbjct: 82 SKGVNNGQFESPGGIALDRENNVYVADTFNHRIQKFDATGKFLGKWGTPCDVQSGKGCVD 141
Query: 241 ---------EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+GQ FP G+A D G + V D+ N+R+Q F P G+FL +FG +GSGDG+
Sbjct: 142 PDGPGPLKLGDGQFNFPIGIAFDKDGNLYVTDAFNHRVQKFDPTGKFLGSFGSFGSGDGQ 201
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G+A+ + GN+ V D +N R+Q F
Sbjct: 202 FNVTAGIAIDTEGNLYVSDNKNDRVQKF 229
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---- 95
R K G G++ P +A+ + V D +HRVQV FD + N + L
Sbjct: 234 RFLGKFGGPGTDTHQMNRPYHVAIDSSQRLYVTDQGHHRVQV----FDTRGNLITLWGKE 289
Query: 96 -----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
F + +GIA+ N + +ADS NHRVQ FQ
Sbjct: 290 GSGPGEFQFLKGIAI-YQNFVYIADSDNHRVQKFQ 323
>gi|381388750|ref|NP_001244243.1| tripartite motif-containing protein 2 [Gallus gallus]
Length = 744
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 155/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 514 SNDGHFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKAKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P I+V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGISVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDKQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G I FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFILKFGSNGEGNGQFNAPTGVAVDSNG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 651 QEGEFILKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 704
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 705 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|348524478|ref|XP_003449750.1| PREDICTED: tripartite motif-containing protein 2-like [Oreochromis
niloticus]
Length = 744
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 157/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y RR L F+IG++G G FT +G+A +++ADS+N VQ+
Sbjct: 454 PASMYSTGRRKENPIEDDLIFRIGTKGRNKGEFTNLQGVAASSQGKVLIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLAFT-----WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
++ T P G+AV P+ I++AD N V +F S+G F K G+
Sbjct: 514 SNDGQFRSRFGIRGRTPGQLQRPTGVAVHPNGDIIIADYDNKWVSIFSSEGKFKNKIGT- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D+ + V IF VNG+ V KFG+ GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVDNKSCCVFIFQVNGK-------LVTKFGNRGNGDRQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV+N N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNNNNEIIVTDFHNHSVKVFNTEGEFLLKFGSNGEGNGQFNAPTGVAVDVNG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
K GS G G F P G+AV + +I+VAD N R+QV FD + FL++
Sbjct: 657 LKFGSNGEGNGQFNAPTGVAVDVNGNIIVADWGNSRIQV----FDGSGS--FLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH +V++
Sbjct: 711 DPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|292621594|ref|XP_686295.3| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Danio
rerio]
Length = 754
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 155/297 (52%), Gaps = 22/297 (7%)
Query: 29 TTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP---H 85
TT + + + L F++G+RG E G F+ +GI+ IVVADS+N +QV F
Sbjct: 470 TTKKKENPIEDELIFRVGTRGRERGEFSNLQGISTTSSGRIVVADSNNQCIQV-FSNDGQ 528
Query: 86 FDLKTNCVFLA---FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
F LK + P G+AV + I+VAD N + +F DG F K G AG
Sbjct: 529 FKLKFGVRGRSPGQLQRPTGVAVDMNGDIIVADYDNRWLSIFSPDGKFKNKIG-----AG 583
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
+L P +AV +I +D N +F +FQS+G V KFG+ G Q PH
Sbjct: 584 RLMGPKGVAVDKNGHIITAD--NKACCVF-----IFQSNGKLVTKFGAKGTSERQFAGPH 636
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
++A++N N ++V+D +NH V++++ +G + FGS G GQ P GVAVD G I V
Sbjct: 637 FVAINNKNEIVVTDFHNHSVKVYNADGEFLFKFGSHGEGNGQFNAPTGVAVDGNGNIIVA 696
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D GN+RIQ+F G FL G +G+A+ S+G++ V D NH +V+
Sbjct: 697 DWGNSRIQVFDSSGSFLSYINTTAD---PLYGPQGLALTSDGHVAVADSGNHCFKVY 750
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 667 FKFGSHGEGNGQFNAPTGVAVDGNGNIIVADWGNSRIQV----FD--SSGSFLSYINTTA 720
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D + VADS NH +V++
Sbjct: 721 DPLYGPQGLALTSDGHVAVADSGNHCFKVYR 751
>gi|440798594|gb|ELR19661.1| Bbox zinc finger domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 688
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/277 (39%), Positives = 153/277 (55%), Gaps = 24/277 (8%)
Query: 58 PRGIAVG-PDNSIVVADSSNHRVQV-------CFPHFDLKTNCVFLAFTWPRGIAV-GPD 108
P G+AV IVVAD + +V + C + + WP G+AV +
Sbjct: 419 PCGVAVDVAAGHIVVADCGSRQVHLRRADDGSCVRTLEAPGS---AQLRWPWGVAVDAAE 475
Query: 109 NSIVVADSSNHRVQVFQS-DGTFVGKFGSMGNKAGQLEHPHYIAVSNT-NRVIVSDSNNH 166
IVV D NHRV V+++ DGTFV FGS G+ Q + P +AV + V+D NH
Sbjct: 476 GHIVVTDHGNHRVHVWRAGDGTFVRTFGSRGSGPAQFQCPRGVAVDEAAGHIFVADHFNH 535
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDSNNHRVQIF 225
RVQ++ +DG+F+G FGS G GQ + P +AV + T VIV+DS NHRVQ++
Sbjct: 536 RVQVWHA------TDGSFLGSFGSEGVGPGQFQQPTGVAVDAATGNVIVADSGNHRVQVW 589
Query: 226 DV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQ-GYISVGDSGNNRIQIFTPDGQFLRAFG 283
+G + +FGS G GQ P GVAVD G I V D GN+R+Q++ DG +LRAFG
Sbjct: 590 RAGDGSFVRTFGSRGRGRGQFMCPEGVAVDAATGNIIVADWGNHRVQVWRADGAYLRAFG 649
Query: 284 CWGSGDGEFKGLEGVAV-MSNGNILVCDRENHRIQVF 319
G+G +F VAV + G+++V D N R+QV+
Sbjct: 650 SAGAGPAQFNSPLAVAVDPATGHVVVVDSGNKRVQVW 686
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 125/230 (54%), Gaps = 18/230 (7%)
Query: 55 FTWPRGIAV-GPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTWPRGIAVG- 106
WP G+AV + IVV D NHRV V F F PRG+AV
Sbjct: 463 LRWPWGVAVDAAEGHIVVTDHGNHRVHVWRAGDGTFVRTFGSRGSGPAQFQCPRGVAVDE 522
Query: 107 PDNSIVVADSSNHRVQVFQ-SDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDSN 164
I VAD NHRVQV+ +DG+F+G FGS G GQ + P +AV + T VIV+DS
Sbjct: 523 AAGHIFVADHFNHRVQVWHATDGSFLGSFGSEGVGPGQFQQPTGVAVDAATGNVIVADSG 582
Query: 165 NHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDSNNHRVQ 223
NHRVQ++ DG+FV FGS G GQ P +AV + T +IV+D NHRVQ
Sbjct: 583 NHRVQVWRAG------DGSFVRTFGSRGRGRGQFMCPEGVAVDAATGNIIVADWGNHRVQ 636
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ-GYISVGDSGNNRIQIF 272
++ +G + +FGS G+ Q P VAVD G++ V DSGN R+Q++
Sbjct: 637 VWRADGAYLRAFGSAGAGPAQFNSPLAVAVDPATGHVVVVDSGNKRVQVW 686
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 105/196 (53%), Gaps = 28/196 (14%)
Query: 46 GSRGSEPGCFTWPRGIAVG-PDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------- 96
GSRGS P F PRG+AV I VAD NHRVQV T+ FL
Sbjct: 503 GSRGSGPAQFQCPRGVAVDEAAGHIFVADHFNHRVQVWH-----ATDGSFLGSFGSEGVG 557
Query: 97 ---FTWPRGIAV-GPDNSIVVADSSNHRVQVFQS-DGTFVGKFGSMGNKAGQLEHPHYIA 151
F P G+AV +++VADS NHRVQV+++ DG+FV FGS G GQ P +A
Sbjct: 558 PGQFQQPTGVAVDAATGNVIVADSGNHRVQVWRAGDGSFVRTFGSRGRGRGQFMCPEGVA 617
Query: 152 V-SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 209
V + T +IV+D NHRVQ V+++DG ++ FGS G Q P +AV T
Sbjct: 618 VDAATGNIIVADWGNHRVQ-------VWRADGAYLRAFGSAGAGPAQFNSPLAVAVDPAT 670
Query: 210 NRVIVSDSNNHRVQIF 225
V+V DS N RVQ++
Sbjct: 671 GHVVVVDSGNKRVQVW 686
>gi|62122935|ref|NP_001014393.1| tripartite motif-containing protein 2 [Danio rerio]
gi|61402577|gb|AAH91789.1| Zgc:113099 [Danio rerio]
Length = 744
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 151/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F+IG++G G FT +G+A +++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRIGTKGRNKGEFTNLQGVAASSVGKVLIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K P G+AV P I++AD N V +F SDG F K GS
Sbjct: 514 LNDGQFKGRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKSKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V KFG+ GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKSCCVF-----IFQPNGKLVSKFGNRGNSDKQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV+ N VIV+D +NH V++F G I FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNQNNEVIVTDFHNHSVKVFSPEGEFILKFGSNGEGNGQFNAPTGVAVDANG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDSSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 132/262 (50%), Gaps = 15/262 (5%)
Query: 16 LQTLLVSGIGQVGTTPRSQ-----YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIV 70
LQ + S +G+V + +L + + + G RG PG P G+AV P I+
Sbjct: 489 LQGVAASSVGKVLIADSNNQCVQIFLNDGQFKGRFGIRGRSPGQLQRPTGVAVHPSGDII 548
Query: 71 VADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTF 130
+AD N V + K+ P+G++V + I+V D+ + V +FQ +G
Sbjct: 549 IADYDNKWVSIFSSDGKFKSKIGSGKLMGPKGVSVDRNGHIIVVDNKSCCVFIFQPNGKL 608
Query: 131 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGS 190
V KFG+ GN Q PH+ AV+ N VIV+D +NH V +VF +G F+ KFGS
Sbjct: 609 VSKFGNRGNSDKQFAGPHFAAVNQNNEVIVTDFHNHSV-------KVFSPEGEFILKFGS 661
Query: 191 MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRG 250
G GQ P +AV +IV+D N R+Q+FD +G ++ + L P+G
Sbjct: 662 NGEGNGQFNAPTGVAVDANGNIIVADWGNSRIQVFDSSGSFLSYINTSADP---LYGPQG 718
Query: 251 VAVDDQGYISVGDSGNNRIQIF 272
+A+ G++ V DSGN+ +++
Sbjct: 719 LALTSDGHVVVADSGNHCFKVY 740
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
K GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 LKFGSNGEGNGQFNAPTGVAVDANGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH +V++
Sbjct: 711 DPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|449266608|gb|EMC77650.1| Tripartite motif-containing protein 2, partial [Columba livia]
Length = 755
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 155/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQ+
Sbjct: 465 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF 524
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 525 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKAKIGS- 583
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 584 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDKQ 632
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G I FGS G GQ P GVAVD G
Sbjct: 633 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFILKFGSNGEGNGQFNAPTGVAVDSNG 692
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 693 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 749
Query: 318 VF 319
V+
Sbjct: 750 VY 751
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 662 QEGEFILKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 715
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 716 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 752
>gi|292609498|ref|XP_686306.4| PREDICTED: tripartite motif-containing protein 2 [Danio rerio]
Length = 708
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 150/284 (52%), Gaps = 20/284 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F+IG++G G FT +G+A + I++ADS+N VQ+ + ++
Sbjct: 436 LIFRIGTKGRNKGEFTNLQGVAACSEGRILIADSNNQCVQIFSNTGEFQSRFGVRGRSPG 495
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV P+ I++AD N V +F S+G + K GS G+L P ++V
Sbjct: 496 QLQRPTGVAVHPNGDIIIADYDNKWVSIFSSEGKYKAKLGS-----GRLMGPKGVSVDQN 550
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
VIV D N +F +FQ G + KFGS GN Q PH+ AV+N N +I++
Sbjct: 551 GHVIVVD--NKACTVF-----IFQPSGKLITKFGSRGNGDRQFAGPHFAAVNNNNEIIIT 603
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V++F+ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 604 DFHNHSVKVFNADGEFLLKFGSNGEGNGQFNAPTGVAVDVNGNIIVADWGNSRIQVFDGS 663
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL + G +G+A+ S+G+++V D NH +V+
Sbjct: 664 GSFLSYI---NTAADPLYGPQGLALTSDGHVVVADSGNHCFKVY 704
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 14/200 (7%)
Query: 120 RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ 179
RV + D F + G+ G G+ + +A + R++++DSNN VQI F
Sbjct: 428 RVNPIEDDLIF--RIGTKGRNKGEFTNLQGVAACSEGRILIADSNNQCVQI-------FS 478
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
+ G F +FG G GQL+ P +AV +I++D +N V IF G+ GS
Sbjct: 479 NTGEFQSRFGVRGRSPGQLQRPTGVAVHPNGDIIIADYDNKWVSIFSSEGKYKAKLGS-- 536
Query: 240 SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVA 299
G+L P+GV+VD G++ V D+ + IF P G+ + FG G+GD +F G A
Sbjct: 537 ---GRLMGPKGVSVDQNGHVIVVDNKACTVFIFQPSGKLITKFGSRGNGDRQFAGPHFAA 593
Query: 300 VMSNGNILVCDRENHRIQVF 319
V +N I++ D NH ++VF
Sbjct: 594 VNNNNEIIITDFHNHSVKVF 613
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---- 95
+L K GSRG+ F P AV +N I++ D NH V+V + FL
Sbjct: 571 KLITKFGSRGNGDRQFAGPHFAAVNNNNEIIITDFHNHSVKV------FNADGEFLLKFG 624
Query: 96 -------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
F P G+AV + +I+VAD N R+QVF G+F+ + A L P
Sbjct: 625 SNGEGNGQFNAPTGVAVDVNGNIIVADWGNSRIQVFDGSGSFLSYINTA---ADPLYGPQ 681
Query: 149 YIAVSNTNRVIVSDSNNHRVQIF 171
+A+++ V+V+DS NH +++
Sbjct: 682 GLALTSDGHVVVADSGNHCFKVY 704
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC--FPHFDLKTNCVFLAFTWP 100
K GS G G F P G+AV + +I+VAD N R+QV F N P
Sbjct: 621 LKFGSNGEGNGQFNAPTGVAVDVNGNIIVADWGNSRIQVFDGSGSFLSYINTAADPLYGP 680
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
+G+A+ D +VVADS NH +V++
Sbjct: 681 QGLALTSDGHVVVADSGNHCFKVYR 705
>gi|432896009|ref|XP_004076255.1| PREDICTED: tripartite motif-containing protein 3-like [Oryzias
latipes]
Length = 752
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 157/297 (52%), Gaps = 22/297 (7%)
Query: 29 TTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP---H 85
TT + + + L +++GSRG E G FT +GI+ + +VVADS+N +QV F
Sbjct: 468 TTKKKENPIEDELIYRVGSRGREKGEFTNLQGISASSNGRVVVADSNNQCIQV-FSNDGQ 526
Query: 86 FDLKTNCVFLA---FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
F ++ + P G+ V + IVVAD N V +F SDG F K G AG
Sbjct: 527 FKMRFGVRGRSPGQLQRPTGVTVDMNGDIVVADYDNRWVSIFGSDGKFKNKIG-----AG 581
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
+L P +AV +I D N +F +FQS+G V KFG G Q PH
Sbjct: 582 RLMGPKGVAVDKNGHIITVD--NKACCVF-----IFQSNGKLVTKFGGRGTTDRQFAGPH 634
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
++AV+N N +IV+D +NH V++++ +G + FGS G GQ P GVAVD G I V
Sbjct: 635 FVAVNNKNEIIVTDFHNHSVKVYNADGEFLFKFGSHGEGNGQFNAPTGVAVDANGNIIVA 694
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D GN+RIQ+F G FL S D + G +G+A+ S+G++ V D NH +V+
Sbjct: 695 DWGNSRIQVFDSTGSFLSYIN--TSADPLY-GPQGLALTSDGHVAVADSGNHCFKVY 748
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD + FL++
Sbjct: 665 FKFGSHGEGNGQFNAPTGVAVDANGNIIVADWGNSRIQV----FD--STGSFLSYINTSA 718
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D + VADS NH +V++
Sbjct: 719 DPLYGPQGLALTSDGHVAVADSGNHCFKVYR 749
>gi|224049634|ref|XP_002198438.1| PREDICTED: tripartite motif-containing protein 2 [Taeniopygia
guttata]
Length = 744
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 156/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F+IG++G G FT +G+A + I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRIGTKGRNKGEFTNLQGVAACTNGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P+ I++AD N V +F SDG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPNGDIIIADYDNKWVSIFSSDGKFKAKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDKQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 704
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 705 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|149698139|ref|XP_001501223.1| PREDICTED: tripartite motif-containing protein 2 [Equus caballus]
Length = 744
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 155/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G I FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFILKFGSNGEGNGQFNAPTGVAVDSNG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 651 QEGEFILKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 704
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 705 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|374855656|dbj|BAL58511.1| NHL repeat containing protein [uncultured candidate division OP1
bacterium]
Length = 419
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 141/285 (49%), Gaps = 24/285 (8%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
K G+RG+ F +A+ S+ V D RVQ ++ FL
Sbjct: 143 KWGTRGAGEAQFNGVSHLALDGRGSVYVTDFGLDRVQ------KFTSDGKFLVQWGGRGS 196
Query: 97 ----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
T P GIAV + VAD+ N RVQ F G FV K+GS+G GQ P +A
Sbjct: 197 GNGQLTGPLGIAVDFQGFVYVADAGNQRVQKFTEGGAFVAKWGSLGTGEGQFSFPTGVAT 256
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
V V+D N+R+Q F G + ++G+ G Q P+ IAVSN V
Sbjct: 257 DPAGNVYVADKVNNRIQ-------KFSPTGVLIARWGTFGQAESQFNSPNDIAVSNQGIV 309
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V D+ N RVQ F +G + +GS G +GQ + P G+AVD G++ V D+GN+RIQ F
Sbjct: 310 YVLDTGNGRVQKFMADGSYLGQWGSLGERDGQFQAPLGIAVDTYGFVYVADTGNDRIQKF 369
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
+ DG F+ +G G+GDG+F +AV G I V + NHRIQ
Sbjct: 370 SSDGAFIIKWGSLGAGDGQFDQPVDLAVDPEGVIYVAEEGNHRIQ 414
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 114/217 (52%), Gaps = 7/217 (3%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+A+ S+ V D RVQ F SDG F+ ++G G+ GQL P IAV V V+D
Sbjct: 160 LALDGRGSVYVTDFGLDRVQKFTSDGKFLVQWGGRGSGNGQLTGPLGIAVDFQGFVYVAD 219
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
+ N RVQ F G FV K+GS+G GQ P +A V V+D N+R+
Sbjct: 220 AGNQRVQ-------KFTEGGAFVAKWGSLGTGEGQFSFPTGVATDPAGNVYVADKVNNRI 272
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q F G +I +G+ G E Q P +AV +QG + V D+GN R+Q F DG +L +
Sbjct: 273 QKFSPTGVLIARWGTFGQAESQFNSPNDIAVSNQGIVYVLDTGNGRVQKFMADGSYLGQW 332
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G DG+F+ G+AV + G + V D N RIQ F
Sbjct: 333 GSLGERDGQFQAPLGIAVDTYGFVYVADTGNDRIQKF 369
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 97/189 (51%), Gaps = 7/189 (3%)
Query: 131 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGS 190
+GK+G+ G Q ++A+ V V+D RVQ F SDG F+ ++G
Sbjct: 141 LGKWGTRGAGEAQFNGVSHLALDGRGSVYVTDFGLDRVQ-------KFTSDGKFLVQWGG 193
Query: 191 MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRG 250
G+ GQL P IAV V V+D+ N RVQ F G + +GS G+ EGQ FP G
Sbjct: 194 RGSGNGQLTGPLGIAVDFQGFVYVADAGNQRVQKFTEGGAFVAKWGSLGTGEGQFSFPTG 253
Query: 251 VAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
VA D G + V D NNRIQ F+P G + +G +G + +F +AV + G + V D
Sbjct: 254 VATDPAGNVYVADKVNNRIQKFSPTGVLIARWGTFGQAESQFNSPNDIAVSNQGIVYVLD 313
Query: 311 RENHRIQVF 319
N R+Q F
Sbjct: 314 TGNGRVQKF 322
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%)
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
V+ +G+ G+ E Q +A+D +G + V D G +R+Q FT DG+FL +G GSG+G
Sbjct: 140 VLGKWGTRGAGEAQFNGVSHLALDGRGSVYVTDFGLDRVQKFTSDGKFLVQWGGRGSGNG 199
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ G G+AV G + V D N R+Q F
Sbjct: 200 QLTGPLGIAVDFQGFVYVADAGNQRVQKF 228
>gi|224097071|ref|XP_002189972.1| PREDICTED: tripartite motif-containing protein 3-like [Taeniopygia
guttata]
Length = 342
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 154/308 (50%), Gaps = 20/308 (6%)
Query: 17 QTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSN 76
Q L G+ R + + L F++GSRG E G FT +GI+ IVVADS+N
Sbjct: 46 QKALRRPASMYGSAKRKENPIEGELIFRVGSRGREKGEFTNLQGISTSSAGRIVVADSNN 105
Query: 77 HRVQVCF--PHFDLKTNCVFLA---FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV 131
VQV F L+ + P G++V + I+VAD N V VF +G F
Sbjct: 106 QCVQVFSNEGQFRLRFGVRGRSPGQLQRPTGVSVDTNGDIIVADYDNRWVSVFSPEGKFK 165
Query: 132 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM 191
K G AG+L P +AV +IV D N +F +FQ +G V +FGS
Sbjct: 166 TKLG-----AGRLMGPKGVAVDRNGHIIVVD--NKACCVF-----IFQPNGKLVARFGSR 213
Query: 192 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGV 251
G Q PH++AV+N N ++V+D +NH V++++ G + FGS G GQ P GV
Sbjct: 214 GTAERQFAGPHFVAVNNKNEIVVTDFHNHSVKVYNAEGEFLFKFGSHGEGNGQFNAPTGV 273
Query: 252 AVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDR 311
AVD G I V D GN+RIQ+F G FL G +G+A+ S+G+++V D
Sbjct: 274 AVDSNGNIIVADWGNSRIQVFDSAGSFLSYINTAAD---PLYGPQGLALTSDGHVVVADS 330
Query: 312 ENHRIQVF 319
NH + +
Sbjct: 331 GNHCFKAY 338
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNC 92
Y + FK GS G G F P G+AV + +I+VAD N R+QV F N
Sbjct: 247 YNAEGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSAGSFLSYINT 306
Query: 93 VFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH + ++
Sbjct: 307 AADPLYGPQGLALTSDGHVVVADSGNHCFKAYR 339
>gi|73667964|ref|YP_303979.1| hypothetical protein Mbar_A0416 [Methanosarcina barkeri str.
Fusaro]
gi|72395126|gb|AAZ69399.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 346
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 132/223 (59%), Gaps = 7/223 (3%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G+AV ++ V D+ NHR+Q F S G ++ ++GS G Q P+ +AV ++
Sbjct: 50 FACPTGVAVDSSGNVYVTDTGNHRIQKFNSTGGYLTQWGSNGTDNRQFFLPYGVAVDSSG 109
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
V V+D N +Q F+ S+G + ++GS GN GQ + +AV ++ V V+D
Sbjct: 110 NVYVADKGNKCIQKFN-------SNGGHLTQWGSSGNGNGQFYFLNGVAVDSSGNVYVAD 162
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
S N+R+Q F+ NG +T +GS GS GQ P GVAVD G + V DSGNNRIQ F G
Sbjct: 163 SGNNRIQKFNSNGGYLTQWGSYGSGNGQFNDPEGVAVDSSGNVYVADSGNNRIQKFNSTG 222
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+L +G +GSG+G+F+ +AV S+GN+ V D+ N RIQ F
Sbjct: 223 GYLTQWGSYGSGNGQFEFPLSIAVDSSGNVYVADKYNQRIQKF 265
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 158/307 (51%), Gaps = 30/307 (9%)
Query: 30 TPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
+ + Y + K GS GS G F P G+AV ++ V D+ NHR+Q
Sbjct: 25 SASATYAETYNFVTKWGSYGSGSGQFACPTGVAVDSSGNVYVTDTGNHRIQ------KFN 78
Query: 90 TNCVFLA-----------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
+ +L F P G+AV ++ VAD N +Q F S+G + ++GS G
Sbjct: 79 STGGYLTQWGSNGTDNRQFFLPYGVAVDSSGNVYVADKGNKCIQKFNSNGGHLTQWGSSG 138
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
N GQ + +AV ++ V V+DS N+R+Q F+ S+G ++ ++GS G+ GQ
Sbjct: 139 NGNGQFYFLNGVAVDSSGNVYVADSGNNRIQKFN-------SNGGYLTQWGSYGSGNGQF 191
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
P +AV ++ V V+DS N+R+Q F+ G +T +GS GS GQ +FP +AVD G
Sbjct: 192 NDPEGVAVDSSGNVYVADSGNNRIQKFNSTGGYLTQWGSYGSGNGQFEFPLSIAVDSSGN 251
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF---KGL---EGVAVMSNGNILVCDRE 312
+ V D N RIQ F G++L +G G+ + + G+ GVAV S+GN+ V +
Sbjct: 252 VYVADKYNQRIQKFNSIGRYLTQWGSNGTDNRQIYDPNGIYDPNGVAVDSSGNVYVAETG 311
Query: 313 NHRIQVF 319
RIQ F
Sbjct: 312 YSRIQKF 318
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 132/249 (53%), Gaps = 30/249 (12%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
+ GS G++ F P G+AV ++ VAD N +Q +N L
Sbjct: 86 QWGSNGTDNRQFFLPYGVAVDSSGNVYVADKGNKCIQ------KFNSNGGHLTQWGSSGN 139
Query: 97 ----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
F + G+AV ++ VADS N+R+Q F S+G ++ ++GS G+ GQ P +AV
Sbjct: 140 GNGQFYFLNGVAVDSSGNVYVADSGNNRIQKFNSNGGYLTQWGSYGSGNGQFNDPEGVAV 199
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
++ V V+DS N+R+Q F+ S G ++ ++GS G+ GQ E P IAV ++ V
Sbjct: 200 DSSGNVYVADSGNNRIQKFN-------STGGYLTQWGSYGSGNGQFEFPLSIAVDSSGNV 252
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRG------VAVDDQGYISVGDSGN 266
V+D N R+Q F+ GR +T +GS G++ Q+ P G VAVD G + V ++G
Sbjct: 253 YVADKYNQRIQKFNSIGRYLTQWGSNGTDNRQIYDPNGIYDPNGVAVDSSGNVYVAETGY 312
Query: 267 NRIQIFTPD 275
+RIQ F P+
Sbjct: 313 SRIQKFAPN 321
>gi|147918859|ref|YP_687415.1| hypothetical protein RRC374 [Methanocella arvoryzae MRE50]
gi|110622811|emb|CAJ38089.1| hypothetical protein RRC374 [Methanocella arvoryzae MRE50]
Length = 514
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 149/293 (50%), Gaps = 20/293 (6%)
Query: 36 LQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL 95
L IGSRG PG F P IAV +I VAD+ N R+QV ++ TN
Sbjct: 113 LNTTPYWTTIGSRGDGPGEFYRPHAIAVDGAGNIYVADTFNDRIQV----WNKATNTWTT 168
Query: 96 A---------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH 146
F+ PRGIAV +I VAD+ N+R+QV+ GS G + GQ +
Sbjct: 169 TGSPDDDPGQFSSPRGIAVDGAGNIYVADTYNYRIQVWNKTTNTWTIIGSDGTEPGQFDR 228
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
P IAV +T + V D+ N R+Q+++ ++D T++ GS G + GQ P IAV
Sbjct: 229 PFGIAVDDTGNIYVLDTFNDRIQVWN------KTDNTWI-SMGSNGTEPGQFYEPKGIAV 281
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
+ V+D+ N+R+Q+++ T+ GS G + G+ P+ +AVDD G I V D N
Sbjct: 282 DGAGNIYVADTLNYRIQVWNKATNTWTTMGSNGIQPGEFYEPKDIAVDDAGNIYVADDYN 341
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+RIQ++ G G GEF G+AV GNI V D NHRIQV+
Sbjct: 342 HRIQVWNKTTNTWTTMGSNGIQPGEFDRPRGIAVDGRGNIYVSDSYNHRIQVW 394
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 97/193 (50%), Gaps = 22/193 (11%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------- 96
IGS G+EPG F P GIAV +I V D+ N R+QV KT+ +++
Sbjct: 216 IGSDGTEPGQFDRPFGIAVDDTGNIYVLDTFNDRIQVWN-----KTDNTWISMGSNGTEP 270
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F P+GIAV +I VAD+ N+R+QV+ GS G + G+ P IAV +
Sbjct: 271 GQFYEPKGIAVDGAGNIYVADTLNYRIQVWNKATNTWTTMGSNGIQPGEFYEPKDIAVDD 330
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ V+D NHR+Q V+ GS G + G+ + P IAV + V
Sbjct: 331 AGNIYVADDYNHRIQ-------VWNKTTNTWTTMGSNGIQPGEFDRPRGIAVDGRGNIYV 383
Query: 215 SDSNNHRVQIFDV 227
SDS NHR+Q+++V
Sbjct: 384 SDSYNHRIQVWNV 396
>gi|302036773|ref|YP_003797095.1| hypothetical protein NIDE1420 [Candidatus Nitrospira defluvii]
gi|190343188|gb|ACE75576.1| putative NHL repeat protein [Candidatus Nitrospira defluvii]
gi|300604837|emb|CBK41169.1| protein of unknown function, contains NHL repeats [Candidatus
Nitrospira defluvii]
Length = 989
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 153/312 (49%), Gaps = 22/312 (7%)
Query: 20 LVSGIGQVGTTPRSQYLQKRRLQFKI----GSRGSEPGCFTWPRGIAVGPDNSIVVADSS 75
+V+ + Q G +P SQ + + I G G E G F+ P GIAV D +I VAD+
Sbjct: 130 VVTVVTQKGESPESQEVMAIPAPYLIAKVIGQEGVEDGEFSSPTGIAVDKDGNIYVADTD 189
Query: 76 NHRVQVC------FPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGT 129
NH +Q + + F +PRG+ D + VAD+ N+RVQ F +DG
Sbjct: 190 NHSIQKFDKDGKFLGRWGGEAGSAEGGFYYPRGLTTNSDGQVYVADTGNNRVQRFDTDGN 249
Query: 130 FV---GKFGSM--GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTF 184
+ GKFG G + + P + + V+D+NN R+Q F+ DGT
Sbjct: 250 PMKAWGKFGFAWRGADMNKFDAPWGVTTDQDGNIYVTDTNNARIQ-------KFKGDGTP 302
Query: 185 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQ 244
+ K+G G+ G P +AV V+D N+R+Q FD G +T +G EGS GQ
Sbjct: 303 LLKWGRDGSFDGAFFFPRGVAVDFVGNTYVADEGNNRIQKFDTRGSFLTKWGREGSGPGQ 362
Query: 245 LKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNG 304
K P GV D G + V D GN+RIQ F +G FL A+G G +G+ GVAV G
Sbjct: 363 FKAPWGVTCDALGNVYVVDQGNHRIQKFDGNGTFLCAWGNRGKTEGQLNFPSGVAVDKEG 422
Query: 305 NILVCDRENHRI 316
+ V D NHR+
Sbjct: 423 AVYVVDSGNHRV 434
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 124/224 (55%), Gaps = 3/224 (1%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ-LEHPHYIAVSNT 155
F+ P GIAV D +I VAD+ NH +Q F DG F+G++G A +P + ++
Sbjct: 169 FSSPTGIAVDKDGNIYVADTDNHSIQKFDKDGKFLGRWGGEAGSAEGGFYYPRGLTTNSD 228
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+V V+D+ N+RVQ FD +G ++ G F F G + + P + + V+
Sbjct: 229 GQVYVADTGNNRVQRFDTDGNPMKAWGKF--GFAWRGADMNKFDAPWGVTTDQDGNIYVT 286
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D+NN R+Q F +G + +G +GS +G FPRGVAVD G V D GNNRIQ F
Sbjct: 287 DTNNARIQKFKGDGTPLLKWGRDGSFDGAFFFPRGVAVDFVGNTYVADEGNNRIQKFDTR 346
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL +G GSG G+FK GV + GN+ V D+ NHRIQ F
Sbjct: 347 GSFLTKWGREGSGPGQFKAPWGVTCDALGNVYVVDQGNHRIQKF 390
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 121/239 (50%), Gaps = 25/239 (10%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF----LAFTW----------P 100
F +PRG+ D + VAD+ N+RVQ FD N + F W P
Sbjct: 217 FYYPRGLTTNSDGQVYVADTGNNRVQ----RFDTDGNPMKAWGKFGFAWRGADMNKFDAP 272
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+ D +I V D++N R+Q F+ DGT + K+G G+ G P +AV V
Sbjct: 273 WGVTTDQDGNIYVTDTNNARIQKFKGDGTPLLKWGRDGSFDGAFFFPRGVAVDFVGNTYV 332
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+D N+R+Q FD G +F+ K+G G+ GQ + P + V V D NH
Sbjct: 333 ADEGNNRIQKFDTRG-------SFLTKWGREGSGPGQFKAPWGVTCDALGNVYVVDQGNH 385
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
R+Q FD NG + ++G+ G EGQL FP GVAVD +G + V DSGN+R+ + P + L
Sbjct: 386 RIQKFDGNGTFLCAWGNRGKTEGQLNFPSGVAVDKEGAVYVVDSGNHRVIKYVPTDEEL 444
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 143/286 (50%), Gaps = 37/286 (12%)
Query: 60 GIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---------FTWPRGIAVGPDNS 110
G+A+ SI V D+ N+R+Q FD N + L F P GIA
Sbjct: 686 GLAIDQQGSIFVVDNGNNRIQ----KFDRTGNFIILWGNFGAANANFHNPTGIACDAKGD 741
Query: 111 IVVADSSNHRVQVFQSD-GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI-VSDSNNHRV 168
+ V D++NHRVQ F G ++ KFGS GN GQ P IA+ I V DS N RV
Sbjct: 742 VYVVDTNNHRVQKFDGKLGGYLMKFGSRGNGEGQFNAPWGIAIDRVRGYIYVVDSANFRV 801
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSNNHRVQIFDV 227
Q FD++G F+ +GS GN GQ P IAV + V V D NHRVQ FD
Sbjct: 802 QKFDMSGE-------FIMSWGSFGNGDGQFYFPRGIAVDQADGTVYVVDMGNHRVQKFDT 854
Query: 228 NGRV----ITSFGSE----------GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
+ V +T +G E GQL+ P G+AVD QG + V D+GN+R++ F
Sbjct: 855 STNVLPQLLTKWGGSSEAGHASSPLAQEAGQLRSPWGIAVDGQGDVYVTDTGNHRVEKFD 914
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G F+ +G +G GDG+F G+ V S G++ D N R+Q F
Sbjct: 915 REGNFIAQWGGFGGGDGQFNFPYGIVVDSRGSVFAVDSGNTRVQQF 960
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 118/251 (47%), Gaps = 29/251 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF-------- 97
G+ G+ F P GIA + V D++NHRVQ FD K + F
Sbjct: 719 GNFGAANANFHNPTGIACDAKGDVYVVDTNNHRVQ----KFDGKLGGYLMKFGSRGNGEG 774
Query: 98 --TWPRGIAVGP-DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
P GIA+ I V DS+N RVQ F G F+ +GS GN GQ P IAV
Sbjct: 775 QFNAPWGIAIDRVRGYIYVVDSANFRVQKFDMSGEFIMSWGSFGNGDGQFYFPRGIAVDQ 834
Query: 155 TN-RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG----------SMGNKAGQLEHPHY 203
+ V V D NHRVQ FD + V + K+G + +AGQL P
Sbjct: 835 ADGTVYVVDMGNHRVQKFDTSTNVLPQ---LLTKWGGSSEAGHASSPLAQEAGQLRSPWG 891
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
IAV V V+D+ NHRV+ FD G I +G G +GQ FP G+ VD +G + D
Sbjct: 892 IAVDGQGDVYVTDTGNHRVEKFDREGNFIAQWGGFGGGDGQFNFPYGIVVDSRGSVFAVD 951
Query: 264 SGNNRIQIFTP 274
SGN R+Q F P
Sbjct: 952 SGNTRVQQFMP 962
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 95/208 (45%), Gaps = 36/208 (17%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGP-DNSIVVADSSNHRVQVCFPHFDLKTNCVFL------ 95
K GSRG+ G F P GIA+ I V DS+N RVQ FD+ +
Sbjct: 764 MKFGSRGNGEGQFNAPWGIAIDRVRGYIYVVDSANFRVQ----KFDMSGEFIMSWGSFGN 819
Query: 96 ---AFTWPRGIAVG-PDNSIVVADSSNHRVQVFQSDGT----FVGKFG----------SM 137
F +PRGIAV D ++ V D NHRVQ F + + K+G +
Sbjct: 820 GDGQFYFPRGIAVDQADGTVYVVDMGNHRVQKFDTSTNVLPQLLTKWGGSSEAGHASSPL 879
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
+AGQL P IAV V V+D+ NHRV+ FD +G F+ ++G G GQ
Sbjct: 880 AQEAGQLRSPWGIAVDGQGDVYVTDTGNHRVEKFD-------REGNFIAQWGGFGGGDGQ 932
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
P+ I V + V DS N RVQ F
Sbjct: 933 FNFPYGIVVDSRGSVFAVDSGNTRVQQF 960
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ G G DGEF G+AV +GNI V D +NH IQ F
Sbjct: 157 KVIGQEGVEDGEFSSPTGIAVDKDGNIYVADTDNHSIQKF 196
>gi|124009517|ref|ZP_01694192.1| cell surface protein [Microscilla marina ATCC 23134]
gi|123984863|gb|EAY24831.1| cell surface protein [Microscilla marina ATCC 23134]
Length = 508
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 125/225 (55%), Gaps = 9/225 (4%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P+GI D S V++ N RVQ F DG +V +FG G G+LE P+++A +
Sbjct: 35 FNAPQGILFNADGSFWVSEGINDRVQKFDKDGNYVSQFGGSGTTNGKLEFPYWLAKDSQG 94
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ V+D +NHR+Q FD DG ++ +FG+ GN GQ P I + ++ + V D
Sbjct: 95 NIFVTDGSNHRIQKFD-------KDGNYLSQFGTNGNGDGQFNTPRAIVIDASDNIYVVD 147
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
NN+RVQ FD NG + FG G+ +G+ P G+ +D G + V D N+RIQ F DG
Sbjct: 148 FNNNRVQKFDKNGTYQSQFGGAGTTDGKFSGPDGMVMDASGNLYVVDRNNDRIQKFDKDG 207
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHR--IQVF 319
FL FG G+GD +F G+A+ +G I V D +N I+VF
Sbjct: 208 TFLSKFGSTGTGDAQFTKPAGIAIDKDGFIYVSDDDNSNDYIKVF 252
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 139/284 (48%), Gaps = 23/284 (8%)
Query: 47 SRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------AF 97
+ G+ G F P+GI D S V++ N RVQ FD N V
Sbjct: 27 TDGTGNGEFNAPQGILFNADGSFWVSEGINDRVQ----KFDKDGNYVSQFGGSGTTNGKL 82
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
+P +A +I V D SNHR+Q F DG ++ +FG+ GN GQ P I + ++
Sbjct: 83 EFPYWLAKDSQGNIFVTDGSNHRIQKFDKDGNYLSQFGTNGNGDGQFNTPRAIVIDASDN 142
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
+ V D NN+RVQ FD NG T+ +FG G G+ P + + + + V D
Sbjct: 143 IYVVDFNNNRVQKFDKNG-------TYQSQFGGAGTTDGKFSGPDGMVMDASGNLYVVDR 195
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG--YISVGDSGNNRIQIFTPD 275
NN R+Q FD +G ++ FGS G+ + Q P G+A+D G Y+S D+ N+ I++F D
Sbjct: 196 NNDRIQKFDKDGTFLSKFGSTGTGDAQFTKPAGIAIDKDGFIYVSDDDNSNDYIKVFKSD 255
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G F++ F +G G K + +NG + + D RI++
Sbjct: 256 GTFVKKFNSNNAG-GTTKSERQLHFDANGQLYISDPLEDRIRIM 298
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 110/242 (45%), Gaps = 23/242 (9%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------- 95
+ G G+ G +P +A +I V D SNHR+Q FD N +
Sbjct: 71 QFGGSGTTNGKLEFPYWLAKDSQGNIFVTDGSNHRIQ----KFDKDGNYLSQFGTNGNGD 126
Query: 96 -AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F PR I + ++I V D +N+RVQ F +GT+ +FG G G+ P + +
Sbjct: 127 GQFNTPRAIVIDASDNIYVVDFNNNRVQKFDKNGTYQSQFGGAGTTDGKFSGPDGMVMDA 186
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ + V D NN R+Q FD DGTF+ KFGS G Q P IA+ + V
Sbjct: 187 SGNLYVVDRNNDRIQKFD-------KDGTFLSKFGSTGTGDAQFTKPAGIAIDKDGFIYV 239
Query: 215 SDSNNHR--VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
SD +N +++F +G + F S + G K R + D G + + D +RI+I
Sbjct: 240 SDDDNSNDYIKVFKSDGTFVKKFNSNNA-GGTTKSERQLHFDANGQLYISDPLEDRIRIM 298
Query: 273 TP 274
P
Sbjct: 299 AP 300
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA----- 96
Q + G G+ G F+ P G+ + ++ V D +N R+Q FD + FL+
Sbjct: 163 QSQFGGAGTTDGKFSGPDGMVMDASGNLYVVDRNNDRIQ----KFD--KDGTFLSKFGST 216
Query: 97 ------FTWPRGIAVGPDNSIVVAD--SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
FT P GIA+ D I V+D +SN ++VF+SDGTFV KF S N G +
Sbjct: 217 GTGDAQFTKPAGIAIDKDGFIYVSDDDNSNDYIKVFKSDGTFVKKFNS-NNAGGTTKSER 275
Query: 149 YIAVSNTNRVIVSDSNNHRVQIF 171
+ ++ +SD R++I
Sbjct: 276 QLHFDANGQLYISDPLEDRIRIM 298
>gi|7495877|pir||T19212 hypothetical protein C12C8.3 - Caenorhabditis elegans
Length = 1185
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/222 (38%), Positives = 128/222 (57%), Gaps = 9/222 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GI V ++VAD SN+RVQ+F DG F+ KFG+ GN+ GQ + P I ++ N ++
Sbjct: 886 PWGICVDQRGRVIVADRSNNRVQIFDKDGNFISKFGTSGNRPGQFDRPAGITTNSLNNIV 945
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHRVQ+FD N G F+ KFG G G +P +A ++ N + VSD+ N
Sbjct: 946 VADKDNHRVQVFDEN-------GMFLLKFGDRGRAVGYFNYPWGVATNSHNAIAVSDTRN 998
Query: 220 HRVQIFDVNGRVITSFGSEGSE-EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP-DGQ 277
HRVQIF G+ + G + + L PRG+ G + + D N+R+ + +P +
Sbjct: 999 HRVQIFTPQGQFVRKCGFDSAYFFKNLDSPRGLCYLPDGQLLITDFNNHRLAVLSPRNMS 1058
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++ +G G GDG F +GV + G+ILVCD N+R+QVF
Sbjct: 1059 EMKVYGSEGDGDGMFVRPQGVVIDPEGHILVCDSRNNRVQVF 1100
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 26/258 (10%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------ 96
G GS G P GI V ++VAD SN+RVQ+ FD N F++
Sbjct: 871 LTFGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQI----FDKDGN--FISKFGTSG 924
Query: 97 -----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
F P GI N+IVVAD NHRVQVF +G F+ KFG G G +P +A
Sbjct: 925 NRPGQFDRPAGITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGYFNYPWGVA 984
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
++ N + VSD+ NHRVQIF G+ + G F L+ P + +
Sbjct: 985 TNSHNAIAVSDTRNHRVQIFTPQGQFVRKCGFDSAYFFK------NLDSPRGLCYLPDGQ 1038
Query: 212 VIVSDSNNHRVQIFDV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
++++D NNHR+ + N + +GSEG +G P+GV +D +G+I V DS NNR+Q
Sbjct: 1039 LLITDFNNHRLAVLSPRNMSEMKVYGSEGDGDGMFVRPQGVVIDPEGHILVCDSRNNRVQ 1098
Query: 271 IFTPDGQFLRAFGCWGSG 288
+F D +R G +G G
Sbjct: 1099 VFASDD--MRFIGSFGLG 1114
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 74/132 (56%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG G+ G+L P I V RVIV+D +N+RVQIFD +G I+ FG+ G+ GQ
Sbjct: 873 FGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIFDKDGNFISKFGTSGNRPGQFDR 932
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+ + I V D N+R+Q+F +G FL FG G G F GVA S+ I
Sbjct: 933 PAGITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGYFNYPWGVATNSHNAIA 992
Query: 308 VCDRENHRIQVF 319
V D NHR+Q+F
Sbjct: 993 VSDTRNHRVQIF 1004
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
I +FG EGS +G+L P G+ VD +G + V D NNR+QIF DG F+ FG G+ G+
Sbjct: 870 ILTFGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIFDKDGNFISKFGTSGNRPGQ 929
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G+ S NI+V D++NHR+QVF
Sbjct: 930 FDRPAGITTNSLNNIVVADKDNHRVQVF 957
>gi|71980716|ref|NP_001020999.1| Protein LIN-41, isoform b [Caenorhabditis elegans]
gi|6531661|gb|AAF15529.1|AF195610_1 LIN-41A [Caenorhabditis elegans]
gi|14530342|emb|CAC42255.1| Protein LIN-41, isoform b [Caenorhabditis elegans]
Length = 1143
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/222 (38%), Positives = 128/222 (57%), Gaps = 9/222 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GI V ++VAD SN+RVQ+F DG F+ KFG+ GN+ GQ + P I ++ N ++
Sbjct: 844 PWGICVDQRGRVIVADRSNNRVQIFDKDGNFISKFGTSGNRPGQFDRPAGITTNSLNNIV 903
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHRVQ+FD N G F+ KFG G G +P +A ++ N + VSD+ N
Sbjct: 904 VADKDNHRVQVFDEN-------GMFLLKFGDRGRAVGYFNYPWGVATNSHNAIAVSDTRN 956
Query: 220 HRVQIFDVNGRVITSFGSEGSE-EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP-DGQ 277
HRVQIF G+ + G + + L PRG+ G + + D N+R+ + +P +
Sbjct: 957 HRVQIFTPQGQFVRKCGFDSAYFFKNLDSPRGLCYLPDGQLLITDFNNHRLAVLSPRNMS 1016
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++ +G G GDG F +GV + G+ILVCD N+R+QVF
Sbjct: 1017 EMKVYGSEGDGDGMFVRPQGVVIDPEGHILVCDSRNNRVQVF 1058
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 26/258 (10%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------ 96
G GS G P GI V ++VAD SN+RVQ+ FD N F++
Sbjct: 829 LTFGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQI----FDKDGN--FISKFGTSG 882
Query: 97 -----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
F P GI N+IVVAD NHRVQVF +G F+ KFG G G +P +A
Sbjct: 883 NRPGQFDRPAGITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGYFNYPWGVA 942
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
++ N + VSD+ NHRVQIF G+ + G F L+ P + +
Sbjct: 943 TNSHNAIAVSDTRNHRVQIFTPQGQFVRKCGFDSAYFFK------NLDSPRGLCYLPDGQ 996
Query: 212 VIVSDSNNHRVQIFDV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
++++D NNHR+ + N + +GSEG +G P+GV +D +G+I V DS NNR+Q
Sbjct: 997 LLITDFNNHRLAVLSPRNMSEMKVYGSEGDGDGMFVRPQGVVIDPEGHILVCDSRNNRVQ 1056
Query: 271 IFTPDGQFLRAFGCWGSG 288
+F D +R G +G G
Sbjct: 1057 VFASDD--MRFIGSFGLG 1072
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 74/132 (56%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG G+ G+L P I V RVIV+D +N+RVQIFD +G I+ FG+ G+ GQ
Sbjct: 831 FGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIFDKDGNFISKFGTSGNRPGQFDR 890
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+ + I V D N+R+Q+F +G FL FG G G F GVA S+ I
Sbjct: 891 PAGITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGYFNYPWGVATNSHNAIA 950
Query: 308 VCDRENHRIQVF 319
V D NHR+Q+F
Sbjct: 951 VSDTRNHRVQIF 962
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
I +FG EGS +G+L P G+ VD +G + V D NNR+QIF DG F+ FG G+ G+
Sbjct: 828 ILTFGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIFDKDGNFISKFGTSGNRPGQ 887
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G+ S NI+V D++NHR+QVF
Sbjct: 888 FDRPAGITTNSLNNIVVADKDNHRVQVF 915
>gi|71980713|ref|NP_001020998.1| Protein LIN-41, isoform a [Caenorhabditis elegans]
gi|75025863|sp|Q9U489.1|LIN41_CAEEL RecName: Full=Protein lin-41; AltName: Full=Abnormal cell lineage
protein 41
gi|6531663|gb|AAF15530.1|AF195611_1 LIN-41B [Caenorhabditis elegans]
gi|14530341|emb|CAC42254.1| Protein LIN-41, isoform a [Caenorhabditis elegans]
Length = 1147
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/222 (38%), Positives = 128/222 (57%), Gaps = 9/222 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GI V ++VAD SN+RVQ+F DG F+ KFG+ GN+ GQ + P I ++ N ++
Sbjct: 848 PWGICVDQRGRVIVADRSNNRVQIFDKDGNFISKFGTSGNRPGQFDRPAGITTNSLNNIV 907
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHRVQ+FD N G F+ KFG G G +P +A ++ N + VSD+ N
Sbjct: 908 VADKDNHRVQVFDEN-------GMFLLKFGDRGRAVGYFNYPWGVATNSHNAIAVSDTRN 960
Query: 220 HRVQIFDVNGRVITSFGSEGSE-EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP-DGQ 277
HRVQIF G+ + G + + L PRG+ G + + D N+R+ + +P +
Sbjct: 961 HRVQIFTPQGQFVRKCGFDSAYFFKNLDSPRGLCYLPDGQLLITDFNNHRLAVLSPRNMS 1020
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++ +G G GDG F +GV + G+ILVCD N+R+QVF
Sbjct: 1021 EMKVYGSEGDGDGMFVRPQGVVIDPEGHILVCDSRNNRVQVF 1062
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 26/258 (10%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------ 96
G GS G P GI V ++VAD SN+RVQ+ FD N F++
Sbjct: 833 LTFGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQI----FDKDGN--FISKFGTSG 886
Query: 97 -----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
F P GI N+IVVAD NHRVQVF +G F+ KFG G G +P +A
Sbjct: 887 NRPGQFDRPAGITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGYFNYPWGVA 946
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
++ N + VSD+ NHRVQIF G+ + G F L+ P + +
Sbjct: 947 TNSHNAIAVSDTRNHRVQIFTPQGQFVRKCGFDSAYFFK------NLDSPRGLCYLPDGQ 1000
Query: 212 VIVSDSNNHRVQIFDV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
++++D NNHR+ + N + +GSEG +G P+GV +D +G+I V DS NNR+Q
Sbjct: 1001 LLITDFNNHRLAVLSPRNMSEMKVYGSEGDGDGMFVRPQGVVIDPEGHILVCDSRNNRVQ 1060
Query: 271 IFTPDGQFLRAFGCWGSG 288
+F D +R G +G G
Sbjct: 1061 VFASDD--MRFIGSFGLG 1076
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 74/132 (56%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG G+ G+L P I V RVIV+D +N+RVQIFD +G I+ FG+ G+ GQ
Sbjct: 835 FGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIFDKDGNFISKFGTSGNRPGQFDR 894
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+ + I V D N+R+Q+F +G FL FG G G F GVA S+ I
Sbjct: 895 PAGITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGYFNYPWGVATNSHNAIA 954
Query: 308 VCDRENHRIQVF 319
V D NHR+Q+F
Sbjct: 955 VSDTRNHRVQIF 966
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
I +FG EGS +G+L P G+ VD +G + V D NNR+QIF DG F+ FG G+ G+
Sbjct: 832 ILTFGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIFDKDGNFISKFGTSGNRPGQ 891
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G+ S NI+V D++NHR+QVF
Sbjct: 892 FDRPAGITTNSLNNIVVADKDNHRVQVF 919
>gi|3043558|dbj|BAA25443.1| KIAA0517 protein [Homo sapiens]
Length = 792
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 155/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQ+
Sbjct: 502 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF 561
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 562 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 620
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 621 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 669
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 670 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 729
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 730 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 786
Query: 318 VF 319
V+
Sbjct: 787 VY 788
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 699 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 752
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 753 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 789
>gi|395735425|ref|XP_002815267.2| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
2, partial [Pongo abelii]
Length = 794
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 155/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQ+
Sbjct: 504 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF 563
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 564 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 622
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 623 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 671
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 672 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 731
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 732 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 788
Query: 318 VF 319
V+
Sbjct: 789 VY 790
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 701 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 754
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 755 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 791
>gi|395834570|ref|XP_003790272.1| PREDICTED: tripartite motif-containing protein 2 [Otolemur
garnettii]
Length = 744
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 155/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 704
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 705 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|308485736|ref|XP_003105066.1| CRE-LIN-41 protein [Caenorhabditis remanei]
gi|308257011|gb|EFP00964.1| CRE-LIN-41 protein [Caenorhabditis remanei]
Length = 1195
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 127/222 (57%), Gaps = 9/222 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GI V ++VAD SN+RVQ+F DG F+ KFG+ GN+ GQ + P I + +N ++
Sbjct: 895 PWGICVDQRGRVIVADRSNNRVQIFDKDGNFLSKFGTTGNRPGQFDRPAGITTNTSNHIV 954
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+Q+FD N G F+ KFG G G +P +A ++ N + VSD+ N
Sbjct: 955 VADKDNHRIQVFDEN-------GMFLLKFGDRGRAVGYFNYPWGVATNSHNAIAVSDTRN 1007
Query: 220 HRVQIFDVNGRVITSFGSEGSE-EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP-DGQ 277
HRVQIF G+ + G + + L PRG+ G + + D N+R+ + +P +
Sbjct: 1008 HRVQIFTPQGQFVRKCGFDSAYFFKNLDSPRGLCYLPDGQLLITDFNNHRLAVLSPRNMS 1067
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++ +G G DG F +GV + G+ILVCD N+RIQVF
Sbjct: 1068 EMKVYGSEGDADGMFVRPQGVVIDPEGHILVCDSRNNRIQVF 1109
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 128/258 (49%), Gaps = 26/258 (10%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------ 96
G GS G P GI V ++VAD SN+RVQ+ FD N FL+
Sbjct: 880 LTFGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQI----FDKDGN--FLSKFGTTG 933
Query: 97 -----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
F P GI N IVVAD NHR+QVF +G F+ KFG G G +P +A
Sbjct: 934 NRPGQFDRPAGITTNTSNHIVVADKDNHRIQVFDENGMFLLKFGDRGRAVGYFNYPWGVA 993
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
++ N + VSD+ NHRVQIF G+ + G F L+ P + +
Sbjct: 994 TNSHNAIAVSDTRNHRVQIFTPQGQFVRKCGFDSAYFFK------NLDSPRGLCYLPDGQ 1047
Query: 212 VIVSDSNNHRVQIFDV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
++++D NNHR+ + N + +GSEG +G P+GV +D +G+I V DS NNRIQ
Sbjct: 1048 LLITDFNNHRLAVLSPRNMSEMKVYGSEGDADGMFVRPQGVVIDPEGHILVCDSRNNRIQ 1107
Query: 271 IFTPDGQFLRAFGCWGSG 288
+F D +R G +G G
Sbjct: 1108 VFASDD--MRFIGSFGLG 1123
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 75/132 (56%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG G+ G+L P I V RVIV+D +N+RVQIFD +G ++ FG+ G+ GQ
Sbjct: 882 FGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIFDKDGNFLSKFGTTGNRPGQFDR 941
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+ + +I V D N+RIQ+F +G FL FG G G F GVA S+ I
Sbjct: 942 PAGITTNTSNHIVVADKDNHRIQVFDENGMFLLKFGDRGRAVGYFNYPWGVATNSHNAIA 1001
Query: 308 VCDRENHRIQVF 319
V D NHR+Q+F
Sbjct: 1002 VSDTRNHRVQIF 1013
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
I +FG EGS +G+L P G+ VD +G + V D NNR+QIF DG FL FG G+ G+
Sbjct: 879 ILTFGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIFDKDGNFLSKFGTTGNRPGQ 938
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G+ ++ +I+V D++NHRIQVF
Sbjct: 939 FDRPAGITTNTSNHIVVADKDNHRIQVF 966
>gi|139948811|ref|NP_001077204.1| tripartite motif-containing protein 2 [Bos taurus]
gi|353558884|sp|A4IF63.1|TRIM2_BOVIN RecName: Full=Tripartite motif-containing protein 2; AltName:
Full=E3 ubiquitin-protein ligase TRIM2
gi|134025874|gb|AAI34424.1| TRIM2 protein [Bos taurus]
gi|296478797|tpg|DAA20912.1| TPA: tripartite motif-containing 2 [Bos taurus]
Length = 744
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 155/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 704
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 705 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|148227830|ref|NP_001086096.1| MGC82029 protein [Xenopus laevis]
gi|49257592|gb|AAH74184.1| MGC82029 protein [Xenopus laevis]
Length = 744
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 156/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F +DG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSADGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDKQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ +G I FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQDGEFILKFGSNGEGNGQFNAPTGVAVDSNG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+++ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLSLTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
K GS G G F P G+AV + +I+VAD N R+QV FD + FL++
Sbjct: 657 LKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+++ D +VVADS NH +V++
Sbjct: 711 DPLYGPQGLSLTSDGHVVVADSGNHCFKVYR 741
>gi|348582200|ref|XP_003476864.1| PREDICTED: tripartite motif-containing protein 2-like [Cavia
porcellus]
Length = 887
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 597 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 656
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 657 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 715
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V KFGS GN Q
Sbjct: 716 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTKFGSRGNGDRQ 764
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 765 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 824
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 825 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 881
Query: 318 VF 319
V+
Sbjct: 882 VY 883
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 794 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 847
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 848 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 884
>gi|440899161|gb|ELR50510.1| Tripartite motif-containing protein 2, partial [Bos grunniens
mutus]
Length = 762
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 155/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQ+
Sbjct: 472 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF 531
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 532 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 590
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 591 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 639
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 640 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 699
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 700 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 756
Query: 318 VF 319
V+
Sbjct: 757 VY 758
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 669 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 722
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 723 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 759
>gi|194248081|ref|NP_001123539.1| tripartite motif-containing protein 2 isoform 2 [Homo sapiens]
gi|426345754|ref|XP_004040565.1| PREDICTED: tripartite motif-containing protein 2 [Gorilla gorilla
gorilla]
gi|21363034|sp|Q9C040.1|TRIM2_HUMAN RecName: Full=Tripartite motif-containing protein 2; AltName:
Full=E3 ubiquitin-protein ligase TRIM2; AltName:
Full=RING finger protein 86
gi|12407367|gb|AAG53472.1|AF220018_1 tripartite motif protein TRIM2 [Homo sapiens]
gi|15029681|gb|AAH11052.1| TRIM2 protein [Homo sapiens]
gi|325464659|gb|ADZ16100.1| tripartite motif-containing 2 [synthetic construct]
Length = 744
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 155/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 704
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 705 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|432889748|ref|XP_004075342.1| PREDICTED: tripartite motif-containing protein 3-like [Oryzias
latipes]
Length = 751
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 154/296 (52%), Gaps = 20/296 (6%)
Query: 29 TTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL 88
TT + + + L +++G+RG + G FT +GI+ + IVVADS+N +QV
Sbjct: 467 TTKKKENPIEDELIYRVGTRGRDKGEFTNLQGISASSNGRIVVADSNNQCIQVFSNDGQF 526
Query: 89 KTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
K P G+ V + I+VAD N + +F SDG F K G AG+
Sbjct: 527 KMRFGVRGRSPGQLQRPTGVTVDVNGDIIVADYDNRWISIFSSDGKFKNKIG-----AGR 581
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
L P +AV +I +D N +F +FQS+G V KFG+ G PH+
Sbjct: 582 LMGPKGVAVDKNGHIITAD--NKACCVF-----IFQSNGKLVTKFGARGTSDRHFTGPHF 634
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
+AV+N N ++V+D +NH V++++ +G + FGS G GQ P GVAVD G I V D
Sbjct: 635 VAVNNKNEIVVTDFHNHSVKVYNADGEFLFKFGSHGEGNGQFNAPTGVAVDANGNIIVAD 694
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GN+RIQ+F G FL S D + G +G+A+ S+G++ V D NH +V+
Sbjct: 695 WGNSRIQVFDSSGSFLSYINT--SADPLY-GPQGLALTSDGHVAVADSGNHCFKVY 747
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 664 FKFGSHGEGNGQFNAPTGVAVDANGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 717
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D + VADS NH +V++
Sbjct: 718 DPLYGPQGLALTSDGHVAVADSGNHCFKVYR 748
>gi|345328741|ref|XP_001514346.2| PREDICTED: tripartite motif-containing protein 2 [Ornithorhynchus
anatinus]
Length = 871
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 155/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQ+
Sbjct: 581 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF 640
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 641 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 699
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 700 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 748
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 749 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 808
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 809 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 865
Query: 318 VF 319
V+
Sbjct: 866 VY 867
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 778 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 831
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 832 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 868
>gi|348518664|ref|XP_003446851.1| PREDICTED: tripartite motif-containing protein 3-like [Oreochromis
niloticus]
Length = 748
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 155/297 (52%), Gaps = 22/297 (7%)
Query: 29 TTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP---H 85
TT + + + L +++GSRG E G FT +GI+ + +VVADS+N +QV F
Sbjct: 464 TTKKKENPIEDELIYRVGSRGREKGEFTNLQGISASSNGRVVVADSNNQCIQV-FSNDGQ 522
Query: 86 FDLKTNCVFLA---FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
F ++ + P G+ V + IVVAD N V +F DG F K G AG
Sbjct: 523 FKMRFGVRGRSPGQLQRPTGVTVDVNGDIVVADYDNRWVSIFSPDGKFKNKIG-----AG 577
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
+L P +AV +I D N +F +FQS+G V KFG G Q PH
Sbjct: 578 RLMGPKGVAVDKNGHIITVD--NKACCVF-----IFQSNGKLVTKFGGRGTSDRQFAGPH 630
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
++AV+N N +IV+D +NH V+++ +G + FGS G GQ P GVAVD G I V
Sbjct: 631 FVAVNNKNEIIVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDANGNIIVA 690
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D GN+RIQ+F G FL S D + G +G+A+ S+G++ V D NH +V+
Sbjct: 691 DWGNSRIQVFDSTGSFLSYIN--TSADPLY-GPQGLALTSDGHVAVADSGNHCFKVY 744
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD + FL++
Sbjct: 661 FKFGSHGEGNGQFNAPTGVAVDANGNIIVADWGNSRIQV----FD--STGSFLSYINTSA 714
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D + VADS NH +V++
Sbjct: 715 DPLYGPQGLALTSDGHVAVADSGNHCFKVYR 745
>gi|350587708|ref|XP_003357040.2| PREDICTED: tripartite motif-containing protein 2 [Sus scrofa]
Length = 744
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 704
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 705 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|403272315|ref|XP_003928016.1| PREDICTED: tripartite motif-containing protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 744
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 155/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 704
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 705 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|341880668|gb|EGT36603.1| CBN-LIN-41 protein [Caenorhabditis brenneri]
Length = 1207
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 127/222 (57%), Gaps = 9/222 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GI V ++VAD SN+RVQ+F DG F+ KFG+ GN+ GQ + P I + N ++
Sbjct: 909 PWGICVDQRGRVIVADRSNNRVQIFDKDGNFLAKFGTSGNRPGQFDRPAGITTNTLNNIV 968
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHRVQ+FD NG+ F+ KFG G G +P +A ++ N + VSD+ N
Sbjct: 969 VADKDNHRVQVFDENGQ-------FLLKFGDRGRAVGYFNYPWGVATNSHNAIAVSDTRN 1021
Query: 220 HRVQIFDVNGRVITSFGSEGSE-EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP-DGQ 277
HRVQIF G+ + G + + L PRG+ G + + D N+R+ I +P +
Sbjct: 1022 HRVQIFTPQGQFVRKCGFDSAYFFKNLDSPRGLCYLPDGQLLITDFNNHRLAILSPRNMS 1081
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++ +G G DG F +GV + G+ILVCD N+RIQVF
Sbjct: 1082 EMKVYGSEGDADGMFVRPQGVVIDPEGHILVCDSRNNRIQVF 1123
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 130/254 (51%), Gaps = 25/254 (9%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------ 96
G GS G P GI V ++VAD SN+RVQ+ FD N FLA
Sbjct: 894 LTFGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQI----FDKDGN--FLAKFGTSG 947
Query: 97 -----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
F P GI N+IVVAD NHRVQVF +G F+ KFG G G +P +A
Sbjct: 948 NRPGQFDRPAGITTNTLNNIVVADKDNHRVQVFDENGQFLLKFGDRGRAVGYFNYPWGVA 1007
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
++ N + VSD+ NHRVQIF G+ + G F L+ P + +
Sbjct: 1008 TNSHNAIAVSDTRNHRVQIFTPQGQFVRKCGFDSAYFFK------NLDSPRGLCYLPDGQ 1061
Query: 212 VIVSDSNNHRVQIFDV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
++++D NNHR+ I N + +GSEG +G P+GV +D +G+I V DS NNRIQ
Sbjct: 1062 LLITDFNNHRLAILSPRNMSEMKVYGSEGDADGMFVRPQGVVIDPEGHILVCDSRNNRIQ 1121
Query: 271 IF-TPDGQFLRAFG 283
+F + D +F+ +FG
Sbjct: 1122 VFASEDMRFIASFG 1135
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 74/132 (56%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG G+ G+L P I V RVIV+D +N+RVQIFD +G + FG+ G+ GQ
Sbjct: 896 FGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIFDKDGNFLAKFGTSGNRPGQFDR 955
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+ + I V D N+R+Q+F +GQFL FG G G F GVA S+ I
Sbjct: 956 PAGITTNTLNNIVVADKDNHRVQVFDENGQFLLKFGDRGRAVGYFNYPWGVATNSHNAIA 1015
Query: 308 VCDRENHRIQVF 319
V D NHR+Q+F
Sbjct: 1016 VSDTRNHRVQIF 1027
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 99/237 (41%), Gaps = 24/237 (10%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC------VFLA 96
K G RG G F +P G+A N+I V+D+ NHRVQ+ P C F
Sbjct: 988 LKFGDRGRAVGYFNYPWGVATNSHNAIAVSDTRNHRVQIFTPQGQFVRKCGFDSAYFFKN 1047
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGK-FGSMGNKAGQLEHPHYIAVSNT 155
PRG+ PD +++ D +NHR+ + K +GS G+ G P + +
Sbjct: 1048 LDSPRGLCYLPDGQLLITDFNNHRLAILSPRNMSEMKVYGSEGDADGMFVRPQGVVIDPE 1107
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
++V DS N+R+Q+F D F+ FG +G A + P + + S
Sbjct: 1108 GHILVCDSRNNRIQVF------ASEDMRFIASFG-LGPVAAGFQMPQELPAPYS-----S 1155
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+ F +T S L P +AV G I V D GNN I++F
Sbjct: 1156 LAGPFGAPSFSSTPTPLTP-----SPRQLLDRPTDLAVGPDGRIYVVDFGNNCIRVF 1207
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 57/93 (61%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
N I +FG EGS +G+L P G+ VD +G + V D NNR+QIF DG FL FG G
Sbjct: 888 ANKGPILTFGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIFDKDGNFLAKFGTSG 947
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ G+F G+ + NI+V D++NHR+QVF
Sbjct: 948 NRPGQFDRPAGITTNTLNNIVVADKDNHRVQVF 980
>gi|403272313|ref|XP_003928015.1| PREDICTED: tripartite motif-containing protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 771
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 155/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQ+
Sbjct: 481 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF 540
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 541 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 599
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 600 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 648
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 649 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 708
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 709 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 765
Query: 318 VF 319
V+
Sbjct: 766 VY 767
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 678 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 731
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 732 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 768
>gi|194248079|ref|NP_056086.2| tripartite motif-containing protein 2 isoform 1 [Homo sapiens]
gi|119625365|gb|EAX04960.1| tripartite motif-containing 2, isoform CRA_a [Homo sapiens]
gi|119625367|gb|EAX04962.1| tripartite motif-containing 2, isoform CRA_a [Homo sapiens]
gi|168267392|dbj|BAG09752.1| tripartite motif-containing protein 2 [synthetic construct]
Length = 771
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 155/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQ+
Sbjct: 481 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF 540
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 541 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 599
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 600 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 648
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 649 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 708
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 709 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 765
Query: 318 VF 319
V+
Sbjct: 766 VY 767
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 678 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 731
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 732 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 768
>gi|47227079|emb|CAG00441.1| unnamed protein product [Tetraodon nigroviridis]
Length = 774
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 153/296 (51%), Gaps = 20/296 (6%)
Query: 29 TTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL 88
TT + + + L +++GSRG E G FT +GI+ + +VVADS+N +Q+
Sbjct: 490 TTKKKENPIEDELIYRVGSRGREKGEFTNLQGISASSNGRVVVADSNNQCIQIFSNDGQF 549
Query: 89 KTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
K P G+ V + IVVAD N V +F ++G F K G AG+
Sbjct: 550 KMRFGIRGRSPGQLQRPTGVTVDMNGDIVVADYDNRWVSIFSAEGKFKNKIG-----AGR 604
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
L P +AV +I D N +F +FQS+G V KFG G Q PH+
Sbjct: 605 LMGPKGVAVDKNGHIITVD--NKACCVF-----IFQSNGKLVTKFGGRGTADRQFAGPHF 657
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
+AV+N N +IV+D +NH V++++ +G + FGS G GQ P GVAVD G I V D
Sbjct: 658 VAVNNKNEIIVTDFHNHSVKVYNADGEFLFKFGSHGEGNGQFNAPTGVAVDANGNIIVAD 717
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GN+RIQ+F G FL S D + G +G+A+ S+G++ V D NH +V+
Sbjct: 718 WGNSRIQVFDSTGSFLSYINT--SADPLY-GPQGLALTSDGHVAVADSGNHCFKVY 770
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD + FL++
Sbjct: 687 FKFGSHGEGNGQFNAPTGVAVDANGNIIVADWGNSRIQV----FD--STGSFLSYINTSA 740
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D + VADS NH +V++
Sbjct: 741 DPLYGPQGLALTSDGHVAVADSGNHCFKVYR 771
>gi|410956709|ref|XP_003984981.1| PREDICTED: tripartite motif-containing protein 2 [Felis catus]
Length = 744
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 704
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 705 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|353558883|sp|D2GXS7.1|TRIM2_AILME RecName: Full=Tripartite motif-containing protein 2; AltName:
Full=E3 ubiquitin-protein ligase TRIM2
gi|281350965|gb|EFB26549.1| hypothetical protein PANDA_001730 [Ailuropoda melanoleuca]
Length = 744
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 704
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 705 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|119625368|gb|EAX04963.1| tripartite motif-containing 2, isoform CRA_c [Homo sapiens]
Length = 770
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 155/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQ+
Sbjct: 480 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF 539
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 540 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 598
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 599 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 647
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 648 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 707
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 708 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 764
Query: 318 VF 319
V+
Sbjct: 765 VY 766
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 677 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 730
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 731 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 767
>gi|290971637|ref|XP_002668593.1| predicted protein [Naegleria gruberi]
gi|284082064|gb|EFC35849.1| predicted protein [Naegleria gruberi]
Length = 354
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 165/321 (51%), Gaps = 40/321 (12%)
Query: 15 LLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADS 74
+L+ +++ + QV + G +G+E G F+ P IA+ P ++I++ D+
Sbjct: 57 MLEEVIIDNVKQVDESEEC-----------FGGKGTEDGQFSSPTDIAIDPSDNIIICDN 105
Query: 75 SNHRVQVCFPHFDLKTNCVFLAFTWPR--GIAVGPDNSIVVADSSNHRVQVFQSDGTFVG 132
N+RVQ+ FD K F+ P+ G+ +++ S +H V F GT VG
Sbjct: 106 ENNRVQI----FD-KQGKFLRKFSVPKPYGVTFDAKEGVILVTSDDHCVYAFDKSGTEVG 160
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTN-----RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK 187
KFGS G + G +P I VS T ++IV D +NHR+Q+FD G+F+
Sbjct: 161 KFGSKGAEYGHFSYPTGIIVSETKSQIPGKIIVCDHHNHRIQMFD-------KYGSFLKS 213
Query: 188 FGSMGN----KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
FG+ G + G P+ + + ++++D N RVQ+F ++G + F + E
Sbjct: 214 FGTNGTNPEMEGGYFYGPNSLDIDIDGNLVITDRYNCRVQVFTLDGTFVRKFSVKKQENS 273
Query: 244 QLKFPRGVAVDDQG----YISVGDSGNNRIQIFT-PDGQFLRAFGCWGSGDGEFKGLEGV 298
+ P G+ + Y ++ D NNRIQI+ +G ++ FGC+GS DG+F G GV
Sbjct: 274 ECD-PTGICCLKKNIGLNYAAICDYANNRIQIWNLREGAIIKQFGCYGSEDGQFDGPNGV 332
Query: 299 AVMSNGNILVCDRENHRIQVF 319
++ S G+++V D NHR+Q+F
Sbjct: 333 SITSEGHLVVVDYHNHRVQIF 353
>gi|417412608|gb|JAA52682.1| Putative e3 ubiquitin ligase, partial [Desmodus rotundus]
Length = 761
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 471 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 530
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 531 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 589
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 590 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 638
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 639 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSTG 698
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 699 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 755
Query: 318 VF 319
V+
Sbjct: 756 VY 757
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV +I+VAD N R+QV FD + FL+
Sbjct: 668 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSTGNIIVADWGNSRIQV----FDGSGS--FLS 721
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 722 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 758
>gi|332217502|ref|XP_003257899.1| PREDICTED: tripartite motif-containing protein 2 isoform 2
[Nomascus leucogenys]
gi|402870661|ref|XP_003899325.1| PREDICTED: tripartite motif-containing protein 2 isoform 2 [Papio
anubis]
Length = 744
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 704
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 705 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|426246927|ref|XP_004017238.1| PREDICTED: tripartite motif-containing protein 2 [Ovis aries]
Length = 739
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 449 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 508
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 509 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 567
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 568 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 616
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 617 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 676
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 677 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 733
Query: 318 VF 319
V+
Sbjct: 734 VY 735
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 646 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 699
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 700 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 736
>gi|291401099|ref|XP_002716938.1| PREDICTED: tripartite motif-containing 2-like [Oryctolagus
cuniculus]
Length = 789
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 499 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 558
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 559 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 617
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 618 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 666
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 667 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 726
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 727 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 783
Query: 318 VF 319
V+
Sbjct: 784 VY 785
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 696 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 749
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 750 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 786
>gi|363729521|ref|XP_422922.3| PREDICTED: tripartite motif-containing protein 3 [Gallus gallus]
Length = 743
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 150/285 (52%), Gaps = 22/285 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP---HFDLKTNCVFLA- 96
L F++GSRG E G FT +GI+ IVVADS+N VQV F F L+ +
Sbjct: 471 LIFRVGSRGREKGEFTNLQGISTSSTGRIVVADSNNQCVQV-FSNEGQFRLRFGVRGRSP 529
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
P G+ V + I++AD N V +F +G F K G AG+L P +AV
Sbjct: 530 GQLQRPTGVTVDMNGDIIIADYDNRWVSIFSPEGKFKTKIG-----AGRLLGPKGVAVDR 584
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV D N +F +FQS+G V KFGS G Q PH++AV+N N ++V
Sbjct: 585 NGHIIVVD--NKACCVF-----IFQSNGKLVTKFGSRGTAERQFAGPHFVAVNNKNEIVV 637
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+D +NH V++++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 638 TDFHNHSVKVYNADGEFLFKFGSHGEGNGQFNAPTGVAVDANGNIIVADWGNSRIQVFDS 697
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL + G +G+A+ S+G+++V D NH + +
Sbjct: 698 AGSFLSYI---NTAADPLYGPQGLALTSDGHVVVADSGNHCFKAY 739
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 121/233 (51%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ + + G RG PG P G+ V + I++AD N V + P KT
Sbjct: 517 QFRLRFGVRGRSPGQLQRPTGVTVDMNGDIIIADYDNRWVSIFSPEGKFKTKIGAGRLLG 576
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ V +FQS+G V KFGS G Q PH++AV+N N ++
Sbjct: 577 PKGVAVDRNGHIIVVDNKACCVFIFQSNGKLVTKFGSRGTAERQFAGPHFVAVNNKNEIV 636
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV +IV+D N
Sbjct: 637 VTDFHNHSV-------KVYNADGEFLFKFGSHGEGNGQFNAPTGVAVDANGNIIVADWGN 689
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD G ++ + L P+G+A+ G++ V DSGN+ + +
Sbjct: 690 SRIQVFDSAGSFLSYINTAADP---LYGPQGLALTSDGHVVVADSGNHCFKAY 739
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ +I GS G E+G+ +G++ G I V DS N +Q+F+ +GQF FG G
Sbjct: 467 IEDELIFRVGSRGREKGEFTNLQGISTSSTGRIVVADSNNQCVQVFSNEGQFRLRFGVRG 526
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GV V NG+I++ D +N + +F
Sbjct: 527 RSPGQLQRPTGVTVDMNGDIIIADYDNRWVSIF 559
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWP 100
FK GS G G F P G+AV + +I+VAD N R+QV F N P
Sbjct: 656 FKFGSHGEGNGQFNAPTGVAVDANGNIIVADWGNSRIQVFDSAGSFLSYINTAADPLYGP 715
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
+G+A+ D +VVADS NH + ++
Sbjct: 716 QGLALTSDGHVVVADSGNHCFKAYR 740
>gi|301756096|ref|XP_002913903.1| PREDICTED: tripartite motif-containing protein 2-like [Ailuropoda
melanoleuca]
Length = 816
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 526 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 585
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 586 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 644
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 645 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 693
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 694 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 753
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 754 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 810
Query: 318 VF 319
V+
Sbjct: 811 VY 812
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 723 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 776
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 777 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 813
>gi|296195383|ref|XP_002745432.1| PREDICTED: tripartite motif-containing protein 2 isoform 2
[Callithrix jacchus]
gi|353558885|sp|F7H9X2.1|TRIM2_CALJA RecName: Full=Tripartite motif-containing protein 2; AltName:
Full=E3 ubiquitin-protein ligase TRIM2
Length = 744
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 704
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 705 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|355687663|gb|EHH26247.1| hypothetical protein EGK_16166 [Macaca mulatta]
Length = 771
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 481 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 540
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 541 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 599
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 600 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 648
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 649 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 708
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 709 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 765
Query: 318 VF 319
V+
Sbjct: 766 VY 767
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 678 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 731
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 732 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 768
>gi|344291681|ref|XP_003417562.1| PREDICTED: tripartite motif-containing protein 2 [Loxodonta
africana]
Length = 772
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 482 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTTGKILIADSNNQCVQIF 541
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 542 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 600
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 601 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 649
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 650 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 709
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 710 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 766
Query: 318 VF 319
V+
Sbjct: 767 VY 768
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 679 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 732
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 733 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 769
>gi|60459910|gb|AAX20126.1| tripartite motif protein L-TRIM [Lymnaea stagnalis]
Length = 816
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 152/289 (52%), Gaps = 31/289 (10%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF--- 97
L +IG +G G F+ P+G+ + ++VADS+N VQV P + + L F
Sbjct: 545 LIIRIGVKGRNKGEFSNPQGLCYH-EEKVLVADSNNQAVQVFVPSGECR-----LKFGTP 598
Query: 98 -------TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
P G+AV + + +VAD N + VF DG ++ + G AG+L+ P +
Sbjct: 599 GRAPGKIQRPTGVAVTQNGNYLVADYDNKWISVFSPDGKYMSRIG-----AGRLQGPKGV 653
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
AV R+IV D+ + + IF QS+G + KFG+ GN+ Q PHY A++ N
Sbjct: 654 AVDREGRIIVVDNKSSCILIF-------QSNGKLLHKFGTRGNRDDQFAGPHYAAINENN 706
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
+I+SD +NH V++FD +G FGS G GQ P GVAVDD+G + V D GN+RIQ
Sbjct: 707 DIIISDFHNHCVKVFDRDGAFKFCFGSNGEGNGQFNAPTGVAVDDKGNMLVADWGNSRIQ 766
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+F G FL + G +G+AV + G ++V D NH I+ +
Sbjct: 767 VFDSTGSFLSYV---NTASEPLYGPQGLAVTTQGILVVADSGNHCIKYY 812
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 14/93 (15%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT-- 98
+F GS G G F P G+AV +++VAD N R+QV FD + FL++
Sbjct: 727 FKFCFGSNGEGNGQFNAPTGVAVDDKGNMLVADWGNSRIQV----FD--STGSFLSYVNT 780
Query: 99 ------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+AV +VVADS NH ++ ++
Sbjct: 781 ASEPLYGPQGLAVTTQGILVVADSGNHCIKYYK 813
>gi|332217500|ref|XP_003257898.1| PREDICTED: tripartite motif-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|402870659|ref|XP_003899324.1| PREDICTED: tripartite motif-containing protein 2 isoform 1 [Papio
anubis]
Length = 771
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 481 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 540
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 541 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 599
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 600 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 648
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 649 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 708
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 709 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 765
Query: 318 VF 319
V+
Sbjct: 766 VY 767
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 678 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 731
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 732 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 768
>gi|148683461|gb|EDL15408.1| tripartite motif protein 2, isoform CRA_a [Mus musculus]
Length = 568
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 278 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 337
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F +DG F K GS
Sbjct: 338 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGS- 396
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 397 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 445
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 446 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 505
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 506 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 562
Query: 318 VF 319
V+
Sbjct: 563 VY 564
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 475 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--GSGSFLS 528
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 529 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 565
>gi|348525352|ref|XP_003450186.1| PREDICTED: tripartite motif-containing protein 3-like [Oreochromis
niloticus]
Length = 747
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 153/296 (51%), Gaps = 20/296 (6%)
Query: 29 TTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL 88
TT + + + L +++G+RG + G FT +GI+ + IVVADS+N +QV
Sbjct: 463 TTKKKENPIEDELIYRVGTRGRDKGEFTNLQGISASSNGRIVVADSNNQCIQVFSNDGQF 522
Query: 89 KTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
K P G+ V + I+VAD N + +F SDG F K G AG+
Sbjct: 523 KMRFGVRGRSPGQLQRPTGVTVDMNGDIIVADYDNRWISIFSSDGKFKNKIG-----AGR 577
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
L P +AV +I D N +F +FQS+G V KFG+ G PH+
Sbjct: 578 LMGPKGVAVDKNGHIITVD--NKACCVF-----IFQSNGKLVTKFGARGTSDRHFAGPHF 630
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
+AV+N N ++V+D +NH V++++ +G + FGS G GQ P GVAVD G I V D
Sbjct: 631 VAVNNKNEIVVTDFHNHSVKVYNADGEFLFKFGSHGEGNGQFNAPTGVAVDANGNIIVAD 690
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GN+RIQ+F G FL S D + G +G+A+ S+G++ V D NH +V+
Sbjct: 691 WGNSRIQVFDSSGSFLSYINT--SADPLY-GPQGLALTSDGHVAVADSGNHCFKVY 743
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 660 FKFGSHGEGNGQFNAPTGVAVDANGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 713
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D + VADS NH +V++
Sbjct: 714 DPLYGPQGLALTSDGHVAVADSGNHCFKVYR 744
>gi|380783255|gb|AFE63503.1| tripartite motif-containing protein 2 isoform 1 [Macaca mulatta]
gi|380783257|gb|AFE63504.1| tripartite motif-containing protein 2 isoform 1 [Macaca mulatta]
gi|380783259|gb|AFE63505.1| tripartite motif-containing protein 2 isoform 1 [Macaca mulatta]
gi|380783261|gb|AFE63506.1| tripartite motif-containing protein 2 isoform 1 [Macaca mulatta]
Length = 771
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 481 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 540
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 541 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 599
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 600 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 648
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 649 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 708
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 709 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 765
Query: 318 VF 319
V+
Sbjct: 766 VY 767
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 678 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 731
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 732 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 768
>gi|410910292|ref|XP_003968624.1| PREDICTED: tripartite motif-containing protein 3-like [Takifugu
rubripes]
Length = 747
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 154/296 (52%), Gaps = 20/296 (6%)
Query: 29 TTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL 88
TT + + + L +++G+RG + G FT +GI+ + IVVADS+N +QV
Sbjct: 463 TTKKKENPIEDELIYRVGTRGRDKGEFTNIQGISASSNGRIVVADSNNQCIQVFSNDGQF 522
Query: 89 KTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
K P G+ V + I+VAD N + +F SDG F K G AG+
Sbjct: 523 KMRFGVRGRSPGQLQRPTGVTVDMNGDIIVADYDNRWISIFSSDGKFKNKIG-----AGR 577
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
L P +AV +I +D N +F +FQS+G V KFG+ G PH+
Sbjct: 578 LMGPKGVAVDKNGHIITAD--NKACCVF-----IFQSNGKLVTKFGARGTSDRHFAGPHF 630
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
+AV+N N ++V+D +NH V++++ +G + FGS G GQ P GVAVD G I V D
Sbjct: 631 VAVNNKNEIVVTDFHNHSVKVYNADGEFLFKFGSHGEGNGQFNAPTGVAVDTNGNIIVAD 690
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GN+RIQ+F G FL S D + G +G+A+ ++G++ V D NH +V+
Sbjct: 691 WGNSRIQVFDSSGSFLSYINT--SADPLY-GPQGLALTADGHVAVADSGNHCFKVY 743
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 660 FKFGSHGEGNGQFNAPTGVAVDTNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 713
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D + VADS NH +V++
Sbjct: 714 DPLYGPQGLALTADGHVAVADSGNHCFKVYR 744
>gi|219851408|ref|YP_002465840.1| carbohydrate binding family 6 [Methanosphaerula palustris E1-9c]
gi|219545667|gb|ACL16117.1| Carbohydrate binding family 6 [Methanosphaerula palustris E1-9c]
Length = 627
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 150/289 (51%), Gaps = 29/289 (10%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--------- 96
G+ GS G F +P+GIAV +I VAD+ N +VQ ++ F+
Sbjct: 39 GTNGSGDGQFNYPQGIAVDGAGNIYVADNGNKQVQ------KFTSSGTFVTAWGTAGPED 92
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F+ P GIAV + ++ V D+ RVQ F GT + ++G+ G GQ P+ +AV
Sbjct: 93 DRFSEPSGIAVDSEGNVYVTDTGKFRVQKFTPTGTLITEWGTEGTGDGQFYSPNAVAVDG 152
Query: 155 TNRVIVSD----SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
V V+D + R+Q F S+GTFV K+ + G++ P IA +
Sbjct: 153 EGSVYVTDIRYSGSGPRIQ-------KFTSNGTFVTKWMTYGDEV-MYSQPMGIAADSAG 204
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
V V D R+ F G +++ +G+ GS +GQ P G+AVD +GY+ V + NR+Q
Sbjct: 205 SVYVVDLRRDRILKFTSTGTLLSEWGTTGSGDGQFNNPMGIAVDSEGYVYVTEPYANRVQ 264
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FTP+G F+ +G GSG+G+F G+AV S G + V D NHR+Q+F
Sbjct: 265 KFTPNGTFVTNWGTEGSGNGQFNNPRGIAVDSAGTVYVVDSNNHRVQIF 313
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 101/194 (52%), Gaps = 12/194 (6%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
F G +G+ G+ GQ +P IAV + V+D+ N +VQ F S GTFV +G
Sbjct: 34 FTGTWGTNGSGDGQFNYPQGIAVDGAGNIYVADNGNKQVQ-------KFTSSGTFVTAWG 86
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
+ G + + P IAV + V V+D+ RVQ F G +IT +G+EG+ +GQ P
Sbjct: 87 TAGPEDDRFSEPSGIAVDSEGNVYVTDTGKFRVQKFTPTGTLITEWGTEGTGDGQFYSPN 146
Query: 250 GVAVDDQGYISVGD---SGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
VAVD +G + V D SG+ RIQ FT +G F+ + +G + + G+A S G+
Sbjct: 147 AVAVDGEGSVYVTDIRYSGSGPRIQKFTSNGTFVTKWMTYGD-EVMYSQPMGIAADSAGS 205
Query: 306 ILVCDRENHRIQVF 319
+ V D RI F
Sbjct: 206 VYVVDLRRDRILKF 219
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 34 QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVAD----SSNHRVQVCFPHFDLK 89
++ L + G+ G+ G F P +AV + S+ V D S R+Q +
Sbjct: 121 KFTPTGTLITEWGTEGTGDGQFYSPNAVAVDGEGSVYVTDIRYSGSGPRIQKFTSNGTFV 180
Query: 90 TNCVF----LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE 145
T + + ++ P GIA S+ V D R+ F S GT + ++G+ G+ GQ
Sbjct: 181 TKWMTYGDEVMYSQPMGIAADSAGSVYVVDLRRDRILKFTSTGTLLSEWGTTGSGDGQFN 240
Query: 146 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
+P IAV + V V++ +RVQ F NG TFV +G+ G+ GQ +P IA
Sbjct: 241 NPMGIAVDSEGYVYVTEPYANRVQKFTPNG-------TFVTNWGTEGSGNGQFNNPRGIA 293
Query: 206 VSNTNRVIVSDSNNHRVQIFD 226
V + V V DSNNHRVQIF+
Sbjct: 294 VDSAGTVYVVDSNNHRVQIFE 314
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 76/167 (45%), Gaps = 19/167 (11%)
Query: 18 TLLVSGIGQVGTTPRSQ-YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSN 76
++ V+ I G+ PR Q + K + G E ++ P GIA S+ V D
Sbjct: 155 SVYVTDIRYSGSGPRIQKFTSNGTFVTKWMTYGDEV-MYSQPMGIAADSAGSVYVVDLRR 213
Query: 77 HRVQVCFPHFDLKTNCVFLA-----------FTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
R+ + L+ F P GIAV + + V + +RVQ F
Sbjct: 214 DRI------LKFTSTGTLLSEWGTTGSGDGQFNNPMGIAVDSEGYVYVTEPYANRVQKFT 267
Query: 126 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 172
+GTFV +G+ G+ GQ +P IAV + V V DSNNHRVQIF+
Sbjct: 268 PNGTFVTNWGTEGSGNGQFNNPRGIAVDSAGTVYVVDSNNHRVQIFE 314
>gi|353558899|sp|D3ZQG6.2|TRIM2_RAT RecName: Full=Tripartite motif-containing protein 2; AltName:
Full=E3 ubiquitin-protein ligase TRIM2
Length = 744
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 155/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F +DG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV+++N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNSSNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 704
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 705 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|148229109|ref|NP_001085492.1| tripartite motif containing 2 [Xenopus laevis]
gi|49117096|gb|AAH72842.1| MGC80218 protein [Xenopus laevis]
Length = 748
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 158/306 (51%), Gaps = 32/306 (10%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F +DG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSADGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK--- 194
G+L P ++V +IV D N +F +FQ +G V +FGS GN
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDKQ 621
Query: 195 -AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
AG L PH+ AV++ N +IV+D +NH V++F+ +G I FGS G GQ P GVAV
Sbjct: 622 FAGTLHGPHFAAVNSNNEIIVTDFHNHSVKVFNQDGEFILKFGSNGEGNGQFNAPTGVAV 681
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
D G I V D GN+RIQ+F G FL S D + G +G+++ S+G+++V D N
Sbjct: 682 DSNGNIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLSLTSDGHVVVADSGN 738
Query: 314 HRIQVF 319
H +V+
Sbjct: 739 HCFKVY 744
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
K GS G G F P G+AV + +I+VAD N R+QV FD + FL++
Sbjct: 661 LKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLSYINTSA 714
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+++ D +VVADS NH +V++
Sbjct: 715 DPLYGPQGLSLTSDGHVVVADSGNHCFKVYR 745
>gi|397504184|ref|XP_003822684.1| PREDICTED: tripartite motif-containing protein 2-like [Pan
paniscus]
Length = 279
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 151/288 (52%), Gaps = 24/288 (8%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F +G++G G FT +G+A + I++ADS+N VQ+ K+
Sbjct: 3 LSFILGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPG 62
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV P I++AD N V +F SDG F K GS G+L P ++V
Sbjct: 63 QLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS-----GKLMGPKGVSVDRN 117
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK----AGQLEHPHYIAVSNTNR 211
+IV D N +F +FQ +G V +FGS GN AG L+ PH+ AV++ N
Sbjct: 118 GHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQFAGTLDGPHFAAVNSNNE 170
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
+I++D +NH V++F+ G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 171 IIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 230
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL S D G +G+A+ S+G+++V D NH +V+
Sbjct: 231 FDGSGSFLSYINT--SAD-PLYGPQGLALTSDGHVVVADSGNHCFKVY 275
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC--FPHFDLKTNC 92
+ Q+ K GS G G F P G+AV + +I+VAD N R+QV F N
Sbjct: 184 FNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINT 243
Query: 93 VFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH +V++
Sbjct: 244 SADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 276
>gi|327291778|ref|XP_003230597.1| PREDICTED: tripartite motif-containing protein 3-like, partial
[Anolis carolinensis]
Length = 513
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 150/289 (51%), Gaps = 24/289 (8%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLKTNCVFLA- 96
L F++G+RG E G FT +GI+ IVVADS+N VQ+ F L+ +
Sbjct: 236 ELIFRVGTRGREKGEFTNLQGISTSSSGRIVVADSNNQCVQIFSNEGQFRLRFGVRGRSP 295
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
P G+ V + I++AD N V +F +G F K G AG+L P +AV
Sbjct: 296 GQLQRPTGVTVDLNGDIIIADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDR 350
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK----AGQLEHPHYIAVSNTN 210
+IV D N +F +FQS+G V KFGS G AG L+ PH++AV+N N
Sbjct: 351 NGHIIVVD--NKACCVF-----IFQSNGKLVTKFGSRGTSERQFAGTLDGPHFVAVNNKN 403
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ
Sbjct: 404 EIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQ 463
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 464 VFDSSGSFLSYINTTAD---PLYGPQGLALTSDGHVVVADSGNHCFKAY 509
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ +I G+ G E+G+ +G++ G I V DS N +QIF+ +GQF FG G
Sbjct: 233 IEDELIFRVGTRGREKGEFTNLQGISTSSSGRIVVADSNNQCVQIFSNEGQFRLRFGVRG 292
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GV V NG+I++ D +N + +F
Sbjct: 293 RSPGQLQRPTGVTVDLNGDIIIADYDNRWVSIF 325
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWP 100
FK GS G G F P G+AV + +I+VAD N R+QV F N P
Sbjct: 426 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTTADPLYGP 485
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
+G+A+ D +VVADS NH + ++
Sbjct: 486 QGLALTSDGHVVVADSGNHCFKAYR 510
>gi|344239884|gb|EGV95987.1| Tripartite motif-containing protein 2 [Cricetulus griseus]
Length = 744
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F +DG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 704
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 705 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|444724164|gb|ELW64779.1| Tripartite motif-containing protein 2 [Tupaia chinensis]
Length = 786
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 153/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 496 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 555
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 556 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 614
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D+ V IF NG+ V +FGS GN Q
Sbjct: 615 ----GKLMGPKGVSVDRNGHIIVVDNKACCVCIFQPNGKA-------VTRFGSRGNGDRQ 663
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 664 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 723
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 724 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 780
Query: 318 VF 319
V+
Sbjct: 781 VY 782
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 693 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 746
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 747 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 783
>gi|157818847|ref|NP_001102022.1| tripartite motif-containing protein 2 [Rattus norvegicus]
gi|149048249|gb|EDM00825.1| tripartite motif protein 2 [Rattus norvegicus]
Length = 761
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 155/302 (51%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 471 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 530
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F +DG F K GS
Sbjct: 531 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGS- 589
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 590 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 638
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV+++N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 639 FAGPHFAAVNSSNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 698
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 699 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 755
Query: 318 VF 319
V+
Sbjct: 756 VY 757
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 668 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 721
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 722 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 758
>gi|395542524|ref|XP_003773179.1| PREDICTED: tripartite motif-containing protein 2 [Sarcophilus
harrisii]
Length = 744
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTTGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPCGDIIIADYDNKWVSIFSSDGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 704
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 705 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|13477123|gb|AAH05016.1| Unknown (protein for IMAGE:3636175), partial [Homo sapiens]
Length = 324
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 152/297 (51%), Gaps = 28/297 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQ+
Sbjct: 26 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF 85
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 86 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 144
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 145 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 193
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 194 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 253
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH
Sbjct: 254 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNH 307
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/223 (39%), Positives = 125/223 (56%), Gaps = 12/223 (5%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT +G+A + I++ADS+N VQ+F +DG F +FG G GQL+ P +AV +
Sbjct: 58 FTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSG 117
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+I++D +N V IF SDG F K GS G+L P ++V +IV D
Sbjct: 118 DIIIADYDNKWVSIF-------SSDGKFKTKIGS-----GKLMGPKGVSVDRNGHIIVVD 165
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ V IF NG+++T FGS G+ + Q P AV+ I + D N+ +++F +G
Sbjct: 166 NKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQEG 225
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+F+ FG G G+G+F GVAV SNGNI+V D N RIQVF
Sbjct: 226 EFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVF 268
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%)
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+I G++G +G+ +GVA G I + DS N +QIF+ DGQF FG G G
Sbjct: 44 LIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPG 103
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ + GVAV +G+I++ D +N + +F
Sbjct: 104 QLQRPTGVAVHPSGDIIIADYDNKWVSIF 132
>gi|354474616|ref|XP_003499526.1| PREDICTED: tripartite motif-containing protein 2 isoform 2
[Cricetulus griseus]
Length = 770
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 480 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 539
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F +DG F K GS
Sbjct: 540 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGS- 598
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 599 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 647
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 648 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 707
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 708 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 764
Query: 318 VF 319
V+
Sbjct: 765 VY 766
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 677 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 730
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 731 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 767
>gi|354474614|ref|XP_003499525.1| PREDICTED: tripartite motif-containing protein 2 isoform 1
[Cricetulus griseus]
Length = 761
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 471 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 530
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F +DG F K GS
Sbjct: 531 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGS- 589
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 590 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 638
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 639 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 698
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 699 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 755
Query: 318 VF 319
V+
Sbjct: 756 VY 757
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 668 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 721
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 722 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 758
>gi|74216647|dbj|BAE37753.1| unnamed protein product [Mus musculus]
Length = 744
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F +DG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 704
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 705 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|411147439|ref|NP_001258655.1| tripartite motif-containing protein 2 isoform 2 [Mus musculus]
gi|411147441|ref|NP_001258656.1| tripartite motif-containing protein 2 isoform 2 [Mus musculus]
gi|411147445|ref|NP_001258657.1| tripartite motif-containing protein 2 isoform 2 [Mus musculus]
gi|21363036|sp|Q9ESN6.1|TRIM2_MOUSE RecName: Full=Tripartite motif-containing protein 2; AltName:
Full=E3 ubiquitin-protein ligase TRIM2; AltName:
Full=Neural activity-related RING finger protein
gi|12407365|gb|AAG53471.1|AF220017_1 tripartite motif protein TRIM2 [Mus musculus]
gi|11094232|dbj|BAB17634.1| neural activity-related ring finger protein [Mus musculus]
gi|26337329|dbj|BAC32350.1| unnamed protein product [Mus musculus]
gi|26347983|dbj|BAC37640.1| unnamed protein product [Mus musculus]
gi|37590666|gb|AAH58961.1| Tripartite motif-containing 2 [Mus musculus]
gi|74181085|dbj|BAE27812.1| unnamed protein product [Mus musculus]
gi|148683463|gb|EDL15410.1| tripartite motif protein 2, isoform CRA_c [Mus musculus]
Length = 744
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F +DG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 681
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 682 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 738
Query: 318 VF 319
V+
Sbjct: 739 VY 740
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 704
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 705 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>gi|154151143|ref|YP_001404761.1| NHL repeat-containing protein [Methanoregula boonei 6A8]
gi|153999695|gb|ABS56118.1| NHL repeat containing protein [Methanoregula boonei 6A8]
Length = 491
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 145/285 (50%), Gaps = 33/285 (11%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------- 95
+ GS GS G F+ P +A+ I V D+ N+R+QV FD N V
Sbjct: 35 QWGSSGSGNGQFSQPEEVAINTTGYIYVTDNQNNRIQV----FDPSGNYVSQWGSAGSGN 90
Query: 96 -AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F P GIAV + V D N R+Q F G +V ++G + G +AV+
Sbjct: 91 GKFEGPSGIAVNTTGYVYVTDYGNGRIQAFDPSGAYVTQWGGFYHLIG-------VAVNT 143
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
T V V+DS N+++++FD GT V +GS G+ GQ P I V+ T V
Sbjct: 144 TGYVYVADSGNNQIKVFD-------PSGTSVTLWGSAGSGNGQFNLPWVITVNTTGYAYV 196
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
SD NN+R+Q+F +G ++ +GS GS GQ P GVA+D GY+ V DS NNRIQ+F
Sbjct: 197 SDWNNNRIQVFGPSGNYVSQWGSAGSGNGQFDHPYGVAIDSTGYVYVADSVNNRIQVFDL 256
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G ++ WGSG F G+AV S G I V D N+RIQ F
Sbjct: 257 SGNYVTQ---WGSG---FNDPSGIAVNSTGYIYVADAGNNRIQEF 295
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 82/137 (59%), Gaps = 7/137 (5%)
Query: 183 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
T V ++GS G+ GQ P +A++ T + V+D+ N+R+Q+FD +G ++ +GS GS
Sbjct: 31 THVTQWGSSGSGNGQFSQPEEVAINTTGYIYVTDNQNNRIQVFDPSGNYVSQWGSAGSGN 90
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMS 302
G+ + P G+AV+ GY+ V D GN RIQ F P G ++ +G F L GVAV +
Sbjct: 91 GKFEGPSGIAVNTTGYVYVTDYGNGRIQAFDPSGAYVTQWGG-------FYHLIGVAVNT 143
Query: 303 NGNILVCDRENHRIQVF 319
G + V D N++I+VF
Sbjct: 144 TGYVYVADSGNNQIKVF 160
>gi|119625366|gb|EAX04961.1| tripartite motif-containing 2, isoform CRA_b [Homo sapiens]
Length = 783
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 152/297 (51%), Gaps = 28/297 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQ+
Sbjct: 480 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIF 539
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 540 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 598
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 599 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 647
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 648 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 707
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH
Sbjct: 708 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNH 761
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/223 (39%), Positives = 125/223 (56%), Gaps = 12/223 (5%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT +G+A + I++ADS+N VQ+F +DG F +FG G GQL+ P +AV +
Sbjct: 512 FTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSG 571
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+I++D +N V IF SDG F K GS G+L P ++V +IV D
Sbjct: 572 DIIIADYDNKWVSIFS-------SDGKFKTKIGS-----GKLMGPKGVSVDRNGHIIVVD 619
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ V IF NG+++T FGS G+ + Q P AV+ I + D N+ +++F +G
Sbjct: 620 NKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQEG 679
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+F+ FG G G+G+F GVAV SNGNI+V D N RIQVF
Sbjct: 680 EFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVF 722
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 12/234 (5%)
Query: 42 QFK--IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
QFK G RG PG P G+AV P I++AD N V + KT
Sbjct: 544 QFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGSGKLMG 603
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G++V + I+V D+ V +FQ +G V +FGS GN Q PH+ AV++ N +I
Sbjct: 604 PKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEII 663
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
++D +NH V +VF +G F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 664 ITDFHNHSV-------KVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGN 716
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
R+Q+FD +G ++ + L P+G+A+ G++ V DSGN+ + T
Sbjct: 717 SRIQVFDGSGSFLSYINTSADP---LYGPQGLALTSDGHVVVADSGNHFLHSLT 767
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%)
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+I G++G +G+ +GVA G I + DS N +QIF+ DGQF FG G G
Sbjct: 498 LIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPG 557
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ + GVAV +G+I++ D +N + +F
Sbjct: 558 QLQRPTGVAVHPSGDIIIADYDNKWVSIF 586
>gi|411147437|ref|NP_001258654.1| tripartite motif-containing protein 2 isoform 1 [Mus musculus]
Length = 770
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 480 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 539
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F +DG F K GS
Sbjct: 540 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGS- 598
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 599 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 647
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 648 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 707
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 708 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 764
Query: 318 VF 319
V+
Sbjct: 765 VY 766
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 677 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 730
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 731 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 767
>gi|411147443|ref|NP_109631.2| tripartite motif-containing protein 2 isoform 3 [Mus musculus]
gi|74184522|dbj|BAE27883.1| unnamed protein product [Mus musculus]
Length = 761
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 471 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 530
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F +DG F K GS
Sbjct: 531 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGS- 589
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 590 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 638
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 639 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 698
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 699 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 755
Query: 318 VF 319
V+
Sbjct: 756 VY 757
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 668 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 721
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 722 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 758
>gi|148683462|gb|EDL15409.1| tripartite motif protein 2, isoform CRA_b [Mus musculus]
Length = 761
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 471 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 530
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F +DG F K GS
Sbjct: 531 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGS- 589
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 590 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 638
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 639 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 698
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 699 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 755
Query: 318 VF 319
V+
Sbjct: 756 VY 757
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 668 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 721
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 722 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 758
>gi|60360046|dbj|BAD90242.1| mKIAA0517 protein [Mus musculus]
Length = 787
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 497 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 556
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F +DG F K GS
Sbjct: 557 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGS- 615
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 616 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 664
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 665 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 724
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 725 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 781
Query: 318 VF 319
V+
Sbjct: 782 VY 783
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 694 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 747
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 748 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 784
>gi|73978313|ref|XP_532694.2| PREDICTED: tripartite motif-containing protein 2 [Canis lupus
familiaris]
Length = 684
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 151/293 (51%), Gaps = 24/293 (8%)
Query: 36 LQKRRLQFKI----GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN 91
LQ+R QF + ++G G FT +G+A I++ADS+N VQ+ K+
Sbjct: 403 LQERHFQFPVPPQRSTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSR 462
Query: 92 CVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH 146
P G+AV P I++AD N V +F SDG F K GS G+L
Sbjct: 463 FGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS-----GKLMG 517
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
P ++V +IV D N +F +FQ +G V +FGS GN Q PH+ AV
Sbjct: 518 PKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQFAGPHFAAV 570
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G I V D GN
Sbjct: 571 NSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGN 630
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +V+
Sbjct: 631 SRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFKVY 680
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 591 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 644
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 645 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 681
>gi|74194308|dbj|BAE24679.1| unnamed protein product [Mus musculus]
Length = 770
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 154/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 480 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 539
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F +DG F K GS
Sbjct: 540 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGS- 598
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 599 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 647
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 648 FAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 707
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
+ V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 708 NVIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 764
Query: 318 VF 319
V+
Sbjct: 765 VY 766
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +++VAD N R+QV FD + FL+
Sbjct: 677 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNVIVADWGNSRIQV----FDGSGS--FLS 730
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 731 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 767
>gi|395526430|ref|XP_003765366.1| PREDICTED: tripartite motif-containing protein 3 [Sarcophilus
harrisii]
Length = 744
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 146/285 (51%), Gaps = 22/285 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP---HFDLKTNCVFLA- 96
L F++GSRG E G FT +GI+ IVVADS+N +QV F F L+ +
Sbjct: 472 LVFRVGSRGREKGEFTNLQGISAASSGRIVVADSNNQCIQV-FSNEGQFKLRFGVRGRSP 530
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
P G+AV + I+VAD N V VF +G F K G AG+L P +AV
Sbjct: 531 GQLQRPTGVAVDTNGDIIVADYDNRWVSVFSPEGKFKTKIG-----AGRLMGPKGVAVDR 585
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V
Sbjct: 586 NGHIIVVD--NKACCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVV 638
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 639 TDFHNHSVKVYSADGDFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDS 698
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G +G+A+ S+G+++V D NH + +
Sbjct: 699 TGSFLSYINTTAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +G++ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGISAASSGRIVVADSNNQCIQVFSNEGQFKLRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + VF
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSVF 560
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 16/136 (11%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---- 95
+L + G RG+ F P +AV N IVV D NH V+V + + +F
Sbjct: 607 KLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKV----YSADGDFLFKFGSH 662
Query: 96 -----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
F P G+AV + +I+VAD N R+QVF S G+F+ + A L P +
Sbjct: 663 GEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSTGSFLSYINTT---AEPLYGPQGL 719
Query: 151 AVSNTNRVIVSDSNNH 166
A+++ V+V+D+ NH
Sbjct: 720 ALTSDGHVVVADAGNH 735
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWP 100
FK GS G G F P G+AV + +I+VAD N R+QV F N P
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSTGSFLSYINTTAEPLYGP 716
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
+G+A+ D +VVAD+ NH + ++
Sbjct: 717 QGLALTSDGHVVVADAGNHCFKAYR 741
>gi|405973642|gb|EKC38343.1| Tripartite motif-containing protein 2 [Crassostrea gigas]
Length = 669
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 155/297 (52%), Gaps = 22/297 (7%)
Query: 28 GTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD 87
G+ RS ++ L ++G +G G F+ P+G+ V D I++ADS+N VQV + D
Sbjct: 386 GSNRRSNAIEDD-LVIRVGEKGRNKGEFSNPQGLHVVGD-KIIIADSNNQTVQVFNSNGD 443
Query: 88 LKTNC-----VFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
K V P GIA + + +VAD N + VF +G ++ K G+ G
Sbjct: 444 CKLKFGSPGRVAGKMQRPTGIASTLNGNYLVADYDNKWISVFSPEGKYMNKIGT-----G 498
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
+L P +AV +IV D N IF +FQS+G + KFGS GN Q PH
Sbjct: 499 KLLGPKGVAVDRNGHIIVID--NKGSCIF-----IFQSNGKLISKFGSRGNHDWQFAGPH 551
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
Y+A++ N +IVSD +NH +++FD G + +FGS G GQ P GVAVD +G I V
Sbjct: 552 YVAINANNDIIVSDFHNHCIKVFDSEGNFLFTFGSNGEGNGQFNAPTGVAVDQKGNILVA 611
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D GN+RIQ+F G FL + G +G+AV S+G + V D NH +++
Sbjct: 612 DWGNSRIQVFDSSGSFLSFV---NTAADPLYGPQGLAVTSDGYVAVADSGNHCFKIY 665
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
F GS G G F P G+AV +I+VAD N R+QV FD ++ FL+F
Sbjct: 582 FTFGSNGEGNGQFNAPTGVAVDQKGNILVADWGNSRIQV----FD--SSGSFLSFVNTAA 635
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+AV D + VADS NH ++++
Sbjct: 636 DPLYGPQGLAVTSDGYVAVADSGNHCFKIYK 666
>gi|432329836|ref|YP_007247979.1| hypothetical protein Metfor_0399 [Methanoregula formicicum SMSP]
gi|432136545|gb|AGB01472.1| hypothetical protein Metfor_0399 [Methanoregula formicicum SMSP]
Length = 711
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 159/314 (50%), Gaps = 30/314 (9%)
Query: 18 TLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNH 77
+L+ +G+ G+ Y+ + G+ G+ G F G+A ++ VAD N
Sbjct: 128 SLMKAGVSASGSPDPESYV----YAMQWGTSGTSTGQFNNIEGMAEDGSGNVYVADGKNS 183
Query: 78 RVQVCFPHFDLKTNCVFLA-----------FTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
R+Q L+++ +LA F GIAV P +I D N RVQ F
Sbjct: 184 RIQ------KLRSDGTYLAQWGTNGSGTGQFYMISGIAVDPSGNIYAVDMGNSRVQKFGP 237
Query: 127 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN-NHRVQIFDVNGRVFQSDGTFV 185
+GTF+ +G+ G GQ P IA V V++S+ N RVQ F S G+++
Sbjct: 238 NGTFLTHWGTQGAGNGQFYFPRSIATDTPGNVYVTESSANERVQ-------KFSSGGSYI 290
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL 245
++G+ G GQ + H +A + V V+DS+NHRVQ F +G+ I +G+ G+ GQ
Sbjct: 291 SQWGTEGTGNGQFNYLHGVATDTSGNVYVADSSNHRVQKFSSDGKYIAQWGTRGTGNGQF 350
Query: 246 KFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
P G+A D G + V D+ N+R+Q F DG ++ +G +G+G GEF +AV + G
Sbjct: 351 NRPYGIATDTSGNVYVVDTWNSRVQKFKSDGTYVTQWGTYGNGIGEFNFPYAIAVDTRGY 410
Query: 306 ILVCDRENHRIQVF 319
+ V D +N R+QVF
Sbjct: 411 VYVGD-DNDRVQVF 423
>gi|334331088|ref|XP_003341442.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
2-like [Monodelphis domestica]
Length = 791
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 153/302 (50%), Gaps = 28/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 501 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTAGKILIADSNNQCVQIF 560
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F DG F K GS
Sbjct: 561 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPCGDIIIADYDNKWVSIFSCDGKFKTKIGS- 619
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 620 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 668
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 669 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 728
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 729 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 785
Query: 318 VF 319
V+
Sbjct: 786 VY 787
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 698 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 751
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 752 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 788
>gi|126330157|ref|XP_001363305.1| PREDICTED: tripartite motif-containing protein 3 [Monodelphis
domestica]
Length = 744
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 146/285 (51%), Gaps = 22/285 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP---HFDLKTNCVFLA- 96
L F++GSRG E G FT +GI+ IVVADS+N +QV F F L+ +
Sbjct: 472 LVFRVGSRGREKGEFTNLQGISAANSGRIVVADSNNQCIQV-FSNEGQFKLRFGVRGRSP 530
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
P G+AV + I+VAD N V VF +G F K G AG+L P +AV
Sbjct: 531 GQLQRPTGVAVDTNGDIIVADYDNRWVSVFSPEGKFKTKIG-----AGRLMGPKGVAVDR 585
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V
Sbjct: 586 NGHIIVVD--NKACCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVV 638
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 639 TDFHNHSVKVYSADGDFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDS 698
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G +G+A+ S+G+++V D NH + +
Sbjct: 699 TGSFLSYINTTAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +G++ + G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGISAANSGRIVVADSNNQCIQVFSNEGQFKLRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + VF
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSVF 560
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 16/136 (11%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---- 95
+L + G RG+ F P +AV N IVV D NH V+V + + +F
Sbjct: 607 KLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKV----YSADGDFLFKFGSH 662
Query: 96 -----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
F P G+AV + +I+VAD N R+QVF S G+F+ + A L P +
Sbjct: 663 GEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSTGSFLSYINTT---AEPLYGPQGL 719
Query: 151 AVSNTNRVIVSDSNNH 166
A+++ V+V+D+ NH
Sbjct: 720 ALTSDGHVVVADAGNH 735
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWP 100
FK GS G G F P G+AV + +I+VAD N R+QV F N P
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSTGSFLSYINTTAEPLYGP 716
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
+G+A+ D +VVAD+ NH + ++
Sbjct: 717 QGLALTSDGHVVVADAGNHCFKAYR 741
>gi|428179253|gb|EKX48125.1| hypothetical protein GUITHDRAFT_68941 [Guillardia theta CCMP2712]
Length = 273
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 147/273 (53%), Gaps = 15/273 (5%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT------NCVFLAFTWPRGIAVG 106
G P +AV +IVV D +V LK+ N L W G+AV
Sbjct: 5 GKLQCPHCVAVDSAGNIVVVDCDGVKVFRGRDGTLLKSMGHRGSNITELHLPW--GVAVD 62
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
D+SI+ A+ + VF DG+ G G+ G+L+HP+ +AV ++V+D +N+
Sbjct: 63 QDDSIIAANVGEDNIVVFDKDGSVRRTVGRSGSGEGKLKHPYGVAVDGEGNIVVADYDNN 122
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
R+Q+F GR DG F+ G G+ G+L+ P +AV + ++V++S RV +F
Sbjct: 123 RLQLF---GR----DGRFLRAIGKKGSGEGELQQPWGVAVDSNGVIVVAESLGRRVAMFK 175
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+G I S GSE L PRG+A+D +G + V D +R+ +F DG F+R+FG G
Sbjct: 176 NDGTFIRSIRRWGSEGSALGRPRGLAIDMEGNVVVADWEMHRVLVFRQDGSFVRSFGGRG 235
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
SGDGE K GVAV GNI+V D ENHR+QVF
Sbjct: 236 SGDGELKHPCGVAVDGIGNIVVADYENHRVQVF 268
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 124/240 (51%), Gaps = 12/240 (5%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L +G RGS P G+AV D+SI+ A+ + V ++
Sbjct: 39 LLKSMGHRGSNITELHLPWGVAVDQDDSIIAANVGEDNIVVFDKDGSVRRTVGRSGSGEG 98
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + +IVVAD N+R+Q+F DG F+ G G+ G+L+ P +AV +
Sbjct: 99 KLKHPYGVAVDGEGNIVVADYDNNRLQLFGRDGRFLRAIGKKGSGEGELQQPWGVAVDSN 158
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
++V++S RV +F ++DGTF+ G++ L P +A+ V+V+
Sbjct: 159 GVIVVAESLGRRVAMF-------KNDGTFIRSIRRWGSEGSALGRPRGLAIDMEGNVVVA 211
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D HRV +F +G + SFG GS +G+LK P GVAVD G I V D N+R+Q+F+ +
Sbjct: 212 DWEMHRVLVFRQDGSFVRSFGGRGSGDGELKHPCGVAVDGIGNIVVADYENHRVQVFSAE 271
Score = 37.4 bits (85), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 24/42 (57%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD 87
G RGS G P G+AV +IVVAD NHRVQV F+
Sbjct: 232 GGRGSGDGELKHPCGVAVDGIGNIVVADYENHRVQVFSAEFE 273
>gi|440804415|gb|ELR25292.1| NHL repeat-containing protein [Acanthamoeba castellanii str. Neff]
Length = 445
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/297 (40%), Positives = 156/297 (52%), Gaps = 30/297 (10%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNS---IVVADSSNHRVQVCFPHFDLKTN-----CVFLAF 97
G+RGS F+ P G+A+ +VVAD +NHRVQV L+ F
Sbjct: 152 GTRGSADAQFSAPCGLAIAQGQGGGLVVVADHNNHRVQVFDAEGRLRAKFGGEGSALGRF 211
Query: 98 TWPRGIAV-----GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
PRG+A G ++VAD NHRVQVF G FG+ G + GQLE P +AV
Sbjct: 212 YHPRGVATLAVGGGGRLVVLVADRDNHRVQVFDDQGRVQSAFGTQGRRHGQLEQPWGVAV 271
Query: 153 --SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
+ V VSDS NHRVQ FD+ G S FG+ G++ GQL+ P IAV
Sbjct: 272 DPQRGHAVFVSDSGNHRVQAFDLQGNHLHS-------FGAQGDQPGQLQQPCGIAVDRRR 324
Query: 211 RVI-VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ-------GYISVG 262
++ V+D++NHRVQ+FD GR + FG EG+ EG+ +FPR + V D V
Sbjct: 325 GLVWVADTDNHRVQVFDGQGRFLRGFGGEGAGEGRFQFPRDIVVVDGDDDDDDDSTTRVY 384
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ N+R+Q+F G FL A G G +G F GVAV S G + V D NHR+QVF
Sbjct: 385 VTDNHRVQMFDGHGWFLGAIGREGRAEGCFDHPRGVAVDSQGRVFVADSANHRVQVF 441
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 140/261 (53%), Gaps = 41/261 (15%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAV-----GPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
RL+ K G GS G F PRG+A G ++VAD NHRVQV FD + V
Sbjct: 196 RLRAKFGGEGSALGRFYHPRGVATLAVGGGGRLVVLVADRDNHRVQV----FDDQGR-VQ 250
Query: 95 LAF----------TWPRGIAVGPD--NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
AF P G+AV P +++ V+DS NHRVQ F G + FG+ G++ G
Sbjct: 251 SAFGTQGRRHGQLEQPWGVAVDPQRGHAVFVSDSGNHRVQAFDLQGNHLHSFGAQGDQPG 310
Query: 143 QLEHPHYIAVSNTNRVI-VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP 201
QL+ P IAV ++ V+D++NHRVQ+FD GR F+ FG G G+ + P
Sbjct: 311 QLQQPCGIAVDRRRGLVWVADTDNHRVQVFDGQGR-------FLRGFGGEGAGEGRFQFP 363
Query: 202 HYIAVS---------NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
I V +T RV V+D NHRVQ+FD +G + + G EG EG PRGVA
Sbjct: 364 RDIVVVDGDDDDDDDSTTRVYVTD--NHRVQMFDGHGWFLGAIGREGRAEGCFDHPRGVA 421
Query: 253 VDDQGYISVGDSGNNRIQIFT 273
VD QG + V DS N+R+Q+FT
Sbjct: 422 VDSQGRVFVADSANHRVQVFT 442
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 176 RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN---RVIVSDSNNHRVQIFDVNGRVI 232
R + G FV +G+ G+ Q P +A++ V+V+D NNHRVQ+FD GR+
Sbjct: 139 RALRPRGRFVRAWGTRGSADAQFSAPCGLAIAQGQGGGLVVVADHNNHRVQVFDAEGRLR 198
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQG-----YISVGDSGNNRIQIFTPDGQFLRAFGCWGS 287
FG EGS G+ PRGVA G + V D N+R+Q+F G+ AFG G
Sbjct: 199 AKFGGEGSALGRFYHPRGVATLAVGGGGRLVVLVADRDNHRVQVFDDQGRVQSAFGTQGR 258
Query: 288 GDGEFKGLEGVAV--MSNGNILVCDRENHRIQVF 319
G+ + GVAV + V D NHR+Q F
Sbjct: 259 RHGQLEQPWGVAVDPQRGHAVFVSDSGNHRVQAF 292
>gi|291221599|ref|XP_002730807.1| PREDICTED: tripartite motif protein 2-like, partial [Saccoglossus
kowalevskii]
Length = 686
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 160/299 (53%), Gaps = 29/299 (9%)
Query: 32 RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNS-IVVADSSNHRVQVCFPHFDLKT 90
++ ++K +L +++ E G F WP G+A D +V+ D N R+Q+ + D K
Sbjct: 402 KAAEMRKTKLMYELNDSTHEGGEFDWPSGVASTEDGEYVVITDRDNDRIQI--YNRDGKF 459
Query: 91 NCVFLA-------FTWPRGIAVGPDNS--IVVADSSNHRVQVFQSDGTFVGKFGSMGNKA 141
C F + F P +A+ ++ + + D NHRVQ F G ++ FG G
Sbjct: 460 ECKFGSRGKRNGQFELPLDVAISEEDEPCVYITDEYNHRVQKFTLYGRYMFHFGDNGT-- 517
Query: 142 GQLEHPHYIAVSNTN-RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
L+ P+ IAV N R++V+D HRV I D+ DG + KFGS G+++ +
Sbjct: 518 --LKQPYGIAVDNKKGRIVVTDIGWHRVTIHDL-------DGKLIHKFGSRGDESCKFNE 568
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
P Y+A+ + NR+I+SD NH V+IFD +G+ I + GS G+ GQ P GV +D++G I
Sbjct: 569 PRYVAMDD-NRIIISDHCNHCVKIFDTSGKYIHTIGSCGTGRGQFIGPTGVCIDNRGNII 627
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V D +R+Q+F+P+G+F+R G G G+A+ +G ++V + H++ F
Sbjct: 628 VADCA-DRVQLFSPEGEFIRLIVSEVDG---ISGPLGMAITQDGLLVVTNLGTHKVNTF 682
>gi|221042410|dbj|BAH12882.1| unnamed protein product [Homo sapiens]
Length = 625
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 142/284 (50%), Gaps = 20/284 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 353 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 412
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 413 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 467
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 468 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 520
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 521 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 580
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G +G+A+ S+G+++V D NH + +
Sbjct: 581 GSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 621
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 399 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 458
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 459 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 518
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 519 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 571
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 572 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 621
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 349 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 408
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 409 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 441
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 538 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 591
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 592 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 622
>gi|351721595|ref|NP_001234936.1| tripartite motif-containing protein 3 isoform 2 [Homo sapiens]
gi|397496615|ref|XP_003819127.1| PREDICTED: tripartite motif-containing protein 3 isoform 5 [Pan
paniscus]
Length = 625
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 142/284 (50%), Gaps = 20/284 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 353 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 412
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 413 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 467
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 468 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 520
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 521 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 580
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G +G+A+ S+G+++V D NH + +
Sbjct: 581 GSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 621
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 399 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 458
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 459 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 518
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 519 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 571
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 572 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 621
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 349 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 408
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 409 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 441
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 538 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 591
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 592 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 622
>gi|403254105|ref|XP_003919819.1| PREDICTED: tripartite motif-containing protein 3 isoform 5 [Saimiri
boliviensis boliviensis]
Length = 649
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 142/284 (50%), Gaps = 20/284 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 377 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 436
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 437 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 491
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 492 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 544
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 545 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 604
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G +G+A+ S+G+++V D NH + +
Sbjct: 605 GSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 645
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 423 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 482
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 483 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 542
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 543 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 595
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 596 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 645
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 373 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 432
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 433 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 465
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 562 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 615
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 616 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 646
>gi|327274049|ref|XP_003221791.1| PREDICTED: tripartite motif-containing protein 2-like [Anolis
carolinensis]
Length = 748
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 156/306 (50%), Gaps = 32/306 (10%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A + I++ADS+N VQV
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQVF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 514 STDGQFKSRFGIRGRSPGQLQRPTGVAVHPCGDIIIADYDNKWVSIFSSDGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK--- 194
G+L P ++V +IV D N +F +FQ +G V +FGS GN
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDKQ 621
Query: 195 -AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
AG PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAV
Sbjct: 622 FAGIYHGPHFAAVNHNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAV 681
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
D G I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D N
Sbjct: 682 DSNGNIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGN 738
Query: 314 HRIQVF 319
H +V+
Sbjct: 739 HCFKVY 744
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 655 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 708
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 709 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 745
>gi|296217395|ref|XP_002754991.1| PREDICTED: tripartite motif-containing protein 3 isoform 4
[Callithrix jacchus]
Length = 649
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 142/284 (50%), Gaps = 20/284 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 377 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 436
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 437 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 491
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 492 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 544
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 545 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 604
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G +G+A+ S+G+++V D NH + +
Sbjct: 605 GSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 645
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 423 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 482
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 483 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 542
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 543 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 595
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 596 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 645
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 373 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 432
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 433 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 465
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 562 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 615
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 616 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 646
>gi|291230141|ref|XP_002735026.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 728
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 145/284 (51%), Gaps = 20/284 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L +IG +G F P+ +A ++V DS N+ VQV + D K
Sbjct: 456 LLLRIGMKGRNKAEFMNPQCVACSATGRLIVTDSGNNSVQVFVNNCDFKMKFGIRGRNPG 515
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G A+ + + ++AD N V +F DG F K G+ G+L+ P ++V
Sbjct: 516 QLQRPTGCAIMANGNYLIADYDNKMVSMFTPDGKFASKIGT-----GRLQGPKGVSVDRN 570
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+I+ D+ N ++ IF+ NG++ +FGS G QL PH+ A+++ N +IVS
Sbjct: 571 GNIIIVDNKNSQILIFNPNGKLL-------NRFGSRGMDESQLCGPHFTAINSNNEIIVS 623
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH +++FD G+ I FGS G GQ P GVAVD I V D GN+RIQ+F +
Sbjct: 624 DFHNHCIKVFDAEGQFIMKFGSNGEGNGQFNAPTGVAVDSLDNIIVADWGNSRIQVFDSN 683
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL + G +G+A+ S+GNI V D N+ ++++
Sbjct: 684 GSFLSYI---NTNADPLYGPQGLAITSDGNIAVADSGNYCVKIY 724
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 16/141 (11%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---- 95
+L + GSRG + P A+ +N I+V+D NH ++V FD + +
Sbjct: 591 KLLNRFGSRGMDESQLCGPHFTAINSNNEIIVSDFHNHCIKV----FDAEGQFIMKFGSN 646
Query: 96 -----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
F P G+AV ++I+VAD N R+QVF S+G+F+ + A L P +
Sbjct: 647 GEGNGQFNAPTGVAVDSLDNIIVADWGNSRIQVFDSNGSFLSYINT---NADPLYGPQGL 703
Query: 151 AVSNTNRVIVSDSNNHRVQIF 171
A+++ + V+DS N+ V+I+
Sbjct: 704 AITSDGNIAVADSGNYCVKIY 724
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
K GS G G F P G+AV ++I+VAD N R+QV FD +N FL++
Sbjct: 641 MKFGSNGEGNGQFNAPTGVAVDSLDNIIVADWGNSRIQV----FD--SNGSFLSYINTNA 694
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +I VADS N+ V++++
Sbjct: 695 DPLYGPQGLAITSDGNIAVADSGNYCVKIYK 725
>gi|402894375|ref|XP_003910338.1| PREDICTED: tripartite motif-containing protein 3 isoform 4 [Papio
anubis]
Length = 649
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 142/284 (50%), Gaps = 20/284 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 377 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 436
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 437 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 491
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 492 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 544
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 545 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 604
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G +G+A+ S+G+++V D NH + +
Sbjct: 605 GSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 645
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 423 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 482
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 483 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 542
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 543 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 595
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 596 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 645
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 373 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 432
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 433 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 465
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 562 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 615
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 616 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 646
>gi|350420721|ref|XP_003492601.1| PREDICTED: tripartite motif-containing protein 71-like [Bombus
impatiens]
Length = 746
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 127/223 (56%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+A IVVAD SN+R+Q+++ DG+F+ +FG+ G G + P +AV R+I
Sbjct: 484 PWGVACDEKGHIVVADRSNNRIQIYKQDGSFLRRFGAYGTGPGYFDRPAGVAVDARRRII 543
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+QI + DG F+ FG G++ GQ +P +AV+ ++ VSD+ N
Sbjct: 544 VADKDNHRIQILTM-------DGQFLLCFGEKGSRCGQFNYPWDVAVNGECQIAVSDTRN 596
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKF--PRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
HRVQ+F G + +G E S F PRGVA + QG + D N+R+ + D
Sbjct: 597 HRVQLFSPEGTFLRKYGFEASPNMWKHFDSPRGVAFNPQGKVVTTDFNNHRLVVIDADFV 656
Query: 278 FLRAFGCW-GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ F C G+ +F +G+A+ +GNI+V D NHRIQ+F
Sbjct: 657 TAKIFECKVAGGNKQFLRPQGLAIDDDGNIIVADSRNHRIQIF 699
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 150/291 (51%), Gaps = 31/291 (10%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------- 96
IG+ G P G+A IVVAD SN+R+Q+ K + FL
Sbjct: 471 IGNSGDIDDNLCRPWGVACDEKGHIVVADRSNNRIQI------YKQDGSFLRRFGAYGTG 524
Query: 97 ---FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F P G+AV I+VAD NHR+Q+ DG F+ FG G++ GQ +P +AV+
Sbjct: 525 PGYFDRPAGVAVDARRRIIVADKDNHRIQILTMDGQFLLCFGEKGSRCGQFNYPWDVAVN 584
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVSNTNR 211
++ VSD+ NHRVQ+ F +GTF+ K+G + N + P +A + +
Sbjct: 585 GECQIAVSDTRNHRVQL-------FSPEGTFLRKYGFEASPNMWKHFDSPRGVAFNPQGK 637
Query: 212 VIVSDSNNHRVQIFD---VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
V+ +D NNHR+ + D V ++ + G++ Q P+G+A+DD G I V DS N+R
Sbjct: 638 VVTTDFNNHRLVVIDADFVTAKIFECKVAGGNK--QFLRPQGLAIDDDGNIIVADSRNHR 695
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
IQIF G ++ +G +G GD E G+++ +G I V D N+R+ +
Sbjct: 696 IQIFDKSGMLIKRYGSYGKGDEEMDRPSGISLCPDGKIAVVDFGNNRLLLI 746
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 131/251 (52%), Gaps = 25/251 (9%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y Q + G+ G+ PG F P G+AV I+VAD NHR+Q+ L + F
Sbjct: 508 YKQDGSFLRRFGAYGTGPGYFDRPAGVAVDARRRIIVADKDNHRIQI------LTMDGQF 561
Query: 95 L-----------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG--SMGNKA 141
L F +P +AV + I V+D+ NHRVQ+F +GTF+ K+G + N
Sbjct: 562 LLCFGEKGSRCGQFNYPWDVAVNGECQIAVSDTRNHRVQLFSPEGTFLRKYGFEASPNMW 621
Query: 142 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP 201
+ P +A + +V+ +D NNHR+ + D + F + F K GNK Q P
Sbjct: 622 KHFDSPRGVAFNPQGKVVTTDFNNHRLVVIDAD---FVTAKIFECKVAG-GNK--QFLRP 675
Query: 202 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISV 261
+A+ + +IV+DS NHR+QIFD +G +I +GS G + ++ P G+++ G I+V
Sbjct: 676 QGLAIDDDGNIIVADSRNHRIQIFDKSGMLIKRYGSYGKGDEEMDRPSGISLCPDGKIAV 735
Query: 262 GDSGNNRIQIF 272
D GNNR+ +
Sbjct: 736 VDFGNNRLLLI 746
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 58/94 (61%)
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
DV + T G+ G + L P GVA D++G+I V D NNRIQI+ DG FLR FG +
Sbjct: 462 DVPMKAPTIIGNSGDIDDNLCRPWGVACDEKGHIVVADRSNNRIQIYKQDGSFLRRFGAY 521
Query: 286 GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+G G F GVAV + I+V D++NHRIQ+
Sbjct: 522 GTGPGYFDRPAGVAVDARRRIIVADKDNHRIQIL 555
>gi|395815121|ref|XP_003781084.1| PREDICTED: tripartite motif-containing protein 3 isoform 3
[Otolemur garnettii]
Length = 649
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 142/284 (50%), Gaps = 20/284 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 377 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 436
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 437 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 491
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 492 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 544
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 545 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 604
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G +G+A+ S+G+++V D NH + +
Sbjct: 605 GSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 645
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 423 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 482
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 483 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 542
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 543 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 595
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 596 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 645
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 373 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 432
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 433 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 465
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 562 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 615
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 616 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 646
>gi|441645865|ref|XP_004093049.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
3 [Nomascus leucogenys]
Length = 649
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 142/284 (50%), Gaps = 20/284 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 377 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 436
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 437 QLQRPTGVAVDTNGDIIVADYDNRWVSIFXPEGKFKTKIG-----AGRLMGPKGVAVDRN 491
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 492 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 544
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 545 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 604
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G +G+A+ S+G+++V D NH + +
Sbjct: 605 GSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 645
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 423 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFXPEGKFKTKIGAGRLMG 482
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 483 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 542
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 543 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 595
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 596 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 645
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 373 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 432
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 433 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 465
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 562 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 615
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 616 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 646
>gi|426367250|ref|XP_004050646.1| PREDICTED: tripartite motif-containing protein 3 [Gorilla gorilla
gorilla]
Length = 649
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 142/284 (50%), Gaps = 20/284 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 377 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 436
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 437 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 491
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 492 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 544
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 545 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 604
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G +G+A+ S+G+++V D NH + +
Sbjct: 605 GSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 645
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 423 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 482
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 483 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 542
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 543 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 595
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 596 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 645
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 373 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 432
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 433 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 465
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 562 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 615
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 616 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 646
>gi|443708151|gb|ELU03406.1| hypothetical protein CAPTEDRAFT_168454 [Capitella teleta]
Length = 738
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 148/284 (52%), Gaps = 21/284 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNC---VFL 95
L +G +G G FT P+G+ D ++VADS+N VQV C F L+
Sbjct: 467 LVLSVGMKGRAKGEFTNPQGVCCYKDR-VLVADSNNQCVQVFTCGGDFKLRFGTRGRQVG 525
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + + +VAD N V VF DG ++ K G+ G+L P I V +
Sbjct: 526 QLQRPTGVAVTLNGNYLVADYDNKWVSVFNPDGKYLNKIGT-----GKLLGPKGICVDHN 580
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F VFQS+G + KFG+ GN+ Q PH+ A+++ N +IVS
Sbjct: 581 GHIIVVD--NKASSVF-----VFQSNGKLLHKFGARGNEPHQFAGPHFCAINSRNDIIVS 633
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++D G ITSFG+ G GQ P GVAVD I V D GN+RIQ+F
Sbjct: 634 DFHNHCVKVYDCEGTFITSFGANGEGNGQFNAPTGVAVDKNDNILVADWGNSRIQVFDSS 693
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G G G +G+ + G ++V D NH ++++
Sbjct: 694 GSFLSYIHTAG---GPLYGPQGLDISPEGQVIVADSGNHCLKMY 734
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 14/88 (15%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW------ 99
G+ G G F P G+AV +++I+VAD N R+QV FD ++ FL++
Sbjct: 654 GANGEGNGQFNAPTGVAVDKNDNILVADWGNSRIQV----FD--SSGSFLSYIHTAGGPL 707
Query: 100 --PRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+ + P+ ++VADS NH +++++
Sbjct: 708 YGPQGLDISPEGQVIVADSGNHCLKMYK 735
>gi|119589116|gb|EAW68710.1| tripartite motif-containing 3, isoform CRA_b [Homo sapiens]
Length = 665
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 142/284 (50%), Gaps = 20/284 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 393 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 452
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 453 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 507
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 508 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 560
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 561 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 620
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G +G+A+ S+G+++V D NH + +
Sbjct: 621 GSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 661
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 439 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 498
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 499 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 558
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 559 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 611
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 612 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 661
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 389 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 448
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 449 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 481
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 578 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 631
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 632 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 662
>gi|297689407|ref|XP_002822134.1| PREDICTED: tripartite motif-containing protein 3 [Pongo abelii]
Length = 773
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 142/284 (50%), Gaps = 20/284 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 501 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 560
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 561 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 615
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 616 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 668
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 669 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 728
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G +G+A+ S+G+++V D NH + +
Sbjct: 729 GSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 769
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 547 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 606
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 607 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 666
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 667 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 719
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 720 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 769
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 497 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 556
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 557 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 589
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 686 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 739
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 740 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 770
>gi|431903399|gb|ELK09351.1| Tripartite motif-containing protein 3 [Pteropus alecto]
Length = 768
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 496 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 551
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 552 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 606
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 607 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 659
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 660 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 719
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 720 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 764
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 542 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 601
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 602 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 661
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 662 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 714
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 715 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 764
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 492 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 551
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 552 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 584
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 681 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 734
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 735 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 765
>gi|426244908|ref|XP_004016258.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
3 [Ovis aries]
Length = 732
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 460 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 515
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 516 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 570
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 571 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 623
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 624 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 683
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 684 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 728
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 506 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 565
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 566 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 625
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 626 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 678
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 679 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 728
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 456 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 515
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 516 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 548
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 645 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 698
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 699 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 729
>gi|33468961|ref|NP_061368.1| tripartite motif-containing protein 3 [Mus musculus]
gi|21363044|sp|Q9R1R2.1|TRIM3_MOUSE RecName: Full=Tripartite motif-containing protein 3; AltName:
Full=RING finger protein 22; AltName: Full=RING finger
protein HAC1
gi|12407369|gb|AAG53473.1|AF220019_1 tripartite motif protein TRIM3 [Mus musculus]
gi|5732193|dbj|BAA83343.1| RING finger protein HAC1 [Mus musculus]
gi|12859230|dbj|BAB31580.1| unnamed protein product [Mus musculus]
gi|21706538|gb|AAH34263.1| Trim3 protein [Mus musculus]
gi|74194823|dbj|BAE26003.1| unnamed protein product [Mus musculus]
gi|148684839|gb|EDL16786.1| tripartite motif protein 3, isoform CRA_a [Mus musculus]
gi|148684840|gb|EDL16787.1| tripartite motif protein 3, isoform CRA_a [Mus musculus]
gi|148684841|gb|EDL16788.1| tripartite motif protein 3, isoform CRA_a [Mus musculus]
Length = 744
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 696 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 691 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 711 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 741
>gi|149068478|gb|EDM18030.1| tripartite motif protein 3, isoform CRA_a [Rattus norvegicus]
gi|149068479|gb|EDM18031.1| tripartite motif protein 3, isoform CRA_a [Rattus norvegicus]
gi|149068480|gb|EDM18032.1| tripartite motif protein 3, isoform CRA_a [Rattus norvegicus]
gi|149068481|gb|EDM18033.1| tripartite motif protein 3, isoform CRA_a [Rattus norvegicus]
Length = 744
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 696 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 691 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 711 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 741
>gi|219852010|ref|YP_002466442.1| periplasmic copper-binding protein [Methanosphaerula palustris
E1-9c]
gi|219546269|gb|ACL16719.1| periplasmic copper-binding [Methanosphaerula palustris E1-9c]
Length = 709
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/295 (35%), Positives = 152/295 (51%), Gaps = 30/295 (10%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL- 95
+ + + G GSE G F+ P GI V +I VAD++N+R+Q + F+
Sbjct: 24 ETYQFTTQWGGNGSESGQFSAPSGITVDELGNIFVADTNNNRIQ------KFSSTGAFIN 77
Query: 96 ----------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE 145
F PRGIAV +I +AD+ N+R+Q F S G F+ K+GS G GQ
Sbjct: 78 AWGSKGIENGQFKSPRGIAVDKTGNIFIADTGNYRIQKFSSTGQFLIKWGSPGIGIGQFA 137
Query: 146 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
P I V + V V+D +RVQ F SDGT++ +G G + P I
Sbjct: 138 APEGICVDDAGNVYVTDWGYNRVQ-------KFSSDGTYITSWGR-----GYMSSPFGID 185
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFG-SEGSEEGQLKFPRGVAVDDQGYISVGDS 264
V NT V V+D+ NHR+ F +G +I ++G + G +G P GV VDD G + V D+
Sbjct: 186 VDNTGNVYVADTANHRILKFTDDGSLIDTWGVTPGPWDGHFVAPYGVTVDDAGNVFVTDT 245
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
N+RIQ F+ G F+ +G G+G+G+F A+ ++ N+ V D N+RIQ F
Sbjct: 246 YNSRIQKFSSVGTFITKWGTGGTGEGQFGLPSATAIDTSENVYVADTANNRIQKF 300
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 118/237 (49%), Gaps = 18/237 (7%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ--VCFPHFDLKTNCVFLA---FTWP 100
GS+G E G F PRGIAV +I +AD+ N+R+Q F +K + F P
Sbjct: 80 GSKGIENGQFKSPRGIAVDKTGNIFIADTGNYRIQKFSSTGQFLIKWGSPGIGIGQFAAP 139
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
GI V ++ V D +RVQ F SDGT++ +G G + P I V NT V V
Sbjct: 140 EGICVDDAGNVYVTDWGYNRVQKFSSDGTYITSWGR-----GYMSSPFGIDVDNTGNVYV 194
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFG-SMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
+D+ NHR+ F DG+ + +G + G G P+ + V + V V+D+ N
Sbjct: 195 ADTANHRI-------LKFTDDGSLIDTWGVTPGPWDGHFVAPYGVTVDDAGNVFVTDTYN 247
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
R+Q F G IT +G+ G+ EGQ P A+D + V D+ NNRIQ FT G
Sbjct: 248 SRIQKFSSVGTFITKWGTGGTGEGQFGLPSATAIDTSENVYVADTANNRIQKFTSQG 304
>gi|344280668|ref|XP_003412104.1| PREDICTED: tripartite motif-containing protein 3 [Loxodonta
africana]
Length = 744
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 696 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 691 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 711 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 741
>gi|345788474|ref|XP_003433077.1| PREDICTED: tripartite motif-containing protein 3 [Canis lupus
familiaris]
Length = 745
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 473 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 528
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 529 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 583
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 584 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 636
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 637 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 696
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 697 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 741
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 519 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 578
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 579 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 638
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 639 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 691
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 692 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 741
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 469 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 528
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 529 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 561
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 658 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 711
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 712 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 742
>gi|440896010|gb|ELR48052.1| Tripartite motif-containing protein 3, partial [Bos grunniens
mutus]
Length = 745
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 473 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 528
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 529 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 583
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 584 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 636
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 637 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 696
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 697 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 741
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 519 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 578
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 579 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 638
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 639 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 691
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 692 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 741
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 469 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 528
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 529 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 561
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 658 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 711
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 712 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 742
>gi|417412644|gb|JAA52699.1| Putative e3 ubiquitin ligase, partial [Desmodus rotundus]
Length = 772
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 500 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 555
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 556 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFTPEGKFKTKIG-----AGRLMGPKGVA 610
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 611 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 663
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 664 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 723
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 724 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 768
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 546 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFTPEGKFKTKIGAGRLMG 605
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 606 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 665
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 666 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 718
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 719 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 768
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 496 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 555
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 556 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 588
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 685 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 738
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 739 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 769
>gi|297293537|ref|XP_001086769.2| PREDICTED: tripartite motif-containing protein 2 isoform 6 [Macaca
mulatta]
Length = 970
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 133/243 (54%), Gaps = 23/243 (9%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT +G+A I++ADS+N VQ+F +DG F +FG G GQL+ P +AV +
Sbjct: 727 FTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSG 786
Query: 157 RVIVSDSNNHRVQIFDVNGR--------------------VFQSDGTFVGKFGSMGNKAG 196
+I++D +N V IF +G+ +FQ +G V +FGS GN
Sbjct: 787 DIIIADYDNKWVSIFSSDGKFKVRLTTNFIVVDNKACCVFIFQPNGKIVTRFGSRGNGDR 846
Query: 197 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ 256
Q PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD
Sbjct: 847 QFAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSN 906
Query: 257 GYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
G I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH
Sbjct: 907 GNIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCF 963
Query: 317 QVF 319
+V+
Sbjct: 964 KVY 966
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 132/282 (46%), Gaps = 50/282 (17%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 695 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 754
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTF------- 130
K+ P G+AV P I++AD N V +F SDG F
Sbjct: 755 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKVRLTTN 814
Query: 131 --------------------VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
V +FGS GN Q PH+ AV++ N +I++D +NH V
Sbjct: 815 FIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSV-- 872
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
+VF +G F+ KFGS G GQ P +AV + +IV+D N R+Q+FD +G
Sbjct: 873 -----KVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGS 927
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
++ + L P+G+A+ G++ V DSGN+ +++
Sbjct: 928 FLSYINTSADP---LYGPQGLALTSDGHVVVADSGNHCFKVY 966
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 109/217 (50%), Gaps = 34/217 (15%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+ + G+ G G+ + +A S + +++++DSNN VQIF +DG F +FG
Sbjct: 713 LIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIFS-------NDGQFKSRFG 765
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV---------------------- 227
G GQL+ P +AV + +I++D +N V IF
Sbjct: 766 IRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKVRLTTNFIVVDNKACCV 825
Query: 228 -----NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
NG+++T FGS G+ + Q P AV+ I + D N+ +++F +G+F+ F
Sbjct: 826 FIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKF 885
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G G+G+F GVAV SNGNI+V D N RIQVF
Sbjct: 886 GSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVF 922
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 877 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 930
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 931 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 967
>gi|149719405|ref|XP_001504641.1| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Equus
caballus]
Length = 744
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 696 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 691 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 711 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 741
>gi|73988285|ref|XP_534038.2| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Canis
lupus familiaris]
Length = 744
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 696 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 691 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 711 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 741
>gi|388454687|ref|NP_001253130.1| tripartite motif-containing protein 3 [Macaca mulatta]
gi|402894369|ref|XP_003910335.1| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Papio
anubis]
gi|402894371|ref|XP_003910336.1| PREDICTED: tripartite motif-containing protein 3 isoform 2 [Papio
anubis]
gi|402894373|ref|XP_003910337.1| PREDICTED: tripartite motif-containing protein 3 isoform 3 [Papio
anubis]
gi|355566763|gb|EHH23142.1| RING finger protein 22 [Macaca mulatta]
gi|355752378|gb|EHH56498.1| RING finger protein 22 [Macaca fascicularis]
gi|380808868|gb|AFE76309.1| tripartite motif-containing protein 3 [Macaca mulatta]
gi|383415231|gb|AFH30829.1| tripartite motif-containing protein 3 [Macaca mulatta]
Length = 744
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 696 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 691 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 711 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 741
>gi|351703801|gb|EHB06720.1| Tripartite motif-containing protein 3 [Heterocephalus glaber]
Length = 744
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 696 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 691 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 711 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 741
>gi|32454737|ref|NP_150594.2| tripartite motif-containing protein 3 isoform 1 [Homo sapiens]
gi|32454739|ref|NP_006449.2| tripartite motif-containing protein 3 isoform 1 [Homo sapiens]
gi|351721563|ref|NP_001234935.1| tripartite motif-containing protein 3 isoform 1 [Homo sapiens]
gi|332835738|ref|XP_001164502.2| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Pan
troglodytes]
gi|397496607|ref|XP_003819123.1| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Pan
paniscus]
gi|397496609|ref|XP_003819124.1| PREDICTED: tripartite motif-containing protein 3 isoform 2 [Pan
paniscus]
gi|397496611|ref|XP_003819125.1| PREDICTED: tripartite motif-containing protein 3 isoform 3 [Pan
paniscus]
gi|397496613|ref|XP_003819126.1| PREDICTED: tripartite motif-containing protein 3 isoform 4 [Pan
paniscus]
gi|215273906|sp|O75382.2|TRIM3_HUMAN RecName: Full=Tripartite motif-containing protein 3; AltName:
Full=Brain-expressed RING finger protein; AltName:
Full=RING finger protein 22; AltName: Full=RING finger
protein 97
gi|66911192|gb|AAH96827.1| Tripartite motif-containing 3 [Homo sapiens]
gi|119589115|gb|EAW68709.1| tripartite motif-containing 3, isoform CRA_a [Homo sapiens]
gi|158256228|dbj|BAF84085.1| unnamed protein product [Homo sapiens]
gi|168278076|dbj|BAG11016.1| tripartite motif-containing protein 3 [synthetic construct]
gi|410212246|gb|JAA03342.1| tripartite motif-containing 3 [Pan troglodytes]
gi|410212248|gb|JAA03343.1| tripartite motif-containing 3 [Pan troglodytes]
gi|410251376|gb|JAA13655.1| tripartite motif-containing 3 [Pan troglodytes]
gi|410296534|gb|JAA26867.1| tripartite motif-containing 3 [Pan troglodytes]
gi|410339445|gb|JAA38669.1| tripartite motif-containing 3 [Pan troglodytes]
Length = 744
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 696 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 691 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 711 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 741
>gi|296217391|ref|XP_002754989.1| PREDICTED: tripartite motif-containing protein 3 isoform 2
[Callithrix jacchus]
gi|296217393|ref|XP_002754990.1| PREDICTED: tripartite motif-containing protein 3 isoform 3
[Callithrix jacchus]
Length = 744
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 696 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 691 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 711 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 741
>gi|119589123|gb|EAW68717.1| tripartite motif-containing 3, isoform CRA_g [Homo sapiens]
Length = 668
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 142/284 (50%), Gaps = 20/284 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 396 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 455
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 456 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 510
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 511 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 563
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 564 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 623
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G +G+A+ S+G+++V D NH + +
Sbjct: 624 GSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 664
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 442 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 501
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 502 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 561
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 562 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 614
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 615 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 664
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 392 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 451
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 452 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 484
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 581 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 634
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 635 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 665
>gi|155372039|ref|NP_001094627.1| tripartite motif-containing protein 3 [Bos taurus]
gi|154425886|gb|AAI51316.1| TRIM3 protein [Bos taurus]
gi|296480026|tpg|DAA22141.1| TPA: tripartite motif-containing 3 [Bos taurus]
Length = 744
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 696 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 691 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 711 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 741
>gi|119589117|gb|EAW68711.1| tripartite motif-containing 3, isoform CRA_c [Homo sapiens]
Length = 733
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 461 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 516
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 517 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 571
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 572 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 624
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 625 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 684
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 685 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 729
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 507 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 566
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 567 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 626
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 627 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 679
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 680 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 729
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 457 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 516
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 517 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 549
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 646 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 699
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 700 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 730
>gi|403254097|ref|XP_003919815.1| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403254099|ref|XP_003919816.1| PREDICTED: tripartite motif-containing protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
gi|403254101|ref|XP_003919817.1| PREDICTED: tripartite motif-containing protein 3 isoform 3 [Saimiri
boliviensis boliviensis]
gi|403254103|ref|XP_003919818.1| PREDICTED: tripartite motif-containing protein 3 isoform 4 [Saimiri
boliviensis boliviensis]
Length = 744
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 696 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 691 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 711 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 741
>gi|395815117|ref|XP_003781082.1| PREDICTED: tripartite motif-containing protein 3 isoform 1
[Otolemur garnettii]
gi|395815119|ref|XP_003781083.1| PREDICTED: tripartite motif-containing protein 3 isoform 2
[Otolemur garnettii]
Length = 744
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 696 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 691 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 711 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 741
>gi|444524489|gb|ELV13855.1| Tripartite motif-containing protein 3 [Tupaia chinensis]
Length = 744
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 696 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 691 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 711 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 741
>gi|410973073|ref|XP_003992980.1| PREDICTED: tripartite motif-containing protein 3 isoform 2 [Felis
catus]
Length = 745
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 473 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 528
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 529 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 583
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 584 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 636
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 637 IVVTDFHNHSVKVYTADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 696
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 697 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 741
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 519 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 578
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 579 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 638
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 639 VTDFHNHSV-------KVYTADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 691
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 692 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 741
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 469 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 528
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 529 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 561
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 658 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 711
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 712 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 742
>gi|348558986|ref|XP_003465297.1| PREDICTED: tripartite motif-containing protein 3-like [Cavia
porcellus]
Length = 744
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 696 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 691 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 711 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 741
>gi|301779217|ref|XP_002925020.1| PREDICTED: tripartite motif-containing protein 3-like [Ailuropoda
melanoleuca]
gi|281338585|gb|EFB14169.1| hypothetical protein PANDA_014455 [Ailuropoda melanoleuca]
Length = 744
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 696 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 691 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 711 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 741
>gi|350588131|ref|XP_003482568.1| PREDICTED: tripartite motif-containing protein 3 [Sus scrofa]
Length = 733
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 142/284 (50%), Gaps = 20/284 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 461 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 520
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 521 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 575
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 576 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 628
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 629 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 688
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G +G+A+ S+G+++V D NH + +
Sbjct: 689 GSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 729
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 507 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 566
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 567 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 626
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 627 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 679
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 680 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 729
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 457 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 516
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 517 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 549
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 646 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 699
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 700 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 730
>gi|291384493|ref|XP_002708807.1| PREDICTED: tripartite motif-containing 3 [Oryctolagus cuniculus]
Length = 743
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 471 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 526
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 527 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 581
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 582 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 634
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 635 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 694
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 695 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 739
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 517 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 576
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 577 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 636
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 637 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 689
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 690 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 739
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 467 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 526
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 527 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 559
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 656 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 709
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 710 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 740
>gi|410973071|ref|XP_003992979.1| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Felis
catus]
Length = 744
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 IVVTDFHNHSVKVYTADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 696 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYTADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 691 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 711 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 741
>gi|12407375|gb|AAG53476.1|AF220022_1 tripartite motif protein TRIM3 isoform gamma [Homo sapiens]
Length = 665
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 141/284 (49%), Gaps = 20/284 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 393 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 452
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 453 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 507
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AVSN N V+V+
Sbjct: 508 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVSNKNEVVVT 560
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH +++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 561 DFHNHSEKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 620
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G +G+A+ S+G+++V D NH + +
Sbjct: 621 GSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 661
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 439 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 498
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AVSN N V+
Sbjct: 499 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVSNKNEVV 558
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH + +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 559 VTDFHNH-------SEKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 611
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 612 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 661
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 389 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 448
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 449 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 481
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 578 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 631
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 632 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 662
>gi|12407373|gb|AAG53475.1|AF220021_1 tripartite motif protein TRIM3 isoform beta [Homo sapiens]
Length = 733
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 143/288 (49%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 461 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 516
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 517 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 571
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AVSN N
Sbjct: 572 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVSNKNE 624
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
V+V+D +NH +++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 625 VVVTDFHNHSEKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 684
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 685 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 729
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 507 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 566
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AVSN N V+
Sbjct: 567 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVSNKNEVV 626
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH + +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 627 VTDFHNH-------SEKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 679
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 680 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 729
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 457 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 516
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 517 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 549
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 646 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 699
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 700 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 730
>gi|47216281|emb|CAF96577.1| unnamed protein product [Tetraodon nigroviridis]
Length = 743
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 158/302 (52%), Gaps = 29/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y RR L F+IG++G G FT +G+A +++ADS+N VQV
Sbjct: 454 PASMYSIGRRKENPIEDDLIFRIGTKGRNKGEFTNLQGVAAS-QGKVLIADSNNQCVQVF 512
Query: 83 FPHFDLKTNCVFLAFT-----WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
+ T P G+AV P+ I++AD N V +F S+G F K GS
Sbjct: 513 SNDGQFRMRFGIRGRTPGQLQRPTGVAVHPNGDIIIADYDNKWVSIFSSEGKFKNKIGS- 571
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V VIV D+ + V IF +NG++ V +FG+ GN Q
Sbjct: 572 ----GKLMGPKGVSVDRNGHVIVVDNKSCCVFIFQLNGKL-------VTRFGNRGNGDRQ 620
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ +G + FGS G GQ P GVAVD G
Sbjct: 621 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNTDGEFLLKFGSNGEGNGQFNAPTGVAVDVNG 680
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 681 NIIVADWGNSRIQVFDSSGSFLLYVNT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 737
Query: 318 VF 319
++
Sbjct: 738 IY 739
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWP 100
K GS G G F P G+AV + +I+VAD N R+QV F L N P
Sbjct: 656 LKFGSNGEGNGQFNAPTGVAVDVNGNIIVADWGNSRIQVFDSSGSFLLYVNTSADPLYGP 715
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
+G+A+ D +VVADS NH ++++
Sbjct: 716 QGLALTSDGHVVVADSGNHCFKIYR 740
>gi|12407371|gb|AAG53474.1|AF220020_1 tripartite motif protein TRIM3 isoform alpha [Homo sapiens]
gi|3273699|gb|AAC24809.1| brain expressed ring finger protein [Homo sapiens]
Length = 744
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 143/288 (49%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AVSN N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVSNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
V+V+D +NH +++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 VVVTDFHNHSEKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 696 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AVSN N V+
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVSNKNEVV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH + +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNH-------SEKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 691 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 711 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 741
>gi|354501663|ref|XP_003512909.1| PREDICTED: tripartite motif-containing protein 3 [Cricetulus
griseus]
gi|344257591|gb|EGW13695.1| Tripartite motif-containing protein 3 [Cricetulus griseus]
Length = 744
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 143/288 (49%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKVG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 IVVTDFQNHTVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 696 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 122/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKVGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFQNHTV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 691 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 711 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 741
>gi|351707591|gb|EHB10510.1| Tripartite motif-containing protein 2 [Heterocephalus glaber]
Length = 797
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 145/279 (51%), Gaps = 20/279 (7%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWP 100
G++G G FT +G+A I++ADS+N VQ+ K+ P
Sbjct: 530 GTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRP 589
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+AV P I++AD N V +F SDG F K GS G+L P ++V +IV
Sbjct: 590 TGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS-----GKLMGPKGVSVDRNGHIIV 644
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
D N +F +FQ +G V KFGS GN Q PH+ AV++ N +IV+D +NH
Sbjct: 645 VD--NKACCVF-----IFQPNGKIVTKFGSRGNGDRQFAGPHFAAVNSNNEIIVTDFHNH 697
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
V++F+ G + FGS G GQ P GVAVD G I V D GN+RIQ+F G FL
Sbjct: 698 SVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLS 757
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
S D + G +G+A+ S+G+++V D NH +V+
Sbjct: 758 YINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFKVY 793
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 122/233 (52%), Gaps = 12/233 (5%)
Query: 42 QFK--IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
QFK G RG PG P G+AV P I++AD N V + KT
Sbjct: 571 QFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGSGKLMG 630
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G++V + I+V D+ V +FQ +G V KFGS GN Q PH+ AV++ N +I
Sbjct: 631 PKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTKFGSRGNGDRQFAGPHFAAVNSNNEII 690
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +VF +G F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 691 VTDFHNHSV-------KVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGN 743
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V DSGN+ +++
Sbjct: 744 SRIQVFDGSGSFLSYINTSADP---LYGPQGLALTSDGHVVVADSGNHCFKVY 793
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ S G++G +G+ +GVA G I + DS N +QIF+ DGQF FG G G+
Sbjct: 526 VESAGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQ 585
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ GVAV +G+I++ D +N + +F
Sbjct: 586 LQRPTGVAVHPSGDIIIADYDNKWVSIF 613
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 704 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 757
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 758 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 794
>gi|290978091|ref|XP_002671770.1| hypothetical protein NAEGRDRAFT_81452 [Naegleria gruberi]
gi|284085341|gb|EFC39026.1| hypothetical protein NAEGRDRAFT_81452 [Naegleria gruberi]
Length = 959
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 165/317 (52%), Gaps = 37/317 (11%)
Query: 27 VGTTPRSQYLQKRRLQFKI--------GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHR 78
V ++P + + + ++ KI G +G+E G F+ P IA+ P ++I++ D+ N+R
Sbjct: 655 VHSSPNTPVIPTQEIKCKIEGKFVLGFGGKGTEDGQFSSPTDIAIDPSDNIIICDNENNR 714
Query: 79 VQVCFPHFDLKTNCVFLAFTWPR--GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS 136
VQ+ FD K F+ P+ G+ +++ S +H V F GT VGKFGS
Sbjct: 715 VQI----FD-KQGKFLRKFSVPKPYGVTFDAKEGVILVTSDDHCVYAFDKSGTEVGKFGS 769
Query: 137 MGNKAGQLEHPHYIAVSNTN-----RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM 191
G + G +P I VS T ++IV D +NHR+Q+ F G+F+ FG+
Sbjct: 770 KGAEYGHFSYPTGIIVSETKSQIPGKIIVCDHHNHRIQM-------FDKYGSFLKSFGTN 822
Query: 192 GN----KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
G + G P+ + + ++++D N RVQ+F ++G + F + E +
Sbjct: 823 GTNPEMEGGYFYGPNSLDIDIDGNLVITDRYNCRVQVFTLDGTFVRKFSVKKQENSECD- 881
Query: 248 PRGVAVDDQG----YISVGDSGNNRIQIFT-PDGQFLRAFGCWGSGDGEFKGLEGVAVMS 302
P G+ + + ++ D NNRIQI+ +G ++ FGC+GS DG+F G GV++ S
Sbjct: 882 PTGICCLKKNIGLNFAAICDYANNRIQIWNLREGVIIKQFGCYGSEDGQFDGPNGVSITS 941
Query: 303 NGNILVCDRENHRIQVF 319
G+++V D NHR+Q+F
Sbjct: 942 EGHLVVVDYHNHRVQIF 958
>gi|383852866|ref|XP_003701946.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
71-like [Megachile rotundata]
Length = 722
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 126/223 (56%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GIA + +V+AD SN+R+QV+ DGTF+ KFG+ G GQ + P +AV R++
Sbjct: 460 PWGIACDREGHVVIADRSNNRIQVYHQDGTFIRKFGTHGTGPGQFDRPAGVAVDARRRIV 519
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+Q+ + +G F+ FG G + GQ +P +AV++ +++VSD+ N
Sbjct: 520 VADKDNHRIQVLTM-------EGLFLLSFGEKGCRCGQFNYPWDVAVNSDCQIVVSDTRN 572
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKF--PRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
HRVQ+F G + +G E + F PRGVA + +G + D N+R+ I D
Sbjct: 573 HRVQLFSPEGIFLRKYGYESAPNMWKHFDSPRGVAFNPEGNVVTTDFNNHRVVIIEADFM 632
Query: 278 FLRAFGC-WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ C +G +F +G+ + GNI++ D NHRIQ+F
Sbjct: 633 HAKILECECAAGAKQFLRPQGLVIDDEGNIIIADSRNHRIQIF 675
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 150/291 (51%), Gaps = 31/291 (10%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--------- 95
IG+ G P GIA + +V+AD SN+R+QV + F+
Sbjct: 447 IGNNGDAEDNLCRPWGIACDREGHVVIADRSNNRIQV------YHQDGTFIRKFGTHGTG 500
Query: 96 --AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F P G+AV IVVAD NHR+QV +G F+ FG G + GQ +P +AV+
Sbjct: 501 PGQFDRPAGVAVDARRRIVVADKDNHRIQVLTMEGLFLLSFGEKGCRCGQFNYPWDVAVN 560
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVSNTNR 211
+ +++VSD+ NHRVQ+ F +G F+ K+G S N + P +A +
Sbjct: 561 SDCQIVVSDTRNHRVQL-------FSPEGIFLRKYGYESAPNMWKHFDSPRGVAFNPEGN 613
Query: 212 VIVSDSNNHRVQIFD---VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
V+ +D NNHRV I + ++ +++ + G++ Q P+G+ +DD+G I + DS N+R
Sbjct: 614 VVTTDFNNHRVVIIEADFMHAKILECECAAGAK--QFLRPQGLVIDDEGNIIIADSRNHR 671
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
IQIF G FGC+G + E G+A+ +G+I V D N+R+ +
Sbjct: 672 IQIFDSAGVLKWRFGCYGKAEDEMDRPSGIALCPDGSIAVVDFGNNRVLII 722
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 123/239 (51%), Gaps = 19/239 (7%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH--FDL---KTNCVFLAFT 98
K G+ G+ PG F P G+AV IVVAD NHR+QV F L + C F
Sbjct: 493 KFGTHGTGPGQFDRPAGVAVDARRRIVVADKDNHRIQVLTMEGLFLLSFGEKGCRCGQFN 552
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVSNTN 156
+P +AV D IVV+D+ NHRVQ+F +G F+ K+G S N + P +A +
Sbjct: 553 YPWDVAVNSDCQIVVSDTRNHRVQLFSPEGIFLRKYGYESAPNMWKHFDSPRGVAFNPEG 612
Query: 157 RVIVSDSNNHRVQIFD---VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
V+ +D NNHRV I + ++ ++ + + A Q P + + + +I
Sbjct: 613 NVVTTDFNNHRVVIIEADFMHAKILECE---------CAAGAKQFLRPQGLVIDDEGNII 663
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
++DS NHR+QIFD G + FG G E ++ P G+A+ G I+V D GNNR+ I
Sbjct: 664 IADSRNHRIQIFDSAGVLKWRFGCYGKAEDEMDRPSGIALCPDGSIAVVDFGNNRVLII 722
>gi|54020865|ref|NP_001005680.1| tripartite motif containing 2 [Xenopus (Silurana) tropicalis]
gi|49522062|gb|AAH75100.1| tripartite motif-containing 2 [Xenopus (Silurana) tropicalis]
Length = 760
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 150/283 (53%), Gaps = 24/283 (8%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWP 100
G++G G FT +G+A + I++ADS+N VQ+ K+ P
Sbjct: 489 GTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRP 548
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+AV P I++AD N V +F +DG F K GS G+L P ++V +IV
Sbjct: 549 TGVAVHPSGDIIIADYDNKWVSIFSADGKFKTKIGS-----GKLMGPKGVSVDRNGHIIV 603
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK----AGQLEHPHYIAVSNTNRVIVSD 216
D N +F +FQ +G V +FGS GN AG L+ PH+ AV++ N +IV+D
Sbjct: 604 VD--NKACCVF-----IFQPNGKIVTRFGSRGNGDKQFAGTLDGPHFAAVNSNNEIIVTD 656
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+NH V++F+ +G I FGS G GQ P GVAVD G I V D GN+RIQ+F G
Sbjct: 657 FHNHSVKVFNQDGEFILKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSG 716
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL S D + G +G+++ S+G+++V D NH +V+
Sbjct: 717 SFLSYINT--SADPLY-GPQGLSLTSDGHVVVADSGNHCFKVY 756
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 125/237 (52%), Gaps = 16/237 (6%)
Query: 42 QFK--IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
QFK G RG PG P G+AV P I++AD N V + KT
Sbjct: 530 QFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSADGKFKTKIGSGKLMG 589
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNK----AGQLEHPHYIAVSNT 155
P+G++V + I+V D+ V +FQ +G V +FGS GN AG L+ PH+ AV++
Sbjct: 590 PKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDKQFAGTLDGPHFAAVNSN 649
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
N +IV+D +NH V +VF DG F+ KFGS G GQ P +AV + +IV+
Sbjct: 650 NEIIVTDFHNHSV-------KVFNQDGEFILKFGSNGEGNGQFNAPTGVAVDSNGNIIVA 702
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
D N R+Q+FD +G ++ + L P+G+++ G++ V DSGN+ +++
Sbjct: 703 DWGNSRIQVFDGSGSFLSYINTSADP---LYGPQGLSLTSDGHVVVADSGNHCFKVY 756
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
K GS G G F P G+AV + +I+VAD N R+QV FD + FL++
Sbjct: 673 LKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLSYINTSA 726
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+++ D +VVADS NH +V++
Sbjct: 727 DPLYGPQGLSLTSDGHVVVADSGNHCFKVYR 757
>gi|307197040|gb|EFN78412.1| Tripartite motif-containing protein 71 [Harpegnathos saltator]
Length = 849
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 147/282 (52%), Gaps = 32/282 (11%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----------FTWPRG 102
C W GI I+VAD SN+R+Q+ + + F+ F P G
Sbjct: 574 CRPW--GITCDNRGHIIVADRSNNRIQI------YREDGTFVMRFGSQGTGQGQFDRPAG 625
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
IAV I++AD NHR+Q+ Q DGTFV FG G++ GQ +P +AV++ R+ VSD
Sbjct: 626 IAVDSRQRIIIADKDNHRIQILQMDGTFVNSFGQKGHENGQFNYPWDVAVNSECRIAVSD 685
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+ NHRVQ+ F DG F+ K+G + N + P + + +IVSD NNH
Sbjct: 686 TRNHRVQL-------FSPDGVFLCKYGYENTPNMWKYFDSPRGVCFTPDGSLIVSDFNNH 738
Query: 221 RVQIFD---VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
+ D + R +T + S + L+ P+GV +DD+G I + DS N+RIQ+F +G+
Sbjct: 739 TLVSIDSRFSSARTLTCEAVDNSNKPFLR-PQGVVIDDKGNIIIADSRNHRIQVFNSNGR 797
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL +G G+G E +A++ +G I + D N+R+ V
Sbjct: 798 FLWKYGVHGTGMKEMDRPADIALLPDGKIAIVDFGNNRVLVL 839
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 108/190 (56%), Gaps = 9/190 (4%)
Query: 129 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKF 188
+ V G + + L P I N +IV+D +N+R+QI+ + DGTFV +F
Sbjct: 558 SVVQMIGDNSDVSDNLCRPWGITCDNRGHIIVADRSNNRIQIY-------REDGTFVMRF 610
Query: 189 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFP 248
GS G GQ + P IAV + R+I++D +NHR+QI ++G + SFG +G E GQ +P
Sbjct: 611 GSQGTGQGQFDRPAGIAVDSRQRIIIADKDNHRIQILQMDGTFVNSFGQKGHENGQFNYP 670
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD--GEFKGLEGVAVMSNGNI 306
VAV+ + I+V D+ N+R+Q+F+PDG FL +G + + F GV +G++
Sbjct: 671 WDVAVNSECRIAVSDTRNHRVQLFSPDGVFLCKYGYENTPNMWKYFDSPRGVCFTPDGSL 730
Query: 307 LVCDRENHRI 316
+V D NH +
Sbjct: 731 IVSDFNNHTL 740
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 122/243 (50%), Gaps = 24/243 (9%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------- 95
+ GS+G+ G F P GIAV I++AD NHR+Q+ L+ + F+
Sbjct: 608 MRFGSQGTGQGQFDRPAGIAVDSRQRIIIADKDNHRIQI------LQMDGTFVNSFGQKG 661
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG--SMGNKAGQLEHPHY 149
F +P +AV + I V+D+ NHRVQ+F DG F+ K+G + N + P
Sbjct: 662 HENGQFNYPWDVAVNSECRIAVSDTRNHRVQLFSPDGVFLCKYGYENTPNMWKYFDSPRG 721
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
+ + +IVSD NNH + ++ R F S T + NK P + + +
Sbjct: 722 VCFTPDGSLIVSDFNNH--TLVSIDSR-FSSARTLTCEAVDNSNKP--FLRPQGVVIDDK 776
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
+I++DS NHR+Q+F+ NGR + +G G+ ++ P +A+ G I++ D GNNR+
Sbjct: 777 GNIIIADSRNHRIQVFNSNGRFLWKYGVHGTGMKEMDRPADIALLPDGKIAIVDFGNNRV 836
Query: 270 QIF 272
+
Sbjct: 837 LVL 839
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 76/137 (55%)
Query: 183 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
+ V G + + L P I N +IV+D +N+R+QI+ +G + FGS+G+ +
Sbjct: 558 SVVQMIGDNSDVSDNLCRPWGITCDNRGHIIVADRSNNRIQIYREDGTFVMRFGSQGTGQ 617
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMS 302
GQ P G+AVD + I + D N+RIQI DG F+ +FG G +G+F VAV S
Sbjct: 618 GQFDRPAGIAVDSRQRIIIADKDNHRIQILQMDGTFVNSFGQKGHENGQFNYPWDVAVNS 677
Query: 303 NGNILVCDRENHRIQVF 319
I V D NHR+Q+F
Sbjct: 678 ECRIAVSDTRNHRVQLF 694
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 100/203 (49%), Gaps = 23/203 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH--FDLK-----TNCVFLAFT 98
G +G E G F +P +AV + I V+D+ NHRVQ+ P F K T ++ F
Sbjct: 658 GQKGHENGQFNYPWDVAVNSECRIAVSDTRNHRVQLFSPDGVFLCKYGYENTPNMWKYFD 717
Query: 99 WPRGIAVGPDNSIVVADSSNHRV----QVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
PRG+ PD S++V+D +NH + F S T + NK P + + +
Sbjct: 718 SPRGVCFTPDGSLIVSDFNNHTLVSIDSRFSSARTLTCEAVDNSNKP--FLRPQGVVIDD 775
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+I++DS NHR+Q VF S+G F+ K+G G +++ P IA+ ++ +
Sbjct: 776 KGNIIIADSRNHRIQ-------VFNSNGRFLWKYGVHGTGMKEMDRPADIALLPDGKIAI 828
Query: 215 SDSNNHRVQIFDVNGRVITSFGS 237
D N+RV + D RVI S S
Sbjct: 829 VDFGNNRVLVLD---RVIESAES 848
>gi|410917734|ref|XP_003972341.1| PREDICTED: tripartite motif-containing protein 2-like isoform 1
[Takifugu rubripes]
Length = 743
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 157/302 (51%), Gaps = 29/302 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y RR L F+IG++G G FT +G+ +++ADS+N VQV
Sbjct: 454 PASMYSIGRRKENPIEDDLIFRIGTKGRNKGEFTNLQGVTAS-QGKVLIADSNNQCVQVF 512
Query: 83 FPHFDLKTNCVFLAFT-----WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
+ T P G+AV P+ I++AD N V +F S+G F K GS
Sbjct: 513 SNDGQFRMRFGIRGRTPGQLQRPTGVAVHPNGDIIIADYDNKWVSIFSSEGKFKNKIGS- 571
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D+ + V IF +NG++ V KFG+ GN Q
Sbjct: 572 ----GKLMGPKGVSVDRNGHIIVVDNKSCCVFIFQLNGKL-------VTKFGNRGNGDRQ 620
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ A+++ N +IV+D +NH V++F+ +G + FGS G GQ P GVAVD G
Sbjct: 621 FAGPHFAAINSNNEIIVTDFHNHSVKVFNTDGEFLLKFGSNGEGNGQFNAPTGVAVDVNG 680
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D NH +
Sbjct: 681 NIIVADWGNSRIQVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFK 737
Query: 318 VF 319
++
Sbjct: 738 IY 739
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
K GS G G F P G+AV + +I+VAD N R+QV FD + FL++
Sbjct: 656 LKFGSNGEGNGQFNAPTGVAVDVNGNIIVADWGNSRIQV----FDGSGS--FLSYINTSA 709
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH ++++
Sbjct: 710 DPLYGPQGLALTSDGHVVVADSGNHCFKIYR 740
>gi|380027466|ref|XP_003697444.1| PREDICTED: tripartite motif-containing protein 71-like [Apis
florea]
Length = 721
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 150/288 (52%), Gaps = 31/288 (10%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--------- 95
IG+ G P GIA + I+VAD SN+R+Q+ F + FL
Sbjct: 446 IGNDGDAQDNLCRPWGIACDREGHIIVADRSNNRIQIYF------QDGSFLRRFGTHGTA 499
Query: 96 --AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F P G+AV IVVAD NHR+QV +G F+ FG G +AGQ +P +A +
Sbjct: 500 PGQFDRPAGVAVDARRRIVVADKDNHRIQVLTMEGLFLLCFGEKGCRAGQFNYPWDVAAN 559
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVSNTNR 211
+ +++VSD+ NHRVQ+ F +G F+ K+G S N + P +A +
Sbjct: 560 SECQIVVSDTRNHRVQL-------FSPEGVFLRKYGYESAPNMWKHFDSPRGVAFNPDGN 612
Query: 212 VIVSDSNNHRVQIFD---VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
V+ +D NNHR+ I D V+ RV+ S G+ + L+ P+G+ +DD+G I V DS N+R
Sbjct: 613 VVTTDFNNHRLVIIDSDFVHARVLEC-ESPGAPKQFLR-PQGLVIDDEGNIIVADSRNHR 670
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
IQIF G FG +G D E G+A+ +G I++ D N+R+
Sbjct: 671 IQIFDSTGTLQWRFGNYGKDDNEMDRPSGIALCPDGRIVIVDFGNNRV 718
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 124/223 (55%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GIA + I+VAD SN+R+Q++ DG+F+ +FG+ G GQ + P +AV R++
Sbjct: 459 PWGIACDREGHIIVADRSNNRIQIYFQDGSFLRRFGTHGTAPGQFDRPAGVAVDARRRIV 518
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+Q+ + +G F+ FG G +AGQ +P +A ++ +++VSD+ N
Sbjct: 519 VADKDNHRIQVLTM-------EGLFLLCFGEKGCRAGQFNYPWDVAANSECQIVVSDTRN 571
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKF--PRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
HRVQ+F G + +G E + F PRGVA + G + D N+R+ I D
Sbjct: 572 HRVQLFSPEGVFLRKYGYESAPNMWKHFDSPRGVAFNPDGNVVTTDFNNHRLVIIDSDFV 631
Query: 278 FLRAFGCWGSG-DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
R C G +F +G+ + GNI+V D NHRIQ+F
Sbjct: 632 HARVLECESPGAPKQFLRPQGLVIDDEGNIIVADSRNHRIQIF 674
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 125/252 (49%), Gaps = 27/252 (10%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV---------CFPH 85
Y Q + G+ G+ PG F P G+AV IVVAD NHR+QV CF
Sbjct: 483 YFQDGSFLRRFGTHGTAPGQFDRPAGVAVDARRRIVVADKDNHRIQVLTMEGLFLLCFG- 541
Query: 86 FDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG--SMGNKAGQ 143
+ C F +P +A + IVV+D+ NHRVQ+F +G F+ K+G S N
Sbjct: 542 ---EKGCRAGQFNYPWDVAANSECQIVVSDTRNHRVQLFSPEGVFLRKYGYESAPNMWKH 598
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFD---VNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
+ P +A + V+ +D NNHR+ I D V+ RV + + K Q
Sbjct: 599 FDSPRGVAFNPDGNVVTTDFNNHRLVIIDSDFVHARVLECESPGAPK---------QFLR 649
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
P + + + +IV+DS NHR+QIFD G + FG+ G ++ ++ P G+A+ G I
Sbjct: 650 PQGLVIDDEGNIIVADSRNHRIQIFDSTGTLQWRFGNYGKDDNEMDRPSGIALCPDGRIV 709
Query: 261 VGDSGNNRIQIF 272
+ D GNNR+ +
Sbjct: 710 IVDFGNNRVLLI 721
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 120/224 (53%), Gaps = 17/224 (7%)
Query: 100 PRGIAVGPDNS--IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
PRG + P NS +VV N QS T + G+ G+ L P IA
Sbjct: 416 PRGRPI-PSNSYPVVVRMDRNS-----QSSVTPLRIIGNDGDAQDNLCRPWGIACDREGH 469
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
+IV+D +N+R+QI+ FQ DG+F+ +FG+ G GQ + P +AV R++V+D
Sbjct: 470 IIVADRSNNRIQIY------FQ-DGSFLRRFGTHGTAPGQFDRPAGVAVDARRRIVVADK 522
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
+NHR+Q+ + G + FG +G GQ +P VA + + I V D+ N+R+Q+F+P+G
Sbjct: 523 DNHRIQVLTMEGLFLLCFGEKGCRAGQFNYPWDVAANSECQIVVSDTRNHRVQLFSPEGV 582
Query: 278 FLRAFGCWGSGD--GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FLR +G + + F GVA +GN++ D NHR+ +
Sbjct: 583 FLRKYGYESAPNMWKHFDSPRGVAFNPDGNVVTTDFNNHRLVII 626
>gi|115707256|ref|XP_787393.2| PREDICTED: tripartite motif-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 695
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 148/302 (49%), Gaps = 32/302 (10%)
Query: 30 TPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNS-IVVADSSNHRVQVCFPHFDL 88
T + L+K ++ F + E G F WP G+A D + D N R+QV ++
Sbjct: 408 TAKESVLKKPQILFHLKDETDEAGEFDWPSGVASTADGEYTAIVDRDNDRIQV----YNR 463
Query: 89 K--TNCVF-------LAFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K C F F P +A+ G D + V D NHRVQ G ++ FG
Sbjct: 464 KGRFECKFGSRGRQPCQFELPLDVAITGGDDPCVYVTDEYNHRVQKLTLYGQYILHFGD- 522
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G + P+ IA++ RV+V+D HR+ I D DG + FGS G+ Q
Sbjct: 523 ---NGLFKQPYGIALAKDGRVVVTDIGKHRITIHD-------PDGNLISSFGSRGDADNQ 572
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
P Y+ +SN NR+IVSD NH ++IFD G + +FGS GS GQ P GV D +G
Sbjct: 573 FNEPRYVTISN-NRIIVSDHCNHCIKIFDFKGTHLHTFGSCGSGNGQFIGPTGVCTDQEG 631
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D +R+Q+F+P+G F+R DG G G+A+ S+G +++ + H +
Sbjct: 632 NILVADCA-DRLQLFSPEGMFIRHL--LNESDG-LSGPLGMAMSSSGELVITNLGTHCVN 687
Query: 318 VF 319
+F
Sbjct: 688 MF 689
>gi|47227859|emb|CAG09022.1| unnamed protein product [Tetraodon nigroviridis]
Length = 767
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 158/316 (50%), Gaps = 40/316 (12%)
Query: 29 TTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL 88
TT + + + L +++G+RG + G FT +GI+ + IVVADS+N +QV
Sbjct: 463 TTKKKENPIEDELIYRVGTRGRDKGEFTNIQGISASSNGRIVVADSNNQCIQVFSNDGQF 522
Query: 89 KTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
K P G+ V + I+VAD N + +F SDG F K G AG+
Sbjct: 523 KMRFGVRGRSPGQLQRPTGVTVDMNGDIIVADYDNRWISIFSSDGKFKNKIG-----AGR 577
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG----------- 192
L P +AV +I +D N +F +FQS+G V KFG+ G
Sbjct: 578 LMGPKGVAVDKNGHIITAD--NKACCVF-----IFQSNGKLVTKFGARGTSDRHFAEKSG 630
Query: 193 ---------NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
+K+G PH++AV+N N ++V+D +NH V++++ +G + FGS G G
Sbjct: 631 ANIALEQKLSKSGPAFSPHFVAVNNKNEIVVTDFHNHSVKVYNADGEFLFKFGSHGEGNG 690
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
Q P GVAVD G I V D GN+RIQ+F G FL S D + G +G+A+ S+
Sbjct: 691 QFNAPTGVAVDTNGNIIVADWGNSRIQVFDSSGSFLSYINT--SADPLY-GPQGLALTSD 747
Query: 304 GNILVCDRENHRIQVF 319
G++ V D NH +V+
Sbjct: 748 GHVAVADSGNHCFKVY 763
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 680 FKFGSHGEGNGQFNAPTGVAVDTNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 733
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D + VADS NH +V++
Sbjct: 734 DPLYGPQGLALTSDGHVAVADSGNHCFKVYR 764
>gi|148229453|ref|NP_001088374.1| tripartite motif containing 3 [Xenopus laevis]
gi|54038768|gb|AAH84635.1| LOC495223 protein [Xenopus laevis]
Length = 740
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/287 (35%), Positives = 152/287 (52%), Gaps = 26/287 (9%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH---FDLKTNCVFLA--- 96
++GSRG + G F+ +GI+ +N IVVAD SN++ F + F L+ +
Sbjct: 466 LRVGSRGRDKGEFSNLQGISTSCNNRIVVAD-SNNQCIQVFTNDGLFKLRFGVRGRSPGQ 524
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
P G+AV + IVVAD N V +F +G F K G G+L P +AV
Sbjct: 525 LQRPTGVAVDMNGDIVVADYDNRWVSIFSPEGKFKNKIG-----VGRLMGPKGVAVDRNG 579
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG----NKAGQLEHPHYIAVSNTNRV 212
+IV D N IF +FQS+G VG+FG G + G L+ PH++AV+N N +
Sbjct: 580 HLIVVD--NKSCCIF-----IFQSNGKLVGRFGGRGPGDKQQPGALDGPHFVAVNNKNEI 632
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+V+D +NH V+++ +G + FGS G GQ P G+AVD G I V D GN+RIQ+F
Sbjct: 633 VVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGIAVDSNGNIIVADWGNSRIQVF 692
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G G +G+++ S+G+++V D NH +V+
Sbjct: 693 DSSGSFLSYINTMGD---PLYGPQGLSLTSDGHVVVADSGNHCFKVY 736
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 128/236 (54%), Gaps = 14/236 (5%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWP 100
+ + G RG PG P G+AV + IVVAD N V + P K P
Sbjct: 511 FKLRFGVRGRSPGQLQRPTGVAVDMNGDIVVADYDNRWVSIFSPEGKFKNKIGVGRLMGP 570
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG----NKAGQLEHPHYIAVSNTN 156
+G+AV + ++V D+ + + +FQS+G VG+FG G + G L+ PH++AV+N N
Sbjct: 571 KGVAVDRNGHLIVVDNKSCCIFIFQSNGKLVGRFGGRGPGDKQQPGALDGPHFVAVNNKN 630
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++V+D +NH V +V+ +DG F+ KFGS G GQ P IAV + +IV+D
Sbjct: 631 EIVVTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGIAVDSNGNIIVAD 683
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
N R+Q+FD +G ++ + G L P+G+++ G++ V DSGN+ +++
Sbjct: 684 WGNSRIQVFDSSGSFLSYINTMGDP---LYGPQGLSLTSDGHVVVADSGNHCFKVY 736
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ +I GS G ++G+ +G++ I V DS N IQ+FT DG F FG G
Sbjct: 460 IEDEMILRVGSRGRDKGEFSNLQGISTSCNNRIVVADSNNQCIQVFTNDGLFKLRFGVRG 519
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV NG+I+V D +N + +F
Sbjct: 520 RSPGQLQRPTGVAVDMNGDIVVADYDNRWVSIF 552
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P GIAV + +I+VAD N R+QV FD ++ FL++
Sbjct: 653 FKFGSHGEGNGQFNAPTGIAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTMG 706
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+++ D +VVADS NH +V++
Sbjct: 707 DPLYGPQGLSLTSDGHVVVADSGNHCFKVYR 737
>gi|425444972|ref|ZP_18825012.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9443]
gi|389735121|emb|CCI01307.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9443]
Length = 369
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 158/323 (48%), Gaps = 32/323 (9%)
Query: 8 KNINSCFLLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDN 67
K NS L+ +S IG +T +Q F G GS G P I V +
Sbjct: 21 KLANSLSLVSAATISIIGLCLSTA-TQASADATFSFSFGGLGSGNGQLACPTNIRVDNSS 79
Query: 68 SIVVADSSNHRVQVCFPHFDLKTNCVFLA-----------FTWPRGIAVGPDNSIVVADS 116
+I VAD N+R+Q + ++ +L+ F P GIA+ +I VA+
Sbjct: 80 NIYVADLCNNRIQ------EFNSSGQYLSQFGNFGTGNGQFYSPYGIALDKSENIFVAEE 133
Query: 117 SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
N R+Q F S G ++ +FG+ G L P IA+ N V + N F N +
Sbjct: 134 GNQRIQKFNSSGVYISQFGN-----GLLTSPIAIAIDNLGNSYVVNFN----LPFGDNIK 184
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
F S+G FG GQL P IA+ + + +SD +H V+ F+ +G ++ FG
Sbjct: 185 EFDSNGVLQLSFG-----IGQLADPRSIAIDSNGDIYISDGLSHLVKKFNSSGSYLSQFG 239
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
G+ +GQ P G+A+D G I VGD+ +NRIQ F G +L FG +G+G+G+F G +
Sbjct: 240 GFGNGDGQFNLPFGIAIDSIGDIYVGDASSNRIQKFNSSGVYLSQFGSFGNGNGQFSGPQ 299
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
G+ V NG I V D N+RIQVF
Sbjct: 300 GITVDKNGKIYVADYYNNRIQVF 322
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 105/240 (43%), Gaps = 58/240 (24%)
Query: 34 QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ------VCFPHF- 86
QYL + G+ G+ G F P GIA+ +I VA+ N R+Q V F
Sbjct: 99 QYLSQ------FGNFGTGNGQFYSPYGIALDKSENIFVAEEGNQRIQKFNSSGVYISQFG 152
Query: 87 --------------------------------DLKTNCVF-LAF-----TWPRGIAVGPD 108
+ +N V L+F PR IA+ +
Sbjct: 153 NGLLTSPIAIAIDNLGNSYVVNFNLPFGDNIKEFDSNGVLQLSFGIGQLADPRSIAIDSN 212
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
I ++D +H V+ F S G+++ +FG GN GQ P IA+ + + V D++++R+
Sbjct: 213 GDIYISDGLSHLVKKFNSSGSYLSQFGGFGNGDGQFNLPFGIAIDSIGDIYVGDASSNRI 272
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
Q F+ S G ++ +FGS GN GQ P I V ++ V+D N+R+Q+F N
Sbjct: 273 QKFN-------SSGVYLSQFGSFGNGNGQFSGPQGITVDKNGKIYVADYYNNRIQVFTQN 325
>gi|355726027|gb|AES08740.1| tripartite motif protein TRIM2 [Mustela putorius furo]
Length = 266
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 143/278 (51%), Gaps = 20/278 (7%)
Query: 47 SRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWPR 101
++G G FT +G+A I++ADS+N VQ+ K+ P
Sbjct: 1 TKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRPT 60
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
G+AV P I++AD N V +F SDG F K GS G+L P ++V +IV
Sbjct: 61 GVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS-----GKLMGPKGVSVDRNGHIIVV 115
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
D N +F +FQ +G V +FGS GN Q PH+ AV++ N +IV+D +NH
Sbjct: 116 D--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIVTDFHNHS 168
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
V++F+ G + FGS G GQ P GVAVD G I V D GN+RIQ+F G FL
Sbjct: 169 VKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSY 228
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
S D G +G+A+ S+G+++V D NH +V+
Sbjct: 229 INT--SAD-PLYGPQGLALTSDGHVVVADSGNHCFKVY 263
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 122/233 (52%), Gaps = 12/233 (5%)
Query: 42 QFK--IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
QFK G RG PG P G+AV P I++AD N V + KT
Sbjct: 41 QFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGSGKLMG 100
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G++V + I+V D+ V +FQ +G V +FGS GN Q PH+ AV++ N +I
Sbjct: 101 PKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEII 160
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +VF +G F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 161 VTDFHNHSV-------KVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGN 213
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V DSGN+ +++
Sbjct: 214 SRIQVFDGSGSFLSYINTSADP---LYGPQGLALTSDGHVVVADSGNHCFKVY 263
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC--FPHFDLKTNC 92
+ Q+ K GS G G F P G+AV + +I+VAD N R+QV F N
Sbjct: 172 FNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINT 231
Query: 93 VFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH +V++
Sbjct: 232 SADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 264
>gi|328777711|ref|XP_001120644.2| PREDICTED: tripartite motif-containing protein 71-like [Apis
mellifera]
Length = 720
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 151/288 (52%), Gaps = 31/288 (10%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--------- 95
IG+ G+ P GIA + I++AD SN+R+Q+ F + FL
Sbjct: 445 IGNDGNPQDNLCRPWGIACDREGHIIIADRSNNRIQIYF------QDGSFLRRFGTHGTA 498
Query: 96 --AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F P G+AV IVVAD NHR+QV +G F+ FG G +AGQ +P +A +
Sbjct: 499 PGQFDRPAGVAVDARRRIVVADKDNHRIQVLTMEGLFLLCFGEKGCRAGQFNYPWDVAAN 558
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVSNTNR 211
+ +++VSD+ NHRVQ+ F +G F+ K+G S N + P +A +
Sbjct: 559 SECQIVVSDTRNHRVQL-------FSPEGVFLRKYGYESSPNMWKHFDSPRGVAFNPDGN 611
Query: 212 VIVSDSNNHRVQIFD---VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
++ +D NNHR+ I D V+ RV+ S G+ + L+ P+G+ +DD+G I V DS N+R
Sbjct: 612 IVTTDFNNHRLVIIDSDFVHARVLEC-ESPGAPKQFLR-PQGLVIDDEGNIIVADSRNHR 669
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
IQIF G FG +G D E G+A+ +G I++ D N+R+
Sbjct: 670 IQIFDSTGTLQWRFGNYGKDDNEMDRPSGIALCPDGRIVIVDFGNNRV 717
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 124/223 (55%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GIA + I++AD SN+R+Q++ DG+F+ +FG+ G GQ + P +AV R++
Sbjct: 458 PWGIACDREGHIIIADRSNNRIQIYFQDGSFLRRFGTHGTAPGQFDRPAGVAVDARRRIV 517
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+Q+ + +G F+ FG G +AGQ +P +A ++ +++VSD+ N
Sbjct: 518 VADKDNHRIQVLTM-------EGLFLLCFGEKGCRAGQFNYPWDVAANSECQIVVSDTRN 570
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKF--PRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
HRVQ+F G + +G E S F PRGVA + G I D N+R+ I D
Sbjct: 571 HRVQLFSPEGVFLRKYGYESSPNMWKHFDSPRGVAFNPDGNIVTTDFNNHRLVIIDSDFV 630
Query: 278 FLRAFGCWGSG-DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
R C G +F +G+ + GNI+V D NHRIQ+F
Sbjct: 631 HARVLECESPGAPKQFLRPQGLVIDDEGNIIVADSRNHRIQIF 673
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 125/252 (49%), Gaps = 27/252 (10%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV---------CFPH 85
Y Q + G+ G+ PG F P G+AV IVVAD NHR+QV CF
Sbjct: 482 YFQDGSFLRRFGTHGTAPGQFDRPAGVAVDARRRIVVADKDNHRIQVLTMEGLFLLCFG- 540
Query: 86 FDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG--SMGNKAGQ 143
+ C F +P +A + IVV+D+ NHRVQ+F +G F+ K+G S N
Sbjct: 541 ---EKGCRAGQFNYPWDVAANSECQIVVSDTRNHRVQLFSPEGVFLRKYGYESSPNMWKH 597
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFD---VNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
+ P +A + ++ +D NNHR+ I D V+ RV + + K Q
Sbjct: 598 FDSPRGVAFNPDGNIVTTDFNNHRLVIIDSDFVHARVLECESPGAPK---------QFLR 648
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
P + + + +IV+DS NHR+QIFD G + FG+ G ++ ++ P G+A+ G I
Sbjct: 649 PQGLVIDDEGNIIVADSRNHRIQIFDSTGTLQWRFGNYGKDDNEMDRPSGIALCPDGRIV 708
Query: 261 VGDSGNNRIQIF 272
+ D GNNR+ +
Sbjct: 709 IVDFGNNRVLLI 720
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 120/225 (53%), Gaps = 19/225 (8%)
Query: 100 PRGIAVGPDNS---IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
PRG + P NS +V D S Q+ T + G+ GN L P IA
Sbjct: 415 PRGRPI-PSNSYPVVVRMDRSP------QTSVTPLRIIGNDGNPQDNLCRPWGIACDREG 467
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+I++D +N+R+QI+ FQ DG+F+ +FG+ G GQ + P +AV R++V+D
Sbjct: 468 HIIIADRSNNRIQIY------FQ-DGSFLRRFGTHGTAPGQFDRPAGVAVDARRRIVVAD 520
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+NHR+Q+ + G + FG +G GQ +P VA + + I V D+ N+R+Q+F+P+G
Sbjct: 521 KDNHRIQVLTMEGLFLLCFGEKGCRAGQFNYPWDVAANSECQIVVSDTRNHRVQLFSPEG 580
Query: 277 QFLRAFGCWGSGD--GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FLR +G S + F GVA +GNI+ D NHR+ +
Sbjct: 581 VFLRKYGYESSPNMWKHFDSPRGVAFNPDGNIVTTDFNNHRLVII 625
>gi|13929112|ref|NP_113974.1| tripartite motif-containing protein 3 [Rattus norvegicus]
gi|21362968|sp|O70277.1|TRIM3_RAT RecName: Full=Tripartite motif-containing protein 3; AltName:
Full=Brain-expressed RING finger protein; AltName:
Full=RING finger protein 22
gi|3170009|gb|AAC17997.1| RING finger protein [Rattus norvegicus]
Length = 744
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 142/288 (49%), Gaps = 28/288 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT ++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLHPLSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 696 FDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 691 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 710
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 711 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 741
>gi|260815416|ref|XP_002602469.1| hypothetical protein BRAFLDRAFT_86853 [Branchiostoma floridae]
gi|229287779|gb|EEN58481.1| hypothetical protein BRAFLDRAFT_86853 [Branchiostoma floridae]
Length = 482
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 148/279 (53%), Gaps = 24/279 (8%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN-CVFLAFTWPR 101
+ G +GS+ G F WP +AV D + VAD SNHRVQV FDL N C + P
Sbjct: 223 LRFGQKGSQQGQFDWPEDVAVRGDR-LYVADYSNHRVQV----FDLSGNFCHSFPSSNPL 277
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+AV D +I+V +S V+ F G V +F +G + P+ +AV RV+V+
Sbjct: 278 SVAVQTDGTILV--NSGKEVKKFSPSGELVNRF-PLGEYCAE---PYGLAVQRDGRVVVA 331
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
D + HR IF +F++DGT V + G G GQ P ++ V +IV+D+NNHR
Sbjct: 332 DHDKHR--IF-----LFEADGTLVKQVGEWGQGEGQFSWPCFVCVDKEGNIIVADTNNHR 384
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
VQ+FD + + FG EG + + +P GV+ D +G I + + G N Q+F PDG ++
Sbjct: 385 VQVFDKDLNIKHKFGQEGRQPQGMWWPMGVSADSRGNIVLANGGYNTCQVFRPDGIWVST 444
Query: 282 FGCWGSGDGE-FKGLEGVAVMSNGNILVCDRENHRIQVF 319
S DG+ GVAV +G++ V D +H ++ +
Sbjct: 445 I----STDGDKLNSSHGVAVTEDGHVFVADTGDHCVRKY 479
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVD-DQGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
V+ + FG +GS++GQ +P VAV D+ Y V D N+R+Q+F G F +F
Sbjct: 217 VSNNPVLRFGQKGSQQGQFDWPEDVAVRGDRLY--VADYSNHRVQVFDLSGNFCHSFPS- 273
Query: 286 GSGDGEFKGLEGVAVMSNGNILV 308
VAV ++G ILV
Sbjct: 274 -------SNPLSVAVQTDGTILV 289
>gi|122114540|ref|NP_001073637.1| tripartite motif-containing 3b [Danio rerio]
gi|120537370|gb|AAI29040.1| Tripartite motif-containing 3b [Danio rerio]
Length = 748
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 133/258 (51%), Gaps = 38/258 (14%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT +GI+ ++VADS+N +QVF +DG F +FG G GQL+ P +AV
Sbjct: 490 FTNLQGISASISGRVIVADSNNQCIQVFTNDGQFKARFGVRGRSPGQLQRPTGVAVDTNG 549
Query: 157 RVIVSDSNNHRVQIFDVNGR-----------------------------------VFQSD 181
VIV+D +N + IF +G+ +FQS+
Sbjct: 550 DVIVADYDNRWISIFSPDGKFKNKIGAGRLMGPKGVAVDRNGHIIAVDNKACCVFIFQSN 609
Query: 182 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSE 241
G V KFG+ G Q PH++AV+N N ++V+D +NH V+++ +G + FGS G
Sbjct: 610 GKLVTKFGARGTSDRQFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEG 669
Query: 242 EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVM 301
GQ P GVAVD G I V D GN+RIQ+F G FL S D + G +G+A+
Sbjct: 670 NGQFNAPTGVAVDVNGNIIVADWGNSRIQVFDSAGSFLSYINT--SADPLY-GPQGLALT 726
Query: 302 SNGNILVCDRENHRIQVF 319
S+G+++V D NH +V+
Sbjct: 727 SDGHVVVADSGNHCFKVY 744
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD + FL++
Sbjct: 661 FKFGSHGEGNGQFNAPTGVAVDVNGNIIVADWGNSRIQV----FDSAGS--FLSYINTSA 714
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH +V++
Sbjct: 715 DPLYGPQGLALTSDGHVVVADSGNHCFKVYR 745
>gi|119589120|gb|EAW68714.1| tripartite motif-containing 3, isoform CRA_e [Homo sapiens]
Length = 760
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 150/303 (49%), Gaps = 30/303 (9%)
Query: 26 QVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH 85
+VGT R Q Q + Q +GSRG E G FT +G++ IVVADS+N +QV
Sbjct: 475 RVGTDSRGQS-QMGQAQV-VGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV---- 528
Query: 86 FDLKTNCVFL---------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS 136
F + F P G+AV + I+VAD N V +F +G F K G
Sbjct: 529 FSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG- 587
Query: 137 MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAG 196
AG+L P +AV +IV D N +F FQ +G VG+FG G
Sbjct: 588 ----AGRLMGPKGVAVDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDR 636
Query: 197 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ 256
PH++AV+N N ++V+D +NH V+++ +G + FGS G GQ P GVAVD
Sbjct: 637 HFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSN 696
Query: 257 GYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
G I V D GN+RIQ+F G FL G +G+A+ S+G+++V D NH
Sbjct: 697 GNIIVADWGNSRIQVFDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCF 753
Query: 317 QVF 319
+ +
Sbjct: 754 KAY 756
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 673 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 726
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 727 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 757
>gi|340376131|ref|XP_003386587.1| PREDICTED: hypothetical protein LOC100637882 [Amphimedon
queenslandica]
Length = 732
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 142/289 (49%), Gaps = 36/289 (12%)
Query: 45 IGSRGSEPGCFTWPRGIAVGP-DNSIVVADSSNHRVQVCFPHFDL-----KTNCVFLAFT 98
+G GSE F PR +A+ P + +AD NHR+QV P K F
Sbjct: 9 VGENGSESLQFKAPRSMAISPITGQVYIADRDNHRIQVLNPDLTFSHSFGKIGSADGQFL 68
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV--SNTN 156
+P GIA+ + V+D HR+Q F SDG+F+ +FG+ G GQL P IA+ + T
Sbjct: 69 FPLGIAIDSQGFVYVSDFGCHRIQKFFSDGSFLAQFGTEGPGPGQLNSPFGIAIDTAATG 128
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA-------------------GQ 197
V VS+ NHR+ VF +G F+ +F S G+K G+
Sbjct: 129 LVYVSEYGNHRIS-------VFTGEGVFISRFESQGSKVDSPCGLTFDKDGFFKGSANGE 181
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD-- 255
+P IA+ + V V+D +NH +Q F +G+ + FG++GS G K P G+A+D
Sbjct: 182 FLYPCNIAIDSQELVYVTDYDNHCIQKFSPDGKFVGQFGTKGSGPGNFKEPVGIAIDTAA 241
Query: 256 QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNG 304
G + V + GNNRI +FT DG FL FG GS +F G+ NG
Sbjct: 242 TGLVYVSEQGNNRISVFTSDGVFLDRFGSKGSYRDQFDHPYGLTFDKNG 290
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 122/228 (53%), Gaps = 12/228 (5%)
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
+ F++PRG+A+ PD I+V+D NHR+Q DG G GN Q P+ IA+S
Sbjct: 514 VKFSFPRGLAITPDKFILVSD--NHRIQKISMDGYLKASVGEEGNGPLQFNTPYGIAISP 571
Query: 155 -TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
T +V V+D +NHR+Q V D TF FGS G+ GQ +P IA+ + V
Sbjct: 572 ITGQVYVADKSNHRIQ-------VLNPDLTFSHSFGSEGSANGQFSYPVGIAIDDQEFVY 624
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD--QGYISVGDSGNNRIQI 271
V+D NHR+Q F +G + FG GS GQL P G+A+D G + + NNRI +
Sbjct: 625 VTDFKNHRIQKFSSDGEFLDKFGIRGSGPGQLNRPHGIAIDTGATGLVYAVEWANNRISV 684
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FT G+F+ +FG GS +F G+ +G + VCD RI V+
Sbjct: 685 FTNKGEFVNSFGSEGSSIDQFSAPYGLTFDKDGFLYVCDYNMSRIVVY 732
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 120/226 (53%), Gaps = 17/226 (7%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-----LAFTWPRGIAVGP-D 108
F++PRG+A+ PD I+V+D NHR+Q LK + L F P GIA+ P
Sbjct: 516 FSFPRGLAITPDKFILVSD--NHRIQKISMDGYLKASVGEEGNGPLQFNTPYGIAISPIT 573
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
+ VAD SNHR+QV D TF FGS G+ GQ +P IA+ + V V+D NHR+
Sbjct: 574 GQVYVADKSNHRIQVLNPDLTFSHSFGSEGSANGQFSYPVGIAIDDQEFVYVTDFKNHRI 633
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN--TNRVIVSDSNNHRVQIFD 226
Q F SDG F+ KFG G+ GQL PH IA+ T V + N+R+ +F
Sbjct: 634 Q-------KFSSDGEFLDKFGIRGSGPGQLNRPHGIAIDTGATGLVYAVEWANNRISVFT 686
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
G + SFGSEGS Q P G+ D G++ V D +RI ++
Sbjct: 687 NKGEFVNSFGSEGSSIDQFSAPYGLTFDKDGFLYVCDYNMSRIVVY 732
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 129/249 (51%), Gaps = 31/249 (12%)
Query: 95 LAFTWPRGIAVGP-DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
L F PR +A+ P + +AD NHR+QV D TF FG +G+ GQ P IA+
Sbjct: 17 LQFKAPRSMAISPITGQVYIADRDNHRIQVLNPDLTFSHSFGKIGSADGQFLFPLGIAID 76
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV--SNTNR 211
+ V VSD HR+Q F SDG+F+ +FG+ G GQL P IA+ + T
Sbjct: 77 SQGFVYVSDFGCHRIQ-------KFFSDGSFLAQFGTEGPGPGQLNSPFGIAIDTAATGL 129
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSE-------------------EGQLKFPRGVA 252
V VS+ NHR+ +F G I+ F S+GS+ G+ +P +A
Sbjct: 130 VYVSEYGNHRISVFTGEGVFISRFESQGSKVDSPCGLTFDKDGFFKGSANGEFLYPCNIA 189
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV--MSNGNILVCD 310
+D Q + V D N+ IQ F+PDG+F+ FG GSG G FK G+A+ + G + V +
Sbjct: 190 IDSQELVYVTDYDNHCIQKFSPDGKFVGQFGTKGSGPGNFKEPVGIAIDTAATGLVYVSE 249
Query: 311 RENHRIQVF 319
+ N+RI VF
Sbjct: 250 QGNNRISVF 258
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 117/225 (52%), Gaps = 14/225 (6%)
Query: 100 PRGIAV-GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG-QLEHPHYIAVSNTNR 157
P G+AV N ++V ++ + + DG V G G + P +A++
Sbjct: 470 PWGVAVCNHSNCVIVTENLGQCITILDRDGKKVKSLGGKGGSGDVKFSFPRGLAITPDKF 529
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSD 216
++VSD NHR+Q + DG G GN Q P+ IA+S T +V V+D
Sbjct: 530 ILVSD--NHRIQKISM-------DGYLKASVGEEGNGPLQFNTPYGIAISPITGQVYVAD 580
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+NHR+Q+ + + SFGSEGS GQ +P G+A+DDQ ++ V D N+RIQ F+ DG
Sbjct: 581 KSNHRIQVLNPDLTFSHSFGSEGSANGQFSYPVGIAIDDQEFVYVTDFKNHRIQKFSSDG 640
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRE--NHRIQVF 319
+FL FG GSG G+ G+A+ + LV E N+RI VF
Sbjct: 641 EFLDKFGIRGSGPGQLNRPHGIAIDTGATGLVYAVEWANNRISVF 685
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 127 DGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFV 185
DG FV G G+++ Q + P +A+S T +V ++D +NHR+Q V D TF
Sbjct: 2 DGYFVASVGENGSESLQFKAPRSMAISPITGQVYIADRDNHRIQ-------VLNPDLTFS 54
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL 245
FG +G+ GQ P IA+ + V VSD HR+Q F +G + FG+EG GQL
Sbjct: 55 HSFGKIGSADGQFLFPLGIAIDSQGFVYVSDFGCHRIQKFFSDGSFLAQFGTEGPGPGQL 114
Query: 246 KFPRGVAVDD--QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGS-----------GDGEF 292
P G+A+D G + V + GN+RI +FT +G F+ F GS DG F
Sbjct: 115 NSPFGIAIDTAATGLVYVSEYGNHRISVFTGEGVFISRFESQGSKVDSPCGLTFDKDGFF 174
Query: 293 KGLE--------GVAVMSNGNILVCDRENHRIQVF 319
KG +A+ S + V D +NH IQ F
Sbjct: 175 KGSANGEFLYPCNIAIDSQELVYVTDYDNHCIQKF 209
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 117/251 (46%), Gaps = 47/251 (18%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------- 96
G GS G F +P GIA+ + V+D HR+Q F ++ FLA
Sbjct: 57 FGKIGSADGQFLFPLGIAIDSQGFVYVSDFGCHRIQKFF------SDGSFLAQFGTEGPG 110
Query: 97 ---FTWPRGIAVGPDNS--IVVADSSNHRVQVFQSDGTFVGKFGSMGNKA---------- 141
P GIA+ + + V++ NHR+ VF +G F+ +F S G+K
Sbjct: 111 PGQLNSPFGIAIDTAATGLVYVSEYGNHRISVFTGEGVFISRFESQGSKVDSPCGLTFDK 170
Query: 142 ---------GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
G+ +P IA+ + V V+D +NH +Q F DG FVG+FG+ G
Sbjct: 171 DGFFKGSANGEFLYPCNIAIDSQELVYVTDYDNHCIQ-------KFSPDGKFVGQFGTKG 223
Query: 193 NKAGQLEHPHYIAV--SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRG 250
+ G + P IA+ + T V VS+ N+R+ +F +G + FGS+GS Q P G
Sbjct: 224 SGPGNFKEPVGIAIDTAATGLVYVSEQGNNRISVFTSDGVFLDRFGSKGSYRDQFDHPYG 283
Query: 251 VAVDDQGYISV 261
+ D G++++
Sbjct: 284 LTFDKNGFLNL 294
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 96/195 (49%), Gaps = 19/195 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGP-DNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--- 96
L+ +G G+ P F P GIA+ P + VAD SNHR+QV P DL + F +
Sbjct: 547 LKASVGEEGNGPLQFNTPYGIAISPITGQVYVADKSNHRIQVLNP--DLTFSHSFGSEGS 604
Query: 97 ----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
F++P GIA+ + V D NHR+Q F SDG F+ KFG G+ GQL PH IA+
Sbjct: 605 ANGQFSYPVGIAIDDQEFVYVTDFKNHRIQKFSSDGEFLDKFGIRGSGPGQLNRPHGIAI 664
Query: 153 SN--TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
T V + N+R+ VF + G FV FGS G+ Q P+ +
Sbjct: 665 DTGATGLVYAVEWANNRIS-------VFTNKGEFVNSFGSEGSSIDQFSAPYGLTFDKDG 717
Query: 211 RVIVSDSNNHRVQIF 225
+ V D N R+ ++
Sbjct: 718 FLYVCDYNMSRIVVY 732
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
++G + S G GSE Q K PR +A+ G + + D N+RIQ+ PD F +FG
Sbjct: 1 MDGYFVASVGENGSESLQFKAPRSMAISPITGQVYIADRDNHRIQVLNPDLTFSHSFGKI 60
Query: 286 GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GS DG+F G+A+ S G + V D HRIQ F
Sbjct: 61 GSADGQFLFPLGIAIDSQGFVYVSDFGCHRIQKF 94
>gi|312370929|gb|EFR19228.1| hypothetical protein AND_22868 [Anopheles darlingi]
Length = 943
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 141/288 (48%), Gaps = 34/288 (11%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH--FDLKTNCVFLA---F 97
G G E G + P GI V D I+VAD N+RVQ+ +P F LK A F
Sbjct: 617 LTFGFDGHEDGQVSRPWGITVDKDGHILVADRRNNRVQIFYPDGTFKLKFGSKGTANGQF 676
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P GI I+V D NHRVQVF + G F+ KFGS G + GQ ++P +AV+
Sbjct: 677 DLPAGICTDGQGRIIVVDKDNHRVQVFSAAGVFLLKFGSYGKECGQFQYPWDVAVNTKGE 736
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR------ 211
++V+DS NHR+Q+ F DG F+ +F G + H Y+ T R
Sbjct: 737 ILVTDSRNHRIQL-------FSPDGLFISRFSFDG-----VNHSRYLKGLTTPRGACFTP 784
Query: 212 ---VIVSDSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+I+SD NHR+ + D +V+ + G EGS + P G+ DD G + V DS N
Sbjct: 785 QGDIIISDFENHRLLLIDATLSKVLAAKGHEGSAVHEFSRPSGICCDDDGRVIVADSKNQ 844
Query: 268 RIQIFTPDGQFLRAFGCWGSGDG-------EFKGLEGVAVMSNGNILV 308
R+ IFTP +FL A S +G E VA++ +G ++V
Sbjct: 845 RVLIFTPQLEFLWATEIRPSSNGLHAIGMDEKDRPSDVALLPDGRLVV 892
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 120/225 (53%), Gaps = 12/225 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GI V D I+VAD N+RVQ+F DGTF KFGS G GQ + P I R+I
Sbjct: 632 PWGITVDKDGHILVADRRNNRVQIFYPDGTFKLKFGSKGTANGQFDLPAGICTDGQGRII 691
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D +NHRVQ VF + G F+ KFGS G + GQ ++P +AV+ ++V+DS N
Sbjct: 692 VVDKDNHRVQ-------VFSAAGVFLLKFGSYGKECGQFQYPWDVAVNTKGEILVTDSRN 744
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQ----LKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
HR+Q+F +G I+ F +G + L PRG QG I + D N+R+ +
Sbjct: 745 HRIQLFSPDGLFISRFSFDGVNHSRYLKGLTTPRGACFTPQGDIIISDFENHRLLLIDAT 804
Query: 276 -GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ L A G GS EF G+ +G ++V D +N R+ +F
Sbjct: 805 LSKVLAAKGHEGSAVHEFSRPSGICCDDDGRVIVADSKNQRVLIF 849
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G++ GQ+ P I V ++V+D N+RVQIF DGTF KFGS G
Sbjct: 619 FGFDGHEDGQVSRPWGITVDKDGHILVADRRNNRVQIF-------YPDGTFKLKFGSKGT 671
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
GQ + P I R+IV D +NHRVQ+F G + FGS G E GQ ++P VAV
Sbjct: 672 ANGQFDLPAGICTDGQGRIIVVDKDNHRVQVFSAAGVFLLKFGSYGKECGQFQYPWDVAV 731
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF-KGL---EGVAVMSNGNILVC 309
+ +G I V DS N+RIQ+F+PDG F+ F G + KGL G G+I++
Sbjct: 732 NTKGEILVTDSRNHRIQLFSPDGLFISRFSFDGVNHSRYLKGLTTPRGACFTPQGDIIIS 791
Query: 310 DRENHRIQVF 319
D ENHR+ +
Sbjct: 792 DFENHRLLLI 801
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 88/205 (42%), Gaps = 37/205 (18%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
+ K GS+G+ G F P GI I+V D NHRVQV VFL
Sbjct: 662 FKLKFGSKGTANGQFDLPAGICTDGQGRIIVVDKDNHRVQV------FSAAGVFLLKFGS 715
Query: 97 -------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
F +P +AV I+V DS NHR+Q+F DG F+ +F G + H Y
Sbjct: 716 YGKECGQFQYPWDVAVNTKGEILVTDSRNHRIQLFSPDGLFISRFSFDG-----VNHSRY 770
Query: 150 IAVSNTNR---------VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
+ T R +I+SD NHR+ + D + + G G+ +
Sbjct: 771 LKGLTTPRGACFTPQGDIIISDFENHRLLLIDA------TLSKVLAAKGHEGSAVHEFSR 824
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIF 225
P I + RVIV+DS N RV IF
Sbjct: 825 PSGICCDDDGRVIVADSKNQRVLIF 849
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 55/86 (63%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+FG +G E+GQ+ P G+ VD G+I V D NNR+QIF PDG F FG G+ +G+F
Sbjct: 618 TFGFDGHEDGQVSRPWGITVDKDGHILVADRRNNRVQIFYPDGTFKLKFGSKGTANGQFD 677
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ G I+V D++NHR+QVF
Sbjct: 678 LPAGICTDGQGRIIVVDKDNHRVQVF 703
>gi|355726076|gb|AES08756.1| tripartite motif-containing 3 [Mustela putorius furo]
Length = 455
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 142/287 (49%), Gaps = 23/287 (8%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 181 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 240
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 241 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 295
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 296 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 348
Query: 216 DSNNHRVQ---IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
D +NH V+ ++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 349 DFHNHSVKAVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVF 408
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL G +G+A+ S+G+++V D NH + +
Sbjct: 409 DSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 452
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 124/233 (53%), Gaps = 7/233 (3%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 227 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 286
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 287 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 346
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V+ +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 347 VTDFHNHSVKAV----KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 402
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V D+GN+ + +
Sbjct: 403 SRIQVFDSSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADAGNHCFKAY 452
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 177 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 236
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 237 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 269
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 369 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTSA 422
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 423 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 453
>gi|340724286|ref|XP_003400514.1| PREDICTED: tripartite motif-containing protein 71-like [Bombus
terrestris]
Length = 711
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 153/284 (53%), Gaps = 22/284 (7%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------F 97
IG+ G+ P G+A + ++VAD SN+R+Q+ + D F + F
Sbjct: 435 IGNTGNIDDNLCRPWGVACDREGHMIVADRSNNRIQI-YRQEDGSFVRRFGSYGTGPGQF 493
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+AV I+VAD NHR+Q+ +G F+ FG G++ GQ +P +AV+ +
Sbjct: 494 DRPAGVAVDARRRIIVADKDNHRIQILTMEGQFLLCFGEKGSRCGQFNYPWDVAVNTECQ 553
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVSNTNRVIVS 215
++VSD+ N R+Q+ F ++G F+ K+G S N + P +A + +++ +
Sbjct: 554 IVVSDTRNRRIQL-------FSAEGIFLRKYGYESSPNMWKYFDSPRGVAFNPEGQIVTT 606
Query: 216 DSNNHRVQIFDVN---GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
D NNHRV I D + +++ + G++ Q P+G+ +DD+G I V DS N+R+QIF
Sbjct: 607 DFNNHRVVIIDADCTKAKILECKNTGGNK--QFLRPQGLVIDDEGNIIVADSRNHRVQIF 664
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
G F+R FG +G GD E G+++ +G I V D N+R+
Sbjct: 665 DSSGTFIRRFGSYGKGDDEMDRPSGISLCPDGRIAVVDFGNNRL 708
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 127/224 (56%), Gaps = 11/224 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVF-QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P G+A + ++VAD SN+R+Q++ Q DG+FV +FGS G GQ + P +AV R+
Sbjct: 448 PWGVACDREGHMIVADRSNNRIQIYRQEDGSFVRRFGSYGTGPGQFDRPAGVAVDARRRI 507
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
IV+D +NHR+QI + +G F+ FG G++ GQ +P +AV+ +++VSD+
Sbjct: 508 IVADKDNHRIQILTM-------EGQFLLCFGEKGSRCGQFNYPWDVAVNTECQIVVSDTR 560
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKF--PRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
N R+Q+F G + +G E S F PRGVA + +G I D N+R+ I D
Sbjct: 561 NRRIQLFSAEGIFLRKYGYESSPNMWKYFDSPRGVAFNPEGQIVTTDFNNHRVVIIDADC 620
Query: 277 QFLRAFGCWGSG-DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ C +G + +F +G+ + GNI+V D NHR+Q+F
Sbjct: 621 TKAKILECKNTGGNKQFLRPQGLVIDDEGNIIVADSRNHRVQIF 664
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 125/242 (51%), Gaps = 25/242 (10%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------- 95
+ GS G+ PG F P G+AV I+VAD NHR+Q+ L FL
Sbjct: 482 RFGSYGTGPGQFDRPAGVAVDARRRIIVADKDNHRIQI------LTMEGQFLLCFGEKGS 535
Query: 96 ---AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG--SMGNKAGQLEHPHYI 150
F +P +AV + IVV+D+ N R+Q+F ++G F+ K+G S N + P +
Sbjct: 536 RCGQFNYPWDVAVNTECQIVVSDTRNRRIQLFSAEGIFLRKYGYESSPNMWKYFDSPRGV 595
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
A + +++ +D NNHRV I D + + + + GNK Q P + + +
Sbjct: 596 AFNPEGQIVTTDFNNHRVVIIDADC----TKAKILECKNTGGNK--QFLRPQGLVIDDEG 649
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
+IV+DS NHRVQIFD +G I FGS G + ++ P G+++ G I+V D GNNR+
Sbjct: 650 NIIVADSRNHRVQIFDSSGTFIRRFGSYGKGDDEMDRPSGISLCPDGRIAVVDFGNNRLL 709
Query: 271 IF 272
+
Sbjct: 710 LI 711
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 122/239 (51%), Gaps = 14/239 (5%)
Query: 84 PHFDLKTNCVFLAFTWPRGIAVGPD-NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
P L+ V + + RGIAV ++V + N V + + G+ GN
Sbjct: 389 PRILLEHRSVSVEISPVRGIAVALSIVPVIVKINRNPDVPM-----KPIKIIGNTGNIDD 443
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
L P +A +IV+D +N+R+QI+ Q DG+FV +FGS G GQ + P
Sbjct: 444 NLCRPWGVACDREGHMIVADRSNNRIQIYR------QEDGSFVRRFGSYGTGPGQFDRPA 497
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
+AV R+IV+D +NHR+QI + G+ + FG +GS GQ +P VAV+ + I V
Sbjct: 498 GVAVDARRRIIVADKDNHRIQILTMEGQFLLCFGEKGSRCGQFNYPWDVAVNTECQIVVS 557
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGD--GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D+ N RIQ+F+ +G FLR +G S + F GVA G I+ D NHR+ +
Sbjct: 558 DTRNRRIQLFSAEGIFLRKYGYESSPNMWKYFDSPRGVAFNPEGQIVTTDFNNHRVVII 616
>gi|405966025|gb|EKC31350.1| Tripartite motif-containing protein 71 [Crassostrea gigas]
Length = 708
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 109/195 (55%), Gaps = 29/195 (14%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ D I+VAD SN+R+QVF+ DG F KFGS G + GQ + P +AV NRV+
Sbjct: 521 PWGVCCDKDGYIIVADRSNNRIQVFKPDGQFHHKFGSSGTRNGQFDRPAGVAVDLQNRVV 580
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH------------------- 200
V+D +NHR+QIFD+ +G F+ KFG GNK GQ +
Sbjct: 581 VADKDNHRIQIFDI-------EGNFILKFGEKGNKNGQFNYPWDIATARFLGTEGSSNGQ 633
Query: 201 ---PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
P +AV ++V+DS NHRVQIF NG + FG+ G+ GQL P G+ V +G
Sbjct: 634 FLRPQGVAVDQEGNIVVADSKNHRVQIFQPNGNFLCKFGTNGTGPGQLDRPSGICVSPEG 693
Query: 258 YISVGDSGNNRIQIF 272
I V D GNNR+Q+F
Sbjct: 694 LIIVVDFGNNRVQVF 708
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 117/218 (53%), Gaps = 29/218 (13%)
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGT 183
+ S G + +FGS G G L P + +IV+D +N+R+Q VF+ DG
Sbjct: 498 YNSIGNMLLQFGSEGEADGMLCRPWGVCCDKDGYIIVADRSNNRIQ-------VFKPDGQ 550
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG------- 236
F KFGS G + GQ + P +AV NRV+V+D +NHR+QIFD+ G I FG
Sbjct: 551 FHHKFGSSGTRNGQFDRPAGVAVDLQNRVVVADKDNHRIQIFDIEGNFILKFGEKGNKNG 610
Query: 237 ---------------SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+EGS GQ P+GVAVD +G I V DS N+R+QIF P+G FL
Sbjct: 611 QFNYPWDIATARFLGTEGSSNGQFLRPQGVAVDQEGNIVVADSKNHRVQIFQPNGNFLCK 670
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+G G+ G+ V G I+V D N+R+QVF
Sbjct: 671 FGTNGTGPGQLDRPSGICVSPEGLIIVVDFGNNRVQVF 708
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 105/212 (49%), Gaps = 36/212 (16%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLK---TNCVFL 95
LQF GS G G P G+ D I+VAD SN+R+QV P F K +
Sbjct: 506 LQF--GSEGEADGMLCRPWGVCCDKDGYIIVADRSNNRIQVFKPDGQFHHKFGSSGTRNG 563
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH--------- 146
F P G+AV N +VVAD NHR+Q+F +G F+ KFG GNK GQ +
Sbjct: 564 QFDRPAGVAVDLQNRVVVADKDNHRIQIFDIEGNFILKFGEKGNKNGQFNYPWDIATARF 623
Query: 147 -------------PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
P +AV ++V+DS NHRVQI FQ +G F+ KFG+ G
Sbjct: 624 LGTEGSSNGQFLRPQGVAVDQEGNIVVADSKNHRVQI-------FQPNGNFLCKFGTNGT 676
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
GQL+ P I VS +IV D N+RVQ+F
Sbjct: 677 GPGQLDRPSGICVSPEGLIIVVDFGNNRVQVF 708
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 88/168 (52%), Gaps = 22/168 (13%)
Query: 174 NGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT 233
+GR + S G + +FGS G G L P + +IV+D +N+R+Q+F +G+
Sbjct: 494 SGRNYNSIGNMLLQFGSEGEADGMLCRPWGVCCDKDGYIIVADRSNNRIQVFKPDGQFHH 553
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG---------- 283
FGS G+ GQ P GVAVD Q + V D N+RIQIF +G F+ FG
Sbjct: 554 KFGSSGTRNGQFDRPAGVAVDLQNRVVVADKDNHRIQIFDIEGNFILKFGEKGNKNGQFN 613
Query: 284 -CW-----------GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
W GS +G+F +GVAV GNI+V D +NHR+Q+F
Sbjct: 614 YPWDIATARFLGTEGSSNGQFLRPQGVAVDQEGNIVVADSKNHRVQIF 661
>gi|397781302|ref|YP_006545775.1| Tripartite motif-containing protein 71 [Methanoculleus bourgensis
MS2]
gi|396939804|emb|CCJ37059.1| Tripartite motif-containing protein 71 AltName: Full=Lin-41 homolog
[Methanoculleus bourgensis MS2]
Length = 786
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 143/285 (50%), Gaps = 20/285 (7%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--------- 96
G + S G F P IAV ++ VAD + + C FD ++ FL
Sbjct: 350 GFKDSRDGEFLRPFDIAVDAAGNVYVADEIHTCIHPCIHKFD--SSGKFLTRWGIRGSGN 407
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F GIA ++ V D + R+Q F S G F+ K+GS G G++ I
Sbjct: 408 GMFWKVAGIAADDSGNVYVTDCHSPRIQKFDSAGNFLMKWGSYGTGDGEILGASGIKTDA 467
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ V V+D N R+Q F+ S G F+ K+GS G G+ P IAV + + V
Sbjct: 468 SGNVYVADPGNGRIQKFN-------SAGNFLMKWGSYGTGNGEFMWPKGIAVDASGNIYV 520
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+D ++ +Q FD G +T +GS G +G+ + P GVA+D G + V D N+RIQ F
Sbjct: 521 TDYHSSHIQKFDSAGNFLTKWGSYGRGDGEFRNPSGVAIDAAGNVYVADKENHRIQKFDS 580
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
DG L +G +G GDGEF+ GVAV + GN+ V DR N RIQ+F
Sbjct: 581 DGTPLTKWGSYGGGDGEFRQPSGVAVDAAGNVYVADRGNGRIQMF 625
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 118/238 (49%), Gaps = 20/238 (8%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW---- 99
+ G RGS G F GIA ++ V D + R+Q FD N + ++
Sbjct: 399 RWGIRGSGNGMFWKVAGIAADDSGNVYVTDCHSPRIQ----KFDSAGNFLMKWGSYGTGD 454
Query: 100 -----PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
GI ++ VAD N R+Q F S G F+ K+GS G G+ P IAV
Sbjct: 455 GEILGASGIKTDASGNVYVADPGNGRIQKFNSAGNFLMKWGSYGTGNGEFMWPKGIAVDA 514
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ + V+D ++ +Q FD S G F+ K+GS G G+ +P +A+ V V
Sbjct: 515 SGNIYVTDYHSSHIQKFD-------SAGNFLTKWGSYGRGDGEFRNPSGVAIDAAGNVYV 567
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+D NHR+Q FD +G +T +GS G +G+ + P GVAVD G + V D GN RIQ+F
Sbjct: 568 ADKENHRIQKFDSDGTPLTKWGSYGGGDGEFRQPSGVAVDAAGNVYVADRGNGRIQMF 625
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 8/215 (3%)
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
AF P+G+AV ++ VAD N+R+Q F SDG + K+GS G G+ P IAV
Sbjct: 77 AFDTPKGVAVDAAGNVYVADRGNNRIQKFDSDGNLLAKWGSHGKGDGEFRQPSSIAVDAA 136
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
V V+D N+R+QIFD S G F+ K+ G + IAV + + V
Sbjct: 137 GNVYVTDVGNNRIQIFD-------SAGNFLMKWEPCGTGDAEFWGVCSIAVDVSGNIYVV 189
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
+ +++ +Q FD +G+++T +GS G+ E + G+AVDD G I D + IQ F
Sbjct: 190 NEDDYYIQKFDRSGKLLTKWGSRGTGEEPWEVA-GIAVDDSGNIYATDWRHRCIQKFNSS 248
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
G FL + G D + G+AV ++GN+ V D
Sbjct: 249 GNFLTKWELHGLDDAVYVAPTGIAVDTSGNVYVYD 283
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 143/341 (41%), Gaps = 69/341 (20%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV- 93
+L K L G + + P GIAV ++ V D S FD N +
Sbjct: 251 FLTKWELH------GLDDAVYVAPTGIAVDTSGNVYVYDVS------YIQKFDSSGNFLA 298
Query: 94 -----------FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
FL + GIAV +I VA+ + +Q F S G F +G ++ G
Sbjct: 299 QRESGGWVDGRFLPSSSAAGIAVDATGNIYVANKDHCCIQKFDSSGKFT-TWGFKDSRDG 357
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNH----RVQIFDVNGRV--------------------- 177
+ P IAV V V+D + + FD +G+
Sbjct: 358 EFLRPFDIAVDAAGNVYVADEIHTCIHPCIHKFDSSGKFLTRWGIRGSGNGMFWKVAGIA 417
Query: 178 -------------------FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
F S G F+ K+GS G G++ I + V V+D
Sbjct: 418 ADDSGNVYVTDCHSPRIQKFDSAGNFLMKWGSYGTGDGEILGASGIKTDASGNVYVADPG 477
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
N R+Q F+ G + +GS G+ G+ +P+G+AVD G I V D ++ IQ F G F
Sbjct: 478 NGRIQKFNSAGNFLMKWGSYGTGNGEFMWPKGIAVDASGNIYVTDYHSSHIQKFDSAGNF 537
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L +G +G GDGEF+ GVA+ + GN+ V D+ENHRIQ F
Sbjct: 538 LTKWGSYGRGDGEFRNPSGVAIDAAGNVYVADKENHRIQKF 578
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 135/292 (46%), Gaps = 27/292 (9%)
Query: 41 LQFKIGSRG-SEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---- 95
L K G++ +E G F P+G+AV ++ VAD N+R+Q FD N +
Sbjct: 63 LVMKWGTKAYTEDGAFDTPKGVAVDAAGNVYVADRGNNRIQ----KFDSDGNLLAKWGSH 118
Query: 96 -----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
F P IAV ++ V D N+R+Q+F S G F+ K+ G + I
Sbjct: 119 GKGDGEFRQPSSIAVDAAGNVYVTDVGNNRIQIFDSAGNFLMKWEPCGTGDAEFWGVCSI 178
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
AV + + V + +++ +Q FD +G++ K+GS G E IAV ++
Sbjct: 179 AVDVSGNIYVVNEDDYYIQKFDRSGKLLT-------KWGSRGTGEEPWEVAG-IAVDDSG 230
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
+ +D + +Q F+ +G +T + G ++ P G+AVD G + V D + IQ
Sbjct: 231 NIYATDWRHRCIQKFNSSGNFLTKWELHGLDDAVYVAPTGIAVDTSGNVYVYDV--SYIQ 288
Query: 271 IFTPDGQFLRAFGCWGSGDGEF---KGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL G DG F G+AV + GNI V ++++ IQ F
Sbjct: 289 KFDSSGNFLAQRESGGWVDGRFLPSSSAAGIAVDATGNIYVANKDHCCIQKF 340
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 80/138 (57%), Gaps = 1/138 (0%)
Query: 183 TFVGKFGSMG-NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSE 241
T V K+G+ + G + P +AV V V+D N+R+Q FD +G ++ +GS G
Sbjct: 62 TLVMKWGTKAYTEDGAFDTPKGVAVDAAGNVYVADRGNNRIQKFDSDGNLLAKWGSHGKG 121
Query: 242 EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVM 301
+G+ + P +AVD G + V D GNNRIQIF G FL + G+GD EF G+ +AV
Sbjct: 122 DGEFRQPSSIAVDAAGNVYVTDVGNNRIQIFDSAGNFLMKWEPCGTGDAEFWGVCSIAVD 181
Query: 302 SNGNILVCDRENHRIQVF 319
+GNI V + +++ IQ F
Sbjct: 182 VSGNIYVVNEDDYYIQKF 199
>gi|357625536|gb|EHJ75948.1| dappled [Danaus plexippus]
Length = 770
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 122/225 (54%), Gaps = 12/225 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ V + +I+VAD N+R+Q+F S G F FGS G G+ + P I R+I
Sbjct: 494 PWGLCVDREGNIIVADRRNNRIQIFNSRGEFRTMFGSKGIGPGEFDLPAGITTDTYGRII 553
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D +NHRVQIF S G F+ KFGS G + GQ ++P +AV+ ++V+D+ N
Sbjct: 554 VIDKDNHRVQIF-------TSSGNFILKFGSFGKECGQFQYPWDVAVNTLGNIVVTDTRN 606
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQL----KFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
HR+Q+F +G IT F EG+ ++ PRGV G I V D N+R+ + P
Sbjct: 607 HRIQLFTSDGTYITKFVFEGANPAKMLKGPTTPRGVCFTTSGNIIVSDFENHRLLMVDPT 666
Query: 276 -GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ L G GSG GE G+ +G I+V D +NHR+ VF
Sbjct: 667 LSKVLHCVGREGSGIGELNRPSGIVTDDDGRIIVADSKNHRVLVF 711
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 144/278 (51%), Gaps = 21/278 (7%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------ 96
F G G + G + P G+ V + +I+VAD N+R+Q+ + +T +F +
Sbjct: 479 FSFGREGQDEGQVSRPWGLCVDREGNIIVADRRNNRIQIFNSRGEFRT--MFGSKGIGPG 536
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GI I+V D NHRVQ+F S G F+ KFGS G + GQ ++P +AV+
Sbjct: 537 EFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKECGQFQYPWDVAVNTL 596
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG-NKAGQLE---HPHYIAVSNTNR 211
++V+D+ NHR+Q+ F SDGT++ KF G N A L+ P + + +
Sbjct: 597 GNIVVTDTRNHRIQL-------FTSDGTYITKFVFEGANPAKMLKGPTTPRGVCFTTSGN 649
Query: 212 VIVSDSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
+IVSD NHR+ + D +V+ G EGS G+L P G+ DD G I V DS N+R+
Sbjct: 650 IIVSDFENHRLLMVDPTLSKVLHCVGREGSGIGELNRPSGIVTDDDGRIIVADSKNHRVL 709
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
+FT + + L A G + VA+ G ++V
Sbjct: 710 VFTSELRILWAVDLKSPGLDDKDRPSDVALTPEGFLVV 747
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 102/187 (54%), Gaps = 11/187 (5%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G GQ+ P + V +IV+D N+R+QIF+ S G F FGS G
Sbjct: 481 FGREGQDEGQVSRPWGLCVDREGNIIVADRRNNRIQIFN-------SRGEFRTMFGSKGI 533
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
G+ + P I R+IV D +NHRVQIF +G I FGS G E GQ ++P VAV
Sbjct: 534 GPGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKECGQFQYPWDVAV 593
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE-FKG---LEGVAVMSNGNILVC 309
+ G I V D+ N+RIQ+FT DG ++ F G+ + KG GV ++GNI+V
Sbjct: 594 NTLGNIVVTDTRNHRIQLFTSDGTYITKFVFEGANPAKMLKGPTTPRGVCFTTSGNIIVS 653
Query: 310 DRENHRI 316
D ENHR+
Sbjct: 654 DFENHRL 660
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 75/132 (56%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG G GQ+ P + V +IV+D N+R+QIF+ G T FGS+G G+
Sbjct: 481 FGREGQDEGQVSRPWGLCVDREGNIIVADRRNNRIQIFNSRGEFRTMFGSKGIGPGEFDL 540
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+ D G I V D N+R+QIFT G F+ FG +G G+F+ VAV + GNI+
Sbjct: 541 PAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKECGQFQYPWDVAVNTLGNIV 600
Query: 308 VCDRENHRIQVF 319
V D NHRIQ+F
Sbjct: 601 VTDTRNHRIQLF 612
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 58/93 (62%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
V+G + SFG EG +EGQ+ P G+ VD +G I V D NNRIQIF G+F FG G
Sbjct: 473 VSGVPMFSFGREGQDEGQVSRPWGLCVDREGNIIVADRRNNRIQIFNSRGEFRTMFGSKG 532
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G GEF G+ + G I+V D++NHR+Q+F
Sbjct: 533 IGPGEFDLPAGITTDTYGRIIVIDKDNHRVQIF 565
>gi|156370856|ref|XP_001628483.1| predicted protein [Nematostella vectensis]
gi|156215461|gb|EDO36420.1| predicted protein [Nematostella vectensis]
Length = 789
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 153/287 (53%), Gaps = 26/287 (9%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------A 96
GS+ G FT P G+AV I V+D+ + V V FD + V
Sbjct: 479 GSQTGRKGNFTHPHGVAVSETGEIAVSDTQKNCVHV----FDAEGRKVMDIGGYGTDDGQ 534
Query: 97 FTWPRGIAVGPDN-SIVVADSSNHRVQVF-QSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
+P G+A N +++VAD NHRVQ+F + +G V KFG G GQ P+ I V
Sbjct: 535 LNYPAGVAFDKGNKNLIVADRDNHRVQLFNRKNGKLVKKFGVNGKTNGQFNRPNGIFVDQ 594
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH-YIAVSNTNRVI 213
R+I++D +NHRVQ+F+ S+G F FGS + QL+HP I +
Sbjct: 595 NGRMIITDWHNHRVQVFN-------SEGRFQFAFGS--SPQDQLKHPRDAIYHEPAEKFF 645
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
VSD+ ++ ++++D G+ + + G G+++G+L PRG+A+D +G + V D N+R+Q F+
Sbjct: 646 VSDTGHNVLKVYDKKGKFLRTIGKPGNKKGELFSPRGLAIDKKGRLIVCDFDNHRLQFFS 705
Query: 274 -PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
DG L +FG G G+F GVA++ ++V D N RIQVF
Sbjct: 706 VKDGTVLNSFGSKGMHLGQFMNPMGVALLGEDQLIVTDWRNDRIQVF 752
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 78/134 (58%), Gaps = 2/134 (1%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FGS + G HPH +AVS T + VSD+ + V +FD GR + G G+++GQL +
Sbjct: 478 FGSQTGRKGNFTHPHGVAVSETGEIAVSDTQKNCVHVFDAEGRKVMDIGGYGTDDGQLNY 537
Query: 248 PRGVAVDD-QGYISVGDSGNNRIQIFT-PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
P GVA D + V D N+R+Q+F +G+ ++ FG G +G+F G+ V NG
Sbjct: 538 PAGVAFDKGNKNLIVADRDNHRVQLFNRKNGKLVKKFGVNGKTNGQFNRPNGIFVDQNGR 597
Query: 306 ILVCDRENHRIQVF 319
+++ D NHR+QVF
Sbjct: 598 MIITDWHNHRVQVF 611
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+L K G G G F P GI V + +++ D NHRVQV F+ + F +
Sbjct: 569 KLVKKFGVNGKTNGQFNRPNGIFVDQNGRMIITDWHNHRVQV----FNSEGRFQFAFGSS 624
Query: 100 PRGIAVGPDNSIV--------VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P+ P ++I V+D+ ++ ++V+ G F+ G GNK G+L P +A
Sbjct: 625 PQDQLKHPRDAIYHEPAEKFFVSDTGHNVLKVYDKKGKFLRTIGKPGNKKGELFSPRGLA 684
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
+ R+IV D +NHR+Q F V DGT + FGS G GQ +P +A+ ++
Sbjct: 685 IDKKGRLIVCDFDNHRLQFFSV------KDGTVLNSFGSKGMHLGQFMNPMGVALLGEDQ 738
Query: 212 VIVSDSNNHRVQIF 225
+IV+D N R+Q+F
Sbjct: 739 LIVTDWRNDRIQVF 752
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y +K + IG G++ G PRG+A+ ++V D NHR+Q F +K V
Sbjct: 657 YDKKGKFLRTIGKPGNKKGELFSPRGLAIDKKGRLIVCDFDNHRLQF----FSVKDGTVL 712
Query: 95 LA----------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQL 144
+ F P G+A+ ++ ++V D N R+QVF + + S+
Sbjct: 713 NSFGSKGMHLGQFMNPMGVALLGEDQLIVTDWRNDRIQVFSFESQHLIVLLSLVRLDKMR 772
Query: 145 EHPHYIAV 152
E HY+ +
Sbjct: 773 EPGHYVLL 780
>gi|260821428|ref|XP_002606035.1| hypothetical protein BRAFLDRAFT_239729 [Branchiostoma floridae]
gi|229291372|gb|EEN62045.1| hypothetical protein BRAFLDRAFT_239729 [Branchiostoma floridae]
Length = 681
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 141/279 (50%), Gaps = 18/279 (6%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWP 100
LQF G +G+ G F P GIAV +VVADS+N R+Q+ PH L+ +
Sbjct: 418 LQF--GKKGARIGRFKEPIGIAVDKLGQVVVADSTNARIQIFDPHGKFLRAFPTLS-SHA 474
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+ V P IVV + + V +F ++G + +F + P+ +AV ++V
Sbjct: 475 TGVGVSPLGDIVVVEWEQNTVMIFSAEGKLLQRF-----RCEHFRQPYGVAVRQDGWIVV 529
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+D+ HRV V DGT V G G GQ E P+++A + + +IV++ +NH
Sbjct: 530 ADAKAHRV-------FVLAPDGTLVRTVGERGTGDGQFEQPYFVATNQNDDIIVAEMSNH 582
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
RVQ+FD G FGS G + GQ P GVAVD G I V D+ N+R+Q+F DG+ L
Sbjct: 583 RVQVFDFFGNFKRKFGSYGHKLGQFSCPAGVAVDRDGQIIVVDTDNHRVQVFRDDGKVLS 642
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
S + GVA +G++ V D NH ++ +
Sbjct: 643 VI---SSAERRLNIPHGVAATDDGHVFVADTYNHCVKKY 678
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ FG +G+ G+ K P G+AVD G + V DS N RIQIF P G+FLRAF S
Sbjct: 417 VLQFGKKGARIGRFKEPIGIAVDKLGQVVVADSTNARIQIFDPHGKFLRAFPTLSS---- 472
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
GV V G+I+V + E + + +F
Sbjct: 473 --HATGVGVSPLGDIVVVEWEQNTVMIF 498
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA----FTW 99
K GS G + G F+ P G+AV D I+V D+ NHRVQV D K V +
Sbjct: 596 KFGSYGHKLGQFSCPAGVAVDRDGQIIVVDTDNHRVQVF--RDDGKVLSVISSAERRLNI 653
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQ 125
P G+A D + VAD+ NH V+ +Q
Sbjct: 654 PHGVAATDDGHVFVADTYNHCVKKYQ 679
>gi|339008739|ref|ZP_08641312.1| cell surface protein [Brevibacillus laterosporus LMG 15441]
gi|338774539|gb|EGP34069.1| cell surface protein [Brevibacillus laterosporus LMG 15441]
Length = 633
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 150/309 (48%), Gaps = 49/309 (15%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV-FLAFTW---- 99
IG+ + + P + + +I VADS NHR+ LK N L W
Sbjct: 336 IGNSRGDKKQYAGPFDVEIDKSGNIFVADSFNHRI--------LKYNSSGVLVGKWGNNF 387
Query: 100 -----------------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
PR +A+ + VADS NHR+Q F + G FV +GSMG +G
Sbjct: 388 GNGGPNAFGSLPGQFIVPRQVAIDAYGFVYVADSVNHRIQKFTNTGVFVATYGSMGYLSG 447
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
+ P +AV + + V+D+ NHR+Q F+ F ++ ++G G K GQ P
Sbjct: 448 FFQFPAGVAVDSKGNIFVADTLNHRIQKFN---PFF----IYMTEWGQKGTKEGQFNQPM 500
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG------------SEEGQLKFPRG 250
+A+ + + + V D NNHR+Q FD +GR + +G+ G +G L P G
Sbjct: 501 QLAIDSKDNIYVVDRNNHRIQKFDNSGRFLAKWGTNGGVGATDQLGNWKEGKGDLFLPIG 560
Query: 251 VAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
+A+D Q + V D+ NNR++++ +G+FL+ +G + DG F +GV + S+G + + D
Sbjct: 561 IAIDKQDRVYVADTSNNRMEMYDQEGKFLKEWGHFSGADGHFFSPQGVGIDSSGALWIAD 620
Query: 311 RENHRIQVF 319
RIQ F
Sbjct: 621 GLLQRIQKF 629
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 122/242 (50%), Gaps = 22/242 (9%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----------F 97
GS PG F PR +A+ + VADS NHR+Q VF+A F
Sbjct: 396 GSLPGQFIVPRQVAIDAYGFVYVADSVNHRIQ------KFTNTGVFVATYGSMGYLSGFF 449
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
+P G+AV +I VAD+ NHR+Q F ++ ++G G K GQ P +A+ + +
Sbjct: 450 QFPAGVAVDSKGNIFVADTLNHRIQKFNPFFIYMTEWGQKGTKEGQFNQPMQLAIDSKDN 509
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVG-----KFGSMGNKAGQLEHPHYIAVSNTNRV 212
+ V D NNHR+Q FD +GR GT G + G+ G L P IA+ +RV
Sbjct: 510 IYVVDRNNHRIQKFDNSGRFLAKWGTNGGVGATDQLGNWKEGKGDLFLPIGIAIDKQDRV 569
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V+D++N+R++++D G+ + +G +G P+GV +D G + + D RIQ F
Sbjct: 570 YVADTSNNRMEMYDQEGKFLKEWGHFSGADGHFFSPQGVGIDSSGALWIADGLLQRIQKF 629
Query: 273 TP 274
P
Sbjct: 630 VP 631
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 23/297 (7%)
Query: 38 KRRLQFKIGSRGSEPGCFTWPRGIAVGP-DNSIVVADSSNHRVQVCFPHFD--LKTNCVF 94
K + Q G G P F +PRGI P + VAD+ N+R+ + F D L T +F
Sbjct: 235 KFQRQIGKGESGLGPCQFNFPRGINFDPLSGAFYVADTFNNRI-MKFDQQDRFLYTVGLF 293
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG---QLEHPHYIA 151
+P + V D+ N+R+ V++ GS+GN G Q P +
Sbjct: 294 PILIYPNQVLPDGGGKFYVTDTGNNRIVVYKDSVLSAVLDGSIGNSRGDKKQYAGPFDVE 353
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG---------SMGNKAGQLEHPH 202
+ + + V+DS NHR+ ++ S G VGK+G + G+ GQ P
Sbjct: 354 IDKSGNIFVADSFNHRILKYN-------SSGVLVGKWGNNFGNGGPNAFGSLPGQFIVPR 406
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
+A+ V V+DS NHR+Q F G + ++GS G G +FP GVAVD +G I V
Sbjct: 407 QVAIDAYGFVYVADSVNHRIQKFTNTGVFVATYGSMGYLSGFFQFPAGVAVDSKGNIFVA 466
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D+ N+RIQ F P ++ +G G+ +G+F +A+ S NI V DR NHRIQ F
Sbjct: 467 DTLNHRIQKFNPFFIYMTEWGQKGTKEGQFNQPMQLAIDSKDNIYVVDRNNHRIQKF 523
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 112/226 (49%), Gaps = 10/226 (4%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P +A +I VAD NHR+ G + FG +G+K G+ P +A+
Sbjct: 62 FRTPVAMAKDLTGNIYVADMGNHRIVKMNKSGKVLETFGGLGDKPGKFNMPFGVAIDKEG 121
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++V+D+ N+R+Q FD F+ +G+ G G+ P +AV + N V+D
Sbjct: 122 NILVADTGNYRIQKFD-------HQFHFLKSWGTRGKGEGEFGFPRELAVDSKNNYYVTD 174
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
NHR+Q FD G + + G+ G +G+L P+G+A+ + + D+ NNRIQ+F G
Sbjct: 175 EYNHRIQKFDQAGAYLLTIGTYGKGQGELALPQGIAISPTDEVYIADTFNNRIQVFNDKG 234
Query: 277 QFLRAFGCWGSGDG--EFKGLEGVAVMS-NGNILVCDRENHRIQVF 319
+F R G SG G +F G+ +G V D N+RI F
Sbjct: 235 KFQRQIGKGESGLGPCQFNFPRGINFDPLSGAFYVADTFNNRIMKF 280
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 118/248 (47%), Gaps = 15/248 (6%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWP 100
G+ +P F P +A +I VAD NHR+ + L F P
Sbjct: 53 GNEADDPSMFRTPVAMAKDLTGNIYVADMGNHRIVKMNKSGKVLETFGGLGDKPGKFNMP 112
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+A+ + +I+VAD+ N+R+Q F F+ +G+ G G+ P +AV + N V
Sbjct: 113 FGVAIDKEGNILVADTGNYRIQKFDHQFHFLKSWGTRGKGEGEFGFPRELAVDSKNNYYV 172
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+D NHR+Q FD G + GT+ G G+L P IA+S T+ V ++D+ N+
Sbjct: 173 TDEYNHRIQKFDQAGAYLLTIGTY-------GKGQGELALPQGIAISPTDEVYIADTFNN 225
Query: 221 RVQIFDVNGRVITSFGSEGSEEG--QLKFPRGVAVDD-QGYISVGDSGNNRIQIFTPDGQ 277
R+Q+F+ G+ G S G Q FPRG+ D G V D+ NNRI F +
Sbjct: 226 RIQVFNDKGKFQRQIGKGESGLGPCQFNFPRGINFDPLSGAFYVADTFNNRIMKFDQQDR 285
Query: 278 FLRAFGCW 285
FL G +
Sbjct: 286 FLYTVGLF 293
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 7/197 (3%)
Query: 123 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDG 182
VF S T+ +G+ + P +A T + V+D NHR+ + +G+V ++
Sbjct: 41 VFASSFTYSEAWGNEADDPSMFRTPVAMAKDLTGNIYVADMGNHRIVKMNKSGKVLET-- 98
Query: 183 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
FG +G+K G+ P +A+ ++V+D+ N+R+Q FD + S+G+ G E
Sbjct: 99 -----FGGLGDKPGKFNMPFGVAIDKEGNILVADTGNYRIQKFDHQFHFLKSWGTRGKGE 153
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMS 302
G+ FPR +AVD + V D N+RIQ F G +L G +G G GE +G+A+
Sbjct: 154 GEFGFPRELAVDSKNNYYVTDEYNHRIQKFDQAGAYLLTIGTYGKGQGELALPQGIAISP 213
Query: 303 NGNILVCDRENHRIQVF 319
+ + D N+RIQVF
Sbjct: 214 TDEVYIADTFNNRIQVF 230
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 134/281 (47%), Gaps = 18/281 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTW 99
G G +PG F P G+A+ + +I+VAD+ N+R+Q F + F +
Sbjct: 99 FGGLGDKPGKFNMPFGVAIDKEGNILVADTGNYRIQKFDHQFHFLKSWGTRGKGEGEFGF 158
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PR +AV N+ V D NHR+Q F G ++ G+ G G+L P IA+S T+ V
Sbjct: 159 PRELAVDSKNNYYVTDEYNHRIQKFDQAGAYLLTIGTYGKGQGELALPQGIAISPTDEVY 218
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSN 218
++D+ N+R+Q+F+ G+ FQ +GK G G Q P I + V+D+
Sbjct: 219 IADTFNNRIQVFNDKGK-FQRQ---IGK-GESGLGPCQFNFPRGINFDPLSGAFYVADTF 273
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
N+R+ FD R + + G L +P V D G V D+GNNRI ++
Sbjct: 274 NNRIMKFDQQDRFLYTVGLFPI----LIYPNQVLPDGGGKFYVTDTGNNRIVVYKDSVLS 329
Query: 279 LRAFGCWGSGDGEFKGLEG---VAVMSNGNILVCDRENHRI 316
G G+ G+ K G V + +GNI V D NHRI
Sbjct: 330 AVLDGSIGNSRGDKKQYAGPFDVEIDKSGNIFVADSFNHRI 370
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 89/172 (51%), Gaps = 5/172 (2%)
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
H + V+N +I S S IF V VF S T+ +G+ + P +A
Sbjct: 17 HTLFVTNLLSIICSFS-----LIFLVGSPVFASSFTYSEAWGNEADDPSMFRTPVAMAKD 71
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
T + V+D NHR+ + +G+V+ +FG G + G+ P GVA+D +G I V D+GN
Sbjct: 72 LTGNIYVADMGNHRIVKMNKSGKVLETFGGLGDKPGKFNMPFGVAIDKEGNILVADTGNY 131
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
RIQ F FL+++G G G+GEF +AV S N V D NHRIQ F
Sbjct: 132 RIQKFDHQFHFLKSWGTRGKGEGEFGFPRELAVDSKNNYYVTDEYNHRIQKF 183
>gi|157131678|ref|XP_001655921.1| hypothetical protein AaeL_AAEL012178 [Aedes aegypti]
gi|108871461|gb|EAT35686.1| AAEL012178-PA [Aedes aegypti]
Length = 792
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 144/285 (50%), Gaps = 34/285 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH--FDLKTNCVFLA---FTWP 100
G G E G + P GIAV D ++VAD N+RVQV +P F LK A F P
Sbjct: 498 GFDGHEDGQVSRPWGIAVDKDGHVLVADRRNNRVQVFYPDGTFKLKFGSKGTANGQFDLP 557
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
GI N I+V D NHRVQVF ++G F+ KFGS G GQ ++P +AV+ ++V
Sbjct: 558 AGICTDGQNRIIVVDKDNHRVQVFSANGLFLLKFGSYGKDCGQFQYPWDVAVNIKGEILV 617
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR--------- 211
+DS NHR+Q+F+ S+G F+ +F G + H Y+ T R
Sbjct: 618 TDSRNHRIQLFN-------SEGQFISRFSFDG-----VNHSRYLKGLTTPRGACFTPQGD 665
Query: 212 VIVSDSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
VI+SD NHR+ + D +V+ + G EG+ + P G+ DD G + V DS N R+
Sbjct: 666 VIISDFENHRLLLIDATLTKVLAAKGHEGTAVHEFSRPSGICCDDDGRVIVADSKNQRVL 725
Query: 271 IFTPDGQFLRAFGCWGS-------GDGEFKGLEGVAVMSNGNILV 308
IF+P +FL A S G E VA++ +G ++V
Sbjct: 726 IFSPQLEFLWAVEIRPSSNNLLTMGMDEKDRPSDVALLPDGRLVV 770
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 122/225 (54%), Gaps = 12/225 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GIAV D ++VAD N+RVQVF DGTF KFGS G GQ + P I NR+I
Sbjct: 510 PWGIAVDKDGHVLVADRRNNRVQVFYPDGTFKLKFGSKGTANGQFDLPAGICTDGQNRII 569
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D +NHRVQ+F N G F+ KFGS G GQ ++P +AV+ ++V+DS N
Sbjct: 570 VVDKDNHRVQVFSAN-------GLFLLKFGSYGKDCGQFQYPWDVAVNIKGEILVTDSRN 622
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQ----LKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
HR+Q+F+ G+ I+ F +G + L PRG QG + + D N+R+ +
Sbjct: 623 HRIQLFNSEGQFISRFSFDGVNHSRYLKGLTTPRGACFTPQGDVIISDFENHRLLLIDAT 682
Query: 276 -GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ L A G G+ EF G+ +G ++V D +N R+ +F
Sbjct: 683 LTKVLAAKGHEGTAVHEFSRPSGICCDDDGRVIVADSKNQRVLIF 727
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 106/190 (55%), Gaps = 11/190 (5%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G++ GQ+ P IAV V+V+D N+RVQ VF DGTF KFGS G
Sbjct: 497 FGFDGHEDGQVSRPWGIAVDKDGHVLVADRRNNRVQ-------VFYPDGTFKLKFGSKGT 549
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
GQ + P I NR+IV D +NHRVQ+F NG + FGS G + GQ ++P VAV
Sbjct: 550 ANGQFDLPAGICTDGQNRIIVVDKDNHRVQVFSANGLFLLKFGSYGKDCGQFQYPWDVAV 609
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF-KGL---EGVAVMSNGNILVC 309
+ +G I V DS N+RIQ+F +GQF+ F G + KGL G G++++
Sbjct: 610 NIKGEILVTDSRNHRIQLFNSEGQFISRFSFDGVNHSRYLKGLTTPRGACFTPQGDVIIS 669
Query: 310 DRENHRIQVF 319
D ENHR+ +
Sbjct: 670 DFENHRLLLI 679
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 90/205 (43%), Gaps = 37/205 (18%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
+ K GS+G+ G F P GI N I+V D NHRVQV N +FL
Sbjct: 540 FKLKFGSKGTANGQFDLPAGICTDGQNRIIVVDKDNHRVQV------FSANGLFLLKFGS 593
Query: 96 ------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
F +P +AV I+V DS NHR+Q+F S+G F+ +F G + H Y
Sbjct: 594 YGKDCGQFQYPWDVAVNIKGEILVTDSRNHRIQLFNSEGQFISRFSFDG-----VNHSRY 648
Query: 150 IAVSNTNR---------VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
+ T R VI+SD NHR+ + D + + G G +
Sbjct: 649 LKGLTTPRGACFTPQGDVIISDFENHRLLLIDA------TLTKVLAAKGHEGTAVHEFSR 702
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIF 225
P I + RVIV+DS N RV IF
Sbjct: 703 PSGICCDDDGRVIVADSKNQRVLIF 727
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%)
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
T+FG +G E+GQ+ P G+AVD G++ V D NNR+Q+F PDG F FG G+ +G+F
Sbjct: 495 TTFGFDGHEDGQVSRPWGIAVDKDGHVLVADRRNNRVQVFYPDGTFKLKFGSKGTANGQF 554
Query: 293 KGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ I+V D++NHR+QVF
Sbjct: 555 DLPAGICTDGQNRIIVVDKDNHRVQVF 581
>gi|319652355|ref|ZP_08006472.1| cell surface protein [Bacillus sp. 2_A_57_CT2]
gi|317396016|gb|EFV76737.1| cell surface protein [Bacillus sp. 2_A_57_CT2]
Length = 615
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 131/235 (55%), Gaps = 19/235 (8%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F PR IAV +++ VADS NHR+Q F + GTF+ +GS+G +G + P +AV +
Sbjct: 384 FFVPRQIAVDRYDNVYVADSVNHRIQKFSNSGTFLAAYGSLGTLSGFFQFPSGVAVDSKG 443
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ VSDS N+R+Q F+ S ++ ++G G G+ P +A+ + + V D
Sbjct: 444 NIFVSDSENNRIQKFN-------SFFVYMKEWGRKGTGNGEFSQPMQLAIDSKDNVYAVD 496
Query: 217 SNNHRVQIFDVNGRVITSFGSEG------------SEEGQLKFPRGVAVDDQGYISVGDS 264
N+RVQ FD NG+ IT +G+ G E G L P G+A+D+Q + V D+
Sbjct: 497 RINNRVQKFDNNGQFITKWGTNGGTGHLDPLENWGEEPGDLFLPTGIAIDEQNRVYVTDT 556
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NNR+ ++ +G+F+ FG + DG F +G+ + S+GNI+V D H+IQ F
Sbjct: 557 SNNRMNVYDENGRFIEQFGSFSGEDGHFFSPQGLDIDSSGNIIVADGLLHKIQFF 611
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 156/297 (52%), Gaps = 19/297 (6%)
Query: 37 QKRRLQFKIGSRGSEPGC----FTWPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LK 89
Q + KIG G EPG F PRGI P++ ++ VAD+ N+R+ + F D L
Sbjct: 214 QNGSFKRKIG--GLEPGLGSYQFYHPRGINFEPNSGALYVADTYNNRI-MKFDASDRFLY 270
Query: 90 TNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGK-----FGSMGNKAGQL 144
T +F +P + D + + D+ N+R++V++ G + G G+K Q
Sbjct: 271 TTGIFPNLVYPNQVLPDGDGDLFITDTGNNRIEVYKEIGLSISYKMTIGLGRYGDK--QY 328
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG--NKAGQLEHPH 202
P+ + + V VSDS NHR+ ++ NG + G+ G G G + AGQ P
Sbjct: 329 AGPYDVQSDSKGNVFVSDSFNHRILKYNTNGSLVSKWGSMYGTGGPFGYGSYAGQFFVPR 388
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
IAV + V V+DS NHR+Q F +G + ++GS G+ G +FP GVAVD +G I V
Sbjct: 389 QIAVDRYDNVYVADSVNHRIQKFSNSGTFLAAYGSLGTLSGFFQFPSGVAVDSKGNIFVS 448
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
DS NNRIQ F +++ +G G+G+GEF +A+ S N+ DR N+R+Q F
Sbjct: 449 DSENNRIQKFNSFFVYMKEWGRKGTGNGEFSQPMQLAIDSKDNVYAVDRINNRVQKF 505
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 140/281 (49%), Gaps = 18/281 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTW 99
GS G PG F P GIA+ + +I+VAD+ N+R+Q F + F +
Sbjct: 81 FGSLGHSPGEFNMPFGIAIDREGNILVADTGNYRIQKFDSQFKFIKSWGTKGEGNNQFGF 140
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PR IA+ N+ + D NHR+Q + S+G ++ GS G GQ+ P IA++N+ V
Sbjct: 141 PREIAIDQQNNYYITDEFNHRIQKYNSEGQYLLTIGSYGKGDGQMALPQGIAINNSGEVY 200
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSN 218
V+D+ N+R+Q+FD NG + G GS Q HP I N+ + V+D+
Sbjct: 201 VADTYNNRIQVFDQNGSFKRKIGGLEPGLGSY-----QFYHPRGINFEPNSGALYVADTY 255
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG-- 276
N+R+ FD + R + + G + L +P V D G + + D+GNNRI+++ G
Sbjct: 256 NNRIMKFDASDRFLYTTGIFPN----LVYPNQVLPDGDGDLFITDTGNNRIEVYKEIGLS 311
Query: 277 -QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+ G GD ++ G V S GN+ V D NHRI
Sbjct: 312 ISYKMTIGLGRYGDKQYAGPYDVQSDSKGNVFVSDSFNHRI 352
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 116/226 (51%), Gaps = 10/226 (4%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P +A ++ + D NHR+ S G +G FGS+G+ G+ P IA+
Sbjct: 44 FRTPVALAKDSSGNLYMEDMGNHRIVKMDSSGKILGAFGSLGHSPGEFNMPFGIAIDREG 103
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++V+D+ N+R+Q FD S F+ +G+ G Q P IA+ N ++D
Sbjct: 104 NILVADTGNYRIQKFD-------SQFKFIKSWGTKGEGNNQFGFPREIAIDQQNNYYITD 156
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
NHR+Q ++ G+ + + GS G +GQ+ P+G+A+++ G + V D+ NNRIQ+F +G
Sbjct: 157 EFNHRIQKYNSEGQYLLTIGSYGKGDGQMALPQGIAINNSGEVYVADTYNNRIQVFDQNG 216
Query: 277 QFLRAFGCW--GSGDGEFKGLEGVAVMSN-GNILVCDRENHRIQVF 319
F R G G G +F G+ N G + V D N+RI F
Sbjct: 217 SFKRKIGGLEPGLGSYQFYHPRGINFEPNSGALYVADTYNNRIMKF 262
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 109/195 (55%), Gaps = 7/195 (3%)
Query: 125 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTF 184
+S +F +G+ + A + P +A ++ + + D NHR+ D +G++
Sbjct: 25 ESSYSFQQAWGNETDPANKFRTPVALAKDSSGNLYMEDMGNHRIVKMDSSGKI------- 77
Query: 185 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQ 244
+G FGS+G+ G+ P IA+ ++V+D+ N+R+Q FD + I S+G++G Q
Sbjct: 78 LGAFGSLGHSPGEFNMPFGIAIDREGNILVADTGNYRIQKFDSQFKFIKSWGTKGEGNNQ 137
Query: 245 LKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNG 304
FPR +A+D Q + D N+RIQ + +GQ+L G +G GDG+ +G+A+ ++G
Sbjct: 138 FGFPREIAIDQQNNYYITDEFNHRIQKYNSEGQYLLTIGSYGKGDGQMALPQGIAINNSG 197
Query: 305 NILVCDRENHRIQVF 319
+ V D N+RIQVF
Sbjct: 198 EVYVADTYNNRIQVF 212
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 17/90 (18%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----------F 97
G EPG P GIA+ N + V D+SN+R+ V N F+ F
Sbjct: 531 GEEPGDLFLPTGIAIDEQNRVYVTDTSNNRMNVY------DENGRFIEQFGSFSGEDGHF 584
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSD 127
P+G+ + +I+VAD H++Q F+ +
Sbjct: 585 FSPQGLDIDSSGNIIVADGLLHKIQFFRKE 614
>gi|170032165|ref|XP_001843953.1| dappled [Culex quinquefasciatus]
gi|167871902|gb|EDS35285.1| dappled [Culex quinquefasciatus]
Length = 785
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 132/251 (52%), Gaps = 27/251 (10%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH--FDLKTNCVFLA---FTWP 100
G G E G + P GIAV + ++VAD N+RVQV +P F LK A F P
Sbjct: 491 GFDGHEDGQVSRPWGIAVDKEGHVLVADRRNNRVQVFYPDGSFKLKFGSKGTANGQFDLP 550
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
GI N I+V D NHRVQVF +G F+ KFGS G GQ ++P +AV+ ++V
Sbjct: 551 AGICTDAQNRIIVVDKDNHRVQVFSPNGIFLLKFGSYGKDCGQFQYPWDVAVNVKGEILV 610
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR--------- 211
+DS NHR+Q+F+ S+G F+ +F G + H Y+ T R
Sbjct: 611 TDSRNHRIQLFN-------SEGQFISRFSFDG-----VNHSRYLKGLTTPRGACFTPQGD 658
Query: 212 VIVSDSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
VI+SD NHR+ + D +V+ + G EGS + P G+A DD G + V DS N R+
Sbjct: 659 VIISDFENHRLLLIDSTLTKVLAAKGHEGSAVHEFSRPSGIACDDDGRVIVADSKNQRVL 718
Query: 271 IFTPDGQFLRA 281
IF+P +FL A
Sbjct: 719 IFSPQLEFLWA 729
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 123/225 (54%), Gaps = 12/225 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GIAV + ++VAD N+RVQVF DG+F KFGS G GQ + P I NR+I
Sbjct: 503 PWGIAVDKEGHVLVADRRNNRVQVFYPDGSFKLKFGSKGTANGQFDLPAGICTDAQNRII 562
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D +NHRVQ+F NG F+ KFGS G GQ ++P +AV+ ++V+DS N
Sbjct: 563 VVDKDNHRVQVFSPNG-------IFLLKFGSYGKDCGQFQYPWDVAVNVKGEILVTDSRN 615
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQ----LKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
HR+Q+F+ G+ I+ F +G + L PRG QG + + D N+R+ +
Sbjct: 616 HRIQLFNSEGQFISRFSFDGVNHSRYLKGLTTPRGACFTPQGDVIISDFENHRLLLIDST 675
Query: 276 -GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ L A G GS EF G+A +G ++V D +N R+ +F
Sbjct: 676 LTKVLAAKGHEGSAVHEFSRPSGIACDDDGRVIVADSKNQRVLIF 720
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 106/190 (55%), Gaps = 11/190 (5%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G++ GQ+ P IAV V+V+D N+RVQ VF DG+F KFGS G
Sbjct: 490 FGFDGHEDGQVSRPWGIAVDKEGHVLVADRRNNRVQ-------VFYPDGSFKLKFGSKGT 542
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
GQ + P I NR+IV D +NHRVQ+F NG + FGS G + GQ ++P VAV
Sbjct: 543 ANGQFDLPAGICTDAQNRIIVVDKDNHRVQVFSPNGIFLLKFGSYGKDCGQFQYPWDVAV 602
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF-KGL---EGVAVMSNGNILVC 309
+ +G I V DS N+RIQ+F +GQF+ F G + KGL G G++++
Sbjct: 603 NVKGEILVTDSRNHRIQLFNSEGQFISRFSFDGVNHSRYLKGLTTPRGACFTPQGDVIIS 662
Query: 310 DRENHRIQVF 319
D ENHR+ +
Sbjct: 663 DFENHRLLLI 672
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 93/205 (45%), Gaps = 37/205 (18%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
+ K GS+G+ G F P GI N I+V D NHRVQV P N +FL
Sbjct: 533 FKLKFGSKGTANGQFDLPAGICTDAQNRIIVVDKDNHRVQVFSP------NGIFLLKFGS 586
Query: 96 ------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
F +P +AV I+V DS NHR+Q+F S+G F+ +F G + H Y
Sbjct: 587 YGKDCGQFQYPWDVAVNVKGEILVTDSRNHRIQLFNSEGQFISRFSFDG-----VNHSRY 641
Query: 150 IAVSNTNR---------VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
+ T R VI+SD NHR+ + D + + G G+ +
Sbjct: 642 LKGLTTPRGACFTPQGDVIISDFENHRLLLID------STLTKVLAAKGHEGSAVHEFSR 695
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIF 225
P IA + RVIV+DS N RV IF
Sbjct: 696 PSGIACDDDGRVIVADSKNQRVLIF 720
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 58/87 (66%)
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
T+FG +G E+GQ+ P G+AVD +G++ V D NNR+Q+F PDG F FG G+ +G+F
Sbjct: 488 TTFGFDGHEDGQVSRPWGIAVDKEGHVLVADRRNNRVQVFYPDGSFKLKFGSKGTANGQF 547
Query: 293 KGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + I+V D++NHR+QVF
Sbjct: 548 DLPAGICTDAQNRIIVVDKDNHRVQVF 574
>gi|228985056|ref|ZP_04145224.1| Cell surface protein [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228774744|gb|EEM23142.1| Cell surface protein [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 598
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 151/282 (53%), Gaps = 9/282 (3%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWPRG 102
GS G P F PRGI + S+ VAD+ N+R+ + F + D L T F F +P
Sbjct: 208 GSAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRI-MKFTNKDQFLYTVGNFFQFVYPNQ 266
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG---QLEHPHYIAVSNTNRVI 159
+ + +I + D+ N+RV ++ G ++GN+ Q P+ + V
Sbjct: 267 VLPDGNGNIYITDTGNNRVLLYNEVGLTAVMKKTLGNERNGNTQYAGPYDVERDTNGNVF 326
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG--NKAGQLEHPHYIAVSNTNRVIVSDS 217
VSDS NHR+ +D++G+V G+ G G +G + GQ P IA N V VSDS
Sbjct: 327 VSDSFNHRILKYDISGKVVGKWGSLFGAGGPLGYGSLPGQFYVPRQIATDRYNNVYVSDS 386
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NHR+Q F+ +G V+ S+GS G G +FP G+A+D +G I + DS N+RIQ P
Sbjct: 387 VNHRIQKFNNSGIVLASYGSFGVLPGFFQFPSGIAIDSKGNIFIADSENHRIQKLNPFFV 446
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+++ +G GSG+GEF +A+ S N+ V DR N+R+Q F
Sbjct: 447 YMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVDRINNRVQKF 488
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 143/281 (50%), Gaps = 18/281 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTW 99
IG+ G PG F P GIAV + +I+VAD++N+R+Q F + F++
Sbjct: 64 IGTLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSF 123
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PR IAV DN+ + D NHR+Q + DG ++ GS G G++ P IA++ + V
Sbjct: 124 PREIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVY 183
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSN 218
++D+ N+R+Q+FD G + GT GS G Q HP I +T+ + V+D+
Sbjct: 184 IADTYNNRIQVFDKKGEFQRVIGT-----GSAGLGPYQFYHPRGINFDSTSGSLYVADTY 238
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ- 277
N+R+ F + + + G+ Q +P V D G I + D+GNNR+ ++ G
Sbjct: 239 NNRIMKFTNKDQFLYTVGN----FFQFVYPNQVLPDGNGNIYITDTGNNRVLLYNEVGLT 294
Query: 278 --FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+ G +G+ ++ G V +NGN+ V D NHRI
Sbjct: 295 AVMKKTLGNERNGNTQYAGPYDVERDTNGNVFVSDSFNHRI 335
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 141/295 (47%), Gaps = 41/295 (13%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL------KTNCVFLA------------ 96
+ P + + ++ V+DS NHR+ +D+ K +F A
Sbjct: 311 YAGPYDVERDTNGNVFVSDSFNHRIL----KYDISGKVVGKWGSLFGAGGPLGYGSLPGQ 366
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F PR IA N++ V+DS NHR+Q F + G + +GS G G + P IA+ +
Sbjct: 367 FYVPRQIATDRYNNVYVSDSVNHRIQKFNNSGIVLASYGSFGVLPGFFQFPSGIAIDSKG 426
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ ++DS NHR+Q + F ++ ++G G+ G+ P +A+ + + V V D
Sbjct: 427 NIFIADSENHRIQKLN---PFF----VYMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVD 479
Query: 217 SNNHRVQIFDVNGRVITSFGS----------EGSEEG--QLKFPRGVAVDDQGYISVGDS 264
N+RVQ FD G IT +G+ E EG L P G+ +D + V D+
Sbjct: 480 RINNRVQKFDNEGNFITKWGTNHGAGNLDPLENWREGPGDLFLPIGIEIDINNTVYVTDT 539
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NNR+ I+ +G FL +FG + G+F +G+ V S GNI++ D RIQ F
Sbjct: 540 SNNRVNIYNENGDFLESFGSFNGMSGQFFSPQGIDVDSQGNIIITDGLLQRIQFF 594
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A + V D N+R+ +G V G++G GQ P IAV ++
Sbjct: 30 PVAMARDAKGFLYVVDMGNNRILKIDKNGEVVDAIGTLGEGPGQFNMPFGIAVDKEGNIL 89
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ N+R+Q F+ FQ F+ +G+ G + Q P IAV + N ++D N
Sbjct: 90 VADTANYRIQKFN---EEFQ----FIKSWGTKGKGSEQFSFPREIAVDSDNNYYITDEYN 142
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HR+Q + +G+ I + GS G G++ P+G+A++ Q + + D+ NNRIQ+F G+F
Sbjct: 143 HRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVYIADTYNNRIQVFDKKGEFQ 202
Query: 280 RAFGCWGSGDGEFKGLEGVAV---MSNGNILVCDRENHRIQVF 319
R G +G G ++ + ++G++ V D N+RI F
Sbjct: 203 RVIGTGSAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRIMKF 245
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 135/297 (45%), Gaps = 42/297 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-----------LAFTWPRGI 103
F +P + + +I + D+ N+RV + + ++ V + P +
Sbjct: 261 FVYPNQVLPDGNGNIYITDTGNNRVLL---YNEVGLTAVMKKTLGNERNGNTQYAGPYDV 317
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM---------GNKAGQLEHPHYIAVSN 154
+ ++ V+DS NHR+ + G VGK+GS+ G+ GQ P IA
Sbjct: 318 ERDTNGNVFVSDSFNHRILKYDISGKVVGKWGSLFGAGGPLGYGSLPGQFYVPRQIATDR 377
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
N V VSDS NHR+Q F+ +G V S +GS G G + P IA+ + + +
Sbjct: 378 YNNVYVSDSVNHRIQKFNNSGIVLAS-------YGSFGVLPGFFQFPSGIAIDSKGNIFI 430
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+DS NHR+Q + + +G +GS EG+ P +A+D + + V D NNR+Q F
Sbjct: 431 ADSENHRIQKLNPFFVYMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVDRINNRVQKFDN 490
Query: 275 DGQFLRAFGC------------WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G F+ +G W G G+ G+ + N + V D N+R+ ++
Sbjct: 491 EGNFITKWGTNHGAGNLDPLENWREGPGDLFLPIGIEIDINNTVYVTDTSNNRVNIY 547
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+V +GS + + L P +A + V D N+R+ D NG V V G
Sbjct: 13 YVKSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRILKIDKNGEV-------VDAIG 65
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
++G GQ P IAV ++V+D+ N+R+Q F+ + I S+G++G Q FPR
Sbjct: 66 TLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSFPR 125
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+AVD + D N+RIQ ++PDGQ+++ G +G +GE +G+A+ + +
Sbjct: 126 EIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVYIA 185
Query: 310 DRENHRIQVF 319
D N+RIQVF
Sbjct: 186 DTYNNRIQVF 195
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+ + S+GSE L+ P +A D +G++ V D GNNRI +G+ + A G G G
Sbjct: 12 KYVKSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRILKIDKNGEVVDAIGTLGEGP 71
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F G+AV GNILV D N+RIQ F
Sbjct: 72 GQFNMPFGIAVDKEGNILVADTANYRIQKF 101
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 52 PGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL-----KTNCVFLAFTWPRGIAVG 106
PG P GI + +N++ V D+SN+RV + + D N + F P+GI V
Sbjct: 517 PGDLFLPIGIEIDINNTVYVTDTSNNRVNIYNENGDFLESFGSFNGMSGQFFSPQGIDVD 576
Query: 107 PDNSIVVADSSNHRVQVFQS 126
+I++ D R+Q F+
Sbjct: 577 SQGNIIITDGLLQRIQFFKK 596
>gi|402593910|gb|EJW87837.1| B-box zinc finger family protein [Wuchereria bancrofti]
Length = 956
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 124/226 (54%), Gaps = 14/226 (6%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P GI I+VAD SN+RVQ+F +G F+ KFGS G + GQ + P IA N
Sbjct: 647 FCRPWGICCDNKGRILVADRSNNRVQIFDKEGNFLYKFGSPGTRPGQFDRPAGIA----N 702
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++V+D +NHRVQ VF G F+ KFG G G +P +AV++ N++ VSD
Sbjct: 703 EIVVADKDNHRVQ-------VFSERGDFLLKFGERGRTPGLFNYPWGVAVNSFNQIAVSD 755
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKF--PRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ NHRVQ+F G I FG + S F PRGV G + + D N+R+ + +
Sbjct: 756 TRNHRVQMFSPQGHFIRKFGFDSSLYNYKNFDSPRGVCYLHDGQLVITDFNNHRLVMMSS 815
Query: 275 DGQF-LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G ++ +G G G+G F +G+ + G+ILVCD N+RIQV
Sbjct: 816 RGTVDMKMYGGEGDGEGSFCRPQGITTDNEGHILVCDSRNNRIQVL 861
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 137/260 (52%), Gaps = 30/260 (11%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------- 95
F GS GS G F P GI I+VAD SN+RVQ+ FD + N ++
Sbjct: 635 FSFGSEGSADGQFCRPWGICCDNKGRILVADRSNNRVQI----FDKEGNFLYKFGSPGTR 690
Query: 96 --AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F P GIA N IVVAD NHRVQVF G F+ KFG G G +P +AV+
Sbjct: 691 PGQFDRPAGIA----NEIVVADKDNHRVQVFSERGDFLLKFGERGRTPGLFNYPWGVAVN 746
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG---SMGNKAGQLEHPHYIAVSNTN 210
+ N++ VSD+ NHRVQ+F G F+ KFG S+ N + P + +
Sbjct: 747 SFNQIAVSDTRNHRVQMFSPQGH-------FIRKFGFDSSLYNYKN-FDSPRGVCYLHDG 798
Query: 211 RVIVSDSNNHRVQIFDVNGRV-ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
+++++D NNHR+ + G V + +G EG EG P+G+ D++G+I V DS NNRI
Sbjct: 799 QLVITDFNNHRLVMMSSRGTVDMKMYGGEGDGEGSFCRPQGITTDNEGHILVCDSRNNRI 858
Query: 270 QIFTPDG-QFLRAFGCWGSG 288
Q+ DG Q + +FG G G
Sbjct: 859 QVLNLDGMQCVASFGGAGLG 878
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 106/186 (56%), Gaps = 15/186 (8%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FGS G+ GQ P I N R++V+D +N+RVQIFD +G F+ KFGS G
Sbjct: 637 FGSEGSADGQFCRPWGICCDNKGRILVADRSNNRVQIFD-------KEGNFLYKFGSPGT 689
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
+ GQ + P IA N ++V+D +NHRVQ+F G + FG G G +P GVAV
Sbjct: 690 RPGQFDRPAGIA----NEIVVADKDNHRVQVFSERGDFLLKFGERGRTPGLFNYPWGVAV 745
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE---GVAVMSNGNILVCD 310
+ I+V D+ N+R+Q+F+P G F+R FG + S +K + GV + +G +++ D
Sbjct: 746 NSFNQIAVSDTRNHRVQMFSPQGHFIRKFG-FDSSLYNYKNFDSPRGVCYLHDGQLVITD 804
Query: 311 RENHRI 316
NHR+
Sbjct: 805 FNNHRL 810
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 73/132 (55%), Gaps = 4/132 (3%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FGS G+ GQ P I N R++V+D +N+RVQIFD G + FGS G+ GQ
Sbjct: 637 FGSEGSADGQFCRPWGICCDNKGRILVADRSNNRVQIFDKEGNFLYKFGSPGTRPGQFDR 696
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+A + I V D N+R+Q+F+ G FL FG G G F GVAV S I
Sbjct: 697 PAGIANE----IVVADKDNHRVQVFSERGDFLLKFGERGRTPGLFNYPWGVAVNSFNQIA 752
Query: 308 VCDRENHRIQVF 319
V D NHR+Q+F
Sbjct: 753 VSDTRNHRVQMF 764
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 66/173 (38%), Gaps = 36/173 (20%)
Query: 181 DGTFVGKFGSMGN-KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
D TF+ K S+G ++G +I R I VQ D G TS +
Sbjct: 504 DSTFISKLRSLGELESGACARTTHIIGEGYKRAIRDRLCTILVQTRDACGDACTSTSHQL 563
Query: 240 SEEGQLKFPRGVAVD------DQGYISVG----DSGNNRIQIF--------TPDGQFLR- 280
S L P G VD D G S+ D GN+ + I P + R
Sbjct: 564 S--ASLLSPEGRTVDIRIEEQDGGIYSLAYFPTDEGNHFLDIKIRGVSICGCPTVIYARK 621
Query: 281 --------------AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+FG GS DG+F G+ + G ILV DR N+R+Q+F
Sbjct: 622 GRNYGIIARTGPLFSFGSEGSADGQFCRPWGICCDNKGRILVADRSNNRVQIF 674
>gi|320160708|ref|YP_004173932.1| hypothetical protein ANT_12980 [Anaerolinea thermophila UNI-1]
gi|319994561|dbj|BAJ63332.1| hypothetical membrane protein [Anaerolinea thermophila UNI-1]
Length = 1155
Score = 148 bits (374), Expect = 3e-33, Method: Composition-based stats.
Identities = 101/300 (33%), Positives = 145/300 (48%), Gaps = 38/300 (12%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHF--------------DL-K 89
IG+ G PG PRG+A+ PD ++ VADS NHR+Q HF DL +
Sbjct: 866 IGTSGINPGELQAPRGMAIAPDGTLYVADSRNHRIQ----HFAADGTLLHQWGTFADLVQ 921
Query: 90 TNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGN--KAGQLEHP 147
+ F P +AVG D ++ V D+ NHRVQ F DGTF+ +G G P
Sbjct: 922 GDAPGGTFNEPWDVAVGLDGTVFVTDTWNHRVQAFTPDGTFLRMWGYFGQAETPDAFWGP 981
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
+A+ RV V+D+ N RV IF+ N GTFV +FG+ G GQ + P IA+
Sbjct: 982 RGLAIDQRGRVYVTDTGNKRVAIFEPN-------GTFVAQFGTAGLDVGQFDEPVGIAID 1034
Query: 208 NTNRVIVSDSNNHRVQIF--DVNGRVITSF------GSEGSEEGQLKFPRGVAVDDQGYI 259
V ++D+ N RVQ+F D +G V T G G F + V+ G++
Sbjct: 1035 QDGLVYIADTWNQRVQVFVPDTSGTVFTPIRQWEIAGWYGQSLENKPFLKISPVN--GHV 1092
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V D R+ F DG F+R +G + + F G+A+ ++G + V D N+R+ F
Sbjct: 1093 FVTDPEGYRVLEFNADGTFVRGWGYYSTNYDGFGLASGLAIDTDGKVWVSDGANNRLLRF 1152
Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 27/243 (11%)
Query: 48 RGSEPG-CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----------- 95
+G PG F P +AVG D ++ V D+ NHRVQ P + FL
Sbjct: 921 QGDAPGGTFNEPWDVAVGLDGTVFVTDTWNHRVQAFTP------DGTFLRMWGYFGQAET 974
Query: 96 --AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
AF PRG+A+ + V D+ N RV +F+ +GTFV +FG+ G GQ + P IA+
Sbjct: 975 PDAFWGPRGLAIDQRGRVYVTDTGNKRVAIFEPNGTFVAQFGTAGLDVGQFDEPVGIAID 1034
Query: 154 NTNRVIVSDSNNHRVQIF--DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN- 210
V ++D+ N RVQ+F D +G VF T + ++ G LE+ ++ +S N
Sbjct: 1035 QDGLVYIADTWNQRVQVFVPDTSGTVF----TPIRQWEIAGWYGQSLENKPFLKISPVNG 1090
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
V V+D +RV F+ +G + +G + G+A+D G + V D NNR+
Sbjct: 1091 HVFVTDPEGYRVLEFNADGTFVRGWGYYSTNYDGFGLASGLAIDTDGKVWVSDGANNRLL 1150
Query: 271 IFT 273
FT
Sbjct: 1151 RFT 1153
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 17/142 (11%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF-TWPRG 102
+ G+ G + G F P GIA+ D + +AD+ N RVQV P + VF W
Sbjct: 1014 QFGTAGLDVGQFDEPVGIAIDQDGLVYIADTWNQRVQVFVPD---TSGTVFTPIRQWEIA 1070
Query: 103 ------------IAVGPDNS-IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
+ + P N + V D +RV F +DGTFV +G
Sbjct: 1071 GWYGQSLENKPFLKISPVNGHVFVTDPEGYRVLEFNADGTFVRGWGYYSTNYDGFGLASG 1130
Query: 150 IAVSNTNRVIVSDSNNHRVQIF 171
+A+ +V VSD N+R+ F
Sbjct: 1131 LAIDTDGKVWVSDGANNRLLRF 1152
>gi|260818154|ref|XP_002603949.1| hypothetical protein BRAFLDRAFT_242376 [Branchiostoma floridae]
gi|229289274|gb|EEN59960.1| hypothetical protein BRAFLDRAFT_242376 [Branchiostoma floridae]
Length = 283
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 132/264 (50%), Gaps = 42/264 (15%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTF-VGKFGSMGNKAGQLEHPHYIAVSNT 155
F P G+ V + I VAD N R+QVF G F + KFGS G+ GQL+ PH I
Sbjct: 21 FLGPFGVTVSDEGEIFVADRGNLRIQVFTLQGKFFLFKFGSYGSGEGQLDRPHGICTDRA 80
Query: 156 NRVIVSDSNNHRVQIFDVNGR--------------------------------------- 176
+IV+D NHRV++FD NG+
Sbjct: 81 GNIIVADGGNHRVEMFDKNGKFLKHITAGMNNKPWAVPWNISVDEEGNILVSDWIKHCIF 140
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
V+ DG F+ +FG G GQL+HPH I +IV+D N R+ + + + +T FG
Sbjct: 141 VYNEDGQFLFQFGGEGKVQGQLKHPHGICTDRAGNIIVADWGNRRLVVANPKFQRVT-FG 199
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSG-NNRIQIFTPDGQFLRAFGCWGSGDGEFKGL 295
+GS +GQ + PRGVAV D+G I + S NR+ ++ DG+FL FG G G+G+
Sbjct: 200 GKGSGKGQFRCPRGVAVSDEGEIFILASDVYNRVHVYNEDGEFLFQFGSRGCGEGQLYSP 259
Query: 296 EGVAVMSNGNILVCDRENHRIQVF 319
G+ GNI+V D N+R+++F
Sbjct: 260 RGICTDRAGNIIVADWGNNRVEMF 283
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 121/244 (49%), Gaps = 17/244 (6%)
Query: 36 LQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC------FPHFDLK 89
LQ + FK GS GS G P GI +I+VAD NHRV++ H
Sbjct: 50 LQGKFFLFKFGSYGSGEGQLDRPHGICTDRAGNIIVADGGNHRVEMFDKNGKFLKHITAG 109
Query: 90 TNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
N A W I+V + +I+V+D H + V+ DG F+ +FG G GQL+HPH
Sbjct: 110 MNNKPWAVPW--NISVDEEGNILVSDWIKHCIFVYNEDGQFLFQFGGEGKVQGQLKHPHG 167
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
I +IV+D N R+ + + FQ FG G+ GQ P +AVS+
Sbjct: 168 ICTDRAGNIIVADWGNRRLVVANPK---FQRV-----TFGGKGSGKGQFRCPRGVAVSDE 219
Query: 210 NRVIVSDSNNH-RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
+ + S+ + RV +++ +G + FGS G EGQL PRG+ D G I V D GNNR
Sbjct: 220 GEIFILASDVYNRVHVYNEDGEFLFQFGSRGCGEGQLYSPRGICTDRAGNIIVADWGNNR 279
Query: 269 IQIF 272
+++F
Sbjct: 280 VEMF 283
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 97/185 (52%), Gaps = 7/185 (3%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG +G+ GQ P + VS+ + V+D N R+Q+F + G+ F + KFGS G+
Sbjct: 11 FGGVGSGEGQFLGPFGVTVSDEGEIFVADRGNLRIQVFTLQGKFF------LFKFGSYGS 64
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
GQL+ PH I +IV+D NHRV++FD NG+ + + G P ++V
Sbjct: 65 GEGQLDRPHGICTDRAGNIIVADGGNHRVEMFDKNGKFLKHI-TAGMNNKPWAVPWNISV 123
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
D++G I V D + I ++ DGQFL FG G G+ K G+ GNI+V D N
Sbjct: 124 DEEGNILVSDWIKHCIFVYNEDGQFLFQFGGEGKVQGQLKHPHGICTDRAGNIIVADWGN 183
Query: 314 HRIQV 318
R+ V
Sbjct: 184 RRLVV 188
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ-FLRAFGCWGSGDGE 291
+FG GS EGQ P GV V D+G I V D GN RIQ+FT G+ FL FG +GSG+G+
Sbjct: 9 VTFGGVGSGEGQFLGPFGVTVSDEGEIFVADRGNLRIQVFTLQGKFFLFKFGSYGSGEGQ 68
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ GNI+V D NHR+++F
Sbjct: 69 LDRPHGICTDRAGNIIVADGGNHRVEMF 96
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 67/142 (47%), Gaps = 5/142 (3%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT---- 90
Y + + F+ G G G P GI +I+VAD N R+ V P F T
Sbjct: 142 YNEDGQFLFQFGGEGKVQGQLKHPHGICTDRAGNIIVADWGNRRLVVANPKFQRVTFGGK 201
Query: 91 NCVFLAFTWPRGIAVGPDNSI-VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
F PRG+AV + I ++A +RV V+ DG F+ +FGS G GQL P
Sbjct: 202 GSGKGQFRCPRGVAVSDEGEIFILASDVYNRVHVYNEDGEFLFQFGSRGCGEGQLYSPRG 261
Query: 150 IAVSNTNRVIVSDSNNHRVQIF 171
I +IV+D N+RV++F
Sbjct: 262 ICTDRAGNIIVADWGNNRVEMF 283
>gi|219852663|ref|YP_002467095.1| NHL repeat containing protein [Methanosphaerula palustris E1-9c]
gi|219546922|gb|ACL17372.1| NHL repeat containing protein [Methanosphaerula palustris E1-9c]
Length = 522
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 145/299 (48%), Gaps = 20/299 (6%)
Query: 30 TPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRV----QVCFPH 85
T YL R G+ G F P GIAV ++ VAD +N R+ + P
Sbjct: 21 TATETYLSSRLW----GTPGFGINQFNSPEGIAVDGTGNVYVADMNNDRISFFTKASLPQ 76
Query: 86 FDLKTNCVFLA---FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
+ F +P G+AV ++ VAD+ NH++Q F +G F ++G G+
Sbjct: 77 MPSSIGRIGSGHGQFFYPHGVAVDSTGNVYVADTGNHQIQKFTVNGNFNTQWGIKGSGTN 136
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
Q P IAV V V+D+ N+R++ F S G V +GS G++ GQ P
Sbjct: 137 QFNSPEGIAVDGAGNVYVADTGNNRIE-------KFTSSGDIVTSWGSYGSEVGQFNRPT 189
Query: 203 YIAVSNTN--RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
+AV NT + V+D+ N+R+Q F + G ++ + S Q P VAVD G +
Sbjct: 190 SVAVDNTGIGYIYVADTGNNRIQKFTLTGDLVATRSISNSGASQFNRPTSVAVDTGGSVY 249
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V D+GNNRIQ FT G + ++G +GS G+F G+ V G + V D N+RIQ F
Sbjct: 250 VADTGNNRIQKFTSSGDLITSWGSYGSESGQFVSPCGITVDGEGTVYVADTGNNRIQRF 308
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 132/243 (54%), Gaps = 16/243 (6%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--- 96
++ IG GS G F +P G+AV ++ VAD+ NH++Q + + T
Sbjct: 76 QMPSSIGRIGSGHGQFFYPHGVAVDSTGNVYVADTGNHQIQKFTVNGNFNTQWGIKGSGT 135
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F P GIAV ++ VAD+ N+R++ F S G V +GS G++ GQ P +AV N
Sbjct: 136 NQFNSPEGIAVDGAGNVYVADTGNNRIEKFTSSGDIVTSWGSYGSEVGQFNRPTSVAVDN 195
Query: 155 TN--RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK-AGQLEHPHYIAVSNTNR 211
T + V+D+ N+R+Q F + G + + S+ N A Q P +AV
Sbjct: 196 TGIGYIYVADTGNNRIQKFTLTGDLVATR--------SISNSGASQFNRPTSVAVDTGGS 247
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
V V+D+ N+R+Q F +G +ITS+GS GSE GQ P G+ VD +G + V D+GNNRIQ
Sbjct: 248 VYVADTGNNRIQKFTSSGDLITSWGSYGSESGQFVSPCGITVDGEGTVYVADTGNNRIQR 307
Query: 272 FTP 274
FTP
Sbjct: 308 FTP 310
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 105/203 (51%), Gaps = 9/203 (4%)
Query: 121 VQVFQSDGTFVGK--FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVF 178
VQ + T++ +G+ G Q P IAV T V V+D NN R+ F
Sbjct: 17 VQAVTATETYLSSRLWGTPGFGINQFNSPEGIAVDGTGNVYVADMNNDRISFF-----TK 71
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSE 238
S G +G+ GQ +PH +AV +T V V+D+ NH++Q F VNG T +G +
Sbjct: 72 ASLPQMPSSIGRIGSGHGQFFYPHGVAVDSTGNVYVADTGNHQIQKFTVNGNFNTQWGIK 131
Query: 239 GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGV 298
GS Q P G+AVD G + V D+GNNRI+ FT G + ++G +GS G+F V
Sbjct: 132 GSGTNQFNSPEGIAVDGAGNVYVADTGNNRIEKFTSSGDIVTSWGSYGSEVGQFNRPTSV 191
Query: 299 AVMSN--GNILVCDRENHRIQVF 319
AV + G I V D N+RIQ F
Sbjct: 192 AVDNTGIGYIYVADTGNNRIQKF 214
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWPRGIAVGPDN 109
F P +AV S+ VAD+ N+R+Q DL T+ F P GI V +
Sbjct: 234 FNRPTSVAVDTGGSVYVADTGNNRIQKFTSSGDLITSWGSYGSESGQFVSPCGITVDGEG 293
Query: 110 SIVVADSSNHRVQVFQSDGTF 130
++ VAD+ N+R+Q F T+
Sbjct: 294 TVYVADTGNNRIQRFTPVQTY 314
>gi|47568330|ref|ZP_00239032.1| cell surface protein [Bacillus cereus G9241]
gi|47555023|gb|EAL13372.1| cell surface protein [Bacillus cereus G9241]
Length = 617
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 149/282 (52%), Gaps = 9/282 (3%)
Query: 46 GSRGSEPGCFTWPRGIAV-GPDNSIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWPRG 102
GS G P F PRGI S+ VAD+ N+R+ + F + D L T F F +P
Sbjct: 227 GSAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRI-MKFTNKDQFLYTVGNFFQFVYPNQ 285
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG---QLEHPHYIAVSNTNRVI 159
+ +I + D+ N+RV ++ G ++GN+ Q P+ + V
Sbjct: 286 VLPDGKGNIYITDTGNNRVLLYNEVGLTAVMKKTLGNERNGNTQYAGPYDVERDTNGNVF 345
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG--NKAGQLEHPHYIAVSNTNRVIVSDS 217
VSDS NHR+ +D++G+V G+ G G +G + GQ P IA N V VSDS
Sbjct: 346 VSDSFNHRILKYDISGKVVGKWGSLFGAGGPLGYGSLPGQFYVPRQIATDRYNNVYVSDS 405
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NHR+Q F+ +G V+ S+GS G G +FP G+A+D +G I + DS N+RIQ P
Sbjct: 406 VNHRIQKFNNSGIVLASYGSFGVLPGFFQFPSGIAIDSKGNIFIADSENHRIQKLNPFFV 465
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+++ +G GSG+GEF +A+ S N+ V DR N+R+Q F
Sbjct: 466 YMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVDRINNRVQKF 507
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 144/281 (51%), Gaps = 18/281 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTW 99
IG+ G PG F P GIAV + +I+VAD++N+R+Q F + F++
Sbjct: 83 IGTLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSF 142
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PR IAV DN+ + D NHR+Q + DG ++ GS G G++ P IA++ + V
Sbjct: 143 PREIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVY 202
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSN 218
++D+ N+R+Q+FD G + GT GS G Q HP I +T+ + V+D+
Sbjct: 203 IADTYNNRIQVFDKKGEFQRVIGT-----GSAGLGPYQFYHPRGINFDSTSGSLYVADTY 257
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ- 277
N+R+ F + + + G+ Q +P V D +G I + D+GNNR+ ++ G
Sbjct: 258 NNRIMKFTNKDQFLYTVGN----FFQFVYPNQVLPDGKGNIYITDTGNNRVLLYNEVGLT 313
Query: 278 --FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+ G +G+ ++ G V +NGN+ V D NHRI
Sbjct: 314 AVMKKTLGNERNGNTQYAGPYDVERDTNGNVFVSDSFNHRI 354
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 141/295 (47%), Gaps = 41/295 (13%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL------KTNCVFLA------------ 96
+ P + + ++ V+DS NHR+ +D+ K +F A
Sbjct: 330 YAGPYDVERDTNGNVFVSDSFNHRIL----KYDISGKVVGKWGSLFGAGGPLGYGSLPGQ 385
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F PR IA N++ V+DS NHR+Q F + G + +GS G G + P IA+ +
Sbjct: 386 FYVPRQIATDRYNNVYVSDSVNHRIQKFNNSGIVLASYGSFGVLPGFFQFPSGIAIDSKG 445
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ ++DS NHR+Q + F ++ ++G G+ G+ P +A+ + + V V D
Sbjct: 446 NIFIADSENHRIQKLN---PFF----VYMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVD 498
Query: 217 SNNHRVQIFDVNGRVITSFGS----------EGSEEG--QLKFPRGVAVDDQGYISVGDS 264
N+RVQ FD G IT +G+ E EG L P G+ +D + V D+
Sbjct: 499 RINNRVQKFDNEGNFITKWGTNHGAGNLDPLENWREGPGDLFLPIGIEIDINNTVYVTDT 558
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NNR+ I+ +G FL +FG + G+F +G+ V S GNI++ D RIQ F
Sbjct: 559 SNNRVNIYNENGDFLESFGSFNGMSGQFFSPQGIDVDSQGNIIITDGLLQRIQFF 613
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A + V D N+R+ +G V G++G GQ P IAV ++
Sbjct: 49 PVAMARDAKGFLYVVDMGNNRILKIDKNGEVVDAIGTLGEGPGQFNMPFGIAVDKEGNIL 108
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ N+R+Q F+ FQ F+ +G+ G + Q P IAV + N ++D N
Sbjct: 109 VADTANYRIQKFN---EEFQ----FIKSWGTKGKGSEQFSFPREIAVDSDNNYYITDEYN 161
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HR+Q + +G+ I + GS G G++ P+G+A++ Q + + D+ NNRIQ+F G+F
Sbjct: 162 HRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVYIADTYNNRIQVFDKKGEFQ 221
Query: 280 RAFGCWGSGDGEFKGLEGVAV---MSNGNILVCDRENHRIQVF 319
R G +G G ++ + ++G++ V D N+RI F
Sbjct: 222 RVIGTGSAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRIMKF 264
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 134/297 (45%), Gaps = 42/297 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-----------LAFTWPRGI 103
F +P + +I + D+ N+RV + + ++ V + P +
Sbjct: 280 FVYPNQVLPDGKGNIYITDTGNNRVLL---YNEVGLTAVMKKTLGNERNGNTQYAGPYDV 336
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM---------GNKAGQLEHPHYIAVSN 154
+ ++ V+DS NHR+ + G VGK+GS+ G+ GQ P IA
Sbjct: 337 ERDTNGNVFVSDSFNHRILKYDISGKVVGKWGSLFGAGGPLGYGSLPGQFYVPRQIATDR 396
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
N V VSDS NHR+Q F+ +G V S +GS G G + P IA+ + + +
Sbjct: 397 YNNVYVSDSVNHRIQKFNNSGIVLAS-------YGSFGVLPGFFQFPSGIAIDSKGNIFI 449
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+DS NHR+Q + + +G +GS EG+ P +A+D + + V D NNR+Q F
Sbjct: 450 ADSENHRIQKLNPFFVYMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVDRINNRVQKFDN 509
Query: 275 DGQFLRAFGC------------WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G F+ +G W G G+ G+ + N + V D N+R+ ++
Sbjct: 510 EGNFITKWGTNHGAGNLDPLENWREGPGDLFLPIGIEIDINNTVYVTDTSNNRVNIY 566
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 7/190 (3%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+V +G + + L P +A + V D N+R+ D NG V V G
Sbjct: 32 YVKSWGGELDTSKLLRTPVAMARDAKGFLYVVDMGNNRILKIDKNGEV-------VDAIG 84
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
++G GQ P IAV ++V+D+ N+R+Q F+ + I S+G++G Q FPR
Sbjct: 85 TLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSFPR 144
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+AVD + D N+RIQ ++PDGQ+++ G +G +GE +G+A+ + +
Sbjct: 145 EIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVYIA 204
Query: 310 DRENHRIQVF 319
D N+RIQVF
Sbjct: 205 DTYNNRIQVF 214
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+ + S+G E L+ P +A D +G++ V D GNNRI +G+ + A G G G
Sbjct: 31 KYVKSWGGELDTSKLLRTPVAMARDAKGFLYVVDMGNNRILKIDKNGEVVDAIGTLGEGP 90
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F G+AV GNILV D N+RIQ F
Sbjct: 91 GQFNMPFGIAVDKEGNILVADTANYRIQKF 120
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 52 PGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL-----KTNCVFLAFTWPRGIAVG 106
PG P GI + +N++ V D+SN+RV + + D N + F P+GI V
Sbjct: 536 PGDLFLPIGIEIDINNTVYVTDTSNNRVNIYNENGDFLESFGSFNGMSGQFFSPQGIDVD 595
Query: 107 PDNSIVVADSSNHRVQVFQS 126
+I++ D R+Q F+
Sbjct: 596 SQGNIIITDGLLQRIQFFKK 615
>gi|156372674|ref|XP_001629161.1| predicted protein [Nematostella vectensis]
gi|156216155|gb|EDO37098.1| predicted protein [Nematostella vectensis]
Length = 231
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 127/228 (55%), Gaps = 16/228 (7%)
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P G+AV ++I VAD N+R+Q F +G F KF G GQ++ P AV N V
Sbjct: 13 YPAGVAVDKSSNIFVADHGNNRIQAFTQEGEFTRKFDGKGTGIGQMKGPCGAAVDGENWV 72
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+V+D +NHR+Q+FD S+G F+ FGS G+ G+ P +I+VS ++VSD+
Sbjct: 73 LVADRDNHRIQVFD-------SEGNFLFTFGSYGDSQGKFNCPRHISVSMKGEILVSDAG 125
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
N RVQ+FD G ++ FG +GS GQ P GVA D +G+I V D N +Q+F DG+
Sbjct: 126 NFRVQVFDGAGNFLSKFGEKGSNNGQFSCPAGVATDAEGHIVVADLKNLNVQVFNSDGEL 185
Query: 279 LRAFGCWGSGD-------GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++ S D F +GVA+ N +++V R H++ +F
Sbjct: 186 IKRIRI--SQDPVSVRNASYFGKPKGVAISDNVSVVVASRGLHKVMLF 231
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 107/186 (57%), Gaps = 7/186 (3%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG+ G G++ +P +AV ++ + V+D N+R+Q F +G F KF G
Sbjct: 1 FGARGTGDGEIWYPAGVAVDKSSNIFVADHGNNRIQ-------AFTQEGEFTRKFDGKGT 53
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
GQ++ P AV N V+V+D +NHR+Q+FD G + +FGS G +G+ PR ++V
Sbjct: 54 GIGQMKGPCGAAVDGENWVLVADRDNHRIQVFDSEGNFLFTFGSYGDSQGKFNCPRHISV 113
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
+G I V D+GN R+Q+F G FL FG GS +G+F GVA + G+I+V D +N
Sbjct: 114 SMKGEILVSDAGNFRVQVFDGAGNFLSKFGEKGSNNGQFSCPAGVATDAEGHIVVADLKN 173
Query: 314 HRIQVF 319
+QVF
Sbjct: 174 LNVQVF 179
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 119/239 (49%), Gaps = 19/239 (7%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH------FDLKTNCVFLAFT 98
G+RG+ G +P G+AV ++I VAD N+R+Q FD K +
Sbjct: 1 FGARGTGDGEIWYPAGVAVDKSSNIFVADHGNNRIQAFTQEGEFTRKFDGKGTGI-GQMK 59
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P G AV +N ++VAD NHR+QVF S+G F+ FGS G+ G+ P +I+VS +
Sbjct: 60 GPCGAAVDGENWVLVADRDNHRIQVFDSEGNFLFTFGSYGDSQGKFNCPRHISVSMKGEI 119
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+VSD+ N RVQ+FD G F+ KFG G+ GQ P +A ++V+D
Sbjct: 120 LVSDAGNFRVQVFD-------GAGNFLSKFGEKGSNNGQFSCPAGVATDAEGHIVVADLK 172
Query: 219 NHRVQIFDVNGRVITSFGSEGS-----EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
N VQ+F+ +G +I P+GVA+ D + V G +++ +F
Sbjct: 173 NLNVQVFNSDGELIKRIRISQDPVSVRNASYFGKPKGVAISDNVSVVVASRGLHKVMLF 231
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
+ Q+ K +G+ G P G AV +N ++VAD NHR+QV FD + N +F
Sbjct: 38 FTQEGEFTRKFDGKGTGIGQMKGPCGAAVDGENWVLVADRDNHRIQV----FDSEGNFLF 93
Query: 95 L---------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE 145
F PR I+V I+V+D+ N RVQVF G F+ KFG G+ GQ
Sbjct: 94 TFGSYGDSQGKFNCPRHISVSMKGEILVSDAGNFRVQVFDGAGNFLSKFGEKGSNNGQFS 153
Query: 146 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
P +A ++V+D N VQ+F+ +G + + + + A P +A
Sbjct: 154 CPAGVATDAEGHIVVADLKNLNVQVFNSDGELIKR--IRISQDPVSVRNASYFGKPKGVA 211
Query: 206 VSNTNRVIVSDSNNHRVQIF 225
+S+ V+V+ H+V +F
Sbjct: 212 ISDNVSVVVASRGLHKVMLF 231
>gi|423454569|ref|ZP_17431422.1| hypothetical protein IEE_03313 [Bacillus cereus BAG5X1-1]
gi|401135538|gb|EJQ43135.1| hypothetical protein IEE_03313 [Bacillus cereus BAG5X1-1]
Length = 617
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 148/282 (52%), Gaps = 9/282 (3%)
Query: 46 GSRGSEPGCFTWPRGIAVGP-DNSIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWPRG 102
G G P F PRGI S+ VAD+ N+R+ + F + D L T F F +P
Sbjct: 227 GIAGLGPYQFYHPRGINFDSISGSLYVADTYNNRI-MKFTNKDQFLYTVGNFFQFVYPNQ 285
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNK---AGQLEHPHYIAVSNTNRVI 159
+ +I + D+ N+RV ++ G +GN+ Q P+ + V
Sbjct: 286 VLPDGQGNIYITDTGNNRVLLYNEVGLTAIMKKIIGNERSGTTQYSGPYDVERDTNGNVF 345
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG--NKAGQLEHPHYIAVSNTNRVIVSDS 217
VSDS NHR+ +D++G++ G+ G G +G + GQ P IA+ N V VSDS
Sbjct: 346 VSDSFNHRILKYDISGKIVGKWGSLFGAGGPLGFGSLPGQFFVPRQIAMDRYNNVYVSDS 405
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NHR+Q F +G V+ S+GS G G +FP G+A+D +G I + DS NNRIQ F P
Sbjct: 406 VNHRIQKFTNSGIVLASYGSFGVLPGFFQFPSGIAIDSKGNIFIADSENNRIQKFNPFFV 465
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+++ +G GSG+GEF +A+ S N+ V DR N+RIQ F
Sbjct: 466 YMKEWGRKGSGEGEFSQPMQLAIDSKDNVYVVDRINNRIQKF 507
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 141/281 (50%), Gaps = 18/281 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTW 99
IG+ G PG F P GIAV + +I+VAD++N+R+Q F + F++
Sbjct: 83 IGTLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEQFQFIKSWGTKGQGNEQFSF 142
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PR IAV DN+ + D NHR+Q + DG ++ G+ G G+L P IA++ + +
Sbjct: 143 PREIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGNYGKANGELALPQGIAINKQDEIY 202
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDSN 218
++D+ N+R+Q+FD NG + G + G Q HP I S + + V+D+
Sbjct: 203 IADTYNNRIQVFDKNGEFQRVIGNGIAGLGPY-----QFYHPRGINFDSISGSLYVADTY 257
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ- 277
N+R+ F + + + G+ Q +P V D QG I + D+GNNR+ ++ G
Sbjct: 258 NNRIMKFTNKDQFLYTVGN----FFQFVYPNQVLPDGQGNIYITDTGNNRVLLYNEVGLT 313
Query: 278 --FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+ G SG ++ G V +NGN+ V D NHRI
Sbjct: 314 AIMKKIIGNERSGTTQYSGPYDVERDTNGNVFVSDSFNHRI 354
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 151/305 (49%), Gaps = 41/305 (13%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL------KTNCVFLA-- 96
IG+ S ++ P + + ++ V+DS NHR+ +D+ K +F A
Sbjct: 320 IGNERSGTTQYSGPYDVERDTNGNVFVSDSFNHRIL----KYDISGKIVGKWGSLFGAGG 375
Query: 97 ----------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH 146
F PR IA+ N++ V+DS NHR+Q F + G + +GS G G +
Sbjct: 376 PLGFGSLPGQFFVPRQIAMDRYNNVYVSDSVNHRIQKFTNSGIVLASYGSFGVLPGFFQF 435
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
P IA+ + + ++DS N+R+Q F+ F ++ ++G G+ G+ P +A+
Sbjct: 436 PSGIAIDSKGNIFIADSENNRIQKFN---PFF----VYMKEWGRKGSGEGEFSQPMQLAI 488
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSE---GSEE---------GQLKFPRGVAVD 254
+ + V V D N+R+Q FD +G+ +T +G+ GS + G L P G+ +D
Sbjct: 489 DSKDNVYVVDRINNRIQKFDNDGKFLTKWGTNHGAGSLDPLENWREGPGDLFLPIGIEID 548
Query: 255 DQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+ V D+ NNR+ I+ +G FL +FG + G+F +G+ V S GNI++ D
Sbjct: 549 INNTVYVTDTSNNRVNIYNENGIFLESFGSFNGMSGQFFSPQGIDVDSQGNIIITDGLLQ 608
Query: 315 RIQVF 319
RIQ F
Sbjct: 609 RIQFF 613
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 114/223 (51%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A + V D N+RV +G V G++G GQ P IAV ++
Sbjct: 49 PVAMARDAKGFLYVVDMGNNRVVKIDKNGEVVDAIGTLGEGPGQFNMPFGIAVDKEGNIL 108
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ N+R+Q F+ FQ F+ +G+ G Q P IAV + N ++D N
Sbjct: 109 VADTANYRIQKFN---EQFQ----FIKSWGTKGQGNEQFSFPREIAVDSDNNYYITDEYN 161
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HR+Q + +G+ I + G+ G G+L P+G+A++ Q I + D+ NNRIQ+F +G+F
Sbjct: 162 HRIQKYSPDGQYIQTIGNYGKANGELALPQGIAINKQDEIYIADTYNNRIQVFDKNGEFQ 221
Query: 280 RAF--GCWGSGDGEFKGLEGVAVMS-NGNILVCDRENHRIQVF 319
R G G G +F G+ S +G++ V D N+RI F
Sbjct: 222 RVIGNGIAGLGPYQFYHPRGINFDSISGSLYVADTYNNRIMKF 264
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 136/295 (46%), Gaps = 38/295 (12%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------AFTWPRGIAV 105
F +P + +I + D+ N+RV + + L + ++ P +
Sbjct: 280 FVYPNQVLPDGQGNIYITDTGNNRV-LLYNEVGLTAIMKKIIGNERSGTTQYSGPYDVER 338
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM---------GNKAGQLEHPHYIAVSNTN 156
+ ++ V+DS NHR+ + G VGK+GS+ G+ GQ P IA+ N
Sbjct: 339 DTNGNVFVSDSFNHRILKYDISGKIVGKWGSLFGAGGPLGFGSLPGQFFVPRQIAMDRYN 398
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
V VSDS NHR+Q F +G V S +GS G G + P IA+ + + ++D
Sbjct: 399 NVYVSDSVNHRIQKFTNSGIVLAS-------YGSFGVLPGFFQFPSGIAIDSKGNIFIAD 451
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
S N+R+Q F+ + +G +GS EG+ P +A+D + + V D NNRIQ F DG
Sbjct: 452 SENNRIQKFNPFFVYMKEWGRKGSGEGEFSQPMQLAIDSKDNVYVVDRINNRIQKFDNDG 511
Query: 277 QFLRAFGC------------WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+FL +G W G G+ G+ + N + V D N+R+ ++
Sbjct: 512 KFLTKWGTNHGAGSLDPLENWREGPGDLFLPIGIEIDINNTVYVTDTSNNRVNIY 566
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+V +GS + + L P +A + V D N+RV D NG V V G
Sbjct: 32 YVNSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRVVKIDKNGEV-------VDAIG 84
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
++G GQ P IAV ++V+D+ N+R+Q F+ + I S+G++G Q FPR
Sbjct: 85 TLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEQFQFIKSWGTKGQGNEQFSFPR 144
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+AVD + D N+RIQ ++PDGQ+++ G +G +GE +G+A+ I +
Sbjct: 145 EIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGNYGKANGELALPQGIAINKQDEIYIA 204
Query: 310 DRENHRIQVF 319
D N+RIQVF
Sbjct: 205 DTYNNRIQVF 214
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+ + S+GSE L+ P +A D +G++ V D GNNR+ +G+ + A G G G
Sbjct: 31 KYVNSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRVVKIDKNGEVVDAIGTLGEGP 90
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F G+AV GNILV D N+RIQ F
Sbjct: 91 GQFNMPFGIAVDKEGNILVADTANYRIQKF 120
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 17/86 (19%)
Query: 52 PGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----------FTWP 100
PG P GI + +N++ V D+SN+RV + N +FL F P
Sbjct: 536 PGDLFLPIGIEIDINNTVYVTDTSNNRVNI------YNENGIFLESFGSFNGMSGQFFSP 589
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQS 126
+GI V +I++ D R+Q F+
Sbjct: 590 QGIDVDSQGNIIITDGLLQRIQFFKK 615
>gi|229155542|ref|ZP_04283650.1| Cell surface protein [Bacillus cereus ATCC 4342]
gi|228627860|gb|EEK84579.1| Cell surface protein [Bacillus cereus ATCC 4342]
Length = 598
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 149/282 (52%), Gaps = 9/282 (3%)
Query: 46 GSRGSEPGCFTWPRGIAV-GPDNSIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWPRG 102
GS G P F PRGI S+ VAD+ N+R+ + F + D L T F F +P
Sbjct: 208 GSAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRI-MKFTNKDQFLYTVGNFFQFVYPNQ 266
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG---QLEHPHYIAVSNTNRVI 159
+ +I + D+ N+RV ++ G ++GN+ Q P+ + V
Sbjct: 267 VLPDGKGNIYITDTGNNRVLLYNEVGLTAVMKKTLGNERNGNTQYAGPYDVERDTNGNVF 326
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG--NKAGQLEHPHYIAVSNTNRVIVSDS 217
VSDS NHR+ +D++G+V G+ G G +G + GQ P IA N V VSDS
Sbjct: 327 VSDSFNHRILKYDISGKVVGKWGSLFGAGGPLGYGSLPGQFYVPRQIATDRYNNVYVSDS 386
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NHR+Q F+ +G V+ S+GS G G +FP G+A+D +G I + DS N+RIQ P
Sbjct: 387 VNHRIQKFNNSGIVLASYGSFGVLPGFFQFPSGIAIDSKGNIFIADSENHRIQKLNPFFV 446
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+++ +G GSG+GEF +A+ S N+ V DR N+R+Q F
Sbjct: 447 YMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVDRINNRVQKF 488
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 144/281 (51%), Gaps = 18/281 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTW 99
IG+ G PG F P GIAV + +I+VAD++N+R+Q F + F++
Sbjct: 64 IGTLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSF 123
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PR IAV DN+ + D NHR+Q + DG ++ GS G G++ P IA++ + V
Sbjct: 124 PREIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVY 183
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSN 218
++D+ N+R+Q+FD G + GT GS G Q HP I +T+ + V+D+
Sbjct: 184 IADTYNNRIQVFDKKGEFQRVIGT-----GSAGLGPYQFYHPRGINFDSTSGSLYVADTY 238
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ- 277
N+R+ F + + + G+ Q +P V D +G I + D+GNNR+ ++ G
Sbjct: 239 NNRIMKFTNKDQFLYTVGN----FFQFVYPNQVLPDGKGNIYITDTGNNRVLLYNEVGLT 294
Query: 278 --FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+ G +G+ ++ G V +NGN+ V D NHRI
Sbjct: 295 AVMKKTLGNERNGNTQYAGPYDVERDTNGNVFVSDSFNHRI 335
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 141/295 (47%), Gaps = 41/295 (13%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL------KTNCVFLA------------ 96
+ P + + ++ V+DS NHR+ +D+ K +F A
Sbjct: 311 YAGPYDVERDTNGNVFVSDSFNHRIL----KYDISGKVVGKWGSLFGAGGPLGYGSLPGQ 366
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F PR IA N++ V+DS NHR+Q F + G + +GS G G + P IA+ +
Sbjct: 367 FYVPRQIATDRYNNVYVSDSVNHRIQKFNNSGIVLASYGSFGVLPGFFQFPSGIAIDSKG 426
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ ++DS NHR+Q + F ++ ++G G+ G+ P +A+ + + V V D
Sbjct: 427 NIFIADSENHRIQKLN---PFF----VYMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVD 479
Query: 217 SNNHRVQIFDVNGRVITSFGS----------EGSEEG--QLKFPRGVAVDDQGYISVGDS 264
N+RVQ FD G IT +G+ E EG L P G+ +D + V D+
Sbjct: 480 RINNRVQKFDNEGNFITKWGTNHGAGNLDPLENWREGPGDLFLPIGIEIDINNTVYVTDT 539
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NNR+ I+ +G FL +FG + G+F +G+ V S GNI++ D RIQ F
Sbjct: 540 SNNRVNIYNENGDFLESFGSFNGMSGQFFSPQGIDVDSQGNIIITDGLLQRIQFF 594
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A + V D N+R+ +G V G++G GQ P IAV ++
Sbjct: 30 PVAMARDAKGFLYVVDMGNNRILKIDKNGEVVDAIGTLGEGPGQFNMPFGIAVDKEGNIL 89
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ N+R+Q F+ FQ F+ +G+ G + Q P IAV + N ++D N
Sbjct: 90 VADTANYRIQKFN---EEFQ----FIKSWGTKGKGSEQFSFPREIAVDSDNNYYITDEYN 142
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HR+Q + +G+ I + GS G G++ P+G+A++ Q + + D+ NNRIQ+F G+F
Sbjct: 143 HRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVYIADTYNNRIQVFDKKGEFQ 202
Query: 280 RAFGCWGSGDGEFKGLEGVAV---MSNGNILVCDRENHRIQVF 319
R G +G G ++ + ++G++ V D N+RI F
Sbjct: 203 RVIGTGSAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRIMKF 245
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+V +GS + + L P +A + V D N+R+ D NG V V G
Sbjct: 13 YVKSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRILKIDKNGEV-------VDAIG 65
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
++G GQ P IAV ++V+D+ N+R+Q F+ + I S+G++G Q FPR
Sbjct: 66 TLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSFPR 125
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+AVD + D N+RIQ ++PDGQ+++ G +G +GE +G+A+ + +
Sbjct: 126 EIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVYIA 185
Query: 310 DRENHRIQVF 319
D N+RIQVF
Sbjct: 186 DTYNNRIQVF 195
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 134/297 (45%), Gaps = 42/297 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-----------LAFTWPRGI 103
F +P + +I + D+ N+RV + + ++ V + P +
Sbjct: 261 FVYPNQVLPDGKGNIYITDTGNNRVLL---YNEVGLTAVMKKTLGNERNGNTQYAGPYDV 317
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM---------GNKAGQLEHPHYIAVSN 154
+ ++ V+DS NHR+ + G VGK+GS+ G+ GQ P IA
Sbjct: 318 ERDTNGNVFVSDSFNHRILKYDISGKVVGKWGSLFGAGGPLGYGSLPGQFYVPRQIATDR 377
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
N V VSDS NHR+Q F+ +G V S +GS G G + P IA+ + + +
Sbjct: 378 YNNVYVSDSVNHRIQKFNNSGIVLAS-------YGSFGVLPGFFQFPSGIAIDSKGNIFI 430
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+DS NHR+Q + + +G +GS EG+ P +A+D + + V D NNR+Q F
Sbjct: 431 ADSENHRIQKLNPFFVYMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVDRINNRVQKFDN 490
Query: 275 DGQFLRAFGC------------WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G F+ +G W G G+ G+ + N + V D N+R+ ++
Sbjct: 491 EGNFITKWGTNHGAGNLDPLENWREGPGDLFLPIGIEIDINNTVYVTDTSNNRVNIY 547
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+ + S+GSE L+ P +A D +G++ V D GNNRI +G+ + A G G G
Sbjct: 12 KYVKSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRILKIDKNGEVVDAIGTLGEGP 71
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F G+AV GNILV D N+RIQ F
Sbjct: 72 GQFNMPFGIAVDKEGNILVADTANYRIQKF 101
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 52 PGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL-----KTNCVFLAFTWPRGIAVG 106
PG P GI + +N++ V D+SN+RV + + D N + F P+GI V
Sbjct: 517 PGDLFLPIGIEIDINNTVYVTDTSNNRVNIYNENGDFLESFGSFNGMSGQFFSPQGIDVD 576
Query: 107 PDNSIVVADSSNHRVQVFQS 126
+I++ D R+Q F+
Sbjct: 577 SQGNIIITDGLLQRIQFFKK 596
>gi|158292612|ref|XP_314006.4| AGAP005125-PA [Anopheles gambiae str. PEST]
gi|157017073|gb|EAA09534.4| AGAP005125-PA [Anopheles gambiae str. PEST]
Length = 875
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 140/288 (48%), Gaps = 34/288 (11%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH--FDLKTNCVFLA---F 97
G G E G + P GI V D I+VAD N+RVQ+ +P F LK A F
Sbjct: 578 LTFGFDGHEDGQVSRPWGITVDKDGQILVADRRNNRVQIFYPDGTFKLKFGSKGTANGQF 637
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P GI I+V D NHRVQVF + G F+ KFGS G + GQ ++P +AV+
Sbjct: 638 DLPAGICTDGQGRIIVVDKDNHRVQVFSAGGLFLLKFGSYGKECGQFQYPWDVAVNTKGE 697
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR------ 211
++V+DS NHR+Q+ F DG F+ ++ G + H Y+ T R
Sbjct: 698 ILVTDSRNHRIQL-------FSPDGLFISRYSFDG-----VNHSRYLKGLTTPRGACFTP 745
Query: 212 ---VIVSDSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+I+SD NHR+ + D +V+ + G EGS + P G+ DD G + V DS N
Sbjct: 746 QGDIIISDFENHRLLLIDATLSKVLAAKGHEGSAVHEFSRPSGICCDDDGRVIVADSKNQ 805
Query: 268 RIQIFTPDGQFLRAF-------GCWGSGDGEFKGLEGVAVMSNGNILV 308
R+ +F+P +FL A G G E VA++ +G ++V
Sbjct: 806 RVLVFSPQLEFLWAVEIRPSSNGLLAIGMDEKDRPSDVALLPDGRLVV 853
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 120/225 (53%), Gaps = 12/225 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GI V D I+VAD N+RVQ+F DGTF KFGS G GQ + P I R+I
Sbjct: 593 PWGITVDKDGQILVADRRNNRVQIFYPDGTFKLKFGSKGTANGQFDLPAGICTDGQGRII 652
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D +NHRVQ VF + G F+ KFGS G + GQ ++P +AV+ ++V+DS N
Sbjct: 653 VVDKDNHRVQ-------VFSAGGLFLLKFGSYGKECGQFQYPWDVAVNTKGEILVTDSRN 705
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQ----LKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
HR+Q+F +G I+ + +G + L PRG QG I + D N+R+ +
Sbjct: 706 HRIQLFSPDGLFISRYSFDGVNHSRYLKGLTTPRGACFTPQGDIIISDFENHRLLLIDAT 765
Query: 276 -GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ L A G GS EF G+ +G ++V D +N R+ VF
Sbjct: 766 LSKVLAAKGHEGSAVHEFSRPSGICCDDDGRVIVADSKNQRVLVF 810
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 105/190 (55%), Gaps = 11/190 (5%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G++ GQ+ P I V +++V+D N+RVQIF DGTF KFGS G
Sbjct: 580 FGFDGHEDGQVSRPWGITVDKDGQILVADRRNNRVQIF-------YPDGTFKLKFGSKGT 632
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
GQ + P I R+IV D +NHRVQ+F G + FGS G E GQ ++P VAV
Sbjct: 633 ANGQFDLPAGICTDGQGRIIVVDKDNHRVQVFSAGGLFLLKFGSYGKECGQFQYPWDVAV 692
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF-KGL---EGVAVMSNGNILVC 309
+ +G I V DS N+RIQ+F+PDG F+ + G + KGL G G+I++
Sbjct: 693 NTKGEILVTDSRNHRIQLFSPDGLFISRYSFDGVNHSRYLKGLTTPRGACFTPQGDIIIS 752
Query: 310 DRENHRIQVF 319
D ENHR+ +
Sbjct: 753 DFENHRLLLI 762
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 111/271 (40%), Gaps = 47/271 (17%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
+ K GS+G+ G F P GI I+V D NHRVQV +FL
Sbjct: 623 FKLKFGSKGTANGQFDLPAGICTDGQGRIIVVDKDNHRVQV------FSAGGLFLLKFGS 676
Query: 97 -------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
F +P +AV I+V DS NHR+Q+F DG F+ ++ G + H Y
Sbjct: 677 YGKECGQFQYPWDVAVNTKGEILVTDSRNHRIQLFSPDGLFISRYSFDG-----VNHSRY 731
Query: 150 IAVSNTNR---------VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
+ T R +I+SD NHR+ + D + + G G+ +
Sbjct: 732 LKGLTTPRGACFTPQGDIIISDFENHRLLLIDA------TLSKVLAAKGHEGSAVHEFSR 785
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF-------PRGVAV 253
P I + RVIV+DS N RV +F + + S G L P VA+
Sbjct: 786 PSGICCDDDGRVIVADSKNQRVLVFSPQLEFLWAVEIRPSSNGLLAIGMDEKDRPSDVAL 845
Query: 254 --DDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
D + + V S + R Q +P F++ +
Sbjct: 846 LPDGRLVVMVETSPDARDQC-SPQKTFIQIY 875
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 54/86 (62%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+FG +G E+GQ+ P G+ VD G I V D NNR+QIF PDG F FG G+ +G+F
Sbjct: 579 TFGFDGHEDGQVSRPWGITVDKDGQILVADRRNNRVQIFYPDGTFKLKFGSKGTANGQFD 638
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ G I+V D++NHR+QVF
Sbjct: 639 LPAGICTDGQGRIIVVDKDNHRVQVF 664
>gi|421872066|ref|ZP_16303685.1| NHL repeat family protein [Brevibacillus laterosporus GI-9]
gi|372458678|emb|CCF13234.1| NHL repeat family protein [Brevibacillus laterosporus GI-9]
Length = 633
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 149/309 (48%), Gaps = 49/309 (15%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV-FLAFTW---- 99
IG+ + + P + + +I VADS NHR+ LK N L W
Sbjct: 336 IGNSRGDKKQYAGPFDVEIDKSGNIFVADSFNHRI--------LKYNSSGVLVGKWGNNF 387
Query: 100 -----------------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
PR +A+ + VADS NHR+Q F + G FV +GSMG +G
Sbjct: 388 GNGGPNAFGSLPGQFIVPRQVAIDAYGFVYVADSVNHRIQKFTNTGVFVATYGSMGYLSG 447
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
+ P +AV + + V+D+ NHR+Q F+ F ++ ++G G K GQ P
Sbjct: 448 FFQFPAGVAVDSKGNIFVADTLNHRIQKFN---PFF----IYMTEWGQKGTKDGQFNQPM 500
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSE------------EGQLKFPRG 250
+A+ + + + V D NNHR+Q FD +GR + +G+ G +G L P G
Sbjct: 501 QLAIDSKDNIYVVDRNNHRIQKFDNSGRFLAKWGTNGGAGATDPLGNWKEGKGDLFLPIG 560
Query: 251 VAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
+A+D Q + V D+ NNR++++ +G+FL +G + DG F +GV + S+G + + D
Sbjct: 561 IAIDKQDRVYVTDTSNNRMEMYDQEGKFLEEWGYFSGADGHFFSPQGVGIDSSGALWIAD 620
Query: 311 RENHRIQVF 319
R+Q F
Sbjct: 621 GLLQRLQKF 629
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 152/338 (44%), Gaps = 70/338 (20%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK-------TNCVFLAF 97
IG+ G G P+GIA+ P + + +AD+ N+R+QV + + F
Sbjct: 193 IGTYGKGQGELALPQGIAISPTDEVYIADTFNNRIQVFNDKGKFQRQIGKGESGLGSYQF 252
Query: 98 TWPRGIAVGP-DNSIVVADSSNHRVQVFQSDGTFV--------------------GKF-- 134
+PRGI P ++ VAD+ N+R+ F F+ GKF
Sbjct: 253 NFPRGINFDPLSSAFYVADTFNNRIMKFDQQDHFLYTVGLFPILIYPNQVLPDGGGKFYV 312
Query: 135 ---------------------GSMGNKAG---QLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
GS+GN G Q P + + + + V+DS NHR+
Sbjct: 313 TDTGHNRIVVYKDSVLSAVLDGSIGNSRGDKKQYAGPFDVEIDKSGNIFVADSFNHRILK 372
Query: 171 FDVNGRVFQSDGTFVGKFG---------SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
++ S G VGK+G + G+ GQ P +A+ V V+DS NHR
Sbjct: 373 YN-------SSGVLVGKWGNNFGNGGPNAFGSLPGQFIVPRQVAIDAYGFVYVADSVNHR 425
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+Q F G + ++GS G G +FP GVAVD +G I V D+ N+RIQ F P ++
Sbjct: 426 IQKFTNTGVFVATYGSMGYLSGFFQFPAGVAVDSKGNIFVADTLNHRIQKFNPFFIYMTE 485
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G G+ DG+F +A+ S NI V DR NHRIQ F
Sbjct: 486 WGQKGTKDGQFNQPMQLAIDSKDNIYVVDRNNHRIQKF 523
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 121/242 (50%), Gaps = 22/242 (9%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----------F 97
GS PG F PR +A+ + VADS NHR+Q VF+A F
Sbjct: 396 GSLPGQFIVPRQVAIDAYGFVYVADSVNHRIQ------KFTNTGVFVATYGSMGYLSGFF 449
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
+P G+AV +I VAD+ NHR+Q F ++ ++G G K GQ P +A+ + +
Sbjct: 450 QFPAGVAVDSKGNIFVADTLNHRIQKFNPFFIYMTEWGQKGTKDGQFNQPMQLAIDSKDN 509
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGK-----FGSMGNKAGQLEHPHYIAVSNTNRV 212
+ V D NNHR+Q FD +GR GT G G+ G L P IA+ +RV
Sbjct: 510 IYVVDRNNHRIQKFDNSGRFLAKWGTNGGAGATDPLGNWKEGKGDLFLPIGIAIDKQDRV 569
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V+D++N+R++++D G+ + +G +G P+GV +D G + + D R+Q F
Sbjct: 570 YVTDTSNNRMEMYDQEGKFLEEWGYFSGADGHFFSPQGVGIDSSGALWIADGLLQRLQKF 629
Query: 273 TP 274
P
Sbjct: 630 VP 631
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 112/228 (49%), Gaps = 14/228 (6%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P +A +I VAD NHR+ G + FG +G+K G+ P +A+
Sbjct: 62 FRTPVAMAKDLTGNIYVADMGNHRIVKMNKSGKVLETFGGLGDKPGKFNMPFGVAIDKEG 121
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++V+D+ N+R+Q FD F+ +G+ G G+ P +AV + N V+D
Sbjct: 122 NILVADTGNYRIQKFD-------HQFHFLKSWGTRGKGEGEFGFPRELAVDSKNNYYVTD 174
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
NHR+Q FD G + + G+ G +G+L P+G+A+ + + D+ NNRIQ+F G
Sbjct: 175 EYNHRIQKFDQAGTYLLTIGTYGKGQGELALPQGIAISPTDEVYIADTFNNRIQVFNDKG 234
Query: 277 QFLRAFGCWGSGDGEF-----KGLEGVAVMSNGNILVCDRENHRIQVF 319
+F R G SG G + +G+ + S V D N+RI F
Sbjct: 235 KFQRQIGKGESGLGSYQFNFPRGINFDPLSS--AFYVADTFNNRIMKF 280
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 7/197 (3%)
Query: 123 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDG 182
VF S T+ +G+ + P +A T + V+D NHR+ + +G+V ++
Sbjct: 41 VFASSFTYSEAWGNEADDPSMFRTPVAMAKDLTGNIYVADMGNHRIVKMNKSGKVLET-- 98
Query: 183 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
FG +G+K G+ P +A+ ++V+D+ N+R+Q FD + S+G+ G E
Sbjct: 99 -----FGGLGDKPGKFNMPFGVAIDKEGNILVADTGNYRIQKFDHQFHFLKSWGTRGKGE 153
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMS 302
G+ FPR +AVD + V D N+RIQ F G +L G +G G GE +G+A+
Sbjct: 154 GEFGFPRELAVDSKNNYYVTDEYNHRIQKFDQAGTYLLTIGTYGKGQGELALPQGIAISP 213
Query: 303 NGNILVCDRENHRIQVF 319
+ + D N+RIQVF
Sbjct: 214 TDEVYIADTFNNRIQVF 230
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 117/248 (47%), Gaps = 15/248 (6%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWP 100
G+ +P F P +A +I VAD NHR+ + L F P
Sbjct: 53 GNEADDPSMFRTPVAMAKDLTGNIYVADMGNHRIVKMNKSGKVLETFGGLGDKPGKFNMP 112
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+A+ + +I+VAD+ N+R+Q F F+ +G+ G G+ P +AV + N V
Sbjct: 113 FGVAIDKEGNILVADTGNYRIQKFDHQFHFLKSWGTRGKGEGEFGFPRELAVDSKNNYYV 172
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+D NHR+Q FD GT++ G+ G G+L P IA+S T+ V ++D+ N+
Sbjct: 173 TDEYNHRIQKFD-------QAGTYLLTIGTYGKGQGELALPQGIAISPTDEVYIADTFNN 225
Query: 221 RVQIFDVNGRVITSFGSEGSEEG--QLKFPRGVAVDD-QGYISVGDSGNNRIQIFTPDGQ 277
R+Q+F+ G+ G S G Q FPRG+ D V D+ NNRI F
Sbjct: 226 RIQVFNDKGKFQRQIGKGESGLGSYQFNFPRGINFDPLSSAFYVADTFNNRIMKFDQQDH 285
Query: 278 FLRAFGCW 285
FL G +
Sbjct: 286 FLYTVGLF 293
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 88/172 (51%), Gaps = 5/172 (2%)
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
H + V+N +I S +F V VF S T+ +G+ + P +A
Sbjct: 17 HTLFVTNLLAIICS-----FFLLFIVGSPVFASSFTYSEAWGNEADDPSMFRTPVAMAKD 71
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
T + V+D NHR+ + +G+V+ +FG G + G+ P GVA+D +G I V D+GN
Sbjct: 72 LTGNIYVADMGNHRIVKMNKSGKVLETFGGLGDKPGKFNMPFGVAIDKEGNILVADTGNY 131
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
RIQ F FL+++G G G+GEF +AV S N V D NHRIQ F
Sbjct: 132 RIQKFDHQFHFLKSWGTRGKGEGEFGFPRELAVDSKNNYYVTDEYNHRIQKF 183
>gi|340382512|ref|XP_003389763.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Amphimedon
queenslandica]
Length = 1354
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 133/247 (53%), Gaps = 28/247 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAV 105
GS GS G F PR IA+ S ++ + +K+ +FL G
Sbjct: 1128 GSEGSANGQFQSPRDIAI----------DSQGLMESLWVTLVIKS--LFL------GQLK 1169
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
P + +AD NHR+QV D TF FGS G+ GQ ++P IA+ + V V+DS N
Sbjct: 1170 EPHGQVYIADRDNHRIQVLNPDLTFSHSFGSEGSANGQFQYPTDIAIDSQGLVYVTDSEN 1229
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
HR+Q F +NG + + +FG+ G+ G+L++P I + + ++D+ NHR+Q+
Sbjct: 1230 HRIQKFTLNGNL-------MVQFGTYGSGPGELKYPVGITIDTAD---IADNGNHRIQVL 1279
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
+ + SFGS+GS GQ K P G+ +D QG + V DS N+RIQ F+PDG+F FG +
Sbjct: 1280 NPDLTFSHSFGSKGSANGQFKHPNGIVIDSQGLVYVTDSHNHRIQKFSPDGKFTGQFGTY 1339
Query: 286 GSGDGEF 292
GS G+
Sbjct: 1340 GSSPGQL 1346
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 144/314 (45%), Gaps = 57/314 (18%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP------HFDLK------TNCVFLAFTWP 100
G F +PR IA+ + VADS NHR+Q P FD K N +
Sbjct: 1023 GQFQYPRDIAIDSQGLVYVADSYNHRIQKFSPDGKFVGQFDNKGFGPGQLNIPDVEDYVE 1082
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDG-----------TFVGKFGSMGNKAGQLEHPHY 149
+ + G ++ + + G TF FGS G+ GQ + P
Sbjct: 1083 QSLKTGSPQQVLRSKKQMMERMSEVTAGINWSLFLKPYLTFSHSFGSEGSANGQFQSPRD 1142
Query: 150 IAVSNTN------------------------RVIVSDSNNHRVQIFDVNGRVFQSDGTFV 185
IA+ + +V ++D +NHR+Q V D TF
Sbjct: 1143 IAIDSQGLMESLWVTLVIKSLFLGQLKEPHGQVYIADRDNHRIQ-------VLNPDLTFS 1195
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL 245
FGS G+ GQ ++P IA+ + V V+DS NHR+Q F +NG ++ FG+ GS G+L
Sbjct: 1196 HSFGSEGSANGQFQYPTDIAIDSQGLVYVTDSENHRIQKFTLNGNLMVQFGTYGSGPGEL 1255
Query: 246 KFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
K+P G+ +D + D+GN+RIQ+ PD F +FG GS +G+FK G+ + S G
Sbjct: 1256 KYPVGITIDTA---DIADNGNHRIQVLNPDLTFSHSFGSKGSANGQFKHPNGIVIDSQGL 1312
Query: 306 ILVCDRENHRIQVF 319
+ V D NHRIQ F
Sbjct: 1313 VYVTDSHNHRIQKF 1326
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 163/379 (43%), Gaps = 98/379 (25%)
Query: 36 LQKRRLQ-----FKIGSRGSEPGCFTWPRGIAVGP-DNSIVVADSSNH---RVQVCF-PH 85
LQK R+ +G GSEP F +P GI + P + +AD++N+ + + P+
Sbjct: 904 LQKVRMADGKSIASVGRTGSEPLQFAYPAGIVISPITEQVYIADAANNCDTSLAIPINPY 963
Query: 86 FDLKTNC-VFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKA--G 142
D T +P G+AV DN +++ +++ + V + +G V FG G ++ G
Sbjct: 964 LDNITPARTITELYYPWGVAVTDDNHVIITETNGNCVTILDREGKKVKSFGGEGGRSANG 1023
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHR-----------------------VQIFDVNGRVFQ 179
Q ++P IA+ + V V+DS NHR + I DV V Q
Sbjct: 1024 QFQYPRDIAIDSQGLVYVADSYNHRIQKFSPDGKFVGQFDNKGFGPGQLNIPDVEDYVEQ 1083
Query: 180 SDGT-----------------------------------FVGKFGSMGNKAGQLEHPHYI 204
S T F FGS G+ GQ + P I
Sbjct: 1084 SLKTGSPQQVLRSKKQMMERMSEVTAGINWSLFLKPYLTFSHSFGSEGSANGQFQSPRDI 1143
Query: 205 AVSNTN------------------------RVIVSDSNNHRVQIFDVNGRVITSFGSEGS 240
A+ + +V ++D +NHR+Q+ + + SFGSEGS
Sbjct: 1144 AIDSQGLMESLWVTLVIKSLFLGQLKEPHGQVYIADRDNHRIQVLNPDLTFSHSFGSEGS 1203
Query: 241 EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
GQ ++P +A+D QG + V DS N+RIQ FT +G + FG +GSG GE K G+ +
Sbjct: 1204 ANGQFQYPTDIAIDSQGLVYVTDSENHRIQKFTLNGNLMVQFGTYGSGPGELKYPVGITI 1263
Query: 301 MSNGNILVCDRENHRIQVF 319
+ + D NHRIQV
Sbjct: 1264 DTAD---IADNGNHRIQVL 1279
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 158/381 (41%), Gaps = 106/381 (27%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHR------------------ 78
+++R++ +R + F +P G+A DN I+V D NHR
Sbjct: 863 ERKRVKSFGATRRNRSFQFFYPSGVAFTSDNFILVTD-GNHRLQKVRMADGKSIASVGRT 921
Query: 79 ----VQVCFPH-------------FDLKTNC-------------------VFLAFTWPRG 102
+Q +P D NC +P G
Sbjct: 922 GSEPLQFAYPAGIVISPITEQVYIADAANNCDTSLAIPINPYLDNITPARTITELYYPWG 981
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKA--GQLEHPHYIAVSNTNRVIV 160
+AV DN +++ +++ + V + +G V FG G ++ GQ ++P IA+ + V V
Sbjct: 982 VAVTDDNHVIITETNGNCVTILDREGKKVKSFGGEGGRSANGQFQYPRDIAIDSQGLVYV 1041
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP---HYIAVS---NTNRVIV 214
+DS NHR+Q F DG FVG+F + G GQL P Y+ S + + ++
Sbjct: 1042 ADSYNHRIQ-------KFSPDGKFVGQFDNKGFGPGQLNIPDVEDYVEQSLKTGSPQQVL 1094
Query: 215 SDSNNHRVQIFDVNGRV---------IT---SFGSEGSEEGQLKFPRGVAVDDQGYIS-- 260
++ +V + +T SFGSEGS GQ + PR +A+D QG +
Sbjct: 1095 RSKKQMMERMSEVTAGINWSLFLKPYLTFSHSFGSEGSANGQFQSPRDIAIDSQGLMESL 1154
Query: 261 ----------------------VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGV 298
+ D N+RIQ+ PD F +FG GS +G+F+ +
Sbjct: 1155 WVTLVIKSLFLGQLKEPHGQVYIADRDNHRIQVLNPDLTFSHSFGSEGSANGQFQYPTDI 1214
Query: 299 AVMSNGNILVCDRENHRIQVF 319
A+ S G + V D ENHRIQ F
Sbjct: 1215 AIDSQGLVYVTDSENHRIQKF 1235
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 126/257 (49%), Gaps = 28/257 (10%)
Query: 51 EPGCFTWPRGIAVGPDNS-----------IVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
EP F P G+AV DN I + D RV+ F F +
Sbjct: 829 EP-VFNRPWGVAVSDDNQHVIVTENNGNGITILDGERKRVK----SFGATRRNRSFQFFY 883
Query: 100 PRGIAVGPDNSIVVADSSNHRVQ-VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNR 157
P G+A DN I+V D NHR+Q V +DG + G G++ Q +P I +S T +
Sbjct: 884 PSGVAFTSDNFILVTDG-NHRLQKVRMADGKSIASVGRTGSEPLQFAYPAGIVISPITEQ 942
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
V ++D+ N+ + + + T +L +P +AV++ N VI++++
Sbjct: 943 VYIADAANNCDTSLAIPINPYLDNIT-------PARTITELYYPWGVAVTDDNHVIITET 995
Query: 218 NNHRVQIFDVNGRVITSFGSEG--SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
N + V I D G+ + SFG EG S GQ ++PR +A+D QG + V DS N+RIQ F+PD
Sbjct: 996 NGNCVTILDREGKKVKSFGGEGGRSANGQFQYPRDIAIDSQGLVYVADSYNHRIQKFSPD 1055
Query: 276 GQFLRAFGCWGSGDGEF 292
G+F+ F G G G+
Sbjct: 1056 GKFVGQFDNKGFGPGQL 1072
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 84/165 (50%), Gaps = 23/165 (13%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------A 96
GS GS G F +P IA+ + V DS NHR+Q F L N +
Sbjct: 1199 GSEGSANGQFQYPTDIAIDSQGLVYVTDSENHRIQ----KFTLNGNLMVQFGTYGSGPGE 1254
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
+P GI + ++ +AD+ NHR+QV D TF FGS G+ GQ +HP+ I + +
Sbjct: 1255 LKYPVGITI---DTADIADNGNHRIQVLNPDLTFSHSFGSKGSANGQFKHPNGIVIDSQG 1311
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP 201
V V+DS+NHR+Q F DG F G+FG+ G+ GQL P
Sbjct: 1312 LVYVTDSHNHRIQ-------KFSPDGKFTGQFGTYGSSPGQLSIP 1349
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 116/228 (50%), Gaps = 12/228 (5%)
Query: 97 FTWPRGIAVGPDNS-IVVADSSNHRVQVFQSDGTFVGKFGSMG-NKAGQLEHPHYIAVSN 154
F P G+AV DN ++V +++ + + + + V FG+ N++ Q +P +A ++
Sbjct: 832 FNRPWGVAVSDDNQHVIVTENNGNGITILDGERKRVKSFGATRRNRSFQFFYPSGVAFTS 891
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVI 213
N ++V+D NHR+Q +V +DG + G G++ Q +P I +S T +V
Sbjct: 892 DNFILVTD-GNHRLQ------KVRMADGKSIASVGRTGSEPLQFAYPAGIVISPITEQVY 944
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
++D+ N+ + + +L +P GVAV D ++ + ++ N + I
Sbjct: 945 IADAANNCDTSLAIPINPYLDNITPARTITELYYPWGVAVTDDNHVIITETNGNCVTILD 1004
Query: 274 PDGQFLRAFGCWG--SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G+ +++FG G S +G+F+ +A+ S G + V D NHRIQ F
Sbjct: 1005 REGKKVKSFGGEGGRSANGQFQYPRDIAIDSQGLVYVADSYNHRIQKF 1052
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 59/145 (40%), Gaps = 32/145 (22%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F PRGIA+ + VAD NHR+Q F DG FVG+FG+ G+ GQL P+
Sbjct: 30 FHSPRGIAIDSQGLVYVADEYNHRIQKFSPDGKFVGQFGTRGSGPGQLNRPN-------- 81
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
VF SD FV KFGS N L +P + + V D
Sbjct: 82 --------------------VFTSDDVFVSKFGSKDN----LCNPIGLTFDKDGLLYVCD 117
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSE 241
R+ F R I S+ +
Sbjct: 118 IGTKRLLAFKWFDRSIGDLESDTQQ 142
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 11/77 (14%)
Query: 227 VNGRVITSFGSE-----------GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
++G +I S G + GS GQ PRG+A+D QG + V D N+RIQ F+PD
Sbjct: 1 MDGYLIASVGEDRSGALQFNYPHGSANGQFHSPRGIAIDSQGLVYVADEYNHRIQKFSPD 60
Query: 276 GQFLRAFGCWGSGDGEF 292
G+F+ FG GSG G+
Sbjct: 61 GKFVGQFGTRGSGPGQL 77
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 58/135 (42%), Gaps = 32/135 (23%)
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+ GQ P IA+ + V V+D NHR+Q F DG FVG+FG+ G+ GQ
Sbjct: 24 GSANGQFHSPRGIAIDSQGLVYVADEYNHRIQ-------KFSPDGKFVGQFGTRGSGPGQ 76
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
L P+ +F + ++ FGS+ + L P G+ D G
Sbjct: 77 LNRPN---------------------VFTSDDVFVSKFGSKDN----LCNPIGLTFDKDG 111
Query: 258 YISVGDSGNNRIQIF 272
+ V D G R+ F
Sbjct: 112 LLYVCDIGTKRLLAF 126
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 25/128 (19%)
Query: 192 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGV 251
G+ GQ P IA+ + V V+D NHR+Q F +G+ + FG+ GS GQL
Sbjct: 24 GSANGQFHSPRGIAIDSQGLVYVADEYNHRIQKFSPDGKFVGQFGTRGSGPGQL------ 77
Query: 252 AVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDR 311
NR +FT D F+ F GS D + G+ +G + VCD
Sbjct: 78 ---------------NRPNVFTSDDVFVSKF---GSKDNLCNPI-GLTFDKDGLLYVCDI 118
Query: 312 ENHRIQVF 319
R+ F
Sbjct: 119 GTKRLLAF 126
>gi|321479081|gb|EFX90037.1| hypothetical protein DAPPUDRAFT_300091 [Daphnia pulex]
Length = 708
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 124/229 (54%), Gaps = 6/229 (2%)
Query: 96 AFTWPRGIAVGP-DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F P GIA I V D + +QVF +G +V + G G G P IAV
Sbjct: 481 TFLCPFGIAFSTVAEEIYVTDKWLNCIQVFNKEGVYVRQIGVKGTSPGHFRSPEGIAVDF 540
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ---LEHPHYIAVS-NTN 210
+ V D+ N RVQ+ D NG F+ G V G K Q P +AVS + +
Sbjct: 541 KGNIYVCDTCNDRVQVLDRNGVYFRELG-VVSPMTLPGGKLYQKREFSEPTGVAVSPDGS 599
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
R+ V D N R+++F NG ++ FG G++ GQ + P +AVDDQG+I VGD+GN RIQ
Sbjct: 600 RIAVCDFGNCRIKVFGSNGELLVVFGFRGTQRGQFQHPECLAVDDQGFILVGDNGNGRIQ 659
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
IF P+G F+R+ G GSG G+F + G+ + + +I+ D +NH IQ+F
Sbjct: 660 IFRPNGNFVRSLGSKGSGPGQFNWISGLTLSKDRDIIATDFKNHCIQIF 708
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 98/203 (48%), Gaps = 34/203 (16%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------- 95
+IG +G+ PG F P GIAV +I V D+ N RVQV L N V+
Sbjct: 519 QIGVKGTSPGHFRSPEGIAVDFKGNIYVCDTCNDRVQV------LDRNGVYFRELGVVSP 572
Query: 96 ------------AFTWPRGIAVGPDNS-IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
F+ P G+AV PD S I V D N R++VF S+G + FG G + G
Sbjct: 573 MTLPGGKLYQKREFSEPTGVAVSPDGSRIAVCDFGNCRIKVFGSNGELLVVFGFRGTQRG 632
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
Q +HP +AV + ++V D+ N R+QIF N G FV GS G+ GQ
Sbjct: 633 QFQHPECLAVDDQGFILVGDNGNGRIQIFRPN-------GNFVRSLGSKGSGPGQFNWIS 685
Query: 203 YIAVSNTNRVIVSDSNNHRVQIF 225
+ +S +I +D NH +QIF
Sbjct: 686 GLTLSKDRDIIATDFKNHCIQIF 708
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 30/206 (14%)
Query: 144 LEHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVFQSDG---------------TFV-G 186
L+ P +AVS T+ V+ +++HRV + D +G++ +S G TF G
Sbjct: 409 LQRPAGVAVSPWTSETYVAATDSHRVYVIDKSGKIVKSLGSPYRSNDRLGGGTADTFTNG 468
Query: 187 KFGSMGNKA--GQLEHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
+ + A G P IA S + V+D + +Q+F+ G + G +G+ G
Sbjct: 469 ATTTSASNANCGTFLCPFGIAFSTVAEEIYVTDKWLNCIQVFNKEGVYVRQIGVKGTSPG 528
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGS---------GDGEFKG 294
+ P G+AVD +G I V D+ N+R+Q+ +G + R G EF
Sbjct: 529 HFRSPEGIAVDFKGNIYVCDTCNDRVQVLDRNGVYFRELGVVSPMTLPGGKLYQKREFSE 588
Query: 295 LEGVAVMSNGN-ILVCDRENHRIQVF 319
GVAV +G+ I VCD N RI+VF
Sbjct: 589 PTGVAVSPDGSRIAVCDFGNCRIKVF 614
>gi|321477881|gb|EFX88839.1| hypothetical protein DAPPUDRAFT_304797 [Daphnia pulex]
Length = 496
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 145/290 (50%), Gaps = 31/290 (10%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-------------CFPHFDLKT 90
+IG RG G F+ P+ I P I+ DS+N VQV C +
Sbjct: 211 RIGCRGRAKGQFSNPQDIVAFP-GRILATDSNNQCVQVFNVKKNDNDLQFGCLGRLAIDR 269
Query: 91 NCVFLAFTWPRGIAVGPD-NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
+ P GIA P+ + +VAD N + VF+ G FV +FG G+L+ P
Sbjct: 270 GRLLGQIQRPTGIASMPEKDQFIVADYENRWMSVFEMKGKFVSRFG-----MGKLQGPKG 324
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
+AV ++ V D+ + +F NGR FVG+FGS G L PH+I +++
Sbjct: 325 VAVDGKGKIYVVDNKASAICVFSTNGR-------FVGRFGSRGVGEDHLAGPHFIGINSF 377
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
+VSD +NH V++FD G+ + SFG G E+GQ P GVA+D I VGD GN+R+
Sbjct: 378 GHSVVSDFHNHAVKVFDSTGQYLYSFGCNGEEDGQFNAPTGVAIDPFDNILVGDWGNSRV 437
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
Q+F G FL+ C + G +G++ + +G + V D NH I+V+
Sbjct: 438 QVFDRQGTFLQ---CINTSSDPLYGPQGLS-LCDGMLYVADSGNHCIKVY 483
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 34 QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV 93
QYL + G G E G F P G+A+ P ++I+V D N RVQV F C+
Sbjct: 398 QYL------YSFGCNGEEDGQFNAPTGVAIDPFDNILVGDWGNSRVQV-FDRQGTFLQCI 450
Query: 94 FLA---FTWPRGIAVGPDNSIVVADSSNHRVQVFQSD 127
+ P+G+++ D + VADS NH ++V++ D
Sbjct: 451 NTSSDPLYGPQGLSLC-DGMLYVADSGNHCIKVYRYD 486
>gi|170593113|ref|XP_001901309.1| B-box zinc finger family protein [Brugia malayi]
gi|158591376|gb|EDP29989.1| B-box zinc finger family protein [Brugia malayi]
Length = 972
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 123/226 (54%), Gaps = 14/226 (6%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P GI I+VAD SN+R+Q+F +G F+ KFGS G + GQ + P IA N
Sbjct: 655 FCRPWGICCDNKGRILVADRSNNRIQIFDKEGNFLHKFGSPGTRPGQFDRPAGIA----N 710
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++V+D +NHRVQ VF G F+ KFG G G +P +AV++ N++ VSD
Sbjct: 711 EIVVADKDNHRVQ-------VFSERGDFLLKFGERGRTPGLFNYPWGVAVNSFNQIAVSD 763
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKF--PRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ NHRVQ+F G I FG + S F PRGV G + + D N+R+ + +
Sbjct: 764 TRNHRVQMFSPQGHFIRKFGFDSSLYNYKNFDSPRGVCYLHDGQLVITDFNNHRLVMMSS 823
Query: 275 DGQF-LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G ++ +G G +G F +G+ + G+ILVCD N+RIQV
Sbjct: 824 RGTVDMKMYGGEGDSEGSFCRPQGITTDNEGHILVCDSRNNRIQVL 869
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 137/262 (52%), Gaps = 34/262 (12%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------- 95
F GS GS G F P GI I+VAD SN+R+Q+ FD + N FL
Sbjct: 643 FSFGSEGSADGQFCRPWGICCDNKGRILVADRSNNRIQI----FDKEGN--FLHKFGSPG 696
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
F P GIA N IVVAD NHRVQVF G F+ KFG G G +P +A
Sbjct: 697 TRPGQFDRPAGIA----NEIVVADKDNHRVQVFSERGDFLLKFGERGRTPGLFNYPWGVA 752
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG---SMGNKAGQLEHPHYIAVSN 208
V++ N++ VSD+ NHRVQ+F G F+ KFG S+ N + P + +
Sbjct: 753 VNSFNQIAVSDTRNHRVQMFSPQGH-------FIRKFGFDSSLYNYKN-FDSPRGVCYLH 804
Query: 209 TNRVIVSDSNNHRVQIFDVNGRV-ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+++++D NNHR+ + G V + +G EG EG P+G+ D++G+I V DS NN
Sbjct: 805 DGQLVITDFNNHRLVMMSSRGTVDMKMYGGEGDSEGSFCRPQGITTDNEGHILVCDSRNN 864
Query: 268 RIQIFTPDG-QFLRAFGCWGSG 288
RIQ+ DG Q + +FG G G
Sbjct: 865 RIQVLNLDGMQCVASFGGAGLG 886
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 106/186 (56%), Gaps = 15/186 (8%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FGS G+ GQ P I N R++V+D +N+R+QIFD +G F+ KFGS G
Sbjct: 645 FGSEGSADGQFCRPWGICCDNKGRILVADRSNNRIQIFD-------KEGNFLHKFGSPGT 697
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
+ GQ + P IA N ++V+D +NHRVQ+F G + FG G G +P GVAV
Sbjct: 698 RPGQFDRPAGIA----NEIVVADKDNHRVQVFSERGDFLLKFGERGRTPGLFNYPWGVAV 753
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE---GVAVMSNGNILVCD 310
+ I+V D+ N+R+Q+F+P G F+R FG + S +K + GV + +G +++ D
Sbjct: 754 NSFNQIAVSDTRNHRVQMFSPQGHFIRKFG-FDSSLYNYKNFDSPRGVCYLHDGQLVITD 812
Query: 311 RENHRI 316
NHR+
Sbjct: 813 FNNHRL 818
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 73/132 (55%), Gaps = 4/132 (3%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FGS G+ GQ P I N R++V+D +N+R+QIFD G + FGS G+ GQ
Sbjct: 645 FGSEGSADGQFCRPWGICCDNKGRILVADRSNNRIQIFDKEGNFLHKFGSPGTRPGQFDR 704
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+A + I V D N+R+Q+F+ G FL FG G G F GVAV S I
Sbjct: 705 PAGIANE----IVVADKDNHRVQVFSERGDFLLKFGERGRTPGLFNYPWGVAVNSFNQIA 760
Query: 308 VCDRENHRIQVF 319
V D NHR+Q+F
Sbjct: 761 VSDTRNHRVQMF 772
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 66/173 (38%), Gaps = 36/173 (20%)
Query: 181 DGTFVGKFGSMGN-KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
D TF+ K S+G ++G +I R I VQ D G TS +
Sbjct: 512 DSTFISKLRSLGELESGACAQTTHIIGEGYKRAIRDRLCTILVQTRDACGDACTSTNHQM 571
Query: 240 SEEGQLKFPRGVAVD------DQGYISVG----DSGNNRIQIF--------TPDGQFLR- 280
S L P G VD D G S+ D GN+ + I P + R
Sbjct: 572 S--ASLLSPEGRIVDIRIEEQDGGIYSLAYFPTDEGNHFLDIKIRGVSICGCPTVIYARK 629
Query: 281 --------------AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+FG GS DG+F G+ + G ILV DR N+RIQ+F
Sbjct: 630 GRNYGTIARTGPLFSFGSEGSADGQFCRPWGICCDNKGRILVADRSNNRIQIF 682
>gi|223940572|ref|ZP_03632418.1| NHL repeat containing protein [bacterium Ellin514]
gi|223890764|gb|EEF57279.1| NHL repeat containing protein [bacterium Ellin514]
Length = 791
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 158/314 (50%), Gaps = 30/314 (9%)
Query: 19 LLVSGIGQVGTTPRS---QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSS 75
LLV+G +T RS ++ + ++ IG+RG+ G F PR +AV +++ V D +
Sbjct: 478 LLVTGCSGSNSTERSIESKFFSRVQV---IGTRGAGIGEFNKPRSVAVDKQDNLYVVDMT 534
Query: 76 NHRVQVCFPHFDLKTNCVFLAFTW---------PRGIAVGPDNSIVVADSSNHRVQVFQS 126
RVQ P FL F W P+G+ + +IVV + RV F
Sbjct: 535 G-RVQKFSPEGK------FLLF-WQMPQTDLGKPKGMCCDKEGNIVVLEPHYQRVNHFSP 586
Query: 127 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN-HRVQIFDVNGRVFQSDGTFV 185
+G + ++GS G A QL P +AV++ N V+V++ RVQ F G+ +
Sbjct: 587 EGKLIAQWGSHGTNASQLTLPRCVAVNSHNDVLVTEYTLVDRVQQFSARGQ------KLI 640
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL 245
FG G K G+ P + V ++R+ ++DS NHR+Q+F G+ + ++G G+ G++
Sbjct: 641 NCFGQAGEKNGEFNRPEGMDVDASDRMYIADSCNHRIQVFSAEGKWLRTYGKAGTGLGEM 700
Query: 246 KFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
+P + VD G V + GN+RIQIF + + L G G GEF +A S GN
Sbjct: 701 SYPYDIRVDKAGRQYVCEFGNSRIQIFDANDKPLEVLGGVGGAPGEFSNPWSIAFDSKGN 760
Query: 306 ILVCDRENHRIQVF 319
+ V D +NHR+Q F
Sbjct: 761 LYVADSQNHRVQKF 774
>gi|423555305|ref|ZP_17531608.1| hypothetical protein II3_00510 [Bacillus cereus MC67]
gi|401196709|gb|EJR03647.1| hypothetical protein II3_00510 [Bacillus cereus MC67]
Length = 617
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 163/346 (47%), Gaps = 62/346 (17%)
Query: 30 TPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC------- 82
+P QY+Q IG+ G G P+GIA+ + I +AD+ N+R+QV
Sbjct: 168 SPDGQYIQT------IGNYGKANGELALPQGIAINKQDEIYIADTYNNRIQVFDKNGEFQ 221
Query: 83 --------------FPH-----FDLKTNCVFLAFTWPRGIA------------------- 104
F H FD + +++A T+ I
Sbjct: 222 RVIGNGIAGLGPYQFYHPRGINFDSISGSLYVADTYNNRIMKFTNKDQFLYTVGNFFQFV 281
Query: 105 ----VGPDN--SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG---QLEHPHYIAVSNT 155
V PD +I + D+ N+RV ++ G +GN+ Q P+ +
Sbjct: 282 YLNQVLPDGQGNIYITDTGNNRVLLYNEVGLTAIMKKIIGNERSGNTQYSGPYDVERDTN 341
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG--NKAGQLEHPHYIAVSNTNRVI 213
V VSDS NHR+ +D++G++ G+ G G +G + GQ P IA+ N V
Sbjct: 342 GNVFVSDSFNHRILKYDISGKIVGKWGSLFGAGGPLGFGSLPGQFFVPRQIAMDRYNNVY 401
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
VSDS NHR+Q F +G V+ S+GS G G +FP G+A+D +G I + DS NNRIQ F
Sbjct: 402 VSDSVNHRIQKFTNSGIVLASYGSFGVLPGFFQFPSGIAIDSKGNIFIADSENNRIQKFN 461
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
P +++ +G GSG+GEF +A+ S N+ V DR N+RIQ F
Sbjct: 462 PFFVYMKEWGRKGSGEGEFSQPMQLAIDSKDNVYVVDRINNRIQKF 507
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 141/281 (50%), Gaps = 18/281 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTW 99
IG+ G PG F P GIAV + +I+VAD++N+R+Q F + F++
Sbjct: 83 IGTLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNDQFQFIKSWGTKGQGNEQFSF 142
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PR IAV DN+ + D NHR+Q + DG ++ G+ G G+L P IA++ + +
Sbjct: 143 PREIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGNYGKANGELALPQGIAINKQDEIY 202
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDSN 218
++D+ N+R+Q+FD NG + G + G Q HP I S + + V+D+
Sbjct: 203 IADTYNNRIQVFDKNGEFQRVIGNGIAGLGPY-----QFYHPRGINFDSISGSLYVADTY 257
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ- 277
N+R+ F + + + G+ Q + V D QG I + D+GNNR+ ++ G
Sbjct: 258 NNRIMKFTNKDQFLYTVGN----FFQFVYLNQVLPDGQGNIYITDTGNNRVLLYNEVGLT 313
Query: 278 --FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+ G SG+ ++ G V +NGN+ V D NHRI
Sbjct: 314 AIMKKIIGNERSGNTQYSGPYDVERDTNGNVFVSDSFNHRI 354
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 41/305 (13%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL------KTNCVFLA-- 96
IG+ S ++ P + + ++ V+DS NHR+ +D+ K +F A
Sbjct: 320 IGNERSGNTQYSGPYDVERDTNGNVFVSDSFNHRIL----KYDISGKIVGKWGSLFGAGG 375
Query: 97 ----------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH 146
F PR IA+ N++ V+DS NHR+Q F + G + +GS G G +
Sbjct: 376 PLGFGSLPGQFFVPRQIAMDRYNNVYVSDSVNHRIQKFTNSGIVLASYGSFGVLPGFFQF 435
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
P IA+ + + ++DS N+R+Q F+ F ++ ++G G+ G+ P +A+
Sbjct: 436 PSGIAIDSKGNIFIADSENNRIQKFN---PFF----VYMKEWGRKGSGEGEFSQPMQLAI 488
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGS----------EGSEEG--QLKFPRGVAVD 254
+ + V V D N+R+Q FD +G+ +T +G+ E EG L P G+ +D
Sbjct: 489 DSKDNVYVVDRINNRIQKFDNDGKFLTKWGTNHGAGNLDPLENWREGPGDLFLPIGIEID 548
Query: 255 DQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+ V D+ NNR+ I+ +G FL +FG + G+F +G+ V S GNI++ D
Sbjct: 549 INNTVYVTDTSNNRVNIYNENGIFLESFGSFNGMSGQFFSPQGIDVDSQGNIIITDGLLQ 608
Query: 315 RIQVF 319
RIQ F
Sbjct: 609 RIQFF 613
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 114/223 (51%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A + V D N+RV +G V G++G GQ P IAV ++
Sbjct: 49 PVAMARDAKGFLYVVDMGNNRVVKIDKNGEVVDAIGTLGEGPGQFNMPFGIAVDKEGNIL 108
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ N+R+Q F+ FQ F+ +G+ G Q P IAV + N ++D N
Sbjct: 109 VADTANYRIQKFN---DQFQ----FIKSWGTKGQGNEQFSFPREIAVDSDNNYYITDEYN 161
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HR+Q + +G+ I + G+ G G+L P+G+A++ Q I + D+ NNRIQ+F +G+F
Sbjct: 162 HRIQKYSPDGQYIQTIGNYGKANGELALPQGIAINKQDEIYIADTYNNRIQVFDKNGEFQ 221
Query: 280 RAF--GCWGSGDGEFKGLEGVAVMS-NGNILVCDRENHRIQVF 319
R G G G +F G+ S +G++ V D N+RI F
Sbjct: 222 RVIGNGIAGLGPYQFYHPRGINFDSISGSLYVADTYNNRIMKF 264
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+V +GS + + L P +A + V D N+RV D NG V V G
Sbjct: 32 YVKSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRVVKIDKNGEV-------VDAIG 84
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
++G GQ P IAV ++V+D+ N+R+Q F+ + I S+G++G Q FPR
Sbjct: 85 TLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNDQFQFIKSWGTKGQGNEQFSFPR 144
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+AVD + D N+RIQ ++PDGQ+++ G +G +GE +G+A+ I +
Sbjct: 145 EIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGNYGKANGELALPQGIAINKQDEIYIA 204
Query: 310 DRENHRIQVF 319
D N+RIQVF
Sbjct: 205 DTYNNRIQVF 214
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+ + S+GSE L+ P +A D +G++ V D GNNR+ +G+ + A G G G
Sbjct: 31 KYVKSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRVVKIDKNGEVVDAIGTLGEGP 90
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F G+AV GNILV D N+RIQ F
Sbjct: 91 GQFNMPFGIAVDKEGNILVADTANYRIQKF 120
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 17/87 (19%)
Query: 52 PGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----------FTWP 100
PG P GI + +N++ V D+SN+RV + N +FL F P
Sbjct: 536 PGDLFLPIGIEIDINNTVYVTDTSNNRVNIY------NENGIFLESFGSFNGMSGQFFSP 589
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSD 127
+GI V +I++ D R+Q F+ +
Sbjct: 590 QGIDVDSQGNIIITDGLLQRIQFFKKE 616
>gi|393911596|gb|EJD76381.1| B-box zinc finger family protein [Loa loa]
Length = 956
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 122/226 (53%), Gaps = 14/226 (6%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P GI I+VAD SN+RVQ+F +G F+ KFGS G + GQ + P I TN
Sbjct: 650 FCRPWGICCDNKGRIIVADRSNNRVQIFDKEGNFLHKFGSPGTRPGQFDRPAGI----TN 705
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++V+D +NHRVQ VF G F+ KFG G G +P +AV++ N++ VSD
Sbjct: 706 EIVVADKDNHRVQ-------VFSERGDFLLKFGERGRTPGLFNYPWGVAVNSFNQIAVSD 758
Query: 217 SNNHRVQIFDVNGRVITSFGSEGS--EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ NHRVQ+F G I FG + S L PRGV G + + D N+R+ + +
Sbjct: 759 TRNHRVQMFSPQGHFIRKFGFDNSLYNYKNLDSPRGVCFLHDGQLVITDFNNHRLVVMSS 818
Query: 275 DGQF-LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G ++ +G G +G F +G+ + +ILVCD N+RIQV
Sbjct: 819 RGTVDMKMYGSEGDNEGSFCRPQGITTDNEEHILVCDSRNNRIQVL 864
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 137/270 (50%), Gaps = 38/270 (14%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------- 95
F GS GS G F P GI I+VAD SN+RVQ+ FD + N FL
Sbjct: 638 FSFGSEGSADGQFCRPWGICCDNKGRIIVADRSNNRVQI----FDKEGN--FLHKFGSPG 691
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
F P GI N IVVAD NHRVQVF G F+ KFG G G +P +A
Sbjct: 692 TRPGQFDRPAGIT----NEIVVADKDNHRVQVFSERGDFLLKFGERGRTPGLFNYPWGVA 747
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG---SMGNKAGQLEHPHYIAVSN 208
V++ N++ VSD+ NHRVQ+F G F+ KFG S+ N L+ P + +
Sbjct: 748 VNSFNQIAVSDTRNHRVQMFSPQGH-------FIRKFGFDNSLYNYKN-LDSPRGVCFLH 799
Query: 209 TNRVIVSDSNNHRVQIFDVNGRV-ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+++++D NNHR+ + G V + +GSEG EG P+G+ D++ +I V DS NN
Sbjct: 800 DGQLVITDFNNHRLVVMSSRGTVDMKMYGSEGDNEGSFCRPQGITTDNEEHILVCDSRNN 859
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
RIQ+ + DG C S G GL G
Sbjct: 860 RIQVLSLDG-----MQCVASFGGVVPGLPG 884
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 15/189 (7%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FGS G+ GQ P I N R+IV+D +N+RVQIFD +G F+ KFGS G
Sbjct: 640 FGSEGSADGQFCRPWGICCDNKGRIIVADRSNNRVQIFD-------KEGNFLHKFGSPGT 692
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
+ GQ + P I TN ++V+D +NHRVQ+F G + FG G G +P GVAV
Sbjct: 693 RPGQFDRPAGI----TNEIVVADKDNHRVQVFSERGDFLLKFGERGRTPGLFNYPWGVAV 748
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE---GVAVMSNGNILVCD 310
+ I+V D+ N+R+Q+F+P G F+R FG + + +K L+ GV + +G +++ D
Sbjct: 749 NSFNQIAVSDTRNHRVQMFSPQGHFIRKFG-FDNSLYNYKNLDSPRGVCFLHDGQLVITD 807
Query: 311 RENHRIQVF 319
NHR+ V
Sbjct: 808 FNNHRLVVM 816
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLK---TNCV--FL 95
K G RG PG F +P G+AV N I V+D+ NHRVQ+ P HF K N + +
Sbjct: 728 LKFGERGRTPGLFNYPWGVAVNSFNQIAVSDTRNHRVQMFSPQGHFIRKFGFDNSLYNYK 787
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGK-FGSMGNKAGQLEHPHYIAVSN 154
PRG+ D +V+ D +NHR+ V S GT K +GS G+ G P I N
Sbjct: 788 NLDSPRGVCFLHDGQLVITDFNNHRLVVMSSRGTVDMKMYGSEGDNEGSFCRPQGITTDN 847
Query: 155 TNRVIVSDSNNHRVQIFDVNGR--VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
++V DS N+R+Q+ ++G V G G G G++A +A +
Sbjct: 848 EEHILVCDSRNNRIQVLSLDGMQCVASFGGVVPGLPGDTGSRADGESAITPLANMSAAHT 907
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V S++ ++ S + S+ L P + V G I V D G++ I+++
Sbjct: 908 TVKTSSSPQL-----------STSTNASQLSSLDRPTDLCVSPDGLIYVVDFGSSCIRVY 956
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 67/173 (38%), Gaps = 36/173 (20%)
Query: 181 DGTFVGKFGSMGN-KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
D TF+ K S+G ++G +I R I VQ D G TS +
Sbjct: 507 DNTFISKLRSLGELESGACARTTHIIGEGYKRAIRDRLCTILVQTRDACGDACTSTSHQV 566
Query: 240 SEEGQLKFPRGVAVD------DQGYISVG----DSGNNRIQIF--------TPDGQFLR- 280
S L P G A+D D G S+ D GN+ + I P + R
Sbjct: 567 S--ASLLSPEGRALDIRIAEQDGGIYSLTYFPIDEGNHFLDIKIRGVSICGCPTVIYARK 624
Query: 281 --------------AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+FG GS DG+F G+ + G I+V DR N+R+Q+F
Sbjct: 625 GRNYGTIARTGPLFSFGSEGSADGQFCRPWGICCDNKGRIIVADRSNNRVQIF 677
>gi|393911597|gb|EJD76382.1| B-box zinc finger family protein, variant [Loa loa]
Length = 688
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 122/226 (53%), Gaps = 14/226 (6%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P GI I+VAD SN+RVQ+F +G F+ KFGS G + GQ + P I TN
Sbjct: 382 FCRPWGICCDNKGRIIVADRSNNRVQIFDKEGNFLHKFGSPGTRPGQFDRPAGI----TN 437
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++V+D +NHRVQ VF G F+ KFG G G +P +AV++ N++ VSD
Sbjct: 438 EIVVADKDNHRVQ-------VFSERGDFLLKFGERGRTPGLFNYPWGVAVNSFNQIAVSD 490
Query: 217 SNNHRVQIFDVNGRVITSFGSEGS--EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ NHRVQ+F G I FG + S L PRGV G + + D N+R+ + +
Sbjct: 491 TRNHRVQMFSPQGHFIRKFGFDNSLYNYKNLDSPRGVCFLHDGQLVITDFNNHRLVVMSS 550
Query: 275 DGQF-LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G ++ +G G +G F +G+ + +ILVCD N+RIQV
Sbjct: 551 RGTVDMKMYGSEGDNEGSFCRPQGITTDNEEHILVCDSRNNRIQVL 596
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 137/270 (50%), Gaps = 38/270 (14%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------- 95
F GS GS G F P GI I+VAD SN+RVQ+ FD + N FL
Sbjct: 370 FSFGSEGSADGQFCRPWGICCDNKGRIIVADRSNNRVQI----FDKEGN--FLHKFGSPG 423
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
F P GI N IVVAD NHRVQVF G F+ KFG G G +P +A
Sbjct: 424 TRPGQFDRPAGIT----NEIVVADKDNHRVQVFSERGDFLLKFGERGRTPGLFNYPWGVA 479
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG---SMGNKAGQLEHPHYIAVSN 208
V++ N++ VSD+ NHRVQ+F G F+ KFG S+ N L+ P + +
Sbjct: 480 VNSFNQIAVSDTRNHRVQMFSPQGH-------FIRKFGFDNSLYNYK-NLDSPRGVCFLH 531
Query: 209 TNRVIVSDSNNHRVQIFDVNGRV-ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+++++D NNHR+ + G V + +GSEG EG P+G+ D++ +I V DS NN
Sbjct: 532 DGQLVITDFNNHRLVVMSSRGTVDMKMYGSEGDNEGSFCRPQGITTDNEEHILVCDSRNN 591
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
RIQ+ + DG C S G GL G
Sbjct: 592 RIQVLSLDG-----MQCVASFGGVVPGLPG 616
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 15/189 (7%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FGS G+ GQ P I N R+IV+D +N+RVQIFD +G F+ KFGS G
Sbjct: 372 FGSEGSADGQFCRPWGICCDNKGRIIVADRSNNRVQIFD-------KEGNFLHKFGSPGT 424
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
+ GQ + P I TN ++V+D +NHRVQ+F G + FG G G +P GVAV
Sbjct: 425 RPGQFDRPAGI----TNEIVVADKDNHRVQVFSERGDFLLKFGERGRTPGLFNYPWGVAV 480
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE---GVAVMSNGNILVCD 310
+ I+V D+ N+R+Q+F+P G F+R FG + + +K L+ GV + +G +++ D
Sbjct: 481 NSFNQIAVSDTRNHRVQMFSPQGHFIRKFG-FDNSLYNYKNLDSPRGVCFLHDGQLVITD 539
Query: 311 RENHRIQVF 319
NHR+ V
Sbjct: 540 FNNHRLVVM 548
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLK---TNCV--FL 95
K G RG PG F +P G+AV N I V+D+ NHRVQ+ P HF K N + +
Sbjct: 460 LKFGERGRTPGLFNYPWGVAVNSFNQIAVSDTRNHRVQMFSPQGHFIRKFGFDNSLYNYK 519
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGK-FGSMGNKAGQLEHPHYIAVSN 154
PRG+ D +V+ D +NHR+ V S GT K +GS G+ G P I N
Sbjct: 520 NLDSPRGVCFLHDGQLVITDFNNHRLVVMSSRGTVDMKMYGSEGDNEGSFCRPQGITTDN 579
Query: 155 TNRVIVSDSNNHRVQIFDVNGR--VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
++V DS N+R+Q+ ++G V G G G G++A +A +
Sbjct: 580 EEHILVCDSRNNRIQVLSLDGMQCVASFGGVVPGLPGDTGSRADGESAITPLANMSAAHT 639
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V S++ ++ S + S+ L P + V G I V D G++ I+++
Sbjct: 640 TVKTSSSPQL-----------STSTNASQLSSLDRPTDLCVSPDGLIYVVDFGSSCIRVY 688
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 67/173 (38%), Gaps = 36/173 (20%)
Query: 181 DGTFVGKFGSMGN-KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
D TF+ K S+G ++G +I R I VQ D G TS +
Sbjct: 239 DNTFISKLRSLGELESGACARTTHIIGEGYKRAIRDRLCTILVQTRDACGDACTSTSHQV 298
Query: 240 SEEGQLKFPRGVAVD------DQGYISVG----DSGNNRIQIF--------TPDGQFLR- 280
S L P G A+D D G S+ D GN+ + I P + R
Sbjct: 299 S--ASLLSPEGRALDIRIAEQDGGIYSLTYFPIDEGNHFLDIKIRGVSICGCPTVIYARK 356
Query: 281 --------------AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+FG GS DG+F G+ + G I+V DR N+R+Q+F
Sbjct: 357 GRNYGTIARTGPLFSFGSEGSADGQFCRPWGICCDNKGRIIVADRSNNRVQIF 409
>gi|291243535|ref|XP_002741656.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 929
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 141/282 (50%), Gaps = 20/282 (7%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW--- 99
KIG +G+ PG PRGIA+ ++ IVVAD N+R+QV F L + FT
Sbjct: 663 LKIGGKGTAPGKLCGPRGIAISHNDDIVVADRGNNRMQVFFRDGKLSHVFSYRNFTRKFD 722
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+A+ ++++D N V + DG + GS G L+ P +AV V
Sbjct: 723 PVGVAITNSEQLLISDYDNKHVLLCDYDGRIIRTIGS-----GILKGPWGVAVGRHGLVH 777
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D H V R F DGT V FG G G+ +P Y+AV+N + +IVSD
Sbjct: 778 VVDHPQHCV-------RTFSLDGTHVHTFGGKGEGPGEFNYPLYVAVNNRDNIIVSDYCY 830
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HRVQ+FD G + FG+ G +GQ P GVA + I V D +N++Q+F P+G F+
Sbjct: 831 HRVQVFDYRGTFLFDFGTHGDRQGQFYRPTGVACTQKDDIIVNDYLSNKVQLFKPNGSFV 890
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNG--NILVCDRENHRIQVF 319
R + + EG+A+ S + V D +H I+VF
Sbjct: 891 RHL---NNDSKWLECPEGIAIASEKPLRVAVVDSGHHCIKVF 929
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ GR G +G+ G+L PRG+A+ I V D GNNR+Q+F DG+ F +
Sbjct: 657 LEGRPFLKIGGKGTAPGKLCGPRGIAISHNDDIVVADRGNNRMQVFFRDGKLSHVFS-YR 715
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+ +F + GVA+ ++ +L+ D +N +
Sbjct: 716 NFTRKFDPV-GVAITNSEQLLISDYDNKHV 744
>gi|340377925|ref|XP_003387479.1| PREDICTED: RING finger protein nhl-1-like [Amphimedon
queenslandica]
Length = 753
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 144/296 (48%), Gaps = 64/296 (21%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT----- 98
+IG GS P F PRGIA+ PDN I+V+D NHR+Q K V++A T
Sbjct: 377 RIGKEGSGPLQFNTPRGIAITPDNFILVSD--NHRIQ--------KIRQVYVADTDNHRI 426
Query: 99 -WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV--SNT 155
P IA+ + +AD++NH +Q F ++G FV +FG+ G GQL P+ I + + T
Sbjct: 427 QSPYDIAIDSQGLVYIADNANHSIQKFSAEGKFVSQFGTCGFGPGQLNSPYGITIDTAAT 486
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE---------------- 199
V VS+ N+R+ VF SDG FV +FG G GQ +
Sbjct: 487 GLVYVSEHGNNRIS-------VFTSDGVFVNRFGRPGGSIGQFKGLYGLALDKNGFLIQK 539
Query: 200 ----------------------HPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVITSFG 236
P IA+S T +V ++D N R+Q+ + + SF
Sbjct: 540 ISPDGYRKASVGKKGDGPLQFHTPFGIAISPVTEQVYIADPGNRRIQVLNPDLTFSHSFD 599
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
EGS+ GQ ++P +A+D QG + V D N+ I F+PDG+F+ FG GSG G+
Sbjct: 600 GEGSDNGQFEYPCDIAIDSQGLVYVADYWNHLILKFSPDGKFVSQFGTEGSGPGQL 655
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 115/233 (49%), Gaps = 25/233 (10%)
Query: 84 PHFDLKTNC-VFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV------GKFGS 136
P+FD T P G+AV D+ +++ + V +G V G+ G
Sbjct: 321 PYFDNITPVRTITGLNRPWGVAVTDDDHVLITEYGGDCVTKLDREGMKVKLIRGKGRIGK 380
Query: 137 MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAG 196
G+ Q P IA++ N ++VSD NHR+Q +V+ +D
Sbjct: 381 EGSGPLQFNTPRGIAITPDNFILVSD--NHRIQKIR---QVYVAD-----------TDNH 424
Query: 197 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD- 255
+++ P+ IA+ + V ++D+ NH +Q F G+ ++ FG+ G GQL P G+ +D
Sbjct: 425 RIQSPYDIAIDSQGLVYIADNANHSIQKFSAEGKFVSQFGTCGFGPGQLNSPYGITIDTA 484
Query: 256 -QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
G + V + GNNRI +FT DG F+ FG G G+FKGL G+A+ NG ++
Sbjct: 485 ATGLVYVSEHGNNRISVFTSDGVFVNRFGRPGGSIGQFKGLYGLALDKNGFLI 537
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 78/168 (46%), Gaps = 29/168 (17%)
Query: 95 LAFTWPRGIAVGP-DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
L F P GIA+ P + +AD N R+QV D TF F G+ GQ E+P IA+
Sbjct: 558 LQFHTPFGIAISPVTEQVYIADPGNRRIQVLNPDLTFSHSFDGEGSDNGQFEYPCDIAID 617
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+ V V+D NH + F DG FV +FG+ G+ GQL P+
Sbjct: 618 SQGLVYVADYWNHLI-------LKFSPDGKFVSQFGTEGSGPGQLFSPY----------- 659
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISV 261
+F +G ++SFGSEGS GQ P G+A D G+ V
Sbjct: 660 ----------VFTSDGVFVSSFGSEGSNIGQFINPFGLAFDKNGFFYV 697
>gi|451981103|ref|ZP_21929480.1| hypothetical protein NITGR_360067 [Nitrospina gracilis 3/211]
gi|451761706|emb|CCQ90729.1| hypothetical protein NITGR_360067 [Nitrospina gracilis 3/211]
Length = 340
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 133/258 (51%), Gaps = 20/258 (7%)
Query: 52 PGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------AFTWPRG 102
PG F P G+AV + +I VAD+ HR+Q FD + + + F WP
Sbjct: 83 PGLFKGPFGVAVDKEGNIWVADTGCHRIQ----KFDPEGDFILEFGGEGYGQSKFYWPEA 138
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
I V P +++VAD+ NH ++ + DG F+ FG GN G ++ P +A + V+D
Sbjct: 139 ICVEPMGTVLVADTHNHCLKRYDEDGEFLLGFGFAGNFDGFMKFPTGLATDAEGNIYVAD 198
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
+N RVQIF+ +G F+ KFG G + G+ P + V ++V++ + +R+
Sbjct: 199 RDNQRVQIFN-------EEGQFLTKFGEYGFEEGRFNFPSDLTVRTDGTLLVAEKSQNRL 251
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q FD +G I SF G +GQ P +A D G++ V D+ NNRIQ F P+ F+ +
Sbjct: 252 QQFDRDGNFIASFCEYGKRDGQFNCPMAIAEDPYGFVFVVDTLNNRIQKFDPEMNFVSKW 311
Query: 283 GCWGSGDGEFKGLEGVAV 300
G G + +F+ G+ +
Sbjct: 312 GTIGREEKQFQNPSGIWL 329
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 130/265 (49%), Gaps = 25/265 (9%)
Query: 69 IVVADSSNHRVQVCFPHFDLKTNCVFL--------------AFTWPRGIAVGPDNSIVVA 114
+ VAD+ N R+Q FD +F F P G+AV + +I VA
Sbjct: 48 VWVADAGNDRIQ----KFDGNGRFLFEFGKPAGTRPPYRPGLFKGPFGVAVDKEGNIWVA 103
Query: 115 DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 174
D+ HR+Q F +G F+ +FG G + P I V V+V+D++NH ++ +D
Sbjct: 104 DTGCHRIQKFDPEGDFILEFGGEGYGQSKFYWPEAICVEPMGTVLVADTHNHCLKRYD-- 161
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
DG F+ FG GN G ++ P +A + V+D +N RVQIF+ G+ +T
Sbjct: 162 -----EDGEFLLGFGFAGNFDGFMKFPTGLATDAEGNIYVADRDNQRVQIFNEEGQFLTK 216
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
FG G EEG+ FP + V G + V + NR+Q F DG F+ +F +G DG+F
Sbjct: 217 FGEYGFEEGRFNFPSDLTVRTDGTLLVAEKSQNRLQQFDRDGNFIASFCEYGKRDGQFNC 276
Query: 295 LEGVAVMSNGNILVCDRENHRIQVF 319
+A G + V D N+RIQ F
Sbjct: 277 PMAIAEDPYGFVFVVDTLNNRIQKF 301
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 24/222 (10%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV--------- 93
+ G G F WP I V P +++VAD+ NH C +D +
Sbjct: 121 LEFGGEGYGQSKFYWPEAICVEPMGTVLVADTHNH----CLKRYDEDGEFLLGFGFAGNF 176
Query: 94 --FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
F+ F P G+A + +I VAD N RVQ+F +G F+ KFG G + G+ P +
Sbjct: 177 DGFMKF--PTGLATDAEGNIYVADRDNQRVQIFNEEGQFLTKFGEYGFEEGRFNFPSDLT 234
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V ++V++ + +R+Q FD DG F+ F G + GQ P IA
Sbjct: 235 VRTDGTLLVAEKSQNRLQQFD-------RDGNFIASFCEYGKRDGQFNCPMAIAEDPYGF 287
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
V V D+ N+R+Q FD ++ +G+ G EE Q + P G+ +
Sbjct: 288 VFVVDTLNNRIQKFDPEMNFVSKWGTIGREEKQFQNPSGIWL 329
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 95/181 (52%), Gaps = 13/181 (7%)
Query: 145 EHPHYIAVSNTN-RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN-----KAGQL 198
E P + V +T V V+D+ N R+Q FD NGR F+ +FG + G
Sbjct: 34 ERPKWADVDHTQLYVWVADAGNDRIQKFDGNGR-------FLFEFGKPAGTRPPYRPGLF 86
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
+ P +AV + V+D+ HR+Q FD G I FG EG + + +P + V+ G
Sbjct: 87 KGPFGVAVDKEGNIWVADTGCHRIQKFDPEGDFILEFGGEGYGQSKFYWPEAICVEPMGT 146
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
+ V D+ N+ ++ + DG+FL FG G+ DG K G+A + GNI V DR+N R+Q+
Sbjct: 147 VLVADTHNHCLKRYDEDGEFLLGFGFAGNFDGFMKFPTGLATDAEGNIYVADRDNQRVQI 206
Query: 319 F 319
F
Sbjct: 207 F 207
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 17/121 (14%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
K G G E G F +P + V D +++VA+ S +R+Q FD N F+A
Sbjct: 216 KFGEYGFEEGRFNFPSDLTVRTDGTLLVAEKSQNRLQ----QFDRDGN--FIASFCEYGK 269
Query: 97 ----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
F P IA P + V D+ N+R+Q F + FV K+G++G + Q ++P I +
Sbjct: 270 RDGQFNCPMAIAEDPYGFVFVVDTLNNRIQKFDPEMNFVSKWGTIGREEKQFQNPSGIWL 329
Query: 153 S 153
S
Sbjct: 330 S 330
>gi|423475876|ref|ZP_17452591.1| hypothetical protein IEO_01334 [Bacillus cereus BAG6X1-1]
gi|402434708|gb|EJV66745.1| hypothetical protein IEO_01334 [Bacillus cereus BAG6X1-1]
Length = 598
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 148/282 (52%), Gaps = 9/282 (3%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWPRG 102
G G P F PRGI + S+ VAD+ N+R+ + F + D L T F F +P
Sbjct: 208 GIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRI-MKFTNKDQFLYTVGNFFQFVYPNQ 266
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG---QLEHPHYIAVSNTNRVI 159
+ +I + D+ N+RV ++ G ++GN+ Q P+ + V
Sbjct: 267 VLPDGKGNIYITDTGNNRVLLYNEVGLTAVMKKTIGNERNGNTQYAGPYDVERDTNGNVF 326
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG--NKAGQLEHPHYIAVSNTNRVIVSDS 217
VSDS NHR+ +D++G+V G+ G G +G + GQ P IA N V VSDS
Sbjct: 327 VSDSFNHRILKYDISGKVVGKWGSLFGAGGPLGYGSLPGQFYVPRQIATDRYNNVYVSDS 386
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NHR+Q F +G + S+GS G G +FP G+A+D +G I + DS N+RIQ F P
Sbjct: 387 VNHRIQKFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKGNIFIADSENHRIQKFNPFFV 446
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+++ +G GSG+GEF +A+ S N+ V DR N+R+Q F
Sbjct: 447 YMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVDRINNRVQKF 488
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 143/281 (50%), Gaps = 18/281 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTW 99
IG+ G PG F P GIAV + +I+VAD++N+R+Q F + F++
Sbjct: 64 IGTLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSF 123
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PR IAV DN+ + D NHR+Q + +G ++ GS G G++ P IA++ + V
Sbjct: 124 PREIAVDSDNNYYITDEYNHRIQKYSPNGQYIQTIGSYGKANGEMALPQGIAINKQDEVY 183
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSN 218
++D+ N+R+Q+FD G + GT + G Q HP I +T+ + V+D+
Sbjct: 184 IADTYNNRIQVFDKKGEFKRVIGTGIAGLGPY-----QFYHPRGINFDSTSGSLYVADTY 238
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ- 277
N+R+ F + + + G+ Q +P V D +G I + D+GNNR+ ++ G
Sbjct: 239 NNRIMKFTNKDQFLYTVGN----FFQFVYPNQVLPDGKGNIYITDTGNNRVLLYNEVGLT 294
Query: 278 --FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+ G +G+ ++ G V +NGN+ V D NHRI
Sbjct: 295 AVMKKTIGNERNGNTQYAGPYDVERDTNGNVFVSDSFNHRI 335
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 142/295 (48%), Gaps = 41/295 (13%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL------KTNCVFLA------------ 96
+ P + + ++ V+DS NHR+ +D+ K +F A
Sbjct: 311 YAGPYDVERDTNGNVFVSDSFNHRIL----KYDISGKVVGKWGSLFGAGGPLGYGSLPGQ 366
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F PR IA N++ V+DS NHR+Q F + G + +GS G G + P IA+ +
Sbjct: 367 FYVPRQIATDRYNNVYVSDSVNHRIQKFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKG 426
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ ++DS NHR+Q F+ F ++ ++G G+ G+ P +A+ + + V V D
Sbjct: 427 NIFIADSENHRIQKFN---PFF----VYMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVD 479
Query: 217 SNNHRVQIFDVNGRVITSFGS----------EGSEEG--QLKFPRGVAVDDQGYISVGDS 264
N+RVQ FD G +T +G+ E EG L P G+ +D + V D+
Sbjct: 480 RINNRVQKFDNEGNFLTKWGTNHGAGNLDPLENWREGPGDLFLPIGIEIDINNTVYVTDT 539
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NNR+ I+ +G FL +FG + G+F +G+ V S GNI++ D RIQ F
Sbjct: 540 SNNRVNIYNENGDFLESFGSFSGITGQFFSPQGIDVDSQGNIIITDGLLQRIQFF 594
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 114/223 (51%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A + V D N+RV +G V G++G GQ P IAV ++
Sbjct: 30 PVAMARDAKGFLYVVDMGNNRVLKIDKNGEVVDTIGTLGEGPGQFNMPFGIAVDKEGNIL 89
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ N+R+Q F+ FQ F+ +G+ G + Q P IAV + N ++D N
Sbjct: 90 VADTANYRIQKFN---EEFQ----FIKSWGTKGKGSEQFSFPREIAVDSDNNYYITDEYN 142
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HR+Q + NG+ I + GS G G++ P+G+A++ Q + + D+ NNRIQ+F G+F
Sbjct: 143 HRIQKYSPNGQYIQTIGSYGKANGEMALPQGIAINKQDEVYIADTYNNRIQVFDKKGEFK 202
Query: 280 RAFGCWGSGDGEFKGLEGVAV---MSNGNILVCDRENHRIQVF 319
R G +G G ++ + ++G++ V D N+RI F
Sbjct: 203 RVIGTGIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRIMKF 245
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P GIAV + +I+VAD++N+R+Q F + F+ +G+ G + Q P IAV + N
Sbjct: 74 FNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSFPREIAVDSDN 133
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++D NHR+Q + NG+ Q+ GS G G++ P IA++ + V ++D
Sbjct: 134 NYYITDEYNHRIQKYSPNGQYIQT-------IGSYGKANGEMALPQGIAINKQDEVYIAD 186
Query: 217 SNNHRVQIFDVNG---RVITSFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIF 272
+ N+R+Q+FD G RVI + G G Q PRG+ D G + V D+ NNRI F
Sbjct: 187 TYNNRIQVFDKKGEFKRVIGT-GIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRIMKF 245
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
T QFL G + +F V GNI + D N+R+ ++
Sbjct: 246 TNKDQFLYTVGNF----FQFVYPNQVLPDGKGNIYITDTGNNRVLLY 288
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 133/297 (44%), Gaps = 42/297 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-----------LAFTWPRGI 103
F +P + +I + D+ N+RV + + ++ V + P +
Sbjct: 261 FVYPNQVLPDGKGNIYITDTGNNRVLL---YNEVGLTAVMKKTIGNERNGNTQYAGPYDV 317
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM---------GNKAGQLEHPHYIAVSN 154
+ ++ V+DS NHR+ + G VGK+GS+ G+ GQ P IA
Sbjct: 318 ERDTNGNVFVSDSFNHRILKYDISGKVVGKWGSLFGAGGPLGYGSLPGQFYVPRQIATDR 377
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
N V VSDS NHR+Q F + G + +GS G G + P IA+ + + +
Sbjct: 378 YNNVYVSDSVNHRIQ-------KFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKGNIFI 430
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+DS NHR+Q F+ + +G +GS EG+ P +A+D + + V D NNR+Q F
Sbjct: 431 ADSENHRIQKFNPFFVYMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVDRINNRVQKFDN 490
Query: 275 DGQFLRAFGC------------WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G FL +G W G G+ G+ + N + V D N+R+ ++
Sbjct: 491 EGNFLTKWGTNHGAGNLDPLENWREGPGDLFLPIGIEIDINNTVYVTDTSNNRVNIY 547
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+V +GS + + L P +A + V D N+RV D NG V V G
Sbjct: 13 YVKSWGSELDPSKLLRTPVAMARDAKGFLYVVDMGNNRVLKIDKNGEV-------VDTIG 65
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
++G GQ P IAV ++V+D+ N+R+Q F+ + I S+G++G Q FPR
Sbjct: 66 TLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSFPR 125
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+AVD + D N+RIQ ++P+GQ+++ G +G +GE +G+A+ + +
Sbjct: 126 EIAVDSDNNYYITDEYNHRIQKYSPNGQYIQTIGSYGKANGEMALPQGIAINKQDEVYIA 185
Query: 310 DRENHRIQVF 319
D N+RIQVF
Sbjct: 186 DTYNNRIQVF 195
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+ + S+GSE L+ P +A D +G++ V D GNNR+ +G+ + G G G
Sbjct: 12 KYVKSWGSELDPSKLLRTPVAMARDAKGFLYVVDMGNNRVLKIDKNGEVVDTIGTLGEGP 71
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F G+AV GNILV D N+RIQ F
Sbjct: 72 GQFNMPFGIAVDKEGNILVADTANYRIQKF 101
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 52 PGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD-LKTNCVFLAFTW----PRGIAVG 106
PG P GI + +N++ V D+SN+RV + + D L++ F T P+GI V
Sbjct: 517 PGDLFLPIGIEIDINNTVYVTDTSNNRVNIYNENGDFLESFGSFSGITGQFFSPQGIDVD 576
Query: 107 PDNSIVVADSSNHRVQVFQS 126
+I++ D R+Q F+
Sbjct: 577 SQGNIIITDGLLQRIQFFKK 596
>gi|423403476|ref|ZP_17380649.1| hypothetical protein ICW_03874 [Bacillus cereus BAG2X1-2]
gi|401648573|gb|EJS66168.1| hypothetical protein ICW_03874 [Bacillus cereus BAG2X1-2]
Length = 598
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 148/282 (52%), Gaps = 9/282 (3%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWPRG 102
G G P F PRGI + S+ VAD+ N+R+ + F + D L T F F +P
Sbjct: 208 GIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRI-MKFTNKDQFLYTVGNFFQFVYPNQ 266
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG---QLEHPHYIAVSNTNRVI 159
+ +I + D+ N+RV ++ G ++GN+ Q P+ + V
Sbjct: 267 VLPDGKGNIYITDTGNNRVLLYNEVGLTAVMKKTIGNERNGNTQYAGPYDVERDTNGNVF 326
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG--NKAGQLEHPHYIAVSNTNRVIVSDS 217
VSDS NHR+ +D++G+V G+ G G +G + GQ P IA N V VSDS
Sbjct: 327 VSDSFNHRILKYDISGKVVGKWGSLFGAGGPLGYGSLPGQFYVPRQIATDRYNNVYVSDS 386
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NHR+Q F +G + S+GS G G +FP G+A+D +G I + DS N+RIQ F P
Sbjct: 387 VNHRIQKFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKGNIFIADSENHRIQKFNPFFV 446
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+++ +G GSG+GEF +A+ S N+ V DR N+R+Q F
Sbjct: 447 YMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVDRINNRVQKF 488
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 143/281 (50%), Gaps = 18/281 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTW 99
IG+ G PG F P GIAV + +I+VAD++N+R+Q F + F++
Sbjct: 64 IGTLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSF 123
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PR IAV DN+ + D NHR+Q + +G ++ GS G G++ P IA++ + V
Sbjct: 124 PREIAVDSDNNYYITDEYNHRIQKYSPNGQYIQTIGSYGKANGEMALPQGIAINKQDEVY 183
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSN 218
++D+ N+R+Q+FD G + GT + G Q HP I +T+ + V+D+
Sbjct: 184 IADTYNNRIQVFDKKGEFKRVIGTGIAGLGPY-----QFYHPRGINFDSTSGSLYVADTY 238
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ- 277
N+R+ F + + + G+ Q +P V D +G I + D+GNNR+ ++ G
Sbjct: 239 NNRIMKFTNKDQFLYTVGN----FFQFVYPNQVLPDGKGNIYITDTGNNRVLLYNEVGLT 294
Query: 278 --FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+ G +G+ ++ G V +NGN+ V D NHRI
Sbjct: 295 AVMKKTIGNERNGNTQYAGPYDVERDTNGNVFVSDSFNHRI 335
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 142/295 (48%), Gaps = 41/295 (13%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL------KTNCVFLA------------ 96
+ P + + ++ V+DS NHR+ +D+ K +F A
Sbjct: 311 YAGPYDVERDTNGNVFVSDSFNHRIL----KYDISGKVVGKWGSLFGAGGPLGYGSLPGQ 366
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F PR IA N++ V+DS NHR+Q F + G + +GS G G + P IA+ +
Sbjct: 367 FYVPRQIATDRYNNVYVSDSVNHRIQKFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKG 426
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ ++DS NHR+Q F+ F ++ ++G G+ G+ P +A+ + + V V D
Sbjct: 427 NIFIADSENHRIQKFN---PFF----VYMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVD 479
Query: 217 SNNHRVQIFDVNGRVITSFGS----------EGSEEG--QLKFPRGVAVDDQGYISVGDS 264
N+RVQ FD G +T +G+ E EG L P G+ +D + V D+
Sbjct: 480 RINNRVQKFDNEGNFLTKWGTNHGAGNLDPLENWREGPGDLFLPIGIEIDINNTVYVTDT 539
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NNR+ I+ +G FL +FG + G+F +G+ V S GNI++ D RIQ F
Sbjct: 540 SNNRVNIYNENGDFLESFGSFSGISGQFFSPQGIDVDSQGNIIITDGLLQRIQFF 594
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 114/223 (51%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A + V D N+RV +G V G++G GQ P IAV ++
Sbjct: 30 PVAMARDAKGFLYVVDMGNNRVLKIDKNGEVVDTIGTLGEGPGQFNMPFGIAVDKEGNIL 89
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ N+R+Q F+ FQ F+ +G+ G + Q P IAV + N ++D N
Sbjct: 90 VADTANYRIQKFN---EEFQ----FIKSWGTKGKGSEQFSFPREIAVDSDNNYYITDEYN 142
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HR+Q + NG+ I + GS G G++ P+G+A++ Q + + D+ NNRIQ+F G+F
Sbjct: 143 HRIQKYSPNGQYIQTIGSYGKANGEMALPQGIAINKQDEVYIADTYNNRIQVFDKKGEFK 202
Query: 280 RAFGCWGSGDGEFKGLEGVAV---MSNGNILVCDRENHRIQVF 319
R G +G G ++ + ++G++ V D N+RI F
Sbjct: 203 RVIGTGIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRIMKF 245
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P GIAV + +I+VAD++N+R+Q F + F+ +G+ G + Q P IAV + N
Sbjct: 74 FNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSFPREIAVDSDN 133
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++D NHR+Q + NG+ Q+ GS G G++ P IA++ + V ++D
Sbjct: 134 NYYITDEYNHRIQKYSPNGQYIQT-------IGSYGKANGEMALPQGIAINKQDEVYIAD 186
Query: 217 SNNHRVQIFDVNG---RVITSFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIF 272
+ N+R+Q+FD G RVI + G G Q PRG+ D G + V D+ NNRI F
Sbjct: 187 TYNNRIQVFDKKGEFKRVIGT-GIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRIMKF 245
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
T QFL G + +F V GNI + D N+R+ ++
Sbjct: 246 TNKDQFLYTVGNF----FQFVYPNQVLPDGKGNIYITDTGNNRVLLY 288
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 133/297 (44%), Gaps = 42/297 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-----------LAFTWPRGI 103
F +P + +I + D+ N+RV + + ++ V + P +
Sbjct: 261 FVYPNQVLPDGKGNIYITDTGNNRVLL---YNEVGLTAVMKKTIGNERNGNTQYAGPYDV 317
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM---------GNKAGQLEHPHYIAVSN 154
+ ++ V+DS NHR+ + G VGK+GS+ G+ GQ P IA
Sbjct: 318 ERDTNGNVFVSDSFNHRILKYDISGKVVGKWGSLFGAGGPLGYGSLPGQFYVPRQIATDR 377
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
N V VSDS NHR+Q F + G + +GS G G + P IA+ + + +
Sbjct: 378 YNNVYVSDSVNHRIQ-------KFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKGNIFI 430
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+DS NHR+Q F+ + +G +GS EG+ P +A+D + + V D NNR+Q F
Sbjct: 431 ADSENHRIQKFNPFFVYMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVDRINNRVQKFDN 490
Query: 275 DGQFLRAFGC------------WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G FL +G W G G+ G+ + N + V D N+R+ ++
Sbjct: 491 EGNFLTKWGTNHGAGNLDPLENWREGPGDLFLPIGIEIDINNTVYVTDTSNNRVNIY 547
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+V +GS + + L P +A + V D N+RV D NG V V G
Sbjct: 13 YVKSWGSELDPSKLLRTPVAMARDAKGFLYVVDMGNNRVLKIDKNGEV-------VDTIG 65
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
++G GQ P IAV ++V+D+ N+R+Q F+ + I S+G++G Q FPR
Sbjct: 66 TLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSFPR 125
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+AVD + D N+RIQ ++P+GQ+++ G +G +GE +G+A+ + +
Sbjct: 126 EIAVDSDNNYYITDEYNHRIQKYSPNGQYIQTIGSYGKANGEMALPQGIAINKQDEVYIA 185
Query: 310 DRENHRIQVF 319
D N+RIQVF
Sbjct: 186 DTYNNRIQVF 195
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+ + S+GSE L+ P +A D +G++ V D GNNR+ +G+ + G G G
Sbjct: 12 KYVKSWGSELDPSKLLRTPVAMARDAKGFLYVVDMGNNRVLKIDKNGEVVDTIGTLGEGP 71
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F G+AV GNILV D N+RIQ F
Sbjct: 72 GQFNMPFGIAVDKEGNILVADTANYRIQKF 101
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 52 PGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD-LKTNCVFLA----FTWPRGIAVG 106
PG P GI + +N++ V D+SN+RV + + D L++ F F P+GI V
Sbjct: 517 PGDLFLPIGIEIDINNTVYVTDTSNNRVNIYNENGDFLESFGSFSGISGQFFSPQGIDVD 576
Query: 107 PDNSIVVADSSNHRVQVFQS 126
+I++ D R+Q F+
Sbjct: 577 SQGNIIITDGLLQRIQFFKK 596
>gi|260785800|ref|XP_002587948.1| hypothetical protein BRAFLDRAFT_87336 [Branchiostoma floridae]
gi|229273103|gb|EEN43959.1| hypothetical protein BRAFLDRAFT_87336 [Branchiostoma floridae]
Length = 774
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 148/284 (52%), Gaps = 33/284 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTW 99
G GSEPG F +PRG+ V P N I VAD +N RVQV HF
Sbjct: 511 GGEGSEPGKFDYPRGVVVSPGNEIFVADKNNRRVQVHSTEGVYLRHFPTVVPGTGDKDME 570
Query: 100 PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 155
P + + ++++ V ++S+H VQ + +DGT + FG K G H +IAV T
Sbjct: 571 PHDVCMDGNDTLWVVGRGETSDHVVQ-YSTDGTAMAGFGL---KKGH--HFRFIAVDMRT 624
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
N ++V+D++ VQ VF+ DG+ V ++ + G+++ P Y+ V ++VS
Sbjct: 625 NHILVTDADKGEVQ-------VFRPDGSLVR---TVRHPRGEMKGPGYVTVDGKGNILVS 674
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
+ H V ++D +G+ + FG EGS EGQL++PRG+ D G+I V D GN R+QIFT
Sbjct: 675 EWGTHSVYVYDESGKFLFQFGGEGSGEGQLRYPRGICTDSLGHILVADYGNERVQIFTRH 734
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F+R EG+AV G ++V NH + VF
Sbjct: 735 GEFVRTVRTGPEP-------EGLAVGPEGQLVVTGWFNHTVTVF 771
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G GS G +PRGI I+VAD N RVQ+ H +
Sbjct: 684 YDESGKFLFQFGGEGSGEGQLRYPRGICTDSLGHILVADYGNERVQIFTRHGEFVRTV-- 741
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
P G+AVGP+ +VV NH V VF
Sbjct: 742 RTGPEPEGLAVGPEGQLVVTGWFNHTVTVF 771
>gi|291231823|ref|XP_002735871.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 774
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 156/307 (50%), Gaps = 21/307 (6%)
Query: 19 LLVSGIGQ-VGTTPRS-QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDN-SIVVADSS 75
L VS GQ V +P S + +++ + G RG G P G++V + IVVADS
Sbjct: 448 LFVSVFGQQVKGSPFSIEASHPKKVCLEFGVRGKGIGHVKEPWGVSVSSKSGDIVVADSG 507
Query: 76 NHRVQVCFPHFDLKTNCVFLAFTW---PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVG 132
N R+QV K + F F P +AV ++ +V++D +N ++ + G +
Sbjct: 508 NSRIQVFDKLGHFKRDFRFCGFDKKFDPLDVAVTDNDQVVISDYANKQIIISDISGRMIR 567
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
FGS +L+ P +AV++ + V D H + IFD DG + G G
Sbjct: 568 TFGS-----ERLKWPWGVAVNSYGDIHVVDYEEHCLTIFDC-------DGVHLNTIGCKG 615
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
+ GQ +P +A+++ + +I+SD N R+QIFD G + F + G EEGQ K+P GVA
Sbjct: 616 HAQGQFRNPICVAINSKDDIIISDRENSRIQIFDEEGNFLHLFQAPGEEEGQFKYPTGVA 675
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRE 312
VD I V D NNR+Q+F PDG F+R DG + +GV V + ++VCD
Sbjct: 676 VDSHDNIIVCDDWNNRVQMFRPDGVFIRRID--SDNDG-LRYPDGVTVTPDEKVVVCDYG 732
Query: 313 NHRIQVF 319
N ++VF
Sbjct: 733 NDCLKVF 739
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK------TNCVFLA---FTWPRGIAV 105
WP G+AV I V D H C FD C A F P +A+
Sbjct: 574 LKWPWGVAVNSYGDIHVVDYEEH----CLTIFDCDGVHLNTIGCKGHAQGQFRNPICVAI 629
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
+ I+++D N R+Q+F +G F+ F + G + GQ ++P +AV + + +IV D N
Sbjct: 630 NSKDDIIISDRENSRIQIFDEEGNFLHLFQAPGEEEGQFKYPTGVAVDSHDNIIVCDDWN 689
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
+RVQ+F + DG F+ + S + L +P + V+ +V+V D N +++F
Sbjct: 690 NRVQMF-------RPDGVFIRRIDSDNDG---LRYPDGVTVTPDEKVVVCDYGNDCLKVF 739
Query: 226 DVN 228
D N
Sbjct: 740 DCN 742
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 16/150 (10%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--------- 95
IG +G G F P +A+ + I+++D N R+Q+ FD + N + L
Sbjct: 611 IGCKGHAQGQFRNPICVAINSKDDIIISDRENSRIQI----FDEEGNFLHLFQAPGEEEG 666
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F +P G+AV ++I+V D N+RVQ+F+ DG F+ + S + L +P + V+
Sbjct: 667 QFKYPTGVAVDSHDNIIVCDDWNNRVQMFRPDGVFIRRIDSDNDG---LRYPDGVTVTPD 723
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFV 185
+V+V D N +++FD N + FV
Sbjct: 724 EKVVVCDYGNDCLKVFDCNSLMKPRSQVFV 753
>gi|423509851|ref|ZP_17486382.1| hypothetical protein IG3_01348 [Bacillus cereus HuA2-1]
gi|402456083|gb|EJV87861.1| hypothetical protein IG3_01348 [Bacillus cereus HuA2-1]
Length = 598
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 148/282 (52%), Gaps = 9/282 (3%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWPRG 102
G G P F PRGI + S+ VAD+ N+R+ + F + D L T F F +P
Sbjct: 208 GIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRI-MKFTNKDQFLYTVGNFFQFVYPNQ 266
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG---QLEHPHYIAVSNTNRVI 159
+ +I + D+ N+RV ++ G ++GN+ Q P+ + V
Sbjct: 267 VLPDGKGNIYITDTGNNRVLLYNEVGLTAVMKKTIGNERNGNTQYAGPYDVERDTNGNVF 326
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG--NKAGQLEHPHYIAVSNTNRVIVSDS 217
VSDS NHR+ +D++G++ G+ G G +G + GQ P IA N V VSDS
Sbjct: 327 VSDSFNHRILKYDISGKIVAKWGSLFGTGGPLGFGSLPGQFFVPRQIATDRYNNVYVSDS 386
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NHR+Q F +G + S+GS G G +FP G+A+D +G I + DS N+RIQ F P
Sbjct: 387 VNHRIQKFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKGNIFIADSENHRIQKFNPFFV 446
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+++ +G GSG+GEF +A+ S N+ V DR N+R+Q F
Sbjct: 447 YMKKWGRKGSGEGEFFQPMQLAIDSKDNVYVVDRINNRVQKF 488
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 143/281 (50%), Gaps = 18/281 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTW 99
IG+ G PG F P GIAV + +I+VAD++N+R+Q F + F++
Sbjct: 64 IGTLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSF 123
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PR IAV DN+ + D NHR+Q + DG ++ GS G G++ P IA++ + V
Sbjct: 124 PREIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVY 183
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSN 218
++D+ N+R+Q+FD G + GT + G Q HP I +T+ + V+D+
Sbjct: 184 IADTYNNRIQVFDKKGEFQRVIGTGIAGLGPY-----QFYHPRGINFDSTSGSLYVADTY 238
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ- 277
N+R+ F + + + G+ Q +P V D +G I + D+GNNR+ ++ G
Sbjct: 239 NNRIMKFTNKDQFLYTVGN----FFQFVYPNQVLPDGKGNIYITDTGNNRVLLYNEVGLT 294
Query: 278 --FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+ G +G+ ++ G V +NGN+ V D NHRI
Sbjct: 295 AVMKKTIGNERNGNTQYAGPYDVERDTNGNVFVSDSFNHRI 335
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 139/295 (47%), Gaps = 41/295 (13%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------------------A 96
+ P + + ++ V+DS NHR+ +D+ V
Sbjct: 311 YAGPYDVERDTNGNVFVSDSFNHRIL----KYDISGKIVAKWGSLFGTGGPLGFGSLPGQ 366
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F PR IA N++ V+DS NHR+Q F + G + +GS G G + P IA+ +
Sbjct: 367 FFVPRQIATDRYNNVYVSDSVNHRIQKFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKG 426
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ ++DS NHR+Q F+ F ++ K+G G+ G+ P +A+ + + V V D
Sbjct: 427 NIFIADSENHRIQKFN---PFF----VYMKKWGRKGSGEGEFFQPMQLAIDSKDNVYVVD 479
Query: 217 SNNHRVQIFDVNGRVITSFGS----------EGSEEG--QLKFPRGVAVDDQGYISVGDS 264
N+RVQ FD G +T +G+ E EG L P G+ +D + V D+
Sbjct: 480 RINNRVQKFDNEGNFLTKWGTNHGAGNLDPLENWREGPGDLFLPIGIEIDINNTVYVTDT 539
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NNR+ I+ +G FL +FG + G+F +G+ V S GNI++ D RIQ F
Sbjct: 540 SNNRVNIYNENGDFLESFGSFNGMSGQFFSPQGIDVDSQGNIIITDGLLQRIQFF 594
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A + V D N+R+ +G V G++G GQ P IAV ++
Sbjct: 30 PVAMARDAKGFLYVVDMGNNRILKIDKNGEVVDAIGTLGEGPGQFNMPFGIAVDKEGNIL 89
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ N+R+Q F+ FQ F+ +G+ G + Q P IAV + N ++D N
Sbjct: 90 VADTANYRIQKFN---EEFQ----FIKSWGTKGKGSEQFSFPREIAVDSDNNYYITDEYN 142
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HR+Q + +G+ I + GS G G++ P+G+A++ Q + + D+ NNRIQ+F G+F
Sbjct: 143 HRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVYIADTYNNRIQVFDKKGEFQ 202
Query: 280 RAFGCWGSGDGEFKGLEGVAV---MSNGNILVCDRENHRIQVF 319
R G +G G ++ + ++G++ V D N+RI F
Sbjct: 203 RVIGTGIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRIMKF 245
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+V +GS + + L P +A + V D N+R+ D NG V V G
Sbjct: 13 YVKSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRILKIDKNGEV-------VDAIG 65
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
++G GQ P IAV ++V+D+ N+R+Q F+ + I S+G++G Q FPR
Sbjct: 66 TLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSFPR 125
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+AVD + D N+RIQ ++PDGQ+++ G +G +GE +G+A+ + +
Sbjct: 126 EIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVYIA 185
Query: 310 DRENHRIQVF 319
D N+RIQVF
Sbjct: 186 DTYNNRIQVF 195
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 42/297 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-----------LAFTWPRGI 103
F +P + +I + D+ N+RV + + ++ V + P +
Sbjct: 261 FVYPNQVLPDGKGNIYITDTGNNRVLL---YNEVGLTAVMKKTIGNERNGNTQYAGPYDV 317
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM---------GNKAGQLEHPHYIAVSN 154
+ ++ V+DS NHR+ + G V K+GS+ G+ GQ P IA
Sbjct: 318 ERDTNGNVFVSDSFNHRILKYDISGKIVAKWGSLFGTGGPLGFGSLPGQFFVPRQIATDR 377
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
N V VSDS NHR+Q F + G + +GS G G + P IA+ + + +
Sbjct: 378 YNNVYVSDSVNHRIQ-------KFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKGNIFI 430
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+DS NHR+Q F+ + +G +GS EG+ P +A+D + + V D NNR+Q F
Sbjct: 431 ADSENHRIQKFNPFFVYMKKWGRKGSGEGEFFQPMQLAIDSKDNVYVVDRINNRVQKFDN 490
Query: 275 DGQFLRAFGC------------WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G FL +G W G G+ G+ + N + V D N+R+ ++
Sbjct: 491 EGNFLTKWGTNHGAGNLDPLENWREGPGDLFLPIGIEIDINNTVYVTDTSNNRVNIY 547
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+ + S+GSE L+ P +A D +G++ V D GNNRI +G+ + A G G G
Sbjct: 12 KYVKSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRILKIDKNGEVVDAIGTLGEGP 71
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F G+AV GNILV D N+RIQ F
Sbjct: 72 GQFNMPFGIAVDKEGNILVADTANYRIQKF 101
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 25/149 (16%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT----- 98
K G +GS G F P +A+ +++ V D N+RVQ FD + N + T
Sbjct: 450 KWGRKGSGEGEFFQPMQLAIDSKDNVYVVDRINNRVQ----KFDNEGNFLTKWGTNHGAG 505
Query: 99 -------W---------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
W P GI + +N++ V D+SN+RV ++ +G F+ FGS +G
Sbjct: 506 NLDPLENWREGPGDLFLPIGIEIDINNTVYVTDTSNNRVNIYNENGDFLESFGSFNGMSG 565
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
Q P I V + +I++D R+Q F
Sbjct: 566 QFFSPQGIDVDSQGNIIITDGLLQRIQFF 594
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 52 PGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL-----KTNCVFLAFTWPRGIAVG 106
PG P GI + +N++ V D+SN+RV + + D N + F P+GI V
Sbjct: 517 PGDLFLPIGIEIDINNTVYVTDTSNNRVNIYNENGDFLESFGSFNGMSGQFFSPQGIDVD 576
Query: 107 PDNSIVVADSSNHRVQVFQS 126
+I++ D R+Q F+
Sbjct: 577 SQGNIIITDGLLQRIQFFKK 596
>gi|340383637|ref|XP_003390323.1| PREDICTED: RING finger protein nhl-1-like [Amphimedon
queenslandica]
Length = 241
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 125/234 (53%), Gaps = 18/234 (7%)
Query: 95 LAFTWPRGIAVGP-DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
L P GIA+ P + +AD NHR+Q +G FVG+FG+ ++GQL P+ I +
Sbjct: 17 LQLNAPSGIAISPVTGQVYIADRDNHRIQKLSQNGRFVGQFGN--KRSGQLRFPYGITID 74
Query: 154 N--TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN- 210
T V VS+ N+R+ VF SDG FV FGS G+ Q P +A
Sbjct: 75 TGATGLVYVSEGGNNRIS-------VFTSDGVFVSSFGSKGSNIDQFNGPIGLAFDKDGF 127
Query: 211 ---RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ--GYISVGDSG 265
V V+D NHR+Q F +G+ + FG++GS GQL FP +A+D G + V D
Sbjct: 128 FQGLVYVTDFENHRIQKFSPDGKFVGKFGTKGSGPGQLSFPTCIAIDTAATGLVYVSDWA 187
Query: 266 NNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NN I IFT DG F+ FG GS +F G G+A +G + +CD +N+R+ V+
Sbjct: 188 NNHISIFTSDGVFVSKFGSAGSNIDQFNGPRGLAFDKDGFLYICDSDNNRVVVY 241
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 121/246 (49%), Gaps = 31/246 (12%)
Query: 45 IGSRGSEPGCFTWPRGIAVGP-DNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
+G GS P P GIA+ P + +AD NHR+Q L N F+
Sbjct: 9 VGEEGSGPLQLNAPSGIAISPVTGQVYIADRDNHRIQ------KLSQNGRFVGQFGNKRS 62
Query: 97 --FTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
+P GI + G + V++ N+R+ VF SDG FV FGS G+ Q P +A
Sbjct: 63 GQLRFPYGITIDTGATGLVYVSEGGNNRISVFTSDGVFVSSFGSKGSNIDQFNGPIGLAF 122
Query: 153 SN----TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-- 206
V V+D NHR+Q F DG FVGKFG+ G+ GQL P IA+
Sbjct: 123 DKDGFFQGLVYVTDFENHRIQ-------KFSPDGKFVGKFGTKGSGPGQLSFPTCIAIDT 175
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
+ T V VSD N+ + IF +G ++ FGS GS Q PRG+A D G++ + DS N
Sbjct: 176 AATGLVYVSDWANNHISIFTSDGVFVSKFGSAGSNIDQFNGPRGLAFDKDGFLYICDSDN 235
Query: 267 NRIQIF 272
NR+ ++
Sbjct: 236 NRVVVY 241
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 82/146 (56%), Gaps = 9/146 (6%)
Query: 181 DGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
DG + G G+ QL P IA+S T +V ++D +NHR+Q NGR + FG++
Sbjct: 2 DGYLIASVGEEGSGPLQLNAPSGIAISPVTGQVYIADRDNHRIQKLSQNGRFVGQFGNK- 60
Query: 240 SEEGQLKFPRGVAVDD--QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
GQL+FP G+ +D G + V + GNNRI +FT DG F+ +FG GS +F G G
Sbjct: 61 -RSGQLRFPYGITIDTGATGLVYVSEGGNNRISVFTSDGVFVSSFGSKGSNIDQFNGPIG 119
Query: 298 VAVMSN----GNILVCDRENHRIQVF 319
+A + G + V D ENHRIQ F
Sbjct: 120 LAFDKDGFFQGLVYVTDFENHRIQKF 145
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 19/94 (20%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNS--IVVADSSNHRVQVCFPHFDLKTNCVFLA----- 96
K G++GS PG ++P IA+ + + V+D +N+ + + ++ VF++
Sbjct: 154 KFGTKGSGPGQLSFPTCIAIDTAATGLVYVSDWANNHISI------FTSDGVFVSKFGSA 207
Query: 97 ------FTWPRGIAVGPDNSIVVADSSNHRVQVF 124
F PRG+A D + + DS N+RV V+
Sbjct: 208 GSNIDQFNGPRGLAFDKDGFLYICDSDNNRVVVY 241
>gi|229059629|ref|ZP_04197007.1| Cell surface protein [Bacillus cereus AH603]
gi|228719642|gb|EEL71241.1| Cell surface protein [Bacillus cereus AH603]
Length = 598
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 148/282 (52%), Gaps = 9/282 (3%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWPRG 102
G G P F PRGI + S+ VAD+ N+R+ + F + D L T F F +P
Sbjct: 208 GIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRI-MKFTNKDQFLYTVGNFFQFVYPNQ 266
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG---QLEHPHYIAVSNTNRVI 159
+ +I + D+ N+RV ++ G ++GN+ Q P+ + V
Sbjct: 267 VLPDGKGNIYITDTGNNRVLLYNEVGLTAVMKKTIGNERTGNTQYAGPYDVERDTNGNVF 326
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG--NKAGQLEHPHYIAVSNTNRVIVSDS 217
VSDS NHR+ +D++G++ G+ G G +G + GQ P IA N V VSDS
Sbjct: 327 VSDSFNHRILKYDISGKIVAKWGSLFGTGGPLGFGSLLGQFFVPRQIATDRYNNVYVSDS 386
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NHR+Q F +G + S+GS G G +FP G+A+D +G I + DS N+RIQ F P
Sbjct: 387 VNHRIQKFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKGNIFIADSENHRIQKFNPFFV 446
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+++ +G GSG+GEF +A+ S N+ V DR N+R+Q F
Sbjct: 447 YMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVDRINNRVQKF 488
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 143/281 (50%), Gaps = 18/281 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTW 99
IG+ G PG F P GIAV + +I+VAD++N+R+Q F + F++
Sbjct: 64 IGTLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSF 123
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PR IAV DN+ + D NHR+Q + DG ++ GS G G++ P IA++ + V
Sbjct: 124 PREIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVY 183
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSN 218
++D+ N+R+Q+FD G + GT + G Q HP I +T+ + V+D+
Sbjct: 184 IADTYNNRIQVFDKKGEFQRVIGTGIAGLGPY-----QFYHPRGINFDSTSGSLYVADTY 238
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ- 277
N+R+ F + + + G+ Q +P V D +G I + D+GNNR+ ++ G
Sbjct: 239 NNRIMKFTNKDQFLYTVGN----FFQFVYPNQVLPDGKGNIYITDTGNNRVLLYNEVGLT 294
Query: 278 --FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+ G +G+ ++ G V +NGN+ V D NHRI
Sbjct: 295 AVMKKTIGNERTGNTQYAGPYDVERDTNGNVFVSDSFNHRI 335
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 146/309 (47%), Gaps = 41/309 (13%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV------- 93
++ IG+ + + P + + ++ V+DS NHR+ +D+ V
Sbjct: 297 MKKTIGNERTGNTQYAGPYDVERDTNGNVFVSDSFNHRIL----KYDISGKIVAKWGSLF 352
Query: 94 -----------FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
F PR IA N++ V+DS NHR+Q F + G + +GS G G
Sbjct: 353 GTGGPLGFGSLLGQFFVPRQIATDRYNNVYVSDSVNHRIQKFTNSGIALASYGSFGVLPG 412
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
+ P IA+ + + ++DS NHR+Q F+ F ++ ++G G+ G+ P
Sbjct: 413 FFQFPSGIAIDSKGNIFIADSENHRIQKFN---PFF----VYMKEWGRKGSGEGEFFQPM 465
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS----------EGSEEG--QLKFPRG 250
+A+ + + V V D N+RVQ FD G +T +G+ E EG L P G
Sbjct: 466 QLAIDSKDNVYVVDRINNRVQKFDNEGNFLTKWGTNHGAGNLDPLENWREGPGDLFLPIG 525
Query: 251 VAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
+ +D + V D+ NNR+ I+ +G FL++FG + G+F +G+ V S GNI++ D
Sbjct: 526 IEIDINNTVYVTDTSNNRVNIYNENGDFLKSFGSFNGMSGQFFSPQGIDVDSQGNIIITD 585
Query: 311 RENHRIQVF 319
RIQ F
Sbjct: 586 GLLQRIQFF 594
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A + V D N+R+ +G V G++G GQ P IAV ++
Sbjct: 30 PVAMARDAKGFLYVVDMGNNRILKIDKNGEVVDAIGTLGEGPGQFNMPFGIAVDKEGNIL 89
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ N+R+Q F+ FQ F+ +G+ G + Q P IAV + N ++D N
Sbjct: 90 VADTANYRIQKFN---EEFQ----FIKSWGTKGKGSEQFSFPREIAVDSDNNYYITDEYN 142
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HR+Q + +G+ I + GS G G++ P+G+A++ Q + + D+ NNRIQ+F G+F
Sbjct: 143 HRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVYIADTYNNRIQVFDKKGEFQ 202
Query: 280 RAFGCWGSGDGEFKGLEGVAV---MSNGNILVCDRENHRIQVF 319
R G +G G ++ + ++G++ V D N+RI F
Sbjct: 203 RVIGTGIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRIMKF 245
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+V +GS + + L P +A + V D N+R+ D NG V V G
Sbjct: 13 YVKSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRILKIDKNGEV-------VDAIG 65
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
++G GQ P IAV ++V+D+ N+R+Q F+ + I S+G++G Q FPR
Sbjct: 66 TLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSFPR 125
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+AVD + D N+RIQ ++PDGQ+++ G +G +GE +G+A+ + +
Sbjct: 126 EIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVYIA 185
Query: 310 DRENHRIQVF 319
D N+RIQVF
Sbjct: 186 DTYNNRIQVF 195
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 131/294 (44%), Gaps = 36/294 (12%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRV----QVCFPHFDLKT----NCVFLAFTWPRGIAVG 106
F +P + +I + D+ N+RV +V KT + P +
Sbjct: 261 FVYPNQVLPDGKGNIYITDTGNNRVLLYNEVGLTAVMKKTIGNERTGNTQYAGPYDVERD 320
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSM---------GNKAGQLEHPHYIAVSNTNR 157
+ ++ V+DS NHR+ + G V K+GS+ G+ GQ P IA N
Sbjct: 321 TNGNVFVSDSFNHRILKYDISGKIVAKWGSLFGTGGPLGFGSLLGQFFVPRQIATDRYNN 380
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
V VSDS NHR+Q F + G + +GS G G + P IA+ + + ++DS
Sbjct: 381 VYVSDSVNHRIQ-------KFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKGNIFIADS 433
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NHR+Q F+ + +G +GS EG+ P +A+D + + V D NNR+Q F +G
Sbjct: 434 ENHRIQKFNPFFVYMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVDRINNRVQKFDNEGN 493
Query: 278 FLRAFGC------------WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL +G W G G+ G+ + N + V D N+R+ ++
Sbjct: 494 FLTKWGTNHGAGNLDPLENWREGPGDLFLPIGIEIDINNTVYVTDTSNNRVNIY 547
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+ + S+GSE L+ P +A D +G++ V D GNNRI +G+ + A G G G
Sbjct: 12 KYVKSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRILKIDKNGEVVDAIGTLGEGP 71
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F G+AV GNILV D N+RIQ F
Sbjct: 72 GQFNMPFGIAVDKEGNILVADTANYRIQKF 101
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 52 PGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD-LKT----NCVFLAFTWPRGIAVG 106
PG P GI + +N++ V D+SN+RV + + D LK+ N + F P+GI V
Sbjct: 517 PGDLFLPIGIEIDINNTVYVTDTSNNRVNIYNENGDFLKSFGSFNGMSGQFFSPQGIDVD 576
Query: 107 PDNSIVVADSSNHRVQVFQS 126
+I++ D R+Q F+
Sbjct: 577 SQGNIIITDGLLQRIQFFKK 596
>gi|340376129|ref|XP_003386586.1| PREDICTED: tripartite motif-containing protein 71-like [Amphimedon
queenslandica]
Length = 437
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 128/228 (56%), Gaps = 12/228 (5%)
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
+ F+ PRG+A+ PD I+V+D NHR+Q DG + G G+ Q +P IA+S
Sbjct: 219 VKFSSPRGVAITPDKFILVSD--NHRIQKISMDGHRITLAGEEGSGPLQFRYPAGIAISP 276
Query: 155 -TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
T ++ V+D N R+Q V D +F FGS G+ GQ + PH IA+ + V
Sbjct: 277 VTGQIYVADRYNDRIQ-------VLNPDLSFSYFFGSEGSANGQFKSPHGIAIDSQGLVY 329
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD--QGYISVGDSGNNRIQI 271
V+D+ +HR+Q+F +G + FG++G GQL P G+A+D G + V + GNNRI I
Sbjct: 330 VTDTYSHRIQMFFPDGNFVGEFGTKGFGPGQLNEPLGIAIDTAATGLVYVSERGNNRISI 389
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FT DG FLR FG G G +F +A+ +G + VCD N R+ V+
Sbjct: 390 FTSDGVFLRYFGRKGRGIDQFCNPCQLAISKDGFLYVCDYANCRLVVY 437
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 125/239 (52%), Gaps = 25/239 (10%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--------- 96
G GS F+ PRG+A+ PD I+V+D NHR+Q + + + LA
Sbjct: 212 GEGGSGDVKFSSPRGVAITPDKFILVSD--NHRIQ----KISMDGHRITLAGEEGSGPLQ 265
Query: 97 FTWPRGIAVGP-DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F +P GIA+ P I VAD N R+QV D +F FGS G+ GQ + PH IA+ +
Sbjct: 266 FRYPAGIAISPVTGQIYVADRYNDRIQVLNPDLSFSYFFGSEGSANGQFKSPHGIAIDSQ 325
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV--SNTNRVI 213
V V+D+ +HR+Q+ F DG FVG+FG+ G GQL P IA+ + T V
Sbjct: 326 GLVYVTDTYSHRIQM-------FFPDGNFVGEFGTKGFGPGQLNEPLGIAIDTAATGLVY 378
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
VS+ N+R+ IF +G + FG +G Q P +A+ G++ V D N R+ ++
Sbjct: 379 VSERGNNRISIFTSDGVFLRYFGRKGRGIDQFCNPCQLAISKDGFLYVCDYANCRLVVY 437
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 151/342 (44%), Gaps = 77/342 (22%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW----PR 101
GSRGS PG F PR IA+ + VAD +N+R+Q P + C+ + + P
Sbjct: 58 GSRGSLPGQFKAPRDIAINSQGLVYVADRNNYRIQKFSPQENRP--CIRYRYQFDTQAPN 115
Query: 102 GIAVGPD-----NSIVVADSSNHRVQVFQSDG--------------------TFVGKFGS 136
+ + D + + V++ NH V VF DG + V F
Sbjct: 116 SVGIAIDTVATGDLVHVSEWGNHSVSVFTGDGVFVNSFGLKVQVYDVHLEDTSLVVPFNP 175
Query: 137 MGNKAGQ-------LEHPHYIAVSNTNRVIVSD--------------------------- 162
N L P+ +A+ + N V++++
Sbjct: 176 YLNDITPVYFVNKLLRCPYGVAIIDDNHVMITEWDRGEGGSGDVKFSSPRGVAITPDKFI 235
Query: 163 --SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNN 219
S+NHR+Q + DG + G G+ Q +P IA+S T ++ V+D N
Sbjct: 236 LVSDNHRIQKISM-------DGHRITLAGEEGSGPLQFRYPAGIAISPVTGQIYVADRYN 288
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
R+Q+ + + FGSEGS GQ K P G+A+D QG + V D+ ++RIQ+F PDG F+
Sbjct: 289 DRIQVLNPDLSFSYFFGSEGSANGQFKSPHGIAIDSQGLVYVTDTYSHRIQMFFPDGNFV 348
Query: 280 RAFGCWGSGDGEFKGLEGVAV--MSNGNILVCDRENHRIQVF 319
FG G G G+ G+A+ + G + V +R N+RI +F
Sbjct: 349 GEFGTKGFGPGQLNEPLGIAIDTAATGLVYVSERGNNRISIF 390
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 118/280 (42%), Gaps = 57/280 (20%)
Query: 95 LAFTWPRGIAVGPDNSIV-VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
L F P GIA+ P V VAD N+R+QV SD TF FGS G+ GQ + P IA++
Sbjct: 17 LQFNSPSGIAISPITGYVYVADYYNNRIQVLNSDLTFYDSFGSRGSLPGQFKAPRDIAIN 76
Query: 154 NTNRVIVSDSNNHRVQIFDVNGR------------------------------------- 176
+ V V+D NN+R+Q F
Sbjct: 77 SQGLVYVADRNNYRIQKFSPQENRPCIRYRYQFDTQAPNSVGIAIDTVATGDLVHVSEWG 136
Query: 177 -----VFQSDGTFVGKFG-SMGNKAGQLE--------HPHYIAVSNTNRVIVSDSNNHRV 222
VF DG FV FG + LE +P+ ++ V + V
Sbjct: 137 NHSVSVFTGDGVFVNSFGLKVQVYDVHLEDTSLVVPFNPYLNDITPVYFVNKLLRCPYGV 196
Query: 223 QIFDVNGRVITSF--GSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
I D N +IT + G GS + + PRGVA+ +I V D N+RIQ + DG +
Sbjct: 197 AIIDDNHVMITEWDRGEGGSGDVKFSSPRGVAITPDKFILVSD--NHRIQKISMDGHRIT 254
Query: 281 AFGCWGSGDGEFKGLEGVAVMS-NGNILVCDRENHRIQVF 319
G GSG +F+ G+A+ G I V DR N RIQV
Sbjct: 255 LAGEEGSGPLQFRYPAGIAISPVTGQIYVADRYNDRIQVL 294
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
++G +I SFG EGS Q P G+A+ GY+ V D NNRIQ+ D F +FG
Sbjct: 1 MDGYLIASFGEEGSGSLQFNSPSGIAISPITGYVYVADYYNNRIQVLNSDLTFYDSFGSR 60
Query: 286 GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GS G+FK +A+ S G + V DR N+RIQ F
Sbjct: 61 GSLPGQFKAPRDIAINSQGLVYVADRNNYRIQKF 94
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 80/167 (47%), Gaps = 22/167 (13%)
Query: 127 DGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFV 185
DG + FG G+ + Q P IA+S T V V+D N+R+Q V SD TF
Sbjct: 2 DGYLIASFGEEGSGSLQFNSPSGIAISPITGYVYVADYYNNRIQ-------VLNSDLTFY 54
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG-----RVITSFGSEGS 240
FGS G+ GQ + P IA+++ V V+D NN+R+Q F R F ++
Sbjct: 55 DSFGSRGSLPGQFKAPRDIAINSQGLVYVADRNNYRIQKFSPQENRPCIRYRYQFDTQAP 114
Query: 241 EEGQLKFPRGVAVDDQG---YISVGDSGNNRIQIFTPDGQFLRAFGC 284
G+A+D + V + GN+ + +FT DG F+ +FG
Sbjct: 115 NS------VGIAIDTVATGDLVHVSEWGNHSVSVFTGDGVFVNSFGL 155
>gi|229011263|ref|ZP_04168456.1| Cell surface protein [Bacillus mycoides DSM 2048]
gi|423487084|ref|ZP_17463766.1| hypothetical protein IEU_01707 [Bacillus cereus BtB2-4]
gi|423492808|ref|ZP_17469452.1| hypothetical protein IEW_01706 [Bacillus cereus CER057]
gi|423500400|ref|ZP_17477017.1| hypothetical protein IEY_03627 [Bacillus cereus CER074]
gi|228750146|gb|EEL99978.1| Cell surface protein [Bacillus mycoides DSM 2048]
gi|401155404|gb|EJQ62815.1| hypothetical protein IEY_03627 [Bacillus cereus CER074]
gi|401156292|gb|EJQ63699.1| hypothetical protein IEW_01706 [Bacillus cereus CER057]
gi|402438961|gb|EJV70970.1| hypothetical protein IEU_01707 [Bacillus cereus BtB2-4]
Length = 598
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 148/282 (52%), Gaps = 9/282 (3%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWPRG 102
G G P F PRGI + S+ VAD+ N+R+ + F + D L T F F +P
Sbjct: 208 GIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRI-MKFTNKDQFLYTVGNFFQFVYPNQ 266
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG---QLEHPHYIAVSNTNRVI 159
+ +I + D+ N+RV ++ G ++GN+ Q P+ + V
Sbjct: 267 VFPDGKGNIYITDTGNNRVLLYNEVGLTAVMKKTIGNERNGNTQYAGPYDVERDTNGNVF 326
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG--NKAGQLEHPHYIAVSNTNRVIVSDS 217
VSDS NHR+ +D++G++ G+ G G +G + GQ P IA N V VSDS
Sbjct: 327 VSDSFNHRILKYDISGKIVAKWGSLFGTGGPLGFGSLPGQFFVPRQIATDRYNNVYVSDS 386
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NHR+Q F +G + S+GS G G +FP G+A+D +G I + DS N+RIQ F P
Sbjct: 387 VNHRIQKFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKGNIFIADSENHRIQKFNPFFV 446
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+++ +G GSG+GEF +A+ S N+ V DR N+R+Q F
Sbjct: 447 YMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVDRINNRVQKF 488
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 143/281 (50%), Gaps = 18/281 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTW 99
IG+ G PG F P GIAV + +I+VAD++N+R+Q F + F++
Sbjct: 64 IGTLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSF 123
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PR IAV DN+ + D NHR+Q + DG ++ GS G G++ P IA++ + V
Sbjct: 124 PREIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVY 183
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSN 218
++D+ N+R+Q+FD G + GT + G Q HP I +T+ + V+D+
Sbjct: 184 IADTYNNRIQVFDKKGEFQRVIGTGIAGLGPY-----QFYHPRGINFDSTSGSLYVADTY 238
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ- 277
N+R+ F + + + G+ Q +P V D +G I + D+GNNR+ ++ G
Sbjct: 239 NNRIMKFTNKDQFLYTVGN----FFQFVYPNQVFPDGKGNIYITDTGNNRVLLYNEVGLT 294
Query: 278 --FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+ G +G+ ++ G V +NGN+ V D NHRI
Sbjct: 295 AVMKKTIGNERNGNTQYAGPYDVERDTNGNVFVSDSFNHRI 335
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 140/297 (47%), Gaps = 45/297 (15%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------------------A 96
+ P + + ++ V+DS NHR+ +D+ V
Sbjct: 311 YAGPYDVERDTNGNVFVSDSFNHRIL----KYDISGKIVAKWGSLFGTGGPLGFGSLPGQ 366
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F PR IA N++ V+DS NHR+Q F + G + +GS G G + P IA+ +
Sbjct: 367 FFVPRQIATDRYNNVYVSDSVNHRIQKFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKG 426
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ ++DS NHR+Q F+ F ++ ++G G+ G+ P +A+ + + V V D
Sbjct: 427 NIFIADSENHRIQKFN---PFF----VYMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVD 479
Query: 217 SNNHRVQIFDVNGRVITSFGS--------------EGSEEGQLKFPRGVAVDDQGYISVG 262
N+RVQ FD G +T +G+ EGS G L P G+ +D + V
Sbjct: 480 RINNRVQKFDNEGNFLTKWGTNHGAGNLDPLENWREGS--GDLFLPIGIEIDINNTVYVT 537
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D+ NNR+ I+ +G FL +FG + G+F +G+ V S GNI++ D RIQ F
Sbjct: 538 DTSNNRVNIYNENGNFLESFGSFNGMSGQFFSPQGIDVDSQGNIIITDGLLQRIQFF 594
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A + V D N+R+ +G V G++G GQ P IAV ++
Sbjct: 30 PVAMARDAKGFLYVVDMGNNRILKIDKNGEVVDAIGTLGEGPGQFNMPFGIAVDKEGNIL 89
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ N+R+Q F+ FQ F+ +G+ G + Q P IAV + N ++D N
Sbjct: 90 VADTANYRIQKFN---EEFQ----FIKSWGTKGKGSEQFSFPREIAVDSDNNYYITDEYN 142
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HR+Q + +G+ I + GS G G++ P+G+A++ Q + + D+ NNRIQ+F G+F
Sbjct: 143 HRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVYIADTYNNRIQVFDKKGEFQ 202
Query: 280 RAFGCWGSGDGEFKGLEGVAV---MSNGNILVCDRENHRIQVF 319
R G +G G ++ + ++G++ V D N+RI F
Sbjct: 203 RVIGTGIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRIMKF 245
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+V +GS + + L P +A + V D N+R+ D NG V V G
Sbjct: 13 YVKSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRILKIDKNGEV-------VDAIG 65
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
++G GQ P IAV ++V+D+ N+R+Q F+ + I S+G++G Q FPR
Sbjct: 66 TLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSFPR 125
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+AVD + D N+RIQ ++PDGQ+++ G +G +GE +G+A+ + +
Sbjct: 126 EIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVYIA 185
Query: 310 DRENHRIQVF 319
D N+RIQVF
Sbjct: 186 DTYNNRIQVF 195
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 42/297 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-----------LAFTWPRGI 103
F +P + +I + D+ N+RV + + ++ V + P +
Sbjct: 261 FVYPNQVFPDGKGNIYITDTGNNRVLL---YNEVGLTAVMKKTIGNERNGNTQYAGPYDV 317
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM---------GNKAGQLEHPHYIAVSN 154
+ ++ V+DS NHR+ + G V K+GS+ G+ GQ P IA
Sbjct: 318 ERDTNGNVFVSDSFNHRILKYDISGKIVAKWGSLFGTGGPLGFGSLPGQFFVPRQIATDR 377
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
N V VSDS NHR+Q F + G + +GS G G + P IA+ + + +
Sbjct: 378 YNNVYVSDSVNHRIQ-------KFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKGNIFI 430
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+DS NHR+Q F+ + +G +GS EG+ P +A+D + + V D NNR+Q F
Sbjct: 431 ADSENHRIQKFNPFFVYMKEWGRKGSGEGEFFQPMQLAIDSKDNVYVVDRINNRVQKFDN 490
Query: 275 DGQFLRAFGC------------WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G FL +G W G G+ G+ + N + V D N+R+ ++
Sbjct: 491 EGNFLTKWGTNHGAGNLDPLENWREGSGDLFLPIGIEIDINNTVYVTDTSNNRVNIY 547
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+ + S+GSE L+ P +A D +G++ V D GNNRI +G+ + A G G G
Sbjct: 12 KYVKSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRILKIDKNGEVVDAIGTLGEGP 71
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F G+AV GNILV D N+RIQ F
Sbjct: 72 GQFNMPFGIAVDKEGNILVADTANYRIQKF 101
>gi|156370888|ref|XP_001628499.1| predicted protein [Nematostella vectensis]
gi|156215477|gb|EDO36436.1| predicted protein [Nematostella vectensis]
Length = 688
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 145/285 (50%), Gaps = 25/285 (8%)
Query: 47 SRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------AF 97
S G G F P G+AV IVV+DS H +QV P N +F F
Sbjct: 416 SHGMTKGKFLQPHGVAVSTIGQIVVSDSLKHHLQVFTP----DGNLMFDFGGEGSDDGKF 471
Query: 98 TWPRGIAVGP-DNSIVVADSSNHRVQVFQ-SDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P IA + + VADS N+R+QV +G F+ KFG +G GQ P ++V
Sbjct: 472 MHPMAIAFDKSEKCLYVADSDNNRIQVVDVKNGRFIRKFGCVGEGPGQFNGPCGVSVDGK 531
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV-IV 214
RVIV+D NN+RVQ VF S+G F+ K G G + ++ P + IV
Sbjct: 532 GRVIVTDWNNNRVQ-------VFSSEGKFLMKLGDTGEE--RIIQPRCALYHDDKEAFIV 582
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
SD+ N+ +++FD NG+ G GS+ G+L PRG+A+D I V D N+R+Q F
Sbjct: 583 SDTGNNVIKVFDKNGKFSHVIGKPGSKRGELHGPRGLAIDKYQNIIVCDFENHRLQFFKF 642
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
DG L +FG G G G+F ++V+ ++V D N+RIQ+F
Sbjct: 643 DGTVLSSFGTNGKGIGQFAFPLSISVVGGERVIVSDWGNNRIQIF 687
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 115/247 (46%), Gaps = 55/247 (22%)
Query: 121 VQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQS 180
V+V Q T V F S G G+ PH +AVS +++VSDS H +Q VF
Sbjct: 401 VEVKQPVLTPVKSFSSHGMTKGKFLQPHGVAVSTIGQIVVSDSLKHHLQ-------VFTP 453
Query: 181 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI-VSDSNNHRVQIFDV-NGRVITSFGSE 238
DG + FG G+ G+ HP IA + + + V+DS+N+R+Q+ DV NGR I FG
Sbjct: 454 DGNLMFDFGGEGSDDGKFMHPMAIAFDKSEKCLYVADSDNNRIQVVDVKNGRFIRKFGCV 513
Query: 239 GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG-----------CW-- 285
G GQ P GV+VD +G + V D NNR+Q+F+ +G+FL G C
Sbjct: 514 GEGPGQFNGPCGVSVDGKGRVIVTDWNNNRVQVFSSEGKFLMKLGDTGEERIIQPRCALY 573
Query: 286 ---------------------------------GSGDGEFKGLEGVAVMSNGNILVCDRE 312
GS GE G G+A+ NI+VCD E
Sbjct: 574 HDDKEAFIVSDTGNNVIKVFDKNGKFSHVIGKPGSKRGELHGPRGLAIDKYQNIIVCDFE 633
Query: 313 NHRIQVF 319
NHR+Q F
Sbjct: 634 NHRLQFF 640
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 87/148 (58%), Gaps = 2/148 (1%)
Query: 174 NGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT 233
N V Q T V F S G G+ PH +AVS +++VSDS H +Q+F +G ++
Sbjct: 400 NVEVKQPVLTPVKSFSSHGMTKGKFLQPHGVAVSTIGQIVVSDSLKHHLQVFTPDGNLMF 459
Query: 234 SFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIF-TPDGQFLRAFGCWGSGDGE 291
FG EGS++G+ P +A D + + V DS NNRIQ+ +G+F+R FGC G G G+
Sbjct: 460 DFGGEGSDDGKFMHPMAIAFDKSEKCLYVADSDNNRIQVVDVKNGRFIRKFGCVGEGPGQ 519
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G GV+V G ++V D N+R+QVF
Sbjct: 520 FNGPCGVSVDGKGRVIVTDWNNNRVQVF 547
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 93/196 (47%), Gaps = 23/196 (11%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--- 96
R K G G PG F P G++V ++V D +N+RVQV + FL
Sbjct: 505 RFIRKFGCVGEGPGQFNGPCGVSVDGKGRVIVTDWNNNRVQV------FSSEGKFLMKLG 558
Query: 97 ------FTWPRGIAVGPDN-SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
PR D + +V+D+ N+ ++VF +G F G G+K G+L P
Sbjct: 559 DTGEERIIQPRCALYHDDKEAFIVSDTGNNVIKVFDKNGKFSHVIGKPGSKRGELHGPRG 618
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
+A+ +IV D NHR+Q F+ DGT + FG+ G GQ P I+V
Sbjct: 619 LAIDKYQNIIVCDFENHRLQF-------FKFDGTVLSSFGTNGKGIGQFAFPLSISVVGG 671
Query: 210 NRVIVSDSNNHRVQIF 225
RVIVSD N+R+QIF
Sbjct: 672 ERVIVSDWGNNRIQIF 687
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------F 97
IG GS+ G PRG+A+ +I+V D NHR+Q F FD F F
Sbjct: 603 IGKPGSKRGELHGPRGLAIDKYQNIIVCDFENHRLQ--FFKFDGTVLSSFGTNGKGIGQF 660
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+P I+V ++V+D N+R+Q+F+
Sbjct: 661 AFPLSISVVGGERVIVSDWGNNRIQIFK 688
>gi|170739674|ref|YP_001768329.1| NHL repeat-containing protein [Methylobacterium sp. 4-46]
gi|168193948|gb|ACA15895.1| NHL repeat containing protein [Methylobacterium sp. 4-46]
Length = 319
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 143/287 (49%), Gaps = 25/287 (8%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------- 96
IG+RG+E G F + +A+ D I+ D+++ VQ FD KT FL
Sbjct: 38 IGTRGTEAGQFEYVEDLALTRDGRILATDAAHAWVQA----FD-KTTGRFLGRFGGRGDE 92
Query: 97 ---FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
P GIAV ++ VAD ++ ++ + ++ FG G AGQ ++ +
Sbjct: 93 DHHLERPEGIAVDEAGNVFVADHASGFIKKYDPAFRWLVTFGGYGAGAGQTMRSEFMDI- 151
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+ R+ V ++ HRV +FD+ DG V FG G G+ + P VS R+
Sbjct: 152 HGGRLFVPEAGTHRVSVFDL-------DGAHVRAFGRRGAGPGEFDSPEAAKVSPDGRLF 204
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
V+D N R+Q+FD GR++ +G G+ G+ + P G+ D G + V + GN+R+Q+
Sbjct: 205 VTDLRNDRLQVFDPEGRLLAVWGRTGTGPGEFRSPAGLGFDRDGNVYVSEIGNSRVQVLG 264
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAV-MSNGNILVCDRENHRIQVF 319
PDG+FL +G GS G F L GV V G + V D N RIQVF
Sbjct: 265 PDGRFLGMWGVPGSAPGAFSNLHGVLVDRDTGLVYVADTGNFRIQVF 311
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 101/190 (53%), Gaps = 9/190 (4%)
Query: 131 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGS 190
+ G+ G +AGQ E+ +A++ R++ +D+ + VQ FD ++ G F+G+FG
Sbjct: 35 IASIGTRGTEAGQFEYVEDLALTRDGRILATDAAHAWVQAFD------KTTGRFLGRFGG 88
Query: 191 MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRG 250
G++ LE P IAV V V+D + ++ +D R + +FG G+ GQ R
Sbjct: 89 RGDEDHHLERPEGIAVDEAGNVFVADHASGFIKKYDPAFRWLVTFGGYGAGAGQTM--RS 146
Query: 251 VAVDDQ-GYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+D G + V ++G +R+ +F DG +RAFG G+G GEF E V +G + V
Sbjct: 147 EFMDIHGGRLFVPEAGTHRVSVFDLDGAHVRAFGRRGAGPGEFDSPEAAKVSPDGRLFVT 206
Query: 310 DRENHRIQVF 319
D N R+QVF
Sbjct: 207 DLRNDRLQVF 216
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 107/240 (44%), Gaps = 16/240 (6%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
R + G RG E P GIAV ++ VAD ++ ++ P F + F +
Sbjct: 81 RFLGRFGGRGDEDHHLERPEGIAVDEAGNVFVADHASGFIKKYDPAF--RWLVTFGGYGA 138
Query: 100 PRGIAVGPD------NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
G + + + V ++ HRV VF DG V FG G G+ + P VS
Sbjct: 139 GAGQTMRSEFMDIHGGRLFVPEAGTHRVSVFDLDGAHVRAFGRRGAGPGEFDSPEAAKVS 198
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
R+ V+D N R+Q+FD GR+ + +G G G+ P + V
Sbjct: 199 PDGRLFVTDLRNDRLQVFDPEGRL-------LAVWGRTGTGPGEFRSPAGLGFDRDGNVY 251
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD-DQGYISVGDSGNNRIQIF 272
VS+ N RVQ+ +GR + +G GS G GV VD D G + V D+GN RIQ+F
Sbjct: 252 VSEIGNSRVQVLGPDGRFLGMWGVPGSAPGAFSNLHGVLVDRDTGLVYVADTGNFRIQVF 311
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 18/102 (17%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---- 95
RL G G+ PG F P G+ D ++ V++ N RVQV P + FL
Sbjct: 221 RLLAVWGRTGTGPGEFRSPAGLGFDRDGNVYVSEIGNSRVQVLGP------DGRFLGMWG 274
Query: 96 -------AFTWPRGIAVGPDNSIV-VADSSNHRVQVFQSDGT 129
AF+ G+ V D +V VAD+ N R+QVF+ G
Sbjct: 275 VPGSAPGAFSNLHGVLVDRDTGLVYVADTGNFRIQVFRRVGA 316
>gi|229029660|ref|ZP_04185736.1| Cell surface protein [Bacillus cereus AH1271]
gi|228731664|gb|EEL82570.1| Cell surface protein [Bacillus cereus AH1271]
Length = 617
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 146/282 (51%), Gaps = 9/282 (3%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWPRG 102
G G P F PRGI + S+ VAD+ N+R+ + F + D L T F F +P
Sbjct: 227 GIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRI-MKFTNKDQFLYTVGNFFQFVYPNQ 285
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG---QLEHPHYIAVSNTNRVI 159
+ +I + D+ N+RV ++ G ++GN Q P+ + V
Sbjct: 286 VLPDGKGNIYITDTGNNRVLLYNEVGLTAVMKKTIGNDRNGNTQYAGPYDVERDKNGNVF 345
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG--NKAGQLEHPHYIAVSNTNRVIVSDS 217
VSDS NHR+ +D +G+V G+ G G +G + GQ P IA N V VSDS
Sbjct: 346 VSDSFNHRILKYDTSGKVVGKWGSLFGAGGPLGYGSLPGQFYVPRQIATDRYNNVYVSDS 405
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NHR+Q F +G + S+GS G G +FP G+A+D +G I + DS N+RIQ F+P
Sbjct: 406 VNHRIQKFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKGNIFIADSENHRIQKFSPFFV 465
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+++ +G GSG+ EF +AV S NI V DR N+R+Q F
Sbjct: 466 YMKEWGRKGSGEAEFFQPMQLAVDSKDNIYVVDRINNRVQKF 507
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 148/321 (46%), Gaps = 27/321 (8%)
Query: 8 KNINSCFLLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDN 67
K I CF + + + VG +Y++ GS P +A
Sbjct: 5 KKIICCFFIVIVSLWMFASVGNASAVKYVKSW------GSELDPSKLLRTPVAMARDAKG 58
Query: 68 SIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQ 122
+ V D N+RV + ++ L F P GIAV + +I+VAD++N+R+Q
Sbjct: 59 FLYVVDMGNNRVLKIDKNGEVVDAIGTLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQ 118
Query: 123 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDG 182
F + F+ +G+ G +GQ P IAV + N ++D NHR+Q + NG+ Q+
Sbjct: 119 KFNEEFQFIKSWGTKGKGSGQFSFPREIAVDSDNNYYITDEYNHRIQKYSPNGQYIQT-- 176
Query: 183 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG---RVITSFGSEG 239
GS G G++ P IA++ + V ++D+ N+R+Q+FD G RVI + G G
Sbjct: 177 -----IGSYGKANGEMALPQGIAINKQDEVYIADTYNNRIQVFDKKGEFKRVIGA-GIAG 230
Query: 240 SEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGV 298
Q PRG+ D G + V D+ NNRI FT QFL G + +F V
Sbjct: 231 LGPYQFYHPRGINFDSTSGSLYVADTYNNRIMKFTNKDQFLYTVGNF----FQFVYPNQV 286
Query: 299 AVMSNGNILVCDRENHRIQVF 319
GNI + D N+R+ ++
Sbjct: 287 LPDGKGNIYITDTGNNRVLLY 307
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 138/295 (46%), Gaps = 41/295 (13%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL------KTNCVFLA------------ 96
+ P + + ++ V+DS NHR+ +D K +F A
Sbjct: 330 YAGPYDVERDKNGNVFVSDSFNHRIL----KYDTSGKVVGKWGSLFGAGGPLGYGSLPGQ 385
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F PR IA N++ V+DS NHR+Q F + G + +GS G G + P IA+ +
Sbjct: 386 FYVPRQIATDRYNNVYVSDSVNHRIQKFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKG 445
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ ++DS NHR+Q F ++ ++G G+ + P +AV + + + V D
Sbjct: 446 NIFIADSENHRIQ-------KFSPFFVYMKEWGRKGSGEAEFFQPMQLAVDSKDNIYVVD 498
Query: 217 SNNHRVQIFDVNGRVITSFGS----------EGSEEG--QLKFPRGVAVDDQGYISVGDS 264
N+RVQ FD G +T +G+ E EG L P G+ +D + V D+
Sbjct: 499 RINNRVQKFDNEGNFLTKWGTNHGTGNLDPLENWREGPGDLFLPIGIEIDINNTVYVTDT 558
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NNR+ I+ +G FL +FG + G+F +G+ V S GNI++ D RIQ F
Sbjct: 559 SNNRVNIYNENGDFLESFGSFSGISGQFFSPQGIDVDSQGNIIITDGLLQRIQFF 613
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 132/297 (44%), Gaps = 42/297 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-----------LAFTWPRGI 103
F +P + +I + D+ N+RV + + ++ V + P +
Sbjct: 280 FVYPNQVLPDGKGNIYITDTGNNRVLL---YNEVGLTAVMKKTIGNDRNGNTQYAGPYDV 336
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM---------GNKAGQLEHPHYIAVSN 154
+ ++ V+DS NHR+ + + G VGK+GS+ G+ GQ P IA
Sbjct: 337 ERDKNGNVFVSDSFNHRILKYDTSGKVVGKWGSLFGAGGPLGYGSLPGQFYVPRQIATDR 396
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
N V VSDS NHR+Q F + G + +GS G G + P IA+ + + +
Sbjct: 397 YNNVYVSDSVNHRIQ-------KFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKGNIFI 449
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+DS NHR+Q F + +G +GS E + P +AVD + I V D NNR+Q F
Sbjct: 450 ADSENHRIQKFSPFFVYMKEWGRKGSGEAEFFQPMQLAVDSKDNIYVVDRINNRVQKFDN 509
Query: 275 DGQFLRAFGC------------WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G FL +G W G G+ G+ + N + V D N+R+ ++
Sbjct: 510 EGNFLTKWGTNHGTGNLDPLENWREGPGDLFLPIGIEIDINNTVYVTDTSNNRVNIY 566
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 52 PGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD-LKTNCVFLA----FTWPRGIAVG 106
PG P GI + +N++ V D+SN+RV + + D L++ F F P+GI V
Sbjct: 536 PGDLFLPIGIEIDINNTVYVTDTSNNRVNIYNENGDFLESFGSFSGISGQFFSPQGIDVD 595
Query: 107 PDNSIVVADSSNHRVQVFQS 126
+I++ D R+Q F+
Sbjct: 596 SQGNIIITDGLLQRIQFFKK 615
>gi|390365340|ref|XP_796849.3| PREDICTED: tripartite motif-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 753
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 128/258 (49%), Gaps = 38/258 (14%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P+GI I+V DS+N +Q F S G +FG G GQL+ P IAVS+
Sbjct: 495 FTNPQGITSTASGRILVTDSNNQCIQGFNSSGEVKQRFGVRGRSNGQLQRPTGIAVSHNG 554
Query: 157 RVIVSDSNNHRVQIFDVNGR-----------------------------------VFQSD 181
IV+D N + F G+ +F
Sbjct: 555 NYIVADYENKWISNFSPEGKFINKIGTGKLVAPKGVAVDNNNNIIVVDNRASTIFIFSPS 614
Query: 182 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSE 241
G + K GS G + QL PH++AV+ N +IVSD +NH ++IFD++G++ITSFGS G
Sbjct: 615 GKVLNKIGSRGAQDQQLCGPHFVAVNKDNHIIVSDFHNHCIKIFDIDGQLITSFGSRGEG 674
Query: 242 EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVM 301
GQ P GVAVD+ G I V D GN+R+Q+F +G F+ G G + + +
Sbjct: 675 NGQFNAPTGVAVDNLGNIIVADWGNSRLQVFDCNGSFVSYINTMGD---PLYGPQDICIT 731
Query: 302 SNGNILVCDRENHRIQVF 319
S+G++ V D NH ++V+
Sbjct: 732 SDGHVAVADSGNHCVKVY 749
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 118/229 (51%), Gaps = 10/229 (4%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGI 103
+ G RG G P GIAV + + +VAD N + P P+G+
Sbjct: 531 RFGVRGRSNGQLQRPTGIAVSHNGNYIVADYENKWISNFSPEGKFINKIGTGKLVAPKGV 590
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 163
AV +N+I+V D+ + +F G + K GS G + QL PH++AV+ N +IVSD
Sbjct: 591 AVDNNNNIIVVDNRASTIFIFSPSGKVLNKIGSRGAQDQQLCGPHFVAVNKDNHIIVSDF 650
Query: 164 NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
+NH ++IFD+ DG + FGS G GQ P +AV N +IV+D N R+Q
Sbjct: 651 HNHCIKIFDI-------DGQLITSFGSRGEGNGQFNAPTGVAVDNLGNIIVADWGNSRLQ 703
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+FD NG ++ + G L P+ + + G+++V DSGN+ ++++
Sbjct: 704 VFDCNGSFVSYINTMGDP---LYGPQDICITSDGHVAVADSGNHCVKVY 749
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%)
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+I + G+ G +G+ P+G+ G I V DS N IQ F G+ + FG G +G
Sbjct: 481 LILTIGTHGRNKGEFTNPQGITSTASGRILVTDSNNQCIQGFNSSGEVKQRFGVRGRSNG 540
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ + G+AV NGN +V D EN I F
Sbjct: 541 QLQRPTGIAVSHNGNYIVADYENKWISNF 569
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWPRGI 103
GSRG G F P G+AV +I+VAD N R+QV C F N + P+ I
Sbjct: 669 GSRGEGNGQFNAPTGVAVDNLGNIIVADWGNSRLQVFDCNGSFVSYINTMGDPLYGPQDI 728
Query: 104 AVGPDNSIVVADSSNHRVQVFQ 125
+ D + VADS NH V+V++
Sbjct: 729 CITSDGHVAVADSGNHCVKVYK 750
>gi|147918860|ref|YP_687414.1| hypothetical protein RRC373 [Methanocella arvoryzae MRE50]
gi|110622810|emb|CAJ38088.1| hypothetical protein RRC373 [Methanocella arvoryzae MRE50]
Length = 539
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 129/256 (50%), Gaps = 12/256 (4%)
Query: 69 IVVADSSNHRVQVCFPHFDLKT-----NCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQV 123
I VAD+ N R+QV D T F P GIAV +I VAD+ N R+QV
Sbjct: 7 IYVADTINQRIQVWDKASDTWTPMGSPGTETGQFKEPYGIAVDDTGNIYVADTFNQRIQV 66
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGT 183
+ GS G++ GQ + IAV +T + V+D+ NHR+Q+++ + +
Sbjct: 67 WNKATNTWTTMGSHGDEPGQFDQTSGIAVDDTGNIYVTDTFNHRIQVWNKATNTWTT--- 123
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
GS G++ GQ + IAV +T + V+D+ NHR+Q+++ T GS G E G
Sbjct: 124 ----MGSHGDEPGQFDQTSGIAVDDTGNIYVTDTINHRIQVWNKATNTWTPIGSLGDEPG 179
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
Q K P G+AVD G I V D N+RIQ++ G +G G+F G+AV
Sbjct: 180 QFKEPYGIAVDGTGNIYVTDRVNHRIQVWNKATNTWTIMGSYGIDPGQFGMPHGIAVDDA 239
Query: 304 GNILVCDRENHRIQVF 319
GNI V D RIQV+
Sbjct: 240 GNIYVADTRIDRIQVW 255
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 127/237 (53%), Gaps = 20/237 (8%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------- 96
+GS G+E G F P GIAV +I VAD+ N R+QV ++ TN
Sbjct: 30 MGSPGTETGQFKEPYGIAVDDTGNIYVADTFNQRIQV----WNKATNTWTTMGSHGDEPG 85
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F GIAV +I V D+ NHR+QV+ GS G++ GQ + IAV +T
Sbjct: 86 QFDQTSGIAVDDTGNIYVTDTFNHRIQVWNKATNTWTTMGSHGDEPGQFDQTSGIAVDDT 145
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+ V+D+ NHR+Q+++ ++ T+ GS+G++ GQ + P+ IAV T + V+
Sbjct: 146 GNIYVTDTINHRIQVWN------KATNTWT-PIGSLGDEPGQFKEPYGIAVDGTGNIYVT 198
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
D NHR+Q+++ T GS G + GQ P G+AVDD G I V D+ +RIQ++
Sbjct: 199 DRVNHRIQVWNKATNTWTIMGSYGIDPGQFGMPHGIAVDDAGNIYVADTRIDRIQVW 255
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 89/168 (52%), Gaps = 7/168 (4%)
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
+ +T + V+D+ N R+Q++D + GS G + GQ + P+ IAV +T
Sbjct: 1 MDSTGNIYVADTINQRIQVWDKASDTWT-------PMGSPGTETGQFKEPYGIAVDDTGN 53
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
+ V+D+ N R+Q+++ T+ GS G E GQ G+AVDD G I V D+ N+RIQ+
Sbjct: 54 IYVADTFNQRIQVWNKATNTWTTMGSHGDEPGQFDQTSGIAVDDTGNIYVTDTFNHRIQV 113
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ G G G+F G+AV GNI V D NHRIQV+
Sbjct: 114 WNKATNTWTTMGSHGDEPGQFDQTSGIAVDDTGNIYVTDTINHRIQVW 161
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 98/193 (50%), Gaps = 20/193 (10%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
+GS G EPG F GIAV +I V D+ NHR+QV ++ TN
Sbjct: 76 TMGSHGDEPGQFDQTSGIAVDDTGNIYVTDTFNHRIQV----WNKATNTWTTMGSHGDEP 131
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F GIAV +I V D+ NHR+QV+ GS+G++ GQ + P+ IAV
Sbjct: 132 GQFDQTSGIAVDDTGNIYVTDTINHRIQVWNKATNTWTPIGSLGDEPGQFKEPYGIAVDG 191
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
T + V+D NHR+Q+++ ++ T+ GS G GQ PH IAV + + V
Sbjct: 192 TGNIYVTDRVNHRIQVWN------KATNTWT-IMGSYGIDPGQFGMPHGIAVDDAGNIYV 244
Query: 215 SDSNNHRVQIFDV 227
+D+ R+Q+++V
Sbjct: 245 ADTRIDRIQVWNV 257
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FT 98
+GS G EPG F GIAV +I V D+ NHR+QV + T L F
Sbjct: 123 TMGSHGDEPGQFDQTSGIAVDDTGNIYVTDTINHRIQVWNKATNTWTPIGSLGDEPGQFK 182
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P GIAV +I V D NHR+QV+ GS G GQ PH IAV + +
Sbjct: 183 EPYGIAVDGTGNIYVTDRVNHRIQVWNKATNTWTIMGSYGIDPGQFGMPHGIAVDDAGNI 242
Query: 159 IVSDSNNHRVQIFDVNGRVFQSD 181
V+D+ R+Q+++V V SD
Sbjct: 243 YVADTRIDRIQVWNVVDAVAGSD 265
>gi|432093140|gb|ELK25398.1| Tripartite motif-containing protein 3 [Myotis davidii]
Length = 772
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 148/316 (46%), Gaps = 56/316 (17%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG---------------SMGNKAG 196
V +IV D N +F FQ +G VG+FG S+G
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAENPIPSLGLSTI 635
Query: 197 QLE-------------HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
LE PH++AV+N N ++V+D +NH V+++ +G + FGS G G
Sbjct: 636 ILEITPLSQHPSFIITGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNG 695
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
Q P GVAVD G I V D GN+RIQ+F G FL G +G+A+ S+
Sbjct: 696 QFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTAAE---PLYGPQGLALTSD 752
Query: 304 GNILVCDRENHRIQVF 319
G+++V D NH + +
Sbjct: 753 GHVVVADAGNHCFKAY 768
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 38/261 (14%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG---------------SMGNKAGQL 144
P+G+AV + I+V D+ + V FQ +G VG+FG S+G L
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAENPIPSLGLSTIIL 637
Query: 145 E-------------HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM 191
E PH++AV+N N ++V+D +NH V +V+ +DG F+ KFGS
Sbjct: 638 EITPLSQHPSFIITGPHFVAVNNKNEIVVTDFHNHSV-------KVYSADGEFLFKFGSH 690
Query: 192 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGV 251
G GQ P +AV + +IV+D N R+Q+FD +G ++ + L P+G+
Sbjct: 691 GEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTAAEP---LYGPQGL 747
Query: 252 AVDDQGYISVGDSGNNRIQIF 272
A+ G++ V D+GN+ + +
Sbjct: 748 ALTSDGHVVVADAGNHCFKAY 768
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD ++ FL++
Sbjct: 685 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSFLSYINTAA 738
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVAD+ NH + ++
Sbjct: 739 EPLYGPQGLALTSDGHVVVADAGNHCFKAYR 769
>gi|291234819|ref|XP_002737346.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 741
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 152/306 (49%), Gaps = 16/306 (5%)
Query: 18 TLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNH 77
T+LV+ G+ + + + L G +GS G F P + + D +++V DS N+
Sbjct: 446 TVLVNNKSVQGSPVKINAIPTKGLMGNYGGKGSGLGQFNSPWDVLIASDGNVLVCDSKNN 505
Query: 78 RVQVCFPHFDLKTNCVFLAFT---WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKF 134
R+Q+ K F F PR +A D + + DS+N +V V S+ + F
Sbjct: 506 RLQLLTLDGKHKQIIQFTGFNEPFCPRCVAESQDCNYFITDSNNKQVVVCNSNFELIRCF 565
Query: 135 GSMGNKAGQLEHPHYIAVSNTN-RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
G+ GQL +P I ++ N RV V D+N+H + R++ DG ++ FGS
Sbjct: 566 GN-----GQLTYPAGICINPVNGRVYVVDNNSHYI-------RIYNQDGGYIQSFGSQSG 613
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
Q +PH I + VIV+D+ NHR+Q+ G + FGS G+ +GQL++PRGVA
Sbjct: 614 GDCQFIYPHGITSDSQGNVIVADNWNHRIQVLTGEGEFLFKFGSRGNSDGQLQYPRGVAT 673
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
D +GY+ V D NNR+Q + GQF+ G +G+ G ++V D N
Sbjct: 674 DTEGYVYVSDYNNNRVQKYDSHGQFVCRIDSPTDGLSSPRGICVTNDKPFGKVVVADTGN 733
Query: 314 HRIQVF 319
+ I+VF
Sbjct: 734 NCIKVF 739
>gi|329764725|ref|ZP_08256320.1| NHL repeat-containing protein [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329138775|gb|EGG43016.1| NHL repeat-containing protein [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 500
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/277 (35%), Positives = 137/277 (49%), Gaps = 20/277 (7%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV------FLAFTWPRGIAVGPD 108
F +P +AV I V D N+R+Q+ F + + + F +P G+AV
Sbjct: 46 FAFPVDVAVDSAGDIYVGDQQNNRIQI-FDSAGVYKSTIGNGLTPEYQFDFPAGVAVDSA 104
Query: 109 NSIVVADSSNHRVQVFQSDGTF---VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
I VAD N R+Q+F S G + +G G G+ E P IAV + + V D +N
Sbjct: 105 GDIYVADVFNSRIQIFDSAGVYKSTIGVTGEPGSDDDHFEDPDGIAVDSAGDIYVVDPSN 164
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
+R+QIFD S G + G+ Q + P +AV + + V+D N+R+QIF
Sbjct: 165 NRIQIFD-------SAGVYKSTIGNGLTPEYQFDFPEGVAVDSAGDIYVADQGNNRIQIF 217
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
D G ++ G+ + E QL P G+AVD G I V D GNNRIQIF G + G
Sbjct: 218 DSAGVYKSTIGNGLTPEYQLSGPVGIAVDSAGDIYVADQGNNRIQIFDSAGVYKSTIGVT 277
Query: 286 ---GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GS D F +G+AV S G I V D NHRIQ+F
Sbjct: 278 GEPGSDDDHFNFPDGIAVDSLGKIYVADIFNHRIQIF 314
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 93/186 (50%), Gaps = 11/186 (5%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV------FLAFTW 99
G GS+ F P GIAV I V D SN+R+Q+ F + + + F +
Sbjct: 134 GEPGSDDDHFEDPDGIAVDSAGDIYVVDPSNNRIQI-FDSAGVYKSTIGNGLTPEYQFDF 192
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+AV I VAD N+R+Q+F S G + G+ QL P IAV + +
Sbjct: 193 PEGVAVDSAGDIYVADQGNNRIQIFDSAGVYKSTIGNGLTPEYQLSGPVGIAVDSAGDIY 252
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D N+R+QIFD G V++S +G G G+ P IAV + ++ V+D N
Sbjct: 253 VADQGNNRIQIFDSAG-VYKS---TIGVTGEPGSDDDHFNFPDGIAVDSLGKIYVADIFN 308
Query: 220 HRVQIF 225
HR+QIF
Sbjct: 309 HRIQIF 314
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 42/76 (55%)
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
+ FP VAVD G I VGD NNRIQIF G + G + + +F GVAV S
Sbjct: 45 EFAFPVDVAVDSAGDIYVGDQQNNRIQIFDSAGVYKSTIGNGLTPEYQFDFPAGVAVDSA 104
Query: 304 GNILVCDRENHRIQVF 319
G+I V D N RIQ+F
Sbjct: 105 GDIYVADVFNSRIQIF 120
>gi|345485585|ref|XP_003425301.1| PREDICTED: tripartite motif-containing protein 71-like isoform 2
[Nasonia vitripennis]
Length = 763
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 125/223 (56%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ + +IVVAD SN+R+Q+F+ DG+ + +FG G + + P +AV R+I
Sbjct: 501 PWGVTCDKEGNIVVADRSNNRIQIFRQDGSLIRRFGKHGKGPVEFDRPAGVAVDGRRRII 560
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+Q+ + +G ++ FG G++ GQ +P +AV++ ++ VSD+ N
Sbjct: 561 VADKDNHRIQVLTI-------EGQYLLSFGERGSRCGQFNYPWDVAVNSECQIAVSDTRN 613
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKF--PRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
HRVQ+F G + +G E + F PRGVA D QG + V D N+R+ + PD
Sbjct: 614 HRVQLFSAEGIFLRKYGFEATPNVWKHFDSPRGVAFDPQGNLIVTDFNNHRVVMVEPDYL 673
Query: 278 FLRAFGCWG-SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+R +G +F +G+ V GN ++ D +HRIQ+F
Sbjct: 674 NVRVVVPESYNGVKQFLRPQGLIVDDEGNYIISDSRHHRIQIF 716
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 145/276 (52%), Gaps = 21/276 (7%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL-----KTNCVFLAFTWPRGIAVGPD 108
C W G+ + +IVVAD SN+R+Q+ L K + F P G+AV
Sbjct: 499 CRPW--GVTCDKEGNIVVADRSNNRIQIFRQDGSLIRRFGKHGKGPVEFDRPAGVAVDGR 556
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
I+VAD NHR+QV +G ++ FG G++ GQ +P +AV++ ++ VSD+ NHRV
Sbjct: 557 RRIIVADKDNHRIQVLTIEGQYLLSFGERGSRCGQFNYPWDVAVNSECQIAVSDTRNHRV 616
Query: 169 QIFDVNGRVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
Q+ F ++G F+ K+G + N + P +A +IV+D NNHRV + +
Sbjct: 617 QL-------FSAEGIFLRKYGFEATPNVWKHFDSPRGVAFDPQGNLIVTDFNNHRVVMVE 669
Query: 227 ---VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
+N RV+ G + Q P+G+ VDD+G + DS ++RIQIF G +G
Sbjct: 670 PDYLNVRVVVPESYNGVK--QFLRPQGLIVDDEGNYIISDSRHHRIQIFNSAGVLKWKYG 727
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G+G E G+A+ +G I+V D N+R+ +
Sbjct: 728 KYGTGLDELDRPSGIALTPDGRIVVVDFGNNRVMLI 763
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 116/245 (47%), Gaps = 31/245 (12%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------- 95
+ G G P F P G+AV I+VAD NHR+QV L +L
Sbjct: 534 RFGKHGKGPVEFDRPAGVAVDGRRRIIVADKDNHRIQV------LTIEGQYLLSFGERGS 587
Query: 96 ---AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG--SMGNKAGQLEHPHYI 150
F +P +AV + I V+D+ NHRVQ+F ++G F+ K+G + N + P +
Sbjct: 588 RCGQFNYPWDVAVNSECQIAVSDTRNHRVQLFSAEGIFLRKYGFEATPNVWKHFDSPRGV 647
Query: 151 AVSNTNRVIVSDSNNHRVQIFD---VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
A +IV+D NNHRV + + +N RV + N Q P + V
Sbjct: 648 AFDPQGNLIVTDFNNHRVVMVEPDYLNVRVVVPESY---------NGVKQFLRPQGLIVD 698
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+ I+SDS +HR+QIF+ G + +G G+ +L P G+A+ G I V D GNN
Sbjct: 699 DEGNYIISDSRHHRIQIFNSAGVLKWKYGKYGTGLDELDRPSGIALTPDGRIVVVDFGNN 758
Query: 268 RIQIF 272
R+ +
Sbjct: 759 RVMLI 763
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 30 TPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH---- 85
T QYL G RGS G F +P +AV + I V+D+ NHRVQ+
Sbjct: 573 TIEGQYL------LSFGERGSRCGQFNYPWDVAVNSECQIAVSDTRNHRVQLFSAEGIFL 626
Query: 86 ----FDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG-NK 140
F+ N V+ F PRG+A P +++V D +NHRV + + D V N
Sbjct: 627 RKYGFEATPN-VWKHFDSPRGVAFDPQGNLIVTDFNNHRVVMVEPDYLNVRVVVPESYNG 685
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
Q P + V + I+SDS +HR+QIF+ S G K+G G +L+
Sbjct: 686 VKQFLRPQGLIVDDEGNYIISDSRHHRIQIFN-------SAGVLKWKYGKYGTGLDELDR 738
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIF 225
P IA++ R++V D N+RV +
Sbjct: 739 PSGIALTPDGRIVVVDFGNNRVMLI 763
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 44/79 (55%)
Query: 241 EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
E L P GV D +G I V D NNRIQIF DG +R FG G G EF GVAV
Sbjct: 494 ETDNLCRPWGVTCDKEGNIVVADRSNNRIQIFRQDGSLIRRFGKHGKGPVEFDRPAGVAV 553
Query: 301 MSNGNILVCDRENHRIQVF 319
I+V D++NHRIQV
Sbjct: 554 DGRRRIIVADKDNHRIQVL 572
>gi|229017270|ref|ZP_04174175.1| Cell surface protein [Bacillus cereus AH1273]
gi|229023443|ref|ZP_04179943.1| Cell surface protein [Bacillus cereus AH1272]
gi|423420069|ref|ZP_17397158.1| hypothetical protein IE3_03541 [Bacillus cereus BAG3X2-1]
gi|228737853|gb|EEL88349.1| Cell surface protein [Bacillus cereus AH1272]
gi|228744023|gb|EEL94120.1| Cell surface protein [Bacillus cereus AH1273]
gi|401101978|gb|EJQ09965.1| hypothetical protein IE3_03541 [Bacillus cereus BAG3X2-1]
Length = 598
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 147/282 (52%), Gaps = 9/282 (3%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWPRG 102
G G P F PRGI + S+ VAD+ N+R+ + F + D L T F F +P
Sbjct: 208 GIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRI-MKFTNKDQFLYTVGNFFQFVYPNQ 266
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG---QLEHPHYIAVSNTNRVI 159
+ +I + D+ N+RV ++ G ++GN+ Q P+ + V
Sbjct: 267 VFPDGKGNIYITDTGNNRVLLYNEVGLTAVMKKTIGNERNGNTQYAGPYDVERDTNGNVF 326
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG--NKAGQLEHPHYIAVSNTNRVIVSDS 217
VSDS NHR+ +D++G++ G+ G G +G + GQ P IA N V VSDS
Sbjct: 327 VSDSFNHRILKYDISGKIVAKWGSLFGTGGPLGFGSLPGQFFVPRQIATDRYNNVYVSDS 386
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NHR+Q F +G + S+GS G G +FP G+A+D +G I + DS N+RIQ F P
Sbjct: 387 VNHRIQKFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKGNIFIADSENHRIQKFNPFFV 446
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+++ +G GS +GEF +A+ S N+ V DR N+R+Q F
Sbjct: 447 YMKEWGRKGSREGEFFQPMQLAIDSKDNVYVVDRINNRVQKF 488
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 143/281 (50%), Gaps = 18/281 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTW 99
IG+ G PG F P GIAV + +I+VAD++N+R+Q F + F++
Sbjct: 64 IGTLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSF 123
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PR IAV DN+ + D NHR+Q + DG ++ GS G G++ P IA++ + V
Sbjct: 124 PREIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVY 183
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSN 218
++D+ N+R+Q+FD G + GT + G Q HP I +T+ + V+D+
Sbjct: 184 IADTYNNRIQVFDKKGEFQRVIGTGIAGLGPY-----QFYHPRGINFDSTSGSLYVADTY 238
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ- 277
N+R+ F + + + G+ Q +P V D +G I + D+GNNR+ ++ G
Sbjct: 239 NNRIMKFTNKDQFLYTVGN----FFQFVYPNQVFPDGKGNIYITDTGNNRVLLYNEVGLT 294
Query: 278 --FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+ G +G+ ++ G V +NGN+ V D NHRI
Sbjct: 295 AVMKKTIGNERNGNTQYAGPYDVERDTNGNVFVSDSFNHRI 335
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------------------A 96
+ P + + ++ V+DS NHR+ +D+ V
Sbjct: 311 YAGPYDVERDTNGNVFVSDSFNHRIL----KYDISGKIVAKWGSLFGTGGPLGFGSLPGQ 366
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F PR IA N++ V+DS NHR+Q F + G + +GS G G + P IA+ +
Sbjct: 367 FFVPRQIATDRYNNVYVSDSVNHRIQKFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKG 426
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ ++DS NHR+Q F+ F ++ ++G G++ G+ P +A+ + + V V D
Sbjct: 427 NIFIADSENHRIQKFN---PFF----VYMKEWGRKGSREGEFFQPMQLAIDSKDNVYVVD 479
Query: 217 SNNHRVQIFDVNGRVITSFGS----------EGSEEG--QLKFPRGVAVDDQGYISVGDS 264
N+RVQ FD G +T +G+ E EG L P G+ +D + V D+
Sbjct: 480 RINNRVQKFDNEGNFLTKWGTNHGAGNLDPLENWREGPGDLFLPIGIEIDINNTVYVTDT 539
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NNR+ I+ +G FL +FG + G+F +G+ V S GNI++ D RIQ F
Sbjct: 540 SNNRVNIYNENGDFLESFGSFNGMSGQFFSPQGIDVDSQGNIIITDGLLQRIQFF 594
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A + V D N+R+ +G V G++G GQ P IAV ++
Sbjct: 30 PVAMARDAKGFLYVVDMGNNRILKIDKNGEVVDAIGTLGEGPGQFNMPFGIAVDKEGNIL 89
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ N+R+Q F+ FQ F+ +G+ G + Q P IAV + N ++D N
Sbjct: 90 VADTANYRIQKFN---EEFQ----FIKSWGTKGKGSEQFSFPREIAVDSDNNYYITDEYN 142
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HR+Q + +G+ I + GS G G++ P+G+A++ Q + + D+ NNRIQ+F G+F
Sbjct: 143 HRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVYIADTYNNRIQVFDKKGEFQ 202
Query: 280 RAFGCWGSGDGEFKGLEGVAV---MSNGNILVCDRENHRIQVF 319
R G +G G ++ + ++G++ V D N+RI F
Sbjct: 203 RVIGTGIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRIMKF 245
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+V +GS + + L P +A + V D N+R+ D NG V V G
Sbjct: 13 YVKSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRILKIDKNGEV-------VDAIG 65
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
++G GQ P IAV ++V+D+ N+R+Q F+ + I S+G++G Q FPR
Sbjct: 66 TLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSFPR 125
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+AVD + D N+RIQ ++PDGQ+++ G +G +GE +G+A+ + +
Sbjct: 126 EIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGSYGKANGEMALPQGIAINKQDEVYIA 185
Query: 310 DRENHRIQVF 319
D N+RIQVF
Sbjct: 186 DTYNNRIQVF 195
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 42/297 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-----------LAFTWPRGI 103
F +P + +I + D+ N+RV + + ++ V + P +
Sbjct: 261 FVYPNQVFPDGKGNIYITDTGNNRVLL---YNEVGLTAVMKKTIGNERNGNTQYAGPYDV 317
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM---------GNKAGQLEHPHYIAVSN 154
+ ++ V+DS NHR+ + G V K+GS+ G+ GQ P IA
Sbjct: 318 ERDTNGNVFVSDSFNHRILKYDISGKIVAKWGSLFGTGGPLGFGSLPGQFFVPRQIATDR 377
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
N V VSDS NHR+Q F + G + +GS G G + P IA+ + + +
Sbjct: 378 YNNVYVSDSVNHRIQ-------KFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKGNIFI 430
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+DS NHR+Q F+ + +G +GS EG+ P +A+D + + V D NNR+Q F
Sbjct: 431 ADSENHRIQKFNPFFVYMKEWGRKGSREGEFFQPMQLAIDSKDNVYVVDRINNRVQKFDN 490
Query: 275 DGQFLRAFGC------------WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G FL +G W G G+ G+ + N + V D N+R+ ++
Sbjct: 491 EGNFLTKWGTNHGAGNLDPLENWREGPGDLFLPIGIEIDINNTVYVTDTSNNRVNIY 547
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+ + S+GSE L+ P +A D +G++ V D GNNRI +G+ + A G G G
Sbjct: 12 KYVKSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRILKIDKNGEVVDAIGTLGEGP 71
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F G+AV GNILV D N+RIQ F
Sbjct: 72 GQFNMPFGIAVDKEGNILVADTANYRIQKF 101
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 52 PGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL-----KTNCVFLAFTWPRGIAVG 106
PG P GI + +N++ V D+SN+RV + + D N + F P+GI V
Sbjct: 517 PGDLFLPIGIEIDINNTVYVTDTSNNRVNIYNENGDFLESFGSFNGMSGQFFSPQGIDVD 576
Query: 107 PDNSIVVADSSNHRVQVFQS 126
+I++ D R+Q F+
Sbjct: 577 SQGNIIITDGLLQRIQFFKK 596
>gi|423667638|ref|ZP_17642667.1| hypothetical protein IKO_01335 [Bacillus cereus VDM034]
gi|423676298|ref|ZP_17651237.1| hypothetical protein IKS_03841 [Bacillus cereus VDM062]
gi|401303303|gb|EJS08865.1| hypothetical protein IKO_01335 [Bacillus cereus VDM034]
gi|401307419|gb|EJS12844.1| hypothetical protein IKS_03841 [Bacillus cereus VDM062]
Length = 598
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 147/282 (52%), Gaps = 9/282 (3%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWPRG 102
G G P F PRGI + S+ VAD+ N+R+ + F + D L T F F +P
Sbjct: 208 GIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRI-MKFTNKDQFLYTVGNFFQFVYPNQ 266
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG---QLEHPHYIAVSNTNRVI 159
+ +I + D+ N+RV ++ G ++GN+ Q P+ + V
Sbjct: 267 VFPDGKGNIYITDTGNNRVLLYNEVGLTAVMKKTIGNERNGNTQYAGPYDVERDTNGNVF 326
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG--NKAGQLEHPHYIAVSNTNRVIVSDS 217
VSDS NHR+ +D++G++ G+ G G +G + GQ P IA N V VSDS
Sbjct: 327 VSDSFNHRILKYDISGKIVAKWGSLFGTGGPLGFGSLPGQFFVPRQIATDRYNNVYVSDS 386
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NHR+Q F +G + S+GS G G +FP G+A+D +G I + DS N+RIQ F P
Sbjct: 387 VNHRIQKFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKGNIFIADSENHRIQKFNPFFV 446
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+++ +G GS +GEF +A+ S N+ V DR N+R+Q F
Sbjct: 447 YMKEWGRKGSREGEFFQPMQLAIDSKDNVYVVDRINNRVQKF 488
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 143/281 (50%), Gaps = 18/281 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTW 99
IG+ G PG F P GIAV + +I+VAD++N+R+Q F + F++
Sbjct: 64 IGTLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSF 123
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PR IAV DN+ + D NHR+Q + DG ++ GS G G++ P IA++ + V
Sbjct: 124 PREIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGSYGKANGEVALPQGIAINKQDEVY 183
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSN 218
++D+ N+R+Q+FD G + GT + G Q HP I +T+ + V+D+
Sbjct: 184 IADTYNNRIQVFDKKGEFQRVIGTGIAGLGPY-----QFYHPRGINFDSTSGSLYVADTY 238
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ- 277
N+R+ F + + + G+ Q +P V D +G I + D+GNNR+ ++ G
Sbjct: 239 NNRIMKFTNKDQFLYTVGN----FFQFVYPNQVFPDGKGNIYITDTGNNRVLLYNEVGLT 294
Query: 278 --FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+ G +G+ ++ G V +NGN+ V D NHRI
Sbjct: 295 AVMKKTIGNERNGNTQYAGPYDVERDTNGNVFVSDSFNHRI 335
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------------------A 96
+ P + + ++ V+DS NHR+ +D+ V
Sbjct: 311 YAGPYDVERDTNGNVFVSDSFNHRIL----KYDISGKIVAKWGSLFGTGGPLGFGSLPGQ 366
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F PR IA N++ V+DS NHR+Q F + G + +GS G G + P IA+ +
Sbjct: 367 FFVPRQIATDRYNNVYVSDSVNHRIQKFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKG 426
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ ++DS NHR+Q F+ F ++ ++G G++ G+ P +A+ + + V V D
Sbjct: 427 NIFIADSENHRIQKFN---PFF----VYMKEWGRKGSREGEFFQPMQLAIDSKDNVYVVD 479
Query: 217 SNNHRVQIFDVNGRVITSFGS----------EGSEEG--QLKFPRGVAVDDQGYISVGDS 264
N+RVQ FD G +T +G+ E EG L P G+ +D + V D+
Sbjct: 480 RINNRVQKFDNEGNFLTKWGTNHGAGNLDPLENWREGPGDLFLPIGIEIDINNTVYVTDT 539
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NNR+ I+ +G FL +FG + G+F +G+ V S GNI++ D RIQ F
Sbjct: 540 SNNRVNIYNENGNFLESFGSFNGMSGQFFSPQGIDVDSQGNIIITDGLLQRIQFF 594
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A + V D N+R+ +G V G++G GQ P IAV ++
Sbjct: 30 PVAMARDAKGFLYVVDMGNNRILKIDKNGEVVDAIGTLGEGPGQFNMPFGIAVDKEGNIL 89
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ N+R+Q F+ FQ F+ +G+ G + Q P IAV + N ++D N
Sbjct: 90 VADTANYRIQKFN---EEFQ----FIKSWGTKGKGSEQFSFPREIAVDSDNNYYITDEYN 142
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HR+Q + +G+ I + GS G G++ P+G+A++ Q + + D+ NNRIQ+F G+F
Sbjct: 143 HRIQKYSPDGQYIQTIGSYGKANGEVALPQGIAINKQDEVYIADTYNNRIQVFDKKGEFQ 202
Query: 280 RAFGCWGSGDGEFKGLEGVAV---MSNGNILVCDRENHRIQVF 319
R G +G G ++ + ++G++ V D N+RI F
Sbjct: 203 RVIGTGIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRIMKF 245
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+V +GS + + L P +A + V D N+R+ D NG V V G
Sbjct: 13 YVKSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRILKIDKNGEV-------VDAIG 65
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
++G GQ P IAV ++V+D+ N+R+Q F+ + I S+G++G Q FPR
Sbjct: 66 TLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSFPR 125
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+AVD + D N+RIQ ++PDGQ+++ G +G +GE +G+A+ + +
Sbjct: 126 EIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGSYGKANGEVALPQGIAINKQDEVYIA 185
Query: 310 DRENHRIQVF 319
D N+RIQVF
Sbjct: 186 DTYNNRIQVF 195
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 42/297 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-----------LAFTWPRGI 103
F +P + +I + D+ N+RV + + ++ V + P +
Sbjct: 261 FVYPNQVFPDGKGNIYITDTGNNRVLL---YNEVGLTAVMKKTIGNERNGNTQYAGPYDV 317
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM---------GNKAGQLEHPHYIAVSN 154
+ ++ V+DS NHR+ + G V K+GS+ G+ GQ P IA
Sbjct: 318 ERDTNGNVFVSDSFNHRILKYDISGKIVAKWGSLFGTGGPLGFGSLPGQFFVPRQIATDR 377
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
N V VSDS NHR+Q F + G + +GS G G + P IA+ + + +
Sbjct: 378 YNNVYVSDSVNHRIQ-------KFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKGNIFI 430
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+DS NHR+Q F+ + +G +GS EG+ P +A+D + + V D NNR+Q F
Sbjct: 431 ADSENHRIQKFNPFFVYMKEWGRKGSREGEFFQPMQLAIDSKDNVYVVDRINNRVQKFDN 490
Query: 275 DGQFLRAFGC------------WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G FL +G W G G+ G+ + N + V D N+R+ ++
Sbjct: 491 EGNFLTKWGTNHGAGNLDPLENWREGPGDLFLPIGIEIDINNTVYVTDTSNNRVNIY 547
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+ + S+GSE L+ P +A D +G++ V D GNNRI +G+ + A G G G
Sbjct: 12 KYVKSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRILKIDKNGEVVDAIGTLGEGP 71
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F G+AV GNILV D N+RIQ F
Sbjct: 72 GQFNMPFGIAVDKEGNILVADTANYRIQKF 101
>gi|345485587|ref|XP_001606986.2| PREDICTED: tripartite motif-containing protein 71-like isoform 1
[Nasonia vitripennis]
Length = 755
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 125/223 (56%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ + +IVVAD SN+R+Q+F+ DG+ + +FG G + + P +AV R+I
Sbjct: 493 PWGVTCDKEGNIVVADRSNNRIQIFRQDGSLIRRFGKHGKGPVEFDRPAGVAVDGRRRII 552
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+Q+ + +G ++ FG G++ GQ +P +AV++ ++ VSD+ N
Sbjct: 553 VADKDNHRIQVLTI-------EGQYLLSFGERGSRCGQFNYPWDVAVNSECQIAVSDTRN 605
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKF--PRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
HRVQ+F G + +G E + F PRGVA D QG + V D N+R+ + PD
Sbjct: 606 HRVQLFSAEGIFLRKYGFEATPNVWKHFDSPRGVAFDPQGNLIVTDFNNHRVVMVEPDYL 665
Query: 278 FLRAFGCWG-SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+R +G +F +G+ V GN ++ D +HRIQ+F
Sbjct: 666 NVRVVVPESYNGVKQFLRPQGLIVDDEGNYIISDSRHHRIQIF 708
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 145/276 (52%), Gaps = 21/276 (7%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL-----KTNCVFLAFTWPRGIAVGPD 108
C W G+ + +IVVAD SN+R+Q+ L K + F P G+AV
Sbjct: 491 CRPW--GVTCDKEGNIVVADRSNNRIQIFRQDGSLIRRFGKHGKGPVEFDRPAGVAVDGR 548
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
I+VAD NHR+QV +G ++ FG G++ GQ +P +AV++ ++ VSD+ NHRV
Sbjct: 549 RRIIVADKDNHRIQVLTIEGQYLLSFGERGSRCGQFNYPWDVAVNSECQIAVSDTRNHRV 608
Query: 169 QIFDVNGRVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
Q+ F ++G F+ K+G + N + P +A +IV+D NNHRV + +
Sbjct: 609 QL-------FSAEGIFLRKYGFEATPNVWKHFDSPRGVAFDPQGNLIVTDFNNHRVVMVE 661
Query: 227 ---VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
+N RV+ G + Q P+G+ VDD+G + DS ++RIQIF G +G
Sbjct: 662 PDYLNVRVVVPESYNGVK--QFLRPQGLIVDDEGNYIISDSRHHRIQIFNSAGVLKWKYG 719
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G+G E G+A+ +G I+V D N+R+ +
Sbjct: 720 KYGTGLDELDRPSGIALTPDGRIVVVDFGNNRVMLI 755
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 116/245 (47%), Gaps = 31/245 (12%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------- 95
+ G G P F P G+AV I+VAD NHR+QV L +L
Sbjct: 526 RFGKHGKGPVEFDRPAGVAVDGRRRIIVADKDNHRIQV------LTIEGQYLLSFGERGS 579
Query: 96 ---AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG--SMGNKAGQLEHPHYI 150
F +P +AV + I V+D+ NHRVQ+F ++G F+ K+G + N + P +
Sbjct: 580 RCGQFNYPWDVAVNSECQIAVSDTRNHRVQLFSAEGIFLRKYGFEATPNVWKHFDSPRGV 639
Query: 151 AVSNTNRVIVSDSNNHRVQIFD---VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
A +IV+D NNHRV + + +N RV + N Q P + V
Sbjct: 640 AFDPQGNLIVTDFNNHRVVMVEPDYLNVRVVVPESY---------NGVKQFLRPQGLIVD 690
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+ I+SDS +HR+QIF+ G + +G G+ +L P G+A+ G I V D GNN
Sbjct: 691 DEGNYIISDSRHHRIQIFNSAGVLKWKYGKYGTGLDELDRPSGIALTPDGRIVVVDFGNN 750
Query: 268 RIQIF 272
R+ +
Sbjct: 751 RVMLI 755
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 30 TPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH---- 85
T QYL G RGS G F +P +AV + I V+D+ NHRVQ+
Sbjct: 565 TIEGQYL------LSFGERGSRCGQFNYPWDVAVNSECQIAVSDTRNHRVQLFSAEGIFL 618
Query: 86 ----FDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG-NK 140
F+ N V+ F PRG+A P +++V D +NHRV + + D V N
Sbjct: 619 RKYGFEATPN-VWKHFDSPRGVAFDPQGNLIVTDFNNHRVVMVEPDYLNVRVVVPESYNG 677
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
Q P + V + I+SDS +HR+QIF+ S G K+G G +L+
Sbjct: 678 VKQFLRPQGLIVDDEGNYIISDSRHHRIQIFN-------SAGVLKWKYGKYGTGLDELDR 730
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIF 225
P IA++ R++V D N+RV +
Sbjct: 731 PSGIALTPDGRIVVVDFGNNRVMLI 755
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 44/79 (55%)
Query: 241 EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
E L P GV D +G I V D NNRIQIF DG +R FG G G EF GVAV
Sbjct: 486 ETDNLCRPWGVTCDKEGNIVVADRSNNRIQIFRQDGSLIRRFGKHGKGPVEFDRPAGVAV 545
Query: 301 MSNGNILVCDRENHRIQVF 319
I+V D++NHRIQV
Sbjct: 546 DGRRRIIVADKDNHRIQVL 564
>gi|260785696|ref|XP_002587896.1| hypothetical protein BRAFLDRAFT_87284 [Branchiostoma floridae]
gi|229273051|gb|EEN43907.1| hypothetical protein BRAFLDRAFT_87284 [Branchiostoma floridae]
Length = 1288
Score = 140 bits (353), Expect = 7e-31, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 149/305 (48%), Gaps = 33/305 (10%)
Query: 25 GQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--- 81
G GT S +K+ + G GSEPG F PRG+ V P N I V D N RVQV
Sbjct: 1004 GTEGTASGSTEDRKQDV-ITFGGMGSEPGKFWSPRGVVVSPSNEIFVTDLYNRRVQVHST 1062
Query: 82 ---CFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFG 135
HF P + + + ++ V ++++H VQ + +DGT + +F
Sbjct: 1063 EGVYLRHFPTAVPGTEDNVMEPHDVCMDGNGTLWVVGQRETADHVVQ-YSTDGTAMARFD 1121
Query: 136 SMGNKAGQLEHPHYIAVS-NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK 194
K G L IAV TN ++V D + V VF+ DG+ V +
Sbjct: 1122 L--EKIGYLRG---IAVDMRTNYILVIDCDQGEVH-------VFRPDGSLVRTVRH--PR 1167
Query: 195 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
AG++ P Y V ++VSD + H V ++D +G+ + FG EGS EGQLK+PRG++ D
Sbjct: 1168 AGEMTRPTYAKVDGEGNILVSDWDTHCVYVYDESGKFLFQFGGEGSGEGQLKYPRGISTD 1227
Query: 255 DQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
GYI V + N RIQIFT G+F+R F+ EG+AV G ++V R NH
Sbjct: 1228 STGYIVVAEHDNRRIQIFTRHGEFVRTV------HTGFRP-EGLAVGPEGQLVVTSRWNH 1280
Query: 315 RIQVF 319
+ VF
Sbjct: 1281 TVTVF 1285
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 29/48 (60%)
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
FG +GS EGQL P G+ + G+I V DSGN RIQIFT + F
Sbjct: 354 FGGKGSGEGQLTGPAGICTNSSGHILVADSGNERIQIFTRLSSYFYLF 401
Score = 42.4 bits (98), Expect = 0.31, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ FG GSG+G+ G G+ S+G+ILV D N RIQ+F
Sbjct: 352 QQFGGKGSGEGQLTGPAGICTNSSGHILVADSGNERIQIF 391
Score = 38.5 bits (88), Expect = 4.1, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
+FG G+ GQL P I +++ ++V+DS N R+QIF
Sbjct: 353 QFGGKGSGEGQLTGPAGICTNSSGHILVADSGNERIQIF 391
Score = 38.5 bits (88), Expect = 4.1, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
+FG G+ GQL P I +++ ++V+DS N R+QIF
Sbjct: 353 QFGGKGSGEGQLTGPAGICTNSSGHILVADSGNERIQIF 391
>gi|340381698|ref|XP_003389358.1| PREDICTED: tripartite motif-containing protein 2-like [Amphimedon
queenslandica]
Length = 582
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 161/380 (42%), Gaps = 107/380 (28%)
Query: 45 IGSRGSEPGCFTWPRGIAVGP-DNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
IG GS P F P GIA+ P + +AD+ NHR+QV P DL + F +
Sbjct: 205 IGKEGSGPLQFKHPSGIAIFPLTGQVYIADAGNHRIQVFNP--DLTFSHSFGSEGSADGQ 262
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ------------- 143
F +P IA+ + VADS NHR+Q F DG F+G+FG+ G+ GQ
Sbjct: 263 FKYPLDIAIDSQGLVYVADSWNHRIQKFSPDGMFMGQFGTRGSDPGQLNSPVVQVYDVLL 322
Query: 144 ------------------------LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ 179
L+ P +A+S+ N +I+++ H V I D G+
Sbjct: 323 NDTSMVIPFNPYLDNITPVHTITELKRPWGVAISDDNLLIITEYCGHCVTILDKEGKKVI 382
Query: 180 S------------------------DGTFVGKFGSMGNKAGQLEHPHYIAVSNT-NRVIV 214
S DG + G G+ Q ++P IA+S +
Sbjct: 383 SLGGEEGSDKFILVSDSHRIQKISMDGYRIASVGQKGSGPLQFKYPRGIAISPILGHFYI 442
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS-------------- 260
+D +NHR+Q+ + + SFGS GS GQ + PR +A+D+QG I
Sbjct: 443 ADEDNHRIQVLNPDLTFSHSFGSRGSANGQFQHPRDIAIDNQGLIYMESLWVTFGTEGSG 502
Query: 261 ---------------------VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVA 299
V + GNNRI +FT DG F+ +FG WGS + +F G+
Sbjct: 503 PGQLNTPVGIAIDTAATSLVYVSELGNNRISVFTSDGVFVSSFGRWGSNNYKFYSPYGLT 562
Query: 300 VMSNGNILVCDRENHRIQVF 319
+ + VCD +N ++ V+
Sbjct: 563 FDEDEFLYVCDHDNGQLVVY 582
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 148/337 (43%), Gaps = 100/337 (29%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV-------------FLAFTWPR 101
F PRG+A+ PD I+V+DS HR+Q K N V L F P
Sbjct: 170 FFSPRGVAITPDKFILVSDS--HRIQ--------KLNMVGYRITSIGKEGSGPLQFKHPS 219
Query: 102 GIAVGP-DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
GIA+ P + +AD+ NHR+QVF D TF FGS G+ GQ ++P IA+ + V V
Sbjct: 220 GIAIFPLTGQVYIADAGNHRIQVFNPDLTFSHSFGSEGSADGQFKYPLDIAIDSQGLVYV 279
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP------------------- 201
+DS NHR+Q F DG F+G+FG+ G+ GQL P
Sbjct: 280 ADSWNHRIQ-------KFSPDGMFMGQFGTRGSDPGQLNSPVVQVYDVLLNDTSMVIPFN 332
Query: 202 ---------HYI---------AVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSE----- 238
H I A+S+ N +I+++ H V I D G+ + S G E
Sbjct: 333 PYLDNITPVHTITELKRPWGVAISDDNLLIITEYCGHCVTILDKEGKKVISLGGEEGSDK 392
Query: 239 --------------------------GSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQI 271
GS Q K+PRG+A+ G+ + D N+RIQ+
Sbjct: 393 FILVSDSHRIQKISMDGYRIASVGQKGSGPLQFKYPRGIAISPILGHFYIADEDNHRIQV 452
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
PD F +FG GS +G+F+ +A+ + G I +
Sbjct: 453 LNPDLTFSHSFGSRGSANGQFQHPRDIAIDNQGLIYM 489
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 146/338 (43%), Gaps = 85/338 (25%)
Query: 58 PRGIAVGPDNSIVVADSSNH------RVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSI 111
P G+A+ PDN +++ ++ +H R K + F PRG+A+ PD I
Sbjct: 125 PWGVAITPDNHVILTENWSHCVTMLDRKGKKVKSLGGKGGGGKVKFFSPRGVAITPDKFI 184
Query: 112 VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDSNNHRVQI 170
+V+DS HR+Q G + G G+ Q +HP IA+ T +V ++D+ NHR+Q
Sbjct: 185 LVSDS--HRIQKLNMVGYRITSIGKEGSGPLQFKHPSGIAIFPLTGQVYIADAGNHRIQ- 241
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VF D TF FGS G+ GQ ++P IA+ + V V+DS NHR+Q F +G
Sbjct: 242 ------VFNPDLTFSHSFGSEGSADGQFKYPLDIAIDSQGLVYVADSWNHRIQKFSPDGM 295
Query: 231 VITSFGSEGSEEGQ-------------------------------------LKFPRGVAV 253
+ FG+ GS+ GQ LK P GVA+
Sbjct: 296 FMGQFGTRGSDPGQLNSPVVQVYDVLLNDTSMVIPFNPYLDNITPVHTITELKRPWGVAI 355
Query: 254 DDQGYISVGD-------------------------------SGNNRIQIFTPDGQFLRAF 282
D + + + S ++RIQ + DG + +
Sbjct: 356 SDDNLLIITEYCGHCVTILDKEGKKVISLGGEEGSDKFILVSDSHRIQKISMDGYRIASV 415
Query: 283 GCWGSGDGEFKGLEGVAVMS-NGNILVCDRENHRIQVF 319
G GSG +FK G+A+ G+ + D +NHRIQV
Sbjct: 416 GQKGSGPLQFKYPRGIAISPILGHFYIADEDNHRIQVL 453
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 9/177 (5%)
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
L+ P +A++ N VI++++ +H V + D + G G + P
Sbjct: 122 LKRPWGVAITPDNHVILTENWSHCVTMLD------RKGKKVKSLGGKGGGGKVKFFSPRG 175
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV-DDQGYISVG 262
+A++ ++VSDS HR+Q ++ G ITS G EGS Q K P G+A+ G + +
Sbjct: 176 VAITPDKFILVSDS--HRIQKLNMVGYRITSIGKEGSGPLQFKHPSGIAIFPLTGQVYIA 233
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D+GN+RIQ+F PD F +FG GS DG+FK +A+ S G + V D NHRIQ F
Sbjct: 234 DAGNHRIQVFNPDLTFSHSFGSEGSADGQFKYPLDIAIDSQGLVYVADSWNHRIQKF 290
>gi|432093067|gb|ELK25357.1| Tripartite motif-containing protein 2 [Myotis davidii]
Length = 801
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 122/221 (55%), Gaps = 12/221 (5%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT +G+A I++ADS+N VQ+F +DG F +FG G GQL+ P +AV +
Sbjct: 486 FTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSG 545
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+I++D +N V IF SDG F K GS G+L P ++V +IV D
Sbjct: 546 DIIIADYDNKWVSIF-------SSDGKFKTKIGS-----GKLMGPKGVSVDRNGHIIVVD 593
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ V IF NG+++T FGS G+ + Q P AV+ I V D N+ +++F +G
Sbjct: 594 NKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEG 653
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
+F+ FG G G+G+F GVAV SNGNI+V D N RIQ
Sbjct: 654 EFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQ 694
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 127/253 (50%), Gaps = 25/253 (9%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 621
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
PH+ AV++ N +IV+D +NH V++F+ G + FGS G GQ P GVAVD G
Sbjct: 622 FAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNG 681
Query: 258 YISVGDSGNNRIQ 270
I V D GN+RIQ
Sbjct: 682 NIIVADWGNSRIQ 694
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 141/299 (47%), Gaps = 40/299 (13%)
Query: 42 QFK--IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
QFK G RG PG P G+AV P I++AD N V + KT
Sbjct: 518 QFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGSGKLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G++V + I+V D+ V +FQ +G V +FGS GN Q PH+ AV++ N +I
Sbjct: 578 PKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEII 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +VF +G F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGS-EGSEEGQLKFPRGVAVDDQGY------------------IS 260
R+Q +GR +GS + +L A D G+ +S
Sbjct: 691 SRIQ---GSGRQPLDLTDHQGSTDHRL------ATADPGHSPPVCKNISMIWWPMACSLS 741
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V S + ++F G FL S D + G +G+A+ S+G+++V D NH +V+
Sbjct: 742 VTLSVRRKSKVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFKVY 797
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 12/190 (6%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+ + G+ G G+ + +A S + +++++DSNN VQIF +DG F +FG
Sbjct: 472 LIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF-------SNDGQFKSRFG 524
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
G GQL+ P +AV + +I++D +N V IF +G+ T GS G+L P+
Sbjct: 525 IRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS-----GKLMGPK 579
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
GV+VD G+I V D+ + IF P+G+ + FG G+GD +F G AV SN I+V
Sbjct: 580 GVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIVT 639
Query: 310 DRENHRIQVF 319
D NH ++VF
Sbjct: 640 DFHNHSVKVF 649
>gi|260785744|ref|XP_002587920.1| hypothetical protein BRAFLDRAFT_87308 [Branchiostoma floridae]
gi|229273075|gb|EEN43931.1| hypothetical protein BRAFLDRAFT_87308 [Branchiostoma floridae]
Length = 800
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 150/287 (52%), Gaps = 39/287 (13%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTW 99
G +GSEPG F + RG+ V P N I VAD N RVQV +F +
Sbjct: 537 GGKGSEPGKFKFLRGVVVSPSNEICVADMGNRRVQVHSMEGVYLRNFPTVVPGTGESTML 596
Query: 100 PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY---IAV- 152
PR + + + ++ V +++ H VQ + +DG + +F L+ H IAV
Sbjct: 597 PRDVCMDSNGTLWVVGEGETAEHVVQ-YSTDGAAMARF--------DLKKSHNFRGIAVD 647
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
+ TN ++V+D+ N VQ VF+ DG+ V ++ + G++++PHY+ V +
Sbjct: 648 TRTNHILVTDAANTEVQ-------VFRPDGSLVR---TVRHPEGEMKYPHYVTVDGEGNI 697
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+VSD + V ++D +G+ + FG +GS EGQL +PRG+ G+I V D+ N R+QIF
Sbjct: 698 LVSDWRSDSVYVYDESGKFLFQFGGKGSGEGQLMYPRGICTGSSGHILVADNENRRVQIF 757
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
T G+F+R F FK G+AV G ++V D+ NH + VF
Sbjct: 758 TRHGEFVRTFRTG------FKPT-GLAVGPEGQLVVTDQPNHTLAVF 797
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 42/225 (18%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ-------------- 179
FG G++ G+ + + VS +N + V+D N RVQ+ + G +
Sbjct: 536 FGGKGSEPGKFKFLRGVVVSPSNEICVADMGNRRVQVHSMEGVYLRNFPTVVPGTGESTM 595
Query: 180 --------SDGTF-----------VGKFGSMGNKAGQ--LEHPHY---IAV-SNTNRVIV 214
S+GT V ++ + G + L+ H IAV + TN ++V
Sbjct: 596 LPRDVCMDSNGTLWVVGEGETAEHVVQYSTDGAAMARFDLKKSHNFRGIAVDTRTNHILV 655
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+D+ N VQ+F +G ++ + EG++K+P V VD +G I V D ++ + ++
Sbjct: 656 TDAANTEVQVFRPDGSLVRTV---RHPEGEMKYPHYVTVDGEGNILVSDWRSDSVYVYDE 712
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+FL FG GSG+G+ G+ S+G+ILV D EN R+Q+F
Sbjct: 713 SGKFLFQFGGKGSGEGQLMYPRGICTGSSGHILVADNENRRVQIF 757
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G +GS G +PRGI G I+VAD+ N RVQ+ H + F
Sbjct: 710 YDESGKFLFQFGGKGSGEGQLMYPRGICTGSSGHILVADNENRRVQIFTRHGEFVRT--F 767
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
P G+AVGP+ +VV D NH + VF
Sbjct: 768 RTGFKPTGLAVGPEGQLVVTDQPNHTLAVF 797
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ +FG +GSE G+ KF RGV V I V D GN R+Q+ + +G +LR F G GE
Sbjct: 533 VVTFGGKGSEPGKFKFLRGVVVSPSNEICVADMGNRRVQVHSMEGVYLRNFPTVVPGTGE 592
Query: 292 FKGL-EGVAVMSNGNILVC 309
L V + SNG + V
Sbjct: 593 STMLPRDVCMDSNGTLWVV 611
>gi|410917736|ref|XP_003972342.1| PREDICTED: tripartite motif-containing protein 2-like isoform 2
[Takifugu rubripes]
Length = 760
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 149/288 (51%), Gaps = 30/288 (10%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT-----WP 100
G++G G FT +G+ +++ADS+N VQV + T P
Sbjct: 485 GTKGRNKGEFTNLQGVTAS-QGKVLIADSNNQCVQVFSNDGQFRMRFGIRGRTPGQLQRP 543
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+AV P+ I++AD N V +F S+G F K GS G+L P ++V +IV
Sbjct: 544 TGVAVHPNGDIIIADYDNKWVSIFSSEGKFKNKIGS-----GKLMGPKGVSVDRNGHIIV 598
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL---------EHPHYIAVSNTNR 211
D+ + V IF +NG++ V KFG+ GN Q + PH+ A+++ N
Sbjct: 599 VDNKSCCVFIFQLNGKL-------VTKFGNRGNGDRQFADFLDFVFYQGPHFAAINSNNE 651
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
+IV+D +NH V++F+ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 652 IIVTDFHNHSVKVFNTDGEFLLKFGSNGEGNGQFNAPTGVAVDVNGNIIVADWGNSRIQV 711
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL S D + G +G+A+ S+G+++V D NH +++
Sbjct: 712 FDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFKIY 756
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 124/242 (51%), Gaps = 19/242 (7%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ + + G RG PG P G+AV P+ I++AD N V + K
Sbjct: 525 QFRMRFGIRGRTPGQLQRPTGVAVHPNGDIIIADYDNKWVSIFSSEGKFKNKIGSGKLMG 584
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQL---------EHPHYI 150
P+G++V + I+V D+ + V +FQ +G V KFG+ GN Q + PH+
Sbjct: 585 PKGVSVDRNGHIIVVDNKSCCVFIFQLNGKLVTKFGNRGNGDRQFADFLDFVFYQGPHFA 644
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
A+++ N +IV+D +NH V +VF +DG F+ KFGS G GQ P +AV
Sbjct: 645 AINSNNEIIVTDFHNHSV-------KVFNTDGEFLLKFGSNGEGNGQFNAPTGVAVDVNG 697
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
+IV+D N R+Q+FD +G ++ + L P+G+A+ G++ V DSGN+ +
Sbjct: 698 NIIVADWGNSRIQVFDGSGSFLSYINTSADP---LYGPQGLALTSDGHVVVADSGNHCFK 754
Query: 271 IF 272
I+
Sbjct: 755 IY 756
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
K GS G G F P G+AV + +I+VAD N R+QV FD + FL++
Sbjct: 673 LKFGSNGEGNGQFNAPTGVAVDVNGNIIVADWGNSRIQV----FDGSGS--FLSYINTSA 726
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH ++++
Sbjct: 727 DPLYGPQGLALTSDGHVVVADSGNHCFKIYR 757
>gi|110637575|ref|YP_677782.1| hypothetical protein CHU_1167 [Cytophaga hutchinsonii ATCC 33406]
gi|110280256|gb|ABG58442.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
Length = 588
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 150/313 (47%), Gaps = 32/313 (10%)
Query: 19 LLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHR 78
LL+S + +G YL +R+L SR + F P GI V N++ V+D R
Sbjct: 11 LLISALQFIGIASAQNYLFERKLSGYKNSRIAP--VFISPLGIVVDSVNNVYVSDID--R 66
Query: 79 VQVCFPHFDLKTNCVFLAFTWPR------------GIAVGPDNSIVVADSSNHRVQVFQS 126
VQ FD K L W R +A+ + V D RVQ
Sbjct: 67 VQ----KFDAKGT---LLKKWGRFGFGEGQFSDASRMAIDKQGFLYVLDG--FRVQKMTL 117
Query: 127 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVG 186
DG FV K+G G G+ IA+ + N + V+D NH VQ F SDG F+
Sbjct: 118 DGQFVTKWGRYGTHEGEFSFLTGIAIDSMNNIYVTDRANHCVQ-------KFTSDGVFLK 170
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
K+G +G + GQL P I + + ++D++NHR+Q F+ +G ++ S+GS G +GQ
Sbjct: 171 KWGVLGKEPGQLNEPEDIVIDTYGFLYIADASNHRIQKFNGDGEMVASWGSYGEGKGQFN 230
Query: 247 FPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNI 306
+P G+A+D + ++ V D N RIQ + G F+ +G G F + G+A+ ++ NI
Sbjct: 231 YPNGLAIDKKNHLFVVDYNNTRIQELSNTGVFIAKWGKIGDKPNHFNAITGIALDASDNI 290
Query: 307 LVCDRENHRIQVF 319
+ N R+Q F
Sbjct: 291 YTVEAGNQRVQKF 303
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 143/333 (42%), Gaps = 71/333 (21%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW---- 99
K G G+ G F++ GIA+ N+I V D +NH VQ ++ VFL W
Sbjct: 124 KWGRYGTHEGEFSFLTGIAIDSMNNIYVTDRANHCVQ------KFTSDGVFLK-KWGVLG 176
Query: 100 --------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P I + + +AD+SNHR+Q F DG V +GS G GQ +P+ +A
Sbjct: 177 KEPGQLNEPEDIVIDTYGFLYIADASNHRIQKFNGDGEMVASWGSYGEGKGQFNYPNGLA 236
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
+ N + V D NN R+Q + G F+ K+G +G+K IA+ ++
Sbjct: 237 IDKKNHLFVVDYNNTRIQ-------ELSNTGVFIAKWGKIGDKPNHFNAITGIALDASDN 289
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGV-------------------- 251
+ ++ N RVQ F G + +G+ + Q FP V
Sbjct: 290 IYTVEAGNQRVQKFTNQGHYVLLWGNPLGQNEQFYFPFNVVLDRANNVYVMDINYIQKFS 349
Query: 252 -------------------------AVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
A+D G + + D + I F+PDGQ + +G +G
Sbjct: 350 PTGDFIQKWGNIGSWNNTYGNLADFAIDHAGNVYIADDQKHCIMKFSPDGQMISTWGNYG 409
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
SG+G+F +A+ + NI V DR+NHR+Q F
Sbjct: 410 SGNGQFNDPIALAIDGDDNIYVVDRDNHRVQKF 442
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 137/325 (42%), Gaps = 59/325 (18%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--------- 96
GS G G F +P G+A+ N + V D +N R+Q +L VF+A
Sbjct: 220 GSYGEGKGQFNYPNGLAIDKKNHLFVVDYNNTRIQ------ELSNTGVFIAKWGKIGDKP 273
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F GIA+ ++I ++ N RVQ F + G +V +G+ + Q P + +
Sbjct: 274 NHFNAITGIALDASDNIYTVEAGNQRVQKFTNQGHYVLLWGNPLGQNEQFYFPFNVVLDR 333
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQS---------------------------------- 180
N V V D N +Q F G Q
Sbjct: 334 ANNVYVMDIN--YIQKFSPTGDFIQKWGNIGSWNNTYGNLADFAIDHAGNVYIADDQKHC 391
Query: 181 ------DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
DG + +G+ G+ GQ P +A+ + + V D +NHRVQ F+ NG ++
Sbjct: 392 IMKFSPDGQMISTWGNYGSGNGQFNDPIALAIDGDDNIYVVDRDNHRVQKFNSNGDFLSK 451
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
+G +G+ + +A+D +G I + DS +Q FT G+F+ +G G+ +G+F
Sbjct: 452 WGQQGTGASHFSWLADIAIDAKGDIYIVDSQTREVQKFTNTGEFITKWGGQGTTNGKFLT 511
Query: 295 LEGVAVMSNGNILVCDRENHRIQVF 319
G+ G+I V D E + IQ F
Sbjct: 512 PIGIGACPAGDIYVSDLERNCIQKF 536
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 104/216 (48%), Gaps = 7/216 (3%)
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 163
A+ ++ +AD H + F DG + +G+ G+ GQ P +A+ + + V D
Sbjct: 375 AIDHAGNVYIADDQKHCIMKFSPDGQMISTWGNYGSGNGQFNDPIALAIDGDDNIYVVDR 434
Query: 164 NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
+NHRVQ F+ S+G F+ K+G G A IA+ + + DS VQ
Sbjct: 435 DNHRVQKFN-------SNGDFLSKWGQQGTGASHFSWLADIAIDAKGDIYIVDSQTREVQ 487
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
F G IT +G +G+ G+ P G+ G I V D N IQ F+ G F+ G
Sbjct: 488 KFTNTGEFITKWGGQGTTNGKFLTPIGIGACPAGDIYVSDLERNCIQKFSNTGTFITVIG 547
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G DG+F+ GVA+ S G++ + D +N+ +Q F
Sbjct: 548 GPGIDDGQFQSPRGVAIDSFGSLYIADADNNCVQKF 583
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 85/178 (47%), Gaps = 7/178 (3%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P +A+ D++I V D NHRVQ F S+G F+ K+G G A IA+
Sbjct: 415 FNDPIALAIDGDDNIYVVDRDNHRVQKFNSNGDFLSKWGQQGTGASHFSWLADIAIDAKG 474
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ + DS VQ F + G F+ K+G G G+ P I + VSD
Sbjct: 475 DIYIVDSQTREVQ-------KFTNTGEFITKWGGQGTTNGKFLTPIGIGACPAGDIYVSD 527
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ +Q F G IT G G ++GQ + PRGVA+D G + + D+ NN +Q F P
Sbjct: 528 LERNCIQKFSNTGTFITVIGGPGIDDGQFQSPRGVAIDSFGSLYIADADNNCVQKFAP 585
>gi|357612731|gb|EHJ68146.1| hypothetical protein KGM_14979 [Danaus plexippus]
Length = 603
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 122/239 (51%), Gaps = 22/239 (9%)
Query: 93 VFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
V +AF P G I V D H + VF DG ++ G G++ G L P IA
Sbjct: 375 VHIAFMKPLG-------EIYVTDKWKHCIHVFSKDGDYLRSLGQKGSRVGMLRSPEGIAT 427
Query: 153 SN-TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAG----------QLEHP 201
N +N++ V D+ N RVQ+ D G+ G V N A + P
Sbjct: 428 DNISNQIYVVDTGNDRVQVLDTEGKFIDQYG--VATRAQTSNTANVWTQQETLCTEFNAP 485
Query: 202 HYIAVSNTNRVIVSDSNNHRVQIFDVNGR-VITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
+AV+ +RVIV DS N RV+I++ + IT FGS G +GQ + P + VD G+I
Sbjct: 486 TAVAVTK-DRVIVLDSGNRRVKIYNKQDKNKITEFGSLGHRKGQFRQPEVLTVDPLGFIL 544
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
VGDSGN R+QIF P+GQ +R FG G+ G+F + G+ V +I+V D +NH + F
Sbjct: 545 VGDSGNCRVQIFKPNGQLVRVFGGLGADPGKFGWISGIYVTKQLDIIVSDTKNHNVNFF 603
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 17/140 (12%)
Query: 196 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD 255
G L H + + V+D H + +F +G + S G +GS G L+ P G+A D+
Sbjct: 370 GMLCPVHIAFMKPLGEIYVTDKWKHCIHVFSKDGDYLRSLGQKGSRVGMLRSPEGIATDN 429
Query: 256 -QGYISVGDSGNNRIQIFTPDGQFLRAFG------------CWGSGD---GEFKGLEGVA 299
I V D+GN+R+Q+ +G+F+ +G W + EF VA
Sbjct: 430 ISNQIYVVDTGNDRVQVLDTEGKFIDQYGVATRAQTSNTANVWTQQETLCTEFNAPTAVA 489
Query: 300 VMSNGNILVCDRENHRIQVF 319
V + ++V D N R++++
Sbjct: 490 V-TKDRVIVLDSGNRRVKIY 508
>gi|50949307|emb|CAB53687.2| hypothetical protein [Homo sapiens]
Length = 229
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 120/220 (54%), Gaps = 15/220 (6%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+AV P I++AD N V +F SDG F K GS G+L P ++V +I
Sbjct: 21 PTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS-----GKLMGPKGVSVDRNGHII 75
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D N +F +FQ +G V +FGS GN Q PH+ AV++ N +I++D +N
Sbjct: 76 VVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHN 128
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
H V++F+ G + FGS G GQ P GVAVD G I V D GN+RIQ+F G FL
Sbjct: 129 HSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFL 188
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
S D G +G+A+ S+G+++V D NH +V+
Sbjct: 189 SYINT--SAD-PLYGPQGLALTSDGHVVVADSGNHCFKVY 225
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 122/233 (52%), Gaps = 12/233 (5%)
Query: 42 QFK--IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
QFK G RG PG P G+AV P I++AD N V + KT
Sbjct: 3 QFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGSGKLMG 62
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G++V + I+V D+ V +FQ +G V +FGS GN Q PH+ AV++ N +I
Sbjct: 63 PKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEII 122
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
++D +NH V +VF +G F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 123 ITDFHNHSV-------KVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGN 175
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
R+Q+FD +G ++ + L P+G+A+ G++ V DSGN+ +++
Sbjct: 176 SRIQVFDGSGSFLSYINTSADP---LYGPQGLALTSDGHVVVADSGNHCFKVY 225
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 181 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGS 240
DG F +FG G GQL+ P +AV + +I++D +N V IF +G+ T GS
Sbjct: 1 DGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS--- 57
Query: 241 EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
G+L P+GV+VD G+I V D+ + IF P+G+ + FG G+GD +F G AV
Sbjct: 58 --GKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAV 115
Query: 301 MSNGNILVCDRENHRIQVF 319
SN I++ D NH ++VF
Sbjct: 116 NSNNEIIITDFHNHSVKVF 134
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC--FPHFDLKTNC 92
+ Q+ K GS G G F P G+AV + +I+VAD N R+QV F N
Sbjct: 134 FNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINT 193
Query: 93 VFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH +V++
Sbjct: 194 SADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 226
>gi|195172812|ref|XP_002027190.1| GL20119 [Drosophila persimilis]
gi|194113003|gb|EDW35046.1| GL20119 [Drosophila persimilis]
Length = 820
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 122/229 (53%), Gaps = 11/229 (4%)
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
+ + P G+ V ++V+D N+RVQVF DG+ KFG G G+ + P I V
Sbjct: 535 LVKVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDLPAGICVD 594
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
NR+IV D +NHRVQIF + G F+ KFGS G + GQ ++P +AV++ +++
Sbjct: 595 VDNRIIVVDKDNHRVQIF-------TASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIV 647
Query: 214 VSDSNNHRVQIFDVNGRVITS--FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
V+DS NHR+Q FD GR I F + G +G + PRGV G I V D N+ + +
Sbjct: 648 VTDSRNHRIQQFDSEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNIIVSDFDNHCLYL 706
Query: 272 FTPD-GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
PD L G GSG EF G+ G I+V D +N RI VF
Sbjct: 707 IDPDINDILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVF 755
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 125/239 (52%), Gaps = 17/239 (7%)
Query: 52 PGCF-----TWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-----AFTWPR 101
PGC + P G+ V ++V+D N+RVQV P LK F P
Sbjct: 530 PGCMDLVKVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDLPA 589
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
GI V DN I+V D NHRVQ+F + G F+ KFGS G + GQ ++P +AV++ +++V+
Sbjct: 590 GICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIVVT 649
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
DS NHR+Q FD GR + F + G G + P + + T +IVSD +NH
Sbjct: 650 DSRNHRIQQFDSEGRFIRQ-----IVFDNHGQTKG-IASPRGVCYTPTGNIIVSDFDNHC 703
Query: 222 VQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
+ + D + +++ G EGS + P G+ DD+G I V DS N RI +F + F+
Sbjct: 704 LYLIDPDINDILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVFNQNLDFM 762
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 95/201 (47%), Gaps = 26/201 (12%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L+FK G +G G F P GI V DN I+V D NHRVQ+ + VFL
Sbjct: 571 LKFKFGRKGVGNGEFDLPAGICVDVDNRIIVVDKDNHRVQI------FTASGVFLLKFGS 624
Query: 97 -------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGK--FGSMGNKAGQLEHP 147
F +P +AV IVV DS NHR+Q F S+G F+ + F + G G + P
Sbjct: 625 YGKEYGQFQYPWDVAVNSRRQIVVTDSRNHRIQQFDSEGRFIRQIVFDNHGQTKG-IASP 683
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
+ + T +IVSD +NH + + D + + G G+ + P +
Sbjct: 684 RGVCYTPTGNIIVSDFDNHCLYLIDPD------INDILSVKGHEGSGFHEFNRPSGLCCD 737
Query: 208 NTNRVIVSDSNNHRVQIFDVN 228
+ R+IV+DS N R+ +F+ N
Sbjct: 738 DEGRIIVADSKNQRILVFNQN 758
>gi|195401555|ref|XP_002059378.1| GJ18454 [Drosophila virilis]
gi|194142384|gb|EDW58790.1| GJ18454 [Drosophila virilis]
Length = 822
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 120/223 (53%), Gaps = 11/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ V ++V+D N+RVQVF DG+ KFG G G+ + P I V NR+I
Sbjct: 543 PWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDLPAGICVDVDNRII 602
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D +NHRVQIF + G F+ KFGS G + GQ ++P +AV++ +++V+DS N
Sbjct: 603 VVDKDNHRVQIF-------TASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIVVTDSRN 655
Query: 220 HRVQIFDVNGRVITS--FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD-G 276
HR+Q FD GR I F + G +G + PRGV G I V D N+ + + PD
Sbjct: 656 HRIQQFDSEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNIIVSDFDNHCLYLIDPDIN 714
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L G GSG EF G+ G I+V D +N RI VF
Sbjct: 715 DILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVF 757
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 130/247 (52%), Gaps = 16/247 (6%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L + G E G + P G+ V ++V+D N+RVQV P LK
Sbjct: 526 LSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNG 585
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GI V DN I+V D NHRVQ+F + G F+ KFGS G + GQ ++P +AV++
Sbjct: 586 EFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSR 645
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK--FGSMGNKAGQLEHPHYIAVSNTNRVI 213
+++V+DS NHR+Q FD S+G F+ + F + G G + P + + T +I
Sbjct: 646 RQIVVTDSRNHRIQQFD-------SEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNII 697
Query: 214 VSDSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
VSD +NH + + D + +++ G EGS + P G+ DD+G I V DS N RI +F
Sbjct: 698 VSDFDNHCLYLIDPDINDILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVF 757
Query: 273 TPDGQFL 279
+ F+
Sbjct: 758 NQNLDFM 764
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
F + G++ GQ+ P + V V+VSD N+RVQ VF DG+ KFG G
Sbjct: 530 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQ-------VFNPDGSLKFKFGRKGV 582
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
G+ + P I V NR+IV D +NHRVQIF +G + FGS G E GQ ++P VAV
Sbjct: 583 GNGEFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAV 642
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL---EGVAVMSNGNILVCD 310
+ + I V DS N+RIQ F +G+F+R G+ KG+ GV GNI+V D
Sbjct: 643 NSRRQIVVTDSRNHRIQQFDSEGRFIRQI--VFDNHGQTKGIASPRGVCYTPTGNIIVSD 700
Query: 311 RENH 314
+NH
Sbjct: 701 FDNH 704
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 74/132 (56%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
F + G++ GQ+ P + V V+VSD N+RVQ+F+ +G + FG +G G+
Sbjct: 530 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDL 589
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+ VD I V D N+R+QIFT G FL FG +G G+F+ VAV S I+
Sbjct: 590 PAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIV 649
Query: 308 VCDRENHRIQVF 319
V D NHRIQ F
Sbjct: 650 VTDSRNHRIQQF 661
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
SF +EG E+GQ+ P G+ VD G++ V D NNR+Q+F PDG FG G G+GEF
Sbjct: 529 SFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFD 588
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ V + I+V D++NHR+Q+F
Sbjct: 589 LPAGICVDVDNRIIVVDKDNHRVQIF 614
>gi|219851493|ref|YP_002465925.1| NHL repeat containing protein [Methanosphaerula palustris E1-9c]
gi|219545752|gb|ACL16202.1| NHL repeat containing protein [Methanosphaerula palustris E1-9c]
Length = 390
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 129/260 (49%), Gaps = 40/260 (15%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+AV ++ VAD+ N R+Q F S GTFV +GS G GQ HP +AV V
Sbjct: 46 PGGVAVDSAGNVYVADTENDRIQKFTSSGTFVTVWGSSGTGIGQFAHPDGVAVDGAGAVY 105
Query: 160 VSDSNNHRVQIFDV--------------------------------------NGRV--FQ 179
V+D+ N R+Q F N RV F
Sbjct: 106 VADTENDRIQKFTSSGSFLGGWGSSGSGAGQFNAPTSLAVDGVGSIYVVDSWNDRVQKFT 165
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
S G+F+ +GS G+ G+ + P IAV T V V+D+ N+RVQ F G ++++G+ G
Sbjct: 166 SSGSFLAAWGSHGSGVGEFDEPFGIAVDGTGNVYVADTYNNRVQKFTSAGLFVSTWGTSG 225
Query: 240 SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVA 299
+ GQ +P GVAVD G + V D NNRIQ FT G F+ +G G+G G+F G+
Sbjct: 226 TGTGQFNWPWGVAVDSAGAVYVTDVWNNRIQKFTSAGLFVSTWGTSGTGPGQFTWPYGIT 285
Query: 300 VMSNGNILVCDRENHRIQVF 319
+ G + V D N+RI+VF
Sbjct: 286 IDGVGQVYVTDEWNNRIEVF 305
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 122/237 (51%), Gaps = 12/237 (5%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ-----VCFPHFDLKTNCVFLAFTWP 100
GS G+ G F P G+AV ++ VAD+ N R+Q F + F P
Sbjct: 81 GSSGTGIGQFAHPDGVAVDGAGAVYVADTENDRIQKFTSSGSFLGGWGSSGSGAGQFNAP 140
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
+AV SI V DS N RVQ F S G+F+ +GS G+ G+ + P IAV T V V
Sbjct: 141 TSLAVDGVGSIYVVDSWNDRVQKFTSSGSFLAAWGSHGSGVGEFDEPFGIAVDGTGNVYV 200
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+D+ N+RVQ F S G FV +G+ G GQ P +AV + V V+D N+
Sbjct: 201 ADTYNNRVQ-------KFTSAGLFVSTWGTSGTGTGQFNWPWGVAVDSAGAVYVTDVWNN 253
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
R+Q F G ++++G+ G+ GQ +P G+ +D G + V D NNRI++F G+
Sbjct: 254 RIQKFTSAGLFVSTWGTSGTGPGQFTWPYGITIDGVGQVYVTDEWNNRIEVFVSSGE 310
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 105/190 (55%), Gaps = 7/190 (3%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+ ++GS G GQ +HP +AV + V V+D+ N R+Q F S GTFV +G
Sbjct: 29 YSAQWGSSGAGIGQFDHPGGVAVDSAGNVYVADTENDRIQ-------KFTSSGTFVTVWG 81
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
S G GQ HP +AV V V+D+ N R+Q F +G + +GS GS GQ P
Sbjct: 82 SSGTGIGQFAHPDGVAVDGAGAVYVADTENDRIQKFTSSGSFLGGWGSSGSGAGQFNAPT 141
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+AVD G I V DS N+R+Q FT G FL A+G GSG GEF G+AV GN+ V
Sbjct: 142 SLAVDGVGSIYVVDSWNDRVQKFTSSGSFLAAWGSHGSGVGEFDEPFGIAVDGTGNVYVA 201
Query: 310 DRENHRIQVF 319
D N+R+Q F
Sbjct: 202 DTYNNRVQKF 211
>gi|195332129|ref|XP_002032751.1| GM20790 [Drosophila sechellia]
gi|194124721|gb|EDW46764.1| GM20790 [Drosophila sechellia]
Length = 832
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 120/223 (53%), Gaps = 11/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ V ++V+D N+RVQVF DG+ KFG G G+ + P I V NR+I
Sbjct: 553 PWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDLPAGICVDVDNRII 612
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D +NHRVQIF + G F+ KFGS G + GQ ++P +AV++ +++V+DS N
Sbjct: 613 VVDKDNHRVQIF-------TASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIVVTDSRN 665
Query: 220 HRVQIFDVNGRVITS--FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD-G 276
HR+Q FD GR I F + G +G + PRGV G I V D N+ + + PD
Sbjct: 666 HRIQQFDSEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNIIVSDFDNHCLYLIDPDIN 724
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L G GSG EF G+ G I+V D +N RI VF
Sbjct: 725 DILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVF 767
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 130/247 (52%), Gaps = 16/247 (6%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L + G E G + P G+ V ++V+D N+RVQV P LK
Sbjct: 536 LSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNG 595
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GI V DN I+V D NHRVQ+F + G F+ KFGS G + GQ ++P +AV++
Sbjct: 596 EFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSR 655
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK--FGSMGNKAGQLEHPHYIAVSNTNRVI 213
+++V+DS NHR+Q FD S+G F+ + F + G G + P + + T +I
Sbjct: 656 RQIVVTDSRNHRIQQFD-------SEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNII 707
Query: 214 VSDSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
VSD +NH + + D + +++ G EGS + P G+ DD+G I V DS N RI +F
Sbjct: 708 VSDFDNHCLYLIDPDINDILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVF 767
Query: 273 TPDGQFL 279
+ F+
Sbjct: 768 NQNLDFM 774
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
F + G++ GQ+ P + V V+VSD N+RVQ VF DG+ KFG G
Sbjct: 540 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQ-------VFNPDGSLKFKFGRKGV 592
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
G+ + P I V NR+IV D +NHRVQIF +G + FGS G E GQ ++P VAV
Sbjct: 593 GNGEFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAV 652
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL---EGVAVMSNGNILVCD 310
+ + I V DS N+RIQ F +G+F+R G+ KG+ GV GNI+V D
Sbjct: 653 NSRRQIVVTDSRNHRIQQFDSEGRFIRQI--VFDNHGQTKGIASPRGVCYTPTGNIIVSD 710
Query: 311 RENH 314
+NH
Sbjct: 711 FDNH 714
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 74/132 (56%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
F + G++ GQ+ P + V V+VSD N+RVQ+F+ +G + FG +G G+
Sbjct: 540 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDL 599
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+ VD I V D N+R+QIFT G FL FG +G G+F+ VAV S I+
Sbjct: 600 PAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIV 659
Query: 308 VCDRENHRIQVF 319
V D NHRIQ F
Sbjct: 660 VTDSRNHRIQQF 671
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
SF +EG E+GQ+ P G+ VD G++ V D NNR+Q+F PDG FG G G+GEF
Sbjct: 539 SFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFD 598
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ V + I+V D++NHR+Q+F
Sbjct: 599 LPAGICVDVDNRIIVVDKDNHRVQIF 624
>gi|22026822|ref|NP_524772.2| wech, isoform A [Drosophila melanogaster]
gi|24586264|ref|NP_724567.1| wech, isoform B [Drosophila melanogaster]
gi|24586266|ref|NP_724568.1| wech, isoform C [Drosophila melanogaster]
gi|221330031|ref|NP_001137614.1| wech, isoform D [Drosophila melanogaster]
gi|221330033|ref|NP_001137615.1| wech, isoform E [Drosophila melanogaster]
gi|33112286|sp|Q9V4M2.2|WECH_DROME RecName: Full=Protein wech; AltName: Full=Protein dappled
gi|21627782|gb|AAF59246.2| wech, isoform B [Drosophila melanogaster]
gi|21627783|gb|AAF59245.2| wech, isoform C [Drosophila melanogaster]
gi|21627784|gb|AAM68901.1| wech, isoform A [Drosophila melanogaster]
gi|33589578|gb|AAQ22556.1| LD02463p [Drosophila melanogaster]
gi|134085526|gb|ABO52822.1| FI01115p [Drosophila melanogaster]
gi|220902121|gb|ACL83068.1| wech, isoform D [Drosophila melanogaster]
gi|220902122|gb|ACL83069.1| wech, isoform E [Drosophila melanogaster]
Length = 832
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 120/223 (53%), Gaps = 11/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ V ++V+D N+RVQVF DG+ KFG G G+ + P I V NR+I
Sbjct: 553 PWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDLPAGICVDVDNRII 612
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D +NHRVQIF + G F+ KFGS G + GQ ++P +AV++ +++V+DS N
Sbjct: 613 VVDKDNHRVQIF-------TASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIVVTDSRN 665
Query: 220 HRVQIFDVNGRVITS--FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD-G 276
HR+Q FD GR I F + G +G + PRGV G I V D N+ + + PD
Sbjct: 666 HRIQQFDSEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNIIVSDFDNHCLYLIDPDIN 724
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L G GSG EF G+ G I+V D +N RI VF
Sbjct: 725 DILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVF 767
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 130/247 (52%), Gaps = 16/247 (6%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L + G E G + P G+ V ++V+D N+RVQV P LK
Sbjct: 536 LSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNG 595
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GI V DN I+V D NHRVQ+F + G F+ KFGS G + GQ ++P +AV++
Sbjct: 596 EFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSR 655
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK--FGSMGNKAGQLEHPHYIAVSNTNRVI 213
+++V+DS NHR+Q FD S+G F+ + F + G G + P + + T +I
Sbjct: 656 RQIVVTDSRNHRIQQFD-------SEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNII 707
Query: 214 VSDSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
VSD +NH + + D + +++ G EGS + P G+ DD+G I V DS N RI +F
Sbjct: 708 VSDFDNHCLYLIDPDINDILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVF 767
Query: 273 TPDGQFL 279
+ F+
Sbjct: 768 NQNLDFM 774
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
F + G++ GQ+ P + V V+VSD N+RVQ VF DG+ KFG G
Sbjct: 540 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQ-------VFNPDGSLKFKFGRKGV 592
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
G+ + P I V NR+IV D +NHRVQIF +G + FGS G E GQ ++P VAV
Sbjct: 593 GNGEFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAV 652
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL---EGVAVMSNGNILVCD 310
+ + I V DS N+RIQ F +G+F+R G+ KG+ GV GNI+V D
Sbjct: 653 NSRRQIVVTDSRNHRIQQFDSEGRFIRQI--VFDNHGQTKGIASPRGVCYTPTGNIIVSD 710
Query: 311 RENH 314
+NH
Sbjct: 711 FDNH 714
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 74/132 (56%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
F + G++ GQ+ P + V V+VSD N+RVQ+F+ +G + FG +G G+
Sbjct: 540 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDL 599
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+ VD I V D N+R+QIFT G FL FG +G G+F+ VAV S I+
Sbjct: 600 PAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIV 659
Query: 308 VCDRENHRIQVF 319
V D NHRIQ F
Sbjct: 660 VTDSRNHRIQQF 671
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
SF +EG E+GQ+ P G+ VD G++ V D NNR+Q+F PDG FG G G+GEF
Sbjct: 539 SFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFD 598
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ V + I+V D++NHR+Q+F
Sbjct: 599 LPAGICVDVDNRIIVVDKDNHRVQIF 624
>gi|198459519|ref|XP_001361408.2| GA14054 [Drosophila pseudoobscura pseudoobscura]
gi|198136718|gb|EAL25986.2| GA14054 [Drosophila pseudoobscura pseudoobscura]
Length = 828
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 120/223 (53%), Gaps = 11/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ V ++V+D N+RVQVF DG+ KFG G G+ + P I V NR+I
Sbjct: 549 PWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDLPAGICVDVDNRII 608
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D +NHRVQIF + G F+ KFGS G + GQ ++P +AV++ +++V+DS N
Sbjct: 609 VVDKDNHRVQIF-------TASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIVVTDSRN 661
Query: 220 HRVQIFDVNGRVITS--FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD-G 276
HR+Q FD GR I F + G +G + PRGV G I V D N+ + + PD
Sbjct: 662 HRIQQFDSEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNIIVSDFDNHCLYLIDPDIN 720
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L G GSG EF G+ G I+V D +N RI VF
Sbjct: 721 DILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVF 763
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 127/245 (51%), Gaps = 12/245 (4%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L + G E G + P G+ V ++V+D N+RVQV P LK
Sbjct: 532 LSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNG 591
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GI V DN I+V D NHRVQ+F + G F+ KFGS G + GQ ++P +AV++
Sbjct: 592 EFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSR 651
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+++V+DS NHR+Q FD GR + F + G G + P + + T +IVS
Sbjct: 652 RQIVVTDSRNHRIQQFDSEGRFIRQ-----IVFDNHGQTKG-IASPRGVCYTPTGNIIVS 705
Query: 216 DSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
D +NH + + D + +++ G EGS + P G+ DD+G I V DS N RI +F
Sbjct: 706 DFDNHCLYLIDPDINDILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVFNQ 765
Query: 275 DGQFL 279
+ F+
Sbjct: 766 NLDFM 770
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
F + G++ GQ+ P + V V+VSD N+RVQ VF DG+ KFG G
Sbjct: 536 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQ-------VFNPDGSLKFKFGRKGV 588
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
G+ + P I V NR+IV D +NHRVQIF +G + FGS G E GQ ++P VAV
Sbjct: 589 GNGEFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAV 648
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL---EGVAVMSNGNILVCD 310
+ + I V DS N+RIQ F +G+F+R G+ KG+ GV GNI+V D
Sbjct: 649 NSRRQIVVTDSRNHRIQQFDSEGRFIRQI--VFDNHGQTKGIASPRGVCYTPTGNIIVSD 706
Query: 311 RENH 314
+NH
Sbjct: 707 FDNH 710
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 74/132 (56%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
F + G++ GQ+ P + V V+VSD N+RVQ+F+ +G + FG +G G+
Sbjct: 536 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDL 595
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+ VD I V D N+R+QIFT G FL FG +G G+F+ VAV S I+
Sbjct: 596 PAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIV 655
Query: 308 VCDRENHRIQVF 319
V D NHRIQ F
Sbjct: 656 VTDSRNHRIQQF 667
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
SF +EG E+GQ+ P G+ VD G++ V D NNR+Q+F PDG FG G G+GEF
Sbjct: 535 SFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFD 594
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ V + I+V D++NHR+Q+F
Sbjct: 595 LPAGICVDVDNRIIVVDKDNHRVQIF 620
>gi|195119398|ref|XP_002004218.1| GI19797 [Drosophila mojavensis]
gi|193909286|gb|EDW08153.1| GI19797 [Drosophila mojavensis]
Length = 815
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 120/223 (53%), Gaps = 11/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ V ++V+D N+RVQVF DG+ KFG G G+ + P I V NR+I
Sbjct: 536 PWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDLPAGICVDVDNRII 595
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D +NHRVQIF + G F+ KFGS G + GQ ++P +AV++ +++V+DS N
Sbjct: 596 VVDKDNHRVQIF-------TASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIVVTDSRN 648
Query: 220 HRVQIFDVNGRVITS--FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD-G 276
HR+Q FD GR I F + G +G + PRGV G I V D N+ + + PD
Sbjct: 649 HRIQQFDSEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNIIVSDFDNHCLYLIDPDIN 707
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L G GSG EF G+ G I+V D +N RI VF
Sbjct: 708 DILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVF 750
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 127/245 (51%), Gaps = 12/245 (4%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L + G E G + P G+ V ++V+D N+RVQV P LK
Sbjct: 519 LSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNG 578
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GI V DN I+V D NHRVQ+F + G F+ KFGS G + GQ ++P +AV++
Sbjct: 579 EFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSR 638
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+++V+DS NHR+Q FD GR + F + G G + P + + T +IVS
Sbjct: 639 RQIVVTDSRNHRIQQFDSEGRFIRQI-----VFDNHGQTKG-IASPRGVCYTPTGNIIVS 692
Query: 216 DSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
D +NH + + D + +++ G EGS + P G+ DD+G I V DS N RI +F
Sbjct: 693 DFDNHCLYLIDPDINDILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVFNQ 752
Query: 275 DGQFL 279
+ F+
Sbjct: 753 NLDFM 757
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
F + G++ GQ+ P + V V+VSD N+RVQ VF DG+ KFG G
Sbjct: 523 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQ-------VFNPDGSLKFKFGRKGV 575
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
G+ + P I V NR+IV D +NHRVQIF +G + FGS G E GQ ++P VAV
Sbjct: 576 GNGEFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAV 635
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL---EGVAVMSNGNILVCD 310
+ + I V DS N+RIQ F +G+F+R G+ KG+ GV GNI+V D
Sbjct: 636 NSRRQIVVTDSRNHRIQQFDSEGRFIRQI--VFDNHGQTKGIASPRGVCYTPTGNIIVSD 693
Query: 311 RENH 314
+NH
Sbjct: 694 FDNH 697
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 74/132 (56%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
F + G++ GQ+ P + V V+VSD N+RVQ+F+ +G + FG +G G+
Sbjct: 523 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDL 582
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+ VD I V D N+R+QIFT G FL FG +G G+F+ VAV S I+
Sbjct: 583 PAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIV 642
Query: 308 VCDRENHRIQVF 319
V D NHRIQ F
Sbjct: 643 VTDSRNHRIQQF 654
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
SF +EG E+GQ+ P G+ VD G++ V D NNR+Q+F PDG FG G G+GEF
Sbjct: 522 SFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFD 581
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ V + I+V D++NHR+Q+F
Sbjct: 582 LPAGICVDVDNRIIVVDKDNHRVQIF 607
>gi|194863806|ref|XP_001970623.1| GG10744 [Drosophila erecta]
gi|190662490|gb|EDV59682.1| GG10744 [Drosophila erecta]
Length = 832
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 120/223 (53%), Gaps = 11/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ V ++V+D N+RVQVF DG+ KFG G G+ + P I V NR+I
Sbjct: 553 PWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDLPAGICVDVDNRII 612
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D +NHRVQIF + G F+ KFGS G + GQ ++P +AV++ +++V+DS N
Sbjct: 613 VVDKDNHRVQIF-------TASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIVVTDSRN 665
Query: 220 HRVQIFDVNGRVITS--FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD-G 276
HR+Q FD GR I F + G +G + PRGV G I V D N+ + + PD
Sbjct: 666 HRIQQFDSEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNIIVSDFDNHCLYLIDPDIN 724
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L G GSG EF G+ G I+V D +N RI VF
Sbjct: 725 DILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVF 767
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 127/245 (51%), Gaps = 12/245 (4%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L + G E G + P G+ V ++V+D N+RVQV P LK
Sbjct: 536 LSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNG 595
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GI V DN I+V D NHRVQ+F + G F+ KFGS G + GQ ++P +AV++
Sbjct: 596 EFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSR 655
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+++V+DS NHR+Q FD GR + F + G G + P + + T +IVS
Sbjct: 656 RQIVVTDSRNHRIQQFDSEGRFIRQI-----VFDNHGQTKG-IASPRGVCYTPTGNIIVS 709
Query: 216 DSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
D +NH + + D + +++ G EGS + P G+ DD+G I V DS N RI +F
Sbjct: 710 DFDNHCLYLIDPDINDILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVFNQ 769
Query: 275 DGQFL 279
+ F+
Sbjct: 770 NLDFM 774
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
F + G++ GQ+ P + V V+VSD N+RVQ VF DG+ KFG G
Sbjct: 540 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQ-------VFNPDGSLKFKFGRKGV 592
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
G+ + P I V NR+IV D +NHRVQIF +G + FGS G E GQ ++P VAV
Sbjct: 593 GNGEFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAV 652
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL---EGVAVMSNGNILVCD 310
+ + I V DS N+RIQ F +G+F+R G+ KG+ GV GNI+V D
Sbjct: 653 NSRRQIVVTDSRNHRIQQFDSEGRFIRQI--VFDNHGQTKGIASPRGVCYTPTGNIIVSD 710
Query: 311 RENH 314
+NH
Sbjct: 711 FDNH 714
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 74/132 (56%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
F + G++ GQ+ P + V V+VSD N+RVQ+F+ +G + FG +G G+
Sbjct: 540 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDL 599
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+ VD I V D N+R+QIFT G FL FG +G G+F+ VAV S I+
Sbjct: 600 PAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIV 659
Query: 308 VCDRENHRIQVF 319
V D NHRIQ F
Sbjct: 660 VTDSRNHRIQQF 671
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
SF +EG E+GQ+ P G+ VD G++ V D NNR+Q+F PDG FG G G+GEF
Sbjct: 539 SFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFD 598
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ V + I+V D++NHR+Q+F
Sbjct: 599 LPAGICVDVDNRIIVVDKDNHRVQIF 624
>gi|20092638|ref|NP_618713.1| cell surface protein [Methanosarcina acetivorans C2A]
gi|19917919|gb|AAM07193.1| cell surface protein [Methanosarcina acetivorans C2A]
Length = 526
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 141/279 (50%), Gaps = 20/279 (7%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--------- 95
IGS G+ F+ P+ +I VAD+ N+R+++ FD N +
Sbjct: 40 IGSSGTGSNQFSSPKYATTDSSGNIYVADTGNNRIEI----FDKNFNYIDKWGSGGSGNG 95
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P G+AV +I VAD +NHRVQ S G ++ + S G +P +AV +
Sbjct: 96 QFYTPNGVAVDSMGNIYVADYNNHRVQKLDSTGVYISQCDSSTIGDGLSFYPVDLAVDSL 155
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+ V VSDS ++R+ + DG ++ ++GS G Q P IAV ++ + V
Sbjct: 156 DNVYVSDSRSNRIVKLN-------KDGNYLTQWGSKGASRNQFNDPEGIAVDSSGNIYVV 208
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
DS N R+ FD G +T +G+ G E+GQ + P G+A+D G I V D+GN RIQ F
Sbjct: 209 DSGNSRIMKFDGTGTYLTEWGTPGQEDGQFRSPHGIAIDSSGAIYVTDTGNRRIQKFDST 268
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
G ++ + +GDG+F+ G+ V S+ N+ V D H
Sbjct: 269 GSYVTKWVSPENGDGKFQNPVGIVVDSSNNVYVVDSFYH 307
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 119/227 (52%), Gaps = 14/227 (6%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ------VCFPHFDLKTNCVFLAF 97
K GS GS G F P G+AV +I VAD +NHRVQ V D T L+F
Sbjct: 86 KWGSGGSGNGQFYTPNGVAVDSMGNIYVADYNNHRVQKLDSTGVYISQCDSSTIGDGLSF 145
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
+P +AV +++ V+DS ++R+ DG ++ ++GS G Q P IAV ++
Sbjct: 146 -YPVDLAVDSLDNVYVSDSRSNRIVKLNKDGNYLTQWGSKGASRNQFNDPEGIAVDSSGN 204
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
+ V DS N R+ FD GT++ ++G+ G + GQ PH IA+ ++ + V+D+
Sbjct: 205 IYVVDSGNSRIMKFD-------GTGTYLTEWGTPGQEDGQFRSPHGIAIDSSGAIYVTDT 257
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDS 264
N R+Q FD G +T + S + +G+ + P G+ VD + V DS
Sbjct: 258 GNRRIQKFDSTGSYVTKWVSPENGDGKFQNPVGIVVDSSNNVYVVDS 304
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 106/237 (44%), Gaps = 54/237 (22%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
FV GS G + Q P Y ++ + V+D+ N+R++IFD N ++ K+G
Sbjct: 36 FVKVIGSSGTGSNQFSSPKYATTDSSGNIYVADTGNNRIEIFDKNFN-------YIDKWG 88
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV---------------------- 227
S G+ GQ P+ +AV + + V+D NNHRVQ D
Sbjct: 89 SGGSGNGQFYTPNGVAVDSMGNIYVADYNNHRVQKLDSTGVYISQCDSSTIGDGLSFYPV 148
Query: 228 -------------------------NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
+G +T +GS+G+ Q P G+AVD G I V
Sbjct: 149 DLAVDSLDNVYVSDSRSNRIVKLNKDGNYLTQWGSKGASRNQFNDPEGIAVDSSGNIYVV 208
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
DSGN+RI F G +L +G G DG+F+ G+A+ S+G I V D N RIQ F
Sbjct: 209 DSGNSRIMKFDGTGTYLTEWGTPGQEDGQFRSPHGIAIDSSGAIYVTDTGNRRIQKF 265
>gi|194757600|ref|XP_001961052.1| GF13678 [Drosophila ananassae]
gi|190622350|gb|EDV37874.1| GF13678 [Drosophila ananassae]
Length = 832
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 120/223 (53%), Gaps = 11/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ V ++V+D N+RVQVF DG+ KFG G G+ + P I V NR+I
Sbjct: 553 PWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDLPAGICVDVDNRII 612
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D +NHRVQIF + G F+ KFGS G + GQ ++P +AV++ +++V+DS N
Sbjct: 613 VVDKDNHRVQIF-------TASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIVVTDSRN 665
Query: 220 HRVQIFDVNGRVITS--FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD-G 276
HR+Q FD GR I F + G +G + PRGV G I V D N+ + + PD
Sbjct: 666 HRIQQFDSEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNIIVSDFDNHCLYLIDPDIN 724
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L G GSG EF G+ G I+V D +N RI VF
Sbjct: 725 DILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVF 767
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 130/247 (52%), Gaps = 16/247 (6%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L + G E G + P G+ V ++V+D N+RVQV P LK
Sbjct: 536 LSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNG 595
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GI V DN I+V D NHRVQ+F + G F+ KFGS G + GQ ++P +AV++
Sbjct: 596 EFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSR 655
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK--FGSMGNKAGQLEHPHYIAVSNTNRVI 213
+++V+DS NHR+Q FD S+G F+ + F + G G + P + + T +I
Sbjct: 656 RQIVVTDSRNHRIQQFD-------SEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNII 707
Query: 214 VSDSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
VSD +NH + + D + +++ G EGS + P G+ DD+G I V DS N RI +F
Sbjct: 708 VSDFDNHCLYLIDPDINDILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVF 767
Query: 273 TPDGQFL 279
+ F+
Sbjct: 768 NQNLDFM 774
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
F + G++ GQ+ P + V V+VSD N+RVQ VF DG+ KFG G
Sbjct: 540 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQ-------VFNPDGSLKFKFGRKGV 592
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
G+ + P I V NR+IV D +NHRVQIF +G + FGS G E GQ ++P VAV
Sbjct: 593 GNGEFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAV 652
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL---EGVAVMSNGNILVCD 310
+ + I V DS N+RIQ F +G+F+R G+ KG+ GV GNI+V D
Sbjct: 653 NSRRQIVVTDSRNHRIQQFDSEGRFIRQI--VFDNHGQTKGIASPRGVCYTPTGNIIVSD 710
Query: 311 RENH 314
+NH
Sbjct: 711 FDNH 714
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 74/132 (56%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
F + G++ GQ+ P + V V+VSD N+RVQ+F+ +G + FG +G G+
Sbjct: 540 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDL 599
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+ VD I V D N+R+QIFT G FL FG +G G+F+ VAV S I+
Sbjct: 600 PAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIV 659
Query: 308 VCDRENHRIQVF 319
V D NHRIQ F
Sbjct: 660 VTDSRNHRIQQF 671
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
SF +EG E+GQ+ P G+ VD G++ V D NNR+Q+F PDG FG G G+GEF
Sbjct: 539 SFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFD 598
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ V + I+V D++NHR+Q+F
Sbjct: 599 LPAGICVDVDNRIIVVDKDNHRVQIF 624
>gi|195474392|ref|XP_002089475.1| GE23959 [Drosophila yakuba]
gi|194175576|gb|EDW89187.1| GE23959 [Drosophila yakuba]
Length = 819
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 120/223 (53%), Gaps = 11/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ V ++V+D N+RVQVF DG+ KFG G G+ + P I V NR+I
Sbjct: 540 PWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDLPAGICVDVDNRII 599
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D +NHRVQIF + G F+ KFGS G + GQ ++P +AV++ +++V+DS N
Sbjct: 600 VVDKDNHRVQIF-------TASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIVVTDSRN 652
Query: 220 HRVQIFDVNGRVITS--FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD-G 276
HR+Q FD GR I F + G +G + PRGV G I V D N+ + + PD
Sbjct: 653 HRIQQFDSEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNIIVSDFDNHCLYLIDPDIN 711
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L G GSG EF G+ G I+V D +N RI VF
Sbjct: 712 DILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVF 754
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 127/245 (51%), Gaps = 12/245 (4%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L + G E G + P G+ V ++V+D N+RVQV P LK
Sbjct: 523 LSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNG 582
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GI V DN I+V D NHRVQ+F + G F+ KFGS G + GQ ++P +AV++
Sbjct: 583 EFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSR 642
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+++V+DS NHR+Q FD GR + F + G G + P + + T +IVS
Sbjct: 643 RQIVVTDSRNHRIQQFDSEGRFIRQI-----VFDNHGQTKG-IASPRGVCYTPTGNIIVS 696
Query: 216 DSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
D +NH + + D + +++ G EGS + P G+ DD+G I V DS N RI +F
Sbjct: 697 DFDNHCLYLIDPDINDILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVFNQ 756
Query: 275 DGQFL 279
+ F+
Sbjct: 757 NLDFM 761
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
F + G++ GQ+ P + V V+VSD N+RVQ VF DG+ KFG G
Sbjct: 527 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQ-------VFNPDGSLKFKFGRKGV 579
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
G+ + P I V NR+IV D +NHRVQIF +G + FGS G E GQ ++P VAV
Sbjct: 580 GNGEFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAV 639
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL---EGVAVMSNGNILVCD 310
+ + I V DS N+RIQ F +G+F+R G+ KG+ GV GNI+V D
Sbjct: 640 NSRRQIVVTDSRNHRIQQFDSEGRFIRQI--VFDNHGQTKGIASPRGVCYTPTGNIIVSD 697
Query: 311 RENH 314
+NH
Sbjct: 698 FDNH 701
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 74/132 (56%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
F + G++ GQ+ P + V V+VSD N+RVQ+F+ +G + FG +G G+
Sbjct: 527 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDL 586
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+ VD I V D N+R+QIFT G FL FG +G G+F+ VAV S I+
Sbjct: 587 PAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIV 646
Query: 308 VCDRENHRIQVF 319
V D NHRIQ F
Sbjct: 647 VTDSRNHRIQQF 658
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
SF +EG E+GQ+ P G+ VD G++ V D NNR+Q+F PDG FG G G+GEF
Sbjct: 526 SFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFD 585
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ V + I+V D++NHR+Q+F
Sbjct: 586 LPAGICVDVDNRIIVVDKDNHRVQIF 611
>gi|195026645|ref|XP_001986303.1| GH20597 [Drosophila grimshawi]
gi|193902303|gb|EDW01170.1| GH20597 [Drosophila grimshawi]
Length = 834
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 120/223 (53%), Gaps = 11/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ V ++V+D N+RVQVF DG+ KFG G G+ + P I V NR+I
Sbjct: 555 PWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDLPAGICVDVDNRII 614
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D +NHRVQIF + G F+ KFGS G + GQ ++P +AV++ +++V+DS N
Sbjct: 615 VVDKDNHRVQIF-------TASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIVVTDSRN 667
Query: 220 HRVQIFDVNGRVITS--FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD-G 276
HR+Q FD GR I F + G +G + PRGV G I V D N+ + + PD
Sbjct: 668 HRIQQFDSEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNIIVSDFDNHCLYLIDPDIN 726
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L G GSG EF G+ G I+V D +N RI VF
Sbjct: 727 DILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVF 769
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 127/245 (51%), Gaps = 12/245 (4%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L + G E G + P G+ V ++V+D N+RVQV P LK
Sbjct: 538 LSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNG 597
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GI V DN I+V D NHRVQ+F + G F+ KFGS G + GQ ++P +AV++
Sbjct: 598 EFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSR 657
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+++V+DS NHR+Q FD GR + F + G G + P + + T +IVS
Sbjct: 658 RQIVVTDSRNHRIQQFDSEGRFIRQI-----VFDNHGQTKG-IASPRGVCYTPTGNIIVS 711
Query: 216 DSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
D +NH + + D + +++ G EGS + P G+ DD+G I V DS N RI +F
Sbjct: 712 DFDNHCLYLIDPDINDILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVFNQ 771
Query: 275 DGQFL 279
+ F+
Sbjct: 772 NLDFM 776
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
F + G++ GQ+ P + V V+VSD N+RVQ VF DG+ KFG G
Sbjct: 542 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQ-------VFNPDGSLKFKFGRKGV 594
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
G+ + P I V NR+IV D +NHRVQIF +G + FGS G E GQ ++P VAV
Sbjct: 595 GNGEFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAV 654
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL---EGVAVMSNGNILVCD 310
+ + I V DS N+RIQ F +G+F+R G+ KG+ GV GNI+V D
Sbjct: 655 NSRRQIVVTDSRNHRIQQFDSEGRFIRQI--VFDNHGQTKGIASPRGVCYTPTGNIIVSD 712
Query: 311 RENH 314
+NH
Sbjct: 713 FDNH 716
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 74/132 (56%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
F + G++ GQ+ P + V V+VSD N+RVQ+F+ +G + FG +G G+
Sbjct: 542 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDL 601
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+ VD I V D N+R+QIFT G FL FG +G G+F+ VAV S I+
Sbjct: 602 PAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIV 661
Query: 308 VCDRENHRIQVF 319
V D NHRIQ F
Sbjct: 662 VTDSRNHRIQQF 673
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
SF +EG E+GQ+ P G+ VD G++ V D NNR+Q+F PDG FG G G+GEF
Sbjct: 541 SFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFD 600
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ V + I+V D++NHR+Q+F
Sbjct: 601 LPAGICVDVDNRIIVVDKDNHRVQIF 626
>gi|195425389|ref|XP_002060992.1| GK10704 [Drosophila willistoni]
gi|194157077|gb|EDW71978.1| GK10704 [Drosophila willistoni]
Length = 838
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 120/223 (53%), Gaps = 11/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ V ++V+D N+RVQVF DG+ KFG G G+ + P I V NR+I
Sbjct: 559 PWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDLPAGICVDVDNRII 618
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D +NHRVQIF + G F+ KFGS G + GQ ++P +AV++ +++V+DS N
Sbjct: 619 VVDKDNHRVQIF-------TASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIVVTDSRN 671
Query: 220 HRVQIFDVNGRVITS--FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD-G 276
HR+Q FD GR I F + G +G + PRGV G I V D N+ + + PD
Sbjct: 672 HRIQQFDSEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNIIVSDFDNHCLYLIDPDIN 730
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L G GSG EF G+ G I+V D +N RI VF
Sbjct: 731 DILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVF 773
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 130/247 (52%), Gaps = 16/247 (6%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L + G E G + P G+ V ++V+D N+RVQV P LK
Sbjct: 542 LSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNG 601
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GI V DN I+V D NHRVQ+F + G F+ KFGS G + GQ ++P +AV++
Sbjct: 602 EFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSR 661
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK--FGSMGNKAGQLEHPHYIAVSNTNRVI 213
+++V+DS NHR+Q FD S+G F+ + F + G G + P + + T +I
Sbjct: 662 RQIVVTDSRNHRIQQFD-------SEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNII 713
Query: 214 VSDSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
VSD +NH + + D + +++ G EGS + P G+ DD+G I V DS N RI +F
Sbjct: 714 VSDFDNHCLYLIDPDINDILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVF 773
Query: 273 TPDGQFL 279
+ F+
Sbjct: 774 NQNLDFM 780
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
F + G++ GQ+ P + V V+VSD N+RVQ VF DG+ KFG G
Sbjct: 546 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQ-------VFNPDGSLKFKFGRKGV 598
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
G+ + P I V NR+IV D +NHRVQIF +G + FGS G E GQ ++P VAV
Sbjct: 599 GNGEFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAV 658
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL---EGVAVMSNGNILVCD 310
+ + I V DS N+RIQ F +G+F+R G+ KG+ GV GNI+V D
Sbjct: 659 NSRRQIVVTDSRNHRIQQFDSEGRFIRQI--VFDNHGQTKGIASPRGVCYTPTGNIIVSD 716
Query: 311 RENH 314
+NH
Sbjct: 717 FDNH 720
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 74/132 (56%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
F + G++ GQ+ P + V V+VSD N+RVQ+F+ +G + FG +G G+
Sbjct: 546 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDL 605
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+ VD I V D N+R+QIFT G FL FG +G G+F+ VAV S I+
Sbjct: 606 PAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIV 665
Query: 308 VCDRENHRIQVF 319
V D NHRIQ F
Sbjct: 666 VTDSRNHRIQQF 677
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
SF +EG E+GQ+ P G+ VD G++ V D NNR+Q+F PDG FG G G+GEF
Sbjct: 545 SFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFD 604
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ V + I+V D++NHR+Q+F
Sbjct: 605 LPAGICVDVDNRIIVVDKDNHRVQIF 630
>gi|340380232|ref|XP_003388627.1| PREDICTED: tripartite motif-containing protein 71-like [Amphimedon
queenslandica]
Length = 474
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 146/298 (48%), Gaps = 45/298 (15%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQ-VCFPHFDLKTNCVF----LAFTWPRGIAVGP-DNSI 111
PRG+A+ PD I+V+D +HR+Q +C + K + F +P GIA+ P +
Sbjct: 180 PRGVAITPDKFILVSD--DHRIQKICMDGYLNKPLGKYGSDRQEFKYPHGIAISPITGKV 237
Query: 112 VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN----------------- 154
+AD +NHR+QV+ + TF FGS G+ GQ + P IA+
Sbjct: 238 YIADCNNHRIQVWNPNLTFSHSFGSYGSANGQFQRPADIAIDKFVGQFGTKGSDDRELET 297
Query: 155 ----------TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYI 204
T V VS+S NHR+ VF SDG FVGKFGS G+ GQ P +
Sbjct: 298 PEGIAIDTAATGLVYVSESGNHRIS-------VFTSDGEFVGKFGSKGSDDGQFHCPRGL 350
Query: 205 AVSNTNRVIVSDSNNHRVQI-FDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ--GYISV 261
A N + + ++ F + + + FG+ GS GQL + G+A+ G + V
Sbjct: 351 AFDNDGFLYWPITKFVKISTRFMLAVKFVGQFGTVGSRPGQLSYLSGIAIGTAATGLVYV 410
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ GN+RI +FT DG F+ FG GS +F G+A +G + VCD +N R+ V+
Sbjct: 411 SEEGNHRISVFTSDGVFVGKFGSKGSNIDQFYCPRGLAFDKDGLLYVCDCDNCRLFVY 468
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 132/289 (45%), Gaps = 46/289 (15%)
Query: 19 LLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGP-DNSIVVADSSNH 77
+LVS ++ YL K +G GS+ F +P GIA+ P + +AD +NH
Sbjct: 191 ILVSDDHRIQKICMDGYLNK-----PLGKYGSDRQEFKYPHGIAISPITGKVYIADCNNH 245
Query: 78 RVQVCFP----------------HFDLKTNCVFLAFT--------------WPRGIAVGP 107
R+QV P F + F P GIA+
Sbjct: 246 RIQVWNPNLTFSHSFGSYGSANGQFQRPADIAIDKFVGQFGTKGSDDRELETPEGIAIDT 305
Query: 108 DNS--IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
+ + V++S NHR+ VF SDG FVGKFGS G+ GQ P +A N + +
Sbjct: 306 AATGLVYVSESGNHRISVFTSDGEFVGKFGSKGSDDGQFHCPRGLAFDNDGFLYWPITKF 365
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV--SNTNRVIVSDSNNHRVQ 223
++ F FVG+FG++G++ GQL + IA+ + T V VS+ NHR+
Sbjct: 366 VKIST------RFMLAVKFVGQFGTVGSRPGQLSYLSGIAIGTAATGLVYVSEEGNHRIS 419
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+F +G + FGS+GS Q PRG+A D G + V D N R+ ++
Sbjct: 420 VFTSDGVFVGKFGSKGSNIDQFYCPRGLAFDKDGLLYVCDCDNCRLFVY 468
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 153/367 (41%), Gaps = 102/367 (27%)
Query: 24 IGQVGTTPRS---QYLQKRRLQFKI----GSRGSEPGCFTWPRGIAVGPDNSIVVADSSN 76
+G+ G+ P ++ R L+FK GS GS G F P IA+ + VAD N
Sbjct: 6 VGEKGSEPLQFNYPHVVNRDLKFKFSRSFGSEGSANGQFERPTDIAIDSQGLVYVADCWN 65
Query: 77 HRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS 136
R+Q F+ P G VG + VF SDG FVG FGS
Sbjct: 66 GRIQ---------------KFS-PDGEFVGQFGTKGFGPGQLSYPFVFTSDGVFVGNFGS 109
Query: 137 MGNKAGQLEHPHYIA------------VSNTNRVIVSDSNNHRVQIFDVNGRVFQS---- 180
G+ Q +P +A V + N VIV++ + V I D G+ +S
Sbjct: 110 KGSNIDQFNNPRELAFDKDGFLYVCDSVRDDNHVIVTEHFDDCVAILDRKGKKVKSLGRK 169
Query: 181 -----------------------------------DGTFVGKFGSMGNKAGQLEHPHYIA 205
DG G G+ + ++PH IA
Sbjct: 170 RGGGDFNLFNPRGVAITPDKFILVSDDHRIQKICMDGYLNKPLGKYGSDRQEFKYPHGIA 229
Query: 206 VSN-TNRVIVSDSNNHRVQIFDVN-------------------------GRVITSFGSEG 239
+S T +V ++D NNHR+Q+++ N + + FG++G
Sbjct: 230 ISPITGKVYIADCNNHRIQVWNPNLTFSHSFGSYGSANGQFQRPADIAIDKFVGQFGTKG 289
Query: 240 SEEGQLKFPRGVAVDD--QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
S++ +L+ P G+A+D G + V +SGN+RI +FT DG+F+ FG GS DG+F G
Sbjct: 290 SDDRELETPEGIAIDTAATGLVYVSESGNHRISVFTSDGEFVGKFGSKGSDDGQFHCPRG 349
Query: 298 VAVMSNG 304
+A ++G
Sbjct: 350 LAFDNDG 356
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIV------VADSSNHRVQVCFPHFDLKTNCVFLAF 97
K GS+GS+ G F PRG+A D + V S+ + V F
Sbjct: 333 KFGSKGSDDGQFHCPRGLAFDNDGFLYWPITKFVKISTRFMLAVKFVGQFGTVGSRPGQL 392
Query: 98 TWPRGIAVGPDNS--IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
++ GIA+G + + V++ NHR+ VF SDG FVGKFGS G+ Q P +A
Sbjct: 393 SYLSGIAIGTAATGLVYVSEEGNHRISVFTSDGVFVGKFGSKGSNIDQFYCPRGLAFDKD 452
Query: 156 NRVIVSDSNNHRVQIFDV 173
+ V D +N R+ +++V
Sbjct: 453 GLLYVCDCDNCRLFVYNV 470
>gi|392412797|ref|YP_006449404.1| NHL repeat protein [Desulfomonile tiedjei DSM 6799]
gi|390625933|gb|AFM27140.1| NHL repeat protein [Desulfomonile tiedjei DSM 6799]
Length = 303
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 147/279 (52%), Gaps = 20/279 (7%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRV--------QVCFPHFDLKTNCVFLAFTWP 100
GS+ P +A PD +++V+D +++RV QV D ++ FL F P
Sbjct: 34 GSKSPDLMGPFDLAQMPDGNLLVSDPAHYRVIGLDRDLKQVA-SFGDPGSHAGFLNF--P 90
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
+G+++ S+ VADS+N RVQVF S G GS+G+ G P + V+ R+ V
Sbjct: 91 KGLSIDSAGSVYVADSNNCRVQVFDSTGKLKSVIGSIGSIGGSFATPQGVFVAPDGRLFV 150
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+D+ NHRVQIF +G G +G+ Q P + V++ +++ DS +
Sbjct: 151 ADTRNHRVQIF--------RNGEVEAIIGELGDANDQFRLPTAVGVNSQGEILILDSKHG 202
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
V+IFD N + + S G +G+ G L+ P+G+ +D I V D+GN+RIQ F DG
Sbjct: 203 MVKIFDKNLQFVKSIGKDGTAPGSLRMPQGMKIDASDDIWVADTGNHRIQKFGTDGTVRA 262
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G GSG EFK G+AV ++ + V D N RIQVF
Sbjct: 263 LYGKQGSGPDEFKSPTGLAVTTD-KLFVADNGNSRIQVF 300
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 14/233 (6%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT-----NCVFLAFTWP 100
G GS G +P+G+++ S+ VADS+N RVQV LK+ + +F P
Sbjct: 78 GDPGSHAGFLNFPKGLSIDSAGSVYVADSNNCRVQVFDSTGKLKSVIGSIGSIGGSFATP 137
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
+G+ V PD + VAD+ NHRVQ+F+ +G G +G+ Q P + V++ +++
Sbjct: 138 QGVFVAPDGRLFVADTRNHRVQIFR-NGEVEAIIGELGDANDQFRLPTAVGVNSQGEILI 196
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
DS + V+IFD N + FV G G G L P + + ++ + V+D+ NH
Sbjct: 197 LDSKHGMVKIFDKNLQ-------FVKSIGKDGTAPGSLRMPQGMKIDASDDIWVADTGNH 249
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
R+Q F +G V +G +GS + K P G+AV + V D+GN+RIQ+F
Sbjct: 250 RIQKFGTDGTVRALYGKQGSGPDEFKSPTGLAVTTD-KLFVADNGNSRIQVFA 301
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 14/179 (7%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWPRGIAVGPDN 109
F P+G+ V PD + VAD+ NHRVQ+ F + +++ L F P + V
Sbjct: 134 FATPQGVFVAPDGRLFVADTRNHRVQI-FRNGEVEAIIGELGDANDQFRLPTAVGVNSQG 192
Query: 110 SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 169
I++ DS + V++F + FV G G G L P + + ++ + V+D+ NHR+Q
Sbjct: 193 EILILDSKHGMVKIFDKNLQFVKSIGKDGTAPGSLRMPQGMKIDASDDIWVADTGNHRIQ 252
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
F +DGT +G G+ + + P +AV+ T+++ V+D+ N R+Q+F N
Sbjct: 253 -------KFGTDGTVRALYGKQGSGPDEFKSPTGLAVT-TDKLFVADNGNSRIQVFAKN 303
>gi|74199723|dbj|BAE41519.1| unnamed protein product [Mus musculus]
Length = 717
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 127/254 (50%), Gaps = 25/254 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+
Sbjct: 636 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV 695
Query: 272 FTPDGQFLRAFGCW 285
+ + R + W
Sbjct: 696 WRMESPRSRCWCFW 709
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 123/223 (55%), Gaps = 12/223 (5%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT +G++ IVVADS+N +QVF ++G F +FG G GQL+ P +AV
Sbjct: 486 FTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTNG 545
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+IV+D +N V IF +G F K G AG+L P +AV +IV D
Sbjct: 546 DIIVADYDNRWVSIFS-------PEGKFKTKIG-----AGRLMGPKGVAVDRNGHIIVVD 593
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ + V F NG+++ FG G+ + P VAV+++ I V D N+ +++++ DG
Sbjct: 594 NKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADG 653
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+FL FG G G+G+F GVAV SNGNI+V D N RIQV+
Sbjct: 654 EFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVW 696
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 100/189 (52%), Gaps = 7/189 (3%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVN 228
R+Q++ +
Sbjct: 691 SRIQVWRME 699
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
>gi|195551274|ref|XP_002076196.1| GD15308 [Drosophila simulans]
gi|194201845|gb|EDX15421.1| GD15308 [Drosophila simulans]
Length = 392
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 120/223 (53%), Gaps = 11/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ V ++V+D N+RVQVF DG+ KFG G G+ + P I V NR+I
Sbjct: 113 PWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDLPAGICVDVDNRII 172
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D +NHRVQIF + G F+ KFGS G + GQ ++P +AV++ +++V+DS N
Sbjct: 173 VVDKDNHRVQIF-------TASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIVVTDSRN 225
Query: 220 HRVQIFDVNGRVITS--FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD-G 276
HR+Q FD GR I F + G +G + PRGV G I V D N+ + + PD
Sbjct: 226 HRIQQFDSEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNIIVSDFDNHCLYLIDPDIN 284
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L G GSG EF G+ G I+V D +N RI VF
Sbjct: 285 DILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVF 327
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 127/245 (51%), Gaps = 12/245 (4%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L + G E G + P G+ V ++V+D N+RVQV P LK
Sbjct: 96 LSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNG 155
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GI V DN I+V D NHRVQ+F + G F+ KFGS G + GQ ++P +AV++
Sbjct: 156 EFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSR 215
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+++V+DS NHR+Q FD GR + F + G G + P + + T +IVS
Sbjct: 216 RQIVVTDSRNHRIQQFDSEGRFIRQI-----VFDNHGQTKG-IASPRGVCYTPTGNIIVS 269
Query: 216 DSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
D +NH + + D + +++ G EGS + P G+ DD+G I V DS N RI +F
Sbjct: 270 DFDNHCLYLIDPDINDILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVFNQ 329
Query: 275 DGQFL 279
+ F+
Sbjct: 330 NLDFM 334
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
F + G++ GQ+ P + V V+VSD N+RVQ VF DG+ KFG G
Sbjct: 100 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQ-------VFNPDGSLKFKFGRKGV 152
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
G+ + P I V NR+IV D +NHRVQIF +G + FGS G E GQ ++P VAV
Sbjct: 153 GNGEFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAV 212
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL---EGVAVMSNGNILVCD 310
+ + I V DS N+RIQ F +G+F+R G+ KG+ GV GNI+V D
Sbjct: 213 NSRRQIVVTDSRNHRIQQFDSEGRFIRQIVF--DNHGQTKGIASPRGVCYTPTGNIIVSD 270
Query: 311 RENH 314
+NH
Sbjct: 271 FDNH 274
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 74/132 (56%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
F + G++ GQ+ P + V V+VSD N+RVQ+F+ +G + FG +G G+
Sbjct: 100 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDL 159
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+ VD I V D N+R+QIFT G FL FG +G G+F+ VAV S I+
Sbjct: 160 PAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIV 219
Query: 308 VCDRENHRIQVF 319
V D NHRIQ F
Sbjct: 220 VTDSRNHRIQQF 231
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
SF +EG E+GQ+ P G+ VD G++ V D NNR+Q+F PDG FG G G+GEF
Sbjct: 99 SFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFD 158
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ V + I+V D++NHR+Q+F
Sbjct: 159 LPAGICVDVDNRIIVVDKDNHRVQIF 184
>gi|229090946|ref|ZP_04222170.1| Cell surface protein [Bacillus cereus Rock3-42]
gi|228692347|gb|EEL46082.1| Cell surface protein [Bacillus cereus Rock3-42]
Length = 602
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 158/346 (45%), Gaps = 62/346 (17%)
Query: 30 TPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC------- 82
+P QYLQ IGS G G P+GIA+ + + +AD+ N+R+QV
Sbjct: 153 SPNGQYLQT------IGSYGKANGEMALPQGIAINKQDEVYIADTYNNRIQVFDKKGEFK 206
Query: 83 --------------FPH-----FDLKTNCVFLA-------------------------FT 98
F H FD + +++A F
Sbjct: 207 RVIGTGIAGIGPYQFYHPRGINFDSTSGSLYVADTYNNRIMKFTNKDQFLYTVGNFPQFV 266
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG---QLEHPHYIAVSNT 155
+P + +I + D+ N+RV ++ G ++GN+ Q P+ +
Sbjct: 267 YPNQVLPDGKGNIYITDTGNNRVLLYNEVGLTAVMKKNIGNERNGNTQYAGPYDVERDTN 326
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG--NKAGQLEHPHYIAVSNTNRVI 213
+ VSDS NHR+ +D++G++ G+ G G +G + GQ P IA N V
Sbjct: 327 GNIFVSDSFNHRILKYDMSGKIVGKWGSLFGIGGPLGFGSLPGQFFVPRQIATDRYNNVY 386
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
VSDS NHR+Q F +G + S+GS G G +FP G+A+D +G I + DS N+RIQ F
Sbjct: 387 VSDSVNHRIQKFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKGNIFIADSENHRIQKFN 446
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+++ +G GSG+ EF +A+ S N+ V DR N+RIQ F
Sbjct: 447 QFFVYMKEWGKKGSGEAEFFQPMQLAIDSKDNVYVVDRINNRIQKF 492
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 143/281 (50%), Gaps = 18/281 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTW 99
IG+ G PG F P GIAV + +I+VAD++N+R+Q F + F++
Sbjct: 68 IGTLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSF 127
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PR IAV DN+ + D NHR+Q + +G ++ GS G G++ P IA++ + V
Sbjct: 128 PREIAVDSDNNYYITDEYNHRIQKYSPNGQYLQTIGSYGKANGEMALPQGIAINKQDEVY 187
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSN 218
++D+ N+R+Q+FD G + GT + G Q HP I +T+ + V+D+
Sbjct: 188 IADTYNNRIQVFDKKGEFKRVIGTGIAGIGPY-----QFYHPRGINFDSTSGSLYVADTY 242
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ- 277
N+R+ F + + + G+ Q +P V D +G I + D+GNNR+ ++ G
Sbjct: 243 NNRIMKFTNKDQFLYTVGN----FPQFVYPNQVLPDGKGNIYITDTGNNRVLLYNEVGLT 298
Query: 278 --FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+ G +G+ ++ G V +NGNI V D NHRI
Sbjct: 299 AVMKKNIGNERNGNTQYAGPYDVERDTNGNIFVSDSFNHRI 339
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 139/295 (47%), Gaps = 41/295 (13%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------------------A 96
+ P + + +I V+DS NHR+ +D+ V
Sbjct: 315 YAGPYDVERDTNGNIFVSDSFNHRIL----KYDMSGKIVGKWGSLFGIGGPLGFGSLPGQ 370
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F PR IA N++ V+DS NHR+Q F + G + +GS G G + P IA+ +
Sbjct: 371 FFVPRQIATDRYNNVYVSDSVNHRIQKFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKG 430
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ ++DS NHR+Q F+ + F ++ ++G G+ + P +A+ + + V V D
Sbjct: 431 NIFIADSENHRIQKFN---QFF----VYMKEWGKKGSGEAEFFQPMQLAIDSKDNVYVVD 483
Query: 217 SNNHRVQIFDVNGRVITSFGS----------EGSEEG--QLKFPRGVAVDDQGYISVGDS 264
N+R+Q FD G IT +G+ E EG L P G+ +D + V D+
Sbjct: 484 RINNRIQKFDNEGNFITKWGTNHGAGNLDPLENWREGPGDLFLPIGIEIDINNKVYVTDT 543
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NNR+ I+ +G FL +FG + G+F +G+ V S GNI++ D RIQ F
Sbjct: 544 SNNRVNIYNENGDFLESFGSFNGMSGQFFSPQGIDVDSQGNIIITDGLLQRIQFF 598
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P GIAV + +I+VAD++N+R+Q F + F+ +G+ G + Q P IAV + N
Sbjct: 78 FNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSFPREIAVDSDN 137
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++D NHR+Q + NG+ Q+ GS G G++ P IA++ + V ++D
Sbjct: 138 NYYITDEYNHRIQKYSPNGQYLQT-------IGSYGKANGEMALPQGIAINKQDEVYIAD 190
Query: 217 SNNHRVQIFDVNG---RVITSFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIF 272
+ N+R+Q+FD G RVI + G G Q PRG+ D G + V D+ NNRI F
Sbjct: 191 TYNNRIQVFDKKGEFKRVIGT-GIAGIGPYQFYHPRGINFDSTSGSLYVADTYNNRIMKF 249
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
T QFL G + +F V GNI + D N+R+ ++
Sbjct: 250 TNKDQFLYTVGNF----PQFVYPNQVLPDGKGNIYITDTGNNRVLLY 292
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 114/223 (51%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A + V D N+RV +G V G++G GQ P IAV ++
Sbjct: 34 PVAMARDVKGFLYVVDMGNNRVLKIDKNGEVVNAIGTLGEGPGQFNMPFGIAVDKEGNIL 93
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ N+R+Q F+ FQ F+ +G+ G + Q P IAV + N ++D N
Sbjct: 94 VADTANYRIQKFN---EEFQ----FIKSWGTKGKGSEQFSFPREIAVDSDNNYYITDEYN 146
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HR+Q + NG+ + + GS G G++ P+G+A++ Q + + D+ NNRIQ+F G+F
Sbjct: 147 HRIQKYSPNGQYLQTIGSYGKANGEMALPQGIAINKQDEVYIADTYNNRIQVFDKKGEFK 206
Query: 280 RAFGCWGSGDGEFKGLEGVAV---MSNGNILVCDRENHRIQVF 319
R G +G G ++ + ++G++ V D N+RI F
Sbjct: 207 RVIGTGIAGIGPYQFYHPRGINFDSTSGSLYVADTYNNRIMKF 249
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 132/297 (44%), Gaps = 42/297 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-----------LAFTWPRGI 103
F +P + +I + D+ N+RV + + ++ V + P +
Sbjct: 265 FVYPNQVLPDGKGNIYITDTGNNRVLL---YNEVGLTAVMKKNIGNERNGNTQYAGPYDV 321
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM---------GNKAGQLEHPHYIAVSN 154
+ +I V+DS NHR+ + G VGK+GS+ G+ GQ P IA
Sbjct: 322 ERDTNGNIFVSDSFNHRILKYDMSGKIVGKWGSLFGIGGPLGFGSLPGQFFVPRQIATDR 381
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
N V VSDS NHR+Q F + G + +GS G G + P IA+ + + +
Sbjct: 382 YNNVYVSDSVNHRIQ-------KFTNSGIALASYGSFGVLPGFFQFPSGIAIDSKGNIFI 434
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+DS NHR+Q F+ + +G +GS E + P +A+D + + V D NNRIQ F
Sbjct: 435 ADSENHRIQKFNQFFVYMKEWGKKGSGEAEFFQPMQLAIDSKDNVYVVDRINNRIQKFDN 494
Query: 275 DGQFLRAFGC------------WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G F+ +G W G G+ G+ + N + V D N+R+ ++
Sbjct: 495 EGNFITKWGTNHGAGNLDPLENWREGPGDLFLPIGIEIDINNKVYVTDTSNNRVNIY 551
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+V +GS + + L P +A + V D N+RV D NG V V G
Sbjct: 17 YVKSWGSELDSSKLLRTPVAMARDVKGFLYVVDMGNNRVLKIDKNGEV-------VNAIG 69
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
++G GQ P IAV ++V+D+ N+R+Q F+ + I S+G++G Q FPR
Sbjct: 70 TLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSFPR 129
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+AVD + D N+RIQ ++P+GQ+L+ G +G +GE +G+A+ + +
Sbjct: 130 EIAVDSDNNYYITDEYNHRIQKYSPNGQYLQTIGSYGKANGEMALPQGIAINKQDEVYIA 189
Query: 310 DRENHRIQVF 319
D N+RIQVF
Sbjct: 190 DTYNNRIQVF 199
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+ + S+GSE L+ P +A D +G++ V D GNNR+ +G+ + A G G G
Sbjct: 16 KYVKSWGSELDSSKLLRTPVAMARDVKGFLYVVDMGNNRVLKIDKNGEVVNAIGTLGEGP 75
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F G+AV GNILV D N+RIQ F
Sbjct: 76 GQFNMPFGIAVDKEGNILVADTANYRIQKF 105
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 52 PGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL-----KTNCVFLAFTWPRGIAVG 106
PG P GI + +N + V D+SN+RV + + D N + F P+GI V
Sbjct: 521 PGDLFLPIGIEIDINNKVYVTDTSNNRVNIYNENGDFLESFGSFNGMSGQFFSPQGIDVD 580
Query: 107 PDNSIVVADSSNHRVQVFQS 126
+I++ D R+Q F+
Sbjct: 581 SQGNIIITDGLLQRIQFFKK 600
>gi|324501953|gb|ADY40864.1| Protein lin-41 [Ascaris suum]
Length = 1195
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 115/235 (48%), Gaps = 56/235 (23%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FGS G GQ+ P I N R++V+D +N+R+Q+FD DG F+ KFGS G
Sbjct: 897 FGSEGTADGQVCRPWGICCDNKGRILVADRSNNRIQVFD-------KDGKFLMKFGSPGV 949
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
++GQ + P IAV++ N ++V+D +NHR+Q+F+ G + FG G G +P GVAV
Sbjct: 950 RSGQFDRPAGIAVNSMNEIVVADKDNHRIQVFNEKGEFLLKFGERGRTPGMFNYPWGVAV 1009
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLR--------------------------------- 280
+ I+V D+ N+R+QIF+P G ++R
Sbjct: 1010 NAYNQIAVSDTRNHRVQIFSPQGHYIRKCGFDSSLYYKNLDSPRGVCFLPDGLLVITDFN 1069
Query: 281 ----------------AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G GDG F +GV S G+ILVCD N+R+QV
Sbjct: 1070 NHRLAVVSSRGPTEMKCFGSEGEGDGCFCRPQGVTTDSEGHILVCDSRNNRVQVL 1124
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 124/252 (49%), Gaps = 21/252 (8%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------- 95
F GS G+ G P GI I+VAD SN+R+QV FD +
Sbjct: 895 FSFGSEGTADGQVCRPWGICCDNKGRILVADRSNNRIQV----FDKDGKFLMKFGSPGVR 950
Query: 96 --AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F P GIAV N IVVAD NHR+QVF G F+ KFG G G +P +AV+
Sbjct: 951 SGQFDRPAGIAVNSMNEIVVADKDNHRIQVFNEKGEFLLKFGERGRTPGMFNYPWGVAVN 1010
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
N++ VSD+ NHRVQIF G + G S+ K L+ P + ++
Sbjct: 1011 AYNQIAVSDTRNHRVQIFSPQGHYIRK----CGFDSSLYYK--NLDSPRGVCFLPDGLLV 1064
Query: 214 VSDSNNHRVQIFDVNGRV-ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
++D NNHR+ + G + FGSEG +G P+GV D +G+I V DS NNR+Q+
Sbjct: 1065 ITDFNNHRLAVVSSRGPTEMKCFGSEGEGDGCFCRPQGVTTDSEGHILVCDSRNNRVQVL 1124
Query: 273 TP-DGQFLRAFG 283
+ D + FG
Sbjct: 1125 SAEDMHCVATFG 1136
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 93/215 (43%), Gaps = 28/215 (13%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
+K K G RG PG F +P G+AV N I V+D+ NHRVQ+ P C F +
Sbjct: 983 EKGEFLLKFGERGRTPGMFNYPWGVAVNAYNQIAVSDTRNHRVQIFSPQGHYIRKCGFDS 1042
Query: 97 FTW------PRGIAVGPDNSIVVADSSNHRVQVFQSDG-TFVGKFGSMGNKAGQLEHPHY 149
+ PRG+ PD +V+ D +NHR+ V S G T + FGS G G P
Sbjct: 1043 SLYYKNLDSPRGVCFLPDGLLVITDFNNHRLAVVSSRGPTEMKCFGSEGEGDGCFCRPQG 1102
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM------------------ 191
+ + ++V DS N+RVQ+ TF G S
Sbjct: 1103 VTTDSEGHILVCDSRNNRVQVLSAED--MHCVATFGGSVPSASCGGKMGIASSTRSSPQS 1160
Query: 192 -GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
GN A L+ P I VS + V D ++ ++++
Sbjct: 1161 SGNDAVTLDRPTDICVSPEGTIYVVDFGSNCIRVY 1195
>gi|110639199|ref|YP_679408.1| hypothetical protein CHU_2818 [Cytophaga hutchinsonii ATCC 33406]
gi|110281880|gb|ABG60066.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
Length = 392
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 138/294 (46%), Gaps = 24/294 (8%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q K G GS G F + V D ++ VAD N R+Q ++
Sbjct: 22 QTYTYSTKWGGTGSAAGKFDDIGALDVDADGNVYVADWRNFRIQ------KFSNTGTYIT 75
Query: 97 -----------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE 145
F + V D +I+V+D+ V+ + + G F+ KFGS G + GQ
Sbjct: 76 SWGTEGTGDNQFKRVNNLCVDNDGNILVSDAGASVVKKYTNTGVFISKFGSSGKQEGQFN 135
Query: 146 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
+ V N + V D NN RVQ F S+GTF+ K+GS G AG +
Sbjct: 136 ENQGMFVDADNNIFVCDVNNFRVQ-------KFSSNGTFLLKWGSYGTGAGSFNGNFDLT 188
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG 265
+ + V V+D NN+R+Q F G I + G G+ EG K P + +D G + V + G
Sbjct: 189 IDASGNVYVADVNNNRIQKFTNTGVYIKTIGGLGTTEGLFKQPIAIDIDANGDLYVAELG 248
Query: 266 NNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
N RIQ T +G +++++G GSG+G+F L G+ V NG++ V D + +Q F
Sbjct: 249 NRRIQKLTSEGVYIQSWGSQGSGNGQFSSLYGICVDKNGSVFVSDSDRDNVQKF 302
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 110/240 (45%), Gaps = 24/240 (10%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--------- 96
G+ G+ F + V D +I+V+D+ V+ VF++
Sbjct: 78 GTEGTGDNQFKRVNNLCVDNDGNILVSDAGASVVK------KYTNTGVFISKFGSSGKQE 131
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F +G+ V DN+I V D +N RVQ F S+GTF+ K+GS G AG + +
Sbjct: 132 GQFNENQGMFVDADNNIFVCDVNNFRVQKFSSNGTFLLKWGSYGTGAGSFNGNFDLTIDA 191
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ V V+D NN+R+Q F + G ++ G +G G + P I + + V
Sbjct: 192 SGNVYVADVNNNRIQ-------KFTNTGVYIKTIGGLGTTEGLFKQPIAIDIDANGDLYV 244
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
++ N R+Q G I S+GS+GS GQ G+ VD G + V DS + +Q F P
Sbjct: 245 AELGNRRIQKLTSEGVYIQSWGSQGSGNGQFSSLYGICVDKNGSVFVSDSDRDNVQKFVP 304
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 24 IGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF 83
+ G + +Y K GS G + G F +G+ V DN+I V D +N RVQ
Sbjct: 103 VSDAGASVVKKYTNTGVFISKFGSSGKQEGQFNENQGMFVDADNNIFVCDVNNFRVQ--- 159
Query: 84 PHFDLKTNCVFLAFTWPRGIAVGPDN-----------SIVVADSSNHRVQVFQSDGTFVG 132
+N FL G G N ++ VAD +N+R+Q F + G ++
Sbjct: 160 ---KFSSNGTFLLKWGSYGTGAGSFNGNFDLTIDASGNVYVADVNNNRIQKFTNTGVYIK 216
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
G +G G + P I + + V++ N R+Q S+G ++ +GS G
Sbjct: 217 TIGGLGTTEGLFKQPIAIDIDANGDLYVAELGNRRIQ-------KLTSEGVYIQSWGSQG 269
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
+ GQ + I V V VSDS+ VQ F
Sbjct: 270 SGNGQFSSLYGICVDKNGSVFVSDSDRDNVQKF 302
>gi|443692324|gb|ELT93941.1| hypothetical protein CAPTEDRAFT_1292 [Capitella teleta]
Length = 281
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 145/282 (51%), Gaps = 20/282 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWP 100
+ I G+ G P G+A + IVV++ N RVQ+ F V P
Sbjct: 15 MLININRYGTGKGELRDPLGVACLLNGDIVVSEWGNKRVQI-FNDAGHHVAEVGKGKIGP 73
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
+G+AV +IVV D + R+QVF G+ + +G G+ P +AVS +V
Sbjct: 74 QGVAVTLRGNIVVTDGHHKRLQVFSPSGSSLAIWG-----LGRFYGPCGLAVSPNGNCVV 128
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+D + + V++ + T + +FG+ GN + ++P Y+A+ N +IVSDSNNH
Sbjct: 129 TDIAENAIS-------VYRGEKTCLARFGTKGNADDKFDNPLYVAIGQYNEIIVSDSNNH 181
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
+++FD G I FG EG+ GQ KFPRGV D++G I V D NNR+ +F+ G+FL
Sbjct: 182 AIKVFDSKGAFIRKFGGEGTGNGQFKFPRGVCTDERGNILVADRNNNRVSLFSSQGKFL- 240
Query: 281 AFGC-WGSGDGEFKGLEGVAVMSNGNILVCDRENHR--IQVF 319
C + D + GVA+ GN++V + +R ++VF
Sbjct: 241 ---CNLLTQDNGIRDPYGVAISMTGNLVVTESGENRAALKVF 279
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 21/156 (13%)
Query: 33 SQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC 92
S Y ++ + G++G+ F P +A+G N I+V+DS+NH ++V FD K
Sbjct: 137 SVYRGEKTCLARFGTKGNADDKFDNPLYVAIGQYNEIIVSDSNNHAIKV----FDSKGAF 192
Query: 93 VFL---------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
+ F +PRG+ +I+VAD +N+RV +F S G F+ + N
Sbjct: 193 IRKFGGEGTGNGQFKFPRGVCTDERGNILVADRNNNRVSLFSSQGKFLCNLLTQDNG--- 249
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ 179
+ P+ +A+S T ++V++S +R + +VFQ
Sbjct: 250 IRDPYGVAISMTGNLVVTESGENRAAL-----KVFQ 280
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
+ +N R + + G G+L P +A ++VS+ N RVQIF+ G
Sbjct: 1 MLQINSRGTRRSANMLININRYGTGKGELRDPLGVACLLNGDIVVSEWGNKRVQIFNDAG 60
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+ G +G++ P+GVAV +G I V D + R+Q+F+P G L +G
Sbjct: 61 HHVAEVG-----KGKIG-PQGVAVTLRGNIVVTDGHHKRLQVFSPSGSSLAIWGL----- 109
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G F G G+AV NGN +V D + I V+
Sbjct: 110 GRFYGPCGLAVSPNGNCVVTDIAENAISVY 139
>gi|406962431|gb|EKD88795.1| NHL repeat containing protein, partial [uncultured bacterium]
Length = 623
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 157/337 (46%), Gaps = 41/337 (12%)
Query: 14 FLLQTLLVSGIGQVGTTPRSQ------YLQKRRL---QFKIGSRGSEPGCFTWPRGIAVG 64
+Q LVS I GT P + Y K + GS G+E G FT +A+G
Sbjct: 190 LFIQKSLVSSIWTYGTVPSAPVVKVDPYADKMTMFTPDLFFGSTGTENGQFTGAHDLAIG 249
Query: 65 PDNSIVVADSSNHRVQV------------CFPHFDLKTNCVFLAFTWPRGIAVGPDNSIV 112
P I VAD+ NHR+Q F D N F P GIAV PD S+
Sbjct: 250 PTGDIYVADARNHRIQRFSAEGVFISTWGSFATVDSGGNAPGGTFNEPWGIAVAPDGSVY 309
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH--PHYIAVSNTNRVIVSDSNNHRVQI 170
VAD+ N+R+Q F +DG FV +G G + P I V+ +V+V+D+ N+RV +
Sbjct: 310 VADTWNYRIQKFTADGKFVTMWGIAGTADSPVSFWGPRGIVVNARGQVLVTDTGNNRVLV 369
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
+D N G F+ +FG G G+ + P +A+ N + V+D+ N R+Q+F
Sbjct: 370 YDAN-------GGFLSQFGLNGMNQGEFDEPVGLAIDNEGLLYVADTWNQRIQVFQPLSD 422
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN--------NRIQIFTPDGQFLRAF 282
I S+G E Q+ G +V+++ YI V +G+ RI F G F+R +
Sbjct: 423 EI-SYGY--LREWQVSAWEGQSVNNKPYIDVDQNGHVFITDPDAYRILEFDNVGNFIRGW 479
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G + SG F G+AV G + V D EN + F
Sbjct: 480 GDYSSGIDGFGMPIGIAVDVQGKVWVSDAENGYMLRF 516
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 116/243 (47%), Gaps = 17/243 (6%)
Query: 45 IGSRGSEPG-CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-------LA 96
+ S G+ PG F P GIAV PD S+ VAD+ N+R+Q T ++
Sbjct: 283 VDSGGNAPGGTFNEPWGIAVAPDGSVYVADTWNYRIQKFTADGKFVTMWGIAGTADSPVS 342
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F PRGI V ++V D+ N+RV V+ ++G F+ +FG G G+ + P +A+ N
Sbjct: 343 FWGPRGIVVNARGQVLVTDTGNNRVLVYDANGGFLSQFGLNGMNQGEFDEPVGLAIDNEG 402
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ---LEHPHYIAVSNTNRVI 213
+ V+D+ N R+Q+F SD G A + + + YI V V
Sbjct: 403 LLYVADTWNQRIQVFQP-----LSDEISYGYLREWQVSAWEGQSVNNKPYIDVDQNGHVF 457
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
++D + +R+ FD G I +G S P G+AVD QG + V D+ N + F+
Sbjct: 458 ITDPDAYRILEFDNVGNFIRGWGDYSSGIDGFGMPIGIAVDVQGKVWVSDAENGYMLRFS 517
Query: 274 -PD 275
PD
Sbjct: 518 MPD 520
>gi|357626494|gb|EHJ76567.1| hypothetical protein KGM_18303 [Danaus plexippus]
Length = 303
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 139/285 (48%), Gaps = 23/285 (8%)
Query: 55 FTW-----PRGIAVGP-DNSIVVADSSNHRVQVC-FPHFDLKTNCVFLAFTWPRGIA-VG 106
++W P G+ V P +N + + +H V V + + P IA +
Sbjct: 22 YSWRKTSRPCGVGVSPWNNHLYICGMDSHSVLVVERTQAKIVSRLSCEGMLCPVHIAFMK 81
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNN 165
P I V D H + VF DG ++ G G++ G L P IA N +N++ V D+ N
Sbjct: 82 PLGEIYVTDKWKHCIHVFSKDGDYLRSLGQKGSRVGMLRSPEGIATDNISNQIYVVDTGN 141
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAG----------QLEHPHYIAVSNTNRVIVS 215
RVQ+ D G+ G V N A + P +AV+ +RVIV
Sbjct: 142 DRVQVLDTEGKFIDQYG--VATRAQTSNTANVWTQQETLCTEFNAPTAVAVTK-DRVIVL 198
Query: 216 DSNNHRVQIFDVNGR-VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
DS N RV+I++ + IT FGS G +GQ + P + VD G+I VGDSGN R+QIF P
Sbjct: 199 DSGNRRVKIYNKQDKNKITEFGSLGHRKGQFRQPEVLTVDPLGFILVGDSGNCRVQIFKP 258
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+GQ +R FG G+ G+F + G+ V +I+V D +NH + F
Sbjct: 259 NGQLVRVFGGLGADPGKFGWISGIYVTKQLDIIVSDTKNHNVNFF 303
>gi|390335759|ref|XP_003724215.1| PREDICTED: uncharacterized protein LOC590474 [Strongylocentrotus
purpuratus]
Length = 813
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 124/245 (50%), Gaps = 21/245 (8%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-------CFPHFDLK--- 89
RL ++GS+G G +P+GI I++ D NH+VQV C F +
Sbjct: 580 RLLRQMGSKGGGAGQMQFPKGICSNSAGHIIITDCYNHKVQVWDLSTGRCLKQFGSRGQS 639
Query: 90 TNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
NC F P G+ ++I V D +N V+VF G F+ G G + GQ +P +
Sbjct: 640 NNC----FDSPTGVVCDKQDNIYVCDYNNGCVKVFNPAGMFIRLIGKKGERDGQFRNPAF 695
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
IA + ++++D+ H VQ VF S GT++ +FG+ G G L P I V
Sbjct: 696 IAFTQGGELLITDAFKHCVQ-------VFSSQGTYLYRFGNWGTSPGDLNCPSGITVDAQ 748
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
+ V++ NHRV++F+ +G + G GSEEGQL P GV++ G + V DSGN R+
Sbjct: 749 GYIYVANRGNHRVEVFNPSGSYALNLGRHGSEEGQLDEPLGVSITKDGRLLVSDSGNKRL 808
Query: 270 QIFTP 274
Q+ P
Sbjct: 809 QLLWP 813
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 114/224 (50%), Gaps = 8/224 (3%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQ-SDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
+P+GI I++ D NH+VQV+ S G + +FGS G + P +
Sbjct: 595 MQFPKGICSNSAGHIIITDCYNHKVQVWDLSTGRCLKQFGSRGQSNNCFDSPTGVVCDKQ 654
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+ + V D NN V +VF G F+ G G + GQ +P +IA + ++++
Sbjct: 655 DNIYVCDYNNGCV-------KVFNPAGMFIRLIGKKGERDGQFRNPAFIAFTQGGELLIT 707
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D+ H VQ+F G + FG+ G+ G L P G+ VD QGYI V + GN+R+++F P
Sbjct: 708 DAFKHCVQVFSSQGTYLYRFGNWGTSPGDLNCPSGITVDAQGYIYVANRGNHRVEVFNPS 767
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G + G GS +G+ GV++ +G +LV D N R+Q+
Sbjct: 768 GSYALNLGRHGSEEGQLDEPLGVSITKDGRLLVSDSGNKRLQLL 811
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 8/225 (3%)
Query: 97 FTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F P G+ V +N V D H V + +G + + GS G AGQ++ P I ++
Sbjct: 546 FEKPVGVHVLEKLNNCFAVVDELQHCVMIINEEGRLLRQMGSKGGGAGQMQFPKGICSNS 605
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+I++D NH+VQ++D+ S G + +FGS G + P + + + V
Sbjct: 606 AGHIIITDCYNHKVQVWDL------STGRCLKQFGSRGQSNNCFDSPTGVVCDKQDNIYV 659
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
D NN V++F+ G I G +G +GQ + P +A G + + D+ + +Q+F+
Sbjct: 660 CDYNNGCVKVFNPAGMFIRLIGKKGERDGQFRNPAFIAFTQGGELLITDAFKHCVQVFSS 719
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G +L FG WG+ G+ G+ V + G I V +R NHR++VF
Sbjct: 720 QGTYLYRFGNWGTSPGDLNCPSGITVDAQGYIYVANRGNHRVEVF 764
>gi|219852016|ref|YP_002466448.1| NHL repeat containing protein [Methanosphaerula palustris E1-9c]
gi|219546275|gb|ACL16725.1| NHL repeat containing protein [Methanosphaerula palustris E1-9c]
Length = 391
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 140/275 (50%), Gaps = 20/275 (7%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQ--VCFPHFDLKTNCVFLA--------FTWPRGIA 104
F P I+ S+ V D +NHR+Q F +A F P G+A
Sbjct: 46 FNQPARISFDTHGSVFVDDMNNHRIQKFTTVGGFITAWGSKGVADPPSAAGTFLSPLGVA 105
Query: 105 VGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 164
V + + VAD HR+QV + FG N G+L P IAV + + V V D
Sbjct: 106 VDSQDYLYVADRDIHRIQVMDPSRIWT-VFGP--NGTGELLQPSDIAVDSFDNVYVVDWG 162
Query: 165 NHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 224
++R++ FD+ GT +G++G++G+ Q P IA+ N + V V+D+ N+R++
Sbjct: 163 HNRIRKFDLQ-------GTPLGEWGTLGSGNLQFNGPRGIAIDNADNVYVADTGNNRIEK 215
Query: 225 FDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGC 284
FD NG + + G+ G+ GQL P GV VD G + V D+GNNR++ F G FL G
Sbjct: 216 FDSNGAYLATIGTSGTGNGQLSGPWGVDVDTAGNVYVADTGNNRVEKFNRSGAFLATIGT 275
Query: 285 WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+G+G+F V+V S G + V D N+RIQ F
Sbjct: 276 SGTGNGQFSMPYDVSVNSVGMVYVADTGNNRIQFF 310
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 125/239 (52%), Gaps = 20/239 (8%)
Query: 46 GSRG-----SEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
GS+G S G F P G+AV + + VAD HR+QV P + VF
Sbjct: 84 GSKGVADPPSAAGTFLSPLGVAVDSQDYLYVADRDIHRIQVMDPS---RIWTVFGPNGTG 140
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P IAV +++ V D ++R++ F GT +G++G++G+ Q P IA+ N
Sbjct: 141 ELLQPSDIAVDSFDNVYVVDWGHNRIRKFDLQGTPLGEWGTLGSGNLQFNGPRGIAIDNA 200
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+ V V+D+ N+R++ FD S+G ++ G+ G GQL P + V V V+
Sbjct: 201 DNVYVADTGNNRIEKFD-------SNGAYLATIGTSGTGNGQLSGPWGVDVDTAGNVYVA 253
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
D+ N+RV+ F+ +G + + G+ G+ GQ P V+V+ G + V D+GNNRIQ F P
Sbjct: 254 DTGNNRVEKFNRSGAFLATIGTSGTGNGQFSMPYDVSVNSVGMVYVADTGNNRIQFFLP 312
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 96/219 (43%), Gaps = 42/219 (19%)
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVF------------QSDGTFVGKFGS 190
+ P I+ V V D NNHR+Q F G + GTF+ G
Sbjct: 45 EFNQPARISFDTHGSVFVDDMNNHRIQKFTTVGGFITAWGSKGVADPPSAAGTFLSPLGV 104
Query: 191 M------------------------------GNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
N G+L P IAV + + V V D ++
Sbjct: 105 AVDSQDYLYVADRDIHRIQVMDPSRIWTVFGPNGTGELLQPSDIAVDSFDNVYVVDWGHN 164
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R++ FD+ G + +G+ GS Q PRG+A+D+ + V D+GNNRI+ F +G +L
Sbjct: 165 RIRKFDLQGTPLGEWGTLGSGNLQFNGPRGIAIDNADNVYVADTGNNRIEKFDSNGAYLA 224
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+G+G+ G GV V + GN+ V D N+R++ F
Sbjct: 225 TIGTSGTGNGQLSGPWGVDVDTAGNVYVADTGNNRVEKF 263
>gi|229166835|ref|ZP_04294583.1| Cell surface protein [Bacillus cereus AH621]
gi|423594086|ref|ZP_17570117.1| hypothetical protein IIG_02954 [Bacillus cereus VD048]
gi|228616638|gb|EEK73715.1| Cell surface protein [Bacillus cereus AH621]
gi|401224887|gb|EJR31439.1| hypothetical protein IIG_02954 [Bacillus cereus VD048]
Length = 398
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 143/281 (50%), Gaps = 18/281 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTW 99
IG+ G PG F P GIAV + +I+VAD++N+R+Q F + F++
Sbjct: 64 IGTLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSF 123
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PR IAV DN+ + D NHR+Q + DG ++ GS G G++ P IA++ + V
Sbjct: 124 PREIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGSYGKANGEVALPQGIAINKQDEVY 183
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSN 218
++D+ N+R+Q+FD G + GT + G Q HP I +T+ + V+D+
Sbjct: 184 IADTYNNRIQVFDKKGEFQRVIGTGIAGLGPY-----QFYHPRGINFDSTSGSLYVADTY 238
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ- 277
N+R+ F + + + G+ Q +P V D +G I + D+GNNR+ ++ G
Sbjct: 239 NNRIMKFTNKDQFLYTVGN----FFQFVYPNQVFPDGKGNIYITDTGNNRVLLYNEVGLT 294
Query: 278 --FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+ G +G+ ++ G V +NGN+ V D NHRI
Sbjct: 295 AVMKKTIGNERNGNTQYAGPYDVERGTNGNVFVSDSFNHRI 335
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 10/223 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A + V D N+R+ +G V G++G GQ P IAV ++
Sbjct: 30 PVAMARDAKGFLYVVDMGNNRILKIDKNGEVVDAIGTLGEGPGQFNMPFGIAVDKEGNIL 89
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ N+R+Q F+ FQ F+ +G+ G + Q P IAV + N ++D N
Sbjct: 90 VADTANYRIQKFN---EEFQ----FIKSWGTKGKGSEQFSFPREIAVDSDNNYYITDEYN 142
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HR+Q + +G+ I + GS G G++ P+G+A++ Q + + D+ NNRIQ+F G+F
Sbjct: 143 HRIQKYSPDGQYIQTIGSYGKANGEVALPQGIAINKQDEVYIADTYNNRIQVFDKKGEFQ 202
Query: 280 RAFGCWGSGDGEFKGLEGVAV---MSNGNILVCDRENHRIQVF 319
R G +G G ++ + ++G++ V D N+RI F
Sbjct: 203 RVIGTGIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRIMKF 245
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+V +GS + + L P +A + V D N+R+ D NG V V G
Sbjct: 13 YVKSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRILKIDKNGEV-------VDAIG 65
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
++G GQ P IAV ++V+D+ N+R+Q F+ + I S+G++G Q FPR
Sbjct: 66 TLGEGPGQFNMPFGIAVDKEGNILVADTANYRIQKFNEEFQFIKSWGTKGKGSEQFSFPR 125
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+AVD + D N+RIQ ++PDGQ+++ G +G +GE +G+A+ + +
Sbjct: 126 EIAVDSDNNYYITDEYNHRIQKYSPDGQYIQTIGSYGKANGEVALPQGIAINKQDEVYIA 185
Query: 310 DRENHRIQVF 319
D N+RIQVF
Sbjct: 186 DTYNNRIQVF 195
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 120/262 (45%), Gaps = 39/262 (14%)
Query: 30 TPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
+P QY+Q IGS G G P+GIA+ + + +AD+ N+R+QV FD K
Sbjct: 149 SPDGQYIQT------IGSYGKANGEVALPQGIAINKQDEVYIADTYNNRIQV----FDKK 198
Query: 90 --------TNCVFLA---FTWPRGIAVGPDN-SIVVADSSNHRVQVFQSDGTFVGKFGSM 137
T L F PRGI + S+ VAD+ N+R+ F + F+ G+
Sbjct: 199 GEFQRVIGTGIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRIMKFTNKDQFLYTVGNF 258
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
Q +P+ + + ++D+ N+RV +++ G T G+ N Q
Sbjct: 259 F----QFVYPNQVFPDGKGNIYITDTGNNRVLLYNEVGLTAVMKKTI----GNERNGNTQ 310
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSE---------GSEEGQLKFP 248
P+ + V VSDS NHR+ +D++G+++ +GS GS GQ P
Sbjct: 311 YAGPYDVERGTNGNVFVSDSFNHRILKYDISGKIVAKWGSLFGTGGPLRFGSLPGQFFVP 370
Query: 249 RGVAVDDQGYISVGDSGNNRIQ 270
R +A D + V DS N+RIQ
Sbjct: 371 RQIATDRYNNVYVSDSVNHRIQ 392
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 9/192 (4%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWPRG 102
G G P F PRGI + S+ VAD+ N+R+ + F + D L T F F +P
Sbjct: 208 GIAGLGPYQFYHPRGINFDSTSGSLYVADTYNNRI-MKFTNKDQFLYTVGNFFQFVYPNQ 266
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG---QLEHPHYIAVSNTNRVI 159
+ +I + D+ N+RV ++ G ++GN+ Q P+ + V
Sbjct: 267 VFPDGKGNIYITDTGNNRVLLYNEVGLTAVMKKTIGNERNGNTQYAGPYDVERGTNGNVF 326
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM--GNKAGQLEHPHYIAVSNTNRVIVSDS 217
VSDS NHR+ +D++G++ G+ G G + G+ GQ P IA N V VSDS
Sbjct: 327 VSDSFNHRILKYDISGKIVAKWGSLFGTGGPLRFGSLPGQFFVPRQIATDRYNNVYVSDS 386
Query: 218 NNHRVQIFDVNG 229
NHR+Q + G
Sbjct: 387 VNHRIQKLPIQG 398
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+ + S+GSE L+ P +A D +G++ V D GNNRI +G+ + A G G G
Sbjct: 12 KYVKSWGSELDTSKLLRTPVAMARDAKGFLYVVDMGNNRILKIDKNGEVVDAIGTLGEGP 71
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F G+AV GNILV D N+RIQ F
Sbjct: 72 GQFNMPFGIAVDKEGNILVADTANYRIQKF 101
>gi|21703246|gb|AAM76120.1|AF483040_1 lin-41-like protein [Boltenia villosa]
Length = 119
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 81/108 (75%)
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
++++V DS NHR+Q+FD GR + FG+EGS EGQ K+PRGVA D G I VGDSGNNR
Sbjct: 5 VSKIVVGDSGNHRIQVFDKYGRFLFKFGTEGSNEGQFKYPRGVATDQHGNIIVGDSGNNR 64
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+QIF DG F+ +FG WGS G+ KGLEGV ++ N +I++ DRENHR+
Sbjct: 65 VQIFRNDGSFIYSFGGWGSEPGQMKGLEGVTLLQNRDIIISDRENHRV 112
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 7/116 (6%)
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
P + IVV DS NHR+QVF G F+ KFG+ G+ GQ ++P +A +IV DS N+
Sbjct: 4 PVSKIVVGDSGNHRIQVFDKYGRFLFKFGTEGSNEGQFKYPRGVATDQHGNIIVGDSGNN 63
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
RVQI F++DG+F+ FG G++ GQ++ + + +I+SD NHRV
Sbjct: 64 RVQI-------FRNDGSFIYSFGGWGSEPGQMKGLEGVTLLQNRDIIISDRENHRV 112
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
++++V DS NHR+Q+FD GR F+ KFG+ G+ GQ ++P +A +IV
Sbjct: 5 VSKIVVGDSGNHRIQVFDKYGR-------FLFKFGTEGSNEGQFKYPRGVATDQHGNIIV 57
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
DS N+RVQIF +G I SFG GSE GQ+K GV + I + D N+R+
Sbjct: 58 GDSGNNRVQIFRNDGSFIYSFGGWGSEPGQMKGLEGVTLLQNRDIIISDRENHRV 112
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 13/113 (11%)
Query: 65 PDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------AFTWPRGIAVGPDNSIVVAD 115
P + IVV DS NHR+QV FD +F F +PRG+A +I+V D
Sbjct: 4 PVSKIVVGDSGNHRIQV----FDKYGRFLFKFGTEGSNEGQFKYPRGVATDQHGNIIVGD 59
Query: 116 SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
S N+RVQ+F++DG+F+ FG G++ GQ++ + + +I+SD NHRV
Sbjct: 60 SGNNRVQIFRNDGSFIYSFGGWGSEPGQMKGLEGVTLLQNRDIIISDRENHRV 112
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 43/61 (70%)
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
I VGDSGN+RIQ+F G+FL FG GS +G+FK GVA +GNI+V D N+R+Q+
Sbjct: 8 IVVGDSGNHRIQVFDKYGRFLFKFGTEGSNEGQFKYPRGVATDQHGNIIVGDSGNNRVQI 67
Query: 319 F 319
F
Sbjct: 68 F 68
>gi|156407035|ref|XP_001641350.1| predicted protein [Nematostella vectensis]
gi|156228488|gb|EDO49287.1| predicted protein [Nematostella vectensis]
Length = 817
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 149/300 (49%), Gaps = 30/300 (10%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD-LKTNCVFL 95
+K + +IG++G G F+ P A I V D N+R+QV P L+T F
Sbjct: 530 RKYQAIIEIGAKGQGQGDFSGPWCSAENSAGEIFVTDRQNNRLQVFTPDGGFLRTIGEFG 589
Query: 96 A----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
+ PRG+ V ++ ++V+D+ NHR+QVF G+F F G++ G L P+ +A
Sbjct: 590 SGKGQLIEPRGVVVSANDDVIVSDTGNHRIQVFAKSGSFKFMFSGAGSREGYLRKPYGVA 649
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V N +IVSD N RVQ+F+ G V + G A + +Y + + +
Sbjct: 650 VDNDQNIIVSDLGNRRVQVFNPVGEVVRVIG------------ADSIIESYY-CIYHDHH 696
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK--------FPRGVAVDDQGYISVGD 263
IVSDS + +++F +G ++ FG + G L RG+A+D GY+ V D
Sbjct: 697 YIVSDSGSSTIKVFSQDGALVQEFGGKKGALGLLSKSTGMTFNHLRGLAIDKCGYLLVCD 756
Query: 264 SGNNRIQIFTPDGQF----LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
S N+ IQIF D + + FG G G+FK V+ NG I+VC+ N R+Q+F
Sbjct: 757 SWNDCIQIFKHDASWRFTLVGKFGSEGEKIGKFKQPTTATVLRNGRIVVCEFHNCRVQIF 816
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 7/167 (4%)
Query: 117 SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
S +++V + + G+ G G P A ++ + V+D N+R+Q
Sbjct: 521 SRFKMEVIPRKYQAIIEIGAKGQGQGDFSGPWCSAENSAGEIFVTDRQNNRLQ------- 573
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF DG F+ G G+ GQL P + VS + VIVSD+ NHR+Q+F +G F
Sbjct: 574 VFTPDGGFLRTIGEFGSGKGQLIEPRGVVVSANDDVIVSDTGNHRIQVFAKSGSFKFMFS 633
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
GS EG L+ P GVAVD+ I V D GN R+Q+F P G+ +R G
Sbjct: 634 GAGSREGYLRKPYGVAVDNDQNIIVSDLGNRRVQVFNPVGEVVRVIG 680
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 24/200 (12%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD----LKTNCVFLA 96
+F GS G P G+AV D +I+V+D N RVQV P + + + + +
Sbjct: 628 FKFMFSGAGSREGYLRKPYGVAVDNDQNIIVSDLGNRRVQVFNPVGEVVRVIGADSIIES 687
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE--------HPH 148
+ + D+ +V+DS + ++VF DG V +FG G L H
Sbjct: 688 Y-----YCIYHDHHYIVSDSGSSTIKVFSQDGALVQEFGGKKGALGLLSKSTGMTFNHLR 742
Query: 149 YIAVSNTNRVIVSDSNNHRVQIF--DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
+A+ ++V DS N +QIF D + R T VGKFGS G K G+ + P V
Sbjct: 743 GLAIDKCGYLLVCDSWNDCIQIFKHDASWRF-----TLVGKFGSEGEKIGKFKQPTTATV 797
Query: 207 SNTNRVIVSDSNNHRVQIFD 226
R++V + +N RVQIF+
Sbjct: 798 LRNGRIVVCEFHNCRVQIFE 817
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 57/99 (57%)
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
++++ + I G++G +G P A + G I V D NNR+Q+FTPDG FLR
Sbjct: 524 KMEVIPRKYQAIIEIGAKGQGQGDFSGPWCSAENSAGEIFVTDRQNNRLQVFTPDGGFLR 583
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G +GSG G+ GV V +N +++V D NHRIQVF
Sbjct: 584 TIGEFGSGKGQLIEPRGVVVSANDDVIVSDTGNHRIQVF 622
>gi|156359551|ref|XP_001624831.1| predicted protein [Nematostella vectensis]
gi|156211633|gb|EDO32731.1| predicted protein [Nematostella vectensis]
Length = 241
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 122/229 (53%), Gaps = 13/229 (5%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ---LEHPHYIAVS 153
F P GIA D +I +AD +N R+Q+F DG + + + G+ L P +
Sbjct: 15 FQDPVGIATANDGTIAIADYNNDRIQLFTPDGVLIRVLTHVITEKGRKIALLSPAGVVFD 74
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
++V++ HR+ V S G+ + KFG +G GQ PH +++ R+I
Sbjct: 75 KGGNLVVAERGRHRIT-------VMTSTGSLIHKFGKLGKAFGQFRTPHGVSIDRIGRII 127
Query: 214 VSDSNNHRVQIFDVNGRVITSFGS---EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
V+D+ N+R+Q+FD NG + +FG +E+ Q P G+AV +I V D + ++
Sbjct: 128 VADTANNRIQVFDQNGEFVFAFGDYEDPATEDVQFSAPSGLAVYKDQFILVCDYNRDCVK 187
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+F+ DG F+ FG G+ G+F G E VA + +G ++V D+ NHR+ +F
Sbjct: 188 VFSLDGAFITEFGQPGTCPGQFCGPEAVAALPDGRVVVSDKGNHRLVIF 236
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 121/242 (50%), Gaps = 18/242 (7%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH---FDLKTNCVF---- 94
Q +G +G+ F P GIA D +I +AD +N R+Q+ P + T+ +
Sbjct: 2 QTSLGGKGTAHTNFQDPVGIATANDGTIAIADYNNDRIQLFTPDGVLIRVLTHVITEKGR 61
Query: 95 -LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
+A P G+ ++VVA+ HR+ V S G+ + KFG +G GQ PH +++
Sbjct: 62 KIALLSPAGVVFDKGGNLVVAERGRHRITVMTSTGSLIHKFGKLGKAFGQFRTPHGVSID 121
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAG---QLEHPHYIAVSNTN 210
R+IV+D+ N+R+Q+FD NG FV FG + A Q P +AV
Sbjct: 122 RIGRIIVADTANNRIQVFDQNGE-------FVFAFGDYEDPATEDVQFSAPSGLAVYKDQ 174
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
++V D N V++F ++G IT FG G+ GQ P VA G + V D GN+R+
Sbjct: 175 FILVCDYNRDCVKVFSLDGAFITEFGQPGTCPGQFCGPEAVAALPDGRVVVSDKGNHRLV 234
Query: 271 IF 272
IF
Sbjct: 235 IF 236
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 7/189 (3%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
G G + P IA +N + ++D NN R+Q+F +G + + G
Sbjct: 5 LGGKGTAHTNFQDPVGIATANDGTIAIADYNNDRIQLFTPDGVLIR---VLTHVITEKGR 61
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
K L P + ++V++ HR+ + G +I FG G GQ + P GV++
Sbjct: 62 KIALLS-PAGVVFDKGGNLVVAERGRHRITVMTSTGSLIHKFGKLGKAFGQFRTPHGVSI 120
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW---GSGDGEFKGLEGVAVMSNGNILVCD 310
D G I V D+ NNRIQ+F +G+F+ AFG + + D +F G+AV + ILVCD
Sbjct: 121 DRIGRIIVADTANNRIQVFDQNGEFVFAFGDYEDPATEDVQFSAPSGLAVYKDQFILVCD 180
Query: 311 RENHRIQVF 319
++VF
Sbjct: 181 YNRDCVKVF 189
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 72/144 (50%), Gaps = 16/144 (11%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF------ 94
L K G G G F P G+++ I+VAD++N+R+QV FD VF
Sbjct: 98 LIHKFGKLGKAFGQFRTPHGVSIDRIGRIIVADTANNRIQV----FDQNGEFVFAFGDYE 153
Query: 95 ------LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
+ F+ P G+AV D I+V D + V+VF DG F+ +FG G GQ P
Sbjct: 154 DPATEDVQFSAPSGLAVYKDQFILVCDYNRDCVKVFSLDGAFITEFGQPGTCPGQFCGPE 213
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFD 172
+A RV+VSD NHR+ IF+
Sbjct: 214 AVAALPDGRVVVSDKGNHRLVIFE 237
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
TS G +G+ + P G+A + G I++ D N+RIQ+FTPDG +R + G
Sbjct: 3 TSLGGKGTAHTNFQDPVGIATANDGTIAIADYNNDRIQLFTPDGVLIRVLTHVITEKGRK 62
Query: 293 KGL---EGVAVMSNGNILVCDRENHRIQVF 319
L GV GN++V +R HRI V
Sbjct: 63 IALLSPAGVVFDKGGNLVVAERGRHRITVM 92
>gi|219853190|ref|YP_002467622.1| SMP-30/Gluconolaconase/LRE domain-containing protein
[Methanosphaerula palustris E1-9c]
gi|219547449|gb|ACL17899.1| SMP-30/Gluconolaconase/LRE domain protein [Methanosphaerula
palustris E1-9c]
Length = 343
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 141/287 (49%), Gaps = 42/287 (14%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
+ GS G G F P G+AV ++ V D+ +RVQ + F+
Sbjct: 5 QWGSIGWGYGQFGDPCGVAVDSAGNVYVVDTGTNRVQ------KFTSTGTFITQWGSAGT 58
Query: 97 ----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
F GIAV ++ V D N RVQ F S G F+ K+GS G GQ + P IAV
Sbjct: 59 RNRQFFGIGGIAVDSAGNVYVTDEHNSRVQKFDSTGIFITKWGSYGPGDGQFKSPEGIAV 118
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
N V V D+ N+++Q F SDGTF+ K+G+ + IAV + V
Sbjct: 119 DNAGNVYVVDTVNNQIQ-------KFTSDGTFITKWGTRASG---------IAVDSDGNV 162
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V+D+ +++VQ F +G + ++G+ GSE GQ P G+AVD+ G + V D GN R+Q F
Sbjct: 163 YVTDATSNQVQKFTSDGTHLLNWGTSGSENGQFSSPEGIAVDNAGNVYVNDVGNQRVQKF 222
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
TPD F+ ++ G G+ V S+ + V DR N RIQ F
Sbjct: 223 TPDSTFVTSWET---------GASGITVDSDSYVYVVDRGNCRIQKF 260
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 52/87 (59%)
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
T +GS G GQ P GVAVD G + V D+G NR+Q FT G F+ +G G+ + +F
Sbjct: 4 TQWGSIGWGYGQFGDPCGVAVDSAGNVYVVDTGTNRVQKFTSTGTFITQWGSAGTRNRQF 63
Query: 293 KGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ G+AV S GN+ V D N R+Q F
Sbjct: 64 FGIGGIAVDSAGNVYVTDEHNSRVQKF 90
>gi|332018552|gb|EGI59141.1| Tripartite motif-containing protein 71 [Acromyrmex echinatior]
Length = 1158
Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats.
Identities = 94/328 (28%), Positives = 155/328 (47%), Gaps = 44/328 (13%)
Query: 19 LLVSGIGQVGTT-PRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNH 77
+LV+G G +G P Y + + I + +P PRG + + + + H
Sbjct: 787 ILVNGPGTIGDRLPNRDYKLQSYFPYGINEQMMQP----IPRGRPITDYDHNICLPNRKH 842
Query: 78 RVQVCFPHFDLKTNCVFLAF---------TWPRGIAVGPDNSIVVADSSNHRVQVFQSDG 128
+QV T+ + L + P G+ + +I+++D SN+R+Q+++ DG
Sbjct: 843 ELQV------KSTDIIILGYFGENNPDNLCRPWGLICDNEGNIIISDRSNNRIQIYRDDG 896
Query: 129 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKF 188
T V KFG+ GN Q P IAV R+IV D +NHRVQI + +G F+ F
Sbjct: 897 TLVRKFGTYGNGPCQFNRPAGIAVDARRRLIVVDKDNHRVQILTM-------EGEFLRAF 949
Query: 189 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFP 248
G G K GQ +P +AV++ + V+D+ NHRVQ+F G + FG + L P
Sbjct: 950 GEHGEKQGQFCYPWDVAVNSACEIAVTDTRNHRVQLFSPEGIPLRMFGGQPHLLRYLDSP 1009
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG----------SGDGE------- 291
RG+ +++G + V D N+ + I + +R C +GDG+
Sbjct: 1010 RGICFNNEGKLIVTDFNNHHVLIIDYNMVEMRILKCEKESKGKRQDGETGDGQNEENTPT 1069
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F+ +G+ +G+ILV D ++ I+ F
Sbjct: 1070 FQRPQGIIAADDGSILVADSRHNSIKAF 1097
Score = 111 bits (277), Expect = 5e-22, Method: Composition-based stats.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 38/286 (13%)
Query: 50 SEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTN--CVFLAFTWPR 101
+ P P G+ + +I+++D SN+R+Q+ F N C F P
Sbjct: 860 NNPDNLCRPWGLICDNEGNIIISDRSNNRIQIYRDDGTLVRKFGTYGNGPC---QFNRPA 916
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
GIAV ++V D NHRVQ+ +G F+ FG G K GQ +P +AV++ + V+
Sbjct: 917 GIAVDARRRLIVVDKDNHRVQILTMEGEFLRAFGEHGEKQGQFCYPWDVAVNSACEIAVT 976
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
D+ NHRVQ+ F +G + FG + L+ P I +N ++IV+D NNH
Sbjct: 977 DTRNHRVQL-------FSPEGIPLRMFGGQPHLLRYLDSPRGICFNNEGKLIVTDFNNHH 1029
Query: 222 VQIFDVN---------------GRVITSFGSEGSEEGQLKF--PRGVAVDDQGYISVGDS 264
V I D N R G +EE F P+G+ D G I V DS
Sbjct: 1030 VLIIDYNMVEMRILKCEKESKGKRQDGETGDGQNEENTPTFQRPQGIIAADDGSILVADS 1089
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
+N I+ F G + ++ G E G+A+ +G + D
Sbjct: 1090 RHNSIKAFNSVGSLIYSY---KPGQEEMDRPLGIALHWDGRMAFTD 1132
Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 30/249 (12%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------- 95
K G+ G+ P F P GIAV ++V D NHRVQ+ L FL
Sbjct: 901 KFGTYGNGPCQFNRPAGIAVDARRRLIVVDKDNHRVQI------LTMEGEFLRAFGEHGE 954
Query: 96 ---AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
F +P +AV I V D+ NHRVQ+F +G + FG + L+ P I
Sbjct: 955 KQGQFCYPWDVAVNSACEIAVTDTRNHRVQLFSPEGIPLRMFGGQPHLLRYLDSPRGICF 1014
Query: 153 SNTNRVIVSDSNNHRVQIFDVN---GRVFQSDGTFVGKFGSMGNKAGQ-------LEHPH 202
+N ++IV+D NNH V I D N R+ + + GK GQ + P
Sbjct: 1015 NNEGKLIVTDFNNHHVLIIDYNMVEMRILKCEKESKGKRQDGETGDGQNEENTPTFQRPQ 1074
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
I ++ ++V+DS ++ ++ F+ G +I S+ G EE + P G+A+ G ++
Sbjct: 1075 GIIAADDGSILVADSRHNSIKAFNSVGSLIYSY-KPGQEE--MDRPLGIALHWDGRMAFT 1131
Query: 263 DSGNNRIQI 271
D G N +++
Sbjct: 1132 DYGRNYVRL 1140
>gi|195115226|ref|XP_002002165.1| GI13993 [Drosophila mojavensis]
gi|193912740|gb|EDW11607.1| GI13993 [Drosophila mojavensis]
Length = 1054
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 124/219 (56%), Gaps = 22/219 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 797 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 856
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 857 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 904
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 905 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 960
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
+GQ+LR G G+G GV + SNG IL+ D N
Sbjct: 961 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHN 995
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 772 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 827
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 828 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 884
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 885 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 931
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 932 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGIT----NYPIGVGINSNGE 987
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 988 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1040
Query: 316 IQVF 319
+ ++
Sbjct: 1041 LYIY 1044
>gi|225581055|gb|ACN94632.1| GA10519 [Drosophila miranda]
Length = 1070
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 124/219 (56%), Gaps = 22/219 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 813 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 872
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 873 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 920
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 921 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 976
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
+GQ+LR G G+G GV + SNG IL+ D N
Sbjct: 977 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHN 1011
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 788 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 843
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 844 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 900
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 901 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 947
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 948 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGIT----NYPIGVGINSNGE 1003
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 1004 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1056
Query: 316 IQVF 319
+ ++
Sbjct: 1057 LYIY 1060
>gi|198473408|ref|XP_001356284.2| GA10519 [Drosophila pseudoobscura pseudoobscura]
gi|198139443|gb|EAL33347.2| GA10519 [Drosophila pseudoobscura pseudoobscura]
Length = 1063
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 124/219 (56%), Gaps = 22/219 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 806 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 865
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 866 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 913
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 914 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 969
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
+GQ+LR G G+G GV + SNG IL+ D N
Sbjct: 970 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHN 1004
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 781 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 836
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 837 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 893
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 894 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 940
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 941 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGIT----NYPIGVGINSNGE 996
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 997 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1049
Query: 316 IQVF 319
+ ++
Sbjct: 1050 LYIY 1053
>gi|195398065|ref|XP_002057645.1| GJ18246 [Drosophila virilis]
gi|194141299|gb|EDW57718.1| GJ18246 [Drosophila virilis]
Length = 1046
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 124/219 (56%), Gaps = 22/219 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 789 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 848
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 849 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 896
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 897 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 952
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
+GQ+LR G G+G GV + SNG IL+ D N
Sbjct: 953 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHN 987
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 764 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 819
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 820 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 876
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 877 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 923
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 924 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGIT----NYPIGVGINSNGE 979
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 980 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1032
Query: 316 IQVF 319
+ ++
Sbjct: 1033 LYIY 1036
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 111/213 (52%), Gaps = 18/213 (8%)
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
N ++ A + Q+ + + KFG G GQ P +AV+ N +IV+D+NNHR+
Sbjct: 754 NKLLSASIYPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRI 813
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNTNRVIVSD-SNNHRVQIFD 226
QIFD GR F +FG G + QL +P+ +A V N+ +IV++ S H++QI++
Sbjct: 814 QIFDKEGR-------FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 866
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
G+ + FG+ L+ PRGV VD++G I V + R+ IF +G L FGC
Sbjct: 867 QYGQFVRKFGAT-----ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGC-- 919
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
S EF GV V I + D H ++VF
Sbjct: 920 SKHLEFPN--GVVVNDKQEIFISDNRAHCVKVF 950
>gi|195432878|ref|XP_002064443.1| GK23851 [Drosophila willistoni]
gi|194160528|gb|EDW75429.1| GK23851 [Drosophila willistoni]
Length = 1100
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 843 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 902
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 903 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 950
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 951 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 1006
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G+G GV + SNG IL+ D N+
Sbjct: 1007 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHNN 1042
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 818 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 873
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 874 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 930
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 931 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 977
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 978 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGIT----NYPIGVGINSNGE 1033
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 1034 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1086
Query: 316 IQVF 319
+ ++
Sbjct: 1087 LYIY 1090
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 111/213 (52%), Gaps = 18/213 (8%)
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
N ++ A + Q+ + + KFG G GQ P +AV+ N +IV+D+NNHR+
Sbjct: 808 NKLLSASIYPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRI 867
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNTNRVIVSD-SNNHRVQIFD 226
QIFD GR F +FG G + QL +P+ +A V N+ +IV++ S H++QI++
Sbjct: 868 QIFDKEGR-------FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 920
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
G+ + FG+ L+ PRGV VD++G I V + R+ IF +G L FGC
Sbjct: 921 QYGQFVRKFGAT-----ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGC-- 973
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
S EF GV V I + D H ++VF
Sbjct: 974 SKHLEFPN--GVVVNDKQEIFISDNRAHCVKVF 1004
>gi|195164596|ref|XP_002023132.1| GL21191 [Drosophila persimilis]
gi|194105217|gb|EDW27260.1| GL21191 [Drosophila persimilis]
Length = 1062
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 124/219 (56%), Gaps = 22/219 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 805 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 864
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 865 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 912
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 913 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 968
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
+GQ+LR G G+G GV + SNG IL+ D N
Sbjct: 969 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHN 1003
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 780 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 835
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 836 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 892
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 893 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 939
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 940 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGIT----NYPIGVGINSNGE 995
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 996 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1048
Query: 316 IQVF 319
+ ++
Sbjct: 1049 LYIY 1052
>gi|77455326|gb|ABA86472.1| CG10719 [Drosophila melanogaster]
Length = 1024
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 773 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 832
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 833 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 880
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 881 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 936
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G+G GV + SNG IL+ D N+
Sbjct: 937 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHNN 972
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 748 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 803
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 804 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 860
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 861 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 907
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 908 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGI----TNYPIGVGINSNGE 963
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 964 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1016
Query: 316 IQVF 319
+ ++
Sbjct: 1017 LYIY 1020
>gi|17136846|ref|NP_476945.1| brain tumor, isoform A [Drosophila melanogaster]
gi|19549884|ref|NP_599129.1| brain tumor, isoform B [Drosophila melanogaster]
gi|45552407|ref|NP_995726.1| brain tumor, isoform C [Drosophila melanogaster]
gi|41688503|sp|Q8MQJ9.2|BRAT_DROME RecName: Full=Brain tumor protein
gi|6062977|gb|AAF03086.1|AF119332_1 brain tumor [Drosophila melanogaster]
gi|5360599|dbj|BAA82071.1| transcription factor [Drosophila melanogaster]
gi|7298552|gb|AAF53771.1| brain tumor, isoform B [Drosophila melanogaster]
gi|22946809|gb|AAN11027.1| brain tumor, isoform A [Drosophila melanogaster]
gi|45445160|gb|AAS64719.1| brain tumor, isoform C [Drosophila melanogaster]
gi|220952752|gb|ACL88919.1| brat-PA [synthetic construct]
gi|323301252|gb|ADX35968.1| LD28374p [Drosophila melanogaster]
Length = 1037
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 780 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 839
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 840 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 887
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 888 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 943
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G+G GV + SNG IL+ D N+
Sbjct: 944 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHNN 979
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 755 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 810
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 811 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 867
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 868 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 914
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 915 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGIT----NYPIGVGINSNGE 970
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 971 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1023
Query: 316 IQVF 319
+ ++
Sbjct: 1024 LYIY 1027
>gi|442628325|ref|NP_001188842.2| brain tumor, isoform E [Drosophila melanogaster]
gi|440213921|gb|ADV37091.2| brain tumor, isoform E [Drosophila melanogaster]
Length = 1061
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 780 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 839
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 840 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 887
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 888 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 943
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G+G GV + SNG IL+ D N+
Sbjct: 944 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHNN 979
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 755 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 810
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 811 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 867
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 868 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 914
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 915 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGIT----NYPIGVGINSNGE 970
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 971 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1023
Query: 316 IQVF 319
+ ++
Sbjct: 1024 LYIY 1027
>gi|194759328|ref|XP_001961901.1| GF14706 [Drosophila ananassae]
gi|190615598|gb|EDV31122.1| GF14706 [Drosophila ananassae]
Length = 1046
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 124/219 (56%), Gaps = 22/219 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 789 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 848
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 849 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 896
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 897 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 952
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
+GQ+LR G G+G GV + SNG IL+ D N
Sbjct: 953 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHN 987
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 764 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 819
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 820 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 876
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 877 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 923
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 924 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGIT----NYPIGVGINSNGE 979
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 980 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1032
Query: 316 IQVF 319
+ ++
Sbjct: 1033 LYIY 1036
>gi|194879699|ref|XP_001974283.1| GG21163 [Drosophila erecta]
gi|190657470|gb|EDV54683.1| GG21163 [Drosophila erecta]
Length = 1136
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 879 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 938
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 939 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 986
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 987 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 1042
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G+G GV + SNG IL+ D N+
Sbjct: 1043 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHNN 1078
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 854 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 909
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 910 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 966
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 967 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 1013
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 1014 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGI----TNYPIGVGINSNGE 1069
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 1070 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1122
Query: 316 IQVF 319
+ ++
Sbjct: 1123 LYIY 1126
>gi|77455328|gb|ABA86473.1| CG10719 [Drosophila simulans]
Length = 1025
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 774 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 833
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 834 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 881
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 882 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 937
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G+G GV + SNG IL+ D N+
Sbjct: 938 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHNN 973
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 749 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 804
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 805 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 861
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 862 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 908
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 909 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGI----TNYPIGVGINSNGE 964
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 965 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1017
Query: 316 IQVF 319
+ ++
Sbjct: 1018 LYIY 1021
>gi|77455336|gb|ABA86477.1| CG10719 [Drosophila erecta]
Length = 1029
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 778 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 837
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 838 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 885
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 886 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 941
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G+G GV + SNG IL+ D N+
Sbjct: 942 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHNN 977
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 753 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 808
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 809 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 865
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 866 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 912
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 913 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGI----TNYPIGVGINSNGE 968
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 969 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1021
Query: 316 IQVF 319
+ ++
Sbjct: 1022 LYIY 1025
>gi|195345041|ref|XP_002039084.1| GM17330 [Drosophila sechellia]
gi|194134214|gb|EDW55730.1| GM17330 [Drosophila sechellia]
Length = 1034
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 777 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 836
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 837 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 884
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 885 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 940
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G+G GV + SNG IL+ D N+
Sbjct: 941 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHNN 976
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 752 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 807
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 808 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 864
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 865 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 911
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 912 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGI----TNYPIGVGINSNGE 967
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 968 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1020
Query: 316 IQVF 319
+ ++
Sbjct: 1021 LYIY 1024
>gi|77455330|gb|ABA86474.1| CG10719 [Drosophila simulans]
Length = 1025
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 774 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 833
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 834 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 881
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 882 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 937
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G+G GV + SNG IL+ D N+
Sbjct: 938 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHNN 973
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 749 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 804
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 805 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 861
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 862 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 908
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 909 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGI----TNYPIGVGINSNGE 964
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 965 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1017
Query: 316 IQVF 319
+ ++
Sbjct: 1018 LYIY 1021
>gi|21744249|gb|AAM76183.1| LD16270p [Drosophila melanogaster]
Length = 1095
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 838 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 897
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 898 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 945
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 946 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 1001
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G+G GV + SNG IL+ D N+
Sbjct: 1002 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHNN 1037
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 813 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 868
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 869 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 925
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 926 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 972
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 973 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGI----TNYPIGVGINSNGE 1028
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 1029 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1081
Query: 316 IQVF 319
+ ++
Sbjct: 1082 LYIY 1085
>gi|340383800|ref|XP_003390404.1| PREDICTED: hypothetical protein LOC100634336, partial [Amphimedon
queenslandica]
Length = 1442
Score = 134 bits (337), Expect = 6e-29, Method: Composition-based stats.
Identities = 83/226 (36%), Positives = 117/226 (51%), Gaps = 16/226 (7%)
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F + G+AV N V A S++ VQVF +D T V + GS GN GQL P + +
Sbjct: 1108 FTVENYTTGVAVH-TNGEVFASSTDGFVQVFSADSTAVRRIGSKGNGNGQLRCPWGLLLL 1166
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+R+ V D N HRVQ F + G ++G+FGS GN GQ +P ++ ++
Sbjct: 1167 G-DRLYVFDVNLHRVQYFSA------TTGQYIGQFGSEGNGNGQFSYPRGMSTDGKGNIL 1219
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
V+D N RVQ+F +G + FGS+GS GQ P G++ D +G I V D N R+Q+F
Sbjct: 1220 VADDGNKRVQVFKEDGTFL-QFGSKGSGNGQFSNPEGMSTDGKGNILVADYNNKRVQVFK 1278
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
DG F++ C G VAV + G I V + H +QVF
Sbjct: 1279 EDGTFVQVIQCDGKA-------SDVAVGNEGKIHVTICDQHHVQVF 1317
Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats.
Identities = 68/201 (33%), Positives = 105/201 (52%), Gaps = 21/201 (10%)
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
N V A+S + VQVF DGT V + GS G+ GQ ++P + + +R+ VSD+N +RV
Sbjct: 479 NGEVFANSKDGFVQVFSEDGTAVRRIGSKGSGNGQFDYPWGLLLVG-DRLYVSDNNFNRV 537
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
Q F + G ++ +FGS GN GQ P I+ + ++V++ NN RVQ+F +
Sbjct: 538 QYFSA------TTGQYISQFGSEGNGNGQFYTPRGISTDGKSNILVAEYNNKRVQVFKED 591
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF-LRAFGCWGS 287
G + +G VAVD++G I V S N +Q+F+PDG+ L A+
Sbjct: 592 GTFVQVIQCDGKAT-------DVAVDNEGKIHVTISNQNHVQVFSPDGKSQLDAY----- 639
Query: 288 GDGEFKGLEGVAVMSNGNILV 308
+ F +G+A+ G I V
Sbjct: 640 -NHNFNSPQGIAIDDEGCIFV 659
Score = 102 bits (253), Expect = 3e-19, Method: Composition-based stats.
Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 32/193 (16%)
Query: 109 NSIVVADSSNHRVQVFQ-SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 167
+ + V D + HRVQ F + G ++G+FGS GN GQ +P ++ ++V+D N R
Sbjct: 1168 DRLYVFDVNLHRVQYFSATTGQYIGQFGSEGNGNGQFSYPRGMSTDGKGNILVADDGNKR 1227
Query: 168 VQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 227
VQ VF+ DGTF+ +FGS G+ GQ +P ++ ++V+D NN RVQ+F
Sbjct: 1228 VQ-------VFKEDGTFL-QFGSKGSGNGQFSNPEGMSTDGKGNILVADYNNKRVQVFKE 1279
Query: 228 NGRVI-----------TSFGSEG--------SEEGQLKFPRGVAVDDQGYISVG----DS 264
+G + + G+EG Q+ P VA+DD+GYI V
Sbjct: 1280 DGTFVQVIQCDGKASDVAVGNEGKIHVTICDQHHVQVFSPDAVAIDDEGYIFVSVYYRYV 1339
Query: 265 GNNRIQIFTPDGQ 277
G++ + + PDG+
Sbjct: 1340 GDSYLHVLNPDGK 1352
Score = 93.2 bits (230), Expect = 1e-16, Method: Composition-based stats.
Identities = 59/167 (35%), Positives = 88/167 (52%), Gaps = 16/167 (9%)
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+TN + ++S + VQ VF DGT V + GS G+ GQ ++P + + +R+
Sbjct: 477 HTNGEVFANSKDGFVQ-------VFSEDGTAVRRIGSKGSGNGQFDYPWGLLLVG-DRLY 528
Query: 214 VSDSNNHRVQIFD-VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
VSD+N +RVQ F G+ I+ FGSEG+ GQ PRG++ D + I V + N R+Q+F
Sbjct: 529 VSDNNFNRVQYFSATTGQYISQFGSEGNGNGQFYTPRGISTDGKSNILVAEYNNKRVQVF 588
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
DG F++ C G VAV + G I V + +QVF
Sbjct: 589 KEDGTFVQVIQCDGKA-------TDVAVDNEGKIHVTISNQNHVQVF 628
Score = 84.0 bits (206), Expect = 9e-14, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 22/180 (12%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQ-SDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F +P G+ + D + V+D++ +RVQ F + G ++ +FGS GN GQ P I+
Sbjct: 514 FDYPWGLLLVGDR-LYVSDNNFNRVQYFSATTGQYISQFGSEGNGNGQFYTPRGISTDGK 572
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+ ++V++ NN RVQ VF+ DGTFV G +AV N ++ V+
Sbjct: 573 SNILVAEYNNKRVQ-------VFKEDGTFVQVIQCDGKATD-------VAVDNEGKIHVT 618
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
SN + VQ+F +G+ + P+G+A+DD+G I V S N + + +PD
Sbjct: 619 ISNQNHVQVFSPDGK-----SQLDAYNHNFNSPQGIAIDDEGCIFV-SSNNGYLHVLSPD 672
Score = 77.4 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 52/163 (31%), Positives = 78/163 (47%), Gaps = 25/163 (15%)
Query: 32 RSQYLQKRRLQF--KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
R QY Q+ + GS G+ G F++PRG++ +I+VAD N RVQV K
Sbjct: 1179 RVQYFSATTGQYIGQFGSEGNGNGQFSYPRGMSTDGKGNILVADDGNKRVQV------FK 1232
Query: 90 TNCVFL----------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGN 139
+ FL F+ P G++ +I+VAD +N RVQVF+ DGTFV G
Sbjct: 1233 EDGTFLQFGSKGSGNGQFSNPEGMSTDGKGNILVADYNNKRVQVFKEDGTFVQVIQCDGK 1292
Query: 140 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDG 182
+ +AV N ++ V+ + H VQ+F + +G
Sbjct: 1293 ASD-------VAVGNEGKIHVTICDQHHVQVFSPDAVAIDDEG 1328
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 34/187 (18%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT----- 98
+IGS+GS G F +P G+ + D + V+D++ +RVQ +F T F
Sbjct: 503 RIGSKGSGNGQFDYPWGLLLVGDR-LYVSDNNFNRVQ----YFSATTGQYISQFGSEGNG 557
Query: 99 -----WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
PRGI+ ++I+VA+ +N RVQVF+ DGTFV G +AV
Sbjct: 558 NGQFYTPRGISTDGKSNILVAEYNNKRVQVFKEDGTFVQVIQCDGKATD-------VAVD 610
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
N ++ V+ SN + VQ+F +G+ Q D + F S P IA+ + +
Sbjct: 611 NEGKIHVTISNQNHVQVFSPDGKS-QLDA-YNHNFNS----------PQGIAIDDEGCIF 658
Query: 214 VSDSNNH 220
VS +N +
Sbjct: 659 VSSNNGY 665
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 32 RSQYLQKRRLQF--KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
R QY Q+ + GS G+ G F PRGI+ ++I+VA+ +N RVQV K
Sbjct: 536 RVQYFSATTGQYISQFGSEGNGNGQFYTPRGISTDGKSNILVAEYNNKRVQV------FK 589
Query: 90 TNCVFLAFTWPRG----IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE 145
+ F+ G +AV + I V S+ + VQVF DG +
Sbjct: 590 EDGTFVQVIQCDGKATDVAVDNEGKIHVTISNQNHVQVFSPDGK-----SQLDAYNHNFN 644
Query: 146 HPHYIAVSNTNRVIVSDSNNH 166
P IA+ + + VS +N +
Sbjct: 645 SPQGIAIDDEGCIFVSSNNGY 665
>gi|195484393|ref|XP_002090675.1| GE13236 [Drosophila yakuba]
gi|194176776|gb|EDW90387.1| GE13236 [Drosophila yakuba]
Length = 1035
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 778 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 837
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 838 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 885
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 886 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 941
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G+G GV + SNG IL+ D N+
Sbjct: 942 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHNN 977
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 753 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 808
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 809 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 865
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 866 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 912
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 913 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGI----TNYPIGVGINSNGE 968
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 969 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1021
Query: 316 IQVF 319
+ ++
Sbjct: 1022 LYIY 1025
>gi|391328850|ref|XP_003738896.1| PREDICTED: B-box type zinc finger protein ncl-1-like [Metaseiulus
occidentalis]
Length = 953
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 127/226 (56%), Gaps = 23/226 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ ++V T+
Sbjct: 698 FTEPSGVAVNAQNDIIVADTNNHRIQIFNKEGHFKFQFGECGKRDGQLLYPNRVSVVKTS 757
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++Q+++ G+ FV KFG A L+HP I V N R+IV
Sbjct: 758 GDIIVTERSPTHQIQVYNQYGQ-------FVRKFG-----ANILQHPRGITVDNKGRIIV 805
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+T FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 806 VECKVMRVLIFDQNGNVLTKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 861
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH-RIQVF 319
+G FLR G G+G GV + G ILV D N+ I +F
Sbjct: 862 EGVFLRKIG----GEGITNYPIGVCINQQGEILVADNHNNFNITIF 903
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 157/316 (49%), Gaps = 47/316 (14%)
Query: 20 LVSGIGQVGTTPRSQYLQKRRLQF--KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNH 77
L S Q P L+++++ + K G G G FT P G+AV N I+VAD++NH
Sbjct: 661 LSSKFVQSPAYPLKSQLKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNH 720
Query: 78 RVQVCFPHFDLKTNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQS 126
R+Q+ F+ + + F +P ++V + IV S H++QV+
Sbjct: 721 RIQI----FNKEGHFKFQFGECGKRDGQLLYPNRVSVVKTSGDIIVTERSPTHQIQVYNQ 776
Query: 127 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVG 186
G FV KFG A L+HP I V N R+IV + RV IFD NG V +
Sbjct: 777 YGQFVRKFG-----ANILQHPRGITVDNKGRIIVVECKVMRVLIFDQNGNV-------LT 824
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
KFG + LE P+ + V++ + +SD+ H V++F+ G + G EG
Sbjct: 825 KFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGVFLRKIGGEGIT----N 876
Query: 247 FPRGVAVDDQGYISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSN 303
+P GV ++ QG I V D+ NN I IFT DGQ + A + + K + VA+M++
Sbjct: 877 YPIGVCINQQGEILVADNHNNFNITIFTQDGQLVNAL------ESKVKHAQCFDVALMND 930
Query: 304 GNILVCDRENHRIQVF 319
G++++ ++ +R+ ++
Sbjct: 931 GSVVLASKD-YRLYIY 945
>gi|158286294|ref|XP_308663.4| AGAP007095-PA [Anopheles gambiae str. PEST]
gi|157020399|gb|EAA04531.4| AGAP007095-PA [Anopheles gambiae str. PEST]
Length = 589
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 122/237 (51%), Gaps = 20/237 (8%)
Query: 97 FTWPRGIAVGPD-NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
++P+GI P+ + V+D H + VF +G + K + G++AGQL P IA
Sbjct: 358 LSYPQGITFDPERKELFVSDKWKHCIFVFSQEGQLLRKLCTKGDQAGQLRSPEGIAFCTG 417
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN----KAGQ---------LEHPH 202
+ + V D+ N R+Q +DG +FG + KA Q L++P
Sbjct: 418 DCLFVCDTGNDRIQCLST------TDGKAHAQFGRLTKDQLIKASQTKISSRMVDLKNPT 471
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
IAV V+V D+ N RV++F+ G + FG G+ GQ ++P + VD G+I VG
Sbjct: 472 DIAVQKNASVLVLDAGNRRVKLFNKYGEQLLEFGQTGTINGQFQYPEVIGVDPAGFILVG 531
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D GN +I ++ P+GQF+ A G G G+F + G+ V + I++ D +NH +Q+
Sbjct: 532 DGGNAKILVYRPNGQFVTALGSRGDSAGKFNWISGLCVSKDWEIVISDYKNHAVQLI 588
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 103/239 (43%), Gaps = 27/239 (11%)
Query: 55 FTWPRGIAVGPD-NSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWPRGIAVGPD 108
++P+GI P+ + V+D H + V L P GIA
Sbjct: 358 LSYPQGITFDPERKELFVSDKWKHCIFVFSQEGQLLRKLCTKGDQAGQLRSPEGIAFCTG 417
Query: 109 NSIVVADSSNHRVQVFQS-DGTFVGKFGSMGN----KAGQ---------LEHPHYIAVSN 154
+ + V D+ N R+Q + DG +FG + KA Q L++P IAV
Sbjct: 418 DCLFVCDTGNDRIQCLSTTDGKAHAQFGRLTKDQLIKASQTKISSRMVDLKNPTDIAVQK 477
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
V+V D+ N RV++F+ G +FG G GQ ++P I V ++V
Sbjct: 478 NASVLVLDAGNRRVKLFNKYGEQLL-------EFGQTGTINGQFQYPEVIGVDPAGFILV 530
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
D N ++ ++ NG+ +T+ GS G G+ + G+ V I + D N+ +Q+ +
Sbjct: 531 GDGGNAKILVYRPNGQFVTALGSRGDSAGKFNWISGLCVSKDWEIVISDYKNHAVQLIS 589
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV 81
+GSRG G F W G+ V D IV++D NH VQ+
Sbjct: 551 LGSRGDSAGKFNWISGLCVSKDWEIVISDYKNHAVQL 587
>gi|77455332|gb|ABA86475.1| CG10719 [Drosophila yakuba]
gi|77455334|gb|ABA86476.1| CG10719 [Drosophila yakuba]
Length = 1022
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 771 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 830
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 831 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 878
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 879 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 934
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G+G GV + SNG IL+ D N+
Sbjct: 935 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHNN 970
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 746 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 801
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 802 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 858
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 859 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 905
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 906 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGI----TNYPIGVGINSNGE 961
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 962 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1014
Query: 316 IQVF 319
+ ++
Sbjct: 1015 LYIY 1018
>gi|260827945|ref|XP_002608924.1| hypothetical protein BRAFLDRAFT_85511 [Branchiostoma floridae]
gi|229294278|gb|EEN64934.1| hypothetical protein BRAFLDRAFT_85511 [Branchiostoma floridae]
Length = 1459
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 148/280 (52%), Gaps = 19/280 (6%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
RL + G RGS G F P +AV + +VV D +N R+Q+ +K+ F A ++
Sbjct: 1197 RLLHQFGRRGSGDGEFNGPYRVAVTAEGHVVVGDRNNRRIQIFDTEGRMKSK--FPAGSY 1254
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
+ +AV D ++ V DS + +++ DG+ + +F K IAV R+I
Sbjct: 1255 SK-VAVMHDGNLAVTDSEGN-IRLCAQDGSVIHEF-----KPPVTSCYSGIAVDKLGRII 1307
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ NH V IF + DGT + +FG+ G+ + + P Y+ V++ + +IVSD+ N
Sbjct: 1308 VTDAINHSVCIF-------EPDGTQIHQFGTKGSADDEFKAPSYVTVNSKSHIIVSDTRN 1360
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
H ++IFD +G+ + GS G+ +G +P GV VD + I V D GN R+++F D +FL
Sbjct: 1361 HCIKIFDQDGKFLNKLGSLGTGDGHFDYPAGVCVDSKDNIIVSDYGNKRVELFQNDLKFL 1420
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
R G E VAV +G +++ D + I++F
Sbjct: 1421 RHIASVEDG---LLHPEAVAVTPDGFLVLTDTGTNDIKIF 1457
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 228 NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGS 287
+ R++ FG GS +G+ P VAV +G++ VGD N RIQIF +G+ F
Sbjct: 1195 SARLLHQFGRRGSGDGEFNGPYRVAVTAEGHVVVGDRNNRRIQIFDTEGRMKSKFPA--- 1251
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRE 312
G + VAVM +GN+ V D E
Sbjct: 1252 --GSY---SKVAVMHDGNLAVTDSE 1271
>gi|170035310|ref|XP_001845513.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877254|gb|EDS40637.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 83
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/71 (88%), Positives = 65/71 (91%)
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
RGVAVDDQGYI V DSGNNRIQIF PDG FLRAFG WGSGD EFKGLEGVA+MSNGNILV
Sbjct: 13 RGVAVDDQGYICVADSGNNRIQIFHPDGSFLRAFGSWGSGDAEFKGLEGVAIMSNGNILV 72
Query: 309 CDRENHRIQVF 319
CDRENHR+QVF
Sbjct: 73 CDRENHRVQVF 83
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
RG+AV I VADS N+R+Q+F DG+F+ FGS G+ + + +A+ + ++V
Sbjct: 13 RGVAVDDQGYICVADSGNNRIQIFHPDGSFLRAFGSWGSGDAEFKGLEGVAIMSNGNILV 72
Query: 161 SDSNNHRVQIF 171
D NHRVQ+F
Sbjct: 73 CDRENHRVQVF 83
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
+AV + + V+DS N+R+QIF +G + +FGS GS + + K GVA+ G I V D
Sbjct: 15 VAVDDQGYICVADSGNNRIQIFHPDGSFLRAFGSWGSGDAEFKGLEGVAIMSNGNILVCD 74
Query: 264 SGNNRIQIF 272
N+R+Q+F
Sbjct: 75 RENHRVQVF 83
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
+AV + + V+DS N+R+QIF DG+F+ FGS G+ + + +A+ +
Sbjct: 15 VAVDDQGYICVADSGNNRIQIF-------HPDGSFLRAFGSWGSGDAEFKGLEGVAIMSN 67
Query: 210 NRVIVSDSNNHRVQIF 225
++V D NHRVQ+F
Sbjct: 68 GNILVCDRENHRVQVF 83
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 15/76 (19%)
Query: 59 RGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF-TW---------PRGIAVGPD 108
RG+AV I VADS N+R+Q+ P AF +W G+A+ +
Sbjct: 13 RGVAVDDQGYICVADSGNNRIQIFHP-----DGSFLRAFGSWGSGDAEFKGLEGVAIMSN 67
Query: 109 NSIVVADSSNHRVQVF 124
+I+V D NHRVQVF
Sbjct: 68 GNILVCDRENHRVQVF 83
>gi|195050007|ref|XP_001992808.1| GH13439 [Drosophila grimshawi]
gi|193899867|gb|EDV98733.1| GH13439 [Drosophila grimshawi]
Length = 1101
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 124/219 (56%), Gaps = 22/219 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 844 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 903
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 904 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 951
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 952 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 1007
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
+GQ+LR G G+G GV + +NG IL+ D N
Sbjct: 1008 EGQYLRQIG----GEGITNYPIGVGINANGEILIADNHN 1042
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 819 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 874
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 875 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 931
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 932 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 978
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 979 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGIT----NYPIGVGINANGE 1034
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 1035 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1087
Query: 316 IQVF 319
+ ++
Sbjct: 1088 LYIY 1091
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 111/213 (52%), Gaps = 18/213 (8%)
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
N ++ A + Q+ + + KFG G GQ P +AV+ N +IV+D+NNHR+
Sbjct: 809 NKLLSASIYPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRI 868
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNTNRVIVSD-SNNHRVQIFD 226
QIFD GR F +FG G + QL +P+ +A V N+ +IV++ S H++QI++
Sbjct: 869 QIFDKEGR-------FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 921
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
G+ + FG+ L+ PRGV VD++G I V + R+ IF +G L FGC
Sbjct: 922 QYGQFVRKFGAT-----ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGC-- 974
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
S EF GV V I + D H ++VF
Sbjct: 975 SKHLEFPN--GVVVNDKQEIFISDNRAHCVKVF 1005
>gi|260785752|ref|XP_002587924.1| hypothetical protein BRAFLDRAFT_87312 [Branchiostoma floridae]
gi|229273079|gb|EEN43935.1| hypothetical protein BRAFLDRAFT_87312 [Branchiostoma floridae]
Length = 724
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 138/279 (49%), Gaps = 32/279 (11%)
Query: 38 KRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTN 91
K++ + G GSEPG F PRG+ V P N I V D N RVQV HF
Sbjct: 453 KKQGEITFGGEGSEPGKFRLPRGVVVSPSNEIFVTDMGNRRVQVHSTEGVYLRHFPAVVP 512
Query: 92 CVFLAFTWPRGIAVGPDNSI------VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE 145
+ PR + + + ++ V+AD H VQ + +DGT + F +++
Sbjct: 513 GIGDNTIQPRDVCMDGNGTLWVVGHEVIAD---HVVQ-YSTDGTAMAGF-----DLKKID 563
Query: 146 HPHYIAVS-NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYI 204
+ IAV TN ++V+D + VQ VF+ DG+ V ++ + G++ HP Y+
Sbjct: 564 YDRGIAVDMRTNHILVTDPDQGEVQ-------VFRPDGSLVR---TVRHPRGEMRHPRYV 613
Query: 205 AVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDS 264
V ++VSD H V ++D +G+ + FG GS EGQL +P G+ D G+I V DS
Sbjct: 614 TVDGEGNILVSDWGTHCVYVYDESGKFLFQFGGRGSSEGQLTYPGGICTDSSGHILVADS 673
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
GN R+QIFT G+F+R + G EG V+ N
Sbjct: 674 GNERVQIFTRHGEFVRTVRTGSDPESLAVGPEGQLVVIN 712
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 111/228 (48%), Gaps = 21/228 (9%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ-LEHPHYIAVSNT 155
F PRG+ V P N I V D N RVQV ++G ++ F ++ G P + +
Sbjct: 470 FRLPRGVVVSPSNEIFVTDMGNRRVQVHSTEGVYLRHFPAVVPGIGDNTIQPRDVCMDGN 529
Query: 156 NRVIVSDSN---NHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNR 211
+ V +H VQ + +DGT + F ++++ IAV TN
Sbjct: 530 GTLWVVGHEVIADHVVQ--------YSTDGTAMAGF-----DLKKIDYDRGIAVDMRTNH 576
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D + VQ+F +G ++ + G+++ PR V VD +G I V D G + + +
Sbjct: 577 ILVTDPDQGEVQVFRPDGSLVRTVRHP---RGEMRHPRYVTVDGEGNILVSDWGTHCVYV 633
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ G+FL FG GS +G+ G+ S+G+ILV D N R+Q+F
Sbjct: 634 YDESGKFLFQFGGRGSSEGQLTYPGGICTDSSGHILVADSGNERVQIF 681
>gi|260828349|ref|XP_002609126.1| hypothetical protein BRAFLDRAFT_126146 [Branchiostoma floridae]
gi|229294480|gb|EEN65136.1| hypothetical protein BRAFLDRAFT_126146 [Branchiostoma floridae]
Length = 490
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 148/286 (51%), Gaps = 22/286 (7%)
Query: 38 KRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF 97
+ RL + G +G + G F P G+ V D VVADS + R+QV FD +
Sbjct: 220 RARLMLEFGGKGDDDGHFMAPAGVQVTKDGDFVVADSDSRRLQV----FDSSGKFKYKIK 275
Query: 98 T--WPRGIAVGPDNSIVVADS--SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
T +PR +A+ DN +V+ + +VQ+ G+F+G+FG+ AGQ E+ + + V
Sbjct: 276 TSMYPRNVAITQDNIFIVSGNLHGEGKVQMLTPTGSFLGEFGT----AGQFEYAYGLVVD 331
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
R++V+D + HRV I +GR + +FG GN+ P+ +A++ N ++
Sbjct: 332 KNGRIVVTDVHKHRVSIHLPDGR-------LIHQFGVFGNEDHHFNKPYNVAINAKNNIL 384
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
VSD +N V++FD G I G +G+++ L FP G+ VD I V DS + +++F
Sbjct: 385 VSDKHNQCVKMFDSRGTFIKKVGRDGTKDNNLVFPYGLCVDATDDIIVADSTPHPVKLFD 444
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G+F R + D +G + + G ++V +R+ ++V+
Sbjct: 445 CEGKF-REYLII--SDEPQQGPRALCITPEGRLVVSERDKQVVRVY 487
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 16/148 (10%)
Query: 33 SQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC 92
S +L RL + G G+E F P +A+ N+I+V+D N C FD +
Sbjct: 347 SIHLPDGRLIHQFGVFGNEDHHFNKPYNVAINAKNNILVSDKHNQ----CVKMFDSRGTF 402
Query: 93 VFLA---------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
+ +P G+ V + I+VADS+ H V++F +G F ++ + ++ Q
Sbjct: 403 IKKVGRDGTKDNNLVFPYGLCVDATDDIIVADSTPHPVKLFDCEGKF-REYLIISDEPQQ 461
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
P + ++ R++VS+ + V+++
Sbjct: 462 --GPRALCITPEGRLVVSERDKQVVRVY 487
>gi|156386715|ref|XP_001634057.1| predicted protein [Nematostella vectensis]
gi|156221135|gb|EDO41994.1| predicted protein [Nematostella vectensis]
Length = 549
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 36/311 (11%)
Query: 24 IGQVGTTPRS-----QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHR 78
IGQV ++ S + + ++ KIG +GS G F P G+A I V+D N R
Sbjct: 257 IGQVVSSASSADILPDWSKAGKVIHKIGHKGSRKGNFKSPGGVASNEFGEIAVSDFFNDR 316
Query: 79 VQVCFPHFDLKTNCVFL---------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGT 129
+QV FD K +F F P G+A ++ I+V DS NHR+Q+F G
Sbjct: 317 IQV----FDSKGKFLFQFGKKGTKDGLFQGPTGVAYTVNSEIMVLDSRNHRIQIFNRKGE 372
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
F+ KFG G+ G+L + V N++IV+D+ ++RVQ VF +DG+F +G
Sbjct: 373 FLSKFGQRGSNTGELGWAEGLYVDGENKIIVTDTEHNRVQ-------VFHADGSFKFMYG 425
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
G + + P V + +DS N +++F+ +G + FG EG+ G+ PR
Sbjct: 426 DTGTEG--FDKP-LNTVCHNGEYFTTDSGNFCIKVFNSDGEYVRQFGREGAGGGEFCCPR 482
Query: 250 GVAVDDQG-YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
G+A+D + + V DSGN+ I +F DG F+ K G+A+M+ +++V
Sbjct: 483 GLALDKKNELLLVCDSGNDSIHVFRLDGSFVTQLSTK-------KTPVGLALMNGRHLVV 535
Query: 309 CDRENHRIQVF 319
H +QV
Sbjct: 536 SSYYGHCVQVL 546
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FGS+ K GQ V+ S S+ + + G+VI G +GS +G K
Sbjct: 250 FGSLNKKIGQ--------------VVSSASSADILPDWSKAGKVIHKIGHKGSRKGNFKS 295
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P GVA ++ G I+V D N+RIQ+F G+FL FG G+ DG F+G GVA N I+
Sbjct: 296 PGGVASNEFGEIAVSDFFNDRIQVFDSKGKFLFQFGKKGTKDGLFQGPTGVAYTVNSEIM 355
Query: 308 VCDRENHRIQVF 319
V D NHRIQ+F
Sbjct: 356 VLDSRNHRIQIF 367
>gi|161527985|ref|YP_001581811.1| NHL repeat-containing protein [Nitrosopumilus maritimus SCM1]
gi|160339286|gb|ABX12373.1| NHL repeat containing protein [Nitrosopumilus maritimus SCM1]
Length = 525
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 122/217 (56%), Gaps = 11/217 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+ IAV + + ++D N RVQ F S G F+ FG G +GQ HP +AV +++ V
Sbjct: 50 PQFIAVDDEGNAYISDLGNKRVQKFSSSGEFILNFGESGKSSGQFHHPSGVAV-DSDFVY 108
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D N H++Q F + DG FV ++G GN+ GQ + P IAV +++ + V D++N
Sbjct: 109 VADQNLHKIQKFTL-------DGVFVDEWGKYGNQDGQFKSPKDIAV-DSDFLYVVDADN 160
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
+R+Q F +G + SFGS G Q G+AVDD G I + D GN +I+ FT DG +
Sbjct: 161 YRIQKFTTDGEFVLSFGSGGMNHDQFLILSGIAVDDDGNIYITDKGNRKIEKFTSDGILI 220
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+++ +G+ G+ V S+G I V + +RI
Sbjct: 221 KSYPLFGT--NYVFAPTGITVDSDGKIFVINSAENRI 255
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 110/194 (56%), Gaps = 10/194 (5%)
Query: 127 DGTFVGKFGSMG-NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFV 185
D F+ +G G + G L HP +IAV + +SD N RVQ F S G F+
Sbjct: 29 DYDFLAGWGEFGISTPGHLSHPQFIAVDDEGNAYISDLGNKRVQ-------KFSSSGEFI 81
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL 245
FG G +GQ HP +AV +++ V V+D N H++Q F ++G + +G G+++GQ
Sbjct: 82 LNFGESGKSSGQFHHPSGVAV-DSDFVYVADQNLHKIQKFTLDGVFVDEWGKYGNQDGQF 140
Query: 246 KFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
K P+ +AVD ++ V D+ N RIQ FT DG+F+ +FG G +F L G+AV +GN
Sbjct: 141 KSPKDIAVDSD-FLYVVDADNYRIQKFTTDGEFVLSFGSGGMNHDQFLILSGIAVDDDGN 199
Query: 306 ILVCDRENHRIQVF 319
I + D+ N +I+ F
Sbjct: 200 IYITDKGNRKIEKF 213
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 144/318 (45%), Gaps = 31/318 (9%)
Query: 16 LQTLLVSGIGQVGT-TPRSQYLQKRRLQFKIGSRG-SEPGCFTWPRGIAVGPDNSIVVAD 73
L +++ I GT P S L G G S PG + P+ IAV + + ++D
Sbjct: 6 LAVAVITAILLSGTFAPSSYALGDYDFLAGWGEFGISTPGHLSHPQFIAVDDEGNAYISD 65
Query: 74 SSNHRVQVCFPHFDLKTNCVFLA-----------FTWPRGIAVGPDNSIVVADSSNHRVQ 122
N RVQ ++ F+ F P G+AV D + VAD + H++Q
Sbjct: 66 LGNKRVQ------KFSSSGEFILNFGESGKSSGQFHHPSGVAVDSD-FVYVADQNLHKIQ 118
Query: 123 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDG 182
F DG FV ++G GN+ GQ + P IAV +++ + V D++N+R+Q F +DG
Sbjct: 119 KFTLDGVFVDEWGKYGNQDGQFKSPKDIAV-DSDFLYVVDADNYRIQ-------KFTTDG 170
Query: 183 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
FV FGS G Q IAV + + ++D N +++ F +G +I S+ G+
Sbjct: 171 EFVLSFGSGGMNHDQFLILSGIAVDDDGNIYITDKGNRKIEKFTSDGILIKSYPLFGTN- 229
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF-LRAFGCWGSGDGEFKGLEGVAVM 301
+ P G+ VD G I V +S NRI D L F G F +
Sbjct: 230 -YVFAPTGITVDSDGKIFVINSAENRILYLELDDNLRLSVFEQLGPFGNSFIAPTDLTFG 288
Query: 302 SNGNILVCDRENHRIQVF 319
GN+L+ D H+++ F
Sbjct: 289 FQGNLLIVDSAAHKVKSF 306
>gi|6478625|gb|AAF13928.1|AF195872_1 brain tumor [Drosophila melanogaster]
Length = 1037
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 125/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 780 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 839
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ Q D FV KFG A L+HP + V N R+IV
Sbjct: 840 GDIIVTERSPTHQIQIYN------QYD-QFVRKFG-----ATILQHPRGVTVDNKGRIIV 887
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 888 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 943
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G+G GV + SNG IL+ D N+
Sbjct: 944 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHNN 979
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 755 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 810
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ FV KFG
Sbjct: 811 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYDQFVRKFG--- 867
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 868 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 914
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 915 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGI----TNYPIGVGINSNGE 970
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 971 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1023
Query: 316 IQVF 319
+ ++
Sbjct: 1024 LYIY 1027
>gi|195580109|ref|XP_002079898.1| GD24189 [Drosophila simulans]
gi|194191907|gb|EDX05483.1| GD24189 [Drosophila simulans]
Length = 378
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 121 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 180
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 181 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 228
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 229 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 284
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G+G GV + SNG IL+ D N+
Sbjct: 285 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHNN 320
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 96 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 151
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 152 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 208
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 209 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 255
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 256 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGIT----NYPIGVGINSNGE 311
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 312 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 364
Query: 316 IQVF 319
+ ++
Sbjct: 365 LYIY 368
>gi|38492933|pdb|1Q7F|A Chain A, Brain Tumor Nhl Domain
gi|38492934|pdb|1Q7F|B Chain B, Brain Tumor Nhl Domain
Length = 286
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 123/219 (56%), Gaps = 22/219 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 29 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 88
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G FV KFG A L+HP + V N R+IV
Sbjct: 89 GDIIVTERSPTHQIQIYN-------QYGQFVRKFG-----ATILQHPRGVTVDNKGRIIV 136
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 137 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 192
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
+GQ+LR G G+G GV + SNG IL+ D N
Sbjct: 193 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHN 227
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 149/305 (48%), Gaps = 42/305 (13%)
Query: 28 GTTPRSQYLQKRRL-QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHF 86
GT +SQ ++R + K G G G FT P G+AV N I+VAD++NHR+Q+ F
Sbjct: 1 GTHMKSQIKRQRMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----F 56
Query: 87 DLKTNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFG 135
D + F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 57 DKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG 116
Query: 136 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA 195
A L+HP + V N R+IV + RV IFD NG V KFG +
Sbjct: 117 -----ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----S 160
Query: 196 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD 255
LE P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++
Sbjct: 161 KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGIT----NYPIGVGINS 216
Query: 256 QGYISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
G I + D+ NN + IFT DGQ + A F VA+M +G++++ ++ +
Sbjct: 217 NGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFD----VALMDDGSVVLASKD-Y 271
Query: 315 RIQVF 319
R+ ++
Sbjct: 272 RLYIY 276
>gi|389845489|ref|YP_006347569.1| NHL repeat protein [Mesotoga prima MesG1.Ag.4.2]
gi|387860235|gb|AFK08326.1| NHL repeat protein [Mesotoga prima MesG1.Ag.4.2]
Length = 307
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 139/284 (48%), Gaps = 9/284 (3%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
Q G +G++ G F+ P+GI V + + VAD+ NHR+QV + KT+
Sbjct: 24 FQKSWGVQGTKNGQFSDPQGIFVDGKDLVYVADTLNHRIQVFDKNGKYKTSFGNYGSENG 83
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F +P I V I VADS N RVQ F S FV +G G + GQ + P Y+A+ +
Sbjct: 84 EFLFPHDIVVDSKGFIYVADSQNGRVQKFSSKNKFVKSWGGKGPEPGQFDGPMYLAIDRS 143
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+R+ V D+ N RVQ+FD G + + G VG F +M G L + V N + +S
Sbjct: 144 DRLYVGDAFNQRVQVFDNEGTLILTVGAKVGMFDAM--NPGNLATVSGLNVDNNGYIYIS 201
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D R+Q +D G + +GS S G+ P G +D G + + NN + + P
Sbjct: 202 DDIVRRIQKYDPEGNFVAEWGSGYS--GKWGQPGGSTIDSSGNLHYINKMNNMVVVLDPK 259
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL +G G+ G F + +G++ V ++ +RIQ F
Sbjct: 260 GSFLFEWGGSGTAHGLFTRPIDLYFSDDGSVFVLEQSGNRIQRF 303
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 82/142 (57%)
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS 237
F S F +G G K GQ P I V + V V+D+ NHR+Q+FD NG+ TSFG+
Sbjct: 18 FGSSAIFQKSWGVQGTKNGQFSDPQGIFVDGKDLVYVADTLNHRIQVFDKNGKYKTSFGN 77
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
GSE G+ FP + VD +G+I V DS N R+Q F+ +F++++G G G+F G
Sbjct: 78 YGSENGEFLFPHDIVVDSKGFIYVADSQNGRVQKFSSKNKFVKSWGGKGPEPGQFDGPMY 137
Query: 298 VAVMSNGNILVCDRENHRIQVF 319
+A+ + + V D N R+QVF
Sbjct: 138 LAIDRSDRLYVGDAFNQRVQVF 159
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 99/204 (48%), Gaps = 12/204 (5%)
Query: 121 VQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQS 180
V F S F +G G K GQ P I V + V V+D+ NHR+Q+FD NG+ S
Sbjct: 15 VPSFGSSAIFQKSWGVQGTKNGQFSDPQGIFVDGKDLVYVADTLNHRIQVFDKNGKYKTS 74
Query: 181 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGS 240
FG+ G++ G+ PH I V + + V+DS N RVQ F + + S+G +G
Sbjct: 75 -------FGNYGSENGEFLFPHDIVVDSKGFIYVADSQNGRVQKFSSKNKFVKSWGGKGP 127
Query: 241 EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW-----GSGDGEFKGL 295
E GQ P +A+D + VGD+ N R+Q+F +G + G G +
Sbjct: 128 EPGQFDGPMYLAIDRSDRLYVGDAFNQRVQVFDNEGTLILTVGAKVGMFDAMNPGNLATV 187
Query: 296 EGVAVMSNGNILVCDRENHRIQVF 319
G+ V +NG I + D RIQ +
Sbjct: 188 SGLNVDNNGYIYISDDIVRRIQKY 211
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 90/239 (37%), Gaps = 46/239 (19%)
Query: 34 QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV 93
++ K + G +G EPG F P +A+ + + V D+ N RVQV FD + +
Sbjct: 111 KFSSKNKFVKSWGGKGPEPGQFDGPMYLAIDRSDRLYVGDAFNQRVQV----FDNEGTLI 166
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
G VG F +M G L + V
Sbjct: 167 LTV-------------------------------GAKVGMFDAM--NPGNLATVSGLNVD 193
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
N + +SD R+Q +D +G FV ++GS +G+ P + ++ +
Sbjct: 194 NNGYIYISDDIVRRIQKYD-------PEGNFVAEWGS--GYSGKWGQPGGSTIDSSGNLH 244
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+ N+ V + D G + +G G+ G P + D G + V + NRIQ F
Sbjct: 245 YINKMNNMVVVLDPKGSFLFEWGGSGTAHGLFTRPIDLYFSDDGSVFVLEQSGNRIQRF 303
>gi|21483488|gb|AAM52719.1| LP03649p [Drosophila melanogaster]
Length = 357
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 100 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 159
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 160 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 207
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 208 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 263
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G+G GV + SNG IL+ D N+
Sbjct: 264 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHNN 299
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 146/302 (48%), Gaps = 42/302 (13%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 75 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 130
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 131 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 187
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 188 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 234
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 235 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGIT----NYPIGVGINSNGE 290
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I + D+ NN + IFT DGQ + A F VA+M +G++++ ++ +R+
Sbjct: 291 ILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFD----VALMDDGSVVLASKD-YRLY 345
Query: 318 VF 319
++
Sbjct: 346 IY 347
>gi|260785710|ref|XP_002587903.1| hypothetical protein BRAFLDRAFT_87291 [Branchiostoma floridae]
gi|229273058|gb|EEN43914.1| hypothetical protein BRAFLDRAFT_87291 [Branchiostoma floridae]
Length = 828
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 145/288 (50%), Gaps = 38/288 (13%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTW 99
G +GSEP F++PRG+ V P N I V D+ N RVQV HF
Sbjct: 562 GGKGSEPEKFSFPRGVVVSPSNEIFVTDTLNKRVQVHSTEGVYLRHFPTVVPGTGDKVMQ 621
Query: 100 PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 155
P + + + ++ V +++ H VQ + +DGT + +F + G L H IA+ T
Sbjct: 622 PHDVCMDGNGTLWVVGRGETAEHVVQ-YSTDGTAMARFDL---EKGYLFH--GIALDMRT 675
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
N ++VSD + V VF+ DG+ V +AG++ P Y+ V ++V+
Sbjct: 676 NYILVSDPDQGEVL-------VFRPDGSMVRTV--RHPRAGEMTRPGYVTVDGEGNILVT 726
Query: 216 --DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
D +H V ++D +G+ + FG EGS EGQLKFP G+ D G I V D GN RIQIFT
Sbjct: 727 GPDLRSHYVYVYDESGKFLFQFGGEGSGEGQLKFPHGICTDSSGNIIVADRGNERIQIFT 786
Query: 274 PDGQFLRAFGCWGSGDGEFKGL--EGVAVMSNGNILVCDRENHRIQVF 319
G+F+R GL EG+AV G ++V DR N+ + +F
Sbjct: 787 RHGEFVRTVHT---------GLKPEGLAVGPEGQLVVTDRWNNTVIIF 825
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G GS G +P GI +I+VAD N R+Q+ H + V
Sbjct: 738 YDESGKFLFQFGGEGSGEGQLKFPHGICTDSSGNIIVADRGNERIQIFTRHGEF-VRTVH 796
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
P G+AVGP+ +VV D N+ V +F
Sbjct: 797 TGLK-PEGLAVGPEGQLVVTDRWNNTVIIF 825
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 78/225 (34%), Gaps = 93/225 (41%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI----------------------- 224
FG G++ + P + VS +N + V+D+ N RVQ+
Sbjct: 561 FGGKGSEPEKFSFPRGVVVSPSNEIFVTDTLNKRVQVHSTEGVYLRHFPTVVPGTGDKVM 620
Query: 225 ------FDVNGRV-----------ITSFGSEGSEEGQLKFPR-----GVAVDDQ-GYISV 261
D NG + + + ++G+ + + G+A+D + YI V
Sbjct: 621 QPHDVCMDGNGTLWVVGRGETAEHVVQYSTDGTAMARFDLEKGYLFHGIALDMRTNYILV 680
Query: 262 GDSGNNRIQIFTPDGQFLRA---------------------------------------- 281
D + +F PDG +R
Sbjct: 681 SDPDQGEVLVFRPDGSMVRTVRHPRAGEMTRPGYVTVDGEGNILVTGPDLRSHYVYVYDE 740
Query: 282 -------FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GSG+G+ K G+ S+GNI+V DR N RIQ+F
Sbjct: 741 SGKFLFQFGGEGSGEGQLKFPHGICTDSSGNIIVADRGNERIQIF 785
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW--GSGD 289
+ +FG +GSE + FPRGV V I V D+ N R+Q+ + +G +LR F G+GD
Sbjct: 558 VVTFGGKGSEPEKFSFPRGVVVSPSNEIFVTDTLNKRVQVHSTEGVYLRHFPTVVPGTGD 617
Query: 290 GEFKGLEGVAVMSNGNILVCDR 311
+ + V + NG + V R
Sbjct: 618 KVMQPHD-VCMDGNGTLWVVGR 638
>gi|156361895|ref|XP_001625519.1| predicted protein [Nematostella vectensis]
gi|156212356|gb|EDO33419.1| predicted protein [Nematostella vectensis]
Length = 230
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 122/225 (54%), Gaps = 17/225 (7%)
Query: 97 FTWPRGIAVGPD-NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P G+A N ++V D +N R+QVF DG F+ +FG G K GQL P +AV ++
Sbjct: 14 FNLPFGVAFDKKGNRLLVCDMTNQRIQVFNPDGKFIMQFGKKGKKKGQLRCPLGLAVLSS 73
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
++V D +N R+Q+F G F+ A +L+ P ++A+ N RV V+
Sbjct: 74 GNLLVVDKDNGRLQVFTDTGAFFKV-------------FAKELDLPRFVAIHN-ERVYVT 119
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
+ RV +FD +G + FG +G +G+L P G+A + +G++ V D N+R+Q+FT D
Sbjct: 120 EPRECRVSVFDCHGNRLFRFGRKGCADGELNEPTGIATNSKGHVIVSDHSNHRVQVFTAD 179
Query: 276 GQFLRAFG--CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
G F+ G G F+ EGVAV + VCD NHRIQV
Sbjct: 180 GAFITKVENPSTGKPKGHFEQAEGVAVDQEDRVYVCDTVNHRIQV 224
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 120/241 (49%), Gaps = 28/241 (11%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPD-NSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
IG +G G F P G+A N ++V D +N R+QV P D K F
Sbjct: 4 IGCKGRNSGEFNLPFGVAFDKKGNRLLVCDMTNQRIQVFNP--DGKFIMQFGKKGKKKGQ 61
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
P G+AV +++V D N R+QVF G F F A +L+ P ++A+ N
Sbjct: 62 LRCPLGLAVLSSGNLLVVDKDNGRLQVFTDTGAFFKVF------AKELDLPRFVAIHN-E 114
Query: 157 RVIVSDSNNHRVQIFDVNG-RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
RV V++ RV +FD +G R+F +FG G G+L P IA ++ VIVS
Sbjct: 115 RVYVTEPRECRVSVFDCHGNRLF--------RFGRKGCADGELNEPTGIATNSKGHVIVS 166
Query: 216 DSNNHRVQIFDVNGRVITSFG--SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
D +NHRVQ+F +G IT S G +G + GVAVD + + V D+ N+RIQ+
Sbjct: 167 DHSNHRVQVFTADGAFITKVENPSTGKPKGHFEQAEGVAVDQEDRVYVCDTVNHRIQVIP 226
Query: 274 P 274
P
Sbjct: 227 P 227
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 93/186 (50%), Gaps = 15/186 (8%)
Query: 135 GSMGNKAGQLEHPHYIAVSNT-NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
G G +G+ P +A NR++V D N R+Q+F+ DG F+ +FG G
Sbjct: 5 GCKGRNSGEFNLPFGVAFDKKGNRLLVCDMTNQRIQVFN-------PDGKFIMQFGKKGK 57
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
K GQL P +AV ++ ++V D +N R+Q+F G F E L PR VA+
Sbjct: 58 KKGQLRCPLGLAVLSSGNLLVVDKDNGRLQVFTDTGAFFKVFAKE------LDLPRFVAI 111
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
++ + V + R+ +F G L FG G DGE G+A S G+++V D N
Sbjct: 112 HNE-RVYVTEPRECRVSVFDCHGNRLFRFGRKGCADGELNEPTGIATNSKGHVIVSDHSN 170
Query: 314 HRIQVF 319
HR+QVF
Sbjct: 171 HRVQVF 176
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 19/94 (20%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------ 96
F+ G +G G P GIA ++V+D SNHRVQV + F+
Sbjct: 137 FRFGRKGCADGELNEPTGIATNSKGHVIVSDHSNHRVQV------FTADGAFITKVENPS 190
Query: 97 -------FTWPRGIAVGPDNSIVVADSSNHRVQV 123
F G+AV ++ + V D+ NHR+QV
Sbjct: 191 TGKPKGHFEQAEGVAVDQEDRVYVCDTVNHRIQV 224
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGN-ILVCDRENHRIQVF 319
+ GC G GEF GVA GN +LVCD N RIQVF
Sbjct: 1 IHIIGCKGRNSGEFNLPFGVAFDKKGNRLLVCDMTNQRIQVF 42
>gi|156384996|ref|XP_001633418.1| predicted protein [Nematostella vectensis]
gi|156220487|gb|EDO41355.1| predicted protein [Nematostella vectensis]
Length = 669
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 151/312 (48%), Gaps = 33/312 (10%)
Query: 26 QVGTTPRSQYLQKRRLQFKIGSRGSE-----PGCFTW--------PRGIAVGPDNSIVVA 72
+V R++YLQ L ++ S E P F P G+AV + I VA
Sbjct: 366 KVFVATRAEYLQASMLSIRLESSFGEYQTMVPLGFLETGQVPLRRPCGVAVSKRDVIAVA 425
Query: 73 DSSNHRVQVCFPH---FDLKTNCVFLAF-TWPRGIAVGPDNSIVVADSSNHRVQVFQSDG 128
DS N +++V + N A P +A ++I+V DS HRV V + G
Sbjct: 426 DSWNSQIRVINSEGGILRILGNSSDQAMMVHPVDVAFDDKDNILVTDSEKHRVLVLRPSG 485
Query: 129 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKF 188
+ FGS L+ P I V + V++ D V++F S G + +F
Sbjct: 486 ECIKTFGSR-----HLKSPLGILVDSCGNVVICDYGARSVKLF-------TSHGNYKCEF 533
Query: 189 GSMG-NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
S N G+ P YIA N+ ++ D N +Q+FD +G + S G G EG+ +
Sbjct: 534 KSPEVNAHGKPPRPCYIAERNSKYLVSYD--NDTIQVFDPSGDYLYSVGGTGHGEGRFRE 591
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
PRG+ VD + + V DSGN+R+Q+ PDG +R FG G G+GEF +GV VM NG+IL
Sbjct: 592 PRGLHVDARDRLFVCDSGNHRVQVMAPDGS-VRMFGTQGGGEGEFDRPQGVTVMENGDIL 650
Query: 308 VCDRENHRIQVF 319
V D+ N+R+ +
Sbjct: 651 VTDKMNNRVHTW 662
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 31 PRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT 90
P YL + +G G G F PRG+ V + + V DS NHRVQV P ++
Sbjct: 571 PSGDYL------YSVGGTGHGEGRFREPRGLHVDARDRLFVCDSGNHRVQVMAPDGSVR- 623
Query: 91 NCVFLA-------FTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+F F P+G+ V + I+V D N+RV ++
Sbjct: 624 --MFGTQGGGEGEFDRPQGVTVMENGDILVTDKMNNRVHTWK 663
>gi|391328852|ref|XP_003738897.1| PREDICTED: B-box type zinc finger protein ncl-1-like [Metaseiulus
occidentalis]
Length = 887
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 125/226 (55%), Gaps = 23/226 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ ++V T+
Sbjct: 630 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVSVVKTS 689
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP I V N R+IV
Sbjct: 690 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ANILQHPRGITVDNKGRIIV 737
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD G V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 738 VECKVMRVLIFDQAGNVLQKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 793
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH-RIQVF 319
DG FLR G G+G GV + G ILV D N+ I +F
Sbjct: 794 DGLFLRQIG----GEGVTNYPIGVCINQQGEILVADNHNNFNITIF 835
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 156/316 (49%), Gaps = 47/316 (14%)
Query: 20 LVSGIGQVGTTPRSQYLQKRRLQF--KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNH 77
L S GQ P L+++++ + K G G G FT P G+AV N I+VAD++NH
Sbjct: 593 LSSKFGQPSAYPLKSQLKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNH 652
Query: 78 RVQVCFPHFDLKTNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQS 126
R+Q+ FD + F +P ++V + IV S H++Q++
Sbjct: 653 RIQI----FDKEGRFKFQFGECGKRDGQLLYPNRVSVVKTSGDIIVTERSPTHQIQIYNQ 708
Query: 127 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVG 186
G FV KFG A L+HP I V N R+IV + RV IFD G V Q
Sbjct: 709 YGQFVRKFG-----ANILQHPRGITVDNKGRIIVVECKVMRVLIFDQAGNVLQ------- 756
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
KFG + LE P+ + V++ + +SD+ H V++F+ +G + G EG
Sbjct: 757 KFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYDGLFLRQIGGEGVT----N 808
Query: 247 FPRGVAVDDQGYISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSN 303
+P GV ++ QG I V D+ NN I IFT DGQ + A + + K + VA+M +
Sbjct: 809 YPIGVCINQQGEILVADNHNNFNITIFTQDGQLVNAL------ESKVKHAQCFDVALMDD 862
Query: 304 GNILVCDRENHRIQVF 319
G++++ ++ +R+ ++
Sbjct: 863 GSVVLASKD-YRLYIY 877
>gi|307182980|gb|EFN69967.1| Tripartite motif-containing protein 71 [Camponotus floridanus]
Length = 955
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 121/239 (50%), Gaps = 26/239 (10%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ + +I+++D SN+R+Q+++ DGT V KFGS GN Q P IAV R+I
Sbjct: 663 PWGLICDNEGNIIISDRSNNRIQIYRDDGTLVRKFGSYGNGPCQFNRPAGIAVDARRRLI 722
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D +NHR+QI + +G F+ FG G K GQ +P +AV+ + V+D+ N
Sbjct: 723 VVDKDNHRIQILTM-------EGEFLRSFGEHGEKQGQFCYPWDVAVNTACEIAVTDTRN 775
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HRVQ+F G + FG + L PRG+ + +G + V D N+ + I + +
Sbjct: 776 HRVQLFSAEGIPLRMFGGQPHMLRYLDSPRGICFNQEGKLIVTDFNNHHLLIIEYNMTDM 835
Query: 280 RAFGCWGS------------GDGE-------FKGLEGVAVMSNGNILVCDRENHRIQVF 319
R C GDG+ F+ +GV V +G+ILV D ++ I+ F
Sbjct: 836 RILKCEKELKSKRQDGSGENGDGQSDENAPTFQRPQGVIVADDGSILVADSRHNSIKAF 894
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 116/241 (48%), Gaps = 13/241 (5%)
Query: 79 VQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
+Q CFP + L + PRG + +V + +QV + +G FG
Sbjct: 601 LQSCFP-YGLNEQ---MMQPIPRGRPIANYERNIVLPNRKPELQVKSTSVQIIGHFGE-- 654
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
N L P + N +I+SD +N+R+QI+ + DGT V KFGS GN Q
Sbjct: 655 NDPDNLCRPWGLICDNEGNIIISDRSNNRIQIY-------RDDGTLVRKFGSYGNGPCQF 707
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
P IAV R+IV D +NHR+QI + G + SFG G ++GQ +P VAV+
Sbjct: 708 NRPAGIAVDARRRLIVVDKDNHRIQILTMEGEFLRSFGEHGEKQGQFCYPWDVAVNTACE 767
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
I+V D+ N+R+Q+F+ +G LR FG G+ G ++V D NH + +
Sbjct: 768 IAVTDTRNHRVQLFSAEGIPLRMFGGQPHMLRYLDSPRGICFNQEGKLIVTDFNNHHLLI 827
Query: 319 F 319
Sbjct: 828 I 828
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 151/344 (43%), Gaps = 54/344 (15%)
Query: 8 KNINSCFL--LQTLLVSGIGQ---VGTTPRSQYLQKRRLQFKIGSRG---------SEPG 53
K + SCF L ++ I + + R+ L R+ + ++ S ++P
Sbjct: 599 KLLQSCFPYGLNEQMMQPIPRGRPIANYERNIVLPNRKPELQVKSTSVQIIGHFGENDPD 658
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN--------CVFLAFTWPRGIAV 105
P G+ + +I+++D SN+R+Q+ L C F P GIAV
Sbjct: 659 NLCRPWGLICDNEGNIIISDRSNNRIQIYRDDGTLVRKFGSYGNGPC---QFNRPAGIAV 715
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
++V D NHR+Q+ +G F+ FG G K GQ +P +AV+ + V+D+ N
Sbjct: 716 DARRRLIVVDKDNHRIQILTMEGEFLRSFGEHGEKQGQFCYPWDVAVNTACEIAVTDTRN 775
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
HRVQ+ F ++G + FG + L+ P I + ++IV+D NNH + I
Sbjct: 776 HRVQL-------FSAEGIPLRMFGGQPHMLRYLDSPRGICFNQEGKLIVTDFNNHHLLII 828
Query: 226 DVN---------GRVITSFGSEGSEE---GQ-------LKFPRGVAVDDQGYISVGDSGN 266
+ N + + S +GS E GQ + P+GV V D G I V DS +
Sbjct: 829 EYNMTDMRILKCEKELKSKRQDGSGENGDGQSDENAPTFQRPQGVIVADDGSILVADSRH 888
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
N I+ F G + ++ G E G+A+ +G + D
Sbjct: 889 NSIKAFNSVGSLIYSY---KPGQEEMDRPLGIALHWDGRMAFTD 929
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 32/251 (12%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------- 95
K GS G+ P F P GIAV ++V D NHR+Q+ L FL
Sbjct: 696 KFGSYGNGPCQFNRPAGIAVDARRRLIVVDKDNHRIQI------LTMEGEFLRSFGEHGE 749
Query: 96 ---AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
F +P +AV I V D+ NHRVQ+F ++G + FG + L+ P I
Sbjct: 750 KQGQFCYPWDVAVNTACEIAVTDTRNHRVQLFSAEGIPLRMFGGQPHMLRYLDSPRGICF 809
Query: 153 SNTNRVIVSDSNNHRVQIFDVN---GRVFQSDGTFVGKF--GSMGNKAGQ-------LEH 200
+ ++IV+D NNH + I + N R+ + + K GS N GQ +
Sbjct: 810 NQEGKLIVTDFNNHHLLIIEYNMTDMRILKCEKELKSKRQDGSGENGDGQSDENAPTFQR 869
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
P + V++ ++V+DS ++ ++ F+ G +I S+ G EE + P G+A+ G ++
Sbjct: 870 PQGVIVADDGSILVADSRHNSIKAFNSVGSLIYSYKP-GQEE--MDRPLGIALHWDGRMA 926
Query: 261 VGDSGNNRIQI 271
D G N +++
Sbjct: 927 FTDYGRNYVRL 937
>gi|91081325|ref|XP_970374.1| PREDICTED: similar to AGAP010054-PA [Tribolium castaneum]
gi|270006454|gb|EFA02902.1| brain tumor protein [Tribolium castaneum]
Length = 815
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 124/219 (56%), Gaps = 22/219 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ +AV T+
Sbjct: 558 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVRTS 617
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R++V
Sbjct: 618 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ANILQHPRGVTVDNKGRIVV 665
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD G V+ FG L+FP GV V+D+ I + D+ + +++F+
Sbjct: 666 VECKVMRVIIFDQTGTVLQKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFSY 721
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
+G +LR G G+G GV + +NG IL+ D N
Sbjct: 722 EGVYLRQIG----GEGITNYPIGVGINANGEILIADNHN 756
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 144/302 (47%), Gaps = 42/302 (13%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 533 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 588
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 589 GRFKFQFGECGKRDGQLLYPNRVAVVRTSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 645
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R++V + RV IFD G V Q KFG + L
Sbjct: 646 --ANILQHPRGVTVDNKGRIVVVECKVMRVIIFDQTGTVLQ-------KFGC----SKHL 692
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F G + G EG +P GV ++ G
Sbjct: 693 EFPNGVVVNDKQEIFISDNRAHCVKVFSYEGVYLRQIGGEGI----TNYPIGVGINANGE 748
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I + D+ NN + IFT DGQ + A F VA+M +G++++ ++ +R+
Sbjct: 749 ILIADNHNNFNLTIFTQDGQLVSALESKVKHAQCF----DVALMDDGSVVLASKD-YRLY 803
Query: 318 VF 319
++
Sbjct: 804 IY 805
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
IF ++ + + KFG G GQ P +AV+ N +IV+D+NNHR+QIFD G
Sbjct: 530 IFPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG 589
Query: 230 RVITSFGSEGSEEGQLKFPRGVA-VDDQGYISVGD-SGNNRIQIFTPDGQFLRAFGCWGS 287
R FG G +GQL +P VA V G I V + S ++IQI+ GQF+R FG
Sbjct: 590 RFKFQFGECGKRDGQLLYPNRVAVVRTSGDIIVTERSPTHQIQIYNQYGQFVRKFGA--- 646
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ GV V + G I+V + + R+ +F
Sbjct: 647 --NILQHPRGVTVDNKGRIVVVECKVMRVIIF 676
>gi|221042794|dbj|BAH13074.1| unnamed protein product [Homo sapiens]
Length = 741
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 117/213 (54%), Gaps = 12/213 (5%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT +G++ IVVADS+N +QVF ++G F +FG G GQL+ P +AV
Sbjct: 486 FTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTNG 545
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+IV+D +N V IF +G F K G AG+L P +AV +IV D
Sbjct: 546 DIIVADYDNRWVSIFS-------PEGKFKTKIG-----AGRLMGPKGVAVDRNGHIIVVD 593
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ + V F NG+++ FG G+ + P VAV+++ I V D N+ +++++ DG
Sbjct: 594 NKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADG 653
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+FL FG G G+G+F GVAV SNGNI+VC
Sbjct: 654 EFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVC 686
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 114/230 (49%), Gaps = 25/230 (10%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 527
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 582
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AV+N N
Sbjct: 583 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNE 635
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISV 261
++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V
Sbjct: 636 IVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIV 685
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 94/181 (51%), Gaps = 7/181 (3%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV ++
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVCRASP 690
Query: 220 H 220
+
Sbjct: 691 Y 691
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 104/193 (53%), Gaps = 12/193 (6%)
Query: 127 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVG 186
+ V + GS G + G+ + ++ +++ R++V+DSNN +Q VF ++G F
Sbjct: 469 EDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQ-------VFSNEGQFKF 521
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
+FG G GQL+ P +AV +IV+D +N V IF G+ T G+ G+L
Sbjct: 522 RFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGA-----GRLM 576
Query: 247 FPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNI 306
P+GVAVD G+I V D+ + + F P+G+ + FG G+ D F G VAV + I
Sbjct: 577 GPKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEI 636
Query: 307 LVCDRENHRIQVF 319
+V D NH ++V+
Sbjct: 637 VVTDFHNHSVKVY 649
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
>gi|354559872|ref|ZP_08979114.1| NHL repeat containing protein [Desulfitobacterium metallireducens
DSM 15288]
gi|353539798|gb|EHC09279.1| NHL repeat containing protein [Desulfitobacterium metallireducens
DSM 15288]
Length = 342
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 134/271 (49%), Gaps = 14/271 (5%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVA 114
F P + + I VAD+ + ++QV + + + + +P G+A + + V+
Sbjct: 77 FKSPLAVTTSTEGKIFVADTGHSQIQVLSSRGEWEKDFGRGSLVYPTGLAFF-EQKLYVS 135
Query: 115 DSSNHRVQVFQSDGTFV------GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
D ++ ++Q +G + + K GQ P I VS+ + ++D N V
Sbjct: 136 DPQAQKIFIYQENGEELPALLEHQRLILKDGKPGQFIRPSNIQVSSDHLFYITDIANQCV 195
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
+ D G++ +S FGS G GQ +P+ + + N++ VSDSNN R+QIF+
Sbjct: 196 VVLDQQGKILRS-------FGSPGTADGQFNYPNALFIDKDNKIYVSDSNNARLQIFNSE 248
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G +T + G + PRGVAV+DQG I V D +N ++++ G L G GS
Sbjct: 249 GEFLTKITGSNGKLGAMTLPRGVAVNDQGQIYVVDVFSNSVRVYDETGYELWVLGGMGSN 308
Query: 289 DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F G+ + + G I + DREN+RIQVF
Sbjct: 309 QGQFNFPNGICIDNKGLIYITDRENNRIQVF 339
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 5/140 (3%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT-----N 91
Q+ ++ GS G+ G F +P + + DN I V+DS+N R+Q+ + T N
Sbjct: 200 QQGKILRSFGSPGTADGQFNYPNALFIDKDNKIYVSDSNNARLQIFNSEGEFLTKITGSN 259
Query: 92 CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
A T PRG+AV I V D ++ V+V+ G + G MG+ GQ P+ I
Sbjct: 260 GKLGAMTLPRGVAVNDQGQIYVVDVFSNSVRVYDETGYELWVLGGMGSNQGQFNFPNGIC 319
Query: 152 VSNTNRVIVSDSNNHRVQIF 171
+ N + ++D N+R+Q+F
Sbjct: 320 IDNKGLIYITDRENNRIQVF 339
>gi|219851898|ref|YP_002466330.1| NHL repeat containing protein [Methanosphaerula palustris E1-9c]
gi|219546157|gb|ACL16607.1| NHL repeat containing protein [Methanosphaerula palustris E1-9c]
Length = 387
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 134/281 (47%), Gaps = 12/281 (4%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ--VCFPHFDLKTN---CVFLAFT 98
+ G GS G F +P G+ V ++ VAD+ N++ Q F + N AF
Sbjct: 34 QWGRYGSGDGQFNYPCGVGVDSAGNVYVADTFNNQTQKFTSTGGFITRWNGSASAGGAFY 93
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P G+A ++ VAD N ++Q F + G F+ + + G P +AV + V
Sbjct: 94 YPCGVAFDSAGNVYVADEYNDQIQKFTATGGFITSWNGSASAGGAFNKPGGVAVDSVGNV 153
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
V+DS N+++Q F S G F+ + + G E+P +AV + V V+D+
Sbjct: 154 YVADSANNQIQ-------KFTSTGGFITSWNGSASAGGAFEYPGGVAVDSAGNVYVADTF 206
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
N ++Q F G IT + S G P GVAVD G + V D GNN +Q FT G F
Sbjct: 207 NGQIQKFTSTGEFITRWNGSASAGGVFDKPSGVAVDSAGNVYVADWGNNWVQKFTSTGGF 266
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ + G G F+ +AV S GN+ V D N+RIQ F
Sbjct: 267 ITGWNGSGLAGGAFQYPVSIAVDSTGNVYVADYGNNRIQKF 307
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 112/232 (48%), Gaps = 12/232 (5%)
Query: 50 SEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN-----CVFLAFTWPRGIA 104
S G F +P G+A ++ VAD N ++Q T+ AF P G+A
Sbjct: 87 SAGGAFYYPCGVAFDSAGNVYVADEYNDQIQKFTATGGFITSWNGSASAGGAFNKPGGVA 146
Query: 105 VGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 164
V ++ VADS+N+++Q F S G F+ + + G E+P +AV + V V+D+
Sbjct: 147 VDSVGNVYVADSANNQIQKFTSTGGFITSWNGSASAGGAFEYPGGVAVDSAGNVYVADTF 206
Query: 165 NHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 224
N ++Q F S G F+ ++ + G + P +AV + V V+D N+ VQ
Sbjct: 207 NGQIQ-------KFTSTGEFITRWNGSASAGGVFDKPSGVAVDSAGNVYVADWGNNWVQK 259
Query: 225 FDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
F G IT + G G ++P +AVD G + V D GNNRIQ F P G
Sbjct: 260 FTSTGGFITGWNGSGLAGGAFQYPVSIAVDSTGNVYVADYGNNRIQKFAPAG 311
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 121 VQVFQSDGTFV--GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVF 178
+ +DG +V ++G G+ GQ +P + V + V V+D+ N++ Q F
Sbjct: 20 IPAVSADGGYVYSTQWGRYGSGDGQFNYPCGVGVDSAGNVYVADTFNNQTQ-------KF 72
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSE 238
S G F+ ++ + G +P +A + V V+D N ++Q F G ITS+
Sbjct: 73 TSTGGFITRWNGSASAGGAFYYPCGVAFDSAGNVYVADEYNDQIQKFTATGGFITSWNGS 132
Query: 239 GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGV 298
S G P GVAVD G + V DS NN+IQ FT G F+ ++ S G F+ GV
Sbjct: 133 ASAGGAFNKPGGVAVDSVGNVYVADSANNQIQKFTSTGGFITSWNGSASAGGAFEYPGGV 192
Query: 299 AVMSNGNILVCDRENHRIQVF 319
AV S GN+ V D N +IQ F
Sbjct: 193 AVDSAGNVYVADTFNGQIQKF 213
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 50 SEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ--VCFPHFDLKTNCVFLA---FTWPRGIA 104
S G F P G+AV ++ VAD N+ VQ F N LA F +P IA
Sbjct: 228 SAGGVFDKPSGVAVDSAGNVYVADWGNNWVQKFTSTGGFITGWNGSGLAGGAFQYPVSIA 287
Query: 105 VGPDNSIVVADSSNHRVQVFQSDGT 129
V ++ VAD N+R+Q F GT
Sbjct: 288 VDSTGNVYVADYGNNRIQKFAPAGT 312
>gi|320104265|ref|YP_004179856.1| NHL repeat containing protein [Isosphaera pallida ATCC 43644]
gi|319751547|gb|ADV63307.1| NHL repeat containing protein [Isosphaera pallida ATCC 43644]
Length = 344
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 153/329 (46%), Gaps = 33/329 (10%)
Query: 5 SEAK-NINSCFLLQTLLVSGIGQV-GTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIA 62
SEA+ I + +L L + V G PR R G G+ G PR IA
Sbjct: 32 SEARFRIAAASILMVALACLVVSVSGCDPRG----SERPDLVWGVYGTRDGWLKKPRVIA 87
Query: 63 VGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW---------PRGIAVGPDNSIVV 113
+ D+ + +AD ++ R+QV + VFL +W P G+ V ++V
Sbjct: 88 IDADDQLYIADLTD-RIQV------FNRDGVFLR-SWRVPQLNVDGPSGLTVDRLGRVLV 139
Query: 114 ADSSNHRVQVFQSDGTFVGKFGS--MGNKAGQLEHPHYIAVSNTNRVIVSD-SNNHRVQI 170
AD+ +R+ V+ G + + G G + G+ +P + + +S+ N R+Q
Sbjct: 140 ADTHFYRILVYDRQGNLLFQVGDGIQGTEPGRFGYPTDVVIDEQGCFYISEYGENDRIQ- 198
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VF +G ++ ++G G + GQ P +A + R+ V+DS NHR+Q+FD G
Sbjct: 199 ------VFSPEGIWLRQWGGHGYEPGQFIRPTALAFDRSQRLFVADSCNHRIQVFDTQGN 252
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
++ +G G +G L +P + G + V + GN R+Q FTPDGQ +G G G
Sbjct: 253 LLDLWGKLGDAQGDLSYPYDLCFGPDGLVYVIEYGNQRVQRFTPDGQPRGVWGGPGRQPG 312
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G +AV S G + D NHR+Q F
Sbjct: 313 RFNGPWALAVDSRGFVHAIDTNNHRVQRF 341
>gi|260809305|ref|XP_002599446.1| hypothetical protein BRAFLDRAFT_223862 [Branchiostoma floridae]
gi|229284725|gb|EEN55458.1| hypothetical protein BRAFLDRAFT_223862 [Branchiostoma floridae]
Length = 684
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 142/282 (50%), Gaps = 28/282 (9%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV--FLAFTWP 100
IG +GSE G F P G+AV D ++VAD N RVQV FD+ N + F +
Sbjct: 423 LTIGKKGSEDGDFDNPIGLAVYQDK-LIVADGHNERVQV----FDVMGNHLSSFPTSAFT 477
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
+G+AV D +I+V ++ V +F S G F G + P+ +AV +++
Sbjct: 478 KGVAVDKDGNIIV--TAGQEVMIFTSSGQLQRTFTH-----GDFDIPYGVAVDGDGHIVM 530
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
D + H V +FD N R+ + K G GN G +P+++ V N +IVSD NH
Sbjct: 531 VDRDAHCVFLFDFNCRLIR-------KMGVEGNGLGCFNYPNFVTVDTENNIIVSDLRNH 583
Query: 221 RVQIFDVNGRVITSFGSEGS--EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
R Q FD G + G +G E+G+L FP G+AVD +G + + + NR+++ DG
Sbjct: 584 RAQGFDQEGNLKFQIGHKGLDIEQGELNFPTGIAVDAEGNVVMAELSGNRLKVMRSDGID 643
Query: 279 LRAFGCWGSGDGE-FKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ C S DG+ GVAV +G + V D NH I+ +
Sbjct: 644 V----CTISSDGDKLNKPHGVAVTEDGFVFVADSGNHCIKKY 681
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---- 95
RL K+G G+ GCF +P + V +N+I+V+D NHR Q FD + N F
Sbjct: 546 RLIRKMGVEGNGLGCFNYPNFVTVDTENNIIVSDLRNHRAQ----GFDQEGNLKFQIGHK 601
Query: 96 -------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
+P GIAV + ++V+A+ S +R++V +SDG V S G+K L PH
Sbjct: 602 GLDIEQGELNFPTGIAVDAEGNVVMAELSGNRLKVMRSDGIDVCTISSDGDK---LNKPH 658
Query: 149 YIAVSNTNRVIVSDSNNHRVQIF 171
+AV+ V V+DS NH ++ +
Sbjct: 659 GVAVTEDGFVFVADSGNHCIKKY 681
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 37 QKRRLQFKIGSRGS--EPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Q+ L+F+IG +G E G +P GIAV + ++V+A+ S +R++V D C
Sbjct: 590 QEGNLKFQIGHKGLDIEQGELNFPTGIAVDAEGNVVMAELSGNRLKVM--RSDGIDVCTI 647
Query: 95 LA----FTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P G+AV D + VADS NH ++ ++
Sbjct: 648 SSDGDKLNKPHGVAVTEDGFVFVADSGNHCIKKYK 682
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ + G +GSE+G P G+AV Q + V D N R+Q+F G L +F
Sbjct: 422 VLTIGKKGSEDGDFDNPIGLAV-YQDKLIVADGHNERVQVFDVMGNHLSSFPTSAF---- 476
Query: 292 FKGLEGVAVMSNGNILV 308
+GVAV +GNI+V
Sbjct: 477 ---TKGVAVDKDGNIIV 490
>gi|158299092|ref|XP_319208.4| AGAP010054-PA [Anopheles gambiae str. PEST]
gi|157014202|gb|EAA13775.5| AGAP010054-PA [Anopheles gambiae str. PEST]
Length = 830
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 126/220 (57%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ +AV T+
Sbjct: 573 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVRTS 632
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V + R++V
Sbjct: 633 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ANILQHPRGVTVDSKGRIVV 680
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD +G V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 681 VECKVMRVIIFDQSGNVLQKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 736
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQFLR G G+G GV + ++G IL+ D N+
Sbjct: 737 EGQFLRQIG----GEGVTNYPIGVGINASGEILIADNHNN 772
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 150/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 548 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 603
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 604 GRFKFQFGECGKRDGQLLYPNRVAVVRTSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 660
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V + R++V + RV IFD +G V Q KFG + L
Sbjct: 661 --ANILQHPRGVTVDSKGRIVVVECKVMRVIIFDQSGNVLQ-------KFGC----SKHL 707
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 708 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQFLRQIGGEGVT----NYPIGVGINASGE 763
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 764 ILIADNHNNFNLTIFTQDGQLVSAM------ESKVKHAQCFDVALMDDGSVVLASKD-YR 816
Query: 316 IQVF 319
+ ++
Sbjct: 817 LYIY 820
>gi|196008133|ref|XP_002113932.1| hypothetical protein TRIADDRAFT_57864 [Trichoplax adhaerens]
gi|190582951|gb|EDV23022.1| hypothetical protein TRIADDRAFT_57864 [Trichoplax adhaerens]
Length = 726
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 122/243 (50%), Gaps = 19/243 (7%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIV-VADSSNHRVQVCFPHFDLKTNCVFLAFTW---- 99
+G G G F P G+A+ ++ V D N R+Q+ FDL + +
Sbjct: 463 LGRYGLNIGEFRSPSGVAIDDKRCLLAVCDRDNIRIQI----FDLASYEHVSSIDVSGHM 518
Query: 100 ---PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
P IA+ ++ D + + VF DG + K GS G +AGQ YIAV N N
Sbjct: 519 QDGPFDIAIDGKGRLLTTDPKGNGIFVFDGDGNMLYKIGSRGQEAGQFGGLCYIAVDNAN 578
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ + DS+N R+Q VF+ GT V +G+ GN+ Q P I++ + + + ++D
Sbjct: 579 NIYICDSDNSRIQ-------VFEERGTLVDCYGNYGNEMRQFNLPAGISIGSNSNIYIAD 631
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
NHR+QI D NG+ I +FG GS G+ FP G+A D Q + V D N R+QIF +G
Sbjct: 632 RGNHRIQILDSNGQFIHAFGVRGSLNGEFDFPHGIATDVQNNVIVADHYNTRLQIFNSEG 691
Query: 277 QFL 279
+ +
Sbjct: 692 EII 694
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 116/224 (51%), Gaps = 10/224 (4%)
Query: 97 FTWPRGIAVGPDNSIV-VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P G+A+ ++ V D N R+Q+F D S+ + P IA+
Sbjct: 473 FRSPSGVAIDDKRCLLAVCDRDNIRIQIF--DLASYEHVSSIDVSGHMQDGPFDIAIDGK 530
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
R++ +D + + +FD DG + K GS G +AGQ YIAV N N + +
Sbjct: 531 GRLLTTDPKGNGIFVFD-------GDGNMLYKIGSRGQEAGQFGGLCYIAVDNANNIYIC 583
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
DS+N R+Q+F+ G ++ +G+ G+E Q P G+++ I + D GN+RIQI +
Sbjct: 584 DSDNSRIQVFEERGTLVDCYGNYGNEMRQFNLPAGISIGSNSNIYIADRGNHRIQILDSN 643
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GQF+ AFG GS +GEF G+A N++V D N R+Q+F
Sbjct: 644 GQFIHAFGVRGSLNGEFDFPHGIATDVQNNVIVADHYNTRLQIF 687
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 94/191 (49%), Gaps = 22/191 (11%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV------F 94
+ +KIGSRG E G F IAV N+I + DS N R+QV F +C
Sbjct: 552 MLYKIGSRGQEAGQFGGLCYIAVDNANNIYICDSDNSRIQV-FEERGTLVDCYGNYGNEM 610
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F P GI++G +++I +AD NHR+Q+ S+G F+ FG G+ G+ + PH IA
Sbjct: 611 RQFNLPAGISIGSNSNIYIADRGNHRIQILDSNGQFIHAFGVRGSLNGEFDFPHGIATDV 670
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
N VIV+D N R+QIF+ G + K + PH +A + V
Sbjct: 671 QNNVIVADHYNTRLQIFNSEGEIIH--------------KIDNIILPHCVACDRCGHIYV 716
Query: 215 SDSNNHRVQIF 225
+ +N R+ +F
Sbjct: 717 TTKDN-RIYVF 726
>gi|260785768|ref|XP_002587932.1| hypothetical protein BRAFLDRAFT_87320 [Branchiostoma floridae]
gi|229273087|gb|EEN43943.1| hypothetical protein BRAFLDRAFT_87320 [Branchiostoma floridae]
Length = 416
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 139/284 (48%), Gaps = 34/284 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTW 99
G +GSEPG F P G+ V P N I VAD N RVQV HF
Sbjct: 154 GGKGSEPGKFWHPGGVVVSPSNEIFVADHINERVQVHSTEGVYLRHFPTVVPGTGDTDMM 213
Query: 100 PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 155
P GI + + ++ V + + H VQ + +DGT + F + G IAV T
Sbjct: 214 PHGICMDGNGTLWVVGRGEKAGHVVQ-YSTDGTAMAGFEKSHDYRG-------IAVDMRT 265
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
N ++V+D + V VF+ DG+ V + G++ P Y+ V ++VS
Sbjct: 266 NHILVADPDAGEVH-------VFRPDGSLVRTVRH--PRGGEMTRPGYVTVDGEGNILVS 316
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +++ V ++D +G+ + FG +GS EGQL P G+ D GYI V DSGN+RIQIFT
Sbjct: 317 DWDSNSVYVYDESGKFLFQFGGKGSGEGQLMNPLGICTDSSGYILVADSGNDRIQIFTRH 376
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+F+R GS EG+AV G ++V D NH + VF
Sbjct: 377 SEFVRTLRT-GSNP------EGLAVGPEGQLVVTDCYNHTVTVF 413
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 98/223 (43%), Gaps = 39/223 (17%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM-- 191
FG G++ G+ HP + VS +N + V+D N RVQ+ G + T V G
Sbjct: 153 FGGKGSEPGKFWHPGGVVVSPSNEIFVADHINERVQVHSTEGVYLRHFPTVVPGTGDTDM 212
Query: 192 ------------------GNKAGQL-------------EHPHY---IAVS-NTNRVIVSD 216
G KAG + E H IAV TN ++V+D
Sbjct: 213 MPHGICMDGNGTLWVVGRGEKAGHVVQYSTDGTAMAGFEKSHDYRGIAVDMRTNHILVAD 272
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ V +F +G ++ + G++ P V VD +G I V D +N + ++ G
Sbjct: 273 PDAGEVHVFRPDGSLVRTV--RHPRGGEMTRPGYVTVDGEGNILVSDWDSNSVYVYDESG 330
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+FL FG GSG+G+ G+ S+G ILV D N RIQ+F
Sbjct: 331 KFLFQFGGKGSGEGQLMNPLGICTDSSGYILVADSGNDRIQIF 373
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G +GS G P GI I+VADS N R+Q+ H +
Sbjct: 326 YDESGKFLFQFGGKGSGEGQLMNPLGICTDSSGYILVADSGNDRIQIFTRHSEFVRT--L 383
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
+ P G+AVGP+ +VV D NH V VF
Sbjct: 384 RTGSNPEGLAVGPEGQLVVTDCYNHTVTVF 413
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 20/177 (11%)
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVG---KFGSMGNKAGQLEHPHYIAVS 207
AVS + R +++ + G S G F+ FG G++ G+ HP + VS
Sbjct: 117 AVSASER----EASKEERHTAETEGAAAGSTGDFIQGAITFGGKGSEPGKFWHPGGVVVS 172
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK-FPRGVAVDDQGYISV---GD 263
+N + V+D N RVQ+ G + F + G P G+ +D G + V G+
Sbjct: 173 PSNEIFVADHINERVQVHSTEGVYLRHFPTVVPGTGDTDMMPHGICMDGNGTLWVVGRGE 232
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV-MSNGNILVCDRENHRIQVF 319
+ +Q ++ DG + F + G+AV M +ILV D + + VF
Sbjct: 233 KAGHVVQ-YSTDGTAMAGF-------EKSHDYRGIAVDMRTNHILVADPDAGEVHVF 281
>gi|296132933|ref|YP_003640180.1| NHL repeat containing protein [Thermincola potens JR]
gi|296031511|gb|ADG82279.1| NHL repeat containing protein [Thermincola potens JR]
Length = 316
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 117/220 (53%), Gaps = 11/220 (5%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F+WP GIAV I +AD++ HR+++F + V G G K G+L +P +AV++
Sbjct: 59 FSWPVGIAVH-KGQIYIADANRHRIRIFTPEWRLVKNIGHYGKKKGELGYPVGVAVNSEG 117
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ VS+ N+R+Q VF ++G F F + ++ P IA+ ++ V+V D
Sbjct: 118 EIFVSEVVNNRIQ-------VFSAEGAFKSFFP---QRKVDIKSPTAIAIDKSDNVLVFD 167
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+H +++FD G+++ FG GS GQLKF G+AV G I V DSGN RIQ F G
Sbjct: 168 RGDHFIKVFDRTGKLLFKFGGPGSSPGQLKFAMGIAVLPNGNICVSDSGNRRIQFFDKQG 227
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+FL F G F G+A ++N + V D R+
Sbjct: 228 KFLAQFAGGTDGLNGFALPRGIAAINNEKVAVVDALARRV 267
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 25/282 (8%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FT 98
KI G + F+WP GIAV I +AD++ HR+++ P + L N
Sbjct: 48 KIIYYGPQEDPFSWPVGIAVH-KGQIYIADANRHRIRIFTPEWRLVKNIGHYGKKKGELG 106
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P G+AV + I V++ N+R+QVF ++G F F + ++ P IA+ ++ V
Sbjct: 107 YPVGVAVNSEGEIFVSEVVNNRIQVFSAEGAFKSFF---PQRKVDIKSPTAIAIDKSDNV 163
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+V D +H +++FD G++ + KFG G+ GQL+ IAV + VSDS
Sbjct: 164 LVFDRGDHFIKVFDRTGKL-------LFKFGGPGSSPGQLKFAMGIAVLPNGNICVSDSG 216
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
N R+Q FD G+ + F PRG+A + ++V D+ R+ +
Sbjct: 217 NRRIQFFDKQGKFLAQFAGGTDGLNGFALPRGIAAINNEKVAVVDALARRVL------EI 270
Query: 279 LRAFGCWGSG--DGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
R W S +F +G A ++G + V DR ++ + V
Sbjct: 271 SRKKDAWESKILGKDFVVPDG-AFYADGRLYVADRGDNSVAV 311
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 92/173 (53%), Gaps = 11/173 (6%)
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
P IAV + ++ ++D+N HR++IF R+ V G G K G+L +P +AV
Sbjct: 62 PVGIAV-HKGQIYIADANRHRIRIFTPEWRL-------VKNIGHYGKKKGELGYPVGVAV 113
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
++ + VS+ N+R+Q+F G + F + +K P +A+D + V D G+
Sbjct: 114 NSEGEIFVSEVVNNRIQVFSAEGAFKSFFPQRKVD---IKSPTAIAIDKSDNVLVFDRGD 170
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ I++F G+ L FG GS G+ K G+AV+ NGNI V D N RIQ F
Sbjct: 171 HFIKVFDRTGKLLFKFGGPGSSPGQLKFAMGIAVLPNGNICVSDSGNRRIQFF 223
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 89/194 (45%), Gaps = 27/194 (13%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV---------CFPH--FDL 88
RL IG G + G +P G+AV + I V++ N+R+QV FP D+
Sbjct: 90 RLVKNIGHYGKKKGELGYPVGVAVNSEGEIFVSEVVNNRIQVFSAEGAFKSFFPQRKVDI 149
Query: 89 KTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
K+ P IA+ ++++V D +H ++VF G + KFG G+ GQL+
Sbjct: 150 KS---------PTAIAIDKSDNVLVFDRGDHFIKVFDRTGKLLFKFGGPGSSPGQLKFAM 200
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 208
IAV + VSDS N R+Q FD G+ F+ +F + P IA N
Sbjct: 201 GIAVLPNGNICVSDSGNRRIQFFDKQGK-------FLAQFAGGTDGLNGFALPRGIAAIN 253
Query: 209 TNRVIVSDSNNHRV 222
+V V D+ RV
Sbjct: 254 NEKVAVVDALARRV 267
>gi|6478627|gb|AAF13929.1|AF195873_1 brain tumor [Drosophila melanogaster]
Length = 1037
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 124/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
FT P G+AV N I+VAD++N R+Q+F +G F +FG G + QL +P+ +A V N+
Sbjct: 780 FTEPSGVAVNAQNDIIVADTNNLRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNS 839
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R+IV
Sbjct: 840 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDNKGRIIV 887
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD NG V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 888 VECKVMRVIIFDQNGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 943
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G+G GV + SNG IL+ D N+
Sbjct: 944 EGQYLRQIG----GEGITNYPIGVGINSNGEILIADNHNN 979
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++N R+Q+ FD +
Sbjct: 755 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNLRIQI----FDKE 810
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 811 GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 867
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD NG V KFG + L
Sbjct: 868 --ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHL 914
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 915 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGIT----NYPIGVGINSNGE 970
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 971 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1023
Query: 316 IQVF 319
+ ++
Sbjct: 1024 LYIY 1027
>gi|291235472|ref|XP_002737668.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 701
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 153/309 (49%), Gaps = 22/309 (7%)
Query: 18 TLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNH 77
T+LV+ G+ + + K+ L G GS F++PR + + + +++V DS N
Sbjct: 406 TVLVNNKSVQGSPVKINVIPKKGLMGNYGKNGSGVSQFSYPRDVLITSEGNVLVCDSKNI 465
Query: 78 RVQVCFPHFDLKTNCVFLAFT---WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKF 134
R+Q+ K F+ F +P A D + + D +N +V V ++ + F
Sbjct: 466 RLQLLTLDGKHKRMIQFIGFNKPFYPYFAAKSQDGNYFIVDDNNKQVVVCNNNFELIRCF 525
Query: 135 GSMGNKAGQLEHPHYIAVSNTN-RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
G G+L +P I++S N RV V D N+H + R++ DG ++ FGS G+
Sbjct: 526 G-----IGELTYPRGISISPVNGRVYVVDYNSHCI-------RIYNQDGRYIKSFGSQGD 573
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
Q + P I+ + +IV+DS NHR+Q+ G + FGS G+ +GQL P GVA
Sbjct: 574 GDCQFQSPWGISTDSKGNLIVADSWNHRIQVLTGEGEFLFKFGSHGNSDGQLHNPSGVAT 633
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN---GNILVCD 310
D GY+ V D NNR+Q + GQF+ DG L G+ V ++ G ++V D
Sbjct: 634 DTDGYVYVSDYNNNRVQKYDCHGQFVCRID--SPADGLSLPL-GICVTNDKPFGKVVVAD 690
Query: 311 RENHRIQVF 319
N+ +++F
Sbjct: 691 YGNNCMKIF 699
>gi|157116292|ref|XP_001652809.1| hypothetical protein AaeL_AAEL007527 [Aedes aegypti]
gi|108876534|gb|EAT40759.1| AAEL007527-PA [Aedes aegypti]
Length = 394
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 124/245 (50%), Gaps = 19/245 (7%)
Query: 87 DLKTNCVFLAFTWPRGIAVGPDN-SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE 145
D+ V +P GI I V+D H + VF SDGTF+ + G++ G L
Sbjct: 154 DILQRIVHDDMAYPNGITFDESKQEIFVSDKWKHCIFVFSSDGTFLRQLCDKGDQEGLLR 213
Query: 146 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN----KAGQLEHP 201
P IA+ + + + D+ N R+Q V ++G + +FG + KA Q + P
Sbjct: 214 APEGIAIGPSGVLFICDTGNDRIQC------VSPTNGRMLSQFGRIPKDQLLKASQTKTP 267
Query: 202 -HYIAVS-------NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
Y+ + + ++V V DS N RV+IF+ G I FG GS GQ ++P +AV
Sbjct: 268 TRYVDLKCPMGVAVHDDKVFVLDSGNRRVKIFNKQGEKILEFGQVGSVIGQFQYPEVIAV 327
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
D G+I VGD GN ++ I+ P+G F+ A GC G G F + G+ V + I++ D +N
Sbjct: 328 DPSGFILVGDGGNAKVLIYNPNGSFVTALGCRGDKAGRFNWVSGLFVTKDREIIISDYKN 387
Query: 314 HRIQV 318
H +QV
Sbjct: 388 HTVQV 392
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 27/200 (13%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP------------------- 84
++ +G + G P GIA+GP + + D+ N R+Q P
Sbjct: 201 QLCDKGDQEGLLRAPEGIAIGPSGVLFICDTGNDRIQCVSPTNGRMLSQFGRIPKDQLLK 260
Query: 85 HFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQL 144
KT ++ P G+AV D+ + V DS N RV++F G + +FG +G+ GQ
Sbjct: 261 ASQTKTPTRYVDLKCPMGVAVH-DDKVFVLDSGNRRVKIFNKQGEKILEFGQVGSVIGQF 319
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYI 204
++P IAV + ++V D N +V I++ N G+FV G G+KAG+ +
Sbjct: 320 QYPEVIAVDPSGFILVGDGGNAKVLIYNPN-------GSFVTALGCRGDKAGRFNWVSGL 372
Query: 205 AVSNTNRVIVSDSNNHRVQI 224
V+ +I+SD NH VQ+
Sbjct: 373 FVTKDREIIISDYKNHTVQV 392
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 23/191 (12%)
Query: 144 LEHPHYIAVSNTNR-VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
+ +P+ I + + + VSD H + VF SDGTF+ + G++ G L P
Sbjct: 164 MAYPNGITFDESKQEIFVSDKWKHCI-------FVFSSDGTFLRQLCDKGDQEGLLRAPE 216
Query: 203 YIAVSNTNRVIVSDSNNHRVQ-IFDVNGRVITSFGSEGSEEG-------------QLKFP 248
IA+ + + + D+ N R+Q + NGR+++ FG ++ LK P
Sbjct: 217 GIAIGPSGVLFICDTGNDRIQCVSPTNGRMLSQFGRIPKDQLLKASQTKTPTRYVDLKCP 276
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
GVAV D + V DSGN R++IF G+ + FG GS G+F+ E +AV +G ILV
Sbjct: 277 MGVAVHDDK-VFVLDSGNRRVKIFNKQGEKILEFGQVGSVIGQFQYPEVIAVDPSGFILV 335
Query: 309 CDRENHRIQVF 319
D N ++ ++
Sbjct: 336 GDGGNAKVLIY 346
>gi|170064323|ref|XP_001867478.1| brain tumor protein [Culex quinquefasciatus]
gi|167881740|gb|EDS45123.1| brain tumor protein [Culex quinquefasciatus]
Length = 898
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 126/220 (57%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ +AV T+
Sbjct: 641 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVRTS 700
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V + R++V
Sbjct: 701 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ANILQHPRGVTVDSKGRIVV 748
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD +G V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 749 VECKVMRVIIFDQSGNVLQKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 804
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQFLR G G+G GV + ++G IL+ D N+
Sbjct: 805 EGQFLRQIG----GEGITNYPIGVGINASGEILIADNHNN 840
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 150/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 616 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 671
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 672 GRFKFQFGECGKRDGQLLYPNRVAVVRTSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 728
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V + R++V + RV IFD +G V Q KFG + L
Sbjct: 729 --ANILQHPRGVTVDSKGRIVVVECKVMRVIIFDQSGNVLQ-------KFGC----SKHL 775
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 776 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQFLRQIGGEGIT----NYPIGVGINASGE 831
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 832 ILIADNHNNFNLTIFTQDGQLVSAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 884
Query: 316 IQVF 319
+ ++
Sbjct: 885 LYIY 888
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
IF ++ + + KFG G GQ P +AV+ N +IV+D+NNHR+QIFD G
Sbjct: 613 IFPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG 672
Query: 230 RVITSFGSEGSEEGQLKFPRGVA-VDDQGYISVGD-SGNNRIQIFTPDGQFLRAFGCWGS 287
R FG G +GQL +P VA V G I V + S ++IQI+ GQF+R FG
Sbjct: 673 RFKFQFGECGKRDGQLLYPNRVAVVRTSGDIIVTERSPTHQIQIYNQYGQFVRKFGA--- 729
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ GV V S G I+V + + R+ +F
Sbjct: 730 --NILQHPRGVTVDSKGRIVVVECKVMRVIIF 759
>gi|157108026|ref|XP_001650044.1| brat protein [Aedes aegypti]
gi|108879425|gb|EAT43650.1| AAEL004918-PA [Aedes aegypti]
Length = 904
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 126/220 (57%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ +AV T+
Sbjct: 647 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVRTS 706
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V + R++V
Sbjct: 707 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ANILQHPRGVTVDSKGRIVV 754
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD +G V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 755 VECKVMRVIIFDQSGNVLQKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 810
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQFLR G G+G GV + ++G IL+ D N+
Sbjct: 811 EGQFLRQIG----GEGITNYPIGVGINASGEILIADNHNN 846
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 150/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 622 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 677
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 678 GRFKFQFGECGKRDGQLLYPNRVAVVRTSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 734
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V + R++V + RV IFD +G V Q KFG + L
Sbjct: 735 --ANILQHPRGVTVDSKGRIVVVECKVMRVIIFDQSGNVLQ-------KFGC----SKHL 781
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 782 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQFLRQIGGEGIT----NYPIGVGINASGE 837
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 838 ILIADNHNNFNLTIFTQDGQLVSAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 890
Query: 316 IQVF 319
+ ++
Sbjct: 891 LYIY 894
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
IF ++ + + KFG G GQ P +AV+ N +IV+D+NNHR+QIFD G
Sbjct: 619 IFPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG 678
Query: 230 RVITSFGSEGSEEGQLKFPRGVA-VDDQGYISVGD-SGNNRIQIFTPDGQFLRAFGCWGS 287
R FG G +GQL +P VA V G I V + S ++IQI+ GQF+R FG
Sbjct: 679 RFKFQFGECGKRDGQLLYPNRVAVVRTSGDIIVTERSPTHQIQIYNQYGQFVRKFGA--- 735
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ GV V S G I+V + + R+ +F
Sbjct: 736 --NILQHPRGVTVDSKGRIVVVECKVMRVIIF 765
>gi|340382510|ref|XP_003389762.1| PREDICTED: hypothetical protein LOC100636631 [Amphimedon
queenslandica]
Length = 813
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 114/225 (50%), Gaps = 20/225 (8%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
+PR IA+ + VAD N+R+Q F DG FV +FG+ G+ GQL+ P I + T
Sbjct: 570 LKYPRNIAIDSQGLVYVADRDNNRIQKFSPDGKFVSQFGTEGSGPGQLDIPIGITIDTTA 629
Query: 157 R--VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
V VS+ N+R+ VF SDG FV KFGS G+ Q +P +A +
Sbjct: 630 TGLVYVSEGGNNRIS-------VFTSDGVFVSKFGSYGSNIDQFNNPSGLAFDKDGFFFI 682
Query: 215 SDSNNHRVQIFDVNG-----------RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
D H+ +++ + + FGS GS GQ K+P +A+D QG + V D
Sbjct: 683 CDFITHKDHKYNLIADSFTKHKEALEKSLIPFGSRGSANGQFKYPNDIAIDSQGLVYVTD 742
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
S N+RIQ F+PDG+F+ FG G G G+ G+ + + LV
Sbjct: 743 SHNHRIQKFSPDGKFMGQFGTEGFGPGQLNMPVGITMDTAATGLV 787
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 108/220 (49%), Gaps = 15/220 (6%)
Query: 48 RGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------FTWP 100
+GS G +PR IA+ + VAD N+R+Q P D K F P
Sbjct: 563 KGSANGQLKYPRNIAIDSQGLVYVADRDNNRIQKFSP--DGKFVSQFGTEGSGPGQLDIP 620
Query: 101 RGIAVGPDNS--IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
GI + + + V++ N+R+ VF SDG FV KFGS G+ Q +P +A
Sbjct: 621 IGITIDTTATGLVYVSEGGNNRISVFTSDGVFVSKFGSYGSNIDQFNNPSGLAFDKDGFF 680
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGK----FGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ D H+ +++ F + K FGS G+ GQ ++P+ IA+ + V V
Sbjct: 681 FICDFITHKDHKYNLIADSFTKHKEALEKSLIPFGSRGSANGQFKYPNDIAIDSQGLVYV 740
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
+DS+NHR+Q F +G+ + FG+EG GQL P G+ +D
Sbjct: 741 TDSHNHRIQKFSPDGKFMGQFGTEGFGPGQLNMPVGITMD 780
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 100/195 (51%), Gaps = 20/195 (10%)
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+ GQL++P IA+ + V V+D +N+R+Q F DG FV +FG+ G+ GQ
Sbjct: 564 GSANGQLKYPRNIAIDSQGLVYVADRDNNRIQ-------KFSPDGKFVSQFGTEGSGPGQ 616
Query: 198 LEHPHYIAVSNTNR--VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD 255
L+ P I + T V VS+ N+R+ +F +G ++ FGS GS Q P G+A D
Sbjct: 617 LDIPIGITIDTTATGLVYVSEGGNNRISVFTSDGVFVSKFGSYGSNIDQFNNPSGLAFDK 676
Query: 256 QGY------ISVGDSGNNRI-QIFTPDGQFLRA----FGCWGSGDGEFKGLEGVAVMSNG 304
G+ I+ D N I FT + L FG GS +G+FK +A+ S G
Sbjct: 677 DGFFFICDFITHKDHKYNLIADSFTKHKEALEKSLIPFGSRGSANGQFKYPNDIAIDSQG 736
Query: 305 NILVCDRENHRIQVF 319
+ V D NHRIQ F
Sbjct: 737 LVYVTDSHNHRIQKF 751
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
+S +GS GQLK+PR +A+D QG + V D NNRIQ F+PDG+F+ FG GSG G+
Sbjct: 558 SSTSCKGSANGQLKYPRNIAIDSQGLVYVADRDNNRIQKFSPDGKFVSQFGTEGSGPGQL 617
Query: 293 KGLEGVAV--MSNGNILVCDRENHRIQVF 319
G+ + + G + V + N+RI VF
Sbjct: 618 DIPIGITIDTTATGLVYVSEGGNNRISVF 646
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVAD---SSNHRVQVCFPHFDLKTNCVFLA---- 96
K GS GS F P G+A D + D +H+ + F + +
Sbjct: 655 KFGSYGSNIDQFNNPSGLAFDKDGFFFICDFITHKDHKYNLIADSFTKHKEALEKSLIPF 714
Query: 97 ---------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHP 147
F +P IA+ + V DS NHR+Q F DG F+G+FG+ G GQL P
Sbjct: 715 GSRGSANGQFKYPNDIAIDSQGLVYVTDSHNHRIQKFSPDGKFMGQFGTEGFGPGQLNMP 774
>gi|312376141|gb|EFR23321.1| hypothetical protein AND_13105 [Anopheles darlingi]
Length = 1034
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 125/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ +AV T+
Sbjct: 777 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVRTS 836
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V + R++V
Sbjct: 837 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ANILQHPRGVTVDSKGRIVV 884
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD +G V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 885 VECKVMRVIIFDQSGNVLQKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 940
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQFLR G G+G GV + + G IL+ D N+
Sbjct: 941 EGQFLRQIG----GEGVTNYPIGVGINAAGEILIADNHNN 976
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 150/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 752 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 807
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 808 GRFKFQFGECGKRDGQLLYPNRVAVVRTSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 864
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V + R++V + RV IFD +G V Q KFG + L
Sbjct: 865 --ANILQHPRGVTVDSKGRIVVVECKVMRVIIFDQSGNVLQ-------KFGC----SKHL 911
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G
Sbjct: 912 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQFLRQIGGEGVT----NYPIGVGINAAGE 967
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 968 ILIADNHNNFNLTIFTQDGQLVSAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 1020
Query: 316 IQVF 319
+ ++
Sbjct: 1021 LYIY 1024
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
+VS +I + +F ++ + + KFG G GQ P +AV+ N
Sbjct: 730 SVSTAAAMIDLSAKLMSTSMFPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQN 789
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA-VDDQGYISVGD-SGNNR 268
+IV+D+NNHR+QIFD GR FG G +GQL +P VA V G I V + S ++
Sbjct: 790 DIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVRTSGDIIVTERSPTHQ 849
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
IQI+ GQF+R FG + GV V S G I+V + + R+ +F
Sbjct: 850 IQIYNQYGQFVRKFGA-----NILQHPRGVTVDSKGRIVVVECKVMRVIIF 895
>gi|328709507|ref|XP_003243980.1| PREDICTED: b-box type zinc finger protein ncl-1-like [Acyrthosiphon
pisum]
Length = 879
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 123/220 (55%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-T 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ +AV +
Sbjct: 622 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVKPS 681
Query: 156 NRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP I V N R++V
Sbjct: 682 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ANILQHPRGITVDNKGRIVV 729
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD G V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 730 VECKVMRVIIFDQAGNVLVKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 785
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G + GV + ++G IL+ D N+
Sbjct: 786 EGQYLRQIGSQGITNYPI----GVGINASGEILIADNHNN 821
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 154/304 (50%), Gaps = 46/304 (15%)
Query: 31 PRSQYLQKRRL-QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ + + + K G G+ G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 597 PKSQIKRHKMIYHCKFGEFGAMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 652
Query: 90 TNCVFL---------AFTWPRGIA-VGPDNSIVVAD-SSNHRVQVFQSDGTFVGKFGSMG 138
F +P +A V P I+V + S H++Q++ G FV KFG
Sbjct: 653 GRFKFQFGECGKRDGQLLYPNRVAVVKPSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 709
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP I V N R++V + RV IFD G V + KFG + L
Sbjct: 710 --ANILQHPRGITVDNKGRIVVVECKVMRVIIFDQAGNV-------LVKFGC----SKHL 756
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G+ + GS+G +P GV ++ G
Sbjct: 757 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGSQGIT----NYPIGVGINASGE 812
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT +GQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 813 ILIADNHNNFNLTIFTQEGQLVSAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 865
Query: 316 IQVF 319
+ ++
Sbjct: 866 LYIY 869
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 87/172 (50%), Gaps = 7/172 (4%)
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
+ + N + ++ S IF ++ + + KFG G GQ P +AV+
Sbjct: 574 LTIDNNDSILDLSSKLFTASIFPPKSQIKRHKMIYHCKFGEFGAMEGQFTEPSGVAVNAQ 633
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA-VDDQGYISVGD-SGNN 267
N +IV+D+NNHR+QIFD GR FG G +GQL +P VA V G I V + S +
Sbjct: 634 NDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVKPSGDIIVTERSPTH 693
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+IQI+ GQF+R FG + G+ V + G I+V + + R+ +F
Sbjct: 694 QIQIYNQYGQFVRKFGA-----NILQHPRGITVDNKGRIVVVECKVMRVIIF 740
>gi|170027758|ref|XP_001841764.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167862334|gb|EDS25717.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 396
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 120/241 (49%), Gaps = 9/241 (3%)
Query: 87 DLKTNCVFLAFTWPRGIAVG-PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE 145
D+ + +P I + V+D H + VF ++GTF+ + G++ G+L
Sbjct: 156 DVMQRVSYDKMVYPNAITFDQKSKEVFVSDKWKHCIFVFSAEGTFLRQLCEKGDQEGRLR 215
Query: 146 HPHYIAVSNTNRVIVSDSNNHRVQ-IFDVNGRVF------QSDGTFVGKFGSMGNKAGQL 198
P +A + + V D+ N RVQ I GR+ Q + + L
Sbjct: 216 APEGLATGPSGTLFVCDTGNDRVQCISSTTGRMLSQFGRIQKEQLLKASQTKTPTRHVDL 275
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
+ P +A+ N + VIV DS N RV+IF+ G I FG GS GQ ++P +AVD G+
Sbjct: 276 KCPTDVAIYN-DTVIVLDSGNRRVKIFNKRGEQIREFGQIGSLPGQFQYPEVMAVDPSGF 334
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
I VGD GN RI ++ P GQF+ A G G G+F L G+ V + I++ D +NH +QV
Sbjct: 335 ILVGDGGNARILVYQPSGQFVTAMGSRGDSPGKFNWLTGLFVGKDREIIISDNKNHTVQV 394
Query: 319 F 319
F
Sbjct: 395 F 395
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 27/201 (13%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-------------------CFP 84
++ +G + G P G+A GP ++ V D+ N RVQ
Sbjct: 203 QLCEKGDQEGRLRAPEGLATGPSGTLFVCDTGNDRVQCISSTTGRMLSQFGRIQKEQLLK 262
Query: 85 HFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQL 144
KT + P +A+ D +++V DS N RV++F G + +FG +G+ GQ
Sbjct: 263 ASQTKTPTRHVDLKCPTDVAIYND-TVIVLDSGNRRVKIFNKRGEQIREFGQIGSLPGQF 321
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYI 204
++P +AV + ++V D N R+ V+Q G FV GS G+ G+ +
Sbjct: 322 QYPEVMAVDPSGFILVGDGGNARI-------LVYQPSGQFVTAMGSRGDSPGKFNWLTGL 374
Query: 205 AVSNTNRVIVSDSNNHRVQIF 225
V +I+SD+ NH VQ+F
Sbjct: 375 FVGKDREIIISDNKNHTVQVF 395
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Query: 24 IGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF 83
+ Q G + Q L+ Q K +R + C P +A+ D +++V DS N RV++
Sbjct: 249 LSQFGRIQKEQLLKAS--QTKTPTRHVDLKC---PTDVAIYND-TVIVLDSGNRRVKIFN 302
Query: 84 PHFDL-----KTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
+ + + F +P +AV P I+V D N R+ V+Q G FV GS G
Sbjct: 303 KRGEQIREFGQIGSLPGQFQYPEVMAVDPSGFILVGDGGNARILVYQPSGQFVTAMGSRG 362
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
+ G+ + V +I+SD+ NH VQ+F
Sbjct: 363 DSPGKFNWLTGLFVGKDREIIISDNKNHTVQVF 395
>gi|156370149|ref|XP_001628334.1| predicted protein [Nematostella vectensis]
gi|156215308|gb|EDO36271.1| predicted protein [Nematostella vectensis]
Length = 796
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 108/178 (60%), Gaps = 12/178 (6%)
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P G+A P ++I VADS N R+Q+F +G ++ K S QL P +A++
Sbjct: 627 CFNLPHGVATDPSDNIYVADSGNSRLQIFTPEGYYMRKVVS-----DQLNRPWGVAITPR 681
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+++ +D NNH+V +F NG++ F FGS G+ G+ +P I + + + +V+
Sbjct: 682 GQIVTTDYNNHKVFVFHRNGKL-----DFC--FGSRGDGDGEFNNPAGITIDSDGQFVVA 734
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
D +NHRVQIF +G +T FG +G+ +G ++FP GVAVD G++ V D+ NNRIQ+F+
Sbjct: 735 DRSNHRVQIFQPDGTFVTKFGGKGTGDGLMRFPTGVAVDKAGHLYVADTFNNRIQVFS 792
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 103/190 (54%), Gaps = 12/190 (6%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
FV FG G G PH +A ++ + V+DS N R+QIF +G ++ K
Sbjct: 614 FVKSFGIAGGGDGCFNLPHGVATDPSDNIYVADSGNSRLQIF-------TPEGYYMRKVV 666
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
S QL P +A++ +++ +D NNH+V +F NG++ FGS G +G+ P
Sbjct: 667 S-----DQLNRPWGVAITPRGQIVTTDYNNHKVFVFHRNGKLDFCFGSRGDGDGEFNNPA 721
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
G+ +D G V D N+R+QIF PDG F+ FG G+GDG + GVAV G++ V
Sbjct: 722 GITIDSDGQFVVADRSNHRVQIFQPDGTFVTKFGGKGTGDGLMRFPTGVAVDKAGHLYVA 781
Query: 310 DRENHRIQVF 319
D N+RIQVF
Sbjct: 782 DTFNNRIQVF 791
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 97/188 (51%), Gaps = 7/188 (3%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
R G G GCF P G+A P ++I VADS N R+Q+ P V
Sbjct: 613 RFVKSFGIAGGGDGCFNLPHGVATDPSDNIYVADSGNSRLQIFTPEGYYMRKVVSDQLNR 672
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+A+ P IV D +NH+V VF +G FGS G+ G+ +P I + + + +
Sbjct: 673 PWGVAITPRGQIVTTDYNNHKVFVFHRNGKLDFCFGSRGDGDGEFNNPAGITIDSDGQFV 732
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHRVQIF Q DGTFV KFG G G + P +AV + V+D+ N
Sbjct: 733 VADRSNHRVQIF-------QPDGTFVTKFGGKGTGDGLMRFPTGVAVDKAGHLYVADTFN 785
Query: 220 HRVQIFDV 227
+R+Q+F +
Sbjct: 786 NRIQVFSL 793
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 59/135 (43%), Gaps = 42/135 (31%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR------ 280
++ R + SFG G +G P GVA D I V DSGN+R+QIFTP+G ++R
Sbjct: 610 LSCRFVKSFGIAGGGDGCFNLPHGVATDPSDNIYVADSGNSRLQIFTPEGYYMRKVVSDQ 669
Query: 281 ------------------------------------AFGCWGSGDGEFKGLEGVAVMSNG 304
FG G GDGEF G+ + S+G
Sbjct: 670 LNRPWGVAITPRGQIVTTDYNNHKVFVFHRNGKLDFCFGSRGDGDGEFNNPAGITIDSDG 729
Query: 305 NILVCDRENHRIQVF 319
+V DR NHR+Q+F
Sbjct: 730 QFVVADRSNHRVQIF 744
>gi|260782668|ref|XP_002586406.1| hypothetical protein BRAFLDRAFT_252550 [Branchiostoma floridae]
gi|229271513|gb|EEN42417.1| hypothetical protein BRAFLDRAFT_252550 [Branchiostoma floridae]
Length = 684
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 141/282 (50%), Gaps = 28/282 (9%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV--FLAFTWP 100
IG +GSE G F P G+AV D ++VAD N RVQV FD+ + F +
Sbjct: 423 LTIGKKGSEDGDFDNPIGLAVYEDK-LIVADGHNERVQV----FDVNGTHLSSFPTSAFT 477
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
+G+AV D +I+V ++ V +F S G F G + P+ +AV +++
Sbjct: 478 KGVAVDKDGNIIV--TAGQEVMIFTSSGQLQRTFTH-----GDFDIPYGVAVDGDGHIVM 530
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
D + H V +FD N R+ + K G GN G +P+++ V N +IVSD NH
Sbjct: 531 VDRDAHCVFLFDFNCRLIR-------KMGVEGNGLGCFNYPNFVTVDTENNIIVSDLRNH 583
Query: 221 RVQIFDVNGRVITSFGSEGS--EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
R Q FD G + G +G E+G+L FP G+AVD +G + + + NR+++ DG
Sbjct: 584 RAQGFDQEGNLKFQIGHKGLDIEQGELNFPTGIAVDAEGNVVMAELSGNRLKVMRSDGID 643
Query: 279 LRAFGCWGSGDGE-FKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ C S DG+ GVAV +G + V D NH I+ +
Sbjct: 644 V----CTISSDGDKLNKPHGVAVTEDGFVFVADSGNHCIKKY 681
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---- 95
RL K+G G+ GCF +P + V +N+I+V+D NHR Q FD + N F
Sbjct: 546 RLIRKMGVEGNGLGCFNYPNFVTVDTENNIIVSDLRNHRAQ----GFDQEGNLKFQIGHK 601
Query: 96 -------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
+P GIAV + ++V+A+ S +R++V +SDG V S G+K L PH
Sbjct: 602 GLDIEQGELNFPTGIAVDAEGNVVMAELSGNRLKVMRSDGIDVCTISSDGDK---LNKPH 658
Query: 149 YIAVSNTNRVIVSDSNNHRVQIF 171
+AV+ V V+DS NH ++ +
Sbjct: 659 GVAVTEDGFVFVADSGNHCIKKY 681
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 37 QKRRLQFKIGSRGS--EPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Q+ L+F+IG +G E G +P GIAV + ++V+A+ S +R++V D C
Sbjct: 590 QEGNLKFQIGHKGLDIEQGELNFPTGIAVDAEGNVVMAELSGNRLKVM--RSDGIDVCTI 647
Query: 95 LA----FTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P G+AV D + VADS NH ++ ++
Sbjct: 648 SSDGDKLNKPHGVAVTEDGFVFVADSGNHCIKKYK 682
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ + G +GSE+G P G+AV + I V D N R+Q+F +G L +F
Sbjct: 422 VLTIGKKGSEDGDFDNPIGLAVYEDKLI-VADGHNERVQVFDVNGTHLSSFPTSAF---- 476
Query: 292 FKGLEGVAVMSNGNILV 308
+GVAV +GNI+V
Sbjct: 477 ---TKGVAVDKDGNIIV 490
>gi|148654532|ref|YP_001274737.1| NHL repeat-containing protein [Roseiflexus sp. RS-1]
gi|148566642|gb|ABQ88787.1| NHL repeat containing protein [Roseiflexus sp. RS-1]
Length = 1030
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 117/221 (52%), Gaps = 10/221 (4%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSS 117
P +A+ + + VAD + RVQ+ P T L P G+A+GP+ + VAD+
Sbjct: 473 PDDLALDANGRVYVADRWHGRVQIYNPDGSYYTTVSGLDC--PGGVAIGPNGYLYVADTC 530
Query: 118 NHRVQVFQSDGTFVGKFGSMGNKAGQLEH---PHYIAVSNTNRVIVSDSNNHRVQIFDVN 174
NH V+++ ++ V G+ G H P +AV + + VSD NHR+Q+F+ N
Sbjct: 531 NHTVKIYNTNLVLVATLGTPGESGTDNAHFNSPEDVAVDSNGTIYVSDGGNHRIQVFNAN 590
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
+ ++ +G+ G G+ P+ + V + NR+ V D NHR+Q+FD NG +T+
Sbjct: 591 RQYVRT----MGETGIWGSDFAHFNGPNNLFVDSANRLYVGDEWNHRIQVFDANGAYLTT 646
Query: 235 F-GSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
GS G GQ + RGVAVD+ G I V D N+RIQ F P
Sbjct: 647 IGGSAGPRTGQFRGARGVAVDNAGNIYVADRLNHRIQKFAP 687
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 128/277 (46%), Gaps = 26/277 (9%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTW---------PRGIAVG 106
P +AV PD SI + + HR+ P + W P +A+
Sbjct: 420 PSSVAVAPDGSIYLTEDKGHRLVKLRPDGTPIWIVGAAGVKGDWDASNDRLNNPDDLALD 479
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
+ + VAD + RVQ++ DG++ L+ P +A+ + V+D+ NH
Sbjct: 480 ANGRVYVADRWHGRVQIYNPDGSYY-------TTVSGLDCPGGVAIGPNGYLYVADTCNH 532
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
V+I++ N + + +G G G P +AV + + VSD NHR+Q+F+
Sbjct: 533 TVKIYNTNLVLVAT----LGTPGESGTDNAHFNSPEDVAVDSNGTIYVSDGGNHRIQVFN 588
Query: 227 VNGRVITSFGSEG---SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
N + + + G G S+ P + VD + VGD N+RIQ+F +G +L G
Sbjct: 589 ANRQYVRTMGETGIWGSDFAHFNGPNNLFVDSANRLYVGDEWNHRIQVFDANGAYLTTIG 648
Query: 284 -CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+F+G GVAV + GNI V DR NHRIQ F
Sbjct: 649 GSAGPRTGQFRGARGVAVDNAGNIYVADRLNHRIQKF 685
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 144/348 (41%), Gaps = 83/348 (23%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA----FTW 99
+ G GS F PR IA+ N + V D++N+RVQ+ + + ++A
Sbjct: 251 QTGVCGSANNQFCGPRHIAI-YGNELYVPDANNNRVQIF--NISNPASPSYVATIGGLNN 307
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQS-DGTFVGKF-GSMGNKAGQLEHPHYIAVSNTN- 156
P G+AV DN I +AD+ N+R+Q + D ++G G G+ Q +P +
Sbjct: 308 PSGVAV-DDNFIYIADTWNNRIQTYTRIDRVYIGTIGGEWGSGNNQFRNPTDVVAMTIGT 366
Query: 157 ------RVIVSDSNNHRVQIFDV------------------------------------- 173
+ V+D N RVQ F +
Sbjct: 367 YPNAELHLFVADFVNTRVQQFKITSISPFAFQYVRTYGTTGVPYVTDGYHYNTPSSVAVA 426
Query: 174 -NGRVF------------QSDGTFVGKFGSMGNKA------GQLEHPHYIAVSNTNRVIV 214
+G ++ + DGT + G+ G K +L +P +A+ RV V
Sbjct: 427 PDGSIYLTEDKGHRLVKLRPDGTPIWIVGAAGVKGDWDASNDRLNNPDDLALDANGRVYV 486
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+D + RVQI++ +G T+ L P GVA+ GY+ V D+ N+ ++I+
Sbjct: 487 ADRWHGRVQIYNPDGSYYTTVSG-------LDCPGGVAIGPNGYLYVADTCNHTVKIYNT 539
Query: 275 DGQFLRAFGC---WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ + G G+ + F E VAV SNG I V D NHRIQVF
Sbjct: 540 NLVLVATLGTPGESGTDNAHFNSPEDVAVDSNGTIYVSDGGNHRIQVF 587
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 42/250 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSS--------NHRVQVFQSDGTF---VGKFGSMGNKAGQLE 145
F +P +A +I V+D + NHR+QVF+SDGT+ +G+ G G+ Q
Sbjct: 204 FAYPISVAFDASGNIYVSDGAPWWNREGGNHRIQVFRSDGTYLATLGQTGVCGSANNQFC 263
Query: 146 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
P +IA+ N + V D+NN+RVQIF+++ S +V G + N +G +A
Sbjct: 264 GPRHIAIYG-NELYVPDANNNRVQIFNISNPASPS---YVATIGGLNNPSG-------VA 312
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRV-ITSFGSE-GSEEGQLKFPRGVAVDDQG------ 257
V + N + ++D+ N+R+Q + RV I + G E GS Q + P V G
Sbjct: 313 VDD-NFIYIADTWNNRIQTYTRIDRVYIGTIGGEWGSGNNQFRNPTDVVAMTIGTYPNAE 371
Query: 258 -YISVGDSGNNRIQIFTPDG------QFLRAFGCWG---SGDG-EFKGLEGVAVMSNGNI 306
++ V D N R+Q F Q++R +G G DG + VAV +G+I
Sbjct: 372 LHLFVADFVNTRVQQFKITSISPFAFQYVRTYGTTGVPYVTDGYHYNTPSSVAVAPDGSI 431
Query: 307 LVCDRENHRI 316
+ + + HR+
Sbjct: 432 YLTEDKGHRL 441
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 123/297 (41%), Gaps = 87/297 (29%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG------------------ 138
+P GI V NSI + + +R + SDG F FG G
Sbjct: 104 LNYPYGIGV-EGNSIWIGEMWGNRFLKYASDGNFQQSFGHAGFAEDYTDTSFWEIADVAT 162
Query: 139 -------------------NKAGQ-----------------LEHPHYIAVSNTNRVIVSD 162
N +G+ +P +A + + VSD
Sbjct: 163 DSDGNIWVVDAASSRVVKLNSSGKALLTLGKRWESGSDNNRFAYPISVAFDASGNIYVSD 222
Query: 163 --------SNNHRVQIFDVNGRVFQSDGTF---VGKFGSMGNKAGQLEHPHYIAVSNTNR 211
NHR+Q VF+SDGT+ +G+ G G+ Q P +IA+ N
Sbjct: 223 GAPWWNREGGNHRIQ-------VFRSDGTYLATLGQTGVCGSANNQFCGPRHIAIYG-NE 274
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
+ V D+NN+RVQIF+++ S+ + G L P GVAVDD +I + D+ NNRIQ
Sbjct: 275 LYVPDANNNRVQIFNISNPASPSY---VATIGGLNNPSGVAVDDN-FIYIADTWNNRIQT 330
Query: 272 FTP-DGQFLRAFGC-WGSGDGEFKGLEGVAVMSNG-------NILVCDRENHRIQVF 319
+T D ++ G WGSG+ +F+ V M+ G ++ V D N R+Q F
Sbjct: 331 YTRIDRVYIGTIGGEWGSGNNQFRNPTDVVAMTIGTYPNAELHLFVADFVNTRVQQF 387
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 116/301 (38%), Gaps = 58/301 (19%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV------------ 93
G G++ F P +AV + +I V+D NHR+QV F+ V
Sbjct: 551 GESGTDNAHFNSPEDVAVDSNGTIYVSDGGNHRIQV----FNANRQYVRTMGETGIWGSD 606
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKF-GSMGNKAGQLEHPHYIAV 152
F F P + V N + V D NHR+QVF ++G ++ GS G + GQ +AV
Sbjct: 607 FAHFNGPNNLFVDSANRLYVGDEWNHRIQVFDANGAYLTTIGGSAGPRTGQFRGARGVAV 666
Query: 153 SNTNRVIVSDSNNHRVQIF----------DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
N + V+D NHR+Q F ++NG D TFV G G L
Sbjct: 667 DNAGNIYVADRLNHRIQKFAPGVPGWKQVNING-FGNRDTTFVSTLDVFG---GYL---- 718
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ----GY 258
Y ++ +D G S+ +P AV D Y
Sbjct: 719 YAGTWSSQMWRTAD-------------------GQTWSQVAPSTWPTDTAVFDAEPFGSY 759
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
+ VG + NN +I+ +G G G G+ +AV SN E+ +Q+
Sbjct: 760 LYVGTASNNGGEIWRTNGITWEQVITSGFGITNNYGINTLAVFSNAIYAATSAEDGVMQI 819
Query: 319 F 319
+
Sbjct: 820 Y 820
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 43/100 (43%), Gaps = 18/100 (18%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q R + G GS+ F P + V N + V D NHR+QV FD N +L
Sbjct: 592 QYVRTMGETGIWGSDFAHFNGPNNLFVDSANRLYVGDEWNHRIQV----FD--ANGAYLT 645
Query: 97 ------------FTWPRGIAVGPDNSIVVADSSNHRVQVF 124
F RG+AV +I VAD NHR+Q F
Sbjct: 646 TIGGSAGPRTGQFRGARGVAVDNAGNIYVADRLNHRIQKF 685
>gi|89899075|ref|YP_521546.1| NHL repeat-containing protein [Rhodoferax ferrireducens T118]
gi|89343812|gb|ABD68015.1| NHL repeat protein [Rhodoferax ferrireducens T118]
Length = 343
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 118/236 (50%), Gaps = 11/236 (4%)
Query: 38 KRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF 97
K R +G G P +A+G + + DS+ +V V P + T
Sbjct: 111 KARYDLIVGEGGQ---ALPSPVALALGSAGEVYLTDSNRAQVLVIQPGAAMATPLALPDM 167
Query: 98 TWPRGIAVGPDN-SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
P GIA N ++ V D+ HRV VF+ DGT V FG+ G+ AGQ +P I
Sbjct: 168 AQPTGIAFDKSNGNLYVVDTGAHRVNVFKPDGTLVFSFGARGDGAGQFNYPTMIWFDRGG 227
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
R+ V+DS N R+Q+F NG+ ++ FG +G+ G P +A + V V D
Sbjct: 228 RLYVTDSLNFRIQMFSRNGK-------YLSGFGQVGDGLGDNIRPKSVATDSHGHVYVVD 280
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+ ++ +QIFDV GR + S GS G++ G+ P G+ +D+ I + DS N R+Q+F
Sbjct: 281 ALHNALQIFDVLGRYLLSVGSIGNDRGEFWLPAGIFIDENDLIYIADSYNQRVQVF 336
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 124/266 (46%), Gaps = 17/266 (6%)
Query: 59 RGIAVGPDNSIV-VADSSN---HRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVA 114
R +AV +N +V VAD HR +DL A P +A+G + +
Sbjct: 83 RPLAVVTNNGVVFVADPGANGVHRFDQTKARYDLIVGEGGQALPSPVALALGSAGEVYLT 142
Query: 115 DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSNNHRVQIFDV 173
DS+ +V V Q + P IA +N + V D+ HRV
Sbjct: 143 DSNRAQVLVIQPGAAMATPLA-----LPDMAQPTGIAFDKSNGNLYVVDTGAHRVN---- 193
Query: 174 NGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT 233
VF+ DGT V FG+ G+ AGQ +P I R+ V+DS N R+Q+F NG+ ++
Sbjct: 194 ---VFKPDGTLVFSFGARGDGAGQFNYPTMIWFDRGGRLYVTDSLNFRIQMFSRNGKYLS 250
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
FG G G P+ VA D G++ V D+ +N +QIF G++L + G G+ GEF
Sbjct: 251 GFGQVGDGLGDNIRPKSVATDSHGHVYVVDALHNALQIFDVLGRYLLSVGSIGNDRGEFW 310
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + N I + D N R+QVF
Sbjct: 311 LPAGIFIDENDLIYIADSYNQRVQVF 336
>gi|307171164|gb|EFN63151.1| Brain tumor protein [Camponotus floridanus]
Length = 853
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ +AV T+
Sbjct: 596 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVKTS 655
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V + R++V
Sbjct: 656 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ANILQHPRGVTVDSKGRIVV 703
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD G V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 704 VECKVMRVIIFDQTGNVLQKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 759
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+G +LR G G+G GV + ++G IL+ D N+
Sbjct: 760 EGAYLRQIG----GEGITNYPIGVGINTHGEILIADNHNN 795
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 571 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 626
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 627 GRFKFQFGECGKRDGQLLYPNRVAVVKTSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 683
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V + R++V + RV IFD G V Q KFG + L
Sbjct: 684 --ANILQHPRGVTVDSKGRIVVVECKVMRVIIFDQTGNVLQ-------KFGC----SKHL 730
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G + G EG +P GV ++ G
Sbjct: 731 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGAYLRQIGGEGIT----NYPIGVGINTHGE 786
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 787 ILIADNHNNFNLTIFTQDGQLVSAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 839
Query: 316 IQVF 319
+ ++
Sbjct: 840 LYIY 843
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
IF ++ + + KFG G GQ P +AV+ N +IV+D+NNHR+QIFD G
Sbjct: 568 IFPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG 627
Query: 230 RVITSFGSEGSEEGQLKFPRGVA-VDDQGYISVGD-SGNNRIQIFTPDGQFLRAFGCWGS 287
R FG G +GQL +P VA V G I V + S ++IQI+ GQF+R FG
Sbjct: 628 RFKFQFGECGKRDGQLLYPNRVAVVKTSGDIIVTERSPTHQIQIYNQYGQFVRKFGA--- 684
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ GV V S G I+V + + R+ +F
Sbjct: 685 --NILQHPRGVTVDSKGRIVVVECKVMRVIIF 714
>gi|443731537|gb|ELU16635.1| hypothetical protein CAPTEDRAFT_22788, partial [Capitella teleta]
Length = 792
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 119/219 (54%), Gaps = 22/219 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT- 155
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ +AV T
Sbjct: 539 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVRTS 598
Query: 156 -NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ V+ S H+VQI++ G+ FV KFG A L+HP + V + R+I+
Sbjct: 599 GDIVVTERSPTHQVQIYNQYGQ-------FVRKFG-----ASILQHPRGVTVDDKGRIII 646
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD G V+ FG L+FP GV V+D+ I + D+ + +++F+
Sbjct: 647 VECKVMRVIIFDQMGNVLQKFGC----SKHLEFPNGVVVNDKEEIFISDNRAHCVKVFSY 702
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
G FLR G G+G GV + + G IL+ D N
Sbjct: 703 QGAFLRQIG----GEGITNYPIGVGINAAGEILIADNHN 737
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 145/304 (47%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 514 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 569
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + +V S H+VQ++ G FV KFG
Sbjct: 570 GRFKFQFGECGKRDGQLLYPNRVAVVRTSGDIVVTERSPTHQVQIYNQYGQFVRKFG--- 626
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V + R+I+ + RV IFD G V Q KFG + L
Sbjct: 627 --ASILQHPRGVTVDDKGRIIIVECKVMRVIIFDQMGNVLQ-------KFGC----SKHL 673
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F G + G EG +P GV ++ G
Sbjct: 674 EFPNGVVVNDKEEIFISDNRAHCVKVFSYQGAFLRQIGGEGI----TNYPIGVGINAAGE 729
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + FT DGQ + A + + K + VA+M G+I++ ++ +R
Sbjct: 730 ILIADNHNNFNLTTFTQDGQLVSAL------ESKVKHAQCFDVALMDEGSIVLASKD-YR 782
Query: 316 IQVF 319
+ ++
Sbjct: 783 LYIY 786
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 109/211 (51%), Gaps = 18/211 (8%)
Query: 111 IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
++ A+ + Q+ + + KFG G GQ P +AV+ N +IV+D+NNHR+QI
Sbjct: 506 LITANIYPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI 565
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT--NRVIVSDSNNHRVQIFDVN 228
FD GR F +FG G + GQL +P+ +AV T + V+ S H+VQI++
Sbjct: 566 FDKEGR-------FKFQFGECGKRDGQLLYPNRVAVVRTSGDIVVTERSPTHQVQIYNQY 618
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G+ + FG+ L+ PRGV VDD+G I + + R+ IF G L+ FGC S
Sbjct: 619 GQFVRKFGA-----SILQHPRGVTVDDKGRIIIVECKVMRVIIFDQMGNVLQKFGC--SK 671
Query: 289 DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
EF GV V I + D H ++VF
Sbjct: 672 HLEFPN--GVVVNDKEEIFISDNRAHCVKVF 700
>gi|357612662|gb|EHJ68108.1| hypothetical protein KGM_01207 [Danaus plexippus]
Length = 844
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 124/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ +AV T+
Sbjct: 587 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVRTS 646
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R++V
Sbjct: 647 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ANILQHPRGVTVDNKGRIVV 694
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD G V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 695 VECKVMRVIIFDQVGNVLQKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 750
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+G +LR G G+G GV + ++G IL+ D N+
Sbjct: 751 EGIYLRQIG----GEGVTNYPIGVGINASGEILIADNHNN 786
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 562 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 617
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 618 GRFKFQFGECGKRDGQLLYPNRVAVVRTSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 674
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R++V + RV IFD G V Q KFG + L
Sbjct: 675 --ANILQHPRGVTVDNKGRIVVVECKVMRVIIFDQVGNVLQ-------KFGC----SKHL 721
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G + G EG +P GV ++ G
Sbjct: 722 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGIYLRQIGGEGVT----NYPIGVGINASGE 777
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 778 ILIADNHNNFNLTIFTQDGQLVSAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 830
Query: 316 IQVF 319
+ ++
Sbjct: 831 LYIY 834
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 89/176 (50%), Gaps = 8/176 (4%)
Query: 147 PHYIAVSNTNRVIVSDSNNH-RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
P+ + + N I+ +N IF ++ + + KFG G GQ P +A
Sbjct: 535 PYSLTAAAHNDPILDLTNKLISTAIFPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVA 594
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA-VDDQGYISVGD- 263
V+ N +IV+D+NNHR+QIFD GR FG G +GQL +P VA V G I V +
Sbjct: 595 VNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVRTSGDIIVTER 654
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
S ++IQI+ GQF+R FG + GV V + G I+V + + R+ +F
Sbjct: 655 SPTHQIQIYNQYGQFVRKFGA-----NILQHPRGVTVDNKGRIVVVECKVMRVIIF 705
>gi|242005236|ref|XP_002423477.1| B-box type zinc finger protein ncl-1, putative [Pediculus humanus
corporis]
gi|212506565|gb|EEB10739.1| B-box type zinc finger protein ncl-1, putative [Pediculus humanus
corporis]
Length = 826
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 126/220 (57%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ +AV T+
Sbjct: 569 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVRTS 628
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V N R++V
Sbjct: 629 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ANILQHPRGVTVDNKGRIVV 676
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD +G V+ FG L+FP GV V+D+ I + D+ + +++F+
Sbjct: 677 VECKVMRVIIFDQSGNVLQKFGC----SKYLEFPNGVVVNDKKEIFISDNRAHCVKVFSY 732
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+G +LR G G+G GV + + G+IL+ D N+
Sbjct: 733 EGVYLRQIG----GEGVTNYPIGVGINAAGDILIADNHNN 768
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 151/316 (47%), Gaps = 47/316 (14%)
Query: 20 LVSGIGQVGTTPRSQYLQKRRLQF--KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNH 77
L S + P +++ ++ + K G G G FT P G+AV N I+VAD++NH
Sbjct: 532 LTSKLMSTAIFPPKSQIKRHKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNH 591
Query: 78 RVQVCFPHFDLKTNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQS 126
R+Q+ FD + F +P +AV + IV S H++Q++
Sbjct: 592 RIQI----FDKEGRFKFQFGECGKRDGQLLYPNRVAVVRTSGDIIVTERSPTHQIQIYNQ 647
Query: 127 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVG 186
G FV KFG A L+HP + V N R++V + RV IFD +G V Q
Sbjct: 648 YGQFVRKFG-----ANILQHPRGVTVDNKGRIVVVECKVMRVIIFDQSGNVLQ------- 695
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
KFG + LE P+ + V++ + +SD+ H V++F G + G EG
Sbjct: 696 KFGC----SKYLEFPNGVVVNDKKEIFISDNRAHCVKVFSYEGVYLRQIGGEGVT----N 747
Query: 247 FPRGVAVDDQGYISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSN 303
+P GV ++ G I + D+ NN + IFT DG + A + + K + VA+M +
Sbjct: 748 YPIGVGINAAGDILIADNHNNFNLTIFTQDGHLVSAL------ESKVKHAQCFDVALMDD 801
Query: 304 GNILVCDRENHRIQVF 319
G++++ ++ +R+ ++
Sbjct: 802 GSVVLASKD-YRLYIY 816
>gi|241672147|ref|XP_002411459.1| xnf7, putative [Ixodes scapularis]
gi|215504110|gb|EEC13604.1| xnf7, putative [Ixodes scapularis]
Length = 701
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 121/220 (55%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV--SN 154
FT P G+AV N IVVAD++NHR+Q+F +G F +FG G + GQL +P+ +AV +
Sbjct: 450 FTEPSGVAVNAQNDIVVADTNNHRIQIFDREGRFKFQFGECGKRDGQLLYPNRVAVVRQS 509
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ V+ S H++QI++ G+ FV KFG++ L+HP +AV RV+V
Sbjct: 510 GDIVVTERSPTHQIQIYNQYGQ-------FVRKFGAV-----ILQHPRGVAVDPKGRVVV 557
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD G V+ FG L+FP GV V+D+ I + D+ + +++F+
Sbjct: 558 VECKVMRVIIFDQGGNVLQKFGC----SKHLEFPNGVVVNDRQEIFISDNRAHCVKVFSY 613
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
DG FLR G G+G GV + G ILV D N+
Sbjct: 614 DGNFLRQIG----GEGLTNYPIGVCMNQGGEILVADNHNN 649
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 159/320 (49%), Gaps = 48/320 (15%)
Query: 16 LQTLLVSGIGQVGTTPRSQYLQKRRLQF--KIGSRGSEPGCFTWPRGIAVGPDNSIVVAD 73
L + +SG G VG P ++++++ + K G G G FT P G+AV N IVVAD
Sbjct: 410 LSSKYLSGSG-VGLYPLKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIVVAD 468
Query: 74 SSNHRVQVCFPHFDLKTNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQ 122
++NHR+Q+ FD + F +P +AV + +V S H++Q
Sbjct: 469 TNNHRIQI----FDREGRFKFQFGECGKRDGQLLYPNRVAVVRQSGDIVVTERSPTHQIQ 524
Query: 123 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDG 182
++ G FV KFG++ L+HP +AV RV+V + RV IFD G V Q
Sbjct: 525 IYNQYGQFVRKFGAV-----ILQHPRGVAVDPKGRVVVVECKVMRVIIFDQGGNVLQ--- 576
Query: 183 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
KFG + LE P+ + V++ + +SD+ H V++F +G + G EG
Sbjct: 577 ----KFGC----SKHLEFPNGVVVNDRQEIFISDNRAHCVKVFSYDGNFLRQIGGEGLT- 627
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVA 299
+P GV ++ G I V D+ NN + +FT DGQ + A + + K + VA
Sbjct: 628 ---NYPIGVCMNQGGEILVADNHNNFNVTVFTQDGQLVNAL------ESKVKHAQCFDVA 678
Query: 300 VMSNGNILVCDRENHRIQVF 319
+M +G++++ ++ +R+ V+
Sbjct: 679 LMDDGSVVLASKD-YRLYVY 697
>gi|260785740|ref|XP_002587918.1| hypothetical protein BRAFLDRAFT_87306 [Branchiostoma floridae]
gi|229273073|gb|EEN43929.1| hypothetical protein BRAFLDRAFT_87306 [Branchiostoma floridae]
Length = 764
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 144/287 (50%), Gaps = 39/287 (13%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTW 99
G GS+PG F +P G+ V P + I VAD N RVQV HF
Sbjct: 501 GGEGSKPGKFQYPCGVVVLPSDEIFVADYCNKRVQVHSTEGVYLRHFPTVVPGTGDKDME 560
Query: 100 PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY---IAVS 153
P + + + ++ V +++ H VQ + +DGT + F L++ Y IAV
Sbjct: 561 PLDVCMDGNGTLWVVGRGETAEHVVQ-YSTDGTAMAGF--------DLKNSSYYRGIAVD 611
Query: 154 -NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
TN+++V+D + VQ VF+ DG+ V ++ + G++ PHY+ V +
Sbjct: 612 MRTNQILVTDRDKGAVQ-------VFRPDGSLVR---TVRHPRGEMTRPHYVTVDREGNI 661
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+VSD + H V ++D +G+ + FG EGS EGQL P G+ D GYI V D GN R+QIF
Sbjct: 662 LVSDWDTHFVYVYDESGKFLFQFGGEGSGEGQLSDPLGICTDSSGYILVADYGNERVQIF 721
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
T G+F+R GS EG+AV G ++V + N+ + V+
Sbjct: 722 TRHGEFVRTVRT-GSNP------EGLAVGPEGQLVVINSLNNTVTVY 761
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 58/233 (24%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI----------------------- 170
FG G+K G+ ++P + V ++ + V+D N RVQ+
Sbjct: 500 FGGEGSKPGKFQYPCGVVVLPSDEIFVADYCNKRVQVHSTEGVYLRHFPTVVPGTGDKDM 559
Query: 171 ------FDVNGRV--------------FQSDGTFVGKFGSMGNKAGQLEHPHY---IAVS 207
D NG + + +DGT + F L++ Y IAV
Sbjct: 560 EPLDVCMDGNGTLWVVGRGETAEHVVQYSTDGTAMAGF--------DLKNSSYYRGIAVD 611
Query: 208 -NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
TN+++V+D + VQ+F +G ++ + G++ P V VD +G I V D
Sbjct: 612 MRTNQILVTDRDKGAVQVFRPDGSLVRTV---RHPRGEMTRPHYVTVDREGNILVSDWDT 668
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ + ++ G+FL FG GSG+G+ G+ S+G ILV D N R+Q+F
Sbjct: 669 HFVYVYDESGKFLFQFGGEGSGEGQLSDPLGICTDSSGYILVADYGNERVQIF 721
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
D+ V+T FG EGS+ G+ ++P GV V I V D N R+Q+ + +G +LR F
Sbjct: 492 DLKPSVVT-FGGEGSKPGKFQYPCGVVVLPSDEIFVADYCNKRVQVHSTEGVYLRHFPTV 550
Query: 286 --GSGDGEFKGLEGVAVMSNGNILVCDR 311
G+GD + + L+ V + NG + V R
Sbjct: 551 VPGTGDKDMEPLD-VCMDGNGTLWVVGR 577
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G GS G + P GI I+VAD N RVQ+ H +
Sbjct: 674 YDESGKFLFQFGGEGSGEGQLSDPLGICTDSSGYILVADYGNERVQIFTRHGEFVRTV-- 731
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
+ P G+AVGP+ +VV +S N+ V V+
Sbjct: 732 RTGSNPEGLAVGPEGQLVVINSLNNTVTVY 761
>gi|427796251|gb|JAA63577.1| Putative vesicle coat complex copi beta' subunit, partial
[Rhipicephalus pulchellus]
Length = 836
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 120/219 (54%), Gaps = 22/219 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV--SN 154
FT P G+AV N IVVAD++NHR+Q+F +G F +FG G + GQL +P+ +AV +
Sbjct: 564 FTEPSGVAVNAQNDIVVADTNNHRIQIFDREGRFKFQFGECGKRDGQLLYPNRVAVVRQS 623
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ V+ S H++QI++ G+ FV KFG++ L+HP +AV RV+V
Sbjct: 624 GDIVVTERSPTHQIQIYNQYGQ-------FVRKFGAV-----ILQHPRGVAVDPKGRVVV 671
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD +G V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 672 VECKVMRVIIFDQSGNVLQKFGC----SKHLEFPNGVVVNDRQEIFISDNRAHCVKVFNY 727
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
DG FLR G G+G GV + G ILV D N
Sbjct: 728 DGVFLRQIG----GEGLTNYPIGVCMNQGGEILVADNHN 762
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 155/309 (50%), Gaps = 47/309 (15%)
Query: 27 VGTTPRSQYLQKRRLQF--KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP 84
VG P ++++++ + K G G G FT P G+AV N IVVAD++NHR+Q+
Sbjct: 534 VGLYPLKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIVVADTNNHRIQI--- 590
Query: 85 HFDLKTNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGK 133
FD + F +P +AV + +V S H++Q++ G FV K
Sbjct: 591 -FDREGRFKFQFGECGKRDGQLLYPNRVAVVRQSGDIVVTERSPTHQIQIYNQYGQFVRK 649
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG++ L+HP +AV RV+V + RV IFD +G V Q KFG
Sbjct: 650 FGAV-----ILQHPRGVAVDPKGRVVVVECKVMRVIIFDQSGNVLQ-------KFGC--- 694
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
+ LE P+ + V++ + +SD+ H V++F+ +G + G EG +P GV +
Sbjct: 695 -SKHLEFPNGVVVNDRQEIFISDNRAHCVKVFNYDGVFLRQIGGEGLT----NYPIGVCM 749
Query: 254 DDQGYISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCD 310
+ G I V D+ NN + +FT DGQ + A + + K + VA+M +G++++
Sbjct: 750 NQGGEILVADNHNNFNVTVFTQDGQLVNAL------ESKVKHAQCFDVALMDDGSVVLAS 803
Query: 311 RENHRIQVF 319
+ ++R+ V+
Sbjct: 804 K-DYRLYVY 811
>gi|322802767|gb|EFZ22979.1| hypothetical protein SINV_06575 [Solenopsis invicta]
Length = 861
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ +AV T+
Sbjct: 604 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVKTS 663
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V + R++V
Sbjct: 664 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ANILQHPRGVTVDSKGRIVV 711
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD G V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 712 VECKVMRVIIFDQTGNVLQKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 767
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+G +LR G G+G GV + ++G IL+ D N+
Sbjct: 768 EGAYLRQIG----GEGITNYPIGVGINTHGEILIADNHNN 803
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 579 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 634
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 635 GRFKFQFGECGKRDGQLLYPNRVAVVKTSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 691
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V + R++V + RV IFD G V Q KFG + L
Sbjct: 692 --ANILQHPRGVTVDSKGRIVVVECKVMRVIIFDQTGNVLQ-------KFGC----SKHL 738
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G + G EG +P GV ++ G
Sbjct: 739 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGAYLRQIGGEGIT----NYPIGVGINTHGE 794
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 795 ILIADNHNNFNLTIFTQDGQLVSAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 847
Query: 316 IQVF 319
+ ++
Sbjct: 848 LYIY 851
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
IF ++ + + KFG G GQ P +AV+ N +IV+D+NNHR+QIFD G
Sbjct: 576 IFPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG 635
Query: 230 RVITSFGSEGSEEGQLKFPRGVA-VDDQGYISVGD-SGNNRIQIFTPDGQFLRAFGCWGS 287
R FG G +GQL +P VA V G I V + S ++IQI+ GQF+R FG
Sbjct: 636 RFKFQFGECGKRDGQLLYPNRVAVVKTSGDIIVTERSPTHQIQIYNQYGQFVRKFGA--- 692
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ GV V S G I+V + + R+ +F
Sbjct: 693 --NILQHPRGVTVDSKGRIVVVECKVMRVIIF 722
>gi|332018296|gb|EGI58901.1| Brain tumor protein [Acromyrmex echinatior]
Length = 466
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ +AV T+
Sbjct: 209 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVKTS 268
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V + R++V
Sbjct: 269 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ANILQHPRGVTVDSKGRIVV 316
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD G V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 317 VECKVMRVIIFDQTGNVLQKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 372
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+G +LR G G+G GV + ++G IL+ D N+
Sbjct: 373 EGSYLRQIG----GEGITNYPIGVGINTHGEILIADNHNN 408
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 184 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 239
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 240 GRFKFQFGECGKRDGQLLYPNRVAVVKTSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 296
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V + R++V + RV IFD G V Q KFG + L
Sbjct: 297 --ANILQHPRGVTVDSKGRIVVVECKVMRVIIFDQTGNVLQ-------KFGC----SKHL 343
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G + G EG +P GV ++ G
Sbjct: 344 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGSYLRQIGGEGIT----NYPIGVGINTHGE 399
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 400 ILIADNHNNFNLTIFTQDGQLVSAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 452
Query: 316 IQVF 319
+ ++
Sbjct: 453 LYIY 456
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
IF ++ + + KFG G GQ P +AV+ N +IV+D+NNHR+QIFD G
Sbjct: 181 IFPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG 240
Query: 230 RVITSFGSEGSEEGQLKFPRGVA-VDDQGYISVGD-SGNNRIQIFTPDGQFLRAFGCWGS 287
R FG G +GQL +P VA V G I V + S ++IQI+ GQF+R FG
Sbjct: 241 RFKFQFGECGKRDGQLLYPNRVAVVKTSGDIIVTERSPTHQIQIYNQYGQFVRKFGA--- 297
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ GV V S G I+V + + R+ +F
Sbjct: 298 --NILQHPRGVTVDSKGRIVVVECKVMRVIIF 327
>gi|149174344|ref|ZP_01852971.1| hypothetical protein PM8797T_03319 [Planctomyces maris DSM 8797]
gi|148846889|gb|EDL61225.1| hypothetical protein PM8797T_03319 [Planctomyces maris DSM 8797]
Length = 340
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 145/304 (47%), Gaps = 35/304 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV--FLAFTWPRGI 103
G +G +PG F +P +A+ + I V D N RVQ FD N + F P G+
Sbjct: 38 GQQGDQPGEFHFPIDLAINASDEIFVTDHLNDRVQ----KFDRTGNLLAQFPVLPNPGGL 93
Query: 104 AVGPDNSIVVAD-----SSNH----RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
A+ ++V+A SS H R+ ++ G + ++G G G+ P IAV++
Sbjct: 94 ALDKQGNLVLAHIVASGSSRHKSGDRISIYSPQGKLIRQWGKPGKGPGEFNCPGGIAVAD 153
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA---GQLEHPHYIAVSNTNR 211
R+ ++D NHRVQ+FD G+ G + + G G KA ++ P ++A +
Sbjct: 154 NGRIYIADQTNHRVQVFDPTGQFLFEWGKYGSQPGEFGGKASPNSRVGGPQFLAFDSEGN 213
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQ---------------LKFPRGVAVDDQ 256
+ ++ N RVQ F G+++ +G++ G L P V +D +
Sbjct: 214 LWTTEGANCRVQQFTAEGKLLKYWGTDADARGGLGGYFSGFDGKPVKILTGPIAVCIDQK 273
Query: 257 GYISVGDSGNNRIQIFTPDGQFLRAFGC-WGSGDGEFKGLEGVAVMSNGNILVCDRENHR 315
+ + + + R+Q F+P G++LR FG G+ G+F G+A S G++ V D NHR
Sbjct: 274 DRLWI-SAVSGRVQQFSPAGKYLRGFGMEQGTAPGQFYAPHGMAFDSKGHLYVVDAYNHR 332
Query: 316 IQVF 319
IQ F
Sbjct: 333 IQKF 336
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 114/245 (46%), Gaps = 31/245 (12%)
Query: 85 HFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQL 144
H+ L T C ++ +SI+ +++ + Q TF+ +G G++ G+
Sbjct: 4 HWLLYTLCFLIS------------HSILPVVAADEKPQT----ATFLKTWGQQGDQPGEF 47
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYI 204
P +A++ ++ + V+D N RVQ FD G + G +K G L H +
Sbjct: 48 HFPIDLAINASDEIFVTDHLNDRVQKFDRTGNLLAQFPVLPNPGGLALDKQGNLVLAHIV 107
Query: 205 AVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDS 264
A S ++R D R+ I+ G++I +G G G+ P G+AV D G I + D
Sbjct: 108 A-SGSSRHKSGD----RISIYSPQGKLIRQWGKPGKGPGEFNCPGGIAVADNGRIYIADQ 162
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG----------VAVMSNGNILVCDRENH 314
N+R+Q+F P GQFL +G +GS GEF G +A S GN+ + N
Sbjct: 163 TNHRVQVFDPTGQFLFEWGKYGSQPGEFGGKASPNSRVGGPQFLAFDSEGNLWTTEGANC 222
Query: 315 RIQVF 319
R+Q F
Sbjct: 223 RVQQF 227
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 107/250 (42%), Gaps = 42/250 (16%)
Query: 33 SQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC 92
S Y + +L + G G PG F P GIAV + I +AD +NHRVQV P
Sbjct: 121 SIYSPQGKLIRQWGKPGKGPGEFNCPGGIAVADNGRIYIADQTNHRVQVFDP------TG 174
Query: 93 VFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
FL F W + G+ G+FG + ++ P ++A
Sbjct: 175 QFL-FEWGK-------------------------YGSQPGEFGGKASPNSRVGGPQFLAF 208
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM--------GNKAGQLEHPHYI 204
+ + ++ N RVQ F G++ + GT G + G L P +
Sbjct: 209 DSEGNLWTTEGANCRVQQFTAEGKLLKYWGTDADARGGLGGYFSGFDGKPVKILTGPIAV 268
Query: 205 AVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSE-GSEEGQLKFPRGVAVDDQGYISVGD 263
+ +R+ +S + RVQ F G+ + FG E G+ GQ P G+A D +G++ V D
Sbjct: 269 CIDQKDRLWISAVSG-RVQQFSPAGKYLRGFGMEQGTAPGQFYAPHGMAFDSKGHLYVVD 327
Query: 264 SGNNRIQIFT 273
+ N+RIQ F
Sbjct: 328 AYNHRIQKFA 337
>gi|91086483|ref|XP_970457.1| PREDICTED: similar to CG15105 CG15105-PA [Tribolium castaneum]
gi|270009807|gb|EFA06255.1| hypothetical protein TcasGA2_TC009114 [Tribolium castaneum]
Length = 621
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 120/224 (53%), Gaps = 9/224 (4%)
Query: 97 FTWPRGIAVGPD-NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
+P+GIA I V+D H + VF ++ S GN G++ P IAV
Sbjct: 406 MLYPQGIAFSKTRQEIYVSDKWKHCIHVFSKSRDYLRDLLSKGNGPGKVRSPDGIAVGPG 465
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+ +++ DS N R+ I + G + G++GNK L P +A+S +++IV+
Sbjct: 466 DELVICDSGNDRIIIIN------PQTGEHISTIGTVGNKT-TLNMPTGVAMSG-DKIIVA 517
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D+ NHR++IF ++GR + FG+ G +GQ + VAVD G+I VGD GN R+QIF PD
Sbjct: 518 DTGNHRIKIFYLDGRKLHEFGALGRGKGQFRSAEVVAVDSAGFILVGDGGNGRVQIFKPD 577
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G + FG G F + G+ V S+ +I+V D + ++++
Sbjct: 578 GSVAKIFGGSSQGSDGFGWVSGICVTSDLDIVVADSKTRSLRIY 621
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 13/184 (7%)
Query: 47 SRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV-----FLAFTWPR 101
S+G+ PG P GIAVGP + +V+ DS N R+ + P + + P
Sbjct: 446 SKGNGPGKVRSPDGIAVGPGDELVICDSGNDRIIIINPQTGEHISTIGTVGNKTTLNMPT 505
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
G+A+ D I+VAD+ NHR+++F DG + +FG++G GQ +AV + ++V
Sbjct: 506 GVAMSGDK-IIVADTGNHRIKIFYLDGRKLHEFGALGRGKGQFRSAEVVAVDSAGFILVG 564
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
D N RVQI F+ DG+ FG + I V++ ++V+DS
Sbjct: 565 DGGNGRVQI-------FKPDGSVAKIFGGSSQGSDGFGWVSGICVTSDLDIVVADSKTRS 617
Query: 222 VQIF 225
++I+
Sbjct: 618 LRIY 621
>gi|389798577|ref|ZP_10201591.1| NHL repeat containing protein [Rhodanobacter sp. 116-2]
gi|388444739|gb|EIM00836.1| NHL repeat containing protein [Rhodanobacter sp. 116-2]
Length = 322
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 148/327 (45%), Gaps = 38/327 (11%)
Query: 14 FLLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVAD 73
L+ LV G G V Y RL GS GS PG F P GIAV D+ + VAD
Sbjct: 1 MLIVAGLVIGFGFVPKAKEPPY----RLVTSWGSAGSAPGQFDGPNGIAVA-DHRVYVAD 55
Query: 74 SSNHRVQV--CFPHF--DLKTNCV-FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDG 128
S NHR+Q+ HF D+ L P + V D + V D N VQV+ DG
Sbjct: 56 SVNHRIQIFDSQGHFLSDIAVGAQGLLPQARPMNLNVAGDK-LYVGDYWNDAVQVYTLDG 114
Query: 129 TFVGKFG-SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK 187
+ G G+ GQ P + ++V+D N RVQ+ GR F+ +
Sbjct: 115 RLLSTLGGQQGSAPGQFRAPGGASAEPDGTIVVADFYNQRVQMLSPQGR-------FIRQ 167
Query: 188 FGSMGNKA----GQLEHPHYIAVSNTN-RVIVSDSNNHRVQIFDVNGRVITSFGSE---- 238
G G+K G +P +AVS +N V+D N R+Q+FD +GR + +G
Sbjct: 168 IGITGHKGYVAGGSFNYPMDVAVSPSNGHFYVADGYNDRIQVFDRDGRFLRMWGGPFGLH 227
Query: 239 --------GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
G G + P +A+ QG + V D NNRIQ FT DG+FL AF G
Sbjct: 228 LPASINFLGGLRGWFRTPTSIAIGPQGEVFVADQENNRIQKFTADGRFLTAFDQPPRAPG 287
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQ 317
G+ VAV ++G++ V D + ++
Sbjct: 288 --YGVGAVAVTADGDVYVTDLADQHVE 312
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 112/240 (46%), Gaps = 25/240 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P GIAV D+ + VADS NHR+Q+F S G F+ P + V+ +
Sbjct: 38 FDGPNGIAVA-DHRVYVADSVNHRIQIFDSQGHFLSDIAVGAQGLLPQARPMNLNVAG-D 95
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++ V D N VQ++ ++GR+ + G G G+ GQ P + ++V+D
Sbjct: 96 KLYVGDYWNDAVQVYTLDGRLLSTLG------GQQGSAPGQFRAPGGASAEPDGTIVVAD 149
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEE----GQLKFPRGVAVD-DQGYISVGDSGNNRIQI 271
N RVQ+ GR I G G + G +P VAV G+ V D N+RIQ+
Sbjct: 150 FYNQRVQMLSPQGRFIRQIGITGHKGYVAGGSFNYPMDVAVSPSNGHFYVADGYNDRIQV 209
Query: 272 FTPDGQFLRAFG------------CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F DG+FLR +G G G F+ +A+ G + V D+EN+RIQ F
Sbjct: 210 FDRDGRFLRMWGGPFGLHLPASINFLGGLRGWFRTPTSIAIGPQGEVFVADQENNRIQKF 269
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 107/196 (54%), Gaps = 15/196 (7%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
V +GS G+ GQ + P+ IAV++ +RV V+DS NHR+QIFD G F SD VG G
Sbjct: 24 LVTSWGSAGSAPGQFDGPNGIAVAD-HRVYVADSVNHRIQIFDSQGH-FLSD-IAVGAQG 80
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG-SEGSEEGQLKFP 248
+ P + V+ +++ V D N VQ++ ++GR++++ G +GS GQ + P
Sbjct: 81 LLPQA-----RPMNLNVAG-DKLYVGDYWNDAVQVYTLDGRLLSTLGGQQGSAPGQFRAP 134
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGS----GDGEFKGLEGVAVM-SN 303
G + + G I V D N R+Q+ +P G+F+R G G G F VAV SN
Sbjct: 135 GGASAEPDGTIVVADFYNQRVQMLSPQGRFIRQIGITGHKGYVAGGSFNYPMDVAVSPSN 194
Query: 304 GNILVCDRENHRIQVF 319
G+ V D N RIQVF
Sbjct: 195 GHFYVADGYNDRIQVF 210
>gi|260785706|ref|XP_002587901.1| hypothetical protein BRAFLDRAFT_87289 [Branchiostoma floridae]
gi|229273056|gb|EEN43912.1| hypothetical protein BRAFLDRAFT_87289 [Branchiostoma floridae]
Length = 783
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 146/294 (49%), Gaps = 36/294 (12%)
Query: 38 KRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTN 91
K++ G + SEPG F PRG+ V P N I VAD +N RVQV HF
Sbjct: 511 KKQDVITFGGKVSEPGNFANPRGVMVSPSNEIFVADYNNRRVQVHSTEGVYLRHFPTVVP 570
Query: 92 CVFLAFTWPRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
P+ + + + ++ V ++ H VQ + +DGT + FG + +H
Sbjct: 571 GTGDKHMRPQDVCMDGNGTLWVVGGGKTAGHVVQ-YSTDGTAMAGFGL----STSYDHNR 625
Query: 149 YIAVS-NTNRVIVSDSNNHRVQIFDVNGR--VFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
IAV TN ++++D+ + G V++ D + V ++ + G++EHP Y+
Sbjct: 626 GIAVDMRTNHILITDA---------IQGALLVYRPDRSLVR---TVRHPEGEMEHPMYVT 673
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG 265
V ++VSD +H V ++D +G+ + FG EGS EGQL P G+ D G+I V DSG
Sbjct: 674 VDGEGNILVSDLISHYVYVYDESGKFLFQFGGEGSGEGQLTRPAGICTDSSGHILVADSG 733
Query: 266 NNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ R+QIFT +F+R F G G+AV G ++V + NH + V+
Sbjct: 734 HQRVQIFTSRSEFVRTFRTGF-------GPTGLAVGPEGQLVVTNDCNHTVTVY 780
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV- 93
Y + + F+ G GS G T P GI I+VADS + RVQ+ F ++ V
Sbjct: 693 YDESGKFLFQFGGEGSGEGQLTRPAGICTDSSGHILVADSGHQRVQI----FTSRSEFVR 748
Query: 94 -FLAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
F P G+AVGP+ +VV + NH V V+
Sbjct: 749 TFRTGFGPTGLAVGPEGQLVVTNDCNHTVTVY 780
>gi|324504947|gb|ADY42132.1| B-box type zinc finger protein ncl-1 [Ascaris suum]
Length = 800
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 120/220 (54%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT- 155
FT P G+AV N IVVAD++NHR+QVF +G F +FG G + GQL +P+ +AV+
Sbjct: 548 FTEPSGVAVNAQNDIVVADTNNHRIQVFDKEGRFKFQFGECGKRDGQLLYPNRVAVNRVT 607
Query: 156 -NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ ++ S H++QI++ G+ F+ KFG A L+HP + V N R+IV
Sbjct: 608 GDFIVTERSPTHQIQIYNQYGQ-------FLRKFG-----ANILQHPRGVCVDNKGRIIV 655
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD+ G ++ F S L+FP GV +D+ I + D+ + I++F
Sbjct: 656 IECKVMRVIIFDMFGNILQKF----SCSRYLEFPNGVCTNDKQEILISDNRAHCIKVFNY 711
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
DGQF R G G+G GV + S G ++V D N+
Sbjct: 712 DGQFARQIG----GEGITNYPIGVGINSAGEVVVADNHNN 747
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
PRSQ QK K G G G FT P G+AV N IVVAD++NHR+QV FD +
Sbjct: 523 PRSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIVVADTNNHRIQV----FDKE 578
Query: 90 TNCVFL---------AFTWPRGIAVG--PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G F+ KFG
Sbjct: 579 GRFKFQFGECGKRDGQLLYPNRVAVNRVTGDFIVTERSPTHQIQIYNQYGQFLRKFG--- 635
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+IV + RV IFD+ G + Q KF + L
Sbjct: 636 --ANILQHPRGVCVDNKGRIIVIECKVMRVIIFDMFGNILQ-------KFSC----SRYL 682
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + ++ +++SD+ H +++F+ +G+ G EG +P GV ++ G
Sbjct: 683 EFPNGVCTNDKQEILISDNRAHCIKVFNYDGQFARQIGGEGIT----NYPIGVGINSAGE 738
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
+ V D+ NN + +F+ DG L A + + K + VA++ +G++++ ++ +R
Sbjct: 739 VVVADNHNNFNLTVFSQDGTMLSAL------ESKVKHAQCFDVALVEDGSVVLASKD-YR 791
Query: 316 IQVF 319
+ ++
Sbjct: 792 LYLY 795
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 12/202 (5%)
Query: 125 QSDGTFV-GKFGSMGNKAGQ----LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ 179
QS GTF G + GN+ + L+ + ++++ + +D N ++ ++ +
Sbjct: 470 QSLGTFANGVDAAFGNQYEKWSMGLDPAGTLQLADSPDIDPADKNLGVNALYPPRSQIKR 529
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
+ KFG G GQ P +AV+ N ++V+D+NNHR+Q+FD GR FG G
Sbjct: 530 QKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIVVADTNNHRIQVFDKEGRFKFQFGECG 589
Query: 240 SEEGQLKFPRGVAVD--DQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
+GQL +P VAV+ +I S ++IQI+ GQFLR FG + G
Sbjct: 590 KRDGQLLYPNRVAVNRVTGDFIVTERSPTHQIQIYNQYGQFLRKFGA-----NILQHPRG 644
Query: 298 VAVMSNGNILVCDRENHRIQVF 319
V V + G I+V + + R+ +F
Sbjct: 645 VCVDNKGRIIVIECKVMRVIIF 666
>gi|307191898|gb|EFN75317.1| Brain tumor protein [Harpegnathos saltator]
Length = 737
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 123/220 (55%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ +AV T+
Sbjct: 480 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVKTS 539
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V + R++V
Sbjct: 540 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ATILQHPRGVTVDSKGRIVV 587
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD +G V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 588 VECKVMRVIIFDQSGNVLQKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 643
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
DG +LR G G+G GV + G IL+ D N+
Sbjct: 644 DGAYLRQIG----GEGVTNYPIGVGINGVGEILIADNHNN 679
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 151/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYLQKRRL-QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ + + + K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 455 PKSQIKRNKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 510
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 511 GRFKFQFGECGKRDGQLLYPNRVAVVKTSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 567
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V + R++V + RV IFD +G V Q KFG + L
Sbjct: 568 --ATILQHPRGVTVDSKGRIVVVECKVMRVIIFDQSGNVLQ-------KFGC----SKHL 614
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ +G + G EG +P GV ++ G
Sbjct: 615 EFPNGVVVNDKQEIFISDNRAHCVKVFNYDGAYLRQIGGEGVT----NYPIGVGINGVGE 670
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT +GQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 671 ILIADNHNNFNLTIFTQEGQLVSAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 723
Query: 316 IQVF 319
+ ++
Sbjct: 724 LYIY 727
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
IF ++ ++ + KFG G GQ P +AV+ N +IV+D+NNHR+QIFD G
Sbjct: 452 IFPPKSQIKRNKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG 511
Query: 230 RVITSFGSEGSEEGQLKFPRGVA-VDDQGYISVGD-SGNNRIQIFTPDGQFLRAFGCWGS 287
R FG G +GQL +P VA V G I V + S ++IQI+ GQF+R FG
Sbjct: 512 RFKFQFGECGKRDGQLLYPNRVAVVKTSGDIIVTERSPTHQIQIYNQYGQFVRKFGAT-- 569
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ GV V S G I+V + + R+ +F
Sbjct: 570 ---ILQHPRGVTVDSKGRIVVVECKVMRVIIF 598
>gi|428183101|gb|EKX51960.1| hypothetical protein GUITHDRAFT_62202, partial [Guillardia theta
CCMP2712]
Length = 168
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 85/132 (64%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
G G+ AG+L P IAV +IVSD+NNHRVQ+F +G+ + +FG G +EG+LKF
Sbjct: 1 IGRKGDGAGELNGPRGIAVDGEGNIIVSDTNNHRVQVFSKDGQQLRAFGRWGGKEGELKF 60
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P GVAVD G I V D+GN+R+Q+F+P G FLR G G+G GE + GVAV G +L
Sbjct: 61 PHGVAVDGAGNIVVADNGNHRLQLFSPSGSFLRVLGREGTGPGELERPVGVAVGEGGKVL 120
Query: 308 VCDRENHRIQVF 319
V D R+QV
Sbjct: 121 VTDWYKKRVQVL 132
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 100/179 (55%), Gaps = 13/179 (7%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
G G+ AG+L P IAV +IVSD+NNHRVQ+F +G+ ++ FG G
Sbjct: 1 IGRKGDGAGELNGPRGIAVDGEGNIIVSDTNNHRVQVFSKDGQQLRA-------FGRWGG 53
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
K G+L+ PH +AV ++V+D+ NHR+Q+F +G + G EG+ G+L+ P GVAV
Sbjct: 54 KEGELKFPHGVAVDGAGNIVVADNGNHRLQLFSPSGSFLRVLGREGTGPGELERPVGVAV 113
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCD 310
+ G + V D R+Q+ G ++ + G + + + GV+V GN+LVCD
Sbjct: 114 GEGGKVLVTDWYKKRVQVLDSAGGYVTSIGE----EAPVRPVRPVGVSVDGGGNVLVCD 168
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 93/164 (56%), Gaps = 9/164 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PRGIAV + +I+V+D++NHRVQVF DG + FG G K G+L+ PH +AV ++
Sbjct: 14 PRGIAVDGEGNIIVSDTNNHRVQVFSKDGQQLRAFGRWGGKEGELKFPHGVAVDGAGNIV 73
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ NHR+Q+ F G+F+ G G G+LE P +AV +V+V+D
Sbjct: 74 VADNGNHRLQL-------FSPSGSFLRVLGREGTGPGELERPVGVAVGEGGKVLVTDWYK 126
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
RVQ+ D G +TS G E + P GV+VD G + V D
Sbjct: 127 KRVQVLDSAGGYVTSIGEEAPV--RPVRPVGVSVDGGGNVLVCD 168
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV---------CFPHFDLKTNCVFL 95
IG +G G PRGIAV + +I+V+D++NHRVQV F + K
Sbjct: 1 IGRKGDGAGELNGPRGIAVDGEGNIIVSDTNNHRVQVFSKDGQQLRAFGRWGGKEG---- 56
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
+P G+AV +IVVAD+ NHR+Q+F G+F+ G G G+LE P +AV
Sbjct: 57 ELKFPHGVAVDGAGNIVVADNGNHRLQLFSPSGSFLRVLGREGTGPGELERPVGVAVGEG 116
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDG 182
+V+V+D RVQ+ D G S G
Sbjct: 117 GKVLVTDWYKKRVQVLDSAGGYVTSIG 143
>gi|352080848|ref|ZP_08951787.1| NHL repeat containing protein [Rhodanobacter sp. 2APBS1]
gi|351684129|gb|EHA67205.1| NHL repeat containing protein [Rhodanobacter sp. 2APBS1]
Length = 339
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 146/327 (44%), Gaps = 38/327 (11%)
Query: 14 FLLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVAD 73
L+ LV G G V Y RL GS GS PG F P GIAV D+ + VAD
Sbjct: 18 LLIVAGLVIGFGFVPKAKEPPY----RLVTSWGSAGSAPGQFDGPNGIAVA-DHRVYVAD 72
Query: 74 SSNHRVQVCFPHFDLKTNCV-----FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDG 128
S NHR+Q+ ++ L P + V D + V D N VQV+ DG
Sbjct: 73 SVNHRIQIFDSQGRFLSDIAVGAQGLLPQARPMNLNVAGDK-LYVGDYWNDAVQVYTLDG 131
Query: 129 TFVGKFG-SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK 187
+ G G+ GQ P + ++V+D N RVQ+ GR F+ +
Sbjct: 132 RLLSTLGGQQGSAPGQFRAPGGASAEPDGTIVVADFYNQRVQMLSPQGR-------FIRQ 184
Query: 188 FGSMGNKA----GQLEHPHYIAVSNTN-RVIVSDSNNHRVQIFDVNGRVITSFGSE---- 238
G G+K G +P +AVS +N V+D N R+Q+FD +GR + +G
Sbjct: 185 IGITGHKGYVAGGSFNYPMDVAVSPSNGHFYVADGYNDRIQVFDRDGRFLRMWGGPFGLH 244
Query: 239 --------GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
G G + P +A+ QG + V D NNRIQ FT DG+FL AF G
Sbjct: 245 LPASINFLGGLRGWFRTPTSIAIGPQGEVFVADQENNRIQKFTADGRFLTAFDQPPRAPG 304
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQ 317
G+ VAV ++G++ V D + ++
Sbjct: 305 --YGVGAVAVTADGDVYVTDLADQHVE 329
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 112/240 (46%), Gaps = 25/240 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P GIAV D+ + VADS NHR+Q+F S G F+ P + V+ +
Sbjct: 55 FDGPNGIAVA-DHRVYVADSVNHRIQIFDSQGRFLSDIAVGAQGLLPQARPMNLNVAG-D 112
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++ V D N VQ++ ++GR+ + G G G+ GQ P + ++V+D
Sbjct: 113 KLYVGDYWNDAVQVYTLDGRLLSTLG------GQQGSAPGQFRAPGGASAEPDGTIVVAD 166
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEE----GQLKFPRGVAVD-DQGYISVGDSGNNRIQI 271
N RVQ+ GR I G G + G +P VAV G+ V D N+RIQ+
Sbjct: 167 FYNQRVQMLSPQGRFIRQIGITGHKGYVAGGSFNYPMDVAVSPSNGHFYVADGYNDRIQV 226
Query: 272 FTPDGQFLRAFG------------CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F DG+FLR +G G G F+ +A+ G + V D+EN+RIQ F
Sbjct: 227 FDRDGRFLRMWGGPFGLHLPASINFLGGLRGWFRTPTSIAIGPQGEVFVADQENNRIQKF 286
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 108/196 (55%), Gaps = 15/196 (7%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
V +GS G+ GQ + P+ IAV++ +RV V+DS NHR+QIFD GR F SD VG G
Sbjct: 41 LVTSWGSAGSAPGQFDGPNGIAVAD-HRVYVADSVNHRIQIFDSQGR-FLSD-IAVGAQG 97
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG-SEGSEEGQLKFP 248
+ P + V+ +++ V D N VQ++ ++GR++++ G +GS GQ + P
Sbjct: 98 LLPQA-----RPMNLNVAG-DKLYVGDYWNDAVQVYTLDGRLLSTLGGQQGSAPGQFRAP 151
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGS----GDGEFKGLEGVAVM-SN 303
G + + G I V D N R+Q+ +P G+F+R G G G F VAV SN
Sbjct: 152 GGASAEPDGTIVVADFYNQRVQMLSPQGRFIRQIGITGHKGYVAGGSFNYPMDVAVSPSN 211
Query: 304 GNILVCDRENHRIQVF 319
G+ V D N RIQVF
Sbjct: 212 GHFYVADGYNDRIQVF 227
>gi|291224495|ref|XP_002732239.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 777
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 122/223 (54%), Gaps = 19/223 (8%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVG--KFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+ + + +++V D+ N+R+Q+F DG + KF + PHY A+S+
Sbjct: 447 PHGVIITRNRNVLVCDTGNNRLQIFTLDGNHLKSIKFTNFAKPFT----PHYSAISDDGY 502
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSD 216
+ +D NN +V + D NG++ + FGS +L+ P+ +A+S N V V+D
Sbjct: 503 IFTTDHNNKQVVVCDENGKLIRV-------FGS-----KELQSPYGVAISPINGNVYVTD 550
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+H V+I+ G +TSFGS G+ + Q P +A+ + G I V D NNRIQ+F +
Sbjct: 551 FRSHCVRIYSELGVYMTSFGSSGTGDSQFNKPWDIAIGNTGNIIVSDYSNNRIQVFDNNC 610
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ L FGC G+ +GE G GVA ++G + +CD N R+Q F
Sbjct: 611 RLLHVFGCQGNKEGEMNGPMGVATDTDGCVYICDYSNKRVQKF 653
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 133/262 (50%), Gaps = 30/262 (11%)
Query: 26 QVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH 85
++ P+ +L+K G G G P G+ + + +++V D+ N+R+Q+
Sbjct: 421 KINVIPKKGFLRK------FGENGLAVGQLRNPHGVIITRNRNVLVCDTGNNRLQI---- 470
Query: 86 FDLKTNCV-FLAFT------WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F L N + + FT P A+ D I D +N +V V +G + FGS
Sbjct: 471 FTLDGNHLKSIKFTNFAKPFTPHYSAISDDGYIFTTDHNNKQVVVCDENGKLIRVFGS-- 528
Query: 139 NKAGQLEHPHYIAVSNTN-RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
+L+ P+ +A+S N V V+D +H V R++ G ++ FGS G Q
Sbjct: 529 ---KELQSPYGVAISPINGNVYVTDFRSHCV-------RIYSELGVYMTSFGSSGTGDSQ 578
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
P IA+ NT +IVSD +N+R+Q+FD N R++ FG +G++EG++ P GVA D G
Sbjct: 579 FNKPWDIAIGNTGNIIVSDYSNNRIQVFDNNCRLLHVFGCQGNKEGEMNGPMGVATDTDG 638
Query: 258 YISVGDSGNNRIQIFTPDGQFL 279
+ + D N R+Q F P G+F+
Sbjct: 639 CVYICDYSNKRVQKFDPQGKFI 660
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 17/105 (16%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------- 95
GS G+ F P IA+G +I+V+D SN+R+QV FD NC L
Sbjct: 570 GSSGTGDSQFNKPWDIAIGNTGNIIVSDYSNNRIQV----FD--NNCRLLHVFGCQGNKE 623
Query: 96 -AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGN 139
P G+A D + + D SN RVQ F G F+ + ++ +
Sbjct: 624 GEMNGPMGVATDTDGCVYICDYSNKRVQKFDPQGKFIARIDNIED 668
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 16/100 (16%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG----- 286
+ FG G GQL+ P GV + + V D+GNNR+QIFT DG L++
Sbjct: 431 LRKFGENGLAVGQLRNPHGVIITRNRNVLVCDTGNNRLQIFTLDGNHLKSIKFTNFAKPF 490
Query: 287 -------SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
S DG + +N ++VCD I+VF
Sbjct: 491 TPHYSAISDDGYIFTTDH----NNKQVVVCDENGKLIRVF 526
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
P FLR FG G G+ + GV + N N+LVCD N+R+Q+F
Sbjct: 426 PKKGFLRKFGENGLAVGQLRNPHGVIITRNRNVLVCDTGNNRLQIF 471
>gi|350410056|ref|XP_003488931.1| PREDICTED: brain tumor protein-like [Bombus impatiens]
Length = 798
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 123/220 (55%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ +AV T+
Sbjct: 541 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVKTS 600
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V + R++V
Sbjct: 601 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ANILQHPRGVTVDSKGRIVV 648
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD G V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 649 VECKVMRVIIFDQTGNVLQKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 704
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+G +LR G G+G GV + + G IL+ D N+
Sbjct: 705 EGAYLRQIG----GEGITNYPIGVGINAVGEILIADNHNN 740
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 516 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 571
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 572 GRFKFQFGECGKRDGQLLYPNRVAVVKTSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 628
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V + R++V + RV IFD G V Q KFG + L
Sbjct: 629 --ANILQHPRGVTVDSKGRIVVVECKVMRVIIFDQTGNVLQ-------KFGC----SKHL 675
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G + G EG +P GV ++ G
Sbjct: 676 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGAYLRQIGGEGIT----NYPIGVGINAVGE 731
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 732 ILIADNHNNFNLTIFTQDGQLVSAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 784
Query: 316 IQVF 319
+ ++
Sbjct: 785 LYIY 788
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
IF ++ + + KFG G GQ P +AV+ N +IV+D+NNHR+QIFD G
Sbjct: 513 IFPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG 572
Query: 230 RVITSFGSEGSEEGQLKFPRGVA-VDDQGYISVGD-SGNNRIQIFTPDGQFLRAFGCWGS 287
R FG G +GQL +P VA V G I V + S ++IQI+ GQF+R FG
Sbjct: 573 RFKFQFGECGKRDGQLLYPNRVAVVKTSGDIIVTERSPTHQIQIYNQYGQFVRKFGA--- 629
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ GV V S G I+V + + R+ +F
Sbjct: 630 --NILQHPRGVTVDSKGRIVVVECKVMRVIIF 659
>gi|260785782|ref|XP_002587939.1| hypothetical protein BRAFLDRAFT_87327 [Branchiostoma floridae]
gi|229273094|gb|EEN43950.1| hypothetical protein BRAFLDRAFT_87327 [Branchiostoma floridae]
Length = 857
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 140/292 (47%), Gaps = 45/292 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ------VCFPHFDLKTNCVFLA 96
G +GSEPG F PRG+ V P N I VAD SN RVQ V HF
Sbjct: 593 MTFGRKGSEPGEFHHPRGVVVSPSNDIFVADMSNKRVQVHTTEGVYLRHFPTVVPGTADK 652
Query: 97 FTWPRGIAVGPDNSIVVAD---SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY---I 150
P + + + ++ V S+ H VQ + +DG +G F LE Y I
Sbjct: 653 DMGPHDVCMDGNGTLWVVGEGGSAEHVVQ-YSTDGIAMGGF--------HLEEIGYFRGI 703
Query: 151 AVS-NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
AV TN ++V+D++ V VF+ DG+ V ++ + ++ P Y+ V
Sbjct: 704 AVDMRTNHILVTDAHQGAVH-------VFRPDGSLVR---TVQHPREEMRRPRYVTVDGN 753
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
+VSD + HRV ++D +G+ + FG EGS EGQ+ FP G+ D G+I V D GN R+
Sbjct: 754 --FLVSDRDTHRVYVYDESGKFLFQFGGEGSGEGQMSFPHGICTDSSGHILVADYGNERV 811
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGL--EGVAVMSNGNILVCDRENHRIQVF 319
QIFT G+F+R G EG+AV G ++V +H + V+
Sbjct: 812 QIFTRHGEFVRTV---------HPGFNPEGLAVGPEGQLVVTSHFDHTVTVY 854
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G GS G ++P GI I+VAD N RVQ+ H + V
Sbjct: 767 YDESGKFLFQFGGEGSGEGQMSFPHGICTDSSGHILVADYGNERVQIFTRHGEF-VRTVH 825
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
F P G+AVGP+ +VV +H V V+
Sbjct: 826 PGFN-PEGLAVGPEGQLVVTSHFDHTVTVY 854
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGC--WGSGD 289
+ +FG +GSE G+ PRGV V I V D N R+Q+ T +G +LR F G+ D
Sbjct: 592 VMTFGRKGSEPGEFHHPRGVVVSPSNDIFVADMSNKRVQVHTTEGVYLRHFPTVVPGTAD 651
Query: 290 GEFKGLEGVAVMSNGNILVC 309
+ G V + NG + V
Sbjct: 652 KDM-GPHDVCMDGNGTLWVV 670
>gi|321479229|gb|EFX90185.1| brain tumor-like protein [Daphnia pulex]
Length = 731
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 123/220 (55%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ ++V T+
Sbjct: 474 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVSVVKTS 533
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ F KFG A L+HP + V + R+IV
Sbjct: 534 GDIIVTERSPTHQIQIYNQYGQ-------FARKFG-----ANVLQHPRGVTVDSKGRIIV 581
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD G V+ FG L+FP GV V+D+ I + D+ + +++F+
Sbjct: 582 VECKVMRVIIFDQMGNVLHKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFSY 637
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+G FLR G G+G GV + S G IL+ D N+
Sbjct: 638 EGVFLRQIG----GEGLTNYPIGVGINSAGEILIADNHNN 673
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 145/304 (47%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
PRSQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 449 PRSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 504
Query: 90 TNCVFL---------AFTWPRGIAVGPDNS--IVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P ++V + IV S H++Q++ G F KFG
Sbjct: 505 GRFKFQFGECGKRDGQLLYPNRVSVVKTSGDIIVTERSPTHQIQIYNQYGQFARKFG--- 561
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V + R+IV + RV IFD G V KFG + L
Sbjct: 562 --ANVLQHPRGVTVDSKGRIIVVECKVMRVIIFDQMGNVLH-------KFGC----SKHL 608
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F G + G EG +P GV ++ G
Sbjct: 609 EFPNGVVVNDKQEIFISDNRAHCVKVFSYEGVFLRQIGG----EGLTNYPIGVGINSAGE 664
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA++ +G++++ ++ +R
Sbjct: 665 ILIADNHNNFNLTIFTQDGQLISAL------ESKVKHAQCFDVALLDDGSVVLASKD-YR 717
Query: 316 IQVF 319
+ V+
Sbjct: 718 LYVY 721
>gi|405958381|gb|EKC24514.1| B-box type zinc finger protein ncl-1 [Crassostrea gigas]
Length = 1216
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 119/219 (54%), Gaps = 22/219 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV--SN 154
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ +AV ++
Sbjct: 511 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVKAS 570
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ ++ S H++QI++ G+ FV KFG A L+HP + V N R+++
Sbjct: 571 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ANILQHPRGVTVDNKGRIVI 618
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD G VI FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 619 VECKVMRVIIFDQFGNVIHKFGC----SKHLEFPNGVVVNDKEEIFISDNRAHCVKVFNY 674
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
G FLR G G+G GV + S G ILV D N
Sbjct: 675 QGVFLRQIG----GEGITNYPIGVGINSAGEILVADNHN 709
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 153/305 (50%), Gaps = 48/305 (15%)
Query: 31 PRSQYLQKRRLQF--KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL 88
P+SQ L+++++ + K G G G FT P G+AV N I+VAD++NHR+Q+ FD
Sbjct: 486 PKSQ-LKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDK 540
Query: 89 KTNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
+ F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 541 EGRFKFQFGECGKRDGQLLYPNRVAVVKASGDIIVTERSPTHQIQIYNQYGQFVRKFG-- 598
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
A L+HP + V N R+++ + RV IFD G V + KFG +
Sbjct: 599 ---ANILQHPRGVTVDNKGRIVIVECKVMRVIIFDQFGNV-------IHKFGC----SKH 644
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
LE P+ + V++ + +SD+ H V++F+ G + G EG +P GV ++ G
Sbjct: 645 LEFPNGVVVNDKEEIFISDNRAHCVKVFNYQGVFLRQIGGEGIT----NYPIGVGINSAG 700
Query: 258 YISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENH 314
I V D+ NN + IFT DGQ + A + + K + V++M +G++++ ++ +
Sbjct: 701 EILVADNHNNFNLTIFTQDGQLINAL------ESKVKHAQCFDVSLMDDGSVVLASKD-Y 753
Query: 315 RIQVF 319
R+ ++
Sbjct: 754 RLYIY 758
>gi|345480937|ref|XP_003424249.1| PREDICTED: B-box type zinc finger protein ncl-1-like [Nasonia
vitripennis]
Length = 899
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 123/220 (55%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ +AV T+
Sbjct: 642 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVRTS 701
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V + R++V
Sbjct: 702 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ANILQHPRGVTVDSKGRIVV 749
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD G V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 750 VECKVMRVIIFDQAGNVLQKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 805
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+G +LR G G+G GV + + G IL+ D N+
Sbjct: 806 EGSYLRQIG----GEGITNYPIGVGINAAGEILIADNHNN 841
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 144/297 (48%), Gaps = 45/297 (15%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL- 95
QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD + F
Sbjct: 624 QKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKEGRFKFQF 679
Query: 96 --------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE 145
+P +AV + IV S H++Q++ G FV KFG A L+
Sbjct: 680 GECGKRDGQLLYPNRVAVVRTSGDIIVTERSPTHQIQIYNQYGQFVRKFG-----ANILQ 734
Query: 146 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
HP + V + R++V + RV IFD G V Q KFG + LE P+ +
Sbjct: 735 HPRGVTVDSKGRIVVVECKVMRVIIFDQAGNVLQ-------KFGC----SKHLEFPNGVV 783
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG 265
V++ + +SD+ H V++F+ G + G EG +P GV ++ G I + D+
Sbjct: 784 VNDKQEIFISDNRAHCVKVFNYEGSYLRQIGGEGIT----NYPIGVGINAAGEILIADNH 839
Query: 266 NN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHRIQVF 319
NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R+ ++
Sbjct: 840 NNFNLTIFTQDGQLVSAL------ESKVKHAQCFDVALMDDGSVVLASKD-YRLYIY 889
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
IF + ++ + + KFG G GQ P +AV+ N +IV+D+NNHR+QIFD G
Sbjct: 614 IFPLKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG 673
Query: 230 RVITSFGSEGSEEGQLKFPRGVA-VDDQGYISVGD-SGNNRIQIFTPDGQFLRAFGCWGS 287
R FG G +GQL +P VA V G I V + S ++IQI+ GQF+R FG
Sbjct: 674 RFKFQFGECGKRDGQLLYPNRVAVVRTSGDIIVTERSPTHQIQIYNQYGQFVRKFGA--- 730
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ GV V S G I+V + + R+ +F
Sbjct: 731 --NILQHPRGVTVDSKGRIVVVECKVMRVIIF 760
>gi|260785716|ref|XP_002587906.1| hypothetical protein BRAFLDRAFT_87294 [Branchiostoma floridae]
gi|229273061|gb|EEN43917.1| hypothetical protein BRAFLDRAFT_87294 [Branchiostoma floridae]
Length = 809
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 137/270 (50%), Gaps = 26/270 (9%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTW 99
G GSEPG F++ RG+ V P N I VAD N RVQV HF
Sbjct: 546 GGEGSEPGKFSYRRGVVVSPSNEIYVADGGNRRVQVHNTEGVYLRHFPTVVPGTGDKDME 605
Query: 100 PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 155
P G+ + + ++ V ++++H VQ + +DGT + +F ++ + IAV T
Sbjct: 606 PHGVCMDGNGTLWVVGQGETADHVVQ-YSTDGTVMARF-----DLKKIGYCRGIAVDMRT 659
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
N ++V+D ++ V VF+ DG+ V ++ + G++ HP Y+ V ++VS
Sbjct: 660 NHILVTDPDHGAVH-------VFRPDGSLVR---TVRHPRGEMTHPQYVTVDGEGNILVS 709
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D H V ++D G+ + FG EGS EGQ+ P G+ D G+I V D GN R+QIFT
Sbjct: 710 DWGTHCVYVYDEPGKFLFQFGGEGSGEGQMIGPYGICTDSSGHILVADYGNERVQIFTRH 769
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
G+F+R +G G EG V+++ +
Sbjct: 770 GEFVRTVRTGFLPEGLTVGPEGQLVVTSSD 799
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 118/228 (51%), Gaps = 21/228 (9%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE-HPHYIAVSNT 155
F++ RG+ V P N I VAD N RVQV ++G ++ F ++ G + PH + +
Sbjct: 555 FSYRRGVVVSPSNEIYVADGGNRRVQVHNTEGVYLRHFPTVVPGTGDKDMEPHGVCMDGN 614
Query: 156 NRVIV---SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNR 211
+ V ++ +H VQ + +DGT + +F ++ + IAV TN
Sbjct: 615 GTLWVVGQGETADHVVQ--------YSTDGTVMARF-----DLKKIGYCRGIAVDMRTNH 661
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D ++ V +F +G ++ + G++ P+ V VD +G I V D G + + +
Sbjct: 662 ILVTDPDHGAVHVFRPDGSLVRTVRHP---RGEMTHPQYVTVDGEGNILVSDWGTHCVYV 718
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ G+FL FG GSG+G+ G G+ S+G+ILV D N R+Q+F
Sbjct: 719 YDEPGKFLFQFGGEGSGEGQMIGPYGICTDSSGHILVADYGNERVQIF 766
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+FG EGSE G+ + RGV V I V D GN R+Q+ +G +LR F G G+ K
Sbjct: 544 TFGGEGSEPGKFSYRRGVVVSPSNEIYVADGGNRRVQVHNTEGVYLRHFPTVVPGTGD-K 602
Query: 294 GLE--GVAVMSNGNILVC 309
+E GV + NG + V
Sbjct: 603 DMEPHGVCMDGNGTLWVV 620
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G GS G P GI I+VAD N RVQ+ H + V
Sbjct: 719 YDEPGKFLFQFGGEGSGEGQMIGPYGICTDSSGHILVADYGNERVQIFTRHGEF-VRTVR 777
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
F P G+ VGP+ +VV S V V+
Sbjct: 778 TGF-LPEGLTVGPEGQLVVTSSDKATVTVY 806
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 13/138 (9%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS--EGSEEGQL 245
FG G++ G+ + + VS +N + V+D N RVQ+ + G + F + G+ + +
Sbjct: 545 FGGEGSEPGKFSYRRGVVVSPSNEIYVADGGNRRVQVHNTEGVYLRHFPTVVPGTGDKDM 604
Query: 246 KFPRGVAVDDQGYISV---GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV-M 301
+ P GV +D G + V G++ ++ +Q ++ DG + F G G+AV M
Sbjct: 605 E-PHGVCMDGNGTLWVVGQGETADHVVQ-YSTDGTVMARFDLKKIG-----YCRGIAVDM 657
Query: 302 SNGNILVCDRENHRIQVF 319
+ILV D ++ + VF
Sbjct: 658 RTNHILVTDPDHGAVHVF 675
>gi|283779906|ref|YP_003370661.1| NHL repeat containing protein [Pirellula staleyi DSM 6068]
gi|283438359|gb|ADB16801.1| NHL repeat containing protein [Pirellula staleyi DSM 6068]
Length = 323
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 146/282 (51%), Gaps = 15/282 (5%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT--WPRGI 103
G RG+ PG FT PR + + +++ V D++ R+QV ++ N F P G+
Sbjct: 47 GRRGNSPGKFTKPRAVTIDAADNLYVVDTTP-RIQVFTGDGEMLRNWQTPEFANGKPSGL 105
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 163
++ + +++V+D+ RV + G + K ++G G E V DS
Sbjct: 106 SMDREGNLLVSDTHYFRVLTYTPTGELL-KDRTIGGVCGHGEGEFGFVTD-----CVQDS 159
Query: 164 N-NHRVQIFDVNGRV--FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
N+ V + R+ F D F+ ++GS G + Q + P + + + +++ V+D+ NH
Sbjct: 160 QGNYFVAEYGEFDRIQKFSPDRKFLLQWGSPGGELMQFKRPQKLVIDDQDQLWVTDACNH 219
Query: 221 RVQIFDVNG---RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
RVQ+FD+ G +++ +G G E GQL +P + +D QG++ + + GN+R+Q FT DG+
Sbjct: 220 RVQVFDIRGNQVKLVAHWGQHGYEPGQLNYPYDILLDGQGHVYLCEFGNHRVQKFTLDGK 279
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL ++G G G+ G+ S G + V D NHR+Q F
Sbjct: 280 FLASWGTNGREPGQLDQPWGIIQDSRGRMYVLDSYNHRVQRF 321
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 70/145 (48%), Gaps = 16/145 (11%)
Query: 39 RRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT 98
R+ + GS G E F P+ + + + + V D+ NHRVQV FD++ N V L
Sbjct: 181 RKFLLQWGSPGGELMQFKRPQKLVIDDQDQLWVTDACNHRVQV----FDIRGNQVKLVAH 236
Query: 99 W------------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH 146
W P I + + + + NHRVQ F DG F+ +G+ G + GQL+
Sbjct: 237 WGQHGYEPGQLNYPYDILLDGQGHVYLCEFGNHRVQKFTLDGKFLASWGTNGREPGQLDQ 296
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIF 171
P I + R+ V DS NHRVQ F
Sbjct: 297 PWGIIQDSRGRMYVLDSYNHRVQRF 321
>gi|341900778|gb|EGT56713.1| CBN-NCL-1 protein [Caenorhabditis brenneri]
Length = 971
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 121/219 (55%), Gaps = 22/219 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT- 155
FT P G+AV IVVAD++NHR+QVF +G F +FG G + GQL +P+ +AV+ T
Sbjct: 705 FTEPSGVAVNSQGDIVVADTNNHRIQVFDKEGRFKFQFGECGKRDGQLLYPNRVAVNRTT 764
Query: 156 -NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ V+ S H++Q+++ G+ F+ KFG A L+HP + V N R+IV
Sbjct: 765 GDFVVTERSPTHQIQVYNQYGQ-------FLRKFG-----ANILQHPRGVCVDNKGRIIV 812
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD+ G ++ F S L+FP GV +D+ I + D+ + I++F+
Sbjct: 813 VECKVMRVIIFDMFGNILQKF----SCSRYLEFPNGVCTNDKNEILISDNRAHCIKVFSY 868
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
+GQ+LR G G+G GV + S G ++V D N
Sbjct: 869 EGQYLRQIG----GEGVTNYPIGVGINSLGEVVVADNHN 903
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 142/297 (47%), Gaps = 45/297 (15%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL- 95
QK K G G G FT P G+AV IVVAD++NHR+QV FD + F
Sbjct: 687 QKMIYHCKFGEFGVMEGQFTEPSGVAVNSQGDIVVADTNNHRIQV----FDKEGRFKFQF 742
Query: 96 --------AFTWPRGIAVGPDNS--IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE 145
+P +AV +V S H++QV+ G F+ KFG A L+
Sbjct: 743 GECGKRDGQLLYPNRVAVNRTTGDFVVTERSPTHQIQVYNQYGQFLRKFG-----ANILQ 797
Query: 146 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
HP + V N R+IV + RV IFD+ G + Q KF + LE P+ +
Sbjct: 798 HPRGVCVDNKGRIIVVECKVMRVIIFDMFGNILQ-------KFSC----SRYLEFPNGVC 846
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG 265
++ N +++SD+ H +++F G+ + G EG +P GV ++ G + V D+
Sbjct: 847 TNDKNEILISDNRAHCIKVFSYEGQYLRQIGGEGVT----NYPIGVGINSLGEVVVADNH 902
Query: 266 NN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHRIQVF 319
NN + +F+ DG + G+ + K + VA++ +G++++ ++ +R+ ++
Sbjct: 903 NNFNLTVFSQDGTMI------GALESRVKHAQCFDVALVDDGSVVLASKD-YRLYLY 952
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 18/202 (8%)
Query: 120 RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ 179
R Q+ + + KFG G GQ P +AV++ ++V+D+NNHR+Q+FD GR
Sbjct: 681 RSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNSQGDIVVADTNNHRIQVFDKEGR--- 737
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNT--NRVIVSDSNNHRVQIFDVNGRVITSFGS 237
F +FG G + GQL +P+ +AV+ T + V+ S H++Q+++ G+ + FG+
Sbjct: 738 ----FKFQFGECGKRDGQLLYPNRVAVNRTTGDFVVTERSPTHQIQVYNQYGQFLRKFGA 793
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
L+ PRGV VD++G I V + R+ IF G L+ F C S EF G
Sbjct: 794 -----NILQHPRGVCVDNKGRIIVVECKVMRVIIFDMFGNILQKFSC--SRYLEFPN--G 844
Query: 298 VAVMSNGNILVCDRENHRIQVF 319
V IL+ D H I+VF
Sbjct: 845 VCTNDKNEILISDNRAHCIKVF 866
>gi|291241186|ref|XP_002740491.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 1135
Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats.
Identities = 85/256 (33%), Positives = 129/256 (50%), Gaps = 18/256 (7%)
Query: 28 GTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF---P 84
G+ + + K+ L K G +GS P G+ + + + +V D+ N+R+Q+
Sbjct: 448 GSPVKINVIPKKGLLRKFGGKGSAVEQLRNPYGVIMTRNRNALVCDTGNNRLQIFTLDGN 507
Query: 85 HFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQL 144
H +L F PR A+ D I +S +V V +G + FGS +L
Sbjct: 508 HLNLIEFTNFAEPFSPRYSAISDDGYIFT--TSYKKVVVCDVNGKLIRVFGSK-----EL 560
Query: 145 EHPHYIAVSNTN-RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
++P +A+S N V V D+ +H V R++ G ++ FGS G Q P
Sbjct: 561 QYPMGLAISPINGNVYVVDNGSHCV-------RIYSQLGVYMTSFGSSGTGDSQFNGPWD 613
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
IA+ NT +IVSD N+R+QIFD N R + FG G++EG+L P+GVA D G + V D
Sbjct: 614 IAIGNTGNIIVSDLRNNRIQIFDNNCRFLNVFGGRGTKEGELNSPQGVAADTDGCVYVCD 673
Query: 264 SGNNRIQIFTPDGQFL 279
NNR+Q F P G+F+
Sbjct: 674 YHNNRVQKFDPQGKFI 689
Score = 113 bits (283), Expect = 1e-22, Method: Composition-based stats.
Identities = 74/221 (33%), Positives = 118/221 (53%), Gaps = 17/221 (7%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ + + + +V D+ N+R+Q+F DG + N A P Y A+S+ +
Sbjct: 478 PYGVIMTRNRNALVCDTGNNRLQIFTLDGNHLNLI-EFTNFAEPFS-PRYSAISDDGYIF 535
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSN 218
+ +V + DVNG++ + FGS +L++P +A+S N V V D+
Sbjct: 536 TTSYK--KVVVCDVNGKLIRV-------FGSK-----ELQYPMGLAISPINGNVYVVDNG 581
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
+H V+I+ G +TSFGS G+ + Q P +A+ + G I V D NNRIQIF + +F
Sbjct: 582 SHCVRIYSQLGVYMTSFGSSGTGDSQFNGPWDIAIGNTGNIIVSDLRNNRIQIFDNNCRF 641
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L FG G+ +GE +GVA ++G + VCD N+R+Q F
Sbjct: 642 LNVFGGRGTKEGELNSPQGVAADTDGCVYVCDYHNNRVQKF 682
Score = 99.4 bits (246), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
Query: 108 DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSNNH 166
D + +D N +V V +G + FGS ++++P +A+S N V V D +
Sbjct: 933 DIQFIPSDYYNKQVVVCDENGKLIRVFGSK-----EIQYPMGVAISPINGHVYVVDHGSD 987
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
V R++ G ++ FGS G + Q P IA+ NT +IVSD N+ +Q+FD
Sbjct: 988 CV-------RIYSQLGVYMTSFGSSGTRDSQFNFPWDIAIGNTGNIIVSDYRNNCIQVFD 1040
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
N R++ FG G +EG+ P GVA D G + + D G NR+Q F G+F+
Sbjct: 1041 NNCRLLNVFGGRGDKEGEFYGPEGVATDTDGCVYICDYGYNRVQKFDSQGKFI 1093
Score = 98.2 bits (243), Expect = 4e-18, Method: Composition-based stats.
Identities = 68/199 (34%), Positives = 96/199 (48%), Gaps = 13/199 (6%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDN-SIVVADS 116
PR A+ D I +S +V VC + L +P G+A+ P N ++ V D+
Sbjct: 523 PRYSAISDDGYIFT--TSYKKVVVCDVNGKLIRVFGSKELQYPMGLAISPINGNVYVVDN 580
Query: 117 SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
+H V+++ G ++ FGS G Q P IA+ NT +IVSD N+R+QIFD N R
Sbjct: 581 GSHCVRIYSQLGVYMTSFGSSGTGDSQFNGPWDIAIGNTGNIIVSDLRNNRIQIFDNNCR 640
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
F+ FG G K G+L P +A V V D +N+RVQ FD G+ I
Sbjct: 641 -------FLNVFGGRGTKEGELNSPQGVAADTDGCVYVCDYHNNRVQKFDPQGKFIARI- 692
Query: 237 SEGSEEGQLKFPRGVAVDD 255
S E + RG+ V D
Sbjct: 693 --DSIEDDVSSHRGIYVTD 709
Score = 92.8 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 13/164 (7%)
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVS 215
+ I SD N +V + D NG++ + FGS ++++P +A+S N V V
Sbjct: 935 QFIPSDYYNKQVVVCDENGKLIRV-------FGSK-----EIQYPMGVAISPINGHVYVV 982
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D + V+I+ G +TSFGS G+ + Q FP +A+ + G I V D NN IQ+F +
Sbjct: 983 DHGSDCVRIYSQLGVYMTSFGSSGTRDSQFNFPWDIAIGNTGNIIVSDYRNNCIQVFDNN 1042
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ L FG G +GEF G EGVA ++G + +CD +R+Q F
Sbjct: 1043 CRLLNVFGGRGDKEGEFYGPEGVATDTDGCVYICDYGYNRVQKF 1086
Score = 85.1 bits (209), Expect = 4e-14, Method: Composition-based stats.
Identities = 58/191 (30%), Positives = 87/191 (45%), Gaps = 11/191 (5%)
Query: 66 DNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNS-IVVADSSNHRVQVF 124
D + +D N +V VC + L +P G+A+ P N + V D + V+++
Sbjct: 933 DIQFIPSDYYNKQVVVCDENGKLIRVFGSKEIQYPMGVAISPINGHVYVVDHGSDCVRIY 992
Query: 125 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTF 184
G ++ FGS G + Q P IA+ NT +IVSD N+ +Q+FD N R+
Sbjct: 993 SQLGVYMTSFGSSGTRDSQFNFPWDIAIGNTGNIIVSDYRNNCIQVFDNNCRLLNV---- 1048
Query: 185 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQ 244
FG G+K G+ P +A V + D +RVQ FD G+ I S E
Sbjct: 1049 ---FGGRGDKEGEFYGPEGVATDTDGCVYICDYGYNRVQKFDSQGKFIARI---DSIEDN 1102
Query: 245 LKFPRGVAVDD 255
+ P G+ V D
Sbjct: 1103 VSGPCGIYVSD 1113
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 21/179 (11%)
Query: 57 WPRGIAVGPDNS-IVVADSSNHRVQVCFPHFDLKTNCVFLA------FTWPRGIAVGPDN 109
+P G+A+ P N + V D + V++ + + + F +P IA+G
Sbjct: 966 YPMGVAISPINGHVYVVDHGSDCVRI-YSQLGVYMTSFGSSGTRDSQFNFPWDIAIGNTG 1024
Query: 110 SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 169
+I+V+D N+ +QVF ++ + FG G+K G+ P +A V + D +RVQ
Sbjct: 1025 NIIVSDYRNNCIQVFDNNCRLLNVFGGRGDKEGEFYGPEGVATDTDGCVYICDYGYNRVQ 1084
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT---NRVIVSDSNNHRVQIF 225
FD S G F+ + S+ + + P I VS+ ++V+V++ + V++F
Sbjct: 1085 KFD-------SQGKFIARIDSIED---NVSGPCGIYVSDDKPFSKVVVTEWDRGCVKVF 1133
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 23/140 (16%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------- 95
GS G+ F +P IA+G +I+V+D N+ +QV FD NC L
Sbjct: 1003 GSSGTRDSQFNFPWDIAIGNTGNIIVSDYRNNCIQV----FD--NNCRLLNVFGGRGDKE 1056
Query: 96 -AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F P G+A D + + D +RVQ F S G F+ + S+ + + P I VS+
Sbjct: 1057 GEFYGPEGVATDTDGCVYICDYGYNRVQKFDSQGKFIARIDSIED---NVSGPCGIYVSD 1113
Query: 155 T---NRVIVSDSNNHRVQIF 171
++V+V++ + V++F
Sbjct: 1114 DKPFSKVVVTEWDRGCVKVF 1133
Score = 38.9 bits (89), Expect = 3.4, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
P LR FG GS + + GV + N N LVCD N+R+Q+F
Sbjct: 457 PKKGLLRKFGGKGSAVEQLRNPYGVIMTRNRNALVCDTGNNRLQIF 502
>gi|443720820|gb|ELU10405.1| hypothetical protein CAPTEDRAFT_53115, partial [Capitella teleta]
Length = 188
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 110/199 (55%), Gaps = 14/199 (7%)
Query: 121 VQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQS 180
+ V+ SDG +F + L+ +AV+++ VIV+DS + I D +GR
Sbjct: 1 ILVYTSDGQLCSRF----SYPELLQQALSVAVASSGHVIVADSELDMIYIMDKHGR---- 52
Query: 181 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGS 240
++ KFG G+ G P ++ V + +IVSD +NHR+Q+FD +G+ + +FG GS
Sbjct: 53 ---YLKKFGGTGSSPGHFNRPTFVCVGENDCIIVSDGDNHRIQVFDKSGKFLYAFGEAGS 109
Query: 241 EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
+GQL P GV VD G I V D GN RIQIF G+F+ C S + G+AV
Sbjct: 110 GKGQLCMPFGVVVDYHGNILVVDGGNQRIQIFKYGGEFVS---CIESLADPMRAPRGIAV 166
Query: 301 MSNGNILVCDRENHRIQVF 319
++G++ V DR+NH ++ F
Sbjct: 167 TTDGHVWVADRDNHCVKKF 185
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD-LK----TNCVFLAFT 98
++ SR S P +AV ++VADS + + H LK T F
Sbjct: 9 QLCSRFSYPELLQQALSVAVASSGHVIVADSELDMIYIMDKHGRYLKKFGGTGSSPGHFN 68
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P + VG ++ I+V+D NHR+QVF G F+ FG G+ GQL P + V +
Sbjct: 69 RPTFVCVGENDCIIVSDGDNHRIQVFDKSGKFLYAFGEAGSGKGQLCMPFGVVVDYHGNI 128
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+V D N R+QIF G FV S+ A + P IAV+ V V+D +
Sbjct: 129 LVVDGGNQRIQIFKYGGE-------FVSCIESL---ADPMRAPRGIAVTTDGHVWVADRD 178
Query: 219 NHRVQIF 225
NH V+ F
Sbjct: 179 NHCVKKF 185
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 28 GTTPRSQYLQKR-RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHF 86
G R Q K + + G GS G P G+ V +I+V D N R+Q+ F +
Sbjct: 86 GDNHRIQVFDKSGKFLYAFGEAGSGKGQLCMPFGVVVDYHGNILVVDGGNQRIQI-FKYG 144
Query: 87 DLKTNCV-FLA--FTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+C+ LA PRGIAV D + VAD NH V+ F+
Sbjct: 145 GEFVSCIESLADPMRAPRGIAVTTDGHVWVADRDNHCVKKFK 186
>gi|268575368|ref|XP_002642663.1| C. briggsae CBR-NCL-1 protein [Caenorhabditis briggsae]
Length = 854
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 122/220 (55%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT- 155
FT P G+AV IVVAD++NHR+QVF DG F +FG G + GQL +P+ +AV+ T
Sbjct: 589 FTEPSGVAVNGQGDIVVADTNNHRIQVFDKDGRFKFQFGECGKRDGQLLYPNRVAVNRTT 648
Query: 156 -NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ V+ S H++Q+++ G+ F+ KFG A L+HP + V N R+IV
Sbjct: 649 GDFVVTERSPTHQIQVYNQYGQ-------FLRKFG-----ANILQHPRGVCVDNKGRIIV 696
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD+ G ++ F S L+FP GV +D+ I + D+ + I++F+
Sbjct: 697 VECKVMRVIIFDMFGNILQKF----SCSRYLEFPNGVCTNDKNEILISDNRAHCIKVFSY 752
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G+G GV + S G ++V D N+
Sbjct: 753 EGQYLRQIG----GEGVTNYPIGVGINSLGEVVVADNHNN 788
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 138/295 (46%), Gaps = 41/295 (13%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL- 95
QK K G G G FT P G+AV IVVAD++NHR+QV FD F
Sbjct: 571 QKMIYHCKFGEFGVMEGQFTEPSGVAVNGQGDIVVADTNNHRIQV----FDKDGRFKFQF 626
Query: 96 --------AFTWPRGIAVGPDNS--IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE 145
+P +AV +V S H++QV+ G F+ KFG A L+
Sbjct: 627 GECGKRDGQLLYPNRVAVNRTTGDFVVTERSPTHQIQVYNQYGQFLRKFG-----ANILQ 681
Query: 146 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
HP + V N R+IV + RV IFD+ G + Q KF + LE P+ +
Sbjct: 682 HPRGVCVDNKGRIIVVECKVMRVIIFDMFGNILQ-------KFSC----SRYLEFPNGVC 730
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG 265
++ N +++SD+ H +++F G+ + G EG +P GV ++ G + V D+
Sbjct: 731 TNDKNEILISDNRAHCIKVFSYEGQYLRQIGGEGVT----NYPIGVGINSLGEVVVADNH 786
Query: 266 NN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NN + +F+ DG + A F VA++ +G++++ ++ +R+ ++
Sbjct: 787 NNFNLTVFSQDGTMIGALESRVKHAQCFD----VALVDDGSVVLASKD-YRLYLY 836
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 18/202 (8%)
Query: 120 RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ 179
R Q+ + + KFG G GQ P +AV+ ++V+D+NNHR+Q+FD +GR
Sbjct: 565 RSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNGQGDIVVADTNNHRIQVFDKDGR--- 621
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNT--NRVIVSDSNNHRVQIFDVNGRVITSFGS 237
F +FG G + GQL +P+ +AV+ T + V+ S H++Q+++ G+ + FG+
Sbjct: 622 ----FKFQFGECGKRDGQLLYPNRVAVNRTTGDFVVTERSPTHQIQVYNQYGQFLRKFGA 677
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
L+ PRGV VD++G I V + R+ IF G L+ F C S EF G
Sbjct: 678 -----NILQHPRGVCVDNKGRIIVVECKVMRVIIFDMFGNILQKFSC--SRYLEFP--NG 728
Query: 298 VAVMSNGNILVCDRENHRIQVF 319
V IL+ D H I+VF
Sbjct: 729 VCTNDKNEILISDNRAHCIKVF 750
>gi|148265855|ref|YP_001232561.1| NHL repeat-containing protein [Geobacter uraniireducens Rf4]
gi|146399355|gb|ABQ27988.1| NHL repeat containing protein [Geobacter uraniireducens Rf4]
Length = 360
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 142/313 (45%), Gaps = 39/313 (12%)
Query: 31 PRSQYLQKRRLQFKIGSRGSE-----------PGCFTWPRGIAVGPDNSIVVADSSNHRV 79
P+ ++L R Q + GS+ P F P GIA + + V D NH +
Sbjct: 42 PKIEWLGAYRSQHDLPKTGSQLFFEGVFGKDDPIAFNRPSGIAADGEGLVYVCDPLNHAI 101
Query: 80 QVCFPHFDLKTNCVFL-------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVG 132
V +DLK N V + F P GI + +I VAD+ ++ +F D VG
Sbjct: 102 VV----YDLKNNKVHIFGKNLEQLFQEPMGIDIDVAGNIYVADADAKKIFIFNKDEKPVG 157
Query: 133 KFGSMGNKAGQLEHPHYIAVSNT-NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM 191
+ A + P IA+ R+IV DS H++++ D+ G+ S FG
Sbjct: 158 NI----DLAAFVTRPIGIAIDKERKRIIVCDSQGHKIEVIDLAGKQLFS-------FGKR 206
Query: 192 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGV 251
G + G+ P + + ++V+DS N RVQ+FD G+ I FG+ G G+ + +G+
Sbjct: 207 GGEEGEFNVPAWATILKDGTIVVADSLNTRVQLFDPTGKFIRKFGTRGDNPGEFQMIKGI 266
Query: 252 AVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD-----GEFKGLEGVAVMSNGNI 306
A D + +I D N IF+P G++L G + + G F G+ + N I
Sbjct: 267 ARDTEDHIYAVDGKGNTFSIFSPKGEYLLTVGGAFTSEQKIAPGGFLLPMGIFIDKNNTI 326
Query: 307 LVCDRENHRIQVF 319
V D+ N+R Q+F
Sbjct: 327 YVVDQMNYRFQMF 339
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLKTNCVFLA----- 96
K G+RG PG F +GIA ++ I D + + P + L F +
Sbjct: 249 KFGTRGDNPGEFQMIKGIARDTEDHIYAVDGKGNTFSIFSPKGEYLLTVGGAFTSEQKIA 308
Query: 97 ---FTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
F P GI + +N+I V D N+R Q+FQ
Sbjct: 309 PGGFLLPMGIFIDKNNTIYVVDQMNYRFQMFQ 340
>gi|260785718|ref|XP_002587907.1| hypothetical protein BRAFLDRAFT_87295 [Branchiostoma floridae]
gi|229273062|gb|EEN43918.1| hypothetical protein BRAFLDRAFT_87295 [Branchiostoma floridae]
Length = 841
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 144/287 (50%), Gaps = 40/287 (13%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTW 99
G +GSEPG F +PRG+ V P N I VAD N RVQV HF
Sbjct: 580 GGKGSEPGKFDYPRGVVVSPGNEIFVADK-NRRVQVHSTEGVYLRHFPTVVPGTGDKDMK 638
Query: 100 PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY---IAVS 153
P + + + ++ V ++++H VQ + +DGT + F L+ +Y IAV
Sbjct: 639 PHDVCMDGNGTLWVVGRGETAHHVVQ-YSTDGTAMAGF--------DLQKGYYDRGIAVD 689
Query: 154 -NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
TN ++V+D + V VF+ DG+ V ++ + G++ P Y+ V +
Sbjct: 690 MRTNHILVTDCDQGTVH-------VFRPDGSLVR---TVRHPRGEMIRPGYVTVDGEGNI 739
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+VSD ++ V + D +G+ + FG EGS EGQLK+P G+ D G+I V DS N R+QIF
Sbjct: 740 LVSDWRSYSVYVHDESGKFLFQFGGEGSGEGQLKWPAGICTDSSGHILVADSWNERVQIF 799
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
T G+F+R S EG+AV G ++V + +H + ++
Sbjct: 800 TRHGEFVRTVRTRSSP-------EGLAVGPEGQLVVTNHLDHTVAIY 839
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRG 102
F+ G GS G WP GI I+VADS N RVQ+ H + + P G
Sbjct: 760 FQFGGEGSGEGQLKWPAGICTDSSGHILVADSWNERVQIFTRHGEFVRTV--RTRSSPEG 817
Query: 103 IAVGPDNSIVVADSSNHRVQVF 124
+AVGP+ +VV + +H V ++
Sbjct: 818 LAVGPEGQLVVTNHLDHTVAIY 839
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW--GSGD 289
+ +FG +GSE G+ +PRGV V I V D N R+Q+ + +G +LR F G+GD
Sbjct: 576 VITFGGKGSEPGKFDYPRGVVVSPGNEIFVADK-NRRVQVHSTEGVYLRHFPTVVPGTGD 634
Query: 290 GEFKGLEGVAVMSNGNILVCDR 311
+ K + V + NG + V R
Sbjct: 635 KDMKPHD-VCMDGNGTLWVVGR 655
>gi|383863552|ref|XP_003707244.1| PREDICTED: brain tumor protein-like [Megachile rotundata]
Length = 796
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 122/220 (55%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ +AV T+
Sbjct: 539 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVKTS 598
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V R++V
Sbjct: 599 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ANILQHPRGVTVDTKGRIVV 646
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD G V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 647 VECKVMRVIIFDQAGNVLQKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 702
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+G +LR G G+G GV + + G IL+ D N+
Sbjct: 703 EGAYLRQIG----GEGITNYPIGVGINAVGEILIADNHNN 738
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 514 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 569
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 570 GRFKFQFGECGKRDGQLLYPNRVAVVKTSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 626
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V R++V + RV IFD G V Q KFG + L
Sbjct: 627 --ANILQHPRGVTVDTKGRIVVVECKVMRVIIFDQAGNVLQ-------KFGC----SKHL 673
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G + G EG +P GV ++ G
Sbjct: 674 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGAYLRQIGGEGIT----NYPIGVGINAVGE 729
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 730 ILIADNHNNFNLTIFTQDGQLVSAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 782
Query: 316 IQVF 319
+ ++
Sbjct: 783 LYIY 786
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
IF ++ + + KFG G GQ P +AV+ N +IV+D+NNHR+QIFD G
Sbjct: 511 IFPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG 570
Query: 230 RVITSFGSEGSEEGQLKFPRGVA-VDDQGYISVGD-SGNNRIQIFTPDGQFLRAFGCWGS 287
R FG G +GQL +P VA V G I V + S ++IQI+ GQF+R FG
Sbjct: 571 RFKFQFGECGKRDGQLLYPNRVAVVKTSGDIIVTERSPTHQIQIYNQYGQFVRKFGA--- 627
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ GV V + G I+V + + R+ +F
Sbjct: 628 --NILQHPRGVTVDTKGRIVVVECKVMRVIIF 657
>gi|260785796|ref|XP_002587946.1| hypothetical protein BRAFLDRAFT_87334 [Branchiostoma floridae]
gi|229273101|gb|EEN43957.1| hypothetical protein BRAFLDRAFT_87334 [Branchiostoma floridae]
Length = 786
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 135/270 (50%), Gaps = 30/270 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTW 99
G GS PG F +PRG+ V P N I VAD N RVQV HF
Sbjct: 526 GGEGSGPGKFYFPRGVVVSPSNEIFVADGGNRRVQVHSTEGVYLRHFPTVVPGTGDKDME 585
Query: 100 PRGIAVGPDNSIVVADS---SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS--- 153
P + + + ++ V S ++H VQ + +DGT + F + N HY ++
Sbjct: 586 PHDVCMDGNGTLWVVGSEVTADHVVQ-YSTDGTAMAGF-DLKNSY------HYRGITVDM 637
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
TN ++VSD++ V VF+ DG V ++ + G+++ P I V ++
Sbjct: 638 RTNHILVSDADQGAVH-------VFRPDGCLVR---TVRHPQGEMKRPRCITVDGEGNIL 687
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
VSD +NH V ++D +G+ + FG GS EGQLK+PRG+ D G+I V D GN R+QIFT
Sbjct: 688 VSDWDNHCVYVYDESGKFLFQFGGWGSGEGQLKWPRGICTDSSGHIIVADFGNKRVQIFT 747
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
G+++R +G G EG V++N
Sbjct: 748 RHGEYVRTVRIEFQPEGLAVGPEGQLVVTN 777
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 119/230 (51%), Gaps = 25/230 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE-HPHYIAVSNT 155
F +PRG+ V P N I VAD N RVQV ++G ++ F ++ G + PH + +
Sbjct: 535 FYFPRGVVVSPSNEIFVADGGNRRVQVHSTEGVYLRHFPTVVPGTGDKDMEPHDVCMDGN 594
Query: 156 NRVIVSDSN---NHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS---NT 209
+ V S +H VQ + +DGT + F + N HY ++ T
Sbjct: 595 GTLWVVGSEVTADHVVQ--------YSTDGTAMAGF-DLKNSY------HYRGITVDMRT 639
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
N ++VSD++ V +F +G ++ + +G++K PR + VD +G I V D N+ +
Sbjct: 640 NHILVSDADQGAVHVFRPDGCLVRTVRHP---QGEMKRPRCITVDGEGNILVSDWDNHCV 696
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++ G+FL FG WGSG+G+ K G+ S+G+I+V D N R+Q+F
Sbjct: 697 YVYDESGKFLFQFGGWGSGEGQLKWPRGICTDSSGHIIVADFGNKRVQIF 746
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ +FG EGS G+ FPRGV V I V D GN R+Q+ + +G +LR F G G+
Sbjct: 522 VITFGGEGSGPGKFYFPRGVVVSPSNEIFVADGGNRRVQVHSTEGVYLRHFPTVVPGTGD 581
Query: 292 FKGLEGVAVMSNGN 305
K +E V +GN
Sbjct: 582 -KDMEPHDVCMDGN 594
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G GS G WPRGI I+VAD N RVQ+ H + V
Sbjct: 699 YDESGKFLFQFGGWGSGEGQLKWPRGICTDSSGHIIVADFGNKRVQIFTRHGEY-VRTVR 757
Query: 95 LAFTWPRGIAVGPDNSIVVAD 115
+ F P G+AVGP+ +VV +
Sbjct: 758 IEFQ-PEGLAVGPEGQLVVTN 777
>gi|345860134|ref|ZP_08812460.1| NHL repeat family protein [Desulfosporosinus sp. OT]
gi|344326775|gb|EGW38227.1| NHL repeat family protein [Desulfosporosinus sp. OT]
Length = 343
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 133/268 (49%), Gaps = 15/268 (5%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSS 117
P +AV D + VAD+ + +VQV + + +P + +N + VADS+
Sbjct: 83 PLAVAVSADR-VFVADTGHSQVQVYSRNGKWVATWGYGKLNYPFALTFS-NNMLYVADSN 140
Query: 118 NHRVQVFQSDGT----FVGK--FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
+ VF + G + K K G++ P + V N + V+D N V +
Sbjct: 141 LMELFVFDAKGNEQKPLLNKQRLQLTTGKQGEIIRPTAVQVGANNLMYVADVGNQVVLVM 200
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
D +G++ + FG G AG+ ++P+ + V + V VSDSNN R+QIFD G
Sbjct: 201 DTSGKILRY-------FGGAGTTAGKFQYPNALYVGKNDTVYVSDSNNGRIQIFDQQGHF 253
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
++ + G L PRG+AV D G++ V D + ++ + G L FG GSG+G+
Sbjct: 254 LSKITGSQGKNGPLALPRGLAVTDSGFVLVVDVFMHSVRAYDETGSELWTFGGMGSGNGQ 313
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G+ V ++G I + DREN+R+QVF
Sbjct: 314 FNFPNGLCVDTDGRIYITDRENNRVQVF 341
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 17/138 (12%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------- 96
G G+ G F +P + VG ++++ V+DS+N R+Q+ FD + + FL+
Sbjct: 210 FGGAGTTAGKFQYPNALYVGKNDTVYVSDSNNGRIQI----FDQQGH--FLSKITGSQGK 263
Query: 97 ---FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
PRG+AV ++V D H V+ + G+ + FG MG+ GQ P+ + V
Sbjct: 264 NGPLALPRGLAVTDSGFVLVVDVFMHSVRAYDETGSELWTFGGMGSGNGQFNFPNGLCVD 323
Query: 154 NTNRVIVSDSNNHRVQIF 171
R+ ++D N+RVQ+F
Sbjct: 324 TDGRIYITDRENNRVQVF 341
>gi|225850988|ref|YP_002731222.1| NHL repeat protein [Persephonella marina EX-H1]
gi|225645800|gb|ACO03986.1| NHL repeat protein [Persephonella marina EX-H1]
Length = 377
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 108/222 (48%), Gaps = 9/222 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRV 158
P GI V + VAD+ RV V+ G + G G L+ P IA+ R+
Sbjct: 125 PVGIDVDKTGKVYVADAKQQRVFVYDIKGKLITTIGE-PEGPGLLQRPAGIALNEKLGRI 183
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDS 217
V D +HRV+++ + DG F+ FG G + GQ P IA+ N + V D+
Sbjct: 184 YVVDVLDHRVKVYSLK------DGRFLFSFGKRGKEEGQFNFPTNIAIDRRNGNIAVVDT 237
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
N RVQIF G I SFG G G P+GV +D +G+I V D+ N IQIF G+
Sbjct: 238 MNFRVQIFTPEGEFIRSFGKLGVVPGTFARPKGVGIDSEGHIYVADAAFNNIQIFDDKGR 297
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L G +G G GEF G+ V + + V D N RIQVF
Sbjct: 298 LLLFIGKFGFGPGEFNLPAGLYVDRSDKLYVADSMNKRIQVF 339
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 114/212 (53%), Gaps = 23/212 (10%)
Query: 111 IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
+ V D N +V +F+G G+L P I V T +V V+D+ RV +
Sbjct: 101 VFVIDPKNKKV-------SFIG-----DKPMGKLRIPVGIDVDKTGKVYVADAKQQRVFV 148
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDSNNHRVQIFDV-N 228
+D+ G++ + G G G L+ P IA+ R+ V D +HRV+++ + +
Sbjct: 149 YDIKGKLITTIGEPEG--------PGLLQRPAGIALNEKLGRIYVVDVLDHRVKVYSLKD 200
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQ-GYISVGDSGNNRIQIFTPDGQFLRAFGCWGS 287
GR + SFG G EEGQ FP +A+D + G I+V D+ N R+QIFTP+G+F+R+FG G
Sbjct: 201 GRFLFSFGKRGKEEGQFNFPTNIAIDRRNGNIAVVDTMNFRVQIFTPEGEFIRSFGKLGV 260
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G F +GV + S G+I V D + IQ+F
Sbjct: 261 VPGTFARPKGVGIDSEGHIYVADAAFNNIQIF 292
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
Query: 36 LQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDN-SIVVADSSNHRVQVCFPHFDL-----K 89
L+ R F G RG E G F +P IA+ N +I V D+ N RVQ+ P + K
Sbjct: 198 LKDGRFLFSFGKRGKEEGQFNFPTNIAIDRRNGNIAVVDTMNFRVQIFTPEGEFIRSFGK 257
Query: 90 TNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
V F P+G+ + + I VAD++ + +Q+F G + G G G+ P
Sbjct: 258 LGVVPGTFARPKGVGIDSEGHIYVADAAFNNIQIFDDKGRLLLFIGKFGFGPGEFNLPAG 317
Query: 150 IAVSNTNRVIVSDSNNHRVQIF 171
+ V ++++ V+DS N R+Q+F
Sbjct: 318 LYVDRSDKLYVADSMNKRIQVF 339
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 19/105 (18%)
Query: 30 TPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
TP ++++ G G PG F P+G+ + + I VAD++ + +Q+ FD K
Sbjct: 246 TPEGEFIRS------FGKLGVVPGTFARPKGVGIDSEGHIYVADAAFNNIQI----FDDK 295
Query: 90 TNCVFL---------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ F P G+ V + + VADS N R+QVFQ
Sbjct: 296 GRLLLFIGKFGFGPGEFNLPAGLYVDRSDKLYVADSMNKRIQVFQ 340
>gi|380026918|ref|XP_003697186.1| PREDICTED: brain tumor protein-like [Apis florea]
Length = 798
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 123/220 (55%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ +AV T+
Sbjct: 541 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVKTS 600
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V + R++V
Sbjct: 601 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ANILQHPRGVTVDSKGRIVV 648
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD G V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 649 VECKVMRVIIFDQAGIVLQKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 704
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+G +LR G G+G GV + + G IL+ D N+
Sbjct: 705 EGAYLRQIG----GEGITNYPIGVGINAVGEILIADNHNN 740
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 516 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 571
Query: 90 TNCVFL---------AFTWPRGIAVGPDNS--IVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 572 GRFKFQFGECGKRDGQLLYPNRVAVVKTSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 628
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V + R++V + RV IFD G V Q KFG + L
Sbjct: 629 --ANILQHPRGVTVDSKGRIVVVECKVMRVIIFDQAGIVLQ-------KFGC----SKHL 675
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G + G EG +P GV ++ G
Sbjct: 676 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGAYLRQIGGEGIT----NYPIGVGINAVGE 731
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 732 ILIADNHNNFNLTIFTQDGQLVSAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 784
Query: 316 IQVF 319
+ ++
Sbjct: 785 LYIY 788
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
IF ++ + + KFG G GQ P +AV+ N +IV+D+NNHR+QIFD G
Sbjct: 513 IFPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG 572
Query: 230 RVITSFGSEGSEEGQLKFPRGVA-VDDQGYISVGD-SGNNRIQIFTPDGQFLRAFGCWGS 287
R FG G +GQL +P VA V G I V + S ++IQI+ GQF+R FG
Sbjct: 573 RFKFQFGECGKRDGQLLYPNRVAVVKTSGDIIVTERSPTHQIQIYNQYGQFVRKFGA--- 629
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ GV V S G I+V + + R+ +F
Sbjct: 630 --NILQHPRGVTVDSKGRIVVVECKVMRVIIF 659
>gi|296131666|ref|YP_003638913.1| NHL repeat containing protein [Thermincola potens JR]
gi|296030244|gb|ADG81012.1| NHL repeat containing protein [Thermincola potens JR]
Length = 355
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 126/279 (45%), Gaps = 57/279 (20%)
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG-------SMGNKA----GQL 144
AF P +A DN+I V DS N+RV VF G F+ +FG + G KA G+
Sbjct: 63 AFNKPMSVATDKDNNIYVTDSGNNRVVVFNRRGEFMYEFGERGVALPAPGYKATWSPGKF 122
Query: 145 EHPHYIAV-SNTNRVIVSDSNNHRVQIFDVNGR--------------------------- 176
+P+ I + T + V+D N R+Q+FD G+
Sbjct: 123 NYPYGIDIDEETGNIFVADLANQRIQVFDRKGKFIDWFPKGPYGGTATDIFPLALDVKDG 182
Query: 177 -----------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
+F + G FV FG G + GQ + P+ IAV + + VSDSNN RVQ
Sbjct: 183 KVYIANPFQVVIFTTKGKFVKDFGMPGKEEGQFDRPNGIAVGDDGTIYVSDSNNLRVQAL 242
Query: 226 DVNGRVITSFGSE-------GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
D NG+V +G + Q + PR +AV G I V D+ + I++ +P G+
Sbjct: 243 DQNGKVKWVYGKPVDAWDNFNKKPQQFELPRNIAVGPDGNIYVIDAFDFNIKVLSPQGKL 302
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
L G G DG F G+A+ + I V D+EN R+Q
Sbjct: 303 LAEMGQRGVDDGTFNFPNGIAITKDKVIYVADKENDRVQ 341
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 111/231 (48%), Gaps = 20/231 (8%)
Query: 52 PGCFTWPRGIAVGPDN-SIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW-PRGIAVGPDN 109
PG F +P GI + + +I VAD +N R+QV FD K + W P+G G
Sbjct: 119 PGKFNYPYGIDIDEETGNIFVADLANQRIQV----FDRKGKFI----DWFPKGPYGGTAT 170
Query: 110 SIV----------VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
I V ++ +V +F + G FV FG G + GQ + P+ IAV + +
Sbjct: 171 DIFPLALDVKDGKVYIANPFQVVIFTTKGKFVKDFGMPGKEEGQFDRPNGIAVGDDGTIY 230
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
VSDSNN RVQ D NG+V G V + + K Q E P IAV + V D+ +
Sbjct: 231 VSDSNNLRVQALDQNGKVKWVYGKPVDAWDNFNKKPQQFELPRNIAVGPDGNIYVIDAFD 290
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
+++ G+++ G G ++G FP G+A+ I V D N+R+Q
Sbjct: 291 FNIKVLSPQGKLLAEMGQRGVDDGTFNFPNGIAITKDKVIYVADKENDRVQ 341
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 69/151 (45%), Gaps = 20/151 (13%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------------- 81
+ K + G G E G F P GIAVG D +I V+DS+N RVQ
Sbjct: 195 FTTKGKFVKDFGMPGKEEGQFDRPNGIAVGDDGTIYVSDSNNLRVQALDQNGKVKWVYGK 254
Query: 82 ---CFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
+ +F+ K F PR IAVGPD +I V D+ + ++V G + + G G
Sbjct: 255 PVDAWDNFNKKPQ----QFELPRNIAVGPDGNIYVIDAFDFNIKVLSPQGKLLAEMGQRG 310
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 169
G P+ IA++ + V+D N RVQ
Sbjct: 311 VDDGTFNFPNGIAITKDKVIYVADKENDRVQ 341
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG-----------DGEFKGLE 296
P VA D I V DSGNNR+ +F G+F+ FG G G+F
Sbjct: 67 PMSVATDKDNNIYVTDSGNNRVVVFNRRGEFMYEFGERGVALPAPGYKATWSPGKFNYPY 126
Query: 297 GVAV-MSNGNILVCDRENHRIQVF 319
G+ + GNI V D N RIQVF
Sbjct: 127 GIDIDEETGNIFVADLANQRIQVF 150
>gi|328793151|ref|XP_003251836.1| PREDICTED: b-box type zinc finger protein ncl-1 [Apis mellifera]
Length = 798
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 123/220 (55%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G + GQL +P+ +AV T+
Sbjct: 541 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVKTS 600
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V + R++V
Sbjct: 601 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ANILQHPRGVTVDSKGRIVV 648
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD G V+ FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 649 VECKVMRVIIFDQAGIVLQKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 704
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+G +LR G G+G GV + + G IL+ D N+
Sbjct: 705 EGAYLRQIG----GEGITNYPIGVGINAVGEILIADNHNN 740
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 516 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 571
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 572 GRFKFQFGECGKRDGQLLYPNRVAVVKTSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 628
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V + R++V + RV IFD G V Q KFG + L
Sbjct: 629 --ANILQHPRGVTVDSKGRIVVVECKVMRVIIFDQAGIVLQ-------KFGC----SKHL 675
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G + G EG +P GV ++ G
Sbjct: 676 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGAYLRQIGGEGIT----NYPIGVGINAVGE 731
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 732 ILIADNHNNFNLTIFTQDGQLVSAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 784
Query: 316 IQVF 319
+ ++
Sbjct: 785 LYIY 788
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
IF ++ + + KFG G GQ P +AV+ N +IV+D+NNHR+QIFD G
Sbjct: 513 IFPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG 572
Query: 230 RVITSFGSEGSEEGQLKFPRGVA-VDDQGYISVGD-SGNNRIQIFTPDGQFLRAFGCWGS 287
R FG G +GQL +P VA V G I V + S ++IQI+ GQF+R FG
Sbjct: 573 RFKFQFGECGKRDGQLLYPNRVAVVKTSGDIIVTERSPTHQIQIYNQYGQFVRKFGA--- 629
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ GV V S G I+V + + R+ +F
Sbjct: 630 --NILQHPRGVTVDSKGRIVVVECKVMRVIIF 659
>gi|322791064|gb|EFZ15664.1| hypothetical protein SINV_11910 [Solenopsis invicta]
Length = 943
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 124/249 (49%), Gaps = 29/249 (11%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ + +I+++D SN+R+Q+++ DGT + KFG GN Q P IAV R+I
Sbjct: 634 PWGLTCDHEGNIIISDRSNNRIQIYREDGTLIRKFGCYGNGPCQFNRPAGIAVDARRRLI 693
Query: 160 VSDSNNHRVQI-------FDVNGR--VFQ---SDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
V D +NHRVQ ++ N VFQ ++G F+ FG G K GQ +P +AV+
Sbjct: 694 VVDKDNHRVQCISKLSFGYNHNDEIIVFQILTTEGEFLRSFGEHGEKQGQFCYPWDVAVN 753
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+ + V+D+ NHRVQ+F G + FG + + L PRG+ + +G + V D N+
Sbjct: 754 SVCEIAVTDTRNHRVQLFSPEGIPLRMFGGQAHQLRYLDSPRGICFNPEGKLVVTDFNNH 813
Query: 268 RIQIFTPDGQFLRAFGCWGSG-----DGE------------FKGLEGVAVMSNGNILVCD 310
+ I + R C DGE F+ +GV +G+ILV D
Sbjct: 814 HVLIIEYNMTESRILKCEKESKCRRQDGENNDGQNDENTPTFQRPQGVIAADDGSILVAD 873
Query: 311 RENHRIQVF 319
++ I+ F
Sbjct: 874 SRHNSIKAF 882
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 109/239 (45%), Gaps = 28/239 (11%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PRG + + V + +QV +D T +G FG N L P + + +I
Sbjct: 589 PRGRPIVNYDRSVCLPNRLPELQVKSTDVTILGYFGE--NNPDNLCRPWGLTCDHEGNII 646
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
+SD +N+R+QI ++ DGT + KFG GN Q P IAV R+IV D +N
Sbjct: 647 ISDRSNNRIQI-------YREDGTLIRKFGCYGNGPCQFNRPAGIAVDARRRLIVVDKDN 699
Query: 220 HRV-------------------QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
HRV QI G + SFG G ++GQ +P VAV+ I+
Sbjct: 700 HRVQCISKLSFGYNHNDEIIVFQILTTEGEFLRSFGEHGEKQGQFCYPWDVAVNSVCEIA 759
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V D+ N+R+Q+F+P+G LR FG G+ G ++V D NH + +
Sbjct: 760 VTDTRNHRVQLFSPEGIPLRMFGGQAHQLRYLDSPRGICFNPEGKLVVTDFNNHHVLII 818
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 129/300 (43%), Gaps = 51/300 (17%)
Query: 52 PGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL--KTNCV---FLAFTWPRGIAVG 106
P P G+ + +I+++D SN+R+Q+ L K C F P GIAV
Sbjct: 628 PDNLCRPWGLTCDHEGNIIISDRSNNRIQIYREDGTLIRKFGCYGNGPCQFNRPAGIAVD 687
Query: 107 PDNSIVVADSSNHRVQ----------------VFQ---SDGTFVGKFGSMGNKAGQLEHP 147
++V D NHRVQ VFQ ++G F+ FG G K GQ +P
Sbjct: 688 ARRRLIVVDKDNHRVQCISKLSFGYNHNDEIIVFQILTTEGEFLRSFGEHGEKQGQFCYP 747
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
+AV++ + V+D+ NHRVQ+F +G + FG ++ L+ P I +
Sbjct: 748 WDVAVNSVCEIAVTDTRNHRVQLF-------SPEGIPLRMFGGQAHQLRYLDSPRGICFN 800
Query: 208 NTNRVIVSDSNNHRVQIFDVN---GRVIT--------------SFGSEGSEEGQLKFPRG 250
+++V+D NNH V I + N R++ + G + P+G
Sbjct: 801 PEGKLVVTDFNNHHVLIIEYNMTESRILKCEKESKCRRQDGENNDGQNDENTPTFQRPQG 860
Query: 251 VAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
V D G I V DS +N I+ F G L ++ G E G+A+ +G + D
Sbjct: 861 VIAADDGSILVADSRHNSIKAFNSLGSLLYSY---KPGQEEMDRPLGIALHWDGRMTFTD 917
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 37/262 (14%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC------FPHFD-------LKT 90
K G G+ P F P GIAV ++V D NHRVQ + H D L T
Sbjct: 667 KFGCYGNGPCQFNRPAGIAVDARRRLIVVDKDNHRVQCISKLSFGYNHNDEIIVFQILTT 726
Query: 91 NCVFL-----------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGN 139
FL F +P +AV I V D+ NHRVQ+F +G + FG +
Sbjct: 727 EGEFLRSFGEHGEKQGQFCYPWDVAVNSVCEIAVTDTRNHRVQLFSPEGIPLRMFGGQAH 786
Query: 140 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN---GRVFQSDGTFVGKFGSMGNKAG 196
+ L+ P I + +++V+D NNH V I + N R+ + + + N G
Sbjct: 787 QLRYLDSPRGICFNPEGKLVVTDFNNHHVLIIEYNMTESRILKCEKESKCRRQDGENNDG 846
Query: 197 Q-------LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
Q + P + ++ ++V+DS ++ ++ F+ G ++ S+ G EE + P
Sbjct: 847 QNDENTPTFQRPQGVIAADDGSILVADSRHNSIKAFNSLGSLLYSYKP-GQEE--MDRPL 903
Query: 250 GVAVDDQGYISVGDSGNNRIQI 271
G+A+ G ++ D G N +++
Sbjct: 904 GIALHWDGRMTFTDYGRNYVRL 925
>gi|407464351|ref|YP_006775233.1| NHL repeat-containing protein [Candidatus Nitrosopumilus sp. AR2]
gi|407047539|gb|AFS82291.1| NHL repeat-containing protein [Candidatus Nitrosopumilus sp. AR2]
Length = 521
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 121/220 (55%), Gaps = 11/220 (5%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P+ +AVG D SI V D N R+Q F S G ++ +G+ G + G +P IAV N++
Sbjct: 46 FAHPQFVAVGDDGSIYVTDFGNKRIQKFSSTGEYLTHWGNSGKQLGDFYNPSGIAV-NSD 104
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ V+D + +RVQ F + DG F+ +G+ G GQ +P+ I V+N + V V D
Sbjct: 105 SIFVADRDLNRVQKFSL-------DGEFIHTWGNKGTAEGQFFYPNGITVNN-DLVYVVD 156
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ N R+QIF +G ++SFGS G GQ G+ D+ G + V D GNN+I+ F DG
Sbjct: 157 TGNQRIQIFSTDGEFVSSFGSSGLGPGQFLNVIGIDSDENGNLYVTDKGNNKIEKFNSDG 216
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+F+++F + S E + V G++ V + N RI
Sbjct: 217 KFIQSFPFYSS--NYVFSPEAITVDPLGDLFVVNSANDRI 254
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 119/211 (56%), Gaps = 10/211 (4%)
Query: 110 SIVVADSSNHRVQVFQSDGTFVGKFGSMG-NKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
S ++ SS + D + K+G G + HP ++AV + + V+D N R+
Sbjct: 11 SAILLSSSFAQTSFGSGDYDLLHKWGEHGPTEPSHFAHPQFVAVGDDGSIYVTDFGNKRI 70
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
Q F S G ++ +G+ G + G +P IAV N++ + V+D + +RVQ F ++
Sbjct: 71 Q-------KFSSTGEYLTHWGNSGKQLGDFYNPSGIAV-NSDSIFVADRDLNRVQKFSLD 122
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G I ++G++G+ EGQ +P G+ V++ + V D+GN RIQIF+ DG+F+ +FG G G
Sbjct: 123 GEFIHTWGNKGTAEGQFFYPNGITVNND-LVYVVDTGNQRIQIFSTDGEFVSSFGSSGLG 181
Query: 289 DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F + G+ NGN+ V D+ N++I+ F
Sbjct: 182 PGQFLNVIGIDSDENGNLYVTDKGNNKIEKF 212
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 137/286 (47%), Gaps = 18/286 (6%)
Query: 41 LQFKIGSRG-SEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC-----VF 94
L K G G +EP F P+ +AVG D SI V D N R+Q + T+
Sbjct: 31 LLHKWGEHGPTEPSHFAHPQFVAVGDDGSIYVTDFGNKRIQKFSSTGEYLTHWGNSGKQL 90
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F P GIAV D SI VAD +RVQ F DG F+ +G+ G GQ +P+ I V+N
Sbjct: 91 GDFYNPSGIAVNSD-SIFVADRDLNRVQKFSLDGEFIHTWGNKGTAEGQFFYPNGITVNN 149
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ V V D+ N R+QI F +DG FV FGS G GQ + I + V
Sbjct: 150 -DLVYVVDTGNQRIQI-------FSTDGEFVSSFGSSGLGPGQFLNVIGIDSDENGNLYV 201
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+D N++++ F+ +G+ I SF S + P + VD G + V +S N+RI +
Sbjct: 202 TDKGNNKIEKFNSDGKFIQSFPFYSSN--YVFSPEAITVDPLGDLFVVNSANDRILHLSQ 259
Query: 275 DGQFLRAFGCW-GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ + G F+ + +A+ NG +LV D H IQ+F
Sbjct: 260 NSSLKLSLADQNGPYPDSFENISDIAIGINGELLVIDSPTHSIQLF 305
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 90/226 (39%), Gaps = 46/226 (20%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC-----FPHFDLKTNCVFLAFTWP 100
G+ G + G F P GIAV D SI VAD +RVQ F H F +P
Sbjct: 84 GNSGKQLGDFYNPSGIAVNSD-SIFVADRDLNRVQKFSLDGEFIHTWGNKGTAEGQFFYP 142
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
GI V D + V D+ N R+Q+F +DG FV FGS G GQ + I + V
Sbjct: 143 NGITVNND-LVYVVDTGNQRIQIFSTDGEFVSSFGSSGLGPGQFLNVIGIDSDENGNLYV 201
Query: 161 SDSNNHRVQIFDVNGR------------VFQSDGTFVGKFGSM----------------- 191
+D N++++ F+ +G+ VF + V G +
Sbjct: 202 TDKGNNKIEKFNSDGKFIQSFPFYSSNYVFSPEAITVDPLGDLFVVNSANDRILHLSQNS 261
Query: 192 ----------GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 227
G E+ IA+ ++V DS H +Q+F+
Sbjct: 262 SLKLSLADQNGPYPDSFENISDIAIGINGELLVIDSPTHSIQLFET 307
>gi|308461229|ref|XP_003092909.1| CRE-NCL-1 protein [Caenorhabditis remanei]
gi|308252073|gb|EFO96025.1| CRE-NCL-1 protein [Caenorhabditis remanei]
Length = 988
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 122/220 (55%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT- 155
FT P G+AV IVVAD++NHR+QVF +G F +FG G + GQL +P+ +AV+ T
Sbjct: 724 FTEPSGVAVNGQGDIVVADTNNHRIQVFDKEGRFKFQFGECGKRDGQLLYPNRVAVNRTT 783
Query: 156 -NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ V+ S H++Q+++ G+ F+ KFG A L+HP + V N R+IV
Sbjct: 784 GDFVVTERSPTHQIQVYNQYGQ-------FLRKFG-----ANILQHPRGVCVDNKGRIIV 831
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD+ G ++ F S L+FP GV +D+ I + D+ + I++F+
Sbjct: 832 VECKVMRVIIFDMFGNILQKF----SCSRYLEFPNGVCTNDKSEILISDNRAHCIKVFSY 887
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G+G GV + S G ++V D N+
Sbjct: 888 EGQYLRQIG----GEGVTNYPIGVGINSLGEVVVADNHNN 923
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 143/301 (47%), Gaps = 42/301 (13%)
Query: 32 RSQYLQKRRL-QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT 90
RSQ + + + K G G G FT P G+AV IVVAD++NHR+QV FD +
Sbjct: 700 RSQIKRTKMIYHCKFGEFGVMEGQFTEPSGVAVNGQGDIVVADTNNHRIQV----FDKEG 755
Query: 91 NCVFL---------AFTWPRGIAVGPDNS--IVVADSSNHRVQVFQSDGTFVGKFGSMGN 139
F +P +AV +V S H++QV+ G F+ KFG
Sbjct: 756 RFKFQFGECGKRDGQLLYPNRVAVNRTTGDFVVTERSPTHQIQVYNQYGQFLRKFG---- 811
Query: 140 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE 199
A L+HP + V N R+IV + RV IFD+ G + Q KF + LE
Sbjct: 812 -ANILQHPRGVCVDNKGRIIVVECKVMRVIIFDMFGNILQ-------KFSC----SRYLE 859
Query: 200 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYI 259
P+ + ++ + +++SD+ H +++F G+ + G EG +P GV ++ G +
Sbjct: 860 FPNGVCTNDKSEILISDNRAHCIKVFSYEGQYLRQIGGEGVT----NYPIGVGINSLGEV 915
Query: 260 SVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
V D+ NN + +F+ DG + A F VA++ +G++++ ++ +R+ +
Sbjct: 916 VVADNHNNFNLTVFSQDGTMIGALESRVKHAQCFD----VALVDDGSVVLASKD-YRLYL 970
Query: 319 F 319
+
Sbjct: 971 Y 971
>gi|260785754|ref|XP_002587925.1| hypothetical protein BRAFLDRAFT_87313 [Branchiostoma floridae]
gi|229273080|gb|EEN43936.1| hypothetical protein BRAFLDRAFT_87313 [Branchiostoma floridae]
Length = 830
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 36/286 (12%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ------VCFPHFDLKTNCVFLAFTW 99
G +GSEPG F +PRG+ V P N I VAD N RVQ V HF
Sbjct: 566 GGKGSEPGKFYYPRGVVVSPSNEIFVADKDNRRVQVHSTEGVYLRHFPTAVPGTGDIVMG 625
Query: 100 PRGIAVGPDNSIVVAD---SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
P + + + ++ V S++H VQ + +DGT + +F LE Y +
Sbjct: 626 PHDVCMDGNGTLWVVGEGGSADHVVQ-YSTDGTAMARF--------DLEKDRY------D 670
Query: 157 RVIVSDSNNHRVQIFD-VNGRV--FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
R I D N+ + + D + G V F+ +G+ V + G++ HP Y+ V ++
Sbjct: 671 RGITVDMRNNHILVTDPLPGAVLVFRPNGSLVRTVRH--PRGGEMTHPQYVTVDGEGNIL 728
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
VSD NN+ V ++D + + + FG EGS EGQL P G+ D G+I V D + R+QIFT
Sbjct: 729 VSDWNNNYVYVYDESRKFLFQFGGEGSGEGQLASPNGICTDSSGHILVVDFRSRRVQIFT 788
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F+R EF+ EG+AV G ++V + +H + V+
Sbjct: 789 RHGEFVRTVRT------EFRP-EGLAVGPEGQLVVTNYLDHVMTVY 827
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 57/233 (24%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI----------------------- 170
FG G++ G+ +P + VS +N + V+D +N RVQ+
Sbjct: 565 FGGKGSEPGKFYYPRGVVVSPSNEIFVADKDNRRVQVHSTEGVYLRHFPTAVPGTGDIVM 624
Query: 171 ------FDVNGRV--------------FQSDGTFVGKFGSMGNKAGQLEHPHY---IAVS 207
D NG + + +DGT + +F LE Y I V
Sbjct: 625 GPHDVCMDGNGTLWVVGEGGSADHVVQYSTDGTAMARF--------DLEKDRYDRGITVD 676
Query: 208 -NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
N ++V+D V +F NG ++ + G++ P+ V VD +G I V D N
Sbjct: 677 MRNNHILVTDPLPGAVLVFRPNGSLVRTV--RHPRGGEMTHPQYVTVDGEGNILVSDWNN 734
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
N + ++ +FL FG GSG+G+ G+ S+G+ILV D + R+Q+F
Sbjct: 735 NYVYVYDESRKFLFQFGGEGSGEGQLASPNGICTDSSGHILVVDFRSRRVQIF 787
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
D+ VIT FG +GSE G+ +PRGV V I V D N R+Q+ + +G +LR F
Sbjct: 557 DLKQPVIT-FGGKGSEPGKFYYPRGVVVSPSNEIFVADKDNRRVQVHSTEGVYLRHFPTA 615
Query: 286 GSGDGEF-KGLEGVAVMSNGNILVC 309
G G+ G V + NG + V
Sbjct: 616 VPGTGDIVMGPHDVCMDGNGTLWVV 640
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + R+ F+ G GS G P GI I+V D + RVQ+ H + V
Sbjct: 740 YDESRKFLFQFGGEGSGEGQLASPNGICTDSSGHILVVDFRSRRVQIFTRHGEF-VRTVR 798
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
F P G+AVGP+ +VV + +H + V+
Sbjct: 799 TEFR-PEGLAVGPEGQLVVTNYLDHVMTVY 827
>gi|417303472|ref|ZP_12090527.1| NHL repeat containing protein [Rhodopirellula baltica WH47]
gi|327540245|gb|EGF26834.1| NHL repeat containing protein [Rhodopirellula baltica WH47]
Length = 332
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 158/336 (47%), Gaps = 36/336 (10%)
Query: 4 PSEAKNINSCFLLQTLLVSGIGQVGTTPRSQYLQKR---RLQFKIGSRGSEPGCFTWPRG 60
P+E+K ++ Q L+ +G T + + + G RG G F PR
Sbjct: 9 PAESKPVDRRQACQRLMAGATSLMGLTTLNGCVASAFGGTPELVWGRRGFSDGRFLKPRA 68
Query: 61 IAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW---------PRGIAV-GPDNS 110
+A+ PD+ + + D++ R+QV FD + TW P G+ G N
Sbjct: 69 MAIDPDDQLYIVDTTG-RIQV----FDADGQHLR---TWTTPETNNGRPTGMVFDGAKNR 120
Query: 111 IVVADSSNHRVQVFQSDGTFVGKF---GSMGNKAGQLEHPHYIAVSNTNRVIVSD-SNNH 166
++VAD+ +R+ F G + + G+ GN AG+ IAV + + + +
Sbjct: 121 LLVADTHYYRMLAFTPTGDLLPEDQIGGTSGNGAGEFAFVTDIAVDGDGCLYIGEYGASD 180
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
R+Q FD DGTF+ ++G G + P + + + ++D+ NHRVQ +D
Sbjct: 181 RIQRFD-------PDGTFMAQWGGTGREVQHFVRPQSLVIHEKT-LWIADACNHRVQRYD 232
Query: 227 VNG---RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
++ R I S+G EG + G+ +P G+AVD G + V + GN R+Q TPDG+ + ++G
Sbjct: 233 ISTTEPRWIGSWGQEGKQLGEFYYPYGIAVDPDGTVLVCEFGNQRVQRLTPDGEPISSWG 292
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ G+ V S + V D NHR+Q F
Sbjct: 293 APGHDPGQLYEPWGLVVDSRRRVHVLDSNNHRVQRF 328
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 14/222 (6%)
Query: 64 GPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--------FTWPRGIAVGPDNSIVVAD 115
G N ++VAD+ +R+ P DL F + IAV D + + +
Sbjct: 116 GAKNRLLVADTHYYRMLAFTPTGDLLPEDQIGGTSGNGAGEFAFVTDIAVDGDGCLYIGE 175
Query: 116 -SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 174
++ R+Q F DGTF+ ++G G + P + + + ++D+ NHRVQ +D++
Sbjct: 176 YGASDRIQRFDPDGTFMAQWGGTGREVQHFVRPQSLVIHEKT-LWIADACNHRVQRYDIS 234
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
++ ++G +G G + G+ +P+ IAV V+V + N RVQ +G I+S
Sbjct: 235 ----TTEPRWIGSWGQEGKQLGEFYYPYGIAVDPDGTVLVCEFGNQRVQRLTPDGEPISS 290
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+G+ G + GQL P G+ VD + + V DS N+R+Q FT G
Sbjct: 291 WGAPGHDPGQLYEPWGLVVDSRRRVHVLDSNNHRVQRFTLPG 332
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 24 IGQVGTTPRSQYLQKR-RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
IG+ G + R Q + G G E F P+ + + + ++ +AD+ NHRVQ
Sbjct: 173 IGEYGASDRIQRFDPDGTFMAQWGGTGREVQHFVRPQSLVIH-EKTLWIADACNHRVQ-- 229
Query: 83 FPHFDLKTNCVFLAFTW------------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTF 130
+D+ T +W P GIAV PD +++V + N RVQ DG
Sbjct: 230 --RYDISTTEPRWIGSWGQEGKQLGEFYYPYGIAVDPDGTVLVCEFGNQRVQRLTPDGEP 287
Query: 131 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 175
+ +G+ G+ GQL P + V + RV V DSNNHRVQ F + G
Sbjct: 288 ISSWGAPGHDPGQLYEPWGLVVDSRRRVHVLDSNNHRVQRFTLPG 332
>gi|32476637|ref|NP_869631.1| ring finger protein HAC1 [Rhodopirellula baltica SH 1]
gi|32447183|emb|CAD77009.1| ring finger protein HAC1 [Rhodopirellula baltica SH 1]
Length = 349
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 157/336 (46%), Gaps = 36/336 (10%)
Query: 4 PSEAKNINSCFLLQTLLVSGIGQVGTTPRSQYLQKR---RLQFKIGSRGSEPGCFTWPRG 60
P+E+K ++ Q L+ +G T + + + G RG G F PR
Sbjct: 26 PAESKPVDRRQACQRLMAGATSLMGLTTLNGCVASAFGGTPELVWGRRGFSDGRFLKPRA 85
Query: 61 IAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW---------PRGIAV-GPDNS 110
+A+ PD+ + + D++ R+QV FD + TW P G+ G N
Sbjct: 86 MAIDPDDQLYIVDTTG-RIQV----FDADGQHLR---TWTTPETNNGRPTGMVFDGAKNR 137
Query: 111 IVVADSSNHRVQVFQSDGTFVGKF---GSMGNKAGQLEHPHYIAVSNTNRVIVSD-SNNH 166
++VAD+ +R+ F G + + G+ GN AG+ IAV + + + +
Sbjct: 138 LLVADTHYYRMLAFTPTGELLPEDQIGGTSGNGAGEFAFVTDIAVDGDGCLYIGEYGASD 197
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
R+Q FD DGTF+ ++G G + P + + + ++D+ NHRVQ +D
Sbjct: 198 RIQRFD-------PDGTFMAQWGGTGREVQHFVRPQSLVIHEKT-LWIADACNHRVQRYD 249
Query: 227 VNG---RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
++ R I S+G EG + G +P G+AVD G + V + GN R+Q TPDG+ + ++G
Sbjct: 250 ISTTEPRWIGSWGQEGKQLGDFYYPYGIAVDPDGTVLVCEFGNQRVQRLTPDGEPISSWG 309
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ G+ V S + V D NHR+Q F
Sbjct: 310 APGHDPGQLYEPWGLVVDSRRRVHVLDSNNHRVQRF 345
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 24 IGQVGTTPRSQYLQKR-RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
IG+ G + R Q + G G E F P+ + + + ++ +AD+ NHRVQ
Sbjct: 190 IGEYGASDRIQRFDPDGTFMAQWGGTGREVQHFVRPQSLVIH-EKTLWIADACNHRVQ-- 246
Query: 83 FPHFDLKTNCVFLAFTW------------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTF 130
+D+ T +W P GIAV PD +++V + N RVQ DG
Sbjct: 247 --RYDISTTEPRWIGSWGQEGKQLGDFYYPYGIAVDPDGTVLVCEFGNQRVQRLTPDGEP 304
Query: 131 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 175
+ +G+ G+ GQL P + V + RV V DSNNHRVQ F + G
Sbjct: 305 ISSWGAPGHDPGQLYEPWGLVVDSRRRVHVLDSNNHRVQRFTLPG 349
>gi|260785728|ref|XP_002587912.1| hypothetical protein BRAFLDRAFT_87300 [Branchiostoma floridae]
gi|229273067|gb|EEN43923.1| hypothetical protein BRAFLDRAFT_87300 [Branchiostoma floridae]
Length = 898
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 137/287 (47%), Gaps = 27/287 (9%)
Query: 26 QVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ----- 80
+V R+ +++R + F G GSEPG F +PRG+ V P N I VAD N RVQ
Sbjct: 476 KVAAAGRTGDMEQRVIAF--GGYGSEPGKFRFPRGVLVSPSNEIFVADRLNRRVQFHNTK 533
Query: 81 -VCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGS 136
V HF P + + + + V +++ H VQ + +DGT + F
Sbjct: 534 GVYLRHFPTVVPGTGRKVMKPYDVCMDGNGKLWVVGWGETAEHVVQ-YSTDGTAMAGFDL 592
Query: 137 MGNKAGQLEHPHYIAVS-NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA 195
N H IAV TN V+V+D+ N +Q VF+ DG+ V +A
Sbjct: 593 KRNV-----HFRGIAVDMRTNHVLVTDAENSEIQ-------VFRPDGSLVRTVRH--PRA 638
Query: 196 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD 255
G++ P Y+ V ++V+D N V ++D +G+ + FG +G EGQ+ P G+ D
Sbjct: 639 GEMTRPTYVTVDREGNILVTDWYNDYVYMYDESGKFLFQFGGKGKGEGQMSDPHGICTDS 698
Query: 256 QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMS 302
G+I V DS N R+QIFT G+F+R G G EG V S
Sbjct: 699 SGHILVADSVNERVQIFTRHGEFVRTVSAGFKPTGLAVGPEGQLVGS 745
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 20/228 (8%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG-QLEHPHYIAVSNT 155
F +PRG+ V P N I VAD N RVQ + G ++ F ++ G ++ P+ + +
Sbjct: 503 FRFPRGVLVSPSNEIFVADRLNRRVQFHNTKGVYLRHFPTVVPGTGRKVMKPYDVCMDGN 562
Query: 156 NRVIV---SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNR 211
++ V ++ H VQ + +DGT + F N H IAV TN
Sbjct: 563 GKLWVVGWGETAEHVVQ--------YSTDGTAMAGFDLKRNV-----HFRGIAVDMRTNH 609
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
V+V+D+ N +Q+F +G ++ + + G++ P V VD +G I V D N+ + +
Sbjct: 610 VLVTDAENSEIQVFRPDGSLVRTVRHPRA--GEMTRPTYVTVDREGNILVTDWYNDYVYM 667
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ G+FL FG G G+G+ G+ S+G+ILV D N R+Q+F
Sbjct: 668 YDESGKFLFQFGGKGKGEGQMSDPHGICTDSSGHILVADSVNERVQIF 715
>gi|260785726|ref|XP_002587911.1| hypothetical protein BRAFLDRAFT_87299 [Branchiostoma floridae]
gi|229273066|gb|EEN43922.1| hypothetical protein BRAFLDRAFT_87299 [Branchiostoma floridae]
Length = 729
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 137/287 (47%), Gaps = 40/287 (13%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTW 99
G GSEPG F PRG+ V P N I VAD N RVQV HF +
Sbjct: 467 GGEGSEPGKFRIPRGVVVSPSNEIFVADHVNRRVQVHSTEGVYLRHFPTVVSGTGDKDMQ 526
Query: 100 PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY---IAVS 153
P + + + ++ V ++++H VQ + +DGT + F L+ Y IAV
Sbjct: 527 PYDVCMDTNGTLWVVGEGETADHVVQ-YSTDGTAMAGFN--------LKKSIYFRGIAVD 577
Query: 154 -NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
TN ++V+D++ V+ VF+ DG+ V ++ + G++ P YI V
Sbjct: 578 MRTNHILVTDADQGEVE-------VFRPDGSLVR---TVRHPRGEMTRPTYITVDGEGNF 627
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+VSD + H V ++D +G+ + FG EGS EGQL P G+ D G+I D N R+QIF
Sbjct: 628 LVSDWDTHCVYVYDESGKFLFQFGGEGSGEGQLTGPAGICTDSSGHILAADYDNKRVQIF 687
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
T G+F+R F +G G EG LV NH + VF
Sbjct: 688 TRHGKFVRTFRTRFKPNGLTVGPEGQ--------LVVTSHNHTVTVF 726
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 58/233 (24%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI----------------------- 170
FG G++ G+ P + VS +N + V+D N RVQ+
Sbjct: 466 FGGEGSEPGKFRIPRGVVVSPSNEIFVADHVNRRVQVHSTEGVYLRHFPTVVSGTGDKDM 525
Query: 171 ------FDVNGRV--------------FQSDGTFVGKFGSMGNKAGQLEHPHY---IAVS 207
D NG + + +DGT + F L+ Y IAV
Sbjct: 526 QPYDVCMDTNGTLWVVGEGETADHVVQYSTDGTAMAGF--------NLKKSIYFRGIAVD 577
Query: 208 -NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
TN ++V+D++ V++F +G ++ + G++ P + VD +G V D
Sbjct: 578 MRTNHILVTDADQGEVEVFRPDGSLVRTV---RHPRGEMTRPTYITVDGEGNFLVSDWDT 634
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ + ++ G+FL FG GSG+G+ G G+ S+G+IL D +N R+Q+F
Sbjct: 635 HCVYVYDESGKFLFQFGGEGSGEGQLTGPAGICTDSSGHILAADYDNKRVQIF 687
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGC- 284
D+ VIT FG EGSE G+ + PRGV V I V D N R+Q+ + +G +LR F
Sbjct: 458 DLKQGVIT-FGGEGSEPGKFRIPRGVVVSPSNEIFVADHVNRRVQVHSTEGVYLRHFPTV 516
Query: 285 -WGSGDGEFKGLEGVAVMSNGNILVC 309
G+GD + + + V + +NG + V
Sbjct: 517 VSGTGDKDMQPYD-VCMDTNGTLWVV 541
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G GS G T P GI I+ AD N RVQ+ H K F
Sbjct: 640 YDESGKFLFQFGGEGSGEGQLTGPAGICTDSSGHILAADYDNKRVQIFTRHG--KFVRTF 697
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
P G+ VGP+ +VV S NH V VF
Sbjct: 698 RTRFKPNGLTVGPEGQLVVT-SHNHTVTVF 726
>gi|296132542|ref|YP_003639789.1| NHL repeat containing protein [Thermincola potens JR]
gi|296031120|gb|ADG81888.1| NHL repeat containing protein [Thermincola potens JR]
Length = 332
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 141/285 (49%), Gaps = 35/285 (12%)
Query: 51 EPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----------FTW 99
EPG + P G+AV + VADS+NHRV V FD N F A F +
Sbjct: 65 EPGVMSRPLGVAVSEWGDVFVADSANHRVAV----FD--ANGAFKAVLGKQGAGPGEFNY 118
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKF--GSMGNKAGQLEHPHYIAVSNTNR 157
P GIAV I VAD N RVQV DG + G + G P +AV +
Sbjct: 119 PTGIAV-YGRKIYVADFYNRRVQVLNFDGKQLSVLPRGKDLRELGGNIFPVTVAVDRSGN 177
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSD 216
V VSD + HR+ +FD +GR FV FG G+ G+L + + IAV+ + + +++
Sbjct: 178 VYVSDVSQHRIVVFDDSGR-------FVRYFGRAGSNPGELSYVNGIAVNEDAGEIYLAN 230
Query: 217 SNNHRVQIFDVNGRVITS-FGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIFTP 274
SNN R+ FD+NGR + +G+ P+GVA ++ G + V D+ ++I +
Sbjct: 231 SNNGRIDTFDLNGRYLPDRISGKGAAN-----PKGVAFEETSGNLYVADTLAHKIHVLDK 285
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G + G G G+F VAV + G I V DREN+RIQVF
Sbjct: 286 QGNEIETIGQRGLDIGQFNFPTAVAVDNRGRIYVADRENNRIQVF 330
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 122/239 (51%), Gaps = 25/239 (10%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--------- 95
+G +G+ PG F +P GIAV I VAD N RVQV +FD K V
Sbjct: 106 LGKQGAGPGEFNYPTGIAV-YGRKIYVADFYNRRVQVL--NFDGKQLSVLPRGKDLRELG 162
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-N 154
+P +AV ++ V+D S HR+ VF G FV FG G+ G+L + + IAV+ +
Sbjct: 163 GNIFPVTVAVDRSGNVYVSDVSQHRIVVFDDSGRFVRYFGRAGSNPGELSYVNGIAVNED 222
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVI 213
+ +++SNN R+ FD+NGR GK + +P +A T+ +
Sbjct: 223 AGEIYLANSNNGRIDTFDLNGRYLPD--RISGKGAA---------NPKGVAFEETSGNLY 271
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V+D+ H++ + D G I + G G + GQ FP VAVD++G I V D NNRIQ+F
Sbjct: 272 VADTLAHKIHVLDKQGNEIETIGQRGLDIGQFNFPTAVAVDNRGRIYVADRENNRIQVF 330
>gi|193083077|ref|NP_001122371.1| zinc finger protein ZF(Bbox/RING)-1 [Ciona intestinalis]
gi|93002986|tpd|FAA00076.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 845
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--- 96
+L ++G +G G F +A+ N ++ AD ++Q+ P + K + V
Sbjct: 445 KLVVQLGKQGIADGEFESTPNLAINSVNEVITADYDGAKIQIFDPQGNFKDSFVTEVNKR 504
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
P GIA+ ++ IVV +V ++ +G V FG GQ + IAV++ N
Sbjct: 505 MCKPAGIAILDNDDIVVC--CEDQVHIWTHEGKSVLGFGK-----GQFGNCSSIAVNSEN 557
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
R++V+D H + +F G++ +FG+ G +L P Y+A + N +IVSD
Sbjct: 558 RIVVADVGKHCISVFTDTGKMLL-------QFGAQGKGESKLVEPRYVACDSQNNIIVSD 610
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ V+ F G + SFG+EG E GQ + PRG+ D+ I V D N+R+ IFTPDG
Sbjct: 611 GGDCSVKKFSSQGEFLLSFGAEGPERGQFQGPRGLCTDEHDNILVADCWNHRVDIFTPDG 670
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
F+R +G +++ +NG +++
Sbjct: 671 CFMRHI---ATGADSLHFPWCISLTTNGKLII 699
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 16/223 (7%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F +A+ N ++ AD ++Q+F G F F + NK ++ P IA+ + +
Sbjct: 460 FESTPNLAINSVNEVITADYDGAKIQIFDPQGNFKDSFVTEVNK--RMCKPAGIAILDND 517
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++V + Q+ ++ +G V FG GQ + IAV++ NR++V+D
Sbjct: 518 DIVVCCED----QV-----HIWTHEGKSVLGFGK-----GQFGNCSSIAVNSENRIVVAD 563
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
H + +F G+++ FG++G E +L PR VA D Q I V D G+ ++ F+ G
Sbjct: 564 VGKHCISVFTDTGKMLLQFGAQGKGESKLVEPRYVACDSQNNIIVSDGGDCSVKKFSSQG 623
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+FL +FG G G+F+G G+ + NILV D NHR+ +F
Sbjct: 624 EFLLSFGAEGPERGQFQGPRGLCTDEHDNILVADCWNHRVDIF 666
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 24 IGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF 83
+ VG S + ++ + G++G PR +A N+I+V+D + V+
Sbjct: 561 VADVGKHCISVFTDTGKMLLQFGAQGKGESKLVEPRYVACDSQNNIIVSDGGDCSVK--- 617
Query: 84 PHFDLKTNCVFL-----------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVG 132
+ FL F PRG+ ++I+VAD NHRV +F DG F+
Sbjct: 618 ---KFSSQGEFLLSFGAEGPERGQFQGPRGLCTDEHDNILVADCWNHRVDIFTPDGCFMR 674
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ A L P I+++ ++I+S
Sbjct: 675 HIAT---GADSLHFPWCISLTTNGKLIIS 700
>gi|400756551|ref|NP_952838.2| NHL repeat domain-containing protein [Geobacter sulfurreducens PCA]
gi|409912309|ref|YP_006890774.1| NHL repeat domain-containing protein [Geobacter sulfurreducens
KN400]
gi|298505900|gb|ADI84623.1| NHL repeat domain lipoprotein [Geobacter sulfurreducens KN400]
gi|399107862|gb|AAR35165.2| NHL repeat domain lipoprotein [Geobacter sulfurreducens PCA]
Length = 354
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 142/302 (47%), Gaps = 18/302 (5%)
Query: 21 VSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSN---H 77
+SG QV P + R L+F G + F P G+ + V+DSS+ H
Sbjct: 60 ISGPEQVKAEPGAI---ARFLEFVTGEQFKH-VPFVTPYGVVSDGGTLLFVSDSSSGVVH 115
Query: 78 RVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
R+ + + P G+A+ P + V+DS N +V VF DG F+ +
Sbjct: 116 RIDLARQKVSYIVRAGDEFLSSPVGLALSPSGDLYVSDSVNAKVYVFSRDGEFLR---VL 172
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
+ + P +AV++ + V D H++++F+V+GR F+G F + G+
Sbjct: 173 ADGQVDFKRPAGLAVNSKGVLFVVDVLAHKLKVFNVSGR-------FLGDFPP-DDIGGK 224
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
L P ++AV ++V V+D+ N V+++D GR + S G G G PRGVAVD
Sbjct: 225 LNLPSHVAVDKDDKVYVTDALNFTVKVYDSAGRYLRSIGEIGDAPGSFARPRGVAVDSDL 284
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
+ V D+ + QIF +GQ L G G GEF G+ + N I + D N R+Q
Sbjct: 285 NVYVIDAAFDNFQIFNQEGQLLLFVGKPGKKSGEFYMPSGIHIDRNDRIFISDSYNRRVQ 344
Query: 318 VF 319
VF
Sbjct: 345 VF 346
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 21/181 (11%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVC---------FPHFDLKTNCVFLAFTWPRGIAV 105
F P G+AV + V D H+++V FP D+ P +AV
Sbjct: 179 FKRPAGLAVNSKGVLFVVDVLAHKLKVFNVSGRFLGDFPPDDIGGKL-----NLPSHVAV 233
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
D+ + V D+ N V+V+ S G ++ G +G+ G P +AV + V V D+
Sbjct: 234 DKDDKVYVTDALNFTVKVYDSAGRYLRSIGEIGDAPGSFARPRGVAVDSDLNVYVIDAAF 293
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
QIF+ G++ FVGK G K+G+ P I + +R+ +SDS N RVQ+F
Sbjct: 294 DNFQIFNQEGQLL----LFVGK---PGKKSGEFYMPSGIHIDRNDRIFISDSYNRRVQVF 346
Query: 226 D 226
+
Sbjct: 347 E 347
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-----------AFTWPR 101
G P +AV D+ + V D+ N V+V + +L +F PR
Sbjct: 223 GKLNLPSHVAVDKDDKVYVTDALNFTVKVY------DSAGRYLRSIGEIGDAPGSFARPR 276
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
G+AV D ++ V D++ Q+F +G + G G K+G+ P I + +R+ +S
Sbjct: 277 GVAVDSDLNVYVIDAAFDNFQIFNQEGQLLLFVGKPGKKSGEFYMPSGIHIDRNDRIFIS 336
Query: 162 DSNNHRVQIFD 172
DS N RVQ+F+
Sbjct: 337 DSYNRRVQVFE 347
>gi|195581226|ref|XP_002080435.1| GD10251 [Drosophila simulans]
gi|194192444|gb|EDX06020.1| GD10251 [Drosophila simulans]
Length = 774
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 99/180 (55%), Gaps = 16/180 (8%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ V ++V+D N+RVQVF DG+ KFG G G+ + P I V NR+I
Sbjct: 553 PWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDLPAGICVDVDNRII 612
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D +NHRVQIF + G F+ KFGS G + GQ ++P +AV++ +++V+DS N
Sbjct: 613 VVDKDNHRVQIF-------TASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIVVTDSRN 665
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HR+Q FD GR I P G+ D++G I V DS N RI +F + F+
Sbjct: 666 HRIQQFDSEGRFIRQI---------FNRPSGLCCDEEGRIIVADSKNQRILVFNQNLDFM 716
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 98/186 (52%), Gaps = 16/186 (8%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
F + G++ GQ+ P + V V+VSD N+RVQ VF DG+ KFG G
Sbjct: 540 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQ-------VFNPDGSLKFKFGRKGV 592
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
G+ + P I V NR+IV D +NHRVQIF +G + FGS G E GQ ++P VAV
Sbjct: 593 GNGEFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAV 652
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
+ + I V DS N+RIQ F +G+F+R F G+ G I+V D +N
Sbjct: 653 NSRRQIVVTDSRNHRIQQFDSEGRFIRQI---------FNRPSGLCCDEEGRIIVADSKN 703
Query: 314 HRIQVF 319
RI VF
Sbjct: 704 QRILVF 709
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 98/193 (50%), Gaps = 21/193 (10%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L + G E G + P G+ V ++V+D N+RVQV P LK
Sbjct: 536 LSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNG 595
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GI V DN I+V D NHRVQ+F + G F+ KFGS G + GQ ++P +AV++
Sbjct: 596 EFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSR 655
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+++V+DS NHR+Q FD S+G F+ + P + R+IV+
Sbjct: 656 RQIVVTDSRNHRIQQFD-------SEGRFIRQI---------FNRPSGLCCDEEGRIIVA 699
Query: 216 DSNNHRVQIFDVN 228
DS N R+ +F+ N
Sbjct: 700 DSKNQRILVFNQN 712
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
SF +EG E+GQ+ P G+ VD G++ V D NNR+Q+F PDG FG G G+GEF
Sbjct: 539 SFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFD 598
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ V + I+V D++NHR+Q+F
Sbjct: 599 LPAGICVDVDNRIIVVDKDNHRVQIF 624
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRG 102
K GS G E G F +P +AV IVV DS NHR+Q FD + + F P G
Sbjct: 632 LKFGSYGKEYGQFQYPWDVAVNSRRQIVVTDSRNHRIQ----QFDSEGRFIRQIFNRPSG 687
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFV 131
+ + I+VADS N R+ VF + F+
Sbjct: 688 LCCDEEGRIIVADSKNQRILVFNQNLDFM 716
>gi|440717430|ref|ZP_20897920.1| NHL repeat containing protein [Rhodopirellula baltica SWK14]
gi|436437616|gb|ELP31242.1| NHL repeat containing protein [Rhodopirellula baltica SWK14]
Length = 332
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 157/336 (46%), Gaps = 36/336 (10%)
Query: 4 PSEAKNINSCFLLQTLLVSGIGQVGTTPRSQYLQKR---RLQFKIGSRGSEPGCFTWPRG 60
P+E+K ++ Q L+ +G T + + + G RG G F PR
Sbjct: 9 PAESKPVDRRQACQRLMAGATSLMGLTTLNGCVASAFGGTPELVWGRRGFSDGRFLKPRA 68
Query: 61 IAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW---------PRGIAV-GPDNS 110
+A+ PD+ + + D++ R+QV FD + TW P G+ G N
Sbjct: 69 MAIDPDDQLYIVDTTG-RIQV----FDADGQHLR---TWTTPETNNGRPTGMVFDGAKNR 120
Query: 111 IVVADSSNHRVQVFQSDGTFVGKF---GSMGNKAGQLEHPHYIAVSNTNRVIVSD-SNNH 166
++VAD+ +R+ F G + + G+ GN AG+ IAV + + + +
Sbjct: 121 LLVADTHYYRMLAFTPTGELLPEDQIGGTSGNGAGEFAFVTDIAVDGDGCLYIGEYGASD 180
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
R+Q FD NG TF+ ++G G + P + + + ++D+ NHRVQ +D
Sbjct: 181 RIQRFDPNG-------TFMAQWGGTGREVQHFVRPQSLVIHEKT-LWIADACNHRVQRYD 232
Query: 227 VNG---RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
++ R I S+G EG + G +P G+AVD G + V + GN R+Q TPDG+ + ++G
Sbjct: 233 ISTTEPRWIGSWGQEGKQLGDFYYPYGIAVDPDGTVLVCEFGNQRVQRLTPDGEPISSWG 292
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ G+ V S + V D NHR+Q F
Sbjct: 293 APGHDPGQLYEPWGLVVDSRRRVHVLDSNNHRVQRF 328
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 24 IGQVGTTPRSQYLQKR-RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
IG+ G + R Q + G G E F P+ + + + ++ +AD+ NHRVQ
Sbjct: 173 IGEYGASDRIQRFDPNGTFMAQWGGTGREVQHFVRPQSLVIH-EKTLWIADACNHRVQ-- 229
Query: 83 FPHFDLKTNCVFLAFTW------------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTF 130
+D+ T +W P GIAV PD +++V + N RVQ DG
Sbjct: 230 --RYDISTTEPRWIGSWGQEGKQLGDFYYPYGIAVDPDGTVLVCEFGNQRVQRLTPDGEP 287
Query: 131 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 175
+ +G+ G+ GQL P + V + RV V DSNNHRVQ F + G
Sbjct: 288 ISSWGAPGHDPGQLYEPWGLVVDSRRRVHVLDSNNHRVQRFTLPG 332
>gi|443703657|gb|ELU01092.1| hypothetical protein CAPTEDRAFT_94389, partial [Capitella teleta]
Length = 308
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 128/244 (52%), Gaps = 22/244 (9%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+L FK+ G PG T P G+A PD ++VVA+ N R+Q+ FD + + W
Sbjct: 33 KLLFKLDQVGGWPGKVTAPTGVAFLPDGNLVVAECEN-RLQL----FDQAGQSIRI-IGW 86
Query: 100 ----PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P + V + I + D + V+++Q DGT + +G+ GQL P IA+ +
Sbjct: 87 GKIRPCSVVVSREGHISITDKKDCCVKIYQVDGTCLASWGT-----GQLSSPSGIAIMSN 141
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+ IV+D N H V I ++G + +FG G Q +P +I V + ++VS
Sbjct: 142 SHYIVTDVNRHSVSIH-------SAEGNLLSQFGQWGCDDYQFNNPSHITVDQHDNILVS 194
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D+ N V+I+D G + S+ GQL+ P+G++VD++G+I V D N+RI + T D
Sbjct: 195 DAGNSCVKIYDKAGLFVRKISLGNSKHGQLRKPQGISVDNRGHIFVSDRDNHRISMLTYD 254
Query: 276 GQFL 279
G+F+
Sbjct: 255 GRFV 258
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 112/222 (50%), Gaps = 19/222 (8%)
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
T P G+A PD ++VVA+ N R+Q+F G + G G++ P + VS
Sbjct: 49 TAPTGVAFLPDGNLVVAECEN-RLQLFDQAGQSIRIIG-----WGKIR-PCSVVVSREGH 101
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
+ ++D + V+I+ V+G S GT GQL P IA+ + + IV+D
Sbjct: 102 ISITDKKDCCVKIYQVDGTCLASWGT------------GQLSSPSGIAIMSNSHYIVTDV 149
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
N H V I G +++ FG G ++ Q P + VD I V D+GN+ ++I+ G
Sbjct: 150 NRHSVSIHSAEGNLLSQFGQWGCDDYQFNNPSHITVDQHDNILVSDAGNSCVKIYDKAGL 209
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F+R S G+ + +G++V + G+I V DR+NHRI +
Sbjct: 210 FVRKISLGNSKHGQLRKPQGISVDNRGHIFVSDRDNHRISML 251
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 16/187 (8%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN-----CVFLAFTWPRGIAVGP 107
G + P GIA+ ++ +V D + H V + +L + C F P I V
Sbjct: 128 GQLSSPSGIAIMSNSHYIVTDVNRHSVSIHSAEGNLLSQFGQWGCDDYQFNNPSHITVDQ 187
Query: 108 DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 167
++I+V+D+ N V+++ G FV K +K GQL P I+V N + VSD +NHR
Sbjct: 188 HDNILVSDAGNSCVKIYDKAGLFVRKISLGNSKHGQLRKPQGISVDNRGHIFVSDRDNHR 247
Query: 168 VQIFDVNGR-----VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
+ + +GR + ++DG ++ A L A++ T+ ++ +H V
Sbjct: 248 ISMLTYDGRFVCHLLTKNDGIRFPSDIAVDVSANHL------AIAETHTGFLTKDPHHAV 301
Query: 223 QIFDVNG 229
+++ +NG
Sbjct: 302 KLYHLNG 308
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 19/187 (10%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
K +G G++ P +A ++V++ N R+Q+FD G+ + G GK
Sbjct: 37 KLDQVGGWPGKVTAPTGVAFLPDGNLVVAECEN-RLQLFDQAGQSIRIIGW--GKI---- 89
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
P + VS + ++D + V+I+ V+G + S+G+ GQL P G+A
Sbjct: 90 -------RPCSVVVSREGHISITDKKDCCVKIYQVDGTCLASWGT-----GQLSSPSGIA 137
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRE 312
+ + V D + + I + +G L FG WG D +F + V + NILV D
Sbjct: 138 IMSNSHYIVTDVNRHSVSIHSAEGNLLSQFGQWGCDDYQFNNPSHITVDQHDNILVSDAG 197
Query: 313 NHRIQVF 319
N ++++
Sbjct: 198 NSCVKIY 204
>gi|340720423|ref|XP_003398638.1| PREDICTED: brain tumor protein-like [Bombus terrestris]
Length = 799
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 121/220 (55%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV N I+VAD++NHR+Q+F +G F +FG G GQL +P+ +AV T+
Sbjct: 542 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKHDGQLLYPNRVAVVKTS 601
Query: 157 -RVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV++ S H++QI++ G+ FV KFG A L+HP + V + R++V
Sbjct: 602 GDIIVTERSPTHQIQIYNQYGQ-------FVRKFG-----ANILQHPRGVTVDSKGRIVV 649
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD G V FG L+FP GV V+D+ I + D+ + +++F
Sbjct: 650 VECKVMRVIIFDQTGNVHQKFGC----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 705
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+G +LR G G+G GV + + G IL+ D N+
Sbjct: 706 EGSYLRQIG----GEGITNYPIGVGINAVGEILIADNHNN 741
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 148/304 (48%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 517 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKE 572
Query: 90 TNCVFL---------AFTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G FV KFG
Sbjct: 573 GRFKFQFGECGKHDGQLLYPNRVAVVKTSGDIIVTERSPTHQIQIYNQYGQFVRKFG--- 629
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V + R++V + RV IFD G V Q KFG + L
Sbjct: 630 --ANILQHPRGVTVDSKGRIVVVECKVMRVIIFDQTGNVHQ-------KFGC----SKHL 676
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F+ G + G EG +P GV ++ G
Sbjct: 677 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGSYLRQIGGEGIT----NYPIGVGINAVGE 732
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
I + D+ NN + IFT DGQ + A + + K + VA+M +G++++ ++ +R
Sbjct: 733 ILIADNHNNFNLTIFTQDGQLVSAL------ESKVKHAQCFDVALMDDGSVVLASKD-YR 785
Query: 316 IQVF 319
+ ++
Sbjct: 786 LYIY 789
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
IF ++ + + KFG G GQ P +AV+ N +IV+D+NNHR+QIFD G
Sbjct: 514 IFPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG 573
Query: 230 RVITSFGSEGSEEGQLKFPRGVA-VDDQGYISVGD-SGNNRIQIFTPDGQFLRAFGCWGS 287
R FG G +GQL +P VA V G I V + S ++IQI+ GQF+R FG
Sbjct: 574 RFKFQFGECGKHDGQLLYPNRVAVVKTSGDIIVTERSPTHQIQIYNQYGQFVRKFGA--- 630
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ GV V S G I+V + + R+ +F
Sbjct: 631 --NILQHPRGVTVDSKGRIVVVECKVMRVIIF 660
>gi|260785762|ref|XP_002587929.1| hypothetical protein BRAFLDRAFT_87317 [Branchiostoma floridae]
gi|229273084|gb|EEN43940.1| hypothetical protein BRAFLDRAFT_87317 [Branchiostoma floridae]
Length = 809
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 137/284 (48%), Gaps = 33/284 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ------VCFPHFDLKTNCVFLAFTW 99
G GSEPG F PRG+ V P N I V D N RVQ V HF
Sbjct: 546 GGEGSEPGKFRLPRGVVVSPSNEIFVTDELNRRVQVHSTEGVYLRHFPAVVPGTEDKDME 605
Query: 100 PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 155
P + + + ++ V ++++H VQ + DGT + F N + IA T
Sbjct: 606 PSDVCMDGNGTLWVVGSGETADHVVQ-YSRDGTAMAGFELKKNN-----YSRGIAFDMRT 659
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
NR++++D++ V VF+ DG+ V ++ + G++ P Y+ V +V+
Sbjct: 660 NRILITDADQGEVL-------VFRPDGSLVR---TVRHPRGEMLRPWYVTVDGEGNFLVT 709
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D NH V ++D +G+ + FG EGS EGQL P G+ D G+I V DS N R+Q+FT
Sbjct: 710 DLINHSVYVYDESGKFLFQFGGEGSGEGQLTHPHGICTDSSGHIIVADSENYRVQMFTRH 769
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F+R G F EG+AV G ++V D + + VF
Sbjct: 770 GEFVRTVRT-----GFFP--EGLAVGPEGQLVVTDWYYYTVTVF 806
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 52/230 (22%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI----------------------- 170
FG G++ G+ P + VS +N + V+D N RVQ+
Sbjct: 545 FGGEGSEPGKFRLPRGVVVSPSNEIFVTDELNRRVQVHSTEGVYLRHFPAVVPGTEDKDM 604
Query: 171 ------FDVNGRV--------------FQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 209
D NG + + DGT + F N + IA T
Sbjct: 605 EPSDVCMDGNGTLWVVGSGETADHVVQYSRDGTAMAGFELKKNN-----YSRGIAFDMRT 659
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
NR++++D++ V +F +G ++ + G++ P V VD +G V D N+ +
Sbjct: 660 NRILITDADQGEVLVFRPDGSLVRTV---RHPRGEMLRPWYVTVDGEGNFLVTDLINHSV 716
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++ G+FL FG GSG+G+ G+ S+G+I+V D EN+R+Q+F
Sbjct: 717 YVYDESGKFLFQFGGEGSGEGQLTHPHGICTDSSGHIIVADSENYRVQMF 766
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G GS G T P GI I+VADS N+RVQ+ H + V
Sbjct: 719 YDESGKFLFQFGGEGSGEGQLTHPHGICTDSSGHIIVADSENYRVQMFTRHGEF-VRTVR 777
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
F +P G+AVGP+ +VV D + V VF
Sbjct: 778 TGF-FPEGLAVGPEGQLVVTDWYYYTVTVF 806
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
D RVIT FG EGSE G+ + PRGV V I V D N R+Q+ + +G +LR F
Sbjct: 537 DKTQRVIT-FGGEGSEPGKFRLPRGVVVSPSNEIFVTDELNRRVQVHSTEGVYLRHFPAV 595
Query: 286 GSGDGEFKGLEGVAVMSNGN 305
G E K +E V +GN
Sbjct: 596 VPGT-EDKDMEPSDVCMDGN 614
>gi|358341886|dbj|GAA31034.2| tripartite motif-containing protein 2 [Clonorchis sinensis]
Length = 710
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 134/289 (46%), Gaps = 33/289 (11%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------- 95
F IG++G G F P G+ V +N ++VADS+N +QV T FL
Sbjct: 409 FSIGTKGRGEGEFANPTGVCVTRENKVIVADSNNATIQV------FTTQAQFLFRIGEYG 462
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P +A + + +V+D H V V+ GT++ +FG L P I
Sbjct: 463 YHPGQLMRPMDVAETINGNYLVSDFELHCVTVYSPTGTYISRFGQR-----YLSGPKGII 517
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
R++V D + + IF G+ F+ +FG+ G+ Q +P +AV++ +
Sbjct: 518 ADRNGRILVVDQKSCMLCIFKPTGK-------FINRFGARGSGDNQFTNPFSVAVNSQDE 570
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
+ VSD H +++FD NG + FG G E G L P G+A D Q + V D GNNR+Q+
Sbjct: 571 IYVSDYAQHAIKVFDQNGLYLFRFGEHGIEPGMLHAPTGLAFDKQDNLFVSDWGNNRVQV 630
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMS-NGNILVCDRENHRIQVF 319
F G F R S F G +G+ + + V D N+ ++VF
Sbjct: 631 FDALGNFQRVI---SSAFEPFNGPQGLTFHTPTQRLFVTDPGNYCVKVF 676
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 93/192 (48%), Gaps = 12/192 (6%)
Query: 128 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK 187
G ++ G+ G G+ +P + V+ N+VIV+DSNN +Q VF + F+ +
Sbjct: 405 GDYLFSIGTKGRGEGEFANPTGVCVTRENKVIVADSNNATIQ-------VFTTQAQFLFR 457
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
G G GQL P +A + +VSD H V ++ G I+ FG + L
Sbjct: 458 IGEYGYHPGQLMRPMDVAETINGNYLVSDFELHCVTVYSPTGTYISRFG-----QRYLSG 512
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P+G+ D G I V D + + IF P G+F+ FG GSGD +F VAV S I
Sbjct: 513 PKGIIADRNGRILVVDQKSCMLCIFKPTGKFINRFGARGSGDNQFTNPFSVAVNSQDEIY 572
Query: 308 VCDRENHRIQVF 319
V D H I+VF
Sbjct: 573 VSDYAQHAIKVF 584
>gi|147920395|ref|YP_685830.1| hypothetical protein RCIX1195 [Methanocella arvoryzae MRE50]
gi|110621226|emb|CAJ36504.1| hypothetical protein RCIX1195 [Methanocella arvoryzae MRE50]
Length = 673
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 139/295 (47%), Gaps = 29/295 (9%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
+GSRG+ F P + VG D I VAD N+RVQV + D + +
Sbjct: 114 TLGSRGNGNYQFNGPFDVEVGVDGKIYVADHGNNRVQV---YSDTGAYLLTVGSGPGSGD 170
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS--MGNKAGQLEHPHYIAV 152
F P +AV SI VAD N++V++F GT++ G+ +G + P + V
Sbjct: 171 SQFDRPMSVAVDSAGSIYVADYMNNKVKIFDGAGTYLRSIGTGTLGTGDYEFRRPKGVTV 230
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH---PHYIAVSNT 209
+ V V D N+R+Q+FD S GT++ G+ G H P V
Sbjct: 231 DGSGNVYVVDGYNNRIQVFD-------SAGTYLRTIGASGFGPSGTTHFFVPKDCKVGAD 283
Query: 210 NRVIVSDSNNHRVQIFDVNG---RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
V V+D V +F G R I + G+ GS Q P VAVD G I V D GN
Sbjct: 284 GTVYVADEGGMCVHVFSNTGAWIRTIGTPGTSGSGNYQFNCPCDVAVDGGGNIYVADPGN 343
Query: 267 NRIQIFTPDGQFLRAFGC--WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++++I+ G +LR+ G G+GD +F V + S GNI V DR N+RI++F
Sbjct: 344 DKVKIYDNTGTYLRSIGTGIGGAGDDQFDDPMSVDLDSEGNIYVADRNNNRIRIF 398
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS-EGSEEGQ 244
G GS GN Q P + V ++ V+D N+RVQ++ G + + GS GS + Q
Sbjct: 113 GTLGSRGNGNYQFNGPFDVEVGVDGKIYVADHGNNRVQVYSDTGAYLLTVGSGPGSGDSQ 172
Query: 245 LKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF--GCWGSGDGEFKGLEGVAVMS 302
P VAVD G I V D NN+++IF G +LR+ G G+GD EF+ +GV V
Sbjct: 173 FDRPMSVAVDSAGSIYVADYMNNKVKIFDGAGTYLRSIGTGTLGTGDYEFRRPKGVTVDG 232
Query: 303 NGNILVCDRENHRIQVF 319
+GN+ V D N+RIQVF
Sbjct: 233 SGNVYVVDGYNNRIQVF 249
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 132 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM 191
G GS GN Q P + V ++ V+D N+RVQ++ G + G+ G S
Sbjct: 113 GTLGSRGNGNYQFNGPFDVEVGVDGKIYVADHGNNRVQVYSDTGAYLLTVGSGPGSGDS- 171
Query: 192 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF--PR 249
Q + P +AV + + V+D N++V+IFD G + S G+ G +F P+
Sbjct: 172 -----QFDRPMSVAVDSAGSIYVADYMNNKVKIFDGAGTYLRSIGTGTLGTGDYEFRRPK 226
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG---SGDGEFKGLEGVAVMSNGNI 306
GV VD G + V D NNRIQ+F G +LR G G SG F + V ++G +
Sbjct: 227 GVTVDGSGNVYVVDGYNNRIQVFDSAGTYLRTIGASGFGPSGTTHFFVPKDCKVGADGTV 286
Query: 307 LVCDRENHRIQVF 319
V D + VF
Sbjct: 287 YVADEGGMCVHVF 299
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD-----LKTNCV------- 93
G+ G+ F P+G+ V ++ V D N+R+QV FD L+T
Sbjct: 213 GTLGTGDYEFRRPKGVTVDGSGNVYVVDGYNNRIQV----FDSAGTYLRTIGASGFGPSG 268
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV---GKFGSMGNKAGQLEHPHYI 150
F P+ VG D ++ VAD V VF + G ++ G G+ G+ Q P +
Sbjct: 269 TTHFFVPKDCKVGADGTVYVADEGGMCVHVFSNTGAWIRTIGTPGTSGSGNYQFNCPCDV 328
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
AV + V+D N +V+I+D G +S GT +G G Q + P + + +
Sbjct: 329 AVDGGGNIYVADPGNDKVKIYDNTGTYLRSIGTGIGGAGD-----DQFDDPMSVDLDSEG 383
Query: 211 RVIVSDSNNHRVQIFDVNGRVIT 233
+ V+D NN+R++IF + +T
Sbjct: 384 NIYVADRNNNRIRIFYQSATAVT 406
>gi|291222861|ref|XP_002731433.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 693
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 119/230 (51%), Gaps = 16/230 (6%)
Query: 49 GSEPGCFTWPRGIAV--GPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVG 106
GS F +P + + D + + DS N +V VC +F+L T+P GI++
Sbjct: 472 GSGSSQFNYPESVLITKSQDGNYFITDSDNKQVVVCNNNFELIRCFGSEELTYPVGISIS 531
Query: 107 PDNS-IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
P N + V D +H +++++ DG ++ FGS G + Q ++P I N VIV+D NN
Sbjct: 532 PVNERVYVVDQYSHCIRIYKQDGRYINSFGSEGGEDCQFKYPWGITTDNKGNVIVADQNN 591
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
HR+Q V +G F+ KFGS GN GQL++P +A V VSD N+RVQ +
Sbjct: 592 HRIQ-------VMTGEGEFLFKFGSCGNSDGQLQYPGSVATDTDGYVYVSDCVNNRVQKY 644
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ---GYISVGDSGNNRIQIF 272
D +G+ + S G L+ P G+ V + G + V D N+ I++F
Sbjct: 645 DSHGQFVCRIDSPGD---GLRNPYGICVTNDKPFGKVVVADYSNHSIKVF 691
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 97 FTWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F +P + + D + + DS N +V V ++ + FGS +L +P I++S
Sbjct: 478 FNYPESVLITKSQDGNYFITDSDNKQVVVCNNNFELIRCFGS-----EELTYPVGISISP 532
Query: 155 TN-RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
N RV V D +H + R+++ DG ++ FGS G + Q ++P I N VI
Sbjct: 533 VNERVYVVDQYSHCI-------RIYKQDGRYINSFGSEGGEDCQFKYPWGITTDNKGNVI 585
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
V+D NNHR+Q+ G + FGS G+ +GQL++P VA D GY+ V D NNR+Q +
Sbjct: 586 VADQNNHRIQVMTGEGEFLFKFGSCGNSDGQLQYPGSVATDTDGYVYVSDCVNNRVQKYD 645
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSN---GNILVCDRENHRIQVF 319
GQF+ G G + G+ V ++ G ++V D NH I+VF
Sbjct: 646 SHGQFVCRIDSPGDG---LRNPYGICVTNDKPFGKVVVADYSNHSIKVF 691
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 49/184 (26%)
Query: 185 VGKFGSMGNKAG----QLEHPHYIAVSNTN--RVIVSDSNNHRVQIFDVNGRVIT----- 233
+ K G MGN +G Q +P + ++ + ++DS+N +V + + N +I
Sbjct: 461 IPKKGLMGNYSGSGSSQFNYPESVLITKSQDGNYFITDSDNKQVVVCNNNFELIRCFGSE 520
Query: 234 --------------------------------------SFGSEGSEEGQLKFPRGVAVDD 255
SFGSEG E+ Q K+P G+ D+
Sbjct: 521 ELTYPVGISISPVNERVYVVDQYSHCIRIYKQDGRYINSFGSEGGEDCQFKYPWGITTDN 580
Query: 256 QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHR 315
+G + V D N+RIQ+ T +G+FL FG G+ DG+ + VA ++G + V D N+R
Sbjct: 581 KGNVIVADQNNHRIQVMTGEGEFLFKFGSCGNSDGQLQYPGSVATDTDGYVYVSDCVNNR 640
Query: 316 IQVF 319
+Q +
Sbjct: 641 VQKY 644
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 23/151 (15%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y Q R GS G E F +P GI +++VAD +NHR+QV + F
Sbjct: 550 YKQDGRYINSFGSEGGEDCQFKYPWGITTDNKGNVIVADQNNHRIQV------MTGEGEF 603
Query: 95 L-----------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
L +P +A D + V+D N+RVQ + S G FV + S G+
Sbjct: 604 LFKFGSCGNSDGQLQYPGSVATDTDGYVYVSDCVNNRVQKYDSHGQFVCRIDSPGDG--- 660
Query: 144 LEHPHYIAVSNTN---RVIVSDSNNHRVQIF 171
L +P+ I V+N +V+V+D +NH +++F
Sbjct: 661 LRNPYGICVTNDKPFGKVVVADYSNHSIKVF 691
>gi|260785712|ref|XP_002587904.1| hypothetical protein BRAFLDRAFT_87292 [Branchiostoma floridae]
gi|229273059|gb|EEN43915.1| hypothetical protein BRAFLDRAFT_87292 [Branchiostoma floridae]
Length = 792
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 143/286 (50%), Gaps = 36/286 (12%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTW 99
G G+EPG F PRG+ V P N I VA+ N RVQV HF
Sbjct: 528 GGMGTEPGKFYHPRGVVVSPSNEIYVAERDNRRVQVHSTEGVYLRHFPTVVTGTGDKDMR 587
Query: 100 PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY--IAVS- 153
P + + + ++ V ++++H VQ + +DGT + +F + N + +Y IAV
Sbjct: 588 PHDVCMDGNGTLWVVGRGETADHVVQ-YSTDGTTMTRF-DIKNSS------YYRGIAVDM 639
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
TN ++VSD + V+ VF+ DG+ V + G++ P Y+ V ++
Sbjct: 640 RTNHILVSDPDQCAVE-------VFRPDGSLVRSVRH--PRDGEMTRPRYVTVDGEGNIL 690
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
V+D +H V ++D +G+ + FG GS EGQL PRG+ D G+I V D+GN R+QIFT
Sbjct: 691 VTDLISHYVYVYDNSGKFLFQFGGYGSGEGQLNEPRGICTDSSGHIIVVDTGNERVQIFT 750
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F+R F+ EG+AV G ++V + N + VF
Sbjct: 751 RHGEFVRTVNTG------FEP-EGLAVGPGGQLVVTNWNNETVTVF 789
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 55/232 (23%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI----------------------- 170
FG MG + G+ HP + VS +N + V++ +N RVQ+
Sbjct: 527 FGGMGTEPGKFYHPRGVVVSPSNEIYVAERDNRRVQVHSTEGVYLRHFPTVVTGTGDKDM 586
Query: 171 ------FDVNGRV--------------FQSDGTFVGKFGSMGNKAGQLEHPHY--IAVS- 207
D NG + + +DGT + +F + N + +Y IAV
Sbjct: 587 RPHDVCMDGNGTLWVVGRGETADHVVQYSTDGTTMTRF-DIKNSS------YYRGIAVDM 639
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
TN ++VSD + V++F +G ++ S +G++ PR V VD +G I V D ++
Sbjct: 640 RTNHILVSDPDQCAVEVFRPDGSLVRSV--RHPRDGEMTRPRYVTVDGEGNILVTDLISH 697
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ ++ G+FL FG +GSG+G+ G+ S+G+I+V D N R+Q+F
Sbjct: 698 YVYVYDNSGKFLFQFGGYGSGEGQLNEPRGICTDSSGHIIVVDTGNERVQIF 749
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGC--WGS 287
+V+ +FG G+E G+ PRGV V I V + N R+Q+ + +G +LR F G+
Sbjct: 522 QVVITFGGMGTEPGKFYHPRGVVVSPSNEIYVAERDNRRVQVHSTEGVYLRHFPTVVTGT 581
Query: 288 GDGEFKGLEGVAVMSNGNILVCDR 311
GD + + V + NG + V R
Sbjct: 582 GDKDMRP-HDVCMDGNGTLWVVGR 604
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRG 102
F+ G GS G PRGI I+V D+ N RVQ+ H + V F P G
Sbjct: 710 FQFGGYGSGEGQLNEPRGICTDSSGHIIVVDTGNERVQIFTRHGEF-VRTVNTGFE-PEG 767
Query: 103 IAVGPDNSIVVADSSNHRVQVF 124
+AVGP +VV + +N V VF
Sbjct: 768 LAVGPGGQLVVTNWNNETVTVF 789
>gi|260785686|ref|XP_002587891.1| hypothetical protein BRAFLDRAFT_87279 [Branchiostoma floridae]
gi|229273046|gb|EEN43902.1| hypothetical protein BRAFLDRAFT_87279 [Branchiostoma floridae]
Length = 946
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 125/268 (46%), Gaps = 62/268 (23%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS--- 153
F PRG+ + P N I VAD +N RVQV ++G ++ F ++ G+ PH I +
Sbjct: 693 FRLPRGVVLSPSNEIFVADYNNRRVQVHSTEGVYLHHFPTVVPGTGKDMQPHDICMDGNG 752
Query: 154 ------------------------------------------NTNRVIVSDSNNHRVQIF 171
TN ++V+D++ VQ
Sbjct: 753 TLWVVRRGETAHHVVQYSTDGTVMAGFDLEKIGYFRGIAVDMRTNDILVTDADQGAVQ-- 810
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
VF+ DG+ V ++ + G++ P Y+ V + VS NN+ V ++D +G+
Sbjct: 811 -----VFRPDGSLVR---TVRHPRGEMLRPWYVTVDGEGNIFVSAWNNNYVYVYDESGKF 862
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ FG EGS EGQLK PRG+ D G+I V DSGN +IQIFT G+F+R GS G
Sbjct: 863 LFQFGGEGSGEGQLKGPRGICTDSLGHILVADSGNEKIQIFTRHGKFVRTVRT-GSKPG- 920
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+AV G ++V D NH + VF
Sbjct: 921 -----GLAVGPEGQLVVTDLWNHTVTVF 943
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 55/231 (23%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G++ G+ P + +S +N + V+D NN RVQ V ++G ++ F ++
Sbjct: 683 FGGEGSEPGKFRLPRGVVLSPSNEIFVADYNNRRVQ-------VHSTEGVYLHHFPTVVP 735
Query: 194 KAGQLEHPHYIAVS---------------------------------------------N 208
G+ PH I +
Sbjct: 736 GTGKDMQPHDICMDGNGTLWVVRRGETAHHVVQYSTDGTVMAGFDLEKIGYFRGIAVDMR 795
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
TN ++V+D++ VQ+F +G ++ + G++ P V VD +G I V NN
Sbjct: 796 TNDILVTDADQGAVQVFRPDGSLVRTV---RHPRGEMLRPWYVTVDGEGNIFVSAWNNNY 852
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ ++ G+FL FG GSG+G+ KG G+ S G+ILV D N +IQ+F
Sbjct: 853 VYVYDESGKFLFQFGGEGSGEGQLKGPRGICTDSLGHILVADSGNEKIQIF 903
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G GS G PRGI I+VADS N ++Q+ H K
Sbjct: 856 YDESGKFLFQFGGEGSGEGQLKGPRGICTDSLGHILVADSGNEKIQIFTRHG--KFVRTV 913
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
+ P G+AVGP+ +VV D NH V VF
Sbjct: 914 RTGSKPGGLAVGPEGQLVVTDLWNHTVTVF 943
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ +FG EGSE G+ + PRGV + I V D N R+Q+ + +G +L F G G+
Sbjct: 680 VITFGGEGSEPGKFRLPRGVVLSPSNEIFVADYNNRRVQVHSTEGVYLHHFPTVVPGTGK 739
Query: 292 FKGLEGVAVMSNGNILVCDR 311
+ + NG + V R
Sbjct: 740 DMQPHDICMDGNGTLWVVRR 759
>gi|156740315|ref|YP_001430444.1| NHL repeat-containing protein [Roseiflexus castenholzii DSM 13941]
gi|156231643|gb|ABU56426.1| NHL repeat containing protein [Roseiflexus castenholzii DSM 13941]
Length = 1163
Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats.
Identities = 75/206 (36%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G++ GQL P +AV VIVSDS NHR+ +FD GT + G GN
Sbjct: 851 FGEFGSEPGQLIQPRGVAVDPQGNVIVSDSGNHRLIVFD-------PSGTPIRTIGGFGN 903
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG--------------SEG 239
GQ P +AV + V+D+ N R+ D GR ++S+G + G
Sbjct: 904 GDGQFYEPRGVAVDAAGNMYVADTWNARIVKLDPQGRFLSSWGVGREDFGDGRRASPTGG 963
Query: 240 SEEGQLKFP------RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
S+E L P RGVAVD +G + + D+GN RI + DG + +G GS G+F
Sbjct: 964 SQEQNLARPLDFFGPRGVAVDAEGNVYIADTGNKRIVVTDSDGNYQYQWGYDGSAAGQFN 1023
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
GVAV NG + V D N R+Q F
Sbjct: 1024 EPIGVAVDENGTVFVADTWNSRVQAF 1049
Score = 112 bits (281), Expect = 2e-22, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 93/187 (49%), Gaps = 15/187 (8%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PRG+AV P +++V+DS NHR+ VF GT + G GN GQ P +AV +
Sbjct: 864 PRGVAVDPQGNVIVSDSGNHRLIVFDPSGTPIRTIGGFGNGDGQFYEPRGVAVDAAGNMY 923
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA----GQLEH----------PHYIA 205
V+D+ N R+ D GR S G FG G +A G E P +A
Sbjct: 924 VADTWNARIVKLDPQGRFLSSWGVGREDFGD-GRRASPTGGSQEQNLARPLDFFGPRGVA 982
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG 265
V V ++D+ N R+ + D +G +G +GS GQ P GVAVD+ G + V D+
Sbjct: 983 VDAEGNVYIADTGNKRIVVTDSDGNYQYQWGYDGSAAGQFNEPIGVAVDENGTVFVADTW 1042
Query: 266 NNRIQIF 272
N+R+Q F
Sbjct: 1043 NSRVQAF 1049
Score = 96.7 bits (239), Expect = 1e-17, Method: Composition-based stats.
Identities = 90/305 (29%), Positives = 136/305 (44%), Gaps = 40/305 (13%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH-FDLKTNCVF----LAFTWP 100
G GSEPG PRG+AV P +++V+DS NHR+ V P ++T F F P
Sbjct: 852 GEFGSEPGQLIQPRGVAVDPQGNVIVSDSGNHRLIVFDPSGTPIRTIGGFGNGDGQFYEP 911
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG------SMGNKA----GQLEH---- 146
RG+AV ++ VAD+ N R+ G F+ +G G +A G E
Sbjct: 912 RGVAVDAAGNMYVADTWNARIVKLDPQGRFLSSWGVGREDFGDGRRASPTGGSQEQNLAR 971
Query: 147 ------PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
P +AV V ++D+ N R+ + D SDG + ++G G+ AGQ
Sbjct: 972 PLDFFGPRGVAVDAEGNVYIADTGNKRIVVTD-------SDGNYQYQWGYDGSAAGQFNE 1024
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIF--DVNGRV----ITSFGSEGSEEGQLKFPRGVAVD 254
P +AV V V+D+ N RVQ F +GRV ++ G + + P A
Sbjct: 1025 PIGVAVDENGTVFVADTWNSRVQAFARGEDGRVDPLPYATWRVPGWQPQTYEDPFIAARG 1084
Query: 255 DQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+ +SV N + + +G L +G G+ GVA +G+++V DR N
Sbjct: 1085 GRVIVSV--PVRNLLTLTDDNGVGLLTWGGSGNDAASVNLPCGVAFAPDGSVVVVDRGNV 1142
Query: 315 RIQVF 319
R+ F
Sbjct: 1143 RMMRF 1147
Score = 41.6 bits (96), Expect = 0.53, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 15/142 (10%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW-- 99
Q++ G GS G F P G+AV + ++ VAD+ N RVQ D + + + A TW
Sbjct: 1009 QYQWGYDGSAAGQFNEPIGVAVDENGTVFVADTWNSRVQAFARGEDGRVDPLPYA-TWRV 1067
Query: 100 ----------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
P A G ++V+ + + + +G + +G GN A + P
Sbjct: 1068 PGWQPQTYEDPFIAARG--GRVIVSVPVRNLLTLTDDNGVGLLTWGGSGNDAASVNLPCG 1125
Query: 150 IAVSNTNRVIVSDSNNHRVQIF 171
+A + V+V D N R+ F
Sbjct: 1126 VAFAPDGSVVVVDRGNVRMMRF 1147
>gi|17554338|ref|NP_498684.1| Protein NCL-1 [Caenorhabditis elegans]
gi|466080|sp|P34611.1|NCL1_CAEEL RecName: Full=B-box type zinc finger protein ncl-1
gi|2906148|gb|AAC14263.1| B box zinc finger protein Ncl-1 [Caenorhabditis elegans]
gi|351020795|emb|CCD62763.1| Protein NCL-1 [Caenorhabditis elegans]
Length = 851
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 122/220 (55%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT- 155
FT P G+AV IVVAD++NHR+QVF +G F +FG G + GQL +P+ +AV+ T
Sbjct: 586 FTEPSGVAVNGQGDIVVADTNNHRIQVFDKEGRFKFQFGECGKRDGQLLYPNRVAVNRTT 645
Query: 156 -NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ V+ S H++Q+++ G+ F+ KFG A L+HP + V + R+IV
Sbjct: 646 GDFVVTERSPTHQIQVYNQYGQ-------FLRKFG-----ANILQHPRGVCVDSKGRIIV 693
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD+ G ++ F S L+FP GV +D+ I + D+ + I++F+
Sbjct: 694 VECKVMRVIIFDMFGNILQKF----SCSRYLEFPNGVCTNDKNEILISDNRAHCIKVFSY 749
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+GQ+LR G G+G GV + S G ++V D N+
Sbjct: 750 EGQYLRQIG----GEGVTNYPIGVGINSLGEVVVADNHNN 785
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 41/295 (13%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL- 95
QK K G G G FT P G+AV IVVAD++NHR+QV FD + F
Sbjct: 568 QKMIYHCKFGEFGVMEGQFTEPSGVAVNGQGDIVVADTNNHRIQV----FDKEGRFKFQF 623
Query: 96 --------AFTWPRGIAVGPDNS--IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE 145
+P +AV +V S H++QV+ G F+ KFG A L+
Sbjct: 624 GECGKRDGQLLYPNRVAVNRTTGDFVVTERSPTHQIQVYNQYGQFLRKFG-----ANILQ 678
Query: 146 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
HP + V + R+IV + RV IFD+ G + Q KF + LE P+ +
Sbjct: 679 HPRGVCVDSKGRIIVVECKVMRVIIFDMFGNILQ-------KFSC----SRYLEFPNGVC 727
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG 265
++ N +++SD+ H +++F G+ + G EG +P GV ++ G + V D+
Sbjct: 728 TNDKNEILISDNRAHCIKVFSYEGQYLRQIGGEGVT----NYPIGVGINSLGEVVVADNH 783
Query: 266 NN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NN + +F+ DG + A F VA++ +G++++ ++ +R+ ++
Sbjct: 784 NNFNLTVFSQDGTMIGALESRVKHAQCFD----VALVDDGSVVLASKD-YRLYLY 833
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 18/202 (8%)
Query: 120 RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ 179
R Q+ + + KFG G GQ P +AV+ ++V+D+NNHR+Q+FD GR
Sbjct: 562 RSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNGQGDIVVADTNNHRIQVFDKEGR--- 618
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNT--NRVIVSDSNNHRVQIFDVNGRVITSFGS 237
F +FG G + GQL +P+ +AV+ T + V+ S H++Q+++ G+ + FG+
Sbjct: 619 ----FKFQFGECGKRDGQLLYPNRVAVNRTTGDFVVTERSPTHQIQVYNQYGQFLRKFGA 674
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
L+ PRGV VD +G I V + R+ IF G L+ F C S EF G
Sbjct: 675 N-----ILQHPRGVCVDSKGRIIVVECKVMRVIIFDMFGNILQKFSC--SRYLEFP--NG 725
Query: 298 VAVMSNGNILVCDRENHRIQVF 319
V IL+ D H I+VF
Sbjct: 726 VCTNDKNEILISDNRAHCIKVF 747
>gi|260785792|ref|XP_002587944.1| hypothetical protein BRAFLDRAFT_87332 [Branchiostoma floridae]
gi|229273099|gb|EEN43955.1| hypothetical protein BRAFLDRAFT_87332 [Branchiostoma floridae]
Length = 854
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 46/262 (17%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM-----------------GN 139
F +PRG+ V P N I V D N RVQV ++G ++ F ++ GN
Sbjct: 597 FYYPRGVVVSPSNEIFVTDGGNRRVQVHSTEGVYLRHFPTVLPGTEDKDMEPHDVCMDGN 656
Query: 140 -------KAGQLEHPHYIAVSNT------------NRVIVSDSNNHRVQIFDVNGR---V 177
+AG EH + T +R I + + + + D + R V
Sbjct: 657 GTLWVVGRAGTAEHVVQYSTDGTVMSGFDLKKDSYDRGIAVNMRTNHILVTDADQRAVLV 716
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS 237
F+ DG+ V +AG++ HP Y+ V ++VSD + + V ++D +G+ + FG
Sbjct: 717 FRPDGSLVRTV--RHPRAGEMTHPQYVTVDGEGNILVSDWDTNCVYVYDESGKFLFQFGG 774
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
EG EGQLK+P G+ D G+I V DSGN R+QIFT G+F+R F +G G + E
Sbjct: 775 EGRGEGQLKWPLGICTDSSGHILVADSGNERVQIFTRHGEFVRTF---RTGPGSYP--ES 829
Query: 298 VAVMSNGNILVCDRENHRIQVF 319
+ V G ++V + NH + ++
Sbjct: 830 LTVGPEGQLVVTNDRNHTVTIY 851
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G G G WP GI I+VADS N RVQ+ H +
Sbjct: 762 YDESGKFLFQFGGEGRGEGQLKWPLGICTDSSGHILVADSGNERVQIFTRHGEFVRTFRT 821
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
++P + VGP+ +VV + NH V ++
Sbjct: 822 GPGSYPESLTVGPEGQLVVTNDRNHTVTIY 851
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ +FG +G+E G+ +PRGV V I V D GN R+Q+ + +G +LR F G E
Sbjct: 584 VITFGGKGTEPGKFYYPRGVVVSPSNEIFVTDGGNRRVQVHSTEGVYLRHFPTVLPG-TE 642
Query: 292 FKGLEGVAVMSNGN 305
K +E V +GN
Sbjct: 643 DKDMEPHDVCMDGN 656
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 109/316 (34%), Gaps = 113/316 (35%)
Query: 115 DSSNHRVQVFQSD--GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH---RVQ 169
+ +N Q +D GT VG GNK G E P + SD++N R +
Sbjct: 496 ERANKATQAHLADIVGTAVGPGDVGGNKLG--EDPTVKEEDKRDAGQDSDTDNGSDGREK 553
Query: 170 IFDVNG-----RVFQSDGTFVGK----------FGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ D+ +++G G FG G + G+ +P + VS +N + V
Sbjct: 554 VIDIETPEQERHTAETEGAAAGSTGDRKQDVITFGGKGTEPGKFYYPRGVVVSPSNEIFV 613
Query: 215 SDSNNHRVQIFDVNGRVITSFGS--EGSEEGQLK-------------------------- 246
+D N RVQ+ G + F + G+E+ ++
Sbjct: 614 TDGGNRRVQVHSTEGVYLRHFPTVLPGTEDKDMEPHDVCMDGNGTLWVVGRAGTAEHVVQ 673
Query: 247 -----------------FPRGVAVDDQ-GYISVGDSGNNRIQIFTPDGQFLRA------- 281
+ RG+AV+ + +I V D+ + +F PDG +R
Sbjct: 674 YSTDGTVMSGFDLKKDSYDRGIAVNMRTNHILVTDADQRAVLVFRPDGSLVRTVRHPRAG 733
Query: 282 --------------------------------------FGCWGSGDGEFKGLEGVAVMSN 303
FG G G+G+ K G+ S+
Sbjct: 734 EMTHPQYVTVDGEGNILVSDWDTNCVYVYDESGKFLFQFGGEGRGEGQLKWPLGICTDSS 793
Query: 304 GNILVCDRENHRIQVF 319
G+ILV D N R+Q+F
Sbjct: 794 GHILVADSGNERVQIF 809
>gi|421609956|ref|ZP_16051141.1| NHL repeat containing protein [Rhodopirellula baltica SH28]
gi|408499336|gb|EKK03810.1| NHL repeat containing protein [Rhodopirellula baltica SH28]
Length = 332
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 157/336 (46%), Gaps = 36/336 (10%)
Query: 4 PSEAKNINSCFLLQTLLVSGIGQVGTTPRSQYLQKR---RLQFKIGSRGSEPGCFTWPRG 60
P+E+K ++ Q L+ +G T + + + G RG G F PR
Sbjct: 9 PAESKPVDRRQACQRLMAGATSLMGLTTLNGCVASAFGGTPELVWGRRGFSDGRFLKPRA 68
Query: 61 IAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW---------PRGIAV-GPDNS 110
+A+ PD+ + + D++ R+QV FD + TW P G+ G N
Sbjct: 69 MAIDPDDQLYIVDTTG-RIQV----FDADGQHLR---TWTTPETNNGRPTGMVFDGAKNR 120
Query: 111 IVVADSSNHRVQVFQSDGTFVGKF---GSMGNKAGQLEHPHYIAVSNTNRVIVSD-SNNH 166
++VAD+ +R+ F G + + G+ G+ AG+ IAV + + + +
Sbjct: 121 LLVADTHYYRMLAFTPTGELLPEDQIGGTSGSGAGEFAFVTDIAVDGDGCLYIGEYGASD 180
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
R+Q FD DGTF+ ++G G + P + + + ++D+ NHRVQ +D
Sbjct: 181 RIQRFD-------PDGTFMAQWGGTGREVQHFVRPQSLVIHEKT-LWIADACNHRVQRYD 232
Query: 227 VNG---RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
++ R I S+G EG + G +P G+AVD G + V + GN R+Q TPDG+ + ++G
Sbjct: 233 ISTTEPRWIGSWGQEGKQLGDFYYPYGIAVDPDGTVLVCEFGNQRVQRLTPDGEPISSWG 292
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ G+ V S + V D NHR+Q F
Sbjct: 293 APGHDPGQLYEPWGLVVDSRRRVHVLDSNNHRVQRF 328
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 24 IGQVGTTPRSQYLQKR-RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
IG+ G + R Q + G G E F P+ + + + ++ +AD+ NHRVQ
Sbjct: 173 IGEYGASDRIQRFDPDGTFMAQWGGTGREVQHFVRPQSLVIH-EKTLWIADACNHRVQ-- 229
Query: 83 FPHFDLKTNCVFLAFTW------------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTF 130
+D+ T +W P GIAV PD +++V + N RVQ DG
Sbjct: 230 --RYDISTTEPRWIGSWGQEGKQLGDFYYPYGIAVDPDGTVLVCEFGNQRVQRLTPDGEP 287
Query: 131 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 175
+ +G+ G+ GQL P + V + RV V DSNNHRVQ F + G
Sbjct: 288 ISSWGAPGHDPGQLYEPWGLVVDSRRRVHVLDSNNHRVQRFTLPG 332
>gi|260832333|ref|XP_002611112.1| hypothetical protein BRAFLDRAFT_205965 [Branchiostoma floridae]
gi|229296482|gb|EEN67122.1| hypothetical protein BRAFLDRAFT_205965 [Branchiostoma floridae]
Length = 231
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 111/223 (49%), Gaps = 13/223 (5%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 155
F +P G+A+ + +I V D+ N RVQ+F SDG F+ F + + HP IA T
Sbjct: 14 FRYPSGVAISDEGTIFVLDADNSRVQIFDSDGKFLRTFAVL--RLDMAAHPAGIAFDPRT 71
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
++VSD + H V + + G + + FGS+G Q P Y+ V+ +IVS
Sbjct: 72 WNLLVSDVSKHCVIVMNPIGALRHT-------FGSLGALDRQFNQPLYLTVNARGEIIVS 124
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D NH V++FD G + FGS G+ +GQL P GV D G I V D GN+R+ +F
Sbjct: 125 DFFNHSVKVFDSEGVFLFKFGSSGTGDGQLSLPAGVCTDASGNIIVADRGNSRVSLFDAG 184
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
G FL+ G + VAV G +++ D N + +
Sbjct: 185 GHFLKHVATKQDG---LRAPVAVAVSKKGALVITDGANSSVTI 224
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 115/238 (48%), Gaps = 22/238 (9%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD-----LKTNCVFL- 95
+ G GS G F +P G+A+ + +I V D+ N RVQ+ FD L+T V
Sbjct: 1 MIRFGREGSGEGEFRYPSGVAISDEGTIFVLDADNSRVQI----FDSDGKFLRTFAVLRL 56
Query: 96 -AFTWPRGIAVGPDN-SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
P GIA P +++V+D S H V V G FGS+G Q P Y+ V+
Sbjct: 57 DMAAHPAGIAFDPRTWNLLVSDVSKHCVIVMNPIGALRHTFGSLGALDRQFNQPLYLTVN 116
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+IVSD NH V++FD S+G F+ KFGS G GQL P + + +I
Sbjct: 117 ARGEIIVSDFFNHSVKVFD-------SEGVFLFKFGSSGTGDGQLSLPAGVCTDASGNII 169
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
V+D N RV +FD G + +++ L+ P VAV +G + + D N+ + I
Sbjct: 170 VADRGNSRVSLFDAGGHFLKHV---ATKQDGLRAPVAVAVSKKGALVITDGANSSVTI 224
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 102/188 (54%), Gaps = 10/188 (5%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
+FG G+ G+ +P +A+S+ + V D++N RVQIFD SDG F+ F +
Sbjct: 3 RFGREGSGEGEFRYPSGVAISDEGTIFVLDADNSRVQIFD-------SDGKFLRTFAVL- 54
Query: 193 NKAGQLEHPHYIAVS-NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGV 251
+ HP IA T ++VSD + H V + + G + +FGS G+ + Q P +
Sbjct: 55 -RLDMAAHPAGIAFDPRTWNLLVSDVSKHCVIVMNPIGALRHTFGSLGALDRQFNQPLYL 113
Query: 252 AVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDR 311
V+ +G I V D N+ +++F +G FL FG G+GDG+ GV ++GNI+V DR
Sbjct: 114 TVNARGEIIVSDFFNHSVKVFDSEGVFLFKFGSSGTGDGQLSLPAGVCTDASGNIIVADR 173
Query: 312 ENHRIQVF 319
N R+ +F
Sbjct: 174 GNSRVSLF 181
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 20/141 (14%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L+ GS G+ F P + V I+V+D NH V+V FD + VFL
Sbjct: 93 LRHTFGSLGALDRQFNQPLYLTVNARGEIIVSDFFNHSVKV----FD--SEGVFLFKFGS 146
Query: 96 ------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
+ P G+ +I+VAD N RV +F + G F+ + K L P
Sbjct: 147 SGTGDGQLSLPAGVCTDASGNIIVADRGNSRVSLFDAGGHFLKH---VATKQDGLRAPVA 203
Query: 150 IAVSNTNRVIVSDSNNHRVQI 170
+AVS ++++D N V I
Sbjct: 204 VAVSKKGALVITDGANSSVTI 224
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWP 100
FK GS G+ G + P G+ +I+VAD N RV + HF P
Sbjct: 142 FKFGSSGTGDGQLSLPAGVCTDASGNIIVADRGNSRVSLFDAGGHFLKHVATKQDGLRAP 201
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
+AV ++V+ D +N V + +
Sbjct: 202 VAVAVSKKGALVITDGANSSVTIVK 226
>gi|260785684|ref|XP_002587890.1| hypothetical protein BRAFLDRAFT_87278 [Branchiostoma floridae]
gi|229273045|gb|EEN43901.1| hypothetical protein BRAFLDRAFT_87278 [Branchiostoma floridae]
Length = 817
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 146/309 (47%), Gaps = 55/309 (17%)
Query: 25 GQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP 84
G G RS +K+R+ G G+EPG F PRG+ V P N I V D N RVQV
Sbjct: 536 GTEGAASRSTGDRKQRV-ITFGGMGTEPGKFRDPRGVVVSPSNEIFVTDLYNRRVQVH-- 592
Query: 85 HFDLKTNCVFLAFTWPRGIAVGPDNSIVVAD----------------SSNHRVQVFQSDG 128
T V++ +P + G D +V D + H VQ + +DG
Sbjct: 593 ----STEGVYVRH-FP-TVVPGTDKDMVPYDVCMDGNGTLWVVGRGETVEHVVQ-YSTDG 645
Query: 129 TFVGKFGSMGNKAGQLEHPHY---IAVS-NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTF 184
T + F LE Y IAV TN ++VSD + V VF+ DG+
Sbjct: 646 TAMAGF--------DLEKGIYFRGIAVDMRTNHILVSDPDQGAV-------LVFRPDGSL 690
Query: 185 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQ 244
V ++ + G++ HP +I + ++VSD NN+ V ++D +G+ + FG EGS EGQ
Sbjct: 691 VR---TVRHPRGEMRHPRFITLDGEGNILVSDWNNNYVYVYDESGKFLFQFGGEGSGEGQ 747
Query: 245 LKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNG 304
LK P G+ D G+I V D N R+QIFT G+F+R F EG+AV G
Sbjct: 748 LKQPAGICTDSSGHILVTDYWNYRVQIFTRHGEFVRTVRT-------FSDPEGLAVGPEG 800
Query: 305 NILVCDREN 313
++V +N
Sbjct: 801 QLVVTSWDN 809
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 114/230 (49%), Gaps = 26/230 (11%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F PRG+ V P N I V D N RVQV ++G +V F ++ + P+ + +
Sbjct: 565 FRDPRGVVVSPSNEIFVTDLYNRRVQVHSTEGVYVRHFPTVVPGTDKDMVPYDVCMDGNG 624
Query: 157 RVIV---SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY---IAVS-NT 209
+ V ++ H VQ + +DGT + F LE Y IAV T
Sbjct: 625 TLWVVGRGETVEHVVQ--------YSTDGTAMAGF--------DLEKGIYFRGIAVDMRT 668
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
N ++VSD + V +F +G ++ + G+++ PR + +D +G I V D NN +
Sbjct: 669 NHILVSDPDQGAVLVFRPDGSLVRTVRHP---RGEMRHPRFITLDGEGNILVSDWNNNYV 725
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++ G+FL FG GSG+G+ K G+ S+G+ILV D N+R+Q+F
Sbjct: 726 YVYDESGKFLFQFGGEGSGEGQLKQPAGICTDSSGHILVTDYWNYRVQIF 775
>gi|410932203|ref|XP_003979483.1| PREDICTED: tripartite motif-containing protein 3-like [Takifugu
rubripes]
Length = 711
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 118/233 (50%), Gaps = 25/233 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT +GI+ + +VVADS+N +Q+F +DG F +FG G GQL+ P + V
Sbjct: 490 FTNLQGISASSNGRVVVADSNNQCIQIFSNDGQFKMRFGVRGRSPGQLQRPTGVTVDVNG 549
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++V+D +N V IF G+ F K G AG+L P +AV +I D
Sbjct: 550 DIVVADYDNRWVSIFSAEGK-------FKNKIG-----AGRLMGPKGVAVDKNGHIITVD 597
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEE----------GQLKFPRGVAVDDQGYISVGDSGN 266
+ V IF NG+++T FG G+ + GQ P GV VD G I V D GN
Sbjct: 598 NKACCVFIFQSNGKLVTKFGGRGTADRKFGSHGEGNGQFNAPTGVXVDSNGNIIVADWGN 657
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+RIQ+F G FL S D + G +G+A+ S+G++ V D NH +V+
Sbjct: 658 SRIQVFDSTGSFLSYIN--TSADPLY-GPQGLALTSDGHVAVADSGNHCFKVY 707
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 127/253 (50%), Gaps = 18/253 (7%)
Query: 29 TTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP---H 85
TT + + + L +++GSRG E G FT +GI+ + +VVADS+N +Q+ F
Sbjct: 464 TTKKKENPIEDELIYRVGSRGRERGEFTNLQGISASSNGRVVVADSNNQCIQI-FSNDGQ 522
Query: 86 FDLKTNCVFLA---FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
F ++ + P G+ V + IVVAD N V +F ++G F K G AG
Sbjct: 523 FKMRFGVRGRSPGQLQRPTGVTVDVNGDIVVADYDNRWVSIFSAEGKFKNKIG-----AG 577
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV---FQSDGTFVGKFGSMGNKAGQLE 199
+L P +AV +I D+ V IF NG++ F GT KFGS G GQ
Sbjct: 578 RLMGPKGVAVDKNGHIITVDNKACCVFIFQSNGKLVTKFGGRGTADRKFGSHGEGNGQFN 637
Query: 200 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYI 259
P + V + +IV+D N R+Q+FD G ++ + L P+G+A+ G++
Sbjct: 638 APTGVXVDSNGNIIVADWGNSRIQVFDSTGSFLSYINTSADP---LYGPQGLALTSDGHV 694
Query: 260 SVGDSGNNRIQIF 272
+V DSGN+ +++
Sbjct: 695 AVADSGNHCFKVY 707
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
+ + GS G + G+ + I+ S+ RV+V+DSNN +QIF +G+ FG G G
Sbjct: 476 LIYRVGSRGRERGEFTNLQGISASSNGRVVVADSNNQCIQIFSNDGQFKMRFGVRGRSPG 535
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
QL+ P GV VD G I V D N + IF+ +G+F G G G +GVAV N
Sbjct: 536 QLQRPTGVTVDVNGDIVVADYDNRWVSIFSAEGKFKNKIGA-----GRLMGPKGVAVDKN 590
Query: 304 GNILVCD 310
G+I+ D
Sbjct: 591 GHIITVD 597
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ +I GS G E G+ +G++ G + V DS N IQIF+ DGQF FG G
Sbjct: 472 IEDELIYRVGSRGRERGEFTNLQGISASSNGRVVVADSNNQCIQIFSNDGQFKMRFGVRG 531
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GV V NG+I+V D +N + +F
Sbjct: 532 RSPGQLQRPTGVTVDVNGDIVVADYDNRWVSIF 564
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 25/114 (21%)
Query: 20 LVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRV 79
LV+ G GT R K GS G G F P G+ V + +I+VAD N R+
Sbjct: 612 LVTKFGGRGTADR-----------KFGSHGEGNGQFNAPTGVXVDSNGNIIVADWGNSRI 660
Query: 80 QVCFPHFDLKTNCVFLAFT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
QV FD + FL++ P+G+A+ D + VADS NH +V++
Sbjct: 661 QV----FD--STGSFLSYINTSADPLYGPQGLALTSDGHVAVADSGNHCFKVYR 708
>gi|307174604|gb|EFN65026.1| RING finger protein nhl-1 [Camponotus floridanus]
Length = 274
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 125/230 (54%), Gaps = 13/230 (5%)
Query: 100 PRGIAVGPDN-SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P+G+A +N I V D H + VF G V + + G+ +L P IA V
Sbjct: 48 PQGLAFLQENDEIYVTDKWKHCIFVFDHKGELVRRMCNKGHGESELRSPEGIAFHPERSV 107
Query: 159 I-VSDSNNHRVQIFDVNGRVF--------QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
+ V+D+ N+RVQ+ + NG Q+ GT +F + QL P +AV+ T
Sbjct: 108 LYVADTGNNRVQVLERNGAYLDSIGPKSKQAKGTV--RFRRTDSVPSQLNQPTDVAVTTT 165
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
R++V+DS NH V+IF+ +G+++ + G G+ +G + P + +D + I VGD+GN R+
Sbjct: 166 -RIVVADSGNHNVKIFNHDGQILQTIGDVGTAKGFFRSPEVLRIDKKENIIVGDAGNGRV 224
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
QIF+P G+FLR G + +F + G+ V +N +ILV D N+ I +F
Sbjct: 225 QIFSPKGEFLRMLGDKKTQGHKFGWVSGIFVTNNYDILVSDSRNNFIYLF 274
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 87/187 (46%), Gaps = 27/187 (14%)
Query: 58 PRGIAVGPDNSIV-VADSSNHRVQVCF---PHFD---------------LKTNCVFLAFT 98
P GIA P+ S++ VAD+ N+RVQV + D +T+ V
Sbjct: 96 PEGIAFHPERSVLYVADTGNNRVQVLERNGAYLDSIGPKSKQAKGTVRFRRTDSVPSQLN 155
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P +AV IVVADS NH V++F DG + G +G G P + + +
Sbjct: 156 QPTDVAV-TTTRIVVADSGNHNVKIFNHDGQILQTIGDVGTAKGFFRSPEVLRIDKKENI 214
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
IV D+ N RVQIF G + +G + G+K G + I V+N ++VSDS
Sbjct: 215 IVGDAGNGRVQIFSPKGEFLR----MLGDKKTQGHKFGWVSG---IFVTNNYDILVSDSR 267
Query: 219 NHRVQIF 225
N+ + +F
Sbjct: 268 NNFIYLF 274
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 50 SEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHF--------DLKTNCVFLAFTWPR 101
S P P +AV IVVADS NH V++ F H D+ T F F P
Sbjct: 149 SVPSQLNQPTDVAV-TTTRIVVADSGNHNVKI-FNHDGQILQTIGDVGTAKGF--FRSPE 204
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ + +I+V D+ N RVQ+F G F+ G + + I V+N ++VS
Sbjct: 205 VLRIDKKENIIVGDAGNGRVQIFSPKGEFLRMLGDKKTQGHKFGWVSGIFVTNNYDILVS 264
Query: 162 DSNNHRVQIF 171
DS N+ + +F
Sbjct: 265 DSRNNFIYLF 274
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH-------FDLKTNCVFLAF 97
IG G+ G F P + + +I+V D+ N RVQ+ P D KT F
Sbjct: 190 IGDVGTAKGFFRSPEVLRIDKKENIIVGDAGNGRVQIFSPKGEFLRMLGDKKTQG--HKF 247
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVF 124
W GI V + I+V+DS N+ + +F
Sbjct: 248 GWVSGIFVTNNYDILVSDSRNNFIYLF 274
>gi|291239557|ref|XP_002739689.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 744
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 142/286 (49%), Gaps = 16/286 (5%)
Query: 38 KRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF 97
KR L K G G++ G F++P + V + +V D N+R+Q+ + D K F
Sbjct: 469 KRGLLHKYGQVGTDSGQFSYPESVTVTRNGGTLVCDRGNNRLQLFSLNGDHKKTVQINDF 528
Query: 98 T---WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
P D + + N +V + + ++ FGS G+L++P I +S
Sbjct: 529 DHAFLPYFATQSRDGYFFITGNGNRQVIICDENLKYIRCFGS-----GELKYPRGITISP 583
Query: 155 TN-RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
N R+ V D+ +H V R++ DG ++ FGS GNK G+L +P I++ VI
Sbjct: 584 VNGRLYVVDNGSHCV-------RIYYQDGEYIKSFGSQGNKEGELSNPWGISIGVDGNVI 636
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
V+D++NHR+Q+FD +G + SFG G+ +L+ P GV+ D G + V D N+RIQ +
Sbjct: 637 VADNSNHRMQVFDGDGEYLYSFGDCGNGSDRLQNPLGVSTDRDGNVYVCDHNNHRIQKYD 696
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G++L G +G+ G ++V D N+ I+VF
Sbjct: 697 SHGKYLTRIDTAKDGLCNPRGICITDDKPFGKVVVADFGNNCIKVF 742
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 19/149 (12%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y Q GS+G++ G + P GI++G D +++VAD+SNHR+QV FD ++
Sbjct: 601 YYQDGEYIKSFGSQGNKEGELSNPWGISIGVDGNVIVADNSNHRMQV----FDGDGEYLY 656
Query: 95 L---------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE 145
P G++ D ++ V D +NHR+Q + S G ++ + + K G L
Sbjct: 657 SFGDCGNGSDRLQNPLGVSTDRDGNVYVCDHNNHRIQKYDSHGKYLTRIDTA--KDG-LC 713
Query: 146 HPHYIAVSNTN---RVIVSDSNNHRVQIF 171
+P I +++ +V+V+D N+ +++F
Sbjct: 714 NPRGICITDDKPFGKVVVADFGNNCIKVF 742
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
P L +G G+ G+F E V V NG LVCDR N+R+Q+F
Sbjct: 468 PKRGLLHKYGQVGTDSGQFSYPESVTVTRNGGTLVCDRGNNRLQLF 513
>gi|312075930|ref|XP_003140635.1| NCL-1 protein [Loa loa]
Length = 789
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 120/220 (54%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT- 155
FT P G+AV N I+VAD++NHR+QVF +G F +FG G + GQL +P+ +AV+
Sbjct: 522 FTEPSGVAVNAQNDIIVADTNNHRIQVFDKEGRFKFQFGECGKRDGQLLYPNRVAVNRLT 581
Query: 156 -NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ ++ S H++QI++ G+ F+ KFG A L+HP + V + R+IV
Sbjct: 582 GDFIVTERSPTHQIQIYNQYGQ-------FLRKFG-----ANILQHPRGVCVDSKGRIIV 629
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD+ G ++ F S L+FP GV + + I + D+ + I++F
Sbjct: 630 IECKVMRVIIFDMFGNILQKF----SCSRYLEFPNGVCANHKQEILISDNRAHCIKVFNY 685
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
DGQF+R G G+G GV + G+++V D N+
Sbjct: 686 DGQFVRQIG----GEGITNYPIGVGINYAGDVVVADNHNN 721
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 146/302 (48%), Gaps = 42/302 (13%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
PR+Q QK K G G G FT P G+AV N I+VAD++NHR+QV FD +
Sbjct: 497 PRAQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQV----FDKE 552
Query: 90 TNCVFL---------AFTWPRGIAVG--PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G F+ KFG
Sbjct: 553 GRFKFQFGECGKRDGQLLYPNRVAVNRLTGDFIVTERSPTHQIQIYNQYGQFLRKFG--- 609
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V + R+IV + RV IFD+ G + Q KF + L
Sbjct: 610 --ANILQHPRGVCVDSKGRIIVIECKVMRVIIFDMFGNILQ-------KFSC----SRYL 656
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + ++ +++SD+ H +++F+ +G+ + G EG +P GV ++ G
Sbjct: 657 EFPNGVCANHKQEILISDNRAHCIKVFNYDGQFVRQIGGEGIT----NYPIGVGINYAGD 712
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
+ V D+ NN + +F+ DG + A F VA++ +G++++ ++ +R+
Sbjct: 713 VVVADNHNNFNLTVFSQDGTMISALESKVKHAQCF----DVALVEDGSVVLASKD-YRLY 767
Query: 318 VF 319
++
Sbjct: 768 LY 769
>gi|393904741|gb|EFO23437.2| NCL-1 protein [Loa loa]
Length = 808
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 120/220 (54%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT- 155
FT P G+AV N I+VAD++NHR+QVF +G F +FG G + GQL +P+ +AV+
Sbjct: 541 FTEPSGVAVNAQNDIIVADTNNHRIQVFDKEGRFKFQFGECGKRDGQLLYPNRVAVNRLT 600
Query: 156 -NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ ++ S H++QI++ G+ F+ KFG A L+HP + V + R+IV
Sbjct: 601 GDFIVTERSPTHQIQIYNQYGQ-------FLRKFG-----ANILQHPRGVCVDSKGRIIV 648
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD+ G ++ F S L+FP GV + + I + D+ + I++F
Sbjct: 649 IECKVMRVIIFDMFGNILQKF----SCSRYLEFPNGVCANHKQEILISDNRAHCIKVFNY 704
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
DGQF+R G G+G GV + G+++V D N+
Sbjct: 705 DGQFVRQIG----GEGITNYPIGVGINYAGDVVVADNHNN 740
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 149/304 (49%), Gaps = 46/304 (15%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
PR+Q QK K G G G FT P G+AV N I+VAD++NHR+QV FD +
Sbjct: 516 PRAQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQV----FDKE 571
Query: 90 TNCVFL---------AFTWPRGIAVG--PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G F+ KFG
Sbjct: 572 GRFKFQFGECGKRDGQLLYPNRVAVNRLTGDFIVTERSPTHQIQIYNQYGQFLRKFG--- 628
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V + R+IV + RV IFD+ G + Q KF + L
Sbjct: 629 --ANILQHPRGVCVDSKGRIIVIECKVMRVIIFDMFGNILQ-------KFSC----SRYL 675
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + ++ +++SD+ H +++F+ +G+ + G EG +P GV ++ G
Sbjct: 676 EFPNGVCANHKQEILISDNRAHCIKVFNYDGQFVRQIGGEGIT----NYPIGVGINYAGD 731
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHR 315
+ V D+ NN + +F+ DG + A + + K + VA++ +G++++ ++ +R
Sbjct: 732 VVVADNHNNFNLTVFSQDGTMISAL------ESKVKHAQCFDVALVEDGSVVLASKD-YR 784
Query: 316 IQVF 319
+ ++
Sbjct: 785 LYLY 788
>gi|260785702|ref|XP_002587899.1| hypothetical protein BRAFLDRAFT_87287 [Branchiostoma floridae]
gi|229273054|gb|EEN43910.1| hypothetical protein BRAFLDRAFT_87287 [Branchiostoma floridae]
Length = 779
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 130/271 (47%), Gaps = 31/271 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC------FPHFDLKTNCVFLAFTW 99
G G EPG F+ PRGI V P N I V D SN R+QV HF
Sbjct: 515 GREGPEPGKFSNPRGIVVSPSNEIFVTDFSNRRIQVYSTVGVYLRHFPTVVPGTEDKDMR 574
Query: 100 PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI---AVS 153
P + + + ++ V +++H VQ + +DGT + F LE +I AV
Sbjct: 575 PHDVCMDGNGTLWVVGRGQTADHVVQ-YSTDGTVMAGF--------DLEKILFIRGIAVD 625
Query: 154 -NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
TN ++V+D N V V + DG+ V + G++ P YI V +
Sbjct: 626 MRTNHILVTDGENSEVL-------VIRPDGSLVRTV--RHPRGGEMIRPRYITVDGEGNI 676
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+V D NN+ V ++D +G+ + FG +GS EGQL PRG+ D G+I V DSGN R+QIF
Sbjct: 677 LVFDWNNNSVYVYDESGKFLFQFGGKGSGEGQLDDPRGICTDSSGHILVADSGNERVQIF 736
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
T G+F R DG G EG V+++
Sbjct: 737 TRHGEFDRTVRTGFKPDGLAVGPEGQLVVTS 767
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 114/232 (49%), Gaps = 28/232 (12%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM--GNKAGQLEHPHYIAVSN 154
F+ PRGI V P N I V D SN R+QV+ + G ++ F ++ G + + PH + +
Sbjct: 524 FSNPRGIVVSPSNEIFVTDFSNRRIQVYSTVGVYLRHFPTVVPGTEDKDM-RPHDVCMDG 582
Query: 155 TNRVIV---SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYI---AVS- 207
+ V + +H VQ + +DGT + F LE +I AV
Sbjct: 583 NGTLWVVGRGQTADHVVQ--------YSTDGTVMAGF--------DLEKILFIRGIAVDM 626
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
TN ++V+D N V + +G ++ + G++ PR + VD +G I V D NN
Sbjct: 627 RTNHILVTDGENSEVLVIRPDGSLVRTV--RHPRGGEMIRPRYITVDGEGNILVFDWNNN 684
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ ++ G+FL FG GSG+G+ G+ S+G+ILV D N R+Q+F
Sbjct: 685 SVYVYDESGKFLFQFGGKGSGEGQLDDPRGICTDSSGHILVADSGNERVQIF 736
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH--FDLKTNC 92
Y + + F+ G +GS G PRGI I+VADS N RVQ+ H FD
Sbjct: 689 YDESGKFLFQFGGKGSGEGQLDDPRGICTDSSGHILVADSGNERVQIFTRHGEFDRTVRT 748
Query: 93 VFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
F P G+AVGP+ +VV N V ++ S
Sbjct: 749 GF----KPDGLAVGPEGQLVVTSYLNDIVAIYPS 778
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW--GSGD 289
+ +FG EG E G+ PRG+ V I V D N RIQ+++ G +LR F G+ D
Sbjct: 511 VITFGREGPEPGKFSNPRGIVVSPSNEIFVTDFSNRRIQVYSTVGVYLRHFPTVVPGTED 570
Query: 290 GEFKGLEGVAVMSNGNILVCDR 311
+ + + V + NG + V R
Sbjct: 571 KDMRPHD-VCMDGNGTLWVVGR 591
>gi|402594976|gb|EJW88902.1| hypothetical protein WUBG_00188 [Wuchereria bancrofti]
Length = 788
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 120/220 (54%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT- 155
FT P G+AV N I+VAD++NHR+QVF +G F +FG G + GQL +P+ +AV+
Sbjct: 522 FTEPSGVAVNAQNDIIVADTNNHRIQVFDKEGRFKFQFGECGKRDGQLLYPNRVAVNRLT 581
Query: 156 -NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ ++ S H++QI++ G+ F+ KFG A L+HP + V + R+IV
Sbjct: 582 GDFIVTERSPTHQIQIYNQYGQ-------FLRKFG-----ANILQHPRGVCVDSKGRIIV 629
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD+ G ++ F S L+FP GV + + I + D+ + I++F
Sbjct: 630 IECKVMRVIIFDMFGNILQKF----SCSRYLEFPNGVCTNHKQEILISDNRAHCIKVFNY 685
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
DGQF+R G G+G GV + G+++V D N+
Sbjct: 686 DGQFVRQIG----GEGITNYPIGVGINYAGDVVVADNHNN 721
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 146/302 (48%), Gaps = 42/302 (13%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
PR+Q QK K G G G FT P G+AV N I+VAD++NHR+QV FD +
Sbjct: 497 PRAQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQV----FDKE 552
Query: 90 TNCVFL---------AFTWPRGIAVG--PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G F+ KFG
Sbjct: 553 GRFKFQFGECGKRDGQLLYPNRVAVNRLTGDFIVTERSPTHQIQIYNQYGQFLRKFG--- 609
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V + R+IV + RV IFD+ G + Q KF + L
Sbjct: 610 --ANILQHPRGVCVDSKGRIIVIECKVMRVIIFDMFGNILQ-------KFSC----SRYL 656
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + ++ +++SD+ H +++F+ +G+ + G EG +P GV ++ G
Sbjct: 657 EFPNGVCTNHKQEILISDNRAHCIKVFNYDGQFVRQIGGEGIT----NYPIGVGINYAGD 712
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
+ V D+ NN + +F+ DG + A F VA++ +G++++ ++ +R+
Sbjct: 713 VVVADNHNNFNLTVFSQDGTMISALESKVKHAQCF----DVALVEDGSVVLASKD-YRLY 767
Query: 318 VF 319
++
Sbjct: 768 LY 769
>gi|170575166|ref|XP_001893127.1| B-box type zinc-finger protein ncl-1 [Brugia malayi]
gi|158601023|gb|EDP38039.1| B-box type zinc-finger protein ncl-1, putative [Brugia malayi]
Length = 788
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 120/220 (54%), Gaps = 22/220 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT- 155
FT P G+AV N I+VAD++NHR+QVF +G F +FG G + GQL +P+ +AV+
Sbjct: 522 FTEPSGVAVNAQNDIIVADTNNHRIQVFDKEGRFKFQFGECGKRDGQLLYPNRVAVNRLT 581
Query: 156 -NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ ++ S H++QI++ G+ F+ KFG A L+HP + V + R+IV
Sbjct: 582 GDFIVTERSPTHQIQIYNQYGQ-------FLRKFG-----ANILQHPRGVCVDSKGRIIV 629
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD+ G ++ F S L+FP GV + + I + D+ + I++F
Sbjct: 630 IECKVMRVIIFDMFGNILQKF----SCSRYLEFPNGVCTNHKQEILISDNRAHCIKVFNY 685
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
DGQF+R G G+G GV + G+++V D N+
Sbjct: 686 DGQFVRQIG----GEGITNYPIGVGINYAGDVVVADNHNN 721
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 146/302 (48%), Gaps = 42/302 (13%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
PR+Q QK K G G G FT P G+AV N I+VAD++NHR+QV FD +
Sbjct: 497 PRAQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQV----FDKE 552
Query: 90 TNCVFL---------AFTWPRGIAVG--PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
F +P +AV + IV S H++Q++ G F+ KFG
Sbjct: 553 GRFKFQFGECGKRDGQLLYPNRVAVNRLTGDFIVTERSPTHQIQIYNQYGQFLRKFG--- 609
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V + R+IV + RV IFD+ G + Q KF + L
Sbjct: 610 --ANILQHPRGVCVDSKGRIIVIECKVMRVIIFDMFGNILQ-------KFSC----SRYL 656
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + ++ +++SD+ H +++F+ +G+ + G EG +P GV ++ G
Sbjct: 657 EFPNGVCTNHKQEILISDNRAHCIKVFNYDGQFVRQIGGEGIT----NYPIGVGINYAGD 712
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
+ V D+ NN + +F+ DG + A F VA++ +G++++ ++ +R+
Sbjct: 713 VVVADNHNNFNLTVFSQDGTMISALESKVKHAQCF----DVALVEDGSVVLASKD-YRLY 767
Query: 318 VF 319
++
Sbjct: 768 LY 769
>gi|260785798|ref|XP_002587947.1| hypothetical protein BRAFLDRAFT_87335 [Branchiostoma floridae]
gi|229273102|gb|EEN43958.1| hypothetical protein BRAFLDRAFT_87335 [Branchiostoma floridae]
Length = 932
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 134/268 (50%), Gaps = 25/268 (9%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTW 99
G +GSEPG F++PRG+ V P N IVVAD N RVQV HF +
Sbjct: 668 GGKGSEPGKFSYPRGVVVSPSNEIVVADLYNRRVQVHSTEGVYLRHFPTVVPGTGDKNMY 727
Query: 100 PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 155
P + + ++ V ++++H VQ + +DGT + +F K G H IAV T
Sbjct: 728 PYDVCMDGSGTLWVVGDGETTDHVVQ-YSTDGTAMARFDM---KKGY--HFRGIAVDMRT 781
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
N ++V+D+ + V VF+ DG+ V + G++ HP Y+ V ++VS
Sbjct: 782 NHILVTDAGDGAVH-------VFRPDGSLVRTVRY--PRDGEITHPRYVTVDGEGNILVS 832
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D + H V ++D +G+ + FG GS +GQL P G+ D G+I V D N +QIFT
Sbjct: 833 DWDTHSVCVYDESGKFLFQFGGLGSGKGQLNGPLGICTDSSGHILVADYWNEGVQIFTRH 892
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
G+F+ +G G EG V++N
Sbjct: 893 GKFVHTVRTGFQPEGLAVGPEGRLVVTN 920
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 119/228 (52%), Gaps = 20/228 (8%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE-HPHYIAVSNT 155
F++PRG+ V P N IVVAD N RVQV ++G ++ F ++ G +P+ + + +
Sbjct: 677 FSYPRGVVVSPSNEIVVADLYNRRVQVHSTEGVYLRHFPTVVPGTGDKNMYPYDVCMDGS 736
Query: 156 NRVIV---SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNR 211
+ V ++ +H VQ + +DGT + +F K G H IAV TN
Sbjct: 737 GTLWVVGDGETTDHVVQ--------YSTDGTAMARFDM---KKGY--HFRGIAVDMRTNH 783
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D+ + V +F +G ++ + +G++ PR V VD +G I V D + + +
Sbjct: 784 ILVTDAGDGAVHVFRPDGSLVRTV--RYPRDGEITHPRYVTVDGEGNILVSDWDTHSVCV 841
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ G+FL FG GSG G+ G G+ S+G+ILV D N +Q+F
Sbjct: 842 YDESGKFLFQFGGLGSGKGQLNGPLGICTDSSGHILVADYWNEGVQIF 889
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 48/178 (26%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSF------------ 235
FG G++ G+ +P + VS +N ++V+D N RVQ+ G + F
Sbjct: 667 FGGKGSEPGKFSYPRGVVVSPSNEIVVADLYNRRVQVHSTEGVYLRHFPTVVPGTGDKNM 726
Query: 236 ----------------------------GSEGSEEGQLKFP-----RGVAVDDQ-GYISV 261
++G+ + RG+AVD + +I V
Sbjct: 727 YPYDVCMDGSGTLWVVGDGETTDHVVQYSTDGTAMARFDMKKGYHFRGIAVDMRTNHILV 786
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D+G+ + +F PDG +R DGE V V GNILV D + H + V+
Sbjct: 787 TDAGDGAVHVFRPDGSLVRTVRY--PRDGEITHPRYVTVDGEGNILVSDWDTHSVCVY 842
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ +FG +GSE G+ +PRGV V I V D N R+Q+ + +G +LR F G G+
Sbjct: 664 VITFGGKGSEPGKFSYPRGVVVSPSNEIVVADLYNRRVQVHSTEGVYLRHFPTVVPGTGD 723
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G GS G P GI I+VAD N VQ+ H + V
Sbjct: 842 YDESGKFLFQFGGLGSGKGQLNGPLGICTDSSGHILVADYWNEGVQIFTRHGKF-VHTVR 900
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
F P G+AVGP+ +VV + N V V+ S
Sbjct: 901 TGFQ-PEGLAVGPEGRLVVTNDLNDIVTVYPS 931
>gi|443730824|gb|ELU16176.1| hypothetical protein CAPTEDRAFT_46788, partial [Capitella teleta]
Length = 163
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 99/170 (58%), Gaps = 10/170 (5%)
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
+AV+++ VIV+DS + I D +GR ++ KFG G+ G P ++ V
Sbjct: 1 VAVASSGHVIVADSELDMIYIMDKHGR-------YLKKFGGTGSSPGHFNRPTFVCVGEN 53
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
+ +IVSD +NHR+Q+FD +G+ + +FG GS +GQL P GV VD G I V D GN RI
Sbjct: 54 DCIIVSDGDNHRIQVFDKSGKFLYAFGEAGSGKGQLCMPFGVVVDYHGNILVVDGGNQRI 113
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
QIF G+F+ C S + G+AV ++G++ V DR+NH ++ F
Sbjct: 114 QIFKYGGEFVS---CIESLADPMRAPRGIAVTTDGHVWVADRDNHCVKKF 160
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 15/170 (8%)
Query: 61 IAVGPDNSIVVADSSNHRVQVCFPHFD-LK----TNCVFLAFTWPRGIAVGPDNSIVVAD 115
+AV ++VADS + + H LK T F P + VG ++ I+V+D
Sbjct: 1 VAVASSGHVIVADSELDMIYIMDKHGRYLKKFGGTGSSPGHFNRPTFVCVGENDCIIVSD 60
Query: 116 SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 175
NHR+QVF G F+ FG G+ GQL P + V ++V D N R+QI
Sbjct: 61 GDNHRIQVFDKSGKFLYAFGEAGSGKGQLCMPFGVVVDYHGNILVVDGGNQRIQI----- 115
Query: 176 RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
F+ G FV S+ A + P IAV+ V V+D +NH V+ F
Sbjct: 116 --FKYGGEFVSCIESL---ADPMRAPRGIAVTTDGHVWVADRDNHCVKKF 160
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 18/142 (12%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF-- 97
R K G GS PG F P + VG ++ I+V+D NHR+QV FD K+ AF
Sbjct: 27 RYLKKFGGTGSSPGHFNRPTFVCVGENDCIIVSDGDNHRIQV----FD-KSGKFLYAFGE 81
Query: 98 --------TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
P G+ V +I+V D N R+Q+F+ G FV S+ A + P
Sbjct: 82 AGSGKGQLCMPFGVVVDYHGNILVVDGGNQRIQIFKYGGEFVSCIESL---ADPMRAPRG 138
Query: 150 IAVSNTNRVIVSDSNNHRVQIF 171
IAV+ V V+D +NH V+ F
Sbjct: 139 IAVTTDGHVWVADRDNHCVKKF 160
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 28 GTTPRSQYLQKR-RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHF 86
G R Q K + + G GS G P G+ V +I+V D N R+Q+ F +
Sbjct: 61 GDNHRIQVFDKSGKFLYAFGEAGSGKGQLCMPFGVVVDYHGNILVVDGGNQRIQI-FKYG 119
Query: 87 DLKTNCV-FLA--FTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+C+ LA PRGIAV D + VAD NH V+ F+
Sbjct: 120 GEFVSCIESLADPMRAPRGIAVTTDGHVWVADRDNHCVKKFK 161
>gi|260818703|ref|XP_002604522.1| hypothetical protein BRAFLDRAFT_220493 [Branchiostoma floridae]
gi|229289849|gb|EEN60533.1| hypothetical protein BRAFLDRAFT_220493 [Branchiostoma floridae]
Length = 227
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 115/232 (49%), Gaps = 43/232 (18%)
Query: 123 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR------ 176
V+ DG F+ +FG G+ GQL +PH I +IV+DS N RV++FD G+
Sbjct: 1 VYNGDGQFLFQFGGKGSGEGQLYNPHGICTDRAGNIIVADSLNSRVEMFDKKGKFLKHIT 60
Query: 177 -----------------------------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
VF+ DGT V ++G + G ++HP YI V
Sbjct: 61 TEVKAPCGIAMAPQGHLVVTDEGENTVILVFRPDGTLVR---TVGQQQG-MKHPWYITVD 116
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
++VSD + H V +++ +G+ + FG EGS EGQLK PRG+ D G I V D GN
Sbjct: 117 VEGNILVSDYDGHCVYMYNEDGQFLFQFGGEGSGEGQLKGPRGICTDRAGNIIVADWGNR 176
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
R+++F G+FL+ + K + VA+ + G ++V D E H + +F
Sbjct: 177 RVEMFDKTGKFLKHINI----ATDVKVPQAVAMATQGQLVVTDYEKHTVSIF 224
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 115/234 (49%), Gaps = 23/234 (9%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK---TNCVFLAFTW 99
F+ G +GS G P GI +I+VADS N RV++ FD K +
Sbjct: 10 FQFGGKGSGEGQLYNPHGICTDRAGNIIVADSLNSRVEM----FDKKGKFLKHITTEVKA 65
Query: 100 PRGIAVGPDNSIVVADS-SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P GIA+ P +VV D N + VF+ DGT V ++G + G ++HP YI V +
Sbjct: 66 PCGIAMAPQGHLVVTDEGENTVILVFRPDGTLV---RTVGQQQG-MKHPWYITVDVEGNI 121
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+VSD + H V +++ DG F+ +FG G+ GQL+ P I +IV+D
Sbjct: 122 LVSDYDGHCVYMYN-------EDGQFLFQFGGEGSGEGQLKGPRGICTDRAGNIIVADWG 174
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
N RV++FD G+ + + +K P+ VA+ QG + V D + + IF
Sbjct: 175 NRRVEMFDKTGKFLKHI----NIATDVKVPQAVAMATQGQLVVTDYEKHTVSIF 224
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDL 88
Y + + F+ G GS G PRGI +I+VAD N RV++ H ++
Sbjct: 134 YNEDGQFLFQFGGEGSGEGQLKGPRGICTDRAGNIIVADWGNRRVEMFDKTGKFLKHINI 193
Query: 89 KTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
T+ P+ +A+ +VV D H V +FQ+
Sbjct: 194 ATDV-----KVPQAVAMATQGQLVVTDYEKHTVSIFQN 226
>gi|225850983|ref|YP_002731217.1| NHL repeat containing protein [Persephonella marina EX-H1]
gi|225646309|gb|ACO04495.1| NHL repeat containing protein [Persephonella marina EX-H1]
Length = 328
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 123/254 (48%), Gaps = 20/254 (7%)
Query: 67 NSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
++ + D N +V D N F+ P + V +I V+DS V VF +
Sbjct: 87 KTLFIFDFKNKKV-------DYIDNIGDYKFSSPIDVVVDKKGNIYVSDSVLGAVFVFDN 139
Query: 127 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSNNHRVQIFDVNGRVFQSDGTFV 185
+ + GK GS G L+ P + +++ + VSD+ ++ IFD+ G++ +
Sbjct: 140 NKRYKGKIGS-----GFLKRPTGLTINHKKGWLYVSDTVAGKIYIFDLKGKL-------I 187
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL 245
+ G G G+ P +I + + V D+ N RVQIFD NG+ + FG G+ G
Sbjct: 188 KQIGKTGKGDGEFNKPTFITLDKKGNLYVVDTMNARVQIFDENGKFLRKFGKRGTVIGTF 247
Query: 246 KFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
PRG+AVD G I V D+ + +QIF GQ L G +G+ DGEF E +++ S
Sbjct: 248 ANPRGIAVDSDGNIYVTDTLLSAVQIFNQKGQLLLVVGYYGTRDGEFAFPEDISISSKNY 307
Query: 306 ILVCDRENHRIQVF 319
I V D N RIQV
Sbjct: 308 IFVSDSYNMRIQVL 321
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 5/139 (3%)
Query: 38 KRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC-----FPHFDLKTNC 92
K +L +IG G G F P I + ++ V D+ N RVQ+ F K
Sbjct: 183 KGKLIKQIGKTGKGDGEFNKPTFITLDKKGNLYVVDTMNARVQIFDENGKFLRKFGKRGT 242
Query: 93 VFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
V F PRGIAV D +I V D+ VQ+F G + G G + G+ P I++
Sbjct: 243 VIGTFANPRGIAVDSDGNIYVTDTLLSAVQIFNQKGQLLLVVGYYGTRDGEFAFPEDISI 302
Query: 153 SNTNRVIVSDSNNHRVQIF 171
S+ N + VSDS N R+Q+
Sbjct: 303 SSKNYIFVSDSYNMRIQVL 321
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
K G RG+ G F PRGIAV D +I V D+ VQ+ F+ K + +
Sbjct: 236 KFGKRGTVIGTFANPRGIAVDSDGNIYVTDTLLSAVQI----FNQKGQLLLVVGYYGTRD 291
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
F +P I++ N I V+DS N R+QV +
Sbjct: 292 GEFAFPEDISISSKNYIFVSDSYNMRIQVLR 322
>gi|312385416|gb|EFR29927.1| hypothetical protein AND_00801 [Anopheles darlingi]
Length = 180
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 58/64 (90%)
Query: 256 QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHR 315
QGYI V DSGNNRIQIF PDG FLRAFG WGSGD EFKGLEGVA+MSNGNILVCDRENHR
Sbjct: 117 QGYICVADSGNNRIQIFHPDGSFLRAFGSWGSGDAEFKGLEGVAIMSNGNILVCDRENHR 176
Query: 316 IQVF 319
+QVF
Sbjct: 177 VQVF 180
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 111 IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
I VADS N+R+Q+F DG+F+ FGS G+ + + +A+ + ++V D NHRVQ+
Sbjct: 120 ICVADSGNNRIQIFHPDGSFLRAFGSWGSGDAEFKGLEGVAIMSNGNILVCDRENHRVQV 179
Query: 171 F 171
F
Sbjct: 180 F 180
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
+ V+DS N+R+QIF +G + +FGS GS + + K GVA+ G I V D N+R+Q+
Sbjct: 120 ICVADSGNNRIQIFHPDGSFLRAFGSWGSGDAEFKGLEGVAIMSNGNILVCDRENHRVQV 179
Query: 272 F 272
F
Sbjct: 180 F 180
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
+ V+DS N+R+QIF DG+F+ FGS G+ + + +A+ + ++V D
Sbjct: 120 ICVADSGNNRIQIF-------HPDGSFLRAFGSWGSGDAEFKGLEGVAIMSNGNILVCDR 172
Query: 218 NNHRVQIF 225
NHRVQ+F
Sbjct: 173 ENHRVQVF 180
>gi|260813567|ref|XP_002601489.1| hypothetical protein BRAFLDRAFT_241726 [Branchiostoma floridae]
gi|229286785|gb|EEN57501.1| hypothetical protein BRAFLDRAFT_241726 [Branchiostoma floridae]
Length = 251
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 117/254 (46%), Gaps = 47/254 (18%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
+P + V + ++V+DS+ V V+ +G F+ KFG G GQL PH I +
Sbjct: 1 MEYPHYVTVDKEGRVLVSDSAGPYVYVYDEEGEFLFKFGGWGEGEGQLNRPHGICTDSLG 60
Query: 157 RVIVSDSNNHRVQIFDVNGR-------------------------------------VFQ 179
R+ V+DS N RV +FD +G VF+
Sbjct: 61 RIFVADSGNDRVDMFDSSGEFLSHAIPDIKQPLAVAITRRGNLIVSNIVENGNSVVHVFK 120
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
+G + ++G++ G +E+PHY+ V RV+VSDS V ++D G + FG G
Sbjct: 121 PNGKLLR---TIGDQQG-MEYPHYVTVDKEGRVLVSDSAGPYVYVYDEEGEFLFKFGGWG 176
Query: 240 SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVA 299
EGQL P G+ D G I V DSGN+R+ +F G+FL + K VA
Sbjct: 177 EGEGQLNRPHGICTDSLGRILVADSGNDRVDMFDSSGEFLS------HAIPDIKQPLAVA 230
Query: 300 VMSNGNILVCDREN 313
+ GN++V + EN
Sbjct: 231 ITRRGNLVVSNSEN 244
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 96/216 (44%), Gaps = 47/216 (21%)
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
+E+PHY+ V RV+VSDS V ++D +G F+ KFG G GQL PH
Sbjct: 1 MEYPHYVTVDKEGRVLVSDSAGPYVYVYD-------EEGEFLFKFGGWGEGEGQLNRPHG 53
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGR--------------------------------- 230
I + R+ V+DS N RV +FD +G
Sbjct: 54 ICTDSLGRIFVADSGNDRVDMFDSSGEFLSHAIPDIKQPLAVAITRRGNLIVSNIVENGN 113
Query: 231 -VITSFGSEGS------EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
V+ F G ++ +++P V VD +G + V DS + ++ +G+FL FG
Sbjct: 114 SVVHVFKPNGKLLRTIGDQQGMEYPHYVTVDKEGRVLVSDSAGPYVYVYDEEGEFLFKFG 173
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
WG G+G+ G+ S G ILV D N R+ +F
Sbjct: 174 GWGEGEGQLNRPHGICTDSLGRILVADSGNDRVDMF 209
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 114/235 (48%), Gaps = 21/235 (8%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y ++ FK G G G P GI I VADS N RV + + ++ +
Sbjct: 28 YDEEGEFLFKFGGWGEGEGQLNRPHGICTDSLGRIFVADSGNDRVDMFDSSGEFLSHAI- 86
Query: 95 LAFTWPRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P +A+ +++V+ ++ N V VF+ +G + ++G++ G +E+PHY+
Sbjct: 87 PDIKQPLAVAITRRGNLIVSNIVENGNSVVHVFKPNGKLL---RTIGDQQG-MEYPHYVT 142
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V RV+VSDS V ++D +G F+ KFG G GQL PH I + R
Sbjct: 143 VDKEGRVLVSDSAGPYVYVYD-------EEGEFLFKFGGWGEGEGQLNRPHGICTDSLGR 195
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
++V+DS N RV +FD +G ++ + +K P VA+ +G + V +S N
Sbjct: 196 ILVADSGNDRVDMFDSSGEFLSHAIPD------IKQPLAVAITRRGNLVVSNSEN 244
>gi|291235470|ref|XP_002737667.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 638
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 135/270 (50%), Gaps = 27/270 (10%)
Query: 18 TLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVA----- 72
++LV+ G+ + + KRRL GS F +P G+ + + +++V
Sbjct: 379 SVLVNNKSVQGSPVKINVIPKRRLMGNYSGSGSSQ--FNYPEGVLITSEGNVLVCEKSQD 436
Query: 73 ------DSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDN-SIVVADSSNHRVQVFQ 125
D SN +V VC +F+L T+P GI++ P N + V D S+H +++++
Sbjct: 437 GNYFITDGSNKQVVVCNNNFELIRCFGSEELTYPVGISISPVNGRVYVVDWSSHCIRIYK 496
Query: 126 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFV 185
DG ++ FGS G+ + + P+ I + + VIV+D NNH +Q V +G F+
Sbjct: 497 QDGGYIKSFGSRGDGDCRFKSPYGITIDSKGNVIVADKNNHCIQ-------VLTGEGEFL 549
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL 245
KFGS G GQL+ P +A V VSD+ N+ VQ +D +G+ + S G L
Sbjct: 550 FKFGSQGKSDGQLQCPLGVATDTDGYVYVSDTGNNSVQKYDSHGQFVCRIDSPGD---GL 606
Query: 246 KFPRGVAVDDQ---GYISVGDSGNNRIQIF 272
+ PRG+ V + G I V D N+ I+IF
Sbjct: 607 RVPRGICVTNDKPFGKIVVADYNNHCIKIF 636
>gi|156375354|ref|XP_001630046.1| predicted protein [Nematostella vectensis]
gi|156217059|gb|EDO37983.1| predicted protein [Nematostella vectensis]
Length = 719
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 142/280 (50%), Gaps = 27/280 (9%)
Query: 48 RGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW-----PRG 102
+G+ P F P GI V + VAD N RVQV D+ V P
Sbjct: 359 KGTSPPHFNTPVGIGVDRWGKLYVADYGNARVQV----LDIGGKTVREPLNIGGKCRPCA 414
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+AV +V+ DS H V+VF G FV + +K +A+ +++ + + D
Sbjct: 415 LAVSHRGDLVMTDS--HIVRVFNRKGEFVRPILPIYSKHDPRPDLCSLAIDDSSNIYIGD 472
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
NHR+Q F+ G+ FQ F+G + +L +P IAV+ VIVSD+ H++
Sbjct: 473 RANHRIQKFNYEGQ-FQ---FFIGS-------SEELCYPIGIAVTKHGDVIVSDNEKHQL 521
Query: 223 QIF---DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
++F D+ + G+ G + FPRG+A+D + I V DS N+RIQ+ T +GQ++
Sbjct: 522 KVFFHEDLTRP--KTIGANGIGICKFAFPRGIALDKEENILVADSQNHRIQVITIEGQYI 579
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+FG G G F VA+ ++GN+LV D +NHR+Q+F
Sbjct: 580 GSFGNVGDDPGCFNTPYDVAIDTSGNVLVADTKNHRVQIF 619
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 84/139 (60%), Gaps = 12/139 (8%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--- 96
+ QF IGS SE C +P GIAV ++V+D+ H+++V F H DL A
Sbjct: 486 QFQFFIGS--SEELC--YPIGIAVTKHGDVIVSDNEKHQLKVFF-HEDLTRPKTIGANGI 540
Query: 97 ----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
F +PRGIA+ + +I+VADS NHR+QV +G ++G FG++G+ G P+ +A+
Sbjct: 541 GICKFAFPRGIALDKEENILVADSQNHRIQVITIEGQYIGSFGNVGDDPGCFNTPYDVAI 600
Query: 153 SNTNRVIVSDSNNHRVQIF 171
+ V+V+D+ NHRVQIF
Sbjct: 601 DTSGNVLVADTKNHRVQIF 619
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 93/171 (54%), Gaps = 10/171 (5%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+A+ ++I + D +NHR+Q F +G F GS + +L +P IAV+ VIVSD
Sbjct: 460 LAIDDSSNIYIGDRANHRIQKFNYEGQFQFFIGS----SEELCYPIGIAVTKHGDVIVSD 515
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
+ H++++F F D T G+ G + P IA+ ++V+DS NHR+
Sbjct: 516 NEKHQLKVF------FHEDLTRPKTIGANGIGICKFAFPRGIALDKEENILVADSQNHRI 569
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
Q+ + G+ I SFG+ G + G P VA+D G + V D+ N+R+QIFT
Sbjct: 570 QVITIEGQYIGSFGNVGDDPGCFNTPYDVAIDTSGNVLVADTKNHRVQIFT 620
>gi|430743486|ref|YP_007202615.1| NHL repeat protein [Singulisphaera acidiphila DSM 18658]
gi|430015206|gb|AGA26920.1| NHL repeat protein [Singulisphaera acidiphila DSM 18658]
Length = 307
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 136/283 (48%), Gaps = 21/283 (7%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT------W 99
G G+ PG PR A + + +AD ++ R+Q FD + T
Sbjct: 35 GIHGTRPGWLHKPRAAAFDGKDRLYMADLTD-RIQA----FDRDGKYLLGWRTPDFNVDG 89
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS--MGNKAGQLEHPHYIAVSNTNR 157
P G+ V ++V+D+ +RV V+ G + + G G G+ +P +
Sbjct: 90 PSGLTVDRYGRLLVSDTHFYRVLVYSLQGELLFQLGDGVQGTTPGRFGYPTDAVIDRAGN 149
Query: 158 VIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
V D +N R+Q VF +G ++ ++G G G+ P +A+ + +R+ V+D
Sbjct: 150 FYVGDYGDNDRIQ-------VFSPEGKWLRQWGGHGYALGEFLKPRALAIDDQDRIYVAD 202
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
S NHR+Q+FD G+++ +G+ G GQ+ +P +A+ + V + GN+R+Q F+ +G
Sbjct: 203 SCNHRIQVFDTMGKLLFHWGTRGGAPGQMNYPYDLAIGPDHALYVCEYGNHRVQKFSLEG 262
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ L +G G G G+ +A+ G + V D NHR+Q F
Sbjct: 263 RSLGVWGSAGRGPGQLYNPFALAIDHTGAVSVIDSNNHRVQRF 305
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+L F G+RG PG +P +A+GPD+++ V + NHRVQ F L+ + + +
Sbjct: 216 KLLFHWGTRGGAPGQMNYPYDLAIGPDHALYVCEYGNHRVQ----KFSLEGRSLGVWGSA 271
Query: 100 PRG---------IAVGPDNSIVVADSSNHRVQVFQ 125
RG +A+ ++ V DS+NHRVQ F+
Sbjct: 272 GRGPGQLYNPFALAIDHTGAVSVIDSNNHRVQRFR 306
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
N R +G G+ G L PR A D + + + D +RIQ F DG++L W
Sbjct: 26 ANSRPDVVWGIHGTRPGWLHKPRAAAFDGKDRLYMADL-TDRIQAFDRDGKYLLG---WR 81
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ D G G+ V G +LV D +R+ V+
Sbjct: 82 TPDFNVDGPSGLTVDRYGRLLVSDTHFYRVLVY 114
>gi|148654423|ref|YP_001274628.1| NHL repeat-containing protein [Roseiflexus sp. RS-1]
gi|148566533|gb|ABQ88678.1| NHL repeat containing protein [Roseiflexus sp. RS-1]
Length = 1146
Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats.
Identities = 72/206 (34%), Positives = 98/206 (47%), Gaps = 27/206 (13%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG GN GQL P IA+ +IVSDS NHR+ +FD GT + GS G+
Sbjct: 834 FGEFGNAPGQLVQPRGIAIDPQGNIIVSDSANHRLIVFD-------PSGTPIRTIGSFGS 886
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG--------------SEG 239
GQ P +AV + V+D+ N R+ D G + S+G + G
Sbjct: 887 GDGQFYEPRGVAVDAQGNIYVADTWNARIVKLDPQGTFLASWGVGRDDFGDGRRASPTGG 946
Query: 240 SEEGQLKFP------RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+++ L P RGVAVD G + + D+GN RI + DG + +G GS G+F
Sbjct: 947 TQDANLARPLDLFGPRGVAVDADGNVYIADTGNKRIVVTDTDGNYRYQWGYDGSASGQFN 1006
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
GVAV NG + V D N R+Q F
Sbjct: 1007 EPTGVAVDENGTVFVADTWNSRVQAF 1032
Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats.
Identities = 85/285 (29%), Positives = 119/285 (41%), Gaps = 66/285 (23%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PRGIA+ P +I+V+DS+NHR+ VF GT + GS G+ GQ P +AV +
Sbjct: 847 PRGIAIDPQGNIIVSDSANHRLIVFDPSGTPIRTIGSFGSGDGQFYEPRGVAVDAQGNIY 906
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAG--------------QLEHPHYIA 205
V+D+ N R+ D G S G FG G +A L P +A
Sbjct: 907 VADTWNARIVKLDPQGTFLASWGVGRDDFGD-GRRASPTGGTQDANLARPLDLFGPRGVA 965
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG 265
V V ++D+ N R+ + D +G +G +GS GQ P GVAVD+ G + V D+
Sbjct: 966 VDADGNVYIADTGNKRIVVTDTDGNYRYQWGYDGSASGQFNEPTGVAVDENGTVFVADTW 1025
Query: 266 NNRIQIF------------------------TPDGQFLRAFG------------------ 283
N+R+Q F T D F+ A G
Sbjct: 1026 NSRVQAFARADNGQVSPLPYAIWRVPGWQPQTYDDPFIAAQGGRVLVSVPARNTLLLTDD 1085
Query: 284 ------CWGSGDGEFKGLE---GVAVMSNGNILVCDRENHRIQVF 319
WG + + GVA S+G++LV DR N RI F
Sbjct: 1086 SGAGLISWGGTGSDAASVNLPCGVAFASDGSVLVVDRGNVRIMRF 1130
Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 82/304 (26%), Positives = 122/304 (40%), Gaps = 83/304 (27%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH-FDLKTNCVFLA----FTWP 100
G G+ PG PRGIA+ P +I+V+DS+NHR+ V P ++T F + F P
Sbjct: 835 GEFGNAPGQLVQPRGIAIDPQGNIIVSDSANHRLIVFDPSGTPIRTIGSFGSGDGQFYEP 894
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG--------------SMGNKAGQLEH 146
RG+AV +I VAD+ N R+ GTF+ +G + G + L
Sbjct: 895 RGVAVDAQGNIYVADTWNARIVKLDPQGTFLASWGVGRDDFGDGRRASPTGGTQDANLAR 954
Query: 147 P------HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
P +AV V ++D+ N R+ + D +DG + ++G G+ +GQ
Sbjct: 955 PLDLFGPRGVAVDADGNVYIADTGNKRIVVTD-------TDGNYRYQWGYDGSASGQFNE 1007
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIF----------------------------------- 225
P +AV V V+D+ N RVQ F
Sbjct: 1008 PTGVAVDENGTVFVADTWNSRVQAFARADNGQVSPLPYAIWRVPGWQPQTYDDPFIAAQG 1067
Query: 226 ----------------DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
D +G + S+G GS+ + P GVA G + V D GN RI
Sbjct: 1068 GRVLVSVPARNTLLLTDDSGAGLISWGGTGSDAASVNLPCGVAFASDGSVLVVDRGNVRI 1127
Query: 270 QIFT 273
F+
Sbjct: 1128 MRFS 1131
Score = 38.5 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 11/142 (7%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW-- 99
+++ G GS G F P G+AV + ++ VAD+ N RVQ F D W
Sbjct: 992 RYQWGYDGSASGQFNEPTGVAVDENGTVFVADTWNSRVQA-FARADNGQVSPLPYAIWRV 1050
Query: 100 PRGIAVGPDNSIVVAD------SSNHRVQVFQSDGTFVG--KFGSMGNKAGQLEHPHYIA 151
P D+ + A S R + +D + G +G G+ A + P +A
Sbjct: 1051 PGWQPQTYDDPFIAAQGGRVLVSVPARNTLLLTDDSGAGLISWGGTGSDAASVNLPCGVA 1110
Query: 152 VSNTNRVIVSDSNNHRVQIFDV 173
++ V+V D N R+ F +
Sbjct: 1111 FASDGSVLVVDRGNVRIMRFSL 1132
>gi|296134351|ref|YP_003641598.1| NHL repeat containing protein [Thermincola potens JR]
gi|296032929|gb|ADG83697.1| NHL repeat containing protein [Thermincola potens JR]
Length = 332
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 135/279 (48%), Gaps = 22/279 (7%)
Query: 51 EPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWPRGIAV 105
+P P G+AV I +ADS+NHR+ V + K F +P G+AV
Sbjct: 64 DPKRLKRPLGVAVNSWGDIYIADSANHRLVVFDQNGRFKKTLGGPGTGEGRFYYPAGVAV 123
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG--NKAGQLEHPHYIAVSNTNRVIVSDS 163
N + VAD N RVQV DG F+ S NK G + P +A + + VSD
Sbjct: 124 S-GNKVYVADFYNQRVQVLDQDGNFLAVLPSPRDRNKLGPVIMPITVATDSKGNLYVSDL 182
Query: 164 NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN--RVIVSDSNNHR 221
+ R+ +FD G+F FG G+ G+L + + IAV + R+ +++SNN R
Sbjct: 183 SKQRILVFD-------EKGSFQYSFGKGGSGRGELSYVNGIAVDDAGKGRIYLANSNNGR 235
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD-DQGYISVGDSGNNRIQIFTPDGQFLR 280
+ ++ + G I++ S L P+G+A D D G + V D+ +RI +F +G ++
Sbjct: 236 IDVYSMKGEYISTLAGSKS----LLNPKGIAFDRDSGNLLVADTFAHRIAVFNEEGNVVQ 291
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G G F V V G + V DREN+R++V+
Sbjct: 292 TVGTRGIEPGGFNFPTAVTVDDEGRMYVADRENNRVEVY 330
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 34/253 (13%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q R + +G G+ G F +P G+AV N + VAD N RVQV L + FLA
Sbjct: 97 QNGRFKKTLGGPGTGEGRFYYPAGVAVS-GNKVYVADFYNQRVQV------LDQDGNFLA 149
Query: 97 F-------------TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
P +A ++ V+D S R+ VF G+F FG G+ G+
Sbjct: 150 VLPSPRDRNKLGPVIMPITVATDSKGNLYVSDLSKQRILVFDEKGSFQYSFGKGGSGRGE 209
Query: 144 LEHPHYIAVSNTN--RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP 201
L + + IAV + R+ +++SNN R+ ++ + G + G+K+ L +P
Sbjct: 210 LSYVNGIAVDDAGKGRIYLANSNNGRIDVYSMKGEYIST---------LAGSKS--LLNP 258
Query: 202 HYIAVS-NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
IA ++ ++V+D+ HR+ +F+ G V+ + G+ G E G FP V VDD+G +
Sbjct: 259 KGIAFDRDSGNLLVADTFAHRIAVFNEEGNVVQTVGTRGIEPGGFNFPTAVTVDDEGRMY 318
Query: 261 VGDSGNNRIQIFT 273
V D NNR++++
Sbjct: 319 VADRENNRVEVYV 331
>gi|260785700|ref|XP_002587898.1| hypothetical protein BRAFLDRAFT_87286 [Branchiostoma floridae]
gi|229273053|gb|EEN43909.1| hypothetical protein BRAFLDRAFT_87286 [Branchiostoma floridae]
Length = 851
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 148/308 (48%), Gaps = 40/308 (12%)
Query: 25 GQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--- 81
G GT S +K+R+ G G+EP F PRG+ V P N I VA+ N RVQV
Sbjct: 568 GTAGTASGSTGDRKQRV-ITFGVMGTEPRQFLDPRGVVVSPSNEIFVANRGNERVQVRST 626
Query: 82 ---CFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFG 135
HF P + + + ++ V +++H VQ + +DGT + F
Sbjct: 627 EGVYLRHFPTVVPGTGDKVMVPHDVCMDANGTLWVVGRGQTADHVVQ-YSTDGTAMAGF- 684
Query: 136 SMGNKAGQLEHPHY---IAVS-NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM 191
LE Y IAV+ TN ++V+D++ V VF+ DG+ V
Sbjct: 685 -------DLEKIGYFRGIAVNMRTNHILVTDADQGEVH-------VFRPDGSLVRTV--R 728
Query: 192 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGV 251
+AG+ P YI V ++VSD NN+ V ++D +G + FG EGS EGQL P G+
Sbjct: 729 HPRAGKT-RPRYITVDGEGNILVSDWNNNYVYMYDESGEFLFQFGGEGSGEGQLSGPSGI 787
Query: 252 AVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDR 311
D G+I V DSGN RIQIFT G+F+R +G + G+AV G ++V +
Sbjct: 788 CTDSSGHILVADSGNGRIQIFTRHGEFVRTV---STGFTPY----GLAVGPEGQLVVTNY 840
Query: 312 ENHRIQVF 319
H + V+
Sbjct: 841 WKHTVTVY 848
>gi|291235552|ref|XP_002737714.1| PREDICTED: tripartite motif-containing 3-like [Saccoglossus
kowalevskii]
Length = 639
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 148/289 (51%), Gaps = 27/289 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWP 100
L+ IG RG++PG F P G+++ N IVVAD+ N RVQ+ + K+ F ++ P
Sbjct: 367 LERTIGERGTKPGKFDLPLGMSIDQSNDIVVADNMNERVQIIDIYGRPKSQINFTGYSKP 426
Query: 101 R---GIAVGPDNSIVVADSS------NHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
+A+ DN + D + N++V V G + FG +L +P+ IA
Sbjct: 427 VRPIDVAISADNKYFITDGTWGFSVGNNQVIVCNQYGKVIKCFGR-----KELHNPYGIA 481
Query: 152 VSNTNRVI-VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
+++ N ++ V DS+ H ++++ + SD ++ G G + Q E P +IA+++
Sbjct: 482 INHNNGIVYVVDSSAHCIRLYKM------SDYEYIRSVGEEGEGSCQFEDPQFIAINSKG 535
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
+IVSD+ N R+Q+ +G + +FG +E + +P G+ D+ I + + NR+Q
Sbjct: 536 CIIVSDAGNSRIQVLTSDGVFMFAFGGYPNE--MIDWPWGITTDESDNIYICEYNYNRLQ 593
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F +G+F+ SG VA+ +G ++V D ++H ++VF
Sbjct: 594 KFNSEGKFVTNI---ASGGHVLDRPRAVAITMDGKVIVTD-DSHSVKVF 638
>gi|404496726|ref|YP_006720832.1| NHL repeat domain-containing protein [Geobacter metallireducens
GS-15]
gi|418065326|ref|ZP_12702700.1| NHL repeat-containing protein [Geobacter metallireducens RCH3]
gi|78194331|gb|ABB32098.1| NHL repeat domain lipoprotein [Geobacter metallireducens GS-15]
gi|373562504|gb|EHP88715.1| NHL repeat-containing protein [Geobacter metallireducens RCH3]
Length = 353
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 127/269 (47%), Gaps = 22/269 (8%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------AFTWPRGIAVGPDNS 110
P G+A + + VADSS VQ +DL VF P G+A + +
Sbjct: 92 PYGLASDGGSLLCVADSSTRVVQC----YDLNNREVFYIRQAGDEPLASPVGVAFDSNGN 147
Query: 111 IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
++V+DS N RV VF G ++ +FG N + P IAV+ V V D H+++
Sbjct: 148 VLVSDSINARVYVFSRQGEYLREFG---NGETTFKRPAGIAVAGNGDVYVVDVLAHKLKK 204
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
FD DG + G+F G+ L P +AV V+DS N ++ +D NG
Sbjct: 205 FD-------KDGHYRGEFPRDGS-GEPLSLPSNVAVDREGNTYVTDSMNFTIKKYDRNGN 256
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+ SFG G G PRGVAVD + ++ D+ + QIF +G+ L G G+G G
Sbjct: 257 FLRSFGEVGDAPGSFARPRGVAVDSELHVYAVDASFDNFQIFDQEGKLLLFVGKPGNGPG 316
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
EF G+ + + I V D N RIQ+F
Sbjct: 317 EFYLPSGLFIDKHDRIFVADTYNKRIQIF 345
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HF--DLKTNCVFLAFTWPRGIAVGPDN 109
F P GIAV + + V D H+++ H+ + + + P +AV +
Sbjct: 177 TFKRPAGIAVAGNGDVYVVDVLAHKLKKFDKDGHYRGEFPRDGSGEPLSLPSNVAVDREG 236
Query: 110 SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 169
+ V DS N ++ + +G F+ FG +G+ G P +AV + V D++ Q
Sbjct: 237 NTYVTDSMNFTIKKYDRNGNFLRSFGEVGDAPGSFARPRGVAVDSELHVYAVDASFDNFQ 296
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
IFD G++ FVGK GN G+ P + + +R+ V+D+ N R+QIF+
Sbjct: 297 IFDQEGKLL----LFVGK---PGNGPGEFYLPSGLFIDKHDRIFVADTYNKRIQIFE 346
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 13/89 (14%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--------- 96
G G PG F PRG+AV + + D+S Q+ FD + +
Sbjct: 262 GEVGDAPGSFARPRGVAVDSELHVYAVDASFDNFQI----FDQEGKLLLFVGKPGNGPGE 317
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
F P G+ + + I VAD+ N R+Q+F+
Sbjct: 318 FYLPSGLFIDKHDRIFVADTYNKRIQIFE 346
>gi|312095915|ref|XP_003148508.1| hypothetical protein LOAG_12948 [Loa loa]
Length = 252
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 105/193 (54%), Gaps = 17/193 (8%)
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
N IVVAD NHRVQVF G F+ KFG G G +P +AV++ N++ VSD+ NHRV
Sbjct: 1 NEIVVADKDNHRVQVFSERGDFLLKFGERGRTPGLFNYPWGVAVNSFNQIAVSDTRNHRV 60
Query: 169 QIFDVNGRVFQSDGTFVGKFG---SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
Q+F G F+ KFG S+ N L+ P + + +++++D NNHR+ +
Sbjct: 61 QMFSPQGH-------FIRKFGFDNSLYNYK-NLDSPRGVCFLHDGQLVITDFNNHRLVVM 112
Query: 226 DVNGRV-ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGC 284
G V + +GSEG EG P+G+ D++ +I V DS NNRIQ+ + DG C
Sbjct: 113 SSRGTVDMKMYGSEGDNEGSFCRPQGITTDNEEHILVCDSRNNRIQVLSLDG-----MQC 167
Query: 285 WGSGDGEFKGLEG 297
S G GL G
Sbjct: 168 VASFGGVVPGLPG 180
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 89/167 (53%), Gaps = 10/167 (5%)
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
N ++V+D +NHRVQ VF G F+ KFG G G +P +AV++ N++ VS
Sbjct: 1 NEIVVADKDNHRVQ-------VFSERGDFLLKFGERGRTPGLFNYPWGVAVNSFNQIAVS 53
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGS--EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
D+ NHRVQ+F G I FG + S L PRGV G + + D N+R+ + +
Sbjct: 54 DTRNHRVQMFSPQGHFIRKFGFDNSLYNYKNLDSPRGVCFLHDGQLVITDFNNHRLVVMS 113
Query: 274 PDGQF-LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G ++ +G G +G F +G+ + +ILVCD N+RIQV
Sbjct: 114 SRGTVDMKMYGSEGDNEGSFCRPQGITTDNEEHILVCDSRNNRIQVL 160
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 114/252 (45%), Gaps = 22/252 (8%)
Query: 32 RSQYLQKR-RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDL 88
R Q +R K G RG PG F +P G+AV N I V+D+ NHRVQ+ P HF
Sbjct: 12 RVQVFSERGDFLLKFGERGRTPGLFNYPWGVAVNSFNQIAVSDTRNHRVQMFSPQGHFIR 71
Query: 89 K---TNCV--FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGK-FGSMGNKAG 142
K N + + PRG+ D +V+ D +NHR+ V S GT K +GS G+ G
Sbjct: 72 KFGFDNSLYNYKNLDSPRGVCFLHDGQLVITDFNNHRLVVMSSRGTVDMKMYGSEGDNEG 131
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR--VFQSDGTFVGKFGSMGNKAGQLEH 200
P I N ++V DS N+R+Q+ ++G V G G G G++A
Sbjct: 132 SFCRPQGITTDNEEHILVCDSRNNRIQVLSLDGMQCVASFGGVVPGLPGDTGSRADGESA 191
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
+A + V S++ ++ S + S+ L P + V G I
Sbjct: 192 ITPLANMSAAHTTVKTSSSPQL-----------STSTNASQLSSLDRPTDLCVSPDGLIY 240
Query: 261 VGDSGNNRIQIF 272
V D G++ I+++
Sbjct: 241 VVDFGSSCIRVY 252
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 91/179 (50%), Gaps = 16/179 (8%)
Query: 67 NSIVVADSSNHRVQVCFPHFDL-----KTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRV 121
N IVVAD NHRVQV D + F +P G+AV N I V+D+ NHRV
Sbjct: 1 NEIVVADKDNHRVQVFSERGDFLLKFGERGRTPGLFNYPWGVAVNSFNQIAVSDTRNHRV 60
Query: 122 QVFQSDGTFVGKFG---SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVF 178
Q+F G F+ KFG S+ N L+ P + + +++++D NNHR+ + G V
Sbjct: 61 QMFSPQGHFIRKFGFDNSLYNYK-NLDSPRGVCFLHDGQLVITDFNNHRLVVMSSRGTV- 118
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG-RVITSFG 236
+ +GS G+ G P I N ++V DS N+R+Q+ ++G + + SFG
Sbjct: 119 -----DMKMYGSEGDNEGSFCRPQGITTDNEEHILVCDSRNNRIQVLSLDGMQCVASFG 172
>gi|260785704|ref|XP_002587900.1| hypothetical protein BRAFLDRAFT_87288 [Branchiostoma floridae]
gi|229273055|gb|EEN43911.1| hypothetical protein BRAFLDRAFT_87288 [Branchiostoma floridae]
Length = 793
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 136/283 (48%), Gaps = 31/283 (10%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ------VCFPHFDLKTNCVFLAFTW 99
G G+EPG F PRG+ V P N I VA+S RVQ V HF +
Sbjct: 530 GGIGTEPGKFHHPRGVVVSPSNEIYVAESDKRRVQIHSTEGVYLRHFPTVVPGTGDKDIY 589
Query: 100 PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
P + + + ++ V ++++H VQ + +DG + +F + + TN
Sbjct: 590 PHDVCMDGNGTLWVVGRGETADHVVQ-YSTDGNVMKRF----DLKKSILFRGITVDMRTN 644
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++VSD VQ VF+ DG+ V ++ + G + P Y+ V ++VSD
Sbjct: 645 HILVSDPYQGEVQ-------VFRPDGSLVR---TVRHPRGGMTRPRYVTVDGEGNILVSD 694
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ H V ++D +G+ + FG GS EGQL+ P G+ D G+I V D GN R+QIFT G
Sbjct: 695 WDTHCVYVYDESGKFLFQFGGRGSGEGQLRMPHGICTDSSGHILVADFGNERVQIFTRHG 754
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+F+R F+ L+G+AV G ++V N + V+
Sbjct: 755 EFVRTVRTG------FR-LDGLAVGPEGQLVVTSYWNSIVTVY 790
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 42/225 (18%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG---RVFQS---------- 180
FG +G + G+ HP + VS +N + V++S+ RVQI G R F +
Sbjct: 529 FGGIGTEPGKFHHPRGVVVSPSNEIYVAESDKRRVQIHSTEGVYLRHFPTVVPGTGDKDI 588
Query: 181 ---------DGTF-----------VGKFGSMGNKAGQLEHPHYIAVS------NTNRVIV 214
+GT V ++ + GN + + I TN ++V
Sbjct: 589 YPHDVCMDGNGTLWVVGRGETADHVVQYSTDGNVMKRFDLKKSILFRGITVDMRTNHILV 648
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
SD VQ+F +G ++ + G + PR V VD +G I V D + + ++
Sbjct: 649 SDPYQGEVQVFRPDGSLVRTV---RHPRGGMTRPRYVTVDGEGNILVSDWDTHCVYVYDE 705
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+FL FG GSG+G+ + G+ S+G+ILV D N R+Q+F
Sbjct: 706 SGKFLFQFGGRGSGEGQLRMPHGICTDSSGHILVADFGNERVQIF 750
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW--GSGD 289
+ +FG G+E G+ PRGV V I V +S R+QI + +G +LR F G+GD
Sbjct: 526 VITFGGIGTEPGKFHHPRGVVVSPSNEIYVAESDKRRVQIHSTEGVYLRHFPTVVPGTGD 585
Query: 290 GEFKGLEGVAVMSNGNILVCDR 311
+ + V + NG + V R
Sbjct: 586 KDIYPHD-VCMDGNGTLWVVGR 606
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G RGS G P GI I+VAD N RVQ+ H + V
Sbjct: 703 YDESGKFLFQFGGRGSGEGQLRMPHGICTDSSGHILVADFGNERVQIFTRHGEF-VRTVR 761
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
F G+AVGP+ +VV N V V+ S
Sbjct: 762 TGFRL-DGLAVGPEGQLVVTSYWNSIVTVYPS 792
>gi|340378860|ref|XP_003387945.1| PREDICTED: hypothetical protein LOC100632455 [Amphimedon
queenslandica]
Length = 1157
Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats.
Identities = 91/302 (30%), Positives = 132/302 (43%), Gaps = 46/302 (15%)
Query: 48 RGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------FTWP 100
+GS G F PR IA+ + VAD NHR+Q P D K F WP
Sbjct: 146 KGSTNGRFQSPRDIAIDSQGLVYVADQCNHRIQKFSP--DGKFVGQFGTEGSGPGQLDWP 203
Query: 101 RGIAVGPDNS--IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
GI + + + V+++ NHR+ VF SDG FV KFGS+G+ Q P+ +A+ +
Sbjct: 204 NGITIDTAATGLVYVSENGNHRISVFTSDGVFVRKFGSVGSDIDQFSAPYGLALDKDGLL 263
Query: 159 IVSDSN------------NHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL-------E 199
V D NH++ D V SD + + + + L E
Sbjct: 264 YVCDFKCIFMHKKWALFANHQLTSLD---EVTASDVSSTSQLLAPAKQEATLTCSVPGHE 320
Query: 200 HPHYIAVSNTNRVIVSDS-----NNHRVQIF--------DVNGRVITSFGSEGSEEGQLK 246
+ I D +H+ + + + + FGSEGS GQ K
Sbjct: 321 DSLRYYCDTCDESICRDCIMLAHKDHKYNLIANSFTKHKEALEKSLNPFGSEGSANGQFK 380
Query: 247 FPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNI 306
P G+A+D QG + V DS N IQ F+PDG+F+ FG +GSG G+ G+A+ +
Sbjct: 381 SPYGIAIDSQGLVYVADSDNCCIQKFSPDGKFVGKFGTYGSGPGQLYMPTGIAIDTAATG 440
Query: 307 LV 308
LV
Sbjct: 441 LV 442
Score = 100 bits (248), Expect = 1e-18, Method: Composition-based stats.
Identities = 81/264 (30%), Positives = 116/264 (43%), Gaps = 51/264 (19%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-- 154
F PR IA+ + VAD NHR+Q F DG FVG+FG+ G+ GQL+ P+ I +
Sbjct: 153 FQSPRDIAIDSQGLVYVADQCNHRIQKFSPDGKFVGQFGTEGSGPGQLDWPNGITIDTAA 212
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
T V VS++ NHR+ VF SDG FV KFGS+G+ Q P+ +A+ + V
Sbjct: 213 TGLVYVSENGNHRIS-------VFTSDGVFVRKFGSVGSDIDQFSAPYGLALDKDGLLYV 265
Query: 215 SDSN------------NHRVQIFD-VNGRVITSF------------------GSEGS--- 240
D NH++ D V ++S G E S
Sbjct: 266 CDFKCIFMHKKWALFANHQLTSLDEVTASDVSSTSQLLAPAKQEATLTCSVPGHEDSLRY 325
Query: 241 -----EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL 295
+E + +A D Y + +S + + L FG GS +G+FK
Sbjct: 326 YCDTCDESICRDCIMLAHKDHKYNLIANSFTKHKEALE---KSLNPFGSEGSANGQFKSP 382
Query: 296 EGVAVMSNGNILVCDRENHRIQVF 319
G+A+ S G + V D +N IQ F
Sbjct: 383 YGIAIDSQGLVYVADSDNCCIQKF 406
Score = 99.4 bits (246), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/121 (39%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
Query: 192 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGV 251
G+ G+ + P IA+ + V V+D NHR+Q F +G+ + FG+EGS GQL +P G+
Sbjct: 147 GSTNGRFQSPRDIAIDSQGLVYVADQCNHRIQKFSPDGKFVGQFGTEGSGPGQLDWPNGI 206
Query: 252 AVDD--QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+D G + V ++GN+RI +FT DG F+R FG GS +F G+A+ +G + VC
Sbjct: 207 TIDTAATGLVYVSENGNHRISVFTSDGVFVRKFGSVGSDIDQFSAPYGLALDKDGLLYVC 266
Query: 310 D 310
D
Sbjct: 267 D 267
Score = 74.3 bits (181), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
+GS G+ + PR +A+D QG + V D N+RIQ F+PDG+F+ FG GSG G+ G
Sbjct: 146 KGSTNGRFQSPRDIAIDSQGLVYVADQCNHRIQKFSPDGKFVGQFGTEGSGPGQLDWPNG 205
Query: 298 VAV--MSNGNILVCDRENHRIQVF 319
+ + + G + V + NHRI VF
Sbjct: 206 ITIDTAATGLVYVSENGNHRISVF 229
Score = 72.0 bits (175), Expect = 4e-10, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 50/267 (18%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNS--IVVADSSNHRVQVCFPHFDLKTNCVFL------ 95
+ G+ GS PG WP GI + + + V+++ NHR+ V ++ VF+
Sbjct: 189 QFGTEGSGPGQLDWPNGITIDTAATGLVYVSENGNHRISV------FTSDGVFVRKFGSV 242
Query: 96 -----AFTWPRGIAVGPDNSIVVADS------------SNHRV----QVFQSDGTFVGKF 134
F+ P G+A+ D + V D +NH++ +V SD + +
Sbjct: 243 GSDIDQFSAPYGLALDKDGLLYVCDFKCIFMHKKWALFANHQLTSLDEVTASDVSSTSQL 302
Query: 135 GSMGNKAGQL-------EHPHYIAVSNTNRVIVSDSN--NHRVQIFDVNGRVFQSDGTFV 185
+ + L E + I D H+ +++ F +
Sbjct: 303 LAPAKQEATLTCSVPGHEDSLRYYCDTCDESICRDCIMLAHKDHKYNLIANSFTKHKEAL 362
Query: 186 GK----FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSE 241
K FGS G+ GQ + P+ IA+ + V V+DS+N +Q F +G+ + FG+ GS
Sbjct: 363 EKSLNPFGSEGSANGQFKSPYGIAIDSQGLVYVADSDNCCIQKFSPDGKFVGKFGTYGSG 422
Query: 242 EGQLKFPRGVAVDD--QGYISVGDSGN 266
GQL P G+A+D G + VG+ N
Sbjct: 423 PGQLYMPTGIAIDTAATGLVYVGEEVN 449
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FGS G+ GQ + P+ IA+ + V V+DS+N +Q F DG FVGKFG+ G+
Sbjct: 369 FGSEGSANGQFKSPYGIAIDSQGLVYVADSDNCCIQ-------KFSPDGKFVGKFGTYGS 421
Query: 194 KAGQLEHPHYIAVSN--TNRVIVSDSNNH 220
GQL P IA+ T V V + N+
Sbjct: 422 GPGQLYMPTGIAIDTAATGLVYVGEEVNY 450
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-- 154
F P GIA+ + VADS N +Q F DG FVGKFG+ G+ GQL P IA+
Sbjct: 379 FKSPYGIAIDSQGLVYVADSDNCCIQKFSPDGKFVGKFGTYGSGPGQLYMPTGIAIDTAA 438
Query: 155 TNRVIVSDSNNH 166
T V V + N+
Sbjct: 439 TGLVYVGEEVNY 450
>gi|260785760|ref|XP_002587928.1| hypothetical protein BRAFLDRAFT_87316 [Branchiostoma floridae]
gi|229273083|gb|EEN43939.1| hypothetical protein BRAFLDRAFT_87316 [Branchiostoma floridae]
Length = 968
Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats.
Identities = 79/271 (29%), Positives = 121/271 (44%), Gaps = 67/271 (24%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM-GNKAGQLEHPHYIAVSN- 154
F +PRG+ V P N I VAD N RVQV ++G ++ F ++ G++ P+ + +
Sbjct: 714 FYYPRGVVVSPSNEIFVADIFNKRVQVHSTEGVYLRHFPTVVPGTGGKVMEPYDVCMDGN 773
Query: 155 --------------------------------------------TNRVIVSDSNNHRVQI 170
TN ++++D++ VQ
Sbjct: 774 GTLWVVGLGVTADLVVQYSTDGTAMAGFDLKNSSYYRGIAVDMRTNHILLTDADQSAVQ- 832
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VF+ DG+ V ++ + G + P + V ++VS H V ++D +G+
Sbjct: 833 ------VFRPDGSLVR---TVQHPLGGMVRPMCVTVDGEGNILVSAWGTHSVYVYDESGK 883
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+ FG GS EGQLK+PRG+ D GYI V D GN R+QIFT G+F+RA
Sbjct: 884 FLFQFGGHGSGEGQLKYPRGICTDSLGYIIVADYGNERVQIFTRHGEFVRAVR------- 936
Query: 291 EFKGLEG--VAVMSNGNILVCDRENHRIQVF 319
G E +AV G ++V D NH + VF
Sbjct: 937 --TGFEPECLAVGPEGQLVVSDWNNHTVTVF 965
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 28 GTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD 87
GT Y + + F+ G GS G +PRGI I+VAD N RVQ+ H +
Sbjct: 871 GTHSVYVYDESGKFLFQFGGHGSGEGQLKYPRGICTDSLGYIIVADYGNERVQIFTRHGE 930
Query: 88 LKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
V F P +AVGP+ +VV+D +NH V VF
Sbjct: 931 F-VRAVRTGFE-PECLAVGPEGQLVVSDWNNHTVTVF 965
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 80/222 (36%), Gaps = 90/222 (40%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI----------------------- 224
FG G++ G+ +P + VS +N + V+D N RVQ+
Sbjct: 704 FGGKGSEPGKFYYPRGVVVSPSNEIFVADIFNKRVQVHSTEGVYLRHFPTVVPGTGGKVM 763
Query: 225 ------FDVNGR-----------VITSFGSEGSEEGQL-----KFPRGVAVDDQ-GYISV 261
D NG ++ + ++G+ + RG+AVD + +I +
Sbjct: 764 EPYDVCMDGNGTLWVVGLGVTADLVVQYSTDGTAMAGFDLKNSSYYRGIAVDMRTNHILL 823
Query: 262 GDSGNNRIQIFTPD--------------------------------------------GQ 277
D+ + +Q+F PD G+
Sbjct: 824 TDADQSAVQVFRPDGSLVRTVQHPLGGMVRPMCVTVDGEGNILVSAWGTHSVYVYDESGK 883
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG+G+ K G+ S G I+V D N R+Q+F
Sbjct: 884 FLFQFGGHGSGEGQLKYPRGICTDSLGYIIVADYGNERVQIF 925
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ +FG +GSE G+ +PRGV V I V D N R+Q+ + +G +LR F G G
Sbjct: 701 VITFGGKGSEPGKFYYPRGVVVSPSNEIFVADIFNKRVQVHSTEGVYLRHFPTVVPGTGG 760
Query: 292 FKGLEGVAVMSNGN 305
K +E V +GN
Sbjct: 761 -KVMEPYDVCMDGN 773
>gi|260785722|ref|XP_002587909.1| hypothetical protein BRAFLDRAFT_87297 [Branchiostoma floridae]
gi|229273064|gb|EEN43920.1| hypothetical protein BRAFLDRAFT_87297 [Branchiostoma floridae]
Length = 792
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 139/286 (48%), Gaps = 37/286 (12%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTW 99
G G+EPG F PRG+ V P N I VAD N R+QV HF
Sbjct: 529 GGEGTEPGKFRLPRGVVVSPSNEIFVADYGNRRIQVHSTEGVYLRHFPTVVPGTGDKDMR 588
Query: 100 PRGIAVGPDNSIVVAD---SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY--IAVS- 153
PR + + + ++ V S++H VQ + +DGT + +F + N HY IAV
Sbjct: 589 PRDVCMDGNGTLWVVGAGGSADHVVQ-YSTDGTAMAEF-DLKNSY------HYRGIAVDM 640
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
TN ++V+D++ V VF+ DG V ++ + G++ P Y+ V ++
Sbjct: 641 RTNHILVTDADQGAVL-------VFRPDGFLVR---TVRDPRGEMTRPWYVTVDGEGNIL 690
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
VSD + V ++D +G+ + FG S EGQL P G+ D G+I V D+GN RIQIFT
Sbjct: 691 VSDWSRDSVYVYDESGKFLFQFGGWESGEGQLSNPAGICTDSSGHIIVVDTGNKRIQIFT 750
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F+R F+ EG+AV G ++V D + VF
Sbjct: 751 RHGEFVRTVRTG------FRP-EGLAVGPKGQLVVTDWYKDTVTVF 789
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 100/230 (43%), Gaps = 52/230 (22%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI----------------------- 170
FG G + G+ P + VS +N + V+D N R+Q+
Sbjct: 528 FGGEGTEPGKFRLPRGVVVSPSNEIFVADYGNRRIQVHSTEGVYLRHFPTVVPGTGDKDM 587
Query: 171 ------FDVNGRV--------------FQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 209
D NG + + +DGT + +F + N H IAV T
Sbjct: 588 RPRDVCMDGNGTLWVVGAGGSADHVVQYSTDGTAMAEF-DLKNSY----HYRGIAVDMRT 642
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
N ++V+D++ V +F +G ++ + G++ P V VD +G I V D + +
Sbjct: 643 NHILVTDADQGAVLVFRPDGFLVRTV---RDPRGEMTRPWYVTVDGEGNILVSDWSRDSV 699
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++ G+FL FG W SG+G+ G+ S+G+I+V D N RIQ+F
Sbjct: 700 YVYDESGKFLFQFGGWESGEGQLSNPAGICTDSSGHIIVVDTGNKRIQIF 749
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW--GSGD 289
+ +FG EG+E G+ + PRGV V I V D GN RIQ+ + +G +LR F G+GD
Sbjct: 525 VVTFGGEGTEPGKFRLPRGVVVSPSNEIFVADYGNRRIQVHSTEGVYLRHFPTVVPGTGD 584
Query: 290 GEFKGLEGVAVMSNGNILVC 309
+ + + V + NG + V
Sbjct: 585 KDMRPRD-VCMDGNGTLWVV 603
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 27/209 (12%)
Query: 131 VGKFGSMGNKAGQ----LEHPHYIAVSNTN-------RVIVSDSNNHRVQIFDVNGRVFQ 179
G+ +G+KAG+ E +A+ ++ ++ +++ + G V
Sbjct: 457 TGRPEDVGDKAGEDPTVKEEDKTVAMQDSGSESDGRVEILGTEAPEQERHTAGIEGAVHG 516
Query: 180 SDGTF---VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
S G V FG G + G+ P + VS +N + V+D N R+Q+ G + F
Sbjct: 517 STGEVKQGVVTFGGEGTEPGKFRLPRGVVVSPSNEIFVADYGNRRIQVHSTEGVYLRHFP 576
Query: 237 S--EGSEEGQLKFPRGVAVDDQGYISV---GDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ G+ + ++ PR V +D G + V G S ++ +Q ++ DG + F S
Sbjct: 577 TVVPGTGDKDMR-PRDVCMDGNGTLWVVGAGGSADHVVQ-YSTDGTAMAEFDLKNS---- 630
Query: 292 FKGLEGVAV-MSNGNILVCDRENHRIQVF 319
G+AV M +ILV D + + VF
Sbjct: 631 -YHYRGIAVDMRTNHILVTDADQGAVLVF 658
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G S G + P GI I+V D+ N R+Q+ H + V
Sbjct: 702 YDESGKFLFQFGGWESGEGQLSNPAGICTDSSGHIIVVDTGNKRIQIFTRHGEF-VRTVR 760
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
F P G+AVGP +VV D V VF
Sbjct: 761 TGFR-PEGLAVGPKGQLVVTDWYKDTVTVF 789
>gi|253701706|ref|YP_003022895.1| NHL repeat containing protein [Geobacter sp. M21]
gi|251776556|gb|ACT19137.1| NHL repeat containing protein [Geobacter sp. M21]
Length = 355
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 114/234 (48%), Gaps = 14/234 (5%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC-VFLAFTWPRGIAVGP 107
G E F P + PD ++ V DS+ +V F DLK + P GIA P
Sbjct: 129 GPEGEPFLSPIAVTEDPDETVYVTDSAAAKVY-RFNASDLKVEPFITTGLQRPTGIAYNP 187
Query: 108 DNSIV-VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
++ V D+ +V F G +FGS G+K GQ HP IAV + V+D N
Sbjct: 188 ATDLIYVTDTVAGQVVAFTRKGKEAFRFGSPGSKPGQFNHPTDIAVDAKGGIAVTDPLNG 247
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
R+QI F G F+ FG MGN +G P +AV ++ + V D+ VQ+F+
Sbjct: 248 RIQI-------FSGKGAFLAAFGRMGNTSGSFAKPKGVAVDSSGNLHVCDALFDTVQVFN 300
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
G ++ ++G G E G+ P G+ +D + I V D+ N+RIQ+F Q+LR
Sbjct: 301 PRGELLLNYGIRGGERGEFWMPSGLYIDGEDAIYVADTYNDRIQVF----QYLR 350
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 109/226 (48%), Gaps = 17/226 (7%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 155
F P + PD ++ V DS+ +V F + V F + G L+ P IA + T
Sbjct: 135 FLSPIAVTEDPDETVYVTDSAAAKVYRFNASDLKVEPFITTG-----LQRPTGIAYNPAT 189
Query: 156 NRVIVSDSNNHRVQIFDVNGRV--FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+ + V+D+ V G+V F G +FGS G+K GQ HP IAV +
Sbjct: 190 DLIYVTDT---------VAGQVVAFTRKGKEAFRFGSPGSKPGQFNHPTDIAVDAKGGIA 240
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
V+D N R+QIF G + +FG G+ G P+GVAVD G + V D+ + +Q+F
Sbjct: 241 VTDPLNGRIQIFSGKGAFLAAFGRMGNTSGSFAKPKGVAVDSSGNLHVCDALFDTVQVFN 300
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
P G+ L +G G GEF G+ + I V D N RIQVF
Sbjct: 301 PRGELLLNYGIRGGERGEFWMPSGLYIDGEDAIYVADTYNDRIQVF 346
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 17/148 (11%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
+ +K + F+ GS GS+PG F P IAV I V D N R+Q+ F
Sbjct: 205 FTRKGKEAFRFGSPGSKPGQFNHPTDIAVDAKGGIAVTDPLNGRIQI------FSGKGAF 258
Query: 95 LA-----------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
LA F P+G+AV ++ V D+ VQVF G + +G G + G+
Sbjct: 259 LAAFGRMGNTSGSFAKPKGVAVDSSGNLHVCDALFDTVQVFNPRGELLLNYGIRGGERGE 318
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
P + + + + V+D+ N R+Q+F
Sbjct: 319 FWMPSGLYIDGEDAIYVADTYNDRIQVF 346
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWP 100
G G+ G F P+G+AV ++ V D+ VQV P +L N F P
Sbjct: 263 GRMGNTSGSFAKPKGVAVDSSGNLHVCDALFDTVQVFNPRGELLLNYGIRGGERGEFWMP 322
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
G+ + +++I VAD+ N R+QVFQ
Sbjct: 323 SGLYIDGEDAIYVADTYNDRIQVFQ 347
>gi|340383445|ref|XP_003390228.1| PREDICTED: RING finger protein nhl-1-like [Amphimedon
queenslandica]
Length = 351
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 116/244 (47%), Gaps = 49/244 (20%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV--SN 154
F P GIA+ + VAD+ NHR+Q F SD FVG+FG+ G+ GQL P IA+ +
Sbjct: 136 FQSPCGIAIDSQGLVYVADTFNHRIQKFSSDRKFVGQFGTYGSGPGQLNKPLDIAIDTAA 195
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE--------------- 199
T V VS+ N+R+ VF SDG FV +FG G+ Q
Sbjct: 196 TGLVYVSEWGNNRIS-------VFTSDGVFVSRFGRGGSNIDQFYGLTFDKDGFFKGSAN 248
Query: 200 ----HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD 255
PH IA+ + V V+D N+R+Q F G+ ++ FG+ GS GQLK P+
Sbjct: 249 GLFISPHDIAIDSQGLVYVADYGNYRIQRFTPKGKFVSQFGTYGSGPGQLKEPK------ 302
Query: 256 QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHR 315
+FT DG F+ +FG G+ +F G+ +G + VCD N R
Sbjct: 303 ---------------VFTSDGVFVSSFGSKGNNIDQFICPSGLTFDKDGFLHVCDFNNKR 347
Query: 316 IQVF 319
+ ++
Sbjct: 348 LVIY 351
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 28/173 (16%)
Query: 142 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP 201
GQ + P IA+ + V V+D+ NHR+Q F SD FVG+FG+ G+ GQL P
Sbjct: 134 GQFQSPCGIAIDSQGLVYVADTFNHRIQ-------KFSSDRKFVGQFGTYGSGPGQLNKP 186
Query: 202 HYIAV--SNTNRVIVSDSNNHRVQIFDVNGRVITSFGS-------------------EGS 240
IA+ + T V VS+ N+R+ +F +G ++ FG +GS
Sbjct: 187 LDIAIDTAATGLVYVSEWGNNRISVFTSDGVFVSRFGRGGSNIDQFYGLTFDKDGFFKGS 246
Query: 241 EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
G P +A+D QG + V D GN RIQ FTP G+F+ FG +GSG G+ K
Sbjct: 247 ANGLFISPHDIAIDSQGLVYVADYGNYRIQRFTPKGKFVSQFGTYGSGPGQLK 299
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 205 AVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDS 264
A S T SD D VI S S GQ + P G+A+D QG + V D+
Sbjct: 96 ADSITREATCSDHGKPLEFFCDTCATVICSHCPLRSANGQFQSPCGIAIDSQGLVYVADT 155
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV--MSNGNILVCDRENHRIQVF 319
N+RIQ F+ D +F+ FG +GSG G+ +A+ + G + V + N+RI VF
Sbjct: 156 FNHRIQKFSSDRKFVGQFGTYGSGPGQLNKPLDIAIDTAATGLVYVSEWGNNRISVF 212
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 50/124 (40%), Gaps = 16/124 (12%)
Query: 48 RGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGP 107
+GS G F P IA+ + VAD N+R+Q FT P+G V
Sbjct: 244 KGSANGLFISPHDIAIDSQGLVYVADYGNYRIQ---------------RFT-PKGKFVSQ 287
Query: 108 DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 167
+ +VF SDG FV FGS GN Q P + + V D NN R
Sbjct: 288 FGTYGSGPGQLKEPKVFTSDGVFVSSFGSKGNNIDQFICPSGLTFDKDGFLHVCDFNNKR 347
Query: 168 VQIF 171
+ I+
Sbjct: 348 LVIY 351
>gi|156401400|ref|XP_001639279.1| predicted protein [Nematostella vectensis]
gi|156226406|gb|EDO47216.1| predicted protein [Nematostella vectensis]
Length = 820
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 120/238 (50%), Gaps = 15/238 (6%)
Query: 87 DLKTNCVFLAFTWPRGIAVGPDNS-IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE 145
++KT P GIAV N+ + V D H + +F G + GS G GQL
Sbjct: 549 EMKTKGSRDPLEKPWGIAVNRSNTKLAVTDCHFHYIVIFNMTGKVLMSIGSQGRGEGQLG 608
Query: 146 HPHYIAVSNTNRVIVSDSNNHRVQIFDVN-GRVFQSDGTFVGKFGSMGNKAGQLEHPHYI 204
+PH +A N + ++ +D NHR+Q+FD N GR +S FG GN G+ ++P +
Sbjct: 609 NPHGVAFLNDDVIVTADEYNHRIQLFDTNTGRCLKS-------FGHQGNGDGEFKNPLGV 661
Query: 205 AVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDS 264
V + R+I+SD N+RVQ+F G + F E G++ +P D + V D
Sbjct: 662 DVDDNGRIIISDYLNNRVQVFTSEGEYLFQFDLEV--HGEVMYPVHTRYHDNAFY-VSDF 718
Query: 265 GNNRIQIFTPDGQFL--RA-FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
N+ I +F + RA G G+ +GEF G+A S GN++VCDR NHR+ F
Sbjct: 719 RNHVIHVFDEQDDVVTRRAVIGREGNKEGEFSYPRGIAFDSVGNLIVCDRNNHRLLKF 776
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 39/296 (13%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNS-IVVADSSNHRVQVCFPHFDLKTNCVFL 95
Q+ R ++ ++GS P GIAV N+ + V D H + + F++ T V +
Sbjct: 542 QRMRYTREMKTKGSRDP-LEKPWGIAVNRSNTKLAVTDCHFHYIVI----FNM-TGKVLM 595
Query: 96 AFTW----------PRGIAVGPDNSIVVADSSNHRVQVFQSD-GTFVGKFGSMGNKAGQL 144
+ P G+A D+ IV AD NHR+Q+F ++ G + FG GN G+
Sbjct: 596 SIGSQGRGEGQLGNPHGVAFLNDDVIVTADEYNHRIQLFDTNTGRCLKSFGHQGNGDGEF 655
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYI 204
++P + V + R+I+SD N+RVQ VF S+G ++ +F + G++ +P +
Sbjct: 656 KNPLGVDVDDNGRIIISDYLNNRVQ-------VFTSEGEYLFQFDLEVH--GEVMYPVHT 706
Query: 205 AVSNTNRVIVSDSNNHRVQIFDVNGRVITS---FGSEGSEEGQLKFPRGVAVDDQGYISV 261
+ N VSD NH + +FD V+T G EG++EG+ +PRG+A D G + V
Sbjct: 707 RYHD-NAFYVSDFRNHVIHVFDEQDDVVTRRAVIGREGNKEGEFSYPRGIAFDSVGNLIV 765
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVA-VMSNGNILVCDRENHRI 316
D N+R+ FT +G+ + ++ GL A V+ +G ILV D E R+
Sbjct: 766 CDRNNHRLLKFTREGRLI-------GHTTQYLGLPIYATVLRDGKILVTDDEKKRV 814
>gi|260825313|ref|XP_002607611.1| hypothetical protein BRAFLDRAFT_207866 [Branchiostoma floridae]
gi|229292959|gb|EEN63621.1| hypothetical protein BRAFLDRAFT_207866 [Branchiostoma floridae]
Length = 219
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 9/221 (4%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGK--FGSMGNKAGQLEHPHYIAVSNTNR 157
P GI V I+VA+ + +RV +F S G F K FG G G+ +AVS N
Sbjct: 6 PEGICVDSLGRIIVANKAQNRVDMFTSRGEFTTKTTFGGRGRDPGKFGEISGVAVSPDNE 65
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
+ VSDS +RVQ+FD+NG F+ F + + + +P IAV + D
Sbjct: 66 IFVSDSQTNRVQVFDMNG-------AFLRSFTILPSDIYCIVNPADIAVDGKGNIWAVDP 118
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
+ + ++D +G +++ FG G+ +G+L P G+ VD G I V ++ NNR+ +FT G+
Sbjct: 119 SIFAIMVYDSSGVLLSKFGIWGTIQGKLWTPLGICVDPLGRIIVANNVNNRVDMFTSGGE 178
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
F+ FG G G+G+ + G+ + +G I+V + ++R+ +
Sbjct: 179 FISEFGTVGRGEGQLRTPTGICMDKSGRIIVANHGHNRVDM 219
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 109/221 (49%), Gaps = 14/221 (6%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------FTWPRGIAVGPDNS 110
P GI V I+VA+ + +RV + + T F F G+AV PDN
Sbjct: 6 PEGICVDSLGRIIVANKAQNRVDMFTSRGEFTTKTTFGGRGRDPGKFGEISGVAVSPDNE 65
Query: 111 IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
I V+DS +RVQVF +G F+ F + + + +P IAV + D + + +
Sbjct: 66 IFVSDSQTNRVQVFDMNGAFLRSFTILPSDIYCIVNPADIAVDGKGNIWAVDPSIFAIMV 125
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
+D S G + KFG G G+L P I V R+IV+++ N+RV +F G
Sbjct: 126 YD-------SSGVLLSKFGIWGTIQGKLWTPLGICVDPLGRIIVANNVNNRVDMFTSGGE 178
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
I+ FG+ G EGQL+ P G+ +D G I V + G+NR+ +
Sbjct: 179 FISEFGTVGRGEGQLRTPTGICMDKSGRIIVANHGHNRVDM 219
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 103/206 (50%), Gaps = 28/206 (13%)
Query: 30 TPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
T R ++ K G RG +PG F G+AV PDN I V+DS +RVQV FD+
Sbjct: 31 TSRGEFTTKTTF----GGRGRDPGKFGEISGVAVSPDNEIFVSDSQTNRVQV----FDM- 81
Query: 90 TNCVFL-AFTW----------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
N FL +FT P IAV +I D S + V+ S G + KFG G
Sbjct: 82 -NGAFLRSFTILPSDIYCIVNPADIAVDGKGNIWAVDPSIFAIMVYDSSGVLLSKFGIWG 140
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
G+L P I V R+IV+++ N+RV + F S G F+ +FG++G GQL
Sbjct: 141 TIQGKLWTPLGICVDPLGRIIVANNVNNRVDM-------FTSGGEFISEFGTVGRGEGQL 193
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQI 224
P I + + R+IV++ ++RV +
Sbjct: 194 RTPTGICMDKSGRIIVANHGHNRVDM 219
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 89/178 (50%), Gaps = 5/178 (2%)
Query: 142 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP 201
GQL P I V + R+IV++ +RV +F G F + TF G+ G G+
Sbjct: 1 GQLLDPEGICVDSLGRIIVANKAQNRVDMFTSRGE-FTTKTTFGGR----GRDPGKFGEI 55
Query: 202 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISV 261
+AVS N + VSDS +RVQ+FD+NG + SF S+ + P +AVD +G I
Sbjct: 56 SGVAVSPDNEIFVSDSQTNRVQVFDMNGAFLRSFTILPSDIYCIVNPADIAVDGKGNIWA 115
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D I ++ G L FG WG+ G+ G+ V G I+V + N+R+ +F
Sbjct: 116 VDPSIFAIMVYDSSGVLLSKFGIWGTIQGKLWTPLGICVDPLGRIIVANNVNNRVDMF 173
>gi|260785778|ref|XP_002587937.1| hypothetical protein BRAFLDRAFT_87325 [Branchiostoma floridae]
gi|229273092|gb|EEN43948.1| hypothetical protein BRAFLDRAFT_87325 [Branchiostoma floridae]
Length = 755
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 124/262 (47%), Gaps = 49/262 (18%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH-PHYIAVSNT 155
F +PRGI V P N I V D N RVQV ++G ++ F ++ G + P+ + + +T
Sbjct: 501 FQFPRGIVVSPSNEIFVTDMHNRRVQVHSTEGVYLRHFSTVVPGTGDKDMAPYDVCMDST 560
Query: 156 NRVIVSD---SNNHRVQI---------FDVNG--------------------------RV 177
+ + V + +H VQ FD+ V
Sbjct: 561 STLWVVGRGWTADHVVQYSTDGTAMAGFDLKKIGYSRGIAVDMRTNHILVTNADRGAVLV 620
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS 237
F+ DG+ V K + + G++ P YI V ++VSD + H V ++D +G+ + FG
Sbjct: 621 FRPDGSLVRK---VLHPRGEMTTPGYITVDGEGNILVSDWDTHCVYVYDESGKFLFQFGG 677
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
EGS EGQLKFP G+ +D G I V D GN RIQIFT G+F+R G
Sbjct: 678 EGSGEGQLKFPHGICIDSSGNIIVADRGNERIQIFTRHGEFVRTVRTGPVP-------RG 730
Query: 298 VAVMSNGNILVCDRENHRIQVF 319
+AV G ++V R+NH + VF
Sbjct: 731 LAVGPEGQLVVTGRDNHTVTVF 752
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 42/225 (18%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGS--- 190
FG G++ G+ + P I VS +N + V+D +N RVQ+ G + T V G
Sbjct: 491 FGGEGSEPGKFQFPRGIVVSPSNEIFVTDMHNRRVQVHSTEGVYLRHFSTVVPGTGDKDM 550
Query: 191 -----------------------------------MGNKAGQLEHPHYIAVS-NTNRVIV 214
G ++ + IAV TN ++V
Sbjct: 551 APYDVCMDSTSTLWVVGRGWTADHVVQYSTDGTAMAGFDLKKIGYSRGIAVDMRTNHILV 610
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
++++ V +F +G ++ G++ P + VD +G I V D + + ++
Sbjct: 611 TNADRGAVLVFRPDGSLVRKV---LHPRGEMTTPGYITVDGEGNILVSDWDTHCVYVYDE 667
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+FL FG GSG+G+ K G+ + S+GNI+V DR N RIQ+F
Sbjct: 668 SGKFLFQFGGEGSGEGQLKFPHGICIDSSGNIIVADRGNERIQIF 712
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD----LKT 90
Y + + F+ G GS G +P GI + +I+VAD N R+Q+ H + ++T
Sbjct: 665 YDESGKFLFQFGGEGSGEGQLKFPHGICIDSSGNIIVADRGNERIQIFTRHGEFVRTVRT 724
Query: 91 NCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
V PRG+AVGP+ +VV NH V VF
Sbjct: 725 GPV------PRGLAVGPEGQLVVTGRDNHTVTVF 752
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ +FG EGSE G+ +FPRG+ V I V D N R+Q+ + +G +LR F G G+
Sbjct: 488 VITFGGEGSEPGKFQFPRGIVVSPSNEIFVTDMHNRRVQVHSTEGVYLRHFSTVVPGTGD 547
>gi|126665539|ref|ZP_01736521.1| hypothetical protein MELB17_23140 [Marinobacter sp. ELB17]
gi|126630167|gb|EBA00783.1| hypothetical protein MELB17_23140 [Marinobacter sp. ELB17]
Length = 326
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 18/229 (7%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GIAV D + V+D+ N R+QVF +G F +FGS G+ G+L P + + + ++
Sbjct: 56 PTGIAV-TDTDVFVSDARNGRIQVFDHEGQFKREFGSTGDGIGELGRPMNLTIHD-EKLY 113
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V + N R+Q+F + G + G G GQ P +AV++ + V+D N
Sbjct: 114 VPEYMNDRIQVFSLAGEPLE-------LIGEPGEGPGQFNAPGGVAVADNGDLFVTDFYN 166
Query: 220 HRVQIFDVNGRVITSFGSEGSE---EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
RVQ +G + +G+ G G+ +P VA+ D G + V D NR+Q+F G
Sbjct: 167 QRVQHLRADGSFVKQWGTTGEAGKGAGEFTYPTDVALADDGTLYVADGYGNRVQVFDTKG 226
Query: 277 QFLR------AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL A G +G G F +A+ GN+ V D N RIQ F
Sbjct: 227 DFLLKWGGPFALGLYGPFKGWFTAATSIAIGPEGNVFVADFYNDRIQKF 275
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 100/189 (52%), Gaps = 12/189 (6%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
+G G+ GQL P IAV++T+ V VSD+ N R+Q+FD +G F +FGS G+
Sbjct: 43 WGEKGSGPGQLNDPTGIAVTDTD-VFVSDARNGRIQVFD-------HEGQFKREFGSTGD 94
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
G+L P + + + ++ V + N R+Q+F + G + G G GQ P GVAV
Sbjct: 95 GIGELGRPMNLTIHD-EKLYVPEYMNDRIQVFSLAGEPLELIGEPGEGPGQFNAPGGVAV 153
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGS---GDGEFKGLEGVAVMSNGNILVCD 310
D G + V D N R+Q DG F++ +G G G GEF VA+ +G + V D
Sbjct: 154 ADNGDLFVTDFYNQRVQHLRADGSFVKQWGTTGEAGKGAGEFTYPTDVALADDGTLYVAD 213
Query: 311 RENHRIQVF 319
+R+QVF
Sbjct: 214 GYGNRVQVF 222
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 135/288 (46%), Gaps = 25/288 (8%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK-----TNCVFLAFTWP 100
G +GS PG P GIAV D + V+D+ N R+QV K T P
Sbjct: 44 GEKGSGPGQLNDPTGIAV-TDTDVFVSDARNGRIQVFDHEGQFKREFGSTGDGIGELGRP 102
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
+ + D + V + N R+QVF G + G G GQ P +AV++ + V
Sbjct: 103 MNLTI-HDEKLYVPEYMNDRIQVFSLAGEPLELIGEPGEGPGQFNAPGGVAVADNGDLFV 161
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK---AGQLEHPHYIAVSNTNRVIVSDS 217
+D N RVQ ++DG+FV ++G+ G AG+ +P +A+++ + V+D
Sbjct: 162 TDFYNQRVQH-------LRADGSFVKQWGTTGEAGKGAGEFTYPTDVALADDGTLYVADG 214
Query: 218 NNHRVQIFDVNGRVITSFGSE------GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
+RVQ+FD G + +G G +G +A+ +G + V D N+RIQ
Sbjct: 215 YGNRVQVFDTKGDFLLKWGGPFALGLYGPFKGWFTAATSIAIGPEGNVFVADFYNDRIQK 274
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FT G +L AFG G G+ VA+ S+G + + ++R++ +
Sbjct: 275 FTAQGGYLTAFGSVPDNPGH-TGMA-VAIGSDGTVWSVNFADNRVEKW 320
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 85/199 (42%), Gaps = 35/199 (17%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------- 96
IG G PG F P G+AV + + V D N RVQ L+ + F+
Sbjct: 135 IGEPGEGPGQFNAPGGVAVADNGDLFVTDFYNQRVQ------HLRADGSFVKQWGTTGEA 188
Query: 97 ------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS------MGNKAGQL 144
FT+P +A+ D ++ VAD +RVQVF + G F+ K+G G G
Sbjct: 189 GKGAGEFTYPTDVALADDGTLYVADGYGNRVQVFDTKGDFLLKWGGPFALGLYGPFKGWF 248
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYI 204
IA+ V V+D N R+Q F + G ++ FGS+ + G +
Sbjct: 249 TAATSIAIGPEGNVFVADFYNDRIQ-------KFTAQGGYLTAFGSVPDNPGHTGMA--V 299
Query: 205 AVSNTNRVIVSDSNNHRVQ 223
A+ + V + ++RV+
Sbjct: 300 AIGSDGTVWSVNFADNRVE 318
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
S+G +GS GQL P G+AV D + V D+ N RIQ+F +GQF R FG G G GE
Sbjct: 42 SWGEKGSGPGQLNDPTGIAVTDTD-VFVSDARNGRIQVFDHEGQFKREFGSTGDGIGEL- 99
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G + + + V + N RIQVF
Sbjct: 100 GRPMNLTIHDEKLYVPEYMNDRIQVF 125
>gi|78045198|ref|YP_359094.1| NHL repeat-containing protein [Carboxydothermus hydrogenoformans
Z-2901]
gi|77997313|gb|ABB16212.1| NHL repeat protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 335
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 137/288 (47%), Gaps = 29/288 (10%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------- 95
F G++ F P +AV N I V D+ N RVQV FD N +F
Sbjct: 64 FLYAIYGTDQNPFKKPMAVAVS-GNRIYVTDTGNQRVQV----FDYDGNPLFTFGKPGTD 118
Query: 96 --AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F +P GIAV D + VAD N ++ VF S+G F FG+ + P + +S
Sbjct: 119 KGQFKFPYGIAVDGDGKVYVADMYNGKISVFNSEGIFQYYFGN----PSDISRPAGLFIS 174
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
NR+ V+D ++V F + DG V +FG MG G+ P+ + V+N ++
Sbjct: 175 G-NRLYVADVGKNKVTAFTL-------DGKKVLEFGKMGTANGEFRAPNCVWVAN-GKIY 225
Query: 214 VSDSNNHRVQIFDVNGRVITSF--GSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
V+DS N RVQ+F++ G + G+ E PRGV VD +G + V D+ N+R+
Sbjct: 226 VADSGNDRVQVFNLLGGYAYTLTGGNNNGETFSFINPRGVGVDGRGVLYVVDNLNSRVCG 285
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G FL FG G+ +F G+ V G I + D N R+ V+
Sbjct: 286 FDEQGNFLFTFGSKGAELNQFILPNGLFVDDQGRIYITDTVNQRVVVY 333
>gi|260830180|ref|XP_002610039.1| hypothetical protein BRAFLDRAFT_99993 [Branchiostoma floridae]
gi|229295402|gb|EEN66049.1| hypothetical protein BRAFLDRAFT_99993 [Branchiostoma floridae]
Length = 624
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 134/283 (47%), Gaps = 20/283 (7%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ----VCFPHFD-LKTNCVF 94
+ ++ +G+RG G F PRGIAV DN I+VADS N R+Q + + H + T
Sbjct: 350 KKKYMLGNRGERHGQFDHPRGIAVSTDNLILVADSHNGRIQMFDSISWKHVNSFSTTLKD 409
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
+ P +A+G + ++ V D N V+VF +DG F L P IA+
Sbjct: 410 EDLSRPTNLAIGSEGNVYVVDLENKSVKVFNNDGRHKRTFAD-----ALLVDPKSIAMCP 464
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ ++ + R N RV+ ++G V F + ++ G ++AV+ + VI+
Sbjct: 465 ASSLLYVTEFSKR------NVRVYSNEGKVVRHFPYVLSEEGPFAAVAHVAVNKSGEVII 518
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEE-GQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
SD N+ +++F +GR+ EG E G +P GV VDDQ + V D G ++ F
Sbjct: 519 SDEGNNCIKVFSSDGRLKFRIEGEGRRESGGFSWPMGVCVDDQQRLLVADRGEGKVLQFD 578
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
DG+FL+ G K G+ + S G + V D H I
Sbjct: 579 TDGKFLQYLLTRKDG---LKHPYGMDISSEGQVFVTDEGKHCI 618
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 15/188 (7%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD-VNGRVFQSDGTFVGKFGSMG 192
G+ G + GQ +HP IAVS N ++V+DS+N R+Q+FD ++ + S T +
Sbjct: 355 LGNRGERHGQFDHPRGIAVSTDNLILVADSHNGRIQMFDSISWKHVNSFSTTL------- 407
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
K L P +A+ + V V D N V++F+ +GR +F + L P+ +A
Sbjct: 408 -KDEDLSRPTNLAIGSEGNVYVVDLENKSVKVFNNDGRHKRTFA-----DALLVDPKSIA 461
Query: 253 V-DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDR 311
+ + V + +++++ +G+ +R F S +G F + VAV +G +++ D
Sbjct: 462 MCPASSLLYVTEFSKRNVRVYSNEGKVVRHFPYVLSEEGPFAAVAHVAVNKSGEVIISDE 521
Query: 312 ENHRIQVF 319
N+ I+VF
Sbjct: 522 GNNCIKVF 529
>gi|291240853|ref|XP_002740331.1| PREDICTED: tripartite motif-containing 3-like [Saccoglossus
kowalevskii]
Length = 647
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 150/290 (51%), Gaps = 28/290 (9%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+L+ IG G+ P F P G+++ IVVAD+ N RVQ+ + K+ F ++
Sbjct: 365 KLEKIIGGEGTAPEMFDVPLGVSINTCGDIVVADNRNERVQIIDIYGTQKSKLKFTGYSK 424
Query: 100 PR---GIAVGPDNSIVVADSS------NHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
P +AV DN+ + D S N++V V GK G K +L+ P I
Sbjct: 425 PVRPIDVAVSVDNTYFITDGSWVGNEGNNQVIVCNQ----YGKVMCFGGK--ELQDPCGI 478
Query: 151 AVSNTNRVI-VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
A+++ N ++ V DS+ H +++++ G F+ ++ GS G + Q E+P +IA+++
Sbjct: 479 AINHNNGIVYVVDSDAHCIRLYEKAG--FK----YIKSVGSEGQGSCQFEYPMFIAINSK 532
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
+IVSD+ N R+Q+F +G + +F G + +P G+A D I V DS N+R+
Sbjct: 533 GCIIVSDAGNGRIQVFTSDGLFMFAFS--GHPNDKFDWPCGIATDKNDNIHVCDSNNHRV 590
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
Q+F G+F+ SG G G+A+ +G ++V DR + I++F
Sbjct: 591 QLFNSKGEFITNI---ASGRRVLYGPTGIAITDDGKLVVTDRSD-CIKIF 636
>gi|260782178|ref|XP_002586168.1| hypothetical protein BRAFLDRAFT_255130 [Branchiostoma floridae]
gi|229271261|gb|EEN42179.1| hypothetical protein BRAFLDRAFT_255130 [Branchiostoma floridae]
Length = 219
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 120/228 (52%), Gaps = 27/228 (11%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS--- 153
F +PRG+ V P N I VAD +N RVQV ++G ++ F + G Q H + +
Sbjct: 11 FQFPRGVVVSPSNEIFVADKNNGRVQVHSTEGVYLRHFPTRGTVITQ----HDVCMDVDM 66
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
TN ++V+D + V+ VF+ DG+ V + G++ P YI V ++
Sbjct: 67 RTNHILVTDPDKGAVE-------VFRPDGSLVRTVRH--PRDGEMTLPRYITVDGEGNIL 117
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
VSD NN+ V ++D + + + FG GS EGQL +PRG+ D G+I V DS N R+QIFT
Sbjct: 118 VSDWNNNCVYVYDKSWKFLFKFGGGGSGEGQLHYPRGICTDSSGHILVADSDNKRVQIFT 177
Query: 274 PDGQFLRAFGCWGSGDGEFKGL--EGVAVMSNGNILVCDRENHRIQVF 319
G+F+RA G EG+AV G ++V D NH + VF
Sbjct: 178 RHGEFVRAVR---------PGFMPEGLAVGPEGQLVVTDLWNHIVTVF 216
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 117/237 (49%), Gaps = 32/237 (13%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAV 105
G G+EPG F +PRG+ V P N I VAD +N RVQV T V+L RG +
Sbjct: 2 GGEGTEPGKFQFPRGVVVSPSNEIFVADKNNGRVQVH------STEGVYLRHFPTRGTVI 55
Query: 106 GP----------DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
N I+V D V+VF+ DG+ V + G++ P YI V
Sbjct: 56 TQHDVCMDVDMRTNHILVTDPDKGAVEVFRPDGSLVRTVRH--PRDGEMTLPRYITVDGE 113
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
++VSD NN+ V ++D + + F+ KFG G+ GQL +P I ++ ++V+
Sbjct: 114 GNILVSDWNNNCVYVYDKSWK-------FLFKFGGGGSGEGQLHYPRGICTDSSGHILVA 166
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
DS+N RVQIF +G + + G + P G+AV +G + V D N+ + +F
Sbjct: 167 DSDNKRVQIFTRHGEFVRAV-----RPGFM--PEGLAVGPEGQLVVTDLWNHIVTVF 216
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 79/176 (44%), Gaps = 44/176 (25%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI----------FDVNGRVITS--- 234
FG G + G+ + P + VS +N + V+D NN RVQ+ F G VIT
Sbjct: 1 FGGEGTEPGKFQFPRGVVVSPSNEIFVADKNNGRVQVHSTEGVYLRHFPTRGTVITQHDV 60
Query: 235 -----------------------FGSEGS--------EEGQLKFPRGVAVDDQGYISVGD 263
F +GS +G++ PR + VD +G I V D
Sbjct: 61 CMDVDMRTNHILVTDPDKGAVEVFRPDGSLVRTVRHPRDGEMTLPRYITVDGEGNILVSD 120
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NN + ++ +FL FG GSG+G+ G+ S+G+ILV D +N R+Q+F
Sbjct: 121 WNNNCVYVYDKSWKFLFKFGGGGSGEGQLHYPRGICTDSSGHILVADSDNKRVQIF 176
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + FK G GS G +PRGI I+VADS N RVQ+ H + V
Sbjct: 129 YDKSWKFLFKFGGGGSGEGQLHYPRGICTDSSGHILVADSDNKRVQIFTRHGEF-VRAVR 187
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
F P G+AVGP+ +VV D NH V VF
Sbjct: 188 PGFM-PEGLAVGPEGQLVVTDLWNHIVTVF 216
>gi|219852041|ref|YP_002466473.1| NHL repeat containing protein [Methanosphaerula palustris E1-9c]
gi|219546300|gb|ACL16750.1| NHL repeat containing protein [Methanosphaerula palustris E1-9c]
Length = 930
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 108/203 (53%), Gaps = 16/203 (7%)
Query: 121 VQVFQSDG--TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVF 178
VQV ++G + ++GS G+ Q P +AV + V V+D N+R+Q F
Sbjct: 20 VQVVSAEGGYAYATQWGSSGSGDEQFSSPSGVAVDSVGNVYVADVGNNRIQ-------KF 72
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSE 238
S GTF+ K+GS G+ GQ P +AV + V V+D+ N+R+Q F G I +GS
Sbjct: 73 TSTGTFIKKWGSSGSGDGQFSSPSGVAVDSAGNVYVADTGNNRIQKFTSMGIFIKQWGSS 132
Query: 239 GSEEGQ-LKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
GS GQ P GVAVD+ G + V D+GNNRIQ FT DG F+ + E G +G
Sbjct: 133 GSGNGQFFSSPFGVAVDNAGNVYVADTGNNRIQKFTSDGAFVTNWWV-----NEPNGPDG 187
Query: 298 VAVMSNGNILVCDREN-HRIQVF 319
V V S GN+ V D R+Q F
Sbjct: 188 VTVDSAGNVYVVDVSYIDRVQKF 210
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 124/269 (46%), Gaps = 58/269 (21%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F+ P G+AV ++ VAD N+R+Q F S GTF+ K+GS G+ GQ P +AV +
Sbjct: 45 FSSPSGVAVDSVGNVYVADVGNNRIQKFTSTGTFIKKWGSSGSGDGQFSSPSGVAVDSAG 104
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ-LEHPHYIAVSNTNRVIVS 215
V V+D+ N+R+Q F S G F+ ++GS G+ GQ P +AV N V V+
Sbjct: 105 NVYVADTGNNRIQ-------KFTSMGIFIKQWGSSGSGNGQFFSSPFGVAVDNAGNVYVA 157
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD-SGNNRIQIFTP 274
D+ N+R+Q F +G +T++ + P GV VD G + V D S +R+Q FT
Sbjct: 158 DTGNNRIQKFTSDGAFVTNW-----WVNEPNGPDGVTVDSAGNVYVVDVSYIDRVQKFTS 212
Query: 275 DGQFLRAFGC-------------------------------------------WGS-GDG 290
G F+ FG WG+ G G
Sbjct: 213 SGTFIAKFGSDYIHDSAMSYHTSVAVDNAGNVYFRGPVSGIQKFSSTGAPITKWGNYGSG 272
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ G VAV S GN+ V D +N +I F
Sbjct: 273 MYYGPGDVAVDSTGNVYVSDTQNAQIVKF 301
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 117/259 (45%), Gaps = 48/259 (18%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
K GS GS G F+ P G+AV ++ VAD+ N+R+Q + +F+
Sbjct: 81 KWGSSGSGDGQFSSPSGVAVDSAGNVYVADTGNNRIQ------KFTSMGIFIKQWGSSGS 134
Query: 97 -----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
F+ P G+AV ++ VAD+ N+R+Q F SDG FV + + P +
Sbjct: 135 GNGQFFSSPFGVAVDNAGNVYVADTGNNRIQKFTSDGAFVTNW-----WVNEPNGPDGVT 189
Query: 152 VSNTNRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
V + V V D S RVQ F S GTF+ KFGS ++ H A+S
Sbjct: 190 VDSAGNVYVVDVSYIDRVQ-------KFTSSGTFIAKFGS--------DYIHDSAMSYHT 234
Query: 211 RVIVSDSNN-------HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
V V ++ N +Q F G IT +G+ GS G P VAVD G + V D
Sbjct: 235 SVAVDNAGNVYFRGPVSGIQKFSSTGAPITKWGNYGS--GMYYGPGDVAVDSTGNVYVSD 292
Query: 264 SGNNRIQIFTPDGQFLRAF 282
+ N +I FTPD + F
Sbjct: 293 TQNAQIVKFTPDIPLIPGF 311
>gi|291234992|ref|XP_002737430.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 680
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 141/284 (49%), Gaps = 24/284 (8%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIA 104
IG GS G + P G+ + D IV A+ N R+Q+ + K N + P G+
Sbjct: 410 IGKNGSGKGEYIVPIGVTMDKDGDIVTAERGNKRLQITDKDGNYK-NITKIKKCIPSGLC 468
Query: 105 VGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDS 163
+ D + D +N +V + +G + +F ++HP I V + V VSD
Sbjct: 469 IFKD-KYYMTDFTNKQVVISDMNGHVIKRFSE------NMKHPQRIVVRPADGMVYVSDW 521
Query: 164 NNHRVQIFDVNG---RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+ V+ + +G R + +DG ++ FG G+ GQ + P Y+A N + V D NN+
Sbjct: 522 DGLVVEKTNKDGHWIRKYTADGDYIKSFGGYGSNPGQFKGPFYMAFDNHGLLFVGDVNNN 581
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+Q+F+++ + SF G E+GQ+ P G+A+D +GY+ V + NN++Q F G+F+
Sbjct: 582 RIQVFNIDDEYMYSFKCSGQEDGQIYAPSGIAIDKEGYVYVANL-NNKLQKFDRSGRFIC 640
Query: 281 AFGCWGSGDGEFKGL---EGVAVMSN--GNILVCDRENHRIQVF 319
D GL GVAV + ++V D +NH +++F
Sbjct: 641 RI------DKNTDGLNIPNGVAVTDDVPCRVVVADYDNHCVKIF 678
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 18/181 (9%)
Query: 152 VSNTNRVIVSDSNNHRVQIFD---VNGRVFQSDGTFVGKFGSMGNKA-------GQLEHP 201
+S+T ++V+ +N Q+ V RV + DG+ N G+++
Sbjct: 322 LSDTATIMVTTRDNQGKQVIPRQVVEARVTKPDGSSEDIKVQDNNDGTHTVMVHGEIDGK 381
Query: 202 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISV 261
+ ++V+ NR I QI + G ++ + G GS +G+ P GV +D G I
Sbjct: 382 YKVSVTIDNRPIPGTP----AQINVIKG-LVKTIGKNGSGKGEYIVPIGVTMDKDGDIVT 436
Query: 262 GDSGNNRIQIFTPDGQF---LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
+ GN R+QI DG + + C SG FK + +N +++ D H I+
Sbjct: 437 AERGNKRLQITDKDGNYKNITKIKKCIPSGLCIFKDKYYMTDFTNKQVVISDMNGHVIKR 496
Query: 319 F 319
F
Sbjct: 497 F 497
>gi|354559653|ref|ZP_08978899.1| NHL repeat containing protein [Desulfitobacterium metallireducens
DSM 15288]
gi|353540959|gb|EHC10430.1| NHL repeat containing protein [Desulfitobacterium metallireducens
DSM 15288]
Length = 319
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 145/302 (48%), Gaps = 35/302 (11%)
Query: 29 TTPRSQYLQKRRL--QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHF 86
T +QYL + F+ G P +AV + +I ++D++N R+QV F
Sbjct: 41 TKTATQYLPIGSIIPTFQANIYGDLSAPLNKPMAVAVS-NRTIYISDTNNQRIQV----F 95
Query: 87 DLKTNCVFL---------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
D + + + F +P GIA + +AD N + +F DG F+ FG
Sbjct: 96 DYEGKPISMFGEPGEGEGQFRFPYGIASDAQGQLYIADLYNGNISIFSPDGQFIKYFG-- 153
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
+ G+ + P +A+ + +++ VSD + +++F + DGT + FG G G+
Sbjct: 154 --EKGEFKGPGGLAI-DGDKLYVSDVQSSEIKVFSL-------DGTKLLSFGKKGAGDGE 203
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
L P+ + V N++ VSD+ N R+Q+FD G + S L PRG++VD QG
Sbjct: 204 LNSPNAL-VHAGNKIYVSDTGNDRIQVFDEQGNFLLKASS------LLSNPRGISVDPQG 256
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V + N++ +F P+G+ L G GS DG+F+ G+ + G + + D N R
Sbjct: 257 NIYVVSNLTNKVVVFKPNGEKLTTIGQMGSDDGQFRFPNGLTRDNQGRLYITDVGNTRTA 316
Query: 318 VF 319
+F
Sbjct: 317 IF 318
>gi|260785772|ref|XP_002587934.1| hypothetical protein BRAFLDRAFT_87322 [Branchiostoma floridae]
gi|229273089|gb|EEN43945.1| hypothetical protein BRAFLDRAFT_87322 [Branchiostoma floridae]
Length = 818
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 144/287 (50%), Gaps = 41/287 (14%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ------VCFPHFDLKTNCVFLAFTW 99
G +GSEPG F++P G+ V P N I VAD N RVQ V HF +
Sbjct: 557 GGKGSEPGKFSYPCGVLVSPSNDIFVADIDNRRVQVHSTEGVYLRHFPTVVPGTGDKVMY 616
Query: 100 PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY---IAVS 153
P + + + ++ V +++ H VQ + +DGT + F L++ Y IAV
Sbjct: 617 PYDVCMDGNGTLWVVGRGETAEHVVQ-YSTDGTAMAGF--------DLKNSSYYRGIAVD 667
Query: 154 -NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
TN ++V+D + VQ VF+ DG+ V ++ + G++ PHY+ + +
Sbjct: 668 MRTNHILVTDRDQGEVQ-------VFRPDGSLV---RTVRHPLGEMTCPHYVTLDGEGNI 717
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+VSD ++ V ++D +G+++ FG GS G++ P G+ D G+I V DS N RIQIF
Sbjct: 718 LVSDWRSNYVYVYDESGKILFQFGGLGS--GKVSGPAGICTDSSGHILVADSVNERIQIF 775
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
T G+F+R FK EG+AV G ++V N+ + VF
Sbjct: 776 TRHGRFVRTVRTG------FKP-EGLAVGPEGQLVVTSWFNNSVTVF 815
>gi|307200358|gb|EFN80610.1| RING finger protein nhl-1 [Harpegnathos saltator]
Length = 605
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 124/239 (51%), Gaps = 31/239 (12%)
Query: 100 PRGIAVGPDN-SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNR 157
P+G+A +N I V D H + VF G + S G QL P I N
Sbjct: 379 PQGVAFLQENDEIYVTDKWKHCIFVFNHKGKLARRMCSKGQGESQLRSPEGITFYLERNV 438
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN------- 210
V+D+ N R+QI + DG+++G G +G + + + + NTN
Sbjct: 439 FYVADTGNDRIQIL-------KKDGSYLGSIGPIGKRTR-----NTVRLRNTNPGPSHLN 486
Query: 211 ----------RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
RV+V+DS +H+V+IFD NG+++ + G G+ +G K P + +D +G I
Sbjct: 487 QPTDVAVTATRVVVADSGSHKVKIFDHNGQILQTIGGVGTSKGLFKSPEVLRIDKKGNII 546
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
VGD+GN R+QIF+P+G+FLR G G+ + +F + GV V ++ +I V D +N+ I +F
Sbjct: 547 VGDAGNGRVQIFSPEGEFLRVLGSKGTKERQFGWVSGVLVTNDYDIFVADSKNNVIYLF 605
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P + + +I+V D+ N RVQ+F +G F+ GS G K Q + V+N
Sbjct: 531 FKSPEVLRIDKKGNIIVGDAGNGRVQIFSPEGEFLRVLGSKGTKERQFGWVSGVLVTNDY 590
Query: 157 RVIVSDSNNHRVQIF 171
+ V+DS N+ + +F
Sbjct: 591 DIFVADSKNNVIYLF 605
>gi|260817547|ref|XP_002603647.1| hypothetical protein BRAFLDRAFT_235607 [Branchiostoma floridae]
gi|229288969|gb|EEN59658.1| hypothetical protein BRAFLDRAFT_235607 [Branchiostoma floridae]
Length = 219
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 120/225 (53%), Gaps = 25/225 (11%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F++P G+AV I V D+ N+RVQVF +G F KFG++G + G+ P I V+
Sbjct: 9 FSFPIGVAVDSYGGIFVTDTGNNRVQVFDGEGHFKFKFGTIGGRDGEFLRPSAIVVTPAG 68
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++V D + ++Q+FD S+G FV +FG L P +A+++ ++ +
Sbjct: 69 DIVVKD--DKKIQVFD-------SEGRFVRRFGD-----NVLRAPFGLALTSQGHLVTVN 114
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRG---VAVDDQGYISVGDSGNNRIQIFT 273
+ + G+++T FG+ G+ G+ FP G +AV Q I V D GNN + + T
Sbjct: 115 APS-------TTGQLVTRFGNRGTRTGEFSFPIGLRFLAVSQQNLI-VSDLGNNTVYVTT 166
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
DG+ + FG G GDG GVAV +GNI+V D N R+QV
Sbjct: 167 LDGKSVLQFGSRGIGDGLLSEPAGVAVDWSGNIIVADSRNCRVQV 211
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 117/233 (50%), Gaps = 30/233 (12%)
Query: 47 SRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC--FPHFDLKTNCVF---LAFTWPR 101
+RG+ G F++P G+AV I V D+ N+RVQV HF K + F P
Sbjct: 1 NRGTRTGEFSFPIGVAVDSYGGIFVTDTGNNRVQVFDGEGHFKFKFGTIGGRDGEFLRPS 60
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
I V P IVV D + ++QVF S+G FV +FG L P +A+++ ++
Sbjct: 61 AIVVTPAGDIVVKD--DKKIQVFDSEGRFVRRFGD-----NVLRAPFGLALTSQGHLVTV 113
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP---HYIAVSNTNRVIVSDSN 218
++ + + G V +FG+ G + G+ P ++AVS N +IVSD
Sbjct: 114 NAPS--------------TTGQLVTRFGNRGTRTGEFSFPIGLRFLAVSQQN-LIVSDLG 158
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
N+ V + ++G+ + FGS G +G L P GVAVD G I V DS N R+Q+
Sbjct: 159 NNTVYVTTLDGKSVLQFGSRGIGDGLLSEPAGVAVDWSGNIIVADSRNCRVQV 211
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 89/191 (46%), Gaps = 28/191 (14%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----A 96
+FK G+ G G F P I V P IVV D + ++QV FD + V
Sbjct: 42 FKFKFGTIGGRDGEFLRPSAIVVTPAGDIVVKD--DKKIQV----FDSEGRFVRRFGDNV 95
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHP---HYIAVS 153
P G+A+ +V ++ + + G V +FG+ G + G+ P ++AVS
Sbjct: 96 LRAPFGLALTSQGHLVTVNAPS-------TTGQLVTRFGNRGTRTGEFSFPIGLRFLAVS 148
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
N +IVSD N+ V + + DG V +FGS G G L P +AV + +I
Sbjct: 149 QQN-LIVSDLGNNTVYVTTL-------DGKSVLQFGSRGIGDGLLSEPAGVAVDWSGNII 200
Query: 214 VSDSNNHRVQI 224
V+DS N RVQ+
Sbjct: 201 VADSRNCRVQV 211
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+ G+ G+ FP GVAVD G I V D+GNNR+Q+F +G F FG G DGEF
Sbjct: 1 NRGTRTGEFSFPIGVAVDSYGGIFVTDTGNNRVQVFDGEGHFKFKFGTIGGRDGEFLRPS 60
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
+ V G+I+V +++ +IQVF
Sbjct: 61 AIVVTPAGDIVV--KDDKKIQVF 81
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 7/119 (5%)
Query: 192 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGV 251
G + G+ P +AV + + V+D+ N+RVQ+FD G FG+ G +G+ P +
Sbjct: 3 GTRTGEFSFPIGVAVDSYGGIFVTDTGNNRVQVFDGEGHFKFKFGTIGGRDGEFLRPSAI 62
Query: 252 AVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
V G I V D + +IQ+F +G+F+R F GD + G+A+ S G+++ +
Sbjct: 63 VVTPAGDIVVKD--DKKIQVFDSEGRFVRRF-----GDNVLRAPFGLALTSQGHLVTVN 114
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 17 QTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSN 76
Q L+VS +G T + K LQF GSRG G + P G+AV +I+VADS N
Sbjct: 150 QNLIVSDLGN-NTVYVTTLDGKSVLQF--GSRGIGDGLLSEPAGVAVDWSGNIIVADSRN 206
Query: 77 HRVQVCFPHF 86
RVQVC F
Sbjct: 207 CRVQVCMESF 216
>gi|260796043|ref|XP_002593014.1| hypothetical protein BRAFLDRAFT_202178 [Branchiostoma floridae]
gi|229278238|gb|EEN49025.1| hypothetical protein BRAFLDRAFT_202178 [Branchiostoma floridae]
Length = 250
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 122/226 (53%), Gaps = 14/226 (6%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PR I +IVVAD N RV++F S G + G + + GQ+ H +A++ +V+
Sbjct: 27 PRNICHDNAGNIVVADWGNRRVEMFTSKGEHMRHVG-IRDGMGQV---HGVAIAPDGKVV 82
Query: 160 VSDSNNHRVQIF----DVNGRVFQ--SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
V+D NH V I DV+ + + S GT + KFG G+ G+ P + VS N +
Sbjct: 83 VTDWVNHEVTILPNDEDVSYPIREKTSTGTSLIKFGGRGSGPGKFITPRGVLVSYDNEIF 142
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
V+D N RVQ+FD+ G FGS G+ +GQ+K PR + D+ G I V D GN RI++F
Sbjct: 143 VTDMGNKRVQVFDMEGVFRRDFGSPGTGDGQMKHPRNICHDNTGNIVVADWGNRRIEMFN 202
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
P+G+ + G G GE + G+AV +G +++ D N + +
Sbjct: 203 PEGKHMHHVGI-KDGMGE---VHGIAVAPDGKVVLSDWVNDTVTIL 244
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 27/253 (10%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD-LKTNCV 93
Y ++ +LQ G G+ G PR I +IVVAD N RV++ + ++ +
Sbjct: 4 YDKEGKLQNSFGIPGTGDGQMKAPRNICHDNAGNIVVADWGNRRVEMFTSKGEHMRHVGI 63
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSD-------------GTFVGKFGSMGNK 140
G+A+ PD +VV D NH V + +D GT + KFG G+
Sbjct: 64 RDGMGQVHGVAIAPDGKVVVTDWVNHEVTILPNDEDVSYPIREKTSTGTSLIKFGGRGSG 123
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
G+ P + VS N + V+D N RVQ+FD+ G VF+ D FGS G GQ++H
Sbjct: 124 PGKFITPRGVLVSYDNEIFVTDMGNKRVQVFDMEG-VFRRD------FGSPGTGDGQMKH 176
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG-SEGSEEGQLKFPRGVAVDDQGYI 259
P I NT ++V+D N R+++F+ G+ + G +G E G+AV G +
Sbjct: 177 PRNICHDNTGNIVVADWGNRRIEMFNPEGKHMHHVGIKDGMGE-----VHGIAVAPDGKV 231
Query: 260 SVGDSGNNRIQIF 272
+ D N+ + I
Sbjct: 232 VLSDWVNDTVTIL 244
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 121 VQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQS 180
V V+ +G FG G GQ++ P I N ++V+D N RV++F G +
Sbjct: 1 VHVYDKEGKLQNSFGIPGTGDGQMKAPRNICHDNAGNIVVADWGNRRVEMFTSKGEHMRH 60
Query: 181 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF----DVN-------- 228
G G GQ+ H +A++ +V+V+D NH V I DV+
Sbjct: 61 VGIRDG--------MGQV---HGVAIAPDGKVVVTDWVNHEVTILPNDEDVSYPIREKTS 109
Query: 229 -GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGS 287
G + FG GS G+ PRGV V I V D GN R+Q+F +G F R FG G+
Sbjct: 110 TGTSLIKFGGRGSGPGKFITPRGVLVSYDNEIFVTDMGNKRVQVFDMEGVFRRDFGSPGT 169
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GDG+ K + + GNI+V D N RI++F
Sbjct: 170 GDGQMKHPRNICHDNTGNIVVADWGNRRIEMF 201
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP------HFDLKTNCVFLAFTW 99
GS G+ G PR I +IVVAD N R+++ P H +K +
Sbjct: 165 GSPGTGDGQMKHPRNICHDNTGNIVVADWGNRRIEMFNPEGKHMHHVGIKDGMGEV---- 220
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQS 126
GIAV PD +V++D N V + Q+
Sbjct: 221 -HGIAVAPDGKVVLSDWVNDTVTILQN 246
>gi|449132361|ref|ZP_21768462.1| NHL repeat containing protein [Rhodopirellula europaea 6C]
gi|448888402|gb|EMB18721.1| NHL repeat containing protein [Rhodopirellula europaea 6C]
Length = 332
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 143/291 (49%), Gaps = 33/291 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW------ 99
G RG G F PR +A+ PD+ + + D++ R+QV FD + TW
Sbjct: 54 GRRGFSDGRFLKPRAMAIDPDDQLYIVDTTG-RIQV----FDADGQHLR---TWTTPETN 105
Query: 100 ---PRGIAV-GPDNSIVVADSSNHRVQVFQSDGTFVGKF---GSMGNKAGQLEHPHYIAV 152
P G+ G + ++VAD+ +R+ F G + + G+ G+ AG+ IAV
Sbjct: 106 NGRPTGMVFDGAKDRLLVADTHYYRMLAFTPTGELLPEDQIGGTSGSGAGEFAFVTDIAV 165
Query: 153 SNTNRVIVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
+ + + + R+Q FD DGTF+ ++G G + P + + +
Sbjct: 166 DGDGCLYIGEYGASDRIQRFD-------PDGTFMAQWGGTGREVQHFVRPQSLVI-HEQT 217
Query: 212 VIVSDSNNHRVQIFDVNG---RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
+ ++D+ NHRVQ +D++ + I S+G EG + G+ +P G+AVD G + V + GN R
Sbjct: 218 LWIADACNHRVQRYDISTTEPQWIGSWGQEGKQLGEFYYPYGIAVDPDGTVLVCEFGNQR 277
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+Q TP+G+ + ++G G G+ G+ V S + V D NHR+Q F
Sbjct: 278 VQRLTPEGEPISSWGAPGHDPGQLYEPWGLVVDSQRRVHVLDSNNHRVQRF 328
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 113/222 (50%), Gaps = 14/222 (6%)
Query: 64 GPDNSIVVADSSNHRVQVCFPHFDL--------KTNCVFLAFTWPRGIAVGPDNSIVVAD 115
G + ++VAD+ +R+ P +L + F + IAV D + + +
Sbjct: 116 GAKDRLLVADTHYYRMLAFTPTGELLPEDQIGGTSGSGAGEFAFVTDIAVDGDGCLYIGE 175
Query: 116 -SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 174
++ R+Q F DGTF+ ++G G + P + + + + ++D+ NHRVQ +D++
Sbjct: 176 YGASDRIQRFDPDGTFMAQWGGTGREVQHFVRPQSLVI-HEQTLWIADACNHRVQRYDIS 234
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
++ ++G +G G + G+ +P+ IAV V+V + N RVQ G I+S
Sbjct: 235 ----TTEPQWIGSWGQEGKQLGEFYYPYGIAVDPDGTVLVCEFGNQRVQRLTPEGEPISS 290
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+G+ G + GQL P G+ VD Q + V DS N+R+Q FT G
Sbjct: 291 WGAPGHDPGQLYEPWGLVVDSQRRVHVLDSNNHRVQRFTLPG 332
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
+G G +G+ PR +A+D + + D+ RIQ+F DGQ LR + + +G G
Sbjct: 53 WGRRGFSDGRFLKPRAMAIDPDDQLYIVDT-TGRIQVFDADGQHLRTWTTPETNNGRPTG 111
Query: 295 LEGVAVMSNGNILVCDRENHRIQVF 319
+ V + +LV D +R+ F
Sbjct: 112 M--VFDGAKDRLLVADTHYYRMLAF 134
>gi|326321762|gb|ADZ53881.1| tripartite motif-containing protein 71 [Kogia sima]
Length = 250
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 52 VVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI--- 96
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R+
Sbjct: 97 -ENSPFKVVVKSGRSYVGIGLPGLTFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRI 155
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT DGQFL F
Sbjct: 156 QVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFDGQFLLKF 215
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
G G+ +G+F VAV S G ILV D NHRIQ
Sbjct: 216 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQ 250
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 81/124 (65%), Gaps = 7/124 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G++V + IVVAD SN+R+QVF+ G F KFG++G++ GQ + P +A + R++
Sbjct: 134 PWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIV 193
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+QIF DG F+ KFG G K GQ +P +AV++ +++VSD+ N
Sbjct: 194 VADKDNHRIQIFTF-------DGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRN 246
Query: 220 HRVQ 223
HR+Q
Sbjct: 247 HRIQ 250
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 119 LTFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 178
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F DG F+ KFG G K GQ +P +AV++ +
Sbjct: 179 DRPAGVACDASRRIVVADKDNHRIQIFTFDGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 238
Query: 158 VIVSDSNNHRVQ 169
++VSD+ NHR+Q
Sbjct: 239 ILVSDTRNHRIQ 250
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 17/148 (11%)
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT----- 233
Q +GT+V + QLE H ++V+ N+ I N ++ +GR
Sbjct: 68 QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI----ENSPFKVVVKSGRSYVGIGLP 117
Query: 234 --SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+FGSEG +G+L P GV+VD +GYI V D NNRIQ+F P G F FG GS G+
Sbjct: 118 GLTFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQ 177
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F GVA ++ I+V D++NHRIQ+F
Sbjct: 178 FDRPAGVACDASRRIVVADKDNHRIQIF 205
>gi|260785734|ref|XP_002587915.1| hypothetical protein BRAFLDRAFT_87303 [Branchiostoma floridae]
gi|229273070|gb|EEN43926.1| hypothetical protein BRAFLDRAFT_87303 [Branchiostoma floridae]
Length = 965
Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats.
Identities = 73/240 (30%), Positives = 111/240 (46%), Gaps = 42/240 (17%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F++PRG+ V P N I V D N RVQV ++G ++ F + G+ PH + +
Sbjct: 712 FSYPRGVVVSPSNEIFVVDRLNRRVQVHSTEGVYLRHFPTAVPGTGKDMQPHDVCMDGNG 771
Query: 157 RVIV---SDSNNHRVQI---------FDVNG---------------------------RV 177
+ V ++ +H VQ FD+ V
Sbjct: 772 TLWVVGRGETAHHVVQYSTDGTAMAGFDLKKSHDYPRGIAVDMRTNHILVTDPDQGEVHV 831
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS 237
F+ DG+ V ++ + G++ HP Y+ V ++VSD + H V ++D +G+ + FG
Sbjct: 832 FRPDGSLVR---TVRHPRGEMVHPRYVTVDGEGNILVSDWDTHYVYVYDESGKFLFQFGG 888
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
EGS EGQL +PRG+ D G I V D N R+QIFT G+F+R +G G EG
Sbjct: 889 EGSGEGQLDYPRGIRTDSSGLILVADFWNERVQIFTRHGEFVRTVRTGFGPEGLAVGPEG 948
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 50/229 (21%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI----------------------- 170
FG G+K G+ +P + VS +N + V D N RVQ+
Sbjct: 702 FGGEGSKPGKFSYPRGVVVSPSNEIFVVDRLNRRVQVHSTEGVYLRHFPTAVPGTGKDMQ 761
Query: 171 -----FDVNGRV--------------FQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTN 210
D NG + + +DGT + F + ++P IAV TN
Sbjct: 762 PHDVCMDGNGTLWVVGRGETAHHVVQYSTDGTAMAGF----DLKKSHDYPRGIAVDMRTN 817
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
++V+D + V +F +G ++ + G++ PR V VD +G I V D + +
Sbjct: 818 HILVTDPDQGEVHVFRPDGSLVRTV---RHPRGEMVHPRYVTVDGEGNILVSDWDTHYVY 874
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++ G+FL FG GSG+G+ G+ S+G ILV D N R+Q+F
Sbjct: 875 VYDESGKFLFQFGGEGSGEGQLDYPRGIRTDSSGLILVADFWNERVQIF 923
Score = 43.5 bits (101), Expect = 0.13, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G GS G +PRGI I+VAD N RVQ+ H + V
Sbjct: 876 YDESGKFLFQFGGEGSGEGQLDYPRGIRTDSSGLILVADFWNERVQIFTRHGEF-VRTVR 934
Query: 95 LAFTWPRGIAVGPDNSI 111
F P G+AVGP+ +
Sbjct: 935 TGFG-PEGLAVGPEGQL 950
>gi|260785698|ref|XP_002587897.1| hypothetical protein BRAFLDRAFT_87285 [Branchiostoma floridae]
gi|229273052|gb|EEN43908.1| hypothetical protein BRAFLDRAFT_87285 [Branchiostoma floridae]
Length = 1220
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 139/285 (48%), Gaps = 27/285 (9%)
Query: 29 TTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ------VC 82
++P ++R + F G GS P F +PRG+ V P+N I VAD N RVQ V
Sbjct: 581 SSPSGDSRKQRVITF--GRTGSVPEEFQYPRGVVVSPNNDIFVADYGNSRVQVYSTKGVY 638
Query: 83 FPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVAD---SSNHRVQVFQSDGTFVGKFGSMGN 139
HF P + + + ++ V S++H VQ + +DGT + +F N
Sbjct: 639 IRHFPTVVPGTEDKDMRPHDVCMDANGTLWVVGRGWSADHVVQ-YSTDGTAMARFDLRRN 697
Query: 140 KAGQLEHPHYIAVS-NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
H IA++ + R++V++++ VQ VF+ DG+ + + G++
Sbjct: 698 -----HHLRGIAINMSAKRILVTEADQGAVQ-------VFRPDGSMERRV--RHPQTGEM 743
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
P YIAV + ++VS N+ V ++D +G + FG S EGQLK P G+ D G+
Sbjct: 744 RFPEYIAVDDDGNILVSAWNSDFVYLYDESGNFLFKFGGMRSSEGQLKRPFGICTDSSGH 803
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
I V DSGN R+QIFT G+F+R G EG V+SN
Sbjct: 804 IIVADSGNKRVQIFTRLGEFVRTVSTGSEPACLAMGPEGQLVVSN 848
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 138/279 (49%), Gaps = 38/279 (13%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTW 99
G ++PG + +PRG+ V P N I V D +N RVQV HF
Sbjct: 918 GGEETQPGEYWYPRGVVVSPSNDIFVTDHNNRRVQVHSTEGVYLRHFPTVVPGTGDNTIQ 977
Query: 100 PRGIAVGPDNSIVVAD---SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY---IAVS 153
PR + + + ++ V S++H VQ + ++GT + +F L+ H+ IAV+
Sbjct: 978 PRDVCMAGNGTLWVVGEGGSADHVVQ-YSTNGTAMARF--------DLKKSHHFRGIAVN 1028
Query: 154 -NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
T+ V+++D++ V VF+ DG+ V + AG+++ P YI V +
Sbjct: 1029 VRTSHVLITDADQGEVL-------VFRPDGSLVRTVRY--SLAGEIKRPRYITVDGEGNI 1079
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+VSD N++ V ++D +G+ FG GS EGQL PRG+ + G+I V DS N R+QIF
Sbjct: 1080 LVSDYNSNSVYVYDESGKFPFQFGGLGSGEGQLNGPRGICTNRLGHIIVADSRNKRVQIF 1139
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDR 311
T G+++R D E +AV G ++V R
Sbjct: 1140 TRHGEYVRT-------DSTGFEPEYLAVGPEGQLVVTSR 1171
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 120/237 (50%), Gaps = 22/237 (9%)
Query: 89 KTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM--GNKAGQLEH 146
+T V F +PRG+ V P+N I VAD N RVQV+ + G ++ F ++ G + +
Sbjct: 597 RTGSVPEEFQYPRGVVVSPNNDIFVADYGNSRVQVYSTKGVYIRHFPTVVPGTEDKDM-R 655
Query: 147 PHYIAVSNTNRVIVSD---SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
PH + + + V S +H VQ + +DGT + +F N H
Sbjct: 656 PHDVCMDANGTLWVVGRGWSADHVVQ--------YSTDGTAMARFDLRRN-----HHLRG 702
Query: 204 IAVS-NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
IA++ + R++V++++ VQ+F +G + + G+++FP +AVDD G I V
Sbjct: 703 IAINMSAKRILVTEADQGAVQVFRPDGSMERRV--RHPQTGEMRFPEYIAVDDDGNILVS 760
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++ + ++ G FL FG S +G+ K G+ S+G+I+V D N R+Q+F
Sbjct: 761 AWNSDFVYLYDESGNFLFKFGGMRSSEGQLKRPFGICTDSSGHIIVADSGNKRVQIF 817
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 117/231 (50%), Gaps = 26/231 (11%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM--GNKAGQLEHPHYIAVSN 154
+ +PRG+ V P N I V D +N RVQV ++G ++ F ++ G ++ N
Sbjct: 927 YWYPRGVVVSPSNDIFVTDHNNRRVQVHSTEGVYLRHFPTVVPGTGDNTIQPRDVCMAGN 986
Query: 155 TNRVIVSD--SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY---IAVS-N 208
+V + S +H VQ + ++GT + +F L+ H+ IAV+
Sbjct: 987 GTLWVVGEGGSADHVVQ--------YSTNGTAMARF--------DLKKSHHFRGIAVNVR 1030
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
T+ V+++D++ V +F +G ++ + S G++K PR + VD +G I V D +N
Sbjct: 1031 TSHVLITDADQGEVLVFRPDGSLVRTV--RYSLAGEIKRPRYITVDGEGNILVSDYNSNS 1088
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ ++ G+F FG GSG+G+ G G+ G+I+V D N R+Q+F
Sbjct: 1089 VYVYDESGKFPFQFGGLGSGEGQLNGPRGICTNRLGHIIVADSRNKRVQIF 1139
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 126/307 (41%), Gaps = 71/307 (23%)
Query: 59 RGIAVG-PDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---AFTWPRGIAVGPDNSIVVA 114
RGIA+ I+V ++ VQV P ++ +P IAV D +I+V+
Sbjct: 701 RGIAINMSAKRILVTEADQGAVQVFRPDGSMERRVRHPQTGEMRFPEYIAVDDDGNILVS 760
Query: 115 DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 174
++ V ++ G F+ KFG M + GQL+ P I ++ +IV+DS N RVQIF
Sbjct: 761 AWNSDFVYLYDESGNFLFKFGGMRSSEGQLKRPFGICTDSSGHIIVADSGNKRVQIF--- 817
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF--------- 225
T +G+F + + P +A+ +++VS+ +H V +F
Sbjct: 818 --------TRLGEFVRTVSTGSE---PACLAMGPEGQLVVSNCLSHTVTVFSGDDSTDEA 866
Query: 226 --DVNGRV---------------------------------------ITSFGSEGSEEGQ 244
D R + +FG E ++ G+
Sbjct: 867 KKDARERYDSRSDRRQDVFGINAPEQERQAAGIEGAPSGSIGDKEQGLVTFGGEETQPGE 926
Query: 245 LKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW--GSGDGEFKGLEGVAVMS 302
+PRGV V I V D N R+Q+ + +G +LR F G+GD + + V +
Sbjct: 927 YWYPRGVVVSPSNDIFVTDHNNRRVQVHSTEGVYLRHFPTVVPGTGDNTIQPRD-VCMAG 985
Query: 303 NGNILVC 309
NG + V
Sbjct: 986 NGTLWVV 992
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD-LKTNCV 93
Y + + F+ G GS G PRGI I+VADS N RVQ+ H + ++T+
Sbjct: 1092 YDESGKFPFQFGGLGSGEGQLNGPRGICTNRLGHIIVADSRNKRVQIFTRHGEYVRTDST 1151
Query: 94 FLAFTWPRGIAVGPDNSIVVA 114
P +AVGP+ +VV
Sbjct: 1152 GFE---PEYLAVGPEGQLVVT 1169
>gi|260825454|ref|XP_002607681.1| hypothetical protein BRAFLDRAFT_123270 [Branchiostoma floridae]
gi|229293030|gb|EEN63691.1| hypothetical protein BRAFLDRAFT_123270 [Branchiostoma floridae]
Length = 616
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 122/246 (49%), Gaps = 34/246 (13%)
Query: 51 EPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----AFTWP---RGI 103
E G F P G++V ++ + +AD N R++ PH + A WP R
Sbjct: 350 EQGKFNHPSGVSVSQNSVLFIADEGNSRIKKIDPHGHYVGQITTMIEGGAEFWPVSIRPF 409
Query: 104 AVGP---DNSIVV------ADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
AV DN VV A SS V +F + G ++GK + E+P IAV N
Sbjct: 410 AVALGWGDNLWVVGQQESTASSSKFAVAIFTTTGKYIGKVVT-------FENPKDIAV-N 461
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
T+R V + V++F++NGRV + K L++PH+I VS ++V
Sbjct: 462 TDRKFVMVIDGSDVKMFNLNGRVVHL----------IKGKDYGLQNPHHITVSQGGDILV 511
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
SDS H V +F G+ + SFGSEGS EG+LK PRG+ D G I V D N+RI +F
Sbjct: 512 SDSAKHMVFVFSEKGQFLRSFGSEGSGEGELKGPRGICTDSSGNIIVADEENSRIVVFDG 571
Query: 275 DGQFLR 280
G+FLR
Sbjct: 572 QGRFLR 577
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 114/227 (50%), Gaps = 15/227 (6%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE----HPHYIAV 152
F P G++V ++ + +AD N R++ G +VG+ +M + P +A+
Sbjct: 354 FNHPSGVSVSQNSVLFIADEGNSRIKKIDPHGHYVGQITTMIEGGAEFWPVSIRPFAVAL 413
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
+ + V +F + G ++GK + E+P IAV NT+R
Sbjct: 414 GWGDNLWVVGQQESTASSSKFAVAIFTTTGKYIGKVVT-------FENPKDIAV-NTDRK 465
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V + V++F++NGRV+ +G + G L+ P + V G I V DS + + +F
Sbjct: 466 FVMVIDGSDVKMFNLNGRVVHLI--KGKDYG-LQNPHHITVSQGGDILVSDSAKHMVFVF 522
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ GQFLR+FG GSG+GE KG G+ S+GNI+V D EN RI VF
Sbjct: 523 SEKGQFLRSFGSEGSGEGELKGPRGICTDSSGNIIVADEENSRIVVF 569
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW---PRG 102
GS GS G PRGI +I+VAD N R+ V FD + + LA T P G
Sbjct: 533 GSEGSGEGELKGPRGICTDSSGNIIVADEENSRIVV----FDGQGRFLRLAVTGVTNPVG 588
Query: 103 IAVGPDNSIVVADSSNH 119
+AV +VV S H
Sbjct: 589 VAVAQAGKLVVTRSDFH 605
>gi|326321788|gb|ADZ53894.1| tripartite motif-containing protein 71 [Equus caballus]
Length = 250
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 52 VVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTMCNQHI--- 96
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R+
Sbjct: 97 -ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRI 155
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL F
Sbjct: 156 QVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKF 215
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
G G+ +G+F VAV S G ILV D NHRIQ
Sbjct: 216 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQ 250
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 82/124 (66%), Gaps = 7/124 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G++V + I+VAD SN+R+QVF+ GTF KFG++G++ GQ + P +A + R++
Sbjct: 134 PWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDASRRIV 193
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+QIF +G F+ KFG G K GQ +P +AV++ +++VSD+ N
Sbjct: 194 VADKDNHRIQIFTF-------EGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRN 246
Query: 220 HRVQ 223
HR+Q
Sbjct: 247 HRIQ 250
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + I+VAD SN+R+QV P L F
Sbjct: 119 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQF 178
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 179 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 238
Query: 158 VIVSDSNNHRVQ 169
++VSD+ NHR+Q
Sbjct: 239 ILVSDTRNHRIQ 250
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 81/148 (54%), Gaps = 17/148 (11%)
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT----- 233
Q +GT+V + QLE H ++V+ N+ I N ++ +GR
Sbjct: 68 QQNGTYVVSYRP------QLEGEHLVSVTMCNQHI----ENSPFKVVVKSGRSYVGIGLP 117
Query: 234 --SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
SFGSEG +G+L P GV+VD +GYI V D NNRIQ+F P G F FG GS G+
Sbjct: 118 GLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQ 177
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F GVA ++ I+V D++NHRIQ+F
Sbjct: 178 FDRPAGVACDASRRIVVADKDNHRIQIF 205
>gi|390362202|ref|XP_003730096.1| PREDICTED: tripartite motif-containing protein 2-like isoform 1
[Strongylocentrotus purpuratus]
gi|390362204|ref|XP_003730097.1| PREDICTED: tripartite motif-containing protein 2-like isoform 2
[Strongylocentrotus purpuratus]
Length = 748
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 147/318 (46%), Gaps = 36/318 (11%)
Query: 19 LLVSGIG-QVGTTPRS-QYLQKRRLQFKIG---SRGSEP----GCFTWPRGIAVGPDNSI 69
L+VS G Q+G +P +Q R G + G P P G+ V +
Sbjct: 449 LIVSVFGKQIGESPLEFDVMQPERQVITFGNLTTSGVNPFMADARLREPWGVTVSDRTGL 508
Query: 70 V-VADSSNHRVQVCFPHFDLKTNCV-------FLAFTWPRGIAVGPDNSIVVADSSNHRV 121
+ VAD+ N ++V FD+ N F P + + ++++V+ D N +V
Sbjct: 509 IYVADTGNSCIRV----FDIDGNAKGQLGFPNFAQRFEPVDLTLNNNDNLVITDHRNQQV 564
Query: 122 QVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSD 181
V DGT FG A +L P +AV++ V V+D +H V+++D D
Sbjct: 565 LVCNQDGTLTQIFG-----AAELRRPCGVAVNSLGYVYVTDHESHCVRVYD-------PD 612
Query: 182 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSE 241
G V G GN G P AV++ + +IVSD +NHR+QIFD +G + G
Sbjct: 613 GLHVRDMGGYGNTLGYFRGPISAAVNSKDELIVSDRDNHRLQIFDTDGDYLLEVTPSGEG 672
Query: 242 EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVM 301
+ + K+P GVA D I V + N R+ F+PDG F++ S + + G+A+
Sbjct: 673 DDEFKYPTGVATDLNDNIYVCNDWNGRVLKFSPDGTFVKRV---DSDEDGLRYPNGIAIT 729
Query: 302 SNGNILVCDRENHRIQVF 319
+G ++V D N ++VF
Sbjct: 730 DDGKVVVVDYGNDCVKVF 747
>gi|326321782|gb|ADZ53891.1| tripartite motif-containing protein 71 [Ceratotherium simum]
Length = 250
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 52 VVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTMCNQHI--- 96
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R+
Sbjct: 97 -ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRI 155
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL F
Sbjct: 156 QVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTLEGQFLLKF 215
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
G G+ +G+F VAV S G ILV D NHRIQ
Sbjct: 216 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQ 250
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 83/124 (66%), Gaps = 7/124 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G++V + IVVAD SN+R+QVF+ GTF KFG++G++ GQ + P +A + R++
Sbjct: 134 PWGVSVDKEGYIVVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDASRRIV 193
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+QIF + +G F+ KFG G K GQ +P +AV++ +++VSD+ N
Sbjct: 194 VADKDNHRIQIFTL-------EGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRN 246
Query: 220 HRVQ 223
HR+Q
Sbjct: 247 HRIQ 250
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 119 LSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQF 178
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 179 DRPAGVACDASRRIVVADKDNHRIQIFTLEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 238
Query: 158 VIVSDSNNHRVQ 169
++VSD+ NHR+Q
Sbjct: 239 ILVSDTRNHRIQ 250
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 81/148 (54%), Gaps = 17/148 (11%)
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT----- 233
Q +GT+V + QLE H ++V+ N+ I N ++ +GR
Sbjct: 68 QQNGTYVVSYRP------QLEGEHLVSVTMCNQHI----ENSPFKVVVKSGRSYVGIGLP 117
Query: 234 --SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
SFGSEG +G+L P GV+VD +GYI V D NNRIQ+F P G F FG GS G+
Sbjct: 118 GLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQ 177
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F GVA ++ I+V D++NHRIQ+F
Sbjct: 178 FDRPAGVACDASRRIVVADKDNHRIQIF 205
>gi|260785692|ref|XP_002587894.1| hypothetical protein BRAFLDRAFT_87282 [Branchiostoma floridae]
gi|229273049|gb|EEN43905.1| hypothetical protein BRAFLDRAFT_87282 [Branchiostoma floridae]
Length = 779
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 130/269 (48%), Gaps = 63/269 (23%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM-----------------GN 139
F +PRG+ V P N I VAD +N RVQV ++G ++ F ++ GN
Sbjct: 525 FYFPRGVVVSPSNEIFVADKNNRRVQVHSTEGVYLRHFPTVVPGKGDKDMEPYDVCMDGN 584
Query: 140 -------KAGQLEH---------------------PHYIAVS-NTNRVIVSDSNNHRVQI 170
+ G EH IAV+ TN ++V+D++N V
Sbjct: 585 GTLWVVGRGGTAEHVVQYSTDGTAMAGFDLKMIGYSRGIAVNMRTNHILVTDASNIEVH- 643
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VF+ D + V ++ + G++ P YI V ++VSD +++ V ++D G+
Sbjct: 644 ------VFRPDSSLVR---TVRHPRGEMIRPGYITVDGEGNILVSDWDSNFVYVYDEFGK 694
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+ FG EGS EGQLK+PRG+ D G+I V DS N R+QIFT G+F+R GS
Sbjct: 695 FLFQFGGEGSGEGQLKYPRGICTDSSGHILVADSDNRRVQIFTRHGEFVRTVRT-GSRP- 752
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
EG+AV G ++V + +H + V+
Sbjct: 753 -----EGLAVGPEGQLVVTNHSDHTVTVY 776
>gi|260822773|ref|XP_002606776.1| hypothetical protein BRAFLDRAFT_226091 [Branchiostoma floridae]
gi|229292120|gb|EEN62786.1| hypothetical protein BRAFLDRAFT_226091 [Branchiostoma floridae]
Length = 238
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 123/239 (51%), Gaps = 20/239 (8%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW-PR 101
+ G GS+ G F P +AV D + V+D+ NHRVQ P +L + P
Sbjct: 8 LRFGQPGSQHGQFELPVDVAVRGDR-LYVSDNFNHRVQKFSPSGELLHKFPLGEYCMKPY 66
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
G+ V D +VVAD H + +F++DGT V + G G Q + P ++ V + + V+
Sbjct: 67 GLTVQRDGRVVVADPGKHSIFLFEADGTLVKQVGGQGQGEEQFDEPCFVTVDKEDNIFVA 126
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD----- 216
D NNHR+Q+FD N + F KFG G + + P ++V N +++S+
Sbjct: 127 DQNNHRIQVFDKNLK-------FQRKFGKKGRQPQDMWWPTGVSVDNRGNIVLSNVGGTA 179
Query: 217 ---SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+++ ++Q+F +G ++S S E ++ P GVAV + GY+ V D+G++ I+ +
Sbjct: 180 DGVAHSQKLQVFHPDGTWVSSI---SSNEDKMYEPYGVAVTEDGYVFVTDTGDHCIRKY 235
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 118/231 (51%), Gaps = 23/231 (9%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P +AV D + V+D+ NHRVQ F G + KF +G + P+ + V
Sbjct: 20 FELPVDVAVRGDR-LYVSDNFNHRVQKFSPSGELLHKF-PLGEYCMK---PYGLTVQRDG 74
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
RV+V+D H + +F ++DGT V + G G Q + P ++ V + + V+D
Sbjct: 75 RVVVADPGKHSIFLF-------EADGTLVKQVGGQGQGEEQFDEPCFVTVDKEDNIFVAD 127
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG--------NNR 268
NNHR+Q+FD N + FG +G + + +P GV+VD++G I + + G + +
Sbjct: 128 QNNHRIQVFDKNLKFQRKFGKKGRQPQDMWWPTGVSVDNRGNIVLSNVGGTADGVAHSQK 187
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+Q+F PDG ++ + S + + GVAV +G + V D +H I+ +
Sbjct: 188 LQVFHPDGTWVSSI---SSNEDKMYEPYGVAVTEDGYVFVTDTGDHCIRKY 235
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVD-DQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+ FG GS+ GQ + P VAV D+ Y+S D+ N+R+Q F+P G+ L F G
Sbjct: 7 VLRFGQPGSQHGQFELPVDVAVRGDRLYVS--DNFNHRVQKFSPSGELLHKFPL-----G 59
Query: 291 EF-KGLEGVAVMSNGNILVCDRENHRIQVF 319
E+ G+ V +G ++V D H I +F
Sbjct: 60 EYCMKPYGLTVQRDGRVVVADPGKHSIFLF 89
>gi|326321764|gb|ADZ53882.1| tripartite motif-containing protein 71 [Platanista gangetica]
Length = 250
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 52 VVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI--- 96
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R+
Sbjct: 97 -ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRI 155
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL F
Sbjct: 156 QVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDTSRRIVVADKDNHRIQIFTFEGQFLLKF 215
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
G GS +G+F VAV S G ILV D NHRIQ
Sbjct: 216 GEKGSKNGQFNYPWDVAVNSEGMILVSDTRNHRIQ 250
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 81/124 (65%), Gaps = 7/124 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G++V + IVVAD SN+R+QVF+ G F KFG++G++ GQ + P +A + R++
Sbjct: 134 PWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDTSRRIV 193
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+QIF +G F+ KFG G+K GQ +P +AV++ ++VSD+ N
Sbjct: 194 VADKDNHRIQIFTF-------EGQFLLKFGEKGSKNGQFNYPWDVAVNSEGMILVSDTRN 246
Query: 220 HRVQ 223
HR+Q
Sbjct: 247 HRIQ 250
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 81/148 (54%), Gaps = 17/148 (11%)
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT----- 233
Q +GT+V + QLE H ++V+ N+ I N ++ +GR
Sbjct: 68 QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI----ENSPFKVVVKSGRSYVGIGLP 117
Query: 234 --SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
SFGSEG +G+L P GV+VD +GYI V D NNRIQ+F P G F FG GS G+
Sbjct: 118 GLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQ 177
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F GVA ++ I+V D++NHRIQ+F
Sbjct: 178 FDRPAGVACDTSRRIVVADKDNHRIQIF 205
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 119 LSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 178
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G+K GQ +P +AV++
Sbjct: 179 DRPAGVACDTSRRIVVADKDNHRIQIFTFEGQFLLKFGEKGSKNGQFNYPWDVAVNSEGM 238
Query: 158 VIVSDSNNHRVQ 169
++VSD+ NHR+Q
Sbjct: 239 ILVSDTRNHRIQ 250
>gi|326321744|gb|ADZ53872.1| tripartite motif-containing protein 71 [Neophocaena phocaenoides]
gi|326321746|gb|ADZ53873.1| tripartite motif-containing protein 71 [Lipotes vexillifer]
gi|326321748|gb|ADZ53874.1| tripartite motif-containing protein 71 [Delphinus capensis]
gi|326321752|gb|ADZ53876.1| tripartite motif-containing protein 71 [Stenella attenuata]
gi|326321754|gb|ADZ53877.1| tripartite motif-containing protein 71 [Tursiops aduncus]
gi|326321756|gb|ADZ53878.1| tripartite motif-containing protein 71 [Stenella coeruleoalba]
gi|326321758|gb|ADZ53879.1| tripartite motif-containing protein 71 [Sousa chinensis]
gi|326321760|gb|ADZ53880.1| tripartite motif-containing protein 71 [Balaenoptera omurai]
gi|326321770|gb|ADZ53885.1| tripartite motif-containing protein 71 [Delphinapterus leucas]
gi|326321774|gb|ADZ53887.1| tripartite motif-containing protein 71 [Balaenoptera acutorostrata]
Length = 250
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 52 VVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI--- 96
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R+
Sbjct: 97 -ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRI 155
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL F
Sbjct: 156 QVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDTSRRIVVADKDNHRIQIFTFEGQFLLKF 215
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
G G+ +G+F VAV S G ILV D NHRIQ
Sbjct: 216 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQ 250
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 81/124 (65%), Gaps = 7/124 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G++V + IVVAD SN+R+QVF+ G F KFG++G++ GQ + P +A + R++
Sbjct: 134 PWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDTSRRIV 193
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+QIF +G F+ KFG G K GQ +P +AV++ +++VSD+ N
Sbjct: 194 VADKDNHRIQIFTF-------EGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRN 246
Query: 220 HRVQ 223
HR+Q
Sbjct: 247 HRIQ 250
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 119 LSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 178
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 179 DRPAGVACDTSRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 238
Query: 158 VIVSDSNNHRVQ 169
++VSD+ NHR+Q
Sbjct: 239 ILVSDTRNHRIQ 250
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 81/148 (54%), Gaps = 17/148 (11%)
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT----- 233
Q +GT+V + QLE H ++V+ N+ I N ++ +GR
Sbjct: 68 QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI----ENSPFKVVVKSGRSYVGIGLP 117
Query: 234 --SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
SFGSEG +G+L P GV+VD +GYI V D NNRIQ+F P G F FG GS G+
Sbjct: 118 GLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQ 177
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F GVA ++ I+V D++NHRIQ+F
Sbjct: 178 FDRPAGVACDTSRRIVVADKDNHRIQIF 205
>gi|167042172|gb|ABZ06905.1| putative NHL repeat protein [uncultured marine crenarchaeote
HF4000_ANIW93H17]
Length = 1183
Score = 114 bits (286), Expect = 5e-23, Method: Composition-based stats.
Identities = 87/268 (32%), Positives = 133/268 (49%), Gaps = 18/268 (6%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPH-----FDLKTNCVFLA-FTWPRGIAVGPDNSI 111
P+ IAV + +I VAD+ N R+Q F H TN V P GIA+ +N++
Sbjct: 64 PQQIAVDDERNIYVADTGNSRIQK-FTHEGQFLSSWGTNGVENGELQSPVGIAI-YENNV 121
Query: 112 VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
V D + VQ F +DG F+ K+G GN+ GQ P I + ++ V V+DS NHR+Q
Sbjct: 122 YVVDEKQNTVQKFDNDGNFILKWGERGNENGQFSSPQGITIDSSGIVYVADSKNHRIQ-- 179
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
F SDG F+ FG G G+L+ P +AV + + VSD ++++ + +G
Sbjct: 180 -----QFTSDGEFLSSFGKFGYGDGKLKTPVDVAVYG-DFIYVSDPGGYKIEKYTSDGIF 233
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ SF + + G P G+ VD G I D+ R+ DG+ L +G G GDG+
Sbjct: 234 LKSF--DYNFGGFSVRPGGLTVDPNGNIYFVDAAKYRVVKINSDGRTLATWGSIGKGDGK 291
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F + + + + G + V D +Q F
Sbjct: 292 FIEPKDLVLDNRGYLFVLDSSLGLVQKF 319
Score = 78.6 bits (192), Expect = 4e-12, Method: Composition-based stats.
Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 53/233 (22%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRG 102
K G RG+E G F+ P+GI + + VADS NHR
Sbjct: 142 LKWGERGNENGQFSSPQGITIDSSGIVYVADSKNHR------------------------ 177
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+Q F SDG F+ FG G G+L+ P +AV + + VSD
Sbjct: 178 ------------------IQQFTSDGEFLSSFGKFGYGDGKLKTPVDVAVYG-DFIYVSD 218
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
++++ + SDG F+ F N G P + V + D+ +RV
Sbjct: 219 PGGYKIE-------KYTSDGIFLKSFDY--NFGGFSVRPGGLTVDPNGNIYFVDAAKYRV 269
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF-TP 274
+ +GR + ++GS G +G+ P+ + +D++GY+ V DS +Q F TP
Sbjct: 270 VKINSDGRTLATWGSIGKGDGKFIEPKDLVLDNRGYLFVLDSSLGLVQKFETP 322
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 246 KFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
K P+ +AVDD+ I V D+GN+RIQ FT +GQFL ++G G +GE + G+A+ N N
Sbjct: 62 KLPQQIAVDDERNIYVADTGNSRIQKFTHEGQFLSSWGTNGVENGELQSPVGIAIYEN-N 120
Query: 306 ILVCDRENHRIQVF 319
+ V D + + +Q F
Sbjct: 121 VYVVDEKQNTVQKF 134
>gi|326321786|gb|ADZ53893.1| tripartite motif-containing protein 71 [Canis lupus familiaris]
Length = 250
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 52 VVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTMCNQHI--- 96
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R+
Sbjct: 97 -ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRI 155
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQ+FT +GQFL F
Sbjct: 156 QVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDTSRRIVVADKDNHRIQVFTFEGQFLLKF 215
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
G G+ +G+F VAV S G ILV D NHRIQ
Sbjct: 216 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQ 250
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 82/124 (66%), Gaps = 7/124 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G++V + IVVAD SN+R+QVF+ GTF KFG++G++ GQ + P +A + R++
Sbjct: 134 PWGVSVDKEGYIVVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDTSRRIV 193
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+Q+F +G F+ KFG G K GQ +P +AV++ +++VSD+ N
Sbjct: 194 VADKDNHRIQVFTF-------EGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRN 246
Query: 220 HRVQ 223
HR+Q
Sbjct: 247 HRIQ 250
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 119 LSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQF 178
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+QVF +G F+ KFG G K GQ +P +AV++ +
Sbjct: 179 DRPAGVACDTSRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 238
Query: 158 VIVSDSNNHRVQ 169
++VSD+ NHR+Q
Sbjct: 239 ILVSDTRNHRIQ 250
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 81/148 (54%), Gaps = 17/148 (11%)
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT----- 233
Q +GT+V + QLE H ++V+ N+ I N ++ +GR
Sbjct: 68 QQNGTYVVSYRP------QLEGEHLVSVTMCNQHI----ENSPFKVVVKSGRSYVGIGLP 117
Query: 234 --SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
SFGSEG +G+L P GV+VD +GYI V D NNRIQ+F P G F FG GS G+
Sbjct: 118 GLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQ 177
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F GVA ++ I+V D++NHRIQVF
Sbjct: 178 FDRPAGVACDTSRRIVVADKDNHRIQVF 205
>gi|340380570|ref|XP_003388795.1| PREDICTED: hypothetical protein LOC100636463 [Amphimedon
queenslandica]
Length = 797
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 95 LAFTWPRGIAVGP-DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
L F P GIA+ P + VAD +NHR+QV D TF FGS G+ GQL +P +IA+
Sbjct: 17 LQFNIPAGIAISPITGQVYVADRANHRIQVLNPDLTFSHSFGSEGSANGQLSYPRHIAID 76
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN--TNR 211
+ V V+DS NHR+Q F + DG FV +FG G+ GQL P I + T
Sbjct: 77 SQGLVYVADSGNHRIQKFSL-------DGQFVAQFGIKGSGPGQLNGPFGITIDTGATGL 129
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
V VS+ NN R+ +F +G I SFG S Q P G+A D G++S
Sbjct: 130 VYVSEWNNSRISVFTSDGLFINSFGKNDSTY-QFYHPYGLAFDKAGFLS 177
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 83/142 (58%), Gaps = 3/142 (2%)
Query: 181 DGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
DG + G GN Q P IA+S T +V V+D NHR+Q+ + + SFGSEG
Sbjct: 2 DGYLITSVGEEGNGPLQFNIPAGIAISPITGQVYVADRANHRIQVLNPDLTFSHSFGSEG 61
Query: 240 SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVA 299
S GQL +PR +A+D QG + V DSGN+RIQ F+ DGQF+ FG GSG G+ G G+
Sbjct: 62 SANGQLSYPRHIAIDSQGLVYVADSGNHRIQKFSLDGQFVAQFGIKGSGPGQLNGPFGIT 121
Query: 300 VMS--NGNILVCDRENHRIQVF 319
+ + G + V + N RI VF
Sbjct: 122 IDTGATGLVYVSEWNNSRISVF 143
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 90/160 (56%), Gaps = 10/160 (6%)
Query: 127 DGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFV 185
DG + G GN Q P IA+S T +V V+D NHR+Q+ + D TF
Sbjct: 2 DGYLITSVGEEGNGPLQFNIPAGIAISPITGQVYVADRANHRIQVLN-------PDLTFS 54
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL 245
FGS G+ GQL +P +IA+ + V V+DS NHR+Q F ++G+ + FG +GS GQL
Sbjct: 55 HSFGSEGSANGQLSYPRHIAIDSQGLVYVADSGNHRIQKFSLDGQFVAQFGIKGSGPGQL 114
Query: 246 KFPRGVAVDD--QGYISVGDSGNNRIQIFTPDGQFLRAFG 283
P G+ +D G + V + N+RI +FT DG F+ +FG
Sbjct: 115 NGPFGITIDTGATGLVYVSEWNNSRISVFTSDGLFINSFG 154
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 103/221 (46%), Gaps = 31/221 (14%)
Query: 45 IGSRGSEPGCFTWPRGIAVGP-DNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
+G G+ P F P GIA+ P + VAD +NHR+QV P DL + F +
Sbjct: 9 VGEEGNGPLQFNIPAGIAISPITGQVYVADRANHRIQVLNP--DLTFSHSFGSEGSANGQ 66
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-- 154
++PR IA+ + VADS NHR+Q F DG FV +FG G+ GQL P I +
Sbjct: 67 LSYPRHIAIDSQGLVYVADSGNHRIQKFSLDGQFVAQFGIKGSGPGQLNGPFGITIDTGA 126
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN------ 208
T V VS+ NN R+ VF SDG F+ FG + Q HP+ +A
Sbjct: 127 TGLVYVSEWNNSRIS-------VFTSDGLFINSFGK-NDSTYQFYHPYGLAFDKAGFLSE 178
Query: 209 --TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
R+I +N H D GR + ++ S+ LK
Sbjct: 179 LIAKRLIELGANVHEK---DTEGRTAAHWAAKRSDINMLKL 216
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
++G +ITS G EG+ Q P G+A+ G + V D N+RIQ+ PD F +FG
Sbjct: 1 MDGYLITSVGEEGNGPLQFNIPAGIAISPITGQVYVADRANHRIQVLNPDLTFSHSFGSE 60
Query: 286 GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GS +G+ +A+ S G + V D NHRIQ F
Sbjct: 61 GSANGQLSYPRHIAIDSQGLVYVADSGNHRIQKF 94
>gi|326321778|gb|ADZ53889.1| tripartite motif-containing protein 71 [Sus scrofa]
gi|326321784|gb|ADZ53892.1| tripartite motif-containing protein 71 [Bos taurus]
Length = 250
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 52 VVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI--- 96
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R+
Sbjct: 97 -ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRI 155
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL F
Sbjct: 156 QVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKF 215
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
G G+ +G+F VAV S G ILV D NHRIQ
Sbjct: 216 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQ 250
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 81/124 (65%), Gaps = 7/124 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G++V + IVVAD SN+R+QVF+ G F KFG++G++ GQ + P +A + R++
Sbjct: 134 PWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIV 193
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+QIF +G F+ KFG G K GQ +P +AV++ +++VSD+ N
Sbjct: 194 VADKDNHRIQIFTF-------EGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRN 246
Query: 220 HRVQ 223
HR+Q
Sbjct: 247 HRIQ 250
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 119 LSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 178
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 179 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 238
Query: 158 VIVSDSNNHRVQ 169
++VSD+ NHR+Q
Sbjct: 239 ILVSDTRNHRIQ 250
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 81/148 (54%), Gaps = 17/148 (11%)
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT----- 233
Q +GT+V + QLE H ++V+ N+ I N ++ +GR
Sbjct: 68 QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI----ENSPFKVVVKSGRSYVGIGLP 117
Query: 234 --SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
SFGSEG +G+L P GV+VD +GYI V D NNRIQ+F P G F FG GS G+
Sbjct: 118 GLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQ 177
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F GVA ++ I+V D++NHRIQ+F
Sbjct: 178 FDRPAGVACDASRRIVVADKDNHRIQIF 205
>gi|118575759|ref|YP_875502.1| hypothetical protein CENSYa_0565 [Cenarchaeum symbiosum A]
gi|118194280|gb|ABK77198.1| hypothetical protein CENSYa_0565 [Cenarchaeum symbiosum A]
Length = 1566
Score = 114 bits (285), Expect = 6e-23, Method: Composition-based stats.
Identities = 80/273 (29%), Positives = 134/273 (49%), Gaps = 28/273 (10%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-----------AFTWPRGIAVG 106
P+G+A GPD S+ V D N RVQ FD + FL +F P GIAVG
Sbjct: 3 PQGVAAGPDGSVYVTDLGNMRVQ----KFD--DSGAFLLQWGGQGIANGSFKSPEGIAVG 56
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
++++ V D +RVQ F +G F+ +G+ G+ +G+ P IA + V+D+ NH
Sbjct: 57 ENHTVYVVDGQLNRVQAFTPEGEFLFGWGTQGSNSGEFLLPRGIAADPGGDIYVADTGNH 116
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
R+Q F DG +V + +G+ P +A + V V+ + + ++ +
Sbjct: 117 RIQ-------RFTPDGGYVSEI--VGSSGSGFISPAGLAAAGNGTVYVTFAGGNAIEKYG 167
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
G +++ + S S G+ G+ D +G + V D+GN+RI +G+ + +G G
Sbjct: 168 GTGELLSRYDS--SVGGRPIRAHGLEADPEGNLYVADTGNDRILRLDANGEAISVWGSSG 225
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
S G FK + +A+ + ++ V D HR+Q F
Sbjct: 226 SDGGMFKMPQDLALGPDNSLYVVDANGHRVQKF 258
Score = 96.3 bits (238), Expect = 2e-17, Method: Composition-based stats.
Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 17/235 (7%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL-----KTNCVFLAFTWP 100
G +G G F P GIAVG ++++ V D +RVQ P + F P
Sbjct: 38 GGQGIANGSFKSPEGIAVGENHTVYVVDGQLNRVQAFTPEGEFLFGWGTQGSNSGEFLLP 97
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
RGIA P I VAD+ NHR+Q F DG +V + +G+ P +A + V V
Sbjct: 98 RGIAADPGGDIYVADTGNHRIQRFTPDGGYVSEI--VGSSGSGFISPAGLAAAGNGTVYV 155
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+ + + ++ + G + + VG G+ H + + V+D+ N
Sbjct: 156 TFAGGNAIEKYGGTGELLSRYDSSVG---------GRPIRAHGLEADPEGNLYVADTGND 206
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF-TP 274
R+ D NG I+ +GS GS+ G K P+ +A+ + V D+ +R+Q F TP
Sbjct: 207 RILRLDANGEAISVWGSSGSDGGMFKMPQDLALGPDNSLYVVDANGHRVQKFGTP 261
Score = 80.9 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 18/199 (9%)
Query: 30 TPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
TP ++L F G++GS G F PRGIA P I VAD+ NHR+Q P
Sbjct: 75 TPEGEFL------FGWGTQGSNSGEFLLPRGIAADPGGDIYVADTGNHRIQRFTPDGGYV 128
Query: 90 TNCVFLA---FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH 146
+ V + F P G+A + ++ V + + ++ + G + ++ S + G+
Sbjct: 129 SEIVGSSGSGFISPAGLAAAGNGTVYVTFAGGNAIEKYGGTGELLSRYDS--SVGGRPIR 186
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
H + + V+D+ N R+ D NG + +GS G+ G + P +A+
Sbjct: 187 AHGLEADPEGNLYVADTGNDRILRLDANGEA-------ISVWGSSGSDGGMFKMPQDLAL 239
Query: 207 SNTNRVIVSDSNNHRVQIF 225
N + V D+N HRVQ F
Sbjct: 240 GPDNSLYVVDANGHRVQKF 258
>gi|260785688|ref|XP_002587892.1| hypothetical protein BRAFLDRAFT_87280 [Branchiostoma floridae]
gi|229273047|gb|EEN43903.1| hypothetical protein BRAFLDRAFT_87280 [Branchiostoma floridae]
Length = 856
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 150/305 (49%), Gaps = 33/305 (10%)
Query: 25 GQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--- 81
G GT S +K+R+ G G+EP F PRG+ V P N I VAD N RVQV
Sbjct: 564 GTEGTASGSTGDRKQRV-ITFGVMGTEPREFLDPRGVVVSPSNEIFVADRGNERVQVRST 622
Query: 82 ---CFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFG 135
HF P + + + ++ V ++++H VQ + +DGT + F
Sbjct: 623 EGVYLRHFPTVVPGTGDKDMQPHDVCMDGNGTLWVVGRGETTDHVVQ-YSTDGTAMAGF- 680
Query: 136 SMGNKAGQLEHPHYIAVS-NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK 194
++ + IA++ TN ++V+D++ V VF+ DG+ V +
Sbjct: 681 ----DLKKIGYSRGIALNMRTNHILVTDADQGAVH-------VFRPDGSLVRTV--RHPR 727
Query: 195 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
G+++ P YI V ++VSD +++ V ++D +G+ + FG GS E QL P G+ D
Sbjct: 728 GGEMKRPGYITVDGEGNILVSDWDSNFVYVYDASGKFLFQFGGWGSGEDQLWNPAGICTD 787
Query: 255 DQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
G+I V D+GN RIQIFT G+F+RA F+ + G+A+ G ++V R N
Sbjct: 788 SSGHIIVVDTGNERIQIFTRHGEFVRAVRTG------FQPV-GLALGPEGQLVVTSRWNR 840
Query: 315 RIQVF 319
+ VF
Sbjct: 841 TVTVF 845
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRG 102
F+ G GS P GI I+V D+ N R+Q+ H + V F P G
Sbjct: 766 FQFGGWGSGEDQLWNPAGICTDSSGHIIVVDTGNERIQIFTRHGEF-VRAVRTGFQ-PVG 823
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSD 127
+A+GP+ +VV N V VF ++
Sbjct: 824 LALGPEGQLVVTSRWNRTVTVFTTE 848
>gi|296133348|ref|YP_003640595.1| NHL repeat containing protein [Thermincola potens JR]
gi|296031926|gb|ADG82694.1| NHL repeat containing protein [Thermincola potens JR]
Length = 335
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 131/278 (47%), Gaps = 25/278 (8%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------AFTWPRGI 103
G F P + V DN I ++D++NHRVQ+ FD + N + + F +P G+
Sbjct: 70 GEFEKPMAVTV-MDNKIYISDTNNHRVQI----FDYEGNPLKIFGGYGSEPGKFQFPYGL 124
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 163
A G D + VAD + V +DG F+ F + P + + + N++ V+D
Sbjct: 125 A-GKDGKLYVADLYTGAISVVDADGKFLNYFAEKKPSENIIAAPAGLFIDD-NKLYVTDV 182
Query: 164 NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
H V +FD+ G++ ++ G G + GQ P+ + V + V D+ N RVQ
Sbjct: 183 KKHAVLVFDLQGKLLKT-------IGKPGREPGQFLAPNAVTVDRDGNIYVVDTGNQRVQ 235
Query: 224 IFDVNGRVITSFGSEGSEEGQLKF--PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+FD NG+ + +G F PRG+ +D +G I V + + I F DG+ + +
Sbjct: 236 VFDKNGKFMKIINGSKDGKGDSVFVNPRGIGIDRKGNILVVSNLTHFIYGFDKDGKKIFS 295
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G + +F G+ V G + + D N R+ V+
Sbjct: 296 FGGQGEDNEQFTLPNGLYVDDQGRVYITDTANARVTVY 333
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 14/233 (6%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC-----FPHFDLKTNCVFLAFTWP 100
G GSEPG F +P G+A G D + VAD + V F ++ + P
Sbjct: 109 GGYGSEPGKFQFPYGLA-GKDGKLYVADLYTGAISVVDADGKFLNYFAEKKPSENIIAAP 167
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+ + DN + V D H V VF G + G G + GQ P+ + V + V
Sbjct: 168 AGLFID-DNKLYVTDVKKHAVLVFDLQGKLLKTIGKPGREPGQFLAPNAVTVDRDGNIYV 226
Query: 161 SDSNNHRVQIFDVNGRVFQS-DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
D+ N RVQ+FD NG+ + +G+ GK S+ +P I + ++V +
Sbjct: 227 VDTGNQRVQVFDKNGKFMKIINGSKDGKGDSV------FVNPRGIGIDRKGNILVVSNLT 280
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
H + FD +G+ I SFG +G + Q P G+ VDDQG + + D+ N R+ ++
Sbjct: 281 HFIYGFDKDGKKIFSFGGQGEDNEQFTLPNGLYVDDQGRVYITDTANARVTVY 333
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 20/149 (13%)
Query: 36 LQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL 95
LQ + L+ IG G EPG F P + V D +I V D+ N RVQV FD N F+
Sbjct: 192 LQGKLLK-TIGKPGREPGQFLAPNAVTVDRDGNIYVVDTGNQRVQV----FD--KNGKFM 244
Query: 96 -------------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
F PRGI + +I+V + H + F DG + FG G
Sbjct: 245 KIINGSKDGKGDSVFVNPRGIGIDRKGNILVVSNLTHFIYGFDKDGKKIFSFGGQGEDNE 304
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
Q P+ + V + RV ++D+ N RV ++
Sbjct: 305 QFTLPNGLYVDDQGRVYITDTANARVTVY 333
>gi|383763361|ref|YP_005442343.1| hypothetical protein CLDAP_24060 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381383629|dbj|BAM00446.1| hypothetical protein CLDAP_24060 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 1363
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 151/319 (47%), Gaps = 38/319 (11%)
Query: 32 RSQYLQKRRLQFKI---GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-----CF 83
R Q + L + GS G+ F +P +AV +I VAD +N RVQ +
Sbjct: 333 RVQIFNRNTLAYVATIGGSYGTGNNQFKFPTDVAVDAAGNIYVADYANKRVQQYNSSRIY 392
Query: 84 PHFDLKTNCVFLA----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGT---FVGKFGS 136
T ++A F +P G+AVGPD SI V + HR+ + G VG+ G
Sbjct: 393 QRTYGTTGVSYVASNDRFYYPEGVAVGPDGSIYVVEGYGHRLVKLNAAGVPQWTVGEAGQ 452
Query: 137 MGNKAGQLEHPHYIAVSNTNRVIVSDS---------NNHRVQIFDVNGRVFQSDGTFVGK 187
G+ + +AV R+ ++ NHR+QIF+ DG++ G
Sbjct: 453 PGDDNAHFGYLRDVAVGPDGRIYTIEAWGSARYAPGGNHRLQIFN-------PDGSYYGG 505
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSE---GSEEGQ 244
FG G+ Q PH IA+ +V ++D +NHRVQI++ + + G GS+
Sbjct: 506 FGGYGSGNYQFIAPHGIAIDQAGKVYIADRDNHRVQIYNSQLAYVATLGQTGVPGSDNSH 565
Query: 245 LKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD--GEFKGL--EGVAV 300
+P VAVD G I V D GN+RIQ+F + Q++R G G+G G F+G +AV
Sbjct: 566 FNYPFDVAVDRNGIIYVADEGNDRIQVFNSNLQYVRTIGGGGTGRDFGHFEGWGPHHLAV 625
Query: 301 MSNGNILVCDRENHRIQVF 319
S G + V D N R+QVF
Sbjct: 626 DSQGRLYVVDTGNQRVQVF 644
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 120/232 (51%), Gaps = 17/232 (7%)
Query: 100 PRGIAVGPDNSIVVADSS-------NHRVQVFQSDGTFVGKFG--SMGNKAGQLEHPHYI 150
P IA +I V+DS N+RVQ+F S G + G S G QL P +I
Sbjct: 205 PISIAFDGSGNIYVSDSGYWGSDYGNNRVQIFNSSGNHLATIGGGSCGTGNTQLCWPRHI 264
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
A+ N + V+D++NHRVQIF+++ + +G GS G+ + + P +AV + N
Sbjct: 265 AIYG-NLLYVADADNHRVQIFNISNPAAPAYAGTLGTTGSPGSGNNRFDTPQGVAV-DAN 322
Query: 211 RVIVSDSNNHRVQIFDVN--GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
+ V+D+ NHRVQIF+ N V T GS G+ Q KFP VAVD G I V D N R
Sbjct: 323 YIYVADTENHRVQIFNRNTLAYVATIGGSYGTGNNQFKFPTDVAVDAAGNIYVADYANKR 382
Query: 269 IQIFTPDGQFLRAFGCWG----SGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+Q + + R +G G + + F EGVAV +G+I V + HR+
Sbjct: 383 VQQYNSSRIYQRTYGTTGVSYVASNDRFYYPEGVAVGPDGSIYVVEGYGHRL 434
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 147/316 (46%), Gaps = 34/316 (10%)
Query: 34 QYLQKRRLQFKIGSRG----SEPGCFTWPRGIAVGPDNSIVVADSSNHRV----QVCFPH 85
QY R Q G+ G + F +P G+AVGPD SI V + HR+ P
Sbjct: 385 QYNSSRIYQRTYGTTGVSYVASNDRFYYPEGVAVGPDGSIYVVEGYGHRLVKLNAAGVPQ 444
Query: 86 FDL----KTNCVFLAFTWPRGIAVGPDNSIVV---------ADSSNHRVQVFQSDGTFVG 132
+ + + F + R +AVGPD I A NHR+Q+F DG++ G
Sbjct: 445 WTVGEAGQPGDDNAHFGYLRDVAVGPDGRIYTIEAWGSARYAPGGNHRLQIFNPDGSYYG 504
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
FG G+ Q PH IA+ +V ++D +NHRVQI++ + +G+ G G
Sbjct: 505 GFGGYGSGNYQFIAPHGIAIDQAGKVYIADRDNHRVQIYNSQLAYVAT----LGQTGVPG 560
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF----P 248
+ +P +AV + V+D N R+Q+F+ N + + + G G+ F P
Sbjct: 561 SDNSHFNYPFDVAVDRNGIIYVADEGNDRIQVFNSNLQYVRTIGGGGTGRDFGHFEGWGP 620
Query: 249 RGVAVDDQGYISVGDSGNNRIQIF----TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNG 304
+AVD QG + V D+GN R+Q+F + G WG+ G F + G+A+ +
Sbjct: 621 HHLAVDSQGRLYVVDTGNQRVQVFDNFANGNAYLTTIGGAWGTEPGRFSNILGIAIGPDD 680
Query: 305 NILVCD-RENHRIQVF 319
++ + NHRIQ F
Sbjct: 681 SVYTSEIHNNHRIQKF 696
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 138/300 (46%), Gaps = 31/300 (10%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLA--- 96
GS G+ WPR IA+ N + VAD+ NHRVQ+ P +
Sbjct: 249 GSCGTGNTQLCWPRHIAI-YGNLLYVADADNHRVQIFNISNPAAPAYAGTLGTTGSPGSG 307
Query: 97 ---FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDG-TFVGKF-GSMGNKAGQLEHPHYIA 151
F P+G+AV N I VAD+ NHRVQ+F + +V GS G Q + P +A
Sbjct: 308 NNRFDTPQGVAVDA-NYIYVADTENHRVQIFNRNTLAYVATIGGSYGTGNNQFKFPTDVA 366
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V + V+D N RVQ ++ + R++Q G N + +P +AV
Sbjct: 367 VDAAGNIYVADYANKRVQQYN-SSRIYQRTYGTTGVSYVASND--RFYYPEGVAVGPDGS 423
Query: 212 VIVSDSNNHRVQIFDVNG---RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDS---- 264
+ V + HR+ + G + G G + + R VAV G I ++
Sbjct: 424 IYVVEGYGHRLVKLNAAGVPQWTVGEAGQPGDDNAHFGYLRDVAVGPDGRIYTIEAWGSA 483
Query: 265 -----GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GN+R+QIF PDG + FG +GSG+ +F G+A+ G + + DR+NHR+Q++
Sbjct: 484 RYAPGGNHRLQIFNPDGSYYGGFGGYGSGNYQFIAPHGIAIDQAGKVYIADRDNHRVQIY 543
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 130/293 (44%), Gaps = 79/293 (26%)
Query: 97 FTWPRGI-AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG-------------------- 135
F W G+ VG N++ +AD+ HRV F + G F+ K G
Sbjct: 103 FYWVEGVGTVG--NAVWIADTLAHRVLKFDASGNFLQKIGKAGVIDYTGTSLMRITDVAE 160
Query: 136 --------------------SMGNKAGQL-------------EHPHYIAVSNTNRVIVSD 162
S G K G+L E+P IA + + VSD
Sbjct: 161 DGSGNIWVVDAEASHVVKYNSSGEKIGELGQAWNSGSANDRFENPISIAFDGSGNIYVSD 220
Query: 163 S-------NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
S N+RVQIF+ +G + G GS G QL P +IA+ N + V+
Sbjct: 221 SGYWGSDYGNNRVQIFNSSGNHLATIGG-----GSCGTGNTQLCWPRHIAIYG-NLLYVA 274
Query: 216 DSNNHRVQIFDVNGRVITSF-------GSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
D++NHRVQIF+++ ++ GS GS + P+GVAV D YI V D+ N+R
Sbjct: 275 DADNHRVQIFNISNPAAPAYAGTLGTTGSPGSGNNRFDTPQGVAV-DANYIYVADTENHR 333
Query: 269 IQIFTPDGQFLRAF--GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+QIF + A G +G+G+ +FK VAV + GNI V D N R+Q +
Sbjct: 334 VQIFNRNTLAYVATIGGSYGTGNNQFKFPTDVAVDAAGNIYVADYANKRVQQY 386
>gi|260811378|ref|XP_002600399.1| hypothetical protein BRAFLDRAFT_237338 [Branchiostoma floridae]
gi|229285686|gb|EEN56411.1| hypothetical protein BRAFLDRAFT_237338 [Branchiostoma floridae]
Length = 373
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 128/280 (45%), Gaps = 36/280 (12%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF----TWPRGIA---- 104
G P G+AV D +I V + N RVQ+ FD T +F P GI
Sbjct: 114 GELDGPVGVAVDKDGNIAVVEQGNKRVQI----FDADTGQSLRSFPVDGEKPLGIDRPLF 169
Query: 105 VGPDNS---IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
V D S + V D S H+V F DG FGS G G+ ++P + V +IVS
Sbjct: 170 VSVDESRDVMYVTDKSAHKVFAFDLDGNLKFDFGSEGQNDGEFQNPEGVTVDQAGNIIVS 229
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSM--GNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
++ N RVQ VF DGTF K G++ G G +A+++ + + +
Sbjct: 230 NAGNGRVQ-------VFGPDGTFKRKVGTVQGGCACG-------LALTHDGHIAAAYDSA 275
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
H+V FD++G + FG EG G+ K P GV +D G I V G+ R+Q+F PDG F
Sbjct: 276 HKVFAFDLDGNQMFDFGKEGQNVGEFKSPEGVTLDTAGNIIVVSQGDGRLQMFGPDGTFK 335
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
R G+ G+ + +G I V HRI+ +
Sbjct: 336 RTVATVKGGN-----PHGIGLTPDGYIAVACFAGHRIERY 370
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 110/245 (44%), Gaps = 54/245 (22%)
Query: 118 NHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 177
HR++V D G G G+L+ P +AV + V + N RVQIFD +
Sbjct: 95 KHRLRVDTVDYRTEGYSG-----VGELDGPVGVAVDKDGNIAVVEQGNKRVQIFDAD--- 146
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI-VSDSNNHRVQIFDVNGRVITSFG 236
G + F G K ++ P +++V + V+ V+D + H+V FD++G + FG
Sbjct: 147 ---TGQSLRSFPVDGEKPLGIDRPLFVSVDESRDVMYVTDKSAHKVFAFDLDGNLKFDFG 203
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA--------------- 281
SEG +G+ + P GV VD G I V ++GN R+Q+F PDG F R
Sbjct: 204 SEGQNDGEFQNPEGVTVDQAGNIIVSNAGNGRVQVFGPDGTFKRKVGTVQGGCACGLALT 263
Query: 282 ---------------------------FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
FG G GEFK EGV + + GNI+V + +
Sbjct: 264 HDGHIAAAYDSAHKVFAFDLDGNQMFDFGKEGQNVGEFKSPEGVTLDTAGNIIVVSQGDG 323
Query: 315 RIQVF 319
R+Q+F
Sbjct: 324 RLQMF 328
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 12/185 (6%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWP 100
L+F GS G G F P G+ V +I+V+++ N RVQV P K +
Sbjct: 198 LKFDFGSEGQNDGEFQNPEGVTVDQAGNIIVSNAGNGRVQVFGPDGTFKRKVGTVQGGCA 257
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+A+ D I A S H+V F DG + FG G G+ + P + + +IV
Sbjct: 258 CGLALTHDGHIAAAYDSAHKVFAFDLDGNQMFDFGKEGQNVGEFKSPEGVTLDTAGNIIV 317
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+ R+Q+F DGTF ++ K G +PH I ++ + V+ H
Sbjct: 318 VSQGDGRLQMFG-------PDGTFKRTVATV--KGG---NPHGIGLTPDGYIAVACFAGH 365
Query: 221 RVQIF 225
R++ +
Sbjct: 366 RIERY 370
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRG 102
F G G G F P G+ + +I+V + R+Q+ P K + P G
Sbjct: 289 FDFGKEGQNVGEFKSPEGVTLDTAGNIIVVSQGDGRLQMFGPDGTFKRTVATVKGGNPHG 348
Query: 103 IAVGPDNSIVVADSSNHRVQVFQ 125
I + PD I VA + HR++ ++
Sbjct: 349 IGLTPDGYIAVACFAGHRIERYR 371
>gi|326321780|gb|ADZ53890.1| tripartite motif-containing protein 71 [Camelus bactrianus]
Length = 250
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 112/215 (52%), Gaps = 16/215 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 52 VVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI--- 96
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R+
Sbjct: 97 -ENSPFKVLVKSGRSYVGIGLPGLSFGSEGDGDGRLCRPWGVSVDKEGYIVVADRSNNRI 155
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FGS GS GQ P GVA D I V D N+RIQ+FT +GQFL F
Sbjct: 156 QVFKPCGAFHHKFGSLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLKF 215
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
G G+ +G+F VAV S G ILV D HRIQ
Sbjct: 216 GEKGTKNGQFNYPWDVAVSSEGKILVSDTSEHRIQ 250
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 81/124 (65%), Gaps = 7/124 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G++V + IVVAD SN+R+QVF+ G F KFGS+G++ GQ + P +A + R++
Sbjct: 134 PWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGSLGSRPGQFDRPAGVACDASRRIV 193
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+Q+F +G F+ KFG G K GQ +P +AVS+ +++VSD++
Sbjct: 194 VADKDNHRIQVFTF-------EGQFLLKFGEKGTKNGQFNYPWDVAVSSEGKILVSDTSE 246
Query: 220 HRVQ 223
HR+Q
Sbjct: 247 HRIQ 250
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 81/148 (54%), Gaps = 17/148 (11%)
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT----- 233
Q +GT+V + QLE H ++V+ N+ I N ++ +GR
Sbjct: 68 QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI----ENSPFKVLVKSGRSYVGIGLP 117
Query: 234 --SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
SFGSEG +G+L P GV+VD +GYI V D NNRIQ+F P G F FG GS G+
Sbjct: 118 GLSFGSEGDGDGRLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGSLGSRPGQ 177
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F GVA ++ I+V D++NHRIQVF
Sbjct: 178 FDRPAGVACDASRRIVVADKDNHRIQVF 205
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 119 LSFGSEGDGDGRLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGSLGSRPGQF 178
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+QVF +G F+ KFG G K GQ +P +AVS+ +
Sbjct: 179 DRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVSSEGK 238
Query: 158 VIVSDSNNHRVQ 169
++VSD++ HR+Q
Sbjct: 239 ILVSDTSEHRIQ 250
>gi|260792736|ref|XP_002591370.1| hypothetical protein BRAFLDRAFT_227409 [Branchiostoma floridae]
gi|229276575|gb|EEN47381.1| hypothetical protein BRAFLDRAFT_227409 [Branchiostoma floridae]
Length = 690
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 136/299 (45%), Gaps = 38/299 (12%)
Query: 25 GQVGTTPRSQYLQKRRLQ-FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF 83
G V +P +Q R IG G E G PR +AV D +I V + N RVQ+
Sbjct: 408 GSVAGSPFDVRVQSRVTPVLTIGREGDEEGELNLPRDVAVDMDGNIAVVEWGNKRVQI-- 465
Query: 84 PHFDLKTNCVFLAFT---W-PRGIAVGPDNSIVVA----DSSNHRVQVFQSDGTFVGKFG 135
FD +T F W P GI + + V+ + N ++V+ +G +
Sbjct: 466 --FDARTGQSLRCFPVDGWSPWGIDMDSNGQFVLTFGNYPTGNQAIRVYSREGKLIKTL- 522
Query: 136 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA 195
K L +P +AV R++V+D H + Q DG+ + G
Sbjct: 523 ----KPDCLWNPRGVAVLQDGRMVVADIRQHSCLLL-------QPDGSLIRDIGK----- 566
Query: 196 GQLEHPHYIAVSNT-NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
QL P +IAV + + + V+D HRV +FD+ G++ FG +G EG+L +P G+ VD
Sbjct: 567 EQLRDPRFIAVDESLDLLFVTDCEAHRVFVFDLEGQLKFMFGEQGRNEGKLYYPSGITVD 626
Query: 255 DQGYISVGDSGNNR-IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV-CDR 311
G I V + N R +Q+F PDG +LR GD G+A+ + +I V CDR
Sbjct: 627 PAGNIIVVNWFNRRLLQVFGPDGTYLRTVATVTGGDP-----RGIALTPDNHIAVTCDR 680
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 108/255 (42%), Gaps = 56/255 (21%)
Query: 116 SSNHRVQV---------------FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
+ NHR++V QS T V G G++ G+L P +AV + V
Sbjct: 396 TGNHRLEVKVNGGSVAGSPFDVRVQSRVTPVLTIGREGDEEGELNLPRDVAVDMDGNIAV 455
Query: 161 SDSNNHRVQIFDVN----------------GRVFQSDGTFVGKFGS--MGNKAGQ----- 197
+ N RVQIFD G S+G FV FG+ GN+A +
Sbjct: 456 VEWGNKRVQIFDARTGQSLRCFPVDGWSPWGIDMDSNGQFVLTFGNYPTGNQAIRVYSRE 515
Query: 198 -----------LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
L +P +AV R++V+D H + +G +I G E QL+
Sbjct: 516 GKLIKTLKPDCLWNPRGVAVLQDGRMVVADIRQHSCLLLQPDGSLIRDIGKE-----QLR 570
Query: 247 FPRGVAVDDQ-GYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
PR +AVD+ + V D +R+ +F +GQ FG G +G+ G+ V GN
Sbjct: 571 DPRFIAVDESLDLLFVTDCEAHRVFVFDLEGQLKFMFGEQGRNEGKLYYPSGITVDPAGN 630
Query: 306 ILVCDRENHR-IQVF 319
I+V + N R +QVF
Sbjct: 631 IIVVNWFNRRLLQVF 645
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRV-QVCFPHFDLKTNCVFLAFT 98
+L+F G +G G +P GI V P +I+V + N R+ QV P +
Sbjct: 602 QLKFMFGEQGRNEGKLYYPSGITVDPAGNIIVVNWFNRRLLQVFGPDGTYLRTVATVTGG 661
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
PRGIA+ PDN I V V++++
Sbjct: 662 DPRGIALTPDNHIAVTCDRGCCVELYR 688
>gi|291239955|ref|XP_002739887.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 1046
Score = 113 bits (283), Expect = 1e-22, Method: Composition-based stats.
Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 20/273 (7%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWP---RGIAVGPDN 109
G + P + + D +++V D N+R+Q+ K F F P R A D
Sbjct: 440 GKYNRPDSVLITSDWNVLVCDGGNNRLQLLTLDGKHKRMIQFTGFREPFNPRFAAESLDG 499
Query: 110 SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 169
+ + DS+N +V V ++ + FG+ QL HP I++S N RV
Sbjct: 500 NYFITDSNNKQVVVCNNNFELIRCFGNT-----QLTHPIGISISPVNE---------RVY 545
Query: 170 IFDVNG---RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
+ D+ R++ DG ++ FGS G+ + P I + VIV+D N R+Q+
Sbjct: 546 VVDLKSNCMRIYSQDGQYIKSFGSEGDWNCHFQSPFGITTDSKGNVIVADQCNRRIQVLT 605
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
G + FGS G+ QL+ P G+A D GY+ V ++GNNR+Q + GQF+
Sbjct: 606 GEGEFLFKFGSRGNVGTQLQCPLGLATDTDGYMYVSENGNNRVQKYDSHGQFVCHIDSPA 665
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G +G+ G ++V D +N+ I++F
Sbjct: 666 DGMMTPRGISLTNDKPFGKVVVADIKNNCIKIF 698
>gi|260785746|ref|XP_002587921.1| hypothetical protein BRAFLDRAFT_87309 [Branchiostoma floridae]
gi|229273076|gb|EEN43932.1| hypothetical protein BRAFLDRAFT_87309 [Branchiostoma floridae]
Length = 798
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 148/305 (48%), Gaps = 34/305 (11%)
Query: 25 GQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--- 81
G G T S +K+R+ G +GS+ G F +PRG+ V P N I V D N RVQV
Sbjct: 515 GTEGATSGSTGDRKQRV-ITFGGKGSKRGKFYYPRGVVVSPGNVIFVTDRYNRRVQVHST 573
Query: 82 ---CFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVAD---SSNHRVQVFQSDGTFVGKFG 135
HF P + + + ++ V S++H VQ + +DGT + +F
Sbjct: 574 DGVYLRHFSTVVPGTGDKDMSPHDVCMDGNGTLWVVGRGWSADHVVQ-YSTDGTVMARFD 632
Query: 136 SMGNKAGQLEHPHYIAVS-NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK 194
++ + IAV+ TN ++V+D++ V VF+ DG+ V ++ +
Sbjct: 633 QK-----KISYFRGIAVNMRTNHILVTDADQGAVH-------VFRPDGSLVR---TVQHP 677
Query: 195 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
G++ H Y+ V+ ++V+D H ++D +G+ + FG GS EGQL P G+ D
Sbjct: 678 EGKMIHQRYVTVNGEGNILVTDWGTHCAYVYDESGKFLFQFGGLGSGEGQLSGPYGICTD 737
Query: 255 DQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
G+I V DSGN RIQIFT G+F+R F+ E +AV ++V NH
Sbjct: 738 SSGHILVADSGNGRIQIFTRHGEFVRTVRTG------FQP-ECLAVGPEAQLVVTYNWNH 790
Query: 315 RIQVF 319
+ V+
Sbjct: 791 TVTVY 795
>gi|260792728|ref|XP_002591366.1| hypothetical protein BRAFLDRAFT_227411 [Branchiostoma floridae]
gi|229276571|gb|EEN47377.1| hypothetical protein BRAFLDRAFT_227411 [Branchiostoma floridae]
Length = 678
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 123/260 (47%), Gaps = 32/260 (12%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW----PRGIAV-GPDN 109
+P IAV D +I V + N RVQ+ FD KT F P GI + +
Sbjct: 429 LLYPNDIAVDMDGNIAVVERGNERVQI----FDAKTGQSLRCFPVDGGDPWGIDMDSSEQ 484
Query: 110 SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 169
IV + N +QV+ +G K+ L +P AV R++V+DS
Sbjct: 485 FIVTVQNVNQAIQVYSREGKLTKPL-----KSDYLRNPVGAAVLQDGRMVVADSEQQCCL 539
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI-VSDSNNHRVQIFDVN 228
+ Q DG+ + G G L++P YIAV + ++ V+D + H+V +FD+
Sbjct: 540 LL-------QPDGSLIRDIGK-----GHLQNPQYIAVDESRGLLFVTDYSTHKVFVFDLE 587
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G++ SFG G EG+L+ P G+ VD G I V + N R+Q+F PDG +LR G
Sbjct: 588 GKLKFSFGKVGENEGELEGPTGITVDPAGNIVVVNCDNGRLQVFGPDGTYLRTVATVKGG 647
Query: 289 DGEFKGLEGVAVMSNGNILV 308
D G+A+ + +ILV
Sbjct: 648 DP-----LGIALTPDNHILV 662
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 26/226 (11%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSD-GTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
+P IAV D +I V + N RVQ+F + G + F G P I + ++
Sbjct: 429 LLYPNDIAVDMDGNIAVVERGNERVQIFDAKTGQSLRCFPVDGGD------PWGIDMDSS 482
Query: 156 NRVIVSDSN-NHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ IV+ N N +Q++ G++ + K+ L +P AV R++V
Sbjct: 483 EQFIVTVQNVNQAIQVYSREGKLTKP------------LKSDYLRNPVGAAVLQDGRMVV 530
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIFT 273
+DS + +G +I G +G L+ P+ +AVD+ +G + V D +++ +F
Sbjct: 531 ADSEQQCCLLLQPDGSLIRDIG-----KGHLQNPQYIAVDESRGLLFVTDYSTHKVFVFD 585
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G+ +FG G +GE +G G+ V GNI+V + +N R+QVF
Sbjct: 586 LEGKLKFSFGKVGENEGELEGPTGITVDPAGNIVVVNCDNGRLQVF 631
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 36/75 (48%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+L+F G G G P GI V P +IVV + N R+QV P +
Sbjct: 589 KLKFSFGKVGENEGELEGPTGITVDPAGNIVVVNCDNGRLQVFGPDGTYLRTVATVKGGD 648
Query: 100 PRGIAVGPDNSIVVA 114
P GIA+ PDN I+VA
Sbjct: 649 PLGIALTPDNHILVA 663
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 31/195 (15%)
Query: 115 DSSNHRVQVFQSDGTFVGKFGSMGNKAG--QLEHPHYIAVSNTN----RVIVSDSNNHRV 168
D + QV S+GT V +F +AG Q+ H + VS + +V SN +
Sbjct: 277 DLTARPSQVVFSEGTAVAEFRDDVARAGRVQVRHTGKMDVSECSVEIKPAVVESSNFSLL 336
Query: 169 QIFDVNGR--VFQSD---GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
D GR V D T G Q + +S + V + NHR++
Sbjct: 337 STMDETGRPCVVPKDDVTATLTDPSGQAVPTQLQEKGRGLWEISYSPEV----TGNHRLE 392
Query: 224 I-----------FDVNGRV----ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
+ FDV + + + G EG+ EG+L +P +AVD G I+V + GN R
Sbjct: 393 VKVNLMSVAGSPFDVTVQSRDTPVLTIGEEGNGEGELLYPNDIAVDMDGNIAVVERGNER 452
Query: 269 IQIF-TPDGQFLRAF 282
+QIF GQ LR F
Sbjct: 453 VQIFDAKTGQSLRCF 467
>gi|260785776|ref|XP_002587936.1| hypothetical protein BRAFLDRAFT_87324 [Branchiostoma floridae]
gi|229273091|gb|EEN43947.1| hypothetical protein BRAFLDRAFT_87324 [Branchiostoma floridae]
Length = 705
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 131/268 (48%), Gaps = 26/268 (9%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTW 99
G GS+PG F P G+ V P N I VAD +N RVQV HF
Sbjct: 433 GGEGSKPGKFQSPLGVVVSPSNEIFVADRNNRRVQVHSTEGVYLRHFPTVVPGAGDKDMG 492
Query: 100 PRGIAVGPDNSIVVAD---SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 155
P + + + ++ V S++H VQ + +DGT + F ++ + IAV T
Sbjct: 493 PYDVCMDGNGTLWVVGEGGSADHVVQ-YSTDGTAMAGF-----DLKKIRYSRGIAVDMRT 546
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
N ++V+D + V VF+ DG+ V ++ + G++ P Y+ V ++V+
Sbjct: 547 NHILVTDVDQVEVH-------VFRPDGSLVR---TVRHPRGKITRPRYVTVDGEGNILVT 596
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D N+ V ++D +G+ + FG +GS EGQL P G+ D G I V DS N R+QIFT
Sbjct: 597 DWYNNYVYVYDESGKFLFQFGGKGSGEGQLSGPAGICTDSSGNILVADSWNRRVQIFTRH 656
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
G+F+R F + G EG V++N
Sbjct: 657 GEFVRTFRTRFKPEYLAVGPEGQLVVTN 684
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 113/228 (49%), Gaps = 21/228 (9%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G+ V P N I VAD +N RVQV ++G ++ F ++ AG + Y + N
Sbjct: 442 FQSPLGVVVSPSNEIFVADRNNRRVQVHSTEGVYLRHFPTVVPGAGDKDMGPYDVCMDGN 501
Query: 157 RVI----VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNR 211
+ S +H VQ + +DGT + F ++ + IAV TN
Sbjct: 502 GTLWVVGEGGSADHVVQ--------YSTDGTAMAGF-----DLKKIRYSRGIAVDMRTNH 548
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D + V +F +G ++ + G++ PR V VD +G I V D NN + +
Sbjct: 549 ILVTDVDQVEVHVFRPDGSLVRTVRHP---RGKITRPRYVTVDGEGNILVTDWYNNYVYV 605
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ G+FL FG GSG+G+ G G+ S+GNILV D N R+Q+F
Sbjct: 606 YDESGKFLFQFGGKGSGEGQLSGPAGICTDSSGNILVADSWNRRVQIF 653
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW--GSGD 289
+ +FG EGS+ G+ + P GV V I V D N R+Q+ + +G +LR F G+GD
Sbjct: 429 VVTFGGEGSKPGKFQSPLGVVVSPSNEIFVADRNNRRVQVHSTEGVYLRHFPTVVPGAGD 488
Query: 290 GEFKGLEGVAVMSNGNILVC 309
+ G V + NG + V
Sbjct: 489 KDM-GPYDVCMDGNGTLWVV 507
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G +GS G + P GI +I+VADS N RVQ+ H + F
Sbjct: 606 YDESGKFLFQFGGKGSGEGQLSGPAGICTDSSGNILVADSWNRRVQIFTRHGEFVR--TF 663
Query: 95 LAFTWPRGIAVGPDNSIVVAD 115
P +AVGP+ +VV +
Sbjct: 664 RTRFKPEYLAVGPEGQLVVTN 684
>gi|326321776|gb|ADZ53888.1| tripartite motif-containing protein 71 [Hippopotamus amphibius]
Length = 250
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 52 VVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI--- 96
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R+
Sbjct: 97 -ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDGDGKLCRPWGVSVDKEGYIVVADRSNNRI 155
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQ+FT +GQFL F
Sbjct: 156 QVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLKF 215
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
G G+ +G+F VAV S G ILV D NHRIQ
Sbjct: 216 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQ 250
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 81/124 (65%), Gaps = 7/124 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G++V + IVVAD SN+R+QVF+ G F KFG++G++ GQ + P +A + R++
Sbjct: 134 PWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIV 193
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+Q+F +G F+ KFG G K GQ +P +AV++ +++VSD+ N
Sbjct: 194 VADKDNHRIQVFTF-------EGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRN 246
Query: 220 HRVQ 223
HR+Q
Sbjct: 247 HRIQ 250
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 119 LSFGSEGDGDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 178
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+QVF +G F+ KFG G K GQ +P +AV++ +
Sbjct: 179 DRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 238
Query: 158 VIVSDSNNHRVQ 169
++VSD+ NHR+Q
Sbjct: 239 ILVSDTRNHRIQ 250
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 81/148 (54%), Gaps = 17/148 (11%)
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT----- 233
Q +GT+V + QLE H ++V+ N+ I N ++ +GR
Sbjct: 68 QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI----ENSPFKVVVKSGRSYVGIGLP 117
Query: 234 --SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
SFGSEG +G+L P GV+VD +GYI V D NNRIQ+F P G F FG GS G+
Sbjct: 118 GLSFGSEGDGDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQ 177
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F GVA ++ I+V D++NHRIQVF
Sbjct: 178 FDRPAGVACDASRRIVVADKDNHRIQVF 205
>gi|260782180|ref|XP_002586169.1| hypothetical protein BRAFLDRAFT_255134 [Branchiostoma floridae]
gi|229271262|gb|EEN42180.1| hypothetical protein BRAFLDRAFT_255134 [Branchiostoma floridae]
Length = 215
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 109/208 (52%), Gaps = 16/208 (7%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 155
F PRG+ V P N I V D N RVQV ++G +V F ++ ++++ IAV+ T
Sbjct: 11 FRDPRGVVVSPSNEIFVTDLYNRRVQVHSTEGVYVRHFPTV-----KIDYDRGIAVNMRT 65
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
N ++V+D V +F +G + ++ + + ++ P YI V ++VS
Sbjct: 66 NHILVTDPEQREVHVFRPDGSLLRT----------VRHPRDEMTRPTYITVDGEGNILVS 115
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D ++ V ++ +G+ + FG EGS +GQ+ PRG+ D G+I V D GN RIQIFT
Sbjct: 116 DGRSNSVYVYGESGKFLFQFGGEGSGQGQMSDPRGICTDSSGHILVADYGNERIQIFTRH 175
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
G+F+R G G EG V+++
Sbjct: 176 GEFVRTVRTGSRPTGLAVGPEGQLVVTS 203
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 111/231 (48%), Gaps = 18/231 (7%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAV 105
G GS+PG F PRG+ V P N I V D N RVQV + + + RGIAV
Sbjct: 2 GGYGSKPGKFRDPRGVVVSPSNEIFVTDLYNRRVQVHSTEGVYVRHFPTVKIDYDRGIAV 61
Query: 106 G-PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 164
N I+V D V VF+ DG+ + ++ + ++ P YI V ++VSD
Sbjct: 62 NMRTNHILVTDPEQREVHVFRPDGSLL---RTVRHPRDEMTRPTYITVDGEGNILVSDGR 118
Query: 165 NHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 224
++ V ++ +G+ F+ +FG G+ GQ+ P I ++ ++V+D N R+QI
Sbjct: 119 SNSVYVYGESGK-------FLFQFGGEGSGQGQMSDPRGICTDSSGHILVADYGNERIQI 171
Query: 225 FDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
F +G + + + GS P G+AV +G + V + + ++ D
Sbjct: 172 FTRHGEFVRTVRT-GSR------PTGLAVGPEGQLVVTSYWCDNVTVYPND 215
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 16/187 (8%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G+K G+ P + VS +N + V+D N RVQ V ++G +V F ++
Sbjct: 1 FGGYGSKPGKFRDPRGVVVSPSNEIFVTDLYNRRVQ-------VHSTEGVYVRHFPTV-- 51
Query: 194 KAGQLEHPHYIAVS-NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
++++ IAV+ TN ++V+D V +F +G ++ + E + P +
Sbjct: 52 ---KIDYDRGIAVNMRTNHILVTDPEQREVHVFRPDGSLLRTVRHPRDE---MTRPTYIT 105
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRE 312
VD +G I V D +N + ++ G+FL FG GSG G+ G+ S+G+ILV D
Sbjct: 106 VDGEGNILVSDGRSNSVYVYGESGKFLFQFGGEGSGQGQMSDPRGICTDSSGHILVADYG 165
Query: 313 NHRIQVF 319
N RIQ+F
Sbjct: 166 NERIQIF 172
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G GS G + PRGI I+VAD N R+Q+ H +
Sbjct: 125 YGESGKFLFQFGGEGSGQGQMSDPRGICTDSSGHILVADYGNERIQIFTRHGEFVRTV-- 182
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSD 127
+ P G+AVGP+ +VV V V+ +D
Sbjct: 183 RTGSRPTGLAVGPEGQLVVTSYWCDNVTVYPND 215
>gi|291239957|ref|XP_002739888.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 734
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 134/277 (48%), Gaps = 30/277 (10%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWP---RGIAVGPDN 109
G + P + + D +++V D N+R+Q+ K F F P R A D
Sbjct: 476 GKYNRPDSVLITSDGNVLVCDGGNNRLQLLTLDGQHKRMIQFTGFREPFNPRFAAESRDG 535
Query: 110 SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI-VSDSNNHRV 168
+ + DS+N +V V ++ + FG+ QL HP I++S N ++ V D +H +
Sbjct: 536 NYFITDSNNKQVVVCNNNFELIRCFGNT-----QLGHPIGISISPVNEIVYVVDQRSHCI 590
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
RV+ DG ++ FGS G + P I + VIV D +NHR+Q+ +
Sbjct: 591 -------RVYSQDGQYIKSFGSEGVWDCHFQSPFGITTDSKGNVIVVDQSNHRIQVLTGD 643
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G+ + FGS G L +P GVA D GY+ V ++GNNR+Q + GQF+
Sbjct: 644 GKFLFKFGSSGY--SGLNYPLGVATDTDGYVYVSENGNNRVQKYDCHGQFVCRI------ 695
Query: 289 DGEFKGL---EGVAVMSN---GNILVCDRENHRIQVF 319
D GL G+ V ++ G ++V D+EN+ I++F
Sbjct: 696 DSHVDGLMTPRGICVTNDKPFGKVVVADKENNCIKIF 732
>gi|290971724|ref|XP_002668632.1| predicted protein [Naegleria gruberi]
gi|284082112|gb|EFC35888.1| predicted protein [Naegleria gruberi]
Length = 295
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 140/280 (50%), Gaps = 14/280 (5%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIV-VADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGI 103
IGS GS+ G F P +A+ N ++ V D+ N R+QV F L +F P +
Sbjct: 22 IGSYGSQNGQFKNPSDVAIDFKNQLIFVVDTDNRRIQV-FDESTLTFKYMFTTPFKPNAV 80
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 163
V D++++++ + + + + +G + ++G + K ++ P + V + V D
Sbjct: 81 TVHWDHTLIISFTRDSLICKYDFNGNEIWRWGGVTTK-NVMDSPTGVVVDYEGNIYVCDW 139
Query: 164 NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
HR+ +F G + +S GSMG + GQ P I + + +I+SDS N+R+Q
Sbjct: 140 FKHRIVVFSPGGELLKS-------IGSMGKEYGQFSFPRDIDIDSAGNIIISDSGNNRIQ 192
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ-GYISVGDSGNNRIQIFTPDGQF--LR 280
I NG I+SFGS G+++G+ + P V VD G I + + ++RI F P+ F
Sbjct: 193 ILKSNGEFISSFGSIGNDKGEFQAPNSVFVDKSTGDIFLTEWDSHRISKFHPNNPFSGST 252
Query: 281 AFGCWGSGDGEFKGLEGVA-VMSNGNILVCDRENHRIQVF 319
G +G+ + K G+A + + + D N+RI+V+
Sbjct: 253 CIGSFGNHENSLKYPSGIAFCYGSSRLFIVDTGNNRIKVY 292
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 114/230 (49%), Gaps = 35/230 (15%)
Query: 125 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI-VSDSNNHRVQIFDVNGRVFQ---- 179
QS+ +G GS G++ GQ ++P +A+ N++I V D++N R+Q+FD + F+
Sbjct: 13 QSEFELIGCIGSYGSQNGQFKNPSDVAIDFKNQLIFVVDTDNRRIQVFDESTLTFKYMFT 72
Query: 180 --------------------SDGTFVGKFGSMGNKAGQ---------LEHPHYIAVSNTN 210
+ + + K+ GN+ + ++ P + V
Sbjct: 73 TPFKPNAVTVHWDHTLIISFTRDSLICKYDFNGNEIWRWGGVTTKNVMDSPTGVVVDYEG 132
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
+ V D HR+ +F G ++ S GS G E GQ FPR + +D G I + DSGNNRIQ
Sbjct: 133 NIYVCDWFKHRIVVFSPGGELLKSIGSMGKEYGQFSFPRDIDIDSAGNIIISDSGNNRIQ 192
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAV-MSNGNILVCDRENHRIQVF 319
I +G+F+ +FG G+ GEF+ V V S G+I + + ++HRI F
Sbjct: 193 ILKSNGEFISSFGSIGNDKGEFQAPNSVFVDKSTGDIFLTEWDSHRISKF 242
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 49/190 (25%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
L IGS G E G F++PR I + +I+++DS N+R+
Sbjct: 152 ELLKSIGSMGKEYGQFSFPRDIDIDSAGNIIISDSGNNRI-------------------- 191
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRV 158
Q+ +S+G F+ FGS+GN G+ + P+ + V +T +
Sbjct: 192 ----------------------QILKSNGEFISSFGSIGNDKGEFQAPNSVFVDKSTGDI 229
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDS 217
+++ ++HR+ F N S T +G F GN L++P IA ++R+ + D+
Sbjct: 230 FLTEWDSHRISKFHPNNPF--SGSTCIGSF---GNHENSLKYPSGIAFCYGSSRLFIVDT 284
Query: 218 NNHRVQIFDV 227
N+R++++ V
Sbjct: 285 GNNRIKVYRV 294
>gi|291239183|ref|XP_002739511.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 735
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 140/287 (48%), Gaps = 25/287 (8%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV-FLAFTW 99
L K G +GS G F +G+ V + V D N RVQ+ F + + + F FT
Sbjct: 464 LLCKYGIKGSGVGQFRNIQGVRVFGNGVTAVCDKGNKRVQL-FSLYGIHQRVIQFTTFTS 522
Query: 100 ---PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
PR +AV + + D+ N +V V + + FG+ +L P IA+S TN
Sbjct: 523 GFDPRHVAVSKEGYYFITDNRNKQVVVCDENSKIIRCFGNQ-----ELGCPDGIAISPTN 577
Query: 157 -RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
RV V D+++H + R++ DG +V FGS GN + +P+ + ++N VIV+
Sbjct: 578 GRVYVCDNSSHCI-------RIYTQDGDYVKSFGSFGNGQCEFSNPYGMTINNKGNVIVA 630
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
+ N HR+Q+ D +G + SFGS+G+ Q P VA D+ G + V D N+R+ +
Sbjct: 631 EYN-HRIQVCDSDGVFLFSFGSQGNGNNQFNCPYDVACDNDGNMYVCDCFNHRVMKYDSH 689
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSN---GNILVCDRENHRIQVF 319
G FL G L GV V + G ++V D N+ I+VF
Sbjct: 690 GVFLSRIDSDQDG---LNNLTGVCVTDDKPFGKVVVADHGNNCIKVF 733
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + P+ L +G GSG G+F+ ++GV V NG VCD+ N R+Q+F
Sbjct: 450 EGSPTVITIIPNKGLLCKYGIKGSGVGQFRNIQGVRVFGNGVTAVCDKGNKRVQLF 505
>gi|291242104|ref|XP_002740948.1| PREDICTED: MGC82029 protein-like [Saccoglossus kowalevskii]
Length = 345
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 122/234 (52%), Gaps = 22/234 (9%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGK--FGSMGNKAGQLEHPHYIAVSNTN- 156
P+ +A+ + ++VADS N R+Q+F G + S+ K P +AV+ +
Sbjct: 118 PQSVAMVGKDRVIVADSKN-RLQIFSRYGKYKDTITLSSLDKKC----VPRCLAVATSTG 172
Query: 157 --RVIVSDSNNHRVQIFDVNGRVFQSDGT---------FVGKFGSMGNKAGQLEHPHYIA 205
V VSD NN RV ++ G + + G + G +G+ L P +IA
Sbjct: 173 EGVVYVSDMNNKRVWGCNLKGEIVKEIGKDNLSMPREHVPRRVGGLGDGESGLCQPTHIA 232
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG 265
V+ ++V+D++N+R+QIFD GR + FG +G +G+ P G+A+D G I V DS
Sbjct: 233 VNKCGELVVADTHNYRIQIFDSYGRCVRRFGRKGVGDGEFLCPSGIAIDRFGNIIVADSS 292
Query: 266 NNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
RIQ+FT G+F+R GDG K EGV++ +G + V D +H ++VF
Sbjct: 293 ARRIQMFTYWGRFIRRID--KDGDG-LKYPEGVSIAGDGAVYVADAGSHSVKVF 343
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 134/282 (47%), Gaps = 35/282 (12%)
Query: 14 FLLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVAD 73
F L+ + + + T + + +K F+ G +GS G P+ +A+ + ++VAD
Sbjct: 74 FSASILITNLLEYLRTNVKDERERKTGFLFQFGEKGSSDGQLYKPQSVAMVGKDRVIVAD 133
Query: 74 SSNHRVQVCFPHFDLKTNCVFLAF----TWPRGIAVGP---DNSIVVADSSNHRVQVFQS 126
S N R+Q+ F + + + L+ PR +AV + + V+D +N RV
Sbjct: 134 SKN-RLQI-FSRYGKYKDTITLSSLDKKCVPRCLAVATSTGEGVVYVSDMNNKRVWGCNL 191
Query: 127 DGTFVGKFGS----------------MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
G V + G +G+ L P +IAV+ ++V+D++N+R+QI
Sbjct: 192 KGEIVKEIGKDNLSMPREHVPRRVGGLGDGESGLCQPTHIAVNKCGELVVADTHNYRIQI 251
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
FD GR V +FG G G+ P IA+ +IV+DS+ R+Q+F GR
Sbjct: 252 FDSYGRC-------VRRFGRKGVGDGEFLCPSGIAIDRFGNIIVADSSARRIQMFTYWGR 304
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
I +G LK+P GV++ G + V D+G++ +++F
Sbjct: 305 FIRRIDKDGD---GLKYPEGVSIAGDGAVYVADAGSHSVKVF 343
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWPR 101
+ G +G G F P GIA+ +I+VADSS R+Q+ + F + + +P
Sbjct: 261 RFGRKGVGDGEFLCPSGIAIDRFGNIIVADSSARRIQMFTYWGRFIRRIDKDGDGLKYPE 320
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQ 125
G+++ D ++ VAD+ +H V+VFQ
Sbjct: 321 GVSIAGDGAVYVADAGSHSVKVFQ 344
>gi|260785682|ref|XP_002587889.1| hypothetical protein BRAFLDRAFT_87276 [Branchiostoma floridae]
gi|229273044|gb|EEN43900.1| hypothetical protein BRAFLDRAFT_87276 [Branchiostoma floridae]
Length = 811
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 139/284 (48%), Gaps = 35/284 (12%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTW 99
G GSEPG F++PRG+ V P N I VAD +N RVQV HF W
Sbjct: 550 GGEGSEPGRFSFPRGVVVSPSNEIFVADINNRRVQVHSTEGVYLRHFLTVVPGTGDKDMW 609
Query: 100 PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 155
P + + + ++ V ++ H VQ + +DGT + F + N + IAV T
Sbjct: 610 PHDVCMDGNGTLWVVGQGETDGHVVQ-YSTDGTVMAGF-DIKNSSDY----RGIAVDMRT 663
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
N ++V+D++ V VF+ DG+ V ++ + G++ +PHY+ V ++V
Sbjct: 664 NHILVTDADQGTV-------LVFRPDGSLVR---TVRHPEGEMTNPHYVTVGGEGNILVL 713
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D N++ V + D +G+ + FG G+ EGQL P + D G+I V D G RIQIFT
Sbjct: 714 DYNSNSVYVNDESGKFLFQFGGWGTGEGQLVSPHDICTDSSGHILVADYG--RIQIFTRH 771
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F+R G G+AV G ++V +H + ++
Sbjct: 772 GEFVRTVRI-----GTVP--RGLAVGPEGQLVVTSYSDHTVAIY 808
>gi|260785748|ref|XP_002587922.1| hypothetical protein BRAFLDRAFT_87310 [Branchiostoma floridae]
gi|229273077|gb|EEN43933.1| hypothetical protein BRAFLDRAFT_87310 [Branchiostoma floridae]
Length = 1494
Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats.
Identities = 80/253 (31%), Positives = 113/253 (44%), Gaps = 55/253 (21%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS---------MGNK------- 140
F +PRG+ V P N I VAD+ N RVQV ++G ++ F + MG
Sbjct: 1239 FNYPRGVVVSPSNEIFVADTDNRRVQVHSTEGVYLRHFPTVVPSKGGYYMGPHDVCMDGS 1298
Query: 141 -----AGQLEHPHY------------------------IAVS-NTNRVIVSDSNNHRVQI 170
GQ E HY IAV TN ++V+D +N V
Sbjct: 1299 GTLWVVGQGETAHYVVQYSTDGTAMAGFDLEKIGYSRRIAVGMRTNHILVTDPDNAAVH- 1357
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VF+ DG+ V + G++ P Y V ++VSD + H V ++D G+
Sbjct: 1358 ------VFRPDGSLVRTVRH--PRGGEMTRPTYATVDGEGNILVSDWDTHCVYVYDEFGK 1409
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+ FG EGS EGQL P G+ D G+I V D GN +QIFT G+F+R +G
Sbjct: 1410 FLFQFGVEGSGEGQLSAPCGICTDSSGHILVADYGNKSVQIFTRHGEFVRTVRTGFRPEG 1469
Query: 291 EFKGLEGVAVMSN 303
G EG V+++
Sbjct: 1470 LAVGPEGQLVVNS 1482
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 21/191 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG-QLEHPHYIAVSNT 155
F++PRG+ V P N I VA+ N RVQ ++G ++ F ++ G ++ PH + +
Sbjct: 505 FSYPRGVVVSPSNEIFVAEKDNKRVQANSTEGVYLRHFPTVVPGTGDKVMEPHDVCMDGN 564
Query: 156 NRVIVSDSN---NHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNR 211
+ V +H VQ + + GT + G + + + IAV+ TN
Sbjct: 565 GTLWVVGGGKIADHVVQ--------YSTGGTAMA-----GIELKKGSYDRGIAVNMRTNH 611
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V+D + +F +G ++ + + LK P V VD +G I V D G + +
Sbjct: 612 ILVTDCDQGEFHVFRPDGSLVRTVRHP---QAGLKRPGYVTVDGEGNILVSDWGRKSVSL 668
Query: 272 FTPDGQFLRAF 282
+ G+FL F
Sbjct: 669 YDESGKFLFWF 679
Score = 60.8 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 26/200 (13%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ------VCFPHFDLKTNCVFLAFTW 99
G GS PG F++PRG+ V P N I VA+ N RVQ V HF
Sbjct: 496 GGEGSVPGKFSYPRGVVVSPSNEIFVAEKDNKRVQANSTEGVYLRHFPTVVPGTGDKVME 555
Query: 100 PRGIAVGPDNSIVVADS---SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 155
P + + + ++ V ++H VQ + + GT + G + + + IAV+ T
Sbjct: 556 PHDVCMDGNGTLWVVGGGKIADHVVQ-YSTGGTAMA-----GIELKKGSYDRGIAVNMRT 609
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
N ++V+D + VF+ DG+ V ++ + L+ P Y+ V ++VS
Sbjct: 610 NHILVTDCDQGEFH-------VFRPDGSLV---RTVRHPQAGLKRPGYVTVDGEGNILVS 659
Query: 216 DSNNHRVQIFDVNGRVITSF 235
D V ++D +G+ + F
Sbjct: 660 DWGRKSVSLYDESGKFLFWF 679
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 65/146 (44%), Gaps = 11/146 (7%)
Query: 57 WPRGIAVG-PDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---AFTWPRGIAVGPDNSIV 112
+ R IAVG N I+V D N V V P L T P V + +I+
Sbjct: 1333 YSRRIAVGMRTNHILVTDPDNAAVHVFRPDGSLVRTVRHPRGGEMTRPTYATVDGEGNIL 1392
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 172
V+D H V V+ G F+ +FG G+ GQL P I ++ ++V+D N VQIF
Sbjct: 1393 VSDWDTHCVYVYDEFGKFLFQFGVEGSGEGQLSAPCGICTDSSGHILVADYGNKSVQIFT 1452
Query: 173 VNGRV-------FQSDGTFVGKFGSM 191
+G F+ +G VG G +
Sbjct: 1453 RHGEFVRTVRTGFRPEGLAVGPEGQL 1478
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
+ +FG +GSE G+ +PRGV V I V D+ N R+Q+ + +G +LR F
Sbjct: 1226 VVTFGGKGSEPGKFNYPRGVVVSPSNEIFVADTDNRRVQVHSTEGVYLRHF 1276
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 183 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS-EGSE 241
T V FG G++ G+ +P + VS +N + V+D++N RVQ+ G + F + S+
Sbjct: 1224 TGVVTFGGKGSEPGKFNYPRGVVVSPSNEIFVADTDNRRVQVHSTEGVYLRHFPTVVPSK 1283
Query: 242 EGQLKFPRGVAVDDQGYISV---GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL-EG 297
G P V +D G + V G++ + +Q ++ DG + F D E G
Sbjct: 1284 GGYYMGPHDVCMDGSGTLWVVGQGETAHYVVQ-YSTDGTAMAGF------DLEKIGYSRR 1336
Query: 298 VAV-MSNGNILVCDRENHRIQVF 319
+AV M +ILV D +N + VF
Sbjct: 1337 IAVGMRTNHILVTDPDNAAVHVF 1359
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 49/184 (26%), Positives = 76/184 (41%), Gaps = 19/184 (10%)
Query: 131 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGS 190
V FG G+ G+ +P + VS +N + V++ +N RVQ G + T V G
Sbjct: 492 VVSFGGEGSVPGKFSYPRGVVVSPSNEIFVAEKDNKRVQANSTEGVYLRHFPTVVPGTGD 551
Query: 191 MGNKAGQLEHPHYIAVSNTNRVIVSDSN---NHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
++ PH + + + V +H VQ + G + G E + +
Sbjct: 552 ------KVMEPHDVCMDGNGTLWVVGGGKIADHVVQ-YSTGGTAMA-----GIELKKGSY 599
Query: 248 PRGVAVDDQ-GYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNI 306
RG+AV+ + +I V D +F PDG +R +G K V V GNI
Sbjct: 600 DRGIAVNMRTNHILVTDCDQGEFHVFRPDGSLVRTVRHPQAG---LKRPGYVTVDGEGNI 656
Query: 307 LVCD 310
LV D
Sbjct: 657 LVSD 660
Score = 43.9 bits (102), Expect = 0.11, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ F+ G GS G + P GI I+VAD N VQ+ H + V F
Sbjct: 1409 KFLFQFGVEGSGEGQLSAPCGICTDSSGHILVADYGNKSVQIFTRHGEF-VRTVRTGFR- 1466
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQS 126
P G+AVGP+ +VV N V V+ S
Sbjct: 1467 PEGLAVGPEGQLVVNSYLNDIVTVYPS 1493
>gi|260785756|ref|XP_002587926.1| hypothetical protein BRAFLDRAFT_87314 [Branchiostoma floridae]
gi|229273081|gb|EEN43937.1| hypothetical protein BRAFLDRAFT_87314 [Branchiostoma floridae]
Length = 752
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 121/266 (45%), Gaps = 61/266 (22%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE-HPHYIAVS----- 153
PRG+ V P N I VAD N RVQV ++G ++ F ++ AG + PH + +
Sbjct: 499 PRGVVVSPSNEIFVADELNRRVQVHSTEGVYLRHFPTVVPGAGDKDMEPHDVCMDGNGTL 558
Query: 154 ----------------------------------------NTNRVIVSDSNNHRVQIFDV 173
TN ++V+D ++ V
Sbjct: 559 WVVGRGKTAHHVVQYSTDGTAMAGFDMKKSIYFRGITVDMRTNHILVTDCDHGEVD---- 614
Query: 174 NGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT 233
VF+ DG+ V ++ + G++ HP Y+ V ++VSD NN+ ++D +G+ +
Sbjct: 615 ---VFRPDGSLVR---TVRHHEGEMTHPRYVTVDGDGNILVSDWNNYNYYVYDESGKFLF 668
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
FG GS EGQL P G+ D G+I V D GN RIQIFT G+F R GSG G
Sbjct: 669 QFGGLGSGEGQLNRPAGICTDSSGHILVADYGNERIQIFTRHGEFARTVRT-GSGSGP-- 725
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
EG+AV G +++ + N + V+
Sbjct: 726 --EGLAVGPEGQLVMTNSLNDIVTVY 749
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 97/231 (41%), Gaps = 44/231 (19%)
Query: 129 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKF 188
T V FG G + G+L P + VS +N + V+D N RVQ+ G + T V
Sbjct: 481 TGVITFGGFGKEPGELRDPRGVVVSPSNEIFVADELNRRVQVHSTEGVYLRHFPTVVPGA 540
Query: 189 GSMGNKA----------------GQLEHPHYIAVSN------------------------ 208
G + G+ H H + S
Sbjct: 541 GDKDMEPHDVCMDGNGTLWVVGRGKTAH-HVVQYSTDGTAMAGFDMKKSIYFRGITVDMR 599
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
TN ++V+D ++ V +F +G ++ + EG++ PR V VD G I V D N
Sbjct: 600 TNHILVTDCDHGEVDVFRPDGSLVRTV---RHHEGEMTHPRYVTVDGDGNILVSDWNNYN 656
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++ G+FL FG GSG+G+ G+ S+G+ILV D N RIQ+F
Sbjct: 657 YYVYDESGKFLFQFGGLGSGEGQLNRPAGICTDSSGHILVADYGNERIQIF 707
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G GS G P GI I+VAD N R+Q+ H +
Sbjct: 660 YDESGKFLFQFGGLGSGEGQLNRPAGICTDSSGHILVADYGNERIQIFTRHGEFARTVRT 719
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
+ + P G+AVGP+ +V+ +S N V V+ S
Sbjct: 720 GSGSGPEGLAVGPEGQLVMTNSLNDIVTVYPS 751
>gi|159900380|ref|YP_001546627.1| NHL repeat-containing protein [Herpetosiphon aurantiacus DSM 785]
gi|159893419|gb|ABX06499.1| NHL repeat containing protein [Herpetosiphon aurantiacus DSM 785]
Length = 1177
Score = 112 bits (280), Expect = 3e-22, Method: Composition-based stats.
Identities = 88/308 (28%), Positives = 139/308 (45%), Gaps = 61/308 (19%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV----FLAFTWPRGIA 104
G EP PRGIA GPD S+ +AD+ N+R+ V D +T + A P G+A
Sbjct: 884 GDEPA---EPRGIATGPDGSVYIADAPNNRILVY--QTDSQTRIISGTNTGALLEPSGVA 938
Query: 105 VGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS--------------------MGNKAGQL 144
V + VAD+ N R+ F G FV +GS GN A L
Sbjct: 939 VDEQGFVYVADTWNARIAKFNPQGNFVTSWGSGSEELQPGSGKRLTRTGGTTEGNSANPL 998
Query: 145 EH--PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
P + VS RV ++D+ N RV + D +DG ++G+ G+ G GQ P
Sbjct: 999 GFFGPRNLVVS-AGRVYIADTGNKRVVVTD-------TDGNYLGQVGTAGAGIGQFNEPI 1050
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG--QLKFPRG---------- 250
+ ++N N + V D+ N R+Q+F ++ + G +G +++P
Sbjct: 1051 GLGIANNN-LYVGDTWNGRIQVFPLD--------ANGVPQGVPSVQWPVAGWQTDTYLDP 1101
Query: 251 -VAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+AVD QG ++ N++ ++ GQ L +G G+ D G+A +G++ V
Sbjct: 1102 FIAVDSQGRVAAAIPSKNQVALYGATGQLLLVWGGQGNDDASTGQPSGMAFAPDGSVYVS 1161
Query: 310 DRENHRIQ 317
++ N RIQ
Sbjct: 1162 EKANRRIQ 1169
Score = 74.7 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 36/196 (18%)
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
P IA V ++D+ N+R+ ++ + + GT G L P +AV
Sbjct: 890 PRGIATGPDGSVYIADAPNNRILVYQTDSQTRIISGT----------NTGALLEPSGVAV 939
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQ---------------------L 245
V V+D+ N R+ F+ G +TS+GS GSEE Q L
Sbjct: 940 DEQGFVYVADTWNARIAKFNPQGNFVTSWGS-GSEELQPGSGKRLTRTGGTTEGNSANPL 998
Query: 246 KF--PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
F PR + V G + + D+GN R+ + DG +L G G+G G+F G+ + +N
Sbjct: 999 GFFGPRNLVVS-AGRVYIADTGNKRVVVTDTDGNYLGQVGTAGAGIGQFNEPIGLGI-AN 1056
Query: 304 GNILVCDRENHRIQVF 319
N+ V D N RIQVF
Sbjct: 1057 NNLYVGDTWNGRIQVF 1072
>gi|443707909|gb|ELU03293.1| hypothetical protein CAPTEDRAFT_181303 [Capitella teleta]
Length = 222
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 102/181 (56%), Gaps = 15/181 (8%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +AV +VVAD +++++ + +G + M P+ IAV +T V+
Sbjct: 6 PTSLAVLNSGKVVVADYNHNQLLFYNKEGEIEFQLDGM--------KPYSIAVDHTGNVL 57
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D N V ++F G + +FGS G + QL ++ V + +R+IV DS N
Sbjct: 58 VGDRKNKTV-------KLFSPSGDHLSEFGSYGTRDKQLAMADFLTVDSNDRIIVCDSGN 110
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
H V++FD G+++ FG G +G+L++P+G+ VDD+ I V D+ NNR+ +F+P+G+++
Sbjct: 111 HCVKVFDREGKLLLMFGGRGRLKGELQWPKGICVDDKDNIIVADTKNNRVCMFSPEGEYI 170
Query: 280 R 280
+
Sbjct: 171 Q 171
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 17/176 (9%)
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV-FQSDGTFVGKFGSMGNKAGQLEHPHY 203
E P +AV N+ +V+V+D N++++ ++ G + FQ DG P+
Sbjct: 4 EQPTSLAVLNSGKVVVADYNHNQLLFYNKEGEIEFQLDGM----------------KPYS 47
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
IAV +T V+V D N V++F +G ++ FGS G+ + QL + VD I V D
Sbjct: 48 IAVDHTGNVLVGDRKNKTVKLFSPSGDHLSEFGSYGTRDKQLAMADFLTVDSNDRIIVCD 107
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
SGN+ +++F +G+ L FG G GE + +G+ V NI+V D +N+R+ +F
Sbjct: 108 SGNHCVKVFDREGKLLLMFGGRGRLKGELQWPKGICVDDKDNIIVADTKNNRVCMF 163
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 13/97 (13%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------- 95
+ GS G+ + V ++ I+V DS NH V+V FD + + +
Sbjct: 78 EFGSYGTRDKQLAMADFLTVDSNDRIIVCDSGNHCVKV----FDREGKLLLMFGGRGRLK 133
Query: 96 -AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV 131
WP+GI V ++I+VAD+ N+RV +F +G ++
Sbjct: 134 GELQWPKGICVDDKDNIIVADTKNNRVCMFSPEGEYI 170
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT-------NC 92
+L G RG G WP+GI V ++I+VAD+ N+RV + P + N
Sbjct: 121 KLLLMFGGRGRLKGELQWPKGICVDDKDNIIVADTKNNRVCMFSPEGEYIQRVVKNIPNA 180
Query: 93 VFLAFTWPRGIAV 105
++FT P + V
Sbjct: 181 YAVSFTKPNQLGV 193
>gi|290982376|ref|XP_002673906.1| predicted protein [Naegleria gruberi]
gi|284087493|gb|EFC41162.1| predicted protein [Naegleria gruberi]
Length = 333
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 139/280 (49%), Gaps = 14/280 (5%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIV-VADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGI 103
IGS GS+ G F P +A+ N ++ V D+ N R+QV F L +F P +
Sbjct: 60 IGSYGSQNGQFKNPSDVAIDFKNQLIFVVDTDNRRIQV-FDESTLTFKYMFTTPFKPNAV 118
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 163
V D++++++ + + + + +G + ++G + K ++ P + V + V D
Sbjct: 119 TVHWDHTLIISFTRDSLICKYDFNGNEIWRWGGVTTK-NVMDSPTGVVVDYEGNIYVCDW 177
Query: 164 NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
HR+ +F G + +S GSMG + GQ P I + + +I+SDS N+R+Q
Sbjct: 178 FKHRIVVFSPGGELLKS-------IGSMGKEYGQFSFPRDIDIDSAGNIIISDSGNNRIQ 230
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ-GYISVGDSGNNRIQIFTPDGQF--LR 280
I NG I+SFGS G+++G+ + P V VD G I + + ++RI F P F
Sbjct: 231 ILKSNGEFISSFGSIGNDKGEFQAPNSVFVDKSTGDIFLTEWDSHRISKFHPSNPFSGST 290
Query: 281 AFGCWGSGDGEFKGLEGVA-VMSNGNILVCDRENHRIQVF 319
G +G+ + K G+A + + + D N+RI+V+
Sbjct: 291 CIGSFGNHENSLKYPSGIAFCYGSSRLFIVDTGNNRIKVY 330
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 114/230 (49%), Gaps = 35/230 (15%)
Query: 125 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI-VSDSNNHRVQIFDVNGRVFQ---- 179
QS+ +G GS G++ GQ ++P +A+ N++I V D++N R+Q+FD + F+
Sbjct: 51 QSEFELIGCIGSYGSQNGQFKNPSDVAIDFKNQLIFVVDTDNRRIQVFDESTLTFKYMFT 110
Query: 180 --------------------SDGTFVGKFGSMGNKAGQ---------LEHPHYIAVSNTN 210
+ + + K+ GN+ + ++ P + V
Sbjct: 111 TPFKPNAVTVHWDHTLIISFTRDSLICKYDFNGNEIWRWGGVTTKNVMDSPTGVVVDYEG 170
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
+ V D HR+ +F G ++ S GS G E GQ FPR + +D G I + DSGNNRIQ
Sbjct: 171 NIYVCDWFKHRIVVFSPGGELLKSIGSMGKEYGQFSFPRDIDIDSAGNIIISDSGNNRIQ 230
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAV-MSNGNILVCDRENHRIQVF 319
I +G+F+ +FG G+ GEF+ V V S G+I + + ++HRI F
Sbjct: 231 ILKSNGEFISSFGSIGNDKGEFQAPNSVFVDKSTGDIFLTEWDSHRISKF 280
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 53/192 (27%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
L IGS G E G F++PR I + +I+++DS N+R+Q
Sbjct: 190 ELLKSIGSMGKEYGQFSFPRDIDIDSAGNIIISDSGNNRIQ------------------- 230
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRV 158
+ +S+G F+ FGS+GN G+ + P+ + V +T +
Sbjct: 231 -----------------------ILKSNGEFISSFGSIGNDKGEFQAPNSVFVDKSTGDI 267
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGK--FGSMGNKAGQLEHPHYIAVS-NTNRVIVS 215
+++ ++HR+ F F G GS GN L++P IA ++R+ +
Sbjct: 268 FLTEWDSHRIS-------KFHPSNPFSGSTCIGSFGNHENSLKYPSGIAFCYGSSRLFIV 320
Query: 216 DSNNHRVQIFDV 227
D+ N+R++++ V
Sbjct: 321 DTGNNRIKVYRV 332
>gi|260785714|ref|XP_002587905.1| hypothetical protein BRAFLDRAFT_87293 [Branchiostoma floridae]
gi|229273060|gb|EEN43916.1| hypothetical protein BRAFLDRAFT_87293 [Branchiostoma floridae]
Length = 1751
Score = 112 bits (279), Expect = 3e-22, Method: Composition-based stats.
Identities = 83/264 (31%), Positives = 120/264 (45%), Gaps = 59/264 (22%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ------------- 143
F +PRG+ V P N I VAD +N RVQV ++G ++ F + G Q
Sbjct: 1494 FQFPRGVVVSPSNEIFVADKNNGRVQVHSTEGVYLRHFPTRGTVITQHDVCMDGNGTLWV 1553
Query: 144 ------------------------LEHPHY---IAVS-NTNRVIVSDSNNHRVQIFDVNG 175
L Y IA+ TN ++V+D + V+
Sbjct: 1554 VGGGKTADRVVQYSTDGTAMAGFDLRSNRYLRGIALDMRTNHILVTDPDKGAVE------ 1607
Query: 176 RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSF 235
VF+ DG+ V + G++ PHY+ V +V+D NH V ++D +G+ + F
Sbjct: 1608 -VFRPDGSLVRTVRH--PRDGEMTLPHYVTVDGEGNFLVTDLINHCVYVYDESGKFLFQF 1664
Query: 236 GSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL 295
G +GS EGQL P G+ D G+I V D G RIQIFT G+F+R GS
Sbjct: 1665 GGKGSGEGQLWNPHGICTDSSGHILVADYG--RIQIFTRHGEFVRTIRT-GSEP------ 1715
Query: 296 EGVAVMSNGNILVCDRENHRIQVF 319
EG+AV G ++V D +NH + F
Sbjct: 1716 EGLAVGPEGQLVVTDWDNHTVTAF 1739
Score = 110 bits (274), Expect = 1e-21, Method: Composition-based stats.
Identities = 77/250 (30%), Positives = 114/250 (45%), Gaps = 56/250 (22%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG-------------- 142
F +PRG+ V P N I VAD N RVQV ++G ++ F ++ AG
Sbjct: 516 FDYPRGVVVSPGNEIFVADKDNRRVQVHSTEGVYLRHFPTVVPGAGGKDMEPDDVCMDGN 575
Query: 143 ----------------------------QLEHPHY---IAVS-NTNRVIVSDSNNHRVQI 170
LE Y IAV TN ++V+D+ V
Sbjct: 576 GTLWVVGRGWTADHVVQYSTDGTVMARFDLEKIDYFRGIAVDVRTNHILVTDAYQDAVH- 634
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VF+ DG+ V ++ + G++ H Y+ V ++VSD +++ V +FD +G+
Sbjct: 635 ------VFRPDGSLVR---TVRHPEGKMIHQRYVTVDGEGNILVSDRDSNFVYVFDESGK 685
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+ FG +GS EGQL+ P G+ D G+I V D GN R+QIFT G+F+R +G
Sbjct: 686 FLFQFGGKGSGEGQLRNPSGICTDSSGHIIVADRGNERVQIFTRHGEFVRTVRTGFKPEG 745
Query: 291 EFKGLEGVAV 300
G EG V
Sbjct: 746 LAVGPEGQLV 755
Score = 102 bits (255), Expect = 2e-19, Method: Composition-based stats.
Identities = 82/282 (29%), Positives = 123/282 (43%), Gaps = 62/282 (21%)
Query: 38 KRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ------VCFPHF----- 86
K++ G GSEPG F +PRG+ V P N I VAD N RVQ V HF
Sbjct: 499 KKQGVITFGGEGSEPGKFDYPRGVVVSPGNEIFVADKDNRRVQVHSTEGVYLRHFPTVVP 558
Query: 87 -----DLKTNCVFL----------------------------------AFTWPRGIAVG- 106
D++ + V + + RGIAV
Sbjct: 559 GAGGKDMEPDDVCMDGNGTLWVVGRGWTADHVVQYSTDGTVMARFDLEKIDYFRGIAVDV 618
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
N I+V D+ V VF+ DG+ V ++ + G++ H Y+ V ++VSD +++
Sbjct: 619 RTNHILVTDAYQDAVHVFRPDGSLVR---TVRHPEGKMIHQRYVTVDGEGNILVSDRDSN 675
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
V +FD +G+ F+ +FG G+ GQL +P I ++ +IV+D N RVQIF
Sbjct: 676 FVYVFDESGK-------FLFQFGGKGSGEGQLRNPSGICTDSSGHIIVADRGNERVQIFT 728
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQ-GYISVGDSGNN 267
+G + + + EG P G V Q G+ VG +N
Sbjct: 729 RHGEFVRTVRTGFKPEGLAVGPEGQLVHGQAGFTPVGLCASN 770
Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG---RVFQSDGTFVGKF-- 188
FG G + G+ + P + VS +N + V+D NN RVQ+ G R F + GT + +
Sbjct: 1484 FGGEGTEPGKFQFPRGVVVSPSNEIFVADKNNGRVQVHSTEGVYLRHFPTRGTVITQHDV 1543
Query: 189 -------------GSMGNKAGQ------------LEHPHY---IAVS-NTNRVIVSDSNN 219
G ++ Q L Y IA+ TN ++V+D +
Sbjct: 1544 CMDGNGTLWVVGGGKTADRVVQYSTDGTAMAGFDLRSNRYLRGIALDMRTNHILVTDPDK 1603
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
V++F +G ++ + +G++ P V VD +G V D N+ + ++ G+FL
Sbjct: 1604 GAVEVFRPDGSLVRTV--RHPRDGEMTLPHYVTVDGEGNFLVTDLINHCVYVYDESGKFL 1661
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GSG+G+ G+ S+G+ILV D RIQ+F
Sbjct: 1662 FQFGGKGSGEGQLWNPHGICTDSSGHILVADY--GRIQIF 1699
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 62/244 (25%), Positives = 98/244 (40%), Gaps = 59/244 (24%)
Query: 132 GKFGSMGNKAGQ----LEHPHYIAV--SNTNRVI------VSDSNNHRVQIFDVNGRVFQ 179
G+ G G+K G+ E +A+ S+++R + + H +I D+ G
Sbjct: 1414 GRPGDKGDKLGEDRTAKEEGKTVAMQDSDSDRRVEILGTEAPEQERHTAEI-DLEGVAHG 1472
Query: 180 SDGTF---VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI----------FD 226
S G V FG G + G+ + P + VS +N + V+D NN RVQ+ F
Sbjct: 1473 STGDLKQGVITFGGEGTEPGKFQFPRGVVVSPSNEIFVADKNNGRVQVHSTEGVYLRHFP 1532
Query: 227 VNGRVIT-------------------------SFGSEGSEEGQL-----KFPRGVAVDDQ 256
G VIT + ++G+ ++ RG+A+D +
Sbjct: 1533 TRGTVITQHDVCMDGNGTLWVVGGGKTADRVVQYSTDGTAMAGFDLRSNRYLRGIALDMR 1592
Query: 257 -GYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHR 315
+I V D +++F PDG +R DGE V V GN LV D NH
Sbjct: 1593 TNHILVTDPDKGAVEVFRPDGSLVRTVR--HPRDGEMTLPHYVTVDGEGNFLVTDLINHC 1650
Query: 316 IQVF 319
+ V+
Sbjct: 1651 VYVY 1654
Score = 45.1 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G +GS G P GI I+VAD R+Q+ H +
Sbjct: 1654 YDESGKFLFQFGGKGSGEGQLWNPHGICTDSSGHILVADYG--RIQIFTRHGEFVR--TI 1709
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
+ P G+AVGP+ +VV D NH V F
Sbjct: 1710 RTGSEPEGLAVGPEGQLVVTDWDNHTVTAF 1739
>gi|26335303|dbj|BAC31352.1| unnamed protein product [Mus musculus]
Length = 174
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 99/179 (55%), Gaps = 10/179 (5%)
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
+G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 2 SGKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQFAG 54
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
PH+ AV++ N +I++D +NH V++F+ G + FGS G GQ P GVAVD G I
Sbjct: 55 PHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNII 114
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V D GN+RIQ+F G FL S D G +G+A+ S+G+++V D NH +V+
Sbjct: 115 VADWGNSRIQVFDGSGSFLSYINT--SAD-PLYGPQGLALTSDGHVVVADSGNHCFKVY 170
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 15/178 (8%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWPRGIAVGP 107
G P+G++V + I+V D+ V + P+ + T F P AV
Sbjct: 3 GKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNS 62
Query: 108 DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 167
+N I++ D NH V+VF +G F+ KFGS G GQ P +AV + +IV+D N R
Sbjct: 63 NNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSR 122
Query: 168 VQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
+Q+FD +G T A L P +A+++ V+V+DS NH +++
Sbjct: 123 IQVFDGSGSFLSYINT----------SADPLYGPQGLALTSDGHVVVADSGNHCFKVY 170
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLKTNCVFLA- 96
++ + GSRG+ F P AV +N I++ D NH V+V F LK
Sbjct: 37 KIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGN 96
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F P G+AV + +I+VAD N R+QVF G+F+ + A L P +A+++
Sbjct: 97 GQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSY---INTSADPLYGPQGLALTS 153
Query: 155 TNRVIVSDSNNHRVQIF 171
V+V+DS NH +++
Sbjct: 154 DGHVVVADSGNHCFKVY 170
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q+ K GS G G F P G+AV + +I+VAD N R+QV FD + FL+
Sbjct: 81 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FDGSGS--FLS 134
Query: 97 FT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ P+G+A+ D +VVADS NH +V++
Sbjct: 135 YINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYR 171
>gi|291237190|ref|XP_002738518.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 739
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 137/286 (47%), Gaps = 22/286 (7%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW- 99
L K G +GS G F G+ V + V D N RVQ+ + + F FT
Sbjct: 467 LICKYGIKGSGMGQFRGIWGVCVDGNGVTAVCDQGNQRVQLFSLYGTHQRVLQFTNFTSR 526
Query: 100 --PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN- 156
PR +AV ++ + D+SN +V V + + FG+ +L P IA+S N
Sbjct: 527 FDPRHVAVSKESYYFITDNSNKQVVVCDENSKVIRCFGNQ-----ELTSPMGIAISPVND 581
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
RV V D + H + R++ DG +V FGS GN Q +P I + N VIV++
Sbjct: 582 RVYVCDFSAHCI-------RIYTQDGEYVKSFGSQGNGQCQFYYPWGITIDNKGNVIVAE 634
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
NNHR+Q+ + +G + SFGS+G+ + P VA D+ G + V D NNR+ + G
Sbjct: 635 HNNHRIQVCNSDGVFLFSFGSQGNGNNEFSCPLDVACDNDGNMYVCDYNNNRVLKYDSHG 694
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSN---GNILVCDRENHRIQVF 319
F+ S + G++V + G+++V D+ + I+VF
Sbjct: 695 VFVSRI---DSDQDALQCPAGISVTDDKPFGHVVVVDQRSQCIKVF 737
>gi|260813800|ref|XP_002601604.1| hypothetical protein BRAFLDRAFT_85827 [Branchiostoma floridae]
gi|229286903|gb|EEN57616.1| hypothetical protein BRAFLDRAFT_85827 [Branchiostoma floridae]
Length = 287
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 124/266 (46%), Gaps = 17/266 (6%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDN-SIVV 113
F P IAVG + ++ V D V + F + + W RG+AV P + +I++
Sbjct: 35 FKNPVAIAVGKEATLFVVDQGTKTVHM-FSAEGKAVSTFSIPTAWARGVAVSPTSGNILI 93
Query: 114 ADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 173
++ N V F G V F S + IA +N R++ D + H V +F
Sbjct: 94 VENENQSVMTFTPSGELVHSFHS-----DHFSSCYGIAEANDGRILAVDYSEHCVAMF-- 146
Query: 174 NGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT 233
+SDGTF+ G G+ G+ P +IA++ ++ +VSDS NHR+Q F+ +G
Sbjct: 147 -----ESDGTFIRSIGKRGDGEGEFYRPFFIAMTKSDGFVVSDSYNHRLQTFNKDGHFER 201
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+FG G + P GV V +G I V D N+R+Q+ +G + + DG
Sbjct: 202 AFGQRGETNADFELPLGVGVGGRGEIVVADRDNHRLQVVDTNGSHVTTI---ANDDGRLD 258
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
+AV +G++ V + ++ + F
Sbjct: 259 SPANIAVTYDGHVYVINGKDKSVDKF 284
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 113/244 (46%), Gaps = 25/244 (10%)
Query: 79 VQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
V V F + T + F P IAVG + ++ V D V +F ++G V F
Sbjct: 17 VHVGFQNVSGTTETGQVQFKNPVAIAVGKEATLFVVDQGTKTVHMFSAEGKAVSTFSIPT 76
Query: 139 NKAGQLEHPHYIAVSNTN-RVIVSDSNNHRVQIFDVNGRV---FQSDGTFVGKFGSMGNK 194
A +AVS T+ +++ ++ N V F +G + F SD F +G
Sbjct: 77 AWA------RGVAVSPTSGNILIVENENQSVMTFTPSGELVHSFHSD-HFSSCYG----- 124
Query: 195 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
IA +N R++ D + H V +F+ +G I S G G EG+ P +A+
Sbjct: 125 ---------IAEANDGRILAVDYSEHCVAMFESDGTFIRSIGKRGDGEGEFYRPFFIAMT 175
Query: 255 DQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
V DS N+R+Q F DG F RAFG G + +F+ GV V G I+V DR+NH
Sbjct: 176 KSDGFVVSDSYNHRLQTFNKDGHFERAFGQRGETNADFELPLGVGVGGRGEIVVADRDNH 235
Query: 315 RIQV 318
R+QV
Sbjct: 236 RLQV 239
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 38/210 (18%)
Query: 57 WPRGIAVGPDN-SIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVAD 115
W RG+AV P + +I++ ++ N V P +L + F+ GIA D I+ D
Sbjct: 78 WARGVAVSPTSGNILIVENENQSVMTFTPSGELVHSFHSDHFSSCYGIAEANDGRILAVD 137
Query: 116 SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 175
S H V +F+SDGTF+ G G+ G+ P +IA++ ++ +VSDS NHR+Q F+ +G
Sbjct: 138 YSEHCVAMFESDGTFIRSIGKRGDGEGEFYRPFFIAMTKSDGFVVSDSYNHRLQTFNKDG 197
Query: 176 ---RVFQSDGTFVGKF----------------------------------GSMGNKAGQL 198
R F G F ++ N G+L
Sbjct: 198 HFERAFGQRGETNADFELPLGVGVGGRGEIVVADRDNHRLQVVDTNGSHVTTIANDDGRL 257
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
+ P IAV+ V V + + V F N
Sbjct: 258 DSPANIAVTYDGHVYVINGKDKSVDKFKYN 287
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDL------KTNCVFLA 96
IG RG G F P IA+ + VV+DS NHR+Q HF+ +TN
Sbjct: 156 IGKRGDGEGEFYRPFFIAMTKSDGFVVSDSYNHRLQTFNKDGHFERAFGQRGETNA---D 212
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G+ VG IVVAD NHR+QV ++G+ V ++ N G+L+ P IAV+
Sbjct: 213 FELPLGVGVGGRGEIVVADRDNHRLQVVDTNGSHV---TTIANDDGRLDSPANIAVTYDG 269
Query: 157 RVIVSDSNNHRVQIFDVN 174
V V + + V F N
Sbjct: 270 HVYVINGKDKSVDKFKYN 287
>gi|260811644|ref|XP_002600532.1| hypothetical protein BRAFLDRAFT_145043 [Branchiostoma floridae]
gi|229285819|gb|EEN56544.1| hypothetical protein BRAFLDRAFT_145043 [Branchiostoma floridae]
Length = 760
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 126/261 (48%), Gaps = 35/261 (13%)
Query: 69 IVVADSSNHRVQVCFPHFDLKTNCVFL---------AFTWPRGIAVGPDNSIVVADSSNH 119
I V D+ H+V V FDL N F P G+ + +++VA+ ++
Sbjct: 523 IFVTDNRAHKVVV----FDLDGNLKFSFGKRGTNQGELNGPTGVTLDRAGNVIVANKADG 578
Query: 120 RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ 179
RVQVF DGT++ K+ L HP +AV R++V+DS + Q
Sbjct: 579 RVQVFGPDGTYL----RTTLKSDCLRHPRGVAVLQNGRMVVADSKQKSCLLL-------Q 627
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI-VSDSNNHRVQIFDVNGRVITSFGSE 238
DG+ + G G+L++P ++A + + V+DS HRV +FD+ G++ SFG +
Sbjct: 628 PDGSLIRDIGK-----GKLQYPRFLAADESRDLFFVTDSPAHRVLVFDLEGKLKFSFGEQ 682
Query: 239 GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGV 298
G EG+L +P G+ VD G I V + R+Q+F DG +LR G F +G+
Sbjct: 683 GRNEGELSWPTGITVDPAGNIVVVNRDGGRLQVFGSDGTYLRTVATVKGG---FP--QGI 737
Query: 299 AVMSNGNILVCDRENHRIQVF 319
+ +G+I V H I+ +
Sbjct: 738 ELTPDGHIAVACSYGHCIKFY 758
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 136/301 (45%), Gaps = 42/301 (13%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-------CFPHFDLKTNCVFLAF 97
IGS G+E G P +A+ D ++VV + N RVQV F + + +F
Sbjct: 432 IGSEGNEEGQLKKPIDVAIDGDGNVVVLEQVNRRVQVFHAGQGHMLKRFPIDSEGLFGTD 491
Query: 98 TWPRGIA---------------VGPDNS---IVVADSSNHRVQVFQSDGTFVGKFGSMGN 139
T G + D S I V D+ H+V VF DG FG G
Sbjct: 492 TDSSGNLLIRDIGKGQLQDPWFIAADQSRGLIFVTDNRAHKVVVFDLDGNLKFSFGKRGT 551
Query: 140 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE 199
G+L P + + VIV++ + RVQ VF DGT++ K+ L
Sbjct: 552 NQGELNGPTGVTLDRAGNVIVANKADGRVQ-------VFGPDGTYL----RTTLKSDCLR 600
Query: 200 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGY 258
HP +AV R++V+DS + +G +I G +G+L++PR +A D+ +
Sbjct: 601 HPRGVAVLQNGRMVVADSKQKSCLLLQPDGSLIRDIG-----KGKLQYPRFLAADESRDL 655
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
V DS +R+ +F +G+ +FG G +GE G+ V GNI+V +R+ R+QV
Sbjct: 656 FFVTDSPAHRVLVFDLEGKLKFSFGEQGRNEGELSWPTGITVDPAGNIVVVNRDGGRLQV 715
Query: 319 F 319
F
Sbjct: 716 F 716
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 116/238 (48%), Gaps = 27/238 (11%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP-----HFDLKTNCVFL 95
L+F G RG+ G P G+ + +++VA+ ++ RVQV P LK++C
Sbjct: 542 LKFSFGKRGTNQGELNGPTGVTLDRAGNVIVANKADGRVQVFGPDGTYLRTTLKSDC--- 598
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
PRG+AV + +VVADS + Q DG+ + G G+L++P ++A +
Sbjct: 599 -LRHPRGVAVLQNGRMVVADSKQKSCLLLQPDGSLIRDIGK-----GKLQYPRFLAADES 652
Query: 156 NRV-IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ V+DS HRV +FD+ G++ S FG G G+L P I V ++V
Sbjct: 653 RDLFFVTDSPAHRVLVFDLEGKLKFS-------FGEQGRNEGELSWPTGITVDPAGNIVV 705
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+ + R+Q+F +G + + + FP+G+ + G+I+V S + I+ +
Sbjct: 706 VNRDGGRLQVFGSDGTYLRTVATVKG-----GFPQGIELTPDGHIAVACSYGHCIKFY 758
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 86/177 (48%), Gaps = 24/177 (13%)
Query: 167 RVQIFDVNGRVF----QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
+V+ DV G F +S + V GS GN+ GQL+ P +A+ V+V + N RV
Sbjct: 407 KVKDRDVAGSPFDVFVRSRESAVITIGSEGNEEGQLKKPIDVAIDGDGNVVVLEQVNRRV 466
Query: 223 QIF-------------DVNGRVITSFGSEGSE------EGQLKFPRGVAVDD-QGYISVG 262
Q+F D G T S G+ +GQL+ P +A D +G I V
Sbjct: 467 QVFHAGQGHMLKRFPIDSEGLFGTDTDSSGNLLIRDIGKGQLQDPWFIAADQSRGLIFVT 526
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D+ +++ +F DG +FG G+ GE G GV + GN++V ++ + R+QVF
Sbjct: 527 DNRAHKVVVFDLDGNLKFSFGKRGTNQGELNGPTGVTLDRAGNVIVANKADGRVQVF 583
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+L+F G +G G +WP GI V P +IVV + R+QV + +
Sbjct: 674 KLKFSFGEQGRNEGELSWPTGITVDPAGNIVVVNRDGGRLQVFGSDGTYLRTVATVKGGF 733
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+GI + PD I VA S H ++ ++
Sbjct: 734 PQGIELTPDGHIAVACSYGHCIKFYR 759
>gi|260823248|ref|XP_002604095.1| hypothetical protein BRAFLDRAFT_71616 [Branchiostoma floridae]
gi|260823282|ref|XP_002604112.1| hypothetical protein BRAFLDRAFT_71600 [Branchiostoma floridae]
gi|229289420|gb|EEN60106.1| hypothetical protein BRAFLDRAFT_71616 [Branchiostoma floridae]
gi|229289437|gb|EEN60123.1| hypothetical protein BRAFLDRAFT_71600 [Branchiostoma floridae]
Length = 618
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 56/269 (20%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKF---------------------- 134
F +P G+ V + I VAD N R+QVF GTFV +F
Sbjct: 357 FMYPVGVTVSDEGEIFVADWQNQRIQVFTLQGTFVRQFPTVMSGEEKMYPYDVAMDGEGN 416
Query: 135 ----GSMG----------NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR---- 176
G G NK G++ + + R + D++ + + I G
Sbjct: 417 LWVVGETGPDSADFAVQYNKQGRMLRKFDLQKTGCVRGVAVDTSRNHILITQTTGDDEGN 476
Query: 177 ------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VF+ DGT V ++G + G + P YI V ++VSD +NH V +++ +G
Sbjct: 477 LHGEVLVFRPDGTLVR---TVGQQQGMV-FPQYITVDGEGNILVSDWSNHCVYVYNKDGE 532
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+ FG EGS EGQL +PRG+ D G I V D+GN R+++F G+FL+
Sbjct: 533 FLFQFGGEGSGEGQLNWPRGICTDRAGNIIVADAGNRRVEMFDKTGKFLKHIAT------ 586
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ KG VA+ + G ++V D + ++ +F
Sbjct: 587 DMKGALAVAIATQGQLVVNDWKESKVTIF 615
>gi|260785724|ref|XP_002587910.1| hypothetical protein BRAFLDRAFT_87298 [Branchiostoma floridae]
gi|229273065|gb|EEN43921.1| hypothetical protein BRAFLDRAFT_87298 [Branchiostoma floridae]
Length = 792
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 133/286 (46%), Gaps = 39/286 (13%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTW 99
G +GSEPG +PRG+ V N I V D+ N RVQV HF
Sbjct: 531 GGKGSEPGKVDYPRGVVVSSSNEIFVTDTHNKRVQVHSTEGVYLRHFPTVVPGTGDKVMM 590
Query: 100 PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMG--NKAGQLEHPHYIAVS- 153
P + + + ++ V +++ H VQ +DGT + +F N G IA+
Sbjct: 591 PHDVCMDGNGTLWVVGRGETAEHVVQC-STDGTAMKRFDLKKSYNFRG-------IAMDM 642
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
TN ++V+D+ V VF+ DG+ V G + +P Y+ V ++
Sbjct: 643 RTNHILVTDAGQDAVH-------VFRPDGSLVRTVRHPG-----MMYPRYVTVDGEGNIL 690
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
VSD N+ V ++D +G+ + EGS EGQL P G+ D G+I V D GN R+QIFT
Sbjct: 691 VSDYNSDSVYVYDESGKSLFQLRGEGSGEGQLNGPAGICTDCSGHILVADYGNGRVQIFT 750
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F+R FK +G+AV G ++V NH + VF
Sbjct: 751 RHGEFVRTVRTG------FKP-QGLAVGPEGQLVVTSLLNHTVTVF 789
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 44/225 (19%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM-- 191
FG G++ G++++P + VS++N + V+D++N RVQ+ G + T V G
Sbjct: 530 FGGKGSEPGKVDYPRGVVVSSSNEIFVTDTHNKRVQVHSTEGVYLRHFPTVVPGTGDKVM 589
Query: 192 --------GN-------KAGQLEH-----------------PHY----IAVS-NTNRVIV 214
GN + EH Y IA+ TN ++V
Sbjct: 590 MPHDVCMDGNGTLWVVGRGETAEHVVQCSTDGTAMKRFDLKKSYNFRGIAMDMRTNHILV 649
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+D+ V +F +G ++ + G + +PR V VD +G I V D ++ + ++
Sbjct: 650 TDAGQDAVHVFRPDGSLVRTVRHPG-----MMYPRYVTVDGEGNILVSDYNSDSVYVYDE 704
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ L GSG+G+ G G+ +G+ILV D N R+Q+F
Sbjct: 705 SGKSLFQLRGEGSGEGQLNGPAGICTDCSGHILVADYGNGRVQIF 749
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ +FG +GSE G++ +PRGV V I V D+ N R+Q+ + +G +LR F G G+
Sbjct: 527 VVTFGGKGSEPGKVDYPRGVVVSSSNEIFVTDTHNKRVQVHSTEGVYLRHFPTVVPGTGD 586
Query: 292 FKGL-EGVAVMSNGNILVCDR 311
+ V + NG + V R
Sbjct: 587 KVMMPHDVCMDGNGTLWVVGR 607
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRG 102
F++ GS G P GI I+VAD N RVQ+ H + V F P+G
Sbjct: 710 FQLRGEGSGEGQLNGPAGICTDCSGHILVADYGNGRVQIFTRHGEF-VRTVRTGFK-PQG 767
Query: 103 IAVGPDNSIVVADSSNHRVQVF 124
+AVGP+ +VV NH V VF
Sbjct: 768 LAVGPEGQLVVTSLLNHTVTVF 789
>gi|291244525|ref|XP_002742146.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 690
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 141/284 (49%), Gaps = 24/284 (8%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIA 104
IG GSE GC++ PR IA+ + IV AD + R+ V + K N + + PR +
Sbjct: 420 IGKEGSEVGCYSLPRNIAIHKNGDIVTADKGHARLVVTDRYGGYK-NTINIEQYNPRSVC 478
Query: 105 VGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI-VSDS 163
+ D + V D +V + +G + F +++P YIAV + + +I VSD
Sbjct: 479 IFNDKYL-VTDFIKKQVVISDMNGKVIKVFSE------NMKNPAYIAVRSIDDMIFVSDW 531
Query: 164 NNHRVQIFDVNG---RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+ Q D +G R + SDG V FG G GQ + + +A N + VSD N+
Sbjct: 532 DLKPHQNTDKDGHWIRTYTSDGYHVKSFGGYGTNPGQFKGIYSMAFDNQGMLFVSDYGNN 591
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+Q+F+ + + + SF +G +GQ+ PRG+A D GY+ V ++ NN++Q F G F+
Sbjct: 592 RIQVFNTDNKYMYSFNCQGQGDGQIYKPRGIATDKNGYVYVCNN-NNKVQKFDRSGHFIC 650
Query: 281 AFGCWGSGDGEFKGL---EGVAVMSNG--NILVCDRENHRIQVF 319
D + GL +AV + ++V D+ N +++F
Sbjct: 651 RI------DKDTDGLNVPHDIAVTDDMPYRVVVVDKNNKCLRIF 688
>gi|405951304|gb|EKC19228.1| Tripartite motif-containing protein 2 [Crassostrea gigas]
Length = 391
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 128/283 (45%), Gaps = 33/283 (11%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL------KT 90
+ +L F IG RGS G F +PR + D +VVAD+ NHRVQ+ F F + K
Sbjct: 95 KPEKLLFNIGMRGSGNGDFNFPRSVITTRDGDVVVADTMNHRVQI-FNSFGVFLTKFGKK 153
Query: 91 NCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
L F P +A P+ + VAD N RVQ+ G F F + ++ P+ I
Sbjct: 154 GTGKLQFNEPSDVAEIPNGDLAVADKRNKRVQIITQGGQFRSVFET-------VDEPYSI 206
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRV---FQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
A + VIVS + ++++ G++ F G FG I V+
Sbjct: 207 ASDLSGNVIVS-TTRRTIEVYKKGGKLIHRFVIPGVSCDTFGCK------------ICVN 253
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
N +IV D+ N ++ F NGR ++ F S EG P G+ ++ G I V DS N+
Sbjct: 254 NRQEIIVCDAVNSTIKFFTYNGRYVSKFSPRSSGEGLTMIPSGITINRMGEILVADSLNH 313
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
I ++ +G FLR C G ++ AV G+++ +
Sbjct: 314 TINVYNDNGDFLRQAICPTDQAG---CIQACAVGPEGHLITTE 353
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+++ + G GS G FPR V G + V D+ N+R+QIF G FL FG G+G
Sbjct: 98 KLLFNIGMRGSGNGDFNFPRSVITTRDGDVVVADTMNHRVQIFNSFGVFLTKFGKKGTGK 157
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQV 318
+F VA + NG++ V D+ N R+Q+
Sbjct: 158 LQFNEPSDVAEIPNGDLAVADKRNKRVQI 186
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 180 SDGT-----FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
SDGT + G G+ G P + + V+V+D+ NHRVQIF+ G +T
Sbjct: 90 SDGTKKPEKLLFNIGMRGSGNGDFNFPRSVITTRDGDVVVADTMNHRVQIFNSFGVFLTK 149
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
FG +G+ + Q P VA G ++V D N R+QI T GQF F
Sbjct: 150 FGKKGTGKLQFNEPSDVAEIPNGDLAVADKRNKRVQIITQGGQFRSVF 197
>gi|260800764|ref|XP_002595267.1| hypothetical protein BRAFLDRAFT_232970 [Branchiostoma floridae]
gi|229280511|gb|EEN51279.1| hypothetical protein BRAFLDRAFT_232970 [Branchiostoma floridae]
Length = 195
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 103/182 (56%), Gaps = 16/182 (8%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RV 158
P GIA ++ + V +SS V V+ + G+ + + G P IA N N RV
Sbjct: 27 PNGIAADSESQLWVTNSSGD-VTVYDTRGSHIKTVKTNG-------EPWGIAYDNRNDRV 78
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
I++D H V I ++DG+ + G+MG Q + P Y+AV+ +IVSD
Sbjct: 79 IITDVRQHCVIIL-------RTDGSPLATLGTMGRDDYQFDTPSYVAVNLLGDIIVSDCR 131
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
NH V++FD +GR + FG +GSE+G+L +PRGV D+ G I V D GN+R+++F +G+F
Sbjct: 132 NHCVKVFDESGRFMFRFGGKGSEDGRLSYPRGVCADEFGNIIVADYGNDRVELFDSNGKF 191
Query: 279 LR 280
L+
Sbjct: 192 LK 193
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 121 VQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQS 180
+QVF +G FV +F + + P+ IA + +++ V++S+ DV V+ +
Sbjct: 1 IQVFNMEGDFVSEFSTRTAGDRRSSIPNGIAADSESQLWVTNSSG------DVT--VYDT 52
Query: 181 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
G+ + + G P IA N N RVI++D H V I +G + + G+ G
Sbjct: 53 RGSHIKTVKTNG-------EPWGIAYDNRNDRVIITDVRQHCVIILRTDGSPLATLGTMG 105
Query: 240 SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVA 299
++ Q P VAV+ G I V D N+ +++F G+F+ FG GS DG GV
Sbjct: 106 RDDYQFDTPSYVAVNLLGDIIVSDCRNHCVKVFDESGRFMFRFGGKGSEDGRLSYPRGVC 165
Query: 300 VMSNGNILVCDRENHRIQVF 319
GNI+V D N R+++F
Sbjct: 166 ADEFGNIIVADYGNDRVELF 185
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 18/134 (13%)
Query: 58 PRGIAVGPDNS-IVVADSSNHRVQVCFPHFDLKTNCVFLA-----------FTWPRGIAV 105
P GIA N +++ D H V + L+T+ LA F P +AV
Sbjct: 66 PWGIAYDNRNDRVIITDVRQHCVII------LRTDGSPLATLGTMGRDDYQFDTPSYVAV 119
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
I+V+D NH V+VF G F+ +FG G++ G+L +P + +IV+D N
Sbjct: 120 NLLGDIIVSDCRNHCVKVFDESGRFMFRFGGKGSEDGRLSYPRGVCADEFGNIIVADYGN 179
Query: 166 HRVQIFDVNGRVFQ 179
RV++FD NG+ +
Sbjct: 180 DRVELFDSNGKFLK 193
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--------- 95
+G+ G + F P +AV I+V+D NH V+V FD +F
Sbjct: 101 LGTMGRDDYQFDTPSYVAVNLLGDIIVSDCRNHCVKV----FDESGRFMFRFGGKGSEDG 156
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV 131
++PRG+ +I+VAD N RV++F S+G F+
Sbjct: 157 RLSYPRGVCADEFGNIIVADYGNDRVELFDSNGKFL 192
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV 81
R F+ G +GSE G ++PRG+ +I+VAD N RV++
Sbjct: 143 RFMFRFGGKGSEDGRLSYPRGVCADEFGNIIVADYGNDRVEL 184
>gi|291233019|ref|XP_002736452.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 764
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 156/326 (47%), Gaps = 39/326 (11%)
Query: 15 LLQTLLVSGIGQVGTT------PRS--QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPD 66
L+ T GI QV T PR+ Q K+ L IG G+ G F P GIA+
Sbjct: 446 LMLTGQSDGIYQVKMTIGQQPIPRTPVQIPVKKGLVKIIGKEGTLDGQFQHPCGIAINKH 505
Query: 67 NSIVVADSSNHRVQVCFPHFDLKTNC-VFLAFT------WPRGIAVGPDNSIVVADSSNH 119
+ V AD +N RVQ+ D NC L FT P IA+ D+ + D+ N+
Sbjct: 506 GNYVAADGNNCRVQI----IDGNGNCKKVLKFTKFERSFIPFDIAISNDDKYFMTDAGNN 561
Query: 120 RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG---R 176
++ V +G FG +L P IA+S + + + ++ D G +
Sbjct: 562 QIVVSDENGKVFRCFGQ-----KELRDPCGIAISPLDGAVYVTEWDRNIEKSDKEGHCIK 616
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
F+ +G F+ G+ GN GQ + P++I++ + V++ N R+Q+F + R + FG
Sbjct: 617 KFKQNGEFIKVMGNYGNGRGQFKGPYFISIDCQGMMFVTEYINDRIQVFSSDNRPLYFFG 676
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
G + G + PRG+A+D YI V D NRI F G+F+ AF DG+ GL+
Sbjct: 677 RPGKDGGAVHGPRGIAIDRNRYIYVCDC-TNRIHKFDSGGRFI-AF-----ADGDLSGLD 729
Query: 297 ---GVAVMSN--GNILVCDRENHRIQ 317
G+A+ ++ ++V D++N+ IQ
Sbjct: 730 HPVGLALTNDTPSKVVVADKKNNCIQ 755
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 113/235 (48%), Gaps = 29/235 (12%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTF--VGKFGSMGNKAGQLEHPHYIAVSN 154
F P GIA+ + V AD +N RVQ+ +G V KF K + P IA+SN
Sbjct: 494 FQHPCGIAINKHGNYVAADGNNCRVQIIDGNGNCKKVLKF----TKFERSFIPFDIAISN 549
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
++ ++D+ N+++ + D NG+VF+ FG +L P IA+S + +
Sbjct: 550 DDKYFMTDAGNNQIVVSDENGKVFRC-------FGQ-----KELRDPCGIAISPLDGAVY 597
Query: 215 ----------SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDS 264
SD H ++ F NG I G+ G+ GQ K P +++D QG + V +
Sbjct: 598 VTEWDRNIEKSDKEGHCIKKFKQNGEFIKVMGNYGNGRGQFKGPYFISIDCQGMMFVTEY 657
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
N+RIQ+F+ D + L FG G G G G+A+ N I VCD N RI F
Sbjct: 658 INDRIQVFSSDNRPLYFFGRPGKDGGAVHGPRGIAIDRNRYIYVCDCTN-RIHKF 711
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 24/200 (12%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
V G G GQ +HP IA++ + +D NN RVQI D NG + V KF
Sbjct: 480 LVKIIGKEGTLDGQFQHPCGIAINKHGNYVAADGNNCRVQIIDGNGNCKK-----VLKF- 533
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
K + P IA+SN ++ ++D+ N+++ + D NG+V FG + +L+ P
Sbjct: 534 ---TKFERSFIPFDIAISNDDKYFMTDAGNNQIVVSDENGKVFRCFG-----QKELRDPC 585
Query: 250 GVAV---DDQGYISVGDSGNNR-------IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVA 299
G+A+ D Y++ D + I+ F +G+F++ G +G+G G+FKG ++
Sbjct: 586 GIAISPLDGAVYVTEWDRNIEKSDKEGHCIKKFKQNGEFIKVMGNYGNGRGQFKGPYFIS 645
Query: 300 VMSNGNILVCDRENHRIQVF 319
+ G + V + N RIQVF
Sbjct: 646 IDCQGMMFVTEYINDRIQVF 665
>gi|260785732|ref|XP_002587914.1| hypothetical protein BRAFLDRAFT_87302 [Branchiostoma floridae]
gi|229273069|gb|EEN43925.1| hypothetical protein BRAFLDRAFT_87302 [Branchiostoma floridae]
Length = 785
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 143/292 (48%), Gaps = 30/292 (10%)
Query: 38 KRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTN 91
K++ G +GSEPG F +PRG+ V P N I V D N RVQV HF
Sbjct: 511 KKQDVITFGGKGSEPGKFRFPRGVVVSPSNEIFVTDELNRRVQVHSTEGVYLRHFPAVVP 570
Query: 92 CVFLAFTWPRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
P + + + ++ V +++ H VQ + +DGT + F ++ H
Sbjct: 571 GTGDKDMEPFDVCMDGNGTLWVVGRGETAAHVVQ-YSTDGTAMAGF-----DLEKIRHSG 624
Query: 149 YIAVS-NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
IAV+ TN ++V+D++ V VF+ DG+ V ++ + G++ P + V
Sbjct: 625 GIAVNMRTNHILVTDADQGEVH-------VFRPDGSLVR---TVRHPEGEMRRPGDVTVD 674
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
++VSD + H V ++D +G+ + FG G EGQL P G+ D G+I V D N
Sbjct: 675 GEGNILVSDWDTHCVYVYDESGKFLFKFGGWGRGEGQLMGPAGICTDSSGHILVLDPMNK 734
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
R+QIFT G+++R SG F+ + +AV G ++V + ++ + V+
Sbjct: 735 RVQIFTRHGEYVRTVSTGHSG---FQPHD-LAVGPEGQLVVTNHWDNIVTVY 782
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD-LKTNCV 93
Y + + FK G G G P GI I+V D N RVQ+ H + ++T
Sbjct: 692 YDESGKFLFKFGGWGRGEGQLMGPAGICTDSSGHILVLDPMNKRVQIFTRHGEYVRTVST 751
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
+ P +AVGP+ +VV + ++ V V+
Sbjct: 752 GHSGFQPHDLAVGPEGQLVVTNHWDNIVTVY 782
>gi|87306382|ref|ZP_01088529.1| ring finger protein [Blastopirellula marina DSM 3645]
gi|87290561|gb|EAQ82448.1| ring finger protein [Blastopirellula marina DSM 3645]
Length = 312
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 142/293 (48%), Gaps = 31/293 (10%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW- 99
L+ G RG G F PR +A+ D+ + + D + R+QV FD N FL W
Sbjct: 31 LEAVWGERGISDGKFEKPRAVAIDADDQLYIVDMTA-RIQV----FD--RNGSFLR-AWQ 82
Query: 100 --------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKF---GSMGNKAGQLEH-P 147
P G++ +++AD+ +R+ V+ +DG + G G+ G+
Sbjct: 83 IPEYYRGRPSGLSFNNAGDLLIADTHYNRMLVYSADGRKLDDQTIGGVEGHGPGEFGFVT 142
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
+ S+ N I R+Q F + G ++ ++G G++ GQ P +A+
Sbjct: 143 DAVQDSHGNYYIAEYGQFDRIQ-------KFTASGEYLFEWGGHGDQPGQFVRPQNLAID 195
Query: 208 NTNRVIVSDSNNHRVQIFDVNGR---VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDS 264
+ + V+D+ NHR+Q+FD G ++ +G G + G+L +P + +D QG++ V +
Sbjct: 196 AEDHIWVADACNHRIQVFDATGDHAVLVKMWGVHGEQPGELSYPYDLVLDGQGHVYVIEF 255
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
GN+R+Q FT DGQ + +G G G+ +A+ S G + V D NHR+Q
Sbjct: 256 GNHRLQKFTLDGQSVGIWGGNGREPGQLFCPWALALDSRGRVHVIDSNNHRVQ 308
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 111/232 (47%), Gaps = 22/232 (9%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F PR +A+ D+ + + D + R+QVF +G+F+ + G+ P ++ +N
Sbjct: 45 FEKPRAVAIDADDQLYIVDMTA-RIQVFDRNGSFLRAWQIPEYYRGR---PSGLSFNNAG 100
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQS------DGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
++++D++ +R+ ++ +GR +G G+FG + + + S+ N
Sbjct: 101 DLLIADTHYNRMLVYSADGRKLDDQTIGGVEGHGPGEFGFVTDA---------VQDSHGN 151
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
I R+Q F +G + +G G + GQ P+ +A+D + +I V D+ N+RIQ
Sbjct: 152 YYIAEYGQFDRIQKFTASGEYLFEWGGHGDQPGQFVRPQNLAIDAEDHIWVADACNHRIQ 211
Query: 271 IFTPDGQ---FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+F G ++ +G G GE + + G++ V + NHR+Q F
Sbjct: 212 VFDATGDHAVLVKMWGVHGEQPGELSYPYDLVLDGQGHVYVIEFGNHRLQKF 263
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG---RVFQS 180
+S G +G G G+ E P +A+ +++ + D R+Q+FD NG R +Q
Sbjct: 25 LESPGGLEAVWGERGISDGKFEKPRAVAIDADDQLYIVDMTA-RIQVFDRNGSFLRAWQI 83
Query: 181 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI---TSFGS 237
+ G+ P ++ +N ++++D++ +R+ ++ +GR + T G
Sbjct: 84 PEYYRGR-------------PSGLSFNNAGDLLIADTHYNRMLVYSADGRKLDDQTIGGV 130
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGN-NRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
EG G+ F D G + + G +RIQ FT G++L +G G G+F +
Sbjct: 131 EGHGPGEFGFVTDAVQDSHGNYYIAEYGQFDRIQKFTASGEYLFEWGGHGDQPGQFVRPQ 190
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
+A+ + +I V D NHRIQVF
Sbjct: 191 NLAIDAEDHIWVADACNHRIQVF 213
>gi|291237713|ref|XP_002738777.1| PREDICTED: tripartite motif-containing 3-like [Saccoglossus
kowalevskii]
Length = 676
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 145/289 (50%), Gaps = 27/289 (9%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWP 100
++ + G+EPG F +P G+ + IVVAD N RVQ+ + K+ F ++ P
Sbjct: 404 MKLEKTIEGTEPGMFDYPLGVRINTCGDIVVADHENKRVQIIDIYGTPKSQLQFTGYSKP 463
Query: 101 R---GIAVGPDNSIVVAD------SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
+AV DN+ + D N++V V G + FG +L+ P IA
Sbjct: 464 VRPIDVAVSVDNTYFITDGIWEGNEGNNQVIVCNQYGKVIKCFG-----GKELQDPCGIA 518
Query: 152 VSNTNRVI-VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
+++ N ++ V D++ H +++++ G F+ ++ GS G + Q ++P++IA+++
Sbjct: 519 INHNNGIVYVVDNDAHCIRLYENTG--FK----YIKSVGSEGQGSCQFDYPYFIAINSKG 572
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
+IVSD+ N+R+Q+ +G + +F G + +P GV D I V D N+R+Q
Sbjct: 573 CLIVSDAGNNRIQVLTSDGVFMFAFS--GRPNDKFDWPNGVTTDKNDNIYVCDYSNHRVQ 630
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+F G+F+ SG G+A+ +G ++V D H +++F
Sbjct: 631 MFNSKGEFITNI---ASGSDVLCYPTGIAITDDGKVVVTDCR-HCVKIF 675
>gi|326321768|gb|ADZ53884.1| tripartite motif-containing protein 71 [Moschus moschiferus]
Length = 250
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 112/215 (52%), Gaps = 16/215 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 52 VVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI--- 96
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R+
Sbjct: 97 -ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRI 155
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL F
Sbjct: 156 QVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKF 215
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
G G+ +G+F VAV S ILV D NHRIQ
Sbjct: 216 GEKGTKNGQFNYPWDVAVNSVVKILVSDTRNHRIQ 250
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 81/124 (65%), Gaps = 7/124 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G++V + IVVAD SN+R+QVF+ G F KFG++G++ GQ + P +A + R++
Sbjct: 134 PWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIV 193
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+QIF +G F+ KFG G K GQ +P +AV++ +++VSD+ N
Sbjct: 194 VADKDNHRIQIFTF-------EGQFLLKFGEKGTKNGQFNYPWDVAVNSVVKILVSDTRN 246
Query: 220 HRVQ 223
HR+Q
Sbjct: 247 HRIQ 250
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 119 LSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 178
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +
Sbjct: 179 DRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSVVK 238
Query: 158 VIVSDSNNHRVQ 169
++VSD+ NHR+Q
Sbjct: 239 ILVSDTRNHRIQ 250
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 81/148 (54%), Gaps = 17/148 (11%)
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT----- 233
Q +GT+V + QLE H ++V+ N+ I N ++ +GR
Sbjct: 68 QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI----ENSPFKVVVKSGRSYVGIGLP 117
Query: 234 --SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
SFGSEG +G+L P GV+VD +GYI V D NNRIQ+F P G F FG GS G+
Sbjct: 118 GLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQ 177
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F GVA ++ I+V D++NHRIQ+F
Sbjct: 178 FDRPAGVACDASRRIVVADKDNHRIQIF 205
>gi|375107443|ref|ZP_09753704.1| NHL repeat protein [Burkholderiales bacterium JOSHI_001]
gi|374668174|gb|EHR72959.1| NHL repeat protein [Burkholderiales bacterium JOSHI_001]
Length = 369
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 138/298 (46%), Gaps = 31/298 (10%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL- 95
+ R+ + G R F P +A I VADS V V FD+ VFL
Sbjct: 67 EGRQRRLLTGERLPTERAFEKPVAVAARA-GRIYVADSVRRHVVV----FDVPRRKVFLM 121
Query: 96 ------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
P +A+ ++ VAD++ +V V+ + G F+ G + +L+ P
Sbjct: 122 GLRAPGTLVKPSAMALDAQGNLYVADATLRKVLVYDALGLFLRNVG----QPEELKRPTG 177
Query: 150 IAVS-NTNRVIV-----SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
+AVS + RV + +DS++HRV +D G + + G G++ GQ P
Sbjct: 178 VAVSPDGKRVYLVDRSDNDSDDHRVLAYD-------GQGAMLRQIGKRGSEPGQFNIPVQ 230
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
AV+ + V D+ N RVQ FD +G+ + +FG+ G+ GQ PRG+A D G + V D
Sbjct: 231 AAVAPDGTLWVLDAGNFRVQAFDPDGKYLRAFGNAGTGIGQFARPRGLACDGDGRLYVSD 290
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGD--GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+Q+F P G+ L A G D G + GVAV G + V D+ ++++V
Sbjct: 291 GSFGNVQVFNPQGELLIALGSGSRRDAPGRYGLPHGVAVDETGRVYVVDQLFNKVEVL 348
>gi|39998315|ref|NP_954266.1| NHL repeat domain-containing protein [Geobacter sulfurreducens PCA]
gi|409913665|ref|YP_006892130.1| NHL repeat domain-containing protein [Geobacter sulfurreducens
KN400]
gi|39985261|gb|AAR36616.1| NHL repeat domain lipoprotein [Geobacter sulfurreducens PCA]
gi|298507249|gb|ADI85972.1| NHL repeat domain protein [Geobacter sulfurreducens KN400]
Length = 365
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 126/273 (46%), Gaps = 26/273 (9%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------AFTWPRGIAVGP 107
F P GI + + + DS RV + DLK L P GIA
Sbjct: 95 FIRPHGI-LADEQIFALVDSGAGRVHL----IDLKRGTYRLLPEEGKTPMVSPIGIARDS 149
Query: 108 DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNH 166
+I V DS + F DG F ++ + L P IA + T + V+++ H
Sbjct: 150 RGAIYVTDSGTGLIHRFSDDGD---SFVALDLRP--LHRPTGIAFNPVTGLLYVAETGAH 204
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
R+ FD S G + G G + G P +AV R++V+DS N R+QIF
Sbjct: 205 RIVAFD-------SAGKETLRIGGSGMEPGAFNFPTDLAVMADGRLLVTDSLNSRIQIFT 257
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+G+ SFG G G+ P+GVAVD +G+I V DS + +QIF G+ L AFG G
Sbjct: 258 ADGKPAGSFGEAGDTPGRFTRPKGVAVDSEGHIYVCDSQQDMVQIFDETGRLLLAFGDKG 317
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
S G+F G+ + +N I V D N R+QVF
Sbjct: 318 SLPGQFWMPSGIHI-ANDMIYVSDTYNQRVQVF 349
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 69/136 (50%), Gaps = 10/136 (7%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------ 96
+IG G EPG F +P +AV D ++V DS N R+Q+ D K F
Sbjct: 217 LRIGGSGMEPGAFNFPTDLAVMADGRLLVTDSLNSRIQIF--TADGKPAGSFGEAGDTPG 274
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
FT P+G+AV + I V DS VQ+F G + FG G+ GQ P I ++N
Sbjct: 275 RFTRPKGVAVDSEGHIYVCDSQQDMVQIFDETGRLLLAFGDKGSLPGQFWMPSGIHIAN- 333
Query: 156 NRVIVSDSNNHRVQIF 171
+ + VSD+ N RVQ+F
Sbjct: 334 DMIYVSDTYNQRVQVF 349
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 16/90 (17%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT------- 98
G G PG FT P+G+AV + I V DS VQ+ FD +T + LAF
Sbjct: 267 GEAGDTPGRFTRPKGVAVDSEGHIYVCDSQQDMVQI----FD-ETGRLLLAFGDKGSLPG 321
Query: 99 --W-PRGIAVGPDNSIVVADSSNHRVQVFQ 125
W P GI + ++ I V+D+ N RVQVF+
Sbjct: 322 QFWMPSGIHIA-NDMIYVSDTYNQRVQVFR 350
>gi|260824866|ref|XP_002607388.1| hypothetical protein BRAFLDRAFT_69798 [Branchiostoma floridae]
gi|229292735|gb|EEN63398.1| hypothetical protein BRAFLDRAFT_69798 [Branchiostoma floridae]
Length = 614
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 130/271 (47%), Gaps = 56/271 (20%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA----- 151
F P G V + I VAD N R+QVF GTF+ +F ++ ++ Q+E P +A
Sbjct: 349 FKSPLGATVSDEGEIFVADQGNQRIQVFTLQGTFLRQFPTIVSEEHQME-PGDVARDGEG 407
Query: 152 ----------------------------VSNTN--RVIVSDSNNHRVQIFDVNG------ 175
+ NT R + D+ + + I + G
Sbjct: 408 NLWVVGWTESADFAVQYNKQGRVLRKFDLQNTGWYRGVAVDTRRNHILITQITGGKDNTH 467
Query: 176 ---RVFQSDGTFV----GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
VF+ DG+ V GK+GS + +++ P YI V V+VSD+ NH + + + +
Sbjct: 468 GEVLVFKPDGSLVRSVEGKWGSFLWRRQEMKKPRYITVDGEGNVLVSDNGNHCIHVCNED 527
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G+ + FG EGS +GQLK+P G+ D G I V D GN+R+++F G+FL+
Sbjct: 528 GQFMFQFGGEGSGKGQLKYPFGICTDRAGNIIVADPGNSRVEMFDKTGRFLKHI-----A 582
Query: 289 DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
K LE VA++++G ++V D NH++ +F
Sbjct: 583 TNMGKPLE-VAMVTHGQLVVTD-SNHKVSIF 611
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 47/233 (20%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK------ 187
FG G+++GQ + P VS+ + V+D N R+Q+F + G + T V +
Sbjct: 339 FGEYGSESGQFKSPLGATVSDEGEIFVADQGNQRIQVFTLQGTFLRQFPTIVSEEHQMEP 398
Query: 188 ---------------------FGSMGNKAGQ------LEHPHY---IAV-SNTNRVIVS- 215
F NK G+ L++ + +AV + N ++++
Sbjct: 399 GDVARDGEGNLWVVGWTESADFAVQYNKQGRVLRKFDLQNTGWYRGVAVDTRRNHILITQ 458
Query: 216 -----DSNNHRVQIFDVNGRVITS----FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
D+ + V +F +G ++ S +GS ++K PR + VD +G + V D+GN
Sbjct: 459 ITGGKDNTHGEVLVFKPDGSLVRSVEGKWGSFLWRRQEMKKPRYITVDGEGNVLVSDNGN 518
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ I + DGQF+ FG GSG G+ K G+ GNI+V D N R+++F
Sbjct: 519 HCIHVCNEDGQFMFQFGGEGSGKGQLKYPFGICTDRAGNIIVADPGNSRVEMF 571
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 30/185 (16%)
Query: 57 WPRGIAVGPD-NSIVVA------DSSNHRVQVCFPHFDL--KTNCVFLAFTW-------P 100
W RG+AV N I++ D+++ V V P L + +F W P
Sbjct: 441 WYRGVAVDTRRNHILITQITGGKDNTHGEVLVFKPDGSLVRSVEGKWGSFLWRRQEMKKP 500
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
R I V + +++V+D+ NH + V DG F+ +FG G+ GQL++P I +IV
Sbjct: 501 RYITVDGEGNVLVSDNGNHCIHVCNEDGQFMFQFGGEGSGKGQLKYPFGICTDRAGNIIV 560
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+D N RV++FD GR + T +GK P +A+ +++V+DS NH
Sbjct: 561 ADPGNSRVEMFDKTGRFLKHIATNMGK-------------PLEVAMVTHGQLVVTDS-NH 606
Query: 221 RVQIF 225
+V IF
Sbjct: 607 KVSIF 611
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 31/49 (63%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
+FG GSE GQ K P G V D+G I V D GN RIQ+FT G FLR F
Sbjct: 338 TFGEYGSESGQFKSPLGATVSDEGEIFVADQGNQRIQVFTLQGTFLRQF 386
>gi|443691534|gb|ELT93363.1| hypothetical protein CAPTEDRAFT_227568, partial [Capitella teleta]
Length = 1037
Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats.
Identities = 76/246 (30%), Positives = 124/246 (50%), Gaps = 29/246 (11%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF------- 94
+F+ + + GC P GIA P+ SI++ D N +++ FD + + ++
Sbjct: 695 KFQPKTFKDQKGC--KPTGIAALPNGSILIVDDINKKLK----QFDQQGHLLWECAPSDE 748
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
AF P +AV + + V D S H V++F +G F+ +FGSM L+ IA +
Sbjct: 749 HAFVDPWDVAVTKEGNYAVTDRSLHLVKMFDRNGEFINEFGSM-----HLQSAWGIACDS 803
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL-EHPHYIAVSNTNRVI 213
R+IV+D+ V +FD S GT + ++ N+ QL + P Y+ V++ + +I
Sbjct: 804 RGRIIVTDATQKSVLVFD-------SVGTLLF---TISNRDRQLFKCPEYVTVNSNDDII 853
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
VSD + H + +FD GR++ +FG +G+ P GV D I V D N RI T
Sbjct: 854 VSDFDKHCILVFDPTGRMLFTFGQKGAGALDFNVPCGVCTDSDTNILVADYTNQRITKLT 913
Query: 274 PDGQFL 279
+G+FL
Sbjct: 914 RNGEFL 919
Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 68/217 (31%), Positives = 100/217 (46%), Gaps = 16/217 (7%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GIA P+ SI++ D N +++ F G + + A P +AV+
Sbjct: 709 PTGIAALPNGSILIVDDINKKLKQFDQQGHLLWECAPSDEHA--FVDPWDVAVTKEGNYA 766
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D + H V++FD NG F+ +FGSM L+ IA + R+IV+D+
Sbjct: 767 VTDRSLHLVKMFDRNGE-------FINEFGSM-----HLQSAWGIACDSRGRIIVTDATQ 814
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
V +FD G ++ F + K P V V+ I V D + I +F P G+ L
Sbjct: 815 KSVLVFDSVGTLL--FTISNRDRQLFKCPEYVTVNSNDDIIVSDFDKHCILVFDPTGRML 872
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
FG G+G +F GV S+ NILV D N RI
Sbjct: 873 FTFGQKGAGALDFNVPCGVCTDSDTNILVADYTNQRI 909
>gi|292491741|ref|YP_003527180.1| NHL repeat containing protein [Nitrosococcus halophilus Nc4]
gi|291580336|gb|ADE14793.1| NHL repeat containing protein [Nitrosococcus halophilus Nc4]
Length = 324
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 111/232 (47%), Gaps = 18/232 (7%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P GIAV + + VADS N R+QVF G F + G G GQL P + ++ +
Sbjct: 51 FNEPTGIAVT-ETEVFVADSRNARIQVFDYGGHFKRQLGGRGEGPGQLGRPMNLVIAG-D 108
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ V+D N R+Q+F + DGT G G+ G+ P +A++ + V+D
Sbjct: 109 ELYVADYWNDRIQVFGL-------DGTPQRVIGHSGSGPGEFNAPGGVAIAPDGDLYVAD 161
Query: 217 SNNHRVQIFDVNGRVITSFGS---EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
N R+Q +G I +G G GQ +P VA+ +G + V D +RIQ+F
Sbjct: 162 FYNQRIQQLRADGSFIQQWGETSNPGWRAGQFIYPTDVALSPKGTLYVADGYADRIQVFA 221
Query: 274 PDGQFLRAFG------CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
PDG F +G +G +G F + + V G + V D N+RIQ F
Sbjct: 222 PDGTFSHKWGGPLAINLFGPFNGWFTTVTSLTVGPQGQVYVADFYNNRIQKF 273
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 134/301 (44%), Gaps = 37/301 (12%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAF 97
RL G +G+ PG F P GIAV + + VADS N R+QV HF +
Sbjct: 36 RLVAVWGEKGTGPGQFNEPTGIAVT-ETEVFVADSRNARIQVFDYGGHFKRQLGG----- 89
Query: 98 TWPRGIAVG----PDNSIV------VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHP 147
RG G P N ++ VAD N R+QVF DGT G G+ G+ P
Sbjct: 90 ---RGEGPGQLGRPMNLVIAGDELYVADYWNDRIQVFGLDGTPQRVIGHSGSGPGEFNAP 146
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN---KAGQLEHPHYI 204
+A++ + V+D N R+Q ++DG+F+ ++G N +AGQ +P +
Sbjct: 147 GGVAIAPDGDLYVADFYNQRIQ-------QLRADGSFIQQWGETSNPGWRAGQFIYPTDV 199
Query: 205 AVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSE------GSEEGQLKFPRGVAVDDQGY 258
A+S + V+D R+Q+F +G +G G G + V QG
Sbjct: 200 ALSPKGTLYVADGYADRIQVFAPDGTFSHKWGGPLAINLFGPFNGWFTTVTSLTVGPQGQ 259
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
+ V D NNRIQ FT G+FL FG + V V G + V D N+R+Q
Sbjct: 260 VYVADFYNNRIQKFTSGGKFLTGFGLKDTPRHRPGTAIAVVVAPKGTVFVADFANNRVQK 319
Query: 319 F 319
+
Sbjct: 320 W 320
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 114/249 (45%), Gaps = 30/249 (12%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------- 95
++G RG PG P + + D + VAD N R+QV F L +
Sbjct: 86 QLGGRGEGPGQLGRPMNLVIAGD-ELYVADYWNDRIQV----FGLDGTPQRVIGHSGSGP 140
Query: 96 -AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGN---KAGQLEHPHYIA 151
F P G+A+ PD + VAD N R+Q ++DG+F+ ++G N +AGQ +P +A
Sbjct: 141 GEFNAPGGVAIAPDGDLYVADFYNQRIQQLRADGSFIQQWGETSNPGWRAGQFIYPTDVA 200
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGS------MGNKAGQLEHPHYIA 205
+S + V+D R+Q VF DGTF K+G G G +
Sbjct: 201 LSPKGTLYVADGYADRIQ-------VFAPDGTFSHKWGGPLAINLFGPFNGWFTTVTSLT 253
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG 265
V +V V+D N+R+Q F G+ +T FG + + + V V +G + V D
Sbjct: 254 VGPQGQVYVADFYNNRIQKFTSGGKFLTGFGLKDTPRHRPGTAIAVVVAPKGTVFVADFA 313
Query: 266 NNRIQIFTP 274
NNR+Q + P
Sbjct: 314 NNRVQKWRP 322
>gi|406832436|ref|ZP_11092030.1| ABC transporter [Schlesneria paludicola DSM 18645]
Length = 635
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 126/264 (47%), Gaps = 15/264 (5%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT--WPRGIAVGPDNSIVVAD 115
PRGI V DN +V D++ RV V + DL ++ GI V D I VAD
Sbjct: 377 PRGITVSSDNEYLVLDNAG-RVLVFNENGDLTRQWWMPEYSVGKAEGICVLKDGRIAVAD 435
Query: 116 SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD-SNNHRVQIFDVN 174
+ HR+ F DG G FG G+ G +P I + + + + + N RVQ
Sbjct: 436 THYHRIVFFNHDGEVTGMFGQRGSGEGDFVYPVSIIQAPDDFIYICEYGQNDRVQ----- 490
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
F+ DGTFV +FG G + GQ + P IA + + + V D+ N+RVQ+F G+++
Sbjct: 491 --KFRPDGTFVLQFGGAGTEPGQFQRPSGIAWYD-HELFVVDAFNNRVQVFSEEGQLLRI 547
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD--GEF 292
G + G + +P + V+ +G + V + G R+ FT G+ L +G G G +F
Sbjct: 548 MG-DSENAGAVHYPYDITVNPRGELFVVEYGAGRVTKFTRQGKLLGRYGHSGPGQTLAQF 606
Query: 293 KGLEGVAVMSNGNILVCDRENHRI 316
G+ + + VCD N R+
Sbjct: 607 STPWGLTIDRRNRLYVCDTGNRRV 630
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 125 QSDGTFVGKFGS---MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSD 181
QS+ T K S M ++ P I VS+ N +V D N RV +F+ NG + +
Sbjct: 352 QSEPTLSVKRESNWMMPPDGHRVPAPRGITVSSDNEYLVLD-NAGRVLVFNENGDLTRQ- 409
Query: 182 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSE 241
++ ++ S+G G I V R+ V+D++ HR+ F+ +G V FG GS
Sbjct: 410 -WWMPEY-SVGKAEG-------ICVLKDGRIAVADTHYHRIVFFNHDGEVTGMFGQRGSG 460
Query: 242 EGQLKFPRGVAVDDQGYISVGDSG-NNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
EG +P + +I + + G N+R+Q F PDG F+ FG G+ G+F+ G+A
Sbjct: 461 EGDFVYPVSIIQAPDDFIYICEYGQNDRVQKFRPDGTFVLQFGGAGTEPGQFQRPSGIA- 519
Query: 301 MSNGNILVCDRENHRIQVF 319
+ + V D N+R+QVF
Sbjct: 520 WYDHELFVVDAFNNRVQVF 538
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 52/226 (23%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAV 105
G RGS G F +P I PD+ I + +
Sbjct: 455 GQRGSGEGDFVYPVSIIQAPDDFIYICEYGQ----------------------------- 485
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
N RVQ F+ DGTFV +FG G + GQ + P IA + + + V D+ N
Sbjct: 486 ------------NDRVQKFRPDGTFVLQFGGAGTEPGQFQRPSGIAWYD-HELFVVDAFN 532
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
+RVQ+F G++ + G AG + +P+ I V+ + V + RV F
Sbjct: 533 NRVQVFSEEGQLLRIMGD--------SENAGAVHYPYDITVNPRGELFVVEYGAGRVTKF 584
Query: 226 DVNGRVITSFGSEGSEE--GQLKFPRGVAVDDQGYISVGDSGNNRI 269
G+++ +G G + Q P G+ +D + + V D+GN R+
Sbjct: 585 TRQGKLLGRYGHSGPGQTLAQFSTPWGLTIDRRNRLYVCDTGNRRV 630
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 62/138 (44%), Gaps = 17/138 (12%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
LQF G G+EPG F P GIA D+ + V D+ N+RVQV F + + +
Sbjct: 500 LQF--GGAGTEPGQFQRPSGIAWY-DHELFVVDAFNNRVQV----FSEEGQLLRIMGDSE 552
Query: 96 ---AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM--GNKAGQLEHPHYI 150
A +P I V P + V + RV F G +G++G G Q P +
Sbjct: 553 NAGAVHYPYDITVNPRGELFVVEYGAGRVTKFTRQGKLLGRYGHSGPGQTLAQFSTPWGL 612
Query: 151 AVSNTNRVIVSDSNNHRV 168
+ NR+ V D+ N RV
Sbjct: 613 TIDRRNRLYVCDTGNRRV 630
>gi|260806062|ref|XP_002597904.1| hypothetical protein BRAFLDRAFT_234182 [Branchiostoma floridae]
gi|229283173|gb|EEN53916.1| hypothetical protein BRAFLDRAFT_234182 [Branchiostoma floridae]
Length = 716
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 145/291 (49%), Gaps = 37/291 (12%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV----FLAFTWP 100
IG GS+ G F+ P G+ V D I VAD N+RVQ F ++ C+ L P
Sbjct: 445 IGIGGSDVGKFSGPSGVFVIADE-IYVADQDNNRVQA----FSMRGECLGELPTLVSASP 499
Query: 101 RGIAVG---PDNSIVVADSSNHRVQVFQSDGT---FVGKFGSMGNKAGQLEHPHY----- 149
+ G P VA +N + V SDG F+ ++ G +++ P
Sbjct: 500 QSPTKGKPVPMEPHDVAVDTNDNIWVVGSDGMTSDFILRYDMEGRPLTKIDLPFTGYWRG 559
Query: 150 IAVSNTNR-VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 208
IAV + ++VS+ V++F GT + ++G ++G L+ P Y+AV N
Sbjct: 560 IAVHAHRKFIVVSEPFGGEVKLF------APPRGTLIR---TLGGESG-LKAPWYVAVDN 609
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
++ VSD + H + +F NG+++ FG EGSEEGQL+ P GV VD G I V DS N R
Sbjct: 610 DGKIYVSDWSGHYIYVFQDNGKMLLRFGGEGSEEGQLQCPCGVCVDSDGNIIVADSLNQR 669
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+++F G F++ + +G + VA++ +G I+V + + + + ++
Sbjct: 670 VEMFDKAGTFVKHIAT------DLQGPQAVAMVKDGTIVVTETDKNSVSIY 714
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
++ + G GSE G P G+ V D +I+VADS N RV++ F +
Sbjct: 631 KMLLRFGGEGSEEGQLQCPCGVCVDSDGNIIVADSLNQRVEM-FDKAGTFVKHIATDLQG 689
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+ +A+ D +IVV ++ + V ++
Sbjct: 690 PQAVAMVKDGTIVVTETDKNSVSIYH 715
>gi|284039570|ref|YP_003389500.1| NHL repeat containing protein [Spirosoma linguale DSM 74]
gi|283818863|gb|ADB40701.1| NHL repeat containing protein [Spirosoma linguale DSM 74]
Length = 1079
Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats.
Identities = 78/227 (34%), Positives = 110/227 (48%), Gaps = 13/227 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQS---DGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
P GI V S+ VAD +NHRVQ + S GT V G+ G+ A QL HP + V
Sbjct: 78 PFGIYVDEAGSMYVADYNNHRVQKWASGATSGTTVAGTGTAGSAANQLNHPLGVYVDGAG 137
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ VSD++N+RVQ + + GT V G+ G+ A QL +P I V V+D
Sbjct: 138 AIYVSDTDNNRVQKWASGA----TSGTTVAGTGTAGSAANQLNYPIGIYVDGAGATYVAD 193
Query: 217 SNNHRVQIF---DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
++N R+Q + +G + +GS QL GV +D G I V D GNNRIQ +
Sbjct: 194 ASNSRIQKWAAGATSGTTVAGGNGQGSAANQLWSAAGVYIDGAGAIYVADGGNNRIQKWA 253
Query: 274 P---DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
G + G +G + V V G + V D+++HRIQ
Sbjct: 254 SGATSGTTVAGTGVYGPASNQLSYPFAVYVDGAGTMYVSDQQSHRIQ 300
Score = 95.9 bits (237), Expect = 2e-17, Method: Composition-based stats.
Identities = 66/200 (33%), Positives = 95/200 (47%), Gaps = 10/200 (5%)
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGT 183
+ S+ V G+ G+ A QL+ P I V + V+D NNHRVQ + + GT
Sbjct: 55 YNSNAVTVAGTGTAGSAANQLDSPFGIYVDEAGSMYVADYNNHRVQKWASGA----TSGT 110
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF---DVNGRVITSFGSEGS 240
V G+ G+ A QL HP + V + VSD++N+RVQ + +G + G+ GS
Sbjct: 111 TVAGTGTAGSAANQLNHPLGVYVDGAGAIYVSDTDNNRVQKWASGATSGTTVAGTGTAGS 170
Query: 241 EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP---DGQFLRAFGCWGSGDGEFKGLEG 297
QL +P G+ VD G V D+ N+RIQ + G + GS + G
Sbjct: 171 AANQLNYPIGIYVDGAGATYVADASNSRIQKWAAGATSGTTVAGGNGQGSAANQLWSAAG 230
Query: 298 VAVMSNGNILVCDRENHRIQ 317
V + G I V D N+RIQ
Sbjct: 231 VYIDGAGAIYVADGGNNRIQ 250
Score = 89.0 bits (219), Expect = 3e-15, Method: Composition-based stats.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 19/243 (7%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--------F 97
G+ GS P G+ V +I V+D+ N+RVQ T
Sbjct: 116 GTAGSAANQLNHPLGVYVDGAGAIYVSDTDNNRVQKWASGATSGTTVAGTGTAGSAANQL 175
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQ---SDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
+P GI V + VAD+SN R+Q + + GT V G+ A QL + +
Sbjct: 176 NYPIGIYVDGAGATYVADASNSRIQKWAAGATSGTTVAGGNGQGSAANQLWSAAGVYIDG 235
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ V+D N+R+Q + + GT V G G + QL +P + V + V
Sbjct: 236 AGAIYVADGGNNRIQKWASGA----TSGTTVAGTGVYGPASNQLSYPFAVYVDGAGTMYV 291
Query: 215 SDSNNHRVQIFDVNGRVITS----FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
SD +HR+Q + T+ +G++ QL +PRG+ +D G I V D NNRIQ
Sbjct: 292 SDQQSHRIQKWTAGATSGTTVAGGYGNDALVPYQLNYPRGIYLDRAGAIYVADQRNNRIQ 351
Query: 271 IFT 273
F+
Sbjct: 352 KFS 354
>gi|291243275|ref|XP_002741528.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 745
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 140/285 (49%), Gaps = 26/285 (9%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIA 104
IG GS G + P G+ V + IV A+ N R+Q+ + K N + + P G+
Sbjct: 475 IGKNGSGKGEYNLPVGVTVDKNGDIVTAERGNKRLQITDKDGNYK-NIIKIEKCIPSGLC 533
Query: 105 VGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDS 163
+ + + D N +V + +G + +F ++HP I V + V VSD
Sbjct: 534 IF-NGKYYMTDLDNAQVVISDMNGHVIKRFSE------NMKHPIRIVVRPADGMVYVSDW 586
Query: 164 NNHRVQIFDVNG------RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
+ ++I D R + DG ++ FG G++A Q + P ++AV N + V D
Sbjct: 587 D---LKIGDKTNKDGHLIRKYTKDGDYIKSFGGYGSEARQFKGPSFMAVDNHGLLFVGDY 643
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NN+R+Q+++ + + SF G +EGQ+ PRG+A+D +GY+ V + NN++Q F G+
Sbjct: 644 NNNRIQVYNTDDEYMYSFNCPGQDEGQIYGPRGIAIDKEGYVYVVNY-NNKVQKFDRSGR 702
Query: 278 FLRAFGCWGSGDGE-FKGLEGVAVMSN--GNILVCDRENHRIQVF 319
F+ C D + VAV + ++V DR NH +++F
Sbjct: 703 FI----CRIDKDTDGLNSPSDVAVTDDVPCRVVVVDRNNHCVKIF 743
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 225 FDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF---LRA 281
F+V ++ + G GS +G+ P GV VD G I + GN R+QI DG + ++
Sbjct: 465 FNVIKGLVKTIGKNGSGKGEYNLPVGVTVDKNGDIVTAERGNKRLQITDKDGNYKNIIKI 524
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
C SG F G + + N +++ D H I+ F
Sbjct: 525 EKCIPSGLCIFNGKYYMTDLDNAQVVISDMNGHVIKRF 562
>gi|326321766|gb|ADZ53883.1| tripartite motif-containing protein 71 [Elaphurus davidianus]
Length = 250
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 111/215 (51%), Gaps = 16/215 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 52 VVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI--- 96
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R+
Sbjct: 97 -ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRI 155
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQ+FT +GQFL F
Sbjct: 156 QVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLKF 215
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
G G+ +G+F VAV S G ILV D H IQ
Sbjct: 216 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRKHPIQ 250
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 79/124 (63%), Gaps = 7/124 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G++V + IVVAD SN+R+QVF+ G F KFG++G++ GQ + P +A + R++
Sbjct: 134 PWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIV 193
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+Q+F G+ F+ KFG G K GQ +P +AV++ +++VSD+
Sbjct: 194 VADKDNHRIQVFTFEGQ-------FLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRK 246
Query: 220 HRVQ 223
H +Q
Sbjct: 247 HPIQ 250
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 81/148 (54%), Gaps = 17/148 (11%)
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT----- 233
Q +GT+V + QLE H ++V+ N+ I N ++ +GR
Sbjct: 68 QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI----ENSPFKVVVKSGRSYVGIGLP 117
Query: 234 --SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
SFGSEG +G+L P GV+VD +GYI V D NNRIQ+F P G F FG GS G+
Sbjct: 118 GLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQ 177
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F GVA ++ I+V D++NHRIQVF
Sbjct: 178 FDRPAGVACDASRRIVVADKDNHRIQVF 205
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 5/132 (3%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 119 LSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 178
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+QVF +G F+ KFG G K GQ +P +AV++ +
Sbjct: 179 DRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 238
Query: 158 VIVSDSNNHRVQ 169
++VSD+ H +Q
Sbjct: 239 ILVSDTRKHPIQ 250
>gi|260785720|ref|XP_002587908.1| hypothetical protein BRAFLDRAFT_87296 [Branchiostoma floridae]
gi|229273063|gb|EEN43919.1| hypothetical protein BRAFLDRAFT_87296 [Branchiostoma floridae]
Length = 1403
Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats.
Identities = 72/253 (28%), Positives = 112/253 (44%), Gaps = 55/253 (21%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM-GNKAGQLEHPHYIAVSN- 154
F +PRG+ V P N I VAD +N RVQV ++G ++ F ++ ++ PH + +
Sbjct: 1114 FDFPRGVVVSPSNDIFVADYNNRRVQVHSTEGVYLRHFPTVVPGTEDKVMKPHDVCMDGN 1173
Query: 155 --------------------------------------------TNRVIVSDSNNHRVQI 170
TN ++++D++ VQI
Sbjct: 1174 GTLWVVGRGWTADHVVQYSTDGTAMAGIDLEKIDYFRGITVDMRTNHILITDADQDEVQI 1233
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
F + DG+ V + G++ P Y+ V ++VSD + H V ++D +G+
Sbjct: 1234 F-------RPDGSLVRTVRH--PRGGEMTDPRYVTVDGEGNILVSDWDTHYVYVYDESGK 1284
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+ FG EGS E QL PRG+ D G+I V D N R+QIFT G+F+R G
Sbjct: 1285 FLFQFGGEGSGEVQLDCPRGICTDSSGHIIVADFWNERVQIFTRHGEFVRTVRTGFGPIG 1344
Query: 291 EFKGLEGVAVMSN 303
G EG V++N
Sbjct: 1345 LAVGPEGQLVVTN 1357
>gi|260780778|ref|XP_002585517.1| hypothetical protein BRAFLDRAFT_258544 [Branchiostoma floridae]
gi|229270512|gb|EEN41528.1| hypothetical protein BRAFLDRAFT_258544 [Branchiostoma floridae]
Length = 203
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 115/220 (52%), Gaps = 18/220 (8%)
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P GI V + I+V+DS N + ++Q +G F+ KF + GQL P + ++ +
Sbjct: 2 YPTGITVDNKDYILVSDSHNAYIYMYQENGRFLLKFAGKESNNGQLNLPIDLCTDSSRHI 61
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
IV+DS N RV++F G++ + T V P I ++ ++++S+S+
Sbjct: 62 IVADSGNQRVELFTSRGKLIRHIATDVD--------------PLSIVMATEGQLVMSESS 107
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
++V++F +NG ++ SFG L +P G+ VD++ YI V DS I ++ +G+F
Sbjct: 108 KNKVKVFGMNGMLVRSFGRRQG----LMYPTGITVDNKDYILVADSHTAYIYMYQENGRF 163
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
L F GS +G+ + S +I+V D N R+++
Sbjct: 164 LLKFAGKGSNNGQLSLPIDLCTDSYRHIIVADSGNQRVEL 203
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 35/226 (15%)
Query: 57 WPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----------FTWPRGIAV 105
+P GI V + I+V+DS N + + + N FL P +
Sbjct: 2 YPTGITVDNKDYILVSDSHNAYI------YMYQENGRFLLKFAGKESNNGQLNLPIDLCT 55
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
I+VADS N RV++F S G + + + P I ++ ++++S+S+
Sbjct: 56 DSSRHIIVADSGNQRVELFTSRGKLIRHIATDVD-------PLSIVMATEGQLVMSESSK 108
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
++V++F +NG + + S G + G L +P I V N + ++V+DS+ + ++
Sbjct: 109 NKVKVFGMNGMLVR----------SFGRRQG-LMYPTGITVDNKDYILVADSHTAYIYMY 157
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
NGR + F +GS GQL P + D +I V DSGN R+++
Sbjct: 158 QENGRFLLKFAGKGSNNGQLSLPIDLCTDSYRHIIVADSGNQRVEL 203
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 13/191 (6%)
Query: 34 QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV 93
Y + R K + S G P + I+VADS N RV++ L +
Sbjct: 26 MYQENGRFLLKFAGKESNNGQLNLPIDLCTDSSRHIIVADSGNQRVELFTSRGKLIRHIA 85
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
P I + + +V+++SS ++V+VF +G V FG + L +P I V
Sbjct: 86 --TDVDPLSIVMATEGQLVMSESSKNKVKVFGMNGMLVRSFG----RRQGLMYPTGITVD 139
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
N + ++V+DS H I+ ++Q +G F+ KF G+ GQL P + + +I
Sbjct: 140 NKDYILVADS--HTAYIY-----MYQENGRFLLKFAGKGSNNGQLSLPIDLCTDSYRHII 192
Query: 214 VSDSNNHRVQI 224
V+DS N RV++
Sbjct: 193 VADSGNQRVEL 203
>gi|291225424|ref|XP_002732700.1| PREDICTED: MGC80218 protein-like [Saccoglossus kowalevskii]
Length = 755
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 132/271 (48%), Gaps = 47/271 (17%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN------CVF 94
L+ +G+ G G F WP G+ V I VAD N+RVQ+ + K + F
Sbjct: 473 LEKSLGTYGEGSGNFNWPLGVTVTAHGDIAVADQRNYRVQIIDRNGKEKMSIHNEGTVTF 532
Query: 95 LAF--TWPRGIAVGPDNSIVVADSSN------------------HRVQVFQSDGTFVGKF 134
++P +A+ D ++ D + ++V V G + F
Sbjct: 533 FGIKKSYPIDVAISKDGRYLITDGNKAYSGKTSLRFRKTEGCNFNQVLVCNQSGRLISCF 592
Query: 135 GSMGNKAGQLEHPHYIAVSNTNRV--IVSDSNNHRVQIFDVNGRVFQSDG-TFVGKFGSM 191
G +L +P IA+S++ ++ IV +S N + V+++D T+V FG
Sbjct: 593 GK-----NELRNPCGIAISDSRKLAYIVDESANCVL--------VYETDSYTYVKSFGK- 638
Query: 192 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGV 251
G L P +IAV+N + +IVSD+++H V++F+ G + SFGS GSE+G+ +P GV
Sbjct: 639 ----GHLHGPTFIAVNNKDDIIVSDTHHHCVKVFNCEGELSFSFGSRGSEDGKFLYPFGV 694
Query: 252 AVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
A D+ G I V D GN+RI IF G+ + +
Sbjct: 695 ATDNHGNIYVCDYGNSRIVIFDFRGELITSI 725
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 28/240 (11%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDG---TFVGKFGSMGNKAGQLEHPHYIAVS 153
F WP G+ V I VAD N+RVQ+ +G + G++ + +P +A+S
Sbjct: 487 FNWPLGVTVTAHGDIAVADQRNYRVQIIDRNGKEKMSIHNEGTVTFFGIKKSYPIDVAIS 546
Query: 154 NTNRVIVSDSNNHRVQIFDVNGR-----------VFQSDGTFVGKFGSMGNKAGQLEHPH 202
R +++D N + R V G + FG +L +P
Sbjct: 547 KDGRYLITDGNKAYSGKTSLRFRKTEGCNFNQVLVCNQSGRLISCFGK-----NELRNPC 601
Query: 203 YIAVSNTNRV--IVSDSNNHRVQIFDVNGRV-ITSFGSEGSEEGQLKFPRGVAVDDQGYI 259
IA+S++ ++ IV +S N V +++ + + SFG +G L P +AV+++ I
Sbjct: 602 GIAISDSRKLAYIVDESANC-VLVYETDSYTYVKSFG-----KGHLHGPTFIAVNNKDDI 655
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V D+ ++ +++F +G+ +FG GS DG+F GVA ++GNI VCD N RI +F
Sbjct: 656 IVSDTHHHCVKVFNCEGELSFSFGSRGSEDGKFLYPFGVATDNHGNIYVCDYGNSRIVIF 715
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 96/189 (50%), Gaps = 31/189 (16%)
Query: 67 NSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIV-VADSSNHRVQVFQ 125
N ++V + S R+ CF +L+ C GIA+ + + D S + V V++
Sbjct: 577 NQVLVCNQSG-RLISCFGKNELRNPC---------GIAISDSRKLAYIVDESANCVLVYE 626
Query: 126 SDG-TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTF 184
+D T+V FG G L P +IAV+N + +IVSD+++H V++F+ G + S
Sbjct: 627 TDSYTYVKSFGK-----GHLHGPTFIAVNNKDDIIVSDTHHHCVKVFNCEGELSFS---- 677
Query: 185 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQ 244
FGS G++ G+ +P +A N + V D N R+ IFD G +ITS +
Sbjct: 678 ---FGSRGSEDGKFLYPFGVATDNHGNIYVCDYGNSRIVIFDFRGELITSI-------KE 727
Query: 245 LKFPRGVAV 253
+ +P G+AV
Sbjct: 728 VPWPTGIAV 736
>gi|260785786|ref|XP_002587941.1| hypothetical protein BRAFLDRAFT_87329 [Branchiostoma floridae]
gi|229273096|gb|EEN43952.1| hypothetical protein BRAFLDRAFT_87329 [Branchiostoma floridae]
Length = 1101
Score = 108 bits (271), Expect = 2e-21, Method: Composition-based stats.
Identities = 75/269 (27%), Positives = 118/269 (43%), Gaps = 62/269 (23%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH-PHYIAVSN- 154
F++PRG+ V P N I VAD N RVQV+ ++G ++ F ++ G + PH + +
Sbjct: 846 FSYPRGVVVSPSNEIYVADKDNRRVQVYSTEGVYLRHFPTVVPGTGDKDMAPHDVCLDGN 905
Query: 155 --------------------------------------------TNRVIVSDSNNHRVQI 170
+N ++V+D++ V
Sbjct: 906 GTLWVVGLGETAEHVVQYSTDGTAMAGFDLEIGIYFHGIAMDIRSNHILVTDADQGEVH- 964
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VF+ DG+ V +AG++ P Y+ V +VSD + + V ++D +G+
Sbjct: 965 ------VFRPDGSLVRTVRH--PRAGEMTRPGYVTVDGEGNFLVSDWDTYCVYVYDESGK 1016
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+ FG GS EGQL P G+ D G I + DS N RIQIFT G+F+R +
Sbjct: 1017 FLFQFGGYGSGEGQLASPHGICTDSSGNIIMADSWNERIQIFTRHGEFVRTIRTESTP-- 1074
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
EG+AV G ++V + + I VF
Sbjct: 1075 -----EGLAVGPEGQLVVTSQWKNTITVF 1098
Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/138 (39%), Positives = 76/138 (55%), Gaps = 13/138 (9%)
Query: 144 LEHPHY---IAVS-NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE 199
LE HY IAV TN ++V+D++ VQ VF+ DG+ V + G++
Sbjct: 6 LEKGHYFRGIAVDMRTNHILVTDADQCAVQ-------VFRPDGSLVRTVRH--PRGGEMT 56
Query: 200 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYI 259
HP Y+ V ++V+D NH V ++D G+ + FG GS EGQL PRG+ D G+I
Sbjct: 57 HPWYVTVDGEGNILVTDLINHCVYVYDEFGKFLFQFGGLGSGEGQLNEPRGICTDSSGHI 116
Query: 260 SVGDSGNNRIQIFTPDGQ 277
V D GN RIQIFT G+
Sbjct: 117 LVADYGNKRIQIFTCHGE 134
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 10/132 (7%)
Query: 101 RGIAVG-PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
RGIAV N I+V D+ VQVF+ DG+ V + G++ HP Y+ V ++
Sbjct: 13 RGIAVDMRTNHILVTDADQCAVQVFRPDGSLVRTVRH--PRGGEMTHPWYVTVDGEGNIL 70
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D NH V ++D G+ F+ +FG +G+ GQL P I ++ ++V+D N
Sbjct: 71 VTDLINHCVYVYDEFGK-------FLFQFGGLGSGEGQLNEPRGICTDSSGHILVADYGN 123
Query: 220 HRVQIFDVNGRV 231
R+QIF +G +
Sbjct: 124 KRIQIFTCHGEM 135
Score = 72.4 bits (176), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
Query: 198 LEHPHY---IAVS-NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
LE HY IAV TN ++V+D++ VQ+F +G ++ + G++ P V V
Sbjct: 6 LEKGHYFRGIAVDMRTNHILVTDADQCAVQVFRPDGSLVRTV--RHPRGGEMTHPWYVTV 63
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
D +G I V D N+ + ++ G+FL FG GSG+G+ G+ S+G+ILV D N
Sbjct: 64 DGEGNILVTDLINHCVYVYDEFGKFLFQFGGLGSGEGQLNEPRGICTDSSGHILVADYGN 123
Query: 314 HRIQVF 319
RIQ+F
Sbjct: 124 KRIQIF 129
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 59 RGIAVG-PDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---AFTWPRGIAVGPDNSIVVA 114
RGIAV N I+V D+ VQV P L T P + V + +I+V
Sbjct: 13 RGIAVDMRTNHILVTDADQCAVQVFRPDGSLVRTVRHPRGGEMTHPWYVTVDGEGNILVT 72
Query: 115 DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 174
D NH V V+ G F+ +FG +G+ GQL P I ++ ++V+D N R+QIF +
Sbjct: 73 DLINHCVYVYDEFGKFLFQFGGLGSGEGQLNEPRGICTDSSGHILVADYGNKRIQIFTCH 132
Query: 175 GRV 177
G +
Sbjct: 133 GEM 135
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G GS G P GI +I++ADS N R+Q+ H +
Sbjct: 1011 YDESGKFLFQFGGYGSGEGQLASPHGICTDSSGNIIMADSWNERIQIFTRHGEFVR--TI 1068
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
+ P G+AVGP+ +VV + + VF
Sbjct: 1069 RTESTPEGLAVGPEGQLVVTSQWKNTITVF 1098
>gi|260824629|ref|XP_002607270.1| hypothetical protein BRAFLDRAFT_88218 [Branchiostoma floridae]
gi|229292616|gb|EEN63280.1| hypothetical protein BRAFLDRAFT_88218 [Branchiostoma floridae]
Length = 660
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 119/239 (49%), Gaps = 19/239 (7%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIA 104
+G +GS G F +P +AV D IVV +S+N R+Q K V L F PR +A
Sbjct: 401 VGQKGSRDGQFNFPTSLAVTTDGDIVVTESNNFRLQFLDKDDSFKKK-VELEFN-PRCVA 458
Query: 105 VGPDNSIVVADSSNHRVQVFQSDGT---FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ ++V H++ V G + G+ N L IAV + R+IV+
Sbjct: 459 TLSNGDLLVT-GDGHKIHVLDKQGRESRVIKVIGAAENDKTTLG----IAVDSLERIIVT 513
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
Q+F V S G + KFG G + QL + V+++N++I+SD +NH
Sbjct: 514 IG----YQVF-----VLSSTGDVILKFGDKGQRQQQLGPYLRLTVNSSNQIIISDWDNHN 564
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
++IFD GR + + GS GS GQL FP V D + I V D N+R+ +F+ DG F+R
Sbjct: 565 LKIFDPTGRYLFTCGSRGSGPGQLFFPYCVITDGEDNIIVADWNNHRVSLFSRDGTFIR 623
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE-HPHYIAVSNT 155
F +P +AV D IVV +S+N R+Q D +F K +LE +P +A +
Sbjct: 411 FNFPTSLAVTTDGDIVVTESNNFRLQFLDKDDSF--------KKKVELEFNPRCVATLSN 462
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
++V+ + H++ + D GR + + G+ N L IAV + R+IV+
Sbjct: 463 GDLLVT-GDGHKIHVLDKQGR----ESRVIKVIGAAENDKTTLG----IAVDSLERIIVT 513
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
++V + G VI FG +G + QL + V+ I + D N+ ++IF P
Sbjct: 514 --IGYQVFVLSSTGDVILKFGDKGQRQQQLGPYLRLTVNSSNQIIISDWDNHNLKIFDPT 571
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G++L G GSG G+ V NI+V D NHR+ +F
Sbjct: 572 GRYLFTCGSRGSGPGQLFFPYCVITDGEDNIIVADWNNHRVSLF 615
>gi|260811696|ref|XP_002600558.1| hypothetical protein BRAFLDRAFT_205445 [Branchiostoma floridae]
gi|229285845|gb|EEN56570.1| hypothetical protein BRAFLDRAFT_205445 [Branchiostoma floridae]
Length = 226
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 23/221 (10%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GIAV P +I+V N V+V+ +G K L P +AV R++
Sbjct: 25 PSGIAVDPAGNIIVVSPENGPVRVYSREGKLTKTL-----KPESLRDPTGVAVLQDGRMV 79
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI-VSDSN 218
V DS + +GR+ + G GQL++P ++AV + + V+D
Sbjct: 80 VVDSEQKFCLLLQPDGRLIRDIG------------KGQLQYPRFLAVDESRDLFFVTDCR 127
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
H+V +FD+ G++ SFG EG EG+L +P G+ D G I V +S R+Q+F PDG +
Sbjct: 128 AHKVFVFDLEGKLKFSFGKEGLIEGELCYPTGITEDPAGNIIVVNSSRGRLQVFEPDGTY 187
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
LR W G + G+A+ +G I V H ++++
Sbjct: 188 LRTVA-WVRG----RFPRGIALTPDGRIAVTCYNGHCVELY 223
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 18/223 (8%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+L+F+ G +G G P GIAV P +I+V N V+V L +
Sbjct: 7 KLKFRFGKQGKGEGELYCPSGIAVDPAGNIIVVSPENGPVRVYSREGKLTKTLKPESLRD 66
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV- 158
P G+AV D +VV DS + Q DG + G GQL++P ++AV + +
Sbjct: 67 PTGVAVLQDGRMVVVDSEQKFCLLLQPDGRLIRDIGK-----GQLQYPRFLAVDESRDLF 121
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
V+D H+V +FD+ G++ S FG G G+L +P I +IV +S+
Sbjct: 122 FVTDCRAHKVFVFDLEGKLKFS-------FGKEGLIEGELCYPTGITEDPAGNIIVVNSS 174
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISV 261
R+Q+F+ +G + + +FPRG+A+ G I+V
Sbjct: 175 RGRLQVFEPDGTYLRTVAWVRG-----RFPRGIALTPDGRIAV 212
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 11/144 (7%)
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF +G +FG G G+L P IAV +IV N V+++ G++ +
Sbjct: 1 VFDLEGKLKFRFGKQGKGEGELYCPSGIAVDPAGNIIVVSPENGPVRVYSREGKLTKTLK 60
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
E L+ P GVAV G + V DS + PDG+ +R G G+ +
Sbjct: 61 PE-----SLRDPTGVAVLQDGRMVVVDSEQKFCLLLQPDGRLIRDI-----GKGQLQYPR 110
Query: 297 GVAVMSNGNI-LVCDRENHRIQVF 319
+AV + ++ V D H++ VF
Sbjct: 111 FLAVDESRDLFFVTDCRAHKVFVF 134
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+L+F G G G +P GI P +I+V +SS R+QV P ++ +
Sbjct: 139 KLKFSFGKEGLIEGELCYPTGITEDPAGNIIVVNSSRGRLQVFEPDGTYLRTVAWVRGRF 198
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQ 125
PRGIA+ PD I V + H V++++
Sbjct: 199 PRGIALTPDGRIAVTCYNGHCVELYR 224
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 53 GCFTWPRGIAVGPDNSIV-VADSSNHRVQVCFPHFDLKTNCVFL---------AFTWPRG 102
G +PR +AV + V D H+V V FDL+ F +P G
Sbjct: 104 GQLQYPRFLAVDESRDLFFVTDCRAHKVFV----FDLEGKLKFSFGKEGLIEGELCYPTG 159
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
I P +I+V +SS R+QVF+ DGT++ + + P IA++ R+ V+
Sbjct: 160 ITEDPAGNIIVVNSSRGRLQVFEPDGTYLRTVAWVRGR-----FPRGIALTPDGRIAVTC 214
Query: 163 SNNHRVQIF 171
N H V+++
Sbjct: 215 YNGHCVELY 223
>gi|405974632|gb|EKC39261.1| Tripartite motif-containing protein 3 [Crassostrea gigas]
Length = 681
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 120/241 (49%), Gaps = 26/241 (10%)
Query: 47 SRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT-------- 98
S G++ WP G+A+ +++V+ D N +++V FD + FT
Sbjct: 418 SEGTDESRDIWPTGMAITKKDNVVIVDRDNKKIKV----FD-SVGKLLKEFTGQNDNKIG 472
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P + V +++I + D V+VF DG + +G +HP I ++ +
Sbjct: 473 IPFDVTVLENDTIALTDYEKENVKVFTQDGNHLLTI------SGFFKHPRGITTNSKGEI 526
Query: 159 IVSDSNNHRVQIFD-VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
+V D R+ + D NG + ++ + GN+ L P+YI ++ + ++V+D+
Sbjct: 527 LVVDCRQQRITVHDPKNGNLIKT----IDGLDKKGNRI--LVDPYYITTTHEDNILVTDT 580
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
+++F++ GR+I +G+ G +E Q+ P G+ VDD GYI V D+ N+RI + PDG+
Sbjct: 581 AAPNIKVFNMEGRLIAEYGTYGVKEQQILQPFGICVDDYGYIFVADNQNHRIHLLNPDGK 640
Query: 278 F 278
Sbjct: 641 L 641
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 23/175 (13%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH----------FDLKTNCVFLAFTWPRG 102
G F PRGI I+V D R+ V P D K N + + P
Sbjct: 510 GFFKHPRGITTNSKGEILVVDCRQQRITVHDPKNGNLIKTIDGLDKKGNRILVD---PYY 566
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
I +++I+V D++ ++VF +G + ++G+ G K Q+ P I V + + V+D
Sbjct: 567 ITTTHEDNILVTDTAAPNIKVFNMEGRLIAEYGTYGVKEQQILQPFGICVDDYGYIFVAD 626
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
+ NHR+ + + +G+ + KF + K+ + HP + +S +VS++
Sbjct: 627 NQNHRIHLLNPDGK--------LNKF--LLTKSNSIWHPMAVNISKKGFFLVSEA 671
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 8/140 (5%)
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSE 238
+S F+ F S G + P +A++ + V++ D +N ++++FD G+++ F
Sbjct: 407 KSTPEFLLSFDSEGTDESRDIWPTGMAITKKDNVVIVDRDNKKIKVFDSVGKLLKEFT-- 464
Query: 239 GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGV 298
G + ++ P V V + I++ D +++FT DG L G FK G+
Sbjct: 465 GQNDNKIGIPFDVTVLENDTIALTDYEKENVKVFTQDGNHLLTIS------GFFKHPRGI 518
Query: 299 AVMSNGNILVCDRENHRIQV 318
S G ILV D RI V
Sbjct: 519 TTNSKGEILVVDCRQQRITV 538
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ SF SEG++E + +P G+A+ + + + D N +I++F G+ L+ F G D +
Sbjct: 413 LLSFDSEGTDESRDIWPTGMAITKKDNVVIVDRDNKKIKVFDSVGKLLKEFT--GQNDNK 470
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
V V+ N I + D E ++VF
Sbjct: 471 IGIPFDVTVLENDTIALTDYEKENVKVF 498
>gi|409911170|ref|YP_006889635.1| NHL repeat domain-containing protein [Geobacter sulfurreducens
KN400]
gi|298504736|gb|ADI83459.1| NHL repeat domain lipoprotein [Geobacter sulfurreducens KN400]
Length = 361
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 109/225 (48%), Gaps = 11/225 (4%)
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
++ T P + N I VAD V VF V G A Q P + +
Sbjct: 76 MSLTKPLDVYADGQNRIYVADPGLRGVVVFNMKERSVSMLGG-PQAANQFNTPVSVTGDS 134
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ VSD+ + +FD F+ F+ KA + R++V
Sbjct: 135 QGNIYVSDAEKGGILVFDR----FEVPRRFID------TKATVTRNTDIAVDEKRQRILV 184
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
D+ HR+ I D+ G ++++FG G E+G+ FP VA++ +G I VGD+ N R+QIF
Sbjct: 185 VDAREHRIAILDMQGGLLSAFGKRGIEDGEFNFPVAVAINRKGEIIVGDAMNARVQIFDQ 244
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
DG+FLR FG G G +F+ ++GVAV S +I V + + H++ +F
Sbjct: 245 DGKFLRKFGRRGDGPADFQIMKGVAVDSEDHIYVTEGKGHKLIIF 289
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 29/280 (10%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--------FTWPRGIAVG 106
T P + N I VAD V V F++K V + F P +
Sbjct: 78 LTKPLDVYADGQNRIYVADPGLRGVVV----FNMKERSVSMLGGPQAANQFNTPVSVTGD 133
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
+I V+D+ + VF F + KA + R++V D+ H
Sbjct: 134 SQGNIYVSDAEKGGILVFDR---FEVPRRFIDTKATVTRNTDIAVDEKRQRILVVDAREH 190
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
R+ I D+ G + + FG G + G+ P +A++ +IV D+ N RVQIFD
Sbjct: 191 RIAILDMQGGLLSA-------FGKRGIEDGEFNFPVAVAINRKGEIIVGDAMNARVQIFD 243
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+G+ + FG G + +GVAVD + +I V + +++ IF +G++L G
Sbjct: 244 QDGKFLRKFGRRGDGPADFQIMKGVAVDSEDHIYVTEGKGHKLIIFGTNGEYLLTVGGLY 303
Query: 287 S-------GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
S G F +GV + I V D+ N R QVF
Sbjct: 304 SAITTGKQAPGGFVIPQGVFIDDKDVIYVVDQLNRRFQVF 343
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 65/180 (36%), Gaps = 42/180 (23%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAV 105
G RG E G F +P +A+ I+V D+ N RVQ
Sbjct: 206 GKRGIEDGEFNFPVAVAINRKGEIIVGDAMNARVQ------------------------- 240
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
+F DG F+ KFG G+ + +AV + + + V++
Sbjct: 241 -----------------IFDQDGKFLRKFGRRGDGPADFQIMKGVAVDSEDHIYVTEGKG 283
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
H++ IF NG + G + G P + + + + + V D N R Q+F
Sbjct: 284 HKLIIFGTNGEYLLTVGGLYSAITTGKQAPGGFVIPQGVFIDDKDVIYVVDQLNRRFQVF 343
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLKTNCVFLA----- 96
K G RG P F +G+AV ++ I V + H++ + + L ++ A
Sbjct: 251 KFGRRGDGPADFQIMKGVAVDSEDHIYVTEGKGHKLIIFGTNGEYLLTVGGLYSAITTGK 310
Query: 97 -----FTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
F P+G+ + + I V D N R QVFQ
Sbjct: 311 QAPGGFVIPQGVFIDDKDVIYVVDQLNRRFQVFQ 344
>gi|291223217|ref|XP_002731607.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 730
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 123/252 (48%), Gaps = 30/252 (11%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV----FLAFT 98
F IGS+ S P P GI + +++V+AD+ N+R+Q D K NC+ F F
Sbjct: 463 FCIGSKFSAPLYLKSPCGITINHQDNLVIADTDNNRIQT----IDWKGNCLSWKTFKTFP 518
Query: 99 ---WPRGIAVGPDNSIVVADSSNHRVQVFQ--SDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
P ++V V D+ N ++ F +D T G+ + P + +S
Sbjct: 519 KPFQPIDVSVSKAGRHFVTDTGNKQIVAFDDTNDMTIFGQNEGID--------PCSVQLS 570
Query: 154 NTNRVIVS--DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
N V+++ H + +D DG + + G K GQ ++P+ I V++ N+
Sbjct: 571 NDGCVLITGIQKGKHIISKYD-------EDGKHIIDTRNKGTKIGQFQNPYSITVNSKNQ 623
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++VSD NHR+ + D N + ++ FGS G+ +G+ +P G+ VD I + D N RI
Sbjct: 624 ILVSDLGNHRILLLDANFKYLSCFGSRGTGDGEFNYPHGIDVDGNDNIYICDPNNRRICK 683
Query: 272 FTPDGQFLRAFG 283
++PDG+FL G
Sbjct: 684 YSPDGRFLCHIG 695
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 19/225 (8%)
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVG-KFGSMGNKAGQLEHPHYIAVS 153
L P GI + +++V+AD+ N+R+Q G + K K Q P ++VS
Sbjct: 473 LYLKSPCGITINHQDNLVIADTDNNRIQTIDWKGNCLSWKTFKTFPKPFQ---PIDVSVS 529
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
R V+D+ N ++ FD +D T G+ + P + +SN V+
Sbjct: 530 KAGRHFVTDTGNKQIVAFDDT-----NDMTIFGQNEGID--------PCSVQLSNDGCVL 576
Query: 214 VS--DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++ H + +D +G+ I ++G++ GQ + P + V+ + I V D GN+RI +
Sbjct: 577 ITGIQKGKHIISKYDEDGKHIIDTRNKGTKIGQFQNPYSITVNSKNQILVSDLGNHRILL 636
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+ ++L FG G+GDGEF G+ V N NI +CD N RI
Sbjct: 637 LDANFKYLSCFGSRGTGDGEFNYPHGIDVDGNDNIYICDPNNRRI 681
>gi|260785766|ref|XP_002587931.1| hypothetical protein BRAFLDRAFT_87319 [Branchiostoma floridae]
gi|229273086|gb|EEN43942.1| hypothetical protein BRAFLDRAFT_87319 [Branchiostoma floridae]
Length = 815
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 119/250 (47%), Gaps = 37/250 (14%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTW 99
G +GS+PG F P GI V P N I VAD SN RVQV HF
Sbjct: 558 GGKGSKPGKFLTPYGIVVSPSNEIFVADYSNRRVQVHSTKGVYLRHFRTVAPGTEDKDME 617
Query: 100 PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY---IAVS 153
P + + + ++ V ++++H VQ + +DGT + F LE+ Y IAV
Sbjct: 618 PFDVCMDGNGTLWVVGRGETADHVVQ-YSTDGTVMAGF--------DLENSSYYRXIAVD 668
Query: 154 -NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
TN ++V+D+ V VF+ DG+ V G P I V +
Sbjct: 669 MRTNHILVTDAAQGAVH-------VFRPDGSLVRTVG--------YPLPRCITVDGEGNI 713
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+VSD ++H V ++D +G+ + FG G EGQL P G+ D G I V D GN R+QIF
Sbjct: 714 LVSDWDSHCVYVYDESGKFLFQFGGWGRGEGQLSDPHGICTDSSGNILVADYGNERVQIF 773
Query: 273 TPDGQFLRAF 282
T G+F+R F
Sbjct: 774 TRHGEFVRTF 783
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 113/232 (48%), Gaps = 34/232 (14%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM--GNKAGQLEHPHYIAVSN 154
F P GI V P N I VAD SN RVQV + G ++ F ++ G + +E P + +
Sbjct: 567 FLTPYGIVVSPSNEIFVADYSNRRVQVHSTKGVYLRHFRTVAPGTEDKDME-PFDVCMDG 625
Query: 155 TNRVIV---SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY---IAVS- 207
+ V ++ +H VQ + +DGT + F LE+ Y IAV
Sbjct: 626 NGTLWVVGRGETADHVVQ--------YSTDGTVMAGF--------DLENSSYYRXIAVDM 669
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
TN ++V+D+ V +F +G ++ + G PR + VD +G I V D ++
Sbjct: 670 RTNHILVTDAAQGAVHVFRPDGSLVRTVG--------YPLPRCITVDGEGNILVSDWDSH 721
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ ++ G+FL FG WG G+G+ G+ S+GNILV D N R+Q+F
Sbjct: 722 CVYVYDESGKFLFQFGGWGRGEGQLSDPHGICTDSSGNILVADYGNERVQIF 773
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ +FG +GS+ G+ P G+ V I V D N R+Q+ + G +LR F G E
Sbjct: 554 VITFGGKGSKPGKFLTPYGIVVSPSNEIFVADYSNRRVQVHSTKGVYLRHFRTVAPG-TE 612
Query: 292 FKGLEGVAVMSNGN 305
K +E V +GN
Sbjct: 613 DKDMEPFDVCMDGN 626
>gi|225175244|ref|ZP_03729240.1| NHL repeat containing protein [Dethiobacter alkaliphilus AHT 1]
gi|225169420|gb|EEG78218.1| NHL repeat containing protein [Dethiobacter alkaliphilus AHT 1]
Length = 328
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 109/210 (51%), Gaps = 17/210 (8%)
Query: 111 IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
I V+D+ N +++VF +G V FG G + GQL P+ IA ++ +++V+D +
Sbjct: 87 IYVSDTGNSKIRVFDYNGNHVNSFGERGTEPGQLRFPYGIAENSQGQILVAD-------M 139
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
++ N VF DGTF+ FG+ + LE P +A+ + RV V+D H+V +FD G
Sbjct: 140 YNGNISVFTPDGTFLHYFGA----SVDLESPAGLAIID-GRVYVTDVAQHKVIVFDEEGE 194
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
I FG EG E GQ P + V Y++V D+GN+RIQIF G F+ DG
Sbjct: 195 KIFEFGEEGDEPGQFLSPNAITVSGT-YVAVSDTGNHRIQIFNRMGNFIDEI---THADG 250
Query: 291 E-FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F GV S G +L + H+ +F
Sbjct: 251 RNFVNPRGVGYTSRGELLTVNNMTHQTYIF 280
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 113/242 (46%), Gaps = 40/242 (16%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF-------T 98
G RG+EPG +P GIA I+VAD N + V P + FL +
Sbjct: 111 GERGTEPGQLRFPYGIAENSQGQILVADMYNGNISVFTP------DGTFLHYFGASVDLE 164
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P G+A+ D + V D + H+V VF +G + +FG G++ GQ P+ I VS T V
Sbjct: 165 SPAGLAI-IDGRVYVTDVAQHKVIVFDEEGEKIFEFGEEGDEPGQFLSPNAITVSGT-YV 222
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH--------PHYIAVSNTN 210
VSD+ NHR+QIF+ MGN ++ H P + ++
Sbjct: 223 AVSDTGNHRIQIFN-----------------RMGNFIDEITHADGRNFVNPRGVGYTSRG 265
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
++ ++ H+ IF+ NG G +G G+ P G+ +DDQG I + D+ N R+
Sbjct: 266 ELLTVNNMTHQTYIFNPNGEFQHILGQQGQGPGENFLPNGLYIDDQGRIYITDTSNRRVN 325
Query: 271 IF 272
++
Sbjct: 326 VY 327
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 124/260 (47%), Gaps = 28/260 (10%)
Query: 69 IVVADSSNHRVQVCFPHFDLKTNCVFL---------AFTWPRGIAVGPDNSIVVADSSNH 119
I V+D+ N +++V FD N V +P GIA I+VAD N
Sbjct: 87 IYVSDTGNSKIRV----FDYNGNHVNSFGERGTEPGQLRFPYGIAENSQGQILVADMYNG 142
Query: 120 RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ 179
+ VF DGTF+ FG+ + LE P +A+ + RV V+D H+V +FD
Sbjct: 143 NISVFTPDGTFLHYFGA----SVDLESPAGLAIID-GRVYVTDVAQHKVIVFD------- 190
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
+G + +FG G++ GQ P+ I VS T V VSD+ NHR+QIF+ G I
Sbjct: 191 EEGEKIFEFGEEGDEPGQFLSPNAITVSGT-YVAVSDTGNHRIQIFNRMGNFIDEITH-- 247
Query: 240 SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVA 299
++ PRGV +G + ++ ++ IF P+G+F G G G GE G+
Sbjct: 248 ADGRNFVNPRGVGYTSRGELLTVNNMTHQTYIFNPNGEFQHILGQQGQGPGENFLPNGLY 307
Query: 300 VMSNGNILVCDRENHRIQVF 319
+ G I + D N R+ V+
Sbjct: 308 IDDQGRIYITDTSNRRVNVY 327
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 5/109 (4%)
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
++ VSD+ N ++++FD NG + SFG G+E GQL+FP G+A + QG I V D N I
Sbjct: 86 QIYVSDTGNSKIRVFDYNGNHVNSFGERGTEPGQLRFPYGIAENSQGQILVADMYNGNIS 145
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+FTPDG FL FG + + G+A++ +G + V D H++ VF
Sbjct: 146 VFTPDGTFLHYFGA----SVDLESPAGLAII-DGRVYVTDVAQHKVIVF 189
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 13/163 (7%)
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++ VSD+ N ++++FD N G V FG G + GQL P+ IA ++ +++V+D
Sbjct: 86 QIYVSDTGNSKIRVFDYN-------GNHVNSFGERGTEPGQLRFPYGIAENSQGQILVAD 138
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
N + +F +G + FG+ L+ P G+A+ D G + V D +++ +F +G
Sbjct: 139 MYNGNISVFTPDGTFLHYFGASVD----LESPAGLAIID-GRVYVTDVAQHKVIVFDEEG 193
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ + FG G G+F + V S + V D NHRIQ+F
Sbjct: 194 EKIFEFGEEGDEPGQFLSPNAITV-SGTYVAVSDTGNHRIQIF 235
>gi|309790072|ref|ZP_07684646.1| NHL repeat-containing protein [Oscillochloris trichoides DG-6]
gi|308227927|gb|EFO81581.1| NHL repeat-containing protein [Oscillochloris trichoides DG6]
Length = 1124
Score = 108 bits (269), Expect = 4e-21, Method: Composition-based stats.
Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
T P G AV ++ VADS H++ +F DG + FGS GN+ G L P IA+
Sbjct: 829 TGPTGAAVDAQGNLYVADSGAHQIHIFGPDGNLIRSFGSFGNELGYLYEPRGIAIDAEGN 888
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAG--------------QLEHPHY 203
+ V+D+ N R+ ++ +V S G+ G G KA L P
Sbjct: 889 IYVADTWNARIVKYNAQLQVIASWGSGAQDLGD-GRKATITDGDPVKNAENPLGLFGPRG 947
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
+A+ + ++D+ N R+ + D G +G G E G P GVAVD QG + V D
Sbjct: 948 LALDAEGNLYIADTGNKRIVVTDTEGNYRYQWGYAGGEPGAFNEPVGVAVDAQGNVYVAD 1007
Query: 264 SGNNRIQIFTPDG 276
+ N+R+Q+F PDG
Sbjct: 1008 TWNSRVQVFAPDG 1020
Score = 96.7 bits (239), Expect = 1e-17, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 90/193 (46%), Gaps = 27/193 (13%)
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
P AV + V+DS H++ IF DG + FGS GN+ G L P IA+
Sbjct: 831 PTGAAVDAQGNLYVADSGAHQIHIFG-------PDGNLIRSFGSFGNELGYLYEPRGIAI 883
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQ--------------------LK 246
+ V+D+ N R+ ++ +VI S+GS + G L
Sbjct: 884 DAEGNIYVADTWNARIVKYNAQLQVIASWGSGAQDLGDGRKATITDGDPVKNAENPLGLF 943
Query: 247 FPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNI 306
PRG+A+D +G + + D+GN RI + +G + +G G G F GVAV + GN+
Sbjct: 944 GPRGLALDAEGNLYIADTGNKRIVVTDTEGNYRYQWGYAGGEPGAFNEPVGVAVDAQGNV 1003
Query: 307 LVCDRENHRIQVF 319
V D N R+QVF
Sbjct: 1004 YVADTWNSRVQVF 1016
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 83/331 (25%), Positives = 136/331 (41%), Gaps = 45/331 (13%)
Query: 20 LVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRV 79
L G+G TT + L+ + + P T P G AV ++ VADS H++
Sbjct: 799 LAGGVGANETTTSAD------LRLLAQAEATLPVGGTGPTGAAVDAQGNLYVADSGAHQI 852
Query: 80 QVCFPHFDL-KTNCVF---LAFTW-PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKF 134
+ P +L ++ F L + + PRGIA+ + +I VAD+ N R+ + + + +
Sbjct: 853 HIFGPDGNLIRSFGSFGNELGYLYEPRGIAIDAEGNIYVADTWNARIVKYNAQLQVIASW 912
Query: 135 GSMGNKAGQ--------------------LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 174
GS G L P +A+ + ++D+ N R+ + D
Sbjct: 913 GSGAQDLGDGRKATITDGDPVKNAENPLGLFGPRGLALDAEGNLYIADTGNKRIVVTD-- 970
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF--DVNGRV- 231
++G + ++G G + G P +AV V V+D+ N RVQ+F D G+V
Sbjct: 971 -----TEGNYRYQWGYAGGEPGAFNEPVGVAVDAQGNVYVADTWNSRVQVFAPDGTGQVS 1025
Query: 232 ---ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
I ++ G + P +A G + V +I G L +G GSG
Sbjct: 1026 PIPIITWPVSGWQPNTYDDP-AIAASPDGKVYVSIPSRQQILAANLRGDVLLRWGGPGSG 1084
Query: 289 DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GVAV +G++ V DR R F
Sbjct: 1085 RAALNSPSGVAVSPDGSVWVVDRNESRALRF 1115
Score = 83.2 bits (204), Expect = 2e-13, Method: Composition-based stats.
Identities = 70/258 (27%), Positives = 113/258 (43%), Gaps = 28/258 (10%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRV------------------------QV 81
GS G+E G PRGIA+ + +I VAD+ N R+ +
Sbjct: 866 GSFGNELGYLYEPRGIAIDAEGNIYVADTWNARIVKYNAQLQVIASWGSGAQDLGDGRKA 925
Query: 82 CFPHFDLKTNCVF-LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNK 140
D N L PRG+A+ + ++ +AD+ N R+ V ++G + ++G G +
Sbjct: 926 TITDGDPVKNAENPLGLFGPRGLALDAEGNLYIADTGNKRIVVTDTEGNYRYQWGYAGGE 985
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
G P +AV V V+D+ N RVQ+F +G Q + + G + +
Sbjct: 986 PGAFNEPVGVAVDAQGNVYVADTWNSRVQVFAPDG-TGQVSPIPIITWPVSGWQPNTYDD 1044
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
P IA S +V VS + ++ ++ G V+ +G GS L P GVAV G +
Sbjct: 1045 PA-IAASPDGKVYVSIPSRQQILAANLRGDVLLRWGGPGSGRAALNSPSGVAVSPDGSVW 1103
Query: 261 VGDSGNNR-IQIFTPDGQ 277
V D +R ++ P+ Q
Sbjct: 1104 VVDRNESRALRFILPEVQ 1121
>gi|260792738|ref|XP_002591371.1| hypothetical protein BRAFLDRAFT_227329 [Branchiostoma floridae]
gi|229276576|gb|EEN47382.1| hypothetical protein BRAFLDRAFT_227329 [Branchiostoma floridae]
Length = 653
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 122/269 (45%), Gaps = 31/269 (11%)
Query: 25 GQVGTTPRSQYLQKRRLQ-FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF 83
G V +P +Q R IG GSE G + P +AV D +I V D+ RVQ+
Sbjct: 402 GAVAGSPFDVKVQSRDTPVLTIGREGSEEGKLSCPSDVAVDMDGNIAVVDNGKKRVQI-- 459
Query: 84 PHFDLKTNCVFLAF----TWPRGIAVGPDNSIVVA----DSSNHRVQVFQSDGTFVGKFG 135
FD KT +F P GI + + V+ + N ++V+ +G
Sbjct: 460 --FDAKTGQSLRSFPVDGESPWGIDMDSNGQFVLTFGNYPTGNQAIRVYSREGKLTKTL- 516
Query: 136 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA 195
K L P +AV R++V D + Q DG+ + G
Sbjct: 517 ----KPDCLRDPFGVAVLQGGRMVVVDWGQQSCLLL-------QPDGSLIRDIGK----- 560
Query: 196 GQLEHPHYIAVSNTNRVI-VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
GQL+ P +IAV + + V+D + HRV +FD+ G++ FG +G EG+L P G+ VD
Sbjct: 561 GQLQDPWFIAVDESRDLFFVTDFSAHRVFVFDLEGKLKFIFGEQGWNEGELYNPTGITVD 620
Query: 255 DQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
G I V + GN R+Q+F PDG +LR
Sbjct: 621 PAGNIVVVNCGNGRLQVFGPDGTYLRTVA 649
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 105/254 (41%), Gaps = 55/254 (21%)
Query: 116 SSNHRVQV---------------FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
+ NHR++V QS T V G G++ G+L P +AV + V
Sbjct: 390 TGNHRLEVKVNGGAVAGSPFDVKVQSRDTPVLTIGREGSEEGKLSCPSDVAVDMDGNIAV 449
Query: 161 SDSNNHRVQIFDVN----------------GRVFQSDGTFVGKFGS--MGNKAGQ----- 197
D+ RVQIFD G S+G FV FG+ GN+A +
Sbjct: 450 VDNGKKRVQIFDAKTGQSLRSFPVDGESPWGIDMDSNGQFVLTFGNYPTGNQAIRVYSRE 509
Query: 198 -----------LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
L P +AV R++V D + +G +I G +GQL+
Sbjct: 510 GKLTKTLKPDCLRDPFGVAVLQGGRMVVVDWGQQSCLLLQPDGSLIRDIG-----KGQLQ 564
Query: 247 FPRGVAVDD-QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
P +AVD+ + V D +R+ +F +G+ FG G +GE G+ V GN
Sbjct: 565 DPWFIAVDESRDLFFVTDFSAHRVFVFDLEGKLKFIFGEQGWNEGELYNPTGITVDPAGN 624
Query: 306 ILVCDRENHRIQVF 319
I+V + N R+QVF
Sbjct: 625 IVVVNCGNGRLQVF 638
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 1/138 (0%)
Query: 47 SRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVG 106
++ +P C P G+AV +VV D + P L + P IAV
Sbjct: 513 TKTLKPDCLRDPFGVAVLQGGRMVVVDWGQQSCLLLQPDGSLIRDIGKGQLQDPWFIAVD 572
Query: 107 PDNSIV-VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
+ V D S HRV VF +G FG G G+L +P I V ++V + N
Sbjct: 573 ESRDLFFVTDFSAHRVFVFDLEGKLKFIFGEQGWNEGELYNPTGITVDPAGNIVVVNCGN 632
Query: 166 HRVQIFDVNGRVFQSDGT 183
R+Q+F +G ++ T
Sbjct: 633 GRLQVFGPDGTYLRTVAT 650
>gi|193784121|dbj|BAG53665.1| unnamed protein product [Homo sapiens]
Length = 169
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 90/173 (52%), Gaps = 10/173 (5%)
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
P +AV +IV D N +F FQ +G VG+FG G PH++AV
Sbjct: 3 PKGVAVDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAV 55
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
+N N ++V+D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN
Sbjct: 56 NNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 115
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+RIQ+F G FL G +G+A+ S+G+++V D NH + +
Sbjct: 116 SRIQVFDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCFKAY 165
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDL-----KTNCVFLAFTWPRGIAVGPDNSIV 112
P+G+AV + I+V D+ + V P+ L F P +AV N IV
Sbjct: 3 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 62
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 172
V D NH V+V+ +DG F+ KFGS G GQ P +AV + +IV+D N R+Q+FD
Sbjct: 63 VTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFD 122
Query: 173 VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
S G+F+ + A L P +A+++ V+V+D+ NH + +
Sbjct: 123 -------SSGSFLSY---INTSAEPLYGPQGLALTSDGHVVVADAGNHCFKAY 165
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---- 95
+L + G RG+ F P +AV N IVV D NH V+V + FL
Sbjct: 32 KLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKV------YSADGEFLFKFG 85
Query: 96 -------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
F P G+AV + +I+VAD N R+QVF S G+F+ + A L P
Sbjct: 86 SHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSY---INTSAEPLYGPQ 142
Query: 149 YIAVSNTNRVIVSDSNNHRVQIF 171
+A+++ V+V+D+ NH + +
Sbjct: 143 GLALTSDGHVVVADAGNHCFKAY 165
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 14/99 (14%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y FK GS G G F P G+AV + +I+VAD N R+QV FD ++ F
Sbjct: 74 YSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--SSGSF 127
Query: 95 LAFT--------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
L++ P+G+A+ D +VVAD+ NH + ++
Sbjct: 128 LSYINTSAEPLYGPQGLALTSDGHVVVADAGNHCFKAYR 166
>gi|345860132|ref|ZP_08812458.1| NHL repeat family protein [Desulfosporosinus sp. OT]
gi|344326773|gb|EGW38225.1| NHL repeat family protein [Desulfosporosinus sp. OT]
Length = 318
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 109/226 (48%), Gaps = 11/226 (4%)
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
A P +AV D I V D++N RVQVF GT KFG G G+ + P+ IA
Sbjct: 51 ALNKPMDVAV-IDQFIYVTDTNNKRVQVFDLGGTPFFKFGKEGTGKGEFKFPYGIAGDKQ 109
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+V VSD N + +FD S G F+ F G +E P + + +++ V+
Sbjct: 110 GQVYVSDLYNGCISVFD-------SKGKFIKYFAEKGPNEKIIEAPGSLRIFG-DKLYVT 161
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +V +FD+ G+++ G G + GQ + P + VD G + V D+GN R+Q+F D
Sbjct: 162 DIKKSKVLVFDLEGKLLKEIGGLGQKAGQFQAPNALTVDKDGNLYVVDTGNQRVQVFDKD 221
Query: 276 GQFLRAF--GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+++RA G GD F G+ + S G + V H + F
Sbjct: 222 YKYVRAINGSANGVGDSIFVNPRGIGIDSRGILYVVSNLTHFVYGF 267
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------AFTWPRGIAVGPD 108
P +AV D I V D++N RVQV FDL F F +P GIA
Sbjct: 55 PMDVAV-IDQFIYVTDTNNKRVQV----FDLGGTPFFKFGKEGTGKGEFKFPYGIAGDKQ 109
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
+ V+D N + VF S G F+ F G +E P + + +++ V+D +V
Sbjct: 110 GQVYVSDLYNGCISVFDSKGKFIKYFAEKGPNEKIIEAPGSLRIFG-DKLYVTDIKKSKV 168
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
+FD+ G++ + + G +G KAGQ + P+ + V + V D+ N RVQ+FD +
Sbjct: 169 LVFDLEGKLLK-------EIGGLGQKAGQFQAPNALTVDKDGNLYVVDTGNQRVQVFDKD 221
Query: 229 GRVITSFGSEGSEEGQLKF--PRGVAVDDQGYISVGDSGNNRI---QIFTPDGQFLRAFG 283
+ + + + G F PRG+ +D +G + V + + + I + L FG
Sbjct: 222 YKYVRAINGSANGVGDSIFVNPRGIGIDSRGILYVVSNLTHFVYGFDISDKSDKKLFTFG 281
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G + +F G+ V N N+ + D N R+ V+
Sbjct: 282 GNGESNTQFSLPNGLFVDENDNVYITDSSNQRVAVY 317
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 103/243 (42%), Gaps = 24/243 (9%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV-FLAFTWP- 100
FK G G+ G F +P GIA + V+D N C FD K + + A P
Sbjct: 86 FKFGKEGTGKGEFKFPYGIAGDKQGQVYVSDLYNG----CISVFDSKGKFIKYFAEKGPN 141
Query: 101 RGIAVGPD------NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
I P + + V D +V VF +G + + G +G KAGQ + P+ + V
Sbjct: 142 EKIIEAPGSLRIFGDKLYVTDIKKSKVLVFDLEGKLLKEIGGLGQKAGQFQAPNALTVDK 201
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ--LEHPHYIAVSNTNRV 212
+ V D+ N RVQ+FD D +V N G +P I + + +
Sbjct: 202 DGNLYVVDTGNQRVQVFD-------KDYKYVRAINGSANGVGDSIFVNPRGIGIDSRGIL 254
Query: 213 IVSDSNNHRVQIFDVNGRV---ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
V + H V FD++ + + +FG G Q P G+ VD+ + + DS N R+
Sbjct: 255 YVVSNLTHFVYGFDISDKSDKKLFTFGGNGESNTQFSLPNGLFVDENDNVYITDSSNQRV 314
Query: 270 QIF 272
++
Sbjct: 315 AVY 317
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 76/178 (42%), Gaps = 49/178 (27%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
+G G+ A L P +AV + + V+D+NN RVQ+FD+ G FG EG+ +G+ KF
Sbjct: 44 YGGFGDDA--LNKPMDVAVID-QFIYVTDTNNKRVQVFDLGGTPFFKFGKEGTGKGEFKF 100
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF------------------------- 282
P G+A D QG + V D N I +F G+F++ F
Sbjct: 101 PYGIAGDKQGQVYVSDLYNGCISVFDSKGKFIKYFAEKGPNEKIIEAPGSLRIFGDKLYV 160
Query: 283 ---------------------GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G G+F+ + V +GN+ V D N R+QVF
Sbjct: 161 TDIKKSKVLVFDLEGKLLKEIGGLGQKAGQFQAPNALTVDKDGNLYVVDTGNQRVQVF 218
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 61/147 (41%), Gaps = 20/147 (13%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---- 95
+L +IG G + G F P + V D ++ V D+ N RVQV FD V
Sbjct: 176 KLLKEIGGLGQKAGQFQAPNALTVDKDGNLYVVDTGNQRVQV----FDKDYKYVRAINGS 231
Query: 96 -------AFTWPRGIAVGPDNSIVVADSSNHRVQVF----QSDGTFVGKFGSMGNKAGQL 144
F PRGI + + V + H V F +SD FG G Q
Sbjct: 232 ANGVGDSIFVNPRGIGIDSRGILYVVSNLTHFVYGFDISDKSDKKLF-TFGGNGESNTQF 290
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIF 171
P+ + V + V ++DS+N RV ++
Sbjct: 291 SLPNGLFVDENDNVYITDSSNQRVAVY 317
>gi|340380313|ref|XP_003388667.1| PREDICTED: hypothetical protein LOC100640930 [Amphimedon
queenslandica]
Length = 651
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 37/207 (17%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVA 114
F+ PRG+A+ PD I+V+D NHR+Q + +A
Sbjct: 273 FSHPRGVAITPDKFILVSD--NHRIQKI--------------------------RQVYIA 304
Query: 115 DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 174
D N +QV D TF FGS G+ G+ +P +IA+ + V V+D+ NHR+Q
Sbjct: 305 DKGNDCIQVLNPDLTFSHSFGSYGSANGEFVYPRHIAIDSQGLVYVTDNGNHRIQ----- 359
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN--TNRVIVSDSNNHRVQIFDVNGRVI 232
F DG FV +FG+ G+ GQL +P+ I + T V VS+ N+R+ +F +G +
Sbjct: 360 --KFSPDGKFVCQFGTKGSGPGQLSNPNGITIDTAATGLVYVSEWGNNRISVFTSDGVFV 417
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYI 259
+ FGS+GS Q P G+ D+ G +
Sbjct: 418 SKFGSKGSNIDQFNNPYGLTFDEDGLL 444
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 102/210 (48%), Gaps = 42/210 (20%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F+ PRG+A+ PD I+V+D NHR+Q +
Sbjct: 273 FSHPRGVAITPDKFILVSD--NHRIQKIR------------------------------- 299
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+V ++D N +Q V D TF FGS G+ G+ +P +IA+ + V V+D
Sbjct: 300 QVYIADKGNDCIQ-------VLNPDLTFSHSFGSYGSANGEFVYPRHIAIDSQGLVYVTD 352
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD--QGYISVGDSGNNRIQIFTP 274
+ NHR+Q F +G+ + FG++GS GQL P G+ +D G + V + GNNRI +FT
Sbjct: 353 NGNHRIQKFSPDGKFVCQFGTKGSGPGQLSNPNGITIDTAATGLVYVSEWGNNRISVFTS 412
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNG 304
DG F+ FG GS +F G+ +G
Sbjct: 413 DGVFVSKFGSKGSNIDQFNNPYGLTFDEDG 442
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 203 YIAVSNTNR------VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ 256
+I VS+ +R V ++D N +Q+ + + SFGS GS G+ +PR +A+D Q
Sbjct: 286 FILVSDNHRIQKIRQVYIADKGNDCIQVLNPDLTFSHSFGSYGSANGEFVYPRHIAIDSQ 345
Query: 257 GYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV--MSNGNILVCDRENH 314
G + V D+GN+RIQ F+PDG+F+ FG GSG G+ G+ + + G + V + N+
Sbjct: 346 GLVYVTDNGNHRIQKFSPDGKFVCQFGTKGSGPGQLSNPNGITIDTAATGLVYVSEWGNN 405
Query: 315 RIQVF 319
RI VF
Sbjct: 406 RISVF 410
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------FT 98
GS GS G F +PR IA+ + V D+ NHR+Q P D K C F +
Sbjct: 325 GSYGSANGEFVYPRHIAIDSQGLVYVTDNGNHRIQKFSP--DGKFVCQFGTKGSGPGQLS 382
Query: 99 WPRGIAVGPDNS--IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
P GI + + + V++ N+R+ VF SDG FV KFGS G+ Q +P+
Sbjct: 383 NPNGITIDTAATGLVYVSEWGNNRISVFTSDGVFVSKFGSKGSNIDQFNNPY 434
>gi|225850986|ref|YP_002731220.1| NHL repeat domain protein [Persephonella marina EX-H1]
gi|225645738|gb|ACO03924.1| NHL repeat domain protein [Persephonella marina EX-H1]
Length = 335
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 144/310 (46%), Gaps = 30/310 (9%)
Query: 21 VSGIGQVGTTPRSQYLQKRRLQFKIGSRGSE--PGCFTWPRGI-AVGPDNSIVVADSSNH 77
+ +GQ+ R + L F G + P P G+ AVG +++ D+++
Sbjct: 38 IKYLGQIPDISRES--ESNFLDFLFGEKKELELPDYLGKPYGVVAVG--STVFFTDTAHA 93
Query: 78 RVQVCFPHFDLKTNCVF-----LAFTWPRGIAVGPDNSIV-VADSSNHRVQVFQSDGTFV 131
+ ++LKT + + F P GI I+ ++D+ +V F + G V
Sbjct: 94 LIY----SYNLKTKKLKDLHFPIPFELPMGITFSKKKRILYISDAKLQKVFGFNTKGQLV 149
Query: 132 GKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGS 190
G + G+ + P +AV + NR+ V D+ +HR++++D+ DG ++ FG
Sbjct: 150 VAIG----RKGEFKKPVGLAVDDDLNRLYVVDTFDHRIKVYDL-------DGNYLFGFGR 198
Query: 191 MGNKAGQLEHPHYIAV-SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
G+ G+ +P I V N + + ++D+ R+Q+F + I + G G G+ P+
Sbjct: 199 RGDGPGEFNYPTNIFVNKNNSNIYITDTQLFRIQVFTKDFEHILTIGGIGDLPGRFARPK 258
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
G+AVD G I V D+ N QIF+ +G L G G G EF G+ + I V
Sbjct: 259 GIAVDSDGNIYVVDAAFNNFQIFSSEGDLLYYIGGPGFGPAEFLLPAGIYIDEKDRIFVV 318
Query: 310 DRENHRIQVF 319
D N RIQ+F
Sbjct: 319 DSLNKRIQIF 328
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------- 96
IG G PG F P+GIAV D +I V D++ + Q+ DL ++
Sbjct: 244 IGGIGDLPGRFARPKGIAVDSDGNIYVVDAAFNNFQIFSSEGDL---LYYIGGPGFGPAE 300
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
F P GI + + I V DS N R+Q+F+
Sbjct: 301 FLLPAGIYIDEKDRIFVVDSLNKRIQIFK 329
>gi|406830431|ref|ZP_11090025.1| NHL repeat containing protein [Schlesneria paludicola DSM 18645]
Length = 334
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 14/285 (4%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVAD--SSNHRVQVCFPHFDLKTNCV--FLAFTWPR 101
G+ G G F P IAV + I+V D SN + FD + + F P
Sbjct: 47 GTNGHGEGEFNIPIAIAVNKSDEILVTDFRQSNAEAKSRVQRFDQEGRFLDAFETDPMPG 106
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
G+A+ D + V H+V V+ +G V +FG G+ G+ + P IA+ V V+
Sbjct: 107 GLALDKDGLLYVTHMMKHKVAVYDPEGKLVREFGKQGSAPGEFDQPGGIAIGRDGIVYVA 166
Query: 162 DSNNHRVQIFDVNGR---VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
D N RVQ G + G G+FG + G+ PH++A ++ + ++++
Sbjct: 167 DQANQRVQQLSPQGSPLGAWGKHGMATGEFGGNSSPRGRGGGPHFLAFNSDGDLYTTEAS 226
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQ------LKFPRGVAVDDQGYISVGDSGNNRIQIF 272
RVQ F +G + ++G G + P VA+D + V S N+ +Q F
Sbjct: 227 VGRVQKFHPDGTFVLAWGDNEVGPGHFGGHSYMPGPLAVAIDHNDRVWV-SSTNHHVQQF 285
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
T DG F+R G G G+F+ G+A S + V D N RIQ
Sbjct: 286 TADGHFIRRVGGEGKEPGQFRLPHGLAFDSQHFLYVADARNSRIQ 330
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 99/216 (45%), Gaps = 33/216 (15%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL------ 88
Y + +L + G +GS PG F P GIA+G D + VAD +N RVQ P
Sbjct: 129 YDPEGKLVREFGKQGSAPGEFDQPGGIAIGRDGIVYVADQANQRVQQLSPQGSPLGAWGK 188
Query: 89 --KTNCVFLAFTWPRGIAVGP-------DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGN 139
F + PRG GP D + ++S RVQ F DGTFV +G N
Sbjct: 189 HGMATGEFGGNSSPRGRGGGPHFLAFNSDGDLYTTEASVGRVQKFHPDGTFVLAWGD--N 246
Query: 140 KAGQ--------LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM 191
+ G + P +A+ + +RV VS +N+H Q F +DG F+ + G
Sbjct: 247 EVGPGHFGGHSYMPGPLAVAIDHNDRVWVSSTNHHVQQ--------FTADGHFIRRVGGE 298
Query: 192 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 227
G + GQ PH +A + + + V+D+ N R+Q +
Sbjct: 299 GKEPGQFRLPHGLAFDSQHFLYVADARNSRIQKLSI 334
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 36/205 (17%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSD------SNNHRVQIFDVNGR---VFQSDGTF 184
+G+ G+ G+ P IAV+ ++ ++V+D RVQ FD GR F++D
Sbjct: 46 WGTNGHGEGEFNIPIAIAVNKSDEILVTDFRQSNAEAKSRVQRFDQEGRFLDAFETD--- 102
Query: 185 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQ 244
P +A+ + V+ H+V ++D G+++ FG +GS G+
Sbjct: 103 --------------PMPGGLALDKDGLLYVTHMMKHKVAVYDPEGKLVREFGKQGSAPGE 148
Query: 245 LKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG------- 297
P G+A+ G + V D N R+Q +P G L A+G G GEF G
Sbjct: 149 FDQPGGIAIGRDGIVYVADQANQRVQQLSPQGSPLGAWGKHGMATGEFGGNSSPRGRGGG 208
Query: 298 ---VAVMSNGNILVCDRENHRIQVF 319
+A S+G++ + R+Q F
Sbjct: 209 PHFLAFNSDGDLYTTEASVGRVQKF 233
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 103/245 (42%), Gaps = 37/245 (15%)
Query: 97 FTWPRGIAVGPDNSIVVAD------SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
F P IAV + I+V D + RVQ F +G F+ F + G +
Sbjct: 56 FNIPIAIAVNKSDEILVTDFRQSNAEAKSRVQRFDQEGRFLDAFETDPMPGG-------L 108
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
A+ + V+ H+V ++D G++ V +FG G+ G+ + P IA+
Sbjct: 109 ALDKDGLLYVTHMMKHKVAVYDPEGKL-------VREFGKQGSAPGEFDQPGGIAIGRDG 161
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL---KFPRG-------VAVDDQGYIS 260
V V+D N RVQ G + ++G G G+ PRG +A + G +
Sbjct: 162 IVYVADQANQRVQQLSPQGSPLGAWGKHGMATGEFGGNSSPRGRGGGPHFLAFNSDGDLY 221
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE------GVAVMSNGNILVCDRENH 314
++ R+Q F PDG F+ A+G G G F G VA+ N + V NH
Sbjct: 222 TTEASVGRVQKFHPDGTFVLAWGDNEVGPGHFGGHSYMPGPLAVAIDHNDRVWVSS-TNH 280
Query: 315 RIQVF 319
+Q F
Sbjct: 281 HVQQF 285
>gi|260808708|ref|XP_002599149.1| hypothetical protein BRAFLDRAFT_81816 [Branchiostoma floridae]
gi|229284425|gb|EEN55161.1| hypothetical protein BRAFLDRAFT_81816 [Branchiostoma floridae]
Length = 610
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAV 105
G RGS+ F P G+ V I +AD N R+Q F L F A+T +
Sbjct: 333 GERGSQALQFDCPSGVTVSDKGIIFIADFWNQRIQF-FTQQRLNVQ-DFSAYTTSSN-KM 389
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN--RVIVSDS 163
P++ ++ + + V + D F +F NK GQ I + T R + D+
Sbjct: 390 TPESVVMDGEGNPWVVGRMKPDDNFAVQFSI--NKYGQYNALRNINLQRTGWIRGVAIDT 447
Query: 164 NNHRVQIFDVNG---------RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ + I G +VF+ DG V +G + G +++P +I V ++V
Sbjct: 448 KKNNILITQSTGDWPQRNGEVQVFRPDGKLVR---VVGQQQG-MKYPQHITVDEEGSILV 503
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
SD +NH + +F+ +G+ + FG EGS EGQLK PRG+ D G I V DSGN+R+++F
Sbjct: 504 SDYDNHCIYVFNDDGQFLFKFGGEGSVEGQLKHPRGICTDKSGNIIVADSGNSRVEMFDK 563
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+FL+ + + + VA+ + G ++V D H + +F
Sbjct: 564 TGRFLKHI------TTDIEDPKAVAMGTQGQVVVTDVATHTVTIF 602
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW--- 99
FK G GS G PRGI +I+VADS N RV++ FD KT T
Sbjct: 522 FKFGGEGSVEGQLKHPRGICTDKSGNIIVADSGNSRVEM----FD-KTGRFLKHITTDIE 576
Query: 100 -PRGIAVGPDNSIVVADSSNHRVQVF 124
P+ +A+G +VV D + H V +F
Sbjct: 577 DPKAVAMGTQGQVVVTDVATHTVTIF 602
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
++HR Q +G +FG GS+ Q P GV V D+G I + D N RIQ FT
Sbjct: 315 HHHRNQGQGEHGYERVTFGERGSQALQFDCPSGVTVSDKGIIFIADFWNQRIQFFTQQRL 374
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDR 311
++ F + + + E V + GN V R
Sbjct: 375 NVQDFSAYTTSSNKMTP-ESVVMDGEGNPWVVGR 407
>gi|443720303|gb|ELU10101.1| hypothetical protein CAPTEDRAFT_46566, partial [Capitella teleta]
Length = 208
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 96/173 (55%), Gaps = 9/173 (5%)
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR- 157
WPR I V +N I+VADS +++ F+ D K + + + P +AV + +
Sbjct: 41 WPRDITVLQNNIILVADSHTQKIRPFKMDAYTSKKDFADLHARHLFKEPTSVAVCHRKKH 100
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSD 216
++VSD+ N+ + I + NG++ +FG GN + ++P +I+V T+R+IVSD
Sbjct: 101 IVVSDTGNNDITILNTNGQLQH-------RFGCHGNGDVEFDNPEFISVDPFTDRIIVSD 153
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
NNH V+I+D GR + G G + GQL P GV DDQG I V D NNR+
Sbjct: 154 CNNHCVKIYDFEGRFVCRIGEHGQQVGQLSHPGGVVADDQGNIIVADGANNRV 206
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 14/188 (7%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ-VCFPHFDLKTNCVFL----A 96
Q K+ S G WPR I V +N I+VADS +++ + K + L
Sbjct: 26 QGKLTSAFRASGEDLWPRDITVLQNNIILVADSHTQKIRPFKMDAYTSKKDFADLHARHL 85
Query: 97 FTWPRGIAV-GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN- 154
F P +AV IVV+D+ N+ + + ++G +FG GN + ++P +I+V
Sbjct: 86 FKEPTSVAVCHRKKHIVVSDTGNNDITILNTNGQLQHRFGCHGNGDVEFDNPEFISVDPF 145
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
T+R+IVSD NNH V+I+D GR FV + G G + GQL HP + + +IV
Sbjct: 146 TDRIIVSDCNNHCVKIYDFEGR-------FVCRIGEHGQQVGQLSHPGGVVADDQGNIIV 198
Query: 215 SDSNNHRV 222
+D N+RV
Sbjct: 199 ADGANNRV 206
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 13/210 (6%)
Query: 111 IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
+ VA +QV+ G F + G P I V N ++V+DS+ +++
Sbjct: 10 LAVALYGAKNIQVYDDQGKLTSAFRASGEDLW----PRDITVLQNNIILVADSHTQKIRP 65
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR-VIVSDSNNHRVQIFDVNG 229
F ++ + D F + + + P +AV + + ++VSD+ N+ + I + NG
Sbjct: 66 FKMDAYTSKKD------FADLHARH-LFKEPTSVAVCHRKKHIVVSDTGNNDITILNTNG 118
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
++ FG G+ + + P ++VD I V D N+ ++I+ +G+F+ G G
Sbjct: 119 QLQHRFGCHGNGDVEFDNPEFISVDPFTDRIIVSDCNNHCVKIYDFEGRFVCRIGEHGQQ 178
Query: 289 DGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
G+ GV GNI+V D N+R+ V
Sbjct: 179 VGQLSHPGGVVADDQGNIIVADGANNRVCV 208
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL 245
GK S +G+ P I V N ++V+DS+ +++ F ++ ++
Sbjct: 27 GKLTSAFRASGEDLWPRDITVLQNNIILVADSHTQKIRPFKMDAYTSKKDFADLHARHLF 86
Query: 246 KFPRGVAV-DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMS-N 303
K P VAV + +I V D+GNN I I +GQ FGC G+GD EF E ++V
Sbjct: 87 KEPTSVAVCHRKKHIVVSDTGNNDITILNTNGQLQHRFGCHGNGDVEFDNPEFISVDPFT 146
Query: 304 GNILVCDRENHRIQVF 319
I+V D NH ++++
Sbjct: 147 DRIIVSDCNNHCVKIY 162
>gi|326321750|gb|ADZ53875.1| tripartite motif-containing protein 71 [Grampus griseus]
Length = 250
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 111/215 (51%), Gaps = 16/215 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 52 VVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI--- 96
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R+
Sbjct: 97 -ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRI 155
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQF F
Sbjct: 156 QVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDTSRRIVVADKDNHRIQIFTFEGQFHLKF 215
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
G G+ +G+F VA+ S G ILV D NH IQ
Sbjct: 216 GEKGTKNGQFNYPWDVALNSEGKILVSDTRNHPIQ 250
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 79/124 (63%), Gaps = 7/124 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G++V + IVVAD SN+R+QVF+ G F KFG++G++ GQ + P +A + R++
Sbjct: 134 PWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDTSRRIV 193
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+QIF +G F KFG G K GQ +P +A+++ +++VSD+ N
Sbjct: 194 VADKDNHRIQIFTF-------EGQFHLKFGEKGTKNGQFNYPWDVALNSEGKILVSDTRN 246
Query: 220 HRVQ 223
H +Q
Sbjct: 247 HPIQ 250
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 81/148 (54%), Gaps = 17/148 (11%)
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT----- 233
Q +GT+V + QLE H ++V+ N+ I N ++ +GR
Sbjct: 68 QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI----ENSPFKVVVKSGRSYVGIGLP 117
Query: 234 --SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
SFGSEG +G+L P GV+VD +GYI V D NNRIQ+F P G F FG GS G+
Sbjct: 118 GLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQ 177
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F GVA ++ I+V D++NHRIQ+F
Sbjct: 178 FDRPAGVACDTSRRIVVADKDNHRIQIF 205
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 69/132 (52%), Gaps = 5/132 (3%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 119 LSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 178
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F KFG G K GQ +P +A+++ +
Sbjct: 179 DRPAGVACDTSRRIVVADKDNHRIQIFTFEGQFHLKFGEKGTKNGQFNYPWDVALNSEGK 238
Query: 158 VIVSDSNNHRVQ 169
++VSD+ NH +Q
Sbjct: 239 ILVSDTRNHPIQ 250
>gi|94967773|ref|YP_589821.1| NHL repeat-containing protein [Candidatus Koribacter versatilis
Ellin345]
gi|94549823|gb|ABF39747.1| NHL repeat protein [Candidatus Koribacter versatilis Ellin345]
Length = 355
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 22/272 (8%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------AFTWPRGIAVGPD 108
P IAV +V D + V + FDL + + P+ +AV
Sbjct: 83 PYSIAVDSRGRAIVTDPGANGVHI----FDLAQHKYKFVERNEKGKESMLQPQCVAVDAH 138
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDSNNHR 167
++ V DS +V VF +DG + G++ G + P IA+ S RV ++D+ +
Sbjct: 139 DNFYVTDSETGKVFVFNADGKYQRSIGALKGGEGFFKRPTGIAIDSAAQRVYITDTLRDK 198
Query: 168 VQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 227
+ + D+ G+V + G G++ G+L +P + + + ++V D+ N R+QIF
Sbjct: 199 IYVTDMQGQVLAT-------IGKPGSEPGELHYPTELRIVG-DELVVVDAMNFRIQIFGK 250
Query: 228 NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGS 287
+G S G G G + P+GV+VD + +I V + + R+QI+ +G +L FG G+
Sbjct: 251 DGSYRGSIGEIGDTPGAMFRPKGVSVDSENHIYVVEGASARVQIYDREGHWLYWFGGKGT 310
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G EF+ G+ + I V D N RIQV
Sbjct: 311 GPEEFQLPSGIFIDHEDRIFVVDSFNRRIQVL 342
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 14/232 (6%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWPRGIAV-GPDNSI 111
P+ +AV ++ V DS +V V + + L F P GIA+ +
Sbjct: 130 PQCVAVDAHDNFYVTDSETGKVFVFNADGKYQRSIGALKGGEGFFKRPTGIAIDSAAQRV 189
Query: 112 VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
+ D+ ++ V G + G G++ G+L +P + + + ++V D+ N R+QIF
Sbjct: 190 YITDTLRDKIYVTDMQGQVLATIGKPGSEPGELHYPTELRIVG-DELVVVDAMNFRIQIF 248
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
DG++ G G +G+ G + P ++V + N + V + + RVQI+D G
Sbjct: 249 G-------KDGSYRGSIGEIGDTPGAMFRPKGVSVDSENHIYVVEGASARVQIYDREGHW 301
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
+ FG +G+ + + P G+ +D + I V DS N RIQ+ G RA G
Sbjct: 302 LYWFGGKGTGPEEFQLPSGIFIDHEDRIFVVDSFNRRIQVLHYYGVGKRAGG 353
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 42/217 (19%)
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDV------------NGR--------------- 176
L P+ IAV + R IV+D + V IFD+ G+
Sbjct: 80 LVRPYSIAVDSRGRAIVTDPGANGVHIFDLAQHKYKFVERNEKGKESMLQPQCVAVDAHD 139
Query: 177 -------------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDSNNHRV 222
VF +DG + G++ G + P IA+ S RV ++D+ ++
Sbjct: 140 NFYVTDSETGKVFVFNADGKYQRSIGALKGGEGFFKRPTGIAIDSAAQRVYITDTLRDKI 199
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
+ D+ G+V+ + G GSE G+L +P + + + V D+ N RIQIF DG + +
Sbjct: 200 YVTDMQGQVLATIGKPGSEPGELHYPTELRIVGDELVVV-DAMNFRIQIFGKDGSYRGSI 258
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G G +GV+V S +I V + + R+Q++
Sbjct: 259 GEIGDTPGAMFRPKGVSVDSENHIYVVEGASARVQIY 295
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-----AFTW 99
IG GSEPG +P + + D +VV D+ N R+Q+ + + + A
Sbjct: 212 IGKPGSEPGELHYPTELRIVGDE-LVVVDAMNFRIQIFGKDGSYRGSIGEIGDTPGAMFR 270
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G++V +N I V + ++ RVQ++ +G ++ FG G + + P I + + +R+
Sbjct: 271 PKGVSVDSENHIYVVEGASARVQIYDREGHWLYWFGGKGTGPEEFQLPSGIFIDHEDRIF 330
Query: 160 VSDSNNHRVQIFDVNG 175
V DS N R+Q+ G
Sbjct: 331 VVDSFNRRIQVLHYYG 346
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 15/98 (15%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--------- 95
IG G PG P+G++V +N I V + ++ RVQ+ +D + + ++
Sbjct: 258 IGEIGDTPGAMFRPKGVSVDSENHIYVVEGASARVQI----YDREGHWLYWFGGKGTGPE 313
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGK 133
F P GI + ++ I V DS N R+QV G VGK
Sbjct: 314 EFQLPSGIFIDHEDRIFVVDSFNRRIQVLHYYG--VGK 349
>gi|443311037|ref|ZP_21040672.1| PEP-CTERM putative exosortase interaction domain-containing protein
[Synechocystis sp. PCC 7509]
gi|442778886|gb|ELR89144.1| PEP-CTERM putative exosortase interaction domain-containing protein
[Synechocystis sp. PCC 7509]
Length = 387
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 109/226 (48%), Gaps = 12/226 (5%)
Query: 100 PRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTN 156
P+GIAV G N + VA+ ++QVF S+G F+ FG G+ GQ + IA NT
Sbjct: 58 PQGIAVQEGTGN-VFVANDVTDQIQVFNSEGNFLQAFGGKGSGPGQFDGQSAIAFEPNTG 116
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQS--DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
D N+R+ IFD G +S G F G + P I N V
Sbjct: 117 NFYAGDVVNNRINIFDPQGNYLKSIAQGQFSGLV-----EGRPFYGPSGIVFDNNGNGFV 171
Query: 215 SDSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
D ++ R+ F+ + G V S GS G+ GQ + P GV + G + V D NNRIQ+
Sbjct: 172 GDYSSDRILKFNSSSGEVTGSIGSNGTAPGQFQGPSGVGITPDGNLVVTDQFNNRIQVID 231
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G+ L FG G+GDGEF V GNI V D N R+Q+F
Sbjct: 232 QEGKALLTFGKQGTGDGEFNQPIDAEVDEEGNIYVTDSINSRVQIF 277
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 35 YLQKRRLQF---------KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH 85
Y R L+F IGS G+ PG F P G+ + PD ++VV D N+R+QV
Sbjct: 174 YSSDRILKFNSSSGEVTGSIGSNGTAPGQFQGPSGVGITPDGNLVVTDQFNNRIQVI--- 230
Query: 86 FDLKTNCVFL---------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS 136
D + + F P V + +I V DS N RVQ+F G F+ FG
Sbjct: 231 -DQEGKALLTFGKQGTGDGEFNQPIDAEVDEEGNIYVTDSINSRVQIFDKSGNFLSAFGE 289
Query: 137 MGNKA 141
A
Sbjct: 290 PARDA 294
>gi|397781715|ref|YP_006546188.1| Tripartite motif-containing protein 71 [Methanoculleus bourgensis
MS2]
gi|396940217|emb|CCJ37472.1| Tripartite motif-containing protein 71 AltName: Full=Lin-41 homolog
[Methanoculleus bourgensis MS2]
Length = 1103
Score = 107 bits (267), Expect = 7e-21, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 12/190 (6%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+ +GS+G G+ P IAV V V+D + R+Q FD S G F+ ++G
Sbjct: 32 LIATWGSLGADDGRFNRPTGIAVDAEGNVYVADYCD-RIQKFD-------STGAFLLQWG 83
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
S G+ G+ P IA+ +V V D +R+Q+FD NG + +GS G+ E QL++P+
Sbjct: 84 SSGSGDGEFYQPDNIALDADGKVYVVDY--YRIQVFDSNGTFLKKWGSYGTGEEQLQYPQ 141
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+A D G V G I+ F DG FL ++G +G+ DGEF V V + GN+ V
Sbjct: 142 SIAFDADGNAYVIAGGG--IKKFDSDGNFLTSWGGFGTYDGEFHNAVDVVVDAAGNVYVA 199
Query: 310 DRENHRIQVF 319
D N+RIQ+F
Sbjct: 200 DCYNNRIQMF 209
Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats.
Identities = 74/213 (34%), Positives = 112/213 (52%), Gaps = 22/213 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P GIAV + ++ VAD + R+Q F S G F+ ++GS G+ G+ P IA+
Sbjct: 46 FNRPTGIAVDAEGNVYVADYCD-RIQKFDSTGAFLLQWGSSGSGDGEFYQPDNIALDADG 104
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVS 215
+V V D +R+Q+FD S+GTF+ K+GS G QL++P IA ++ N +++
Sbjct: 105 KVYVVDY--YRIQVFD-------SNGTFLKKWGSYGTGEEQLQYPQSIAFDADGNAYVIA 155
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
++ FD +G +TS+G G+ +G+ V VD G + V D NNRIQ+F
Sbjct: 156 GGG---IKKFDSDGNFLTSWGGFGTYDGEFHNAVDVVVDAAGNVYVADCYNNRIQMFNST 212
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
G FL W G G+ V S G++LV
Sbjct: 213 GAFLLK---WQVGYP-----YGITVDSAGDVLV 237
Score = 93.6 bits (231), Expect = 1e-16, Method: Composition-based stats.
Identities = 81/284 (28%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--------- 96
GS G++ G F P GIAV + ++ VAD + R+Q FD T L
Sbjct: 37 GSLGADDGRFNRPTGIAVDAEGNVYVADYCD-RIQ----KFD-STGAFLLQWGSSGSGDG 90
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P IA+ D + V D +R+QVF S+GTF+ K+GS G QL++P IA
Sbjct: 91 EFYQPDNIALDADGKVYVVDY--YRIQVFDSNGTFLKKWGSYGTGEEQLQYPQSIAF--- 145
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
D++ + I + F SDG F+ +G G G+ + + V V V+
Sbjct: 146 ------DADGNAYVIAGGGIKKFDSDGNFLTSWGGFGTYDGEFHNAVDVVVDAAGNVYVA 199
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D N+R+Q+F+ G + + Q+ +P G+ VD G + V S + ++ +
Sbjct: 200 DCYNNRIQMFNSTGAFLLKW--------QVGYPYGITVDSAGDVLVAASSTSVLKFDSFG 251
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
R+ G GSG + + V ++G + V +H ++VF
Sbjct: 252 NLLARSLG--GSG-------KDITVGADGTVYVT--SDHCVRVF 284
>gi|291225545|ref|XP_002732762.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 731
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 118/248 (47%), Gaps = 22/248 (8%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV-------FL 95
+ GS GS F P G+A+ + IVVAD++NHR+Q+ D + +C+ F
Sbjct: 464 YSFGSEGSRKSYFNIPWGVAINNNGQIVVADTNNHRIQI----LDWRGHCLNCLKCDLFP 519
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
PR IAV D V D N ++ V ++ + FG + +P+ + ++N
Sbjct: 520 KPFTPRDIAVSDDGKYFVTDRGNKQI-VVCTEEHVITTFG-----PNEGINPYGVTLTND 573
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
V+V+D R I R + G V G+ GQ HP +AV+ N++ +S
Sbjct: 574 GCVLVTDRQKDRHYI-----RKYTISGEHVMVTEIPGSTEGQPIHPDSVAVNTNNQIYIS 628
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
DS NHR+QI D + + SFGS G+ + P GV +D + + D+GN RI ++
Sbjct: 629 DSRNHRIQIMDSSLHYLKSFGSLGNGINKFNVPCGVDIDKDNNVYICDTGNKRICKYSAT 688
Query: 276 GQFLRAFG 283
G+ +
Sbjct: 689 GELIEYIA 696
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 131 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVF------------ 178
V FGS G++ P +A++N +++V+D+NNHR+QI D G
Sbjct: 463 VYSFGSEGSRKSYFNIPWGVAINNNGQIVVADTNNHRIQILDWRGHCLNCLKCDLFPKPF 522
Query: 179 -------QSDGT-FVGKFGSMGNKAGQLEH------------PHYIAVSNTNRVIVSD-- 216
DG FV G+ EH P+ + ++N V+V+D
Sbjct: 523 TPRDIAVSDDGKYFVTDRGNKQIVVCTEEHVITTFGPNEGINPYGVTLTNDGCVLVTDRQ 582
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ H ++ + ++G + GS EGQ P VAV+ I + DS N+RIQI
Sbjct: 583 KDRHYIRKYTISGEHVMVTEIPGSTEGQPIHPDSVAVNTNNQIYISDSRNHRIQIMDSSL 642
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+L++FG G+G +F GV + + N+ +CD N RI
Sbjct: 643 HYLKSFGSLGNGINKFNVPCGVDIDKDNNVYICDTGNKRI 682
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +AV +N I ++DS NHR+Q+ S ++ FGS+GN + P + + N V
Sbjct: 614 PDSVAVNTNNQIYISDSRNHRIQIMDSSLHYLKSFGSLGNGINKFNVPCGVDIDKDNNVY 673
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN--RVIVSDS 217
+ D+ N R+ + G + + ++ + G+++ P IAVS +++V++
Sbjct: 674 ICDTGNKRICKYSATGELIE----YIAE--------GKVDCPTCIAVSKDYPLKIVVNEC 721
Query: 218 NNHRVQIFDV 227
H +++ V
Sbjct: 722 RLHSIKMLYV 731
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ SFGSEGS + P GVA+++ G I V D+ N+RIQI G L C D
Sbjct: 463 VYSFGSEGSRKSYFNIPWGVAINNNGQIVVADTNNHRIQILDWRGHCLNCLKC----DLF 518
Query: 292 FKGL--EGVAVMSNGNILVCDRENHRIQV 318
K +AV +G V DR N +I V
Sbjct: 519 PKPFTPRDIAVSDDGKYFVTDRGNKQIVV 547
>gi|39995724|ref|NP_951675.1| NHL repeat domain-containing protein [Geobacter sulfurreducens PCA]
gi|39982488|gb|AAR33948.1| NHL repeat domain lipoprotein [Geobacter sulfurreducens PCA]
Length = 361
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 109/225 (48%), Gaps = 11/225 (4%)
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
++ T P + + I VAD V VF V G A Q P + +
Sbjct: 76 MSLTKPLDVYADGQDRIYVADPGLRGVVVFNMKERSVSMLGG-PQAANQFNTPVSVTGDS 134
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ VSD+ + IFD F+ F+ KA + R++V
Sbjct: 135 QGNIYVSDAEKGGILIFDR----FEVPRRFID------TKAAVKRNTDIAVDEKGQRILV 184
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
D+ HR+ I D+ G ++++FG G E+G+ FP VA++ +G I VGD+ N R+QIF
Sbjct: 185 VDAREHRIAILDMQGGLLSAFGKRGIEDGEFNFPVAVAINHKGEIIVGDAMNARVQIFDQ 244
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
DG+FLR FG G G +F+ ++GVAV S +I V + + H++ +F
Sbjct: 245 DGKFLRKFGRRGDGPADFQIMKGVAVDSEDHIYVTEGKGHKLIIF 289
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 15/178 (8%)
Query: 150 IAVSNT-NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 208
IAV R++V D+ HR+ I D+ G + + FG G + G+ P +A+++
Sbjct: 173 IAVDEKGQRILVVDAREHRIAILDMQGGLLSA-------FGKRGIEDGEFNFPVAVAINH 225
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
+IV D+ N RVQIFD +G+ + FG G + +GVAVD + +I V + ++
Sbjct: 226 KGEIIVGDAMNARVQIFDQDGKFLRKFGRRGDGPADFQIMKGVAVDSEDHIYVTEGKGHK 285
Query: 269 IQIFTPDGQFLRAFGCWGS-------GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ IF +G++L G S G F +GV + I V D+ N R QVF
Sbjct: 286 LIIFGTNGEYLLTVGGLYSAITTGKQAPGGFVIPQGVFIDDKDVIYVVDQLNRRFQVF 343
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 65/180 (36%), Gaps = 42/180 (23%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAV 105
G RG E G F +P +A+ I+V D+ N RVQ
Sbjct: 206 GKRGIEDGEFNFPVAVAINHKGEIIVGDAMNARVQ------------------------- 240
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
+F DG F+ KFG G+ + +AV + + + V++
Sbjct: 241 -----------------IFDQDGKFLRKFGRRGDGPADFQIMKGVAVDSEDHIYVTEGKG 283
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
H++ IF NG + G + G P + + + + + V D N R Q+F
Sbjct: 284 HKLIIFGTNGEYLLTVGGLYSAITTGKQAPGGFVIPQGVFIDDKDVIYVVDQLNRRFQVF 343
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 14/95 (14%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF---PHFDLKTNCVFLA---- 96
K G RG P F +G+AV ++ I V + H++ + F + L ++ A
Sbjct: 251 KFGRRGDGPADFQIMKGVAVDSEDHIYVTEGKGHKL-IIFGTNGEYLLTVGGLYSAITTG 309
Query: 97 ------FTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
F P+G+ + + I V D N R QVFQ
Sbjct: 310 KQAPGGFVIPQGVFIDDKDVIYVVDQLNRRFQVFQ 344
>gi|260801792|ref|XP_002595779.1| hypothetical protein BRAFLDRAFT_249004 [Branchiostoma floridae]
gi|229281027|gb|EEN51791.1| hypothetical protein BRAFLDRAFT_249004 [Branchiostoma floridae]
Length = 204
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 21/222 (9%)
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P GI V + I+VADS + ++Q +G F+ KFG G+ GQL P I ++ +
Sbjct: 2 YPTGITVDNKDYILVADSHTAYIYMYQENGRFLLKFGGKGSNNGQLSLPIDICTDSSRHI 61
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
IV+DS N RV++F G++ + T V GQL V +
Sbjct: 62 IVADSGNQRVELFTSRGKLIRHIATDVDPLSIAMGTEGQL---------------VMKTV 106
Query: 219 NHR--VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
HR V++F +NG ++ SFG L +P G+ VD++ YI V DS I ++ +G
Sbjct: 107 GHRGAVKVFGMNGMLVRSFGRRQG----LMYPTGITVDNKDYILVADSRTAYIYMYQENG 162
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
+FL F GS +G+ V S+ +I+V D N R+++
Sbjct: 163 RFLLKFAGKGSNNGQLNLPIDVCTDSSRHIIVADSGNQRVEL 204
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 16/193 (8%)
Query: 34 QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV 93
Y + R K G +GS G + P I I+VADS N RV++ L +
Sbjct: 26 MYQENGRFLLKFGGKGSNNGQLSLPIDICTDSSRHIIVADSGNQRVELFTSRGKLIRHIA 85
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHR--VQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P IA+G + +V+ + HR V+VF +G V FG + L +P I
Sbjct: 86 --TDVDPLSIAMGTEGQLVMK-TVGHRGAVKVFGMNGMLVRSFG----RRQGLMYPTGIT 138
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V N + ++V+DS + ++ NGR F+ KF G+ GQL P + ++
Sbjct: 139 VDNKDYILVADSRTAYIYMYQENGR-------FLLKFAGKGSNNGQLNLPIDVCTDSSRH 191
Query: 212 VIVSDSNNHRVQI 224
+IV+DS N RV++
Sbjct: 192 IIVADSGNQRVEL 204
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 247 FPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNI 306
+P G+ VD++ YI V DS I ++ +G+FL FG GS +G+ + S+ +I
Sbjct: 2 YPTGITVDNKDYILVADSHTAYIYMYQENGRFLLKFGGKGSNNGQLSLPIDICTDSSRHI 61
Query: 307 LVCDRENHRIQVF 319
+V D N R+++F
Sbjct: 62 IVADSGNQRVELF 74
>gi|443714727|gb|ELU07004.1| hypothetical protein CAPTEDRAFT_224968 [Capitella teleta]
Length = 322
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 113/231 (48%), Gaps = 16/231 (6%)
Query: 57 WPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADS 116
+P +A +N VADS H++ V F L+ + + WP IA PD +IVV D
Sbjct: 59 YPVDVAFIDENIFAVADSEGHKI-VVFNIKTLEWSQIGTEKVWPNAIAATPDKNIVVTDR 117
Query: 117 SNHRVQVFQSDGTFVGKFG-----SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
+ +G + + + +PH + V+ V V+D+ H V+IF
Sbjct: 118 KRKACVTYDLEGRLLSSWDVYIPEDVEEGYETPCYPHGVTVTKNGDVAVTDTGTHSVKIF 177
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
S+G + +FG+ G +L P + A +N++ ++VSD+ N+ V+IFD G
Sbjct: 178 -------TSEGELLKEFGAKGTDIWELRLPFFCATNNSDNIVVSDNMNYCVKIFDRTGNC 230
Query: 232 ITSFGSEGSEEGQLKF--PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
++ GS G + GQ +F P GV D + I V D NR+ +F +G+F+R
Sbjct: 231 LSQIGS-GQDWGQRRFECPYGVCADLEDNIVVADYETNRVSLFHQNGRFIR 280
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 33/234 (14%)
Query: 57 WPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV--------------FLAFTWPRG 102
WP IA PD +IVV D + + C +DL+ + + +P G
Sbjct: 100 WPNAIAATPDKNIVVTD---RKRKACVT-YDLEGRLLSSWDVYIPEDVEEGYETPCYPHG 155
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ V + + V D+ H V++F S+G + +FG+ G +L P + A +N++ ++VSD
Sbjct: 156 VTVTKNGDVAVTDTGTHSVKIFTSEGELLKEFGAKGTDIWELRLPFFCATNNSDNIVVSD 215
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ--LEHPHYIAVSNTNRVIVSDSNNH 220
+ N+ V+IFD G G+ G GQ E P+ + + ++V+D +
Sbjct: 216 NMNYCVKIFDRTGNCLSQIGS--------GQDWGQRRFECPYGVCADLEDNIVVADYETN 267
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG--NNRIQIF 272
RV +F NGR I ++G + P GVAV G++ V +S N I+++
Sbjct: 268 RVSLFHQNGRFIRHLLTKGD---KCNSPCGVAVGPCGHLVVTESNLDYNNIKVY 318
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 13/224 (5%)
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P +A +N VADS H++ VF + G+ + P+ IA + +
Sbjct: 59 YPVDVAFIDENIFAVADSEGHKIVVFNIKTLEWSQIGT------EKVWPNAIAATPDKNI 112
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+V+D +D+ GR+ S ++ + G + +PH + V+ V V+D+
Sbjct: 113 VVTDRKRKACVTYDLEGRLLSSWDVYIPEDVEEGYETPC--YPHGVTVTKNGDVAVTDTG 170
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
H V+IF G ++ FG++G++ +L+ P A ++ I V D+ N ++IF G
Sbjct: 171 THSVKIFTSEGELLKEFGAKGTDIWELRLPFFCATNNSDNIVVSDNMNYCVKIFDRTGNC 230
Query: 279 LRAFGC---WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L G WG F+ GV NI+V D E +R+ +F
Sbjct: 231 LSQIGSGQDWGQ--RRFECPYGVCADLEDNIVVADYETNRVSLF 272
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 90/181 (49%), Gaps = 18/181 (9%)
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
+++P +A + N V+DS H++ +F++ + GT + P+
Sbjct: 57 VKYPVDVAFIDENIFAVADSEGHKIVVFNIKTLEWSQIGT-------------EKVWPNA 103
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG---SEGSEEGQLK--FPRGVAVDDQGY 258
IA + ++V+D +D+ GR+++S+ E EEG +P GV V G
Sbjct: 104 IAATPDKNIVVTDRKRKACVTYDLEGRLLSSWDVYIPEDVEEGYETPCYPHGVTVTKNGD 163
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
++V D+G + ++IFT +G+ L+ FG G+ E + A ++ NI+V D N+ +++
Sbjct: 164 VAVTDTGTHSVKIFTSEGELLKEFGAKGTDIWELRLPFFCATNNSDNIVVSDNMNYCVKI 223
Query: 319 F 319
F
Sbjct: 224 F 224
>gi|260782182|ref|XP_002586170.1| hypothetical protein BRAFLDRAFT_255105 [Branchiostoma floridae]
gi|229271263|gb|EEN42181.1| hypothetical protein BRAFLDRAFT_255105 [Branchiostoma floridae]
Length = 219
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 17/221 (7%)
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P IAV D +I+V+ ++ V ++ G F+ KFG M + GQL+ P I ++ +
Sbjct: 15 FPEYIAVDDDGNILVSAWNSDFVYLYDESGNFLFKFGGMRSSEGQLKRPFGICTDSSGHI 74
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDS 217
IV+DS N RVQIF + G H IAV+ T+ V+++D+
Sbjct: 75 IVADSGNKRVQIFT--------------RLGEFVRTVSTGHHFRGIAVNVRTSHVLITDA 120
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
+ V +F +G ++ + S G++K PR + VD +G I V D +N + ++ G+
Sbjct: 121 DQGEVLVFRPDGSLVRTV--RYSLAGEIKRPRYITVDGEGNILVSDYNSNSVYVYDESGK 178
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
F FG GSG+G+ G G+ G+I+V D N R+Q+
Sbjct: 179 FPFQFGGLGSGEGQLNGPRGICTNRLGHIIVADSRNKRVQI 219
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 92/191 (48%), Gaps = 12/191 (6%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + FK G S G P GI I+VADS N RVQ+ F V
Sbjct: 40 YDESGNFLFKFGGMRSSEGQLKRPFGICTDSSGHIIVADSGNKRVQI-FTRLGEFVRTVS 98
Query: 95 LAFTWPRGIAVGPDNS-IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
+ RGIAV S +++ D+ V VF+ DG+ V + AG+++ P YI V
Sbjct: 99 TGHHF-RGIAVNVRTSHVLITDADQGEVLVFRPDGSLVRTVRY--SLAGEIKRPRYITVD 155
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
++VSD N++ V ++D +G+ F +FG +G+ GQL P I + +I
Sbjct: 156 GEGNILVSDYNSNSVYVYDESGK-------FPFQFGGLGSGEGQLNGPRGICTNRLGHII 208
Query: 214 VSDSNNHRVQI 224
V+DS N RVQI
Sbjct: 209 VADSRNKRVQI 219
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
+ G++ P YIAV + ++VS N+ V ++D +G + FG S EGQLK P G+
Sbjct: 9 QTGEMRFPEYIAVDDDGNILVSAWNSDFVYLYDESGNFLFKFGGMRSSEGQLKRPFGICT 68
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
D G+I V DSGN R+QIFT G+F+R S F+G+ + ++L+ D +
Sbjct: 69 DSSGHIIVADSGNKRVQIFTRLGEFVRTV----STGHHFRGI--AVNVRTSHVLITDADQ 122
Query: 314 HRIQVF 319
+ VF
Sbjct: 123 GEVLVF 128
>gi|260788878|ref|XP_002589476.1| hypothetical protein BRAFLDRAFT_222338 [Branchiostoma floridae]
gi|229274653|gb|EEN45487.1| hypothetical protein BRAFLDRAFT_222338 [Branchiostoma floridae]
Length = 236
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 118/234 (50%), Gaps = 24/234 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P +AV D + VAD+ N RVQVF G F F + N L P +AV
Sbjct: 13 FYSPTDVAVSGDR-LYVADNGNKRVQVFDLGGNFCSSFSTDVNPL-SLASPWGLAVQRDG 70
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
RV+V+D + H + +F ++DGT V + G G G+ P++I V + +IV+D
Sbjct: 71 RVVVADPDKHSIFLF-------EADGTLVKQVGGQGQGEGKFNKPYFICVDEEDNIIVAD 123
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN---------- 266
++NHRVQ+FD N FG +G E + P GV+VD +G + + + G
Sbjct: 124 TSNHRVQVFDKNLNFQHKFGQKGIEPQDMWGPTGVSVDCEGNVVLSNLGETSDVGGVEHG 183
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLE-GVAVMSNGNILVCDRENHRIQVF 319
++Q+F PDG FL S DG+ G+AV +G++ V D +H I+ +
Sbjct: 184 KKLQVFDPDGTFLSTI----SSDGDKLNWPCGLAVAEDGHVFVADSRDHCIKKY 233
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 128/248 (51%), Gaps = 33/248 (13%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL--------KTNCVF 94
+ G +G + G F P +AV D + VAD+ N RVQV FDL T+
Sbjct: 1 LRFGQKGRQQGQFYSPTDVAVSGDR-LYVADNGNKRVQV----FDLGGNFCSSFSTDVNP 55
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
L+ P G+AV D +VVAD H + +F++DGT V + G G G+ P++I V
Sbjct: 56 LSLASPWGLAVQRDGRVVVADPDKHSIFLFEADGTLVKQVGGQGQGEGKFNKPYFICVDE 115
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ +IV+D++NHRVQ+FD N F KFG G + + P ++V V++
Sbjct: 116 EDNIIVADTSNHRVQVFDKN-------LNFQHKFGQKGIEPQDMWGPTGVSVDCEGNVVL 168
Query: 215 SD----------SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDS 264
S+ + ++Q+FD +G +++ S+G +L +P G+AV + G++ V DS
Sbjct: 169 SNLGETSDVGGVEHGKKLQVFDPDGTFLSTISSDGD---KLNWPCGLAVAEDGHVFVADS 225
Query: 265 GNNRIQIF 272
++ I+ +
Sbjct: 226 RDHCIKKY 233
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 9/176 (5%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
+FG G + GQ P +AVS +R+ V+D+ N RVQ+FD+ G S T V
Sbjct: 2 RFGQKGRQQGQFYSPTDVAVSG-DRLYVADNGNKRVQVFDLGGNFCSSFSTDVNPL---- 56
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
L P +AV RV+V+D + H + +F+ +G ++ G +G EG+ P +
Sbjct: 57 ----SLASPWGLAVQRDGRVVVADPDKHSIFLFEADGTLVKQVGGQGQGEGKFNKPYFIC 112
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
VD++ I V D+ N+R+Q+F + F FG G + G GV+V GN+++
Sbjct: 113 VDEEDNIIVADTSNHRVQVFDKNLNFQHKFGQKGIEPQDMWGPTGVSVDCEGNVVL 168
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
+FG G + GQ P +AVS +R+ V+D+ N RVQ+FD+ G +SF ++ + L
Sbjct: 2 RFGQKGRQQGQFYSPTDVAVSG-DRLYVADNGNKRVQVFDLGGNFCSSFSTDVNPL-SLA 59
Query: 247 FPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNI 306
P G+AV G + V D + I +F DG ++ G G G+G+F + V NI
Sbjct: 60 SPWGLAVQRDGRVVVADPDKHSIFLFEADGTLVKQVGGQGQGEGKFNKPYFICVDEEDNI 119
Query: 307 LVCDRENHRIQVF 319
+V D NHR+QVF
Sbjct: 120 IVADTSNHRVQVF 132
>gi|260792732|ref|XP_002591368.1| hypothetical protein BRAFLDRAFT_93989 [Branchiostoma floridae]
gi|229276573|gb|EEN47379.1| hypothetical protein BRAFLDRAFT_93989 [Branchiostoma floridae]
Length = 663
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 129/278 (46%), Gaps = 36/278 (12%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT----NCVFLAFT 98
IG G G F++P +AV D +I V++ N RVQ+ FD +T C +
Sbjct: 396 LTIGRAGRGEGEFSFPSDVAVDMDGNIAVSEWGNKRVQM----FDARTGQSLRCFPVDCE 451
Query: 99 WPRGIAVGPDNSIVVA-------DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
RGI + + ++ + N +QV+ G K L P +A
Sbjct: 452 CARGIDMDSNGQFILTFENRYYGTTGNQAIQVYSRKGKLTKTL-----KHDCLRDPIGVA 506
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V R++V+D + Q DG+ + G GQL++P +IAV +
Sbjct: 507 VLQDGRMVVTDYTQKSCLL-------LQPDGSLIRDIGK-----GQLQNPLFIAVDESRD 554
Query: 212 V-IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
+ V+D H+V +FD+ G++ SFG G +G+L++P G+ VD G I V + N R+Q
Sbjct: 555 LFFVTDCWAHKVFVFDLEGKLKFSFGKTGFNDGELEYPTGITVDPAGNIIVVNRDNRRLQ 614
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
+F PDG +LR + G + + G+A+ + +I V
Sbjct: 615 VFGPDGTYLRTV---ATVKGGYPLVVGIALTPDNHIAV 649
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 43/233 (18%)
Query: 125 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN---------- 174
+S T V G G G+ P +AV + VS+ N RVQ+FD
Sbjct: 389 KSRDTPVLTIGRAGRGEGEFSFPSDVAVDMDGNIAVSEWGNKRVQMFDARTGQSLRCFPV 448
Query: 175 ------GRVFQSDGTFVGKF-----GSMGNKAGQ----------------LEHPHYIAVS 207
G S+G F+ F G+ GN+A Q L P +AV
Sbjct: 449 DCECARGIDMDSNGQFILTFENRYYGTTGNQAIQVYSRKGKLTKTLKHDCLRDPIGVAVL 508
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGN 266
R++V+D + +G +I G +GQL+ P +AVD+ + V D
Sbjct: 509 QDGRMVVTDYTQKSCLLLQPDGSLIRDIG-----KGQLQNPLFIAVDESRDLFFVTDCWA 563
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+++ +F +G+ +FG G DGE + G+ V GNI+V +R+N R+QVF
Sbjct: 564 HKVFVFDLEGKLKFSFGKTGFNDGELEYPTGITVDPAGNIIVVNRDNRRLQVF 616
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+L+F G G G +P GI V P +I+V + N R+QV P + +
Sbjct: 574 KLKFSFGKTGFNDGELEYPTGITVDPAGNIIVVNRDNRRLQVFGPDGTYLRTVATVKGGY 633
Query: 100 PR--GIAVGPDNSIVVADSSNHRVQVFQ 125
P GIA+ PDN I VA + V++++
Sbjct: 634 PLVVGIALTPDNHIAVACYMGNCVELYR 661
>gi|375107446|ref|ZP_09753707.1| gluconolactonase [Burkholderiales bacterium JOSHI_001]
gi|374668177|gb|EHR72962.1| gluconolactonase [Burkholderiales bacterium JOSHI_001]
Length = 364
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 120/253 (47%), Gaps = 28/253 (11%)
Query: 36 LQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD-----LKT 90
LQ+RR + +IG+ EPG P G+ + ++ V D S RVQV +D L+T
Sbjct: 111 LQQRRYK-RIGT--EEPGALRMPFGLDLDSAGNLYVVDGSAKRVQV----YDGEGKHLRT 163
Query: 91 NCVFLAFTWPRGIAVGPDNSIVV------ADSSNHRVQVFQSD-GTFVGKFGSMGNKAGQ 143
+ ++ P G+A+ + D +H+V D G + FG G+ G+
Sbjct: 164 LGADIKWSRPAGMALDDARRRIYVVDAGGVDKPDHKVWALDMDSGKLLFDFGQRGSAPGE 223
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
L P AV+ V+V D N RVQ VF ++G F+ FG++G ++GQ P
Sbjct: 224 LNLPRDAAVNAAGEVLVVDGGNFRVQ-------VFSAEGKFLRGFGAVGRQSGQFSRPKE 276
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF--PRGVAVDDQGYISV 261
IA+ + D+ QIFD GR++ G+ +G KF P G+AVD G I +
Sbjct: 277 IALDRQGNAYIVDTAFGNFQIFDPEGRLLLDVGTRAPADGPAKFMLPSGIAVDLDGRIYM 336
Query: 262 GDSGNNRIQIFTP 274
D ++++F P
Sbjct: 337 VDQFFRKVEVFRP 349
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 108/232 (46%), Gaps = 18/232 (7%)
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
A P G+ + ++ V D S RVQV+ +G + G+ + P +A+ +
Sbjct: 126 ALRMPFGLDLDSAGNLYVVDGSAKRVQVYDGEGKHLRTLGA----DIKWSRPAGMALDDA 181
Query: 156 NRVIVS------DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
R I D +H+V D++ G + FG G+ G+L P AV+
Sbjct: 182 RRRIYVVDAGGVDKPDHKVWALDMDS------GKLLFDFGQRGSAPGELNLPRDAAVNAA 235
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
V+V D N RVQ+F G+ + FG+ G + GQ P+ +A+D QG + D+
Sbjct: 236 GEVLVVDGGNFRVQVFSAEGKFLRGFGAVGRQSGQFSRPKEIALDRQGNAYIVDTAFGNF 295
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGL--EGVAVMSNGNILVCDRENHRIQVF 319
QIF P+G+ L G DG K + G+AV +G I + D+ +++VF
Sbjct: 296 QIFDPEGRLLLDVGTRAPADGPAKFMLPSGIAVDLDGRIYMVDQFFRKVEVF 347
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 60/226 (26%)
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
L P+ +A + R+ + D+ V ++D+ R ++ GT + G L P
Sbjct: 83 LGKPYGVA-ARAGRIYIGDTVGRMVVLYDLQQRRYKRIGT---------EEPGALRMPFG 132
Query: 204 IAVSNTNRVIVSDSNNHRVQIFD------------------------------------- 226
+ + + + V D + RVQ++D
Sbjct: 133 LDLDSAGNLYVVDGSAKRVQVYDGEGKHLRTLGADIKWSRPAGMALDDARRRIYVVDAGG 192
Query: 227 -------------VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
+G+++ FG GS G+L PR AV+ G + V D GN R+Q+F+
Sbjct: 193 VDKPDHKVWALDMDSGKLLFDFGQRGSAPGELNLPRDAAVNAAGEVLVVDGGNFRVQVFS 252
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G+FLR FG G G+F + +A+ GN + D Q+F
Sbjct: 253 AEGKFLRGFGAVGRQSGQFSRPKEIALDRQGNAYIVDTAFGNFQIF 298
>gi|291242634|ref|XP_002741211.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 721
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 113/224 (50%), Gaps = 23/224 (10%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----AFTWPRGIAVGPDNS-IV 112
PR +A+ + + D+ N +V V FD + + T P GIA+ P N +
Sbjct: 512 PRHVAISKEGYYFITDNRNKQVVV----FDKNSKVIRCFGNQELTSPMGIAISPVNDRVY 567
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 172
V+D S H ++++ DG +V FGS GN Q HP + + N VIV++ NNHR+Q+ +
Sbjct: 568 VSDCSAHCIRIYTQDGEYVKSFGSQGNGQCQFYHPWGMTIDNKGNVIVAEYNNHRIQVCN 627
Query: 173 VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
SDG F+ FGS G+ Q +A N + V D NN RV +D +G +
Sbjct: 628 -------SDGVFLFSFGSQGSANNQFNGLWDVACDNDGNMYVCDHNN-RVMKYDSHGVFV 679
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQ---GYISVGDSGNNRIQIFT 273
+ S++ L++P G++V GY+ V D G++ I++F
Sbjct: 680 SRI---DSDQDALQYPTGISVTGDKPFGYVVVADRGSHCIKVFA 720
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 96/168 (57%), Gaps = 13/168 (7%)
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
P ++A+S ++D+ N +V +FD N +V + FG+ +L P IA+
Sbjct: 512 PRHVAISKEGYYFITDNRNKQVVVFDKNSKVIRC-------FGNQ-----ELTSPMGIAI 559
Query: 207 SNTN-RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG 265
S N RV VSD + H ++I+ +G + SFGS+G+ + Q P G+ +D++G + V +
Sbjct: 560 SPVNDRVYVSDCSAHCIRIYTQDGEYVKSFGSQGNGQCQFYHPWGMTIDNKGNVIVAEYN 619
Query: 266 NNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
N+RIQ+ DG FL +FG GS + +F GL VA ++GN+ VCD N
Sbjct: 620 NHRIQVCNSDGVFLFSFGSQGSANNQFNGLWDVACDNDGNMYVCDHNN 667
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 112/224 (50%), Gaps = 20/224 (8%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RV 158
PR +A+ + + D+ N +V VF + + FG+ +L P IA+S N RV
Sbjct: 512 PRHVAISKEGYYFITDNRNKQVVVFDKNSKVIRCFGNQ-----ELTSPMGIAISPVNDRV 566
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
VSD + H + R++ DG +V FGS GN Q HP + + N VIV++ N
Sbjct: 567 YVSDCSAHCI-------RIYTQDGEYVKSFGSQGNGQCQFYHPWGMTIDNKGNVIVAEYN 619
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
NHR+Q+ + +G + SFGS+GS Q VA D+ G + V D NNR+ + G F
Sbjct: 620 NHRIQVCNSDGVFLFSFGSQGSANNQFNGLWDVACDNDGNMYVCDH-NNRVMKYDSHGVF 678
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSN---GNILVCDRENHRIQVF 319
+ S + G++V + G ++V DR +H I+VF
Sbjct: 679 VSRID---SDQDALQYPTGISVTGDKPFGYVVVADRGSHCIKVF 719
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 24/151 (15%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y Q GS+G+ F P G+ + +++VA+ +NHR+QVC ++ VF
Sbjct: 579 YTQDGEYVKSFGSQGNGQCQFYHPWGMTIDNKGNVIVAEYNNHRIQVC------NSDGVF 632
Query: 95 L-----------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
L F +A D ++ V D +N RV + S G FV + S
Sbjct: 633 LFSFGSQGSANNQFNGLWDVACDNDGNMYVCDHNN-RVMKYDSHGVFVSRIDS---DQDA 688
Query: 144 LEHPHYIAVSNTN---RVIVSDSNNHRVQIF 171
L++P I+V+ V+V+D +H +++F
Sbjct: 689 LQYPTGISVTGDKPFGYVVVADRGSHCIKVF 719
>gi|260826193|ref|XP_002608050.1| hypothetical protein BRAFLDRAFT_74999 [Branchiostoma floridae]
gi|229293400|gb|EEN64060.1| hypothetical protein BRAFLDRAFT_74999 [Branchiostoma floridae]
Length = 585
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 116/239 (48%), Gaps = 27/239 (11%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV---- 152
F PRG+AV + I VAD N R+Q F DG FV KF + GQ P+ +A+
Sbjct: 351 FDRPRGVAVSEEGQIFVADYINARIQAFTIDGMFVNKFPTT-TSGGQKIFPYDVAMDGEG 409
Query: 153 ---------SNTNRVIVSDSNNHR---VQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
S T+ V S +H + F+ +V+ DG + ++G + G +E+
Sbjct: 410 NLWVVGHTESQTDYCAVQFSKDHTSSDLWQFEGELQVYTPDGALLR---TVGRQQG-MEY 465
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
P Y +V V+VSD +H V ++ +++ FG EG +GQL P GV DD G I
Sbjct: 466 PQYASVDREGNVLVSDFKDHYVYKYNEREQLLVKFGGEGKGQGQLSNPCGVCSDDSGNII 525
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V DSGN R+++F G F+R + VA+ + G ++V D E++ + V
Sbjct: 526 VADSGNGRVEMFDKRGVFVRHVAMGMTRPC------AVAMATAGQLVVTDTEDNTVSVI 578
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 35/209 (16%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G + G+ + P +AVS ++ V+D N R+Q F + DG FV KF +
Sbjct: 341 FGGKGAEEGKFDRPRGVAVSEEGQIFVADYINARIQAFTI-------DGMFVNKFPTT-T 392
Query: 194 KAGQLEHPHYIAV-------------SNTNRVIVSDSNNH----------RVQIFDVNGR 230
GQ P+ +A+ S T+ V S +H +Q++ +G
Sbjct: 393 SGGQKIFPYDVAMDGEGNLWVVGHTESQTDYCAVQFSKDHTSSDLWQFEGELQVYTPDGA 452
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
++ + G + +++P+ +VD +G + V D ++ + + Q L FG G G G
Sbjct: 453 LLRTVGRQQG----MEYPQYASVDREGNVLVSDFKDHYVYKYNEREQLLVKFGGEGKGQG 508
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ GV +GNI+V D N R+++F
Sbjct: 509 QLSNPCGVCSDDSGNIIVADSGNGRVEMF 537
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+ +FG +G+EEG+ PRGVAV ++G I V D N RIQ FT DG F+ F SG G
Sbjct: 337 MAVTFGGKGAEEGKFDRPRGVAVSEEGQIFVADYINARIQAFTIDGMFVNKFPTTTSG-G 395
Query: 291 EFKGLEGVAVMSNGNILV 308
+ VA+ GN+ V
Sbjct: 396 QKIFPYDVAMDGEGNLWV 413
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 34 QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV 93
+Y ++ +L K G G G + P G+ +I+VADS N RV++ F + V
Sbjct: 489 KYNEREQLLVKFGGEGKGQGQLSNPCGVCSDDSGNIIVADSGNGRVEM-FDKRGVFVRHV 547
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ T P +A+ +VV D+ ++ V V Q
Sbjct: 548 AMGMTRPCAVAMATAGQLVVTDTEDNTVSVIQ 579
>gi|260809861|ref|XP_002599723.1| hypothetical protein BRAFLDRAFT_249727 [Branchiostoma floridae]
gi|229285004|gb|EEN55735.1| hypothetical protein BRAFLDRAFT_249727 [Branchiostoma floridae]
Length = 681
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 142/301 (47%), Gaps = 33/301 (10%)
Query: 26 QVGTTP-RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP 84
QVG +P Q K IG +G G P G+AV D +I V + N RVQV
Sbjct: 404 QVGGSPFDVQVHGKETPALTIGQKGRGVGELNGPLGVAVDKDGNIAVVERGNKRVQV--- 460
Query: 85 HFDLKTNCVFLAFTWPRGIAVGPDNS-----IVVADSSNHRVQVFQSDGTFVGKFGSMGN 139
FD + F A G D +V + N+ ++ + +G + F
Sbjct: 461 -FDGRRGRSLSTFAVEGEKAFGIDVDSNGMFLVTSWGKNYGIRRYSKEGKLLNTF----- 514
Query: 140 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE 199
+ ++HP +AV R++V+D+ + Q DG+ + + G GQL
Sbjct: 515 QPDCMKHPLGVAVLQDGRMVVADNKQKSCLLL-------QPDGSLIREIGK-----GQLR 562
Query: 200 HPHYIAVSNTNRVI-VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
P++++V + V+ V+D++ H+V F++ G+++ FG +G +G++K P V VD G
Sbjct: 563 SPYFVSVDESRDVLFVTDNSAHKVFAFNLGGKLMFDFGKQGDNDGEMKNPHCVRVDPAGN 622
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
+ VG++G+ R+Q+F DG F + G G+A+ +GNI+V H +++
Sbjct: 623 VIVGNAGDGRVQVFGHDGTFTQKIATVEDGYA-----TGIALTHDGNIVVACFHGHCMEL 677
Query: 319 F 319
+
Sbjct: 678 Y 678
>gi|291222287|ref|XP_002731151.1| PREDICTED: tripartite motif-containing 2-like [Saccoglossus
kowalevskii]
Length = 286
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 130/272 (47%), Gaps = 23/272 (8%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---WPRGIAVGPDN 109
G P G+AV +N I+VADS N R V H + ++ +F A P +A G +
Sbjct: 25 GHLKRPMGVAVIDNNEILVADSGNARTCVLSEHGEFRSMVMFKALKGTFTPFDVAAGRNG 84
Query: 110 SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 169
++ D N+R V+ DG V FG L P I+++ NRV+V DS+ V+
Sbjct: 85 QLLATDQGNNRAYVYMDDGNLVRLFG-----GDDLHKPCGISLTVDNRVLVVDSDAACVR 139
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
I+ N DG ++ FG G GQ P +I + ++IVSD + +Q+FD +G
Sbjct: 140 IYAYN------DGRYIKSFGKRGYGPGQFITPQFITTNGRKQIIVSDYRHDSLQVFDNDG 193
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
I +GS G++ P GV D + I V D+ +++ + G G + +
Sbjct: 194 NFIKCI--KGS--GEVWRPMGVTCDREDNIYVCDAFQYKVRKY---GATFEPLGSLTAAE 246
Query: 290 GEFKGLEGVAVMSNG--NILVCDRENHRIQVF 319
GE G G+AV + ++V D N+ +++F
Sbjct: 247 GELMGPHGLAVTNEEKQKLVVGDCGNNCVKLF 278
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 14/136 (10%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----AFTW-P 100
G RG PG F P+ I I+V+D + +QV FD N + W P
Sbjct: 153 GKRGYGPGQFITPQFITTNGRKQIIVSDYRHDSLQV----FDNDGNFIKCIKGSGEVWRP 208
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN--RV 158
G+ +++I V D+ ++V+ + G GS+ G+L PH +AV+N ++
Sbjct: 209 MGVTCDREDNIYVCDAFQYKVRKY---GATFEPLGSLTAAEGELMGPHGLAVTNEEKQKL 265
Query: 159 IVSDSNNHRVQIFDVN 174
+V D N+ V++F+++
Sbjct: 266 VVGDCGNNCVKLFNMD 281
>gi|405953509|gb|EKC21159.1| Tripartite motif-containing protein 71 [Crassostrea gigas]
Length = 696
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 143/285 (50%), Gaps = 23/285 (8%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+L IG +G++ + P GI D +VVA++ N R+Q+ + + V L
Sbjct: 420 KLLCHIGGKGTKQYQLSLPYGITFSADEKLVVAENGNGRIQM-YTKEGVFLKMVPLPRCC 478
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ--LEHPHYIAVSNTNR 157
PR +++ D +V D + +++ + TF + S+ N+ + + P +A R
Sbjct: 479 PRSLSLLKDQKVVFTDENEKCLKIINLE-TF--EISSITNRYTERTVSFPFGVASLCDGR 535
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++SD V + G + + G + + ++P Y+A + + + VSDS
Sbjct: 536 FVISDMIYETVTLTSSTGVIEKQLGE--------EDPSNVYDNPSYLATDSEDNIFVSDS 587
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
NH++++++ G + FG++G +EGQL++P+G+AVD+ G I V D+GN+R+ +F+ G
Sbjct: 588 GNHKIKVYNKYGMFLFQFGNDGVKEGQLRYPKGIAVDNNGLIYVADAGNDRVVVFSRLGF 647
Query: 278 FLRAFGCWGSGDGEFKGLE---GVAVMSNGNILVCDRENHRIQVF 319
FL D ++ G+E G+A G + V + H I V+
Sbjct: 648 FLSVL-----VDRKY-GIERPTGLAYSPTGLLAVSMPDKHEIFVY 686
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 74/137 (54%), Gaps = 12/137 (8%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A +++I V+DS NH+++V+ G F+ +FG+ G K GQL +P IAV N +
Sbjct: 571 PSYLATDSEDNIFVSDSGNHKIKVYNKYGMFLFQFGNDGVKEGQLRYPKGIAVDNNGLIY 630
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGS-MGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
V+D+ N RV +F + +G F S + ++ +E P +A S T + VS +
Sbjct: 631 VADAGNDRVVVF-----------SRLGFFLSVLVDRKYGIERPTGLAYSPTGLLAVSMPD 679
Query: 219 NHRVQIFDVNGRVITSF 235
H + ++ ++ + + F
Sbjct: 680 KHEIFVYQLDNSIPSQF 696
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF---LAFTW 99
F+ G+ G + G +P+GIAV + I VAD+ N RV V F + +
Sbjct: 603 FQFGNDGVKEGQLRYPKGIAVDNNGLIYVADAGNDRV-VVFSRLGFFLSVLVDRKYGIER 661
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKF 134
P G+A P + V+ H + V+Q D + +F
Sbjct: 662 PTGLAYSPTGLLAVSMPDKHEIFVYQLDNSIPSQF 696
>gi|326321772|gb|ADZ53886.1| tripartite motif-containing protein 71 [Tursiops truncatus]
Length = 250
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 111/215 (51%), Gaps = 16/215 (7%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 52 VVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI--- 96
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R+
Sbjct: 97 -ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRI 155
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL F
Sbjct: 156 QVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDTSRRIVVADKDNHRIQIFTFEGQFLLNF 215
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
G+ +G+F VAV S G ILV D +H IQ
Sbjct: 216 CENGTKNGQFNYPWDVAVNSEGKILVSDTRDHPIQ 250
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 78/124 (62%), Gaps = 7/124 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G++V + IVVAD SN+R+QVF+ G F KFG++G++ GQ + P +A + R++
Sbjct: 134 PWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDTSRRIV 193
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHR+QIF G+ F+ F G K GQ +P +AV++ +++VSD+ +
Sbjct: 194 VADKDNHRIQIFTFEGQ-------FLLNFCENGTKNGQFNYPWDVAVNSEGKILVSDTRD 246
Query: 220 HRVQ 223
H +Q
Sbjct: 247 HPIQ 250
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 81/148 (54%), Gaps = 17/148 (11%)
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT----- 233
Q +GT+V + QLE H ++V+ N+ I N ++ +GR
Sbjct: 68 QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI----ENSPFKVVVKSGRSYVGIGLP 117
Query: 234 --SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
SFGSEG +G+L P GV+VD +GYI V D NNRIQ+F P G F FG GS G+
Sbjct: 118 GLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQ 177
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F GVA ++ I+V D++NHRIQ+F
Sbjct: 178 FDRPAGVACDTSRRIVVADKDNHRIQIF 205
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
GS G G P G++V + IVVAD SN+R+QV P L F
Sbjct: 119 LSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 178
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+A IVVAD NHR+Q+F +G F+ F G K GQ +P +AV++ +
Sbjct: 179 DRPAGVACDTSRRIVVADKDNHRIQIFTFEGQFLLNFCENGTKNGQFNYPWDVAVNSEGK 238
Query: 158 VIVSDSNNHRVQ 169
++VSD+ +H +Q
Sbjct: 239 ILVSDTRDHPIQ 250
>gi|260792734|ref|XP_002591369.1| hypothetical protein BRAFLDRAFT_227369 [Branchiostoma floridae]
gi|229276574|gb|EEN47380.1| hypothetical protein BRAFLDRAFT_227369 [Branchiostoma floridae]
Length = 698
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 36/278 (12%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT----NCVFLAFT 98
IG G G F++P +AV D +I V++ N RVQ+ FD +T C +
Sbjct: 431 LTIGRAGRGEGEFSFPSDVAVDMDGNIAVSEWGNKRVQM----FDARTGQSLRCFPVDCE 486
Query: 99 WPRGIAVGPDNSIVVA-------DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
RGI + + ++ + N +QV+ G K L P +A
Sbjct: 487 CARGIDMDSNGQFILTFENRYYGTTGNQAIQVYSRKGKLTKTL-----KHDCLRDPIGVA 541
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V R++V+D + Q DG+ + G GQL++P +IAV +
Sbjct: 542 VLQDGRMVVTDYTQKSCLL-------LQPDGSLIRDIGK-----GQLQNPLFIAVDESRD 589
Query: 212 V-IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
+ V+D H+V +FD+ G++ SFG G +G+L++P G+ VD G I V + N R+Q
Sbjct: 590 LFFVTDCWAHKVFVFDLEGKLKFSFGKTGFNDGELEYPTGITVDPAGNIIVVNRDNRRLQ 649
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
+F PDG +LR G + + G+A+ + +I V
Sbjct: 650 VFGPDGTYLRTVATVKGG---YPLVVGIALTPDNHIAV 684
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 43/233 (18%)
Query: 125 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN---------- 174
+S T V G G G+ P +AV + VS+ N RVQ+FD
Sbjct: 424 KSRDTPVLTIGRAGRGEGEFSFPSDVAVDMDGNIAVSEWGNKRVQMFDARTGQSLRCFPV 483
Query: 175 ------GRVFQSDGTFVGKF-----GSMGNKAGQ----------------LEHPHYIAVS 207
G S+G F+ F G+ GN+A Q L P +AV
Sbjct: 484 DCECARGIDMDSNGQFILTFENRYYGTTGNQAIQVYSRKGKLTKTLKHDCLRDPIGVAVL 543
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGN 266
R++V+D + +G +I G +GQL+ P +AVD+ + V D
Sbjct: 544 QDGRMVVTDYTQKSCLLLQPDGSLIRDIG-----KGQLQNPLFIAVDESRDLFFVTDCWA 598
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+++ +F +G+ +FG G DGE + G+ V GNI+V +R+N R+QVF
Sbjct: 599 HKVFVFDLEGKLKFSFGKTGFNDGELEYPTGITVDPAGNIIVVNRDNRRLQVF 651
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+L+F G G G +P GI V P +I+V + N R+QV P + +
Sbjct: 609 KLKFSFGKTGFNDGELEYPTGITVDPAGNIIVVNRDNRRLQVFGPDGTYLRTVATVKGGY 668
Query: 100 PR--GIAVGPDNSIVVADSSNHRVQVFQ 125
P GIA+ PDN I VA + V++++
Sbjct: 669 PLVVGIALTPDNHIAVACYMGNCVELYR 696
>gi|404497748|ref|YP_006721854.1| NHL repeat domain-containing protein [Geobacter metallireducens
GS-15]
gi|418066190|ref|ZP_12703556.1| NHL repeat containing protein [Geobacter metallireducens RCH3]
gi|78195348|gb|ABB33115.1| NHL repeat domain lipoprotein [Geobacter metallireducens GS-15]
gi|373560865|gb|EHP87114.1| NHL repeat containing protein [Geobacter metallireducens RCH3]
Length = 363
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 107/210 (50%), Gaps = 13/210 (6%)
Query: 111 IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
+ V D V VF + FG +A ++E P IA+ R+ VSD+ +
Sbjct: 92 VYVGDPGAPGVYVFDFVNNIMRPFGKAEAEA-RIEQPVGIAIDENGRIYVSDTKKAAIM- 149
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR-VIVSDSNNHRVQIFDVNG 229
VF D T ++ N G +E IA + ++ D H+V + + G
Sbjct: 150 ------VFHQDETP----AALINLKGMVEKIGDIAYDRIGKHLLALDVRGHKVLVLSLRG 199
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+++SFG+ G++ G+ FP + V+++G I V D+ N RIQIF+ DG+FLR FG G
Sbjct: 200 ELLSSFGNRGTKPGEFNFPSALTVNNKGEIIVADAMNARIQIFSSDGKFLRMFGQRGDSP 259
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G + ++GVAV S+ NI V D + H+ ++F
Sbjct: 260 GTLQLIKGVAVDSDDNIYVTDGKGHKFEIF 289
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 19/228 (8%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR-V 158
P GIA+ + I V+D+ + VF D T ++ N G +E IA + +
Sbjct: 127 PVGIAIDENGRIYVSDTKKAAIMVFHQDETP----AALINLKGMVEKIGDIAYDRIGKHL 182
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+ D H+V + + G + S FG+ G K G+ P + V+N +IV+D+
Sbjct: 183 LALDVRGHKVLVLSLRGELLSS-------FGNRGTKPGEFNFPSALTVNNKGEIIVADAM 235
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
N R+QIF +G+ + FG G G L+ +GVAVD I V D ++ +IF+ G +
Sbjct: 236 NARIQIFSSDGKFLRMFGQRGDSPGTLQLIKGVAVDSDDNIYVTDGKGHKFEIFSTTGDY 295
Query: 279 LR----AFGCWGSGD---GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L AF +G G F +G+ + + I V D+ N R QVF
Sbjct: 296 LLTVGGAFSALTTGKTAPGGFVIPQGIDIDKDNMIYVVDQLNRRFQVF 343
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F +P + V I+VAD+ N R+Q+F SDG F+ FG G+ G L+ +AV + +
Sbjct: 215 FNFPSALTVNNKGEIIVADAMNARIQIFSSDGKFLRMFGQRGDSPGTLQLIKGVAVDSDD 274
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ V+D H+ +IF G + G + G P I + N + V D
Sbjct: 275 NIYVTDGKGHKFEIFSTTGDYLLTVGGAFSALTTGKTAPGGFVIPQGIDIDKDNMIYVVD 334
Query: 217 SNNHRVQIF 225
N R Q+F
Sbjct: 335 QLNRRFQVF 343
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 24/144 (16%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------- 95
G+RG++PG F +P + V I+VAD+ N R+Q+ ++ FL
Sbjct: 206 GNRGTKPGEFNFPSALTVNNKGEIIVADAMNARIQI------FSSDGKFLRMFGQRGDSP 259
Query: 96 -AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV----GKFGSM--GNKA-GQLEHP 147
+G+AV D++I V D H+ ++F + G ++ G F ++ G A G P
Sbjct: 260 GTLQLIKGVAVDSDDNIYVTDGKGHKFEIFSTTGDYLLTVGGAFSALTTGKTAPGGFVIP 319
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIF 171
I + N + V D N R Q+F
Sbjct: 320 QGIDIDKDNMIYVVDQLNRRFQVF 343
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 61/166 (36%), Gaps = 45/166 (27%)
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
L P + +V V D V +FD ++ FG + E +++ P G+A+D+ G
Sbjct: 78 LSKPITVRSDGRGKVYVGDPGAPGVYVFDFVNNIMRPFG-KAEAEARIEQPVGIAIDENG 136
Query: 258 YISVGDSGNNRIQIFTPD------------------------------------------ 275
I V D+ I +F D
Sbjct: 137 RIYVSDTKKAAIMVFHQDETPAALINLKGMVEKIGDIAYDRIGKHLLALDVRGHKVLVLS 196
Query: 276 --GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ L +FG G+ GEF + V + G I+V D N RIQ+F
Sbjct: 197 LRGELLSSFGNRGTKPGEFNFPSALTVNNKGEIIVADAMNARIQIF 242
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 12/92 (13%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD--LKTNCVFLA------- 96
G RG PG +G+AV D++I V D H+ ++ D L F A
Sbjct: 253 GQRGDSPGTLQLIKGVAVDSDDNIYVTDGKGHKFEIFSTTGDYLLTVGGAFSALTTGKTA 312
Query: 97 ---FTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
F P+GI + DN I V D N R QVF+
Sbjct: 313 PGGFVIPQGIDIDKDNMIYVVDQLNRRFQVFR 344
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 239 GSEEG-QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
G EEG L P V D +G + VGD G + +F +R FG + + G
Sbjct: 71 GEEEGISLSKPITVRSDGRGKVYVGDPGAPGVYVFDFVNNIMRPFGK-AEAEARIEQPVG 129
Query: 298 VAVMSNGNILVCDRENHRIQVF 319
+A+ NG I V D + I VF
Sbjct: 130 IAIDENGRIYVSDTKKAAIMVF 151
>gi|34533260|dbj|BAC86643.1| unnamed protein product [Homo sapiens]
Length = 566
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 103/192 (53%), Gaps = 12/192 (6%)
Query: 127 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVG 186
+ V + GS G + G+ + ++ +++ R++V+DSNN +Q VF ++G F
Sbjct: 307 EDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQ-------VFSNEGQFKF 359
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
+FG G GQL+ P +AV +IV+D +N V IF G+ T G+ G+L
Sbjct: 360 RFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGA-----GRLM 414
Query: 247 FPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNI 306
P+GVAVD G+I V D+ + + F P+G+ + FG G+ D F G VAV + I
Sbjct: 415 GPKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVSNKNEI 474
Query: 307 LVCDRENHRIQV 318
+V D NH ++V
Sbjct: 475 VVTDFHNHSVKV 486
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 95/193 (49%), Gaps = 25/193 (12%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L F++GSRG E G FT +G++ IVVADS+N +QV F + F
Sbjct: 310 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQV----FSNEGQFKFRFGVRG 365
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P G+AV + I+VAD N V +F +G F K G AG+L P +A
Sbjct: 366 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVA 420
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V +IV D N +F FQ +G VG+FG G PH++AVSN N
Sbjct: 421 VDRNGHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVSNKNE 473
Query: 212 VIVSDSNNHRVQI 224
++V+D +NH V++
Sbjct: 474 IVVTDFHNHSVKV 486
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 91/180 (50%), Gaps = 14/180 (7%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT +G++ IVVADS+N +QVF ++G F +FG G GQL+ P +AV
Sbjct: 324 FTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTNG 383
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+IV+D +N V IF +G F K G AG+L P +AV +IV D
Sbjct: 384 DIIVADYDNRWVSIFS-------PEGKFKTKIG-----AGRLMGPKGVAVDRNGHIIVVD 431
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN--RIQIFTP 274
+ + V F NG+++ FG G+ + P VAV ++ I V D N+ ++ +F P
Sbjct: 432 NKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVSNKNEIVVTDFHNHSVKVSVFPP 491
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 70/131 (53%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 356 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 415
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AVSN N ++
Sbjct: 416 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVSNKNEIV 475
Query: 160 VSDSNNHRVQI 170
V+D +NH V++
Sbjct: 476 VTDFHNHSVKV 486
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 306 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 365
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 366 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 398
>gi|260785742|ref|XP_002587919.1| hypothetical protein BRAFLDRAFT_87307 [Branchiostoma floridae]
gi|229273074|gb|EEN43930.1| hypothetical protein BRAFLDRAFT_87307 [Branchiostoma floridae]
Length = 835
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 62/268 (23%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS--- 153
F PRG+ + P N I VAD +N RVQV ++G ++ F ++ G+ PH + +
Sbjct: 582 FRLPRGVVLSPSNEIFVADYNNRRVQVHSTEGVYLHHFPTVVPGTGKDMQPHDVCMDGNG 641
Query: 154 ------------------------------------------NTNRVIVSDSNNHRVQIF 171
TN ++V+D++ VQ
Sbjct: 642 TLWVVRRGETAHHVVQYSTDGTVMAGFDLEKIGYFRGIAVDMRTNDILVTDADQGAVQ-- 699
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
VF+ DG+ V ++ + G++ P Y+ V ++VSD +N+ V ++D +G+
Sbjct: 700 -----VFRPDGSLVR---TVRHPLGEMLRPWYVTVDGEGNILVSDWDNNFVYVYDESGKF 751
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ FG GS + QLK P G+ D G+I V D GN R+QIFT G+F+R
Sbjct: 752 LFQFGGGGSGKVQLKRPAGICTDSSGHILVADYGNERVQIFTRHGEFVRTVRTG------ 805
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
FK EG+AV G ++V N + V+
Sbjct: 806 FKP-EGLAVGPEGQLVVTSYLNDMVTVY 832
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 102/232 (43%), Gaps = 57/232 (24%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI----------------------- 170
FG G++ G+ P + +S +N + V+D NN RVQ+
Sbjct: 572 FGGEGSEPGKFRLPRGVVLSPSNEIFVADYNNRRVQVHSTEGVYLHHFPTVVPGTGKDMQ 631
Query: 171 -----FDVNGRV--------------FQSDGTFVGKFGSMGNKAGQLEHPHY---IAVS- 207
D NG + + +DGT + F LE Y IAV
Sbjct: 632 PHDVCMDGNGTLWVVRRGETAHHVVQYSTDGTVMAGF--------DLEKIGYFRGIAVDM 683
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
TN ++V+D++ VQ+F +G ++ + G++ P V VD +G I V D NN
Sbjct: 684 RTNDILVTDADQGAVQVFRPDGSLVRTVRHPL---GEMLRPWYVTVDGEGNILVSDWDNN 740
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ ++ G+FL FG GSG + K G+ S+G+ILV D N R+Q+F
Sbjct: 741 FVYVYDESGKFLFQFGGGGSGKVQLKRPAGICTDSSGHILVADYGNERVQIF 792
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ +FG EGSE G+ + PRGV + I V D N R+Q+ + +G +L F G G+
Sbjct: 569 VITFGGEGSEPGKFRLPRGVVLSPSNEIFVADYNNRRVQVHSTEGVYLHHFPTVVPGTGK 628
Query: 292 FKGLEGVAVMSNGNILVCDR 311
V + NG + V R
Sbjct: 629 DMQPHDVCMDGNGTLWVVRR 648
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G GS P GI I+VAD N RVQ+ H + V
Sbjct: 745 YDESGKFLFQFGGGGSGKVQLKRPAGICTDSSGHILVADYGNERVQIFTRHGEF-VRTVR 803
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
F P G+AVGP+ +VV N V V+ S
Sbjct: 804 TGFK-PEGLAVGPEGQLVVTSYLNDMVTVYPS 834
>gi|291221736|ref|XP_002730877.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 723
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 133/273 (48%), Gaps = 25/273 (9%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-----AFTWPRGIAVGP 107
G P G+A+ V AD SN RV + + K + F FT P +A+
Sbjct: 468 GQLKGPHGLAINKHGDFVTADRSNRRVVIHDRDGNFKQSFEFTDQFAKPFT-PCDVAISD 526
Query: 108 DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNH 166
DN + D + ++ V +G + KFGS +++ P IA++ TN V VS+ +
Sbjct: 527 DNEYFITDDNKKQIVVSDENGRIITKFGS-----SEIDDPLGIAINPITNNVYVSEYSEG 581
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
++ + GR ++ G GNK G+L P +A+++ V V+D NN R+Q+F+
Sbjct: 582 YIRKYTQGGR-------YINSLGIQGNKQGELNRPCILAINSKGMVYVADRNNQRIQVFN 634
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ + + F + G + +++P GVA+D Y+ V S +++ + GQF+ C
Sbjct: 635 SDDQFMFEFSTTGDNDT-MEYPVGVAIDKNNYVYV--SSRHKVTKYDSYGQFICRIDCDN 691
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G +GVAV ++G I V D +N I+VF
Sbjct: 692 DG---LSRPQGVAVCNDGKIAVVDFDNKCIKVF 721
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Query: 34 QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH----FDLK 89
+Y Q R +G +G++ G P +A+ + VAD +N R+QV F+
Sbjct: 585 KYTQGGRYINSLGIQGNKQGELNRPCILAINSKGMVYVADRNNQRIQVFNSDDQFMFEFS 644
Query: 90 TNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
T +P G+A+ +N + V SS H+V + S G F+ + + L P
Sbjct: 645 TTGDNDTMEYPVGVAIDKNNYVYV--SSRHKVTKYDSYGQFICRIDCDNDG---LSRPQG 699
Query: 150 IAVSNTNRVIVSDSNNHRVQIF 171
+AV N ++ V D +N +++F
Sbjct: 700 VAVCNDGKIAVVDFDNKCIKVF 721
>gi|260795691|ref|XP_002592838.1| hypothetical protein BRAFLDRAFT_201537 [Branchiostoma floridae]
gi|229278062|gb|EEN48849.1| hypothetical protein BRAFLDRAFT_201537 [Branchiostoma floridae]
Length = 683
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 34/290 (11%)
Query: 38 KRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF 97
K IG +GS G WP G+A+ + +IVV D N RVQ+ FD +T F
Sbjct: 417 KETPALTIGRKGSGEGELIWPLGVAIDKEGNIVVVDKGNKRVQL----FDAETGQCLRTF 472
Query: 98 T----WPRGIAVGPDNSIVVAD-SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
P G+ V + +V ++ ++ + +G + F + PH +A+
Sbjct: 473 AVESEKPFGVGVESNGVFLVTSWGKDYGLRRYSREGELLNTFNP-----DWMNGPHGLAI 527
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT-NR 211
+ R++V+D H + Q DG+ + + G G L P+++AV + +
Sbjct: 528 LHDGRMVVADHAQHSCLLL-------QPDGSLIREIGK-----GTLHTPYFVAVDESRDA 575
Query: 212 VIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
+ V+D + ++ +FD+NG FG + ++ + P G+A+D G I VG++ + R+
Sbjct: 576 MYVADRSQSAPKIVVFDLNGSFKFDFGIQCDDDEVCQKPGGLALDPAGNIIVGNAEDGRV 635
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
Q+F PDG F+R G+ GE+ G+A+ +G I V R+ I+++
Sbjct: 636 QVFRPDGTFIRTV---GTVKGEYAS--GLALTPDGYIAVACRQGDCIELY 680
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 9/87 (10%)
Query: 225 FDVNGRVITSF--GSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD-GQFLRA 281
F V+G+ + G +GS EG+L +P GVA+D +G I V D GN R+Q+F + GQ LR
Sbjct: 412 FTVHGKETPALTIGRKGSGEGELIWPLGVAIDKEGNIVVVDKGNKRVQLFDAETGQCLRT 471
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILV 308
F E + GV V SNG LV
Sbjct: 472 FAV------ESEKPFGVGVESNGVFLV 492
>gi|260799391|ref|XP_002594680.1| hypothetical protein BRAFLDRAFT_246644 [Branchiostoma floridae]
gi|229279916|gb|EEN50691.1| hypothetical protein BRAFLDRAFT_246644 [Branchiostoma floridae]
Length = 235
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 104/188 (55%), Gaps = 13/188 (6%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
KFG G+ G+ + PH + VS V VSD N R+Q F++ G TF+ +F ++
Sbjct: 13 KFGGRGSDKGKFDRPHGLTVSKDGLVFVSDYGNERIQSFNLQG-------TFLHQFPTV- 64
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
++E P YI ++ + V+ N V ++ +G +++ FG EGS EG+LK+P G+
Sbjct: 65 ----EMERPQYININKGGHIFVTHFMNSCVYVYREDGHLLSVFGGEGSGEGELKYPGGIC 120
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFLR-AFGCWGSGDGEFKGLEGVAVMSNGNILVCDR 311
+ G I V D GN + ++ G FLR FG +GSGDG+ G+ + GN++V DR
Sbjct: 121 TNTSGNIIVADKGNKNVVVYDKTGNFLRYKFGRFGSGDGQLDSPYGICLDMKGNVIVVDR 180
Query: 312 ENHRIQVF 319
N R+ VF
Sbjct: 181 GNWRVSVF 188
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 97/185 (52%), Gaps = 13/185 (7%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G+ V D + V+D N R+Q F GTF+ +F ++ ++E P YI ++
Sbjct: 24 FDRPHGLTVSKDGLVFVSDYGNERIQSFNLQGTFLHQFPTV-----EMERPQYININKGG 78
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ V+ N V V++ DG + FG G+ G+L++P I + + +IV+D
Sbjct: 79 HIFVTHFMNSCVY-------VYREDGHLLSVFGGEGSGEGELKYPGGICTNTSGNIIVAD 131
Query: 217 SNNHRVQIFDVNGRVI-TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
N V ++D G + FG GS +GQL P G+ +D +G + V D GN R+ +F +
Sbjct: 132 KGNKNVVVYDKTGNFLRYKFGRFGSGDGQLDSPYGICLDMKGNVIVVDRGNWRVSVFDSE 191
Query: 276 GQFLR 280
G+F+R
Sbjct: 192 GKFVR 196
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 14/193 (7%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF----LAFTW 99
K G RGS+ G F P G+ V D + V+D N R+Q F+L+ + +
Sbjct: 13 KFGGRGSDKGKFDRPHGLTVSKDGLVFVSDYGNERIQ----SFNLQGTFLHQFPTVEMER 68
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+ I + I V N V V++ DG + FG G+ G+L++P I + + +I
Sbjct: 69 PQYININKGGHIFVTHFMNSCVYVYREDGHLLSVFGGEGSGEGELKYPGGICTNTSGNII 128
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D N V ++D G + KFG G+ GQL+ P+ I + VIV D N
Sbjct: 129 VADKGNKNVVVYDKTGNFLRY------KFGRFGSGDGQLDSPYGICLDMKGNVIVVDRGN 182
Query: 220 HRVQIFDVNGRVI 232
RV +FD G+ +
Sbjct: 183 WRVSVFDSEGKFV 195
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
I FG GS++G+ P G+ V G + V D GN RIQ F G FL F
Sbjct: 11 IVKFGGRGSDKGKFDRPHGLTVSKDGLVFVSDYGNERIQSFNLQGTFLHQF 61
>gi|260785790|ref|XP_002587943.1| hypothetical protein BRAFLDRAFT_87331 [Branchiostoma floridae]
gi|229273098|gb|EEN43954.1| hypothetical protein BRAFLDRAFT_87331 [Branchiostoma floridae]
Length = 931
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 119/269 (44%), Gaps = 62/269 (23%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM----GNKA----------- 141
F +PRG+ V P N I V D N RVQV+ ++G ++ F ++ G+K
Sbjct: 676 FRYPRGVVVSPSNEIFVTDMHNRRVQVYSTEGFYLRHFPTVVPGTGDKVMGPHDVCMDGN 735
Query: 142 ------GQLEHPHYIAVSNT-------------------------NRVIVSDSNNHRVQI 170
G+ E H++ +T N ++V+D++ V
Sbjct: 736 GTLWVVGRGETAHHVVQYSTDGTAMARFDLGIGIYFHGIAMDIRSNHILVTDADQDEVH- 794
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VF+ DG V +AG++ P Y+ V ++VSD + H V ++D +G+
Sbjct: 795 ------VFRPDGALVRTVRH--PRAGEMTRPGYVTVDGEGNILVSDWDTHCVYVYDESGK 846
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+ FG GS EGQL P G+ D G+I V D N R+QIFT G+F+R
Sbjct: 847 FLFQFGGYGSGEGQLWNPAGICTDSSGHILVADRENYRVQIFTRHGEFVRTVRTGPVP-- 904
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+AV ++V D +NH + V+
Sbjct: 905 -----RGLAVGPEEQLVVTDWDNHTVTVY 928
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD----LKT 90
Y + + F+ G GS G P GI I+VAD N+RVQ+ H + ++T
Sbjct: 841 YDESGKFLFQFGGYGSGEGQLWNPAGICTDSSGHILVADRENYRVQIFTRHGEFVRTVRT 900
Query: 91 NCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
V PRG+AVGP+ +VV D NH V V+ S
Sbjct: 901 GPV------PRGLAVGPEEQLVVTDWDNHTVTVYPS 930
>gi|253701755|ref|YP_003022944.1| NHL repeat containing protein [Geobacter sp. M21]
gi|251776605|gb|ACT19186.1| NHL repeat containing protein [Geobacter sp. M21]
Length = 372
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 92/177 (51%), Gaps = 8/177 (4%)
Query: 144 LEHPHYIAVSNTNRVI-VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
L P I + +NR++ ++D+ H+V +FD+ G + + GS G+ AG +P
Sbjct: 180 LARPTGIVFNKSNRLLYITDTTEHQVVVFDLKGNLRY-------RIGSRGSAAGHFNYPT 232
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
I V N+ R+ V+D+ N R+ IF G + SFG G G L +GVAVD G I +
Sbjct: 233 DINVDNSGRLYVTDALNSRISIFSAEGTHLNSFGRSGDTAGNLPKAKGVAVDSAGNIYIV 292
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D+ + +QIF G L FG G+ GEF G+ + N I V D N RIQVF
Sbjct: 293 DALLDAVQIFDQSGVLLLTFGSNGTNAGEFWMPSGIYIDRNDYIYVSDSYNRRIQVF 349
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 21/178 (11%)
Query: 58 PRGIAVGPDNSIV-VADSSNHRVQVCFPHFDLKTNCVFLA---------FTWPRGIAVGP 107
P GI N ++ + D++ H+V V FDLK N + F +P I V
Sbjct: 183 PTGIVFNKSNRLLYITDTTEHQVVV----FDLKGNLRYRIGSRGSAAGHFNYPTDINVDN 238
Query: 108 DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 167
+ V D+ N R+ +F ++GT + FG G+ AG L +AV + + + D+
Sbjct: 239 SGRLYVTDALNSRISIFSAEGTHLNSFGRSGDTAGNLPKAKGVAVDSAGNIYIVDALLDA 298
Query: 168 VQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
VQIFD G + FGS G AG+ P I + + + VSDS N R+Q+F
Sbjct: 299 VQIFD-------QSGVLLLTFGSNGTNAGEFWMPSGIYIDRNDYIYVSDSYNRRIQVF 349
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 38 KRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP---HFDLKTNCVF 94
K L+++IGSRGS G F +P I V + V D+ N R+ + H +
Sbjct: 211 KGNLRYRIGSRGSAAGHFNYPTDINVDNSGRLYVTDALNSRISIFSAEGTHLNSFGRSGD 270
Query: 95 LAFTWP--RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
A P +G+AV +I + D+ VQ+F G + FGS G AG+ P I +
Sbjct: 271 TAGNLPKAKGVAVDSAGNIYIVDALLDAVQIFDQSGVLLLTFGSNGTNAGEFWMPSGIYI 330
Query: 153 SNTNRVIVSDSNNHRVQIF 171
+ + VSDS N R+Q+F
Sbjct: 331 DRNDYIYVSDSYNRRIQVF 349
>gi|161528555|ref|YP_001582381.1| fibronectin type III domain-containing protein [Nitrosopumilus
maritimus SCM1]
gi|160339856|gb|ABX12943.1| Fibronectin type III domain protein [Nitrosopumilus maritimus SCM1]
Length = 903
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 154/344 (44%), Gaps = 78/344 (22%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPD-NSIVVADSSNHRVQVCFPHFDLKTNCVFL--- 95
FK G+ GS+ P + V + I V D++N+R+ V FD + FL
Sbjct: 13 EFSFKFGTLGSDDDELDNPTDVIVKSNGREIYVVDNNNNRINV----FDDDGDADFLYGT 68
Query: 96 -----------------------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVG 132
F P IA+ V DS N RVQVF DG F
Sbjct: 69 FCNVAQIQDCNDNADGAEEDGDGQFNTPLYIAMDALGKFFVVDSENERVQVFDDDGEFQF 128
Query: 133 KFGSMGNKAGQLEH---PHYIAVSNTNR-VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKF 188
K GS + +G E+ + + +++R + VS++ N + VF S G F+ F
Sbjct: 129 KLGS--SDSGDDEYLGGAQGVTIQDSSRKIFVSNTENDSI-------SVFGSTGNFLFDF 179
Query: 189 GSMGNKAGQLEHPHYIAVSNTNRVI-VSDSNNHRVQIFDV-------NGRV--------I 232
S N +P + + N+N ++ V+DS N R+ IF++ +G + +
Sbjct: 180 DSF-NGNDDFTNPSEMIIDNSNDLLYVADSGNDRIVIFEIVDGTTCPDGTIESVDGICYV 238
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQG-YISVGDSGNNRIQIFT-------PDGQ------- 277
FGS G +EG+ P G+A++ + + V DS N+RIQIF PDG
Sbjct: 239 KEFGSSGDDEGEFDDPSGLALNSENDLLYVSDSDNDRIQIFEIVDGTTCPDGTDEIIDGV 298
Query: 278 -FLRAFGCWGSGDGEFKGLEGVAVMSNGNIL-VCDRENHRIQVF 319
F+ FG G+ DG+F G+A+ ++ ++L V D +N RIQVF
Sbjct: 299 CFVDEFGSTGTADGQFDSPLGIALDNSNDLLYVADSKNDRIQVF 342
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 89/160 (55%), Gaps = 26/160 (16%)
Query: 97 FTWPRGIAVGPDNSIV-VADSSNHRVQVFQ-------SDGT--------FVGKFGSMGNK 140
FT P + + N ++ VADS N R+ +F+ DGT +V +FGS G+
Sbjct: 188 FTNPSEMIIDNSNDLLYVADSGNDRIVIFEIVDGTTCPDGTIESVDGICYVKEFGSSGDD 247
Query: 141 AGQLEHPHYIAVSNTNRVI-VSDSNNHRVQIFDVNGRVFQSDGT--------FVGKFGSM 191
G+ + P +A+++ N ++ VSDS+N R+QIF++ DGT FV +FGS
Sbjct: 248 EGEFDDPSGLALNSENDLLYVSDSDNDRIQIFEIVDGTTCPDGTDEIIDGVCFVDEFGST 307
Query: 192 GNKAGQLEHPHYIAVSNTNRVI-VSDSNNHRVQIFDVNGR 230
G GQ + P IA+ N+N ++ V+DS N R+Q+FD+N
Sbjct: 308 GTADGQFDSPLGIALDNSNDLLYVADSKNDRIQVFDLNSE 347
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 112/270 (41%), Gaps = 76/270 (28%)
Query: 126 SDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTF 184
+D F KFG++G+ +L++P + V SN + V D+NN+R+ +FD +G GTF
Sbjct: 10 ADVEFSFKFGTLGSDDDELDNPTDVIVKSNGREIYVVDNNNNRINVFDDDGDADFLYGTF 69
Query: 185 --VGKFGSMGNKA--------GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
V + + A GQ P YIA+ + V DS N RVQ+FD +G
Sbjct: 70 CNVAQIQDCNDNADGAEEDGDGQFNTPLYIAMDALGKFFVVDSENERVQVFDDDGEFQFK 129
Query: 235 FGSEGS-EEGQLKFPRGVAVDDQG------------------------------------ 257
GS S ++ L +GV + D
Sbjct: 130 LGSSDSGDDEYLGGAQGVTIQDSSRKIFVSNTENDSISVFGSTGNFLFDFDSFNGNDDFT 189
Query: 258 ------------YISVGDSGNNRIQIFT-------PDGQ--------FLRAFGCWGSGDG 290
+ V DSGN+RI IF PDG +++ FG G +G
Sbjct: 190 NPSEMIIDNSNDLLYVADSGNDRIVIFEIVDGTTCPDGTIESVDGICYVKEFGSSGDDEG 249
Query: 291 EFKGLEGVAVMSNGNIL-VCDRENHRIQVF 319
EF G+A+ S ++L V D +N RIQ+F
Sbjct: 250 EFDDPSGLALNSENDLLYVSDSDNDRIQIF 279
>gi|260824641|ref|XP_002607276.1| hypothetical protein BRAFLDRAFT_88224 [Branchiostoma floridae]
gi|229292622|gb|EEN63286.1| hypothetical protein BRAFLDRAFT_88224 [Branchiostoma floridae]
Length = 1035
Score = 105 bits (261), Expect = 4e-20, Method: Composition-based stats.
Identities = 73/260 (28%), Positives = 113/260 (43%), Gaps = 49/260 (18%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P +AV D IVVAD N R+Q DG+F K +LE + + TN
Sbjct: 786 FKCPTSLAVTTDGEIVVADRDNRRLQFLDKDGSF--------KKKVELEFNPWCVAALTN 837
Query: 157 RVIVSDSNNHRVQIFDVNGR-------------------------------------VFQ 179
++ + H + + D GR V
Sbjct: 838 GNLLVTGDGHNIHVLDKQGRAARVIQVIGAAEKDITTLGIAVDGSERIIVTIGYQVFVLS 897
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
G + KFG G QL ++ V+++N++I+SD NH ++IFD GR + + GS G
Sbjct: 898 PSGDVILKFGDKGQGQQQLSSYLHLTVNSSNQIIISDYLNHSLKIFDPTGRHLFTCGSRG 957
Query: 240 SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVA 299
S GQL P V D + I V D N+R+ +F+ DG F+R + +G+
Sbjct: 958 SGPGQLSGPYCVITDSEDNIIVADWNNHRVSVFSRDGTFIRHVLTPAVHGLSYP--KGLT 1015
Query: 300 VMSNGNILVCDRENHRIQVF 319
+ +G+++V D NH I++F
Sbjct: 1016 LTHDGHLVVSD--NHSIKIF 1033
>gi|451946204|ref|YP_007466799.1| NHL repeat protein [Desulfocapsa sulfexigens DSM 10523]
gi|451905552|gb|AGF77146.1| NHL repeat protein [Desulfocapsa sulfexigens DSM 10523]
Length = 353
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 130/281 (46%), Gaps = 26/281 (9%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF-------TWPR 101
G + P I + V D+ +VQ CF K F AF T P
Sbjct: 79 GHQDRSLVAPYAITGDRKGRLFVVDTFLQKVQ-CFDAAAKK----FHAFPAEDKPMTSPI 133
Query: 102 GIAVGPDNSIV-VADSSNHRVQVFQS-DGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRV 158
IAV S++ VADS + ++VF+ D T G L+ P +AV N +
Sbjct: 134 AIAVNNSTSLIYVADSKDGIIKVFKGVDDTNPQSIGK-----NILQRPTGLAVHLERNEL 188
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
V D+ ++ FD+ Q+ G +G FG+ G + GQ HP I+++ ++++D+
Sbjct: 189 FVVDTKLSQIFRFDL-----QTHG-LLGTFGAKGKQTGQFNHPTNISIARDGTLLITDAL 242
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
N R+Q + +G+ + +FGS G G PRGVA D I V D+ + IQIF G+
Sbjct: 243 NFRIQRYSASGQFLHTFGSAGDSPGHFSRPRGVATDSDNNIYVVDALFDNIQIFDNQGRL 302
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L FG G GEF G+ + N I V D N RIQ+F
Sbjct: 303 LMDFGKSGKEYGEFWLPAGIYIDPNDRIYVADSYNKRIQIF 343
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 99/234 (42%), Gaps = 38/234 (16%)
Query: 124 FQSDGTFVGKFGS--MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQS- 180
FQ +F+ +F +G++ L P+ I R+ V D+ +VQ FD + F +
Sbjct: 63 FQITESFLVRFWGYIVGHQDRSLVAPYAITGDRKGRLFVVDTFLQKVQCFDAAAKKFHAF 122
Query: 181 ----------------------------DG---TFVGKFGSMGNKAGQ--LEHPHYIAVS 207
DG F G + G+ L+ P +AV
Sbjct: 123 PAEDKPMTSPIAIAVNNSTSLIYVADSKDGIIKVFKGVDDTNPQSIGKNILQRPTGLAVH 182
Query: 208 -NTNRVIVSDSNNHRVQIFDVNGR-VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG 265
N + V D+ ++ FD+ ++ +FG++G + GQ P +++ G + + D+
Sbjct: 183 LERNELFVVDTKLSQIFRFDLQTHGLLGTFGAKGKQTGQFNHPTNISIARDGTLLITDAL 242
Query: 266 NNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
N RIQ ++ GQFL FG G G F GVA S+ NI V D IQ+F
Sbjct: 243 NFRIQRYSASGQFLHTFGSAGDSPGHFSRPRGVATDSDNNIYVVDALFDNIQIF 296
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL-----KTNCVFLAFTWP 100
GS G PG F+ PRG+A DN+I V D+ +Q+ L K+ + F P
Sbjct: 260 GSAGDSPGHFSRPRGVATDSDNNIYVVDALFDNIQIFDNQGRLLMDFGKSGKEYGEFWLP 319
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
GI + P++ I VADS N R+Q+FQ
Sbjct: 320 AGIYIDPNDRIYVADSYNKRIQIFQ 344
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV 81
RL G G E G F P GI + P++ I VADS N R+Q+
Sbjct: 301 RLLMDFGKSGKEYGEFWLPAGIYIDPNDRIYVADSYNKRIQI 342
>gi|322418549|ref|YP_004197772.1| NHL repeat containing protein [Geobacter sp. M18]
gi|320124936|gb|ADW12496.1| NHL repeat containing protein [Geobacter sp. M18]
Length = 345
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 118/238 (49%), Gaps = 12/238 (5%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
+++R F +G G+ FT P G+ +N+ V D+ + +V F +L
Sbjct: 114 EEKRYHF-VG--GAADNVFTLPIGVTEDQNNTAYVTDAGSGKV-FRFNLGELHPTLFVEG 169
Query: 97 FTWPRGIAVGPDNSIV-VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P GI P N+++ V D+ +V F G V +FG G+ + P +AV
Sbjct: 170 LRRPTGIVYNPANNLIYVTDTLAGQVAAFDRKGKEVFRFGRPGHGRQEFNLPTDLAVDAE 229
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
R+ V+D N R+QIF +G F+ +FG G+ G +AV++ + V
Sbjct: 230 GRIYVTDPLNARIQIF-------TKEGGFLREFGEAGDSVGYFGKAKGVAVNSEGHIYVC 282
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
D+ RVQ+F+ G+++ +FG+ GS +G+ P G+++D + V D+ NNRIQ+ +
Sbjct: 283 DAMYDRVQVFNQEGKLLITFGATGSGKGEFWMPSGISIDKDDNVYVADTFNNRIQLLS 340
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 128/267 (47%), Gaps = 19/267 (7%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA----FTWPRGIAVGPDNSIVV 113
P GI + I+VADS V + F + + + V A FT P G+ +N+ V
Sbjct: 87 PYGIHADCRSRILVADSQMRGVHI-FDREEKRYHFVGGAADNVFTLPIGVTEDQNNTAYV 145
Query: 114 ADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI-VSDSNNHRVQIFD 172
D+ + +V F +G+ G L P I + N +I V+D+ +V FD
Sbjct: 146 TDAGSGKVFRFN-----LGELHPTLFVEG-LRRPTGIVYNPANNLIYVTDTLAGQVAAFD 199
Query: 173 VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
G+ V +FG G+ + P +AV R+ V+D N R+QIF G +
Sbjct: 200 RKGKE-------VFRFGRPGHGRQEFNLPTDLAVDAEGRIYVTDPLNARIQIFTKEGGFL 252
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
FG G G +GVAV+ +G+I V D+ +R+Q+F +G+ L FG GSG GEF
Sbjct: 253 REFGEAGDSVGYFGKAKGVAVNSEGHIYVCDAMYDRVQVFNQEGKLLITFGATGSGKGEF 312
Query: 293 KGLEGVAVMSNGNILVCDRENHRIQVF 319
G+++ + N+ V D N+RIQ+
Sbjct: 313 WMPSGISIDKDDNVYVADTFNNRIQLL 339
>gi|291233509|ref|XP_002736695.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 1445
Score = 105 bits (261), Expect = 4e-20, Method: Composition-based stats.
Identities = 85/310 (27%), Positives = 141/310 (45%), Gaps = 37/310 (11%)
Query: 23 GIGQVGTTPRSQYLQKRRLQFKI----GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHR 78
GI QV T +Q++ + G GSE G ++P G+ + V AD N+R
Sbjct: 435 GIHQVAMTIANQHIPGSPFHIPVIQLVGKAGSE-GQLSYPWGLTINKHGDFVTADRWNNR 493
Query: 79 VQVCFPHFDLKTNCVFL-----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGK 133
V + + + + F F+ P +A+ DN + D SN +V V +G + K
Sbjct: 494 VTIHDSDGNYRQSFRFTDQFAKRFS-PCDVAISDDNEYFMLDDSNKQVVVSDENGKLIRK 552
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNR-VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
FGS ++++P IA++ N+ V VS+ + + R + G ++ FG G
Sbjct: 553 FGS-----SEIDNPFGIAINPVNKNVYVSEYDKDCI-------RKYTQSGVYIKSFGRSG 600
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
K + P+ +A ++ V + D NHR+Q+F+ + + + F S G + PR VA
Sbjct: 601 KKQKEFHRPNMLATNSKGLVYIPDMKNHRIQVFNSDDQFMFEFSSTGGS--TMSHPRAVA 658
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL---EGVAVMSNGNILVC 309
+D ++ V S +++ +G F+ D E GL GVAV +G I V
Sbjct: 659 IDKNDHVYV--SSEHKVTKHDSNGGFICRI------DSEKDGLNSPHGVAVCHDGRIAVV 710
Query: 310 DRENHRIQVF 319
DR+N I V
Sbjct: 711 DRDNQCISVL 720
Score = 89.4 bits (220), Expect = 2e-15, Method: Composition-based stats.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ + V AD ++RV + DG + F + + P +A+S+ N
Sbjct: 1197 PMGLTINKHGDFVTADYKDNRVTIHDRDGNYKQSF-RFTERFAKPFRPWDVAISDDNEYF 1255
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR-VIVSDSN 218
+ D NN +V + DVN ++ + G Q+++P IA++ N+ V VS+ N
Sbjct: 1256 MLDHNNRQVVVSDVNEKLIRCFG------------CPQIDNPCGIAINPVNKNVYVSEWN 1303
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
++ + G I SFG G ++G+ P +A++ +G + + D NNRIQ+F D QF
Sbjct: 1304 GDCIRKYTHRGVYIKSFGDSGDKQGEFICPCMLAINSKGLVYIPDCYNNRIQVFNSDDQF 1363
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
+ F +GD +GVA+ N + V
Sbjct: 1364 MFEFS--SNGDSPMNRPKGVAIDKNDYVYV 1391
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 15/191 (7%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
V G+ G++ G+L P + ++ + +D ++RV I D +G QS F +F
Sbjct: 1181 LVQTVGTTGSE-GKLNRPMGLTINKHGDFVTADYKDNRVTIHDRDGNYKQS-FRFTERFA 1238
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
+ P +A+S+ N + D NN +V + DVN ++I FG Q+ P
Sbjct: 1239 -------KPFRPWDVAISDDNEYFMLDHNNRQVVVSDVNEKLIRCFGCP-----QIDNPC 1286
Query: 250 GVAVDD-QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
G+A++ + V + + I+ +T G ++++FG G GEF +A+ S G + +
Sbjct: 1287 GIAINPVNKNVYVSEWNGDCIRKYTHRGVYIKSFGDSGDKQGEFICPCMLAINSKGLVYI 1346
Query: 309 CDRENHRIQVF 319
D N+RIQVF
Sbjct: 1347 PDCYNNRIQVF 1357
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 14/130 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P +A + + D NHR+QVF SD F+ +F S G + HP +A+ +
Sbjct: 606 FHRPNMLATNSKGLVYIPDMKNHRIQVFNSDDQFMFEFSSTGGST--MSHPRAVAIDKND 663
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
V V S+ H+V D S+G F+ + S K G L PH +AV + R+ V D
Sbjct: 664 HVYV--SSEHKVTKHD-------SNGGFICRIDS--EKDG-LNSPHGVAVCHDGRIAVVD 711
Query: 217 SNNHRVQIFD 226
+N + + +
Sbjct: 712 RDNQCISVLE 721
Score = 43.1 bits (100), Expect = 0.17, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 15/129 (11%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P +A+ + + D N+R+QVF SD F+ +F S G+ + P +A+ +
Sbjct: 1330 FICPCMLAINSKGLVYIPDCYNNRIQVFNSDDQFMFEFSSNGDSP--MNRPKGVAIDKND 1387
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
V VS H V +D S G F+ + S N A L P +A N RV V
Sbjct: 1388 YVYVSSL--HEVTKYD-------SYGQFICRIDS-DNDA--LSSPWGVAC-NAGRVAVVS 1434
Query: 217 SNNHRVQIF 225
N +++F
Sbjct: 1435 RGNDCIKVF 1443
Score = 37.4 bits (85), Expect = 9.0, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 13/138 (9%)
Query: 181 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGS 240
DGTF G++AG+L+ IA+ ++ I+ + I +NG ++ + G+ GS
Sbjct: 1142 DGTF--NVVITGSRAGRLQ----IAMKIGHQQILRSP----LYIDIING-LVQTVGTTGS 1190
Query: 241 EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
E G+L P G+ ++ G D +NR+ I DG + ++F F+ + VA+
Sbjct: 1191 E-GKLNRPMGLTINKHGDFVTADYKDNRVTIHDRDGNYKQSFRFTERFAKPFRPWD-VAI 1248
Query: 301 MSNGNILVCDRENHRIQV 318
+ + D N ++ V
Sbjct: 1249 SDDNEYFMLDHNNRQVVV 1266
>gi|260785780|ref|XP_002587938.1| hypothetical protein BRAFLDRAFT_87326 [Branchiostoma floridae]
gi|229273093|gb|EEN43949.1| hypothetical protein BRAFLDRAFT_87326 [Branchiostoma floridae]
Length = 866
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 115/231 (49%), Gaps = 29/231 (12%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC------FPHFDLKTNCVFLAFTW 99
G GS+PG F PRG+ V P N I VADS N RVQV HF
Sbjct: 624 GGDGSKPGKFLSPRGVVVSPSNDIFVADSHNRRVQVLSTEGVYLRHFPTVVPGTEDTDIK 683
Query: 100 PRGIAVGPDNSIVVAD---SSNHRVQVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVS- 153
PR + + + ++ V +++H VQ + +DGT + +F +G G IAV
Sbjct: 684 PRDVCMDGNGTLWVVGQGWTADHVVQ-YSTDGTAMARFNLTKIGCVRG-------IAVDM 735
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
TN ++V+D++ VQ VF DG+ V + ++ HP Y+ + ++
Sbjct: 736 RTNHILVTDADQGTVQ-------VFCPDGSLVRTVRH--PRDVEMRHPGYVTMDGEGNIL 786
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDS 264
VSD NN+ V ++D +G+ FG EGS EGQL +PRG+ D G+I V DS
Sbjct: 787 VSDWNNNYVYVYDESGKFRFQFGGEGSGEGQLYYPRGICTDSSGHILVADS 837
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 32/246 (13%)
Query: 84 PHFDLKTNCVFL--------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG 135
P DLK V F PRG+ V P N I VADS N RVQV ++G ++ F
Sbjct: 612 PTRDLKQGVVTFGGDGSKPGKFLSPRGVVVSPSNDIFVADSHNRRVQVLSTEGVYLRHFP 671
Query: 136 SM--GNKAGQLEHPHYIAVSNTNRVIVSD--SNNHRVQIFDVNGRVFQSDGTFVGKFG-- 189
++ G + ++ N +V + +H VQ + +DGT + +F
Sbjct: 672 TVVPGTEDTDIKPRDVCMDGNGTLWVVGQGWTADHVVQ--------YSTDGTAMARFNLT 723
Query: 190 SMGNKAGQLEHPHYIAVS-NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFP 248
+G G IAV TN ++V+D++ VQ+F +G ++ + + +++ P
Sbjct: 724 KIGCVRG-------IAVDMRTNHILVTDADQGTVQVFCPDGSLVRTV--RHPRDVEMRHP 774
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
V +D +G I V D NN + ++ G+F FG GSG+G+ G+ S+G+ILV
Sbjct: 775 GYVTMDGEGNILVSDWNNNYVYVYDESGKFRFQFGGEGSGEGQLYYPRGICTDSSGHILV 834
Query: 309 CDRENH 314
D H
Sbjct: 835 ADSVYH 840
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 13/138 (9%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS--EGSEEGQL 245
FG G+K G+ P + VS +N + V+DS+N RVQ+ G + F + G+E+ +
Sbjct: 623 FGGDGSKPGKFLSPRGVVVSPSNDIFVADSHNRRVQVLSTEGVYLRHFPTVVPGTEDTDI 682
Query: 246 KFPRGVAVDDQGYISV---GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV-M 301
K PR V +D G + V G + ++ +Q ++ DG + F G + G+AV M
Sbjct: 683 K-PRDVCMDGNGTLWVVGQGWTADHVVQ-YSTDGTAMARFNLTKIG-----CVRGIAVDM 735
Query: 302 SNGNILVCDRENHRIQVF 319
+ILV D + +QVF
Sbjct: 736 RTNHILVTDADQGTVQVF 753
>gi|260785804|ref|XP_002587950.1| hypothetical protein BRAFLDRAFT_87338 [Branchiostoma floridae]
gi|229273105|gb|EEN43961.1| hypothetical protein BRAFLDRAFT_87338 [Branchiostoma floridae]
Length = 797
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 114/255 (44%), Gaps = 56/255 (21%)
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE-HPHYIAVS 153
+ F PRG+ V P N I VAD SN RVQV ++G ++ F ++ G + PH + +
Sbjct: 541 VKFHHPRGVVVSPSNEIFVADMSNKRVQVHSTEGVYLRHFTAIVPGTGDKDMEPHDVCMD 600
Query: 154 ---------------------------------------------NTNRVIVSDSNNHRV 168
TN ++VSD + V
Sbjct: 601 GNGTLWVVGEGGSAEHVVQYSTDGTAMERFDLRRNDFLRGIAVDMRTNHILVSDPDQGAV 660
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
VF+ DG+ V ++ + G++ P +I V ++VSD H V ++D +
Sbjct: 661 H-------VFRPDGSLVR---TVRHPEGEMTRPGFITVDGEGNILVSDWGTHSVYVYDES 710
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G+ + FG EGS EGQL P G+ D G+I V DS N R+Q+FT G+F+R +
Sbjct: 711 GKFLFRFGGEGSGEGQLTRPAGICTDSSGHILVADSMNERVQMFTRHGEFVRTVRTGPNP 770
Query: 289 DGEFKGLEGVAVMSN 303
+G G EG V+++
Sbjct: 771 EGLTVGPEGQLVVTS 785
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 52/233 (22%)
Query: 131 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI-------------------- 170
V FG G++ + HP + VS +N + V+D +N RVQ+
Sbjct: 530 VMNFGRKGSEPVKFHHPRGVVVSPSNEIFVADMSNKRVQVHSTEGVYLRHFTAIVPGTGD 589
Query: 171 ---------FDVNGRV--------------FQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
D NG + + +DGT + +F N + IAV
Sbjct: 590 KDMEPHDVCMDGNGTLWVVGEGGSAEHVVQYSTDGTAMERFDLRRN-----DFLRGIAVD 644
Query: 208 -NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
TN ++VSD + V +F +G ++ + EG++ P + VD +G I V D G
Sbjct: 645 MRTNHILVSDPDQGAVHVFRPDGSLVRTV---RHPEGEMTRPGFITVDGEGNILVSDWGT 701
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ + ++ G+FL FG GSG+G+ G+ S+G+ILV D N R+Q+F
Sbjct: 702 HSVYVYDESGKFLFRFGGEGSGEGQLTRPAGICTDSSGHILVADSMNERVQMF 754
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G GS G T P GI I+VADS N RVQ+ H +
Sbjct: 707 YDESGKFLFRFGGEGSGEGQLTRPAGICTDSSGHILVADSMNERVQMFTRHGEFVRTV-- 764
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
P G+ VGP+ +VV SN V ++ S
Sbjct: 765 RTGPNPEGLTVGPEGQLVVTSFSNDIVIIYPS 796
>gi|260811450|ref|XP_002600435.1| hypothetical protein BRAFLDRAFT_99625 [Branchiostoma floridae]
gi|229285722|gb|EEN56447.1| hypothetical protein BRAFLDRAFT_99625 [Branchiostoma floridae]
Length = 722
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 130/272 (47%), Gaps = 32/272 (11%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
F IG G+ P G+AV D +I V + + RV++ FD KT +F
Sbjct: 463 FTIGQMGNRVEELDGPLGVAVNKDGNIAVVERVSKRVKI----FDAKTGQSLCSFPIESD 518
Query: 99 WPRGIAVGPDNSIVVAD-SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P GIAV + + V N+ ++ + +G + F K+G +++ +AV R
Sbjct: 519 CPFGIAVDSNERVFVTSFGENYGIRRYSKEGKLLNTF-----KSGCMKNTLGVAVLQDGR 573
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT-NRVIVSD 216
++V+D + Q DG+ + + G GQL+ P +++V + + + V+D
Sbjct: 574 MVVADREQKSCLLL-------QPDGSLIREIGK-----GQLQSPAFVSVDESRDMMFVTD 621
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
H+V +FD++G +FG++G EG+LK P G+ +D G I V ++ RIQ+F PDG
Sbjct: 622 IEAHKVFVFDLDGNQTFTFGTKGQNEGELKTPIGLTLDQTGNIIVVNNDGGRIQMFGPDG 681
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
F+R G G+ + +G I V
Sbjct: 682 TFIRTVATVKGGSP-----YGITLTPDGYIAV 708
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 26/223 (11%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG-SMGNKAGQLEHPHYIAVSNTNRV 158
P G+AV D +I V + + RV++F + K G S+ + + + P IAV + RV
Sbjct: 478 PLGVAVNKDGNIAVVERVSKRVKIFDA------KTGQSLCSFPIESDCPFGIAVDSNERV 531
Query: 159 IVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
V+ N+ ++ + G++ TF K G M N G +AV R++V+D
Sbjct: 532 FVTSFGENYGIRRYSKEGKLL---NTF--KSGCMKNTLG-------VAVLQDGRMVVADR 579
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIFTPDG 276
+ +G +I G +GQL+ P V+VD+ + + V D +++ +F DG
Sbjct: 580 EQKSCLLLQPDGSLIREIG-----KGQLQSPAFVSVDESRDMMFVTDIEAHKVFVFDLDG 634
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G +GE K G+ + GNI+V + + RIQ+F
Sbjct: 635 NQTFTFGTKGQNEGELKTPIGLTLDQTGNIIVVNNDGGRIQMF 677
>gi|260830144|ref|XP_002610021.1| hypothetical protein BRAFLDRAFT_99973 [Branchiostoma floridae]
gi|229295384|gb|EEN66031.1| hypothetical protein BRAFLDRAFT_99973 [Branchiostoma floridae]
Length = 614
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 120/267 (44%), Gaps = 55/267 (20%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT- 155
F P G+AV D I VAD N R+Q+F GTFV +F ++ + GQ P +AV
Sbjct: 356 FDRPFGVAVSEDGEIFVADRGNQRIQIFTLQGTFVSQFVTVIS-GGQNISPQNVAVDTEG 414
Query: 156 ----------------------------------NRVIVSDSNNHRVQIFDVNG------ 175
+R + D+ + + + G
Sbjct: 415 NLWVVGNHGVADFAVLYTREGKVLTTIDLQQTRWSRGVAIDTRRNNIIVTQTMGEWGFCC 474
Query: 176 ---RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
+VF+ DG V G K +++P YI V ++ ++VSD N V ++D + +
Sbjct: 475 GEVQVFRPDGKLVKTIG----KDQGMKNPEYITVDSSGNILVSDCENSSVYVYDEDTNFL 530
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
SFG EGS EGQL +PRG+ D G I V D GN+ +Q+F G+FL+ + +
Sbjct: 531 FSFGGEGSREGQLTYPRGICSDGSGNIVVADWGNSCVQLFDRRGRFLKHI------NTDI 584
Query: 293 KGLEGVAVMSNGNILVCDRENHRIQVF 319
+ VA+ +G ++V D N+ + +F
Sbjct: 585 RQPWAVAMAPHGQLIVTDDTNNTVTIF 611
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 30/197 (15%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G++ G+ + P +AVS + V+D N R+QIF + GTFV +F ++ +
Sbjct: 346 FGGKGSEQGEFDRPFGVAVSEDGEIFVADRGNQRIQIFTLQ-------GTFVSQFVTVIS 398
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV----NGRVITSFGSEGSEEGQLKFPR 249
GQ P +AV + V NH V F V G+V+T+ + Q ++ R
Sbjct: 399 -GGQNISPQNVAVDTEGNLWV--VGNHGVADFAVLYTREGKVLTTIDLQ-----QTRWSR 450
Query: 250 GVAVDDQG-----YISVGDSG--NNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMS 302
GVA+D + ++G+ G +Q+F PDG+ ++ G D K E + V S
Sbjct: 451 GVAIDTRRNNIIVTQTMGEWGFCCGEVQVFRPDGKLVKTIG----KDQGMKNPEYITVDS 506
Query: 303 NGNILVCDRENHRIQVF 319
+GNILV D EN + V+
Sbjct: 507 SGNILVSDCENSSVYVY 523
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
T+FG +GSE+G+ P GVAV + G I V D GN RIQIFT G F+ F SG G+
Sbjct: 344 TTFGGKGSEQGEFDRPFGVAVSEDGEIFVADRGNQRIQIFTLQGTFVSQFVTVISG-GQN 402
Query: 293 KGLEGVAVMSNGNILV 308
+ VAV + GN+ V
Sbjct: 403 ISPQNVAVDTEGNLWV 418
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + F G GS G T+PRGI +IVVAD N VQ+ FD + F
Sbjct: 523 YDEDTNFLFSFGGEGSREGQLTYPRGICSDGSGNIVVADWGNSCVQL----FDRRGR--F 576
Query: 95 LA-----FTWPRGIAVGPDNSIVVADSSNHRVQVF 124
L P +A+ P ++V D +N+ V +F
Sbjct: 577 LKHINTDIRQPWAVAMAPHGQLIVTDDTNNTVTIF 611
>gi|260806277|ref|XP_002598011.1| hypothetical protein BRAFLDRAFT_221294 [Branchiostoma floridae]
gi|229283281|gb|EEN54023.1| hypothetical protein BRAFLDRAFT_221294 [Branchiostoma floridae]
Length = 234
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 112/229 (48%), Gaps = 17/229 (7%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F G+AV + I VAD N R+QVF G FV +F ++ + +P +A+
Sbjct: 14 FRCAVGVAVSDEGEIFVADHRNQRIQVFTLRGAFVRQFPTVVPDEETMMNPDDVALDGEG 73
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAG------QLEHPHYIAVSNTN 210
+ V Q VF++DGT VG G+ + G +L++P ++ V
Sbjct: 74 NLWVVGK-----QFLCGEVHVFRADGTLVGTVGAHNSWWGYLFRRQRLKYPAFLTVDGDG 128
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
V V+D NH V +++ +G+ + FG EGS +GQL P+G+ D G I V D GN R++
Sbjct: 129 NVFVTDCENHCVFVYNEDGQFLFQFGGEGSVDGQLNDPQGICTDSAGNIVVADMGNGRVE 188
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+F G+FLR + + VA+ + G ++V D + + +F
Sbjct: 189 MFDKTGKFLRHVAT------DAQRPLAVAMATQGQLVVTDMHHDIVTIF 231
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 110/250 (44%), Gaps = 38/250 (15%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV--FLAFTW 99
+ IG GS G F G+AV + I VAD N R+QV F L+ V F
Sbjct: 1 RIMIGGEGSRKGEFRCAVGVAVSDEGEIFVADHRNQRIQV----FTLRGAFVRQFPTVVP 56
Query: 100 PRGIAVGPDNSIVVADSSNH-----------RVQVFQSDGTFVGKFGSMGNKAG------ 142
+ PD+ V D + V VF++DGT VG G+ + G
Sbjct: 57 DEETMMNPDD--VALDGEGNLWVVGKQFLCGEVHVFRADGTLVGTVGAHNSWWGYLFRRQ 114
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
+L++P ++ V V V+D NH V V+ DG F+ +FG G+ GQL P
Sbjct: 115 RLKYPAFLTVDGDGNVFVTDCENHCV-------FVYNEDGQFLFQFGGEGSVDGQLNDPQ 167
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
I + ++V+D N RV++FD G+ + ++ P VA+ QG + V
Sbjct: 168 GICTDSAGNIVVADMGNGRVEMFDKTGKFLRHVATDAQR------PLAVAMATQGQLVVT 221
Query: 263 DSGNNRIQIF 272
D ++ + IF
Sbjct: 222 DMHHDIVTIF 231
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 73/186 (39%), Gaps = 55/186 (29%)
Query: 189 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSF------------- 235
G G++ G+ +AVS+ + V+D N R+Q+F + G + F
Sbjct: 5 GGEGSRKGEFRCAVGVAVSDEGEIFVADHRNQRIQVFTLRGAFVRQFPTVVPDEETMMNP 64
Query: 236 ------------------------------------GSEGSEEGQL------KFPRGVAV 253
G+ S G L K+P + V
Sbjct: 65 DDVALDGEGNLWVVGKQFLCGEVHVFRADGTLVGTVGAHNSWWGYLFRRQRLKYPAFLTV 124
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
D G + V D N+ + ++ DGQFL FG GS DG+ +G+ S GNI+V D N
Sbjct: 125 DGDGNVFVTDCENHCVFVYNEDGQFLFQFGGEGSVDGQLNDPQGICTDSAGNIVVADMGN 184
Query: 314 HRIQVF 319
R+++F
Sbjct: 185 GRVEMF 190
>gi|260782174|ref|XP_002586166.1| hypothetical protein BRAFLDRAFT_109861 [Branchiostoma floridae]
gi|229271259|gb|EEN42177.1| hypothetical protein BRAFLDRAFT_109861 [Branchiostoma floridae]
Length = 649
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 113/245 (46%), Gaps = 42/245 (17%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM-GNKAGQLEHPHYIAVS-- 153
F++PRG+ V P N I V D N RVQV ++G ++ F ++ G+ PH + +
Sbjct: 395 FSYPRGVVVSPSNEIFVVDELNRRVQVNSTEGVYLRYFPTVVPGTGGKDMEPHDVCMDGN 454
Query: 154 ---------------------------------NTNRVIVSDSNNHRVQIFDVNG---RV 177
N +R I D + + + D + V
Sbjct: 455 GTLWVVGEGGSADHVVQYSTDGTAMAGFDLKKINYSRGIAVDMRTYHILVTDADQGEVHV 514
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS 237
F+ DG+ V +AG++ P Y+ V ++VSD N+ V ++D G+ + FG
Sbjct: 515 FRPDGSLVRTVRH--PRAGKI-RPRYVTVDGEGNILVSDWYNNYVYVYDEFGKFLFQFGG 571
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
+GS EGQL PRG+ D G+I V DSGN R+QIFT G+F+R G +G EG
Sbjct: 572 KGSGEGQLMSPRGICRDSSGHILVADSGNERVQIFTRHGEFVRTVRTGFKPTGLAEGPEG 631
Query: 298 VAVMS 302
V++
Sbjct: 632 QLVVT 636
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 55 FTWPRGIAVGPDN-SIVVADSSNHRVQVCFPHFDLKTNCVF--LAFTWPRGIAVGPDNSI 111
+ RGIAV I+V D+ V V P L PR + V + +I
Sbjct: 487 INYSRGIAVDMRTYHILVTDADQGEVHVFRPDGSLVRTVRHPRAGKIRPRYVTVDGEGNI 546
Query: 112 VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
+V+D N+ V V+ G F+ +FG G+ GQL P I ++ ++V+DS N RVQIF
Sbjct: 547 LVSDWYNNYVYVYDEFGKFLFQFGGKGSGEGQLMSPRGICRDSSGHILVADSGNERVQIF 606
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQL 198
+G ++ T G GQL
Sbjct: 607 TRHGEFVRTVRTGFKPTGLAEGPEGQL 633
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 81/222 (36%), Gaps = 90/222 (40%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI----------------------- 224
FG G+K G+ +P + VS +N + V D N RVQ+
Sbjct: 385 FGGGGSKPGKFSYPRGVVVSPSNEIFVVDELNRRVQVNSTEGVYLRYFPTVVPGTGGKDM 444
Query: 225 ------FDVNGRV-----------ITSFGSEGS-----EEGQLKFPRGVAVDDQGY-ISV 261
D NG + + + ++G+ + ++ + RG+AVD + Y I V
Sbjct: 445 EPHDVCMDGNGTLWVVGEGGSADHVVQYSTDGTAMAGFDLKKINYSRGIAVDMRTYHILV 504
Query: 262 GDSGNNRIQIFTPD--------------------------------------------GQ 277
D+ + +F PD G+
Sbjct: 505 TDADQGEVHVFRPDGSLVRTVRHPRAGKIRPRYVTVDGEGNILVSDWYNNYVYVYDEFGK 564
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG+G+ G+ S+G+ILV D N R+Q+F
Sbjct: 565 FLFQFGGKGSGEGQLMSPRGICRDSSGHILVADSGNERVQIF 606
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ F+ G +GS G PRGI I+VADS N RVQ+ H + V F
Sbjct: 564 KFLFQFGGKGSGEGQLMSPRGICRDSSGHILVADSGNERVQIFTRHGEF-VRTVRTGFK- 621
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVF 124
P G+A GP+ +VV +H V ++
Sbjct: 622 PTGLAEGPEGQLVVTGYLDHTVTIY 646
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
D++ +VIT FG GS+ G+ +PRGV V I V D N R+Q+ + +G +LR F
Sbjct: 377 DMDQQVIT-FGGGGSKPGKFSYPRGVVVSPSNEIFVVDELNRRVQVNSTEGVYLRYFPTV 435
Query: 286 GSGDGEFKGLEGVAVMSNGN 305
G G K +E V +GN
Sbjct: 436 VPGTG-GKDMEPHDVCMDGN 454
>gi|294945077|ref|XP_002784554.1| Sec18p, putative [Perkinsus marinus ATCC 50983]
gi|239897630|gb|EER16350.1| Sec18p, putative [Perkinsus marinus ATCC 50983]
Length = 306
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 85/142 (59%), Gaps = 5/142 (3%)
Query: 182 GTFVGKFGSM--GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG-RVITSFGSE 238
G G+ G G+ GQ P Y +++ R+ VSDS NHRVQ+FD N +++ + G
Sbjct: 114 GPLTGQIGDTTGGSGLGQFRSP-YSVCNHSGRMFVSDSLNHRVQVFDTNTLQLVYTIGQR 172
Query: 239 GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGV 298
G EG+ P G+ VD +G I V + GN+R+QIF DG+FL+ G +GS +GEF G GV
Sbjct: 173 GDGEGEFCDPSGIGVDAEGRIIVAEYGNDRVQIFDKDGKFLQCCGTFGSDEGEFYGPFGV 232
Query: 299 AVM-SNGNILVCDRENHRIQVF 319
V + N+L+ D NHR+QV
Sbjct: 233 HVCPATQNLLITDSCNHRVQVL 254
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 111 IVVADSSNHRVQVFQSDGT-FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 169
+ V+DS NHRVQVF ++ V G G+ G+ P I V R+IV++ N RVQ
Sbjct: 145 MFVSDSLNHRVQVFDTNTLQLVYTIGQRGDGEGEFCDPSGIGVDAEGRIIVAEYGNDRVQ 204
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSNNHRVQIF 225
IFD +G+ Q GTF G+ G+ P + V T ++++DS NHRVQ+
Sbjct: 205 IFDKDGKFLQCCGTF-------GSDEGEFYGPFGVHVCPATQNLLITDSCNHRVQVL 254
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 19/116 (16%)
Query: 69 IVVADSSNHRVQVCFPHFDLKTNCVFLAFTW------------PRGIAVGPDNSIVVADS 116
+ V+DS NHRVQV FD TN + L +T P GI V + I+VA+
Sbjct: 145 MFVSDSLNHRVQV----FD--TNTLQLVYTIGQRGDGEGEFCDPSGIGVDAEGRIIVAEY 198
Query: 117 SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSNNHRVQIF 171
N RVQ+F DG F+ G+ G+ G+ P + V T ++++DS NHRVQ+
Sbjct: 199 GNDRVQIFDKDGKFLQCCGTFGSDEGEFYGPFGVHVCPATQNLLITDSCNHRVQVL 254
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
I +D + R I + G++ + G GS GQ + P V + G + V DS N+R+Q+F
Sbjct: 102 IKTDDDIIRCGIGPLTGQIGDTTG--GSGLGQFRSPYSVC-NHSGRMFVSDSLNHRVQVF 158
Query: 273 -TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
T Q + G G G+GEF G+ V + G I+V + N R+Q+F
Sbjct: 159 DTNTLQLVYTIGQRGDGEGEFCDPSGIGVDAEGRIIVAEYGNDRVQIF 206
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD-----LKTNCVF 94
+L + IG RG G F P GI V + I+VA+ N RVQ+ FD L+ F
Sbjct: 164 QLVYTIGQRGDGEGEFCDPSGIGVDAEGRIIVAEYGNDRVQI----FDKDGKFLQCCGTF 219
Query: 95 LA----FTWPRGIAVGP-DNSIVVADSSNHRVQV-FQSDG 128
+ F P G+ V P ++++ DS NHRVQV + SDG
Sbjct: 220 GSDEGEFYGPFGVHVCPATQNLLITDSCNHRVQVLWSSDG 259
>gi|358637878|dbj|BAL25175.1| hypothetical protein AZKH_2875 [Azoarcus sp. KH32C]
Length = 406
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 145/309 (46%), Gaps = 37/309 (11%)
Query: 32 RSQY-----LQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDN-SIVVADSSNHRVQVCFPH 85
R+QY + RL+ + S+PG + + A+ N I VAD + + V
Sbjct: 108 RNQYDIRPLTEDERLKQMLTGPSSKPGEPAYRKPSALAARNGRIYVADPPTNSIVV---- 163
Query: 86 FDLKTNCVFLA-------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
FD+ VF T P +A+ +N++ V D+ H+V V+ S G F+ G+
Sbjct: 164 FDVPRGRVFQIGVREPNNVTSPTSLAIDGENNVYVLDAKRHQVMVYDSLGLFMYAVGN-- 221
Query: 139 NKAGQLEHPHYIAVSNTNRVI------VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
+L P +AVS+ + I D N+H+V + + R + + G G
Sbjct: 222 --PKELSKPSGVAVSDDGQKIFIVDRGTVDGNDHKVIAYSPDNRE-------LFRIGPRG 272
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
+ G++ P V+ + ++V DS N RVQ FD+ G FGS G+ GQ PR ++
Sbjct: 273 SAPGRVSIPLAATVTRGS-LLVLDSGNFRVQTFDLEGNFKGMFGSVGNGIGQFSRPRSIS 331
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFLRAFG--CWGSGDGEFKGLEGVAVMSNGNILVCD 310
D G I V D+ N +QIF+P G+ L G + G+F + G+AV G + V D
Sbjct: 332 ADQDGNIYVSDASFNNVQIFSPAGELLMWLGEPSLRNVPGQFGLIAGIAVDETGRLYVAD 391
Query: 311 RENHRIQVF 319
+ + +++V+
Sbjct: 392 QYHLKVEVY 400
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 116/243 (47%), Gaps = 21/243 (8%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV--FLAFTWP 100
F+IG R EP T P +A+ +N++ V D+ H+V V + L V + P
Sbjct: 172 FQIGVR--EPNNVTSPTSLAIDGENNVYVLDAKRHQVMV-YDSLGLFMYAVGNPKELSKP 228
Query: 101 RGIAVGPDNSIV------VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
G+AV D + D ++H+V + D + + G G+ G++ P V+
Sbjct: 229 SGVAVSDDGQKIFIVDRGTVDGNDHKVIAYSPDNRELFRIGPRGSAPGRVSIPLAATVTR 288
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ ++V DS N RVQ FD+ +G F G FGS+GN GQ P I+ + V
Sbjct: 289 GS-LLVLDSGNFRVQTFDL-------EGNFKGMFGSVGNGIGQFSRPRSISADQDGNIYV 340
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSE--EGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
SD++ + VQIF G ++ G GQ G+AVD+ G + V D + +++++
Sbjct: 341 SDASFNNVQIFSPAGELLMWLGEPSLRNVPGQFGLIAGIAVDETGRLYVADQYHLKVEVY 400
Query: 273 TPD 275
P+
Sbjct: 401 RPE 403
>gi|260785770|ref|XP_002587933.1| hypothetical protein BRAFLDRAFT_87321 [Branchiostoma floridae]
gi|229273088|gb|EEN43944.1| hypothetical protein BRAFLDRAFT_87321 [Branchiostoma floridae]
Length = 816
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 126/262 (48%), Gaps = 45/262 (17%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM----GNKA----------- 141
F +PRG+ V P N I VAD N RVQV ++G ++ F ++ G+K
Sbjct: 558 FYYPRGVVVSPSNEISVADIDNRRVQVHSTEGVYLRYFPTVVPGTGDKVMKPHDVCMDGN 617
Query: 142 ------GQLEHPHYIAVSNTN---------------RVIVSDSNNHRVQIFDVNG---RV 177
G+ E H++ +T+ R I D + + + D + V
Sbjct: 618 STLWVVGRGETAHHVVQYSTDGTAMAGFDLEKISYFRGIAVDMRTNHILVTDADRGAVLV 677
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS 237
F+ DG+ V ++ + G++ P YI + +VSDS++H V ++D +G+ + FG
Sbjct: 678 FRPDGSLVR---TVRHPRGEMTAPGYITMDGEGNFLVSDSDSHCVYVYDESGKFLFQFGG 734
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
GS EGQL RG+ D G+I V DS + +QIFT G+F+R GS F+ EG
Sbjct: 735 WGSGEGQLSGTRGICTDSSGHIIVADS-STWVQIFTRHGEFVRTVRT-GSSRTWFRP-EG 791
Query: 298 VAVMSNGNILVCDRENHRIQVF 319
+AV G ++V NH + VF
Sbjct: 792 LAVGPEGQLVVTSLSNHTVIVF 813
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 37/222 (16%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G++ G+ +P + VS +N + V+D +N RVQ+ G + T V G
Sbjct: 548 FGGKGSQPGKFYYPRGVVVSPSNEISVADIDNRRVQVHSTEGVYLRYFPTVVPGTGDKVM 607
Query: 194 K--------------AGQLEHPHYIAVSNTN---------------RVIVSDSNNHRVQI 224
K G+ E H++ +T+ R I D + + +
Sbjct: 608 KPHDVCMDGNSTLWVVGRGETAHHVVQYSTDGTAMAGFDLEKISYFRGIAVDMRTNHILV 667
Query: 225 FDVNGRVITSFGSEGSEEGQLKFPRG-------VAVDDQGYISVGDSGNNRIQIFTPDGQ 277
D + + F +GS ++ PRG + +D +G V DS ++ + ++ G+
Sbjct: 668 TDADRGAVLVFRPDGSLVRTVRHPRGEMTAPGYITMDGEGNFLVSDSDSHCVYVYDESGK 727
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG WGSG+G+ G G+ S+G+I+V D +Q+F
Sbjct: 728 FLFQFGGWGSGEGQLSGTRGICTDSSGHIIVADSSTW-VQIF 768
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW--GSGD 289
+ +FG +GS+ G+ +PRGV V ISV D N R+Q+ + +G +LR F G+GD
Sbjct: 545 VITFGGKGSQPGKFYYPRGVVVSPSNEISVADIDNRRVQVHSTEGVYLRYFPTVVPGTGD 604
Query: 290 GEFK 293
K
Sbjct: 605 KVMK 608
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD-LKTNCV 93
Y + + F+ G GS G + RGI I+VADSS VQ+ H + ++T
Sbjct: 722 YDESGKFLFQFGGWGSGEGQLSGTRGICTDSSGHIIVADSSTW-VQIFTRHGEFVRTVRT 780
Query: 94 FLAFTW--PRGIAVGPDNSIVVADSSNHRVQVF 124
+ TW P G+AVGP+ +VV SNH V VF
Sbjct: 781 GSSRTWFRPEGLAVGPEGQLVVTSLSNHTVIVF 813
>gi|262091900|gb|ACY25449.1| putative PKD domain containing protein [uncultured microorganism]
Length = 340
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 130/301 (43%), Gaps = 46/301 (15%)
Query: 56 TWPRGIAVGPDNSIVVADSS---NHRVQVC----------FPHFDLKTNCVFLAFTWPRG 102
++P IA+G D V+ + +++C H DL T TWP G
Sbjct: 25 SFPVDIAIGEDRVYVIGRTELGVGGNIRMCKLNDEMLNGDVSHGDLGT-MADTGHTWPVG 83
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
I D ++ V D H V + ++G +G++G G+ GQL+ P A + + + D
Sbjct: 84 ILRTDDGNLWVLDEGAHNVTTYSAEGEKLGQWGEHGSGPGQLDRPSGFAFNADGTLWIVD 143
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
+ NHR+Q F +G +G FG G GQ P I + + VSD N RV
Sbjct: 144 TQNHRLQ-------QFTPEGECLGGFGQFGAGPGQFNMPWGITFDSEGDMYVSDWRNDRV 196
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q F +G + FG E + G + P G+AVD+ G + V + NR+ +F G+++ +F
Sbjct: 197 QKFAPDGEQLMEFG-ELPDNGHIVRPCGIAVDEHGDLYVAERDKNRVVMFDRRGRYVESF 255
Query: 283 GCWGSGDG----------------EFKGLEGVAVM--------SNGNILVCDRENHRIQV 318
+ E LE ++ +G + +CD +HR+QV
Sbjct: 256 TGAATLSKMGREYIRANQKTLRLREMTSLEPQRLLRFPQGIRYQDGLLYICDFGSHRVQV 315
Query: 319 F 319
F
Sbjct: 316 F 316
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 108/245 (44%), Gaps = 44/245 (17%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV-----FLA-- 96
+ G GS PG P G A D ++ + D+ NHR+Q F + C+ F A
Sbjct: 114 QWGEHGSGPGQLDRPSGFAFNADGTLWIVDTQNHRLQ----QFTPEGECLGGFGQFGAGP 169
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F P GI + + V+D N RVQ F DG + +FG + + G + P IAV
Sbjct: 170 GQFNMPWGITFDSEGDMYVSDWRNDRVQKFAPDGEQLMEFGELPDN-GHIVRPCGIAVDE 228
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ V++ + +RV +FD GR +S F G +S R +
Sbjct: 229 HGDLYVAERDKNRVVMFDRRGRYVES---FTGA----------------ATLSKMGREYI 269
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+N +++ R +TS + L+FP+G+ D G + + D G++R+Q+F
Sbjct: 270 R-ANQKTLRL-----REMTSL----EPQRLLRFPQGIRYQD-GLLYICDFGSHRVQVFRK 318
Query: 275 DGQFL 279
D + L
Sbjct: 319 DAEPL 323
>gi|345479067|ref|XP_003423871.1| PREDICTED: tripartite motif-containing protein 3-like [Nasonia
vitripennis]
Length = 650
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 27/239 (11%)
Query: 100 PRGIA-VGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS-MGNKAGQLEHPHYIA-VSNTN 156
P+G+ V + V D HR+ V+ G + GS G+ + P IA + + +
Sbjct: 420 PQGVTFVESRQELFVTDKWKHRIFVYNRKGQLIRNIGSEKGSGELRFHSPWGIACLQSRD 479
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAG---------------QLEHP 201
+ V+D N R+QI +DGT+ G +G + P
Sbjct: 480 WLYVADMRNDRIQILG-------ADGTYKGTIAPSRRLSGSELVGRRIPAILGVHEFNEP 532
Query: 202 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISV 261
+AVS+ ++V+DS NH++++F G+++ + G G G LK P V +D QG I V
Sbjct: 533 TDVAVSDAA-IVVADSGNHKIKVFSHRGQLMFTIGGFGIFRGLLKSPEVVELDAQGNIFV 591
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVM-SNGNILVCDRENHRIQVF 319
GDS N R+Q+FT G+FLR G GS F + G+ + S+G++LV D N+ +Q+F
Sbjct: 592 GDSDNKRVQVFTSQGEFLRVLGSQGSNVPHFGWISGLLCLPSSGDLLVADSVNNALQLF 650
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 19/129 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPH-----FDLKTNCVFLAFTW-PRGIAVGPD 108
F P +AV D +IVVADS NH+++V F H F + +F P + +
Sbjct: 529 FNEPTDVAVS-DAAIVVADSGNHKIKV-FSHRGQLMFTIGGFGIFRGLLKSPEVVELDAQ 586
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY------IAVSNTNRVIVSD 162
+I V DS N RVQVF S G F+ GS G+ PH+ + + ++ ++V+D
Sbjct: 587 GNIFVGDSDNKRVQVFTSQGEFLRVLGSQGSNV-----PHFGWISGLLCLPSSGDLLVAD 641
Query: 163 SNNHRVQIF 171
S N+ +Q+F
Sbjct: 642 SVNNALQLF 650
>gi|260785794|ref|XP_002587945.1| hypothetical protein BRAFLDRAFT_87333 [Branchiostoma floridae]
gi|229273100|gb|EEN43956.1| hypothetical protein BRAFLDRAFT_87333 [Branchiostoma floridae]
Length = 348
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 134/284 (47%), Gaps = 33/284 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTW 99
G GS P F +P G+ V P N I VAD N +QV HF
Sbjct: 85 GGEGSYPRKFRFPCGVMVSPSNEIFVADEYNMPIQVHSTEGVYLRHFPTVVPGTGDKVMR 144
Query: 100 PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 155
PR + + + ++ V ++++H VQ + +DGT + F ++ + IAV T
Sbjct: 145 PRDVCMDGNGTLWVVGREETADHVVQ-YSTDGTAMAGFDVKKSR-----YVRGIAVDMRT 198
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
N ++V+D++ V VF+ DG+ V ++ G+ P YI V+ ++VS
Sbjct: 199 NHILVTDADQGAVH-------VFRPDGSLVR---TVRLPRGEKTDPWYITVNGEGNILVS 248
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
H V ++D +G+ + FG EGS E QL +P G+ G+I V D G R+QIFT
Sbjct: 249 GWGTHCVYVYDESGKFLFQFGGEGSGEDQLDYPCGICTVSSGHILVADFGTERVQIFTRH 308
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F+R F+ E +AV G ++V D + + + VF
Sbjct: 309 GEFVRTVPT------GFR-PECLAVGPEGQLVVTDWDKYTVTVF 345
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 91/222 (40%), Gaps = 36/222 (16%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM-- 191
FG G+ + P + VS +N + V+D N +Q+ G + T V G
Sbjct: 84 FGGEGSYPRKFRFPCGVMVSPSNEIFVADEYNMPIQVHSTEGVYLRHFPTVVPGTGDKVM 143
Query: 192 --------GNKA----GQLEHPHYIAVSNTN---------------RVIVSDSNNHRVQI 224
GN G+ E ++ +T+ R I D + + +
Sbjct: 144 RPRDVCMDGNGTLWVVGREETADHVVQYSTDGTAMAGFDVKKSRYVRGIAVDMRTNHILV 203
Query: 225 FDVNGRVITSFGSEGSEEGQLKFPRG-------VAVDDQGYISVGDSGNNRIQIFTPDGQ 277
D + + F +GS ++ PRG + V+ +G I V G + + ++ G+
Sbjct: 204 TDADQGAVHVFRPDGSLVRTVRLPRGEKTDPWYITVNGEGNILVSGWGTHCVYVYDESGK 263
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FL FG GSG+ + G+ +S+G+ILV D R+Q+F
Sbjct: 264 FLFQFGGEGSGEDQLDYPCGICTVSSGHILVADFGTERVQIF 305
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 19 LLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHR 78
+LVSG G T Y + + F+ G GS +P GI I+VAD R
Sbjct: 245 ILVSGWG---THCVYVYDESGKFLFQFGGEGSGEDQLDYPCGICTVSSGHILVADFGTER 301
Query: 79 VQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
VQ+ H + V F P +AVGP+ +VV D + V VF
Sbjct: 302 VQIFTRHGEF-VRTVPTGFR-PECLAVGPEGQLVVTDWDKYTVTVF 345
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW--GSGD 289
+ +FG EGS + +FP GV V I V D N IQ+ + +G +LR F G+GD
Sbjct: 81 VITFGGEGSYPRKFRFPCGVMVSPSNEIFVADEYNMPIQVHSTEGVYLRHFPTVVPGTGD 140
Query: 290 GEFKGLEGVAVMSNGNILVCDRE---NHRIQ 317
+ + V + NG + V RE +H +Q
Sbjct: 141 KVMRPRD-VCMDGNGTLWVVGREETADHVVQ 170
>gi|431918266|gb|ELK17493.1| Tripartite motif-containing protein 2 [Pteropus alecto]
Length = 711
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 119/238 (50%), Gaps = 31/238 (13%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT +G+A I++ADS+N VQ+F +DG F +FG G GQL+ P +AV +
Sbjct: 486 FTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSG 545
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+I++D +N V I F SDG F K GS G+L P ++V +IV D
Sbjct: 546 DIIIADYDNKWVSI-------FSSDGKFKTKIGS-----GKLMGPKGVSVDRNGHIIVVD 593
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFP------------RGVAVDDQGY---ISV 261
+ V IF NG+++T FGS G+ + Q P +A+ D Y ++V
Sbjct: 594 NKACCVFIFQPNGKIVTRFGSRGNGDRQFAEPFRPSGPSRLSESTAIAMWDDSYLPALAV 653
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G N+ +F G FL S D + G +G+A+ S+G+++V D NH +V+
Sbjct: 654 TVEG-NKPYVFDGSGSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFKVY 707
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 90/163 (55%), Gaps = 12/163 (7%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+ + G+ G G+ + +A S + +++++DSNN VQI F +DG F +FG
Sbjct: 472 LIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQI-------FSNDGQFKSRFG 524
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
G GQL+ P +AV + +I++D +N V IF +G+ T GS G+L P+
Sbjct: 525 IRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS-----GKLMGPK 579
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
GV+VD G+I V D+ + IF P+G+ + FG G+GD +F
Sbjct: 580 GVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQF 622
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 115/266 (43%), Gaps = 36/266 (13%)
Query: 31 PRSQYLQKRR--------LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC 82
P S Y +R L F++G++G G FT +G+A I++ADS+N VQ+
Sbjct: 454 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIF 513
Query: 83 FPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
K+ P G+AV P I++AD N V +F SDG F K GS
Sbjct: 514 SNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS- 572
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+L P ++V +IV D N +F +FQ +G V +FGS GN Q
Sbjct: 573 ----GKLMGPKGVSVDRNGHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQ 621
Query: 198 LEHPHYIA----VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGS-------EEGQLK 246
P + +S + + + D + V G F GS L
Sbjct: 622 FAEPFRPSGPSRLSESTAIAMWDDSYLPALAVTVEGNKPYVFDGSGSFLSYINTSADPLY 681
Query: 247 FPRGVAVDDQGYISVGDSGNNRIQIF 272
P+G+A+ G++ V DSGN+ +++
Sbjct: 682 GPQGLALTSDGHVVVADSGNHCFKVY 707
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 5/136 (3%)
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
+ + G+ G G+ + +A S + +++++DSNN VQIF +G+ + FG G G
Sbjct: 472 LIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPG 531
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
QL+ P GVAV G I + D N + IF+ DG+F G G+ G +GV+V N
Sbjct: 532 QLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKI-----GSGKLMGPKGVSVDRN 586
Query: 304 GNILVCDRENHRIQVF 319
G+I+V D + + +F
Sbjct: 587 GHIIVVDNKACCVFIF 602
>gi|17227918|ref|NP_484466.1| hypothetical protein all0422 [Nostoc sp. PCC 7120]
gi|17129767|dbj|BAB72380.1| all0422 [Nostoc sp. PCC 7120]
Length = 399
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 105/211 (49%), Gaps = 25/211 (11%)
Query: 120 RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVF 178
RV VF S G F+ GS G+ GQ + P + + T + V D N R+ +FD G
Sbjct: 80 RVDVFDSQGNFLRAIGSTGSGPGQFDEPADLRFNPITGDLHVGDVFNSRINVFDAQGNFK 139
Query: 179 QSDGTFVGK------FGSMG---NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
S G+F G FG G +KAG L V+D + +++++ +G
Sbjct: 140 TSYGSFSGAVEDRLFFGPGGMDFDKAGNL--------------YVTDFSADIIKVYNPDG 185
Query: 230 RVITSFGSEGSEEGQLKFPRGVAV-DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
I + GS GS +GQ P G+ + D+ G I + D N R+Q+ PDG FL AFG GS
Sbjct: 186 VEIRTIGSPGSGDGQFSGPGGLIISDNTGRIYINDQYNGRVQVLDPDGNFLFAFGSTGSA 245
Query: 289 DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F+ G+ V NI V D +N R+QVF
Sbjct: 246 PGQFREPIGIDVDEYENIYVADSQNSRVQVF 276
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 116/268 (43%), Gaps = 42/268 (15%)
Query: 45 IGSRGSEPGCFTWPRGIAVGP-DNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
IGS GS PG F P + P + V D N R+ V + KT+ +
Sbjct: 94 IGSTGSGPGQFDEPADLRFNPITGDLHVGDVFNSRINVFDAQGNFKTSYGSFSGAVEDRL 153
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 155
F P G+ ++ V D S ++V+ DG + GS G+ GQ P + +S NT
Sbjct: 154 FFGPGGMDFDKAGNLYVTDFSADIIKVYNPDGVEIRTIGSPGSGDGQFSGPGGLIISDNT 213
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
R+ ++D N RVQ+ D DG F+ FGS G+ GQ P I V + V+
Sbjct: 214 GRIYINDQYNGRVQVLD-------PDGNFLFAFGSTGSAPGQFREPIGIDVDEYENIYVA 266
Query: 216 DSNNHRVQIFDVNGRVITSFGSEG-SEEGQL-----------KFPRGVAVD--------- 254
DS N RVQ+FD +G +T+FG + G++ P G +D
Sbjct: 267 DSQNSRVQVFDKDGNFLTTFGEPTRNAAGEIVPPPTPPALGGTTPYGTPIDLTPGRFNWS 326
Query: 255 -----DQGYISVGDSGNNRIQIFTPDGQ 277
D G + VGD R+Q+ +G+
Sbjct: 327 AGLHYDDGKVYVGDFFQGRVQVLAVEGR 354
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 69/170 (40%), Gaps = 42/170 (24%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNS--IVVADSSNHRVQVCFPHFDL-----KTNCVFLAF 97
IGS GS G F+ P G+ + DN+ I + D N RVQV P + T F
Sbjct: 191 IGSPGSGDGQFSGPGGLIIS-DNTGRIYINDQYNGRVQVLDPDGNFLFAFGSTGSAPGQF 249
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS-MGNKAGQLEHP--------- 147
P GI V +I VADS N RVQVF DG F+ FG N AG++ P
Sbjct: 250 REPIGIDVDEYENIYVADSQNSRVQVFDKDGNFLTTFGEPTRNAAGEIVPPPTPPALGGT 309
Query: 148 --------------------HYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 177
HY + +V V D RVQ+ V GR
Sbjct: 310 TPYGTPIDLTPGRFNWSAGLHY----DDGKVYVGDFFQGRVQVLAVEGRT 355
>gi|260820375|ref|XP_002605510.1| hypothetical protein BRAFLDRAFT_92933 [Branchiostoma floridae]
gi|229290844|gb|EEN61520.1| hypothetical protein BRAFLDRAFT_92933 [Branchiostoma floridae]
Length = 627
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 122/274 (44%), Gaps = 33/274 (12%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW----- 99
+G G++ F P G+AV D+ I VAD+ N R+QV + L+ TW
Sbjct: 368 VGKAGTKQEQFNHPCGLAVSEDDVIFVADTDNKRIQVLNSSGEFVRVMPTLSKTWLGRNT 427
Query: 100 ---PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
P +AV + ++ V V VFQ DG FV F ++
Sbjct: 428 EHEPVWLAVSAEGNLYVTYHKKSGVDVFQEDGAFVTSFARN---------------VRSS 472
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
R+ +S + + V + R+F SDG F G +AVS ++VSD
Sbjct: 473 RIAISPLDGNIVVGSESGIRIFTSDGQAQKMFSGPAFLGG-------VAVSPQGDILVSD 525
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
H V+++ +G++ + G + GQ PRG+ VD +G + + D N R+Q+F G
Sbjct: 526 RREHCVKVYRPDGKLQRTLSGWGDKAGQCYSPRGICVDRRGNVILADRDNGRVQMFNSSG 585
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
+FLR G G E VA++S+G I+V D
Sbjct: 586 KFLRVLGTRADG---LDRPEEVALLSDGRIVVLD 616
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 135 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK 194
G G K Q HP +AVS + + V+D++N R+Q V S G FV ++
Sbjct: 369 GKAGTKQEQFNHPCGLAVSEDDVIFVADTDNKRIQ-------VLNSSGEFVRVMPTLSKT 421
Query: 195 --AGQLEH-PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSF---------------- 235
EH P ++AVS + V+ V +F +G +TSF
Sbjct: 422 WLGRNTEHEPVWLAVSAEGNLYVTYHKKSGVDVFQEDGAFVTSFARNVRSSRIAISPLDG 481
Query: 236 ----GSEG-----SEEGQLK-------FPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
GSE + +GQ + F GVAV QG I V D + ++++ PDG+
Sbjct: 482 NIVVGSESGIRIFTSDGQAQKMFSGPAFLGGVAVSPQGDILVSDRREHCVKVYRPDGKLQ 541
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
R WG G+ G+ V GN+++ DR+N R+Q+F
Sbjct: 542 RTLSGWGDKAGQCYSPRGICVDRRGNVILADRDNGRVQMF 581
>gi|260823292|ref|XP_002604117.1| hypothetical protein BRAFLDRAFT_71595 [Branchiostoma floridae]
gi|229289442|gb|EEN60128.1| hypothetical protein BRAFLDRAFT_71595 [Branchiostoma floridae]
Length = 533
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 143/304 (47%), Gaps = 46/304 (15%)
Query: 33 SQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC 92
+Q Q +R+ F G GSE G F P G+ V + + VAD N R+QV F L+
Sbjct: 256 NQTHQLQRMAF--GGLGSETGQFNCPCGVTVSDEGEVFVADRWNQRIQV----FTLQGTF 309
Query: 93 VFLAFTW--------PRGIAV-GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
V T P +A+ G N VV S H + G +G+F
Sbjct: 310 VRQFPTVMSGEEEMDPHDVAMDGEGNLWVVGGSCAHCAVQYNKQGRVLGRFD-------- 361
Query: 144 LEHPHY---IAV-SNTNRVIVS----DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA 195
L++ Y +AV + N ++++ D +N + Q+ VF+ DGT V ++G +
Sbjct: 362 LQYTQYNRGVAVDTRRNHILITQTTVDGDNLQGQVL-----VFRPDGTLVR---TVGQQQ 413
Query: 196 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD 255
G ++ P YI V ++VSD+ NH V +++ +G+ + FG EGS EGQL P G+ D
Sbjct: 414 G-MKFPWYITVDGEGNILVSDTWNHCVYVYNEDGQFLFQFGGEGSGEGQLMCPHGICSDR 472
Query: 256 QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHR 315
G I V D N +++F G+FL+ + VA+ G+++V D E R
Sbjct: 473 AGNIIVADQENRSMEMFDKTGKFLKHITT------DMTEPWAVAMAPQGHVIVTDMEEER 526
Query: 316 IQVF 319
+ ++
Sbjct: 527 VSIY 530
>gi|260785694|ref|XP_002587895.1| hypothetical protein BRAFLDRAFT_87283 [Branchiostoma floridae]
gi|229273050|gb|EEN43906.1| hypothetical protein BRAFLDRAFT_87283 [Branchiostoma floridae]
Length = 854
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 124/256 (48%), Gaps = 34/256 (13%)
Query: 26 QVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ----- 80
+V R+ +++R + F G RGSEPG F +PRG+ V P N I V D N RVQ
Sbjct: 533 KVAAAGRTGDMEQRVIAF--GGRGSEPGKFRFPRGVLVSPSNEIFVGDRLNRRVQFHNTK 590
Query: 81 -VCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGS 136
V +F P + + + ++ V ++++H VQ + +DGT + F
Sbjct: 591 GVYLRYFPTVVPGTEDKDMKPHDVCMDGNGTLWVVGQGETADHVVQ-YSTDGTAIAGF-- 647
Query: 137 MGNKAGQLEHPHY---IAVS-NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
LE H IAV+ T+ ++V+D + V VF DG+ V ++
Sbjct: 648 ------DLEKSHNYRGIAVNMRTSHILVTDPDQGEVH-------VFHPDGSLVR---TVR 691
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
+ G++ P YI V ++V+D + H ++D +G+ + FG E S EGQLK P G+
Sbjct: 692 HPRGEMTRPRYITVDGEGNILVTDWDKHCFYVYDESGKFLFQFGDEDSGEGQLKRPTGIC 751
Query: 253 VDDQGYISVGDSGNNR 268
D G+I V D GN R
Sbjct: 752 TDSWGHILVADYGNER 767
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 108/228 (47%), Gaps = 29/228 (12%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM--GNKAGQLEHPHYIAVSN 154
F +PRG+ V P N I V D N RVQ + G ++ F ++ G + ++ PH + +
Sbjct: 560 FRFPRGVLVSPSNEIFVGDRLNRRVQFHNTKGVYLRYFPTVVPGTEDKDMK-PHDVCMDG 618
Query: 155 TNRVIV---SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY---IAVS- 207
+ V ++ +H VQ + +DGT + F LE H IAV+
Sbjct: 619 NGTLWVVGQGETADHVVQ--------YSTDGTAIAGF--------DLEKSHNYRGIAVNM 662
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
T+ ++V+D + V +F +G ++ + G++ PR + VD +G I V D +
Sbjct: 663 RTSHILVTDPDQGEVHVFHPDGSLVRTVRHP---RGEMTRPRYITVDGEGNILVTDWDKH 719
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHR 315
++ G+FL FG SG+G+ K G+ S G+ILV D N R
Sbjct: 720 CFYVYDESGKFLFQFGDEDSGEGQLKRPTGICTDSWGHILVADYGNER 767
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 78/190 (41%), Gaps = 19/190 (10%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G++ G+ P + VS +N + V D N RVQ + G + T V
Sbjct: 550 FGGRGSEPGKFRFPRGVLVSPSNEIFVGDRLNRRVQFHNTKGVYLRYFPTVVPGTEDKDM 609
Query: 194 KAGQLEHPHYIAVSNTNRVIV---SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRG 250
K PH + + + V ++ +H VQ + +G I F E S RG
Sbjct: 610 K------PHDVCMDGNGTLWVVGQGETADHVVQ-YSTDGTAIAGFDLEKSHNY-----RG 657
Query: 251 VAVDDQ-GYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+AV+ + +I V D + +F PDG +R GE + V GNILV
Sbjct: 658 IAVNMRTSHILVTDPDQGEVHVFHPDGSLVRTVR---HPRGEMTRPRYITVDGEGNILVT 714
Query: 310 DRENHRIQVF 319
D + H V+
Sbjct: 715 DWDKHCFYVY 724
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 59/126 (46%), Gaps = 15/126 (11%)
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL 245
GK +G KA + EH H + +V + D+ RVI +FG GSE G+
Sbjct: 513 GKEDVLGTKAHEQEH-HTVGT----KVAAAGRTG------DMEQRVI-AFGGRGSEPGKF 560
Query: 246 KFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW--GSGDGEFKGLEGVAVMSN 303
+FPRGV V I VGD N R+Q G +LR F G+ D + K + V + N
Sbjct: 561 RFPRGVLVSPSNEIFVGDRLNRRVQFHNTKGVYLRYFPTVVPGTEDKDMKPHD-VCMDGN 619
Query: 304 GNILVC 309
G + V
Sbjct: 620 GTLWVV 625
>gi|260785750|ref|XP_002587923.1| hypothetical protein BRAFLDRAFT_87311 [Branchiostoma floridae]
gi|229273078|gb|EEN43934.1| hypothetical protein BRAFLDRAFT_87311 [Branchiostoma floridae]
Length = 908
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 115/245 (46%), Gaps = 41/245 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKF-GSMGNKAGQLEHPHYIAVSNT 155
F PRG+ V P N I VAD +N RVQV ++G ++ F G + ++ PH + +
Sbjct: 655 FVNPRGVVVSPSNEIFVADHNNRRVQVHSTEGVYLRHFPGVVPGTGDKVMKPHDVCMDGN 714
Query: 156 NRVIV---SDSNNHRVQI---------FD-----------VNGR--------------VF 178
+ V ++ +H +Q FD VN R VF
Sbjct: 715 GTLWVVGWGETADHVLQYSTDGTAMAGFDLKKIGYSRGIAVNMRTNYILETGGNNEVHVF 774
Query: 179 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSE 238
+ DG+ V ++ + G + P YI V ++VS NH V ++D +G+ + FG E
Sbjct: 775 RPDGSLVR---TVRHAEGGMTCPRYITVDGEGNILVSYWFNHCVYVYDESGKFLFQFGGE 831
Query: 239 GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGV 298
GS EGQL P G+ D G+I V D GN RIQIFT G+F+R F G G EG
Sbjct: 832 GSGEGQLDSPLGICTDSSGHILVADYGNERIQIFTRHGEFVRTFRTGFRPTGLAVGPEGQ 891
Query: 299 AVMSN 303
V+++
Sbjct: 892 LVVTS 896
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 55/231 (23%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI----------------------- 170
FG G++ G+ +P + VS +N + V+D NN RVQ+
Sbjct: 645 FGGEGSEPGKFVNPRGVVVSPSNEIFVADHNNRRVQVHSTEGVYLRHFPGVVPGTGDKVM 704
Query: 171 ------FDVNGRV--------------FQSDGTFVGKF--GSMGNKAGQLEHPHYIAVSN 208
D NG + + +DGT + F +G G IAV+
Sbjct: 705 KPHDVCMDGNGTLWVVGWGETADHVLQYSTDGTAMAGFDLKKIGYSRG-------IAVNM 757
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
I+ N+ V +F +G ++ + EG + PR + VD +G I V N+
Sbjct: 758 RTNYILETGGNNEVHVFRPDGSLVRTV---RHAEGGMTCPRYITVDGEGNILVSYWFNHC 814
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ ++ G+FL FG GSG+G+ G+ S+G+ILV D N RIQ+F
Sbjct: 815 VYVYDESGKFLFQFGGEGSGEGQLDSPLGICTDSSGHILVADYGNERIQIF 865
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 57 WPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--FTWPRGIAVGPDNSIVVA 114
+ RGIAV + ++ N+ V V P L T PR I V + +I+V+
Sbjct: 749 YSRGIAVNMRTNYILETGGNNEVHVFRPDGSLVRTVRHAEGGMTCPRYITVDGEGNILVS 808
Query: 115 DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 174
NH V V+ G F+ +FG G+ GQL+ P I ++ ++V+D N R+QIF +
Sbjct: 809 YWFNHCVYVYDESGKFLFQFGGEGSGEGQLDSPLGICTDSSGHILVADYGNERIQIFTRH 868
Query: 175 GRV-------FQSDGTFVGKFGSM 191
G F+ G VG G +
Sbjct: 869 GEFVRTFRTGFRPTGLAVGPEGQL 892
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
I D+ VIT FG EGSE G+ PRGV V I V D N R+Q+ + +G +LR F
Sbjct: 635 IGDMKQGVIT-FGGEGSEPGKFVNPRGVVVSPSNEIFVADHNNRRVQVHSTEGVYLRHFP 693
Query: 284 --CWGSGDGEFKGLEGVAVMSNGNILVC 309
G+GD K + V + NG + V
Sbjct: 694 GVVPGTGDKVMKPHD-VCMDGNGTLWVV 720
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G GS G P GI I+VAD N R+Q+ H + F
Sbjct: 818 YDESGKFLFQFGGEGSGEGQLDSPLGICTDSSGHILVADYGNERIQIFTRHGEFVR--TF 875
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
P G+AVGP+ +VV N V V+ S
Sbjct: 876 RTGFRPTGLAVGPEGQLVVTSYLNDIVTVYPS 907
>gi|260825381|ref|XP_002607645.1| hypothetical protein BRAFLDRAFT_84666 [Branchiostoma floridae]
gi|229292993|gb|EEN63655.1| hypothetical protein BRAFLDRAFT_84666 [Branchiostoma floridae]
Length = 589
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 104/217 (47%), Gaps = 32/217 (14%)
Query: 93 VFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
V+ F P G+AV DN + +AD N R+QVF DG ++ +F + A + PH IAV
Sbjct: 336 VWANFNCPTGVAVSQDNEVYIADLHNSRIQVFTMDGVYIREFTTTLPGAAEQRKPHDIAV 395
Query: 153 SNTNRVIVSDSNNHRVQ---------------IFDVNG--------RVFQSDGTFVGK-- 187
+ + V + H Q + D+ G +V +DG G
Sbjct: 396 DRNDNLWVV-TTTHVAQYSREGNYLGKIDLPHVIDLRGITVAMATEQVIVADGLSCGLRV 454
Query: 188 -----FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
+GS +++ P ++ V ++V+DSNN V + D G FGSEGS+E
Sbjct: 455 FSQDIYGS-DHRSPDPWWPEHVTVDGEGNILVTDSNNDCVHVLDREGNFKFKFGSEGSDE 513
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
GQL P+G+ VD +G I V D GN +++F G+FL
Sbjct: 514 GQLNDPQGICVDGKGNILVADKGNGCVKMFDSQGRFL 550
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 36/74 (48%)
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
F EGS P GVAV + + D N+RIQ+FT DG ++R F G E +
Sbjct: 330 FLGEGSVWANFNCPTGVAVSQDNEVYIADLHNSRIQVFTMDGVYIREFTTTLPGAAEQRK 389
Query: 295 LEGVAVMSNGNILV 308
+AV N N+ V
Sbjct: 390 PHDIAVDRNDNLWV 403
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
+F G+ P +AVS N V ++D +N R+Q+F ++G I F + + +
Sbjct: 329 RFLGEGSVWANFNCPTGVAVSQDNEVYIADLHNSRIQVFTMDGVYIREFTTTLPGAAEQR 388
Query: 247 FPRGVAVD 254
P +AVD
Sbjct: 389 KPHDIAVD 396
>gi|337285765|ref|YP_004625238.1| NHL repeat containing protein [Thermodesulfatator indicus DSM
15286]
gi|335358593|gb|AEH44274.1| NHL repeat containing protein [Thermodesulfatator indicus DSM
15286]
Length = 321
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 118/276 (42%), Gaps = 48/276 (17%)
Query: 61 IAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHR 120
I P N + ++S P F K F P + +GP+ I V D + +
Sbjct: 27 IVFWPTNCLSQSESDKS----ILPIFKYKLLFKIEGFKLPSDVDIGPEGWIYVLDGTQNL 82
Query: 121 VQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQS 180
V++F + G + G G+K L+ P +AVS V+V+DS NHR+ +F
Sbjct: 83 VRIFNALGQPLFTLG--GDKL--LKWPLGLAVSAKGEVLVADSQNHRLALFPPG------ 132
Query: 181 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-----------------RVIVSDSNNHRVQ 223
+ PHYI+V + I D++NHRV
Sbjct: 133 -----------------INKPHYISVPSPKGGRPSDPTDVGFGIDGKTYIAVDNDNHRVL 175
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
D G+++ + G G + ++P + D+QG I V + N R+Q+ +G FLR G
Sbjct: 176 ALDYKGKIVWATGEMGRGPEEFRYPFLMDTDEQGNIYVVEVINTRVQVLDKNGHFLRFIG 235
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
WG G+F +GVAV +G + V D IQ+F
Sbjct: 236 EWGIDPGQFFRPKGVAVSKDGKVFVSDSYVGVIQIF 271
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 124/288 (43%), Gaps = 25/288 (8%)
Query: 38 KRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC----FPHFDLKTNCV 93
K +L FKI F P + +GP+ I V D + + V++ P F L + +
Sbjct: 49 KYKLLFKIEG-------FKLPSDVDIGPEGWIYVLDGTQNLVRIFNALGQPLFTLGGDKL 101
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
WP G+AV ++VADS NHR+ +F K G+ P +
Sbjct: 102 L---KWPLGLAVSAKGEVLVADSQNHRLALFPPGINKPHYISVPSPKGGRPSDPTDVGFG 158
Query: 154 NTNRVIVS-DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
+ ++ D++NHRV D G++ V G MG + +P + +
Sbjct: 159 IDGKTYIAVDNDNHRVLALDYKGKI-------VWATGEMGRGPEEFRYPFLMDTDEQGNI 211
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V + N RVQ+ D NG + G G + GQ P+GVAV G + V DS IQIF
Sbjct: 212 YVVEVINTRVQVLDKNGHFLRFIGEWGIDPGQFFRPKGVAVSKDGKVFVSDSYVGVIQIF 271
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN-ILVCDRENHRIQVF 319
T G FL A G F+ G+AV NG + V + +R+ V
Sbjct: 272 TKQGNFLGAVGGPDGKLWRFQTPVGLAV--NGKRLYVVEMIKNRVLVL 317
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 82/226 (36%), Gaps = 61/226 (26%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQ-----VCFPHF---------------------- 86
WP G+AV ++VADS NHR+ + PH+
Sbjct: 101 LLKWPLGLAVSAKGEVLVADSQNHRLALFPPGINKPHYISVPSPKGGRPSDPTDVGFGID 160
Query: 87 -----------------DLKTNCVFLA---------FTWPRGIAVGPDNSIVVADSSNHR 120
D K V+ F +P + +I V + N R
Sbjct: 161 GKTYIAVDNDNHRVLALDYKGKIVWATGEMGRGPEEFRYPFLMDTDEQGNIYVVEVINTR 220
Query: 121 VQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQS 180
VQV +G F+ G G GQ P +AVS +V VSDS +QI F
Sbjct: 221 VQVLDKNGHFLRFIGEWGIDPGQFFRPKGVAVSKDGKVFVSDSYVGVIQI-------FTK 273
Query: 181 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
G F+G G K + + P +AV N R+ V + +RV + +
Sbjct: 274 QGNFLGAVGGPDGKLWRFQTPVGLAV-NGKRLYVVEMIKNRVLVLE 318
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 18/146 (12%)
Query: 38 KRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF 97
K ++ + G G P F +P + +I V + N RVQV L N FL F
Sbjct: 180 KGKIVWATGEMGRGPEEFRYPFLMDTDEQGNIYVVEVINTRVQV------LDKNGHFLRF 233
Query: 98 T--W---------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH 146
W P+G+AV D + V+DS +Q+F G F+G G K + +
Sbjct: 234 IGEWGIDPGQFFRPKGVAVSKDGKVFVSDSYVGVIQIFTKQGNFLGAVGGPDGKLWRFQT 293
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFD 172
P +AV N R+ V + +RV + +
Sbjct: 294 PVGLAV-NGKRLYVVEMIKNRVLVLE 318
>gi|348688902|gb|EGZ28716.1| hypothetical protein PHYSODRAFT_476490 [Phytophthora sojae]
Length = 839
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 112/231 (48%), Gaps = 25/231 (10%)
Query: 107 PDNSIVVADSSNHRVQVFQS-DGTFVGKFGS-MGNKAGQLEHPHYIAVSNTNRVIVSDSN 164
P +V++DS NH + +F + +G+F G+ G G+ G + P IAV N + VSD
Sbjct: 608 PRTMLVISDSGNHSLSLFDARNGSFCGRIGEGFGHVEGFFDSPQGIAVWNNRLLFVSDQC 667
Query: 165 NHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN--------------TN 210
NHRVQ+FD+ R F FG +G G+ P +A+ + ++
Sbjct: 668 NHRVQVFDLQTR------RFTRAFGRLGTAPGEFNFPTGLALCSALPETPKCNFGPHRSD 721
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ-GYISVGDSGNNRI 269
+++V+D+ N RVQ+ D+NG ++ + P GV+V + GYI V D N +
Sbjct: 722 KLVVADTGNCRVQVLDLNGGAQLVLDAKATPFDHPLSPVGVSVQQRSGYILVSDVANRCV 781
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV--MSNGNILVCDRENHRIQV 318
IFT G+FL AFG G + F V + +S G L+ + R +
Sbjct: 782 VIFTNYGEFLSAFGATGEVETRFVQPAAVVIVPLSTGTELLLAADASRCDI 832
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 136/332 (40%), Gaps = 73/332 (21%)
Query: 55 FTWPRGIAVGP-DNSIVVADSSNHRVQV-------C----FPHFDLK-----TNCVFLAF 97
F P +A P + IVVAD N V C P L+ +C+ L+F
Sbjct: 459 FHHPLALAYAPSEREIVVADRENASVYTYNFDAAGCTWLQLPRNQLRGVCSVHSCLQLSF 518
Query: 98 TWPRGIAVGPDNS----IVVADSSNHRVQVFQSDGT----FVGK-------FGSMGNKAG 142
T D + V+D + HRV V S F+G S G K G
Sbjct: 519 TIGNPEEQAKDTPKKTWLYVSDPTAHRVAVLDSSNLNLQFFIGATTYGDQPLCSNGFKPG 578
Query: 143 QLEHPHYIAV--------------SNTNR----VIVSDSNNHRVQIFDVNGRVFQSDGTF 184
+L HP ++A SN++ +++SDS NH + +FD +G+F
Sbjct: 579 ELNHPSFLATYSVGDDEVSAIIEGSNSSHPRTMLVISDSGNHSLSLFDAR------NGSF 632
Query: 185 VGKFGS-MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT-SFGSEGSEE 242
G+ G G+ G + P IAV N + VSD NHRVQ+FD+ R T +FG G+
Sbjct: 633 CGRIGEGFGHVEGFFDSPQGIAVWNNRLLFVSDQCNHRVQVFDLQTRRFTRAFGRLGTAP 692
Query: 243 GQLKFPRGVAV--------------DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G+ FP G+A+ + V D+GN R+Q+ +G +
Sbjct: 693 GEFNFPTGLALCSALPETPKCNFGPHRSDKLVVADTGNCRVQVLDLNGGAQLVLDAKATP 752
Query: 289 DGEFKGLEGVAVMS-NGNILVCDRENHRIQVF 319
GV+V +G ILV D N + +F
Sbjct: 753 FDHPLSPVGVSVQQRSGYILVSDVANRCVVIF 784
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 92/211 (43%), Gaps = 46/211 (21%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA----------FT 98
G G F P+GIAV + + V+D NHRVQV FDL+T A F
Sbjct: 641 GHVEGFFDSPQGIAVWNNRLLFVSDQCNHRVQV----FDLQTRRFTRAFGRLGTAPGEFN 696
Query: 99 WPRGIAV------------GPDNS--IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQL 144
+P G+A+ GP S +VVAD+ N RVQV +G G + KA
Sbjct: 697 FPTGLALCSALPETPKCNFGPHRSDKLVVADTGNCRVQVLDLNG---GAQLVLDAKATPF 753
Query: 145 EHP-HYIAVSNTNR---VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
+HP + VS R ++VSD N V I F + G F+ FG+ G +
Sbjct: 754 DHPLSPVGVSVQQRSGYILVSDVANRCVVI-------FTNYGEFLSAFGATGEVETRFVQ 806
Query: 201 PHYIAV----SNTNRVIVSDSNNHRVQIFDV 227
P + + + T ++ +D++ + F +
Sbjct: 807 PAAVVIVPLSTGTELLLAADASRCDISSFKL 837
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 32/166 (19%)
Query: 36 LQKRRLQFKIGSRGSEPGCFTWPRGIAV------------GPDNS--IVVADSSNHRVQV 81
LQ RR G G+ PG F +P G+A+ GP S +VVAD+ N RVQV
Sbjct: 676 LQTRRFTRAFGRLGTAPGEFNFPTGLALCSALPETPKCNFGPHRSDKLVVADTGNCRVQV 735
Query: 82 CFPHFDLK--TNCVFLAFTWPRGIAVGP--------DNSIVVADSSNHRVQVFQSDGTFV 131
DL V A P + P I+V+D +N V +F + G F+
Sbjct: 736 ----LDLNGGAQLVLDAKATPFDHPLSPVGVSVQQRSGYILVSDVANRCVVIFTNYGEFL 791
Query: 132 GKFGSMGNKAGQLEHPHYIAV----SNTNRVIVSDSNNHRVQIFDV 173
FG+ G + P + + + T ++ +D++ + F +
Sbjct: 792 SAFGATGEVETRFVQPAAVVIVPLSTGTELLLAADASRCDISSFKL 837
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 61/160 (38%), Gaps = 39/160 (24%)
Query: 55 FTWPRGIAVG-PDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIA--------- 104
T PRG+AV +D + + ++V + L TN + T R IA
Sbjct: 226 LTLPRGLAVDDAAGEFYASDEATNCIRV----YKLPTNSIAKGVTLERSIAGSRGIVMKR 281
Query: 105 -VGPDNS---IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR--- 157
G D S +VV D+ N R+ VF G FV G G G+ + ++N +
Sbjct: 282 PTGLDLSHYHVVVCDTGNSRLAVFAKRGAFVLTIGRKGLHGGEFYDLRDVKLANVRKRAI 341
Query: 158 ------------------VIVSDSNNHRVQIFDVNGRVFQ 179
IV+D N+RVQI + G +
Sbjct: 342 TRGIQPEADAGISNEQFEAIVADCGNYRVQILNERGEFLR 381
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 66/173 (38%), Gaps = 33/173 (19%)
Query: 143 QLEHPHYIAVSNT-NRVIVSDSNNHRVQIFDVN----GRVFQSDGTFVGKFGSMGNKAGQ 197
QL P +AV + SD + ++++ + + + + G G + +
Sbjct: 225 QLTLPRGLAVDDAAGEFYASDEATNCIRVYKLPTNSIAKGVTLERSIAGSRGIVMKRPTG 284
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL------------ 245
L+ HY V+V D+ N R+ +F G + + G +G G+
Sbjct: 285 LDLSHY-------HVVVCDTGNSRLAVFAKRGAFVLTIGRKGLHGGEFYDLRDVKLANVR 337
Query: 246 --KFPRGVAVDDQGYIS-------VGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
RG+ + IS V D GN R+QI G+FLR GS D
Sbjct: 338 KRAITRGIQPEADAGISNEQFEAIVADCGNYRVQILNERGEFLRQLSLLGSLD 390
>gi|260814765|ref|XP_002602084.1| hypothetical protein BRAFLDRAFT_159176 [Branchiostoma floridae]
gi|229287390|gb|EEN58096.1| hypothetical protein BRAFLDRAFT_159176 [Branchiostoma floridae]
Length = 242
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 44/257 (17%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------ 96
+ G +G + G F P +AV D + VAD+ NHRVQV FDL N FL
Sbjct: 1 LRFGQKGRQQGQFDGPVDVAVHGDR-LYVADTYNHRVQV----FDLSGN--FLKKISPSG 53
Query: 97 -------------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
T P G+AV D +V+AD + + + +F++DGT V + G G GQ
Sbjct: 54 ELMETKKFSLSEYCTNPYGLAVQRDGRVVIADPAKNSIFLFEADGTLVKQVGGQGEGEGQ 113
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
PH++ V + +IV+D NNH VQ+FD N F KFG G++ + P
Sbjct: 114 FNQPHFVCVDREDNIIVADKNNHCVQVFDRN-------MDFHHKFGREGDRPQDMWAPMG 166
Query: 204 IAVSNTNRVIVSD--------SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD 255
++ + +++++ + ++Q+F +G +++ SEG +LK+P GVAV +
Sbjct: 167 VSADSRGNIVLANMGGTTDGVGHGEKLQVFQSDGTWVSTISSEGD---KLKWPHGVAVTE 223
Query: 256 QGYISVGDSGNNRIQIF 272
G++ V D + I+ +
Sbjct: 224 DGHVFVADVAGHFIRKY 240
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 9/141 (6%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
+FG G + GQ + P +AV + +R+ V+D+ NHRVQ+FD++G + G K
Sbjct: 2 RFGQKGRQQGQFDGPVDVAV-HGDRLYVADTYNHRVQVFDLSGNFLKKISPSGELMETKK 60
Query: 247 F--------PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGV 298
F P G+AV G + + D N I +F DG ++ G G G+G+F V
Sbjct: 61 FSLSEYCTNPYGLAVQRDGRVVIADPAKNSIFLFEADGTLVKQVGGQGEGEGQFNQPHFV 120
Query: 299 AVMSNGNILVCDRENHRIQVF 319
V NI+V D+ NH +QVF
Sbjct: 121 CVDREDNIIVADKNNHCVQVF 141
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 10/183 (5%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGS-M 191
+FG G + GQ + P +AV + +R+ V+D+ NHRVQ+FD++G + + G M
Sbjct: 2 RFGQKGRQQGQFDGPVDVAV-HGDRLYVADTYNHRVQVFDLSGNFLKK----ISPSGELM 56
Query: 192 GNKAGQLEH----PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
K L P+ +AV RV+++D + + +F+ +G ++ G +G EGQ
Sbjct: 57 ETKKFSLSEYCTNPYGLAVQRDGRVVIADPAKNSIFLFEADGTLVKQVGGQGEGEGQFNQ 116
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P V VD + I V D N+ +Q+F + F FG G + GV+ S GNI+
Sbjct: 117 PHFVCVDREDNIIVADKNNHCVQVFDRNMDFHHKFGREGDRPQDMWAPMGVSADSRGNIV 176
Query: 308 VCD 310
+ +
Sbjct: 177 LAN 179
>gi|260798789|ref|XP_002594382.1| hypothetical protein BRAFLDRAFT_208866 [Branchiostoma floridae]
gi|229279616|gb|EEN50393.1| hypothetical protein BRAFLDRAFT_208866 [Branchiostoma floridae]
Length = 220
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 111/224 (49%), Gaps = 21/224 (9%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 155
FT P G+AV D I VAD N+R+QVF GTF+ + + ++ PH +A+ +
Sbjct: 14 FTRPLGVAVSEDGHIFVADCGNNRIQVFDLQGTFMHSM--VTSLYNEVMSPHDVAIDGDG 71
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
N +V D++ ++ F+ DGT V G K + HP Y+AV + VS
Sbjct: 72 NLWVVGDTDRVVLE--------FRPDGTLVKMVG----KQQGMNHPQYMAVDREGNIFVS 119
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D + V ++D +G FG S +LK+PRG+ D G I V DS N +Q+F
Sbjct: 120 DFFHDCVYVYDNSGNFQFKFGDGASSGHRLKYPRGICTDLSGNIIVADSRNGCLQVFDKT 179
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+FL++ SG VA+ + G+++V D + + +F
Sbjct: 180 GKFLKSITTDSSGP------SAVAMATQGHLVVTDEQEDTVTIF 217
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 106/225 (47%), Gaps = 28/225 (12%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK-------TNCVFLAFTWPRGIAVGP 107
FT P G+AV D I VAD N+R+QV FDL+ ++ P +A+
Sbjct: 14 FTRPLGVAVSEDGHIFVADCGNNRIQV----FDLQGTFMHSMVTSLYNEVMSPHDVAIDG 69
Query: 108 DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 167
D ++ V ++ V F+ DGT V G K + HP Y+AV + VSD +
Sbjct: 70 DGNLWVVGDTDRVVLEFRPDGTLVKMVG----KQQGMNHPQYMAVDREGNIFVSDFFHDC 125
Query: 168 VQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 227
V ++D + G F KFG + +L++P I + +IV+DS N +Q+FD
Sbjct: 126 VYVYD-------NSGNFQFKFGDGASSGHRLKYPRGICTDLSGNIIVADSRNGCLQVFDK 178
Query: 228 NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
G+ + S ++ S P VA+ QG++ V D + + IF
Sbjct: 179 TGKFLKSITTDSSG------PSAVAMATQGHLVVTDEQEDTVTIF 217
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 9/95 (9%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y QFK G S +PRGI +I+VADS N +QV FD KT
Sbjct: 129 YDNSGNFQFKFGDGASSGHRLKYPRGICTDLSGNIIVADSRNGCLQV----FD-KTGKFL 183
Query: 95 LAFTW----PRGIAVGPDNSIVVADSSNHRVQVFQ 125
+ T P +A+ +VV D V +F+
Sbjct: 184 KSITTDSSGPSAVAMATQGHLVVTDEQEDTVTIFE 218
>gi|260835848|ref|XP_002612919.1| hypothetical protein BRAFLDRAFT_227863 [Branchiostoma floridae]
gi|229298301|gb|EEN68928.1| hypothetical protein BRAFLDRAFT_227863 [Branchiostoma floridae]
Length = 604
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 128/277 (46%), Gaps = 19/277 (6%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAV 105
G GS G T PRG+ V + I V D + + +D V +F P +
Sbjct: 338 GHAGSGEGQLTEPRGMTVTSEGRIFVMDGCSDIEEGEIKEYDSAGQFVGKSF-QPHYFHL 396
Query: 106 GPDNS--IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSD 162
DN+ + V V GT V FG GQL +P +A+ +V+V+D
Sbjct: 397 AADNTGHLFCTRPQQETVDVLDKLGTCVQTFGK-----GQLSYPLGVAIHPVGGQVLVTD 451
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
+ + ++F ++Q DG + +FGS G +L +P +AV + + V D + H +
Sbjct: 452 T--QKCKVF-----IYQPDGLLIRQFGSSGRGDHELTYPISVAVDSAWNIYVPDHDCHCI 504
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
++F + G +GS++GQLK P+GV VD G I V DSGN R+ +F G+F R
Sbjct: 505 KVFAMMGTFRLKVAKKGSKDGQLKNPKGVCVDADGNIIVADSGNGRVSMFDSHGKFSRHL 564
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ D + V + +G + V D E+ R +F
Sbjct: 565 ---LTSDQGLRHPSQVTLTPDGRLAVMDIESCRGLIF 598
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G+ GQL P + V++ R+ V D + I + + + S G FVGK
Sbjct: 337 FGHAGSGEGQLTEPRGMTVTSEGRIFVMDGCS---DIEEGEIKEYDSAGQFVGKSF---- 389
Query: 194 KAGQLEHPHY--IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGV 251
PHY +A NT + + V + D G + +FG +GQL +P GV
Sbjct: 390 ------QPHYFHLAADNTGHLFCTRPQQETVDVLDKLGTCVQTFG-----KGQLSYPLGV 438
Query: 252 AVDDQ-GYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
A+ G + V D+ ++ I+ PDG +R FG G GD E VAV S NI V D
Sbjct: 439 AIHPVGGQVLVTDTQKCKVFIYQPDGLLIRQFGSSGRGDHELTYPISVAVDSAWNIYVPD 498
Query: 311 RENHRIQVF 319
+ H I+VF
Sbjct: 499 HDCHCIKVF 507
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 8/133 (6%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-----CFPHFDLKTNCVFLAFT 98
+ GS G T+P +AV +I V D H ++V F K
Sbjct: 469 QFGSSGRGDHELTYPISVAVDSAWNIYVPDHDCHCIKVFAMMGTFRLKVAKKGSKDGQLK 528
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P+G+ V D +I+VADS N RV +F S G F + + G L HP + ++ R+
Sbjct: 529 NPKGVCVDADGNIIVADSGNGRVSMFDSHGKFSRHL--LTSDQG-LRHPSQVTLTPDGRL 585
Query: 159 IVSDSNNHRVQIF 171
V D + R IF
Sbjct: 586 AVMDIESCRGLIF 598
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF--LAFT 98
+ K+ +GS+ G P+G+ V D +I+VADS N RV + H + +
Sbjct: 513 FRLKVAKKGSKDGQLKNPKGVCVDADGNIIVADSGNGRVSMFDSHGKFSRHLLTSDQGLR 572
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVF 124
P + + PD + V D + R +F
Sbjct: 573 HPSQVTLTPDGRLAVMDIESCRGLIF 598
>gi|340383207|ref|XP_003390109.1| PREDICTED: tripartite motif-containing protein 3-like [Amphimedon
queenslandica]
Length = 720
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 106/210 (50%), Gaps = 27/210 (12%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
G+AV N +V A S + VQVF DGT V + G GN GQ + P + V +R+ VS
Sbjct: 482 GVAVHT-NGVVFAGSRDGFVQVFSEDGTAVRRIGFKGNSDGQFQQPWGLLVVG-DRLYVS 539
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
D HRVQ F + G ++G+FGS GN GQ P ++++ ++V+DSNN R
Sbjct: 540 DDILHRVQYFSA------TTGQYIGQFGSRGNGNGQFSSPRGVSINGKGNILVADSNNKR 593
Query: 222 VQIFDVNG---RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
VQ+F+ +G +VI +G VAVD++G I V N IQIF+PD +
Sbjct: 594 VQVFEEDGTFVQVIQCYGK----------ATNVAVDNEGKIHVTIQSQNYIQIFSPDCKT 643
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
C +F G+A+ G I V
Sbjct: 644 SFNLAC------KFICPNGIAIDDEGYIFV 667
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
Query: 176 RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD-VNGRVITS 234
+VF DGT V + G GN GQ + P + V +R+ VSD HRVQ F G+ I
Sbjct: 501 QVFSEDGTAVRRIGFKGNSDGQFQQPWGLLVVG-DRLYVSDDILHRVQYFSATTGQYIGQ 559
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
FGS G+ GQ PRGV+++ +G I V DS N R+Q+F DG F++ C+G
Sbjct: 560 FGSRGNGNGQFSSPRGVSINGKGNILVADSNNKRVQVFEEDGTFVQVIQCYGKAT----- 614
Query: 295 LEGVAVMSNGNILVCDRENHRIQVF 319
VAV + G I V + + IQ+F
Sbjct: 615 --NVAVDNEGKIHVTIQSQNYIQIF 637
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 114/228 (50%), Gaps = 35/228 (15%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQ-SDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P G+ V D + V+D HRVQ F + G ++G+FGS GN GQ P ++++
Sbjct: 523 FQQPWGLLVVGDR-LYVSDDILHRVQYFSATTGQYIGQFGSRGNGNGQFSSPRGVSINGK 581
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
++V+DSNN RVQ VF+ DGTFV G +AV N ++ V+
Sbjct: 582 GNILVADSNNKRVQ-------VFEEDGTFVQVIQCYGKATN-------VAVDNEGKIHVT 627
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF--PRGVAVDDQGYI--SVGDSGNNRIQI 271
+ + +QIF + + TSF KF P G+A+DD+GYI SV + G + +
Sbjct: 628 IQSQNYIQIFSPDCK--TSFNL------ACKFICPNGIAIDDEGYIFVSVYNGGTFSLHL 679
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+P+ + ++ G D G+A+ ++G I V + +N+ I +
Sbjct: 680 LSPNRKQVKLIS--GLSDP-----WGIALSNDGYIYVAENKNNCIMKY 720
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 94/245 (38%), Gaps = 73/245 (29%)
Query: 32 RSQYLQKRRLQF--KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
R QY Q+ + GSRG+ G F+ PRG+++ +I+VADS+N RV
Sbjct: 545 RVQYFSATTGQYIGQFGSRGNGNGQFSSPRGVSINGKGNILVADSNNKRV---------- 594
Query: 90 TNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
QVF+ DGTFV G
Sbjct: 595 --------------------------------QVFEEDGTFVQVIQCYGKATN------- 615
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
+AV N ++ V+ + + +QIF + + +F N A + P+ IA+ +
Sbjct: 616 VAVDNEGKIHVTIQSQNYIQIFSPDCKT-----SF--------NLACKFICPNGIAIDDE 662
Query: 210 NRVIVSDSN--NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+ VS N + + N + + L P G+A+ + GYI V ++ NN
Sbjct: 663 GYIFVSVYNGGTFSLHLLSPNRKQVKLISG-------LSDPWGIALSNDGYIYVAENKNN 715
Query: 268 RIQIF 272
I +
Sbjct: 716 CIMKY 720
>gi|291612725|ref|YP_003522882.1| Fibronectin type III domain protein [Sideroxydans lithotrophicus
ES-1]
gi|291582837|gb|ADE10495.1| Fibronectin type III domain protein [Sideroxydans lithotrophicus
ES-1]
Length = 1251
Score = 102 bits (255), Expect = 2e-19, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 15/220 (6%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ V +I V D ++ G + +FGS G+ AGQ ++P IAVS + V V+
Sbjct: 377 AVTVDKSGAIWVLDKKKYQGAKLDETGKVLMRFGSEGSGAGQFDNPSAIAVSASGMVFVA 436
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
D +NH VQI F+ DG F+ G+ A +L P ++ + + D++
Sbjct: 437 DRSNHNVQI-------FREDGVFLNALN--GDNAKKLSAPVAMSFDQQGNLYILDASRGS 487
Query: 222 VQIFDVNGRVITSFGSEGSE-EGQLKFPRG-VAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
V + G+ + FG + E + QL P +A++D+ + V D+ N++++FTP GQ +
Sbjct: 488 VLAYSSTGQSLGEFGGKNKEGDRQLSRPVSLIAINDE--VMVLDA--NQVKVFTPKGQLV 543
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
R+FG GSG G F +A + LV D N R+QV
Sbjct: 544 RSFGAKGSGVGAFDDPVSIAYGGGSSFLVSDCGNKRVQVL 583
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 58/178 (32%), Positives = 86/178 (48%), Gaps = 15/178 (8%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P IAV + VAD SNH VQ+F+ DG F+ G+ A +L P ++
Sbjct: 419 FDNPSAIAVSASGMVFVADRSNHNVQIFREDGVFLNALN--GDNAKKLSAPVAMSFDQQG 476
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAG--QLEHPHYIAVSNTNRVIV 214
+ + D++ V + G QS G F GK NK G QL P + N + V+V
Sbjct: 477 NLYILDASRGSVLAYSSTG---QSLGEFGGK-----NKEGDRQLSRPVSLIAIN-DEVMV 527
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
D+N +V++F G+++ SFG++GS G P +A V D GN R+Q+
Sbjct: 528 LDAN--QVKVFTPKGQLVRSFGAKGSGVGAFDDPVSIAYGGGSSFLVSDCGNKRVQVL 583
Score = 80.5 bits (197), Expect = 9e-13, Method: Composition-based stats.
Identities = 67/229 (29%), Positives = 101/229 (44%), Gaps = 22/229 (9%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG-------QLEHPHYIAV 152
P +AV D VV +N V + G + G+FGS K+G L+ P IAV
Sbjct: 90 PEAVAVASDTIYVVDSKTNQVVMYSLATGKYQGRFGS---KSGGTLDSDFALDEPQGIAV 146
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAG--QLEHPHYIAVSNTN 210
+ V V+D+ N R+Q+F +NG VF S S K +L P IA+
Sbjct: 147 -HEGVVYVADTGNERIQMFGING-VFLSTLALSATPSSAAEKEKTYKLGEPTDIALDVEG 204
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
RV V D+++ ++++ NG + S G P + V + G I V D + I
Sbjct: 205 RVYVRDADDRSIKVYGPNGLYLRSMPKTGK-------PVAMRVAEDG-IYVADETGSDIL 256
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ DG +FG G G +FK L G+AV + V D + + +
Sbjct: 257 KYDFDGNLAYSFGSGGEGKAQFKSLSGLAVDKAQQVYVGDAKKSLVDAY 305
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 89/197 (45%), Gaps = 28/197 (14%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---- 95
++ + GS GS G F P IAV + VAD SNH VQ+ + + VFL
Sbjct: 404 KVLMRFGSEGSGAGQFDNPSAIAVSASGMVFVADRSNHNVQI------FREDGVFLNALN 457
Query: 96 -----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG--QLEHPH 148
+ P ++ ++ + D+S V + S G +G+FG NK G QL P
Sbjct: 458 GDNAKKLSAPVAMSFDQQGNLYILDASRGSVLAYSSTGQSLGEFGGK-NKEGDRQLSRPV 516
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 208
+ N + V+V D+N Q+ +VF G V FG+ G+ G + P IA
Sbjct: 517 SLIAIN-DEVMVLDAN----QV-----KVFTPKGQLVRSFGAKGSGVGAFDDPVSIAYGG 566
Query: 209 TNRVIVSDSNNHRVQIF 225
+ +VSD N RVQ+
Sbjct: 567 GSSFLVSDCGNKRVQVL 583
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 60/246 (24%), Positives = 103/246 (41%), Gaps = 33/246 (13%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP------HFDLKTNCVF--- 94
K+ ++ + P +AV D VV +N V F K+
Sbjct: 76 KLTAKSGDTDLIKRPEAVAVASDTIYVVDSKTNQVVMYSLATGKYQGRFGSKSGGTLDSD 135
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG--------SMGNKAGQLEH 146
A P+GIAV + + VAD+ N R+Q+F +G F+ + K +L
Sbjct: 136 FALDEPQGIAVH-EGVVYVADTGNERIQMFGINGVFLSTLALSATPSSAAEKEKTYKLGE 194
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
P IA+ RV V D+++ ++++ NG +S K G+ P + V
Sbjct: 195 PTDIALDVEGRVYVRDADDRSIKVYGPNGLYLRS-----------MPKTGK---PVAMRV 240
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
+ + + V+D + +D +G + SFGS G + Q K G+AVD + VGD+
Sbjct: 241 AE-DGIYVADETGSDILKYDFDGNLAYSFGSGGEGKAQFKSLSGLAVDKAQQVYVGDAKK 299
Query: 267 NRIQIF 272
+ + +
Sbjct: 300 SLVDAY 305
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
V DG V K + ++ P +AV++ +V N V G+ FG
Sbjct: 66 VMDKDGKSVMKLTAKSGDTDLIKRPEAVAVASDTIYVVDSKTNQVVMYSLATGKYQGRFG 125
Query: 237 SEG----SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
S+ + L P+G+AV +G + V D+GN RIQ+F +G FL
Sbjct: 126 SKSGGTLDSDFALDEPQGIAV-HEGVVYVADTGNERIQMFGINGVFL 171
>gi|260824810|ref|XP_002607360.1| hypothetical protein BRAFLDRAFT_69766 [Branchiostoma floridae]
gi|229292707|gb|EEN63370.1| hypothetical protein BRAFLDRAFT_69766 [Branchiostoma floridae]
Length = 627
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 122/275 (44%), Gaps = 60/275 (21%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS-MGNKAGQLEHPHYIAVSNT 155
F P G+ V + I VAD N R+QVF GTF+ +F + M N GQ PH +A+
Sbjct: 358 FNGPLGVTVSDEGKIFVADMMNQRIQVFTLQGTFIRQFLTVMSN--GQKMDPHDVAMDGE 415
Query: 156 NRV-------------------------------------IVSDSNNHRVQIFDVNG--- 175
+ + D+ + + I G
Sbjct: 416 GNLWVVGWTGSAHCAAQYNKQGRVLRKFDLQKTGPGWYGGVAVDTRRNHILITQTTGGIG 475
Query: 176 ------RVFQSDGTFVGKFGS----MGNKAGQLEHPHYIAVS-NTNRVIVSDSNNHRVQI 224
VF+ DGT V G+ + + +++ P YI V + ++VS+ +NH + +
Sbjct: 476 NPHGEVLVFRPDGTLVRTVGAKQWNLLRRQQRMKWPRYITVDRDLGNILVSNGDNHCIHV 535
Query: 225 FDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGC 284
+ +G+ + FG GS EGQL P G+ D G I V DSGN+R+++F G+FL+
Sbjct: 536 HNEDGQFLFKFGDLGSGEGQLYSPHGICTDRAGNIIVADSGNSRVEMFDKKGRFLKHIAT 595
Query: 285 WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ + + VA+ + G ++V D ENH + +F
Sbjct: 596 ------DMEKPQAVAMATQGQLVVTDYENHTVSIF 624
>gi|291233705|ref|XP_002736792.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 694
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 109/230 (47%), Gaps = 35/230 (15%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH--PHYIAVSN 154
+ P G+ + + IV AD N R+Q+ DG + ++E P + + N
Sbjct: 484 YNKPVGVTIDRNGDIVTADRGNKRLQITDKDGNY--------KNITKIEKIIPVDVCIFN 535
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVI 213
+V D +N +V I D+NG V + +F ++HP IAV + V
Sbjct: 536 DKYYMV-DYDNKQVVISDMNGHV-------IKEFSE------NMKHPQRIAVRPADGMVY 581
Query: 214 VSDSNN----------HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
VSD N H ++ + NG I SFG GS GQ K P +AVD+QG + VGD
Sbjct: 582 VSDWNGLVYEKTNKHGHWIRKYTTNGDYIKSFGGYGSNPGQFKGPSFMAVDNQGLLFVGD 641
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
NNRIQ+F D +++ +F C G GDG+ G+A+ + G + V N
Sbjct: 642 YNNNRIQVFNTDDEYMYSFKCSGKGDGQIYAPRGIAIDNEGYVYVASSNN 691
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 31/201 (15%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
V G G+ G+ P + + ++ +D N R+QI D +G + T + K
Sbjct: 470 LVKTIGKEGSGKGEYNKPVGVTIDRNGDIVTADRGNKRLQITDKDGNY--KNITKIEKII 527
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
P + + N +V D +N +V I D+NG VI F +K P+
Sbjct: 528 -----------PVDVCIFNDKYYMV-DYDNKQVVISDMNGHVIKEFSE------NMKHPQ 569
Query: 250 GVAV---DDQGYIS-----VGDSGNNR---IQIFTPDGQFLRAFGCWGSGDGEFKGLEGV 298
+AV D Y+S V + N I+ +T +G ++++FG +GS G+FKG +
Sbjct: 570 RIAVRPADGMVYVSDWNGLVYEKTNKHGHWIRKYTTNGDYIKSFGGYGSNPGQFKGPSFM 629
Query: 299 AVMSNGNILVCDRENHRIQVF 319
AV + G + V D N+RIQVF
Sbjct: 630 AVDNQGLLFVGDYNNNRIQVF 650
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
QI + G ++ + G EGS +G+ P GV +D G I D GN R+QI DG +
Sbjct: 463 QIHVIKG-LVKTIGKEGSGKGEYNKPVGVTIDRNGDIVTADRGNKRLQITDKDGNY 517
>gi|222054530|ref|YP_002536892.1| NHL repeat containing protein [Geobacter daltonii FRC-32]
gi|221563819|gb|ACM19791.1| NHL repeat containing protein [Geobacter daltonii FRC-32]
Length = 365
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 122/257 (47%), Gaps = 21/257 (8%)
Query: 69 IVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDG 128
+VV D + ++V V F K + P GIAV + +I V+D+S +V VF D
Sbjct: 101 VVVYDFNKNKVHV----FAEKDKELQSMMKEPMGIAVDNNANIYVSDASAKKVFVFNRDE 156
Query: 129 TFVGKFGSMGNKAGQLEHPHYIAVSNT-NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK 187
+ N + P IA+ N R++V+D H ++++D+NG+ ++
Sbjct: 157 KLINTI----NLTQDTKRPFGIAIDNDRKRLVVADPVVHNLEVYDLNGKHMKT------- 205
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
G +G+ G+ P ++ V + VS+S N R+Q+ D G+ + G G G+L+
Sbjct: 206 IGKLGSGPGEFYGPTWVTVLRNGNIAVSESRNCRLQLLDPEGKSLQIMGQRGDRPGELQM 265
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD-----GEFKGLEGVAVMS 302
P+G+A D + ++ D N I +F+ G++L G S + G F G+ +
Sbjct: 266 PKGIAADSENHLYSVDGRANAINVFSETGEYLLTVGGGYSAERKIAPGGFLLPIGIFIDQ 325
Query: 303 NGNILVCDRENHRIQVF 319
I V D+ N R Q+F
Sbjct: 326 KDTIYVVDQMNLRFQIF 342
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-------LAF 97
IG GS PG F P + V + +I V++S N R+Q+ P + K+ +
Sbjct: 206 IGKLGSGPGEFYGPTWVTVLRNGNIAVSESRNCRLQLLDP--EGKSLQIMGQRGDRPGEL 263
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG---SMGNK--AGQLEHPHYIAV 152
P+GIA +N + D + + VF G ++ G S K G P I +
Sbjct: 264 QMPKGIAADSENHLYSVDGRANAINVFSETGEYLLTVGGGYSAERKIAPGGFLLPIGIFI 323
Query: 153 SNTNRVIVSDSNNHRVQIF 171
+ + V D N R QIF
Sbjct: 324 DQKDTIYVVDQMNLRFQIF 342
>gi|148263977|ref|YP_001230683.1| NHL repeat-containing protein [Geobacter uraniireducens Rf4]
gi|146397477|gb|ABQ26110.1| NHL repeat containing protein [Geobacter uraniireducens Rf4]
Length = 343
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 15/268 (5%)
Query: 55 FTWPRGIAVGPDNSIVVADSSN---HRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSI 111
F P GI ++ + +AD+ HR + + P G+AV + ++
Sbjct: 79 FDAPYGITGDGESVLYIADTGVGLVHRYDLINREVGYIVQAGDEEMSSPVGVAVDGEKNL 138
Query: 112 VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
VADS N +V + G F+ + + +AG + P IAV++ N + D H++ IF
Sbjct: 139 YVADSVNAKVYKYNKKGQFLRE---LKYEAG-FKRPAGIAVNSRNEKFIVDVLAHKLYIF 194
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
D F+ F M K +L +P +A+ + V V+DS N +++++ G +
Sbjct: 195 G-------EDDRFIRDFPKM-KKGEELNYPSNVAIDRADNVYVTDSMNFTIKVYNREGDL 246
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ G G G P+G+AVD I V D+ + QIF G L+ G G G GE
Sbjct: 247 QRTIGQIGDSPGSFARPKGIAVDSDQQIYVVDATLDNFQIFNQKGNLLQLIGKNGGGAGE 306
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G+ + + I V D N RIQVF
Sbjct: 307 FYLPSGIYIDKHDRIFVTDTYNRRIQVF 334
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 103/227 (45%), Gaps = 13/227 (5%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-FTWPRGIAVGPDNSIVVADS 116
P G+AV + ++ VADS N +V + A F P GIAV N + D
Sbjct: 127 PVGVAVDGEKNLYVADSVNAKVYKYNKKGQFLRELKYEAGFKRPAGIAVNSRNEKFIVDV 186
Query: 117 SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
H++ +F D F+ F M K +L +P +A+ + V V+DS N + +
Sbjct: 187 LAHKLYIFGEDDRFIRDFPKM-KKGEELNYPSNVAIDRADNVYVTDSMNFTI-------K 238
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
V+ +G G +G+ G P IAV + ++ V D+ QIF+ G ++ G
Sbjct: 239 VYNREGDLQRTIGQIGDSPGSFARPKGIAVDSDQQIYVVDATLDNFQIFNQKGNLLQLIG 298
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
G G+ P G+ +D I V D+ N RIQ+F Q+L+ G
Sbjct: 299 KNGGGAGEFYLPSGIYIDKHDRIFVTDTYNRRIQVF----QYLKEGG 341
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 31/203 (15%)
Query: 32 RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC--------- 82
+ Q+L R L+++ G F P GIAV N + D H++ +
Sbjct: 154 KGQFL--RELKYEAG--------FKRPAGIAVNSRNEKFIVDVLAHKLYIFGEDDRFIRD 203
Query: 83 FPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
FP +P +A+ +++ V DS N ++V+ +G G +G+ G
Sbjct: 204 FPKMKKGEEL-----NYPSNVAIDRADNVYVTDSMNFTIKVYNREGDLQRTIGQIGDSPG 258
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
P IAV + ++ V D+ QIF+ G + Q G G AG+ P
Sbjct: 259 SFARPKGIAVDSDQQIYVVDATLDNFQIFNQKGNLLQL-------IGKNGGGAGEFYLPS 311
Query: 203 YIAVSNTNRVIVSDSNNHRVQIF 225
I + +R+ V+D+ N R+Q+F
Sbjct: 312 GIYIDKHDRIFVTDTYNRRIQVF 334
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
LQ IG G PG F P+GIAV D I V D++ Q+ F+ K N + L
Sbjct: 246 LQRTIGQIGDSPGSFARPKGIAVDSDQQIYVVDATLDNFQI----FNQKGNLLQLIGKNG 301
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
F P GI + + I V D+ N R+QVFQ
Sbjct: 302 GGAGEFYLPSGIYIDKHDRIFVTDTYNRRIQVFQ 335
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 86/214 (40%), Gaps = 24/214 (11%)
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
GPDN I H ++ + F + G E YIA + V
Sbjct: 51 GPDNIITAPGKVQHLFEMVTGESRLKVDFDAPYGITGDGESVLYIADTGVGLV------- 103
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
HR +D+ R VG G++ ++ P +AV + V+DS N +V +
Sbjct: 104 HR---YDLINRE-------VGYIVQAGDE--EMSSPVGVAVDGEKNLYVADSVNAKVYKY 151
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
+ G+ F E E K P G+AV+ + + D +++ IF D +F+R F
Sbjct: 152 NKKGQ----FLRELKYEAGFKRPAGIAVNSRNEKFIVDVLAHKLYIFGEDDRFIRDFPKM 207
Query: 286 GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ E VA+ N+ V D N I+V+
Sbjct: 208 KKGE-ELNYPSNVAIDRADNVYVTDSMNFTIKVY 240
>gi|222525995|ref|YP_002570466.1| NHL repeat containing protein [Chloroflexus sp. Y-400-fl]
gi|222449874|gb|ACM54140.1| NHL repeat containing protein [Chloroflexus sp. Y-400-fl]
Length = 1122
Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats.
Identities = 61/185 (32%), Positives = 88/185 (47%), Gaps = 15/185 (8%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
GIA+ I VAD+ NHR++VF DGT V FG GN Q P +A + + ++
Sbjct: 830 GIAIDQQGQIYVADTYNHRIEVFAPDGTLVRNFGGQGNGLDQFYEPRGLAFDSQGNLYIA 889
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE--------------HPHYIAVS 207
D+ N RV + + R S G+ G G +A E P IAV
Sbjct: 890 DTWNARVVKYSADLRPIASWGSGDMDLGD-GRRATITEGDPARNAAAPLGFFGPRGIAVD 948
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+ V ++D+ N R+ + D NG+ + FG GS GQ P +A D G + V D+ N
Sbjct: 949 AADNVYIADTGNKRIVVTDSNGQFLYQFGGAGSAPGQFNEPTSLAFDAAGNLYVADTWNG 1008
Query: 268 RIQIF 272
R+Q+F
Sbjct: 1009 RVQVF 1013
Score = 100 bits (250), Expect = 6e-19, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 91/190 (47%), Gaps = 27/190 (14%)
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
IA+ ++ V+D+ NHR++ VF DGT V FG GN Q P +A +
Sbjct: 831 IAIDQQGQIYVADTYNHRIE-------VFAPDGTLVRNFGGQGNGLDQFYEPRGLAFDSQ 883
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQ------------------LKF--PR 249
+ ++D+ N RV + + R I S+GS + G L F PR
Sbjct: 884 GNLYIADTWNARVVKYSADLRPIASWGSGDMDLGDGRRATITEGDPARNAAAPLGFFGPR 943
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
G+AVD + + D+GN RI + +GQFL FG GS G+F +A + GN+ V
Sbjct: 944 GIAVDAADNVYIADTGNKRIVVTDSNGQFLYQFGGAGSAPGQFNEPTSLAFDAAGNLYVA 1003
Query: 310 DRENHRIQVF 319
D N R+QVF
Sbjct: 1004 DTWNGRVQVF 1013
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 74/291 (25%), Positives = 123/291 (42%), Gaps = 39/291 (13%)
Query: 60 GIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC-----VFLAFTWPRGIAVGPDNSIVVA 114
GIA+ I VAD+ NHR++V P L N F PRG+A ++ +A
Sbjct: 830 GIAIDQQGQIYVADTYNHRIEVFAPDGTLVRNFGGQGNGLDQFYEPRGLAFDSQGNLYIA 889
Query: 115 DSSNHRVQVFQSDGTFVGKFGSM------GNKAGQLE--------------HPHYIAVSN 154
D+ N RV + +D + +GS G +A E P IAV
Sbjct: 890 DTWNARVVKYSADLRPIASWGSGDMDLGDGRRATITEGDPARNAAAPLGFFGPRGIAVDA 949
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ V ++D+ N R+ + D NG+ F+ +FG G+ GQ P +A + V
Sbjct: 950 ADNVYIADTGNKRIVVTDSNGQ-------FLYQFGGAGSAPGQFNEPTSLAFDAAGNLYV 1002
Query: 215 SDSNNHRVQIF--DVNGRV----ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
+D+ N RVQ+F +GR+ + ++ G + P +AV +G + +
Sbjct: 1003 ADTWNGRVQVFGRGADGRIDPIPLATWPVPGWQANTYDDPM-LAVSPEGTVYIAVPSRQH 1061
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ G+ L + GS G+ V ++G++ + DR + R F
Sbjct: 1062 VLTANAAGEPLLRWTGVGSDSVPIASPSGIVVATDGSVWIVDRLSGRAARF 1112
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 31/255 (12%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRV------------------------QV 81
G +G+ F PRG+A ++ +AD+ N RV +
Sbjct: 863 GGQGNGLDQFYEPRGLAFDSQGNLYIADTWNARVVKYSADLRPIASWGSGDMDLGDGRRA 922
Query: 82 CFPHFDLKTNCVF-LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNK 140
D N L F PRGIAV +++ +AD+ N R+ V S+G F+ +FG G+
Sbjct: 923 TITEGDPARNAAAPLGFFGPRGIAVDAADNVYIADTGNKRIVVTDSNGQFLYQFGGAGSA 982
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF--DVNGRVFQSDGTFVGKFGSMGNKAGQL 198
GQ P +A + V+D+ N RVQ+F +GR+ D + + G +A
Sbjct: 983 PGQFNEPTSLAFDAAGNLYVADTWNGRVQVFGRGADGRI---DPIPLATWPVPGWQANTY 1039
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
+ P +AVS V ++ + V + G + + GS+ + P G+ V G
Sbjct: 1040 DDP-MLAVSPEGTVYIAVPSRQHVLTANAAGEPLLRWTGVGSDSVPIASPSGIVVATDGS 1098
Query: 259 ISVGDSGNNRIQIFT 273
+ + D + R F+
Sbjct: 1099 VWIVDRLSGRAARFS 1113
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 12/142 (8%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRG 102
++ G GS PG F P +A ++ VAD+ N RVQV D + + + LA TWP
Sbjct: 974 YQFGGAGSAPGQFNEPTSLAFDAAGNLYVADTWNGRVQVFGRGADGRIDPIPLA-TWPVP 1032
Query: 103 -----------IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
+AV P+ ++ +A S V + G + ++ +G+ + + P I
Sbjct: 1033 GWQANTYDDPMLAVSPEGTVYIAVPSRQHVLTANAAGEPLLRWTGVGSDSVPIASPSGIV 1092
Query: 152 VSNTNRVIVSDSNNHRVQIFDV 173
V+ V + D + R F +
Sbjct: 1093 VATDGSVWIVDRLSGRAARFSL 1114
>gi|163848101|ref|YP_001636145.1| NHL repeat-containing protein [Chloroflexus aurantiacus J-10-fl]
gi|163669390|gb|ABY35756.1| NHL repeat containing protein [Chloroflexus aurantiacus J-10-fl]
Length = 1139
Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats.
Identities = 61/185 (32%), Positives = 88/185 (47%), Gaps = 15/185 (8%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
GIA+ I VAD+ NHR++VF DGT V FG GN Q P +A + + ++
Sbjct: 847 GIAIDQQGQIYVADTYNHRIEVFAPDGTLVRNFGGQGNGLDQFYEPRGLAFDSQGNLYIA 906
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE--------------HPHYIAVS 207
D+ N RV + + R S G+ G G +A E P IAV
Sbjct: 907 DTWNARVVKYSADLRPIASWGSGDMDLGD-GRRATITEGDPARNAAAPLGFFGPRGIAVD 965
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+ V ++D+ N R+ + D NG+ + FG GS GQ P +A D G + V D+ N
Sbjct: 966 AADNVYIADTGNKRIVVTDSNGQFLYQFGGAGSAPGQFNEPTSLAFDAAGNLYVADTWNG 1025
Query: 268 RIQIF 272
R+Q+F
Sbjct: 1026 RVQVF 1030
Score = 100 bits (250), Expect = 6e-19, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 91/190 (47%), Gaps = 27/190 (14%)
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
IA+ ++ V+D+ NHR++ VF DGT V FG GN Q P +A +
Sbjct: 848 IAIDQQGQIYVADTYNHRIE-------VFAPDGTLVRNFGGQGNGLDQFYEPRGLAFDSQ 900
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQ------------------LKF--PR 249
+ ++D+ N RV + + R I S+GS + G L F PR
Sbjct: 901 GNLYIADTWNARVVKYSADLRPIASWGSGDMDLGDGRRATITEGDPARNAAAPLGFFGPR 960
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
G+AVD + + D+GN RI + +GQFL FG GS G+F +A + GN+ V
Sbjct: 961 GIAVDAADNVYIADTGNKRIVVTDSNGQFLYQFGGAGSAPGQFNEPTSLAFDAAGNLYVA 1020
Query: 310 DRENHRIQVF 319
D N R+QVF
Sbjct: 1021 DTWNGRVQVF 1030
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 74/291 (25%), Positives = 123/291 (42%), Gaps = 39/291 (13%)
Query: 60 GIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC-----VFLAFTWPRGIAVGPDNSIVVA 114
GIA+ I VAD+ NHR++V P L N F PRG+A ++ +A
Sbjct: 847 GIAIDQQGQIYVADTYNHRIEVFAPDGTLVRNFGGQGNGLDQFYEPRGLAFDSQGNLYIA 906
Query: 115 DSSNHRVQVFQSDGTFVGKFGSM------GNKAGQLE--------------HPHYIAVSN 154
D+ N RV + +D + +GS G +A E P IAV
Sbjct: 907 DTWNARVVKYSADLRPIASWGSGDMDLGDGRRATITEGDPARNAAAPLGFFGPRGIAVDA 966
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ V ++D+ N R+ + D NG+ F+ +FG G+ GQ P +A + V
Sbjct: 967 ADNVYIADTGNKRIVVTDSNGQ-------FLYQFGGAGSAPGQFNEPTSLAFDAAGNLYV 1019
Query: 215 SDSNNHRVQIF--DVNGRV----ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
+D+ N RVQ+F +GR+ + ++ G + P +AV +G + +
Sbjct: 1020 ADTWNGRVQVFGRGADGRIDPIPLATWPVPGWQANTYDDPM-LAVSPEGTVYIAVPSRQH 1078
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ G+ L + GS G+ V ++G++ + DR + R F
Sbjct: 1079 VLTANAAGEPLLRWTGVGSDSVPIASPSGIVVATDGSVWIVDRLSGRAARF 1129
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 31/255 (12%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRV------------------------QV 81
G +G+ F PRG+A ++ +AD+ N RV +
Sbjct: 880 GGQGNGLDQFYEPRGLAFDSQGNLYIADTWNARVVKYSADLRPIASWGSGDMDLGDGRRA 939
Query: 82 CFPHFDLKTNCVF-LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNK 140
D N L F PRGIAV +++ +AD+ N R+ V S+G F+ +FG G+
Sbjct: 940 TITEGDPARNAAAPLGFFGPRGIAVDAADNVYIADTGNKRIVVTDSNGQFLYQFGGAGSA 999
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF--DVNGRVFQSDGTFVGKFGSMGNKAGQL 198
GQ P +A + V+D+ N RVQ+F +GR+ D + + G +A
Sbjct: 1000 PGQFNEPTSLAFDAAGNLYVADTWNGRVQVFGRGADGRI---DPIPLATWPVPGWQANTY 1056
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
+ P +AVS V ++ + V + G + + GS+ + P G+ V G
Sbjct: 1057 DDP-MLAVSPEGTVYIAVPSRQHVLTANAAGEPLLRWTGVGSDSVPIASPSGIVVATDGS 1115
Query: 259 ISVGDSGNNRIQIFT 273
+ + D + R F+
Sbjct: 1116 VWIVDRLSGRAARFS 1130
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 12/142 (8%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRG 102
++ G GS PG F P +A ++ VAD+ N RVQV D + + + LA TWP
Sbjct: 991 YQFGGAGSAPGQFNEPTSLAFDAAGNLYVADTWNGRVQVFGRGADGRIDPIPLA-TWPVP 1049
Query: 103 -----------IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
+AV P+ ++ +A S V + G + ++ +G+ + + P I
Sbjct: 1050 GWQANTYDDPMLAVSPEGTVYIAVPSRQHVLTANAAGEPLLRWTGVGSDSVPIASPSGIV 1109
Query: 152 VSNTNRVIVSDSNNHRVQIFDV 173
V+ V + D + R F +
Sbjct: 1110 VATDGSVWIVDRLSGRAARFSL 1131
>gi|291221732|ref|XP_002730875.1| PREDICTED: tripartite motif-containing 3-like [Saccoglossus
kowalevskii]
Length = 617
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 132/268 (49%), Gaps = 25/268 (9%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-----AFTWPRGIAVGPDNSIV 112
P G+ + V AD N RV + + K + F FT P +A+ DN
Sbjct: 367 PLGLTINKHGDFVTADRGNRRVVIHDRDGNYKESFEFTDQFAKQFT-PSDVAISDDNEYF 425
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNHRVQIF 171
+ D +N ++ V +G + KFGS +++ P+ IA++ TN V VS+ + ++ +
Sbjct: 426 MTDDNNKQIVVSDENGKLIRKFGS-----SEIDDPYGIAINPVTNNVYVSEYSKGYIRKY 480
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
GR ++ G G+K G+L P +A+++ V V+D NN R+Q+F+ + +
Sbjct: 481 TQGGR-------YINSLGIQGDKQGELNGPCILAINSKGMVYVADFNNLRIQVFNSDDQF 533
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ F + G + +++P GVA+D Y+ V S +++ + GQF+ C +
Sbjct: 534 MFEFSTTG-DNYTMEYPVGVAIDKNDYVYV--SSRHKVTKYDSYGQFICRINC---DNNR 587
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
GVAV S+G I V D EN+ I+VF
Sbjct: 588 LSKPSGVAVCSDGKIAVVDWENYCIKVF 615
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 14/179 (7%)
Query: 142 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP 201
GQL+ P + ++ + +D N RV I D DG + F A Q P
Sbjct: 362 GQLKDPLGLTINKHGDFVTADRGNRRVVIHD-------RDGNYKESFEFTDQFAKQFT-P 413
Query: 202 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYIS 260
+A+S+ N ++D NN ++ + D NG++I FGS ++ P G+A++ +
Sbjct: 414 SDVAISDDNEYFMTDDNNKQIVVSDENGKLIRKFGS-----SEIDDPYGIAINPVTNNVY 468
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V + I+ +T G+++ + G G GE G +A+ S G + V D N RIQVF
Sbjct: 469 VSEYSKGYIRKYTQGGRYINSLGIQGDKQGELNGPCILAINSKGMVYVADFNNLRIQVF 527
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Query: 34 QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH----FDLK 89
+Y Q R +G +G + G P +A+ + VAD +N R+QV F+
Sbjct: 479 KYTQGGRYINSLGIQGDKQGELNGPCILAINSKGMVYVADFNNLRIQVFNSDDQFMFEFS 538
Query: 90 TNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
T +P G+A+ ++ + V SS H+V + S G F+ + N+ L P
Sbjct: 539 TTGDNYTMEYPVGVAIDKNDYVYV--SSRHKVTKYDSYGQFICRINCDNNR---LSKPSG 593
Query: 150 IAVSNTNRVIVSDSNNHRVQIF 171
+AV + ++ V D N+ +++F
Sbjct: 594 VAVCSDGKIAVVDWENYCIKVF 615
>gi|225175606|ref|ZP_03729600.1| NHL repeat containing protein [Dethiobacter alkaliphilus AHT 1]
gi|225168935|gb|EEG77735.1| NHL repeat containing protein [Dethiobacter alkaliphilus AHT 1]
Length = 329
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 108/225 (48%), Gaps = 16/225 (7%)
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
A P +AV D+ I + D+ N +VQVF+ G V FG G + G+ P+ I V+
Sbjct: 78 ALLKPMDVAV-VDDRIYITDTLNSQVQVFKPTGEPVLSFGGSGREPGKFSFPYGIDVAPN 136
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+ V+D N + IFD GR F ++ + G L + V N N
Sbjct: 137 GNIFVADMYNGNISIFDDYGRFLNY---FAAAEDAVVDPGGLLIKDGLLYVCNLNP---- 189
Query: 216 DSNNHRVQIFDVNGR-VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
V +FD+N +I + GSEG+ EG+L FP + G + V D+GNNRIQ++ P
Sbjct: 190 ----GSVLVFDINSEELINTIGSEGTGEGELMFPNDLTFGPDGNLYVSDTGNNRIQVYDP 245
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G F++ G G+ GV S+G + V + N++I +F
Sbjct: 246 QGSFIKTLPIDG---GDIYSPRGVGFDSHGRLHVVSKMNNQIAIF 287
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 71/177 (40%), Gaps = 45/177 (25%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
++ +G L P +AV + +R+ ++D+ N +VQ+F G + SFG G E G+
Sbjct: 68 QYSILGEGDQALLKPMDVAVVD-DRIYITDTLNSQVQVFKPTGEPVLSFGGSGREPGKFS 126
Query: 247 FPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF------------------------ 282
FP G+ V G I V D N I IF G+FL F
Sbjct: 127 FPYGIDVAPNGNIFVADMYNGNISIFDDYGRFLNYFAAAEDAVVDPGGLLIKDGLLYVCN 186
Query: 283 --------------------GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+G+GE + +GN+ V D N+RIQV+
Sbjct: 187 LNPGSVLVFDINSEELINTIGSEGTGEGELMFPNDLTFGPDGNLYVSDTGNNRIQVY 243
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 19/215 (8%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC--FPHFDLKTNCVFLAFTWP 100
G G EPG F++P GI V P+ +I VAD N + + + F A P
Sbjct: 113 LSFGGSGREPGKFSFPYGIDVAPNGNIFVADMYNGNISIFDDYGRFLNYFAAAEDAVVDP 172
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDG-TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
G+ + D + V + + V VF + + GS G G+L P+ + +
Sbjct: 173 GGLLI-KDGLLYVCNLNPGSVLVFDINSEELINTIGSEGTGEGELMFPNDLTFGPDGNLY 231
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
VSD+ N+R+Q++D G + ++ G + P + + R+ V N
Sbjct: 232 VSDTGNNRIQVYDPQGSFIK----------TLPIDGGDIYSPRGVGFDSHGRLHVVSKMN 281
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
+++ IFD N + + G + P G+A+D
Sbjct: 282 NQIAIFDSNWKKVGDVG-----DTVFNMPNGIAMD 311
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 36 LQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD-LKTNCVF 94
+ L IGS G+ G +P + GPD ++ V+D+ N+R+QV P +KT +
Sbjct: 197 INSEELINTIGSEGTGEGELMFPNDLTFGPDGNLYVSDTGNNRIQVYDPQGSFIKTLPID 256
Query: 95 LAFTW-PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
+ PRG+ + V N+++ +F S+ VG G P+ IA+
Sbjct: 257 GGDIYSPRGVGFDSHGRLHVVSKMNNQIAIFDSNWKKVGDVGDT-----VFNMPNGIAMD 311
Query: 154 N-TNRVIVSD 162
T RV V+D
Sbjct: 312 QRTRRVYVTD 321
>gi|260785666|ref|XP_002587881.1| hypothetical protein BRAFLDRAFT_87268 [Branchiostoma floridae]
gi|229273036|gb|EEN43892.1| hypothetical protein BRAFLDRAFT_87268 [Branchiostoma floridae]
Length = 714
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 115/252 (45%), Gaps = 49/252 (19%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G+ V + I VAD+ N R+QVF GTFV +F ++ GQ P +A+
Sbjct: 348 FDRPYGVTVSDEGEIFVADTRNQRIQVFTLQGTFVRQFPTV-VAGGQRMDPSDVAMDGEG 406
Query: 157 RVIV---SDSNNHRVQIFDVNGRVF--------------------------QSDGTFVG- 186
+ V ++S + VQ ++ GRV Q+ G +V
Sbjct: 407 NLWVVGEAESADFAVQ-YNKQGRVLRKFDLQESEWYRGVAVDTRRNHILIIQTTGHWVNL 465
Query: 187 --------KFGSMGNKAGQ---LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSF 235
FG++ GQ ++HP YI V ++VSD N+ V +++ N + + F
Sbjct: 466 HGEVLVFRPFGTLVRTVGQQQGMKHPQYITVDGEGNILVSDLRNNCVHVYNENRQFLFQF 525
Query: 236 GSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL 295
G EGS EGQLK PRG+ D G I V D GN R+++F G+FL+ + K
Sbjct: 526 GGEGSGEGQLKHPRGICTDRAGNIIVADYGNRRVEMFDKTGKFLKHITT------DMKEP 579
Query: 296 EGVAVMSNGNIL 307
VA+ G +L
Sbjct: 580 WAVAMAPQGQLL 591
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 39/225 (17%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG--------------RVFQ 179
FG G++ GQ + P+ + VS+ + V+D+ N R+Q+F + G R+
Sbjct: 338 FGGEGSETGQFDRPYGVTVSDEGEIFVADTRNQRIQVFTLQGTFVRQFPTVVAGGQRMDP 397
Query: 180 SDGTFVGK-------------FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
SD G+ F NK G++ + S R + D+ + + I
Sbjct: 398 SDVAMDGEGNLWVVGEAESADFAVQYNKQGRVLRKFDLQESEWYRGVAVDTRRNHILIIQ 457
Query: 227 VNGR---------VITSFGSEGSEEGQ---LKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
G V FG+ GQ +K P+ + VD +G I V D NN + ++
Sbjct: 458 TTGHWVNLHGEVLVFRPFGTLVRTVGQQQGMKHPQYITVDGEGNILVSDLRNNCVHVYNE 517
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ QFL FG GSG+G+ K G+ GNI+V D N R+++F
Sbjct: 518 NRQFLFQFGGEGSGEGQLKHPRGICTDRAGNIIVADYGNRRVEMF 562
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+FG EGSE GQ P GV V D+G I V D+ N RIQ+FT G F+R F +G G+
Sbjct: 337 TFGGEGSETGQFDRPYGVTVSDEGEIFVADTRNQRIQVFTLQGTFVRQFPTVVAG-GQRM 395
Query: 294 GLEGVAVMSNGNILV 308
VA+ GN+ V
Sbjct: 396 DPSDVAMDGEGNLWV 410
>gi|291233686|ref|XP_002736783.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 568
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
G++VG + V D NH VQ+F GT S +G P Y+A+S ++
Sbjct: 315 GVSVGGNGVTAVCDQGNHSVQLFSLYGTHQRVLQSTNFTSGFA--PRYVAISKEGYYFIT 372
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
+ +V FD N +V G K+ MGN L +RV VSD + H
Sbjct: 373 GYSIKQVAAFDKNSKVITCFGNQEFKY-PMGNDISPL----------NDRVYVSDYSAHC 421
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
++I+ +G I SFGS GS + Q PRG+ VD++G + V D N+R+Q+ P+G FL +
Sbjct: 422 IRIYTQDGGYIKSFGSHGSGKCQFANPRGMTVDNKGNVIVADYSNHRVQVCNPNGVFLFS 481
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+G +F V ++ N+ V D N+R +
Sbjct: 482 FGSKGNGYNQFNCPYDVVCDNDANMYVSDTNNNRFMKY 519
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 136/289 (47%), Gaps = 30/289 (10%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF---PHFDLKTNCVFLAF 97
L K G +GS G F G++VG + V D NH VQ+ H + + F +
Sbjct: 298 LLCKYGVKGS--GQFNNIIGVSVGGNGVTAVCDQGNHSVQLFSLYGTHQRVLQSTNFTSG 355
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN- 156
PR +A+ + + S +V F + + FG+ + ++P +S N
Sbjct: 356 FAPRYVAISKEGYYFITGYSIKQVAAFDKNSKVITCFGNQ-----EFKYPMGNDISPLND 410
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
RV VSD + H + R++ DG ++ FGS G+ Q +P + V N VIV+D
Sbjct: 411 RVYVSDYSAHCI-------RIYTQDGGYIKSFGSHGSGKCQFANPRGMTVDNKGNVIVAD 463
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+NHRVQ+ + NG + SFGS+G+ Q P V D+ + V D+ NNR + G
Sbjct: 464 YSNHRVQVCNPNGVFLFSFGSKGNGYNQFNCPYDVVCDNDANMYVSDTNNNRFMKYDSHG 523
Query: 277 QFLRAFGCWGSGDGEFKGLE---GVAVMSN---GNILVCDRENHRIQVF 319
F+ D + L G++V ++ G+++V +E++ I+VF
Sbjct: 524 VFVSRI------DNDQNALRIPVGISVTNDKPFGHVVVASQEDNCIKVF 566
>gi|171060792|ref|YP_001793141.1| NHL repeat-containing protein [Leptothrix cholodnii SP-6]
gi|170778237|gb|ACB36376.1| NHL repeat containing protein [Leptothrix cholodnii SP-6]
Length = 359
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 115/225 (51%), Gaps = 15/225 (6%)
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV- 152
L F P G+A+GP+ + VAD+ V + G +G G GQL+ P +A
Sbjct: 139 LLNFVAPSGLALGPNGELWVADAELGFVARLDAKGEPLGVIGR-----GQLQRPTGLARD 193
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
+ + + V+D+ H+V++FD G + G G AG+ P ++A+++ ++
Sbjct: 194 TASGWLYVADTYAHQVKVFDAAGALQHV-------IGQRGEGAGEFNFPTHLALAD-GKL 245
Query: 213 IVSDSNNHRVQIFDVNGRVIT-SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
V+D+ N+RVQ+F G + FGS G G L P+GVAVD +G + V +S + + +
Sbjct: 246 YVTDTLNNRVQVFSAAGEPLPGQFGSRGLVLGNLVRPKGVAVDSEGRVYVVESYYDSLLV 305
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
++P G+FL G+ G F GV V ++ + V D N R+
Sbjct: 306 YSPSGEFLLPISGGGTAIGRFYLPAGVWVDTSDQVFVADMFNGRV 350
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 16/233 (6%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----AF 97
+ ++ R + F P G+A+GP+ + VAD+ V D K + +
Sbjct: 129 ELQLWERAAGLLNFVAPSGLALGPNGELWVADAELGFVA----RLDAKGEPLGVIGRGQL 184
Query: 98 TWPRGIAVGPDNS-IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
P G+A + + VAD+ H+V+VF + G G G AG+ P ++A+++
Sbjct: 185 QRPTGLARDTASGWLYVADTYAHQVKVFDAAGALQHVIGQRGEGAGEFNFPTHLALAD-G 243
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++ V+D+ N+RVQ+F G G+FGS G G L P +AV + RV V +
Sbjct: 244 KLYVTDTLNNRVQVFSAAGE------PLPGQFGSRGLVLGNLVRPKGVAVDSEGRVYVVE 297
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
S + ++ +G + G+ G+ P GV VD + V D N R+
Sbjct: 298 SYYDSLLVYSPSGEFLLPISGGGTAIGRFYLPAGVWVDTSDQVFVADMFNGRV 350
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 20/180 (11%)
Query: 144 LEHPHYIAVSNTN-RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH-- 200
L+ P + T R+ VSD++ V +FD G G+ AG L
Sbjct: 95 LQRPSALIGDETRGRLYVSDTSRQAVFVFDEKG----------GELQLWERAAGLLNFVA 144
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYI 259
P +A+ + V+D+ V D G + G GQL+ P G+A D G++
Sbjct: 145 PSGLALGPNGELWVADAELGFVARLDAKGEPLGVIG-----RGQLQRPTGLARDTASGWL 199
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V D+ +++++F G G G G GEF +A +++G + V D N+R+QVF
Sbjct: 200 YVADTYAHQVKVFDAAGALQHVIGQRGEGAGEFNFPTHLA-LADGKLYVTDTLNNRVQVF 258
>gi|260832800|ref|XP_002611345.1| hypothetical protein BRAFLDRAFT_211053 [Branchiostoma floridae]
gi|229296716|gb|EEN67355.1| hypothetical protein BRAFLDRAFT_211053 [Branchiostoma floridae]
Length = 220
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F +P +AV + IVV D N R+Q DG+F GK + G +A
Sbjct: 10 FDYPTSLAVTAEGDIVVTDHDNSRLQFLDKDGSFKGKVTGAAQRGGATRG---VADDGLG 66
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
R+IV+ HRV + +G V KFG G QL + V+++N++IVSD
Sbjct: 67 RIIVT--IEHRVFVLSPSGDVML-------KFGDKGQGQQQLGSYLRVTVNSSNQIIVSD 117
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+NH V++FD GR + + GS G GQL+ P V D + I V D GN+R+ +F+ DG
Sbjct: 118 YSNHNVKVFDPTGRHLFTCGSHGRGPGQLENPETVITDSEDNIIVADFGNDRVSMFSRDG 177
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
F+R G ++ L G+A+ +G+ +V +
Sbjct: 178 TFIRHV-LTRKEHGLYRPL-GLALTHDGHFVVSE 209
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 102/220 (46%), Gaps = 13/220 (5%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT--WPRGI 103
G RG G F +P +AV + IVV D N R+Q K A RG+
Sbjct: 1 GERGGGDGQFDYPTSLAVTAEGDIVVTDHDNSRLQFLDKDGSFKGKVTGAAQRGGATRGV 60
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 163
A I+V + HRV V G + KFG G QL + V+++N++IVSD
Sbjct: 61 ADDGLGRIIV--TIEHRVFVLSPSGDVMLKFGDKGQGQQQLGSYLRVTVNSSNQIIVSDY 118
Query: 164 NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
+NH V++FD GR + GS G GQLE+P + + + +IV+D N RV
Sbjct: 119 SNHNVKVFDPTGRHLFT-------CGSHGRGPGQLENPETVITDSEDNIIVADFGNDRVS 171
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
+F +G I + +E L P G+A+ G+ V +
Sbjct: 172 MFSRDGTFIRHVLTR--KEHGLYRPLGLALTHDGHFVVSE 209
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 87/185 (47%), Gaps = 12/185 (6%)
Query: 135 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK 194
G G GQ ++P +AV+ ++V+D +N R+Q D DG+F GK +
Sbjct: 1 GERGGGDGQFDYPTSLAVTAEGDIVVTDHDNSRLQFLD-------KDGSFKGKVTGAAQR 53
Query: 195 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
G +A R+IV+ HRV + +G V+ FG +G + QL V V+
Sbjct: 54 GGATRG---VADDGLGRIIVT--IEHRVFVLSPSGDVMLKFGDKGQGQQQLGSYLRVTVN 108
Query: 255 DQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
I V D N+ +++F P G+ L G G G G+ + E V S NI+V D N
Sbjct: 109 SSNQIIVSDYSNHNVKVFDPTGRHLFTCGSHGRGPGQLENPETVITDSEDNIIVADFGND 168
Query: 315 RIQVF 319
R+ +F
Sbjct: 169 RVSMF 173
>gi|260823284|ref|XP_002604113.1| hypothetical protein BRAFLDRAFT_71599 [Branchiostoma floridae]
gi|229289438|gb|EEN60124.1| hypothetical protein BRAFLDRAFT_71599 [Branchiostoma floridae]
Length = 431
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 142/300 (47%), Gaps = 37/300 (12%)
Query: 33 SQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC 92
+Q Q +R+ F G GSE G P G+ V + + VAD N R QV F L+
Sbjct: 156 NQTHQLQRMTF--GGLGSETGQINCPYGVTVSDEGEVFVADRWNQRNQV----FTLQGTF 209
Query: 93 VFLAFT--------WPRGIAVGPDNSIVVADSSN--HRVQVFQSDGTFVGKFGSMGNKAG 142
V T P +A+ + ++ V ++ H + G +GKF K G
Sbjct: 210 VRQFPTVVSGEEKMKPHDVAIDEEGNLWVVGETDFAHFAVQYNKQGRVLGKFDL--QKTG 267
Query: 143 QLEHPHYIAV-SNTNRVIVSDSNNHRVQIFDVNGRV--FQSDGTFVGKFGSMGNKAGQLE 199
+AV + N ++++ + +F+ +G V F+ DGT V ++G + G ++
Sbjct: 268 WCRG---VAVDTRRNHILITQTTG---DLFNPHGEVLVFRPDGTLVR---TVGQQQG-MK 317
Query: 200 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYI 259
+P Y+ V +++VSD NH V ++ +G+ + FGS GS EG LK P G+ D G I
Sbjct: 318 YPWYVTVDEEGKILVSDCGNHCVYVYKEDGQFLFQFGSSGSGEGPLKHPHGICTDRAGNI 377
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V + GN R+++F G+FL+ + + VA+ G ++V D + H++ +
Sbjct: 378 IVANYGNRRVEMFDKTGKFLKRIAT------DMMEPQAVAMAPQGQLVVTDIKEHKVSIL 431
>gi|358635397|dbj|BAL22694.1| hypothetical protein AZKH_0348 [Azoarcus sp. KH32C]
Length = 385
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 128/287 (44%), Gaps = 31/287 (10%)
Query: 49 GSEPGCF-TWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------AFTWP 100
S G F T P +AV I V+D++ H V+V FD+ + F P
Sbjct: 92 ASRAGYFLTKPYAVAVH-KGRIFVSDTAEHAVKV----FDIPSGKYFTIGDTEPATLAKP 146
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT-NRVI 159
G+ V + VAD++ + +F DG F+ K G GN + + V + R+
Sbjct: 147 LGLDVDRAGRLYVADATLKMIFIFDRDGKFLRKIG--GNNL--FDRISSVTVDPSGRRIY 202
Query: 160 VSD-----SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
V D S NHR+++FD G V G G+ G+ P +A+ R+ V
Sbjct: 203 VVDIGGVKSENHRIRVFDT------VTGQHVMDIGKRGSGPGEFNLPRDMAIGKDGRLYV 256
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
D N RVQIF+ +G SFGS G + G P+ +A D++G + V D+ QIF
Sbjct: 257 VDGGNFRVQIFNADGSYRDSFGSVGRQLGNFARPKEIATDNEGNVYVADAAFGNFQIFNA 316
Query: 275 DGQFLRAFGCWGS--GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
DG+ L G G E+ G+AV +G I D+ +I VF
Sbjct: 317 DGELLMFIGNRSERGGPAEYILPSGIAVDDDGRIYFVDQWFAKIDVF 363
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 108/248 (43%), Gaps = 31/248 (12%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------- 95
F IG +EP P G+ V + VAD++ + F + FL
Sbjct: 133 FTIGD--TEPATLAKPLGLDVDRAGRLYVADATLKMI------FIFDRDGKFLRKIGGNN 184
Query: 96 AFTWPRGIAVGPD-NSIVVAD-----SSNHRVQVFQS-DGTFVGKFGSMGNKAGQLEHPH 148
F + V P I V D S NHR++VF + G V G G+ G+ P
Sbjct: 185 LFDRISSVTVDPSGRRIYVVDIGGVKSENHRIRVFDTVTGQHVMDIGKRGSGPGEFNLPR 244
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 208
+A+ R+ V D N RVQIF+ +DG++ FGS+G + G P IA N
Sbjct: 245 DMAIGKDGRLYVVDGGNFRVQIFN-------ADGSYRDSFGSVGRQLGNFARPKEIATDN 297
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF--PRGVAVDDQGYISVGDSGN 266
V V+D+ QIF+ +G ++ G+ G ++ P G+AVDD G I D
Sbjct: 298 EGNVYVADAAFGNFQIFNADGELLMFIGNRSERGGPAEYILPSGIAVDDDGRIYFVDQWF 357
Query: 267 NRIQIFTP 274
+I +F P
Sbjct: 358 AKIDVFRP 365
>gi|291240839|ref|XP_002740327.1| PREDICTED: tripartite motif-containing 3-like [Saccoglossus
kowalevskii]
Length = 650
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 137/290 (47%), Gaps = 29/290 (10%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+L+ +G +G+E F P G+++ IVVADS N RVQV + K+ F ++
Sbjct: 379 KLEKTMGGQGTEQEMFDVPLGVSINTCGDIVVADSKNERVQVIDNYGRPKSQLQFTEYSK 438
Query: 100 PR---GIAVGPDNSIVVADSS------NHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
P +AV DN+ + D + N +V V G + FG QL +P I
Sbjct: 439 PVIPIDVAVSVDNTYFITDGTWEGNRGNSQVIVCNQYGKVIQCFGKT-----QLHNPRGI 493
Query: 151 AVSNTNRVI-VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
A+++ N VI V D+ H ++++ + D +++ GS G Q +P +I ++
Sbjct: 494 AINHNNGVIYVVDNGAHCIKLYKI------EDYSYIKSLGSWGQGPCQFIYPQFITTNSE 547
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
+IVSD R+Q+ +G + +F + +PRG+ D I V D G +R+
Sbjct: 548 GCLIVSDGRYGRIQVLTSDGVFMFAFSCCSNT---FDWPRGITTDKNDNIYVND-GKHRV 603
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
Q+F G+F+ SG G+A+ +G ++V D N +++F
Sbjct: 604 QMFNSKGEFITNI---ASGSDVLNSPRGIAITDDGKVVVTDCTN-SVKIF 649
>gi|260823286|ref|XP_002604114.1| hypothetical protein BRAFLDRAFT_71598 [Branchiostoma floridae]
gi|229289439|gb|EEN60125.1| hypothetical protein BRAFLDRAFT_71598 [Branchiostoma floridae]
Length = 492
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 10/143 (6%)
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
V DGT V ++G + G + HP YI V ++VSD NNH V +++ GR + FG
Sbjct: 355 VSDEDGTLVR---TVGQQQGMM-HPWYITVDGEGNILVSDQNNHCVYVYNTGGRFLFQFG 410
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
GS EGQLK P+G+ D G I V DSGN+R+++F GQFL+ + K +
Sbjct: 411 GHGSGEGQLKRPQGICTDRAGNIIVADSGNSRVEMFDKTGQFLKHIAT------DMKKPQ 464
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
VA+ + G ++V D HR+ +F
Sbjct: 465 AVAIATQGQLVVSDSGEHRVSIF 487
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 13/126 (10%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P I V + +I+V+D +NH V V+ + G F+ +FG G+ GQL+ P I +I
Sbjct: 375 PWYITVDGEGNILVSDQNNHCVYVYNTGGRFLFQFGGHGSGEGQLKRPQGICTDRAGNII 434
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+DS N RV++FD G+ + T + K P +A++ +++VSDS
Sbjct: 435 VADSGNSRVEMFDKTGQFLKHIATDMKK-------------PQAVAIATQGQLVVSDSGE 481
Query: 220 HRVQIF 225
HRV IF
Sbjct: 482 HRVSIF 487
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 23/125 (18%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-----------AFTWPRGIAVG 106
P I V + +I+V+D +NH V V T FL P+GI
Sbjct: 375 PWYITVDGEGNILVSDQNNHCVYV------YNTGGRFLFQFGGHGSGEGQLKRPQGICTD 428
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
+I+VADS N RV++F G F+ A ++ P +A++ +++VSDS H
Sbjct: 429 RAGNIIVADSGNSRVEMFDKTGQFLKHI------ATDMKKPQAVAIATQGQLVVSDSGEH 482
Query: 167 RVQIF 171
RV IF
Sbjct: 483 RVSIF 487
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
R F+ G GS G P+GI +I+VADS N RV++ F +
Sbjct: 404 RFLFQFGGHGSGEGQLKRPQGICTDRAGNIIVADSGNSRVEM-FDKTGQFLKHIATDMKK 462
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+ +A+ +VV+DS HRV +FQ
Sbjct: 463 PQAVAIATQGQLVVSDSGEHRVSIFQ 488
>gi|116749588|ref|YP_846275.1| NHL repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116698652|gb|ABK17840.1| NHL repeat containing protein [Syntrophobacter fumaroxidans MPOB]
Length = 1750
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 138/309 (44%), Gaps = 56/309 (18%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------------------FTW 99
P +AV N+I +AD+ +HR++ D N V +A
Sbjct: 320 PVALAVDSQNNIYIADTYSHRIR----RVDAAGNIVTVAGKGVPGNAGDGGQAVAAILKS 375
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKA----------GQLEHPHY 149
P G+A+GPDNS+ +AD ++HRV+ + G + G + L+ P
Sbjct: 376 PHGLALGPDNSLYIADRTDHRVRKVTAAG-VISTLAGTGEEGLSADGAAAAFANLDGPCA 434
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKF-GSMGNKA-GQLEHPHYIAVS 207
+AV + V SDS ++RV+ ++G + G V + G G A +L +P IAV
Sbjct: 435 VAVGPSGSVYFSDSGSNRVRKIGLDGNLSTVAGKGVAGYSGDDGPAAEARLNNPSAIAVD 494
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGS---------EGSEEGQLKFPRGVAVDDQGY 258
+ + ++D+NNHR++ D G + T G+ + L FP GVAVD G
Sbjct: 495 GSESIYIADTNNHRIRKVDGGGTITTVAGNGTPGYSGDGASATAASLNFPNGVAVDADGN 554
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWG----SGDG------EFKGLEGVAVMSNGNILV 308
+ + D+ N+R+++ D + G SGDG K GV V + G + +
Sbjct: 555 VFIADTSNHRVRMV--DSGVITTVAGNGTPGYSGDGGAAVSASLKAPHGVWVDATGALYI 612
Query: 309 CDRENHRIQ 317
D N+R++
Sbjct: 613 ADAHNYRVR 621
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 46/304 (15%)
Query: 60 GIAVGPDNSIVVADSSNHRVQVCFP-------------HFDLKTNCVFLAFTWPRGIAVG 106
G+A+GP+N + +AD+ N R++ + P +AV
Sbjct: 267 GVALGPNNDLYIADTYNQRIRKVTDGVINTVAGTGYGGSLEDGIPATGARLKSPVALAVD 326
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFV-----GKFGSMGNK----AGQLEHPHYIAVSNTNR 157
N+I +AD+ +HR++ + G V G G+ G+ A L+ PH +A+ N
Sbjct: 327 SQNNIYIADTYSHRIRRVDAAGNIVTVAGKGVPGNAGDGGQAVAAILKSPHGLALGPDNS 386
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG----SMGNKAGQLEHPHYIAVSNTNRVI 213
+ ++D +HRV+ G + GT G+ G L+ P +AV + V
Sbjct: 387 LYIADRTDHRVRKVTAAGVISTLAGT--GEEGLSADGAAAAFANLDGPCAVAVGPSGSVY 444
Query: 214 VSDSNNHRVQIFDVNGRVITSFGS--------EG-SEEGQLKFPRGVAVDDQGYISVGDS 264
SDS ++RV+ ++G + T G +G + E +L P +AVD I + D+
Sbjct: 445 FSDSGSNRVRKIGLDGNLSTVAGKGVAGYSGDDGPAAEARLNNPSAIAVDGSESIYIADT 504
Query: 265 GNNRIQIFTPDGQFLRAFGCWG---SGDGEFKGLE------GVAVMSNGNILVCDRENHR 315
N+RI+ G G SGDG GVAV ++GN+ + D NHR
Sbjct: 505 NNHRIRKVDGGGTITTVAGNGTPGYSGDGASATAASLNFPNGVAVDADGNVFIADTSNHR 564
Query: 316 IQVF 319
+++
Sbjct: 565 VRMV 568
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 134/307 (43%), Gaps = 52/307 (16%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT------------------W 99
PRGIAV ++ ADS+NH C D +A T +
Sbjct: 97 PRGIAVDAAGNVYFADSNNH----CIRKIDTSGIITTVAGTGSAGSNGDGGPAASARLAY 152
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGT--------FVGKFGSMG--NKAGQLEHPHY 149
P GIAV P +I VAD NH+V+ + G + + G G +AG L P
Sbjct: 153 PFGIAVDPSGNIYVADLGNHKVRRIDAAGNISTVAGTGLLSRLGDGGPATEAG-LTSPTG 211
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA--GQLEHPHYIAVS 207
+AV + + +SDS H ++ DV G + + G + ++ G A L + + +A+
Sbjct: 212 VAVDGSGNLFISDSGRHVIRRVDVGGTIDRVAGDYEQRYHGDGGPALSAGLMNAYGVALG 271
Query: 208 NTNRVIVSDSNNHRV-QIFDVNGRVITSFGSEGSEE-------GQLKFPRGVAVDDQGYI 259
N + ++D+ N R+ ++ D + G GS E +LK P +AVD Q I
Sbjct: 272 PNNDLYIADTYNQRIRKVTDGVINTVAGTGYGGSLEDGIPATGARLKSPVALAVDSQNNI 331
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFG---CWGSGDGE------FKGLEGVAVMSNGNILVCD 310
+ D+ ++RI+ G + G +GDG K G+A+ + ++ + D
Sbjct: 332 YIADTYSHRIRRVDAAGNIVTVAGKGVPGNAGDGGQAVAAILKSPHGLALGPDNSLYIAD 391
Query: 311 RENHRIQ 317
R +HR++
Sbjct: 392 RTDHRVR 398
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 88/195 (45%), Gaps = 21/195 (10%)
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQS--DGTFVGKFGSMGNKA-GQLEH 200
L+ P +AV + V +SD+NNHR++ DV Q+ G G G G A L
Sbjct: 37 LDSPSGVAVDTSGNVYLSDTNNHRIRKLDVAAGQIQTLAGGQSPGYSGDGGTAAKAGLNR 96
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT-----SFGSEG----SEEGQLKFPRGV 251
P IAV V +DSNNH ++ D +G + T S GS G + +L +P G+
Sbjct: 97 PRGIAVDAAGNVYFADSNNHCIRKIDTSGIITTVAGTGSAGSNGDGGPAASARLAYPFGI 156
Query: 252 AVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGC-----WGSG----DGEFKGLEGVAVMS 302
AVD G I V D GN++++ G G G G + GVAV
Sbjct: 157 AVDPSGNIYVADLGNHKVRRIDAAGNISTVAGTGLLSRLGDGGPATEAGLTSPTGVAVDG 216
Query: 303 NGNILVCDRENHRIQ 317
+GN+ + D H I+
Sbjct: 217 SGNLFISDSGRHVIR 231
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 129/305 (42%), Gaps = 47/305 (15%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVC--------------FPHFDLKTNCVFLA-FTWPRG 102
P G+AV ++ ++D++NHR++ P + A PRG
Sbjct: 40 PSGVAVDTSGNVYLSDTNNHRIRKLDVAAGQIQTLAGGQSPGYSGDGGTAAKAGLNRPRG 99
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDG--TFVGKFGSMGN-------KAGQLEHPHYIAVS 153
IAV ++ ADS+NH ++ + G T V GS G+ + +L +P IAV
Sbjct: 100 IAVDAAGNVYFADSNNHCIRKIDTSGIITTVAGTGSAGSNGDGGPAASARLAYPFGIAVD 159
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGT-FVGKFGSMG--NKAGQLEHPHYIAVSNTN 210
+ + V+D NH+V+ D G + GT + + G G +AG L P +AV +
Sbjct: 160 PSGNIYVADLGNHKVRRIDAAGNISTVAGTGLLSRLGDGGPATEAG-LTSPTGVAVDGSG 218
Query: 211 RVIVSDSNNHRVQIFDVNG---RVITSFGSEGSEEG------QLKFPRGVAVDDQGYISV 261
+ +SDS H ++ DV G RV + +G L GVA+ + +
Sbjct: 219 NLFISDSGRHVIRRVDVGGTIDRVAGDYEQRYHGDGGPALSAGLMNAYGVALGPNNDLYI 278
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSGDGE---------FKGLEGVAVMSNGNILVCDRE 312
D+ N RI+ T DG G G E K +AV S NI + D
Sbjct: 279 ADTYNQRIRKVT-DGVINTVAGTGYGGSLEDGIPATGARLKSPVALAVDSQNNIYIADTY 337
Query: 313 NHRIQ 317
+HRI+
Sbjct: 338 SHRIR 342
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 127/307 (41%), Gaps = 46/307 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT--------------NCVFLAFTWP 100
+P GIAV P +I VAD NH+V+ ++ T T P
Sbjct: 150 LAYPFGIAVDPSGNIYVADLGNHKVRRIDAAGNISTVAGTGLLSRLGDGGPATEAGLTSP 209
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTF---VGKF-------GSMGNKAGQLEHPHYI 150
G+AV ++ ++DS H ++ GT G + G AG L + + +
Sbjct: 210 TGVAVDGSGNLFISDSGRHVIRRVDVGGTIDRVAGDYEQRYHGDGGPALSAG-LMNAYGV 268
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA--GQLEHPHYIAVSN 208
A+ N + ++D+ N R++ +G + GT G G A +L+ P +AV +
Sbjct: 269 ALGPNNDLYIADTYNQRIRKV-TDGVINTVAGTGYGGSLEDGIPATGARLKSPVALAVDS 327
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGS----EGSEEGQ-----LKFPRGVAVDDQGYI 259
N + ++D+ +HR++ D G ++T G + GQ LK P G+A+ +
Sbjct: 328 QNNIYIADTYSHRIRRVDAAGNIVTVAGKGVPGNAGDGGQAVAAILKSPHGLALGPDNSL 387
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFGCWGSG---------DGEFKGLEGVAVMSNGNILVCD 310
+ D ++R++ T G G G G VAV +G++ D
Sbjct: 388 YIADRTDHRVRKVTAAGVISTLAGTGEEGLSADGAAAAFANLDGPCAVAVGPSGSVYFSD 447
Query: 311 RENHRIQ 317
++R++
Sbjct: 448 SGSNRVR 454
>gi|260817402|ref|XP_002603576.1| hypothetical protein BRAFLDRAFT_93221 [Branchiostoma floridae]
gi|229288895|gb|EEN59587.1| hypothetical protein BRAFLDRAFT_93221 [Branchiostoma floridae]
Length = 757
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 141/307 (45%), Gaps = 50/307 (16%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRG 102
K G G +PG F PRG+ V P+N I +AD N+RVQV H + + G
Sbjct: 468 IKFGGYGKDPGKFAAPRGVTVSPNNEIFIADMKNNRVQV---HNIRGDHLLQFPAVVSGG 524
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ--LEHPHY----IAVS-NT 155
+ P + + D+S H ++ + K+ G + L++ Y +AV +
Sbjct: 525 GTIRPQD--IAMDNSGH---LWVVGRNVLVKYTREGKVLQEVPLQNIGYRYRGVAVDRRS 579
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG--NKAG----------------- 196
+V+V +S+ R ++ VF+ DG+ V +FG G ++A
Sbjct: 580 GQVLVVESDTQRAEVL-----VFRPDGSLVRRFGHQGIFDRASRWLRASAAVDISANISR 634
Query: 197 -QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD 255
++E P +I V +I+SD V +FD GR++ +FG S EGQL+ P G+ D
Sbjct: 635 WKMEDPGFITVHEEGNIIISDWGAASVFVFDQIGRLLYTFGGPESREGQLRLPCGICTDS 694
Query: 256 QGYISVGDSGNNRIQIFTPDGQFLRAFGC---WGSGDGEFKGLEGVAVMSNGNILVCDRE 312
G I V D GN R++ FT + LR +GS D GVAV G+++V E
Sbjct: 695 SGNIIVADFGNGRLEQFTSRAEHLRHIDITKRYGSPD-------GVAVGPMGHLVVTYVE 747
Query: 313 NHRIQVF 319
+ + VF
Sbjct: 748 QNAVAVF 754
>gi|317125005|ref|YP_004099117.1| NHL repeat containing protein [Intrasporangium calvum DSM 43043]
gi|315589093|gb|ADU48390.1| NHL repeat containing protein [Intrasporangium calvum DSM 43043]
Length = 361
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 131/280 (46%), Gaps = 33/280 (11%)
Query: 58 PRGIAVGPDNS-IVVADSSNHRVQVCFPHF-----DLKTNCVFLAFTWPRGIAVGPDN-S 110
P G+AV PD S I V S + +L+ P +AV P
Sbjct: 95 PLGVAVSPDGSRIYVTQSGTEGAAFVYDRDGKRLGELRPPATDKGPHVPVYVAVNPTTGE 154
Query: 111 IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN-----N 165
+ V D + +V V+ G + F K P I VS + V+D++ +
Sbjct: 155 VYVGDRAAGKVYVYSGAGAYRSTFTPKDKKL--TFSPLGIGVSGDGTLYVADASSSEPKD 212
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
HR+ + +GR+ ++ +GK G+L +P+ I + V+DSNN RV +F
Sbjct: 213 HRILVLAGDGRLVKT----LGK--------GELNYPNAIVPGPQGEIYVTDSNNGRVVVF 260
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ------FL 279
+ +G +T S G +G L PRG+A+DDQG + V D+ + ++++FT + ++
Sbjct: 261 EASG-TMTPLLSRGIGDGDLGLPRGLALDDQGRLFVVDTTDQQVRVFTAAAKPTDHPTYV 319
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+FG G D F GVA + G + V DREN+RIQV+
Sbjct: 320 GSFGDQGREDATFLFPNGVATDTRGRVYVADRENNRIQVW 359
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWPRGIAVGP 107
G +P I GP I V DS+N RV V F T + PRG+A+
Sbjct: 231 GELNYPNAIVPGPQGEIYVTDSNNGRV-VVFEASGTMTPLLSRGIGDGDLGLPRGLALDD 289
Query: 108 DNSIVVADSSNHRVQVFQSDG------TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
+ V D+++ +V+VF + T+VG FG G + P+ +A RV V+
Sbjct: 290 QGRLFVVDTTDQQVRVFTAAAKPTDHPTYVGSFGDQGREDATFLFPNGVATDTRGRVYVA 349
Query: 162 DSNNHRVQIF 171
D N+R+Q++
Sbjct: 350 DRENNRIQVW 359
>gi|260785758|ref|XP_002587927.1| hypothetical protein BRAFLDRAFT_87315 [Branchiostoma floridae]
gi|229273082|gb|EEN43938.1| hypothetical protein BRAFLDRAFT_87315 [Branchiostoma floridae]
Length = 791
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 103/197 (52%), Gaps = 21/197 (10%)
Query: 117 SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY---IAVS-NTNRVIVSDSNNHRVQIFD 172
+ H V + +DGT + +F +L+ H IAV+ TN ++V+D++ V +F
Sbjct: 606 TAHHVVQYSTDGTAMARF--------ELKKSHNYRGIAVNMRTNHILVTDADQVEVHMF- 656
Query: 173 VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
+ DG+ V ++ ++ P Y+ V ++VSD N V ++D +G+ +
Sbjct: 657 ------RPDGSLVRTVRHPRDR--EMTRPTYVTVDGEGNILVSDWNKDSVYVYDESGKFL 708
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
FG GS EGQ+K+P G+ D G+I V D GN R+QIFT G+F+R F W +G
Sbjct: 709 FQFGGWGSGEGQMKWPHGICTDGSGHILVADHGNERVQIFTRHGEFVRTFRTWFKPEGLA 768
Query: 293 KGLEGVAVMSNGNILVC 309
G EG V+++ + L
Sbjct: 769 VGPEGQLVVTSWSFLTV 785
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 14/146 (9%)
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHY---IAVS-NTNRVIVSDSNNHRVQIFDVNGRVIT 233
+ +DGT + +F +L+ H IAV+ TN ++V+D++ V +F +G ++
Sbjct: 613 YSTDGTAMARF--------ELKKSHNYRGIAVNMRTNHILVTDADQVEVHMFRPDGSLVR 664
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+ E + P V VD +G I V D + + ++ G+FL FG WGSG+G+ K
Sbjct: 665 TVRHPRDRE--MTRPTYVTVDGEGNILVSDWNKDSVYVYDESGKFLFQFGGWGSGEGQMK 722
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ +G+ILV D N R+Q+F
Sbjct: 723 WPHGICTDGSGHILVADHGNERVQIF 748
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 59 RGIAVG-PDNSIVVADSSNHRVQVCFPHFDLKTNCVF---LAFTWPRGIAVGPDNSIVVA 114
RGIAV N I+V D+ V + P L T P + V + +I+V+
Sbjct: 632 RGIAVNMRTNHILVTDADQVEVHMFRPDGSLVRTVRHPRDREMTRPTYVTVDGEGNILVS 691
Query: 115 DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 174
D + V V+ G F+ +FG G+ GQ++ PH I + ++V+D N RVQIF +
Sbjct: 692 DWNKDSVYVYDESGKFLFQFGGWGSGEGQMKWPHGICTDGSGHILVADHGNERVQIFTRH 751
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQL 198
G ++ T+ G GQL
Sbjct: 752 GEFVRTFRTWFKPEGLAVGPEGQL 775
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G GS G WP GI I+VAD N RVQ+ H + V
Sbjct: 701 YDESGKFLFQFGGWGSGEGQMKWPHGICTDGSGHILVADHGNERVQIFTRHGEF----VR 756
Query: 95 LAFTW--PRGIAVGPDNSIVVADSSNHRVQVF 124
TW P G+AVGP+ +VV S V VF
Sbjct: 757 TFRTWFKPEGLAVGPEGQLVVTSWSFLTVTVF 788
>gi|260818150|ref|XP_002603947.1| hypothetical protein BRAFLDRAFT_102371 [Branchiostoma floridae]
gi|229289272|gb|EEN59958.1| hypothetical protein BRAFLDRAFT_102371 [Branchiostoma floridae]
Length = 579
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 118/273 (43%), Gaps = 61/273 (22%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV---- 152
F +P G+ V + I VAD N R+QVF G FV +F ++ GQ PH +A+
Sbjct: 315 FWYPVGVTVSDEGEIFVADRENQRIQVFTLQGAFVRQFPTV-VAGGQKMDPHDVAMDGVG 373
Query: 153 ------------SNTNRVIVSDSNNHR-VQIFDVNGRV---------------------- 177
+++ V S R +++FD+ V
Sbjct: 374 SLWGVGNLWVGGTDSAEFAVQYSKEGRMLRMFDLQAAVGYRGVAVDTRMNHILITQITEC 433
Query: 178 -----------FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
F+ DGT V ++G + G ++HP YI V ++VSD NHRV +++
Sbjct: 434 GPFHLHGEVLVFRPDGTLVR---TVGRQQG-MKHPRYITVDGEGNILVSDCENHRVYVYN 489
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+G + FG EGS EGQLK P G+ D G I V D R+++F G+FLR
Sbjct: 490 EDGEFLFQFGGEGSGEGQLKGPLGIGTDKAGNIIVADKVKGRVEMFDNKGKFLRHIIT-- 547
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
E VA+ + G ++V D I +F
Sbjct: 548 ----ETDNPCAVAMATQGQLVVTDGVKRTISIF 576
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 13/126 (10%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PR + VG + +I+V+D NHRV V++ DG F+ +FG G+ GQL HPH I +I
Sbjct: 4 PRFLTVGSEGNILVSDCDNHRVYVYKEDGEFLFRFGGKGSGDGQLNHPHGICTDRAGNII 63
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D N RV++FD G+ + + + PH +A++ +++V++ N
Sbjct: 64 VADWGNMRVEMFDKTGKFLK-------------HIVKNMRWPHAVAIATQGQLVVNNVKN 110
Query: 220 HRVQIF 225
V IF
Sbjct: 111 QTVSIF 116
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 47/232 (20%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG---RVFQS---------- 180
FG G+ GQ +P + VS+ + V+D N R+Q+F + G R F +
Sbjct: 305 FGEGGSGTGQFWYPVGVTVSDEGEIFVADRENQRIQVFTLQGAFVRQFPTVVAGGQKMDP 364
Query: 181 -------------------DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
GT +F +K G++ + + R + D+ +
Sbjct: 365 HDVAMDGVGSLWGVGNLWVGGTDSAEFAVQYSKEGRMLRMFDLQAAVGYRGVAVDTRMNH 424
Query: 222 VQI--------FDVNGRVI------TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+ I F ++G V+ T + G ++G +K PR + VD +G I V D N+
Sbjct: 425 ILITQITECGPFHLHGEVLVFRPDGTLVRTVGRQQG-MKHPRYITVDGEGNILVSDCENH 483
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
R+ ++ DG+FL FG GSG+G+ KG G+ GNI+V D+ R+++F
Sbjct: 484 RVYVYNEDGEFLFQFGGEGSGEGQLKGPLGIGTDKAGNIIVADKVKGRVEMF 535
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 13/129 (10%)
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
++ P ++ V + ++VSD +NHRV V++ DG F+ +FG G+ GQL HPH
Sbjct: 1 MKLPRFLTVGSEGNILVSDCDNHRV-------YVYKEDGEFLFRFGGKGSGDGQLNHPHG 53
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
I +IV+D N RV++FD G+ + +++P VA+ QG + V +
Sbjct: 54 ICTDRAGNIIVADWGNMRVEMFDKTGKFLKHIVK------NMRWPHAVAIATQGQLVVNN 107
Query: 264 SGNNRIQIF 272
N + IF
Sbjct: 108 VKNQTVSIF 116
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
++ P ++ V + ++VSD +NHRV ++ +G + FG +GS +GQL P G+ D G
Sbjct: 1 MKLPRFLTVGSEGNILVSDCDNHRVYVYKEDGEFLFRFGGKGSGDGQLNHPHGICTDRAG 60
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN R+++F G+FL+ + VA+ + G ++V + +N +
Sbjct: 61 NIIVADWGNMRVEMFDKTGKFLKHI------VKNMRWPHAVAIATQGQLVVNNVKNQTVS 114
Query: 318 VF 319
+F
Sbjct: 115 IF 116
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 24/143 (16%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-----------AFTWPRGIAVG 106
PR + VG + +I+V+D NHRV V K + FL P GI
Sbjct: 4 PRFLTVGSEGNILVSDCDNHRVYV------YKEDGEFLFRFGGKGSGDGQLNHPHGICTD 57
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
+I+VAD N RV++F G F + + + PH +A++ +++V++ N
Sbjct: 58 RAGNIIVADWGNMRVEMFDKTGKF------LKHIVKNMRWPHAVAIATQGQLVVNNVKNQ 111
Query: 167 RVQIF-DVNGRVFQSDGTFVGKF 188
V IF + V Q G+F
Sbjct: 112 TVSIFHNSCCEVLQQQTILSGEF 134
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 30/49 (61%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
+FG GS GQ +P GV V D+G I V D N RIQ+FT G F+R F
Sbjct: 304 TFGEGGSGTGQFWYPVGVTVSDEGEIFVADRENQRIQVFTLQGAFVRQF 352
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + F+ G +GS G P GI +I+VAD N RV++ F +
Sbjct: 28 YKEDGEFLFRFGGKGSGDGQLNHPHGICTDRAGNIIVADWGNMRVEM-FDKTGKFLKHIV 86
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
WP +A+ +VV + N V +F +
Sbjct: 87 KNMRWPHAVAIATQGQLVVNNVKNQTVSIFHN 118
>gi|390334568|ref|XP_003723958.1| PREDICTED: tripartite motif-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 398
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 137/301 (45%), Gaps = 45/301 (14%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-----------CFPHFDLKTNC 92
+ G +GS+ G P GIA+ + +R+QV FP K
Sbjct: 115 EFGVKGSQDGQLYKPLGIAISAETGEFFVTDCKNRIQVFDNDGVFVRKFTFPQLAKKFTP 174
Query: 93 VFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
L T + ++ ++V+D SN +V V G + +FG GN+ G P +A
Sbjct: 175 THLTMT--KRLSSDGKECLLVSDVSNKQVLVCSLGGEILMRFG--GNELGM---PGGVA- 226
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE-----------HP 201
I D + H V ++ R + G V FG + + +++ P
Sbjct: 227 ------ITKDGSLHVVDMYARVVRTYNRSGQEVRSFGGLSSSQKKIDPNTEADECVFRSP 280
Query: 202 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISV 261
+IAV+ + ++VSDS +H + IFD +G F S G GQL+ P G+A+D+ G I V
Sbjct: 281 THIAVTRADILLVSDSQSHLIYIFDSDGGYRNKFNSIGKHGGQLQCPSGIAIDNSGNILV 340
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL---EGVAVMSNGNILVCDRENHRIQV 318
D+ N +Q+F G+F D F GL +G+A++++ ++ V D +NH +++
Sbjct: 341 ADTSVNSVQLFDYRGRFRNRV------DDSFDGLRNPQGMAIVNDEHVAVVDTDNHAVKL 394
Query: 319 F 319
F
Sbjct: 395 F 395
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 31/207 (14%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKF 188
+ +FG G++ GQL P IA+S T V+D N R+Q+FD +DG FV KF
Sbjct: 112 LIREFGVKGSQDGQLYKPLGIAISAETGEFFVTDCKN-RIQVFD-------NDGVFVRKF 163
Query: 189 GSMGNKAGQLEHPHYIAVSNTNR-----VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
+ A + H + ++VSD +N +V + + G ++ FG G+E G
Sbjct: 164 -TFPQLAKKFTPTHLTMTKRLSSDGKECLLVSDVSNKQVLVCSLGGEILMRFG--GNELG 220
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE-----------F 292
P GVA+ G + V D ++ + GQ +R+FG S + F
Sbjct: 221 ---MPGGVAITKDGSLHVVDMYARVVRTYNRSGQEVRSFGGLSSSQKKIDPNTEADECVF 277
Query: 293 KGLEGVAVMSNGNILVCDRENHRIQVF 319
+ +AV +LV D ++H I +F
Sbjct: 278 RSPTHIAVTRADILLVSDSQSHLIYIF 304
>gi|260785774|ref|XP_002587935.1| hypothetical protein BRAFLDRAFT_87323 [Branchiostoma floridae]
gi|229273090|gb|EEN43946.1| hypothetical protein BRAFLDRAFT_87323 [Branchiostoma floridae]
Length = 766
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 134/284 (47%), Gaps = 33/284 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCVFLAFTW 99
G G++PG F PRG+ V P N I VAD +N RVQV HF
Sbjct: 503 GGNGTQPGKFLDPRGVVVSPSNEIFVADYNNRRVQVHSTEGVYLRHFQTVVPGTGDKDME 562
Query: 100 PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 155
P + + + ++ V ++++H VQ + +DGT + F ++ + IAV T
Sbjct: 563 PHDVCMDGNGTLWVVGRGETTDHVVQ-YSTDGTAMAGF-----DLKKIGYSRGIAVDMRT 616
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
N ++VSD + V VF+ DG+ V ++ G++ I V ++VS
Sbjct: 617 NHILVSDPDQGAVH-------VFRPDGSLVR---TVRYPRGEMADLRCITVDGEGNILVS 666
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D ++ V + D +G+ + FG S +GQL P G+ D G+I V D GN R+QIFT
Sbjct: 667 DWKSNSVYVNDKSGKFLFQFGGWESGKGQLSGPHGICTDSSGHILVADYGNQRVQIFTRH 726
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F+R F+ E +AV G ++V +H + VF
Sbjct: 727 GEFVRTVRTG------FRP-ECLAVGPEGQLVVTSWNSHTVTVF 763
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 56/232 (24%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG---RVFQS---------- 180
FG G + G+ P + VS +N + V+D NN RVQ+ G R FQ+
Sbjct: 502 FGGNGTQPGKFLDPRGVVVSPSNEIFVADYNNRRVQVHSTEGVYLRHFQTVVPGTGDKDM 561
Query: 181 ---------DGTF-----------VGKFGSMGNKAG-----QLEHPHYIAVS-NTNRVIV 214
+GT V ++ + G ++ + IAV TN ++V
Sbjct: 562 EPHDVCMDGNGTLWVVGRGETTDHVVQYSTDGTAMAGFDLKKIGYSRGIAVDMRTNHILV 621
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRG-------VAVDDQGYISVGDSGNN 267
SD + V +F +G ++ + +++PRG + VD +G I V D +N
Sbjct: 622 SDPDQGAVHVFRPDGSLVRT----------VRYPRGEMADLRCITVDGEGNILVSDWKSN 671
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ + G+FL FG W SG G+ G G+ S+G+ILV D N R+Q+F
Sbjct: 672 SVYVNDKSGKFLFQFGGWESGKGQLSGPHGICTDSSGHILVADYGNQRVQIF 723
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
D+ VIT FG G++ G+ PRGV V I V D N R+Q+ + +G +LR F
Sbjct: 494 DLKQGVIT-FGGNGTQPGKFLDPRGVVVSPSNEIFVADYNNRRVQVHSTEGVYLRHFQTV 552
Query: 286 GSGDGEFKGLEGVAVMSNGN 305
G G+ K +E V +GN
Sbjct: 553 VPGTGD-KDMEPHDVCMDGN 571
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRG 102
F+ G S G + P GI I+VAD N RVQ+ H + V F P
Sbjct: 684 FQFGGWESGKGQLSGPHGICTDSSGHILVADYGNQRVQIFTRHGEF-VRTVRTGFR-PEC 741
Query: 103 IAVGPDNSIVVADSSNHRVQVF 124
+AVGP+ +VV ++H V VF
Sbjct: 742 LAVGPEGQLVVTSWNSHTVTVF 763
>gi|260825383|ref|XP_002607646.1| hypothetical protein BRAFLDRAFT_84665 [Branchiostoma floridae]
gi|229292994|gb|EEN63656.1| hypothetical protein BRAFLDRAFT_84665 [Branchiostoma floridae]
Length = 636
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 101/219 (46%), Gaps = 42/219 (19%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS-MGNKAGQLEHPHYIAVSNT 155
F G+AV DN + +AD N R+QVF DG ++ KF + + K G+ PH +AV
Sbjct: 371 FKCSSGVAVSLDNEVYIADCENFRIQVFTMDGVYLKKFATILPRKTGKKLRPHDVAVDRN 430
Query: 156 NRVIVSDSNNHRVQ------------------------------IFDVNG-----RVFQS 180
+ + V S +H VQ + + +G R+F
Sbjct: 431 DNLWVV-SKDHIVQYSREGKGLAQIDLPYVDNTRGITVATEQVIVTECDGQNGCLRLFNR 489
Query: 181 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGS 240
DG+ V + S P + V ++V+D+ NH V + D +G FGSEGS
Sbjct: 490 DGSEVNIYCS-----PLFGFPQCVTVDGEGNILVTDNRNHCVHVLDRDGNFKFKFGSEGS 544
Query: 241 EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
E QLK+PRG+ VD G I V DSGN +++F +FL
Sbjct: 545 GESQLKYPRGICVDGMGNIIVADSGNGCVKMFDSQRRFL 583
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 29/178 (16%)
Query: 101 RGIAVGPDNSIVV-ADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
RGI V + IV D N +++F DG+ V + S P + V ++
Sbjct: 463 RGITVATEQVIVTECDGQNGCLRLFNRDGSEVNIYCS-----PLFGFPQCVTVDGEGNIL 517
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ NH V + D DG F KFGS G+ QL++P I V +IV+DS N
Sbjct: 518 VTDNRNHCVHVLD-------RDGNFKFKFGSEGSGESQLKYPRGICVDGMGNIIVADSGN 570
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQL--------------KFPRGVAVDDQGYISVGD 263
V++FD R + SE E QL K+P GVAV G + V +
Sbjct: 571 GCVKMFDSQRRFLCHIASE--RELQLAPNDDNDNNTATGTKWPYGVAVSPGGDVVVTE 626
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGC-WGSGDGEF 292
FG GS G+ K GVAV + + D N RIQ+FT DG +L+ F G+
Sbjct: 360 KFGEWGSHRGEFKCSSGVAVSLDNEVYIADCENFRIQVFTMDGVYLKKFATILPRKTGKK 419
Query: 293 KGLEGVAVMSNGNILVCDRENHRIQ 317
VAV N N+ V + +H +Q
Sbjct: 420 LRPHDVAVDRNDNLWVVSK-DHIVQ 443
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 24/38 (63%)
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG WGS GEFK GVAV + + + D EN RIQVF
Sbjct: 361 FGEWGSHRGEFKCSSGVAVSLDNEVYIADCENFRIQVF 398
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 19/93 (20%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSN--------HRVQVCF--------- 83
+FK GS GS +PRGI V +I+VADS N R +C
Sbjct: 535 FKFKFGSEGSGESQLKYPRGICVDGMGNIIVADSGNGCVKMFDSQRRFLCHIASERELQL 594
Query: 84 -PHFDLKTNCVFLAFTWPRGIAVGPDNSIVVAD 115
P+ D N WP G+AV P +VV +
Sbjct: 595 APNDDNDNN-TATGTKWPYGVAVSPGGDVVVTE 626
>gi|410452441|ref|ZP_11306430.1| NHL repeat containing protein [Bacillus bataviensis LMG 21833]
gi|409934486|gb|EKN71371.1| NHL repeat containing protein [Bacillus bataviensis LMG 21833]
Length = 321
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 17/213 (7%)
Query: 111 IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
I V D+ N++VQVF G V KFG G++ GQ + P+ I + V+D +
Sbjct: 74 IYVTDTKNNQVQVFNQAGNNVLKFGKAGSEKGQFQFPYGITGDKDENIYVAD-------L 126
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
++ N +F S G F+ F + ++ P + + + ++ V+D +++ +F++ G+
Sbjct: 127 YNANISIFNSKGEFIKYFP---DPEKAIKAPGGMRIYD-EKLYVTDIKENKLFVFNLAGK 182
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+ G G +EG+ P VAVD I V DSGNNR+Q+F +G+F++ GS DG
Sbjct: 183 KLMEIGGPGQDEGRFIAPNAVAVDKDKQIYVTDSGNNRVQVFDKEGKFIKVIN--GSKDG 240
Query: 291 E----FKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ F GVA+ S G + V +H I +
Sbjct: 241 KGNSIFVNPRGVAIDSKGTVYVVSNLSHNIYAY 273
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 112/237 (47%), Gaps = 18/237 (7%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------A 96
K G GSE G F +P GI D +I VAD N + + F+ K + A
Sbjct: 95 LKFGKAGSEKGQFQFPYGITGDKDENIYVADLYNANISI----FNSKGEFIKYFPDPEKA 150
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
P G+ + D + V D +++ VF G + + G G G+ P+ +AV
Sbjct: 151 IKAPGGMRI-YDEKLYVTDIKENKLFVFNLAGKKLMEIGGPGQDEGRFIAPNAVAVDKDK 209
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQS-DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
++ V+DS N+RVQ+FD G+ + +G+ GK S+ +P +A+ + V V
Sbjct: 210 QIYVTDSGNNRVQVFDKEGKFIKVINGSKDGKGNSI------FVNPRGVAIDSKGTVYVV 263
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+ +H + +D G G G++ GQL P G+ +DD+ I V D+ N RI +F
Sbjct: 264 SNLSHNIYAYDKEGNEARVLGGMGTDNGQLYLPNGLFIDDRDAIYVTDTINQRISVF 320
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 239 GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGV 298
GS E L P V+ + +I V D+ NN++Q+F G + FG GS G+F+ G+
Sbjct: 55 GSFESPLNKPMDVSKIGE-FIYVTDTKNNQVQVFNQAGNNVLKFGKAGSEKGQFQFPYGI 113
Query: 299 AVMSNGNILVCDRENHRIQVF 319
+ NI V D N I +F
Sbjct: 114 TGDKDENIYVADLYNANISIF 134
>gi|260782160|ref|XP_002586159.1| hypothetical protein BRAFLDRAFT_255103 [Branchiostoma floridae]
gi|229271252|gb|EEN42170.1| hypothetical protein BRAFLDRAFT_255103 [Branchiostoma floridae]
Length = 269
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 124/268 (46%), Gaps = 57/268 (21%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G+AV + I VADS N R+QVF GTFV +F ++ + +++ PH +A+
Sbjct: 11 FIDPVGVAVSDEGEIFVADSLNQRIQVFTLQGTFVRQFPTVVSGEEKMK-PHGVAMDGEG 69
Query: 157 RVIV---SDSNNHRVQIFDVNGRV------------------------------------ 177
+ V + S N VQ ++ GRV
Sbjct: 70 NLWVVGETYSANFAVQ-YNSQGRVLRKFDLQMTWWLRGVAVDTRRNHILITQTTGDIGNR 128
Query: 178 ------FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
F+ DGT V ++G + G +++P YI + +IVSD + V +++ +G+
Sbjct: 129 QGEVLVFRPDGTLVR---TVGQQQG-MKYPQYITMDGEGNIIVSDWDKSCVYVYNEDGQF 184
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ F EGS EGQL PRG+ D G I V D GNNR+++F G+FL+ +
Sbjct: 185 LFLFEGEGSGEGQLDNPRGICTDKAGNIIVADYGNNRVEMFDKTGKFLKHITT------D 238
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
K VA+ G ++V D E + + +F
Sbjct: 239 MKQPWAVAMAPQGQLVVTDVEKNTVSIF 266
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 57/234 (24%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G+ +G+ P +AVS+ + V+DS N R+Q+F + GTFV +F ++ +
Sbjct: 1 FGGEGSGSGKFIDPVGVAVSDEGEIFVADSLNQRIQVFTLQ-------GTFVRQFPTVVS 53
Query: 194 KAGQLEHPHYIAVSNTNRVIV---SDSNNHRVQIFDVNGRVITSF--------------- 235
+++ PH +A+ + V + S N VQ ++ GRV+ F
Sbjct: 54 GEEKMK-PHGVAMDGEGNLWVVGETYSANFAVQ-YNSQGRVLRKFDLQMTWWLRGVAVDT 111
Query: 236 -----------GSEGSEEGQ-------------------LKFPRGVAVDDQGYISVGDSG 265
G G+ +G+ +K+P+ + +D +G I V D
Sbjct: 112 RRNHILITQTTGDIGNRQGEVLVFRPDGTLVRTVGQQQGMKYPQYITMDGEGNIIVSDWD 171
Query: 266 NNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ + ++ DGQFL F GSG+G+ G+ GNI+V D N+R+++F
Sbjct: 172 KSCVYVYNEDGQFLFLFEGEGSGEGQLDNPRGICTDKAGNIIVADYGNNRVEMF 225
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F GS G PRGI +I+VAD N+RV++ F +
Sbjct: 178 YNEDGQFLFLFEGEGSGEGQLDNPRGICTDKAGNIIVADYGNNRVEM-FDKTGKFLKHIT 236
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
P +A+ P +VV D + V +F +
Sbjct: 237 TDMKQPWAVAMAPQGQLVVTDVEKNTVSIFHT 268
>gi|290975887|ref|XP_002670673.1| predicted protein [Naegleria gruberi]
gi|284084234|gb|EFC37929.1| predicted protein [Naegleria gruberi]
Length = 1074
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 121/246 (49%), Gaps = 30/246 (12%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT--------NCVFLAFTWPRGIAV 105
CF +P G++ + + + DS N R++ + T + ++ + A+
Sbjct: 744 CFNYPSGVSSNSNGDVFIIDSFNSRIR-KLSSGKISTVAGGLGDGSSAVNSYLNSQSFAI 802
Query: 106 GPDN-SIVVADSSNHRVQVFQSDGTF-------VGKFGSMGNKA--GQLEHPHYIAVSNT 155
+ I +ADS+NHR++ ++G V F G A L +P Y+AV++
Sbjct: 803 SSKSGEIFIADSNNHRIRKIATNGDISTVAGSGVAGFSGDGGLATSATLNNPSYVAVNSN 862
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAG--QLEHPHYIAVSNTNRVI 213
+++SD+NNHR++ +NG + G + GN A QL +P + VS+T +
Sbjct: 863 GELLISDTNNHRIRKVSLNGIITTIAGNGTAGYNGEGNNASLYQLNYPSGLVVSSTGDLF 922
Query: 214 VSDSNNHRVQIFDVNGRVITSFGS-------EGS--EEGQLKFPRGVAVDDQGYISVGDS 264
++DS NHR++ +VNG + TS G+ +GS QL FP G+AV G + + D
Sbjct: 923 IADSYNHRIRKLNVNGTISTSAGNGIAGLSGDGSLPTSAQLNFPTGLAVSSVGELYISDD 982
Query: 265 GNNRIQ 270
NNRI+
Sbjct: 983 SNNRIR 988
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 137/301 (45%), Gaps = 39/301 (12%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT---------NCVFLA-----FTWP 100
+P I++G I ++D N RV+ + + T N LA F +P
Sbjct: 689 LNFPFSISIGNSGEIYISDQYNQRVRKVAANGYISTIAGSGAIGFNGDGLAATSTCFNYP 748
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSD--GTFVGKFGSMGNKAGQLEHPHYIAVSN-TNR 157
G++ + + + DS N R++ S T G G + + A+S+ +
Sbjct: 749 SGVSSNSNGDVFIIDSFNSRIRKLSSGKISTVAGGLGDGSSAVNSYLNSQSFAISSKSGE 808
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA--GQLEHPHYIAVSNTNRVIVS 215
+ ++DSNNHR++ NG + G+ V F G A L +P Y+AV++ +++S
Sbjct: 809 IFIADSNNHRIRKIATNGDISTVAGSGVAGFSGDGGLATSATLNNPSYVAVNSNGELLIS 868
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSE----EG------QLKFPRGVAVDDQGYISVGDSG 265
D+NNHR++ +NG +IT+ G+ EG QL +P G+ V G + + DS
Sbjct: 869 DTNNHRIRKVSLNG-IITTIAGNGTAGYNGEGNNASLYQLNYPSGLVVSSTGDLFIADSY 927
Query: 266 NNRIQIFTPDGQFLRAFG---CWGSGDGEFKGLE------GVAVMSNGNILVCDRENHRI 316
N+RI+ +G + G SGDG G+AV S G + + D N+RI
Sbjct: 928 NHRIRKLNVNGTISTSAGNGIAGLSGDGSLPTSAQLNFPTGLAVSSVGELYISDDSNNRI 987
Query: 317 Q 317
+
Sbjct: 988 R 988
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 131/306 (42%), Gaps = 49/306 (16%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC--------------VFLAFTWPRGI 103
P+G+ V I +DS NHR++ + T + +P GI
Sbjct: 518 PKGVVVSSSGEIYFSDSENHRIRKISTGGIISTVAGSGESGFSGDGGLAISAKIHYPNGI 577
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDG--TFVGKFGSMGNKA-----------GQLEHPHYI 150
A+ + ++ D+ N+R++ + G + + G++ KA QL P +
Sbjct: 578 AMNSNGELIFTDTRNNRIRKVSTSGYISTIAGNGTVAYKATFSGDNGLAINAQLFVPFAV 637
Query: 151 AVSNTNR-VIVSDSNNHRV-QIFDVNGRVFQSDGT----FVGKFGSMGNKAGQLEHPHYI 204
AV+ TN + ++DS NHR+ ++ +G + GT F G G N +L P I
Sbjct: 638 AVNLTNNDIYIADSGNHRIRKVSSSSGIITTVAGTGTSGFSGDNGLATNA--KLNFPFSI 695
Query: 205 AVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSE---------GSEEGQLKFPRGVAVDD 255
++ N+ + +SD N RV+ NG + T GS + +P GV+ +
Sbjct: 696 SIGNSGEIYISDQYNQRVRKVAANGYISTIAGSGAIGFNGDGLAATSTCFNYPSGVSSNS 755
Query: 256 QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG---EFKGLEGVAVMS-NGNILVCDR 311
G + + DS N+RI+ + G+ G G G + + A+ S +G I + D
Sbjct: 756 NGDVFIIDSFNSRIRKLS-SGKISTVAGGLGDGSSAVNSYLNSQSFAISSKSGEIFIADS 814
Query: 312 ENHRIQ 317
NHRI+
Sbjct: 815 NNHRIR 820
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 131/298 (43%), Gaps = 42/298 (14%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV-FLAFTWPRGIAVGPDNSIV 112
F P G + N+++ D N +V+ DL TN + L+ P G AV N+ V
Sbjct: 368 SFVSPNGNPIIYGNNLLFTD--NGKVR----RVDLSTNVISTLSSVTPLGSAVSYYNNEV 421
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSMGNKAG-------QLEHPHYIAVSNTNRVIVSDSNN 165
+ +S T V G++G +G +L +P+ I +S+ SDS+N
Sbjct: 422 YVMYLGSYLSKIKSSLTAVAGTGAIGADSGDGLAITERLHNPNSIFISSNGDSYFSDSSN 481
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKA--GQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
H+++ NG + GT + G+ A +L +P + VS++ + SDS NHR++
Sbjct: 482 HKIRKLS-NGYITTIAGTGTSGYSGDGSSATSAKLNNPKGVVVSSSGEIYFSDSENHRIR 540
Query: 224 IFDVNGRVITSFGSEGSE---------EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
G + T GS S ++ +P G+A++ G + D+ NNRI+ +
Sbjct: 541 KISTGGIISTVAGSGESGFSGDGGLAISAKIHYPNGIAMNSNGELIFTDTRNNRIRKVST 600
Query: 275 DGQFLRAFGCWGS--GDGEFKGLEGVAV-------------MSNGNILVCDRENHRIQ 317
G ++ G+ F G G+A+ ++N +I + D NHRI+
Sbjct: 601 SG-YISTIAGNGTVAYKATFSGDNGLAINAQLFVPFAVAVNLTNNDIYIADSGNHRIR 657
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 124/308 (40%), Gaps = 93/308 (30%)
Query: 99 WPRGIAVGPDNSIVVADSSNHRV-QVFQSD-GTFVG----KFGSMGNKAGQLE--HPHYI 150
+P GIA+G ++ I++AD+ N R+ +V SD TF G F G A Q E P+ +
Sbjct: 39 YPYGIALGLNSEILIADTFNQRIRKVSSSDVSTFAGVGTSSFSGDGALATQSEINFPYGV 98
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA----GQLEHPHYIA- 205
V++ ++D++NH ++ NG++ GT +G G+ L P+ +A
Sbjct: 99 IVNSLGETFIADTSNHVIRKVSTNGKISTIAGT-ASSYGYSGDGGLATNALLNSPYGLAL 157
Query: 206 ---------VSNTNRVI------------------------------------------- 213
V +N VI
Sbjct: 158 NSSSGEVIIVDTSNNVIRKVSSIGNITTIAGTGAAGYSGDNGQATNAKFNAPRAAFYSNG 217
Query: 214 ---VSDSNNHRVQIFDVNGRVITSFGSEG---------SEEGQLKFPRGVAVDDQGYISV 261
V+DS NHR++ +G V T G+ ++ QL +P G++V+ G I +
Sbjct: 218 ELFVADSRNHRIRKISNSGIVTTVAGTGTAGFNGDSILAKNAQLNYPSGISVNSNGEIFI 277
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWG---SGDGEFKGL---------EGVAVMSNGNILVC 309
DS NNRI+ +G + G SGDG GL G+ V S G I +
Sbjct: 278 SDSVNNRIRKILTNGTIITIAGTGTVGLSGDG---GLAVNAQLWLPSGIVVNSVGEIFIS 334
Query: 310 DRENHRIQ 317
D NHRI+
Sbjct: 335 DSYNHRIR 342
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 135/338 (39%), Gaps = 77/338 (22%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL----KTNCVFL---------AFTW-P 100
+P GI+V + I ++DS N+R++ + + T V L A W P
Sbjct: 261 LNYPSGISVNSNGEIFISDSVNNRIRKILTNGTIITIAGTGTVGLSGDGGLAVNAQLWLP 320
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDG---TFVG--KFGSMGNKAGQLEHPHYIAVSNT 155
GI V I ++DS NHR++ + G TF G FG + P+ +
Sbjct: 321 SGIVVNSVGEIFISDSYNHRIRKISASGVISTFAGTSSFGEDVQASKSFVSPNGNPIIYG 380
Query: 156 NRVIVSDSNNHRVQIFDVNGRV--------------------------------FQSDGT 183
N ++ +D N +V+ D++ V +S T
Sbjct: 381 NNLLFTD--NGKVRRVDLSTNVISTLSSVTPLGSAVSYYNNEVYVMYLGSYLSKIKSSLT 438
Query: 184 FVGKFGSMGNKAG-------QLEHPHYIAVSNTNRVIVSDSNNHRVQ------IFDVNGR 230
V G++G +G +L +P+ I +S+ SDS+NH+++ I + G
Sbjct: 439 AVAGTGAIGADSGDGLAITERLHNPNSIFISSNGDSYFSDSSNHKIRKLSNGYITTIAGT 498
Query: 231 VITSFGSEGSEEGQLKF--PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
+ + +GS K P+GV V G I DS N+RI+ + G G SG
Sbjct: 499 GTSGYSGDGSSATSAKLNNPKGVVVSSSGEIYFSDSENHRIRKISTGGIISTVAGSGESG 558
Query: 289 DGEFKGLE---------GVAVMSNGNILVCDRENHRIQ 317
GL G+A+ SNG ++ D N+RI+
Sbjct: 559 FSGDGGLAISAKIHYPNGIAMNSNGELIFTDTRNNRIR 596
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 41/258 (15%)
Query: 57 WPRGIAVGPDNSIVVADSSNHRVQVCFPHFD------------------LKTNCVFLAFT 98
+P G+ V +AD+SNH ++ + L TN +
Sbjct: 94 FPYGVIVNSLGETFIADTSNHVIRKVSTNGKISTIAGTASSYGYSGDGGLATNAL---LN 150
Query: 99 WPRGIAVGPDN-SIVVADSSNHRVQVFQSDG--TFVGKFGSMGNKA--GQLEHPHY---- 149
P G+A+ + +++ D+SN+ ++ S G T + G+ G GQ + +
Sbjct: 151 SPYGLALNSSSGEVIIVDTSNNVIRKVSSIGNITTIAGTGAAGYSGDNGQATNAKFNAPR 210
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVS 207
A + + V+DS NHR++ +G V GT F S+ K QL +P I+V+
Sbjct: 211 AAFYSNGELFVADSRNHRIRKISNSGIVTTVAGTGTAGFNGDSILAKNAQLNYPSGISVN 270
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGS-------EG--SEEGQLKFPRGVAVDDQGY 258
+ + +SDS N+R++ NG +IT G+ +G + QL P G+ V+ G
Sbjct: 271 SNGEIFISDSVNNRIRKILTNGTIITIAGTGTVGLSGDGGLAVNAQLWLPSGIVVNSVGE 330
Query: 259 ISVGDSGNNRIQIFTPDG 276
I + DS N+RI+ + G
Sbjct: 331 IFISDSYNHRIRKISASG 348
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 38/203 (18%)
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSD-GTFVG----KFGSMGNKAGQL 198
L +P+ IA+ + ++++D+ N R++ +V SD TF G F G A Q
Sbjct: 37 LRYPYGIALGLNSEILIADTFNQRIR------KVSSSDVSTFAGVGTSSFSGDGALATQS 90
Query: 199 E--HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT------SFGSEG----SEEGQLK 246
E P+ + V++ ++D++NH ++ NG++ T S+G G + L
Sbjct: 91 EINFPYGVIVNSLGETFIADTSNHVIRKVSTNGKISTIAGTASSYGYSGDGGLATNALLN 150
Query: 247 FPRGVAVD-DQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG-------- 297
P G+A++ G + + D+ NN I+ + G G+G + G G
Sbjct: 151 SPYGLALNSSSGEVIIVDTSNNVIRKVSSIGNITT---IAGTGAAGYSGDNGQATNAKFN 207
Query: 298 ---VAVMSNGNILVCDRENHRIQ 317
A SNG + V D NHRI+
Sbjct: 208 APRAAFYSNGELFVADSRNHRIR 230
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 134/341 (39%), Gaps = 84/341 (24%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC----------VFLA----FTWP 100
F PR A + + VADS NHR++ + T LA +P
Sbjct: 206 FNAPRA-AFYSNGELFVADSRNHRIRKISNSGIVTTVAGTGTAGFNGDSILAKNAQLNYP 264
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFV-----GKFGSMGNKA----GQLEHPHYIA 151
GI+V + I ++DS N+R++ ++GT + G G G+ QL P I
Sbjct: 265 SGISVNSNGEIFISDSVNNRIRKILTNGTIITIAGTGTVGLSGDGGLAVNAQLWLPSGIV 324
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V++ + +SDS NHR++ +G + GT FG + P+ + N
Sbjct: 325 VNSVGEIFISDSYNHRIRKISASGVISTFAGT--SSFGEDVQASKSFVSPNGNPIIYGNN 382
Query: 212 VIVSDSNNHRVQIFDVNGRVITSF------------------------------------ 235
++ +D N +V+ D++ VI++
Sbjct: 383 LLFTD--NGKVRRVDLSTNVISTLSSVTPLGSAVSYYNNEVYVMYLGSYLSKIKSSLTAV 440
Query: 236 ---GSEGSEEG-------QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF--LRAFG 283
G+ G++ G +L P + + G DS N++I+ + +G + G
Sbjct: 441 AGTGAIGADSGDGLAITERLHNPNSIFISSNGDSYFSDSSNHKIRKLS-NGYITTIAGTG 499
Query: 284 CWG-SGDG------EFKGLEGVAVMSNGNILVCDRENHRIQ 317
G SGDG + +GV V S+G I D ENHRI+
Sbjct: 500 TSGYSGDGSSATSAKLNNPKGVVVSSSGEIYFSDSENHRIR 540
>gi|260782498|ref|XP_002586323.1| hypothetical protein BRAFLDRAFT_108978 [Branchiostoma floridae]
gi|229271426|gb|EEN42334.1| hypothetical protein BRAFLDRAFT_108978 [Branchiostoma floridae]
Length = 619
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 136/304 (44%), Gaps = 46/304 (15%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH----FDLKTNCVFLA---FT 98
G++GS+ G PRGIAV + I VAD N R+QV H + ++ FL+
Sbjct: 329 GTQGSKKGEHNNPRGIAVSEEGEIFVADQKNQRIQVITIHQDDRYSVRQFPTFLSDEQKM 388
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY---IAVS-N 154
P IA+ + + V +N Q D K G + QLE + IAV
Sbjct: 389 APHDIAMDSEEKLWVVGDTNSADFAVQYD-----KQGIWVLRKIQLEDTKWTRGIAVDPR 443
Query: 155 TNRVIVS----DSNNHRVQIFDVNGRVFQSDGTFVGKFGSM---------------GNKA 195
N ++++ D +N ++ VF DG V G+ G+
Sbjct: 444 KNHILITQTTGDGDNKHGEVL-----VFTPDGVKVRTVGAAHDHGKWKKIRQLVGPGDVQ 498
Query: 196 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD 255
L+ P YIAV ++VSD+ NH + +++ G+ + SFG E S EGQL+ P+G+ +D
Sbjct: 499 QGLKFPQYIAVDRKGNILVSDNENHCIYMYNKYGKFLFSFGGEESGEGQLEDPKGICIDK 558
Query: 256 QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHR 315
G I V D + ++F G FLR + VAV G+++V D NH+
Sbjct: 559 SGNIIVADKEKGQSELFDNKGNFLRHIKVADEVP------QAVAVTKQGHLVVTDCVNHK 612
Query: 316 IQVF 319
+ +F
Sbjct: 613 VVMF 616
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 35/211 (16%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG+ G+K G+ +P IAVS + V+D N R+Q+ ++ Q D V +F + +
Sbjct: 328 FGTQGSKKGEHNNPRGIAVSEEGEIFVADQKNQRIQVITIH----QDDRYSVRQFPTFLS 383
Query: 194 KAGQLEHPHYIAVSNTNRV-IVSDSNNHRVQI-FDVNG-RVITSFGSEGSEEGQLKFPRG 250
++ PH IA+ + ++ +V D+N+ + +D G V+ E + K+ RG
Sbjct: 384 DEQKMA-PHDIAMDSEEKLWVVGDTNSADFAVQYDKQGIWVLRKIQLEDT-----KWTRG 437
Query: 251 VAVDD-QGYISV------GDSGNNRIQIFTPDGQFLRAFGC------W-------GSGDG 290
+AVD + +I + GD+ + + +FTPDG +R G W G GD
Sbjct: 438 IAVDPRKNHILITQTTGDGDNKHGEVLVFTPDGVKVRTVGAAHDHGKWKKIRQLVGPGDV 497
Query: 291 E--FKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ K + +AV GNILV D ENH I ++
Sbjct: 498 QQGLKFPQYIAVDRKGNILVSDNENHCIYMY 528
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
SFG++GS++G+ PRG+AV ++G I V D N RIQ+ T
Sbjct: 327 SFGTQGSKKGEHNNPRGIAVSEEGEIFVADQKNQRIQVIT 366
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
Q +FG GS GE G+AV G I V D++N RIQV
Sbjct: 323 QSTESFGTQGSKKGEHNNPRGIAVSEEGEIFVADQKNQRIQVI 365
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC---VFLAFTW 99
F G S G P+GI + +I+VAD + ++ FD K N + +A
Sbjct: 536 FSFGGEESGEGQLEDPKGICIDKSGNIIVADKEKGQSEL----FDNKGNFLRHIKVADEV 591
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVF 124
P+ +AV +VV D NH+V +F
Sbjct: 592 PQAVAVTKQGHLVVTDCVNHKVVMF 616
>gi|260823290|ref|XP_002604116.1| hypothetical protein BRAFLDRAFT_71596 [Branchiostoma floridae]
gi|229289441|gb|EEN60127.1| hypothetical protein BRAFLDRAFT_71596 [Branchiostoma floridae]
Length = 819
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 145/323 (44%), Gaps = 45/323 (13%)
Query: 21 VSGIGQVGTTPRSQYLQKRRL-QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRV 79
SG G G T Q+R+ + G RG G F P G+ V + I V+D N R+
Sbjct: 515 ASGNGAAGGTGHHHGNQRRQPHKVTFGERGMGTGQFDNPHGVTVSDEGEIFVSDCRNQRI 574
Query: 80 QVCFPHFDLKTNCVFLAFT--------WPRGIAV-GPDNSIVVADSSNHRVQVFQSDGTF 130
QV F L+ V T P+G+A+ G N VV+D +
Sbjct: 575 QV----FTLQGTFVRQFPTVVSGDQKMQPQGVAMDGEGNLWVVSDLAP------------ 618
Query: 131 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR---------VFQSD 181
F NK G++ + + +R + D+ + + I G V++ D
Sbjct: 619 -SHFAVQYNKQGRVLRKFDLQQTGRHRRVAVDTRRNHILITQTTGDWPNLQGEVLVYRPD 677
Query: 182 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSE 241
V ++G + G ++ P +I V+ ++VSDS NH V +++V+G+ + FG EGS
Sbjct: 678 RALVR---TVGQQQG-IKCPQFITVNGEGNILVSDSENHCVYVYNVDGQFLFQFGGEGSG 733
Query: 242 EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE----- 296
EGQLKFP G+ D G I V D GN+ +++F G+FL+ + +
Sbjct: 734 EGQLKFPHGICTDRAGNIIVADWGNSSVEMFDKTGKFLKTRTLLLKHISTYVNTDMSHPC 793
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
VA+ + G ++V D +++ +F
Sbjct: 794 AVAMATQGQLVVTDLVKNKVSIF 816
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 141/366 (38%), Gaps = 90/366 (24%)
Query: 33 SQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC 92
+Q Q +++ F G RGS G F P G+ V + I VAD N R+QV F L+
Sbjct: 363 NQTHQPQKVTF--GERGSGTGQFWDPVGVTVSDEGEIFVADRENQRIQV----FTLQGTF 416
Query: 93 VFLAFTWPRG-IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
V T G + PD+ V D + V ++ F F NK G++ +
Sbjct: 417 VRQFSTVVSGEKKIYPDD--VAMDGEGNLWVVGRT--RFAAYFAVQYNKLGEVLRKFALQ 472
Query: 152 VSNTNRVIVSDSNNHRV------------QIFDVNGRVFQSDGTFVG------------- 186
+ + + D+ + + ++ + + ++ + G
Sbjct: 473 KTGWYKGVAVDTRRNHILIATTKTKGQYSELHEALATIREAPASGNGAAGGTGHHHGNQR 532
Query: 187 ------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGS 240
FG G GQ ++PH + VS+ + VSD N R+Q+F + G + F + S
Sbjct: 533 RQPHKVTFGERGMGTGQFDNPHGVTVSDEGEIFVSDCRNQRIQVFTLQGTFVRQFPTVVS 592
Query: 241 EEGQLKFPRGVAVDDQGYI-SVGDSGNNRIQI-FTPDGQFLRAFGCWGSG---------- 288
+ +++ P+GVA+D +G + V D + + + G+ LR F +G
Sbjct: 593 GDQKMQ-PQGVAMDGEGNLWVVSDLAPSHFAVQYNKQGRVLRKFDLQQTGRHRRVAVDTR 651
Query: 289 ---------DGEFKGLEG--------------------------VAVMSNGNILVCDREN 313
G++ L+G + V GNILV D EN
Sbjct: 652 RNHILITQTTGDWPNLQGEVLVYRPDRALVRTVGQQQGIKCPQFITVNGEGNILVSDSEN 711
Query: 314 HRIQVF 319
H + V+
Sbjct: 712 HCVYVY 717
>gi|260793565|ref|XP_002591782.1| hypothetical protein BRAFLDRAFT_123529 [Branchiostoma floridae]
gi|229276992|gb|EEN47793.1| hypothetical protein BRAFLDRAFT_123529 [Branchiostoma floridae]
Length = 535
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 85/149 (57%), Gaps = 14/149 (9%)
Query: 128 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK 187
G V KFG G + GQ +HP +AVS+ +IV+D+ NHR+Q+FD S G F+
Sbjct: 371 GELVVKFGGWGPQQGQFKHPGGVAVSSAGHIIVADTGNHRIQVFD-------SRGVFLRA 423
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG G+ HPH +A++ +R++V+D N V++F + G++I G+ G LK
Sbjct: 424 FGFYGSADDAFSHPHDVAMTTDDRILVTDKGNKLVKLFTLEGKLIGKIGT-----GNLKE 478
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
P GVAV G ++V D+ + ++ FT G
Sbjct: 479 PTGVAVYKHGGVAVTDTRD--VKTFTRTG 505
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 182 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSE 241
G V KFG G + GQ +HP +AVS+ +IV+D+ NHR+Q+FD G + +FG GS
Sbjct: 371 GELVVKFGGWGPQQGQFKHPGGVAVSSAGHIIVADTGNHRIQVFDSRGVFLRAFGFYGSA 430
Query: 242 EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVM 301
+ P VA+ I V D GN +++FT +G+ + G G K GVAV
Sbjct: 431 DDAFSHPHDVAMTTDDRILVTDKGNKLVKLFTLEGKLIGKI-----GTGNLKEPTGVAVY 485
Query: 302 SNGNILVCD 310
+G + V D
Sbjct: 486 KHGGVAVTD 494
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G+AV I+VAD+ NHR+QVF S G F+ FG G+ HPH +A++ +
Sbjct: 387 FKHPGGVAVSSAGHIIVADTGNHRIQVFDSRGVFLRAFGFYGSADDAFSHPHDVAMTTDD 446
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
R++V+D N V++F + G++ +GK G+ G L+ P +AV V V+D
Sbjct: 447 RILVTDKGNKLVKLFTLEGKL-------IGKIGT-----GNLKEPTGVAVYKHGGVAVTD 494
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
+ + V+ F G + S + G + + DD+G S
Sbjct: 495 TRD--VKTFTRTG--VMSATCTSDDPG---YSHYLCTDDEGRCS 531
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 57/91 (62%)
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G ++ FG G ++GQ K P GVAV G+I V D+GN+RIQ+F G FLRAFG +GS
Sbjct: 371 GELVVKFGGWGPQQGQFKHPGGVAVSSAGHIIVADTGNHRIQVFDSRGVFLRAFGFYGSA 430
Query: 289 DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D F VA+ ++ ILV D+ N +++F
Sbjct: 431 DDAFSHPHDVAMTTDDRILVTDKGNKLVKLF 461
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 24/147 (16%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---- 95
L K G G + G F P G+AV I+VAD+ NHR+QV FD + VFL
Sbjct: 372 ELVVKFGGWGPQQGQFKHPGGVAVSSAGHIIVADTGNHRIQV----FDSRG--VFLRAFG 425
Query: 96 -------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
AF+ P +A+ D+ I+V D N V++F +G +GK G+ G L+ P
Sbjct: 426 FYGSADDAFSHPHDVAMTTDDRILVTDKGNKLVKLFTLEGKLIGKIGT-----GNLKEPT 480
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNG 175
+AV V V+D+ + V+ F G
Sbjct: 481 GVAVYKHGGVAVTDTRD--VKTFTRTG 505
>gi|260824637|ref|XP_002607274.1| hypothetical protein BRAFLDRAFT_88222 [Branchiostoma floridae]
gi|229292620|gb|EEN63284.1| hypothetical protein BRAFLDRAFT_88222 [Branchiostoma floridae]
Length = 559
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 23/278 (8%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIA 104
+G G G F +P +AV D IVVAD N R+Q K + + G
Sbjct: 300 VGQEGRGDGQFYYPTSVAVTTDGDIVVADHDNRRLQFLDKDGSFKKK---VELEFEPGCV 356
Query: 105 VGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 164
V N ++ H++ V G + + A + ++ IA + R+IV +
Sbjct: 357 VALTNGELLVTGDEHKIHVLDKQGR-ESRVIQVTGAAEKDKNTEDIAFDSLGRIIV--TI 413
Query: 165 NHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 224
++V + NG + KFG G +L ++ V+++N++IVSD NH ++I
Sbjct: 414 GYQVLVLSFNG-------DNILKFGDKGQGQQKLSFYLHVTVNSSNQIIVSDCGNHNLKI 466
Query: 225 FDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGC 284
FD GR + + GS GS GQL P V D + I V D N+R+ +F+ DG F+R
Sbjct: 467 FDPTGRHLFTCGSRGSGLGQLTCPYCVITDGEDNIIVADCSNHRVSVFSRDGTFIRHVLT 526
Query: 285 WGSGDGEFKGLE---GVAVMSNGNILVCDRENHRIQVF 319
GL G+ + +G+++V D NH I +F
Sbjct: 527 RKE-----HGLNYPFGLTLTHDGHLVVSD--NHSINIF 557
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 33/222 (14%)
Query: 129 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR------------ 176
T + G G GQ +P +AV+ ++V+D +N R+Q D +G
Sbjct: 295 TLLKTVGQEGRGDGQFYYPTSVAVTTDGDIVVADHDNRRLQFLDKDGSFKKKVELEFEPG 354
Query: 177 --VFQSDGTFV-----------------GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
V ++G + + + A + ++ IA + R+IV +
Sbjct: 355 CVVALTNGELLVTGDEHKIHVLDKQGRESRVIQVTGAAEKDKNTEDIAFDSLGRIIV--T 412
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
++V + NG I FG +G + +L F V V+ I V D GN+ ++IF P G+
Sbjct: 413 IGYQVLVLSFNGDNILKFGDKGQGQQKLSFYLHVTVNSSNQIIVSDCGNHNLKIFDPTGR 472
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L G GSG G+ V NI+V D NHR+ VF
Sbjct: 473 HLFTCGSRGSGLGQLTCPYCVITDGEDNIIVADCSNHRVSVF 514
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------ 96
K G +G ++ + V N I+V+D NH +++ FD +F
Sbjct: 428 LKFGDKGQGQQKLSFYLHVTVNSSNQIIVSDCGNHNLKI----FDPTGRHLFTCGSRGSG 483
Query: 97 ---FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
T P + +++I+VAD SNHRV VF DGTF+ + K L +P + ++
Sbjct: 484 LGQLTCPYCVITDGEDNIIVADCSNHRVSVFSRDGTFIRHV--LTRKEHGLNYPFGLTLT 541
Query: 154 NTNRVIVSDSNNHRVQIFDV 173
+ ++VSD NH + IF V
Sbjct: 542 HDGHLVVSD--NHSINIFKV 559
>gi|260815444|ref|XP_002602483.1| hypothetical protein BRAFLDRAFT_86868 [Branchiostoma floridae]
gi|229287793|gb|EEN58495.1| hypothetical protein BRAFLDRAFT_86868 [Branchiostoma floridae]
Length = 730
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 137/307 (44%), Gaps = 39/307 (12%)
Query: 25 GQVGTTPRSQYLQKRRLQ-FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF 83
G V +P +Q + IG GS G P +A+ D +I V + N RVQ+
Sbjct: 448 GSVAGSPFDIRMQSKDTPVLTIGREGSGEGELFNPTDVAMDMDGNIAVVEQGNSRVQI-- 505
Query: 84 PHFDLKTNCVFLAFT----WPRGIAVGPDNSIVVA------DSSNHRVQVFQSDGTFVGK 133
FD KT F +P I + + +V + N ++V+ +G
Sbjct: 506 --FDAKTGQSLRCFPVDGGYPLDIDIDSNGQFIVTFYNDHNTTGNQAIRVYSKEGKLTKT 563
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
K L P +AV R++V+D + Q DG+ + G
Sbjct: 564 L-----KPDCLRDPRGVAVLQDGRMVVADHTQKSCLLL-------QPDGSLIRDIGK--- 608
Query: 194 KAGQLEHPHYIAVSNTNRVI-VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
GQL++P +IAV ++ ++ V+D + H+V +FD+ G++ SFG +G +EG K P G+
Sbjct: 609 --GQLQNPWFIAVDESHGLLFVTDYSAHKVFVFDLEGKLKFSFGEQGQDEGASK-PTGIT 665
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRE 312
VD G I V + GN R+Q+F DG +LR G G+A+ + +I V
Sbjct: 666 VDPAGNIIVVNVGNGRLQVFGSDGAYLRTVATVRGGVP-----CGIALTPDSHIAVACHF 720
Query: 313 NHRIQVF 319
H ++++
Sbjct: 721 GHCVELY 727
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 114 ADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 173
+D + QV S+GT V +F +AG+++ H V + + SN + D
Sbjct: 332 SDLTARPSQVVFSEGTAVAEFRDDVARAGRVQVRHTGKVDASKCSVKGFSNFSLLSTIDE 391
Query: 174 NGR---VFQSDGTFVGKFGSMGNKAGQLEHPH--YIAVSNTNRVIVSDSNNHRVQI---- 224
GR V + D T + S QL+ +S + + NHR+++
Sbjct: 392 TGRRCVVAKDDVTAILTDPSGQAVPTQLQEKGKGLWEISYAPDI----TGNHRLEVKVNG 447
Query: 225 -------FDVNGRV----ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF- 272
FD+ + + + G EGS EG+L P VA+D G I+V + GN+R+QIF
Sbjct: 448 GSVAGSPFDIRMQSKDTPVLTIGREGSGEGELFNPTDVAMDMDGNIAVVEQGNSRVQIFD 507
Query: 273 TPDGQFLRAF 282
GQ LR F
Sbjct: 508 AKTGQSLRCF 517
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+L+F G +G + G + P GI V P +I+V + N R+QV +
Sbjct: 644 KLKFSFGEQGQDEGA-SKPTGITVDPAGNIIVVNVGNGRLQVFGSDGAYLRTVATVRGGV 702
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSD 127
P GIA+ PD+ I VA H V++++ +
Sbjct: 703 PCGIALTPDSHIAVACHFGHCVELYKYE 730
>gi|443723653|gb|ELU11980.1| hypothetical protein CAPTEDRAFT_183785 [Capitella teleta]
Length = 263
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 94/176 (53%), Gaps = 12/176 (6%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+A+ PD S+VV+D N+R+Q+F DGTF G P IA + + +++++D
Sbjct: 50 VALLPDGSVVVSDKVNNRIQIFDGDGTFSRTLVKRG-------RPLGIATNRSGQLVITD 102
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
+ + Q+ V+ DG + F + P Y++V +R++VSD N V
Sbjct: 103 LHRKQTQVG-----VYTVDGRCLRLFDPTCEDDIRPSTPCYVSVDPFDRILVSDRENQCV 157
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
++FD G +T GS + +L FPRG+ D +G + V D+G+ R+ +F+ DG+F
Sbjct: 158 KVFDERGLFLTRMGSRDPGDDRLAFPRGLCCDSKGNVMVCDTGHCRLALFSADGRF 213
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
L + Y+A+ V+VSD N+R+QIFD DGTF G P
Sbjct: 44 LSNAEYVALLPDGSVVVSDKVNNRIQIFD-------GDGTFSRTLVKRG-------RPLG 89
Query: 204 IAVSNTNRVIVSDSNNHRVQI--FDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISV 261
IA + + +++++D + + Q+ + V+GR + F ++ + P V+VD I V
Sbjct: 90 IATNRSGQLVITDLHRKQTQVGVYTVDGRCLRLFDPTCEDDIRPSTPCYVSVDPFDRILV 149
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D N +++F G FL G GD G+ S GN++VCD + R+ +F
Sbjct: 150 SDRENQCVKVFDERGLFLTRMGSRDPGDDRLAFPRGLCCDSKGNVMVCDTGHCRLALF 207
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 36 LQKRRLQFKIGSRGSEPGCFTWPRG-------IAVGPDNSIVVADSSNHRVQVCFPHFDL 88
L +RLQ S+ +P + + +A+ PD S+VV+D N+R+Q+ D
Sbjct: 18 LVAKRLQESEFSKYDQPAKLSKIKNGLSNAEYVALLPDGSVVVSDKVNNRIQIF--DGDG 75
Query: 89 KTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQ--VFQSDGTFVGKFGSMGNKAGQLEH 146
+ + P GIA +V+ D + Q V+ DG + F +
Sbjct: 76 TFSRTLVKRGRPLGIATNRSGQLVITDLHRKQTQVGVYTVDGRCLRLFDPTCEDDIRPST 135
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
P Y++V +R++VSD N V++FD G F+ + GS +L P +
Sbjct: 136 PCYVSVDPFDRILVSDRENQCVKVFD-------ERGLFLTRMGSRDPGDDRLAFPRGLCC 188
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
+ V+V D+ + R+ +F +GR + + S+ G L PR VA++
Sbjct: 189 DSKGNVMVCDTGHCRLALFSADGRFQQNLLT--SKHG-LSSPRDVALN 233
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 26/185 (14%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQV--------CFPHFDLKTNCVFLAFTWPRGIAVGPDN 109
P GIA +V+ D + QV C FD T P ++V P +
Sbjct: 87 PLGIATNRSGQLVITDLHRKQTQVGVYTVDGRCLRLFDPTCEDDIRPST-PCYVSVDPFD 145
Query: 110 SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 169
I+V+D N V+VF G F+ + GS +L P + + V+V D+ + R+
Sbjct: 146 RILVSDRENQCVKVFDERGLFLTRMGSRDPGDDRLAFPRGLCCDSKGNVMVCDTGHCRLA 205
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSNN------HRV 222
+F +GR Q+ K G L P +A++ T+ R++V+ N+ ++
Sbjct: 206 LFSADGRFQQN--LLTSKHG--------LSSPRDVALNRTSGRLVVAQHNSSASSSFRKI 255
Query: 223 QIFDV 227
+I+++
Sbjct: 256 RIYEI 260
>gi|260788708|ref|XP_002589391.1| hypothetical protein BRAFLDRAFT_77833 [Branchiostoma floridae]
gi|229274568|gb|EEN45402.1| hypothetical protein BRAFLDRAFT_77833 [Branchiostoma floridae]
Length = 760
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 143/301 (47%), Gaps = 48/301 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRG 102
+ G GS+ G F P G+AV D + VAD N+RVQV FDL N FL +T PR
Sbjct: 481 LRFGQLGSQQGQFDRPIGVAVRGDR-LYVADLGNNRVQV----FDLSGN--FL-YTLPRS 532
Query: 103 ---------IAVGPDNSIVVADSSNHRVQVFQSDGTFV-----GKFGSMGNKAGQLEHPH 148
+AV N +V S +V + G + GKF + +P+
Sbjct: 533 EHECMNPISLAVQEHNVVV---KSGLKVIKYSPFGELLYGFPLGKFST---------NPY 580
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDG-TFVGKFGSMGNKAGQLEHPHYIAVS 207
+AV RVIV+D NH + +F+ + + V K G G GQ P+++ V
Sbjct: 581 ALAVQRDGRVIVTDPGNHSILLFEADETMPNVKVIALVKKVGGQGQGEGQFNQPYFVCVD 640
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG-- 265
+ +IV+D +N+RVQ+FD + FG G + + P GV+ D +G I + + G
Sbjct: 641 KEDNIIVADKSNNRVQVFDKDLNFRHKFGQYGRQPQDMMGPHGVSADSRGNIVLANLGGT 700
Query: 266 ------NNRIQIFTPDGQFLRAFGCWGSGDGEFKGL-EGVAVMSNGNILVCDRENHRIQV 318
+ ++Q+F PDG ++ + DG+ L GVAV +G++ V D +H I+
Sbjct: 701 TDGVRHDMKLQVFRPDGSWISSI----CSDGDKLNLPHGVAVTEDGHVFVTDTGDHCIRK 756
Query: 319 F 319
+
Sbjct: 757 Y 757
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVD-DQGYISVGDSGNNRIQIFTPDGQFL 279
+ FG GS++GQ P GVAV D+ Y V D GNNR+Q+F G FL
Sbjct: 480 VLRFGQLGSQQGQFDRPIGVAVRGDRLY--VADLGNNRVQVFDLSGNFL 526
>gi|260796823|ref|XP_002593404.1| hypothetical protein BRAFLDRAFT_206799 [Branchiostoma floridae]
gi|229278628|gb|EEN49415.1| hypothetical protein BRAFLDRAFT_206799 [Branchiostoma floridae]
Length = 223
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 34/214 (15%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG-----------RVFQSDG 182
FG++G+ GQ PH +AVS+ + V+D+ N R+Q+F + G +++ D
Sbjct: 13 FGAVGSGTGQFRGPHGVAVSDEGDIFVADNRNQRIQVFTLQGTFVPTVLSSEQKMYPHDV 72
Query: 183 TFVGK-----FGSM----------GNKAGQ--LEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
G+ G++ G+ GQ ++ Y+ V ++VSD NH V ++
Sbjct: 73 ALDGEGNLWVVGNLWVVGDTKTDDGSTVGQQRMKKLLYVTVDGEGNILVSDCLNHCVFVY 132
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
+ +G+ FG EGS EG+LK+P+G+ D G I V D GN+R+++F GQFL
Sbjct: 133 NEDGQFQFKFGGEGSFEGRLKWPQGICTDTAGNIIVADWGNSRVEMFDKTGQFLEHITT- 191
Query: 286 GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ VA+ + G+++V +RE +R+ +F
Sbjct: 192 -----DMGRPWAVAMATQGHLVVTNREENRVSIF 220
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 53/230 (23%)
Query: 36 LQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-------------- 81
L +R + G+ GS G F P G+AV + I VAD+ N R+QV
Sbjct: 4 LGAQRQKVTFGAVGSGTGQFRGPHGVAVSDEGDIFVADNRNQRIQVFTLQGTFVPTVLSS 63
Query: 82 ---CFPH---FDLKTNCVFLAFTWPRG--------------------IAVGPDNSIVVAD 115
+PH D + N + W G + V + +I+V+D
Sbjct: 64 EQKMYPHDVALDGEGNLWVVGNLWVVGDTKTDDGSTVGQQRMKKLLYVTVDGEGNILVSD 123
Query: 116 SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 175
NH V V+ DG F KFG G+ G+L+ P I +IV+D N RV++FD G
Sbjct: 124 CLNHCVFVYNEDGQFQFKFGGEGSFEGRLKWPQGICTDTAGNIIVADWGNSRVEMFDKTG 183
Query: 176 RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
+ + T +G+ P +A++ ++V++ +RV IF
Sbjct: 184 QFLEHITTDMGR-------------PWAVAMATQGHLVVTNREENRVSIF 220
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 51/125 (40%), Gaps = 35/125 (28%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF------- 282
R +FG+ GS GQ + P GVAV D+G I V D+ N RIQ+FT G F+
Sbjct: 8 RQKVTFGAVGSGTGQFRGPHGVAVSDEGDIFVADNRNQRIQVFTLQGTFVPTVLSSEQKM 67
Query: 283 -----------------GCWGSGDGE-----------FKGLEGVAVMSNGNILVCDRENH 314
W GD + K L V V GNILV D NH
Sbjct: 68 YPHDVALDGEGNLWVVGNLWVVGDTKTDDGSTVGQQRMKKLLYVTVDGEGNILVSDCLNH 127
Query: 315 RIQVF 319
+ V+
Sbjct: 128 CVFVY 132
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + QFK G GS G WP+GI +I+VAD N RV++ FD KT
Sbjct: 132 YNEDGQFQFKFGGEGSFEGRLKWPQGICTDTAGNIIVADWGNSRVEM----FD-KTGQFL 186
Query: 95 LAFTW----PRGIAVGPDNSIVVADSSNHRVQVFQS 126
T P +A+ +VV + +RV +F +
Sbjct: 187 EHITTDMGRPWAVAMATQGHLVVTNREENRVSIFHN 222
>gi|260815213|ref|XP_002602368.1| hypothetical protein BRAFLDRAFT_135712 [Branchiostoma floridae]
gi|229287677|gb|EEN58380.1| hypothetical protein BRAFLDRAFT_135712 [Branchiostoma floridae]
Length = 645
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 130/296 (43%), Gaps = 31/296 (10%)
Query: 22 SGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV 81
S + Q+ SQ L+ L +G G G F +P ++ D I+VAD N+R+Q+
Sbjct: 374 SQVSQLSQVRPSQSLRGPHLLQAVGKNGDGDGEFDFPTSLSATVDRDIIVADHDNNRLQI 433
Query: 82 CFP------HFDLKTNCVFLA-FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKF 134
DL+ + F+A T + G + I V D +V Q +G
Sbjct: 434 LDKDGVFRRKIDLRFSPWFVAALTNGDMLVTGDRHRIHVLDRQGREARVIQVEGAVESDE 493
Query: 135 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK 194
++G +AV R++V+ Q+F V +S G + FG G
Sbjct: 494 NTLG-----------VAVDGLGRIVVTVG----YQVF-----VLRSSGETLSYFGEKGGG 533
Query: 195 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
QL+ +A ++ N ++VSD NH V+IFD GR + + + GS +GQL P V D
Sbjct: 534 RHQLQSELRVATNSLNHIVVSDYINHNVKIFDPAGRHLRTCSAFGSGDGQLNRPECVITD 593
Query: 255 DQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
+ V D NN + F DG F+R G+ GVAV +G +LVCD
Sbjct: 594 VNDDVIVADCRNNGVSQFRQDGSFVRHIVTRGT----LLRPMGVAVTHDGRVLVCD 645
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F +P ++ D I+VAD N+R+Q+ DG F K L + + TN
Sbjct: 407 FDFPTSLSATVDRDIIVADHDNNRLQILDKDGVFRRKID--------LRFSPWFVAALTN 458
Query: 157 RVIVSDSNNHRVQIFDVNGR---VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
++ + HR+ + D GR V Q +G ++G +AV R++
Sbjct: 459 GDMLVTGDRHRIHVLDRQGREARVIQVEGAVESDENTLG-----------VAVDGLGRIV 507
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
V+ ++V + +G ++ FG +G QL+ VA + +I V D N+ ++IF
Sbjct: 508 VT--VGYQVFVLRSSGETLSYFGEKGGGRHQLQSELRVATNSLNHIVVSDYINHNVKIFD 565
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
P G+ LR +GSGDG+ E V N +++V D N+ + F
Sbjct: 566 PAGRHLRTCSAFGSGDGQLNRPECVITDVNDDVIVADCRNNGVSQF 611
>gi|196001865|ref|XP_002110800.1| hypothetical protein TRIADDRAFT_17277 [Trichoplax adhaerens]
gi|190586751|gb|EDV26804.1| hypothetical protein TRIADDRAFT_17277, partial [Trichoplax
adhaerens]
Length = 124
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 76/124 (61%)
Query: 196 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD 255
G+L+ P + S + V+D+ NH ++IFD +G V GS G E GQ P G+A+D
Sbjct: 1 GRLDLPIGVVASEEGFIHVTDTANHCIKIFDPHGTVKKVLGSYGKEAGQFHEPHGIAIDQ 60
Query: 256 QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHR 315
+G + + DS N+RIQ+ TP+G+ L FG GS +G FK G++ S G + V DR+N R
Sbjct: 61 RGNLVIADSNNDRIQVLTPEGRVLCHFGGSGSAEGCFKRPSGISFDSQGVLYVSDRDNQR 120
Query: 316 IQVF 319
+Q+F
Sbjct: 121 VQLF 124
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 74/131 (56%), Gaps = 7/131 (5%)
Query: 142 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP 201
G+L+ P + S + V+D+ NH ++IFD +G V + GS G +AGQ P
Sbjct: 1 GRLDLPIGVVASEEGFIHVTDTANHCIKIFDPHGTVKKV-------LGSYGKEAGQFHEP 53
Query: 202 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISV 261
H IA+ ++++DSNN R+Q+ GRV+ FG GS EG K P G++ D QG + V
Sbjct: 54 HGIAIDQRGNLVIADSNNDRIQVLTPEGRVLCHFGGSGSAEGCFKRPSGISFDSQGVLYV 113
Query: 262 GDSGNNRIQIF 272
D N R+Q+F
Sbjct: 114 SDRDNQRVQLF 124
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
P G+ + I V D++NH +++F GT GS G +AGQ PH IA+
Sbjct: 3 LDLPIGVVASEEGFIHVTDTANHCIKIFDPHGTVKKVLGSYGKEAGQFHEPHGIAIDQRG 62
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++++DSNN R+Q+ GRV + FG G+ G + P I+ + + VSD
Sbjct: 63 NLVIADSNNDRIQVLTPEGRV-------LCHFGGSGSAEGCFKRPSGISFDSQGVLYVSD 115
Query: 217 SNNHRVQIF 225
+N RVQ+F
Sbjct: 116 RDNQRVQLF 124
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWPRGIAVGP 107
G P G+ + I V D++NH +++ PH +K F P GIA+
Sbjct: 1 GRLDLPIGVVASEEGFIHVTDTANHCIKIFDPHGTVKKVLGSYGKEAGQFHEPHGIAIDQ 60
Query: 108 DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 167
++V+ADS+N R+QV +G + FG G+ G + P I+ + + VSD +N R
Sbjct: 61 RGNLVIADSNNDRIQVLTPEGRVLCHFGGSGSAEGCFKRPSGISFDSQGVLYVSDRDNQR 120
Query: 168 VQIF 171
VQ+F
Sbjct: 121 VQLF 124
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-------LAF 97
+GS G E G F P GIA+ ++V+ADS+N R+QV P + + C F F
Sbjct: 40 LGSYGKEAGQFHEPHGIAIDQRGNLVIADSNNDRIQVLTP--EGRVLCHFGGSGSAEGCF 97
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVF 124
P GI+ + V+D N RVQ+F
Sbjct: 98 KRPSGISFDSQGVLYVSDRDNQRVQLF 124
>gi|290978334|ref|XP_002671891.1| predicted protein [Naegleria gruberi]
gi|284085463|gb|EFC39147.1| predicted protein [Naegleria gruberi]
Length = 305
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 132/277 (47%), Gaps = 23/277 (8%)
Query: 51 EPGCFTWPRGIAVGPDN-SIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDN 109
+PG F P + + ++ +I V+D+ N R+Q F F + P +AV +
Sbjct: 43 QPGNFNNPIDVKISFEHHTIFVSDNGNQRIQ-AFDLFSQEFKYTIDTPDKPLYMAVDHKD 101
Query: 110 SIVVADSSNHRVQVFQ--SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSNNH 166
++ N V + +D + S L P IAV +TN + VSDS
Sbjct: 102 DSLIVTCENSCVYKYSLCNDHNLLWSLES----KELLSKPQGIAVDDTNGNIFVSDS--- 154
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNHRVQIF 225
+V + G+ F+ G G Q P+ I +SN N +IV+D N+RVQI
Sbjct: 155 KVVLVSRQGK-------FIRHIGGEGKGPMQFHAPNGIGISNRDNFLIVTDMKNNRVQIM 207
Query: 226 DVNGR-VITSFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIFTPDGQFLRAFG 283
NG I FG +G +P G+ VD G I V DS NNRIQ+F+P G+F+++FG
Sbjct: 208 SKNGDDFIYMFGKKGISNSDFLYPTGLTVDKPTGNIIVCDSSNNRIQVFSPRGEFIKSFG 267
Query: 284 CWGSGDGEFKGLEGVAV-MSNGNILVCDRENHRIQVF 319
G+G E G+ + + G + V D +N+RIQ++
Sbjct: 268 SKGNGPLELVNPTGLTINIRTGELYVVDNKNNRIQIY 304
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVG-PDNSIVVADSSNHRVQVC------FPHFDLKTNCVFLAF 97
IG G P F P GI + DN ++V D N+RVQ+ F + K F
Sbjct: 169 IGGEGKGPMQFHAPNGIGISNRDNFLIVTDMKNNRVQIMSKNGDDFIYMFGKKGISNSDF 228
Query: 98 TWPRGIAVG-PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NT 155
+P G+ V P +I+V DSSN+R+QVF G F+ FGS GN +L +P + ++ T
Sbjct: 229 LYPTGLTVDKPTGNIIVCDSSNNRIQVFSPRGEFIKSFGSKGNGPLELVNPTGLTINIRT 288
Query: 156 NRVIVSDSNNHRVQIF 171
+ V D+ N+R+QI+
Sbjct: 289 GELYVVDNKNNRIQIY 304
>gi|383763992|ref|YP_005442974.1| hypothetical protein CLDAP_30370 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384260|dbj|BAM01077.1| hypothetical protein CLDAP_30370 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 1106
Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 72/238 (30%), Positives = 113/238 (47%), Gaps = 28/238 (11%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD-----LKTNCVF----------LAF 97
G F P G+AV I VAD+ N R+QV FD L+ VF A
Sbjct: 876 GQFYEPWGVAVDEAGQIFVADTWNGRIQV----FDSEGRFLRKWGVFATTGGELGDPYAL 931
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN- 156
PRG+A+ D +++VAD+ N R+ F G + + G G AG+ E P +AV T+
Sbjct: 932 FGPRGLAIDLDGNLLVADTGNKRILKFTPTGELIKQVGGGGVIAGRFEEPTAVAVDPTDG 991
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
V+++D+ N R+Q D + G+F + G + Y+ V+ + +D
Sbjct: 992 SVLIADAWNGRIQ-------RLSPDLEYRGEFPTPGWVGRDVFQKPYLTVAADGLIYATD 1044
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD-DQGYISVGDSGNNRIQIFT 273
V +FD +G V+ +FG G++ ++ P G+A D I V D NNR+ +F+
Sbjct: 1045 PATALVMVFDRDGNVVAAFGGPGNDASRIGQPNGIAADLANRLILVADGVNNRVMVFS 1102
Score = 98.2 bits (243), Expect = 4e-18, Method: Composition-based stats.
Identities = 83/295 (28%), Positives = 128/295 (43%), Gaps = 40/295 (13%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQV--------------CFPHFDLKTNCVF------LA- 96
PR + V P + V+AD+ NHR+ V C + T C+ LA
Sbjct: 814 PRAVTVAPGGNRVIADTGNHRIVVLDSNGQFLRAFGSFCNVNDPANTPCIDPDGDGPLAL 873
Query: 97 ----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY--- 149
F P G+AV I VAD+ N R+QVF S+G F+ K+G G+L P+
Sbjct: 874 GDGQFYEPWGVAVDEAGQIFVADTWNGRIQVFDSEGRFLRKWGVFATTGGELGDPYALFG 933
Query: 150 ---IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
+A+ ++V+D+ N R+ F G + + G G AG+ E P +AV
Sbjct: 934 PRGLAIDLDGNLLVADTGNKRI-------LKFTPTGELIKQVGGGGVIAGRFEEPTAVAV 986
Query: 207 SNTN-RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG 265
T+ V+++D+ N R+Q + F + G + + V G I D
Sbjct: 987 DPTDGSVLIADAWNGRIQRLSPDLEYRGEFPTPGWVGRDVFQKPYLTVAADGLIYATDPA 1046
Query: 266 NNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV-MSNGNILVCDRENHRIQVF 319
+ +F DG + AFG G+ G+A ++N ILV D N+R+ VF
Sbjct: 1047 TALVMVFDRDGNVVAAFGGPGNDASRIGQPNGIAADLANRLILVADGVNNRVMVF 1101
Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 34 QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN-- 91
++L+K + G +P PRG+A+ D +++VAD+ N R+ P +L
Sbjct: 910 RFLRKWGVFATTGGELGDPYALFGPRGLAIDLDGNLLVADTGNKRILKFTPTGELIKQVG 969
Query: 92 ---CVFLAFTWPRGIAVGP-DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHP 147
+ F P +AV P D S+++AD+ N R+Q D + G+F + G +
Sbjct: 970 GGGVIAGRFEEPTAVAVDPTDGSVLIADAWNGRIQRLSPDLEYRGEFPTPGWVGRDVFQK 1029
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
Y+ V+ + +D V +FD DG V FG GN A ++ P+ IA
Sbjct: 1030 PYLTVAADGLIYATDPATALVMVFD-------RDGNVVAAFGGPGNDASRIGQPNGIAAD 1082
Query: 208 NTNRVI-VSDSNNHRVQIF 225
NR+I V+D N+RV +F
Sbjct: 1083 LANRLILVADGVNNRVMVF 1101
>gi|260824639|ref|XP_002607275.1| hypothetical protein BRAFLDRAFT_88223 [Branchiostoma floridae]
gi|229292621|gb|EEN63285.1| hypothetical protein BRAFLDRAFT_88223 [Branchiostoma floridae]
Length = 661
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 115/263 (43%), Gaps = 55/263 (20%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P +AV D IVV D N R+Q DG+F K +LE V+ TN
Sbjct: 412 FLSPTSLAVTTDGDIVVTDYHNRRLQFLDKDGSF--------KKKVELEFKPGCVVALTN 463
Query: 157 RVIVSDSNNHRVQIFDVNGR-------------------------------------VFQ 179
++ + H++ + D GR V
Sbjct: 464 GDLLVTGDGHKIHVLDKQGRAARVIQVTGVAENDKTTQGISVDGLGRIIVTFGYQVFVLS 523
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
G + KFG G L + V+++N++IVSD++NH ++IFD GR + + GS G
Sbjct: 524 PSGDVILKFGDKGQGPQLLSSYLRLTVNSSNKIIVSDNDNHNLKIFDSAGRHLFTCGSHG 583
Query: 240 SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE--- 296
S GQL +P V D + I + D GN+R+ +F+ DG F+R E GL
Sbjct: 584 SGPGQLTYPCCVITDSEDNIIMADCGNHRVSLFSQDGTFIRHVLTR-----EEHGLNYPL 638
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
G+ + +G+++V D H I++F
Sbjct: 639 GLTLTQDGHLVVSD--CHSIKMF 659
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 18/191 (9%)
Query: 129 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKF 188
T + G G+ GQ P +AV+ ++V+D +N R+Q D DG+F
Sbjct: 397 TLLKTVGQRGSGDGQFLSPTSLAVTTDGDIVVTDYHNRRLQFLD-------KDGSF---- 445
Query: 189 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFP 248
K +LE V+ TN ++ + H++ + D GR G E K
Sbjct: 446 ----KKKVELEFKPGCVVALTNGDLLVTGDGHKIHVLDKQGRAARVIQVTGVAEND-KTT 500
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
+G++VD G I V + ++ + +P G + FG G G + V S+ I+V
Sbjct: 501 QGISVDGLGRIIV--TFGYQVFVLSPSGDVILKFGDKGQGPQLLSSYLRLTVNSSNKIIV 558
Query: 309 CDRENHRIQVF 319
D +NH +++F
Sbjct: 559 SDNDNHNLKIF 569
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------ 96
K G +G P + + V N I+V+D+ NH +++ FD +F
Sbjct: 530 LKFGDKGQGPQLLSSYLRLTVNSSNKIIVSDNDNHNLKI----FDSAGRHLFTCGSHGSG 585
Query: 97 ---FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
T+P + +++I++AD NHRV +F DGTF+ + + L +P + ++
Sbjct: 586 PGQLTYPCCVITDSEDNIIMADCGNHRVSLFSQDGTFIRHV--LTREEHGLNYPLGLTLT 643
Query: 154 NTNRVIVSDSNNHRVQIFDV 173
++VSD H +++F V
Sbjct: 644 QDGHLVVSDC--HSIKMFKV 661
>gi|312082624|ref|XP_003143521.1| RING finger protein nhl-1 [Loa loa]
Length = 1036
Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/135 (40%), Positives = 71/135 (52%), Gaps = 7/135 (5%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G+K G+L P +AV N V DS+NHR+ IF+ GR+ + FG G+
Sbjct: 860 FGKKGSKEGELNWPRGLAVLGGNEFAVCDSSNHRICIFNTGGRLLR-------MFGKYGS 912
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
QL+ I S +IVSD NHR+ IFD NG + FG G G+ P GVAV
Sbjct: 913 GDAQLDSAAGICCSRYKHLIVSDRYNHRIMIFDQNGHCVKKFGGHGPSSGRFNNPWGVAV 972
Query: 254 DDQGYISVGDSGNNR 268
DD G I V D +N+
Sbjct: 973 DDMGMIYVVDKLHNK 987
Score = 87.0 bits (214), Expect = 9e-15, Method: Composition-based stats.
Identities = 54/153 (35%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 174 NGRVFQSDG-----TFVGK------FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
+GR+FQ+ +V K FG G+K G+L P +AV N V DS+NHR+
Sbjct: 835 DGRLFQAPRFICTVDYVAKAKPKLVFGKKGSKEGELNWPRGLAVLGGNEFAVCDSSNHRI 894
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
IF+ GR++ FG GS + QL G+ ++ V D N+RI IF +G ++ F
Sbjct: 895 CIFNTGGRLLRMFGKYGSGDAQLDSAAGICCSRYKHLIVSDRYNHRIMIFDQNGHCVKKF 954
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHR 315
G G G F GVAV G I V D+ +++
Sbjct: 955 GGHGPSSGRFNNPWGVAVDDMGMIYVVDKLHNK 987
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 52/155 (33%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
WPRG+AV N V DSSNHR+ +F + G + FG G+ QL+ I S
Sbjct: 870 LNWPRGLAVLGGNEFAVCDSSNHRICIFNTGGRLLRMFGKYGSGDAQLDSAAGICCSRYK 929
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+IVSD NHR+ IFD NG V KFG G +G+ +P +AV + + V D
Sbjct: 930 HLIVSDRYNHRIMIFDQNGHC-------VKKFGGHGPSSGRFNNPWGVAVDDMGMIYVVD 982
Query: 217 SNNHRVQIFDVNGRVITSFGS--EGSEEGQLKFPR 249
+++ +V+G + ++E Q PR
Sbjct: 983 KLHNKSAGANVSGENMCCLAILLNRTDESQAFVPR 1017
Score = 79.7 bits (195), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 53/85 (62%)
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
FG +GS+EG+L +PRG+AV +V DS N+RI IF G+ LR FG +GSGD +
Sbjct: 860 FGKKGSKEGELNWPRGLAVLGGNEFAVCDSSNHRICIFNTGGRLLRMFGKYGSGDAQLDS 919
Query: 295 LEGVAVMSNGNILVCDRENHRIQVF 319
G+ +++V DR NHRI +F
Sbjct: 920 AAGICCSRYKHLIVSDRYNHRIMIF 944
Score = 70.9 bits (172), Expect = 8e-10, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 25 GQVGTTPR----SQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ 80
G++ PR Y+ K + + G +GS+ G WPRG+AV N V DSSNHR
Sbjct: 836 GRLFQAPRFICTVDYVAKAKPKLVFGKKGSKEGELNWPRGLAVLGGNEFAVCDSSNHR-- 893
Query: 81 VCFPHFDLKTNCVFLAF-------TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGK 133
+C + + +F + GI ++V+D NHR+ +F +G V K
Sbjct: 894 ICIFNTGGRLLRMFGKYGSGDAQLDSAAGICCSRYKHLIVSDRYNHRIMIFDQNGHCVKK 953
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 175
FG G +G+ +P +AV + + V D +++ +V+G
Sbjct: 954 FGGHGPSSGRFNNPWGVAVDDMGMIYVVDKLHNKSAGANVSG 995
>gi|290995070|ref|XP_002680154.1| predicted protein [Naegleria gruberi]
gi|284093774|gb|EFC47410.1| predicted protein [Naegleria gruberi]
Length = 636
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 138/299 (46%), Gaps = 41/299 (13%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT--------------NCVFLAFTWPRGI 103
P GIA+ + I +AD N+R++ + T + + +P G+
Sbjct: 271 PSGIAISSSDEIYIADMFNNRIRKITTSGIISTIAGTGTSGYSGDGSSATSIQLYFPYGV 330
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-----SNTNRV 158
AV + I +AD N+R++ + G G +G+ G YI S++ +
Sbjct: 331 AVSLSDEIYIADMFNNRIRKITTSGIISTIAGGIGD--GLSATTAYINAITFEFSSSGEI 388
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA--GQLEHPHYIAVSNTNRVIVSD 216
++D+NNHR++ +G + GT + G+ A QL P+ IA+S++ + ++D
Sbjct: 389 YIADTNNHRIRKITTSGIISTIAGTGTSGYSGDGSSATSAQLNSPYGIAISSSGEIYIAD 448
Query: 217 SNNHRVQIFDVNGRV--ITSFGSEG-------SEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+NN+R++ +G + I G++G + QL P GVA+ +G I V D NN
Sbjct: 449 TNNNRIRKITTSGIISTIAGTGTQGYSGDGSSATSAQLYNPYGVAISSRGEIYVADYNNN 508
Query: 268 RIQIFTPDG--QFLRAFGCWG-SGDG------EFKGLEGVAVMSNGNILVCDRENHRIQ 317
RI+ T G + G G SGDG + GVA+ S+ I + D N+RI+
Sbjct: 509 RIRKITTSGIISTIAGTGTSGYSGDGSSAISAQLYNPYGVAISSSDEIYITDTNNNRIR 567
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 139/302 (46%), Gaps = 41/302 (13%)
Query: 57 WPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT--------------NCVFLAFTWPRG 102
+P GIA+ + +AD++NHR++ + T + +P G
Sbjct: 48 YPSGIAISSSDETYIADTNNHRIRKITTSGIISTIAGNGTAGYSGDGSSAKSAQLYYPSG 107
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFV-----GKFGSMGNKA--GQLEHPHYIAVSNT 155
+A+ + I + D SN+R++ + G G G G+ A +L +P IA+S++
Sbjct: 108 VAISSSDEIYIVDRSNNRIRKITTSGIISTIAGNGTAGYSGDVATSAKLYYPSGIAISSS 167
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN--KAGQLEHPHYIAVSNTNRVI 213
+ ++D+NNHR++ +G + G + G+ K+ QL +P +A+S+++ +
Sbjct: 168 DETYIADTNNHRIRKITTSGIISTIAGNGTAGYSGDGSSAKSAQLYYPSGVAISSSDEIY 227
Query: 214 VSDSNNHRVQIFDVNGRVIT-------SFGSEGSE--EGQLKFPRGVAVDDQGYISVGDS 264
+ D +N+R++ +G + T + +GS QL P G+A+ I + D
Sbjct: 228 IVDRSNNRIRKITTSGIISTIAGNGTAGYSGDGSSATSAQLNSPSGIAISSSDEIYIADM 287
Query: 265 GNNRIQIFTPDG--QFLRAFGCWG-SGDG------EFKGLEGVAVMSNGNILVCDRENHR 315
NNRI+ T G + G G SGDG + GVAV + I + D N+R
Sbjct: 288 FNNRIRKITTSGIISTIAGTGTSGYSGDGSSATSIQLYFPYGVAVSLSDEIYIADMFNNR 347
Query: 316 IQ 317
I+
Sbjct: 348 IR 349
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 132/302 (43%), Gaps = 45/302 (14%)
Query: 57 WPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT--------------NCVFLAFTWPRG 102
+P G+A+ + I + D SN+R++ + T + P G
Sbjct: 214 YPSGVAISSSDEIYIVDRSNNRIRKITTSGIISTIAGNGTAGYSGDGSSATSAQLNSPSG 273
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTF-----VGKFGSMGNKAG----QLEHPHYIAVS 153
IA+ + I +AD N+R++ + G G G G+ + QL P+ +AVS
Sbjct: 274 IAISSSDEIYIADMFNNRIRKITTSGIISTIAGTGTSGYSGDGSSATSIQLYFPYGVAVS 333
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
++ + ++D N+R++ +G + T G G + + S++ +
Sbjct: 334 LSDEIYIADMFNNRIRKITTSGII----STIAGGIGDGLSATTAYINAITFEFSSSGEIY 389
Query: 214 VSDSNNHRVQIFDVNGRVITSFGS-------EGSE--EGQLKFPRGVAVDDQGYISVGDS 264
++D+NNHR++ +G + T G+ +GS QL P G+A+ G I + D+
Sbjct: 390 IADTNNHRIRKITTSGIISTIAGTGTSGYSGDGSSATSAQLNSPYGIAISSSGEIYIADT 449
Query: 265 GNNRIQIFTPDG--QFLRAFGCWG-SGDG------EFKGLEGVAVMSNGNILVCDRENHR 315
NNRI+ T G + G G SGDG + GVA+ S G I V D N+R
Sbjct: 450 NNNRIRKITTSGIISTIAGTGTQGYSGDGSSATSAQLYNPYGVAISSRGEIYVADYNNNR 509
Query: 316 IQ 317
I+
Sbjct: 510 IR 511
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 28/246 (11%)
Query: 57 WPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC--------VFLAFTWPRGIAVGPD 108
+P G+AV + I +AD N+R++ + T A+
Sbjct: 326 FPYGVAVSLSDEIYIADMFNNRIRKITTSGIISTIAGGIGDGLSATTAYINAITFEFSSS 385
Query: 109 NSIVVADSSNHRVQVFQSDGTF-----VGKFGSMGN----KAGQLEHPHYIAVSNTNRVI 159
I +AD++NHR++ + G G G G+ + QL P+ IA+S++ +
Sbjct: 386 GEIYIADTNNHRIRKITTSGIISTIAGTGTSGYSGDGSSATSAQLNSPYGIAISSSGEIY 445
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA--GQLEHPHYIAVSNTNRVIVSDS 217
++D+NN+R++ +G + GT + G+ A QL +P+ +A+S+ + V+D
Sbjct: 446 IADTNNNRIRKITTSGIISTIAGTGTQGYSGDGSSATSAQLYNPYGVAISSRGEIYVADY 505
Query: 218 NNHRVQIFDVNGRVITSFGS-------EGSE--EGQLKFPRGVAVDDQGYISVGDSGNNR 268
NN+R++ +G + T G+ +GS QL P GVA+ I + D+ NNR
Sbjct: 506 NNNRIRKITTSGIISTIAGTGTSGYSGDGSSAISAQLYNPYGVAISSSDEIYITDTNNNR 565
Query: 269 IQIFTP 274
I+ +P
Sbjct: 566 IRKLSP 571
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 100/196 (51%), Gaps = 20/196 (10%)
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN--KAGQL 198
+ +L +P IA+S+++ ++D+NNHR++ +G + G + G+ K+ QL
Sbjct: 43 SAKLYYPSGIAISSSDETYIADTNNHRIRKITTSGIISTIAGNGTAGYSGDGSSAKSAQL 102
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSE--------EGQLKFPRG 250
+P +A+S+++ + + D +N+R++ +G +I++ G+ +L +P G
Sbjct: 103 YYPSGVAISSSDEIYIVDRSNNRIRKITTSG-IISTIAGNGTAGYSGDVATSAKLYYPSG 161
Query: 251 VAVDDQGYISVGDSGNNRIQIFTPDG--QFLRAFGCWG-SGDG------EFKGLEGVAVM 301
+A+ + D+ N+RI+ T G + G G SGDG + GVA+
Sbjct: 162 IAISSSDETYIADTNNHRIRKITTSGIISTIAGNGTAGYSGDGSSAKSAQLYYPSGVAIS 221
Query: 302 SNGNILVCDRENHRIQ 317
S+ I + DR N+RI+
Sbjct: 222 SSDEIYIVDRSNNRIR 237
>gi|260784380|ref|XP_002587245.1| hypothetical protein BRAFLDRAFT_176686 [Branchiostoma floridae]
gi|229272386|gb|EEN43256.1| hypothetical protein BRAFLDRAFT_176686 [Branchiostoma floridae]
Length = 151
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 84/147 (57%), Gaps = 9/147 (6%)
Query: 135 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK 194
G G AGQ +HP +AVS+ + V+D N R+Q+F + G TFV +F +
Sbjct: 12 GGKGLAAGQFKHPFGVAVSDDGEIFVADCGNKRIQVFTLQG-------TFVRQFPTALPG 64
Query: 195 AGQL--EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
G++ P IAV+ + VSD+N + +++ +G+ + FG GS EGQLK+PRG+
Sbjct: 65 KGRMFMVSPWSIAVTEDGNIYVSDNNKSYIYVYNKDGQFLFKFGGNGSGEGQLKYPRGIC 124
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFL 279
D G I V D+ N+R+++F +G FL
Sbjct: 125 ADKAGNIVVADASNSRVEMFDKNGGFL 151
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 74/133 (55%), Gaps = 2/133 (1%)
Query: 189 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF- 247
G G AGQ +HP +AVS+ + V+D N R+Q+F + G + F + +G++
Sbjct: 12 GGKGLAAGQFKHPFGVAVSDDGEIFVADCGNKRIQVFTLQGTFVRQFPTALPGKGRMFMV 71
Query: 248 -PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNI 306
P +AV + G I V D+ + I ++ DGQFL FG GSG+G+ K G+ GNI
Sbjct: 72 SPWSIAVTEDGNIYVSDNNKSYIYVYNKDGQFLFKFGGNGSGEGQLKYPRGICADKAGNI 131
Query: 307 LVCDRENHRIQVF 319
+V D N R+++F
Sbjct: 132 VVADASNSRVEMF 144
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC---------FPHFD 87
Q+ + IG +G G F P G+AV D I VAD N R+QV FP
Sbjct: 3 QREHQRLTIGGKGLAAGQFKHPFGVAVSDDGEIFVADCGNKRIQVFTLQGTFVRQFPTAL 62
Query: 88 LKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHP 147
+F+ W IAV D +I V+D++ + V+ DG F+ KFG G+ GQL++P
Sbjct: 63 PGKGRMFMVSPWS--IAVTEDGNIYVSDNNKSYIYVYNKDGQFLFKFGGNGSGEGQLKYP 120
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNG 175
I ++V+D++N RV++FD NG
Sbjct: 121 RGICADKAGNIVVADASNSRVEMFDKNG 148
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+ G +G GQ K P GVAV D G I V D GN RIQ+FT G F+R F G G
Sbjct: 10 TIGGKGLAAGQFKHPFGVAVSDDGEIFVADCGNKRIQVFTLQGTFVRQFPTALPGKGRMF 69
Query: 294 GLE--GVAVMSNGNILVCDRENHRIQVF 319
+ +AV +GNI V D I V+
Sbjct: 70 MVSPWSIAVTEDGNIYVSDNNKSYIYVY 97
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV 81
Y + + FK G GS G +PRGI +IVVAD+SN RV++
Sbjct: 97 YNKDGQFLFKFGGNGSGEGQLKYPRGICADKAGNIVVADASNSRVEM 143
>gi|431798812|ref|YP_007225716.1| gluconolactonase [Echinicola vietnamensis DSM 17526]
gi|430789577|gb|AGA79706.1| gluconolactonase [Echinicola vietnamensis DSM 17526]
Length = 428
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 117/246 (47%), Gaps = 23/246 (9%)
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ--------LEHP 147
AF P G+ + PD ++V D +N+ ++ +DG G+ GN Q L++P
Sbjct: 130 AFRNPEGVTMHPDGYLIVTDRANNSIRKVTTDGAVSTVLGT-GNSGFQNGPVASALLDYP 188
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
V + V+D +NH ++ D G V GT F + Q + P IAV+
Sbjct: 189 WKSCVDMEGNIYVADRDNHMIRKIDPQGMVSTVAGTGEAGFADGPAEEAQFDQPLDIAVT 248
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSE------GSEEGQLKFPRGVAVDDQGYISV 261
+ V+D+ NHR++ +V+G V T GSE EE ++P G+ VDD G I V
Sbjct: 249 AEGVLYVTDNRNHRIRKIEVDGTVSTVAGSEQGNQDGALEEATFRYPSGLDVDDMGNIYV 308
Query: 262 GDSGNNRI-QIFTPDGQF--LRAFGCWGSGDG-----EFKGLEGVAVMSNGNILVCDREN 313
D N+ I +I GQ + G G+ DG +F G++V NG ++V D N
Sbjct: 309 ADRINHLIRKIDLNAGQVSTVAGDGSQGTRDGQVMTAQFNNPYGISVADNGQLVVADLSN 368
Query: 314 HRIQVF 319
H+I++
Sbjct: 369 HKIRLI 374
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 130/309 (42%), Gaps = 60/309 (19%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT--------------NCVFLAFTW 99
F P G+ + PD ++V D +N+ ++ + T L + W
Sbjct: 130 AFRNPEGVTMHPDGYLIVTDRANNSIRKVTTDGAVSTVLGTGNSGFQNGPVASALLDYPW 189
Query: 100 PRGIAVGPDNSIVVADSSNHRVQ-------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
V + +I VAD NH ++ V GT F + Q + P IAV
Sbjct: 190 KS--CVDMEGNIYVADRDNHMIRKIDPQGMVSTVAGTGEAGFADGPAEEAQFDQPLDIAV 247
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE-----HPHYIAVS 207
+ + V+D+ NHR++ +V+G V G+ GN+ G LE +P + V
Sbjct: 248 TAEGVLYVTDNRNHRIRKIEVDGTVSTVAGS------EQGNQDGALEEATFRYPSGLDVD 301
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSF---GSEGSEEGQLKF-----PRGVAVDDQGYI 259
+ + V+D NH ++ D+N +++ GS+G+ +GQ+ P G++V D G +
Sbjct: 302 DMGNIYVADRINHLIRKIDLNAGQVSTVAGDGSQGTRDGQVMTAQFNNPYGISVADNGQL 361
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMS-----------NGNILV 308
V D N++I++ + A G L+GV V S +G I V
Sbjct: 362 VVADLSNHKIRLIQGENVITIAGSVAGF-------LDGVGVTSQFYNPTDVTYHDGVIYV 414
Query: 309 CDRENHRIQ 317
D NHR++
Sbjct: 415 ADLGNHRVR 423
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 26/195 (13%)
Query: 50 SEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-------------LA 96
+E F P IAV + + V D+ NHR++ D + V
Sbjct: 234 AEEAQFDQPLDIAVTAEGVLYVTDNRNHRIRKI--EVDGTVSTVAGSEQGNQDGALEEAT 291
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDG---TFVGKFGSMGNKAGQL-----EHPH 148
F +P G+ V +I VAD NH ++ + + V GS G + GQ+ +P+
Sbjct: 292 FRYPSGLDVDDMGNIYVADRINHLIRKIDLNAGQVSTVAGDGSQGTRDGQVMTAQFNNPY 351
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 208
I+V++ +++V+D +NH++++ V G+ G +G + Q +P + +
Sbjct: 352 GISVADNGQLVVADLSNHKIRLIQ-GENVITIAGSVAGFLDGVGVTS-QFYNPTDVTYHD 409
Query: 209 TNRVIVSDSNNHRVQ 223
+ V+D NHRV+
Sbjct: 410 -GVIYVADLGNHRVR 423
>gi|222055728|ref|YP_002538090.1| NHL repeat containing protein [Geobacter daltonii FRC-32]
gi|221565017|gb|ACM20989.1| NHL repeat containing protein [Geobacter daltonii FRC-32]
Length = 343
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 25/234 (10%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------AFTWPRGIAVG 106
+ P G+AV ++ V+DS N +V + N FL F+ P GIAV
Sbjct: 123 VLSSPVGVAVDSAKNLYVSDSLNGKV------YKYDKNGKFLGELKPEKPFSRPAGIAVN 176
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
+ V D H++ +F + F F ++ +L +P +AV +++ V ++DS N
Sbjct: 177 SKDEKYVVDVLAHKLYLFDKEDRFKSPF-PRESEDQELSYPSNVAVDSSDNVYITDSMNF 235
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
+ + F DG GK G +G+ G P IA+ + V D+ QIF+
Sbjct: 236 TI-------KKFTPDGELKGKIGDIGDAPGSFARPKGIAIDGEGHLYVIDATLDDFQIFN 288
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
G+++ G G+ G+ P G+ +D + +I + D+ N+R+Q+F Q+LR
Sbjct: 289 SGGKLLLHVGKNGARPGEFYLPSGIYIDKKDHIFIADTYNSRVQVF----QYLR 338
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 107/223 (47%), Gaps = 12/223 (5%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
+ P G+AV ++ V+DS N +V + +G F+G+ P IAV++ +
Sbjct: 124 LSSPVGVAVDSAKNLYVSDSLNGKVYKYDKNGKFLGEL----KPEKPFSRPAGIAVNSKD 179
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
V D H++ +FD R F F ++ +L +P +AV +++ V ++D
Sbjct: 180 EKYVVDVLAHKLYLFDKEDR-------FKSPF-PRESEDQELSYPSNVAVDSSDNVYITD 231
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
S N ++ F +G + G G G P+G+A+D +G++ V D+ + QIF G
Sbjct: 232 SMNFTIKKFTPDGELKGKIGDIGDAPGSFARPKGIAIDGEGHLYVIDATLDDFQIFNSGG 291
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ L G G+ GEF G+ + +I + D N R+QVF
Sbjct: 292 KLLLHVGKNGARPGEFYLPSGIYIDKKDHIFIADTYNSRVQVF 334
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 14/225 (6%)
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
+ P I ++ + +AD+ V + + VG G L P +AV +
Sbjct: 77 IKLDLPFAIGGDGESVLYIADTGMGIVHRYDLESREVGYLLMAGEDV--LSSPVGVAVDS 134
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ VSDS N +V +D NG+ F+G+ P IAV++ + V
Sbjct: 135 AKNLYVSDSLNGKVYKYDKNGK-------FLGEL----KPEKPFSRPAGIAVNSKDEKYV 183
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
D H++ +FD R + F E SE+ +L +P VAVD + + DS N I+ FTP
Sbjct: 184 VDVLAHKLYLFDKEDRFKSPFPRE-SEDQELSYPSNVAVDSSDNVYITDSMNFTIKKFTP 242
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
DG+ G G G F +G+A+ G++ V D Q+F
Sbjct: 243 DGELKGKIGDIGDAPGSFARPKGIAIDGEGHLYVIDATLDDFQIF 287
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 35 YLQKRRLQFKIG-SRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV 93
YL + +FK R SE ++P +AV +++ + DS N ++ P +LK
Sbjct: 192 YLFDKEDRFKSPFPRESEDQELSYPSNVAVDSSDNVYITDSMNFTIKKFTPDGELKGKIG 251
Query: 94 FL-----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
+ +F P+GIA+ + + V D++ Q+F S G + G G + G+ P
Sbjct: 252 DIGDAPGSFARPKGIAIDGEGHLYVIDATLDDFQIFNSGGKLLLHVGKNGARPGEFYLPS 311
Query: 149 YIAVSNTNRVIVSDSNNHRVQIF 171
I + + + ++D+ N RVQ+F
Sbjct: 312 GIYIDKKDHIFIADTYNSRVQVF 334
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCV 93
L+ KIG G PG F P+GIA+ + + V D++ Q+ H K
Sbjct: 245 ELKGKIGDIGDAPGSFARPKGIAIDGEGHLYVIDATLDDFQIFNSGGKLLLHVG-KNGAR 303
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
F P GI + + I +AD+ N RVQVFQ
Sbjct: 304 PGEFYLPSGIYIDKKDHIFIADTYNSRVQVFQ 335
>gi|260800395|ref|XP_002595119.1| hypothetical protein BRAFLDRAFT_67901 [Branchiostoma floridae]
gi|229280361|gb|EEN51130.1| hypothetical protein BRAFLDRAFT_67901 [Branchiostoma floridae]
Length = 612
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 134/311 (43%), Gaps = 48/311 (15%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--C----FPHFDLKTNCVFL 95
Q + G RGSE G F+WP G+ V D I VAD N R+Q C F
Sbjct: 315 QVRFGGRGSENGQFSWPTGVTVSKDGVIFVADYDNERIQSFHCQGRYLGQFQTLVPGRPS 374
Query: 96 AFTWPRGIAVGPDNSIV-----VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY- 149
P+G+ + ++ V ++ + VQ F G + K L H Y
Sbjct: 375 RMMKPQGVDLDAYGNLWVVGYNVTETCDLLVQ-FSRTGECLNKIP--------LTHTGYF 425
Query: 150 --IAVSN-TNRVIVSDSNNHRVQ------IFDVNGRVFQSDGTFVGKFGSMGNKA----- 195
+AV+ TN+++V+++ F +V + DGT V G K
Sbjct: 426 RGLAVNKRTNQILVTETTATNQPSGGTGVTFRGEIKVLKPDGTLVRVIGGSQQKTWLQPF 485
Query: 196 -------GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFP 248
+++P Y+ V + +IVSD+ +H ++IF G FG +G +GQL++P
Sbjct: 486 WTKSGPHEDIKYPRYVTVDCHDNIIVSDTVDHCIKIFSETGEFQFKFGEDGKGDGQLRYP 545
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
RGV VD G I V D GN R+++F G L G K VA+ + G +++
Sbjct: 546 RGVCVDVSGNIVVADEGNQRVEVFNRHGLLLHHV------TGGMKKPSAVAMATEGRLVM 599
Query: 309 CDRENHRIQVF 319
D + + + V
Sbjct: 600 TDVDTNMVTVL 610
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 39/199 (19%)
Query: 101 RGIAVGP-DNSIVVADSSNH-------------RVQVFQSDGTFVGKFGSMGNKA----- 141
RG+AV N I+V +++ ++V + DGT V G K
Sbjct: 426 RGLAVNKRTNQILVTETTATNQPSGGTGVTFRGEIKVLKPDGTLVRVIGGSQQKTWLQPF 485
Query: 142 -------GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK 194
+++P Y+ V + +IVSD+ +H ++IF G F KFG G
Sbjct: 486 WTKSGPHEDIKYPRYVTVDCHDNIIVSDTVDHCIKIFS-------ETGEFQFKFGEDGKG 538
Query: 195 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
GQL +P + V + ++V+D N RV++F+ +G ++ G +K P VA+
Sbjct: 539 DGQLRYPRGVCVDVSGNIVVADEGNQRVEVFNRHGLLLHHV------TGGMKKPSAVAMA 592
Query: 255 DQGYISVGDSGNNRIQIFT 273
+G + + D N + + T
Sbjct: 593 TEGRLVMTDVDTNMVTVLT 611
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
QFK G G G +PRG+ V +IVVAD N RV+V F L + V
Sbjct: 527 EFQFKFGEDGKGDGQLRYPRGVCVDVSGNIVVADEGNQRVEV-FNRHGLLLHHVTGGMKK 585
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQS 126
P +A+ + +V+ D + V V +
Sbjct: 586 PSAVAMATEGRLVMTDVDTNMVTVLTT 612
>gi|260824631|ref|XP_002607271.1| hypothetical protein BRAFLDRAFT_88219 [Branchiostoma floridae]
gi|229292617|gb|EEN63281.1| hypothetical protein BRAFLDRAFT_88219 [Branchiostoma floridae]
Length = 645
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 114/255 (44%), Gaps = 39/255 (15%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKA--GQLEHPHYIAVSN 154
F +P +AV D IVV DS N R+Q DG+F KF N L + + +
Sbjct: 396 FKFPTSLAVTTDGDIVVTDSDNFRLQFLDKDGSFKKKFAFEFNPCCVAALTNGDLLVTGD 455
Query: 155 TNRVIVSDSNNHRVQIFDVNGR---------------------------VFQSDGTFVGK 187
+++ V D +++ V G V G + K
Sbjct: 456 GHKIHVLDKQGRELRVIQVKGSAEKDKTTQGIAVDGLGRIIITIGYQVFVLSPSGDVILK 515
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG G QL + V+++N++I+SD NH ++IFD GR + + GS GS GQL
Sbjct: 516 FGDKGQGQQQLGSYLRVTVNSSNQIIISDFGNHNLKIFDPTGRHLFTCGSHGSGLGQLCR 575
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL---EGVAVMSNG 304
P V D +G I V D N+R+ +F+ DG F+R E G+ +G+ + +G
Sbjct: 576 PNCVVTDSEGNIIVADFWNHRVSLFSQDGTFIRHV-----LTPEEHGMCYPKGLTLTQDG 630
Query: 305 NILVCDRENHRIQVF 319
++ V D H I++F
Sbjct: 631 HLFVTD--CHSIKIF 643
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 97/222 (43%), Gaps = 33/222 (14%)
Query: 129 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR------------ 176
T + G G++ GQ + P +AV+ ++V+DS+N R+Q D +G
Sbjct: 381 TLLKTVGQKGSRDGQFKFPTSLAVTTDGDIVVTDSDNFRLQFLDKDGSFKKKFAFEFNPC 440
Query: 177 ----------VFQSDGTFVGKFGSMGNK---------AGQLEHPHYIAVSNTNRVIVSDS 217
+ DG + G + A + + IAV R+I+ +
Sbjct: 441 CVAALTNGDLLVTGDGHKIHVLDKQGRELRVIQVKGSAEKDKTTQGIAVDGLGRIII--T 498
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
++V + +G VI FG +G + QL V V+ I + D GN+ ++IF P G+
Sbjct: 499 IGYQVFVLSPSGDVILKFGDKGQGQQQLGSYLRVTVNSSNQIIISDFGNHNLKIFDPTGR 558
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L G GSG G+ V S GNI+V D NHR+ +F
Sbjct: 559 HLFTCGSHGSGLGQLCRPNCVVTDSEGNIIVADFWNHRVSLF 600
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 167 RVQIFDVNGRVFQSDG--TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 224
++ F +N + G T + G G++ GQ + P +AV+ ++V+DS+N R+Q
Sbjct: 363 KMSPFPINVEICTRRGSPTLLKTVGQKGSRDGQFKFPTSLAVTTDGDIVVTDSDNFRLQF 422
Query: 225 FDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGC 284
D +G F E + P VA G + V G ++I + G+ LR
Sbjct: 423 LDKDGSFKKKFAFEFN-------PCCVAALTNGDLLVTGDG-HKIHVLDKQGRELRVIQV 474
Query: 285 WGSGDGEFKGLEGVAVMSNGNILV 308
GS + + K +G+AV G I++
Sbjct: 475 KGSAEKD-KTTQGIAVDGLGRIII 497
>gi|340380228|ref|XP_003388625.1| PREDICTED: hypothetical protein LOC100634990 [Amphimedon
queenslandica]
Length = 616
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 86/158 (54%), Gaps = 17/158 (10%)
Query: 52 PGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC--VFLA----FTWPRGIAV 105
P F+ P GIA+ PDN I+V+D +HR+Q LK + V++A +PR IA+
Sbjct: 267 PLIFSSPHGIAISPDNFILVSD--DHRIQKISIDGYLKASVGQVYIADRDNHRYPRDIAI 324
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV--SNTNRVIVSDS 163
+ VAD NH +Q F DG FV +FG+ G+ GQL+ PH I + + T V VS+
Sbjct: 325 DSQGLVYVADRGNHCIQKFSPDGKFVDQFGTEGSGPGQLKEPHGITIDTAATGLVYVSEG 384
Query: 164 NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP 201
NHR+ VF SDG FV KFGS G+ Q P
Sbjct: 385 GNHRIS-------VFTSDGAFVRKFGSKGSNIEQFNKP 415
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 101/199 (50%), Gaps = 13/199 (6%)
Query: 115 DSSNHRVQVFQSDGTFVGKFGSMGNKAGQ---LEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
D S ++ + +SD T + NK PH IA+S N ++VSD +HR+Q
Sbjct: 238 DDSIIQLILEESDATLWTVLAPIKNKLDIPLIFSSPHGIAISPDNFILVSD--DHRIQKI 295
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
++G + S G + ++ +P IA+ + V V+D NH +Q F +G+
Sbjct: 296 SIDGYLKASVGQVY-----IADRDNH-RYPRDIAIDSQGLVYVADRGNHCIQKFSPDGKF 349
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDD--QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+ FG+EGS GQLK P G+ +D G + V + GN+RI +FT DG F+R FG GS
Sbjct: 350 VDQFGTEGSGPGQLKEPHGITIDTAATGLVYVSEGGNHRISVFTSDGAFVRKFGSKGSNI 409
Query: 290 GEFKGLEGVAVMSNGNILV 308
+F G+ +G L+
Sbjct: 410 EQFNKPTGLRFDKDGLFLL 428
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 179 QSDGTFVGKFGSMGNKAGQ---LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSF 235
+SD T + NK PH IA+S N ++VSD +HR+Q ++G + S
Sbjct: 248 ESDATLWTVLAPIKNKLDIPLIFSSPHGIAISPDNFILVSD--DHRIQKISIDGYLKASV 305
Query: 236 GSEG-SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
G ++ ++PR +A+D QG + V D GN+ IQ F+PDG+F+ FG GSG G+ K
Sbjct: 306 GQVYIADRDNHRYPRDIAIDSQGLVYVADRGNHCIQKFSPDGKFVDQFGTEGSGPGQLKE 365
Query: 295 LEGVAV--MSNGNILVCDRENHRIQVF 319
G+ + + G + V + NHRI VF
Sbjct: 366 PHGITIDTAATGLVYVSEGGNHRISVF 392
>gi|156401591|ref|XP_001639374.1| predicted protein [Nematostella vectensis]
gi|156226502|gb|EDO47311.1| predicted protein [Nematostella vectensis]
Length = 636
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 12/210 (5%)
Query: 110 SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 169
+ V DS+N +V V+ G FG +G + G+ +P I+V NR I++DS N+R+Q
Sbjct: 438 ELAVIDSTNSQVHVYGCFGELARSFGKVGREIGEFYYPSGISVDEKNRFIIADSGNNRIQ 497
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
+ + S G F+ FGS G + +L+ P A+ + IV+D+ N+ +++F +G
Sbjct: 498 VLN-------SVGDFLLVFGSSGPE--KLKSPES-AIFTKDHFIVADTGNNVLKVFSADG 547
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+ EE Q P V D G++ + + G++R+++ +PD + G G
Sbjct: 548 SYKETIKLLNGEEFQ--SPCHVTSDPNGFLVICERGSHRLKVLSPDMNLITVLGMAGRLP 605
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ E V S+G I V D N+RIQVF
Sbjct: 606 GQLFYPECSVVTSDGAIAVADYGNNRIQVF 635
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 119/243 (48%), Gaps = 27/243 (11%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDL---K 89
Y+ ++QF G+ G+ G ++ +G + V DS+N +V V CF K
Sbjct: 415 YMDTHQVQFGFGTHGT--GSYS-----RIG---ELAVIDSTNSQVHVYGCFGELARSFGK 464
Query: 90 TNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
F +P GI+V N ++ADS N+R+QV S G F+ FGS G + +L+ P
Sbjct: 465 VGREIGEFYYPSGISVDEKNRFIIADSGNNRIQVLNSVGDFLLVFGSSGPE--KLKSPES 522
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
A+ + IV+D+ N+ +++F +G ++ G+ + + P ++
Sbjct: 523 -AIFTKDHFIVADTGNNVLKVFSADGSYKETIKLLNGE---------EFQSPCHVTSDPN 572
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
+++ + +HR+++ + +IT G G GQL +P V G I+V D GNNRI
Sbjct: 573 GFLVICERGSHRLKVLSPDMNLITVLGMAGRLPGQLFYPECSVVTSDGAIAVADYGNNRI 632
Query: 270 QIF 272
Q+F
Sbjct: 633 QVF 635
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 205 AVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDS 264
+ S + V DS N +V ++ G + SFG G E G+ +P G++VD++ + DS
Sbjct: 432 SYSRIGELAVIDSTNSQVHVYGCFGELARSFGKVGREIGEFYYPSGISVDEKNRFIIADS 491
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GNNRIQ+ G FL FG SG + K E A+ + + +V D N+ ++VF
Sbjct: 492 GNNRIQVLNSVGDFLLVFG--SSGPEKLKSPES-AIFTKDHFIVADTGNNVLKVF 543
>gi|374994067|ref|YP_004969566.1| gluconolactonase [Desulfosporosinus orientis DSM 765]
gi|357212433|gb|AET67051.1| gluconolactonase [Desulfosporosinus orientis DSM 765]
Length = 1526
Score = 99.4 bits (246), Expect = 2e-18, Method: Composition-based stats.
Identities = 84/266 (31%), Positives = 130/266 (48%), Gaps = 38/266 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK-TNCVFLA--FTWPRGIAVGPDNSI 111
F+ P+G+AV I V D N+ ++ D TN V L F+ P G+AV I
Sbjct: 168 FSNPKGVAVDSSGKIYVVDYGNNAIK----RMDADGTNIVTLGSGFSNPNGVAVDSSGKI 223
Query: 112 VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
VADSSN+ ++ +DGT + G+ P+ +AV ++ ++ V+D+NN+ ++
Sbjct: 224 YVADSSNNAIKRMDADGTNIVTLGT------GFSTPNGVAVDSSGKIYVADTNNNAIKRM 277
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
D +DGT + GS +P+ +AV ++ ++ V+DS + ++ D +G
Sbjct: 278 D-------ADGTNIVTLGS------GFSYPNGVAVDSSGKIYVADSGHGAIKRMDADGTN 324
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
I + G+ S P GVAVD G I V D GN I+ DG + GSG
Sbjct: 325 IVTLGTGFSN------PNGVAVDSSGKIYVSDPGNGAIKRMDADGTNIVTL---GSG--- 372
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQ 317
F EGVAV S+G I V D + I+
Sbjct: 373 FSSPEGVAVDSSGKIYVTDSGHSAIK 398
Score = 94.0 bits (232), Expect = 9e-17, Method: Composition-based stats.
Identities = 82/266 (30%), Positives = 122/266 (45%), Gaps = 38/266 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK-TNCVFLA--FTWPRGIAVGPDNSI 111
F++P G+AV I VADS + ++ D TN V L F+ P G+AV I
Sbjct: 291 FSYPNGVAVDSSGKIYVADSGHGAIK----RMDADGTNIVTLGTGFSNPNGVAVDSSGKI 346
Query: 112 VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
V+D N ++ +DGT + GS P +AV ++ ++ V+DS + ++
Sbjct: 347 YVSDPGNGAIKRMDADGTNIVTLGS------GFSSPEGVAVDSSGKIYVTDSGHSAIKRM 400
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
D +DGT + GS P +AV ++ ++ V D +N+ ++ D +G
Sbjct: 401 D-------ADGTNIVTLGS------GFSRPFGVAVDSSGKIYVGDLDNNAIKRMDADGTN 447
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
I + GS S P GVAVD G I V D GN+ I+ DG + G
Sbjct: 448 IVTLGSGFSS------PAGVAVDSSGKIYVADFGNSAIKRMDADGTNIVTLGT------G 495
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQ 317
F G GVAV S+G I V D N I+
Sbjct: 496 FSGPAGVAVDSSGKIYVADLGNSTIK 521
Score = 89.0 bits (219), Expect = 3e-15, Method: Composition-based stats.
Identities = 82/266 (30%), Positives = 121/266 (45%), Gaps = 38/266 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK-TNCVFLA--FTWPRGIAVGPDNSI 111
F+ P G+AV I V+D N ++ D TN V L F+ P G+AV I
Sbjct: 332 FSNPNGVAVDSSGKIYVSDPGNGAIK----RMDADGTNIVTLGSGFSSPEGVAVDSSGKI 387
Query: 112 VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
V DS + ++ +DGT + GS P +AV ++ ++ V D +N+ ++
Sbjct: 388 YVTDSGHSAIKRMDADGTNIVTLGS------GFSRPFGVAVDSSGKIYVGDLDNNAIKRM 441
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
D +DGT + GS P +AV ++ ++ V+D N ++ D +G
Sbjct: 442 D-------ADGTNIVTLGS------GFSSPAGVAVDSSGKIYVADFGNSAIKRMDADGTN 488
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
I + G+ S P GVAVD G I V D GN+ I+ DG + GSG
Sbjct: 489 IVTLGTGFSG------PAGVAVDSSGKIYVADLGNSTIKRMDADGTNIVTL---GSG--- 536
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQ 317
F +GVAV SNG I V D N I+
Sbjct: 537 FSSPDGVAVDSNGKIYVADFGNSAIK 562
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 77/266 (28%), Positives = 117/266 (43%), Gaps = 38/266 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK-TNCVFLA--FTWPRGIAVGPDNSI 111
F+ P G+AV I V DS + ++ D TN V L F+ P G+AV I
Sbjct: 373 FSSPEGVAVDSSGKIYVTDSGHSAIK----RMDADGTNIVTLGSGFSRPFGVAVDSSGKI 428
Query: 112 VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
V D N+ ++ +DGT + GS P +AV ++ ++ V+D N ++
Sbjct: 429 YVGDLDNNAIKRMDADGTNIVTLGS------GFSSPAGVAVDSSGKIYVADFGNSAIKRM 482
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
D +DGT + G+ P +AV ++ ++ V+D N ++ D +G
Sbjct: 483 D-------ADGTNIVTLGT------GFSGPAGVAVDSSGKIYVADLGNSTIKRMDADGTN 529
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
I + GS S P GVAVD G I V D GN+ I+ DG + G
Sbjct: 530 IVTLGSGFSS------PDGVAVDSNGKIYVADFGNSAIKRMDADGTNIVTLGT------G 577
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQ 317
F GVA S+G I V D N+ ++
Sbjct: 578 FFNPNGVAADSSGKIYVADSANNSVK 603
Score = 81.6 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 66/216 (30%), Positives = 105/216 (48%), Gaps = 31/216 (14%)
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
L F++ G+AV I V D +N+ ++ +DGT + GS +P +AV +
Sbjct: 125 LGFSYFNGVAVDSSGKIYVVDFNNNAIKRMDADGTNIVTLGS------GFSNPKGVAVDS 178
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ ++ V D N+ ++ D +DGT + GS +P+ +AV ++ ++ V
Sbjct: 179 SGKIYVVDYGNNAIKRMD-------ADGTNIVTLGS------GFSNPNGVAVDSSGKIYV 225
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+DS+N+ ++ D +G I + G+ S P GVAVD G I V D+ NN I+
Sbjct: 226 ADSSNNAIKRMDADGTNIVTLGTGFST------PNGVAVDSSGKIYVADTNNNAIKRMDA 279
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
DG + GSG F GVAV S+G I V D
Sbjct: 280 DGTNIVTL---GSG---FSYPNGVAVDSSGKIYVAD 309
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 30/216 (13%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK-TNCVFLA--FTWPRGIAVGPDNSI 111
F+ P G+AV I VAD N ++ D TN V L F+ P G+AV I
Sbjct: 455 FSSPAGVAVDSSGKIYVADFGNSAIK----RMDADGTNIVTLGTGFSGPAGVAVDSSGKI 510
Query: 112 VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
VAD N ++ +DGT + GS P +AV + ++ V+D N ++
Sbjct: 511 YVADLGNSTIKRMDADGTNIVTLGS------GFSSPDGVAVDSNGKIYVADFGNSAIKRM 564
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV-QIFDVNGR 230
D +G + GT G F +P+ +A ++ ++ V+DS N+ V +I + G
Sbjct: 565 DADGTNIVTLGT--GFF-----------NPNGVAADSSGKIYVADSANNSVKKIQTIYG- 610
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
++ GS+ G + V Q VG++GN
Sbjct: 611 --VTYDGNGSDGGSVPTDVTNYVYGQSVTVVGNTGN 644
>gi|373457453|ref|ZP_09549220.1| NHL repeat containing protein [Caldithrix abyssi DSM 13497]
gi|371719117|gb|EHO40888.1| NHL repeat containing protein [Caldithrix abyssi DSM 13497]
Length = 324
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 22/218 (10%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVS 161
I G N I + D +R++++ N + ++HP IA + +V+V
Sbjct: 120 ITDGGLNKIFLYDLKKNRLKIW--------------NDSLDIDHPTGIAYYPHRKQVVVV 165
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
++ HR+ D +G+V + G G G+ P +I + N+ + V+DS N R
Sbjct: 166 ETGKHRLLFLDKSGKVIRV-------LGKRGLGHGEFNFPTFIWIDNSGTIYVNDSMNFR 218
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+QIFD +G T FG G G L P+G+A D +G I V D+ N +Q+F G L
Sbjct: 219 IQIFDFDGTFRTVFGKLGDVSGYLARPKGIATDTKGNIYVVDALFNVVQVFDQQGNLLTY 278
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G G+F G+ + I V D N RIQ F
Sbjct: 279 FGGQGKEAGQFWMPTGIYIDGQDRIFVADSFNSRIQEF 316
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 58 PRGIAVGPD-NSIVVADSSNHRVQVCFPHFDLKTNCVFLA----------FTWPRGIAVG 106
P GIA P +VV ++ HR+ F K+ V F +P I +
Sbjct: 150 PTGIAYYPHRKQVVVVETGKHRLL-----FLDKSGKVIRVLGKRGLGHGEFNFPTFIWID 204
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
+I V DS N R+Q+F DGTF FG +G+ +G L P IA + V D+ +
Sbjct: 205 NSGTIYVNDSMNFRIQIFDFDGTFRTVFGKLGDVSGYLARPKGIATDTKGNIYVVDALFN 264
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
VQ+FD G + FG G +AGQ P I + +R+ V+DS N R+Q F
Sbjct: 265 VVQVFD-------QQGNLLTYFGGQGKEAGQFWMPTGIYIDGQDRIFVADSFNSRIQEFK 317
Query: 227 V 227
+
Sbjct: 318 L 318
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------F 97
+G RG G F +P I + +I V DS N R+Q+ FD VF
Sbjct: 185 LGKRGLGHGEFNFPTFIWIDNSGTIYVNDSMNFRIQIF--DFDGTFRTVFGKLGDVSGYL 242
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P+GIA +I V D+ + VQVF G + FG G +AGQ P I + +R
Sbjct: 243 ARPKGIATDTKGNIYVVDALFNVVQVFDQQGNLLTYFGGQGKEAGQFWMPTGIYIDGQDR 302
Query: 158 VIVSDSNNHRVQIFDV 173
+ V+DS N R+Q F +
Sbjct: 303 IFVADSFNSRIQEFKL 318
>gi|156399835|ref|XP_001638706.1| predicted protein [Nematostella vectensis]
gi|156225829|gb|EDO46643.1| predicted protein [Nematostella vectensis]
Length = 646
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 122/258 (47%), Gaps = 38/258 (14%)
Query: 38 KRRLQFK--IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK-TNCVF 94
+ R Q K + G P F PR +A + + VADS NHR+Q+ FD + +
Sbjct: 411 RERYQLKQVFSAVGGSPEQFQQPRAVAASLNGELAVADSGNHRIQL----FDCQGKQLKY 466
Query: 95 L-----------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
L WP G+ +N+I+++D+ N+R+Q+F V FG +
Sbjct: 467 LRQFGSAGTHKGGMRWPSGVTFDSENNILISDTENNRIQIFSKHKDIVLAFGQT-----E 521
Query: 144 LEHPHYIAVSNTNRVIV-SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
LE+P I V++ + V S N V+I+ DG F+ F + N G+ P
Sbjct: 522 LENPQGICVNDKGHIAVCSGGQNPGVKIYS-------EDGKFLKHFNNPEN--GRF--PA 570
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG-SEGSEEGQLKFPRGVAVDDQGYISV 261
Y+ N+ R VS S+ V++FD NG + G +G G + PRG+A+D ++ V
Sbjct: 571 YLTY-NSGRYFVSYSDGSVVKVFDTNGSFLYCIGMRDGDPHGDYR-PRGLAIDMDNHLLV 628
Query: 262 GDSGNNRIQIFTPDGQFL 279
D IQIFT DG+F+
Sbjct: 629 SDRTGLGIQIFTLDGRFI 646
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 52/229 (22%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
F ++G Q + P +A S + V+DS NHR+Q+FD G+ + ++ +FGS G
Sbjct: 420 FSAVGGSPEQFQQPRAVAASLNGELAVADSGNHRIQLFDCQGKQLK----YLRQFGSAGT 475
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
G + P + + N +++SD+ N+R+QIF + ++ +FG + +L+ P+G+ V
Sbjct: 476 HKGGMRWPSGVTFDSENNILISDTENNRIQIFSKHKDIVLAFG-----QTELENPQGICV 530
Query: 254 DDQGYISVGDSGNNR-IQIFTPDGQFLRAFG----------------------------- 283
+D+G+I+V G N ++I++ DG+FL+ F
Sbjct: 531 NDKGHIAVCSGGQNPGVKIYSEDGKFLKHFNNPENGRFPAYLTYNSGRYFVSYSDGSVVK 590
Query: 284 ----------CWGSGDGEFKG---LEGVAVMSNGNILVCDRENHRIQVF 319
C G DG+ G G+A+ + ++LV DR IQ+F
Sbjct: 591 VFDTNGSFLYCIGMRDGDPHGDYRPRGLAIDMDNHLLVSDRTGLGIQIF 639
>gi|260825327|ref|XP_002607618.1| hypothetical protein BRAFLDRAFT_71500 [Branchiostoma floridae]
gi|229292966|gb|EEN63628.1| hypothetical protein BRAFLDRAFT_71500 [Branchiostoma floridae]
Length = 618
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 126/283 (44%), Gaps = 30/283 (10%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT-----WP 100
G +G G F +P +AV + I V D N+RVQV D + + V +T P
Sbjct: 331 GLKGRGAGQFDFPTDVAV-TNFHIFVLDKGNNRVQV----LDKRGSFVRAFYTGNETSKP 385
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS-MGNKAGQLEHPHYIAVSNTNRVI 159
+GIAV P +VV D + V+VF +G + FG G HP + V
Sbjct: 386 QGIAVNPSGQVVVTDLGDGTVKVFSQEGQLLEYFGEGFAKPCGISIHPW------SGLVA 439
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
++D RV V + DG+ V S G P Y+ N+ V++SD+
Sbjct: 440 IADIQKERVT-------VHRPDGSLVLTLHSKGEGVQSFRKPAYVGTMNSGGVLISDNAT 492
Query: 220 HRVQIFDVNGRVITSFGSEGSE---EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+++F +G+ + + G GQL++PRG+ D+ I V D+ N + +F +G
Sbjct: 493 QSLKLFSKDGKFVRAIGRTAERVDGSGQLRYPRGIIADNADNIIVADADNGTVDVFDCNG 552
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+FL DG K G+A++ + ++V D H + +
Sbjct: 553 KFL--LHTANKADG-LKRPTGLALLGDKRLVVTDTATHSVLIL 592
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 12/242 (4%)
Query: 32 RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN 91
R Q L KR + G+E + P+GIAV P +VV D + V+V F
Sbjct: 362 RVQVLDKRGSFVRAFYTGNET---SKPQGIAVNPSGQVVVTDLGDGTVKV-FSQEGQLLE 417
Query: 92 CVFLAFTWPRGIAVGPDNSIV-VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
F P GI++ P + +V +AD RV V + DG+ V S G P Y+
Sbjct: 418 YFGEGFAKPCGISIHPWSGLVAIADIQKERVTVHRPDGSLVLTLHSKGEGVQSFRKPAYV 477
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
N+ V++SD+ +++F +G+ ++ +G+ + +GQL +P I N +
Sbjct: 478 GTMNSGGVLISDNATQSLKLFSKDGKFVRA----IGRTAERVDGSGQLRYPRGIIADNAD 533
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
+IV+D++N V +FD NG+ + ++ LK P G+A+ + V D+ + +
Sbjct: 534 NIIVADADNGTVDVFDCNGKFLLHTANKAD---GLKRPTGLALLGDKRLVVTDTATHSVL 590
Query: 271 IF 272
I
Sbjct: 591 IL 592
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 19/187 (10%)
Query: 55 FTWPRGIAVGPDNSIV-VADSSNHRVQVCFPHFDLKTNCV-----FLAFTWPRGIAVGPD 108
F P GI++ P + +V +AD RV V P L +F P +
Sbjct: 423 FAKPCGISIHPWSGLVAIADIQKERVTVHRPDGSLVLTLHSKGEGVQSFRKPAYVGTMNS 482
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNK---AGQLEHPHYIAVSNTNRVIVSDSNN 165
++++D++ +++F DG FV G + +GQL +P I N + +IV+D++N
Sbjct: 483 GGVLISDNATQSLKLFSKDGKFVRAIGRTAERVDGSGQLRYPRGIIADNADNIIVADADN 542
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
V +FD NG+ NKA L+ P +A+ R++V+D+ H V I
Sbjct: 543 GTVDVFDCNGKFLLH----------TANKADGLKRPTGLALLGDKRLVVTDTATHSVLIL 592
Query: 226 DVNGRVI 232
++ + I
Sbjct: 593 NMADKDI 599
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
IT G +G GQ FP VAV + +I V D GNNR+Q+ G F+RAF E
Sbjct: 327 ITVGGLKGRGAGQFDFPTDVAVTN-FHIFVLDKGNNRVQVLDKRGSFVRAF----YTGNE 381
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G+AV +G ++V D + ++VF
Sbjct: 382 TSKPQGIAVNPSGQVVVTDLGDGTVKVF 409
>gi|405970482|gb|EKC35381.1| Tripartite motif-containing protein 2 [Crassostrea gigas]
Length = 442
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 116/213 (54%), Gaps = 15/213 (7%)
Query: 69 IVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSS--NHRVQVFQS 126
I+VAD S ++V D + F+ R IAV SI++A S + ++ +
Sbjct: 162 ILVADCSLNKVLAYSKSGDYRGG--FVCDCSIRDIAVTAHGSILLAVSRAGSAIMREYGY 219
Query: 127 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVG 186
+G + +GS + E+P I VS +VI+S ++ + IF + +F
Sbjct: 220 EGNVIASYGSFY----KYENPFGICVSRMGKVIISSLQHNNIHIFTERKK-----PSF-- 268
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
KFGS G+ + P+Y+AV++ + ++VSDS NHR++I +G V+ G +GS+ G+
Sbjct: 269 KFGSRGSGSNHFLLPYYVAVNSRDDIVVSDSGNHRLKIHKNDGTVLHVIGQQGSQSGEFF 328
Query: 247 FPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
+P+GV VD I V D+ N R+Q+F+P+G++L
Sbjct: 329 YPQGVFVDKHDNIYVADANNFRVQVFSPEGEYL 361
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 111 IVVADSSNHRVQVFQSDGTFVGKF---GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 167
I+VAD S ++V + G + G F S+ + A +AVS I+ +
Sbjct: 162 ILVADCSLNKVLAYSKSGDYRGGFVCDCSIRDIAVTAHGSILLAVSRAGSAIMRE----- 216
Query: 168 VQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 227
+ G V S G+F + E+P I VS +VI+S ++ + IF
Sbjct: 217 ---YGYEGNVIASYGSFY-----------KYENPFGICVSRMGKVIISSLQHNNIHIFTE 262
Query: 228 NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGS 287
+ FGS GS P VAV+ + I V DSGN+R++I DG L G GS
Sbjct: 263 RKKPSFKFGSRGSGSNHFLLPYYVAVNSRDDIVVSDSGNHRLKIHKNDGTVLHVIGQQGS 322
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GEF +GV V + NI V D N R+QVF
Sbjct: 323 QSGEFFYPQGVFVDKHDNIYVADANNFRVQVF 354
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 96/183 (52%), Gaps = 8/183 (4%)
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F + P GI V ++++ ++ + +F KFGS G+ + P+Y+AV+
Sbjct: 230 FYKYENPFGICVSRMGKVIISSLQHNNIHIFTERKKPSFKFGSRGSGSNHFLLPYYVAVN 289
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+ + ++VSDS NHR++I ++DGT + G G+++G+ +P + V + +
Sbjct: 290 SRDDIVVSDSGNHRLKIH-------KNDGTVLHVIGQQGSQSGEFFYPQGVFVDKHDNIY 342
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEG-QLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V+D+NN RVQ+F G +++ E G +K + VD++ +++ + + +QI+
Sbjct: 343 VADANNFRVQVFSPEGEYLSTPVENTYEFGVDVKPTNVIVVDNRLVVALRGTRVSLLQIY 402
Query: 273 TPD 275
D
Sbjct: 403 DWD 405
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-----CFPHFDLK 89
+ ++++ FK GSRGS F P +AV + IVV+DS NHR+++ H +
Sbjct: 260 FTERKKPSFKFGSRGSGSNHFLLPYYVAVNSRDDIVVSDSGNHRLKIHKNDGTVLHVIGQ 319
Query: 90 TNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV 131
F +P+G+ V ++I VAD++N RVQVF +G ++
Sbjct: 320 QGSQSGEFFYPQGVFVDKHDNIYVADANNFRVQVFSPEGEYL 361
>gi|291242383|ref|XP_002741087.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 662
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 30/281 (10%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+L+ IG RG+E G F P G+++ I+VA+ N RVQ+ + K+ F ++
Sbjct: 390 KLEKIIGGRGTELGMFDEPIGVSINTSGDILVAEEGNGRVQIIDTYGRPKSQLQFTGYSK 449
Query: 100 PR---GIAVGPDNSIVVAD------SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
P +AV DN+ + D N++V V G F+ G +L+ P I
Sbjct: 450 PVRPIDVAVSVDNTYFITDGPWEGHEGNNQVIVCNQYGNFITCLG-----GRELKCPRGI 504
Query: 151 AVSNTNRVI-VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
A+++ N V+ V D + H ++ +++ G F+ ++ G G + Q HP +I++++
Sbjct: 505 AINHNNGVVYVVDCDAHCIRSYEITG--FR----YIKSVGGKGQGSCQFVHPTFISINSK 558
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
+IVSD NHRVQ +G + F G + +P GV D I V D+GN+R+
Sbjct: 559 GCIIVSD--NHRVQALTSDG--VFMFEIRGCPYEKFIWPMGVTTDKNDNIYVCDNGNDRV 614
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
Q+F +++ C G +A+ +G ++V D
Sbjct: 615 QVFDSRSRYITDIVC-----DAVDGPRCIAISDDGKVVVTD 650
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 28/232 (12%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G+++ I+VA+ N RVQ+ + G + G + P +AVS N
Sbjct: 405 FDEPIGVSINTSGDILVAEEGNGRVQIIDTYGRPKSQLQFTG--YSKPVRPIDVAVSVDN 462
Query: 157 RVIVSDS-------NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
++D NN + V G F+ G +L+ P IA+++
Sbjct: 463 TYFITDGPWEGHEGNNQVI--------VCNQYGNFITCLG-----GRELKCPRGIAINHN 509
Query: 210 NRVI-VSDSNNHRVQIFDVNG-RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
N V+ V D + H ++ +++ G R I S G +G Q P ++++ +G I V D N+
Sbjct: 510 NGVVYVVDCDAHCIRSYEITGFRYIKSVGGKGQGSCQFVHPTFISINSKGCIIVSD--NH 567
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
R+Q T DG F+ F G +F GV N NI VCD N R+QVF
Sbjct: 568 RVQALTSDGVFM--FEIRGCPYEKFIWPMGVTTDKNDNIYVCDNGNDRVQVF 617
>gi|291225322|ref|XP_002732649.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 1079
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 137/287 (47%), Gaps = 27/287 (9%)
Query: 39 RRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF---L 95
R L +G GS G + P GI + V AD SN+RV + + K + F
Sbjct: 460 RGLVQTVGKAGS-AGQLSDPVGITINKHGDFVTADISNNRVTMHDRDGNYKQSFTFTGQF 518
Query: 96 AFTW-PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
A T+ P +A+ DN + D +N +V V G + KF ++ Q++ P IA++
Sbjct: 519 AKTFTPCDVAISDDNEYFMTDVNNKQVVVSDEYGKLIRKF-----RSSQIDEPCGIAINP 573
Query: 155 -TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
T V VS+S+ + R + ++ FG GN G+ P+ +A+++ V
Sbjct: 574 VTKNVYVSESSKDCI-------RKYTQSRVYIKSFGKSGNMQGKFNSPYLLAINSKGMVY 626
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
V D NHR+Q+F+ + + + F S G + ++ P GVAVD Y+ V S N+++
Sbjct: 627 VPDYLNHRIQVFNSDDQFMFEFSSTG--DSTMRCPIGVAVDRNDYVYV--SSNHKVTKHD 682
Query: 274 PDGQFLRAFGCWGSGDGE-FKGLEGVAVMSNGNILVCDRENHRIQVF 319
+GQF+ C D + GVAV ++G I V D N I+VF
Sbjct: 683 SNGQFI----CRIDSDKDGLSWPHGVAVCNDGRIAVVDYNNKCIKVF 725
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 27/273 (9%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF---LAFTW-PRGIAVGPD 108
G ++P GI + V AD SN+RV + + K + F A T+ P +A+ D
Sbjct: 826 GQLSYPWGITINKHGDFVTADISNNRVVIHDRDGNYKQSLTFTGQFAKTFTPWDVAISDD 885
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNHR 167
N + D +N +V V G + KFGS ++++P+ IA++ T V VS+ + H
Sbjct: 886 NEYFMTDVNNKQVVVSDEYGKLIRKFGS-----SEIDNPYGIAINPVTKNVYVSEYSKHC 940
Query: 168 VQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 227
+ R + G ++ FG G + + P+ +A+ + V V D NHR+Q+F+
Sbjct: 941 I-------RKYTQGGVYIKSFGKSGEQV-EFNTPYLLAIKSKGMVYVPDYLNHRIQVFNS 992
Query: 228 NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGS 287
+ + + F S G + + P GVAVD Y+ V S +++ GQF+ C
Sbjct: 993 DDQFMFEFSSTG--DSTMICPIGVAVDKNDYVYV--SSEHKVTQHDSYGQFI----CRID 1044
Query: 288 GDGEFKGLE-GVAVMSNGNILVCDRENHRIQVF 319
D + L GVAV ++G I V D N I+VF
Sbjct: 1045 SDKDGLSLPCGVAVCNDGRIAVVDCGNKCIKVF 1077
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 14/130 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P +A+ + V D NHR+QVF SD F+ +F S G+ + P +AV +
Sbjct: 611 FNSPYLLAINSKGMVYVPDYLNHRIQVFNSDDQFMFEFSSTGDST--MRCPIGVAVDRND 668
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
V V S+NH+V D NG+ F+ + S +K G L PH +AV N R+ V D
Sbjct: 669 YVYV--SSNHKVTKHDSNGQ-------FICRIDS--DKDG-LSWPHGVAVCNDGRIAVVD 716
Query: 217 SNNHRVQIFD 226
NN +++F+
Sbjct: 717 YNNKCIKVFE 726
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 34 QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV 93
+Y Q R G G+ G F P +A+ + V D NHR+QV F+ +
Sbjct: 590 KYTQSRVYIKSFGKSGNMQGKFNSPYLLAINSKGMVYVPDYLNHRIQV----FNSDDQFM 645
Query: 94 FL-------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH 146
F P G+AV ++ + V SSNH+V S+G F+ + S +K G L
Sbjct: 646 FEFSSTGDSTMRCPIGVAVDRNDYVYV--SSNHKVTKHDSNGQFICRIDS--DKDG-LSW 700
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFD 172
PH +AV N R+ V D NN +++F+
Sbjct: 701 PHGVAVCNDGRIAVVDYNNKCIKVFE 726
>gi|260818172|ref|XP_002603958.1| hypothetical protein BRAFLDRAFT_71754 [Branchiostoma floridae]
gi|229289283|gb|EEN59969.1| hypothetical protein BRAFLDRAFT_71754 [Branchiostoma floridae]
Length = 587
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 119/268 (44%), Gaps = 55/268 (20%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS-------MG----------- 138
F P G+ V + I VAD N R+QVF GTFV +F + MG
Sbjct: 327 FRDPFGVTVSDEEDIFVADCGNQRIQVFTLQGTFVRQFPTVVSGGQKMGPADVAMDGVGN 386
Query: 139 ----------------NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF-------DVNG 175
NK G++ + + +R + D+ + + I ++G
Sbjct: 387 LWVVGRTDSADFALQYNKQGRVLRRIDLQKTGKSRGVAVDTRRNHILITHTTRDGTKMHG 446
Query: 176 RV--FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS--NNHRVQIFDVNGRV 231
V F+ DGT V G + ++E PHYI V ++VSD NN V +++ +G+
Sbjct: 447 EVLVFRPDGTLVRTVG----QQQRMEFPHYITVDREGNILVSDCHRNNSCVHVYNKDGQF 502
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ FG EGS EGQL P G+ D G I V D GN R+ +F G+FL+ +
Sbjct: 503 LFKFGGEGSGEGQLNGPSGICTDRAGNIIVADMGNRRVAMFDKTGKFLKHI------TTD 556
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
VA+++ G ++V D E + + +F
Sbjct: 557 MMKPWAVAMVTQGQLVVTDEEKNTVSIF 584
>gi|375107457|ref|ZP_09753718.1| NHL repeat protein [Burkholderiales bacterium JOSHI_001]
gi|374668188|gb|EHR72973.1| NHL repeat protein [Burkholderiales bacterium JOSHI_001]
Length = 368
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 109/229 (47%), Gaps = 16/229 (6%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P GIA GPD + VAD+ RV +G +G G AG L+ P +A
Sbjct: 144 FVAPVGIAAGPDGQVYVADAELGRVFRLGPEGQPLGALG-----AGLLQRPTGLARDPLQ 198
Query: 157 -RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA-----GQLEHPHYIAVSNTN 210
R+ V+D+ H +++FD GR+ + G+ G GN+ G L P ++ S
Sbjct: 199 QRLFVADTRAHDIKVFDDAGRLIDT----WGQKGDNGNEPPGGSHGDLNAPTHLTFSQ-G 253
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
+ V+D+ N R+ FD G FG G G L P+GVA DD+G + V +S ++ +
Sbjct: 254 VLYVADTMNARIVAFDEAGVPQRQFGKRGLYVGNLVRPKGVAADDEGNVYVVESMHDNLL 313
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+F Q L + G GS G+F GV V + V D N R+ VF
Sbjct: 314 VFDNQAQLLLSIGGTGSDVGKFYLPAGVWVDGKNRVFVADMFNGRVVVF 362
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 106/247 (42%), Gaps = 21/247 (8%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPR 101
+ + + S F P GIA GPD + VAD+ RV P P
Sbjct: 131 KLAVWEQASPTQRFVAPVGIAAGPDGQVYVADAELGRVFRLGPEGQPLGALGAGLLQRPT 190
Query: 102 GIAVGP-DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKA--------GQLEHPHYIAV 152
G+A P + VAD+ H ++VF G + +G G+ G L P ++
Sbjct: 191 GLARDPLQQRLFVADTRAHDIKVFDDAGRLIDTWGQKGDNGNEPPGGSHGDLNAPTHLTF 250
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
S + V+D+ N R+ FD G V Q +FG G G L P +A + V
Sbjct: 251 SQ-GVLYVADTMNARIVAFDEAG-VPQR------QFGKRGLYVGNLVRPKGVAADDEGNV 302
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V +S + + +FD +++ S G GS+ G+ P GV VD + + V D N R+ +F
Sbjct: 303 YVVESMHDNLLVFDNQAQLLLSIGGTGSDVGKFYLPAGVWVDGKNRVFVADMFNGRVVVF 362
Query: 273 TPDGQFL 279
QFL
Sbjct: 363 ----QFL 365
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 5/112 (4%)
Query: 69 IVVADSSNHRV----QVCFPHFDLKTNCVFLA-FTWPRGIAVGPDNSIVVADSSNHRVQV 123
+ VAD+ N R+ + P +++ P+G+A + ++ V +S + + V
Sbjct: 255 LYVADTMNARIVAFDEAGVPQRQFGKRGLYVGNLVRPKGVAADDEGNVYVVESMHDNLLV 314
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 175
F + + G G+ G+ P + V NRV V+D N RV +F G
Sbjct: 315 FDNQAQLLLSIGGTGSDVGKFYLPAGVWVDGKNRVFVADMFNGRVVVFQFLG 366
>gi|386875941|ref|ZP_10118090.1| fibronectin type III domain protein, partial [Candidatus
Nitrosopumilus salaria BD31]
gi|386806251|gb|EIJ65721.1| fibronectin type III domain protein, partial [Candidatus
Nitrosopumilus salaria BD31]
Length = 773
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 161/369 (43%), Gaps = 68/369 (18%)
Query: 10 INSCFLLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPD-NS 68
+NS L++ + S + + + FK G+ G+ P + V + +
Sbjct: 1 MNSQTLIKKTIFSLLFVLCIVSLQTVYAEPEFAFKYGTTGTGNSNLNNPTDVIVDKNGKN 60
Query: 69 IVVADSSNHRVQVCFPH--FDLK----------TNCVFLA----------FTWPRGIAVG 106
I V D++N R+ V +D K NC A F P IA
Sbjct: 61 IYVVDNNNDRILVLENDGDYDFKYGTFCDIAEIQNCNDNADGANVDGDGQFNNPISIARD 120
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ-LEHPHYIAV-SNTNRVIVSDSN 164
V DS N RVQ+F DG F KFGS + + L I + ++N ++VS++
Sbjct: 121 ALGKFFVVDSDNFRVQIFDDDGEFQSKFGSSNSAIDEYLGSAKGITIQESSNNILVSNTE 180
Query: 165 NHRVQIFDVNGRVFQSDGTFVGKFGSM-GNKAGQLEHPHYIAVSNTNRVI-VSDSNNHRV 222
+ + +FD S G F+ +F S GN +P + + N+N ++ VSDS N R+
Sbjct: 181 SDLISVFD-------STGDFLFEFDSFDGND--DFSNPSNMIIDNSNEMLFVSDSGNDRI 231
Query: 223 QIFDV-------NGRV--------ITSFGSEGSEEGQLKFPRGVAVDDQG-YISVGDSGN 266
IF++ +G V + FGS G++EG+ P G+A D + V DS N
Sbjct: 232 VIFELVTGTTCPSGTVKSVSGVCYVKEFGSTGADEGEFNDPTGLAYDSTNDLLFVADSDN 291
Query: 267 NRIQIFT-------PDGQ--------FLRAFGCWGSGDGEFKGLEGVAVMSNGNIL-VCD 310
+RIQIF P G ++ G GSG+G+F G+A S ++L V D
Sbjct: 292 DRIQIFKIIDGTTCPSGTEEIVDGVCYVEEIGSTGSGNGQFNTPVGIAYDSTNDLLFVAD 351
Query: 311 RENHRIQVF 319
+N RIQ F
Sbjct: 352 SDNDRIQAF 360
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 26/160 (16%)
Query: 97 FTWPRGIAVGPDNSIV-VADSSNHRVQVFQ-------SDGT--------FVGKFGSMGNK 140
F+ P + + N ++ V+DS N R+ +F+ GT +V +FGS G
Sbjct: 206 FSNPSNMIIDNSNEMLFVSDSGNDRIVIFELVTGTTCPSGTVKSVSGVCYVKEFGSTGAD 265
Query: 141 AGQLEHPHYIAVSNTNRVI-VSDSNNHRVQIFDVNGRVFQSDGT--------FVGKFGSM 191
G+ P +A +TN ++ V+DS+N R+QIF + GT +V + GS
Sbjct: 266 EGEFNDPTGLAYDSTNDLLFVADSDNDRIQIFKIIDGTTCPSGTEEIVDGVCYVEEIGST 325
Query: 192 GNKAGQLEHPHYIAVSNTNRVI-VSDSNNHRVQIFDVNGR 230
G+ GQ P IA +TN ++ V+DS+N R+Q F++N
Sbjct: 326 GSGNGQFNTPVGIAYDSTNDLLFVADSDNDRIQAFELNSE 365
>gi|260824808|ref|XP_002607359.1| hypothetical protein BRAFLDRAFT_69765 [Branchiostoma floridae]
gi|229292706|gb|EEN63369.1| hypothetical protein BRAFLDRAFT_69765 [Branchiostoma floridae]
Length = 632
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 125/274 (45%), Gaps = 58/274 (21%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM------------------- 137
F P G+ V + I VAD N R+QVF GTFV +F ++
Sbjct: 363 FDNPCGVTVSDEGEIFVADWRNERIQVFTLQGTFVRQFPTIVSDEMKMCPDDVAMDVEGN 422
Query: 138 ---------------GNKAGQL----------EHPHYIAVSNTNRVIVSDSNNHRVQIFD 172
NK G++ H + N ++++ + D
Sbjct: 423 LWVVGRLYFNYFSVQYNKQGRVLRKLDLQRTVMHIGVAVDTRRNHILITQTTGDMDNQHD 482
Query: 173 VNGRV--FQSDGTFV-----GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
++G V F+ DGTFV ++ + + G ++ P YI V ++VSD NH V ++
Sbjct: 483 MSGEVLVFRPDGTFVRTVERKRWNFLWTRQG-MKDPRYITVDAEGNILVSDFENHCVYVY 541
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
+ +G+ + FG EGS+EGQL++P G+ D G I V DSGN R+++F G+FL+
Sbjct: 542 NEDGQFLFQFGGEGSDEGQLQWPSGICTDGAGNIIVADSGNRRVEMFDKTGKFLKHI--- 598
Query: 286 GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ D ++ VA+ + G ++V + + + +F
Sbjct: 599 -TTDMQYPC--AVAMATQGQLVVTEVIRNTVSIF 629
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 54/238 (22%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF---------------------- 171
G G++ GQ ++P + VS+ + V+D N R+Q+F
Sbjct: 353 IGREGSRTGQFDNPCGVTVSDEGEIFVADWRNERIQVFTLQGTFVRQFPTIVSDEMKMCP 412
Query: 172 -----DVNGRVFQSDGTFVGKFGSMGNKAGQ----------LEHPHYIAVSNTNRVIVSD 216
DV G ++ + F NK G+ + H + N ++++
Sbjct: 413 DDVAMDVEGNLWVVGRLYFNYFSVQYNKQGRVLRKLDLQRTVMHIGVAVDTRRNHILITQ 472
Query: 217 SNNHRVQIFDVNGRVITSFGSEG---------------SEEGQLKFPRGVAVDDQGYISV 261
+ D++G V+ F +G + +G +K PR + VD +G I V
Sbjct: 473 TTGDMDNQHDMSGEVLV-FRPDGTFVRTVERKRWNFLWTRQG-MKDPRYITVDAEGNILV 530
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D N+ + ++ DGQFL FG GS +G+ + G+ GNI+V D N R+++F
Sbjct: 531 SDFENHCVYVYNEDGQFLFQFGGEGSDEGQLQWPSGICTDGAGNIIVADSGNRRVEMF 588
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+ G EGS GQ P GV V D+G I V D N RIQ+FT G F+R F S + +
Sbjct: 352 TIGREGSRTGQFDNPCGVTVSDEGEIFVADWRNERIQVFTLQGTFVRQFPTIVSDEMKM- 410
Query: 294 GLEGVAVMSNGNILVCDR 311
+ VA+ GN+ V R
Sbjct: 411 CPDDVAMDVEGNLWVVGR 428
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 19/123 (15%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------AFTWPRGIAVGPD 108
PR I V + +I+V+D NH V V ++ +F WP GI
Sbjct: 517 PRYITVDAEGNILVSDFENHCVYV----YNEDGQFLFQFGGEGSDEGQLQWPSGICTDGA 572
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
+I+VADS N RV++F G F+ + +++P +A++ +++V++ + V
Sbjct: 573 GNIIVADSGNRRVEMFDKTGKFLKHITT------DMQYPCAVAMATQGQLVVTEVIRNTV 626
Query: 169 QIF 171
IF
Sbjct: 627 SIF 629
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
F+ G GS+ G WP GI +I+VADS N RV++ FD KT T
Sbjct: 549 FQFGGEGSDEGQLQWPSGICTDGAGNIIVADSGNRRVEM----FD-KTGKFLKHITTDMQ 603
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVF 124
+P +A+ +VV + + V +F
Sbjct: 604 YPCAVAMATQGQLVVTEVIRNTVSIF 629
>gi|340384783|ref|XP_003390890.1| PREDICTED: tripartite motif-containing protein 2-like [Amphimedon
queenslandica]
Length = 803
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 140/349 (40%), Gaps = 102/349 (29%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC----------FPHFDLKTNCV 93
+IGS+G+ G F WPR + + D + V+D + HRVQ F F L
Sbjct: 376 RIGSKGNGNGQFEWPRSLLLVRDR-LYVSDDNLHRVQYFSATTGQYIGQFGGFGLGNG-- 432
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F RG++ +I+VAD SN RVQVF+ DGTFV GN + +AV
Sbjct: 433 --QFCGLRGMSTDGKGNILVADHSNKRVQVFKEDGTFVQVIQCDGNASD-------VAVD 483
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
N ++ V+ + + VQ+F +G+ + N AG HP+ IA+ N
Sbjct: 484 NEGKIHVTIWSQYHVQVFSPDGKT---------HLDTYNNPAGCFNHPNGIAIDNEGYTF 534
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR----- 268
VS SNN + + + + + +L FP G A+D GYI V +S +
Sbjct: 535 VS-SNNGYLNVLSPDRKQVKLI-------SRLSFPWGGALDKDGYIYVAESDYTKLTNQR 586
Query: 269 ---------------------------IQIFTPD-------------------------- 275
+Q+F+ D
Sbjct: 587 SFNVGNGTTGVAVHTNGEVFASSYDGFVQVFSEDGTAVRRIGSKGNGNGQFNFPWGLLLY 646
Query: 276 -----GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GQ++ G G+G+G+F G++ GNILV D N R+QVF
Sbjct: 647 FSATTGQYIGQLGSNGNGNGQFSSPHGMSTDGKGNILVADYSNKRVQVF 695
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 110/224 (49%), Gaps = 24/224 (10%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
G+AV N V A S++ VQVF DGT V + GS GN GQ E P + + +R+ VS
Sbjct: 346 GVAVHT-NGEVFASSTDGFVQVFSEDGTAVRRIGSKGNGNGQFEWPRSLLLVR-DRLYVS 403
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
D N HRVQ F + G ++G+FG G GQ ++ ++V+D +N R
Sbjct: 404 DDNLHRVQYFSA------TTGQYIGQFGGFGLGNGQFCGLRGMSTDGKGNILVADHSNKR 457
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ---- 277
VQ+F +G + +G+ VAVD++G I V +Q+F+PDG+
Sbjct: 458 VQVFKEDGTFVQVIQCDGN-------ASDVAVDNEGKIHVTIWSQYHVQVFSPDGKTHLD 510
Query: 278 -FLRAFGCWGSGDGEFKGLEGVAVMS--NG--NILVCDRENHRI 316
+ GC+ +G EG +S NG N+L DR+ ++
Sbjct: 511 TYNNPAGCFNHPNGIAIDNEGYTFVSSNNGYLNVLSPDRKQVKL 554
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 74/145 (51%), Gaps = 9/145 (6%)
Query: 176 RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD-VNGRVITS 234
+VF DGT V + GS GN GQ E P + + +R+ VSD N HRVQ F G+ I
Sbjct: 365 QVFSEDGTAVRRIGSKGNGNGQFEWPRSLLLVR-DRLYVSDDNLHRVQYFSATTGQYIGQ 423
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
FG G GQ RG++ D +G I V D N R+Q+F DG F++ C G+
Sbjct: 424 FGGFGLGNGQFCGLRGMSTDGKGNILVADHSNKRVQVFKEDGTFVQVIQCDGNA------ 477
Query: 295 LEGVAVMSNGNILVCDRENHRIQVF 319
VAV + G I V + +QVF
Sbjct: 478 -SDVAVDNEGKIHVTIWSQYHVQVF 501
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 107/267 (40%), Gaps = 48/267 (17%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIV 112
GCF P GIA+ + V+ S+N + V P D K + ++P G A+ D I
Sbjct: 517 GCFNHPNGIAIDNEGYTFVS-SNNGYLNVLSP--DRKQVKLISRLSFPWGGALDKDGYIY 573
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 172
VA+S ++ +S G G +AV V S +D
Sbjct: 574 VAESDYTKLTNQRSFNVGNGTTG--------------VAVHTNGEVFASS--------YD 611
Query: 173 VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
+VF DGT V + GS GN GQ P + + G+ I
Sbjct: 612 GFVQVFSEDGTAVRRIGSKGNGNGQFNFPWGLLL----------------YFSATTGQYI 655
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
GS G+ GQ P G++ D +G I V D N R+Q+F DG F++ C G
Sbjct: 656 GQLGSNGNGNGQFSSPHGMSTDGKGNILVADYSNKRVQVFKEDGTFVQVIQCDGQA---- 711
Query: 293 KGLEGVAVMSNGNILVCDRENHRIQVF 319
VAV + G I V R H +QVF
Sbjct: 712 ---TDVAVDNEGKIHVTIRNQHHVQVF 735
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRG- 102
++GS G+ G F+ P G++ +I+VAD SN RVQV K + F+ G
Sbjct: 657 QLGSNGNGNGQFSSPHGMSTDGKGNILVADYSNKRVQV------FKEDGTFVQVIQCDGQ 710
Query: 103 ---IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM 137
+AV + I V + H VQVF DG + G +
Sbjct: 711 ATDVAVDNEGKIHVTIRNQHHVQVFSPDGIAIDDEGYI 748
>gi|260793567|ref|XP_002591783.1| hypothetical protein BRAFLDRAFT_123530 [Branchiostoma floridae]
gi|229276993|gb|EEN47794.1| hypothetical protein BRAFLDRAFT_123530 [Branchiostoma floridae]
Length = 299
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 85/149 (57%), Gaps = 14/149 (9%)
Query: 128 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK 187
G V KFG G + GQ +HP +AVS+ +IV+D+ NHR+Q+FD S G F+
Sbjct: 49 GELVVKFGGWGPQQGQFKHPGGVAVSSAGHIIVADTGNHRIQVFD-------SRGVFLRA 101
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG G+ HPH +A++ +R++V+D N V++F + G++I G+ G LK
Sbjct: 102 FGFYGSADDAFSHPHDVAMTTDDRILVTDKGNKLVKLFTLEGKLIGKIGT-----GNLKE 156
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
P GVAV G ++V D+ + ++ FT G
Sbjct: 157 PTGVAVYKHGGVAVTDTRD--VKTFTRTG 183
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 182 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSE 241
G V KFG G + GQ +HP +AVS+ +IV+D+ NHR+Q+FD G + +FG GS
Sbjct: 49 GELVVKFGGWGPQQGQFKHPGGVAVSSAGHIIVADTGNHRIQVFDSRGVFLRAFGFYGSA 108
Query: 242 EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVM 301
+ P VA+ I V D GN +++FT +G+ + G G K GVAV
Sbjct: 109 DDAFSHPHDVAMTTDDRILVTDKGNKLVKLFTLEGKLIGKIGT-----GNLKEPTGVAVY 163
Query: 302 SNGNILVCDREN 313
+G + V D +
Sbjct: 164 KHGGVAVTDTRD 175
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 117/267 (43%), Gaps = 55/267 (20%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---- 95
L K G G + G F P G+AV I+VAD+ NHR+QV FD + VFL
Sbjct: 50 ELVVKFGGWGPQQGQFKHPGGVAVSSAGHIIVADTGNHRIQV----FD--SRGVFLRAFG 103
Query: 96 -------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
AF+ P +A+ D+ I+V D N V++F +G +GK G+ G L+ P
Sbjct: 104 FYGSADDAFSHPHDVAMTTDDRILVTDKGNKLVKLFTLEGKLIGKIGT-----GNLKEPT 158
Query: 149 YIAVSNTNRVIVSDSNNHRVQIF-----------------------DVNGRVFQSDGTFV 185
+AV V V+D+ + V+ F D GR F
Sbjct: 159 GVAVYKHGGVAVTDTRD--VKTFTRTGVMSATCTSDDPGYSHYLCTDDEGRWSAGWQEFR 216
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL 245
G K +L P I + +IV+D + + V++ DV G + + L
Sbjct: 217 GDGWVFRQK--RLAGPGGICLDKARNIIVADYHGNSVEVLDVAGVYKATVAN------GL 268
Query: 246 KFPRGVAVDDQGYISVGDSGNNRIQIF 272
P GVA+ QG++ V DSGNN I+++
Sbjct: 269 NHPEGVALTPQGHVVVVDSGNNCIRVY 295
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 6/127 (4%)
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
N++G ++ Y + ++ V + ++ V G ++ FG G ++GQ K P GVA
Sbjct: 19 NRSGLIKFRPYGGIGELVKLGVGELDSRTV------GELVVKFGGWGPQQGQFKHPGGVA 72
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRE 312
V G+I V D+GN+RIQ+F G FLRAFG +GS D F VA+ ++ ILV D+
Sbjct: 73 VSSAGHIIVADTGNHRIQVFDSRGVFLRAFGFYGSADDAFSHPHDVAMTTDDRILVTDKG 132
Query: 313 NHRIQVF 319
N +++F
Sbjct: 133 NKLVKLF 139
>gi|451946198|ref|YP_007466793.1| NHL repeat protein [Desulfocapsa sulfexigens DSM 10523]
gi|451905546|gb|AGF77140.1| NHL repeat protein [Desulfocapsa sulfexigens DSM 10523]
Length = 282
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 8/224 (3%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P +AV + +I V D N +++ F G + G G G+ P I + +
Sbjct: 12 FNQPSDVAVARNGTIYVVDGVNGKIKAFSPSGKPLFTIGRPGTDPGEFAFPLGIGLDESG 71
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
RV V+DS N R+QIF + G F+ + + + +A S+ V+D
Sbjct: 72 RVYVADSRNSRIQIF-------SATGDFISEIPVPALNGEKSDPTDVVADSSGKWCFVAD 124
Query: 217 SNNHRVQIFDV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
+NNHR+ FD+ ++I S+G G+E+ + ++P + + + + D N R+Q+ +
Sbjct: 125 NNNHRILQFDIATKKLINSYGKPGAEKWEFRYPFLMHLHRDKDLYIVDVINTRVQVLNTE 184
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F+ G WG G F +G+ V NG V D +Q+F
Sbjct: 185 GKFVTFVGGWGVEKGHFFRPKGITVDKNGLSYVSDSYMGVVQLF 228
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 12/271 (4%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPH----FDL-KTNCVFLAFTWPRGIAVGPDN 109
F P +AV + +I V D N +++ P F + + F +P GI +
Sbjct: 12 FNQPSDVAVARNGTIYVVDGVNGKIKAFSPSGKPLFTIGRPGTDPGEFAFPLGIGLDESG 71
Query: 110 SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 169
+ VADS N R+Q+F + G F+ + + + +A S+ V+D+NNHR+
Sbjct: 72 RVYVADSRNSRIQIFSATGDFISEIPVPALNGEKSDPTDVVADSSGKWCFVADNNNHRIL 131
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
FD+ + + +G G + + +P + + + + D N RVQ+ + G
Sbjct: 132 QFDIATK------KLINSYGKPGAEKWEFRYPFLMHLHRDKDLYIVDVINTRVQVLNTEG 185
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+ +T G G E+G P+G+ VD G V DS +Q+F G F G +G
Sbjct: 186 KFVTFVGGWGVEKGHFFRPKGITVDKNGLSYVSDSYMGVVQLFNITGTFHSVLGDPTTGK 245
Query: 290 -GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+F G+ + ++ V + RI VF
Sbjct: 246 VKKFVTPVGLFIDDAMHLYVVEMLPGRISVF 276
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%)
Query: 197 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ 256
+ P +AV+ + V D N +++ F +G+ + + G G++ G+ FP G+ +D+
Sbjct: 11 EFNQPSDVAVARNGTIYVVDGVNGKIKAFSPSGKPLFTIGRPGTDPGEFAFPLGIGLDES 70
Query: 257 GYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
G + V DS N+RIQIF+ G F+ + + VA S V D NHRI
Sbjct: 71 GRVYVADSRNSRIQIFSATGDFISEIPVPALNGEKSDPTDVVADSSGKWCFVADNNNHRI 130
Query: 317 QVF 319
F
Sbjct: 131 LQF 133
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%)
Query: 242 EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVM 301
E + P VAV G I V D N +I+ F+P G+ L G G+ GEF G+ +
Sbjct: 9 EEEFNQPSDVAVARNGTIYVVDGVNGKIKAFSPSGKPLFTIGRPGTDPGEFAFPLGIGLD 68
Query: 302 SNGNILVCDRENHRIQVF 319
+G + V D N RIQ+F
Sbjct: 69 ESGRVYVADSRNSRIQIF 86
>gi|357618598|gb|EHJ71523.1| hypothetical protein KGM_12689 [Danaus plexippus]
Length = 248
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 76/124 (61%), Gaps = 2/124 (1%)
Query: 197 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR-VITSFGSEGSEEGQLKFPRGVAVDD 255
+ P +AV+ +RVIV DS N RV+I++ + IT FGS G +GQ + P + VD
Sbjct: 126 EFNAPTAVAVTK-DRVIVLDSGNRRVKIYNKQDKNKITEFGSLGHRKGQFRQPEVLTVDP 184
Query: 256 QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHR 315
G+I VGDSGN R+QIF P+GQ +R FG G+ G+F + G+ V +I+V D +NH
Sbjct: 185 LGFILVGDSGNCRVQIFKPNGQLVRVFGGLGADPGKFGWISGIYVTKQLDIIVSDTKNHN 244
Query: 316 IQVF 319
+ F
Sbjct: 245 VNFF 248
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
+ P +AV+ +RVIV DS N RV+I++ + D + +FGS+G++ GQ P
Sbjct: 126 EFNAPTAVAVTK-DRVIVLDSGNRRVKIYN------KQDKNKITEFGSLGHRKGQFRQPE 178
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
+ V ++V DS N RVQIF NG+++ FG G++ G+ + G+ V Q I V
Sbjct: 179 VLTVDPLGFILVGDSGNCRVQIFKPNGQLVRVFGGLGADPGKFGWISGIYVTKQLDIIVS 238
Query: 263 DSGNNRIQIF 272
D+ N+ + F
Sbjct: 239 DTKNHNVNFF 248
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVF-QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P +AV D ++V DS N RV+++ + D + +FGS+G++ GQ P + V
Sbjct: 127 FNAPTAVAVTKDR-VIVLDSGNRRVKIYNKQDKNKITEFGSLGHRKGQFRQPEVLTVDPL 185
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
++V DS N RVQIF NG++ V FG +G G+ I V+ +IVS
Sbjct: 186 GFILVGDSGNCRVQIFKPNGQL-------VRVFGGLGADPGKFGWISGIYVTKQLDIIVS 238
Query: 216 DSNNHRVQIF 225
D+ NH V F
Sbjct: 239 DTKNHNVNFF 248
>gi|260827663|ref|XP_002608784.1| hypothetical protein BRAFLDRAFT_110072 [Branchiostoma floridae]
gi|229294136|gb|EEN64794.1| hypothetical protein BRAFLDRAFT_110072 [Branchiostoma floridae]
Length = 618
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 105/228 (46%), Gaps = 49/228 (21%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT- 155
F P G+ V + I VAD N R+QVF GTFV +F ++ + AGQ +P+ +A+
Sbjct: 353 FKEPCGVTVSDEGDIFVADRLNQRIQVFTLQGTFVRQFPTIMS-AGQKMYPNDVAMDGVG 411
Query: 156 ----------------------------------NRVIVSDSNNHRVQIFDVNGRV---- 177
+R + D+ + + I G V
Sbjct: 412 NLWVVGGKGSAYFAMKYNKQGRVLRKFDLQKTGWDRGVAVDTRRNHILITQTTGDVDNPH 471
Query: 178 -----FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
F+ DGT VG ++G + G +E P YI V ++VSD NH V ++ +G+ +
Sbjct: 472 GEVLVFRPDGTLVG---AVGQQQG-MECPQYITVDGEGNILVSDYGNHCVYAYNEDGQFL 527
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
FG EG EGQL P G+ D G I V D GN+R+++F G+FL+
Sbjct: 528 FQFGGEGRGEGQLWQPHGICTDRAGNIIVADWGNSRVEMFDKTGKFLK 575
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+ I V + +I+V+D NH V + DG F+ +FG G GQL PH I +I
Sbjct: 496 PQYITVDGEGNILVSDYGNHCVYAYNEDGQFLFQFGGEGRGEGQLWQPHGICTDRAGNII 555
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D N RV++FD G+ + N + +P +A+ T R +V +NN
Sbjct: 556 VADWGNSRVEMFDKTGKFLK-------------NVTTDILYPRAVAME-TQRQLVVTNNN 601
Query: 220 HRVQIF 225
H+V I
Sbjct: 602 HKVSIL 607
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
+ K P GV V D+G I V D N RIQ+FT G F+R F
Sbjct: 352 KFKEPCGVTVSDEGDIFVADRLNQRIQVFTLQGTFVRQF 390
>gi|291232806|ref|XP_002736345.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 607
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 28/280 (10%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+L+ IG G E F+ P G+ + IVVAD N VQ+ K+ F ++
Sbjct: 338 KLERTIG--GDESRMFSVPLGVGINICGDIVVADEGNETVQIVDKFGRPKSQLQFTGYSK 395
Query: 100 ---PRGIAVGPDNSIVVAD-----SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
P +A+ DN+ + D S+ ++V V G + FG A +L++P+ IA
Sbjct: 396 TVSPIDVAISLDNAYFITDGSWVPSAENQVIVCNQYGKVIKCFG-----AKELKYPYGIA 450
Query: 152 VSNTNRVI-VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
+++ N ++ V D++ H ++++++ + ++ GS G + E P +IA+++
Sbjct: 451 INHNNGIVYVVDNDAHCIRLYEM------ASFKYIKSVGSKGQGSCNFESPKFIAINSNG 504
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
+IVSD+ N R+Q+ +G + F G E FP GVA D I V D +NR+Q
Sbjct: 505 CLIVSDTGNDRIQVLSSDGECMFVF--HGCENDYFSFPCGVATDKNDNIYVCDYEHNRVQ 562
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
F G F+ + GVAV +G I+V D
Sbjct: 563 KFNSKGAFITN----SVSGSDVHNPIGVAVTDDGKIIVTD 598
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 120/238 (50%), Gaps = 39/238 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY------- 149
F+ P G+ + IVVAD N VQ+ V KFG QL+ Y
Sbjct: 351 FSVPLGVGINICGDIVVADEGNETVQI-------VDKFG---RPKSQLQFTGYSKTVSPI 400
Query: 150 -IAVSNTNRVIVSD-----SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
+A+S N ++D S ++V + + G+V + FG A +L++P+
Sbjct: 401 DVAISLDNAYFITDGSWVPSAENQVIVCNQYGKVIKC-------FG-----AKELKYPYG 448
Query: 204 IAVSNTNRVI-VSDSNNHRVQIFDVNG-RVITSFGSEGSEEGQLKFPRGVAVDDQGYISV 261
IA+++ N ++ V D++ H ++++++ + I S GS+G + P+ +A++ G + V
Sbjct: 449 IAINHNNGIVYVVDNDAHCIRLYEMASFKYIKSVGSKGQGSCNFESPKFIAINSNGCLIV 508
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D+GN+RIQ+ + DG+ + F G + F GVA N NI VCD E++R+Q F
Sbjct: 509 SDTGNDRIQVLSSDGECMFVF--HGCENDYFSFPCGVATDKNDNIYVCDYEHNRVQKF 564
>gi|196233139|ref|ZP_03131986.1| ABC transporter-related protein [Chthoniobacter flavus Ellin428]
gi|196222783|gb|EDY17306.1| ABC transporter-related protein [Chthoniobacter flavus Ellin428]
Length = 598
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 12/262 (4%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT--WPRGIAVGPDNSIVVAD 115
PR +A G + I D++ RV + LK L P GI V D +VV D
Sbjct: 341 PRSLATGLGDDIASLDTAG-RVLIYGADGRLKRQWHMLDVKVGKPEGIVVLRDGRVVVCD 399
Query: 116 SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD-SNNHRVQIFDVN 174
+ HRV F +DG ++ G G + +P I + V + N R+Q
Sbjct: 400 THYHRVVWFDADGNWLKNIGQQGKGNSEFIYPVGICKDPEENLYVCEYGGNDRIQ----- 454
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
F +G +V FGS G GQ + P + ++ ++D+ N+RV I+ G+ +
Sbjct: 455 --KFTREGQWVTSFGSFGTGPGQFQRPSGLTWL-AGKIYITDAVNNRVLIYSDGGQYVGV 511
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
G+ G P +A G + + + G R+ +PDG+ L +G G G+GEF
Sbjct: 512 LGAPGQPPLDFDLPYDIAAGGDGELYIIEYGGGRLTKVSPDGRLLGRYGHTGGGEGEFST 571
Query: 295 LEGVAVMSNGNILVCDRENHRI 316
G+ + S+ + + D +N RI
Sbjct: 572 PWGLTIDSHMRLRIADTKNRRI 593
>gi|260792766|ref|XP_002591385.1| hypothetical protein BRAFLDRAFT_86892 [Branchiostoma floridae]
gi|229276590|gb|EEN47396.1| hypothetical protein BRAFLDRAFT_86892 [Branchiostoma floridae]
Length = 639
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 119/233 (51%), Gaps = 19/233 (8%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT-NRV 158
P G+AV + I VAD+ N R+QVF GTFV +F ++ + ++ HPH +A+ N
Sbjct: 353 PFGVAVSDEGEIFVADNLNQRIQVFTLQGTFVRQFPTVVSGEERM-HPHDVALDGEGNLW 411
Query: 159 IVSD-----SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+V + ++ F V+ + + G + KF AG L + NR++
Sbjct: 412 VVGEQWVVGTDLEFEPEFAVHVQ-YNKQGRVLRKFKLQKAAAGWLRARGVAVDTWWNRIL 470
Query: 214 VS------DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
++ D+ + V +F +G ++ + G + +K+P V VD +G I V D N+
Sbjct: 471 ITQITEDQDNKHGEVLVFRPDGTLVRTVGQQQG----MKYPWYVTVDGEGNILVSDRENH 526
Query: 268 RIQI-FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ I + +GQFL FG WGSG+G+ K G+ GNI+V D NHR+++F
Sbjct: 527 CVYIVYNENGQFLFQFGGWGSGEGQLKLPHGICTDRAGNIIVADYGNHRVEMF 579
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 120/275 (43%), Gaps = 44/275 (16%)
Query: 34 QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------------ 81
Q +Q G GS G P G+AV + I VAD+ N R+QV
Sbjct: 329 QTVQPLPKTITFGGEGSGTGQLRLPFGVAVSDEGEIFVADNLNQRIQVFTLQGTFVRQFP 388
Query: 82 --------CFPH---FDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTF 130
PH D + N + W G + + V VQ + G
Sbjct: 389 TVVSGEERMHPHDVALDGEGNLWVVGEQWVVGTDLEFEPEFAV------HVQ-YNKQGRV 441
Query: 131 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS----DSNNHRVQIFDVNGRVFQSDGTFVG 186
+ KF AG L + NR++++ D +N ++ VF+ DGT V
Sbjct: 442 LRKFKLQKAAAGWLRARGVAVDTWWNRILITQITEDQDNKHGEVL-----VFRPDGTLVR 496
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI-FDVNGRVITSFGSEGSEEGQL 245
++G + G +++P Y+ V ++VSD NH V I ++ NG+ + FG GS EGQL
Sbjct: 497 ---TVGQQQG-MKYPWYVTVDGEGNILVSDRENHCVYIVYNENGQFLFQFGGWGSGEGQL 552
Query: 246 KFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
K P G+ D G I V D GN+R+++F G+FL+
Sbjct: 553 KLPHGICTDRAGNIIVADYGNHRVEMFDKTGRFLK 587
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 29/196 (14%)
Query: 96 AFTWPRGIAVGPD---NSIVVA------DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH 146
A W R V D N I++ D+ + V VF+ DGT V ++G + G +++
Sbjct: 451 AAGWLRARGVAVDTWWNRILITQITEDQDNKHGEVLVFRPDGTLVR---TVGQQQG-MKY 506
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
P Y+ V ++VSD NH V I V+ +G F+ +FG G+ GQL+ PH I
Sbjct: 507 PWYVTVDGEGNILVSDRENHCVYI------VYNENGQFLFQFGGWGSGEGQLKLPHGICT 560
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF----------PRGVAVDDQ 256
+IV+D NHRV++FD GR + +E +K P GVA+ Q
Sbjct: 561 DRAGNIIVADYGNHRVEMFDKTGRFLKHITTETILLHTVKVVLMLDLKPLGPWGVAIGPQ 620
Query: 257 GYISVGDSGNNRIQIF 272
G + V D + + I
Sbjct: 621 GQLVVTDVSEDTVHII 636
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+FG EGS GQL+ P GVAV D+G I V D+ N RIQ+FT G F+R F SG+ E
Sbjct: 339 TFGGEGSGTGQLRLPFGVAVSDEGEIFVADNLNQRIQVFTLQGTFVRQFPTVVSGE-ERM 397
Query: 294 GLEGVAVMSNGNILV 308
VA+ GN+ V
Sbjct: 398 HPHDVALDGEGNLWV 412
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 42/103 (40%), Gaps = 23/103 (22%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD--------------- 87
F+ G GS G P GI +I+VAD NHRV++ FD
Sbjct: 540 FQFGGWGSGEGQLKLPHGICTDRAGNIIVADYGNHRVEM----FDKTGRFLKHITTETIL 595
Query: 88 LKTNCVFLAFTW----PRGIAVGPDNSIVVADSSNHRVQVFQS 126
L T V L P G+A+GP +VV D S V + S
Sbjct: 596 LHTVKVVLMLDLKPLGPWGVAIGPQGQLVVTDVSEDTVHIIPS 638
>gi|340373209|ref|XP_003385134.1| PREDICTED: tripartite motif-containing protein 2-like [Amphimedon
queenslandica]
Length = 661
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 93/174 (53%), Gaps = 15/174 (8%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
G+A+ N V A S++ VQVF DGT V + GS G+ GQ + PH + + +R+ VS
Sbjct: 487 GVAIHT-NGEVFASSNDGFVQVFSKDGTPVRRIGSKGDDNGQFKSPHGLLLVG-DRLYVS 544
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
D N HRVQ F + G ++G+FGS GN GQL +P ++ + VS+ N R
Sbjct: 545 DHNLHRVQYFSA------TTGQYIGQFGSKGNGNGQLWYPKGMSTDGKGNIFVSEYRNKR 598
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
VQ+F +G + G+ VAVD++G I V NN +Q+F+PD
Sbjct: 599 VQVFKEDGAFVQVIQCNGN-------VTDVAVDNEGKIYVATFKNNSVQVFSPD 645
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 98/175 (56%), Gaps = 17/175 (9%)
Query: 146 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
H + +A+ +TN + + SN+ VQ VF DGT V + GS G+ GQ + PH +
Sbjct: 484 HTYGVAI-HTNGEVFASSNDGFVQ-------VFSKDGTPVRRIGSKGDDNGQFKSPHGLL 535
Query: 206 VSNTNRVIVSDSNNHRVQIFD-VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDS 264
+ +R+ VSD N HRVQ F G+ I FGS+G+ GQL +P+G++ D +G I V +
Sbjct: 536 LVG-DRLYVSDHNLHRVQYFSATTGQYIGQFGSKGNGNGQLWYPKGMSTDGKGNIFVSEY 594
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
N R+Q+F DG F++ C G+ + VAV + G I V +N+ +QVF
Sbjct: 595 RNKRVQVFKEDGAFVQVIQCNGN-------VTDVAVDNEGKIYVATFKNNSVQVF 642
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 16/130 (12%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQ-SDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P G+ + D + V+D + HRVQ F + G ++G+FGS GN GQL +P ++
Sbjct: 528 FKSPHGLLLVGDR-LYVSDHNLHRVQYFSATTGQYIGQFGSKGNGNGQLWYPKGMSTDGK 586
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+ VS+ N RVQ VF+ DG FV GN +AV N ++ V+
Sbjct: 587 GNIFVSEYRNKRVQ-------VFKEDGAFVQVIQCNGNVTD-------VAVDNEGKIYVA 632
Query: 216 DSNNHRVQIF 225
N+ VQ+F
Sbjct: 633 TFKNNSVQVF 642
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 22/138 (15%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF------ 97
+IGS+G + G F P G+ + D + V+D + HRVQ +F T F
Sbjct: 517 RIGSKGDDNGQFKSPHGLLLVGDR-LYVSDHNLHRVQ----YFSATTGQYIGQFGSKGNG 571
Query: 98 ----TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
+P+G++ +I V++ N RVQVF+ DG FV GN +AV
Sbjct: 572 NGQLWYPKGMSTDGKGNIFVSEYRNKRVQVFKEDGAFVQVIQCNGNVTD-------VAVD 624
Query: 154 NTNRVIVSDSNNHRVQIF 171
N ++ V+ N+ VQ+F
Sbjct: 625 NEGKIYVATFKNNSVQVF 642
>gi|260794808|ref|XP_002592399.1| hypothetical protein BRAFLDRAFT_67264 [Branchiostoma floridae]
gi|229277618|gb|EEN48410.1| hypothetical protein BRAFLDRAFT_67264 [Branchiostoma floridae]
Length = 912
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 145/321 (45%), Gaps = 45/321 (14%)
Query: 24 IGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF 83
+G + R K+RL F G G EPG F+ P G+AV + I VAD N R+QV
Sbjct: 316 MGHHHSNQRGTVAPKQRLTF--GGEGLEPGQFSTPFGVAVSEEGEIFVADLQNFRIQV-- 371
Query: 84 PHFDLKTNCVFLAFT--------WPRGIAV-GPDNSIVVADSSNHRVQV---FQSDGTFV 131
F L+ V T P +A+ G N V+ ++ V+ + G +
Sbjct: 372 --FTLQGTFVRQFPTAVPGKHMILPYDVALDGKGNLWVLGRTAIESVEFAVQYDKQGRVL 429
Query: 132 GKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDSNNHRVQIFDVNGR-------------V 177
KF K+ Q P +AV + N ++++D + N V
Sbjct: 430 RKFKLKAIKSAQ---PKGVAVDTRRNHILITDMTGDDEDSDNDNDEDADNEDNSHSEILV 486
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS 237
F DGT V ++G + G ++ P +I V ++VSD N+ V + + +G+ + FG
Sbjct: 487 FMPDGTLVR---TVGQQQG-MKQPWFITVDGEGNILVSDYGNNCVCVCNEDGQFLFQFGG 542
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
EGS EGQLK P G+ D G I V D+ N+R+++F G+FL+ + G
Sbjct: 543 EGSGEGQLKGPCGICTDRAGNIIVADADNSRVEMFDKTGKFLKHI------TTDMTGPCA 596
Query: 298 VAVMSNGNILVCDRENHRIQV 318
VA+ G ++V D +H + +
Sbjct: 597 VAMTPQGQLVVTDDNDHTVTI 617
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 118/249 (47%), Gaps = 42/249 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F+ P G+AV + I VAD N R+QVF GTFV +F + + P+ +A+
Sbjct: 345 FSTPFGVAVSEEGEIFVADLQNFRIQVFTLQGTFVRQFPT-AVPGKHMILPYDVALDGKG 403
Query: 157 RVIVS-----DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTN 210
+ V +S VQ +D GRV + KF K+ Q P +AV + N
Sbjct: 404 NLWVLGRTAIESVEFAVQ-YDKQGRVLR-------KFKLKAIKSAQ---PKGVAVDTRRN 452
Query: 211 RVIVSD--------------------SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRG 250
++++D +++ + +F +G ++ + G + +K P
Sbjct: 453 HILITDMTGDDEDSDNDNDEDADNEDNSHSEILVFMPDGTLVRTVGQQQG----MKQPWF 508
Query: 251 VAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
+ VD +G I V D GNN + + DGQFL FG GSG+G+ KG G+ GNI+V D
Sbjct: 509 ITVDGEGNILVSDYGNNCVCVCNEDGQFLFQFGGEGSGEGQLKGPCGICTDRAGNIIVAD 568
Query: 311 RENHRIQVF 319
+N R+++F
Sbjct: 569 ADNSRVEMF 577
>gi|225175580|ref|ZP_03729574.1| NHL repeat containing protein [Dethiobacter alkaliphilus AHT 1]
gi|225168909|gb|EEG77709.1| NHL repeat containing protein [Dethiobacter alkaliphilus AHT 1]
Length = 335
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 15/222 (6%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PRG++ P +++ VAD+ N RV+VF +G V FG LE P + V++ V
Sbjct: 72 PRGVSSDPFDNVYVADNRNRRVRVFDKNGRAVNDFGQE-----HLEAP-FDLVAHNGAVF 125
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYI-AVSNTNRVIVSDSN 218
V+D VQ F+ G + +G + G++ L P I A +T + ++D
Sbjct: 126 VTDHIAGMVQRFNFGG-------SHMGTILASGDEDLGLFRPTGITADPDTGNLYITDIA 178
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
HRV + +G V+ FG G EG +P G+A+D I V D N R+Q+F PDG
Sbjct: 179 EHRVIVATRDGEVLFEFGGTGEAEGSFAYPGGIALDADKNIYVADGNNARVQVFNPDGTE 238
Query: 279 LRAFGCWGSGDGEFKGLEG-VAVMSNGNILVCDRENHRIQVF 319
+ GS D E G VAV NG I + D +HR+ VF
Sbjct: 239 VLYVIYGGSADNEQLSRPGNVAVDRNGYIWITDTFSHRVFVF 280
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 119/263 (45%), Gaps = 56/263 (21%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQV---------------CFPHFDLKTN--CVF------ 94
PRG++ P +++ VAD+ N RV+V FDL + VF
Sbjct: 72 PRGVSSDPFDNVYVADNRNRRVRVFDKNGRAVNDFGQEHLEAPFDLVAHNGAVFVTDHIA 131
Query: 95 -----------------------LAFTWPRGIAVGPDN-SIVVADSSNHRVQVFQSDGTF 130
L P GI PD ++ + D + HRV V DG
Sbjct: 132 GMVQRFNFGGSHMGTILASGDEDLGLFRPTGITADPDTGNLYITDIAEHRVIVATRDGEV 191
Query: 131 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGS 190
+ +FG G G +P IA+ + V+D NN RVQ+F+ +G ++ +V GS
Sbjct: 192 LFEFGGTGEAEGSFAYPGGIALDADKNIYVADGNNARVQVFNPDG----TEVLYVIYGGS 247
Query: 191 MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG-RVITSFGSEGSEEGQLKFPR 249
N+ QL P +AV + ++D+ +HRV +F NG +++TSFG G EG+L FP
Sbjct: 248 ADNE--QLSRPGNVAVDRNGYIWITDTFSHRVFVF--NGEQLMTSFGGLGIGEGELYFPY 303
Query: 250 GVAVDDQGYISVGDSGNNRIQIF 272
G+ DD G I V + RI +F
Sbjct: 304 GLDFDDNGNIYVTERALGRISVF 326
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 47/178 (26%)
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSE----- 238
F+ F S G L+ P ++ + V V+D+ N RV++FD NGR + FG E
Sbjct: 60 FLFHFDSAG-----LDTPRGVSSDPFDNVYVADNRNRRVRVFDKNGRAVNDFGQEHLEAP 114
Query: 239 ------------------------------------GSEEGQLKFPRGVAVD-DQGYISV 261
G E+ L P G+ D D G + +
Sbjct: 115 FDLVAHNGAVFVTDHIAGMVQRFNFGGSHMGTILASGDEDLGLFRPTGITADPDTGNLYI 174
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D +R+ + T DG+ L FG G +G F G+A+ ++ NI V D N R+QVF
Sbjct: 175 TDIAEHRVIVATRDGEVLFEFGGTGEAEGSFAYPGGIALDADKNIYVADGNNARVQVF 232
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 13/138 (9%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF----- 97
F+ G G G F +P GIA+ D +I VAD +N RVQV P T +++ +
Sbjct: 193 FEFGGTGEAEGSFAYPGGIALDADKNIYVADGNNARVQVFNPD---GTEVLYVIYGGSAD 249
Query: 98 ----TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
+ P +AV + I + D+ +HRV VF + + FG +G G+L P+ +
Sbjct: 250 NEQLSRPGNVAVDRNGYIWITDTFSHRVFVFNGE-QLMTSFGGLGIGEGELYFPYGLDFD 308
Query: 154 NTNRVIVSDSNNHRVQIF 171
+ + V++ R+ +F
Sbjct: 309 DNGNIYVTERALGRISVF 326
>gi|301118252|ref|XP_002906854.1| hypothetical protein PITG_03812 [Phytophthora infestans T30-4]
gi|262108203|gb|EEY66255.1| hypothetical protein PITG_03812 [Phytophthora infestans T30-4]
Length = 813
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 110 SIVVADSSNHRVQVFQS-DGTFVGKFGS-MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 167
S + DS NH V F + DG+F G+ G G+ G P IAV + V D NHR
Sbjct: 583 SFLAVDSGNHTVSQFNARDGSFCGRIGEGYGHLEGFFNSPQGIAVWKDQLLFVCDQCNHR 642
Query: 168 VQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS--------------NTNRVI 213
VQ+FD+ R + FG +G G+ P +A+ +++++
Sbjct: 643 VQVFDLITR------KCLRVFGQLGTSPGEFSFPTGLAICPALLETPKCNFGPHRSDKLV 696
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ-GYISVGDSGNNRIQIF 272
V+D+ N RVQ+ D+NG V S+ + P GV V + GYI V D+ N + +F
Sbjct: 697 VADTGNCRVQVLDLNGSVQLVLDSKATPFDLPMSPMGVWVQQRSGYILVSDTANLCVAVF 756
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
T G FL AFG G D F GVA+
Sbjct: 757 TNTGIFLSAFGATGEADTRFVQPVGVAI 784
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 29/176 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQS-DGTFVGKFGSMGNKAGQLEHPHYIAVS-- 153
F P+GIAV D + V D NHRVQVF + FG +G G+ P +A+
Sbjct: 619 FNSPQGIAVWKDQLLFVCDQCNHRVQVFDLITRKCLRVFGQLGTSPGEFSFPTGLAICPA 678
Query: 154 ------------NTNRVIVSDSNNHRVQIFDVNGR---VFQSDGT-FVGKFGSMGNKAGQ 197
+++++V+D+ N RVQ+ D+NG V S T F MG Q
Sbjct: 679 LLETPKCNFGPHRSDKLVVADTGNCRVQVLDLNGSVQLVLDSKATPFDLPMSPMGVWVQQ 738
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
+ ++VSD+ N V +F G +++FG+ G + + P GVA+
Sbjct: 739 ----------RSGYILVSDTANLCVAVFTNTGIFLSAFGATGEADTRFVQPVGVAI 784
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 79/184 (42%), Gaps = 36/184 (19%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT-NCVFL---------AFT 98
G G F P+GIAV D + V D NHRVQV FDL T C+ + F+
Sbjct: 613 GHLEGFFNSPQGIAVWKDQLLFVCDQCNHRVQV----FDLITRKCLRVFGQLGTSPGEFS 668
Query: 99 WPRGIAVGP--------------DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQL 144
+P G+A+ P + +VVAD+ N RVQV +G+ S
Sbjct: 669 FPTGLAICPALLETPKCNFGPHRSDKLVVADTGNCRVQVLDLNGSVQLVLDSKATPFDLP 728
Query: 145 EHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
P + V + ++VSD+ N V VF + G F+ FG+ G + P
Sbjct: 729 MSPMGVWVQQRSGYILVSDTANLCVA-------VFTNTGIFLSAFGATGEADTRFVQPVG 781
Query: 204 IAVS 207
+A++
Sbjct: 782 VAIA 785
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIF-DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
E Y++ +RV V DS+N +Q + F S G G+L P +AVD
Sbjct: 532 EQWLYVSDPVAHRVAVLDSSNLTLQFYIGATTYGHQEFCSNGFLPGELNHPSFLAVD--- 588
Query: 258 YISVGDSGNNRIQIFTP-DGQFLRAFG-CWGSGDGEFKGLEGVAVMSNGNILVCDRENHR 315
SGN+ + F DG F G +G +G F +G+AV + + VCD+ NHR
Sbjct: 589 ------SGNHTVSQFNARDGSFCGRIGEGYGHLEGFFNSPQGIAVWKDQLLFVCDQCNHR 642
Query: 316 IQVF 319
+QVF
Sbjct: 643 VQVF 646
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 28/142 (19%)
Query: 36 LQKRRLQFKIGSRGSEPGCFTWPRGIAVGP--------------DNSIVVADSSNHRVQV 81
L R+ G G+ PG F++P G+A+ P + +VVAD+ N RVQV
Sbjct: 648 LITRKCLRVFGQLGTSPGEFSFPTGLAICPALLETPKCNFGPHRSDKLVVADTGNCRVQV 707
Query: 82 CFPHFDL--KTNCVFLAFTWPRGIAVGP--------DNSIVVADSSNHRVQVFQSDGTFV 131
DL V + P + + P I+V+D++N V VF + G F+
Sbjct: 708 ----LDLNGSVQLVLDSKATPFDLPMSPMGVWVQQRSGYILVSDTANLCVAVFTNTGIFL 763
Query: 132 GKFGSMGNKAGQLEHPHYIAVS 153
FG+ G + P +A++
Sbjct: 764 SAFGATGEADTRFVQPVGVAIA 785
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 77/194 (39%), Gaps = 40/194 (20%)
Query: 100 PRGIAVGP-DNSIVVADSSNHRVQVFQSDGTFVGKFGSM-----GNKAGQLEHPHYIAVS 153
PRG+AV +D +++ ++VF+ V K ++ G+ A L+ P + +S
Sbjct: 228 PRGLAVDDVAGEFYASDEASNCIRVFKLPAITVAKSVALERSISGSHAMVLKRPTGLDLS 287
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+ + V+V D+ N R+ VF G FV G G G+
Sbjct: 288 HYH-VVVCDTGNSRLA-------VFAKRGAFVQAIGRKGINGGEF--------------- 324
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
+ V++ +V R IT S+ G ++Q D GN R+QI
Sbjct: 325 ---YDLRDVKLANVRKRAITRGVQHESDAG--------VANEQFEAIAADCGNYRVQILN 373
Query: 274 PDGQFLRAFGCWGS 287
G+FLR GS
Sbjct: 374 ERGEFLRQLSLLGS 387
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 26/214 (12%)
Query: 111 IVVADSSN--HRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
I+VAD++ H + F + + L P +AV+ R++V + RV
Sbjct: 121 ILVADNTAKIHGFDRKTKELLFTSSWSYQKDANLSLGTPMAMAVTRCGRLLVCEQECPRV 180
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE-----------HPHY-----IAVSN-TNR 211
+ D+ +F T + GN++ L+ PH +AV +
Sbjct: 181 VVIDLR-VLFHLYRTCLLANQVTGNRSCNLDASSARIAFIDGKPHLARPRGLAVDDVAGE 239
Query: 212 VIVSDSNNHRVQIFDVNG-RVITSFGSE----GSEEGQLKFPRGVAVDDQGYISVGDSGN 266
SD ++ +++F + V S E GS LK P G+ + ++ V D+GN
Sbjct: 240 FYASDEASNCIRVFKLPAITVAKSVALERSISGSHAMVLKRPTGLDLS-HYHVVVCDTGN 298
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
+R+ +F G F++A G G GEF L V +
Sbjct: 299 SRLAVFAKRGAFVQAIGRKGINGGEFYDLRDVKL 332
>gi|260785708|ref|XP_002587902.1| hypothetical protein BRAFLDRAFT_87290 [Branchiostoma floridae]
gi|229273057|gb|EEN43913.1| hypothetical protein BRAFLDRAFT_87290 [Branchiostoma floridae]
Length = 1664
Score = 97.8 bits (242), Expect = 5e-18, Method: Composition-based stats.
Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 30/210 (14%)
Query: 114 ADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY---IAVS-NTNRVIVSDSNNHRVQ 169
+ NH V ++ +DGT + F L+ Y IAV TN ++V+D++ VQ
Sbjct: 1478 GEKPNHIV-LYSTDGTAMAGF--------DLKKSIYFRGIAVDMRTNHILVTDADQDEVQ 1528
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
VF+ DG+ V ++ + G++ P YI V ++VSD +++ V ++D +G
Sbjct: 1529 -------VFRPDGSLVR---AVRHPRGEMTRPRYITVDGEGNILVSDWDSNFVYVYDASG 1578
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
+ + F GS EGQLK P G+ D G I V DSGN R+QIFT G+F+R
Sbjct: 1579 KFLFQFKGYGSGEGQLKRPTGICTDSLGEIIVADSGNQRVQIFTRHGEFVRTV------R 1632
Query: 290 GEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FK EG+AV G ++V D + VF
Sbjct: 1633 TGFKP-EGLAVGPEGQLVVTDWYKDTVTVF 1661
Score = 78.6 bits (192), Expect = 4e-12, Method: Composition-based stats.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 37/213 (17%)
Query: 36 LQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL 95
L++R + F G G+EPG F +PRG+ V P N I V D +N +VQV H T V+L
Sbjct: 673 LKQRVITF--GGEGTEPGKFQFPRGVVVSPSNEIFVTDKNNGQVQV---H---STEGVYL 724
Query: 96 AFTWPRGIAVGPDNSIVVAD----------SSNHRVQVFQSDGTFVGKFG-SMGNKAGQL 144
RG + + + + +++H VQ + +DGT + F M N
Sbjct: 725 RHFPTRGTVITTHDVCMDGNGTLWVVGRGGTADHVVQ-YSTDGTAMAGFELKMSNDT--- 780
Query: 145 EHPHYIAVS-NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
IAV TN ++VSD + V VF+ DG+ V ++ + G++ HP Y
Sbjct: 781 ---RGIAVDMRTNHILVSDPDQGEVL-------VFRPDGSLV---RTVQHPRGEMTHPRY 827
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
I V ++VSD + V ++D +G+ + FG
Sbjct: 828 ITVDGEGNIVVSDWVTYCVYVYDESGKFLFQFG 860
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/143 (34%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
Query: 59 RGIAVG-PDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--AFTWPRGIAVGPDNSIVVAD 115
RGIAV N I+V D+ VQV P L T PR I V + +I+V+D
Sbjct: 1506 RGIAVDMRTNHILVTDADQDEVQVFRPDGSLVRAVRHPRGEMTRPRYITVDGEGNILVSD 1565
Query: 116 SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 175
++ V V+ + G F+ +F G+ GQL+ P I + +IV+DS N RVQIF +G
Sbjct: 1566 WDSNFVYVYDASGKFLFQFKGYGSGEGQLKRPTGICTDSLGEIIVADSGNQRVQIFTRHG 1625
Query: 176 RV-------FQSDGTFVGKFGSM 191
F+ +G VG G +
Sbjct: 1626 EFVRTVRTGFKPEGLAVGPEGQL 1648
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 39/185 (21%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG---RVFQSDGTFV----- 185
FG G + G+ + P + VS +N + V+D NN +VQ+ G R F + GT +
Sbjct: 680 FGGEGTEPGKFQFPRGVVVSPSNEIFVTDKNNGQVQVHSTEGVYLRHFPTRGTVITTHDV 739
Query: 186 -----GKFGSMGNKAGQLEH---------------------PHYIAVS-NTNRVIVSDSN 218
G +G + G +H IAV TN ++VSD +
Sbjct: 740 CMDGNGTLWVVG-RGGTADHVVQYSTDGTAMAGFELKMSNDTRGIAVDMRTNHILVSDPD 798
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
V +F +G ++ + G++ PR + VD +G I V D + ++ G+F
Sbjct: 799 QGEVLVFRPDGSLVRTVQHP---RGEMTHPRYITVDGEGNIVVSDWVTYCVYVYDESGKF 855
Query: 279 LRAFG 283
L FG
Sbjct: 856 LFQFG 860
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
++ RVIT FG EG+E G+ +FPRGV V I V D N ++Q+ + +G +LR F
Sbjct: 672 NLKQRVIT-FGGEGTEPGKFQFPRGVVVSPSNEIFVTDKNNGQVQVHSTEGVYLRHFPTR 730
Query: 286 GS 287
G+
Sbjct: 731 GT 732
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 132 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS-NNHRVQIF--------------DVNGR 176
G+ G G+K G E P T + SDS ++ RV+I D+ G
Sbjct: 608 GRPGDKGDKLG--EDPTAKEEGKTVAMQDSDSESDRRVEILCTEAPEQERHTAEIDLEGV 665
Query: 177 VFQSDGTF---VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT 233
S G V FG G + G+ + P + VS +N + V+D NN +VQ+ G +
Sbjct: 666 AHGSTGNLKQRVITFGGEGTEPGKFQFPRGVVVSPSNEIFVTDKNNGQVQVHSTEGVYLR 725
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISV---GDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
F + G+ + V +D G + V G + ++ +Q ++ DG + F S D
Sbjct: 726 HFPTRGT----VITTHDVCMDGNGTLWVVGRGGTADHVVQ-YSTDGTAMAGFELKMSND- 779
Query: 291 EFKGLEGVAV-MSNGNILVCDRENHRIQVF 319
G+AV M +ILV D + + VF
Sbjct: 780 ----TRGIAVDMRTNHILVSDPDQGEVLVF 805
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ F+ GS G P GI I+VADS N RVQ+ H + V F
Sbjct: 1579 KFLFQFKGYGSGEGQLKRPTGICTDSLGEIIVADSGNQRVQIFTRHGEF-VRTVRTGFK- 1636
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVF 124
P G+AVGP+ +VV D V VF
Sbjct: 1637 PEGLAVGPEGQLVVTDWYKDTVTVF 1661
>gi|428208104|ref|YP_007092457.1| NHL repeat containing protein [Chroococcidiopsis thermalis PCC
7203]
gi|428010025|gb|AFY88588.1| NHL repeat containing protein [Chroococcidiopsis thermalis PCC
7203]
Length = 386
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 27/261 (10%)
Query: 39 RRLQFKIGSRGSEPGCFTWPRGIAVGPDN-SIVVADSSNHRVQVCFPHFDLKTNCVFLAF 97
R F G PG P+G+AV + ++ VA+ ++QV FD + N +
Sbjct: 38 RPANFAAGETPFTPGTLAIPQGVAVQEETGNVFVANDVTDQIQV----FDSQGNYLQGIG 93
Query: 98 TWP---------RGIAVGPDN-SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH- 146
IA P+ ++ D +N+R+ VF G +V + G +G +E
Sbjct: 94 GTGSGPGQSDGQSAIAFEPNTGNLYAGDVNNNRINVFDPQGNYVNSI-AQGQFSGLIEGR 152
Query: 147 ----PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
P I N V D ++ R+ F+ S G G GS G GQ + P
Sbjct: 153 PFFGPSGIVFDNKGNGYVGDYSSDRILKFN------SSSGEVTGSIGSSGTTPGQFQGPS 206
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
IAV + ++V+D N+R+Q+ G + +FG EG+ EG+ P V VD++ + V
Sbjct: 207 GIAVRSDGNLVVTDQFNNRIQVVSPEGDALLTFGKEGTGEGEFNQPIDVEVDEKDNLYVT 266
Query: 263 DSGNNRIQIFTPDGQFLRAFG 283
DS N+R+Q+F +G FL AFG
Sbjct: 267 DSINSRVQVFDKNGNFLSAFG 287
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 112/228 (49%), Gaps = 16/228 (7%)
Query: 100 PRGIAVGPDN-SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNR 157
P+G+AV + ++ VA+ ++QVF S G ++ G G+ GQ + IA NT
Sbjct: 57 PQGVAVQEETGNVFVANDVTDQIQVFDSQGNYLQGIGGTGSGPGQSDGQSAIAFEPNTGN 116
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH-----PHYIAVSNTNRV 212
+ D NN+R+ +FD G S + G +G +E P I N
Sbjct: 117 LYAGDVNNNRINVFDPQGNYVNSI--------AQGQFSGLIEGRPFFGPSGIVFDNKGNG 168
Query: 213 IVSDSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
V D ++ R+ F+ + G V S GS G+ GQ + P G+AV G + V D NNRIQ+
Sbjct: 169 YVGDYSSDRILKFNSSSGEVTGSIGSSGTTPGQFQGPSGIAVRSDGNLVVTDQFNNRIQV 228
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+P+G L FG G+G+GEF V V N+ V D N R+QVF
Sbjct: 229 VSPEGDALLTFGKEGTGEGEFNQPIDVEVDEKDNLYVTDSINSRVQVF 276
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Query: 35 YLQKRRLQF---------KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH 85
Y R L+F IGS G+ PG F P GIAV D ++VV D N+R+QV P
Sbjct: 173 YSSDRILKFNSSSGEVTGSIGSSGTTPGQFQGPSGIAVRSDGNLVVTDQFNNRIQVVSPE 232
Query: 86 FDL-----KTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNK 140
D K F P + V +++ V DS N RVQVF +G F+ FG
Sbjct: 233 GDALLTFGKEGTGEGEFNQPIDVEVDEKDNLYVTDSINSRVQVFDKNGNFLSAFGEPARD 292
Query: 141 A 141
A
Sbjct: 293 A 293
>gi|260811664|ref|XP_002600542.1| hypothetical protein BRAFLDRAFT_205327 [Branchiostoma floridae]
gi|229285829|gb|EEN56554.1| hypothetical protein BRAFLDRAFT_205327 [Branchiostoma floridae]
Length = 667
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 131/285 (45%), Gaps = 38/285 (13%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF----T 98
IG +GS G P G+AV + +IVV D N RVQ+ FD T +F
Sbjct: 410 LTIGRKGSGVGELDSPLGVAVDKEGNIVVVDRGNQRVQI----FDADTGQFLYSFPVEGE 465
Query: 99 WPRGIAVGPDNSI-VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P I V + I V + N ++ + +G + K+ L P IA+ R
Sbjct: 466 HPFDIDVDSNGRIHVTSYGENFGIRCYSKEGNLLKTL-----KSDCLLDPSGIAILTDGR 520
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI-VSD 216
++V D + + Q D + G GQL+ P ++AV + ++ V+D
Sbjct: 521 IVVVDHTHQSCLLL-------QPD--LIRDIGK-----GQLQDPRFVAVDESRGLMFVTD 566
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
RV FD+ G ++ +FG++G ++GQ P G+ +D G I VG+ + R+Q+F PDG
Sbjct: 567 YEEERVFSFDLEGNLLLAFGNQGEDKGQFLGPNGITLDPAGNIIVGNLRDGRVQVFGPDG 626
Query: 277 QFLRAFGCWGSGDGEFKGLE--GVAVMSNGNILVCDRENHRIQVF 319
F+R KG E G+A+ +G I V + + I+++
Sbjct: 627 TFIRTV-------ATVKGNETGGLALTPDGYIAVACYKGYCIELY 664
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 18/88 (20%)
Query: 217 SNNHRVQIFDVNGRVI----------------TSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
+ NHR+++ VN R++ + G +GS G+L P GVAVD +G I
Sbjct: 379 TGNHRLEV-KVNSRMVRGSPFDVKVQGSAIPVLTIGRKGSGVGELDSPLGVAVDKEGNIV 437
Query: 261 VGDSGNNRIQIFTPD-GQFLRAFGCWGS 287
V D GN R+QIF D GQFL +F G
Sbjct: 438 VVDRGNQRVQIFDADTGQFLYSFPVEGE 465
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 22/137 (16%)
Query: 11 NSCFLLQTLLVSGIGQ-VGTTPR-------------SQYLQKRRLQFKI--------GSR 48
SC LLQ L+ IG+ PR + Y ++R F + G++
Sbjct: 529 QSCLLLQPDLIRDIGKGQLQDPRFVAVDESRGLMFVTDYEEERVFSFDLEGNLLLAFGNQ 588
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPD 108
G + G F P GI + P +I+V + + RVQV P + G+A+ PD
Sbjct: 589 GEDKGQFLGPNGITLDPAGNIIVGNLRDGRVQVFGPDGTFIRTVATVKGNETGGLALTPD 648
Query: 109 NSIVVADSSNHRVQVFQ 125
I VA + +++++
Sbjct: 649 GYIAVACYKGYCIELYR 665
>gi|291231331|ref|XP_002735618.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 726
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 140/283 (49%), Gaps = 31/283 (10%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF---LAFTW-P 100
+G GSE G + P GI + V AD N+RV + + K + F A T+ P
Sbjct: 465 MGKAGSE-GELSNPWGITINKHGDFVTADFRNNRVVIHDRDGNYKQSFTFTGQFAETFTP 523
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVI 159
+ + DN + D +N+++ V G + KF ++ ++++P IA++ T V
Sbjct: 524 LDVVISDDNEYFMTDINNNQIVVSDEYGKLIRKF-----RSSEIDNPRGIAINPVTKNVY 578
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
VS+ + H + R + G ++ FG G+K G+ P+ +A+++ V V D N
Sbjct: 579 VSEWSKHCI-------RKYTQGGVYIKSFGKSGDKQGEFHKPYLLAINSKGMVYVPDCFN 631
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HR+Q+F+ + + + F S G + ++ +GVAVD Y+ V S ++++ GQF+
Sbjct: 632 HRIQVFNSDDQFMFEFSSTG--DSRMSRSKGVAVDKNDYVYV--SSDDKVTKHDSYGQFI 687
Query: 280 RAFGCWGSGDGEFKGLE---GVAVMSNGNILVCDRENHRIQVF 319
D + GL GVAV ++G I V DR N+ I+VF
Sbjct: 688 CKI------DSDKDGLSYPFGVAVCNDGRIAVVDRGNNCIKVF 724
>gi|290982352|ref|XP_002673894.1| predicted protein [Naegleria gruberi]
gi|284087481|gb|EFC41150.1| predicted protein [Naegleria gruberi]
Length = 2807
Score = 97.8 bits (242), Expect = 6e-18, Method: Composition-based stats.
Identities = 68/251 (27%), Positives = 122/251 (48%), Gaps = 35/251 (13%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVC------------FPHFDLKTNCVFLAFTWPRG 102
+P G+ + + I+VAD NHR++ F D+ T A+++
Sbjct: 763 LNYPYGLTISSTSEIIVADYYNHRIRKINTSGYISTIAGGFGDGDMATTSFISAYSFEFT 822
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDG-----TFVGKFGSMGNKA----GQLEHPHYIAVS 153
+ + I++ADS+NHR++ + G + G G G++ QL +P+ IA+S
Sbjct: 823 L----NGEIIIADSNNHRIRKITTLGYISTISGTGTAGYNGDEILATNSQLNNPNGIALS 878
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG--NKAGQLEHPHYIAVSNTNR 211
+ + + ++D+NNHR++ + +G + GT G + G + QL +P+ IA+
Sbjct: 879 SNSEIYIADTNNHRIRKVNASGYISTIAGTGTGGYNGDGVLATSAQLNYPNGIAIQENGE 938
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGS--------EGSEEGQLKFPRGVAVDDQGYISVGD 263
++++D+NNHR++ NG + T GS + QL+ P GVA+ I + D
Sbjct: 939 ILIADNNNHRIRKIRTNGYISTIAGSGIGGFTDNTVATSAQLENPLGVAIGSNKEIFLTD 998
Query: 264 SGNNRIQIFTP 274
S N RI+ P
Sbjct: 999 STNKRIRKLIP 1009
Score = 95.5 bits (236), Expect = 3e-17, Method: Composition-based stats.
Identities = 82/304 (26%), Positives = 138/304 (45%), Gaps = 46/304 (15%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC----------VFLA----FTWP 100
+P +AV I + D++N+R++ + T LA +P
Sbjct: 707 LNYPFSVAVSSVGEIYIVDTNNYRIRKINTSGYISTIAGTGTGGYNGDSILATSAQLNYP 766
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDG---TFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
G+ + + I+VAD NHR++ + G T G FG + +
Sbjct: 767 YGLTISSTSEIIVADYYNHRIRKINTSGYISTIAGGFGDGDMATTSFISAYSFEFTLNGE 826
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA----GQLEHPHYIAVSNTNRVI 213
+I++DSNNHR++ G + GT G G G++ QL +P+ IA+S+ + +
Sbjct: 827 IIIADSNNHRIRKITTLGYISTISGT--GTAGYNGDEILATNSQLNNPNGIALSSNSEIY 884
Query: 214 VSDSNNHRVQIFDVNGRVITSFGS-EGSEEG--------QLKFPRGVAVDDQGYISVGDS 264
++D+NNHR++ + +G + T G+ G G QL +P G+A+ + G I + D+
Sbjct: 885 IADTNNHRIRKVNASGYISTIAGTGTGGYNGDGVLATSAQLNYPNGIAIQENGEILIADN 944
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKG--------LE---GVAVMSNGNILVCDREN 313
N+RI+ +G ++ GSG G F LE GVA+ SN I + D N
Sbjct: 945 NNHRIRKIRTNG-YISTIA--GSGIGGFTDNTVATSAQLENPLGVAIGSNKEIFLTDSTN 1001
Query: 314 HRIQ 317
RI+
Sbjct: 1002 KRIR 1005
Score = 95.5 bits (236), Expect = 3e-17, Method: Composition-based stats.
Identities = 75/303 (24%), Positives = 133/303 (43%), Gaps = 43/303 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRV-QVCFPHF----------------DLKTNCVFLAF 97
+PR +A+ I +AD +NHR+ ++ + L TN
Sbjct: 539 LNYPRSVAISSSGEIYIADFNNHRIRKINISGYISTIAGTGSVGYSGDGGLATNA---QL 595
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDG--TFVGKFGSMG-------NKAGQLEHPH 148
+P+ +AV I +AD+ NHR++ + G + + GS+G + QL +P
Sbjct: 596 YYPQTVAVSSSGEIYIADAYNHRIRKINTSGYISTIAGTGSVGYSGDGGLATSAQLYYPF 655
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGRV--FQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
+A+S+ + ++D+ NHR++ + +G + G+ + QL +P +AV
Sbjct: 656 SVAISSVGEIYIADTYNHRIRKINTSGYISTISGTGSGGYSGDGGLATSAQLNYPFSVAV 715
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGS-EGSEEG--------QLKFPRGVAVDDQG 257
S+ + + D+NN+R++ + +G + T G+ G G QL +P G+ +
Sbjct: 716 SSVGEIYIVDTNNYRIRKINTSGYISTIAGTGTGGYNGDSILATSAQLNYPYGLTISSTS 775
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD---GEFKGLEGVAVMSNGNILVCDRENH 314
I V D N+RI+ G G +G GD F NG I++ D NH
Sbjct: 776 EIIVADYYNHRIRKINTSGYISTIAGGFGDGDMATTSFISAYSFEFTLNGEIIIADSNNH 835
Query: 315 RIQ 317
RI+
Sbjct: 836 RIR 838
Score = 93.2 bits (230), Expect = 1e-16, Method: Composition-based stats.
Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 53/311 (17%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQ----------VCFPHFDLKTNCVFLA----FTWP 100
+P G A + + +AD++N+R++ V + LA +P
Sbjct: 483 LNYPYGTAFSSNGDMYIADTNNNRIRKVTTSGYISTVAGSGTGGYSGDGGLATSAQLNYP 542
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDG--TFVGKFGSMGNKA-------GQLEHPHYIA 151
R +A+ I +AD +NHR++ G + + GS+G QL +P +A
Sbjct: 543 RSVAISSSGEIYIADFNNHRIRKINISGYISTIAGTGSVGYSGDGGLATNAQLYYPQTVA 602
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN----KAGQLEHPHYIAVS 207
VS++ + ++D+ NHR++ + +G + GT G G G+ + QL +P +A+S
Sbjct: 603 VSSSGEIYIADAYNHRIRKINTSGYISTIAGT--GSVGYSGDGGLATSAQLYYPFSVAIS 660
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG---------SEEGQLKFPRGVAVDDQGY 258
+ + ++D+ NHR++ + +G + T G+ + QL +P VAV G
Sbjct: 661 SVGEIYIADTYNHRIRKINTSGYISTISGTGSGGYSGDGGLATSAQLNYPFSVAVSSVGE 720
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE------------GVAVMSNGNI 306
I + D+ N RI+ G ++ G+G G + G G+ + S I
Sbjct: 721 IYIVDTNNYRIRKINTSG-YISTIA--GTGTGGYNGDSILATSAQLNYPYGLTISSTSEI 777
Query: 307 LVCDRENHRIQ 317
+V D NHRI+
Sbjct: 778 IVADYYNHRIR 788
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 43/301 (14%)
Query: 57 WPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC--------------VFLAFTWPRG 102
+P+ +AV I +AD+ NHR++ + T +P
Sbjct: 597 YPQTVAVSSSGEIYIADAYNHRIRKINTSGYISTIAGTGSVGYSGDGGLATSAQLYYPFS 656
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGN----------KAGQLEHPHYIAV 152
+A+ I +AD+ NHR++ + G ++ G+ + QL +P +AV
Sbjct: 657 VAISSVGEIYIADTYNHRIRKINTSG-YISTISGTGSGGYSGDGGLATSAQLNYPFSVAV 715
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVSNTN 210
S+ + + D+NN+R++ + +G + GT G + S+ + QL +P+ + +S+T+
Sbjct: 716 SSVGEIYIVDTNNYRIRKINTSGYISTIAGTGTGGYNGDSILATSAQLNYPYGLTISSTS 775
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD-----QGYISVGDSG 265
+IV+D NHR++ + +G + T G G +G + ++ G I + DS
Sbjct: 776 EIIVADYYNHRIRKINTSGYISTIAGGFG--DGDMATTSFISAYSFEFTLNGEIIIADSN 833
Query: 266 NNRIQIFTPDGQFLRAFGCWGSG---------DGEFKGLEGVAVMSNGNILVCDRENHRI 316
N+RI+ T G G +G + + G+A+ SN I + D NHRI
Sbjct: 834 NHRIRKITTLGYISTISGTGTAGYNGDEILATNSQLNNPNGIALSSNSEIYIADTNNHRI 893
Query: 317 Q 317
+
Sbjct: 894 R 894
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 74/303 (24%), Positives = 140/303 (46%), Gaps = 44/303 (14%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC--------------VFLAFTWPRGI 103
P G+A+ I++ADS+N+R++ + + T + P +
Sbjct: 53 PAGVAISSIGEIIIADSNNNRIRKISTNGYISTIAGTGSASFGGDGGLAINAQLNSPSAV 112
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGN----------KAGQLEHPHYIAVS 153
++ + + ++D+ N R++ ++G ++ G + QL +P +A+S
Sbjct: 113 SISSNGDMYISDTGNQRIRKISTNG-YISTIAGSGTGGYSGDGGLATSAQLYYPKGVAIS 171
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA--GQLEHPHYIAVSNTNR 211
+N + ++D+ NHR++ + NG + G+ G +G G A Q+ +P +++S+T
Sbjct: 172 PSNEIYIADTYNHRIRKVNTNGYISTVAGSGTGGYGGDGGLATSAQVNYPFSVSISSTGE 231
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGS-------EG--SEEGQLKFPRGVAVDDQGYISVG 262
+ ++D N R++ G + T GS +G + QL +P GV++ G I +
Sbjct: 232 IYIADYYNQRIRKVTTYGFISTVAGSGTAGYSGDGGLATSAQLYYPLGVSISSAGEIYIA 291
Query: 263 DSGNNRIQIFTPDGQFLRAFG-CWG-SGDG------EFKGLEGVAVMSNGNILVCDRENH 314
D N+RI+ T G G +G SGDG + GV+ SNG I + D N+
Sbjct: 292 DYYNHRIRKVTTSGYISTIAGTTYGFSGDGGLATSAQLYYPNGVSTGSNGEIFIADTYNY 351
Query: 315 RIQ 317
RI+
Sbjct: 352 RIR 354
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 128 GTFVGKFGSMGNKA--GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFV 185
GT G +G GN A +L +P+ A S+ + ++D+NN+R++ +G + G+
Sbjct: 466 GTLNG-YGGDGNLATSARLNYPYGTAFSSNGDMYIADTNNNRIRKVTTSGYISTVAGSGT 524
Query: 186 GKFGSMGNKA--GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT-----SFGSE 238
G + G A QL +P +A+S++ + ++D NNHR++ +++G + T S G
Sbjct: 525 GGYSGDGGLATSAQLNYPRSVAISSSGEIYIADFNNHRIRKINISGYISTIAGTGSVGYS 584
Query: 239 G----SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF--LRAFGCWG-SGDGE 291
G + QL +P+ VAV G I + D+ N+RI+ G + G G SGDG
Sbjct: 585 GDGGLATNAQLYYPQTVAVSSSGEIYIADAYNHRIRKINTSGYISTIAGTGSVGYSGDGG 644
Query: 292 FKGLE------GVAVMSNGNILVCDRENHRIQ 317
VA+ S G I + D NHRI+
Sbjct: 645 LATSAQLYYPFSVAISSVGEIYIADTYNHRIR 676
Score = 71.2 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 56/244 (22%), Positives = 108/244 (44%), Gaps = 29/244 (11%)
Query: 57 WPRGIAVGPDNSIVVADSSNHRVQ----------VCFPHFDLKTNCVFLAFT----WPRG 102
+P+G+A+ P N I +AD+ NHR++ V LA + +P
Sbjct: 164 YPKGVAISPSNEIYIADTYNHRIRKVNTNGYISTVAGSGTGGYGGDGGLATSAQVNYPFS 223
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDG--TFVGKFGSMG-------NKAGQLEHPHYIAVS 153
+++ I +AD N R++ + G + V G+ G + QL +P +++S
Sbjct: 224 VSISSTGEIYIADYYNQRIRKVTTYGFISTVAGSGTAGYSGDGGLATSAQLYYPLGVSIS 283
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG-NKAGQLEHPHYIAVSNTNRV 212
+ + ++D NHR++ +G + GT G G G + QL +P+ ++ + +
Sbjct: 284 SAGEIYIADYYNHRIRKVTTSGYISTIAGTTYGFSGDGGLATSAQLYYPNGVSTGSNGEI 343
Query: 213 IVSDSNNHRVQIFDVNGRVIT-----SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
++D+ N+R++ + +G + T SFG+ G P G + G I D+
Sbjct: 344 FIADTYNYRIRKINTSGYISTIAGTSSFGNNIPATGANIAPTGSPTLNNGKIVFADTSGQ 403
Query: 268 RIQI 271
Q+
Sbjct: 404 VRQV 407
Score = 70.9 bits (172), Expect = 8e-10, Method: Composition-based stats.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 119 HRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVF 178
+ + G+ VG G + A QL P +A+S+ +I++DSNN+R++ NG +
Sbjct: 27 YNITTIAGGGSVVGD-GLLATNA-QLAIPAGVAISSIGEIIIADSNNNRIRKISTNGYIS 84
Query: 179 QSDGTFVGKFGSMGNKA--GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT--- 233
GT FG G A QL P +++S+ + +SD+ N R++ NG + T
Sbjct: 85 TIAGTGSASFGGDGGLAINAQLNSPSAVSISSNGDMYISDTGNQRIRKISTNGYISTIAG 144
Query: 234 ------SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
S + QL +P+GVA+ I + D+ N+RI+ +G
Sbjct: 145 SGTGGYSGDGGLATSAQLYYPKGVAISPSNEIYIADTYNHRIRKVNTNG 193
>gi|290973007|ref|XP_002669241.1| predicted protein [Naegleria gruberi]
gi|284082786|gb|EFC36497.1| predicted protein [Naegleria gruberi]
Length = 747
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 115/244 (47%), Gaps = 26/244 (10%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQ----VFQSDGTFVGKFGSMGNKA--GQLEHPHYIAVS 153
P GI VG I+ DS R + GT +FG G+ A QL P IA+S
Sbjct: 105 PTGIVVGTRGEILFVDSDRIRKIENGIITTIAGTGDSRFGGDGDLATKAQLNSPRGIAIS 164
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA--GQLEHPHYIAVSNTNR 211
+T + ++D+ NHR++ +NG + GT +FG G+ A QL +P IA+S+T
Sbjct: 165 STGEIYIADTYNHRIRRIALNGTINTVAGTGDSRFGGDGDLATKAQLNYPMGIAISSTGE 224
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGS---------EGSEEGQLKFPRGVAVDDQGYISVG 262
+ ++D+ N R++ +NG + T G+ + + + QL PRG+A+ G I
Sbjct: 225 IYIADTFNERIRRIALNGTINTIAGTGVLGLSGDGDLATKAQLNTPRGIAISSTGEIYFA 284
Query: 263 DSGNNRIQIFTPDGQFLRAFGC-----WGSGD----GEFKGLEGVAVMSNGNILVCDREN 313
D+ N RI+ +G G G GD + G+A+ S G I + D N
Sbjct: 285 DTSNQRIRRIALNGIIDTIAGTGDPRFGGDGDLATKAQLNSPRGIAISSTGEIYIADTYN 344
Query: 314 HRIQ 317
RI+
Sbjct: 345 QRIR 348
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 132/308 (42%), Gaps = 51/308 (16%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPH-----------------FDLKTNCVFLAFTWP 100
PRGIA+ I +AD+ NHR++ + DL T +P
Sbjct: 158 PRGIAISSTGEIYIADTYNHRIRRIALNGTINTVAGTGDSRFGGDGDLATKA---QLNYP 214
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTF-----VGKFGSMGN----KAGQLEHPHYIA 151
GIA+ I +AD+ N R++ +GT G G G+ QL P IA
Sbjct: 215 MGIAISSTGEIYIADTFNERIRRIALNGTINTIAGTGVLGLSGDGDLATKAQLNTPRGIA 274
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA--GQLEHPHYIAVSNT 209
+S+T + +D++N R++ +NG + GT +FG G+ A QL P IA+S+T
Sbjct: 275 ISSTGEIYFADTSNQRIRRIALNGIIDTIAGTGDPRFGGDGDLATKAQLNSPRGIAISST 334
Query: 210 NRVIVSDSNNHRVQIFDVNGRVIT----SFGSEG-------SEEGQLKFPRGVAVDDQGY 258
+ ++D+ N R++ +N + T FG G S + L P VA G
Sbjct: 335 GEIYIADTYNQRIRRIALNTNISTFAGSGFGYSGYVGDGGLSTDALLNTPLSVACSSNGE 394
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSG---------DGEFKGLEGVAVMSNGNILVC 309
I + D+ N+RI+ + + G SG + + V SNG I
Sbjct: 395 IYIADTYNHRIRKISLNNTITTIAGTGDSGFSGDGGLAINARLSSPADIVVNSNGVIYFS 454
Query: 310 DRENHRIQ 317
D +N+RI+
Sbjct: 455 DYDNNRIR 462
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 42/261 (16%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHF-----------------DLKTNCVFLAF 97
+P GIA+ I +AD+ N R++ + DL T
Sbjct: 211 LNYPMGIAISSTGEIYIADTFNERIRRIALNGTINTIAGTGVLGLSGDGDLATKA---QL 267
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDG---TFVG----KFGSMGNKA--GQLEHPH 148
PRGIA+ I AD+SN R++ +G T G +FG G+ A QL P
Sbjct: 268 NTPRGIAISSTGEIYFADTSNQRIRRIALNGIIDTIAGTGDPRFGGDGDLATKAQLNSPR 327
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA----GQLEHPHYI 204
IA+S+T + ++D+ N R++ +N + G+ G G +G+ L P +
Sbjct: 328 GIAISSTGEIYIADTYNQRIRRIALNTNISTFAGSGFGYSGYVGDGGLSTDALLNTPLSV 387
Query: 205 AVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSE---------EGQLKFPRGVAVDD 255
A S+ + ++D+ NHR++ +N + T G+ S +L P + V+
Sbjct: 388 ACSSNGEIYIADTYNHRIRKISLNNTITTIAGTGDSGFSGDGGLAINARLSSPADIVVNS 447
Query: 256 QGYISVGDSGNNRIQIFTPDG 276
G I D NNRI+ +G
Sbjct: 448 NGVIYFSDYDNNRIRKIASNG 468
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 114/296 (38%), Gaps = 55/296 (18%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--------------------F 97
PRGIA+ I +AD+ N R++ L TN A
Sbjct: 326 PRGIAISSTGEIYIADTYNQRIR----RIALNTNISTFAGSGFGYSGYVGDGGLSTDALL 381
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKA---------GQLEHPH 148
P +A + I +AD+ NHR++ + T G+ + +L P
Sbjct: 382 NTPLSVACSSNGEIYIADTYNHRIRKISLNNTITTIAGTGDSGFSGDGGLAINARLSSPA 441
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA--GQLEHPHYIAV 206
I V++ + SD +N+R++ NG + G+ V G G A QL P+ I
Sbjct: 442 DIVVNSNGVIYFSDYDNNRIRKIASNGIITTVVGSGVIGSGGDGGLAINAQLNRPYGITF 501
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQ-----------LKFPRGVAVDD 255
++ + + + R++ VNG + T GS+ + G L P + ++
Sbjct: 502 NSNAEMYIVERMGSRIRKVGVNGIITTVAGSDIASGGTTSVGSLATKTVLNAPSKIVINS 561
Query: 256 QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG-EFKGLEGVAVMSNGNILVCD 310
I DS + R+ DG SG G F+ G+A+ S+G + + D
Sbjct: 562 NNEIIFSDSLHGRVLKIGLDGII--------SGVGNSFRMPIGIAIGSDGEMYIAD 609
>gi|340382761|ref|XP_003389886.1| PREDICTED: tripartite motif-containing protein 71-like [Amphimedon
queenslandica]
Length = 312
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 115/235 (48%), Gaps = 45/235 (19%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
G+AV DN +V+ +++ G GN + P +A++ ++VS
Sbjct: 106 GVAVTDDNHLVITENN-----------------GGSGNV--KFFSPRGVAITPDKFILVS 146
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNH 220
D NHR+Q +NG + S G G+ +L++P IA+S T +V ++D NH
Sbjct: 147 D--NHRIQKISMNGYLMAS-------VGEEGSGPLRLKYPAGIAISPITGQVYIADRGNH 197
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDS---------------- 264
+Q+ + + FGS+GS GQ PR +A+D QG + V D+
Sbjct: 198 CIQVLNPDLTFSHFFGSQGSANGQFLCPRDIAIDSQGLVYVTDNDNHHTAATGLVYVSEE 257
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GN+RI IFT DG F+R FG GS +F G+A +G++ VCD N R+ ++
Sbjct: 258 GNHRISIFTSDGGFVRKFGSKGSNIDQFDTPYGLAFDKDGSLYVCDFINSRLIIY 312
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 92/192 (47%), Gaps = 29/192 (15%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----------FTWPRGI 103
F PRG+A+ PD I+V+D NHR+Q + N +A +P GI
Sbjct: 129 FFSPRGVAITPDKFILVSD--NHRIQ------KISMNGYLMASVGEEGSGPLRLKYPAGI 180
Query: 104 AVGP-DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
A+ P + +AD NH +QV D TF FGS G+ GQ P IA+ + V V+D
Sbjct: 181 AISPITGQVYIADRGNHCIQVLNPDLTFSHFFGSQGSANGQFLCPRDIAIDSQGLVYVTD 240
Query: 163 SNNHRVQIFDV-------NGR--VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
++NH + N R +F SDG FV KFGS G+ Q + P+ +A +
Sbjct: 241 NDNHHTAATGLVYVSEEGNHRISIFTSDGGFVRKFGSKGSNIDQFDTPYGLAFDKDGSLY 300
Query: 214 VSDSNNHRVQIF 225
V D N R+ I+
Sbjct: 301 VCDFINSRLIIY 312
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 66/153 (43%), Gaps = 22/153 (14%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGP-DNSIVVADSSNHRVQVC-----FPHFDLKTNCVF 94
L +G GS P +P GIA+ P + +AD NH +QV F HF
Sbjct: 160 LMASVGEEGSGPLRLKYPAGIAISPITGQVYIADRGNHCIQVLNPDLTFSHFFGSQGSAN 219
Query: 95 LAFTWPRGIAVGPDNSIVVADSS----------------NHRVQVFQSDGTFVGKFGSMG 138
F PR IA+ + V D+ NHR+ +F SDG FV KFGS G
Sbjct: 220 GQFLCPRDIAIDSQGLVYVTDNDNHHTAATGLVYVSEEGNHRISIFTSDGGFVRKFGSKG 279
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
+ Q + P+ +A + V D N R+ I+
Sbjct: 280 SNIDQFDTPYGLAFDKDGSLYVCDFINSRLIIY 312
>gi|260832880|ref|XP_002611385.1| hypothetical protein BRAFLDRAFT_211026 [Branchiostoma floridae]
gi|229296756|gb|EEN67395.1| hypothetical protein BRAFLDRAFT_211026 [Branchiostoma floridae]
Length = 707
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 116/250 (46%), Gaps = 35/250 (14%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----- 95
L++++G G PG F GI V + VAD NHR+QV FD + N F
Sbjct: 453 LEYQLGGYGQSPGLFNQTGGIVVSRYGDMYVADQGNHRIQV----FDSRGNFKFQFGREG 508
Query: 96 ----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
+P +A+ PD +I V D N RVQ+F +G ++GKF S+ + G + I
Sbjct: 509 KFDGCLVYPNHLAITPDGNIAVNDPGNRRVQIFAPNGDYLGKF-SVAHIKGVKD----IT 563
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
VS+ +V+V D N V +F+ +G + Q + QL P IA + T
Sbjct: 564 VSHEGQVLVLDHNAKCVHVFNQHGNLLQKLDLY-----------KQLRLPTCIATTWTGD 612
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD-DQGYISVGDS-GNNRI 269
VIV+D N H ++IFD G + +G P + VD Q +++ S G I
Sbjct: 613 VIVADRNPHSIKIFDRRGNFLKQIPVKGFGYS----PVRLCVDAQQNLVALHHSYGYFHI 668
Query: 270 QIFTPDGQFL 279
+F PDG L
Sbjct: 669 TVFRPDGSTL 678
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 93/192 (48%), Gaps = 16/192 (8%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F GI V + VAD NHR+QVF S G F +FG G G L +P+++A++
Sbjct: 467 FNQTGGIVVSRYGDMYVADQGNHRIQVFDSRGNFKFQFGREGKFDGCLVYPNHLAITPDG 526
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ V+D N RVQIF N G ++GKF S+ + G + I VS+ +V+V D
Sbjct: 527 NIAVNDPGNRRVQIFAPN-------GDYLGKF-SVAHIKGVKD----ITVSHEGQVLVLD 574
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
N V +F+ +G ++ QL+ P +A G + V D + I+IF G
Sbjct: 575 HNAKCVHVFNQHGNLLQKLDL----YKQLRLPTCIATTWTGDVIVADRNPHSIKIFDRRG 630
Query: 277 QFLRAFGCWGSG 288
FL+ G G
Sbjct: 631 NFLKQIPVKGFG 642
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
+ G G G I VS + V+D NHR+Q+FD G FG EG +G L
Sbjct: 456 QLGGYGQSPGLFNQTGGIVVSRYGDMYVADQGNHRIQVFDSRGNFKFQFGREGKFDGCLV 515
Query: 247 FPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNI 306
+P +A+ G I+V D GN R+QIF P+G +L F KG++ + V G +
Sbjct: 516 YPNHLAITPDGNIAVNDPGNRRVQIFAPNGDYLGKFSV-----AHIKGVKDITVSHEGQV 570
Query: 307 LVCDRENHRIQVF 319
LV D + VF
Sbjct: 571 LVLDHNAKCVHVF 583
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
+ G G G I VS + V+D NHR+Q+FD S G F +FG G
Sbjct: 456 QLGGYGQSPGLFNQTGGIVVSRYGDMYVADQGNHRIQVFD-------SRGNFKFQFGREG 508
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
G L +P+++A++ + V+D N RVQIF NG + F +K + +
Sbjct: 509 KFDGCLVYPNHLAITPDGNIAVNDPGNRRVQIFAPNGDYLGKFSV-----AHIKGVKDIT 563
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRE 312
V +G + V D + +F G L+ + + + +A G+++V DR
Sbjct: 564 VSHEGQVLVLDHNAKCVHVFNQHGNLLQKLDLYK----QLRLPTCIATTWTGDVIVADRN 619
Query: 313 NHRIQVF 319
H I++F
Sbjct: 620 PHSIKIF 626
>gi|340385860|ref|XP_003391426.1| PREDICTED: tripartite motif-containing protein 71-like, partial
[Amphimedon queenslandica]
Length = 325
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 93/209 (44%), Gaps = 42/209 (20%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVA 114
F+ P G+A+ PD I+V+DS R+Q G + + +A
Sbjct: 1 FSSPHGLAITPDKFILVSDSD--RIQK----------------ISMDGYLIASAGQVYIA 42
Query: 115 DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 174
+ NHR+ V D TF FGS G+ GQ + P IA+ + V V+DS+NHR+Q
Sbjct: 43 NYGNHRILVLNPDLTFSHSFGSKGSANGQFQCPRDIAIDSQGLVYVTDSDNHRIQ----- 97
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
F DG FV I + T V VS+ NHR+ +F +G +
Sbjct: 98 --KFSPDGKFVA-----------------IDTAATGLVYVSEFGNHRISVFTSDGVFVRK 138
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
FGS GS Q PRG+A D G + V D
Sbjct: 139 FGSYGSNIDQFNVPRGLAFDKDGLLYVCD 167
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 103/222 (46%), Gaps = 51/222 (22%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F+ P G+A+ PD I+V+DS R+Q DG + G
Sbjct: 1 FSSPHGLAITPDKFILVSDSD--RIQKISMDGYLIASAG--------------------- 37
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+V +++ NHR+ V D TF FGS G+ GQ + P IA+ + V V+D
Sbjct: 38 QVYIANYGNHRI-------LVLNPDLTFSHSFGSKGSANGQFQCPRDIAIDSQGLVYVTD 90
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD--QGYISVGDSGNNRIQIFTP 274
S+NHR I F +G KF VA+D G + V + GN+RI +FT
Sbjct: 91 SDNHR----------IQKFSPDG------KF---VAIDTAATGLVYVSEFGNHRISVFTS 131
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
DG F+R FG +GS +F G+A +G + VCD + + +
Sbjct: 132 DGVFVRKFGSYGSNIDQFNVPRGLAFDKDGLLYVCDYKIYSL 173
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 23/119 (19%)
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
PH +A++ ++VSDS+ R+Q ++G +I S G +
Sbjct: 4 PHGLAITPDKFILVSDSD--RIQKISMDGYLIAS---------------------AGQVY 40
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ + GN+RI + PD F +FG GS +G+F+ +A+ S G + V D +NHRIQ F
Sbjct: 41 IANYGNHRILVLNPDLTFSHSFGSKGSANGQFQCPRDIAIDSQGLVYVTDSDNHRIQKF 99
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 56/121 (46%), Gaps = 20/121 (16%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAV 105
GS+GS G F PR IA+ + V DS NHR+Q F+ P G V
Sbjct: 63 GSKGSANGQFQCPRDIAIDSQGLVYVTDSDNHRIQ---------------KFS-PDGKFV 106
Query: 106 GPDNS----IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
D + + V++ NHR+ VF SDG FV KFGS G+ Q P +A + V
Sbjct: 107 AIDTAATGLVYVSEFGNHRISVFTSDGVFVRKFGSYGSNIDQFNVPRGLAFDKDGLLYVC 166
Query: 162 D 162
D
Sbjct: 167 D 167
>gi|290972902|ref|XP_002669189.1| predicted protein [Naegleria gruberi]
gi|284082733|gb|EFC36445.1| predicted protein [Naegleria gruberi]
Length = 536
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 38/228 (16%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIA-VSNTNRVIVSDSNNHRVQIFDV--------------- 173
++ FGS G+ GQ + P I +S + ++V+ NN +QIFD
Sbjct: 263 WINSFGSFGSADGQFDGPVDIKYLSRRDYLLVACYNNKNIQIFDAKTLEYKYQISTQSEI 322
Query: 174 ----------NGRVFQSDGTFVGK-----------FGSMGNKAGQLEHPHYIAVSNTNRV 212
N + D + V + +GS G K+ Q P + V R+
Sbjct: 323 RGMALDPTNDNSILISCDDSIVSRYTIMESWHVEMYGSKGCKSNQFNGPTGMVVDEEGRI 382
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V D N R+ + G+ + +FG +G+++GQ P + +D G + + DSG + IQ++
Sbjct: 383 FVCDCLNSRIVVLSKEGQFLYNFGEKGTKKGQFLMPWSITIDSFGNLLITDSGRHVIQVY 442
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAV-MSNGNILVCDRENHRIQVF 319
+P+G+ L G GS EF + + GN+L+CD N+RIQ+F
Sbjct: 443 SPNGEHLNEIGKKGSSKFEFNTPRAITIDQITGNVLICDEGNNRIQIF 490
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 27/227 (11%)
Query: 59 RGIAVGP--DNSIVVA--DSSNHRVQVCFP-HFDL--KTNCVFLAFTWPRGIAVGPDNSI 111
RG+A+ P DNSI+++ DS R + H ++ C F P G+ V + I
Sbjct: 323 RGMALDPTNDNSILISCDDSIVSRYTIMESWHVEMYGSKGCKSNQFNGPTGMVVDEEGRI 382
Query: 112 VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
V D N R+ V +G F+ FG G K GQ P I + + ++++DS H +Q++
Sbjct: 383 FVCDCLNSRIVVLSKEGQFLYNFGEKGTKKGQFLMPWSITIDSFGNLLITDSGRHVIQVY 442
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGR 230
NG + + G G+ + P I + T V++ D N+R+QIF+
Sbjct: 443 SPNGE-------HLNEIGKKGSSKFEFNTPRAITIDQITGNVLICDEGNNRIQIFN---- 491
Query: 231 VITSFGSEGSE--EGQLKFPRGVAVDDQG---YISVGDSGNNRIQIF 272
S +E + E +L P G+ +D Y+S D +N IQIF
Sbjct: 492 ---STLTEHVKIIEDRLHAPTGLTLDPTRALLYVSEWDLEHNFIQIF 535
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 18/139 (12%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------- 95
GS+G + F P G+ V + I V D N R+ V L FL
Sbjct: 359 GSKGCKSNQFNGPTGMVVDEEGRIFVCDCLNSRIVV------LSKEGQFLYNFGEKGTKK 412
Query: 96 -AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F P I + ++++ DS H +QV+ +G + + G G+ + P I +
Sbjct: 413 GQFLMPWSITIDSFGNLLITDSGRHVIQVYSPNGEHLNEIGKKGSSKFEFNTPRAITIDQ 472
Query: 155 -TNRVIVSDSNNHRVQIFD 172
T V++ D N+R+QIF+
Sbjct: 473 ITGNVLICDEGNNRIQIFN 491
>gi|260785262|ref|XP_002587681.1| hypothetical protein BRAFLDRAFT_92727 [Branchiostoma floridae]
gi|229272832|gb|EEN43692.1| hypothetical protein BRAFLDRAFT_92727 [Branchiostoma floridae]
Length = 445
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 139/291 (47%), Gaps = 40/291 (13%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT------ 98
G +G E G F P G V D I VAD N R+QV F L+ + T
Sbjct: 177 FGGKGQEEGLFNHPVGATVSDDGEIFVADYGNQRIQV----FTLQGEYLSQFPTVVSGEE 232
Query: 99 --WPRGIAVGPDNSIVV---ADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV- 152
+P +A+ + ++ V DS+ ++ + GT + KF + + +AV
Sbjct: 233 TMYPHDVAMDREGNLWVVGCTDSAGFGIK-YTRQGTVLTKFNL---QYTEWRRRSAVAVD 288
Query: 153 SNTNRVIVSDS----NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 208
+ N V+V+ + +N Q+ VF+SDGT ++G + G ++ P YI V
Sbjct: 289 TRRNHVLVTQTLGNKDNLHGQVL-----VFKSDGT---HLRTVGWEQG-MKVPCYIHVDG 339
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
+IVSD N+ + +F+ +G+ + +FG G+E GQL PRGV D+ G I V DSGN
Sbjct: 340 QGDIIVSDWGNNSIYVFNRDGQFLFNFGERGNEAGQLFLPRGVCTDEDGNIFVADSGNRL 399
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+++F DG+FL + K VA+ G+++V D + + VF
Sbjct: 400 VKMFDRDGRFLTLV-------AKTKEPWAVAMAMTGHLVVTDWGKNTVYVF 443
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+FG +G EEG P G V D G I V D GN RIQ+FT G++L F SG+ E
Sbjct: 176 TFGGKGQEEGLFNHPVGATVSDDGEIFVADYGNQRIQVFTLQGEYLSQFPTVVSGE-ETM 234
Query: 294 GLEGVAVMSNGNILV 308
VA+ GN+ V
Sbjct: 235 YPHDVAMDREGNLWV 249
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW--P 100
F G RG+E G PRG+ D +I VADS N V++ FD + L P
Sbjct: 364 FNFGERGNEAGQLFLPRGVCTDEDGNIFVADSGNRLVKM----FDRDGRFLTLVAKTKEP 419
Query: 101 RGIAVGPDNSIVVADSSNHRVQVF 124
+A+ +VV D + V VF
Sbjct: 420 WAVAMAMTGHLVVTDWGKNTVYVF 443
>gi|260822980|ref|XP_002603961.1| hypothetical protein BRAFLDRAFT_71751 [Branchiostoma floridae]
gi|229289286|gb|EEN59972.1| hypothetical protein BRAFLDRAFT_71751 [Branchiostoma floridae]
Length = 631
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 143/304 (47%), Gaps = 43/304 (14%)
Query: 32 RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN 91
R + Q ++ F G GSE G F P G+ V + I VADS N+R+QV F L+
Sbjct: 352 RQEEPQSEKVTF--GGEGSETGQFRDPLGVTVSDEGEIFVADSGNNRIQV----FTLQGA 405
Query: 92 CVFLAFT--------WPRGIAVGPDNSIVVA-----DSSNHRVQVFQSDGTFVGKFGSMG 138
V T +P +AV + ++ V +S++ VQ + G + KF
Sbjct: 406 FVRQFPTVVAGGRKMYPGNVAVDGERNLWVVGMTGPESADFAVQ-YNKQGRVLRKFDL-- 462
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSN---NHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA 195
K G EH + N ++++ + NH ++ VF+ DGT V ++G +
Sbjct: 463 QKIG--EHRGVAVDTRRNHILITQTTWDGNHHGEVL-----VFRPDGTLVR---TVGQQQ 512
Query: 196 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD 255
G +++P YI V ++VSD +NH V +++ +G+ FG EGS EGQL P G+ D
Sbjct: 513 G-MKYPWYITVDREGTILVSDISNHCVYVYNEDGQFPFQFGGEGSGEGQLGCPLGICTDR 571
Query: 256 QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHR 315
G I V D N +++F G+FL+ + K VA+ G ++V D N
Sbjct: 572 AGNIIVADYKNWYVEMFDKTGKFLKHI------TTDMKPY-AVAMAPQGQLVVTDTGNKT 624
Query: 316 IQVF 319
+ +F
Sbjct: 625 VSIF 628
>gi|219852554|ref|YP_002466986.1| carbohydrate binding family 6 [Methanosphaerula palustris E1-9c]
gi|219546813|gb|ACL17263.1| Carbohydrate binding family 6 [Methanosphaerula palustris E1-9c]
Length = 786
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 137/299 (45%), Gaps = 39/299 (13%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
LQ+ GS G P +AV S+ V+DS+NH+VQ ++ +F+
Sbjct: 43 LQWNGTEIGSLGGGLHAPGSVAVDDAGSVYVSDSANHQVQ------KFTSDGIFVKNWSN 96
Query: 97 -------FTWPRGIAVGPDNS-IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
F +P GIAV P + + V+D ++R+ F S+G FV ++ + G P+
Sbjct: 97 PVGNTGDFWYPVGIAVDPTGANVYVSDLESNRILKFTSNGDFVDEWNTSGGD------PY 150
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 208
+AV + V V++ N+ + V + F G + + G K +P +AV +
Sbjct: 151 GVAVDRSGHVFVAEVYNYEGGLGQV--QEFAPSGDLINNWSPGGKK-----NPLGVAVDS 203
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGS----EGSEEGQLKFPRGVAVDDQGYISVGDS 264
N V +S N+++++ F NG + ++G GS + P + VD + V D+
Sbjct: 204 NNNVYISYFNSNQIRKFTSNGTWLATWGRADGVHGSNATEFWAPTDIGVDGDDNVYVADT 263
Query: 265 GNNRIQIFTPDGQFLRAFGCW----GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NNRIQIF G L + G G G G F VAV S G + D N+RIQ F
Sbjct: 264 DNNRIQIFNAAGLPLGSLGNTAPHSGQGSGAFNRPSDVAVDSTGTVFAADTGNNRIQRF 322
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 26/186 (13%)
Query: 58 PRGIAVGPDNSIVVADSSNH-----RVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIV 112
P G+AV + VA+ N+ +VQ P DL N P G+AV +N++
Sbjct: 149 PYGVAVDRSGHVFVAEVYNYEGGLGQVQEFAPSGDLINNWSPGGKKNPLGVAVDSNNNVY 208
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSM----GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
++ ++++++ F S+GT++ +G G+ A + P I V + V V+D++N+R+
Sbjct: 209 ISYFNSNQIRKFTSNGTWLATWGRADGVHGSNATEFWAPTDIGVDGDDNVYVADTDNNRI 268
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKA-------GQLEHPHYIAVSNTNRVIVSDSNNHR 221
QIF+ G GS+GN A G P +AV +T V +D+ N+R
Sbjct: 269 QIFNAAGL----------PLGSLGNTAPHSGQGSGAFNRPSDVAVDSTGTVFAADTGNNR 318
Query: 222 VQIFDV 227
+Q F V
Sbjct: 319 IQRFGV 324
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 31/171 (18%)
Query: 51 EPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW----------- 99
PG P G+AV +N++ ++ ++++++ +N +LA TW
Sbjct: 189 SPGGKKNPLGVAVDSNNNVYISYFNSNQIR------KFTSNGTWLA-TWGRADGVHGSNA 241
Query: 100 -----PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ----LEHPHYI 150
P I V D+++ VAD+ N+R+Q+F + G +G G+ +GQ P +
Sbjct: 242 TEFWAPTDIGVDGDDNVYVADTDNNRIQIFNAAGLPLGSLGNTAPHSGQGSGAFNRPSDV 301
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP 201
AV +T V +D+ N+R+Q F G V T F ++G+ GQ +P
Sbjct: 302 AVDSTGTVFAADTGNNRIQRF---GVVRAPTPTISAGFYAIGH-IGQAPYP 348
>gi|440794644|gb|ELR15801.1| Bbox zinc finger domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 597
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 102/224 (45%), Gaps = 57/224 (25%)
Query: 100 PRGIAV-GPDNSIVVADSSNHRVQVFQSD-GTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+AV IVVAD RV V++SD G+ V F + G+ Q P +AV
Sbjct: 427 PWGVAVDAATGHIVVADFDGRRVHVWRSDDGSCVRSFLNHGSGPAQFRCPRGVAVDEEGH 486
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
+IV+D NHRVQ++ N DGT + FGS GN
Sbjct: 487 IIVADCFNHRVQVWRAN------DGTCLRIFGSEGN------------------------ 516
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ-GYISVGDSGNNRIQIFTPDG 276
+RV ++ +G I +FGS G GQ P GVAVD GY+ V D GN+R+Q
Sbjct: 517 --NRVHVWRTDGSFICTFGSAGRGYGQFMNPMGVAVDTTTGYVVVADYGNHRVQ------ 568
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAV-MSNGNILVCDRENHRIQVF 319
F G GVAV + GNI+V D N R+QV+
Sbjct: 569 ---------------FNGPAGVAVDAATGNIIVADSSNKRVQVW 597
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 85/178 (47%), Gaps = 31/178 (17%)
Query: 167 RVQIFDVNG--RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDSNNHRVQ 223
RV D G R + + FGS QL P +AV + T ++V+D + RV
Sbjct: 395 RVAATDAGGVVRDYAAMTAAQRTFGS----GAQLRCPWGVAVDAATGHIVVADFDGRRVH 450
Query: 224 IFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD------------------- 263
++ + G + SF + GS Q + PRGVAVD++G+I V D
Sbjct: 451 VWRSDDGSCVRSFLNHGSGPAQFRCPRGVAVDEEGHIIVADCFNHRVQVWRANDGTCLRI 510
Query: 264 ---SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV-MSNGNILVCDRENHRIQ 317
GNNR+ ++ DG F+ FG G G G+F GVAV + G ++V D NHR+Q
Sbjct: 511 FGSEGNNRVHVWRTDGSFICTFGSAGRGYGQFMNPMGVAVDTTTGYVVVADYGNHRVQ 568
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 84/181 (46%), Gaps = 54/181 (29%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPD 108
GS P F PRG+AV + I+VAD NHRVQV + N D
Sbjct: 467 GSGPAQFRCPRGVAVDEEGHIIVADCFNHRVQV------WRAN----------------D 504
Query: 109 NSI--VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDSNN 165
+ + N+RV V+++DG+F+ FGS G GQ +P +AV + T V+V+D N
Sbjct: 505 GTCLRIFGSEGNNRVHVWRTDGSFICTFGSAGRGYGQFMNPMGVAVDTTTGYVVVADYGN 564
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDSNNHRVQI 224
HRVQ NG P +AV + T +IV+DS+N RVQ+
Sbjct: 565 HRVQF---NG-------------------------PAGVAVDAATGNIIVADSSNKRVQV 596
Query: 225 F 225
+
Sbjct: 597 W 597
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 73/145 (50%), Gaps = 21/145 (14%)
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
F S+ T+V GS +G+LE RV +D+ V+ + +FG
Sbjct: 375 AFTSEDTWVQVVGS----SGRLE----------RRVAATDAGG-VVRDYAAMTAAQRTFG 419
Query: 237 SEGSEEGQLKFPRGVAVDDQ-GYISVGDSGNNRIQIF-TPDGQFLRAFGCWGSGDGEFKG 294
S QL+ P GVAVD G+I V D R+ ++ + DG +R+F GSG +F+
Sbjct: 420 SGA----QLRCPWGVAVDAATGHIVVADFDGRRVHVWRSDDGSCVRSFLNHGSGPAQFRC 475
Query: 295 LEGVAVMSNGNILVCDRENHRIQVF 319
GVAV G+I+V D NHR+QV+
Sbjct: 476 PRGVAVDEEGHIIVADCFNHRVQVW 500
>gi|260805102|ref|XP_002597426.1| hypothetical protein BRAFLDRAFT_80577 [Branchiostoma floridae]
gi|229282691|gb|EEN53438.1| hypothetical protein BRAFLDRAFT_80577 [Branchiostoma floridae]
Length = 800
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 56 TWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF-TWPRGIAVGPDNSIVVA 114
T P +AV D +IVV S + V+ P +L + T P G+A+ D +VVA
Sbjct: 584 TIPWSLAVHIDGTIVV--KSGNEVKKFTPSGELLYTFSLSEYCTEPYGLALQRDGRVVVA 641
Query: 115 DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 174
D H + +F+ DGT + + G G GQ P + N + +IVSD NHRV +FD N
Sbjct: 642 DGDKHSIFLFEPDGTLIKQVGGKGEGDGQFNDPCFACTDNADNIIVSDRLNHRVHVFDKN 701
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD--------SNNHRVQIFD 226
F KFG G++ + P ++ N +++S+ + ++Q++
Sbjct: 702 -------LMFQHKFGQRGDQTQDMRCPIGVSADNRENIVLSNIGCRTDGVKHGQKLQVYR 754
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+G +++ S+G +L P GVAV + G++ V D+ ++ I+ +
Sbjct: 755 PDGTWLSTISSDGD---KLNVPHGVAVTEDGHVFVADTNDHCIRKY 797
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 131 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQS---------- 180
V +FG G++ GQ P +AVS +R+ V+D+ N RVQ+FD+ G+ S
Sbjct: 531 VLRFGQKGSQQGQFNAPIDLAVSG-DRLYVTDTVNTRVQVFDLTGKYCHSFSTTTIPWSL 589
Query: 181 ----DGTFVGKFGSMGNK---AGQLEH----------PHYIAVSNTNRVIVSDSNNHRVQ 223
DGT V K G+ K +G+L + P+ +A+ RV+V+D + H +
Sbjct: 590 AVHIDGTIVVKSGNEVKKFTPSGELLYTFSLSEYCTEPYGLALQRDGRVVVADGDKHSIF 649
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
+F+ +G +I G +G +GQ P D+ I V D N+R+ +F + F FG
Sbjct: 650 LFEPDGTLIKQVGGKGEGDGQFNDPCFACTDNADNIIVSDRLNHRVHVFDKNLMFQHKFG 709
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILV 308
G + + GV+ + NI++
Sbjct: 710 QRGDQTQDMRCPIGVSADNRENIVL 734
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 79/169 (46%), Gaps = 35/169 (20%)
Query: 185 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS------- 237
V +FG G++ GQ P +AVS +R+ V+D+ N RVQ+FD+ G+ SF +
Sbjct: 531 VLRFGQKGSQQGQFNAPIDLAVSG-DRLYVTDTVNTRVQVFDLTGKYCHSFSTTTIPWSL 589
Query: 238 -----------EGSE------EGQLKF----------PRGVAVDDQGYISVGDSGNNRIQ 270
G+E G+L + P G+A+ G + V D + I
Sbjct: 590 AVHIDGTIVVKSGNEVKKFTPSGELLYTFSLSEYCTEPYGLALQRDGRVVVADGDKHSIF 649
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+F PDG ++ G G GDG+F + NI+V DR NHR+ VF
Sbjct: 650 LFEPDGTLIKQVGGKGEGDGQFNDPCFACTDNADNIIVSDRLNHRVHVF 698
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 28/147 (19%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRG- 102
++G +G G F P ++I+V+D NHRV V FD N +F RG
Sbjct: 660 QVGGKGEGDGQFNDPCFACTDNADNIIVSDRLNHRVHV----FD--KNLMFQHKFGQRGD 713
Query: 103 --------IAVGPDN--SIVVA------DSSNH--RVQVFQSDGTFVGKFGSMGNKAGQL 144
I V DN +IV++ D H ++QV++ DGT++ S G+K L
Sbjct: 714 QTQDMRCPIGVSADNRENIVLSNIGCRTDGVKHGQKLQVYRPDGTWLSTISSDGDK---L 770
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIF 171
PH +AV+ V V+D+N+H ++ +
Sbjct: 771 NVPHGVAVTEDGHVFVADTNDHCIRKY 797
>gi|340344605|ref|ZP_08667737.1| Fibronectin type III domain protein [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519746|gb|EGP93469.1| Fibronectin type III domain protein [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 919
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 145/339 (42%), Gaps = 69/339 (20%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPD-NSIVVADSSNHRVQV------------CFPHFD 87
FK G+ G+ P + V D SI V D+ NHR+ V F +
Sbjct: 8 FSFKFGTFGTANNQLKNPHDVDVSSDGRSIYVTDTDNHRIIVFDDDGDYDYKFGTFCNMT 67
Query: 88 LKTNCVFLA----------FTWP-RGIAVGPDNSIVVADSSNHRVQVFQS-DGTFVGKFG 135
NC A F P G+ G N V+ DS N RVQ F DG F KFG
Sbjct: 68 SIQNCNDDADGADNDGDGQFNNPFSGVLDGIGNFFVI-DSDNERVQRFDDGDGQFESKFG 126
Query: 136 SMGN-KAGQLEHPHYIAV-SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
S N K L IA+ +T ++ VS + +FD S GTFV F + N
Sbjct: 127 SSDNTKPEYLGSAQGIAIQKSTKKIFVSSIETDSISVFD-------SSGTFVTNFKTF-N 178
Query: 194 KAGQLEHPHYIAVSNTNRVI-VSDSNNHRVQIFD--------------VNGR-VITSFGS 237
L +P ++ + ++ + VSD+ N R+ F V+G I FGS
Sbjct: 179 GTQTLTNPSHMIIDDSEETLYVSDTGNDRIIAFKLVTGTTCPTGTTKAVDGICYIKKFGS 238
Query: 238 EGSEEGQLKFPRGVAVDDQG-YISVGDSGNNRIQIF--TPDGQ-------------FLRA 281
G+ +G+ P G+A+D + V D+ NNRIQIF T D F+
Sbjct: 239 AGTADGKFDSPSGLAIDSTNDLLYVADTDNNRIQIFKLTTDTTCASGTSKVVDGVCFVEK 298
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNIL-VCDRENHRIQVF 319
FG G+ DG+F G+A+ + N+L V D +N RIQ F
Sbjct: 299 FGSAGTADGKFDSPLGLALDTTHNLLYVADTDNSRIQAF 337
>gi|340378842|ref|XP_003387936.1| PREDICTED: tripartite motif-containing protein 71-like [Amphimedon
queenslandica]
Length = 283
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 88/176 (50%), Gaps = 35/176 (19%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F++P G+A+ PD I+++D SN R+Q FGS G+ GQ + PH IA+ +
Sbjct: 143 FSYPGGVAITPDKFILISDDSN-RIQKI--------TFGSEGSAYGQFQSPHDIAIDSQG 193
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
V V+D +NH +Q F DG F+G+F T V VS+
Sbjct: 194 LVYVTDGDNHHIQ-------KFSPDGDFLGQFA-------------------TGLVYVSE 227
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
NHR+ +F +G + FG EG+ Q P G+A D G + V DSGN+R+ ++
Sbjct: 228 GGNHRISVFTSDGVFVRKFGREGNNIDQFNNPYGLAFDKDGLLYVCDSGNDRLVVY 283
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 90/204 (44%), Gaps = 32/204 (15%)
Query: 24 IGQVGTTPRSQYLQKRRLQF--KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV 81
IG + T P Q + +++ G GS F++P G+A+ PD I+++D SN ++
Sbjct: 110 IGNIVTFPALQRYRVKKIDHITSAGEGGSGNVYFSYPGGVAITPDKFILISDDSNRIQKI 169
Query: 82 CFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKA 141
F + F P IA+ + V D NH +Q F DG F+G+F
Sbjct: 170 TFG----SEGSAYGQFQSPHDIAIDSQGLVYVTDGDNHHIQKFSPDGDFLGQFA------ 219
Query: 142 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP 201
T V VS+ NHR+ VF SDG FV KFG GN Q +P
Sbjct: 220 -------------TGLVYVSEGGNHRIS-------VFTSDGVFVRKFGREGNNIDQFNNP 259
Query: 202 HYIAVSNTNRVIVSDSNNHRVQIF 225
+ +A + V DS N R+ ++
Sbjct: 260 YGLAFDKDGLLYVCDSGNDRLVVY 283
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 35/176 (19%)
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
+P +A++ +++SD +N R+Q FGS G+ GQ + PH
Sbjct: 143 FSYPGGVAITPDKFILISDDSN-RIQKI---------------TFGSEGSAYGQFQSPHD 186
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
IA+ + V V+D +NH +Q F +G + F + G + V +
Sbjct: 187 IAIDSQGLVYVTDGDNHHIQKFSPDGDFLGQFAT-------------------GLVYVSE 227
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GN+RI +FT DG F+R FG G+ +F G+A +G + VCD N R+ V+
Sbjct: 228 GGNHRISVFTSDGVFVRKFGREGNNIDQFNNPYGLAFDKDGLLYVCDSGNDRLVVY 283
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
ITS G GS +P GVA+ +I + D +NRIQ T FG GS G+
Sbjct: 130 ITSAGEGGSGNVYFSYPGGVAITPDKFILISDD-SNRIQKIT--------FGSEGSAYGQ 180
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
F+ +A+ S G + V D +NH IQ F
Sbjct: 181 FQSPHDIAIDSQGLVYVTDGDNHHIQKF 208
>gi|94967777|ref|YP_589825.1| NHL repeat-containing protein [Candidatus Koribacter versatilis
Ellin345]
gi|94549827|gb|ABF39751.1| NHL repeat protein [Candidatus Koribacter versatilis Ellin345]
Length = 418
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 126/274 (45%), Gaps = 27/274 (9%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCF------PHFDLKTNCVFLAFTWPRGIAVGPDNSI 111
P G+AV + VAD +V F D+ N V F G+ + + +
Sbjct: 119 PYGMAVDSKGLLYVADG---KVGAIFIFNTETHDVDMIKNGVQAHFGLITGLTIDDGDRL 175
Query: 112 VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI-VSDSNNHRVQI 170
V+DS HRV VF D L P +AV N NR + V+D +V +
Sbjct: 176 FVSDSQLHRVLVFGPDRKQEAVISE------GLVDPGGMAVDNENRFLYVADPALDQVLV 229
Query: 171 FDVNGRVFQSDGTFVGKFGSMGN-----KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
+D + + K G+ G + GQ P +AV + + + V+D++N RV+IF
Sbjct: 230 YDADKF------NLIRKMGTSGKNHALTEPGQFARPTNVAVDSDSNLYVTDTSNRRVEIF 283
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
D +G+ IT++G G G P+G+A+D G++ V D+ +R+Q F+ DG+ L G
Sbjct: 284 DADGQFITAWGKAGDGPGTFARPKGIAIDSDGHVWVADAAQDRVQCFSKDGKVLLYLGGH 343
Query: 286 GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G F + G+ + + D+ R+Q+F
Sbjct: 344 GLLPGMFGNVAGLTIDKKNRVYTSDQNPGRVQMF 377
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 68/142 (47%), Gaps = 18/142 (12%)
Query: 44 KIGSRG-----SEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--- 95
K+G+ G +EPG F P +AV D+++ V D+SN RV++ FD +
Sbjct: 240 KMGTSGKNHALTEPGQFARPTNVAVDSDSNLYVTDTSNRRVEI----FDADGQFITAWGK 295
Query: 96 ------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
F P+GIA+ D + VAD++ RVQ F DG + G G G +
Sbjct: 296 AGDGPGTFARPKGIAIDSDGHVWVADAAQDRVQCFSKDGKVLLYLGGHGLLPGMFGNVAG 355
Query: 150 IAVSNTNRVIVSDSNNHRVQIF 171
+ + NRV SD N RVQ+F
Sbjct: 356 LTIDKKNRVYTSDQNPGRVQMF 377
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH------FDLKTNCVFLAFTW 99
G G PG F P+GIA+ D + VAD++ RVQ CF + + F
Sbjct: 294 GKAGDGPGTFARPKGIAIDSDGHVWVADAAQDRVQ-CFSKDGKVLLYLGGHGLLPGMFGN 352
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQ 125
G+ + N + +D + RVQ+FQ
Sbjct: 353 VAGLTIDKKNRVYTSDQNPGRVQMFQ 378
>gi|260812004|ref|XP_002600711.1| hypothetical protein BRAFLDRAFT_83452 [Branchiostoma floridae]
gi|229286000|gb|EEN56723.1| hypothetical protein BRAFLDRAFT_83452 [Branchiostoma floridae]
Length = 740
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 129/294 (43%), Gaps = 37/294 (12%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ------VCFPHFDLKT 90
++ R F G G EPG F P + V P N I V + N RVQ V HF
Sbjct: 470 ERWRNTFTFGEPGKEPGKFDNPYDVVVSPSNEIFVVEKGNKRVQVHDTEGVYLRHFPTLV 529
Query: 91 NCVFLAFTWPRGIAVGPDNSIV--VAD--SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH 146
P I++ +S V V D +NH V + DG + KF ++ +
Sbjct: 530 PGAEDGEMTPHDISIDDSDSTVWVVGDDGKANHHVVQYSKDGIAMRKFS-----LPRIRY 584
Query: 147 PHYIAVSNTNR-VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
IAV + +R ++V++++ + G + +A + P +
Sbjct: 585 YRGIAVDSRSRHILVTEAD--------------RGHGVPPRRLAGEEVRASRNAVPSVLT 630
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG 265
V +VSD V +D +G+ + FG G +GQL+FPRGV D QG+I V DS
Sbjct: 631 VDLDGNAVVSDCATDSVYKYDGSGKFLLRFGGRGCGKGQLRFPRGVCTDSQGHIIVADSS 690
Query: 266 NNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
N R+QIFT G+++ G++GVAV G +++ + ++ + +F
Sbjct: 691 NCRVQIFTSRGEYVCHVDTGA-------GIQGVAVGPEGQLVLTNWDDDTVTIF 737
>gi|301629939|ref|XP_002944089.1| PREDICTED: hypothetical protein LOC100497041, partial [Xenopus
(Silurana) tropicalis]
Length = 1012
Score = 96.7 bits (239), Expect = 1e-17, Method: Composition-based stats.
Identities = 58/162 (35%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
+ GS G G+ + I+ S NR++V+DSNN +Q VF +DG F +FG G
Sbjct: 530 RVGSRGRDKGEFSNLQGISASCNNRIVVADSNNQCIQ-------VFTNDGQFKLRFGVRG 582
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
GQL+ P +AV +IV+D +N V IF G+ G G+L P+GVA
Sbjct: 583 RSPGQLQRPTGVAVDMNGDIIVADYDNRWVSIFSPEGKFKNKIGV-----GRLMGPKGVA 637
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
VD G++ V D+ + I IF +G+ + FG G GD + G
Sbjct: 638 VDRNGHLIVVDNKSCCIFIFQSNGKLVGRFGARGPGDKQQPG 679
Score = 93.6 bits (231), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
+ GS G G+ + I+ S NR++V+DSNN +Q+F +G+ FG G GQL+
Sbjct: 530 RVGSRGRDKGEFSNLQGISASCNNRIVVADSNNQCIQVFTNDGQFKLRFGVRGRSPGQLQ 589
Query: 247 FPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNI 306
P GVAVD G I V D N + IF+P+G+F G G G +GVAV NG++
Sbjct: 590 RPTGVAVDMNGDIIVADYDNRWVSIFSPEGKFKNKIGV-----GRLMGPKGVAVDRNGHL 644
Query: 307 LVCDRENHRIQVF 319
+V D ++ I +F
Sbjct: 645 IVVDNKSCCIFIF 657
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 12/148 (8%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F+ +GI+ +N IVVADS+N +QVF +DG F +FG G GQL+ P +AV
Sbjct: 541 FSNLQGISASCNNRIVVADSNNQCIQVFTNDGQFKLRFGVRGRSPGQLQRPTGVAVDMNG 600
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+IV+D +N V I F +G F K G G+L P +AV +IV D
Sbjct: 601 DIIVADYDNRWVSI-------FSPEGKFKNKIG-----VGRLMGPKGVAVDRNGHLIVVD 648
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQ 244
+ + + IF NG+++ FG+ G + Q
Sbjct: 649 NKSCCIFIFQSNGKLVGRFGARGPGDKQ 676
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 60/177 (33%), Positives = 87/177 (49%), Gaps = 21/177 (11%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLKTNCVFLA---F 97
++GSRG + G F+ +GI+ +N IVVADS+N +QV F L+ +
Sbjct: 529 LRVGSRGRDKGEFSNLQGISASCNNRIVVADSNNQCIQVFTNDGQFKLRFGVRGRSPGQL 588
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P G+AV + I+VAD N V +F +G F K G G+L P +AV
Sbjct: 589 QRPTGVAVDMNGDIIVADYDNRWVSIFSPEGKFKNKIG-----VGRLMGPKGVAVDRNGH 643
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV D N IF +FQS+G VG+FG+ G G + P A+ NR ++
Sbjct: 644 LIVVD--NKSCCIF-----IFQSNGKLVGRFGARG--PGDKQQPG--ALDGNNRRMI 689
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ +I GS G ++G+ +G++ I V DS N IQ+FT DGQF FG G
Sbjct: 523 IEDEMILRVGSRGRDKGEFSNLQGISASCNNRIVVADSNNQCIQVFTNDGQFKLRFGVRG 582
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV NG+I+V D +N + +F
Sbjct: 583 RSPGQLQRPTGVAVDMNGDIIVADYDNRWVSIF 615
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 42 QFKI--GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
QFK+ G RG PG P G+AV + I+VAD N V + P K
Sbjct: 573 QFKLRFGVRGRSPGQLQRPTGVAVDMNGDIIVADYDNRWVSIFSPEGKFKNKIGVGRLMG 632
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + ++V D+ + + +FQS+G VG+FG+ G G + P A+ NR +
Sbjct: 633 PKGVAVDRNGHLIVVDNKSCCIFIFQSNGKLVGRFGARG--PGDKQQPG--ALDGNNRRM 688
Query: 160 V 160
+
Sbjct: 689 I 689
>gi|427735439|ref|YP_007054983.1| PEP-CTERM putative exosortase interaction domain-containing protein
[Rivularia sp. PCC 7116]
gi|427370480|gb|AFY54436.1| PEP-CTERM putative exosortase interaction domain-containing protein
[Rivularia sp. PCC 7116]
Length = 385
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 95/178 (53%), Gaps = 11/178 (6%)
Query: 110 SIVVADSSNHRVQVFQSD-GTFVGKFGSM-GNKAGQLEH-PHYIAVSNTNRVIVSDSNNH 166
++ V D N + V+ D G FV FGS G AG + P + + V+D +
Sbjct: 122 NLYVGDVFNSEIDVYNPDSGEFVTSFGSFSGQGAGDIFFGPGGMDFDKQGNLHVTDFSGD 181
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSNNHRVQIF 225
V+++ GR DG V +GS+G + GQ + P IA+SNT + ++D N+R+Q+
Sbjct: 182 VVKVY---GR----DGELVKTYGSLGTEPGQFDGPAGIAISNTTGNIYLNDQFNNRIQVL 234
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
D + +FG+EG+ GQ P G+ VD+Q I V DS NNR+Q+F DG L FG
Sbjct: 235 DSEQNFLYAFGTEGTAPGQFNEPIGIDVDEQDNIYVADSQNNRVQVFDKDGNLLTIFG 292
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 11/206 (5%)
Query: 119 HRVQVFQSDGTFVGKFGSMGN-KAGQLEHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGR 176
+RV VF DG ++ G+ K L+ P + T + V D N + +++ +
Sbjct: 82 NRVDVFSPDGEYLRAIGTGAQGKGAGLDEPADLKFDPITGNLYVGDVFNSEIDVYNPD-- 139
Query: 177 VFQSDGTFVGKFGSM-GNKAGQLEH-PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
G FV FGS G AG + P + + V+D + V+++ +G ++ +
Sbjct: 140 ----SGEFVTSFGSFSGQGAGDIFFGPGGMDFDKQGNLHVTDFSGDVVKVYGRDGELVKT 195
Query: 235 FGSEGSEEGQLKFPRGVAVDDQ-GYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+GS G+E GQ P G+A+ + G I + D NNRIQ+ + FL AFG G+ G+F
Sbjct: 196 YGSLGTEPGQFDGPAGIAISNTTGNIYLNDQFNNRIQVLDSEQNFLYAFGTEGTAPGQFN 255
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ V NI V D +N+R+QVF
Sbjct: 256 EPIGIDVDEQDNIYVADSQNNRVQVF 281
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 28/201 (13%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G+ ++ V D S V+V+ DG V +GS+G + GQ + P IA+SNT
Sbjct: 159 FFGPGGMDFDKQGNLHVTDFSGDVVKVYGRDGELVKTYGSLGTEPGQFDGPAGIAISNTT 218
Query: 157 -RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+ ++D N+R+Q+ D S+ F+ FG+ G GQ P I V + + V+
Sbjct: 219 GNIYLNDQFNNRIQVLD-------SEQNFLYAFGTEGTAPGQFNEPIGIDVDEQDNIYVA 271
Query: 216 DSNNHRVQIFDVNGRVITSFGS-------------------EGSEEGQLKFPRGVAVDDQ 256
DS N+RVQ+FD +G ++T FG E G+ + G++ +D
Sbjct: 272 DSQNNRVQVFDKDGNLLTIFGEAVENAGPPAPGELPFATNPADLEPGKFNWSGGLSYNDN 331
Query: 257 GYISVGDSGNNRIQIFTPDGQ 277
+ VGD R+Q+ +G+
Sbjct: 332 -KLYVGDFFTGRVQVLNVEGK 351
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 97 FTWPRGIAVG-PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GIA+ +I + D N+R+QV S+ F+ FG+ G GQ P I V
Sbjct: 206 FDGPAGIAISNTTGNIYLNDQFNNRIQVLDSEQNFLYAFGTEGTAPGQFNEPIGIDVDEQ 265
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG-------SMGNKAGQLEHPHYI---- 204
+ + V+DS N+RVQ+FD +G + G V G LE +
Sbjct: 266 DNIYVADSQNNRVQVFDKDGNLLTIFGEAVENAGPPAPGELPFATNPADLEPGKFNWSGG 325
Query: 205 AVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
N N++ V D RVQ+ +V G+ + +
Sbjct: 326 LSYNDNKLYVGDFFTGRVQVLNVEGKKVAT 355
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 74/170 (43%), Gaps = 32/170 (18%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVG-PDNSIVVADSSNHRVQVCFPHFDLKTNCV 93
Y + L GS G+EPG F P GIA+ +I + D N+R+QV D + N +
Sbjct: 186 YGRDGELVKTYGSLGTEPGQFDGPAGIAISNTTGNIYLNDQFNNRIQVL----DSEQNFL 241
Query: 94 FL---------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQL 144
+ F P GI V ++I VADS N+RVQVF DG + FG AG
Sbjct: 242 YAFGTEGTAPGQFNEPIGIDVDEQDNIYVADSQNNRVQVFDKDGNLLTIFGEAVENAGPP 301
Query: 145 ---EHPHYIAVS---------------NTNRVIVSDSNNHRVQIFDVNGR 176
E P + N N++ V D RVQ+ +V G+
Sbjct: 302 APGELPFATNPADLEPGKFNWSGGLSYNDNKLYVGDFFTGRVQVLNVEGK 351
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 47/104 (45%), Gaps = 20/104 (19%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDD----------QGYISVGDSG----NNRIQIFTPDGQFL 279
S G G GQL P+GV D +GY D+ NR+ +F+PDG++L
Sbjct: 35 SIGEPGFAPGQLFVPQGVGERDATGNIYVSNGRGYDPTTDTFLPNVGNRVDVFSPDGEYL 94
Query: 280 RAFGCWGSGDGEFKGLEGVAVMS----NGNILVCDRENHRIQVF 319
RA G G G GL+ A + GN+ V D N I V+
Sbjct: 95 RAIGTGAQGKG--AGLDEPADLKFDPITGNLYVGDVFNSEIDVY 136
>gi|392965583|ref|ZP_10331002.1| Tripartite motif-containing protein 71 AltName: Full=Lin-41 homolog
[Fibrisoma limi BUZ 3]
gi|387844647|emb|CCH53048.1| Tripartite motif-containing protein 71 AltName: Full=Lin-41 homolog
[Fibrisoma limi BUZ 3]
Length = 929
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 132/293 (45%), Gaps = 31/293 (10%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL------------KTNCVFLA 96
GS P ++P G+ V ++ V D+SN R+Q P N +F
Sbjct: 50 GSAPNQLSFPGGLFVDSSGNVYVVDTSNDRIQKWAPGASAGVTVAGGNGEGSAPNQLFS- 108
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG----QLEHPHYIAV 152
P G+ V ++ VAD+SN+R+Q + + G VG + GN G QL P + V
Sbjct: 109 ---PYGVFVDMLGNVYVADASNNRIQRW-APGASVGVTVAGGNGEGSAPNQLNFPTGLFV 164
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
+ V V+D+ NHR+Q + + GT V +G+ QL P+ + V V
Sbjct: 165 DGSGNVYVADNFNHRIQKWGPGA----TSGTTVAGGNGLGSAPNQLLSPNGLFVDGAGNV 220
Query: 213 IVSDSNNHRVQIFD---VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
V+D+ N R+Q + ++G + GS QL FP GV VD G + V D N RI
Sbjct: 221 YVADTGNDRIQKWAPGALSGTTVAGGNGAGSALNQLDFPTGVFVDVSGNVYVADYDNYRI 280
Query: 270 QIFTP---DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
Q + P G + GS + GV + GN+ V ++ NHRIQ F
Sbjct: 281 QRWAPGAGTGVTVAGGNGQGSAPNQLNRPSGVFMDGAGNVYVSEQFNHRIQRF 333
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 114/248 (45%), Gaps = 32/248 (12%)
Query: 48 RGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA----------- 96
GS P P G+ V ++ VAD+SN+R+Q P + V +A
Sbjct: 99 EGSAPNQLFSPYGVFVDMLGNVYVADASNNRIQRWAPGASVG---VTVAGGNGEGSAPNQ 155
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVF---QSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
+P G+ V ++ VAD+ NHR+Q + + GT V +G+ QL P+ + V
Sbjct: 156 LNFPTGLFVDGSGNVYVADNFNHRIQKWGPGATSGTTVAGGNGLGSAPNQLLSPNGLFVD 215
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAG----QLEHPHYIAVSNT 209
V V+D+ N R+Q + + G G + GN AG QL+ P + V +
Sbjct: 216 GAGNVYVADTGNDRIQKW--------APGALSGTTVAGGNGAGSALNQLDFPTGVFVDVS 267
Query: 210 NRVIVSDSNNHRVQIFDV---NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
V V+D +N+R+Q + G + +GS QL P GV +D G + V + N
Sbjct: 268 GNVYVADYDNYRIQRWAPGAGTGVTVAGGNGQGSAPNQLNRPSGVFMDGAGNVYVSEQFN 327
Query: 267 NRIQIFTP 274
+RIQ F+P
Sbjct: 328 HRIQRFSP 335
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 92/200 (46%), Gaps = 10/200 (5%)
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGT 183
F +GT V +G+ QL P + V ++ V V D++N R+Q + S G
Sbjct: 36 FCPNGTTVAGGNGIGSAPNQLSFPGGLFVDSSGNVYVVDTSNDRIQKWAPGA----SAGV 91
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV-ITSFGS--EGS 240
V G+ QL P+ + V V V+D++N+R+Q + V +T G EGS
Sbjct: 92 TVAGGNGEGSAPNQLFSPYGVFVDMLGNVYVADASNNRIQRWAPGASVGVTVAGGNGEGS 151
Query: 241 EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP---DGQFLRAFGCWGSGDGEFKGLEG 297
QL FP G+ VD G + V D+ N+RIQ + P G + GS + G
Sbjct: 152 APNQLNFPTGLFVDGSGNVYVADNFNHRIQKWGPGATSGTTVAGGNGLGSAPNQLLSPNG 211
Query: 298 VAVMSNGNILVCDRENHRIQ 317
+ V GN+ V D N RIQ
Sbjct: 212 LFVDGAGNVYVADTGNDRIQ 231
>gi|290982604|ref|XP_002674020.1| predicted protein [Naegleria gruberi]
gi|284087607|gb|EFC41276.1| predicted protein [Naegleria gruberi]
Length = 499
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 117/242 (48%), Gaps = 14/242 (5%)
Query: 38 KRRLQFKIGSRGSE--PGCFTWPRGIAVGP-DNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
+R F++G+R + ++PR + V D+SI+ N+ + + L +
Sbjct: 229 RRIAVFELGTRQFKFHISLSSYPRCLVVSEVDDSIIFTCDDNYVYKYSYDGSKLIWKS-Y 287
Query: 95 LAFTWPRGIAVGPDNS-IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
W RG+ + N I + D NHR+ V +G F+ FGS G+ Q + P I
Sbjct: 288 PNLNWARGLVIDTTNEDIYICDFDNHRIVVLSKNGDFLRDFGSKGSGDTQFDGPKDIDFD 347
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGS-MGNKAGQLEHPHYIAVSNTN-R 211
++VSD NHR+ + + +G+ + K + GN+ GQ + TN
Sbjct: 348 LDGNLVVSDRENHRILVLS------KLNGSLIRKIENGHGNQPGQFACQEGFCIDRTNGN 401
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ-GYISVGDSGNNRIQ 270
+IV DS N R+QIF+ + ITSFG G E+ +L P G A+D++ + V + N R+Q
Sbjct: 402 IIVCDSMNDRIQIFNSKLQFITSFGEAGIEKSELTKPTGCALDEKRQELLVVEWNNQRLQ 461
Query: 271 IF 272
+F
Sbjct: 462 VF 463
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 128/288 (44%), Gaps = 37/288 (12%)
Query: 47 SRGSEPGCFTWPRGIAVGPDNSI-VVADSSNHRVQVCFPHFDLKTNCVFLAFT---WPRG 102
S S+ F +P + + + +I V D+ N R+ V F+L T + +PR
Sbjct: 198 SETSKDSSFAYPLDVTLYHERNIFYVTDTYNRRIAV----FELGTRQFKFHISLSSYPRC 253
Query: 103 IAVGP-DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY-----IAVSNTN 156
+ V D+SI+ F D +V K+ G+K +P+ + + TN
Sbjct: 254 LVVSEVDDSII-----------FTCDDNYVYKYSYDGSKLIWKSYPNLNWARGLVIDTTN 302
Query: 157 R-VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+ + D +NHR+ + NG F+ FGS G+ Q + P I ++VS
Sbjct: 303 EDIYICDFDNHRIVVLSKNG-------DFLRDFGSKGSGDTQFDGPKDIDFDLDGNLVVS 355
Query: 216 DSNNHRVQIF-DVNGRVITSFGS-EGSEEGQLKFPRGVAVD-DQGYISVGDSGNNRIQIF 272
D NHR+ + +NG +I + G++ GQ G +D G I V DS N+RIQIF
Sbjct: 356 DRENHRILVLSKLNGSLIRKIENGHGNQPGQFACQEGFCIDRTNGNIIVCDSMNDRIQIF 415
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAV-MSNGNILVCDRENHRIQVF 319
QF+ +FG G E G A+ +LV + N R+QVF
Sbjct: 416 NSKLQFITSFGEAGIEKSELTKPTGCALDEKRQELLVVEWNNQRLQVF 463
>gi|291222677|ref|XP_002731342.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 618
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 114/232 (49%), Gaps = 25/232 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G+ + +VVADS N RVQ+ G K + G+ P +A+S N
Sbjct: 372 FNRPIGVKLSTSGDVVVADSMNRRVQILDIQGNL--KLMIQFSGYGKPVQPIDVALSADN 429
Query: 157 RVIVSD-------SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
V+D + N++V I D +G+VF+ + L +P IAV+ T
Sbjct: 430 TYFVTDGSWRTDRAGNYQVIICDQHGKVFRCICS------------KDLRNPCGIAVNET 477
Query: 210 NRVI-VSDSNNHRVQIFDVNGRV-ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
V+ V D H ++++D+ + I S G +G+ + + FP +A++ +G + V D+GNN
Sbjct: 478 VDVLCVVDRFAHCIRLYDMAEFLCIKSIGKKGNGQCEFLFPCFIAINSKGCMIVSDAGNN 537
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
RIQ+ G FL F G + F GVA N NI VCD N+R+Q+F
Sbjct: 538 RIQVLNSHGSFLFEFN--GIQNNSFDQPNGVATDKNDNIYVCDTSNNRVQMF 587
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 127/272 (46%), Gaps = 33/272 (12%)
Query: 33 SQYLQKRR---LQFKIGS------RGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF 83
+Q KRR L K+G+ + PG F P G+ + +VVADS N RVQ+
Sbjct: 341 TQKPSKRRQSYLPLKLGTILGKKTESNSPGFFNRPIGVKLSTSGDVVVADSMNRRVQILD 400
Query: 84 PHFDLKTNCVFLAF---TWPRGIAVGPDNSIVVADSS-------NHRVQVFQSDGTFVGK 133
+LK F + P +A+ DN+ V D S N++V + G
Sbjct: 401 IQGNLKLMIQFSGYGKPVQPIDVALSADNTYFVTDGSWRTDRAGNYQVIICDQHGKV--- 457
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVI-VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
F + +K L +P IAV+ T V+ V D H ++++D+ ++ + G G
Sbjct: 458 FRCICSK--DLRNPCGIAVNETVDVLCVVDRFAHCIRLYDM------AEFLCIKSIGKKG 509
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
N + P +IA+++ +IVSD+ N+R+Q+ + +G + F G + P GVA
Sbjct: 510 NGQCEFLFPCFIAINSKGCMIVSDAGNNRIQVLNSHGSFLFEFN--GIQNNSFDQPNGVA 567
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFLRAFGC 284
D I V D+ NNR+Q+F G+F+ C
Sbjct: 568 TDKNDNIYVCDTSNNRVQMFNSQGEFVTNIVC 599
>gi|171060803|ref|YP_001793152.1| NHL repeat-containing protein [Leptothrix cholodnii SP-6]
gi|170778248|gb|ACB36387.1| NHL repeat containing protein [Leptothrix cholodnii SP-6]
Length = 368
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 102/228 (44%), Gaps = 17/228 (7%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RV 158
P G+ V ++ VAD + V+ DG + + G +L + V RV
Sbjct: 130 PIGLDVDAAGNLYVADIGARAILVYGPDGRYQRRIGGGAQSFVRLAS---VTVDPAGARV 186
Query: 159 IVSD-----SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
D S+ HRV++FD G + G G GQ P +A+ R+
Sbjct: 187 YAVDLGGVSSDQHRVRVFDAR------SGAHLSDIGQRGTGPGQFNLPRDMAIGRDGRLY 240
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
V D N RV +FD GR + SFGS G + GQ P+ VA+D G + V D+ QIF+
Sbjct: 241 VVDGGNFRVVVFDAEGRYLRSFGSVGKQYGQFARPKEVAIDRDGNVYVVDTAFGNFQIFS 300
Query: 274 PDGQFLRAFGCWGSGDGEFKGL--EGVAVMSNGNILVCDRENHRIQVF 319
PDG+ L G D + + G+AV +G + V D+ +I VF
Sbjct: 301 PDGELLMFVGERSERDSPARYMLPSGIAVDEDGRVYVVDQWFRKIDVF 348
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 102/242 (42%), Gaps = 19/242 (7%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLKTNCVFLAFTWPR 101
+IG E G P G+ V ++ VAD + V P + + +F
Sbjct: 117 RIGDEEGE-GQLIKPIGLDVDAAGNLYVADIGARAILVYGPDGRYQRRIGGGAQSFVRLA 175
Query: 102 GIAVGPDNSIVVA------DSSNHRVQVFQS-DGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
+ V P + V A S HRV+VF + G + G G GQ P +A+
Sbjct: 176 SVTVDPAGARVYAVDLGGVSSDQHRVRVFDARSGAHLSDIGQRGTGPGQFNLPRDMAIGR 235
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
R+ V D N RV +FD GR +S FGS+G + GQ P +A+ V V
Sbjct: 236 DGRLYVVDGGNFRVVVFDAEGRYLRS-------FGSVGKQYGQFARPKEVAIDRDGNVYV 288
Query: 215 SDSNNHRVQIFDVNGRVITSFG--SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
D+ QIF +G ++ G SE + P G+AVD+ G + V D +I +F
Sbjct: 289 VDTAFGNFQIFSPDGELLMFVGERSERDSPARYMLPSGIAVDEDGRVYVVDQWFRKIDVF 348
Query: 273 TP 274
P
Sbjct: 349 RP 350
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 44/219 (20%)
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDV-------------NGRVFQSDGTFVGKFGS 190
L P+ +AV R+ VSD+ + V++FDV G++ + G V G+
Sbjct: 82 LAKPYAVAVWR-GRIFVSDTVSRFVRVFDVPQGSHARIGDEEGEGQLIKPIGLDVDAAGN 140
Query: 191 M-----GNKAGQLEHPH-------------YIAVSNTN------RVIVSD-----SNNHR 221
+ G +A + P ++ +++ RV D S+ HR
Sbjct: 141 LYVADIGARAILVYGPDGRYQRRIGGGAQSFVRLASVTVDPAGARVYAVDLGGVSSDQHR 200
Query: 222 VQIFDV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
V++FD +G ++ G G+ GQ PR +A+ G + V D GN R+ +F +G++LR
Sbjct: 201 VRVFDARSGAHLSDIGQRGTGPGQFNLPRDMAIGRDGRLYVVDGGNFRVVVFDAEGRYLR 260
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+FG G G+F + VA+ +GN+ V D Q+F
Sbjct: 261 SFGSVGKQYGQFARPKEVAIDRDGNVYVVDTAFGNFQIF 299
>gi|383789205|ref|YP_005473774.1| hypothetical protein CSE_15450 [Caldisericum exile AZM16c01]
gi|381364842|dbj|BAL81671.1| hypothetical protein CSE_15450 [Caldisericum exile AZM16c01]
Length = 1075
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 120/269 (44%), Gaps = 33/269 (12%)
Query: 59 RGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF-----TWPRGIAVGPDNSIVV 113
+G+ PD ++VV D+S RV V + L + +P +AV D + +
Sbjct: 69 QGMTSTPDGNLVVLDTSYGRVHVLDKNLYNILTFGKLGYGEGKLQYPVDVAVDKDGNFYI 128
Query: 114 ADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 173
AD N+ F +G ++ G+ G+ GQ P IAV ++ V VSD N R+Q+FD
Sbjct: 129 ADFFNNYFAKFDKNGKWIFNVGTEGSGNGQFNGPSGIAVDSSGNVYVSDQLNGRIQVFDT 188
Query: 174 NGR---VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
NG V Q+D + P + V + N + V D + V D G+
Sbjct: 189 NGNFKAVLQTD----------------VVAPGGMCVDSLNNLYVVDMRSSVVYKLDSTGK 232
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR-----IQIFTPDGQFLRAFGCW 285
+ FGS G+ + Q +P ++VD QG I V D G +Q F G+FL FG
Sbjct: 233 TLLKFGSAGTNDEQFVYPFDISVDKQGNIYVLDRGLGSKKHACVQKFDSTGKFLMKFGDN 292
Query: 286 GSG----DGEFKGLEGVAVMSNGNILVCD 310
+ +G F G AV NGN+ V D
Sbjct: 293 ATKIPQPNGTFLTPGGFAVDDNGNVFVID 321
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 13/211 (6%)
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
+G+ PD ++VV D+S RV V + + FG +G G+L++P +AV +
Sbjct: 69 QGMTSTPDGNLVVLDTSYGRVHVLDKNLYNILTFGKLGYGEGKLQYPVDVAVDKDGNFYI 128
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+D N+ FD NG+ ++ G+ G+ GQ P IAV ++ V VSD N
Sbjct: 129 ADFFNNYFAKFDKNGK-------WIFNVGTEGSGNGQFNGPSGIAVDSSGNVYVSDQLNG 181
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+Q+FD NG + + + P G+ VD + V D ++ + G+ L
Sbjct: 182 RIQVFDTNGNF------KAVLQTDVVAPGGMCVDSLNNLYVVDMRSSVVYKLDSTGKTLL 235
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDR 311
FG G+ D +F ++V GNI V DR
Sbjct: 236 KFGSAGTNDEQFVYPFDISVDKQGNIYVLDR 266
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 129/308 (41%), Gaps = 47/308 (15%)
Query: 33 SQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC 92
+++ + + F +G+ GS G F P GIAV ++ V+D N R+QV FD TN
Sbjct: 137 AKFDKNGKWIFNVGTEGSGNGQFNGPSGIAVDSSGNVYVSDQLNGRIQV----FD--TNG 190
Query: 93 VFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHP 147
F A P G+ V N++ V D + V S G + KFGS G Q +P
Sbjct: 191 NFKAVLQTDVVAPGGMCVDSLNNLYVVDMRSSVVYKLDSTGKTLLKFGSAGTNDEQFVYP 250
Query: 148 HYIAVSNTNRVIVSD----SNNHR-VQIFDVNGRVFQSDGTFVGKFGSMGNKA----GQL 198
I+V + V D S H VQ FD S G F+ KFG K G
Sbjct: 251 FDISVDKQGNIYVLDRGLGSKKHACVQKFD-------STGKFLMKFGDNATKIPQPNGTF 303
Query: 199 EHPHYIAVSNTNRVIVSDSNNH-------------RVQIFDVNGRVITSFGSEGSEEGQL 245
P AV + V V DS R+ FD G + S +G+L
Sbjct: 304 LTPGGFAVDDNGNVFVIDSGYFYNPGNPFGYPVGIRLTQFDSKGNFVRKVDFNESTKGRL 363
Query: 246 KFPRGVAVDDQGYISVGDSGN----NRIQIFTPDGQFLRAFGCWGSGDGE-FKGLEGVAV 300
P D +G I V N + IFTPDG+F++A G D E FK + G+A
Sbjct: 364 INPWAACEDSKGNIWVTSWTNFNDVGEVDIFTPDGKFIKAIK--GISDKEPFKAIGGIAS 421
Query: 301 MSNGNILV 308
NG+I V
Sbjct: 422 DHNGSIYV 429
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 65/108 (60%)
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
++V D++ RV + D N I +FG G EG+L++P VAVD G + D NN
Sbjct: 79 LVVLDTSYGRVHVLDKNLYNILTFGKLGYGEGKLQYPVDVAVDKDGNFYIADFFNNYFAK 138
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F +G+++ G GSG+G+F G G+AV S+GN+ V D+ N RIQVF
Sbjct: 139 FDKNGKWIFNVGTEGSGNGQFNGPSGIAVDSSGNVYVSDQLNGRIQVF 186
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 111/299 (37%), Gaps = 48/299 (16%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--------- 96
G G G +P +AV D + +AD N+ F FD +F
Sbjct: 103 GKLGYGEGKLQYPVDVAVDKDGNFYIADFFNNY----FAKFDKNGKWIFNVGTEGSGNGQ 158
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P GIAV ++ V+D N R+QVF ++G F + + P + V + N
Sbjct: 159 FNGPSGIAVDSSGNVYVSDQLNGRIQVFDTNGNFKAVLQT------DVVAPGGMCVDSLN 212
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ V D + V D G+ KFGS G Q +P I+V + V D
Sbjct: 213 NLYVVDMRSSVVYKLDSTGKTLL-------KFGSAGTNDEQFVYPFDISVDKQGNIYVLD 265
Query: 217 ----SNNHR-VQIFDVNGRVITSFGSEGSE----EGQLKFPRGVAVDDQGYISVGDSG-- 265
S H VQ FD G+ + FG ++ G P G AVDD G + V DSG
Sbjct: 266 RGLGSKKHACVQKFDSTGKFLMKFGDNATKIPQPNGTFLTPGGFAVDDNGNVFVIDSGYF 325
Query: 266 -----------NNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
R+ F G F+R S G S GNI V N
Sbjct: 326 YNPGNPFGYPVGIRLTQFDSKGNFVRKVDFNESTKGRLINPWAACEDSKGNIWVTSWTN 384
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 24/200 (12%)
Query: 116 SSNHRVQVFQSDGTFVGKFGSMGN-----KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
+S+H ++ G +V KF N G++ + +AV ++ + V+ + V
Sbjct: 420 ASDHNGSIYVGLGDYVAKFDENFNFVTKIGVGKVSNVFGVAVDSSQNIWVASNGTQTVV- 478
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
F+SDGT + +F P + V ++ +++++V ++D + +
Sbjct: 479 ------GFKSDGTLLSQFSPA-------HAPVGLYVDKNGNFYITTTDDNKVYVYDSSQK 525
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
+ SFG G G+ P GV VD+ G I V D+ N R+Q F D F S +
Sbjct: 526 LKGSFGGGGRSTGKFWVPYGVVVDNSGNIIVADTENGRLQAFKGD-----TFDLLWSTER 580
Query: 291 EFKGLEGVAVMSNGNILVCD 310
EF +++ +G ILV D
Sbjct: 581 EFYEPAMLSLTKDGKILVAD 600
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 128/345 (37%), Gaps = 74/345 (21%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSS-NHRVQVCFPHFDLKTNCVFL--- 95
+ K GS G+ F +P I+V +I V D + C FD + FL
Sbjct: 232 KTLLKFGSAGTNDEQFVYPFDISVDKQGNIYVLDRGLGSKKHACVQKFD--STGKFLMKF 289
Query: 96 ------------AFTWPRGIAVGPDNSIVVADSSNH-------------RVQVFQSDGTF 130
F P G AV + ++ V DS R+ F S G F
Sbjct: 290 GDNATKIPQPNGTFLTPGGFAVDDNGNVFVIDSGYFYNPGNPFGYPVGIRLTQFDSKGNF 349
Query: 131 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH----RVQIF--------------- 171
V K + G+L +P + + V+ N V IF
Sbjct: 350 VRKVDFNESTKGRLINPWAACEDSKGNIWVTSWTNFNDVGEVDIFTPDGKFIKAIKGISD 409
Query: 172 ------------DVNGRVFQSDGTFVGKFGSMGN-----KAGQLEHPHYIAVSNTNRVIV 214
D NG ++ G +V KF N G++ + +AV ++ + V
Sbjct: 410 KEPFKAIGGIASDHNGSIYVGLGDYVAKFDENFNFVTKIGVGKVSNVFGVAVDSSQNIWV 469
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ + V F +G +++ F + P G+ VD G + + +N++ ++
Sbjct: 470 ASNGTQTVVGFKSDGTLLSQFSPAHA-------PVGLYVDKNGNFYITTTDDNKVYVYDS 522
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ +FG G G+F GV V ++GNI+V D EN R+Q F
Sbjct: 523 SQKLKGSFGGGGRSTGKFWVPYGVVVDNSGNIIVADTENGRLQAF 567
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH---YIAVSNTNRV 158
G+AV +I VA + V F+SDGT + +F G + YI ++ N+V
Sbjct: 458 GVAVDSSQNIWVASNGTQTVVGFKSDGTLLSQFSPAHAPVGLYVDKNGNFYITTTDDNKV 517
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
V DS+ G FG G G+ P+ + V N+ +IV+D+
Sbjct: 518 YVYDSSQK-----------------LKGSFGGGGRSTGKFWVPYGVVVDNSGNIIVADTE 560
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
N R+Q F + +F S E + P +++ G I V D +N ++I +
Sbjct: 561 NGRLQAFKGD-----TFDLLWSTEREFYEPAMLSLTKDGKILVADCFHNVVRILS 610
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ V + + + + +++V V+ S G FG G G+ P+ + V N+ +I
Sbjct: 496 PVGLYVDKNGNFYITTTDDNKVYVYDSSQKLKGSFGGGGRSTGKFWVPYGVVVDNSGNII 555
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ N R+Q F+ D F + + + P ++++ +++V+D +
Sbjct: 556 VADTENGRLQ-------AFKGD-----TFDLLWSTEREFYEPAMLSLTKDGKILVADCFH 603
Query: 220 HRVQIFDVNGRVITSF 235
+ V+I ++ F
Sbjct: 604 NVVRILSETAPQVSQF 619
>gi|260818134|ref|XP_002603939.1| hypothetical protein BRAFLDRAFT_102380 [Branchiostoma floridae]
gi|229289264|gb|EEN59950.1| hypothetical protein BRAFLDRAFT_102380 [Branchiostoma floridae]
Length = 714
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 47/227 (20%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS-------MG----------- 138
+P G+ V + + VA N+ +QVF GTFV +F + MG
Sbjct: 197 LDYPYGVTVSDEGEVFVASRWNNEIQVFTLQGTFVRQFQTVTSGGLKMGPEDVAMDGEGN 256
Query: 139 ----------------NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR------ 176
NK G + + +S R + D+ + + I G
Sbjct: 257 LWVVGMTDYGQVPLQYNKQGSVLGTFDLKLSRWVRGVALDTRRNHILITQTTGDKDDKHG 316
Query: 177 ---VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT 233
VF+ DGT V ++G + G ++HP YI V ++VSD + H V +++ +G+ +
Sbjct: 317 EVLVFRPDGTLVR---TVGQQQG-MKHPWYITVDGEGNILVSDYDGHCVYMYNEDGQFLF 372
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
FG EGS EGQLK PRG+ D G I V D+GN R+++F G+FL+
Sbjct: 373 QFGGEGSGEGQLKGPRGICTDRSGNIIVSDTGNRRVEMFDKTGKFLK 419
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
++ +FG+ GS GQL +P GV V D+G + V NN IQ+FT G F+R F SG G
Sbjct: 184 LVITFGN-GSGTGQLDYPYGVTVSDEGEVFVASRWNNEIQVFTLQGTFVRQFQTVTSG-G 241
Query: 291 EFKGLEGVAVMSNGNILV 308
G E VA+ GN+ V
Sbjct: 242 LKMGPEDVAMDGEGNLWV 259
>gi|260812231|ref|XP_002600824.1| hypothetical protein BRAFLDRAFT_75885 [Branchiostoma floridae]
gi|229286114|gb|EEN56836.1| hypothetical protein BRAFLDRAFT_75885 [Branchiostoma floridae]
Length = 662
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 134/286 (46%), Gaps = 31/286 (10%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+L +G G G F +P + + IVV D N R+Q + K V LAF
Sbjct: 400 KLLKTVGDEGRGDGQFEYPTSLCLTAGGDIVVTDRDNRRLQFLDKNGSFKKK-VELAFK- 457
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY---IAVSNTN 156
P +AV P+ ++V HR+ V G+ + G +E IAV +
Sbjct: 458 PLCLAVLPNGDLLVT-GDEHRIHVLDKHS---GRESRVIQVTGAVEKATVTQGIAVDSLG 513
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
R+IV+ Q+F V G + K G G GQ + + V+++N++I+SD
Sbjct: 514 RIIVTIG----YQVF-----VLHPSGDVILKLGDKGQ--GQ-QQSLRVTVNSSNQIIISD 561
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+NH ++I D GR + + GS G GQL P V D + I V D GN+R+ +F+ DG
Sbjct: 562 WDNHILKILDPAGRHLFTCGSHGRGPGQLNVPYCVITDSEDSIIVADCGNSRVSVFSLDG 621
Query: 277 QFLRAFGCWGSGDGEFKGL---EGVAVMSNGNILVCDRENHRIQVF 319
F+R E GL G+ + ++G+++V DR H +++F
Sbjct: 622 TFIR-----NVLTREEHGLNYPTGLTLTNDGHLVVSDR--HSVKMF 660
>gi|260825373|ref|XP_002607641.1| hypothetical protein BRAFLDRAFT_84670 [Branchiostoma floridae]
gi|229292989|gb|EEN63651.1| hypothetical protein BRAFLDRAFT_84670 [Branchiostoma floridae]
Length = 798
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 47/260 (18%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS-MGNKAGQLEHPHYIAVS-N 154
FT P G+ V DN + +AD N R+Q+F DG +V +F + + + G+ P +AV N
Sbjct: 538 FTCPSGVVVSQDNEVYIADWGNTRIQMFTMDGVYVREFTTTLPGETGKKVKPWDVAVDRN 597
Query: 155 TNRVIVSDSN------------------------------NHRVQIFDVNG-----RVFQ 179
N +V D + ++ + + +G RVF
Sbjct: 598 DNLWVVGDDHVVQYSREGTCLVEIDLPFVETGRGITVSMATEQILVTEYDGKDGRLRVFD 657
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
DG+ + +GS G+++ + P +AV ++V+DSNNH V D FGS+
Sbjct: 658 QDGSEMDTYGS-GHRSPEPWWPCCVAVDGEGNILVTDSNNHCVHFLDREENFKFKFGSDK 716
Query: 240 SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVA 299
S QLK+P+G+ V+ G I V D GN +++F +G+FL GSG GVA
Sbjct: 717 S---QLKYPQGICVNGMGNIIVADIGNGCVKMFDSEGRFLCHI---GSG---MVSPYGVA 767
Query: 300 VMSNGNILVCDRENHRIQVF 319
V G+++V D ++H + V+
Sbjct: 768 VSPGGDVVVTDFKDHTVSVW 787
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 118/284 (41%), Gaps = 68/284 (23%)
Query: 39 RRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-------------CFP- 84
R++ F G GS G FT P G+ V DN + +AD N R+Q+ P
Sbjct: 524 RKVSF--GGEGSGRGEFTCPSGVVVSQDNEVYIADWGNTRIQMFTMDGVYVREFTTTLPG 581
Query: 85 ----------------------------HFDLKTNCVF---LAFTWP-RGIAVGPDNSIV 112
+ + C+ L F RGI V +
Sbjct: 582 ETGKKVKPWDVAVDRNDNLWVVGDDHVVQYSREGTCLVEIDLPFVETGRGITVSMATEQI 641
Query: 113 VA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 169
+ D + R++VF DG+ + +GS G+++ + P +AV ++V+DSNNH V
Sbjct: 642 LVTEYDGKDGRLRVFDQDGSEMDTYGS-GHRSPEPWWPCCVAVDGEGNILVTDSNNHCVH 700
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
D + F KFGS QL++P I V+ +IV+D N V++FD G
Sbjct: 701 FLD-------REENFKFKFGS---DKSQLKYPQGICVNGMGNIIVADIGNGCVKMFDSEG 750
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
R + GS + P GVAV G + V D ++ + ++T
Sbjct: 751 RFLCHIGS------GMVSPYGVAVSPGGDVVVTDFKDHTVSVWT 788
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD-GEF 292
SFG EGS G+ P GV V + + D GN RIQ+FT DG ++R F G+ G+
Sbjct: 527 SFGGEGSGRGEFTCPSGVVVSQDNEVYIADWGNTRIQMFTMDGVYVREFTTTLPGETGKK 586
Query: 293 KGLEGVAVMSNGNILVCDRENHRIQ 317
VAV N N+ V ++H +Q
Sbjct: 587 VKPWDVAVDRNDNLWVVG-DDHVVQ 610
>gi|260785676|ref|XP_002587886.1| hypothetical protein BRAFLDRAFT_87273 [Branchiostoma floridae]
gi|229273041|gb|EEN43897.1| hypothetical protein BRAFLDRAFT_87273 [Branchiostoma floridae]
Length = 392
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 142/306 (46%), Gaps = 35/306 (11%)
Query: 22 SGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV 81
G G + + Q +R+ F G GS G F P G+ V + I VAD N R+QV
Sbjct: 106 KGTGHLHCNQKQGEPQSQRVTF--GGEGSGTGQFDGPSGVTVSDEGEIFVADYGNQRIQV 163
Query: 82 CFPHFDLK-TNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNK 140
F L+ T+ A P G + P + + + N V + F ++ NK
Sbjct: 164 ----FTLQGTSKRQFAAVVPGGEKINP-HDVAMDGEGNLWVVGWTESAHFAVQY----NK 214
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG----------RVFQSDGTFVGKFGS 190
G++ + + R + D+ + + I V VF+ DG V +
Sbjct: 215 QGRVLRKFDLQKTGFARGVAVDTRRNHILITQVTEDLDSYLHGAVLVFRPDGRLVK---T 271
Query: 191 MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRG 250
+G + G + +P Y+ V+ ++VSD + V +++ +G+ + FG+EGS EGQL +PRG
Sbjct: 272 VGRQQG-MGYPWYMTVNGEGNILVSDRS---VYVYNEDGQFLFQFGAEGSGEGQLSYPRG 327
Query: 251 VAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
+ D G + V D N R+++F G+FL+ + D E+ VA+ +G ++V +
Sbjct: 328 ICTDRAGNVIVADQNNKRVEMFDKTGKFLKHI----TIDMEYPC--AVAMTKHGQLIVTN 381
Query: 311 RENHRI 316
NH++
Sbjct: 382 ELNHKV 387
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 18/227 (7%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G+ V + I VAD N R+QVF GT +F ++ G+ +PH +A+
Sbjct: 137 FDGPSGVTVSDEGEIFVADYGNQRIQVFTLQGTSKRQFAAV-VPGGEKINPHDVAMDGEG 195
Query: 157 RVIV---SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+ V ++S + VQ ++ GRV + + K G A H + T +
Sbjct: 196 NLWVVGWTESAHFAVQ-YNKQGRVLRKFD--LQKTGFARGVAVDTRRNHILITQVTEDL- 251
Query: 214 VSDSNNH-RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
DS H V +F +GR++ + G + + +P + V+ +G I V D + ++
Sbjct: 252 --DSYLHGAVLVFRPDGRLVKTVGRQQG----MGYPWYMTVNGEGNILVSDRS---VYVY 302
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
DGQFL FG GSG+G+ G+ GN++V D+ N R+++F
Sbjct: 303 NEDGQFLFQFGAEGSGEGQLSYPRGICTDRAGNVIVADQNNKRVEMF 349
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 16/129 (12%)
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P + V + +I+V+D S V V+ DG F+ +FG+ G+ GQL +P I V
Sbjct: 280 YPWYMTVNGEGNILVSDRS---VYVYNEDGQFLFQFGAEGSGEGQLSYPRGICTDRAGNV 336
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
IV+D NN RV++FD G+ + + +E+P +A++ ++IV++
Sbjct: 337 IVADQNNKRVEMFDKTGKFLK-------------HITIDMEYPCAVAMTKHGQLIVTNEL 383
Query: 219 NHRVQIFDV 227
NH+V I +
Sbjct: 384 NHKVFILHL 392
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
++PRGI +++VAD +N RV++F G F+ +E+P +A++
Sbjct: 322 LSYPRGICTDRAGNVIVADQNNKRVEMFDKTGKFLKHI------TIDMEYPCAVAMTKHG 375
Query: 157 RVIVSDSNNHRVQIFDV 173
++IV++ NH+V I +
Sbjct: 376 QLIVTNELNHKVFILHL 392
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 22/39 (56%)
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GSG G+F G GV V G I V D N RIQVF
Sbjct: 126 TFGGEGSGTGQFDGPSGVTVSDEGEIFVADYGNQRIQVF 164
>gi|391325620|ref|XP_003737329.1| PREDICTED: B-box type zinc finger protein ncl-1-like [Metaseiulus
occidentalis]
Length = 1063
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 111/259 (42%), Gaps = 44/259 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNT 155
F+ P G +GP+ IVVAD++NHR+Q+F G F +FG G + GQL +P +AV +T
Sbjct: 807 FSSPHGFCLGPNQEIVVADTNNHRIQIFDKAGEFKHEFGVQGKEEGQLWYPRKVAVIKST 866
Query: 156 NRVIVSDSNNH--RVQIFD----------------VNGRVFQSDGTFV------------ 185
++ D N R+Q+F V G SDG V
Sbjct: 867 GTYVICDRGNERSRMQLFTKTGEFIKKIAIRYIDIVAGLALTSDGRIVAVDSVSPTVFVI 926
Query: 186 ---GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
G + +G + P IAV + + D H V ++ G + G E
Sbjct: 927 AEGGDLLLWFDCSGHMREPSDIAVWGS-EFYICDFKGHCVVVYSECGNYLRKIGG----E 981
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNR--IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
G FP G+ + D G I VGDS NR I +F DGQ + F C GL+ +
Sbjct: 982 GLTNFPNGIDISDHGDILVGDSHGNRFHIVVFNRDGQAVSEFECPYCKVSRCCGLK---I 1038
Query: 301 MSNGNILVCDRENHRIQVF 319
S G ++ + NH + +
Sbjct: 1039 TSEGYVVTLAKNNHHVLIL 1057
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 8/127 (6%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
KFG +G+ Q PH + ++V+D+NNHR+QIFD G FG +G EEGQL
Sbjct: 796 KFGQLGSGQTQFSSPHGFCLGPNQEIVVADTNNHRIQIFDKAGEFKHEFGVQGKEEGQLW 855
Query: 247 FPRGVAV-DDQGYISVGDSGN--NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
+PR VAV G + D GN +R+Q+FT G+F++ + G+A+ S+
Sbjct: 856 YPRKVAVIKSTGTYVICDRGNERSRMQLFTKTGEFIKKIAIR-----YIDIVAGLALTSD 910
Query: 304 GNILVCD 310
G I+ D
Sbjct: 911 GRIVAVD 917
>gi|407801334|ref|ZP_11148178.1| PKD domain-containing protein [Alcanivorax sp. W11-5]
gi|407024771|gb|EKE36514.1| PKD domain-containing protein [Alcanivorax sp. W11-5]
Length = 1447
Score = 95.9 bits (237), Expect = 2e-17, Method: Composition-based stats.
Identities = 80/281 (28%), Positives = 128/281 (45%), Gaps = 33/281 (11%)
Query: 58 PRGIAV-GPDNSIVVADSSNHRVQVC----FP------HFDLKTNCVFLA-FTWPRGIAV 105
P G+AV +++AD+ NHR++ FP F + F P+G+AV
Sbjct: 35 PTGMAVDAARERLLIADTGNHRIRYTRLADFPGPYTWHEFGYNADAAAAGAFREPQGVAV 94
Query: 106 GPDNSIVVADSSNHRVQVFQSDG-----TFVGKFGSMGNKAG--QLEHPHYIAVSNTNRV 158
D ++ V D+ + +VQ+F+ D + F S G + P IAV+ V
Sbjct: 95 DADGNVFVVDALSGQVQLFRYDSGADSYSHDAAFASAGTTVDGRAILMPRDIAVAEDGSV 154
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+ DS N+RV + D D V + G+ N +P+ + V+ T + ++D+
Sbjct: 155 YLLDSGNNRVLVADNA----DDDSWAVWREGTDWN------NPYGLDVTATGDLWLADTG 204
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
N RV G T+FG G+ Q ++PR VAV D G + V D+ N+RI + G F
Sbjct: 205 NSRVLRLPAGGGAQTAFGHFGTGSAQFRYPRDVAVGDDGRVYVADTDNHRIVVLEDTGAF 264
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
R G G F L+ + + G +LV D HR+ ++
Sbjct: 265 YRHLG----GAPLFDALQKIVLDGEGRVLVLDATEHRVVMY 301
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 118/268 (44%), Gaps = 36/268 (13%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQV--------CFPH----FDLKTNCVFLAFTWPRG 102
F P+G+AV D ++ V D+ + +VQ+ + H T A PR
Sbjct: 86 FREPQGVAVDADGNVFVVDALSGQVQLFRYDSGADSYSHDAAFASAGTTVDGRAILMPRD 145
Query: 103 IAVGPDNSIVVADSSNHRVQVFQS---DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
IAV D S+ + DS N+RV V + D V + G+ N +P+ + V+ T +
Sbjct: 146 IAVAEDGSVYLLDSGNNRVLVADNADDDSWAVWREGTDWN------NPYGLDVTATGDLW 199
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
++D+ N RV G + FG G + Q +P +AV + RV V+D++N
Sbjct: 200 LADTGNSRVLRLPAGGGAQTA-------FGHFGTGSAQFRYPRDVAVGDDGRVYVADTDN 252
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
HR+ + + G G + K + +D +G + V D+ +R+ ++ P +
Sbjct: 253 HRIVVLEDTGAFYRHLGGAPLFDALQK----IVLDGEGRVLVLDATEHRVVMY-PGAGYT 307
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
F + ++ G EGV +G +L
Sbjct: 308 PPFDAYVR---DYVGDEGVQPSDDGYLL 332
Score = 40.8 bits (94), Expect = 0.88, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA----- 96
Q G G+ F +PR +AVG D + VAD+ NHR+ V L+ F
Sbjct: 218 QTAFGHFGTGSAQFRYPRDVAVGDDGRVYVADTDNHRIVV------LEDTGAFYRHLGGA 271
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDG 128
F + I + + ++V D++ HRV ++ G
Sbjct: 272 PLFDALQKIVLDGEGRVLVLDATEHRVVMYPGAG 305
>gi|149175023|ref|ZP_01853646.1| hypothetical protein PM8797T_25126 [Planctomyces maris DSM 8797]
gi|148846001|gb|EDL60341.1| hypothetical protein PM8797T_25126 [Planctomyces maris DSM 8797]
Length = 303
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 97/220 (44%), Gaps = 24/220 (10%)
Query: 60 GIAVGPDNSIVVADSSNHRVQVCFPHFDL--------KTNCVFLAFTWPRGIAVGPDNSI 111
G+ V PD +I V D NH V P L K F P IA GP
Sbjct: 94 GLRVAPDETIWVTDIGNHMVFQFNPEGKLLLALGQAGKPGDSQDQFNKPTDIAFGPQGEF 153
Query: 112 VVADS-SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
++D N RV F ++G +G++G+ G G+ PH I V RV+V D N RVQI
Sbjct: 154 YISDGYGNSRVMKFAANGKNLGQWGTPGKGPGEFNLPHSILVDAKGRVLVGDRENDRVQI 213
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
FD+ G + + F P+ + + + V+D ++V + +G+
Sbjct: 214 FDLEGNLLEIWTGFA---------------PYGMEFDSRGNLFVADGRANKVLQLNASGK 258
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
V S+G G E G+ P +AVD G + V + G R+Q
Sbjct: 259 VENSWGKTGKEPGEYNLPHMLAVDAAGNLFVTEIGGKRLQ 298
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 99/223 (44%), Gaps = 25/223 (11%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFV---GKFGSMGNKAGQLEHPHYIAVSNTNRV 158
G+ V PD +I V D NH V F +G + G+ G G+ Q P IA
Sbjct: 94 GLRVAPDETIWVTDIGNHMVFQFNPEGKLLLALGQAGKPGDSQDQFNKPTDIAFGPQGEF 153
Query: 159 IVSDS-NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
+SD N RV F NG+ +G++G+ G G+ PH I V RV+V D
Sbjct: 154 YISDGYGNSRVMKFAANGKN-------LGQWGTPGKGPGEFNLPHSILVDAKGRVLVGDR 206
Query: 218 NNHRVQIFDVNGRVI---TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
N RVQIFD+ G ++ T F P G+ D +G + V D N++
Sbjct: 207 ENDRVQIFDLEGNLLEIWTGFA-----------PYGMEFDSRGNLFVADGRANKVLQLNA 255
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
G+ ++G G GE+ +AV + GN+ V + R+Q
Sbjct: 256 SGKVENSWGKTGKEPGEYNLPHMLAVDAAGNLFVTEIGGKRLQ 298
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 100/230 (43%), Gaps = 29/230 (12%)
Query: 100 PRGIAVGPDNSIVVADSSN-----HR----VQVFQSDGTFVGKFGSMGNKAGQLEHPHYI 150
P G+A+GP S V DS HR + F G FV +G + H +
Sbjct: 42 PEGLALGP-CSAVDFDSKGRMYLFHRGPQPILCFDQSGKFVRSWGDK-----LISQAHGL 95
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
V+ + V+D NH V F+ G++ + +G+ G G+ Q P IA
Sbjct: 96 RVAPDETIWVTDIGNHMVFQFNPEGKLLLA----LGQAGKPGDSQDQFNKPTDIAFGPQG 151
Query: 211 RVIVSDS-NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
+SD N RV F NG+ + +G+ G G+ P + VD +G + VGD N+R+
Sbjct: 152 EFYISDGYGNSRVMKFAANGKNLGQWGTPGKGPGEFNLPHSILVDAKGRVLVGDRENDRV 211
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD-RENHRIQV 318
QIF +G L + + EF S GN+ V D R N +Q+
Sbjct: 212 QIFDLEGNLLEIWTGFAPYGMEFD--------SRGNLFVADGRANKVLQL 253
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG- 236
F G FV +G + H + V+ + V+D NH V F+ G+++ + G
Sbjct: 74 FDQSGKFVRSWGDK-----LISQAHGLRVAPDETIWVTDIGNHMVFQFNPEGKLLLALGQ 128
Query: 237 --SEGSEEGQLKFPRGVAVDDQGYISVGDS-GNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
G + Q P +A QG + D GN+R+ F +G+ L +G G G GEF
Sbjct: 129 AGKPGDSQDQFNKPTDIAFGPQGEFYISDGYGNSRVMKFAANGKNLGQWGTPGKGPGEFN 188
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
+ V + G +LV DREN R+Q+F
Sbjct: 189 LPHSILVDAKGRVLVGDRENDRVQIF 214
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC--VFLAFTWPRGI 103
G+ G PG F P I V ++V D N RVQ+ FDL+ N ++ F P G+
Sbjct: 178 GTPGKGPGEFNLPHSILVDAKGRVLVGDRENDRVQI----FDLEGNLLEIWTGFA-PYGM 232
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 163
++ VAD ++V + G +G G + G+ PH +AV + V++
Sbjct: 233 EFDSRGNLFVADGRANKVLQLNASGKVENSWGKTGKEPGEYNLPHMLAVDAAGNLFVTEI 292
Query: 164 NNHRVQ 169
R+Q
Sbjct: 293 GGKRLQ 298
>gi|340378918|ref|XP_003387974.1| PREDICTED: tripartite motif-containing protein 2-like [Amphimedon
queenslandica]
Length = 694
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
GIAV + I + + VQVF DGT V + GS G+ GQ ++P + + +R+ VS
Sbjct: 473 GIAVHTNGEIFAGNCIDGFVQVFSEDGTAVRRIGSKGDGNGQFKYPWGLLLVG-DRLYVS 531
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
D HRVQ F + ++G+FGS GN GQL P ++ ++V+D++N R
Sbjct: 532 DYKLHRVQYFSA------TTSQYIGQFGSFGNGNGQLSSPFGMSTDGKGNILVADNSNKR 585
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
VQ+F +G + +G+ VAVD++G I V S N +Q+F+PDG
Sbjct: 586 VQVFKEDGTFVQVIQCDGN-------ATDVAVDNEGKIHVTISNPNHVQVFSPDG 633
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 45/213 (21%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGT-FVGKFGSMGNKAGQLEHPHYIAVSNT 155
F +P G+ + D + V+D HRVQ F + + ++G+FGS GN GQL P ++
Sbjct: 515 FKYPWGLLLVGDR-LYVSDYKLHRVQYFSATTSQYIGQFGSFGNGNGQLSSPFGMSTDGK 573
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
++V+D++N RVQ VF+ DGTFV GN +AV N ++ V+
Sbjct: 574 GNILVADNSNKRVQ-------VFKEDGTFVQVIQCDGNATD-------VAVDNEGKIHVT 619
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
SN + VQ+F P G+A+DD+GYI V N + + +PD
Sbjct: 620 ISNPNHVQVFS---------------------PDGIAIDDEGYIFVS-CNNGCLHVLSPD 657
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
+ ++ G D G+A+ +GNI V
Sbjct: 658 RKQVKLIS--GLSDP-----VGMALDKDGNIYV 683
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 176 RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD-VNGRVITS 234
+VF DGT V + GS G+ GQ ++P + + +R+ VSD HRVQ F + I
Sbjct: 493 QVFSEDGTAVRRIGSKGDGNGQFKYPWGLLLVG-DRLYVSDYKLHRVQYFSATTSQYIGQ 551
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
FGS G+ GQL P G++ D +G I V D+ N R+Q+F DG F++ C G+
Sbjct: 552 FGSFGNGNGQLSSPFGMSTDGKGNILVADNSNKRVQVFKEDGTFVQVIQCDGNA------ 605
Query: 295 LEGVAVMSNGNILVCDRENHRIQVF 319
VAV + G I V + +QVF
Sbjct: 606 -TDVAVDNEGKIHVTISNPNHVQVF 629
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 102/239 (42%), Gaps = 58/239 (24%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF------ 97
+IGS+G G F +P G+ + D + V+D HRVQ +F T+ F
Sbjct: 504 RIGSKGDGNGQFKYPWGLLLVGDR-LYVSDYKLHRVQ----YFSATTSQYIGQFGSFGNG 558
Query: 98 ----TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
+ P G++ +I+VAD+SN RVQVF+ DGTFV GN +AV
Sbjct: 559 NGQLSSPFGMSTDGKGNILVADNSNKRVQVFKEDGTFVQVIQCDGNATD-------VAVD 611
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
N ++ V+ SN + VQ+F +G +G YI VS N +
Sbjct: 612 NEGKIHVTISNPNHVQVFSPDGIAIDDEG--------------------YIFVSCNNGCL 651
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
S + R Q+ ++G L P G+A+D G I V GN+ I +
Sbjct: 652 HVLSPD-RKQVKLISG---------------LSDPVGMALDKDGNIYVAVFGNSHITKY 694
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 32 RSQYLQKRRLQF--KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
R QY Q+ + GS G+ G + P G++ +I+VAD+SN RVQV K
Sbjct: 537 RVQYFSATTSQYIGQFGSFGNGNGQLSSPFGMSTDGKGNILVADNSNKRVQV------FK 590
Query: 90 TNCVFLAFTWPRG----IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG 135
+ F+ G +AV + I V S+ + VQVF DG + G
Sbjct: 591 EDGTFVQVIQCDGNATDVAVDNEGKIHVTISNPNHVQVFSPDGIAIDDEG 640
>gi|312621932|ref|YP_004023545.1| nhl repeat containing protein [Caldicellulosiruptor kronotskyensis
2002]
gi|312202399|gb|ADQ45726.1| NHL repeat containing protein [Caldicellulosiruptor kronotskyensis
2002]
Length = 307
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 13/223 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +AV I+VAD+ N R+ F G V G GN+ Q +P + +
Sbjct: 44 PNSVAVDSKGFIIVADTDNCRIVKFDPTGKKVFSIGMKGNQKNQFSYPAAVTCDKNGNIY 103
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ N R+ SDG ++ + + K G+L+ P IAV + VSD +
Sbjct: 104 VADTGNSRLV-------KLSSDGKWIASWEKVKAKQGKLQAPMGIAVDLKGYIYVSDYSL 156
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
++ ++ G ++ + +L FPRG+AVD G + V DSGNNRI + G +
Sbjct: 157 SKIVKYNSKGEFVSEITKLNTNGDKLNFPRGIAVDSAGNLYVADSGNNRIVVINQKGNVV 216
Query: 280 RAFGCWGSGDGEFKGLE--GVAVMSNG-NILVCDRENHRIQVF 319
+ + FK G+A+ +G NI + D + HR+ ++
Sbjct: 217 ---SIYNKINNYFKLHHPLGIAIDQSGENIAITDTDYHRVILY 256
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 125/272 (45%), Gaps = 28/272 (10%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---------FTWPRGIAVGPD 108
P +AV I+VAD+ N R+ FD VF F++P + +
Sbjct: 44 PNSVAVDSKGFIIVADTDNCRI----VKFDPTGKKVFSIGMKGNQKNQFSYPAAVTCDKN 99
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
+I VAD+ N R+ SDG ++ + + K G+L+ P IAV + VSD + ++
Sbjct: 100 GNIYVADTGNSRLVKLSSDGKWIASWEKVKAKQGKLQAPMGIAVDLKGYIYVSDYSLSKI 159
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
++ S G FV + + +L P IAV + + V+DS N+R+ + +
Sbjct: 160 VKYN-------SKGEFVSEITKLNTNGDKLNFPRGIAVDSAGNLYVADSGNNRIVVINQK 212
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGY-ISVGDSGNNRIQIFTPDGQFLRAFGCWGS 287
G V++ + ++ + +L P G+A+D G I++ D+ +R+ +++ ++ WG
Sbjct: 213 GNVVSIY-NKINNYFKLHHPLGIAIDQSGENIAITDTDYHRVILYSLK---MKKAYTWGK 268
Query: 288 GDGEFKGLE---GVAVMSNGNILVCDRENHRI 316
+ L GV GNI+ D N RI
Sbjct: 269 NEKNKFILNYPTGVCFDLKGNIIFADTYNSRI 300
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 7/181 (3%)
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
+K+ L P+ +AV + +IV+D++N R+ FD G+ V G GN+ Q
Sbjct: 36 DKSENLRLPNSVAVDSKGFIIVADTDNCRIVKFDPTGKK-------VFSIGMKGNQKNQF 88
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
+P + + V+D+ N R+ +G+ I S+ +++G+L+ P G+AVD +GY
Sbjct: 89 SYPAAVTCDKNGNIYVADTGNSRLVKLSSDGKWIASWEKVKAKQGKLQAPMGIAVDLKGY 148
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
I V D ++I + G+F+ + + G+AV S GN+ V D N+RI V
Sbjct: 149 IYVSDYSLSKIVKYNSKGEFVSEITKLNTNGDKLNFPRGIAVDSAGNLYVADSGNNRIVV 208
Query: 319 F 319
Sbjct: 209 I 209
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 13/123 (10%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV--------FLAFTWPRGIAVG 106
+PRGIAV ++ VADS N+R+ V + K N V + P GIA+
Sbjct: 182 LNFPRGIAVDSAGNLYVADSGNNRIVV----INQKGNVVSIYNKINNYFKLHHPLGIAID 237
Query: 107 PD-NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
+I + D+ HRV ++ +G L +P + +I +D+ N
Sbjct: 238 QSGENIAITDTDYHRVILYSLKMKKAYTWGKNEKNKFILNYPTGVCFDLKGNIIFADTYN 297
Query: 166 HRV 168
R+
Sbjct: 298 SRI 300
>gi|260785668|ref|XP_002587882.1| hypothetical protein BRAFLDRAFT_87269 [Branchiostoma floridae]
gi|229273037|gb|EEN43893.1| hypothetical protein BRAFLDRAFT_87269 [Branchiostoma floridae]
Length = 618
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 120/269 (44%), Gaps = 59/269 (21%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS-------------------- 136
F P G+AV + I VAD N R+QVF GTFV +F +
Sbjct: 360 FQGPYGVAVSDEGEIFVADYWNQRIQVFTLQGTFVRQFPTVVSGEEKMKPYDVAMDGEGN 419
Query: 137 --------------MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR------ 176
+ NK G++ + + +R + D+ + + I + G
Sbjct: 420 LWVVGVTRSDEFAVLYNKQGRVLRMFGLQKTGRSRGVAMDTRRNNILITQITGDRPNHHG 479
Query: 177 ---VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT 233
VF+ DGT V ++G + G + +P YI V ++VSD N V +++ +G+ +
Sbjct: 480 EVLVFRPDGTLVR---TVGQQQG-MGYPGYITVDGEVNILVSDWVNSCVYVYNEDGQFLF 535
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
FG EGS EGQL PRG+ D G I V D N R+++F G+FL+
Sbjct: 536 QFGGEGSGEGQLNDPRGICTDRAGNIIVADGLNRRVEMFDRTGKFLKHIT---------T 586
Query: 294 GLE---GVAVMSNGNILVCDRENHRIQVF 319
G++ VA+ G ++V D +N+ + +F
Sbjct: 587 GMQYPCAVAMAPQGQLVVTDVKNYSVSIF 615
>gi|260815581|ref|XP_002602551.1| hypothetical protein BRAFLDRAFT_93856 [Branchiostoma floridae]
gi|229287862|gb|EEN58563.1| hypothetical protein BRAFLDRAFT_93856 [Branchiostoma floridae]
Length = 644
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 124/263 (47%), Gaps = 31/263 (11%)
Query: 26 QVGTTPRSQYLQKRRLQ-FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP 84
QVG +P +Q R +G +GS G P G+AV D +I V + N RVQ+
Sbjct: 370 QVGGSPFDITVQSRDTHVLTMGQKGSGVGELYSPVGVAVDKDGNIAVVEQRNKRVQI--- 426
Query: 85 HFDLKTNCVFLAF----TWPRGIAVGPDNSIVVADSSNHR-VQVFQSDGTFVGKFGSMGN 139
FD T +F +P GI V D +V H V+ + G + +
Sbjct: 427 -FDADTGHSLRSFPVEGEYPCGIVVDSDGRFLVTSWGEHYGVRRYSKAGKLLNT-----S 480
Query: 140 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE 199
K+ ++HP I V R+ V+D + + + DG+ + + G G L
Sbjct: 481 KSDCIKHPLGITVLMDGRMAVAD-------LVQKSCLLLTHDGSLIREIGK-----GHLR 528
Query: 200 HPHYIAVSNT-NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
P++IAV + + ++VSD + ++V FD+ G + G +G LK P G+A+D G
Sbjct: 529 TPYFIAVDESRDLILVSDYSANKVLAFDLEGVFKFNLGGQGD---CLKHPLGLALDPAGN 585
Query: 259 ISVGDSGNNRIQIFTPDGQFLRA 281
I V ++G+ R+Q+F PDG F+R
Sbjct: 586 IIVVNNGDGRVQVFGPDGTFIRT 608
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPR 101
+F +G +G C P G+A+ P +I+V ++ + RVQV P V + P
Sbjct: 562 KFNLGGQGD---CLKHPLGLALDPAGNIIVVNNGDGRVQVFGPDGTFIRTVVTMKGGGPF 618
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQ 125
G+ + PD I A + H +V++
Sbjct: 619 GLTLTPDGYITGACYTGHCAEVYR 642
>gi|440586601|emb|CCK33022.1| NHL domain protein Brain Tumour [Platynereis dumerilii]
Length = 750
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 132/302 (43%), Gaps = 55/302 (18%)
Query: 31 PRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ QK K G G G FT P G+AV N I+V
Sbjct: 481 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIV---------------QTP 525
Query: 90 TNCVFLAFTWPRGIAVGPDNS-----------IVVADSSNHRVQVFQSDGTFVGKFGSMG 138
T VF + T R +A +++ +V S H+VQ++ G FV KFG
Sbjct: 526 TTIVFRSST--RRVASSSNSANVESVTTSGDIVVTERSPTHQVQIYNQYGQFVRKFG--- 580
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
A L+HP + V N R+I+ + RV IF G V KFG + L
Sbjct: 581 --ANILQHPRGVTVDNKGRIIIVECKVMRVIIFSQMGDVLH-------KFGC----SKHL 627
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E P+ + V++ + +SD+ H V++F G + G EG +P GV ++ G
Sbjct: 628 EFPNGVVVNDKEEIFISDNRAHCVKVFSYQGVFLRQIGGEGIT----NYPIGVGINPAGE 683
Query: 259 ISVGDSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D+ NN + IFT DGQ + A F VA+M G+I++ ++ +R+
Sbjct: 684 ILVADNHNNFNLTIFTQDGQMVSALESKVKHAQCF----DVALMDEGSIVLASKD-YRLY 738
Query: 318 VF 319
++
Sbjct: 739 IY 740
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 83/203 (40%), Gaps = 45/203 (22%)
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
++T+ VI S I+ ++ + + KFG G GQ P +AV+ N +
Sbjct: 461 TSTDPVIDLTSKLISANIYPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDI 520
Query: 213 IV----------------SDSNN--------------------HRVQIFDVNGRVITSFG 236
IV S SN+ H+VQI++ G+ + FG
Sbjct: 521 IVQTPTTIVFRSSTRRVASSSNSANVESVTTSGDIVVTERSPTHQVQIYNQYGQFVRKFG 580
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
+ L+ PRGV VD++G I + + R+ IF+ G L FGC S EF
Sbjct: 581 A-----NILQHPRGVTVDNKGRIIIVECKVMRVIIFSQMGDVLHKFGC--SKHLEFPN-- 631
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
GV V I + D H ++VF
Sbjct: 632 GVVVNDKEEIFISDNRAHCVKVF 654
>gi|260826067|ref|XP_002607987.1| hypothetical protein BRAFLDRAFT_145376 [Branchiostoma floridae]
gi|229293337|gb|EEN63997.1| hypothetical protein BRAFLDRAFT_145376 [Branchiostoma floridae]
Length = 734
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 108/219 (49%), Gaps = 15/219 (6%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+AV N I+V+D N + +F G + GS+ + GQL++ H + + + +IVSD
Sbjct: 493 VAVNSRNQIIVSDEWNSNMMMFDPFGRHLFTCGSLDSGPGQLDYSHCVITDSEDNIIVSD 552
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
+N RV +F DGTF+ + L P +A++ +IVSD + +
Sbjct: 553 YSNRRVSLF-------SRDGTFIRHV--LTKTEHSLFGPMGLALTCDGHLIVSDYDT--I 601
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPR--GVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
F +G V+ G G ++GQ F VAV+ + I V D NN++ +F P G+ L
Sbjct: 602 TFFIPSGDVMMRIG--GKDQGQQYFGSFLHVAVNSRNQIIVSDCDNNKMMMFDPSGRHLF 659
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G GSG G+ K V S NI+V D NHR+ +F
Sbjct: 660 TCGSLGSGPGQLKNPYCVITDSEDNIIVSDYNNHRVSLF 698
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 28/230 (12%)
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
L F + +AV + IV D +N R+Q F+GK GS + P +A
Sbjct: 355 LEFQFLTSLAVTAEGDIVATDLTNSRLQ-------FLGKDGSFKQRVDLTFQPWSVAAMT 407
Query: 155 TNRVIVSDSNNHRVQIFDVNG---RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
++V+ + H++ + D G R G ++G I+V R
Sbjct: 408 NGELLVT-GDGHKIHVLDKQGTESRAIHVTGAEEKDEPTLG-----------ISVDGLGR 455
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR--GVAVDDQGYISVGDSGNNRI 269
+IV+ H+V +G V+ G G ++GQ F VAV+ + I V D N+ +
Sbjct: 456 IIVT--IGHQVFKLSPSGDVMMRIG--GKDQGQQDFGSILRVAVNSRNQIIVSDEWNSNM 511
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+F P G+ L G SG G+ V S NI+V D N R+ +F
Sbjct: 512 MMFDPFGRHLFTCGSLDSGPGQLDYSHCVITDSEDNIIVSDYSNRRVSLF 561
>gi|260826057|ref|XP_002607982.1| hypothetical protein BRAFLDRAFT_213523 [Branchiostoma floridae]
gi|229293332|gb|EEN63992.1| hypothetical protein BRAFLDRAFT_213523 [Branchiostoma floridae]
Length = 749
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 13/219 (5%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+AV N I+V+D N + +F G + GS G+ GQL+ PH + + + +IVSD
Sbjct: 498 VAVNSRNQIIVSDECNSNMMMFDPSGRRLFTCGSRGSGPGQLDPPHCVITDSEDDIIVSD 557
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
NNHRV +F DGTF+ + L P +A+++ +IVSD N R
Sbjct: 558 YNNHRVSLF-------SRDGTFIRHV--LTKTEHGLNGPMGLALTHDGHLIVSD--NLRC 606
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRG--VAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
+F ++ G EG ++GQ F VAV+ + I V D N ++ +F P G+ L
Sbjct: 607 CLFKLSPSGDVMMGIEGEDQGQQYFGSSLCVAVNSRNQIIVSDWHNIKMMMFDPSGRHLF 666
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G SG G+ V S +I+V D N R+ +F
Sbjct: 667 TCGSRVSGPGQLNTPHCVITDSEDDIIVSDWNNRRVSLF 705
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 110/263 (41%), Gaps = 49/263 (18%)
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F F +AV + IV D N R+Q + DG+F K L +
Sbjct: 359 FGQFIGLESLAVTAEGDIVATDRGNSRLQFWGKDGSF--------KKKVDLRFKPLCVAA 410
Query: 154 NTNRVIVSDSNNHRVQIFDVNGR---------------------------VFQSDGTFVG 186
TN ++ + H++ + D GR + + G V
Sbjct: 411 LTNGDLLVTGDGHKIHVLDKQGRESRAIQVTEAEEKDEPTLGITVDGLGRIIVTIGHQVF 470
Query: 187 KFGSMGNKA----GQLEHPHY------IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
K G G+ G+ + Y +AV++ N++IVSD N + +FD +GR + + G
Sbjct: 471 KLGPGGDVMMRIGGKDQGQQYFGSSLRVAVNSRNQIIVSDECNSNMMMFDPSGRRLFTCG 530
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
S GS GQL P V D + I V D N+R+ +F+ DG F+R + G
Sbjct: 531 SRGSGPGQLDPPHCVITDSEDDIIVSDYNNHRVSLFSRDGTFIRHV--LTKTEHGLNGPM 588
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
G+A+ +G+++V D N R +F
Sbjct: 589 GLALTHDGHLIVSD--NLRCCLF 609
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 90/242 (37%), Gaps = 60/242 (24%)
Query: 123 VFQSDGTFVGKFGSMG-NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSD 181
V DG + + +G N GQ +AV+ ++ +D N R+Q
Sbjct: 340 VIGKDGGGLKRIKVVGENGFGQFIGLESLAVTAEGDIVATDRGNSRLQ------------ 387
Query: 182 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN------------- 228
F GK GS K P +A ++V+ + H++ + D
Sbjct: 388 --FWGKDGSFKKKVDLRFKPLCVAALTNGDLLVT-GDGHKIHVLDKQGRESRAIQVTEAE 444
Query: 229 --------------GRVITSFGSE---------------GSEEGQLKFPRG--VAVDDQG 257
GR+I + G + G ++GQ F VAV+ +
Sbjct: 445 EKDEPTLGITVDGLGRIIVTIGHQVFKLGPGGDVMMRIGGKDQGQQYFGSSLRVAVNSRN 504
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D N+ + +F P G+ L G GSG G+ V S +I+V D NHR+
Sbjct: 505 QIIVSDECNSNMMMFDPSGRRLFTCGSRGSGPGQLDPPHCVITDSEDDIIVSDYNNHRVS 564
Query: 318 VF 319
+F
Sbjct: 565 LF 566
>gi|260803617|ref|XP_002596686.1| hypothetical protein BRAFLDRAFT_78416 [Branchiostoma floridae]
gi|229281945|gb|EEN52698.1| hypothetical protein BRAFLDRAFT_78416 [Branchiostoma floridae]
Length = 498
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 29/259 (11%)
Query: 56 TW----PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSI 111
TW P IAV + I V ++ R++ + D C + P GI + +
Sbjct: 247 TWGLCNPTDIAVSINGEIAVVEAGLRRIKTFNTNGD-SCRCFLVDGKCPWGIDIDSNRQF 305
Query: 112 VVA-DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
VV S+ ++V+ D F ++ + L +P +AV R++V+D +
Sbjct: 306 VVTFLSTGQAIRVYSHDTIL---FKTL--RLDCLRNPTGVAVLKDGRMVVADKQQKSCLL 360
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT-NRVIVSDSNNHRVQIFDVNG 229
+ DG+F+ + G GQL++P +IAV + +R V+D H+V +FD+ G
Sbjct: 361 L-------KPDGSFIREIGK-----GQLQYPWFIAVDESRDRFYVTDCRAHKVFVFDLEG 408
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
++ SFG +G EG+L+ P G+ VD G I V + N +Q+F PDG + R G
Sbjct: 409 KLKFSFGKQGQNEGELECPTGIRVDPAGNIIVINRDNGHLQVFDPDGMYQRTVATVKRG- 467
Query: 290 GEFKGLEGVAVMSNGNILV 308
+G+A+ +G + V
Sbjct: 468 ----CHQGIALTPDGYLAV 482
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 44/231 (19%)
Query: 120 RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG---R 176
RVQ + +G +G L +P IAVS + V ++ R++ F+ NG R
Sbjct: 234 RVQSSHAPVVTIGTWG--------LCNPTDIAVSINGEIAVVEAGLRRIKTFNTNGDSCR 285
Query: 177 VFQSDGT------------FVGKFGSMGN---------------KAGQLEHPHYIAVSNT 209
F DG FV F S G + L +P +AV
Sbjct: 286 CFLVDGKCPWGIDIDSNRQFVVTFLSTGQAIRVYSHDTILFKTLRLDCLRNPTGVAVLKD 345
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNR 268
R++V+D + +G I G +GQL++P +AVD+ + V D ++
Sbjct: 346 GRMVVADKQQKSCLLLKPDGSFIREIG-----KGQLQYPWFIAVDESRDRFYVTDCRAHK 400
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ +F +G+ +FG G +GE + G+ V GNI+V +R+N +QVF
Sbjct: 401 VFVFDLEGKLKFSFGKQGQNEGELECPTGIRVDPAGNIIVINRDNGHLQVF 451
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 60/209 (28%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVV 113
C P G+AV D +VVAD + +C+ L
Sbjct: 333 CLRNPTGVAVLKDGRMVVADKQ-------------QKSCLLL------------------ 361
Query: 114 ADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT-NRVIVSDSNNHRVQIFD 172
+ DG+F+ + G GQL++P +IAV + +R V+D H+V +FD
Sbjct: 362 -----------KPDGSFIREIGK-----GQLQYPWFIAVDESRDRFYVTDCRAHKVFVFD 405
Query: 173 VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
+ G++ S FG G G+LE P I V +IV + +N +Q+FD +G
Sbjct: 406 LEGKLKFS-------FGKQGQNEGELECPTGIRVDPAGNIIVINRDNGHLQVFDPDGMYQ 458
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISV 261
+ + Q G+A+ GY++V
Sbjct: 459 RTVATVKRGCHQ-----GIALTPDGYLAV 482
>gi|312380645|gb|EFR26582.1| hypothetical protein AND_07237 [Anopheles darlingi]
Length = 459
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 73/122 (59%)
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
L++P I + + V+V D+ N RV++F +G + FG G+ GQ ++P +AVD G
Sbjct: 337 LKNPTDIVIQKDSTVVVLDAGNRRVKVFGKHGEQLLEFGQSGTINGQFQYPEVIAVDPAG 396
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
+I VGD GN +I ++ P+GQF+ + G G G+F + G+ V S+ I+ D +NH +Q
Sbjct: 397 FILVGDGGNAKILVYRPNGQFVTSLGSRGDSAGKFNWISGICVSSDWEIVTSDYKNHAVQ 456
Query: 318 VF 319
+
Sbjct: 457 MI 458
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 7/138 (5%)
Query: 88 LKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHP 147
LK + + P I + D+++VV D+ N RV+VF G + +FG G GQ ++P
Sbjct: 328 LKVSSRMVDLKNPTDIVIQKDSTVVVLDAGNRRVKVFGKHGEQLLEFGQSGTINGQFQYP 387
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
IAV ++V D N ++ ++ NG+ FV GS G+ AG+ I VS
Sbjct: 388 EVIAVDPAGFILVGDGGNAKILVYRPNGQ-------FVTSLGSRGDSAGKFNWISGICVS 440
Query: 208 NTNRVIVSDSNNHRVQIF 225
+ ++ SD NH VQ+
Sbjct: 441 SDWEIVTSDYKNHAVQMI 458
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
L++P I + + V+V D+ N RV +VF G + +FG G GQ ++P
Sbjct: 337 LKNPTDIVIQKDSTVVVLDAGNRRV-------KVFGKHGEQLLEFGQSGTINGQFQYPEV 389
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
IAV ++V D N ++ ++ NG+ +TS GS G G+ + G+ V I D
Sbjct: 390 IAVDPAGFILVGDGGNAKILVYRPNGQFVTSLGSRGDSAGKFNWISGICVSSDWEIVTSD 449
Query: 264 SGNNRIQIF 272
N+ +Q+
Sbjct: 450 YKNHAVQMI 458
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL-----KTNCVFLA 96
Q K+ SR + P I + D+++VV D+ N RV+V H + ++ +
Sbjct: 327 QLKVSSRMVD---LKNPTDIVIQKDSTVVVLDAGNRRVKVFGKHGEQLLEFGQSGTINGQ 383
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F +P IAV P I+V D N ++ V++ +G FV GS G+ AG+ I VS+
Sbjct: 384 FQYPEVIAVDPAGFILVGDGGNAKILVYRPNGQFVTSLGSRGDSAGKFNWISGICVSSDW 443
Query: 157 RVIVSDSNNHRVQIF 171
++ SD NH VQ+
Sbjct: 444 EIVTSDYKNHAVQMI 458
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF 83
+GSRG G F W GI V D IV +D NH VQ+ +
Sbjct: 421 LGSRGDSAGKFNWISGICVSSDWEIVTSDYKNHAVQMIY 459
>gi|222529848|ref|YP_002573730.1| NHL repeat-containing protein [Caldicellulosiruptor bescii DSM
6725]
gi|222456695|gb|ACM60957.1| NHL repeat containing protein [Caldicellulosiruptor bescii DSM
6725]
Length = 307
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 13/223 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +AV I+VAD+ N R+ F G V G GN+ Q +P + +
Sbjct: 44 PNSVAVDSKGFIIVADTDNCRIVKFDHTGKKVFSIGMKGNQKNQFSYPAAVTCDKNGNIY 103
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ N R+ DG ++ + + K G+L+ P IAV + VSD +
Sbjct: 104 VADTGNSRLV-------KLSPDGKWIASWEKVKAKQGKLQAPMGIAVDLKGYIYVSDYSL 156
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
++ ++ G+ ++ + +L FPRG+AVD G + V DSGNNRI + G +
Sbjct: 157 SKIVKYNSEGKFVSEITKLNTNGDKLNFPRGIAVDSAGNLYVADSGNNRIVVINQKGNVV 216
Query: 280 RAFGCWGSGDGEFKGLE--GVAVMSNG-NILVCDRENHRIQVF 319
+ + FK G+A+ +G NI + D + HRI ++
Sbjct: 217 ---SIYNKINNYFKLHHPLGIAIDQSGENIAITDTDYHRIILY 256
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 129/269 (47%), Gaps = 22/269 (8%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------FTWPRGIAVGPDNSI 111
P +AV I+VAD+ N R+ V F H K + + F++P + + +I
Sbjct: 44 PNSVAVDSKGFIIVADTDNCRI-VKFDHTGKKVFSIGMKGNQKNQFSYPAAVTCDKNGNI 102
Query: 112 VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
VAD+ N R+ DG ++ + + K G+L+ P IAV + VSD + ++ +
Sbjct: 103 YVADTGNSRLVKLSPDGKWIASWEKVKAKQGKLQAPMGIAVDLKGYIYVSDYSLSKIVKY 162
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
+ S+G FV + + +L P IAV + + V+DS N+R+ + + G V
Sbjct: 163 N-------SEGKFVSEITKLNTNGDKLNFPRGIAVDSAGNLYVADSGNNRIVVINQKGNV 215
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGY-ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
++ + ++ + +L P G+A+D G I++ D+ +RI +++ + +A+ WG +
Sbjct: 216 VSIY-NKINNYFKLHHPLGIAIDQSGENIAITDTDYHRIILYSIKTK--KAY-TWGKNEK 271
Query: 291 EFKGL---EGVAVMSNGNILVCDRENHRI 316
L GV GNI+ D N RI
Sbjct: 272 NKFILNYPTGVCFDLKGNIIFADTYNSRI 300
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 7/181 (3%)
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
+K+ L P+ +AV + +IV+D++N R+ FD G+ V G GN+ Q
Sbjct: 36 DKSEILRLPNSVAVDSKGFIIVADTDNCRIVKFDHTGKK-------VFSIGMKGNQKNQF 88
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
+P + + V+D+ N R+ +G+ I S+ +++G+L+ P G+AVD +GY
Sbjct: 89 SYPAAVTCDKNGNIYVADTGNSRLVKLSPDGKWIASWEKVKAKQGKLQAPMGIAVDLKGY 148
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
I V D ++I + +G+F+ + + G+AV S GN+ V D N+RI V
Sbjct: 149 IYVSDYSLSKIVKYNSEGKFVSEITKLNTNGDKLNFPRGIAVDSAGNLYVADSGNNRIVV 208
Query: 319 F 319
Sbjct: 209 I 209
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 13/123 (10%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV--------FLAFTWPRGIAVG 106
+PRGIAV ++ VADS N+R+ V + K N V + P GIA+
Sbjct: 182 LNFPRGIAVDSAGNLYVADSGNNRIVV----INQKGNVVSIYNKINNYFKLHHPLGIAID 237
Query: 107 PD-NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
+I + D+ HR+ ++ +G L +P + +I +D+ N
Sbjct: 238 QSGENIAITDTDYHRIILYSIKTKKAYTWGKNEKNKFILNYPTGVCFDLKGNIIFADTYN 297
Query: 166 HRV 168
R+
Sbjct: 298 SRI 300
>gi|410915826|ref|XP_003971388.1| PREDICTED: FH2 domain-containing protein 1-like [Takifugu rubripes]
Length = 856
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
PH++AV+N N +IV+D +NH V++++ +G + FGS G GQ P GVAVD G I
Sbjct: 737 PHFVAVNNKNEIIVTDFHNHSVKVYNADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNII 796
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V D GN+RIQ+F G FL S D + G +G+A+ S+G++ V D NH +V+
Sbjct: 797 VADWGNSRIQVFDSTGSFLSYINT--SADPLY-GPQGLALTSDGHVAVADSGNHCFKVY 852
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 74/126 (58%), Gaps = 10/126 (7%)
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
PH++AV+N N +IV+D +NH V +V+ +DG F+ KFGS G GQ P +AV
Sbjct: 737 PHFVAVNNKNEIIVTDFHNHSV-------KVYNADGEFLFKFGSHGEGNGQFNAPTGVAV 789
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
+ +IV+D N R+Q+FD G ++ + L P+G+A+ G+++V DSGN
Sbjct: 790 DSNGNIIVADWGNSRIQVFDSTGSFLSYINTSAD---PLYGPQGLALTSDGHVAVADSGN 846
Query: 267 NRIQIF 272
+ +++
Sbjct: 847 HCFKVY 852
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 10/126 (7%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +AV N I+V D NH V+V+ +DG F+ KFGS G GQ P +AV + +I
Sbjct: 737 PHFVAVNNKNEIIVTDFHNHSVKVYNADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNII 796
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D N R+Q+FD S G+F+ + A L P +A+++ V V+DS N
Sbjct: 797 VADWGNSRIQVFD-------STGSFL---SYINTSADPLYGPQGLALTSDGHVAVADSGN 846
Query: 220 HRVQIF 225
H +++
Sbjct: 847 HCFKVY 852
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 30/187 (16%)
Query: 7 AKNINSCFLLQTLLVSGIGQVG-------TTPRSQYLQKRRLQFKIGSRGSEPGCFTW-- 57
++++ S F L L +GQ TPR + + + ++G S G ++
Sbjct: 674 SQSLTSRFSLGELFQRSVGQRSYSHGSRTETPRVRSAFSCKSELEVGKPNSS-GLISFFR 732
Query: 58 ----PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------AFTWPRGIA 104
P +AV N I+V D NH V+V ++ +F F P G+A
Sbjct: 733 RIGGPHFVAVNNKNEIIVTDFHNHSVKV----YNADGEFLFKFGSHGEGNGQFNAPTGVA 788
Query: 105 VGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 164
V + +I+VAD N R+QVF S G+F+ + A L P +A+++ V V+DS
Sbjct: 789 VDSNGNIIVADWGNSRIQVFDSTGSFL---SYINTSADPLYGPQGLALTSDGHVAVADSG 845
Query: 165 NHRVQIF 171
NH +++
Sbjct: 846 NHCFKVY 852
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
FK GS G G F P G+AV + +I+VAD N R+QV FD + FL++
Sbjct: 769 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQV----FD--STGSFLSYINTSA 822
Query: 99 ----WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D + VADS NH +V++
Sbjct: 823 DPLYGPQGLALTSDGHVAVADSGNHCFKVYR 853
>gi|290990564|ref|XP_002677906.1| NHL domain-containing protein kinase [Naegleria gruberi]
gi|284091516|gb|EFC45162.1| NHL domain-containing protein kinase [Naegleria gruberi]
Length = 2733
Score = 95.1 bits (235), Expect = 4e-17, Method: Composition-based stats.
Identities = 77/305 (25%), Positives = 132/305 (43%), Gaps = 48/305 (15%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------------------ 96
+P G+AV + I +AD+ NHR++ ++TN
Sbjct: 515 LNFPSGVAVSSNGDIYIADTENHRIR------KIETNGYIATVAGSGASGYSGDGGLLTS 568
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTF-----VGKFGSMGNKA----GQLE 145
F P+G+AV + I +AD+ NH V+ + G +G G+ +L
Sbjct: 569 AKFQQPQGVAVSSNGEIYIADTENHVVRKISTSNVLSTIAGTGSYGYNGDGGLAITAKLF 628
Query: 146 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA--GQLEHPHY 203
P +A+S++ V ++D+NNHR++ +G + GT + + G+ A +L +P
Sbjct: 629 SPIGVAISSSGEVFIADNNNHRIRKIAKDGYISTIVGTGLNGYDGDGDLATNAKLGNPQG 688
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVIT-----SFGSEG----SEEGQLKFPRGVAVD 254
+ +S T + ++D NNHR++ NG + T +FG G + +L P G+A
Sbjct: 689 VTLSPTGELFIADQNNHRIRKVASNGYISTVAGNGNFGFSGDGDLATNAELNSPSGIAFS 748
Query: 255 DQGYISVGDSGNNRIQ--IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRE 312
G + + D N I+ I G G G + + + S G I + D E
Sbjct: 749 SIGTMYIADRLNRVIRRVISGNISTIAGGVGDGGPATGGYIQAQSFDISSTGEIYIADTE 808
Query: 313 NHRIQ 317
NHRI+
Sbjct: 809 NHRIR 813
Score = 90.1 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 76/309 (24%), Positives = 137/309 (44%), Gaps = 48/309 (15%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRV-QVCFPHFDLKT-------------NCVFLA-FTW 99
+ R IAV + + +AD+ N+R+ +V F + T N A +
Sbjct: 458 LNYARSIAVNSNGDVYIADTYNNRIRKVSFSTGIISTVAGTGIAGQNGDGNLATSAQLNF 517
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGN---------KAGQLEHPHYI 150
P G+AV + I +AD+ NHR++ +++G GS + + + + P +
Sbjct: 518 PSGVAVSSNGDIYIADTENHRIRKIETNGYIATVAGSGASGYSGDGGLLTSAKFQQPQGV 577
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA----GQLEHPHYIAV 206
AVS+ + ++D+ NH V+ + + GT G +G G+ +L P +A+
Sbjct: 578 AVSSNGEIYIADTENHVVRKISTSNVLSTIAGT--GSYGYNGDGGLAITAKLFSPIGVAI 635
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGS---------EGSEEGQLKFPRGVAVDDQG 257
S++ V ++D+NNHR++ +G + T G+ + + +L P+GV + G
Sbjct: 636 SSSGEVFIADNNNHRIRKIAKDGYISTIVGTGLNGYDGDGDLATNAKLGNPQGVTLSPTG 695
Query: 258 YISVGDSGNNRIQIFTPDGQFLRA-----FGCWGSGD----GEFKGLEGVAVMSNGNILV 308
+ + D N+RI+ +G FG G GD E G+A S G + +
Sbjct: 696 ELFIADQNNHRIRKVASNGYISTVAGNGNFGFSGDGDLATNAELNSPSGIAFSSIGTMYI 755
Query: 309 CDRENHRIQ 317
DR N I+
Sbjct: 756 ADRLNRVIR 764
Score = 81.3 bits (199), Expect = 6e-13, Method: Composition-based stats.
Identities = 77/304 (25%), Positives = 126/304 (41%), Gaps = 53/304 (17%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHF-----------------DLKTNCVFLAFTWP 100
P G+A+ + +AD++NHR++ DL TN P
Sbjct: 630 PIGVAISSSGEVFIADNNNHRIRKIAKDGYISTIVGTGLNGYDGDGDLATNA---KLGNP 686
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFV-----GKFGSMGN----KAGQLEHPHYIA 151
+G+ + P + +AD +NHR++ S+G G FG G+ +L P IA
Sbjct: 687 QGVTLSPTGELFIADQNNHRIRKVASNGYISTVAGNGNFGFSGDGDLATNAELNSPSGIA 746
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSD-GTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
S+ + ++D N ++ RV + T G G G G +S+T
Sbjct: 747 FSSIGTMYIADRLNRVIR------RVISGNISTIAGGVGDGGPATGGYIQAQSFDISSTG 800
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEG---SEEG------QLKFPRGVAVDDQGYISV 261
+ ++D+ NHR++ G++ T G+ S +G +L P GVAV G + +
Sbjct: 801 EIYIADTENHRIRKVSTLGKISTIAGTGAMGYSGDGGLAITAKLSSPVGVAVSSTGEVFI 860
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSG------DGEFKGLEGVA--VMSNGNILVCDREN 313
D N+RI+ T G G SG + +F L + +S G I + D N
Sbjct: 861 ADRDNHRIRKVTLSGIITTIAGNGTSGFNSDGIEAKFAQLNSPSSVTISGGEIYIADTNN 920
Query: 314 HRIQ 317
HRI+
Sbjct: 921 HRIR 924
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 71/254 (27%), Positives = 111/254 (43%), Gaps = 61/254 (24%)
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDG--TFVGKFGSMG-------NKAGQLEHPHY 149
+P G+A+ I +ADS+N+R++ ++G T + G+ G + +L P
Sbjct: 112 YPYGVALSLGGEIYIADSNNNRIRKIATNGIITTIAGTGTRGYDGDGALATSAKLNFPSS 171
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA----GQLEHPHYIA 205
IA++ NG + GT G +G G+ A QL P IA
Sbjct: 172 IAITT-------------------NGNISTIAGTGTGSYG--GDNAIATGAQLYAPACIA 210
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSE----------EGQLKFPRGVAVDD 255
+ + +SDS NHR++ NG +IT+ G+ QL P GV V+
Sbjct: 211 IDSNGEFYISDSMNHRIRKIATNG-IITTIAGTGTHGYDGDGALAINAQLYSPTGVVVNS 269
Query: 256 QGYISVGDSGNNRIQ------IFTPDGQFLRAFGCWGSGDG------EFKGLEGVAVMSN 303
G + + DSGNNRI+ I T G + + SGDG + + VA+ N
Sbjct: 270 NGDVYIADSGNNRIRKISKGYISTVAGNGIAGY----SGDGGLSTSAQLATPQSVAINLN 325
Query: 304 GNILVCDRENHRIQ 317
G I++ D N+RI+
Sbjct: 326 GEIIIADSNNNRIR 339
Score = 74.7 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 72/247 (29%), Positives = 115/247 (46%), Gaps = 38/247 (15%)
Query: 57 WPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF--LAFTWPRGI----AVGPDNS 110
+P G+A+ I +ADS+N+R++ + TN + +A T RG A+
Sbjct: 112 YPYGVALSLGGEIYIADSNNNRIR------KIATNGIITTIAGTGTRGYDGDGALATSAK 165
Query: 111 I----VVADSSNHRVQVFQSDGTFVGKFGSMGNKA----GQLEHPHYIAVSNTNRVIVSD 162
+ +A ++N + GT G +G G+ A QL P IA+ + +SD
Sbjct: 166 LNFPSSIAITTNGNISTIAGTGT--GSYG--GDNAIATGAQLYAPACIAIDSNGEFYISD 221
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA----GQLEHPHYIAVSNTNRVIVSDSN 218
S NHR++ NG + GT G G G+ A QL P + V++ V ++DS
Sbjct: 222 SMNHRIRKIATNGIITTIAGT--GTHGYDGDGALAINAQLYSPTGVVVNSNGDVYIADSG 279
Query: 219 NHRVQ------IFDVNGRVITSFGSEG--SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
N+R++ I V G I + +G S QL P+ VA++ G I + DS NNRI+
Sbjct: 280 NNRIRKISKGYISTVAGNGIAGYSGDGGLSTSAQLATPQSVAINLNGEIIIADSNNNRIR 339
Query: 271 IFTPDGQ 277
+G+
Sbjct: 340 KIATNGK 346
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 25/184 (13%)
Query: 111 IVVADSSNHRVQVFQSDG--TFVGKFGSMGNKA-------GQLEHPHYIAVSNTNRVIVS 161
I +AD+ NHR++ + G + + G+MG +L P +AVS+T V ++
Sbjct: 802 IYIADTENHRIRKVSTLGKISTIAGTGAMGYSGDGGLAITAKLSSPVGVAVSSTGEVFIA 861
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA--GQLEHPHYIAVSNTNRVIVSDSNN 219
D +NHR++ ++G + G F S G +A QL P + +S + ++D+NN
Sbjct: 862 DRDNHRIRKVTLSGIITTIAGNGTSGFNSDGIEAKFAQLNSPSSVTISG-GEIYIADTNN 920
Query: 220 HRVQIFDVNGRVITSFGSEG----------SEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
HR++ G +I + G QL P GVA+ I + + N RI
Sbjct: 921 HRIRQISNTG-IIKTIAGNGFGGYIGDGVLPPNAQLNSPSGVAISSTAEIYIAE--NKRI 977
Query: 270 QIFT 273
+ T
Sbjct: 978 RKLT 981
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 12/149 (8%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV-----GKFGSMGNKA----GQLEHPHYI 150
P IA+ + ++DS NHR++ ++G G G G+ A QL P +
Sbjct: 206 PACIAIDSNGEFYISDSMNHRIRKIATNGIITTIAGTGTHGYDGDGALAINAQLYSPTGV 265
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG--NKAGQLEHPHYIAVSN 208
V++ V ++DS N+R++ G + G + + G + + QL P +A++
Sbjct: 266 VVNSNGDVYIADSGNNRIRKIS-KGYISTVAGNGIAGYSGDGGLSTSAQLATPQSVAINL 324
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGS 237
+I++DSNN+R++ NG++ T G+
Sbjct: 325 NGEIIIADSNNNRIRKIATNGKISTIAGT 353
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 39/221 (17%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN------------- 91
+G G G + + + I +AD+ NHR++ + T
Sbjct: 778 VGDGGPATGGYIQAQSFDISSTGEIYIADTENHRIRKVSTLGKISTIAGTGAMGYSGDGG 837
Query: 92 -CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDG---TFVGK----FGSMGNKA-- 141
+ + P G+AV + +AD NHR++ G T G F S G +A
Sbjct: 838 LAITAKLSSPVGVAVSSTGEVFIADRDNHRIRKVTLSGIITTIAGNGTSGFNSDGIEAKF 897
Query: 142 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA----GQ 197
QL P + +S + ++D+NNHR++ G + G G G +G+ Q
Sbjct: 898 AQLNSPSSVTISG-GEIYIADTNNHRIRQISNTGIIKTIAGNGFG--GYIGDGVLPPNAQ 954
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSE 238
L P +A+S+T + +++ N R+ R +T+F +E
Sbjct: 955 LNSPSGVAISSTAEIYIAE--NKRI-------RKLTAFCTE 986
Score = 46.2 bits (108), Expect = 0.021, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 35/140 (25%)
Query: 195 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSE----------EGQ 244
A QL +P+ +A+S + ++DSNN+R++ NG +IT+ G+ +
Sbjct: 107 AAQLFYPYGVALSLGGEIYIADSNNNRIRKIATNG-IITTIAGTGTRGYDGDGALATSAK 165
Query: 245 LKFPRGVAVDDQGYISV-------GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
L FP +A+ G IS G+N I G L A C
Sbjct: 166 LNFPSSIAITTNGNISTIAGTGTGSYGGDNAIAT----GAQLYAPAC------------- 208
Query: 298 VAVMSNGNILVCDRENHRIQ 317
+A+ SNG + D NHRI+
Sbjct: 209 IAIDSNGEFYISDSMNHRIR 228
>gi|307207971|gb|EFN85530.1| Brain tumor protein [Harpegnathos saltator]
Length = 955
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 110/259 (42%), Gaps = 44/259 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G +G D I+VAD++NHR+Q+F GTF +FG G + GQL +P +AV N
Sbjct: 699 FNSPHGFCLGTDEDIIVADTNNHRIQIFDKTGTFKFQFGVPGKEEGQLWYPRKVAVMKNN 758
Query: 157 -RVIVSDSNNH--RVQIFD----------------VNGRVFQSDGTFV------------ 185
+ +V D N R+QIF V G S G V
Sbjct: 759 GKFVVCDRGNERSRMQIFTKSGHFIKKIAIRYIDIVAGLAVTSQGHIVAVDSVSPTVFVI 818
Query: 186 ---GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
G + + + P IA+S V D H V +F+ +G+ + G E
Sbjct: 819 SDTGDLLRWFDCSDYMREPSDIAISG-KEYFVCDFKGHCVVVFNEDGKFLRRIGC----E 873
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNR--IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
FP G+ + D G + +GDS NR + +F+ DG + F C GL+ +
Sbjct: 874 NLTNFPNGIDISDAGDVLIGDSHGNRFHVAVFSRDGSLISEFECPYVKVSRCCGLK---I 930
Query: 301 MSNGNILVCDRENHRIQVF 319
S G I+ + NH + V
Sbjct: 931 TSEGYIVTLAKNNHHVLVL 949
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 68/127 (53%), Gaps = 8/127 (6%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
KFG +G GQ PH + +IV+D+NNHR+QIFD G FG G EEGQL
Sbjct: 688 KFGQLGPSKGQFNSPHGFCLGTDEDIIVADTNNHRIQIFDKTGTFKFQFGVPGKEEGQLW 747
Query: 247 FPRGVAV-DDQGYISVGDSGN--NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
+PR VAV + G V D GN +R+QIFT G F++ + G+AV S
Sbjct: 748 YPRKVAVMKNNGKFVVCDRGNERSRMQIFTKSGHFIKKIAIR-----YIDIVAGLAVTSQ 802
Query: 304 GNILVCD 310
G+I+ D
Sbjct: 803 GHIVAVD 809
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 87/190 (45%), Gaps = 20/190 (10%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
KFG +G GQ PH + +IV+D+NNHR+QIFD GTF +FG G
Sbjct: 688 KFGQLGPSKGQFNSPHGFCLGTDEDIIVADTNNHRIQIFD-------KTGTFKFQFGVPG 740
Query: 193 NKAGQLEHPHYIAVSNTN-RVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
+ GQL +P +AV N + +V D N R+QIF +G I +
Sbjct: 741 KEEGQLWYPRKVAVMKNNGKFVVCDRGNERSRMQIFTKSGHFIKKIAIR-----YIDIVA 795
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
G+AV QG+I DS + + + + G LR F C ++ +S VC
Sbjct: 796 GLAVTSQGHIVAVDSVSPTVFVISDTGDLLRWFDC-----SDYMREPSDIAISGKEYFVC 850
Query: 310 DRENHRIQVF 319
D + H + VF
Sbjct: 851 DFKGHCVVVF 860
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
SNN ++ + + FG G +GQ P G + I V D+ N+RIQIF G
Sbjct: 675 SNNAKLTPMHIRSK----FGQLGPSKGQFNSPHGFCLGTDEDIIVADTNNHRIQIFDKTG 730
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVM-SNGNILVCDR--ENHRIQVF 319
F FG G +G+ VAVM +NG +VCDR E R+Q+F
Sbjct: 731 TFKFQFGVPGKEEGQLWYPRKVAVMKNNGKFVVCDRGNERSRMQIF 776
>gi|260785784|ref|XP_002587940.1| hypothetical protein BRAFLDRAFT_87328 [Branchiostoma floridae]
gi|229273095|gb|EEN43951.1| hypothetical protein BRAFLDRAFT_87328 [Branchiostoma floridae]
Length = 631
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 109/209 (52%), Gaps = 30/209 (14%)
Query: 115 DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY---IAVS-NTNRVIVSDSNNHRVQI 170
+++ H VQ + +DGT + +F LE Y I V TN +++SD +N V
Sbjct: 441 ETAEHVVQ-YSTDGTAMEQFD--------LEKRIYFRGITVDMRTNHILMSDPDNGEVH- 490
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VF+ DG+ V ++ + G + P Y+ V ++VSD H V ++D +G+
Sbjct: 491 ------VFRPDGSLVR---TVRHPRGGMTRPRYVTVDGEGNILVSDWGTHCVYVYDESGK 541
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
++ FG +GS EGQ+ P+G+ D G+I V D N R+QIFT G+F+R F G
Sbjct: 542 LLFQFGGKGSGEGQMSDPQGICTDSSGHILVADFWNKRVQIFTRHGEFVRTFHT-----G 596
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ EG+AV G ++V + +H + V+
Sbjct: 597 FYS--EGLAVGPEGQLVVTNHSDHAVTVY 623
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 17/170 (10%)
Query: 59 RGIAVG-PDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--AFTWPRGIAVGPDNSIVVAD 115
RGI V N I+++D N V V P L T PR + V + +I+V+D
Sbjct: 468 RGITVDMRTNHILMSDPDNGEVHVFRPDGSLVRTVRHPRGGMTRPRYVTVDGEGNILVSD 527
Query: 116 SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 175
H V V+ G + +FG G+ GQ+ P I ++ ++V+D N RVQIF +G
Sbjct: 528 WGTHCVYVYDESGKLLFQFGGKGSGEGQMSDPQGICTDSSGHILVADFWNKRVQIFTRHG 587
Query: 176 RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
+ TF F S G +AV +++V++ ++H V ++
Sbjct: 588 EFVR---TFHTGFYSEG-----------LAVGPEGQLVVTNHSDHAVTVY 623
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + +L F+ G +GS G + P+GI I+VAD N RVQ+ H + F
Sbjct: 536 YDESGKLLFQFGGKGSGEGQMSDPQGICTDSSGHILVADFWNKRVQIFTRHGEFVRT--F 593
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
+ G+AVGP+ +VV + S+H V V+
Sbjct: 594 HTGFYSEGLAVGPEGQLVVTNHSDHAVTVY 623
>gi|290983722|ref|XP_002674577.1| predicted protein [Naegleria gruberi]
gi|284088168|gb|EFC41833.1| predicted protein [Naegleria gruberi]
Length = 328
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 123/271 (45%), Gaps = 36/271 (13%)
Query: 58 PRGIAVGPD-NSIVVADSSNHRVQ-------VCFPHFDLKTNCVFLAFTWPRGIAVGPDN 109
P I + P N++V+ D + RV + F + + CV +GI V P +
Sbjct: 82 PFSIKLLPKSNTLVMVDGNIGRVVMKDATTGIIKEDFSVTSGCV-------KGIGVDPTD 134
Query: 110 SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 169
S ++ + G ++GKF K L +P+ V +T V ++D N+ ++
Sbjct: 135 DSFYIISGKFLIK-YDYRGVYLGKFA----KKMNLNNPYGCTVDDTGNVYITDLNDCKI- 188
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV-IVSDSNNHRVQIFDVN 228
V + V K + P+ I N N++ IV+D V+I +
Sbjct: 189 ------VVLSREEQLVNKI--------EFNKPYDIVFDNVNKLLIVTDQQKDCVRILAKS 234
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G+ I G +G+ +GQ P GV VD I V D GN+R+Q+F +G+FL +FG G+
Sbjct: 235 GQEIRKIGDKGNAKGQFSSPSGVCVDGNSQIFVADYGNHRVQMFDINGRFLNSFGTKGNT 294
Query: 289 DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D F + V NGN+ V + N R+QVF
Sbjct: 295 DSHFDLPRSLCVDMNGNLYVAEYGNSRVQVF 325
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 17/94 (18%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------- 96
KIG +G+ G F+ P G+ V ++ I VAD NHRVQ+ FD+ N FL
Sbjct: 240 KIGDKGNAKGQFSSPSGVCVDGNSQIFVADYGNHRVQM----FDI--NGRFLNSFGTKGN 293
Query: 97 ----FTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
F PR + V + ++ VA+ N RVQVF+
Sbjct: 294 TDSHFDLPRSLCVDMNGNLYVAEYGNSRVQVFKK 327
>gi|260788710|ref|XP_002589392.1| hypothetical protein BRAFLDRAFT_218155 [Branchiostoma floridae]
gi|229274569|gb|EEN45403.1| hypothetical protein BRAFLDRAFT_218155 [Branchiostoma floridae]
Length = 235
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 121/238 (50%), Gaps = 21/238 (8%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVAD---SSNHRVQV---CFPHFDLKTNCVF 94
+ K G G +P P G++ +IV+A+ +++ + F L C
Sbjct: 10 FRHKFGQYGRQPQDMMGPHGVSADSRGNIVLANLGGTTDGKFLTSGNLMNRFSLGEYC-- 67
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
T P G+AV D +VVAD H V +F++DGT V + G G GQ P+++ V
Sbjct: 68 ---TNPYGLAVQRDGRVVVADPGKHSVFLFEADGTLVKQVGGQGQGEGQFNLPYFVCVDK 124
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ +IV+D +N+RVQ+FD F KFG G + + PH ++ + +++
Sbjct: 125 EDNIIVADKSNNRVQVFD-------KSLNFKHKFGQNGRQPQDMWAPHGVSADSRGNLVL 177
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
++ + ++Q+F +G +++ S+G +L P GVAV + G++ V D+G++ I+ +
Sbjct: 178 ANRSGKKLQVFCPDGTWVSNISSDGD---KLNLPHGVAVTEDGHVFVTDTGDHCIRKY 232
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 112/221 (50%), Gaps = 16/221 (7%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G++ +IV+A+ F + G + +F S+G +P+ +AV RV+
Sbjct: 27 PHGVSADSRGNIVLANLGGTTDGKFLTSGNLMNRF-SLGEYC---TNPYGLAVQRDGRVV 82
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D H V +F ++DGT V + G G GQ P+++ V + +IV+D +N
Sbjct: 83 VADPGKHSVFLF-------EADGTLVKQVGGQGQGEGQFNLPYFVCVDKEDNIIVADKSN 135
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
+RVQ+FD + FG G + + P GV+ D +G + + + ++Q+F PDG ++
Sbjct: 136 NRVQVFDKSLNFKHKFGQNGRQPQDMWAPHGVSADSRGNLVLANRSGKKLQVFCPDGTWV 195
Query: 280 RAFGCWGSGDGEFKGL-EGVAVMSNGNILVCDRENHRIQVF 319
S DG+ L GVAV +G++ V D +H I+ +
Sbjct: 196 SNI----SSDGDKLNLPHGVAVTEDGHVFVTDTGDHCIRKY 232
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 121 VQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQS 180
VQVF D F KFG G + + PH ++ + +++++
Sbjct: 1 VQVFDKDLNFRHKFGQYGRQPQDMMGPHGVSADSRGNIVLANLG---------------- 44
Query: 181 DGTFVGKFGSMGNKAGQLE------HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
GT GKF + GN + +P+ +AV RV+V+D H V +F+ +G ++
Sbjct: 45 -GTTDGKFLTSGNLMNRFSLGEYCTNPYGLAVQRDGRVVVADPGKHSVFLFEADGTLVKQ 103
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
G +G EGQ P V VD + I V D NNR+Q+F F FG G +
Sbjct: 104 VGGQGQGEGQFNLPYFVCVDKEDNIIVADKSNNRVQVFDKSLNFKHKFGQNGRQPQDMWA 163
Query: 295 LEGVAVMSNGNILVCDRENHRIQVF 319
GV+ S GN+++ +R ++QVF
Sbjct: 164 PHGVSADSRGNLVLANRSGKKLQVF 188
>gi|291228759|ref|XP_002734345.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 741
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 132/280 (47%), Gaps = 22/280 (7%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW---PRG 102
G GS G F +P GI + D V AD+SN RV + + F F P
Sbjct: 477 GRDGSGEGEFNFPHGITIDKDGRYVTADNSNSRVHIVTEDGRSCKSITFTEFKQNFRPFD 536
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVS 161
IA+ N + D+ N+++ V +S G + FG +L+ P +A+S + V V+
Sbjct: 537 IAISCGNEYFMTDAGNNQIVVAESSGDLLRCFGH-----KELKSPRGLAISPIDGAVHVA 591
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
+ +++ V+I + DG V FG G+ GQ P+ I + + VSD NHR
Sbjct: 592 NFSSNTVEI-------YTQDGEHVDSFGGSGSGDGQFMGPNDIDIDAQGVIFVSDYCNHR 644
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
VQ+F+ N +V+ G E EG+L +P G+AV + + + D +RI +T GQFL
Sbjct: 645 VQVFNSNHQVVRIIGCEDHNEGRLCYPLGIAVCNNTLVYISDE-KHRILSYTYSGQFLCR 703
Query: 282 FGCWGSGDGEFKGLEGVAVMSNG--NILVCDRENHRIQVF 319
C G +A+ + ++V D NH ++VF
Sbjct: 704 VDCDVDG---LSYPHSIALTNEDTPKLVVADTHNHCLKVF 740
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 101/191 (52%), Gaps = 15/191 (7%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+ G G+ G+ PH I + R + +D++N RV I +GR +S TF
Sbjct: 472 LIKTHGRDGSGEGEFNFPHGITIDKDGRYVTADNSNSRVHIVTEDGRSCKS-ITF----- 525
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
+ Q P IA+S N ++D+ N+++ + + +G ++ FG + +LK PR
Sbjct: 526 ---TEFKQNFRPFDIAISCGNEYFMTDAGNNQIVVAESSGDLLRCFGHK-----ELKSPR 577
Query: 250 GVAVDD-QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
G+A+ G + V + +N ++I+T DG+ + +FG GSGDG+F G + + + G I V
Sbjct: 578 GLAISPIDGAVHVANFSSNTVEIYTQDGEHVDSFGGSGSGDGQFMGPNDIDIDAQGVIFV 637
Query: 309 CDRENHRIQVF 319
D NHR+QVF
Sbjct: 638 SDYCNHRVQVF 648
>gi|225175595|ref|ZP_03729589.1| NHL repeat containing protein [Dethiobacter alkaliphilus AHT 1]
gi|225168924|gb|EEG77724.1| NHL repeat containing protein [Dethiobacter alkaliphilus AHT 1]
Length = 332
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 26/218 (11%)
Query: 111 IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
+ V+D++N RVQVF+ DGT + KFG G GQ +P+ I + + V V+D + +Q
Sbjct: 84 VYVSDTNNWRVQVFEEDGTPITKFGERGGDPGQFYYPYGIVIGPDSNVYVADMYSDIIQ- 142
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
VF DG ++G+F +K L P + + + R+ V++ N +V IFD+N
Sbjct: 143 ------VFTPDGEYIGRFADEYSKTDYLSGPAGMHLDDRGRLFVANVNTGKVSIFDINSE 196
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD-GQFLRAFGCWGSGD 289
+ + + G + P V VD G+I V D+G R+ +++PD + +R GS D
Sbjct: 197 ELL---NTVTVSGDVFAPNDVTVDSDGFIYVVDTGGQRVVVYSPDTSRPVRIIN--GSSD 251
Query: 290 GEFKGLEGVAVMSNGN--------ILVCDRENHRIQVF 319
G G A +SN I+V +H I F
Sbjct: 252 G-----RGAATLSNPRGIGIRGDWIMVVSNLSHTIHAF 284
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 120/264 (45%), Gaps = 29/264 (10%)
Query: 69 IVVADSSNHRVQVCFPHFDLKTNCVFL---------AFTWPRGIAVGPDNSIVVADSSNH 119
+ V+D++N RVQV F+ + F +P GI +GPD+++ VAD +
Sbjct: 84 VYVSDTNNWRVQV----FEEDGTPITKFGERGGDPGQFYYPYGIVIGPDSNVYVADMYSD 139
Query: 120 RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ 179
+QVF DG ++G+F +K L P + + + R+ V++ N +V IFD+N
Sbjct: 140 IIQVFTPDGEYIGRFADEYSKTDYLSGPAGMHLDDRGRLFVANVNTGKVSIFDINSEELL 199
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG----RVITSF 235
+ T +G + P+ + V + + V D+ RV ++ + R+I
Sbjct: 200 NTVTV----------SGDVFAPNDVTVDSDGFIYVVDTGGQRVVVYSPDTSRPVRIING- 248
Query: 236 GSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL 295
S+G L PRG+ + +I V + ++ I F DG AFG G +F
Sbjct: 249 SSDGRGAATLSNPRGIGIRGD-WIMVVSNLSHTIHAFHKDGTEDFAFGSQGDAQNQFMHP 307
Query: 296 EGVAVMSNGNILVCDRENHRIQVF 319
G+ + G +L+ D R+ V+
Sbjct: 308 NGLFIDGRGRMLITDTIGARVAVY 331
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 13/186 (6%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
+G G+ A L P + N RV VSD+NN RVQ VF+ DGT + KFG G
Sbjct: 63 YGDFGDNA--LHKPMFATFGN-GRVYVSDTNNWRVQ-------VFEEDGTPITKFGERGG 112
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
GQ +P+ I + + V V+D + +Q+F +G I F E S+ L P G+ +
Sbjct: 113 DPGQFYYPYGIVIGPDSNVYVADMYSDIIQVFTPDGEYIGRFADEYSKTDYLSGPAGMHL 172
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
DD+G + V + ++ IF + + L + G+ V V S+G I V D
Sbjct: 173 DDRGRLFVANVNTGKVSIFDINSEELL---NTVTVSGDVFAPNDVTVDSDGFIYVVDTGG 229
Query: 314 HRIQVF 319
R+ V+
Sbjct: 230 QRVVVY 235
>gi|260832514|ref|XP_002611202.1| hypothetical protein BRAFLDRAFT_169578 [Branchiostoma floridae]
gi|229296573|gb|EEN67212.1| hypothetical protein BRAFLDRAFT_169578 [Branchiostoma floridae]
Length = 202
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 91/184 (49%), Gaps = 13/184 (7%)
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P +AV + I+V D ++ +Q DG+F K +G + P +A
Sbjct: 2 TFNAPALLAVTAEGEIIVTDHDSNSLQFLDKDGSFKKKV-DLGFR------PWCVAALTN 54
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+V+ + HR+ +F V G KFG G QL Y+ V+++ +IV
Sbjct: 55 GEPLVT-GDRHRIHVF-----VLSPSGDVFLKFGDKGQGQQQLGPFLYVTVNSSKEIIVL 108
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D NH+++IFDV GR + + GS GS GQL +P V D + I V DS N+R+ +F D
Sbjct: 109 DWGNHKIEIFDVIGRRLYTLGSHGSGPGQLHYPCSVITDSEDNIIVADSWNDRVSVFNKD 168
Query: 276 GQFL 279
G F+
Sbjct: 169 GTFI 172
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 14/214 (6%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIV 112
G F P +AV + I+V D ++ +Q K V L F P +A + +
Sbjct: 1 GTFNAPALLAVTAEGEIIVTDHDSNSLQFLDKDGSFKKK-VDLGFR-PWCVAALTNGEPL 58
Query: 113 VADSSNHRVQVF--QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
V HR+ VF G KFG G QL Y+ V+++ +IV D NH+++I
Sbjct: 59 VT-GDRHRIHVFVLSPSGDVFLKFGDKGQGQQQLGPFLYVTVNSSKEIIVLDWGNHKIEI 117
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
FDV GR + GS G+ GQL +P + + + +IV+DS N RV +F+ +G
Sbjct: 118 FDVIGRRLYT-------LGSHGSGPGQLHYPCSVITDSEDNIIVADSWNDRVSVFNKDGT 170
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDS 264
I + EE L P+G+A+ G + V +S
Sbjct: 171 FIGH--ALTREEHGLNRPQGLAMTHDGRLVVSES 202
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 17/180 (9%)
Query: 142 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP 201
G P +AV+ +IV+D +++ +Q D DG+F K +G + P
Sbjct: 1 GTFNAPALLAVTAEGEIIVTDHDSNSLQFLD-------KDGSFKKKV-DLGFR------P 46
Query: 202 HYIAVSNTNRVIVSDSNNHRVQIFDVN--GRVITSFGSEGSEEGQLKFPRGVAVDDQGYI 259
+A +V+ + HR+ +F ++ G V FG +G + QL V V+ I
Sbjct: 47 WCVAALTNGEPLVT-GDRHRIHVFVLSPSGDVFLKFGDKGQGQQQLGPFLYVTVNSSKEI 105
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V D GN++I+IF G+ L G GSG G+ V S NI+V D N R+ VF
Sbjct: 106 IVLDWGNHKIEIFDVIGRRLYTLGSHGSGPGQLHYPCSVITDSEDNIIVADSWNDRVSVF 165
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 39 RRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT 98
RRL + +GS GS PG +P + +++I+VADS N RV V F+ + A T
Sbjct: 123 RRL-YTLGSHGSGPGQLHYPCSVITDSEDNIIVADSWNDRVSV----FNKDGTFIGHALT 177
Query: 99 -------WPRGIAVGPDNSIVVADS 116
P+G+A+ D +VV++S
Sbjct: 178 REEHGLNRPQGLAMTHDGRLVVSES 202
>gi|260792082|ref|XP_002591056.1| hypothetical protein BRAFLDRAFT_69390 [Branchiostoma floridae]
gi|229276256|gb|EEN47067.1| hypothetical protein BRAFLDRAFT_69390 [Branchiostoma floridae]
Length = 648
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 117/271 (43%), Gaps = 58/271 (21%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM---GNK------------- 140
F +P G+ V + I VA+ N R+QVF GTFV +F ++ G K
Sbjct: 385 FKYPNGVTVSDEGEIFVAEGGNQRIQVFTLQGTFVHQFPTVVSGGQKMCPNDVTMDAEGN 444
Query: 141 ---AGQLEHPHYIAVSNTNRVIVSDSNNHRVQ---------------------------I 170
G+ E + N ++ ++Q +
Sbjct: 445 LWVVGETESAAFAVQYNKQGRVLRKFEQKKIQAREWYHGVAMDIVRNHILITKATAQDLV 504
Query: 171 FDVNGRV--FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
+++G V F+ DGT V G + +++ Y V ++VSD NH V +++
Sbjct: 505 SNLHGEVLVFRPDGTIVQTVGQLQG----MKYSRYTTVDGKGNILVSDCYNHCVFVYNEG 560
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G+ + FG EGS EGQL +P G+ D G I V DSGN+R+++F G+FL+
Sbjct: 561 GQFLFQFGGEGSGEGQLGYPCGIYTDRAGNIIVADSGNSRVEMFDNTGRFLKHI------ 614
Query: 289 DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ VA+ G ++V D +N ++ +F
Sbjct: 615 TTDMDNPCAVAMAPQGQLVVTDIKNDKVSIF 645
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRG 102
F+ G GS G +P GI +I+VADS N RV++ F + + P
Sbjct: 565 FQFGGEGSGEGQLGYPCGIYTDRAGNIIVADSGNSRVEM-FDNTGRFLKHITTDMDNPCA 623
Query: 103 IAVGPDNSIVVADSSNHRVQVFQS 126
+A+ P +VV D N +V +F S
Sbjct: 624 VAMAPQGQLVVTDIKNDKVSIFHS 647
>gi|290977087|ref|XP_002671270.1| predicted protein [Naegleria gruberi]
gi|284084837|gb|EFC38526.1| predicted protein [Naegleria gruberi]
Length = 1095
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 145/309 (46%), Gaps = 46/309 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRV-QVCFPHFDLKTNCVFLAFTW-------------- 99
+ P+G A+ +I +AD+SNHRV ++ + + T +F +
Sbjct: 387 LSKPKGAALDSLGNIYIADTSNHRVRKISYLDGTITTIAGTGSFGYNGDGILATSAQVNK 446
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTF-----VGKFGSMGN----KAGQLEHPHYI 150
P GIA +I +ADS N+R++ ++GT VG G G+ +L P +
Sbjct: 447 PTGIAFDSIGNIYIADSGNNRIRKILTNGTILTIAGVGLGGYNGDGIPATNAKLNSPVSV 506
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGS--MGNKAGQLEHPHYIAVSN 208
V + + V ++D+ NHR+++ +G + G VG G + N +L +P IA +
Sbjct: 507 TVDSNDLVYITDTYNHRIRLILPSGNISTVIGGSVGFNGDYLLPNNT-KLNYPQSIAFDS 565
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGS-------EGSE--EGQLKFPRGVAVDDQGYI 259
+N + ++D+ N+R++ NG +IT G+ +G E QLK+P+G+A+D +
Sbjct: 566 SNNMYIADTYNNRIRKMFTNGTIITVAGTGTLGYNGDGIEATNAQLKYPQGIAIDGDELL 625
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE---------FKGLEGVAVMSNGNILVCD 310
+ DS NNRI+ +G G G E GV + NG I+V D
Sbjct: 626 -IADSYNNRIRRVLSNGNITTITGTGDLGYSEDGTTASASKINNPSGVILRRNGEIIVID 684
Query: 311 RENHRIQVF 319
+N R++V
Sbjct: 685 SDNSRLRVI 693
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 135/306 (44%), Gaps = 51/306 (16%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT--------------NCVFLAFTWPRGI 103
P A+GPD S+ +ADS+NHR++ FP+ + T + P +
Sbjct: 57 PASSALGPDGSLFIADSNNHRIRQVFPNGTITTIAGTGFSGYNGDGIEAIRAQLKNPVSV 116
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGT-----------FVGKFGSMGNKAGQLEHPHYIAV 152
V ++ +D+ N+R++ ++GT F G G N A + +P+ + +
Sbjct: 117 VVNSMGEVLFSDNGNNRIRKILTNGTIITIVGTGVDSFSGDNGLARNAA--INYPYGLTL 174
Query: 153 SNTNRVIVSDSNNHRV-QIFDVNGRVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVSNT 209
++ ++ +D NN+R+ Q+F+ NG + G+ + +M + L +AV
Sbjct: 175 NSKEELLFTDVNNNRIRQVFN-NGTIITVAGSNSQGYNGDNMKATSATLFLSFGVAVDTK 233
Query: 210 NRVIVSDSNNHRVQIFDVNGRVIT---------SFGSEGSEEGQLKFPRGVAVDDQGYIS 260
+ + ++D+NN+R++ +NG ++T + ++ P GVAV G +
Sbjct: 234 DNIYIADTNNNRIRKVLLNGTIVTIAGTGTGDYYGDGGLATLAKINSPYGVAVSSLGEVY 293
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGC--WGSGDGEFKGLEGVA-------VMSNGNILVCDR 311
DS NRI+ + +G G +G D L +A + ++ + D+
Sbjct: 294 FSDS--NRIRKVSTNGTITTFAGTSLYGFTDNTTVNLATLASPELMNFAKNTSDLYIADK 351
Query: 312 ENHRIQ 317
NHRI+
Sbjct: 352 GNHRIR 357
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 137/306 (44%), Gaps = 51/306 (16%)
Query: 60 GIAVGPDNSIVVADSSNHRVQVCFPHFDLKT--------------NCVFLAFTWPRGIAV 105
G+AV ++I +AD++N+R++ + + T P G+AV
Sbjct: 227 GVAVDTKDNIYIADTNNNRIRKVLLNGTIVTIAGTGTGDYYGDGGLATLAKINSPYGVAV 286
Query: 106 GPDNSIVVADSSNHRVQVFQSDGT---FVGK--FGSMGNKA---GQLEHPHYIAVS-NTN 156
+ +DS +R++ ++GT F G +G N L P + + NT+
Sbjct: 287 SSLGEVYFSDS--NRIRKVSTNGTITTFAGTSLYGFTDNTTVNLATLASPELMNFAKNTS 344
Query: 157 RVIVSDSNNHRVQIFDVNGRVF----QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
+ ++D NHR++ NG + Q ++ G+ ++ ++ L P A+ + +
Sbjct: 345 DLYIADKGNHRIRKIS-NGFITTIAGQGSPSYCGE--NVDSRLSALSKPKGAALDSLGNI 401
Query: 213 IVSDSNNHRV-QIFDVNGRVIT-----SFGSEG----SEEGQLKFPRGVAVDDQGYISVG 262
++D++NHRV +I ++G + T SFG G + Q+ P G+A D G I +
Sbjct: 402 YIADTSNHRVRKISYLDGTITTIAGTGSFGYNGDGILATSAQVNKPTGIAFDSIGNIYIA 461
Query: 263 DSGNNRIQIFTPDGQFLRAFGC---WGSGDG------EFKGLEGVAVMSNGNILVCDREN 313
DSGNNRI+ +G L G +GDG + V V SN + + D N
Sbjct: 462 DSGNNRIRKILTNGTILTIAGVGLGGYNGDGIPATNAKLNSPVSVTVDSNDLVYITDTYN 521
Query: 314 HRIQVF 319
HRI++
Sbjct: 522 HRIRLI 527
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 38/251 (15%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT--------------NCVFLAFTWPRGI 103
P GIA +I +ADS N+R++ + + T P +
Sbjct: 447 PTGIAFDSIGNIYIADSGNNRIRKILTNGTILTIAGVGLGGYNGDGIPATNAKLNSPVSV 506
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDG---TFVGKFGSMGNKAG-------QLEHPHYIAVS 153
V ++ + + D+ NHR+++ G T +G GS+G +L +P IA
Sbjct: 507 TVDSNDLVYITDTYNHRIRLILPSGNISTVIG--GSVGFNGDYLLPNNTKLNYPQSIAFD 564
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA--GQLEHPHYIAVSNTNR 211
++N + ++D+ N+R++ NG + GT + G +A QL++P IA+ + +
Sbjct: 565 SSNNMYIADTYNNRIRKMFTNGTIITVAGTGTLGYNGDGIEATNAQLKYPQGIAI-DGDE 623
Query: 212 VIVSDSNNHRVQIFDVNGRV--ITSFGSEG-SEEG------QLKFPRGVAVDDQGYISVG 262
++++DS N+R++ NG + IT G G SE+G ++ P GV + G I V
Sbjct: 624 LLIADSYNNRIRRVLSNGNITTITGTGDLGYSEDGTTASASKINNPSGVILRRNGEIIVI 683
Query: 263 DSGNNRIQIFT 273
DS N+R+++ +
Sbjct: 684 DSDNSRLRVIS 694
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 135 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK 194
G + KA L +P A+ + ++DSNNHR++ NG + GT + G +
Sbjct: 46 GGLAIKA-SLANPASSALGPDGSLFIADSNNHRIRQVFPNGTITTIAGTGFSGYNGDGIE 104
Query: 195 A--GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT-------SFGSEG--SEEG 243
A QL++P + V++ V+ SD+ N+R++ NG +IT SF + +
Sbjct: 105 AIRAQLKNPVSVVVNSMGEVLFSDNGNNRIRKILTNGTIITIVGTGVDSFSGDNGLARNA 164
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG-DGE-FKGLE----- 296
+ +P G+ ++ + + D NNRI+ +G + G G +G+ K
Sbjct: 165 AINYPYGLTLNSKEELLFTDVNNNRIRQVFNNGTIITVAGSNSQGYNGDNMKATSATLFL 224
Query: 297 --GVAVMSNGNILVCDRENHRIQ 317
GVAV + NI + D N+RI+
Sbjct: 225 SFGVAVDTKDNIYIADTNNNRIR 247
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 26/153 (16%)
Query: 189 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS-------EGSE 241
G + KA L +P A+ + ++DSNNHR++ NG + T G+ +G E
Sbjct: 46 GGLAIKA-SLANPASSALGPDGSLFIADSNNHRIRQVFPNGTITTIAGTGFSGYNGDGIE 104
Query: 242 --EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVA 299
QLK P V V+ G + D+GNNRI+ +G + G+G F G G+A
Sbjct: 105 AIRAQLKNPVSVVVNSMGEVLFSDNGNNRIRKILTNGTIITIV---GTGVDSFSGDNGLA 161
Query: 300 ------------VMSNGNILVCDRENHRI-QVF 319
+ S +L D N+RI QVF
Sbjct: 162 RNAAINYPYGLTLNSKEELLFTDVNNNRIRQVF 194
>gi|260792768|ref|XP_002591386.1| hypothetical protein BRAFLDRAFT_86893 [Branchiostoma floridae]
gi|229276591|gb|EEN47397.1| hypothetical protein BRAFLDRAFT_86893 [Branchiostoma floridae]
Length = 611
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 105/229 (45%), Gaps = 51/229 (22%)
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG-------------------- 138
+P G+AV I VAD N R+QVF GTFV +F ++
Sbjct: 339 FPVGVAVSDQGEIFVADRGNQRIQVFTLQGTFVRQFPTVTLCNEKMTPDDVALDGEGNLW 398
Query: 139 ---------------NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG-------- 175
NK G++ + + R + D+ + + I G
Sbjct: 399 VVGTHLKFSNFAVQYNKQGRVLRKFNLQKTGFARGVAVDTRRNHILITQTTGVWDNRHGE 458
Query: 176 -RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
VF+ DGT V ++G K G + HP YI V ++VSDS N+ V +++ +G+ +
Sbjct: 459 VLVFRPDGTLV---RTVGRKQG-MNHPWYITVDGEGNILVSDSRNNCVYVYNEDGQFLFQ 514
Query: 235 FGSE---GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
FG E GS +GQL +PRG+ D G I V D GN+R+++F G+F++
Sbjct: 515 FGDEVTQGSGDGQLFYPRGICTDSAGNIIVADWGNSRVEMFDKTGRFIK 563
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 118/292 (40%), Gaps = 76/292 (26%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC---------FPHFDL-------- 88
G GS G +P G+AV I VAD N R+QV FP L
Sbjct: 328 GGEGSGTGQLHFPVGVAVSDQGEIFVADRGNQRIQVFTLQGTFVRQFPTVTLCNEKMTPD 387
Query: 89 -------------KTNCVFLAFT-------------------WPRGIAVGP-DNSIVVA- 114
T+ F F + RG+AV N I++
Sbjct: 388 DVALDGEGNLWVVGTHLKFSNFAVQYNKQGRVLRKFNLQKTGFARGVAVDTRRNHILITQ 447
Query: 115 -----DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 169
D+ + V VF+ DGT V ++G K G + HP YI V ++VSDS N+ V
Sbjct: 448 TTGVWDNRHGEVLVFRPDGTLV---RTVGRKQG-MNHPWYITVDGEGNILVSDSRNNCVY 503
Query: 170 IFDVNGRVFQSDGTFVGKFG---SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
+++ DG F+ +FG + G+ GQL +P I + +IV+D N RV++FD
Sbjct: 504 VYN-------EDGQFLFQFGDEVTQGSGDGQLFYPRGICTDSAGNIIVADWGNSRVEMFD 556
Query: 227 VNGRVITSFGSEGSEEGQLKF------PRGVAVDDQGYISVGDSGNNRIQIF 272
GR I ++ S ++ P GVA+ QG + + N I
Sbjct: 557 KTGRFIKHIATDTSLLIKVVLNLKSRDPWGVAIGPQGQLVMTVVSENATHII 608
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 97/233 (41%), Gaps = 51/233 (21%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG--------------RVFQ 179
FG G+ GQL P +AVS+ + V+D N R+Q+F + G ++
Sbjct: 327 FGGEGSGTGQLHFPVGVAVSDQGEIFVADRGNQRIQVFTLQGTFVRQFPTVTLCNEKMTP 386
Query: 180 SDGTFVGK--------------FGSMGNKAGQLEHPHYIAVSNTNR-VIVSDSNNH---- 220
D G+ F NK G++ + + R V V NH
Sbjct: 387 DDVALDGEGNLWVVGTHLKFSNFAVQYNKQGRVLRKFNLQKTGFARGVAVDTRRNHILIT 446
Query: 221 -----------RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
V +F +G ++ + G + + P + VD +G I V DS NN +
Sbjct: 447 QTTGVWDNRHGEVLVFRPDGTLVRTVGRKQG----MNHPWYITVDGEGNILVSDSRNNCV 502
Query: 270 QIFTPDGQFLRAFG---CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++ DGQFL FG GSGDG+ G+ S GNI+V D N R+++F
Sbjct: 503 YVYNEDGQFLFQFGDEVTQGSGDGQLFYPRGICTDSAGNIIVADWGNSRVEMF 555
>gi|260820806|ref|XP_002605725.1| hypothetical protein BRAFLDRAFT_77992 [Branchiostoma floridae]
gi|229291060|gb|EEN61735.1| hypothetical protein BRAFLDRAFT_77992 [Branchiostoma floridae]
Length = 636
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 20/275 (7%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIA 104
+G +GS F WP +AV D +IVV D N R+Q F D + + L+F +P +A
Sbjct: 380 VGKKGSGDTEFNWPTSLAVTTDGNIVVTDRDNKRLQ--FLDKDGSSKKIDLSF-YPLCVA 436
Query: 105 VGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 164
V + ++V H ++V G + +AV R+IV+
Sbjct: 437 VLTNGELLVT-GDGHSIRVLDRHGRREEHIIQVAGATDIKATTRGVAVDRFGRIIVTIGT 495
Query: 165 NHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 224
Q+F V G + KF G GQ + ++ V+++N++IVS+ N+ ++I
Sbjct: 496 ----QMF-----VISPSGDIIRKFEEKGQ--GQQQSALHVTVNSSNQIIVSNMRNNYLKI 544
Query: 225 FDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGC 284
+D GR + + GS G GQL +P V D + + V DS N+R+ +F+ DG F+R
Sbjct: 545 YDPAGRHLFTTGSFGWGPGQLNYPADVITDSEDNMLVADSVNHRVSLFSEDGVFIRHVLT 604
Query: 285 WGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F G+A M +G ++V DR H I+ F
Sbjct: 605 QEKHGLNFPM--GLA-MHDGQLVVSDR--HSIKFF 634
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L+ G GSGD EF +AV ++GNI+V DR+N R+Q
Sbjct: 376 LLKTVGKKGSGDTEFNWPTSLAVTTDGNIVVTDRDNKRLQFL 417
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 21/101 (20%)
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
++ + G +GS + + +P +AV G I V D N R+Q DG + D
Sbjct: 376 LLKTVGKKGSGDTEFNWPTSLAVTTDGNIVVTDRDNKRLQFLDKDGSSKKI-------DL 428
Query: 291 EFKGLEGVAVMSNGNILVC-------------DRENHRIQV 318
F L VAV++NG +LV RE H IQV
Sbjct: 429 SFYPL-CVAVLTNGELLVTGDGHSIRVLDRHGRREEHIIQV 468
>gi|358635389|dbj|BAL22686.1| hypothetical protein AZKH_0340 [Azoarcus sp. KH32C]
Length = 318
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 122/273 (44%), Gaps = 18/273 (6%)
Query: 52 PGCFTWPRGIAVGPDNSIVVADSSNHRVQVC-FPHFDLKTNCVFLA---FTWPRGIAVGP 107
P P+ + D I V D S V V P +LK + + F P GIA+
Sbjct: 48 PNVLQRPQAVVSDRDGRIFVTDVSRAAVYVFDKPAGELKIWGLAVGLRRFIAPIGIALAE 107
Query: 108 DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSNNH 166
+ V D+ V DGT V G G L+ P +A +T + VSD+ H
Sbjct: 108 GGGVWVTDAELQIVAHLGPDGTPVATIGK-----GMLQRPTGLARDPSTGLLYVSDTYAH 162
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
+++F +GR+ + G G G+ P ++A+++ R+ V+D+ N RVQ+
Sbjct: 163 DIKVFTPDGRLEKI-------IGERGEGPGEFNFPTHLALAH-GRLYVTDTMNSRVQVIP 214
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
++G G G G L P+GVAVD + I V +S + + ++ G+FL G G
Sbjct: 215 LDGGETQIIGKRGLYYGNLVRPKGVAVDSENNIYVVESYYDNLLVYNEAGEFLMPIGGVG 274
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F GV V S + V D N RI +F
Sbjct: 275 QTTGKFYLPAGVWVDSFDRVFVADTFNGRITIF 307
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 8/142 (5%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV------ 93
RL+ IG RG PG F +P +A+ + V D+ N RVQV P +T +
Sbjct: 172 RLEKIIGERGEGPGEFNFPTHLALA-HGRLYVTDTMNSRVQVI-PLDGGETQIIGKRGLY 229
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
+ P+G+AV +N+I V +S + V+ G F+ G +G G+ P + V
Sbjct: 230 YGNLVRPKGVAVDSENNIYVVESYYDNLLVYNEAGEFLMPIGGVGQTTGKFYLPAGVWVD 289
Query: 154 NTNRVIVSDSNNHRVQIFDVNG 175
+ +RV V+D+ N R+ IF G
Sbjct: 290 SFDRVFVADTFNGRITIFQYLG 311
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 14/183 (7%)
Query: 53 GCFTWPRGIAVGPDNSIV-VADSSNHRVQVCFPHFDLKTNCVFLA-----FTWPRGIAVG 106
G P G+A P ++ V+D+ H ++V P L+ F +P +A+
Sbjct: 137 GMLQRPTGLARDPSTGLLYVSDTYAHDIKVFTPDGRLEKIIGERGEGPGEFNFPTHLALA 196
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
+ V D+ N RVQV DG G G G L P +AV + N + V +S
Sbjct: 197 -HGRLYVTDTMNSRVQVIPLDGGETQIIGKRGLYYGNLVRPKGVAVDSENNIYVVES--- 252
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
+D N V+ G F+ G +G G+ P + V + +RV V+D+ N R+ IF
Sbjct: 253 ---YYD-NLLVYNEAGEFLMPIGGVGQTTGKFYLPAGVWVDSFDRVFVADTFNGRITIFQ 308
Query: 227 VNG 229
G
Sbjct: 309 YLG 311
>gi|340376328|ref|XP_003386685.1| PREDICTED: tripartite motif-containing protein 71-like [Amphimedon
queenslandica]
Length = 284
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 78/134 (58%), Gaps = 2/134 (1%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
F S G+ +GQ + P +A+ + V V+D +NHR+Q F +G+ + FG++GS G L
Sbjct: 151 FLSEGSASGQFQSPRDVAIDSQGLVYVADWDNHRIQKFSQDGKFVGQFGNKGSGSGLLYS 210
Query: 248 PRGVAVDDQ--GYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
P G+ +D++ G + V + GNNRI +FT G F +FG WGS F+ G+A +G
Sbjct: 211 PIGITIDNEATGLVYVSEWGNNRILVFTSKGVFTNSFGRWGSNIDNFQHPTGLAFDKDGF 270
Query: 306 ILVCDRENHRIQVF 319
+ CD N R+ V+
Sbjct: 271 MYACDSGNGRLVVY 284
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSS 117
P G AV S+ DSS V F L F PR +A+ + VAD
Sbjct: 126 PAGEAVSFSLSLEAPDSSLSSVSPFF----LSEGSASGQFQSPRDVAIDSQGLVYVADWD 181
Query: 118 NHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN--TNRVIVSDSNNHRVQIFDVNG 175
NHR+Q F DG FVG+FG+ G+ +G L P I + N T V VS+ N+R+
Sbjct: 182 NHRIQKFSQDGKFVGQFGNKGSGSGLLYSPIGITIDNEATGLVYVSEWGNNRI------- 234
Query: 176 RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
VF S G F FG G+ +HP +A + DS N R+ ++
Sbjct: 235 LVFTSKGVFTNSFGRWGSNIDNFQHPTGLAFDKDGFMYACDSGNGRLVVY 284
>gi|223935789|ref|ZP_03627704.1| NHL repeat containing protein [bacterium Ellin514]
gi|223895390|gb|EEF61836.1| NHL repeat containing protein [bacterium Ellin514]
Length = 755
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 112/254 (44%), Gaps = 32/254 (12%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGT---FVGKFGSMGNKAG-----QLEHPH 148
F WP+G AV ++ V+D+ NH ++ + GT G GS G G Q P
Sbjct: 370 FYWPKGTAVDASGNVFVSDTFNHTIRKITAAGTVSTLAGTAGSSGTNNGVGGGAQFYAPQ 429
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGT--FVGKFGSMGNKAGQLEHPHYIAV 206
IAV V+D+ N+ ++ G V GT G+ G+ A Q P +A+
Sbjct: 430 GIAVDTGGNAYVADTANNVIRKVTSGGTVTTLAGTAGVEGQGDGTGSNA-QFSGPQAVAL 488
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFG-------------SEGSEEGQLKFPRGVAV 253
V VSD+ NH ++ G V T G + G+ + P G+AV
Sbjct: 489 DGAANVYVSDTGNHTIRKISPGGAVTTFAGFPGHPGNLDSNMDNNGTNTARFYSPSGLAV 548
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQF--LRAF-GCWGSGDG-----EFKGLEGVAVMSNGN 305
D G + V D+GN+ I+ T DG L G WG+ DG F EG+++ S GN
Sbjct: 549 DSSGNVYVADTGNHTIRKITADGSVSTLAGLPGVWGNADGTNRDARFFQPEGISIDSQGN 608
Query: 306 ILVCDRENHRIQVF 319
+ V D NH +++
Sbjct: 609 LFVMDSGNHTMRML 622
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 130/299 (43%), Gaps = 41/299 (13%)
Query: 55 FTWPRGIAVGPDNSIV-VADSSNHRVQVCFPHFDLKTNC-------VFLAFTWPRGIAVG 106
F P +AV + S++ VAD+ NH ++ + T F P+GIAVG
Sbjct: 157 FYEPEAVAVNGNGSLIYVADTWNHEIRQVTSAGVVTTLAGTPGVIGTGSLFYQPQGIAVG 216
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGN--------KAGQLEHPHYIAVSNTNRV 158
D +I VAD+ N ++V G+ GS GN A Q P +AV+ V
Sbjct: 217 SDGNIYVADTGNGTIRVIPPGGSVTTLAGSPGNYGSTNGTGSAAQFYQPMGVAVAANGTV 276
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAG-----QLEHPHYIAVSNTNRVI 213
V+D+ NH ++ G V T G G+ G+K G + P +AVS + V
Sbjct: 277 YVADNLNHTIRAVTSGGVVT----TLAGLAGNYGSKDGTGSNARFYAPQGVAVSGS-TVF 331
Query: 214 VSDSNNHRVQIFDVNGRVIT-----SFGSEGSEEGQLKF--PRGVAVDDQGYISVGDSGN 266
V D+ N ++ G V T S G+ G KF P+G AVD G + V D+ N
Sbjct: 332 VVDTGNGTIRQISSGGAVTTLAGSASIGNADGTGGSAKFYWPKGTAVDASGNVFVSDTFN 391
Query: 267 NRIQIFTPDGQFLRAFGCWGS--------GDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
+ I+ T G G GS G +F +G+AV + GN V D N+ I+
Sbjct: 392 HTIRKITAAGTVSTLAGTAGSSGTNNGVGGGAQFYAPQGIAVDTGGNAYVADTANNVIR 450
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 125/300 (41%), Gaps = 43/300 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQ----------VCFPHFDLKTNCVFLA--FTWPRG 102
F P G+AV ++ VAD++NH ++ N A F P+G
Sbjct: 48 FNLPGGVAVDKTGNLYVADTANHTIRKISGGVVSTFAGLAGVSGSANGKGSAARFNQPQG 107
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKA--------GQLEHPHYIAVS- 153
+AV + + VAD+ NH ++ DGT G+ GN Q P +AV+
Sbjct: 108 VAVDTNGIVYVADTGNHIIRKIALDGTVSTLAGAAGNPGTLNATGTNAQFYEPEAVAVNG 167
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
N + + V+D+ NH ++ G V T G G +G + P IAV + +
Sbjct: 168 NGSLIYVADTWNHEIRQVTSAGVVT----TLAGTPGVIGTGS-LFYQPQGIAVGSDGNIY 222
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGS--------EEGQLKFPRGVAVDDQGYISVGDSG 265
V+D+ N +++ G V T GS G+ Q P GVAV G + V D+
Sbjct: 223 VADTGNGTIRVIPPGGSVTTLAGSPGNYGSTNGTGSAAQFYQPMGVAVAANGTVYVADNL 282
Query: 266 NNRIQIFTPDG---QFLRAFGCWGSGDG-----EFKGLEGVAVMSNGNILVCDRENHRIQ 317
N+ I+ T G G +GS DG F +GVAV S + V D N I+
Sbjct: 283 NHTIRAVTSGGVVTTLAGLAGNYGSKDGTGSNARFYAPQGVAV-SGSTVFVVDTGNGTIR 341
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 133/311 (42%), Gaps = 48/311 (15%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT-----------NCVF--LAFTWPR 101
F WP+G AV ++ V+D+ NH ++ + T N V F P+
Sbjct: 370 FYWPKGTAVDASGNVFVSDTFNHTIRKITAAGTVSTLAGTAGSSGTNNGVGGGAQFYAPQ 429
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKA--------GQLEHPHYIAVS 153
GIAV + VAD++N+ ++ S GT G+ G + Q P +A+
Sbjct: 430 GIAVDTGGNAYVADTANNVIRKVTSGGTVTTLAGTAGVEGQGDGTGSNAQFSGPQAVALD 489
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM-------GNKAGQLEHPHYIAV 206
V VSD+ NH ++ G V G F G G++ G + P +AV
Sbjct: 490 GAANVYVSDTGNHTIRKISPGGAVTTFAG-FPGHPGNLDSNMDNNGTNTARFYSPSGLAV 548
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG--------SEEGQLKFPRGVAVDDQGY 258
++ V V+D+ NH ++ +G V T G G + + + P G+++D QG
Sbjct: 549 DSSGNVYVADTGNHTIRKITADGSVSTLAGLPGVWGNADGTNRDARFFQPEGISIDSQGN 608
Query: 259 ISVGDSGNNRIQIF----------TPDGQFLRAFGCWGSGDG-EFKGLEGVAVMSNGNIL 307
+ V DSGN+ +++ T GQ G+G+G +F G+ + ++G
Sbjct: 609 LFVMDSGNHTMRMLIASGTNWIVTTIAGQPDLGGAADGTGNGAQFYYPGGLGLNNSGFFA 668
Query: 308 VCDRENHRIQV 318
V D N+ I+
Sbjct: 669 VADSGNNTIRA 679
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 51/281 (18%)
Query: 41 LQFKIGSRGSEPGC-----FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL 95
L GS G+ G F P+GIAV + VAD++N+ ++ + T
Sbjct: 406 LAGTAGSSGTNNGVGGGAQFYAPQGIAVDTGGNAYVADTANNVIRKVTSGGTVTTLAGTA 465
Query: 96 A-------------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDG---TFVGKFGSMGN 139
F+ P+ +A+ ++ V+D+ NH ++ G TF G G GN
Sbjct: 466 GVEGQGDGTGSNAQFSGPQAVALDGAANVYVSDTGNHTIRKISPGGAVTTFAGFPGHPGN 525
Query: 140 KAGQLEH----------PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
+++ P +AV ++ V V+D+ NH ++ +G V T G G
Sbjct: 526 LDSNMDNNGTNTARFYSPSGLAVDSSGNVYVADTGNHTIRKITADGSVS----TLAGLPG 581
Query: 190 SMGNKAG-----QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR--VITSFGSE---- 238
GN G + P I++ + + V DS NH +++ +G ++T+ +
Sbjct: 582 VWGNADGTNRDARFFQPEGISIDSQGNLFVMDSGNHTMRMLIASGTNWIVTTIAGQPDLG 641
Query: 239 GSEEG-----QLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
G+ +G Q +P G+ +++ G+ +V DSGNN I+ P
Sbjct: 642 GAADGTGNGAQFYYPGGLGLNNSGFFAVADSGNNTIRAGVP 682
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 88/194 (45%), Gaps = 15/194 (7%)
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK--AG 196
N + + P +AV T + V+D+ NH ++ ++G V + G GS K A
Sbjct: 43 NSSARFNLPGGVAVDKTGNLYVADTANHTIR--KISGGVVSTFAGLAGVSGSANGKGSAA 100
Query: 197 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGS--------EEGQLKFP 248
+ P +AV V V+D+ NH ++ ++G V T G+ G+ Q P
Sbjct: 101 RFNQPQGVAVDTNGIVYVADTGNHIIRKIALDGTVSTLAGAAGNPGTLNATGTNAQFYEP 160
Query: 249 RGVAVDDQG-YISVGDSGNNRIQIFTPDGQFLRAFGCWGS-GDGE-FKGLEGVAVMSNGN 305
VAV+ G I V D+ N+ I+ T G G G G G F +G+AV S+GN
Sbjct: 161 EAVAVNGNGSLIYVADTWNHEIRQVTSAGVVTTLAGTPGVIGTGSLFYQPQGIAVGSDGN 220
Query: 306 ILVCDRENHRIQVF 319
I V D N I+V
Sbjct: 221 IYVADTGNGTIRVI 234
>gi|119485311|ref|ZP_01619639.1| hypothetical protein L8106_09226 [Lyngbya sp. PCC 8106]
gi|119457067|gb|EAW38193.1| hypothetical protein L8106_09226 [Lyngbya sp. PCC 8106]
Length = 393
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 119 HRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSNNHRVQIFDVNGRV 177
+ V +F +G ++G GS G G+ + P + S T + V D N RV ++D G
Sbjct: 86 NEVSIFTPEGEYIGGVGSGGTGPGEFDEPGALEFSPTTGNLYVGDVFNLRVNVYDPEGNY 145
Query: 178 FQS--DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSF 235
Q+ DG F G + P I N V V D +N R+ + +G +I +
Sbjct: 146 IQTIADGEFGGLI-----EGRAFFGPSGITFDAENNVYVGDFSNDRILKINGSGEIIDTI 200
Query: 236 GSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
G+ GSE GQ + P G+ + G I V D NNR+Q+ PDG L AFG G+ G+F+
Sbjct: 201 GTPGSEPGQFQGPAGIRISSVSGNIYVADQFNNRVQVLDPDGNPLLAFGMQGTEPGQFEQ 260
Query: 295 LEGVAVMSNGNILVCDRENHRIQVF 319
G+ + NI V D N R+QVF
Sbjct: 261 PIGLEIDEEENIYVADSINSRVQVF 285
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 132/294 (44%), Gaps = 37/294 (12%)
Query: 15 LLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADS 74
LL L+S +G + T ++ L+ R +IG G PG P+G++V + +
Sbjct: 15 LLAGSLIS-LGAIATEVKAVTLEFER---QIGEPGFAPGQLFVPQGVSVQESTGNIYVGN 70
Query: 75 SNHRVQVCFPHFDLKTNCVFLA------------------FTWPRGIAVGPDN-SIVVAD 115
R +F++ F P + P ++ V D
Sbjct: 71 GRGRNPDGTTNFEVGNEVSIFTPEGEYIGGVGSGGTGPGEFDEPGALEFSPTTGNLYVGD 130
Query: 116 SSNHRVQVFQSDGTFV-----GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
N RV V+ +G ++ G+FG + + P I N V V D +N R I
Sbjct: 131 VFNLRVNVYDPEGNYIQTIADGEFGGL-IEGRAFFGPSGITFDAENNVYVGDFSNDR--I 187
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNG 229
+NG G + G+ G++ GQ + P I +S+ + + V+D N+RVQ+ D +G
Sbjct: 188 LKINGS-----GEIIDTIGTPGSEPGQFQGPAGIRISSVSGNIYVADQFNNRVQVLDPDG 242
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
+ +FG +G+E GQ + P G+ +D++ I V DS N+R+Q+F +G L FG
Sbjct: 243 NPLLAFGMQGTEPGQFEQPIGLEIDEEENIYVADSINSRVQVFDKEGNLLTVFG 296
>gi|444916089|ref|ZP_21236213.1| hypothetical protein D187_08495 [Cystobacter fuscus DSM 2262]
gi|444712768|gb|ELW53683.1| hypothetical protein D187_08495 [Cystobacter fuscus DSM 2262]
Length = 2336
Score = 94.0 bits (232), Expect = 8e-17, Method: Composition-based stats.
Identities = 95/303 (31%), Positives = 138/303 (45%), Gaps = 49/303 (16%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSS 117
P +AV PD ++ +AD+ N+RV+ + T A+ PR +AVGPD S+ VA S
Sbjct: 987 PHDVAVAPDGTLYIADTFNNRVRRVNTDGIISTLPGSDAYQ-PRSVAVGPDGSVYVAHSD 1045
Query: 118 NHRVQVFQSDGT---FVGKFGSMGN---------KAGQLEHPHYIAVSNTNRVIVSDSNN 165
H ++ DGT F G G N + +L +P IA+ + ++D +N
Sbjct: 1046 LHCIRKVLPDGTASTFAGTCGFSSNGSSGDGGPATSARLSYPRGIALGKEGNLYIADFDN 1105
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMG-------NKAGQLEHPHYIAVSNTNRVIVSDSN 218
RV+ G + T GK + G A L P +AV V VSDS
Sbjct: 1106 DRVRYVTPEGIIH----TLAGKPNARGFCGDNGLASAACLNGPWDVAVGKAGDVYVSDSA 1161
Query: 219 NHRVQIFDVNGRVITSFGS--EGSEEG------------QLKFPRGVAVDDQGYISVGD- 263
NHRV+ NGR+ T G+ +GS EG L P+G+A+D +G + + D
Sbjct: 1162 NHRVRRIGSNGRITTVAGTGDDGSLEGISIGDGGPAQQALLSAPKGLALDSEGNLYIADH 1221
Query: 264 -SGNNRIQ----IFTPDGQFLRAFGCWGSG----DGEFKGLEGVAVMSNGNILVCDRENH 314
S R+ I T GQ L A G G+G G+F G+AV +G+ V D NH
Sbjct: 1222 FSRVRRVDANGIITTYAGQ-LEASGFSGNGTPALQGKFDSPTGLAVGPDGSCYVSDEWNH 1280
Query: 315 RIQ 317
++
Sbjct: 1281 SVR 1283
Score = 87.8 bits (216), Expect = 5e-15, Method: Composition-based stats.
Identities = 85/274 (31%), Positives = 119/274 (43%), Gaps = 49/274 (17%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT---NCVFLA--------------FTWP 100
PR +AVGPD S+ VA S H ++ P T C F + ++P
Sbjct: 1028 PRSVAVGPDGSVYVAHSDLHCIRKVLPDGTASTFAGTCGFSSNGSSGDGGPATSARLSYP 1087
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDG---TFVGKFGSMG-------NKAGQLEHPHYI 150
RGIA+G + ++ +AD N RV+ +G T GK + G A L P +
Sbjct: 1088 RGIALGKEGNLYIADFDNDRVRYVTPEGIIHTLAGKPNARGFCGDNGLASAACLNGPWDV 1147
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM-------GNKAGQ--LEHP 201
AV V VSDS NHRV+ NGR+ GT G GS+ G A Q L P
Sbjct: 1148 AVGKAGDVYVSDSANHRVRRIGSNGRITTVAGT--GDDGSLEGISIGDGGPAQQALLSAP 1205
Query: 202 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT--------SFGSEGSEEGQLKF--PRGV 251
+A+ + + ++D + RV+ D NG + T F G+ Q KF P G+
Sbjct: 1206 KGLALDSEGNLYIADHFS-RVRRVDANGIITTYAGQLEASGFSGNGTPALQGKFDSPTGL 1264
Query: 252 AVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
AV G V D N+ ++ + G FLR W
Sbjct: 1265 AVGPDGSCYVSDEWNHSVRRVSYPGAFLRENEAW 1298
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 39/212 (18%)
Query: 132 GKFGSMGN----KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK 187
G FGS+G+ ++ +L +PH +AV+ + ++D+ N+RV+ + +G + G+
Sbjct: 968 GDFGSIGDGAAARSARLWNPHDVAVAPDGTLYIADTFNNRVRRVNTDGIISTLPGS---- 1023
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS---------- 237
P +AV V V+ S+ H ++ +G T G+
Sbjct: 1024 ---------DAYQPRSVAVGPDGSVYVAHSDLHCIRKVLPDGTASTFAGTCGFSSNGSSG 1074
Query: 238 --EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG-------CWGSG 288
+ +L +PRG+A+ +G + + D N+R++ TP+G G C +G
Sbjct: 1075 DGGPATSARLSYPRGIALGKEGNLYIADFDNDRVRYVTPEGIIHTLAGKPNARGFCGDNG 1134
Query: 289 DGEFKGLEG---VAVMSNGNILVCDRENHRIQ 317
L G VAV G++ V D NHR++
Sbjct: 1135 LASAACLNGPWDVAVGKAGDVYVSDSANHRVR 1166
>gi|260782164|ref|XP_002586161.1| hypothetical protein BRAFLDRAFT_109857 [Branchiostoma floridae]
gi|229271254|gb|EEN42172.1| hypothetical protein BRAFLDRAFT_109857 [Branchiostoma floridae]
Length = 580
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 118/266 (44%), Gaps = 54/266 (20%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV---- 152
F P G+ V + I VAD N R+QVF GTFV +F ++ ++E PH +A+
Sbjct: 323 FQGPYGVTVSDEGEIFVADYGNQRIQVFTLQGTFVRQFPTVVPGEKKME-PHDVAMDGEG 381
Query: 153 ------------------------------SNTNRVIVSDSNNHRVQIFDVNGR------ 176
+ +R + D+ + + I G
Sbjct: 382 NLWVGHTGSADVAVQYNKQGRVLRKFDLQRTGRHRGVAVDTRRNHILITQTTGDRDNRHG 441
Query: 177 ---VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT 233
VF+ DGT V ++G + G ++ P YI V ++VSD N V + D +G+ +
Sbjct: 442 EVLVFRPDGTLVK---TVGQQQG-MKFPRYITVDREGNILVSDWYNDCVFVCDKDGQFLF 497
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
FG +GS EGQL PRG+ D G + V D N +++F G+FL+ + D ++
Sbjct: 498 QFGGKGSGEGQLNDPRGICTDRAGNVIVADQNNKCLEMFDKTGKFLKHI----TTDMQYP 553
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
VA+ G ++V D N+ + +F
Sbjct: 554 C--AVAMAPQGQLVVTDVMNYSVSIF 577
>gi|241755432|ref|XP_002401313.1| conserved hypothetical protein [Ixodes scapularis]
gi|215508410|gb|EEC17864.1| conserved hypothetical protein [Ixodes scapularis]
Length = 405
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
K+G G Q + P +A ++V+D NNHRV + + FQS G G
Sbjct: 273 KYGFDGPLWKQFDSPRGVAFIGDGHMVVTDFNNHRVLVIRPD---FQS----ASYLGLEG 325
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
G + P +AV ++V+DS NHRVQ+F +G+++ FG +G E GQL+ P G+
Sbjct: 326 KDPGLFQRPQGLAVDLEGHIVVADSRNHRVQVFRPDGKLLAWFGQQGKERGQLELPSGIC 385
Query: 253 VDDQGYISVGDSGNNRIQIF 272
+ G I V D GNNR+Q+F
Sbjct: 386 IAPDGRIVVVDFGNNRVQVF 405
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 77/133 (57%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
K+G G Q + P +A ++V+D NNHRV + + + + G EG + G +
Sbjct: 273 KYGFDGPLWKQFDSPRGVAFIGDGHMVVTDFNNHRVLVIRPDFQSASYLGLEGKDPGLFQ 332
Query: 247 FPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNI 306
P+G+AVD +G+I V DS N+R+Q+F PDG+ L FG G G+ + G+ + +G I
Sbjct: 333 RPQGLAVDLEGHIVVADSRNHRVQVFRPDGKLLAWFGQQGKERGQLELPSGICIAPDGRI 392
Query: 307 LVCDRENHRIQVF 319
+V D N+R+QVF
Sbjct: 393 VVVDFGNNRVQVF 405
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 71/125 (56%), Gaps = 11/125 (8%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--------FTWPRGIAVG 106
F PRG+A D +VV D +NHRV V P F + +L F P+G+AV
Sbjct: 284 FDSPRGVAFIGDGHMVVTDFNNHRVLVIRPDFQSAS---YLGLEGKDPGLFQRPQGLAVD 340
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
+ IVVADS NHRVQVF+ DG + FG G + GQLE P I ++ R++V D N+
Sbjct: 341 LEGHIVVADSRNHRVQVFRPDGKLLAWFGQQGKERGQLELPSGICIAPDGRIVVVDFGNN 400
Query: 167 RVQIF 171
RVQ+F
Sbjct: 401 RVQVF 405
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F PRG+A D +VV D +NHRV V + D G G G + P +AV
Sbjct: 284 FDSPRGVAFIGDGHMVVTDFNNHRVLVIRPDFQSASYLGLEGKDPGLFQRPQGLAVDLEG 343
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++V+DS NHRVQ VF+ DG + FG G + GQLE P I ++ R++V D
Sbjct: 344 HIVVADSRNHRVQ-------VFRPDGKLLAWFGQQGKERGQLELPSGICIAPDGRIVVVD 396
Query: 217 SNNHRVQIF 225
N+RVQ+F
Sbjct: 397 FGNNRVQVF 405
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 46/93 (49%), Gaps = 21/93 (22%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW----- 99
+G G +PG F P+G+AV + IVVADS NHRVQV P L W
Sbjct: 321 LGLEGKDPGLFQRPQGLAVDLEGHIVVADSRNHRVQVFRPDGKL--------LAWFGQQG 372
Query: 100 --------PRGIAVGPDNSIVVADSSNHRVQVF 124
P GI + PD IVV D N+RVQVF
Sbjct: 373 KERGQLELPSGICIAPDGRIVVVDFGNNRVQVF 405
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%)
Query: 228 NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGS 287
R T +G +G Q PRGVA G++ V D N+R+ + PD Q G G
Sbjct: 267 TARSSTKYGFDGPLWKQFDSPRGVAFIGDGHMVVTDFNNHRVLVIRPDFQSASYLGLEGK 326
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G F+ +G+AV G+I+V D NHR+QVF
Sbjct: 327 DPGLFQRPQGLAVDLEGHIVVADSRNHRVQVF 358
>gi|296132639|ref|YP_003639886.1| NHL repeat containing protein [Thermincola potens JR]
gi|296031217|gb|ADG81985.1| NHL repeat containing protein [Thermincola potens JR]
Length = 340
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 48/258 (18%)
Query: 108 DNSIVVADSSNHRVQVFQSDGTFVGKFG------SMGNKAGQLEHPHYIAVSNTNRVIVS 161
D+ I V D+ N R+ +F G F+ + G + + G L+ P I V N + V+
Sbjct: 82 DDRIYVVDAGNQRIAIFDYSGKFISEVGRPKKGVPISRQPGVLQAPSGITVVN-GEIYVT 140
Query: 162 DSNNHRVQIFDVNGR---------------VFQSDGTF---------------VGK---- 187
D++ + +F+ G+ +F DG F GK
Sbjct: 141 DTSTRLIHVFNSEGKFLRYFAEKKPKVPVNIFYKDGKFYVLDNGTMTVQVYDQTGKSLLV 200
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSF-GSEGSEEGQLK 246
FG G+K G+ +P+ + V N N + V+DSNN+R+QIFD G+ G + + G
Sbjct: 201 FGKQGDKPGEFYYPYSVYVDNNNEIYVADSNNNRIQIFDAKGKFKKELKGEDINGSGGYS 260
Query: 247 FPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE-----FKGLEGVAVM 301
PRG+A D +G + ++ +N I I +G+ L F + + E K V +
Sbjct: 261 VPRGIAFDSKGNLYTAETMSNDISIANKEGKVLSRF-SYAEPETETTVDALKAPTSVFID 319
Query: 302 SNGNILVCDRENHRIQVF 319
N + V + N RI V+
Sbjct: 320 DNQRLYVTELANSRILVY 337
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 22/231 (9%)
Query: 51 EPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVG---- 106
+PG P GI V + I V D+S + V + FL + + V
Sbjct: 120 QPGVLQAPSGITV-VNGEIYVTDTSTRLIHV------FNSEGKFLRYFAEKKPKVPVNIF 172
Query: 107 -PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
D V D+ VQV+ G + FG G+K G+ +P+ + V N N + V+DSNN
Sbjct: 173 YKDGKFYVLDNGTMTVQVYDQTGKSLLVFGKQGDKPGEFYYPYSVYVDNNNEIYVADSNN 232
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
+R+QIFD G+ F+ + G N +G P IA + + +++ ++ + I
Sbjct: 233 NRIQIFDAKGK-FKKELK-----GEDINGSGGYSVPRGIAFDSKGNLYTAETMSNDISIA 286
Query: 226 DVNGRVITSFGSEGSEE----GQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+ G+V++ F E LK P V +DD + V + N+RI ++
Sbjct: 287 NKEGKVLSRFSYAEPETETTVDALKAPTSVFIDDNQRLYVTELANSRILVY 337
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 28 GTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD 87
GT Y Q + G +G +PG F +P + V +N I VADS+N+R+Q+
Sbjct: 184 GTMTVQVYDQTGKSLLVFGKQGDKPGEFYYPYSVYVDNNNEIYVADSNNNRIQIFDAKGK 243
Query: 88 LKTNCVFL------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG----SM 137
K ++ PRGIA ++ A++ ++ + + +G + +F
Sbjct: 244 FKKELKGEDINGSGGYSVPRGIAFDSKGNLYTAETMSNDISIANKEGKVLSRFSYAEPET 303
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 173
L+ P + + + R+ V++ N R+ ++ +
Sbjct: 304 ETTVDALKAPTSVFIDDNQRLYVTELANSRILVYQI 339
>gi|260832938|ref|XP_002611414.1| hypothetical protein BRAFLDRAFT_117226 [Branchiostoma floridae]
gi|229296785|gb|EEN67424.1| hypothetical protein BRAFLDRAFT_117226 [Branchiostoma floridae]
Length = 985
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGK--FGSMGNKAGQLEHPHYIAVSN 154
F+ P +AV + IVV + +N +++ DG+F K M L + + +
Sbjct: 735 FSTPYPLAVTAEGDIVVTEINNSGLKILDKDGSFRKKVDLWFMPECVAALTNGELLVTGD 794
Query: 155 TNRVIVSDSNNHRVQIFDVNGR---------------------------VFQSDGTFVGK 187
+R+ V D ++I V G V G + K
Sbjct: 795 GHRIHVLDKQGRELRIIQVTGAAETDKTTKGIAVDGLGRIIVTIGYQVFVLSRSGDVMLK 854
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG G QL ++ V+++N++IVSD +NH V+IFD GR + + GS G E GQL +
Sbjct: 855 FGDKGQVQQQLGPFLHVVVNSSNQIIVSDHDNHDVKIFDPAGRHLFTSGSFGFEPGQLNY 914
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
P GV D I V ++ N+R+ +F+PDG F+R
Sbjct: 915 PSGVITDSDDNIIVAETYNHRVSLFSPDGAFIR 947
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 18/156 (11%)
Query: 19 LLVSGIGQVGTTPRSQYLQKRR---LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSS 75
+ V G+G++ T Q R + K G +G + V N I+V+D
Sbjct: 826 IAVDGLGRIIVTIGYQVFVLSRSGDVMLKFGDKGQVQQQLGPFLHVVVNSSNQIIVSDHD 885
Query: 76 NHRVQVCFPHFDLKTNCVFLA---------FTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
NH V++ FD +F + +P G+ D++I+VA++ NHRV +F
Sbjct: 886 NHDVKI----FDPAGRHLFTSGSFGFEPGQLNYPSGVITDSDDNIIVAETYNHRVSLFSP 941
Query: 127 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
DG F+ + L HP +A+S+ ++VSD
Sbjct: 942 DGAFIRHV--LTRDEHGLLHPGGLALSHDGHLVVSD 975
>gi|347967663|ref|XP_312621.4| AGAP002344-PA [Anopheles gambiae str. PEST]
gi|333468357|gb|EAA07480.4| AGAP002344-PA [Anopheles gambiae str. PEST]
Length = 1087
Score = 94.0 bits (232), Expect = 9e-17, Method: Composition-based stats.
Identities = 75/264 (28%), Positives = 114/264 (43%), Gaps = 54/264 (20%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G +G D IVVAD++NHR+++F+ +GTF FG G + GQL +P +AV T+
Sbjct: 831 FNSPHGFCLGVDEEIVVADTNNHRIEIFEKNGTFKFSFGVPGKEEGQLFYPRKVAVMRTS 890
Query: 157 -RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG----------SMGNKA---------- 195
+ +V D N R ++ ++F +G F+ K ++ NK
Sbjct: 891 AKFVVCDRGNERSRM-----QIFSKNGHFIKKIAIRYIDIVAGLAVTNKGLIVAVDSVSP 945
Query: 196 --------GQLEH----------PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS 237
G L H P IA++ T+ V D H V +F G GS
Sbjct: 946 TVFIICEDGNLIHWFDCSDFMREPSDIAINGTD-FFVCDFKGHCVAVFSEEGTFKYRIGS 1004
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI--FTPDGQFLRAFGCWGSGDGEFKGL 295
E FP G+ + D G + +GDS NR + ++ DGQ F C GL
Sbjct: 1005 EKIT----CFPNGIDISDAGDVLIGDSHGNRFHVACYSKDGQLQSEFECPYVKVSRCCGL 1060
Query: 296 EGVAVMSNGNILVCDRENHRIQVF 319
+ + S G ++ + NH + V
Sbjct: 1061 K---ITSEGYVVTLAKNNHHVLVL 1081
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 89/190 (46%), Gaps = 20/190 (10%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
KFGS+G GQ PH + ++V+D+NNHR++IF+ N GTF FG G
Sbjct: 820 KFGSLGQTKGQFNSPHGFCLGVDEEIVVADTNNHRIEIFEKN-------GTFKFSFGVPG 872
Query: 193 NKAGQLEHPHYIAVSNTN-RVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
+ GQL +P +AV T+ + +V D N R+QIF NG I +
Sbjct: 873 KEEGQLFYPRKVAVMRTSAKFVVCDRGNERSRMQIFSKNGHFIKKIAIR-----YIDIVA 927
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
G+AV ++G I DS + + I DG + F C +F ++ + VC
Sbjct: 928 GLAVTNKGLIVAVDSVSPTVFIICEDGNLIHWFDC-----SDFMREPSDIAINGTDFFVC 982
Query: 310 DRENHRIQVF 319
D + H + VF
Sbjct: 983 DFKGHCVAVF 992
Score = 89.0 bits (219), Expect = 3e-15, Method: Composition-based stats.
Identities = 47/111 (42%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 173 VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
VNGR + KFGS+G GQ PH + ++V+D+NNHR++IF+ NG
Sbjct: 806 VNGRTKATPMQIRTKFGSLGQTKGQFNSPHGFCLGVDEEIVVADTNNHRIEIFEKNGTFK 865
Query: 233 TSFGSEGSEEGQLKFPRGVAV-DDQGYISVGDSGN--NRIQIFTPDGQFLR 280
SFG G EEGQL +PR VAV V D GN +R+QIF+ +G F++
Sbjct: 866 FSFGVPGKEEGQLFYPRKVAVMRTSAKFVVCDRGNERSRMQIFSKNGHFIK 916
>gi|260808706|ref|XP_002599148.1| hypothetical protein BRAFLDRAFT_81815 [Branchiostoma floridae]
gi|229284424|gb|EEN55160.1| hypothetical protein BRAFLDRAFT_81815 [Branchiostoma floridae]
Length = 610
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 94/185 (50%), Gaps = 28/185 (15%)
Query: 99 WPRGIAVGPDN-------SIVVADSSNHR--VQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
W RG+AV DN ++ D S VQV++ DG G +G + G +++P +
Sbjct: 441 WIRGVAV--DNRRKHILFTLTTGDRSKRHGLVQVYKPDGKLQG---VLGQQQG-MKYPQH 494
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
I V ++VSD +NH + +F+ DG F KFG G+ GQL P I +
Sbjct: 495 ITVDEEGNILVSDYDNHCIYVFN-------DDGEFQFKFGCRGSGEGQLNRPCGICTDES 547
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
+IV+D NN RV++FD GR + ++ ++ P+ VAV QG + V D N+ +
Sbjct: 548 GNIIVADRNNSRVEMFDKTGRFLKHITTD------IEDPKDVAVAPQGQVVVTDYSNHTV 601
Query: 270 QIFTP 274
+FTP
Sbjct: 602 TVFTP 606
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 135/317 (42%), Gaps = 48/317 (15%)
Query: 32 RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN 91
+ ++L +R G RG E G F P G+ V I VAD N R+QV F L+
Sbjct: 307 KEEHLYQR---MTFGGRGEETGKFDNPSGVTV-IKGRIFVADFWNQRIQV----FTLQGG 358
Query: 92 CV--FLAFTWPRGIAVGPDNSIV--VADSSNHRVQVFQSDGTF---VGKFGSMGNKAGQL 144
V F + PDN + +AD VF + F VG+ + A Q
Sbjct: 359 YVDQFQTTVSSDEQKMNPDNVAMSQLADVPRED-DVFYVEPVFLWMVGRTKCDASFALQF 417
Query: 145 EHPHYIAVSNTNR--------------VIVSDSNNHRVQIFDVNGR--------VFQSDG 182
+ Y+ + R V V + H + R V++ DG
Sbjct: 418 RYSGYLFTKDGERESKIDLQRTGWIRGVAVDNRRKHILFTLTTGDRSKRHGLVQVYKPDG 477
Query: 183 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
G +G + G +++P +I V ++VSD +NH + +F+ +G FG GS E
Sbjct: 478 KLQG---VLGQQQG-MKYPQHITVDEEGNILVSDYDNHCIYVFNDDGEFQFKFGCRGSGE 533
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMS 302
GQL P G+ D+ G I V D N+R+++F G+FL+ + + + VAV
Sbjct: 534 GQLNRPCGICTDESGNIIVADRNNSRVEMFDKTGRFLKHIT------TDIEDPKDVAVAP 587
Query: 303 NGNILVCDRENHRIQVF 319
G ++V D NH + VF
Sbjct: 588 QGQVVVTDYSNHTVTVF 604
>gi|260818148|ref|XP_002603946.1| hypothetical protein BRAFLDRAFT_102372 [Branchiostoma floridae]
gi|229289271|gb|EEN59957.1| hypothetical protein BRAFLDRAFT_102372 [Branchiostoma floridae]
Length = 519
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 128/316 (40%), Gaps = 45/316 (14%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + FK GS GS G P GI +I+V+D+ N RV++ F +
Sbjct: 215 YNEDGEFLFKFGSYGSGEGQLDRPHGICTDRSGNIIVSDTGNSRVEM-FDKTGKFLKHIA 273
Query: 95 LAFTWPRGIAVGPDNSI----------------------VVADSSNHRVQVFQSDGTFVG 132
P+ +A+ P + VA + V G
Sbjct: 274 TDMKGPQAVAMAPQGQLGTFVREFPTVVSGEEKISRLPQDVAMDGEGNLWVVGETGPESA 333
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR---------VFQSDGT 183
F NK G++ + + +R + D+ + + I G VF+ DGT
Sbjct: 334 DFAVQYNKQGRVLRKFDLQKTGFSRGVAVDTRRNHILITQTTGDGGNNHGEVLVFRPDGT 393
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
V G G P YI V ++VSD V +++V+G+ + F SEGS++G
Sbjct: 394 LVKTVGQQQGMKG----PQYITVDGEGNILVSDK---YVYVYNVDGQFLCQFVSEGSDQG 446
Query: 244 QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
+L P+G+ D G I V DSGN R+++F G+ L+ + VA+ +
Sbjct: 447 ELLSPKGICTDRTGNIIVADSGNRRVEMFDKTGKLLKHITT------DMTEPTAVAMATQ 500
Query: 304 GNILVCDRENHRIQVF 319
G ++V D E + + +F
Sbjct: 501 GQLVVTDVEKNTVSIF 516
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 41/243 (16%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+ I V + +I+V D N+ + V+ DG F+ KFGS G+ GQL+ PH I + +I
Sbjct: 191 PQYITVDEEGNILVPDGYNNCIYVYNEDGEFLFKFGSYGSGEGQLDRPHGICTDRSGNII 250
Query: 160 VSDSNNHRVQIFDVNGRVFQ---SD---------------GTFVGKFGSMGNKAGQLEH- 200
VSD+ N RV++FD G+ + +D GTFV +F ++ + ++
Sbjct: 251 VSDTGNSRVEMFDKTGKFLKHIATDMKGPQAVAMAPQGQLGTFVREFPTVVSGEEKISRL 310
Query: 201 PHYIAVSNTNRVIV-----SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD 255
P +A+ + V +S + VQ ++ GRV+ F + + F RGVAVD
Sbjct: 311 PQDVAMDGEGNLWVVGETGPESADFAVQ-YNKQGRVLRKFDLQ-----KTGFSRGVAVDT 364
Query: 256 -QGYI----SVGDSGNN--RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
+ +I + GD GNN + +F PDG ++ G KG + + V GNILV
Sbjct: 365 RRNHILITQTTGDGGNNHGEVLVFRPDGTLVKTVGQQQG----MKGPQYITVDGEGNILV 420
Query: 309 CDR 311
D+
Sbjct: 421 SDK 423
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 15/229 (6%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS-MGNKAGQLEHPHYIAVSNTNRVIV 160
G+ V + I V+D+ N R+QVF GT V +F + M + HP +A+ + V
Sbjct: 38 GVTVSDEGEIFVSDNQNERIQVFNLQGTLVKQFPTVMAGEEKISRHPQDVAMDGEGNLWV 97
Query: 161 S-----DSNNHRVQIFDVNGRVFQSDGTF----VGKFGSMGNKAGQLEHPHYIAVSNTNR 211
DS + VQ R ++ + K G A H I T
Sbjct: 98 VGETGIDSVDFAVQYNFFYKRGYKQSRVLRKFDLQKAGVEIGVAVDTRRNHIIIAQTTRI 157
Query: 212 VIVSDSNNH-RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
D N H V ++ +G ++ + G + +K P+ + VD++G I V D NN I
Sbjct: 158 GAPKDLNFHGEVLVYRPDGTLVKTVGQQQG----MKHPQYITVDEEGNILVPDGYNNCIY 213
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++ DG+FL FG +GSG+G+ G+ +GNI+V D N R+++F
Sbjct: 214 VYNEDGEFLFKFGSYGSGEGQLDRPHGICTDRSGNIIVSDTGNSRVEMF 262
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 15/165 (9%)
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
++I ++ T R+ N ++ V++ DGT V ++G + G ++HP YI V
Sbjct: 147 NHIIIAQTTRIGAPKDLNFHGEVL-----VYRPDGTLVK---TVGQQQG-MKHPQYITVD 197
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
++V D N+ + +++ +G + FGS GS EGQL P G+ D G I V D+GN+
Sbjct: 198 EEGNILVPDGYNNCIYVYNEDGEFLFKFGSYGSGEGQLDRPHGICTDRSGNIIVSDTGNS 257
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRE 312
R+++F G+FL+ + KG + VA+ G + RE
Sbjct: 258 RVEMFDKTGKFLKHIAT------DMKGPQAVAMAPQGQLGTFVRE 296
>gi|260824806|ref|XP_002607358.1| hypothetical protein BRAFLDRAFT_69764 [Branchiostoma floridae]
gi|229292705|gb|EEN63368.1| hypothetical protein BRAFLDRAFT_69764 [Branchiostoma floridae]
Length = 1436
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 118/270 (43%), Gaps = 57/270 (21%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV------------------------- 131
F P G+ V + I VAD N ++QVF GTFV
Sbjct: 1175 FNGPSGVTVSDEGEIFVADYWNQKIQVFTLQGTFVHQFPTVVSGEERVTPQDVAMDREGN 1234
Query: 132 ---------GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR------ 176
+F NK G + + + +R + D+ + + I G
Sbjct: 1235 LWVVGDTRSAEFAVQYNKQGSVLRNFDLQKTGWHRGVAVDTRRNHILITQTTGDWHGEVF 1294
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
V+ DGT V ++G + G +++P YI V ++VSD NNH V +++ +G+ + FG
Sbjct: 1295 VYSPDGTLVR---TVGQQQG-MKYPQYITVDRKGNILVSDCNNHCVYVYNEDGQYLFQFG 1350
Query: 237 S-EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL 295
S E + + QL PRG+ + G I V DSGNNR+++F G+FL+ +
Sbjct: 1351 SFERNGQDQLYKPRGICTESAGNIIVADSGNNRVEMFDKTGKFLKFI------TTDMGKP 1404
Query: 296 EGVAVMSNGNILVCD------RENHRIQVF 319
VA+ +NG ++V + NH + +F
Sbjct: 1405 WAVAMTTNGQLVVTLWDKYFFKNNHTVCIF 1434
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+FG +GS GQ P GV V D+G I V D N +IQ+FT G F+ F SG+ E
Sbjct: 1164 TFGGKGSGTGQFNGPSGVTVSDEGEIFVADYWNQKIQVFTLQGTFVHQFPTVVSGE-ERV 1222
Query: 294 GLEGVAVMSNGNILV 308
+ VA+ GN+ V
Sbjct: 1223 TPQDVAMDREGNLWV 1237
>gi|260823250|ref|XP_002604096.1| hypothetical protein BRAFLDRAFT_71615 [Branchiostoma floridae]
gi|229289421|gb|EEN60107.1| hypothetical protein BRAFLDRAFT_71615 [Branchiostoma floridae]
Length = 711
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 29/244 (11%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIV-V 113
F +P G+ V + I VAD N R+QV F L+ V +P ++ G + V
Sbjct: 395 FWYPVGVTVSDEGEIFVADKWNQRIQV----FTLQGTFVR---QFPTVVSGGQKMDLYDV 447
Query: 114 ADSSNHRVQVFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 167
A + V DG+ V +F NK G++ + S R + D+ +
Sbjct: 448 AMDREGNLWVVGCDGSLVSSTTKSDEFAVQYNKQGRVLKKTDLQKSEWIRGVAGDTRRNH 507
Query: 168 VQIFDVNGR-----------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ I G V++SDGT + ++G + G ++ P YI V ++VSD
Sbjct: 508 ILITQTMGEWHYQRHRGKVMVYRSDGTLMK---TVGRQQG-MKEPWYITVDRKGNILVSD 563
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ NH V ++ +G+ + FG EGS EGQL P G+ D G I V D+GN R+++F +
Sbjct: 564 NMNHCVYVYKEDGQFLFQFGGEGSGEGQLYKPHGICTDRAGNIIVADTGNRRVEMFDKNR 623
Query: 277 QFLR 280
+FL+
Sbjct: 624 KFLK 627
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 20/234 (8%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F +P G+ V + I VAD N R+QVF GTFV +F ++ + GQ + +A+
Sbjct: 395 FWYPVGVTVSDEGEIFVADKWNQRIQVFTLQGTFVRQFPTVVS-GGQKMDLYDVAMDREG 453
Query: 157 RVIV-----------SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
+ V + S+ VQ ++ GRV + T + K + AG H I
Sbjct: 454 NLWVVGCDGSLVSSTTKSDEFAVQ-YNKQGRVLKK--TDLQKSEWIRGVAGDTRRNH-IL 509
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG 265
++ T + +V ++ +G ++ + G + +K P + VD +G I V D+
Sbjct: 510 ITQTMGEWHYQRHRGKVMVYRSDGTLMKTVGRQQG----MKEPWYITVDRKGNILVSDNM 565
Query: 266 NNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
N+ + ++ DGQFL FG GSG+G+ G+ GNI+V D N R+++F
Sbjct: 566 NHCVYVYKEDGQFLFQFGGEGSGEGQLYKPHGICTDRAGNIIVADTGNRRVEMF 619
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+FG GS GQ +P GV V D+G I V D N RIQ+FT G F+R F SG G+
Sbjct: 384 TFGGGGSGTGQFWYPVGVTVSDEGEIFVADKWNQRIQVFTLQGTFVRQFPTVVSG-GQKM 442
Query: 294 GLEGVAVMSNGNILV--CD 310
L VA+ GN+ V CD
Sbjct: 443 DLYDVAMDREGNLWVVGCD 461
>gi|148264796|ref|YP_001231502.1| NHL repeat-containing protein [Geobacter uraniireducens Rf4]
gi|146398296|gb|ABQ26929.1| NHL repeat containing protein [Geobacter uraniireducens Rf4]
Length = 347
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 121/273 (44%), Gaps = 30/273 (10%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------AFTWPRGIAVGPDNS 110
P G+ + V D V V D++ FL F P I +
Sbjct: 79 PYGVFCDEKERLFVVDVGASVVHV----MDMRNKEYFLIGKEDKAVFRTPIAITEDEQEN 134
Query: 111 IVVADSSN---HRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI-VSDSNNH 166
+ + DSS +R + + + + F +L P IA + N++I V+D+ H
Sbjct: 135 VYITDSSAGAIYRYSLIRKELSPFVPF--------KLGRPTGIAYNRRNKLIYVTDTAAH 186
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
+V F + DG + G G+ GQ +P + V ++V+D+ N R+Q F
Sbjct: 187 QVIAFGL-------DGMERMRIGVRGDLPGQFNYPTDLFVDAQGSLLVTDALNFRIQRFS 239
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+G+++ FG G G P+GVAVD +G+I V D+ + +QIF G+ L FG G
Sbjct: 240 PDGQLLDVFGRAGDSSGSFAKPKGVAVDSEGHIYVCDALFDAVQIFDGTGRVLLDFGSNG 299
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G+F G+ + I V D N R+QVF
Sbjct: 300 GQEGQFWMPSGIYIDGKDYIYVADTYNRRVQVF 332
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL-----KTNCVFLA 96
+ +IG RG PG F +P + V S++V D+ N R+Q P L + +
Sbjct: 198 RMRIGVRGDLPGQFNYPTDLFVDAQGSLLVTDALNFRIQRFSPDGQLLDVFGRAGDSSGS 257
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P+G+AV + I V D+ VQ+F G + FGS G + GQ P I + +
Sbjct: 258 FAKPKGVAVDSEGHIYVCDALFDAVQIFDGTGRVLLDFGSNGGQEGQFWMPSGIYIDGKD 317
Query: 157 RVIVSDSNNHRVQIF 171
+ V+D+ N RVQ+F
Sbjct: 318 YIYVADTYNRRVQVF 332
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 15/90 (16%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF-------- 97
G G G F P+G+AV + I V D+ VQ+ FD T V L F
Sbjct: 249 GRAGDSSGSFAKPKGVAVDSEGHIYVCDALFDAVQI----FD-GTGRVLLDFGSNGGQEG 303
Query: 98 -TW-PRGIAVGPDNSIVVADSSNHRVQVFQ 125
W P GI + + I VAD+ N RVQVF+
Sbjct: 304 QFWMPSGIYIDGKDYIYVADTYNRRVQVFR 333
>gi|443698497|gb|ELT98473.1| hypothetical protein CAPTEDRAFT_177644 [Capitella teleta]
Length = 576
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 115/246 (46%), Gaps = 29/246 (11%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC----FPHFDLKTNCVFL 95
RL K+ RG++ G F +P D SIVV D +N R+Q+ P L C+
Sbjct: 312 RLLAKVSGRGTKLGKFDYPTNATFVHDGSIVVCDKNNKRLQILDAKGTPQRLLLEGCM-- 369
Query: 96 AFTWPRGIAVGP-DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
PR V P D + V+D V+VF DG V G + + P +A ++
Sbjct: 370 ---KPRRARVCPVDGLLYVSDELASCVRVFTLDGKHVRSIGDT-----EFQCPAGMAFNS 421
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
++++DS V ++ N G+ + +F K + +P+++AV+ +++I+
Sbjct: 422 KGHLVLTDSEKCYVYVYKRN-------GSLITRFFFKFIKDRNMSNPYFVAVNEDDQIII 474
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
SD N V++F + G + + L PRGV VD G I V + +RI ++ P
Sbjct: 475 SDCRNGLVKVFSITGNHLFTIAD-------LVIPRGVCVDPYGNILVAEGDKHRISMYNP 527
Query: 275 DGQFLR 280
G+F++
Sbjct: 528 YGKFMQ 533
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 88/225 (39%), Gaps = 47/225 (20%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG-------------- 175
+ K G K G+ ++P + ++V D NN R+QI D G
Sbjct: 313 LLAKVSGRGTKLGKFDYPTNATFVHDGSIVVCDKNNKRLQILDAKGTPQRLLLEGCMKPR 372
Query: 176 ---------------------RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
RVF DG V G + + P +A ++ +++
Sbjct: 373 RARVCPVDGLLYVSDELASCVRVFTLDGKHVRSIGDT-----EFQCPAGMAFNSKGHLVL 427
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+DS V ++ NG +IT F + ++ + P VAV++ I + D N +++F+
Sbjct: 428 TDSEKCYVYVYKRNGSLITRFFFKFIKDRNMSNPYFVAVNEDDQIIISDCRNGLVKVFSI 487
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G L + GV V GNILV + + HRI ++
Sbjct: 488 TGNHLFTI-------ADLVIPRGVCVDPYGNILVAEGDKHRISMY 525
>gi|188501588|gb|ACD54714.1| NHL repeat containing hypothetical protein RRC374-like protein
[Adineta vaga]
Length = 493
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 129/295 (43%), Gaps = 25/295 (8%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--------F 97
G+ G++ +P GI +G D SI V+D +N+RV + T
Sbjct: 200 GTAGNDLTALNYPWGIGIGIDESIYVSDYNNNRVIKLQEGSLVGTTIAGTGIAGNSAGQL 259
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTF---VGKFGSMGNKAGQLEHPHYIAVSN 154
P + V ++I V D+ N+RV +++ + T V GS G+ A P+ I V +
Sbjct: 260 KIPLDLFVDSSSNIYVVDNDNYRVMLWRKNATVGIKVAGSGSQGSTASTFREPNGITVDS 319
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI- 213
V VSD HRV + VN GT V G GN Q+ P + +
Sbjct: 320 MGNVYVSDFTTHRVMKWAVNATF----GTMVAGTGVSGNSTDQVYQPAGLYFDEIKSYLY 375
Query: 214 VSDSNNHRVQIFDVNG--RVITSFGSEGSEEG--QLKFPRGVAVDDQ-GYISVGDSGNNR 268
++D++NHR+Q + + + T G G G QL P V V + G I + D+ NNR
Sbjct: 376 IADASNHRIQRYYLGSTINITTVAGGYGLGTGNQQLNTPYSVCVSKKTGDIYIADTFNNR 435
Query: 269 IQIFTP---DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL-VCDRENHRIQVF 319
IQ ++P G + G GS G+A+ N L V D NHR+Q F
Sbjct: 436 IQRWSPGATSGVTIVGSGGLGSNSTMLNAPRGIALNYNETYLYVTDYNNHRVQRF 490
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 127 DGTFVGKFG--SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTF 184
+G VG +G + GN L +P I + + VSD NN+RV V GT
Sbjct: 190 NGITVGGYGNGTAGNDLTALNYPWGIGIGIDESIYVSDYNNNRVIKLQEGSLV----GTT 245
Query: 185 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV---ITSFGSEGSE 241
+ G GN AGQL+ P + V +++ + V D++N+RV ++ N V + GS+GS
Sbjct: 246 IAGTGIAGNSAGQLKIPLDLFVDSSSNIYVVDNDNYRVMLWRKNATVGIKVAGSGSQGST 305
Query: 242 EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF---LRAFGCWGSGDGEFKGLEGV 298
+ P G+ VD G + V D +R+ + + F + G G+ + G+
Sbjct: 306 ASTFREPNGITVDSMGNVYVSDFTTHRVMKWAVNATFGTMVAGTGVSGNSTDQVYQPAGL 365
Query: 299 AVMSNGNIL-VCDRENHRIQVF 319
+ L + D NHRIQ +
Sbjct: 366 YFDEIKSYLYIADASNHRIQRY 387
>gi|260819976|ref|XP_002605311.1| hypothetical protein BRAFLDRAFT_89047 [Branchiostoma floridae]
gi|229290644|gb|EEN61321.1| hypothetical protein BRAFLDRAFT_89047 [Branchiostoma floridae]
Length = 599
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 138/280 (49%), Gaps = 36/280 (12%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN---CVFLAFTWPRGIAVGPDNS 110
F PRG+AV N I VAD+ N +VQV H + N V P ++V + +
Sbjct: 339 TFVNPRGVAVSRSNEIFVADTGNKQVQVHSIHGNRLQNFPTVVSGQLMEPHDVSVDNNGA 398
Query: 111 IVVA---DSSNHRVQVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVSNTNRV----IVS 161
+ V S+++ VQ + DGT V KF +G+ G IAV +RV I+
Sbjct: 399 LWVVGRGKSADYVVQ-YNMDGTIVSKFDLPKVGDYRG-------IAVDGVSRVDFKRILV 450
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
+ + +++ +VF +G V F + ++ P Y+AV ++V+DS H
Sbjct: 451 TEASREMSRWEI--QVFTPEGDLVQAFR---HPDSGMKLPEYVAVDEGGNILVTDSTTHS 505
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
V IFD G+ + FG +GS +GQ+ + G+ D G+I V D N+R+QIF G+++
Sbjct: 506 VYIFDEFGKYLFKFGGKGSGKGQMLYANGICTDSSGHIIVADCRNSRVQIFNSHGEYIHH 565
Query: 282 F--GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GCW EGVA+ +G+++V + ++ + V+
Sbjct: 566 IDNGCW---------TEGVAIGPDGHLVVTNFYDNTVSVY 596
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD----LKTNCVFLAFTWPRGIAVGPDNS 110
+ GI I+VAD N RVQ+ H + + C W G+A+GPD
Sbjct: 529 MLYANGICTDSSGHIIVADCRNSRVQIFNSHGEYIHHIDNGC------WTEGVAIGPDGH 582
Query: 111 IVVADSSNHRVQVFQS 126
+VV + ++ V V+ S
Sbjct: 583 LVVTNFYDNTVSVYPS 598
>gi|261289751|ref|XP_002604852.1| hypothetical protein BRAFLDRAFT_70704 [Branchiostoma floridae]
gi|229290180|gb|EEN60862.1| hypothetical protein BRAFLDRAFT_70704 [Branchiostoma floridae]
Length = 495
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 119/265 (44%), Gaps = 50/265 (18%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------ 95
+ G RGSEPG F G+AV DN I V D N RVQV N VFL
Sbjct: 222 KISFGGRGSEPGKFNGNYGVAVSTDNEIFVTDYHNKRVQV------FGMNGVFLRLFPTK 275
Query: 96 -------AFTWPRGIAVGPDNSIVVA--DSSNHRVQVFQSDGTFVGKFGSMG-------- 138
P G+AV +++ V D N QV+ V K+ S G
Sbjct: 276 VLLEHKHTLINPYGVAVDTISNVWVTGDDDDNDLPQVY------VIKYSSKGGLPLTIFN 329
Query: 139 -NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
K + P NR+IV+ SN + IF NG + QS FV M G
Sbjct: 330 KRKPTKYTPPTITIDKRNNRIIVAISN--EILIFLPNGSLSQS---FV-----MTQSEGT 379
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
+P + + VI++D ++ V ++ +G + SF EG ++GQ+ + G+ VD G
Sbjct: 380 GLYP--LTPNENGNVIIADYDS--VHVYSKSGDHMYSFRGEGKDKGQMAWVSGIGVDKSG 435
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAF 282
YI V ++GNNRI +FT G+F+R
Sbjct: 436 YIIVANTGNNRIDMFTKQGEFVRTM 460
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+FG GS G+F G GVAV ++ I V D N R+QVF
Sbjct: 224 SFGGRGSEPGKFNGNYGVAVSTDNEIFVTDYHNKRVQVF 262
>gi|290999745|ref|XP_002682440.1| predicted protein [Naegleria gruberi]
gi|284096067|gb|EFC49696.1| predicted protein [Naegleria gruberi]
Length = 731
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 138/307 (44%), Gaps = 45/307 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQV---------------CFPHFDLKTNCVFLAFTW 99
P GI + +++I++AD +NHR+++ D + +
Sbjct: 257 LNTPNGITIDSNDNIIIADRNNHRIRLISNSSGIISTLAGNGTTGSRDEEVLATSAKLSR 316
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS-----MGNKAGQLE----HPHYI 150
P + +G D +++ D+ N +++ + +G G+ G++A L HP +
Sbjct: 317 PADVTIGYDGELIITDTDNFVIRIVKLNGMISTIAGTGFERFNGDRATSLSTLINHPSSM 376
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA--GQLEHPHYIAVSN 208
A + +I D +NHRV+ +G V G +G + G A QL +PH +A +
Sbjct: 377 AFKD-GELIFCDRSNHRVRRISKDGSVKTIAGNGIGGYNGDGMLAIDAQLNYPHGVASDS 435
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVIT-------SFGSEG--SEEGQLKFPRGVAVDDQGYI 259
+ +SDS NHRV+I NG + T F +G + QL +P G+A++ +
Sbjct: 436 IGNIYISDSYNHRVRIVFTNGTISTIAGNGNSGFNKDGIQATSSQLNYPFGIALNGNDEL 495
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFGCWGSG---------DGEFKGLEGVAVMSNGNILVCD 310
+ D N+R++ + +G G +G + + GV+V + GN+ + D
Sbjct: 496 FISDRSNHRVRKVSNNGIISTIAGTGSAGYNGDVIMATEAKLYLPHGVSVDNKGNVYIAD 555
Query: 311 RENHRIQ 317
++NHRI+
Sbjct: 556 KQNHRIR 562
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 120/254 (47%), Gaps = 36/254 (14%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT--------------NCVFLAFTWP 100
+P G+A +I ++DS NHRV++ F + + T +P
Sbjct: 425 LNYPHGVASDSIGNIYISDSYNHRVRIVFTNGTISTIAGNGNSGFNKDGIQATSSQLNYP 484
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDG--TFVGKFGSMGNKA-------GQLEHPHYIA 151
GIA+ ++ + ++D SNHRV+ ++G + + GS G +L PH ++
Sbjct: 485 FGIALNGNDELFISDRSNHRVRKVSNNGIISTIAGTGSAGYNGDVIMATEAKLYLPHGVS 544
Query: 152 VSNTNRVIVSDSNNHRV-QIFDVNGRVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVSN 208
V N V ++D NHR+ +I G + GT F +M ++ P+ + V
Sbjct: 545 VDNKGNVYIADKQNHRIRKILASTGMISTIAGTGQAGFNDDNMSALESRVNSPYDVTVDE 604
Query: 209 TNRVI-VSDSNNHRVQ------IFDVNGRVITSFGSEG--SEEGQLKFPRGVAVDD-QGY 258
+ +VI ++D+NNH+++ + + G I + +G S + QL +P V++D G
Sbjct: 605 SGQVIYIADTNNHKIRRIQNGNLTTIAGNGIGGYNQDGILSTQSQLYYPYDVSIDPVSGK 664
Query: 259 ISVGDSGNNRIQIF 272
I +GD+ N RI++
Sbjct: 665 IFIGDASNFRIRVL 678
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 56/262 (21%)
Query: 96 AFTWPRGIAVGP-DNSIVVADSSNHRVQVFQSDGTFVGKFGS---------MGNKAGQLE 145
+ WP ++ GP ++D+ NHRV+ ++GT G+ + + L
Sbjct: 41 SLNWPFDVSTGPIKGEYFISDTYNHRVRKILANGTMTTIAGTGFAGYNGDGILSSQAHLY 100
Query: 146 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA----GQLEHP 201
+P+ +AV++ V ++D+ NHR++ +NG + G VG G G+ + +L +P
Sbjct: 101 YPYDVAVNDLGEVYIADTYNHRIRKILLNGTIITVAG--VGSAGYSGDYSTAMQAKLNYP 158
Query: 202 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS-EGSEEG--------------QLK 246
H I V ++F NG +IT G+ EG +G L
Sbjct: 159 HGIYVK---------------KVFS-NGTIITIAGNGEGDADGYGKYNGDNMLATLSSLN 202
Query: 247 FPRGVAVDDQGYISVGDSGNNRIQIFTPDG--QFLRAFGCWG-SGDG------EFKGLEG 297
P VA++ + + DS N+RI+ + G + G G SGDG + G
Sbjct: 203 LPTTVALNSLNEVFIADSQNHRIRKVSNSGIISTVAGTGVSGYSGDGIPANTTKLNTPNG 262
Query: 298 VAVMSNGNILVCDRENHRIQVF 319
+ + SN NI++ DR NHRI++
Sbjct: 263 ITIDSNDNIIIADRNNHRIRLI 284
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 40/243 (16%)
Query: 66 DNSIVVADSSNHRVQVCFPHFDLKT--------------NCVFLAFTWPRGIAVGPDNSI 111
D ++ D SNHRV+ +KT + +P G+A +I
Sbjct: 380 DGELIFCDRSNHRVRRISKDGSVKTIAGNGIGGYNGDGMLAIDAQLNYPHGVASDSIGNI 439
Query: 112 VVADSSNHRVQVFQSDG---TFVGKFGSMGNKAG------QLEHPHYIAVSNTNRVIVSD 162
++DS NHRV++ ++G T G S NK G QL +P IA++ + + +SD
Sbjct: 440 YISDSYNHRVRIVFTNGTISTIAGNGNSGFNKDGIQATSSQLNYPFGIALNGNDELFISD 499
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN----KAGQLEHPHYIAVSNTNRVIVSDSN 218
+NHRV+ NG + GT G G G+ +L PH ++V N V ++D
Sbjct: 500 RSNHRVRKVSNNGIISTIAGT--GSAGYNGDVIMATEAKLYLPHGVSVDNKGNVYIADKQ 557
Query: 219 NHRVQIFDVNGRVITSFGSEG----------SEEGQLKFPRGVAVDDQG-YISVGDSGNN 267
NHR++ + +I++ G + E ++ P V VD+ G I + D+ N+
Sbjct: 558 NHRIRKILASTGMISTIAGTGQAGFNDDNMSALESRVNSPYDVTVDESGQVIYIADTNNH 617
Query: 268 RIQ 270
+I+
Sbjct: 618 KIR 620
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 130/309 (42%), Gaps = 49/309 (15%)
Query: 50 SEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT--------------NCVFL 95
S +P +AV + +AD+ NHR++ + + T +
Sbjct: 94 SSQAHLYYPYDVAVNDLGEVYIADTYNHRIRKILLNGTIITVAGVGSAGYSGDYSTAMQA 153
Query: 96 AFTWPRGIAVGP--DNSIVVADSSNHRVQVFQSDGTFVGKFG--SMGNKAGQLEHPHYIA 151
+P GI V N ++ + N + D GK+ +M L P +A
Sbjct: 154 KLNYPHGIYVKKVFSNGTIITIAGNG-----EGDADGYGKYNGDNMLATLSSLNLPTTVA 208
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAG--QLEHPHYIAVSNT 209
+++ N V ++DS NHR++ +G + GT V + G A +L P+ I + +
Sbjct: 209 LNSLNEVFIADSQNHRIRKVSNSGIISTVAGTGVSGYSGDGIPANTTKLNTPNGITIDSN 268
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSF---GSEGSEE-------GQLKFPRGVAVDDQGYI 259
+ +I++D NNHR+++ + +I++ G+ GS + +L P V + G +
Sbjct: 269 DNIIIADRNNHRIRLISNSSGIISTLAGNGTTGSRDEEVLATSAKLSRPADVTIGYDGEL 328
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMS-----------NGNILV 308
+ D+ N I+I +G G+G F G ++ + +G ++
Sbjct: 329 IITDTDNFVIRIVKLNGMIST---IAGTGFERFNGDRATSLSTLINHPSSMAFKDGELIF 385
Query: 309 CDRENHRIQ 317
CDR NHR++
Sbjct: 386 CDRSNHRVR 394
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 115/257 (44%), Gaps = 31/257 (12%)
Query: 92 CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTF-----VGKFGSMGN----KAG 142
+ P +A+ N + +ADS NHR++ + G G G G+
Sbjct: 196 ATLSSLNLPTTVALNSLNEVFIADSQNHRIRKVSNSGIISTVAGTGVSGYSGDGIPANTT 255
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQS---DGTFVGKFGSMGNKAGQLE 199
+L P+ I + + + +I++D NNHR+++ + + + +GT + + + +L
Sbjct: 256 KLNTPNGITIDSNDNIIIADRNNHRIRLISNSSGIISTLAGNGTTGSRDEEVLATSAKLS 315
Query: 200 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS---------EGSEEGQLKFPRG 250
P + + +I++D++N ++I +NG + T G+ S + P
Sbjct: 316 RPADVTIGYDGELIITDTDNFVIRIVKLNGMISTIAGTGFERFNGDRATSLSTLINHPSS 375
Query: 251 VAVDDQGYISVGDSGNNRIQIFTPDG--QFLRAFGCWG-SGDG------EFKGLEGVAVM 301
+A D G + D N+R++ + DG + + G G +GDG + GVA
Sbjct: 376 MAFKD-GELIFCDRSNHRVRRISKDGSVKTIAGNGIGGYNGDGMLAIDAQLNYPHGVASD 434
Query: 302 SNGNILVCDRENHRIQV 318
S GNI + D NHR+++
Sbjct: 435 SIGNIYISDSYNHRVRI 451
>gi|156537928|ref|XP_001608152.1| PREDICTED: B-box type zinc finger protein ncl-1-like [Nasonia
vitripennis]
Length = 943
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 111/259 (42%), Gaps = 44/259 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNT 155
F P G +G D I+VAD++NHR+Q+ + G F +FG G + GQL +P +AV N+
Sbjct: 687 FNSPHGFCLGTDEDIIVADTNNHRIQIVEKTGIFKFQFGIPGKEEGQLWYPRKVAVMRNS 746
Query: 156 NRVIVSDSNNH--RVQIFDVNGRVFQ----------------SDGTFV------------ 185
+ +V D N R+QIF NG + SDG V
Sbjct: 747 GKFVVCDRGNERSRMQIFTKNGHFIKKIAIRYIDIVAGLAVTSDGHIVAVDSVSPTVFVI 806
Query: 186 ---GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
GK + + + P I +S V D H V +F +G+ + G E
Sbjct: 807 NDAGKLLWWFDCSNHMREPSDITISG-KEFFVCDFKGHCVVVFHEDGQFLRRIGCESIT- 864
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNR--IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
FP G+ + D G + VGDS NR + +F+ DG + F C GL+ +
Sbjct: 865 ---NFPNGIDISDAGDVLVGDSHGNRFHVAVFSRDGSLISEFECPYVKVSRCCGLK---I 918
Query: 301 MSNGNILVCDRENHRIQVF 319
S G I+ + NH + V
Sbjct: 919 TSEGYIVTLAKNNHHVLVL 937
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 68/128 (53%), Gaps = 8/128 (6%)
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL 245
KFG +G Q PH + +IV+D+NNHR+QI + G FG G EEGQL
Sbjct: 675 SKFGQLGPNKSQFNSPHGFCLGTDEDIIVADTNNHRIQIVEKTGIFKFQFGIPGKEEGQL 734
Query: 246 KFPRGVAV-DDQGYISVGDSGN--NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMS 302
+PR VAV + G V D GN +R+QIFT +G F++ + G+AV S
Sbjct: 735 WYPRKVAVMRNSGKFVVCDRGNERSRMQIFTKNGHFIKKIAIR-----YIDIVAGLAVTS 789
Query: 303 NGNILVCD 310
+G+I+ D
Sbjct: 790 DGHIVAVD 797
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 83/191 (43%), Gaps = 20/191 (10%)
Query: 132 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM 191
KFG +G Q PH + +IV+D+NNHR+QI + G F +FG
Sbjct: 675 SKFGQLGPNKSQFNSPHGFCLGTDEDIIVADTNNHRIQI-------VEKTGIFKFQFGIP 727
Query: 192 GNKAGQLEHPHYIAV-SNTNRVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFP 248
G + GQL +P +AV N+ + +V D N R+QIF NG I +
Sbjct: 728 GKEEGQLWYPRKVAVMRNSGKFVVCDRGNERSRMQIFTKNGHFIKKIAIR-----YIDIV 782
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
G+AV G+I DS + + + G+ L F C + + + S V
Sbjct: 783 AGLAVTSDGHIVAVDSVSPTVFVINDAGKLLWWFDC----SNHMREPSDITI-SGKEFFV 837
Query: 309 CDRENHRIQVF 319
CD + H + VF
Sbjct: 838 CDFKGHCVVVF 848
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
++ + FG G + Q P G + I V D+ N+RIQI G F FG G +
Sbjct: 672 QIRSKFGQLGPNKSQFNSPHGFCLGTDEDIIVADTNNHRIQIVEKTGIFKFQFGIPGKEE 731
Query: 290 GEFKGLEGVAVMSN-GNILVCDR--ENHRIQVF 319
G+ VAVM N G +VCDR E R+Q+F
Sbjct: 732 GQLWYPRKVAVMRNSGKFVVCDRGNERSRMQIF 764
>gi|357630922|gb|EHJ78730.1| hypothetical protein KGM_04358 [Danaus plexippus]
Length = 864
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 109/259 (42%), Gaps = 44/259 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-T 155
F P G +G D I+VAD++NHR+ VF GT FG G + GQL +P +AV T
Sbjct: 608 FNSPHGFCLGNDEDIIVADTNNHRITVFDKSGTHKFNFGVAGKEEGQLWYPRKVAVVRAT 667
Query: 156 NRVIVSDSNNH--RVQIFDVNGRVFQ----------------SDGTFV------------ 185
+ +V D N R+QIF NG + ++G V
Sbjct: 668 GKFVVCDRGNERSRMQIFTKNGHFLKKIAVRFIDIVAGLAVTAEGLIVAVDSVTPTVFIL 727
Query: 186 ---GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
G S + + + P IA+S V D H V +FD GR + G E
Sbjct: 728 SEEGDLLSWFDCSECMREPSDIAISG-KEFYVCDFKGHCVVVFDDEGRFLRRIGCENV-- 784
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNR--IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
FP G+ V D G + +GDS N+ + +F+ DG + F C GL+ +
Sbjct: 785 --TNFPNGIDVSDAGDVLIGDSHGNKFHVAVFSRDGVLVTEFECPYVKVSRCCGLK---I 839
Query: 301 MSNGNILVCDRENHRIQVF 319
S G I+ + NH + V
Sbjct: 840 TSEGYIVTLAKNNHHVLVL 858
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 69/127 (54%), Gaps = 8/127 (6%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
KFG +G GQ PH + N +IV+D+NNHR+ +FD +G +FG G EEGQL
Sbjct: 597 KFGQLGGGKGQFNSPHGFCLGNDEDIIVADTNNHRITVFDKSGTHKFNFGVAGKEEGQLW 656
Query: 247 FPRGVA-VDDQGYISVGDSGN--NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
+PR VA V G V D GN +R+QIFT +G FL+ + G+AV +
Sbjct: 657 YPRKVAVVRATGKFVVCDRGNERSRMQIFTKNGHFLKKIAVRF-----IDIVAGLAVTAE 711
Query: 304 GNILVCD 310
G I+ D
Sbjct: 712 GLIVAVD 718
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 82/190 (43%), Gaps = 20/190 (10%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
KFG +G GQ PH + N +IV+D+NNHR+ +FD GT FG G
Sbjct: 597 KFGQLGGGKGQFNSPHGFCLGNDEDIIVADTNNHRITVFD-------KSGTHKFNFGVAG 649
Query: 193 NKAGQLEHPHYIAVSN-TNRVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
+ GQL +P +AV T + +V D N R+QIF NG + +
Sbjct: 650 KEEGQLWYPRKVAVVRATGKFVVCDRGNERSRMQIFTKNGHFLKKIAVRF-----IDIVA 704
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
G+AV +G I DS + I + +G L F C E +S VC
Sbjct: 705 GLAVTAEGLIVAVDSVTPTVFILSEEGDLLSWFDC-----SECMREPSDIAISGKEFYVC 759
Query: 310 DRENHRIQVF 319
D + H + VF
Sbjct: 760 DFKGHCVVVF 769
>gi|383859258|ref|XP_003705112.1| PREDICTED: uncharacterized protein LOC100882263 [Megachile
rotundata]
Length = 943
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 111/259 (42%), Gaps = 44/259 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNT 155
F+ P G + D I+VAD++NHR+Q+F+ G F +FG G + GQL +P +AV N+
Sbjct: 687 FSSPHGFCLSADEDIIVADTNNHRIQIFEKTGIFKFQFGVPGKEEGQLWYPRKVAVMRNS 746
Query: 156 NRVIVSDSNNH--RVQIFDVNGRVFQ---------------------------SDGTFV- 185
+ +V D N R+QIF NG + S FV
Sbjct: 747 GKFVVCDRGNERSRMQIFTKNGHFMKKIAIRYIDIVAGLAVTSEGHILAVDSVSPTVFVI 806
Query: 186 ---GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
G + + + P IA+S V D H V +F+ G+ + G +
Sbjct: 807 SDTGDLLRWFDCSEYMREPSDIAISG-KEYFVCDFKGHCVVVFNEEGKFLRRIGCDNV-- 863
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNR--IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
FP G+ + D G I +GDS NR + +F+ DG + F C GL+ +
Sbjct: 864 --TNFPNGIDISDAGDILIGDSHGNRFHVAVFSRDGSLISEFECPYVKVSRCCGLK---I 918
Query: 301 MSNGNILVCDRENHRIQVF 319
S G I+ + NH + V
Sbjct: 919 TSEGYIVTLAKNNHHVLVL 937
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 70/127 (55%), Gaps = 8/127 (6%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
KFG +G GQ PH +S +IV+D+NNHR+QIF+ G FG G EEGQL
Sbjct: 676 KFGQLGPSKGQFSSPHGFCLSADEDIIVADTNNHRIQIFEKTGIFKFQFGVPGKEEGQLW 735
Query: 247 FPRGVAV-DDQGYISVGDSGN--NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
+PR VAV + G V D GN +R+QIFT +G F++ + G+AV S
Sbjct: 736 YPRKVAVMRNSGKFVVCDRGNERSRMQIFTKNGHFMKKIAIR-----YIDIVAGLAVTSE 790
Query: 304 GNILVCD 310
G+IL D
Sbjct: 791 GHILAVD 797
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 20/190 (10%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
KFG +G GQ PH +S +IV+D+NNHR+QI F+ G F +FG G
Sbjct: 676 KFGQLGPSKGQFSSPHGFCLSADEDIIVADTNNHRIQI-------FEKTGIFKFQFGVPG 728
Query: 193 NKAGQLEHPHYIAV-SNTNRVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
+ GQL +P +AV N+ + +V D N R+QIF NG + +
Sbjct: 729 KEEGQLWYPRKVAVMRNSGKFVVCDRGNERSRMQIFTKNGHFMKKIAIR-----YIDIVA 783
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
G+AV +G+I DS + + + + G LR F C E+ +S VC
Sbjct: 784 GLAVTSEGHILAVDSVSPTVFVISDTGDLLRWFDC-----SEYMREPSDIAISGKEYFVC 838
Query: 310 DRENHRIQVF 319
D + H + VF
Sbjct: 839 DFKGHCVVVF 848
>gi|260826079|ref|XP_002607993.1| hypothetical protein BRAFLDRAFT_213530 [Branchiostoma floridae]
gi|229293343|gb|EEN64003.1| hypothetical protein BRAFLDRAFT_213530 [Branchiostoma floridae]
Length = 728
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 15/219 (6%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+AV N I+V+D N+++ +F G + GS G+ GQL PH + + + +IVSD
Sbjct: 479 VAVNSRNQIIVSDWHNNKMMMFDPSGRHLFTCGSRGSGPGQLSTPHCVITDSLDNIIVSD 538
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
NHRV +F DGTF+ + L +P +AV++ +IVSD +
Sbjct: 539 CYNHRVSLF-------SRDGTFIRHV--LTETEHGLYYPRGLAVTHDGHLIVSDFIT--I 587
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPR--GVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
F +G V+ G G ++GQ F VAV+ + I V D N+ + +F P G+ L
Sbjct: 588 TFFIPSGDVMMRIG--GKDQGQQDFGSILRVAVNSRNQIIVSDEWNSNMMMFDPFGRHLF 645
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G SG G+ V S NI+V D N R+ +F
Sbjct: 646 TCGSLDSGPGQLDYSHCVITDSEDNIIVSDYSNRRVSLF 684
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 18/228 (7%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGK----FGSMGNKAGQLEHPHYIAV 152
F +AV + IV D N R+Q DG+F K F + A L + +
Sbjct: 360 FQSLESLAVTAEGDIVATDRDNSRLQFLGKDGSFKKKVDLKFKPLSVAA--LPNCELLVT 417
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN--------KAGQLEHPHY- 203
+ R+ V D ++ + G S T V K G+ GQ Y
Sbjct: 418 GDGQRIHVLDKQGKESRVIQMTGAKVTSRTTQVFKLSPSGDVMMRIGGKDQGQQSFGPYL 477
Query: 204 -IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
+AV++ N++IVSD +N+++ +FD +GR + + GS GS GQL P V D I V
Sbjct: 478 RVAVNSRNQIIVSDWHNNKMMMFDPSGRHLFTCGSRGSGPGQLSTPHCVITDSLDNIIVS 537
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
D N+R+ +F+ DG F+R + G+AV +G+++V D
Sbjct: 538 DCYNHRVSLFSRDGTFIRHV--LTETEHGLYYPRGLAVTHDGHLIVSD 583
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 42/208 (20%)
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
++ GQ + +AV+ ++ +D +N R+Q F+GK GS K
Sbjct: 355 DRDGQFQSLESLAVTAEGDIVATDRDNSRLQ--------------FLGKDGSFKKKVDLK 400
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG---RVITSFGSE----------------- 238
P +A ++V+ + R+ + D G RVI G++
Sbjct: 401 FKPLSVAALPNCELLVT-GDGQRIHVLDKQGKESRVIQMTGAKVTSRTTQVFKLSPSGDV 459
Query: 239 -----GSEEGQLKF--PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
G ++GQ F VAV+ + I V D NN++ +F P G+ L G GSG G+
Sbjct: 460 MMRIGGKDQGQQSFGPYLRVAVNSRNQIIVSDWHNNKMMMFDPSGRHLFTCGSRGSGPGQ 519
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
V S NI+V D NHR+ +F
Sbjct: 520 LSTPHCVITDSLDNIIVSDCYNHRVSLF 547
>gi|260818777|ref|XP_002604559.1| hypothetical protein BRAFLDRAFT_79421 [Branchiostoma floridae]
gi|229289886|gb|EEN60570.1| hypothetical protein BRAFLDRAFT_79421 [Branchiostoma floridae]
Length = 1246
Score = 92.8 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 70/234 (29%), Positives = 103/234 (44%), Gaps = 54/234 (23%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKF---------------------- 134
F P G+ V + I VAD N R+QVF GTFV +F
Sbjct: 827 FDCPCGVTVSDEGEIFVADRWNQRIQVFTLQGTFVRQFSTVVSGEEKMWPCDVAMDGEGN 886
Query: 135 ----GSMG-----------NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD---VNGR 176
G G NK G+L + + R + D+ + + I VN R
Sbjct: 887 LWVVGETGDDISDEFAVQYNKQGRLLRKFDLQTTGLCRGVAVDTRRNHILITQSKIVNTR 946
Query: 177 ----------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
VF+ DGT V ++G + G + +P +I + + V D +NH V ++
Sbjct: 947 YIYNQHGEVLVFRPDGTLVR---TVGQQQGMV-YPWFITGNEVGNIFVLDCHNHHVYGYN 1002
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
+G+ + FG EGS EGQLK P G+ D G I V D+ NNR+++F G+FL+
Sbjct: 1003 EDGQFLFQFGGEGSGEGQLKNPLGICTDRAGNIIVADTWNNRVEMFDKAGKFLK 1056
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 63/249 (25%), Positives = 101/249 (40%), Gaps = 50/249 (20%)
Query: 118 NHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 177
N R + QS FG G+ GQ + P + VS+ + V+D N R+Q+F + G
Sbjct: 803 NQRQEATQSHDQVT--FGEEGSGTGQFDCPCGVTVSDEGEIFVADRWNQRIQVFTLQGTF 860
Query: 178 FQSDGTFVG------------------------------KFGSMGNKAGQLEHPHYIAVS 207
+ T V +F NK G+L + +
Sbjct: 861 VRQFSTVVSGEEKMWPCDVAMDGEGNLWVVGETGDDISDEFAVQYNKQGRLLRKFDLQTT 920
Query: 208 NTNRVIVSDSNNHRVQIFD---VNGRVITSFGSE--------------GSEEGQLKFPRG 250
R + D+ + + I VN R I + E G ++G + +P
Sbjct: 921 GLCRGVAVDTRRNHILITQSKIVNTRYIYNQHGEVLVFRPDGTLVRTVGQQQGMV-YPWF 979
Query: 251 VAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
+ ++ G I V D N+ + + DGQFL FG GSG+G+ K G+ GNI+V D
Sbjct: 980 ITGNEVGNIFVLDCHNHHVYGYNEDGQFLFQFGGEGSGEGQLKNPLGICTDRAGNIIVAD 1039
Query: 311 RENHRIQVF 319
N+R+++F
Sbjct: 1040 TWNNRVEMF 1048
>gi|193661979|ref|XP_001944634.1| PREDICTED: tripartite motif-containing protein 2-like
[Acyrthosiphon pisum]
Length = 815
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 110/261 (42%), Gaps = 46/261 (17%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G + P IVVAD+ NHR+QVF+ DGT+ +FG G + G L +P + N N
Sbjct: 559 FHSPHGFCLSPTEDIVVADTHNHRIQVFEKDGTYKTEFGREGKEDGYLFYPRKVVFLNHN 618
Query: 157 RVIVSD--SNNHRVQIFD------------------------VNGRVFQSDGTFVGKFGS 190
+++V D S+ RVQIF+ NG + D F
Sbjct: 619 QIVVCDRGSDRSRVQIFEYPTGKFIKKIQVQFIEIVAGVAVTANGHLALVDSVHPTVFVL 678
Query: 191 MGNK----------AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGS 240
N+ A +E P I V + + V D H + +F+ G + G E
Sbjct: 679 NVNEDNGIMKWFDCASYMEEPSDIIVRDDD-YYVCDFKGHSIVVFNDEGVCLRRIGGEYI 737
Query: 241 EEGQLKFPRGVAVDDQGYISVGDSGNNR--IQIFTPDGQFLRAFGCWGSGDGEFKGLEGV 298
FP G+ + + G I VGDS NR + +F+ DG L C GL+
Sbjct: 738 T----SFPNGIDISENGEILVGDSHGNRFHVAVFSHDGTHLTDLECPYIKVSRCCGLK-- 791
Query: 299 AVMSNGNILVCDRENHRIQVF 319
+ S G+I+ + NH + V
Sbjct: 792 -ITSGGHIVTLAKNNHHVLVL 811
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 8/130 (6%)
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
V KFG MG+ GQ PH +S T ++V+D++NHR+Q+F+ +G T FG EG E+G
Sbjct: 545 IVAKFGQMGSGLGQFHSPHGFCLSPTEDIVVADTHNHRIQVFEKDGTYKTEFGREGKEDG 604
Query: 244 QLKFPRGVAVDDQGYISVGDSGNN--RIQIFT-PDGQFLRAFGCWGSGDGEFKGLEGVAV 300
L +PR V + I V D G++ R+QIF P G+F++ + + GVAV
Sbjct: 605 YLFYPRKVVFLNHNQIVVCDRGSDRSRVQIFEYPTGKFIKKIQVQF-----IEIVAGVAV 659
Query: 301 MSNGNILVCD 310
+NG++ + D
Sbjct: 660 TANGHLALVD 669
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 22/195 (11%)
Query: 130 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG 189
V KFG MG+ GQ PH +S T ++V+D++NHR+Q VF+ DGT+ +FG
Sbjct: 545 IVAKFGQMGSGLGQFHSPHGFCLSPTEDIVVADTHNHRIQ-------VFEKDGTYKTEFG 597
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSD--SNNHRVQIFDV-NGRVITSFGSEGSEEGQLK 246
G + G L +P + N N+++V D S+ RVQIF+ G+ I + E
Sbjct: 598 REGKEDGYLFYPRKVVFLNHNQIVVCDRGSDRSRVQIFEYPTGKFIKKIQVQFIE----- 652
Query: 247 FPRGVAVDDQGYISVGDSGNNRIQIF--TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNG 304
GVAV G++++ DS + + + D ++ F C + ++ +
Sbjct: 653 IVAGVAVTANGHLALVDSVHPTVFVLNVNEDNGIMKWFDC-----ASYMEEPSDIIVRDD 707
Query: 305 NILVCDRENHRIQVF 319
+ VCD + H I VF
Sbjct: 708 DYYVCDFKGHSIVVF 722
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 24/46 (52%)
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
P + FG GSG G+F G + +I+V D NHRIQVF
Sbjct: 541 PSMDIVAKFGQMGSGLGQFHSPHGFCLSPTEDIVVADTHNHRIQVF 586
>gi|260822978|ref|XP_002603960.1| hypothetical protein BRAFLDRAFT_71752 [Branchiostoma floridae]
gi|229289285|gb|EEN59971.1| hypothetical protein BRAFLDRAFT_71752 [Branchiostoma floridae]
Length = 629
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 119/267 (44%), Gaps = 55/267 (20%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM-----------------GN 139
F P G+ V + I VAD N R+QVF GTFV +F ++ GN
Sbjct: 371 FRDPHGVTVSDEGEIFVADWGNQRIQVFALQGTFVRQFPTVVSGEEEMDPYDVAMDGEGN 430
Query: 140 K--AGQLEHPHYIAVSNTN---------------RVIVSDSNNHRVQIFDVNGR------ 176
G++E + N R + D+ + + I G
Sbjct: 431 LWVVGRIESAEFAVQYNKQGRVLRNFELQRTWCARGVAVDTRRNHILITQTTGDGGNNHG 490
Query: 177 ---VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN-NHRVQIFDVNGRVI 232
VF+ DGT V ++G + G + +P YI V ++VSD NH V ++ +G+ +
Sbjct: 491 EVLVFRPDGTLV---KTVGQQQG-MRNPLYITVDGEGNILVSDYWFNHCVYVYSQDGQFL 546
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
FG EGS EGQL P G+ D G I V D+GN+R+++F G+F++ + D
Sbjct: 547 FQFGGEGSGEGQLGCPHGICTDRAGNIIVADTGNSRVEMFDKTGKFIKHI----TTD--- 599
Query: 293 KGLEGVAVMSNGNILVCDRENHRIQVF 319
G E VA+ G ++V D + + +F
Sbjct: 600 MGPEAVAMAPQGQLVVTDTMYNTVSIF 626
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 127/308 (41%), Gaps = 76/308 (24%)
Query: 21 VSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ 80
G G R + Q +++ F G GSE G F P G+ V + I VAD N R+Q
Sbjct: 339 AEGTGHHHGNQRQEEPQSQKVTF--GGSGSETGQFRDPHGVTVSDEGEIFVADWGNQRIQ 396
Query: 81 VC---------FP-------------------------------HFDLKTNC-------V 93
V FP F ++ N
Sbjct: 397 VFALQGTFVRQFPTVVSGEEEMDPYDVAMDGEGNLWVVGRIESAEFAVQYNKQGRVLRNF 456
Query: 94 FLAFTW-PRGIAVGP-DNSIVVADSS-----NH-RVQVFQSDGTFVGKFGSMGNKAGQLE 145
L TW RG+AV N I++ ++ NH V VF+ DGT V ++G + G +
Sbjct: 457 ELQRTWCARGVAVDTRRNHILITQTTGDGGNNHGEVLVFRPDGTLV---KTVGQQQG-MR 512
Query: 146 HPHYIAVSNTNRVIVSDSN-NHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYI 204
+P YI V ++VSD NH V V+ DG F+ +FG G+ GQL PH I
Sbjct: 513 NPLYITVDGEGNILVSDYWFNHCV-------YVYSQDGQFLFQFGGEGSGEGQLGCPHGI 565
Query: 205 AVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDS 264
+IV+D+ N RV++FD G+ I ++ P VA+ QG + V D+
Sbjct: 566 CTDRAGNIIVADTGNSRVEMFDKTGKFIKHITTDMG-------PEAVAMAPQGQLVVTDT 618
Query: 265 GNNRIQIF 272
N + IF
Sbjct: 619 MYNTVSIF 626
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 48/230 (20%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFV-------- 185
FG G++ GQ PH + VS+ + V+D N R+Q+F + G + T V
Sbjct: 361 FGGSGSETGQFRDPHGVTVSDEGEIFVADWGNQRIQVFALQGTFVRQFPTVVSGEEEMDP 420
Query: 186 -------------------GKFGSMGNKAGQLEH---------PHYIAV-SNTNRVIVSD 216
+F NK G++ +AV + N ++++
Sbjct: 421 YDVAMDGEGNLWVVGRIESAEFAVQYNKQGRVLRNFELQRTWCARGVAVDTRRNHILITQ 480
Query: 217 S-----NNH-RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG-NNRI 269
+ NNH V +F +G ++ + G + ++ P + VD +G I V D N+ +
Sbjct: 481 TTGDGGNNHGEVLVFRPDGTLVKTVGQQQG----MRNPLYITVDGEGNILVSDYWFNHCV 536
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+++ DGQFL FG GSG+G+ G+ GNI+V D N R+++F
Sbjct: 537 YVYSQDGQFLFQFGGEGSGEGQLGCPHGICTDRAGNIIVADTGNSRVEMF 586
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VFQ T V G + QL P I +++N ++H Q + +FG
Sbjct: 306 VFQPTDTPVPVLGHV-TVPSQLSSP--IPAAHSNGAAEGTGHHHGNQRQEEPQSQKVTFG 362
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
GSE GQ + P GV V D+G I V D GN RIQ+F G F+R F SG+ E +
Sbjct: 363 GSGSETGQFRDPHGVTVSDEGEIFVADWGNQRIQVFALQGTFVRQFPTVVSGEEEMDPYD 422
Query: 297 GVAVMSNGNILVCDR 311
VA+ GN+ V R
Sbjct: 423 -VAMDGEGNLWVVGR 436
>gi|260806462|ref|XP_002598103.1| hypothetical protein BRAFLDRAFT_85679 [Branchiostoma floridae]
gi|229283374|gb|EEN54115.1| hypothetical protein BRAFLDRAFT_85679 [Branchiostoma floridae]
Length = 711
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 103/228 (45%), Gaps = 49/228 (21%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G+ V I VAD N R+QVF GTF +F ++ G+ +PH +A+
Sbjct: 455 FHGPVGVTVSDHGEIFVADRWNQRIQVFTLQGTFARQFPTV-TSGGKKMYPHDVAMDRAG 513
Query: 157 RV-----------------------------------IVSDSNNHRVQIFDVNGR----- 176
++ + D+ + + I G
Sbjct: 514 KLWMVGGTKSAGFAVQYSKQGRVLRKFDLQKIKWVRGVAMDTRRNHILITQTTGDGDNRH 573
Query: 177 ----VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
VF+ DGT V ++G + G +++P YI V ++VSD +N + +++ +G+ +
Sbjct: 574 GEVLVFRPDGTLVR---TVGQQQG-MKYPWYITVGGEGNIVVSDISNQCIYVYNKDGQFL 629
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
FG EGS GQL PRG+ D G I V D GN+R+++F G+FL+
Sbjct: 630 FQFGVEGSGGGQLNEPRGICTDRAGNIIVADRGNSRVEMFDKKGKFLK 677
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 97/235 (41%), Gaps = 59/235 (25%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G+ GQ P + VS+ + V+D N R+Q+F + GTF +F ++
Sbjct: 445 FGGWGSGTGQFHGPVGVTVSDHGEIFVADRWNQRIQVFTLQ-------GTFARQFPTV-T 496
Query: 194 KAGQLEHPHYIAVSNTNRVIV---SDSNNHRVQIFDVNGRVITSFGSE------------ 238
G+ +PH +A+ ++ + + S VQ + GRV+ F +
Sbjct: 497 SGGKKMYPHDVAMDRAGKLWMVGGTKSAGFAVQ-YSKQGRVLRKFDLQKIKWVRGVAMDT 555
Query: 239 ----------------------------------GSEEGQLKFPRGVAVDDQGYISVGDS 264
G ++G +K+P + V +G I V D
Sbjct: 556 RRNHILITQTTGDGDNRHGEVLVFRPDGTLVRTVGQQQG-MKYPWYITVGGEGNIVVSDI 614
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
N I ++ DGQFL FG GSG G+ G+ GNI+V DR N R+++F
Sbjct: 615 SNQCIYVYNKDGQFLFQFGVEGSGGGQLNEPRGICTDRAGNIIVADRGNSRVEMF 669
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 29/55 (52%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
+FG GS GQ P GV V D G I V D N RIQ+FT G F R F SG
Sbjct: 444 TFGGWGSGTGQFHGPVGVTVSDHGEIFVADRWNQRIQVFTLQGTFARQFPTVTSG 498
>gi|332016621|gb|EGI57493.1| Brain tumor protein [Acromyrmex echinatior]
Length = 802
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 109/259 (42%), Gaps = 44/259 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G +G D I+VAD++NHR+Q+F GTF +FG G + GQL +P +AV N
Sbjct: 546 FNSPHGFCLGTDEDIIVADTNNHRIQIFDKTGTFKFQFGVPGKEEGQLWYPRKVAVMRNN 605
Query: 157 -RVIVSDSNNH--RVQIFDVNGRVFQ---------------------------SDGTFV- 185
+ +V D N R+QIF NG + S FV
Sbjct: 606 GKFVVCDRGNERSRMQIFTKNGHFIKKIAIRYIDIVAGLAVTSQGHIVAVDSVSPTVFVI 665
Query: 186 ---GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
G + + + P IA+S V D H V +F+ G+ + G E
Sbjct: 666 SDTGDLLRWFDCSDYMREPSDIAISG-KEYFVCDFKGHCVVVFNEEGKFLRRIGCENV-- 722
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNR--IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
FP G+ + D G + +GDS NR + +F+ G + F C GL+ +
Sbjct: 723 --TNFPNGIDISDAGDVLIGDSHGNRFHVAVFSRAGSLISEFECPYVKVSRCCGLK---I 777
Query: 301 MSNGNILVCDRENHRIQVF 319
S G I+ + NH + V
Sbjct: 778 TSEGYIVTLAKNNHHVLVL 796
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 87/191 (45%), Gaps = 20/191 (10%)
Query: 132 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM 191
KFG +G GQ PH + +IV+D+NNHR+QIFD GTF +FG
Sbjct: 534 SKFGQLGPSKGQFNSPHGFCLGTDEDIIVADTNNHRIQIFD-------KTGTFKFQFGVP 586
Query: 192 GNKAGQLEHPHYIAVSNTN-RVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFP 248
G + GQL +P +AV N + +V D N R+QIF NG I +
Sbjct: 587 GKEEGQLWYPRKVAVMRNNGKFVVCDRGNERSRMQIFTKNGHFIKKIAIR-----YIDIV 641
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
G+AV QG+I DS + + + + G LR F C ++ +S V
Sbjct: 642 AGLAVTSQGHIVAVDSVSPTVFVISDTGDLLRWFDC-----SDYMREPSDIAISGKEYFV 696
Query: 309 CDRENHRIQVF 319
CD + H + VF
Sbjct: 697 CDFKGHCVVVF 707
>gi|297568314|ref|YP_003689658.1| hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
gi|296924229|gb|ADH85039.1| YD repeat protein [Desulfurivibrio alkaliphilus AHT2]
Length = 2439
Score = 92.8 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 83/315 (26%), Positives = 133/315 (42%), Gaps = 58/315 (18%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC---------------------VFLA 96
P +++ PD +I +AD+ NHR++ + T+ V
Sbjct: 1093 PSCVSIDPDGTIYIADTGNHRIRSVGTDGIITTHAGSGFRAGGLGDSGYSGDDGPAVNAR 1152
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDG--TFVGKFGSMG------------NKAG 142
P IA+GPD SI +ADS NHR++ +DG T V G G
Sbjct: 1153 LNSPTDIALGPDGSIYIADSINHRIRRVGTDGIITTVAGTGPTGWWSGGFSGDGGSAVEA 1212
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA--GQLEH 200
+L+ PH +A+ + ++D+ NHR++ +G + GT F G A +L
Sbjct: 1213 RLDRPHAVAIGPDGSIYIADTYNHRIRRVGTDGIITTIAGTGYRGFSGDGGPADEARLFG 1272
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGS----------EEGQLKFPRG 250
P +A+ + ++D+ NHR++ +G +IT+ GS E P G
Sbjct: 1273 PIAVAIGPDGSIYIADTYNHRIRRVGTDG-IITTVAGTGSLGYSGDGGPATEASFSTPSG 1331
Query: 251 VAVDDQGYISVGDSGNNRIQ-------IFTPDGQFLRAF-GCWGSGDGEFKGLEGVAVMS 302
+ G + + + N+RI+ I T G R F G G D G GV++
Sbjct: 1332 ITFGPDGSLYI--AANHRIRRVGTDGIITTIAGTGYRGFSGDGGPADEARLGPRGVSLGP 1389
Query: 303 NGNILVCDRENHRIQ 317
+G+I V D NHRI+
Sbjct: 1390 DGSIYVADSNNHRIR 1404
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 15/81 (18%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQ-------------VCFPHFDLKTNCVFLAFTWPR 101
F+ P GI GPD S+ +A +NHR++ + F A PR
Sbjct: 1326 FSTPSGITFGPDGSLYIA--ANHRIRRVGTDGIITTIAGTGYRGFSGDGGPADEARLGPR 1383
Query: 102 GIAVGPDNSIVVADSSNHRVQ 122
G+++GPD SI VADS+NHR++
Sbjct: 1384 GVSLGPDGSIYVADSNNHRIR 1404
>gi|148262996|ref|YP_001229702.1| NHL repeat-containing protein [Geobacter uraniireducens Rf4]
gi|146396496|gb|ABQ25129.1| NHL repeat containing protein [Geobacter uraniireducens Rf4]
Length = 379
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 116/254 (45%), Gaps = 19/254 (7%)
Query: 50 SEPG-CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--AFTWPRGIAVG 106
+EPG + P GIAV + I V+D+ ++ F+ KT +F A P IA+
Sbjct: 75 AEPGETLSKPYGIAVR-GSKIYVSDTPFAQLSAI--DFEQKTYALFRQDAMQTPINIALD 131
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
+ +I VAD+ V F +G A ++ P +A+ + + V D ++
Sbjct: 132 QEGNIYVADTGKKAVLQFTPEGDLQRTL------AREITKPTDVAIYG-DEIFVVDYSSS 184
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
V++ D + G + G G L P +A+ V V++ ++R+ D
Sbjct: 185 EVKVLD------RKSGNLIRSIGREGKPDETLSLPTNLALDKNGFVYVTNLGHNRIIKMD 238
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
G+V+ +FG G GQ P+G+AVDD G I V D+G+ +QIF D Q L FG G
Sbjct: 239 RTGKVMKAFGETGDRPGQFARPKGIAVDDDGLIYVVDAGHQVVQIFNQDAQLLMFFGERG 298
Query: 287 SGDGEFKGLEGVAV 300
S G +A+
Sbjct: 299 SKAGTLNLPADIAI 312
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 21/224 (9%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
+ P GIAV + I V+D+ ++ + F + ++ P IA+
Sbjct: 81 LSKPYGIAVR-GSKIYVSDTPFAQLSAIDFEQKTYALF-----RQDAMQTPINIALDQEG 134
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ V+D+ V F G + ++ A ++ P +A+ + + V D
Sbjct: 135 NIYVADTGKKAVLQFTPEGDLQRT-------------LAREITKPTDVAIYG-DEIFVVD 180
Query: 217 SNNHRVQIFD-VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
++ V++ D +G +I S G EG + L P +A+D G++ V + G+NRI
Sbjct: 181 YSSSEVKVLDRKSGNLIRSIGREGKPDETLSLPTNLALDKNGFVYVTNLGHNRIIKMDRT 240
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ ++AFG G G+F +G+AV +G I V D + +Q+F
Sbjct: 241 GKVMKAFGETGDRPGQFARPKGIAVDDDGLIYVVDAGHQVVQIF 284
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 56 TWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA----------FTWPRGIAV 105
T P +A+ D I V D S+ V+V D K+ + + + P +A+
Sbjct: 164 TKPTDVAIYGD-EIFVVDYSSSEVKV----LDRKSGNLIRSIGREGKPDETLSLPTNLAL 218
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
+ + V + ++R+ G + FG G++ GQ P IAV + + V D+ +
Sbjct: 219 DKNGFVYVTNLGHNRIIKMDRTGKVMKAFGETGDRPGQFARPKGIAVDDDGLIYVVDAGH 278
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
VQIF+ D + FG G+KAG L P IA+S N
Sbjct: 279 QVVQIFN-------QDAQLLMFFGERGSKAGTLNLPADIAISRDN 316
>gi|307180312|gb|EFN68345.1| Brain tumor protein [Camponotus floridanus]
Length = 952
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 109/259 (42%), Gaps = 44/259 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G +G D I+VAD++NHR+Q+F GTF +FG G + GQL +P +AV N
Sbjct: 696 FNSPHGFCLGTDEDIIVADTNNHRIQIFDKTGTFKFQFGVPGKEEGQLWYPRKVAVMRNN 755
Query: 157 -RVIVSDSNNH--RVQIFDVNGRVFQ---------------------------SDGTFV- 185
+ +V D N R+QIF NG + S FV
Sbjct: 756 GKFVVCDRGNERSRMQIFTKNGHFIKKIAIRYIDIVAGLAVTSQGHIVAVDSVSPTVFVI 815
Query: 186 ---GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
G + + + P IA+S V D H V +F+ G+ + G E
Sbjct: 816 SDTGDLLRWFDCSDYMREPSDIAISG-KEYFVCDFKGHCVVVFNEEGKFLRRIGCENVT- 873
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNR--IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
FP G+ + D G + +GDS NR + +F+ G + F C GL+ +
Sbjct: 874 ---NFPNGIDISDAGDVLIGDSHGNRFHVAVFSRAGSLISEFECPYVKVSRCCGLK---I 927
Query: 301 MSNGNILVCDRENHRIQVF 319
S G I+ + NH + V
Sbjct: 928 TSEGYIVTLAKNNHHVLVL 946
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 87/190 (45%), Gaps = 20/190 (10%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
KFG +G GQ PH + +IV+D+NNHR+QIFD GTF +FG G
Sbjct: 685 KFGQLGPSKGQFNSPHGFCLGTDEDIIVADTNNHRIQIFD-------KTGTFKFQFGVPG 737
Query: 193 NKAGQLEHPHYIAVSNTN-RVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
+ GQL +P +AV N + +V D N R+QIF NG I +
Sbjct: 738 KEEGQLWYPRKVAVMRNNGKFVVCDRGNERSRMQIFTKNGHFIKKIAIR-----YIDIVA 792
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
G+AV QG+I DS + + + + G LR F C ++ +S VC
Sbjct: 793 GLAVTSQGHIVAVDSVSPTVFVISDTGDLLRWFDC-----SDYMREPSDIAISGKEYFVC 847
Query: 310 DRENHRIQVF 319
D + H + VF
Sbjct: 848 DFKGHCVVVF 857
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
+ FG G +GQ P G + I V D+ N+RIQIF G F FG G +G+
Sbjct: 684 SKFGQLGPSKGQFNSPHGFCLGTDEDIIVADTNNHRIQIFDKTGTFKFQFGVPGKEEGQL 743
Query: 293 KGLEGVAVM-SNGNILVCDR--ENHRIQVF 319
VAVM +NG +VCDR E R+Q+F
Sbjct: 744 WYPRKVAVMRNNGKFVVCDRGNERSRMQIF 773
>gi|291229458|ref|XP_002734690.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 722
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 44/258 (17%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
+ P G+ + V AD N+RV + DG + F A + P +A+S+ N
Sbjct: 472 LSKPWGLTINNHGDFVTADKRNNRVTIHDKDGNYKQSFEFTDQFAKPFK-PCDVAISDDN 530
Query: 157 RVIVSDSNNHRVQIFD----------------------VNGRVFQSD------------G 182
+ D NN +V + D V V+ SD G
Sbjct: 531 EYFMLDCNNKQVVVSDEKRKVIRKFGCSDKTIGIAINPVTKNVYVSDYITHCITKYTQGG 590
Query: 183 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
++ FG G++ + P ++A+++ V V DSNNH +Q+F+ + + + F S G +
Sbjct: 591 VYINSFGRKGDEQEEFNVPGFLAINSEGMVYVPDSNNHLIQVFNSDDQFMFEFSSTG--D 648
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE-FKGLEGVAVM 301
+ +P+GVA+D Y+ V + N++ + DGQF+ C D + GVAV
Sbjct: 649 STMSYPKGVAIDKNNYVYV--NSENKVTKYDSDGQFI----CRIDRDKDGLSRPHGVAVC 702
Query: 302 SNGNILVCDRENHRIQVF 319
++G I V D N+ I+VF
Sbjct: 703 NDGKIAVSDNNNNCIKVF 720
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 21/218 (9%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV--FLAFTWPRGIAVGP-DNSIVVA 114
P +A+ DN + D +N +V V D K + F GIA+ P ++ V+
Sbjct: 521 PCDVAISDDNEYFMLDCNNKQVVVS----DEKRKVIRKFGCSDKTIGIAINPVTKNVYVS 576
Query: 115 DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 174
D H + + G ++ FG G++ + P ++A+++ V V DSNNH +Q+F+
Sbjct: 577 DYITHCITKYTQGGVYINSFGRKGDEQEEFNVPGFLAINSEGMVYVPDSNNHLIQVFN-- 634
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
SD F+ +F S G+ + +P +A+ N V V+ N +V +D +G+ I
Sbjct: 635 -----SDDQFMFEFSSTGDST--MSYPKGVAIDKNNYVYVNSEN--KVTKYDSDGQFICR 685
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+ + L P GVAV + G I+V D+ NN I++F
Sbjct: 686 IDRD---KDGLSRPHGVAVCNDGKIAVSDNNNNCIKVF 720
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 83/192 (43%), Gaps = 16/192 (8%)
Query: 128 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK 187
G V G+ G GQL P + ++N + +D N+RV I D +G QS F +
Sbjct: 458 GGLVQTVGNTGQ--GQLSKPWGLTINNHGDFVTADKRNNRVTIHDKDGNYKQS-FEFTDQ 514
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
F P +A+S+ N + D NN +V + D +VI FG G
Sbjct: 515 FAKPFK-------PCDVAISDDNEYFMLDCNNKQVVVSDEKRKVIRKFGCSDKTIGIAIN 567
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P V Y+S D + I +T G ++ +FG G EF +A+ S G +
Sbjct: 568 P----VTKNVYVS--DYITHCITKYTQGGVYINSFGRKGDEQEEFNVPGFLAINSEGMVY 621
Query: 308 VCDRENHRIQVF 319
V D NH IQVF
Sbjct: 622 VPDSNNHLIQVF 633
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 16/133 (12%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------AFT 98
G +G E F P +A+ + + V DS+NH +QV F+ +F +
Sbjct: 597 GRKGDEQEEFNVPGFLAINSEGMVYVPDSNNHLIQV----FNSDDQFMFEFSSTGDSTMS 652
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P+G+A+ +N + V +S ++V + SDG F+ + +K G L PH +AV N ++
Sbjct: 653 YPKGVAIDKNNYVYV--NSENKVTKYDSDGQFICRIDR--DKDG-LSRPHGVAVCNDGKI 707
Query: 159 IVSDSNNHRVQIF 171
VSD+NN+ +++F
Sbjct: 708 AVSDNNNNCIKVF 720
>gi|260833178|ref|XP_002611534.1| hypothetical protein BRAFLDRAFT_117187 [Branchiostoma floridae]
gi|229296905|gb|EEN67544.1| hypothetical protein BRAFLDRAFT_117187 [Branchiostoma floridae]
Length = 3145
Score = 92.8 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 81/279 (29%), Positives = 124/279 (44%), Gaps = 38/279 (13%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------ 95
+ G +G+EPG F G+AV DN I VAD+ N+RVQV N FL
Sbjct: 285 KITFGGKGNEPGKFRLNYGVAVSDDNEIFVADNVNNRVQV------FSINGSFLRLFPTV 338
Query: 96 -------AFTWPRGIAVGPDN----SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQL 144
F GI V P ++ N RV ++ DG + KF + G+
Sbjct: 339 VPGEDTKIFPVSVGIGVEPGYLWVIGVLYGAELNARVVKYRRDGLIIEKFDV--HLMGRY 396
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYI 204
P N+VIV +++ R+ FQ +G+ V F + + G +
Sbjct: 397 PCPIIAIDVRNNKVIVGEADTIRM---------FQPNGSLVRSFKAFSKERGVRIN---- 443
Query: 205 AVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDS 264
V + N + +N VQ++ G I FG+ G +EGQL+ +G+++ G+I V +S
Sbjct: 444 GVISDNEGNIFLTNYKSVQVYSHLGVKIFEFGNFGRDEGQLRSLKGISIGPLGHIIVANS 503
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
GNNR+ +FT G+F+R G G +G +SN
Sbjct: 504 GNNRVDMFTSQGKFVRTVANITDPWGLAVGPDGQLAVSN 542
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 54/232 (23%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG---RVF------------ 178
FG GN+ G+ + +AVS+ N + V+D+ N+RVQ+F +NG R+F
Sbjct: 288 FGGKGNEPGKFRLNYGVAVSDDNEIFVADNVNNRVQVFSINGSFLRLFPTVVPGEDTKIF 347
Query: 179 -------------------------------QSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
+ DG + KF + G+ P
Sbjct: 348 PVSVGIGVEPGYLWVIGVLYGAELNARVVKYRRDGLIIEKFDV--HLMGRYPCPIIAIDV 405
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
N+VIV +++ +++F NG ++ SF + E G GV D++G I + +
Sbjct: 406 RNNKVIVGEADT--IRMFQPNGSLVRSFKAFSKERGVRI--NGVISDNEGNIFL--TNYK 459
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+Q+++ G + FG +G +G+ + L+G+++ G+I+V + N+R+ +F
Sbjct: 460 SVQVYSHLGVKIFEFGNFGRDEGQLRSLKGISIGPLGHIIVANSGNNRVDMF 511
>gi|260794810|ref|XP_002592400.1| hypothetical protein BRAFLDRAFT_67265 [Branchiostoma floridae]
gi|229277619|gb|EEN48411.1| hypothetical protein BRAFLDRAFT_67265 [Branchiostoma floridae]
Length = 314
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 133/296 (44%), Gaps = 41/296 (13%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---- 98
G G EPG F+ P GI V + I VAD NHRVQV F L++ V T
Sbjct: 36 LTFGGEGPEPGQFSRPLGITVSEEGEIFVADMKNHRVQV----FTLQSRLVRHFPTVVQE 91
Query: 99 --------W----PRGIAVGPDNSIVVA---DSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
W P + + + ++ VA +SS V+ + G +G + Q
Sbjct: 92 CRTREEKEWNKMCPHNVNMDGEGTLWVAGNTESSELAVR-YDKQGRVLGTI-----ELTQ 145
Query: 144 LEHPHYIAV-SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
E IAV + N +++ R I VF+ T V ++G + G ++ P
Sbjct: 146 TEQIIAIAVDTKRNHILIPQITGER-PILHGEVLVFRPCRTIV---RTVGLEKG-MKDPG 200
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
I V ++VSD N V ++ +G+ + FG EGS EGQL P G+ D G I V
Sbjct: 201 NITVDGEGNMLVSDCENDCVYVYAQDGQFLFKFGGEGSGEGQLLGPMGICTDKAGNIIVA 260
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
D GN+R+++F G+FL+ + + G+A+ G +++ D +NH + +
Sbjct: 261 DRGNSRLEMFDKTGKFLKHIYL------DIESPWGIAMAPQGQLVITDFDNHTVTI 310
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 107/262 (40%), Gaps = 49/262 (18%)
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
GP+ + + +H Q + FG G + GQ P I VS + V+D N
Sbjct: 10 GPEPASMGVMGHHHGNQRYTLASVQTLTFGGEGPEPGQFSRPLGITVSEEGEIFVADMKN 69
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH----------------------- 202
HRVQ+F + R+ + T V + + K PH
Sbjct: 70 HRVQVFTLQSRLVRHFPTVVQECRTREEKEWNKMCPHNVNMDGEGTLWVAGNTESSELAV 129
Query: 203 ----------YIAVSNTNRVIVSDSNNHRVQIFD---------VNGRVI------TSFGS 237
I ++ T ++I + R I ++G V+ T +
Sbjct: 130 RYDKQGRVLGTIELTQTEQIIAIAVDTKRNHILIPQITGERPILHGEVLVFRPCRTIVRT 189
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
G E+G +K P + VD +G + V D N+ + ++ DGQFL FG GSG+G+ G G
Sbjct: 190 VGLEKG-MKDPGNITVDGEGNMLVSDCENDCVYVYAQDGQFLFKFGGEGSGEGQLLGPMG 248
Query: 298 VAVMSNGNILVCDRENHRIQVF 319
+ GNI+V DR N R+++F
Sbjct: 249 ICTDKAGNIIVADRGNSRLEMF 270
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y Q + FK G GS G P GI +I+VAD N R+++ F ++
Sbjct: 223 YAQDGQFLFKFGGEGSGEGQLLGPMGICTDKAGNIIVADRGNSRLEM-FDKTGKFLKHIY 281
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
L P GIA+ P +V+ D NH V + ++
Sbjct: 282 LDIESPWGIAMAPQGQLVITDFDNHTVTIVRN 313
>gi|261289253|ref|XP_002603069.1| hypothetical protein BRAFLDRAFT_63298 [Branchiostoma floridae]
gi|229288386|gb|EEN59081.1| hypothetical protein BRAFLDRAFT_63298 [Branchiostoma floridae]
Length = 694
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 112/279 (40%), Gaps = 74/279 (26%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM--------------GNKAG 142
F+ P G+ V I VAD N R+QVF GTFV KF + G
Sbjct: 405 FSNPTGVTVSERGQIFVADRENQRIQVFILQGTFVRKFTTRVFPDSEDSCYCFTSSLSDG 464
Query: 143 QLEHPHYIAVSN-------------------------------------TNRVIVSDSNN 165
Q P+ +A+ RV V N
Sbjct: 465 QKMRPYDVAMDGKGKLWVLGILDVHTEFAVQYNKHGEVLRSFELKSTGWAKRVAVDARRN 524
Query: 166 HRVQIFDVNGR--------VFQSDGTFVGKFG--------SMGNKAGQLEHPHYIAVSNT 209
H + R VF+ DGT V G +MG G ++ P Y+ V
Sbjct: 525 HILITQTTGDRDNRQGEVLVFRPDGTLVRTMGGDSKTDFFNMGQPQG-MKFPQYLTVDGE 583
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
++V+D ++H V +++ +G+ + FGS+GS EGQL +P G+ D G I V D GNNR+
Sbjct: 584 GNILVTDCDSHCVVVYNEHGQFLFQFGSKGSGEGQLDYPLGICTDRAGNIIVADYGNNRV 643
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
++F G+FL+ + +A+ + G ++V
Sbjct: 644 EMFDKTGRFLKHIA------TDLDAPLAIAMATQGQLVV 676
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 66/252 (26%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG--------RVFQ------ 179
FG G+ G +P + VS ++ V+D N R+Q+F + G RVF
Sbjct: 395 FGGEGSGTGYFSNPTGVTVSERGQIFVADRENQRIQVFILQGTFVRKFTTRVFPDSEDSC 454
Query: 180 -------SDGTFV----------GKFGSMG------------NKAGQLEHPHYIAVSN-T 209
SDG + GK +G NK G++ + +
Sbjct: 455 YCFTSSLSDGQKMRPYDVAMDGKGKLWVLGILDVHTEFAVQYNKHGEVLRSFELKSTGWA 514
Query: 210 NRVIVSDSNNH---------------RVQIFDVNGRVITSFGSEGSEE----GQ---LKF 247
RV V NH V +F +G ++ + G + + GQ +KF
Sbjct: 515 KRVAVDARRNHILITQTTGDRDNRQGEVLVFRPDGTLVRTMGGDSKTDFFNMGQPQGMKF 574
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P+ + VD +G I V D ++ + ++ GQFL FG GSG+G+ G+ GNI+
Sbjct: 575 PQYLTVDGEGNILVTDCDSHCVVVYNEHGQFLFQFGSKGSGEGQLDYPLGICTDRAGNII 634
Query: 308 VCDRENHRIQVF 319
V D N+R+++F
Sbjct: 635 VADYGNNRVEMF 646
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 17/134 (12%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
+P+ + V + +I+V D +H V V+ G F+ +FGS G+ GQL++P I
Sbjct: 572 MKFPQYLTVDGEGNILVTDCDSHCVVVYNEHGQFLFQFGSKGSGEGQLDYPLGICTDRAG 631
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+IV+D N+RV++FD GR + T L+ P IA++ +++V+
Sbjct: 632 NIIVADYGNNRVEMFDKTGRFLKHIAT-------------DLDAPLAIAMATQGQLVVTC 678
Query: 217 ----SNNHRVQIFD 226
SN H+V +F+
Sbjct: 679 FHKLSNIHKVAVFN 692
>gi|403182718|gb|EJY57589.1| AAEL017329-PA [Aedes aegypti]
Length = 1148
Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 48/113 (42%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
F VNGR + KFGS+G GQ PH + ++V+D+NNHR++IF+ NG
Sbjct: 865 FQVNGRTKATPMQIRCKFGSLGQTKGQFNSPHGFCLGVDEEIVVADTNNHRIEIFEKNGT 924
Query: 231 VITSFGSEGSEEGQLKFPRGVAV-DDQGYISVGDSGN--NRIQIFTPDGQFLR 280
SFG G EEGQL +PR VAV V D GN +R+QIF+ +G F++
Sbjct: 925 FKFSFGVPGKEEGQLFYPRKVAVMRSSAKFVVCDRGNERSRMQIFSKNGHFIK 977
Score = 92.4 bits (228), Expect = 3e-16, Method: Composition-based stats.
Identities = 74/266 (27%), Positives = 118/266 (44%), Gaps = 58/266 (21%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G +G D IVVAD++NHR+++F+ +GTF FG G + GQL +P +AV ++
Sbjct: 892 FNSPHGFCLGVDEEIVVADTNNHRIEIFEKNGTFKFSFGVPGKEEGQLFYPRKVAVMRSS 951
Query: 157 -RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVSNTNRVI 213
+ +V D N R ++ ++F +G F+ K + AG +AV+N ++
Sbjct: 952 AKFVVCDRGNERSRM-----QIFSKNGHFIKKIAIRYIDIVAG-------LAVTNKGLIV 999
Query: 214 VSDSNNHRVQIFDVNGRVITSF---------------GSE-------------GSEEGQL 245
DS + V I +G +I F GS+ SEEG
Sbjct: 1000 AVDSVSPTVFIISEDGNLIHWFDCSDFMREPSDIAINGSDFYVCDFKGHCVAVFSEEGTF 1059
Query: 246 K----------FPRGVAVDDQGYISVGDSGNNRIQI--FTPDGQFLRAFGCWGSGDGEFK 293
K FP G+ + D G + +GDS NR + ++ DGQ + C
Sbjct: 1060 KYRIGSEKVTCFPNGIDISDAGDVLIGDSHGNRFHVACYSKDGQLQSEYECPYVKVSRCC 1119
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
GL+ + S G ++ + NH + V
Sbjct: 1120 GLK---ITSEGYVVTLAKNNHHVLVL 1142
Score = 90.5 bits (223), Expect = 8e-16, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 90/190 (47%), Gaps = 20/190 (10%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
KFGS+G GQ PH + ++V+D+NNHR++IF+ N GTF FG G
Sbjct: 881 KFGSLGQTKGQFNSPHGFCLGVDEEIVVADTNNHRIEIFEKN-------GTFKFSFGVPG 933
Query: 193 NKAGQLEHPHYIAVSNTN-RVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
+ GQL +P +AV ++ + +V D N R+QIF NG I +
Sbjct: 934 KEEGQLFYPRKVAVMRSSAKFVVCDRGNERSRMQIFSKNGHFIKKIAIR-----YIDIVA 988
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
G+AV ++G I DS + + I + DG + F C +F ++ + VC
Sbjct: 989 GLAVTNKGLIVAVDSVSPTVFIISEDGNLIHWFDC-----SDFMREPSDIAINGSDFYVC 1043
Query: 310 DRENHRIQVF 319
D + H + VF
Sbjct: 1044 DFKGHCVAVF 1053
>gi|290977513|ref|XP_002671482.1| predicted protein [Naegleria gruberi]
gi|284085051|gb|EFC38738.1| predicted protein [Naegleria gruberi]
Length = 344
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 26/236 (11%)
Query: 55 FTWPRGIAVGPDNSIV-VADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVV 113
F+ P + V + ++ V DS N+ +QV F+L T + W I G D +
Sbjct: 59 FSNPYDMCVDNNQELIFVCDSGNNAIQV----FELNT------YEWKYKIDCGADIPFYI 108
Query: 114 ADSSNHRVQVFQSDGTFVGKFGSMGN----KAGQLEHPHYIAV---SNTNRVIVSDSNNH 166
+ +F S+ + K+ G G P IA+ S + + D N+
Sbjct: 109 EFNPEDSTILFGSNDNTLYKYSVFGKLIWKTTGGFNLPSGIAIDFNSKERNIYLCDQANN 168
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
R+ + D S+G +V +FG G+ + I N + +I++D NHRVQI
Sbjct: 169 RILVLD-------SNGNYVREFGKHGSGNLEFIQSRNICFGNDDNLIITDRYNHRVQIIS 221
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQ-GYISVGDSGNNRIQIFTPDGQFLRA 281
G+ I SFG G E G+ P V V+ + G I V DS N+RIQIFT +G++L +
Sbjct: 222 KEGKFIKSFGKRGRENGEFNEPCSVCVEKRTGNIYVSDSFNDRIQIFTSEGEYLES 277
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 27/230 (11%)
Query: 97 FTWPRGIAVGPDNSIV-VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F+ P + V + ++ V DS N+ +QVF+ + T+ K+ G + P YI +
Sbjct: 59 FSNPYDMCVDNNQELIFVCDSGNNAIQVFELN-TYEWKYKI---DCGA-DIPFYIEFNPE 113
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV---SNTNRV 212
+ I+ SN++ + + V G++ + G P IA+ S +
Sbjct: 114 DSTILFGSNDNTLYKYSVFGKL-------------IWKTTGGFNLPSGIAIDFNSKERNI 160
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF--PRGVAVDDQGYISVGDSGNNRIQ 270
+ D N+R+ + D NG + FG GS G L+F R + + + + D N+R+Q
Sbjct: 161 YLCDQANNRILVLDSNGNYVREFGKHGS--GNLEFIQSRNICFGNDDNLIITDRYNHRVQ 218
Query: 271 IFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMS-NGNILVCDRENHRIQVF 319
I + +G+F+++FG G +GEF V V GNI V D N RIQ+F
Sbjct: 219 IISKEGKFIKSFGKRGRENGEFNEPCSVCVEKRTGNIYVSDSFNDRIQIF 268
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 26/144 (18%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGI 103
+ G GS F R I G D+++++ D NHRVQ+ + F+ RG
Sbjct: 182 EFGKHGSGNLEFIQSRNICFGNDDNLIITDRYNHRVQI------ISKEGKFIKSFGKRGR 235
Query: 104 AVGPDN------------SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
G N +I V+DS N R+Q+F S+G ++ +++P I+
Sbjct: 236 ENGEFNEPCSVCVEKRTGNIYVSDSFNDRIQIFTSEGEYL-------ESVTGVDYPLGIS 288
Query: 152 VSNTN-RVIVSDSNNHRVQIFDVN 174
+++ N ++V++ + RV I N
Sbjct: 289 LNDRNGDLLVTEWRSGRVVILKDN 312
>gi|322790223|gb|EFZ15222.1| hypothetical protein SINV_05658 [Solenopsis invicta]
Length = 1001
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 109/259 (42%), Gaps = 44/259 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G +G D I+VAD++NHR+Q+F GTF +FG G + GQL +P +AV N
Sbjct: 745 FNSPHGFCLGTDEDIIVADTNNHRIQIFDKTGTFKFQFGVPGKEEGQLWYPRKVAVMRNN 804
Query: 157 -RVIVSDSNNH--RVQIFDVNGRVFQ---------------------------SDGTFV- 185
+ +V D N R+QIF NG + S FV
Sbjct: 805 GKFVVCDRGNERSRMQIFTKNGHFIKKIAIRYIDIVAGLAVTSQGHIVAVDSVSPTVFVI 864
Query: 186 ---GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
G + + + P IA+S V D H V +F+ G+ + G E
Sbjct: 865 SDTGDLLRWFDCSDYMREPSDIAISG-KEYFVCDFKGHCVVVFNEEGKFLRRIGCENVT- 922
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNR--IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
FP G+ + D G + +GDS NR + +F+ G + F C GL+ +
Sbjct: 923 ---NFPNGIDISDAGDVLIGDSHGNRFHVAVFSRAGSLISEFECPYVKVSRCCGLK---I 976
Query: 301 MSNGNILVCDRENHRIQVF 319
S G I+ + NH + V
Sbjct: 977 TSEGYIVTLAKNNHHVLVL 995
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 87/190 (45%), Gaps = 20/190 (10%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
KFG +G GQ PH + +IV+D+NNHR+QIFD GTF +FG G
Sbjct: 734 KFGQLGPSKGQFNSPHGFCLGTDEDIIVADTNNHRIQIFD-------KTGTFKFQFGVPG 786
Query: 193 NKAGQLEHPHYIAVSNTN-RVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
+ GQL +P +AV N + +V D N R+QIF NG I +
Sbjct: 787 KEEGQLWYPRKVAVMRNNGKFVVCDRGNERSRMQIFTKNGHFIKKIAIR-----YIDIVA 841
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
G+AV QG+I DS + + + + G LR F C ++ +S VC
Sbjct: 842 GLAVTSQGHIVAVDSVSPTVFVISDTGDLLRWFDC-----SDYMREPSDIAISGKEYFVC 896
Query: 310 DRENHRIQVF 319
D + H + VF
Sbjct: 897 DFKGHCVVVF 906
>gi|427782471|gb|JAA56687.1| Putative vesicle coat complex copi beta' subunit [Rhipicephalus
pulchellus]
Length = 962
Score = 92.4 bits (228), Expect = 3e-16, Method: Composition-based stats.
Identities = 74/264 (28%), Positives = 112/264 (42%), Gaps = 54/264 (20%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNT 155
F+ P G +G + I+VAD++NHR+QVF G F FG G + GQL +P +AV ++
Sbjct: 706 FSSPHGFCLGLEEEIIVADTNNHRIQVFDKSGEFKYTFGVAGKEEGQLWYPRKVAVIKSS 765
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG------------SMGNK--------- 194
+ ++ D N R ++ ++F G F+ K + NK
Sbjct: 766 GKYVICDRGNERSRM-----QIFTKGGHFIKKIAIRYIDIVAGLAITAENKIVAVDSVSP 820
Query: 195 -------AGQL----------EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS 237
AG+L P IA+S I D H V +F+ G I G
Sbjct: 821 TVFVISEAGELLLWFDCSEYMREPSDIAISGREYYIC-DFKGHCVIVFNDEGHFIRKIGC 879
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNR--IQIFTPDGQFLRAFGCWGSGDGEFKGL 295
+G FP G+ + D G + VGDS NR + +F+ DG L F C GL
Sbjct: 880 ----DGMTNFPNGIDISDAGDVLVGDSHGNRFHVVVFSRDGLLLSEFECPYVKVSRCCGL 935
Query: 296 EGVAVMSNGNILVCDRENHRIQVF 319
+ + S G ++ + NH + V
Sbjct: 936 K---ITSEGYVVTLAKNNHHVLVL 956
Score = 87.0 bits (214), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
KFG +G GQ PH + +IV+D+NNHR+Q+FD +G +FG G EEGQL
Sbjct: 695 KFGQLGPSKGQFSSPHGFCLGLEEEIIVADTNNHRIQVFDKSGEFKYTFGVAGKEEGQLW 754
Query: 247 FPRGVAV-DDQGYISVGDSGN--NRIQIFTPDGQFLR 280
+PR VAV G + D GN +R+QIFT G F++
Sbjct: 755 YPRKVAVIKSSGKYVICDRGNERSRMQIFTKGGHFIK 791
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 94/227 (41%), Gaps = 53/227 (23%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
KFG +G GQ PH + +IV+D+NNHR+Q+FD G F FG G
Sbjct: 695 KFGQLGPSKGQFSSPHGFCLGLEEEIIVADTNNHRIQVFD-------KSGEFKYTFGVAG 747
Query: 193 NKAGQLEHPHYIAV-SNTNRVIVSDSNNH--RVQIFDVNGRVITSFG------------- 236
+ GQL +P +AV ++ + ++ D N R+QIF G I
Sbjct: 748 KEEGQLWYPRKVAVIKSSGKYVICDRGNERSRMQIFTKGGHFIKKIAIRYIDIVAGLAIT 807
Query: 237 SEG---------------SEEGQL----------KFPRGVAVDDQGYISVGDSGNNRIQI 271
+E SE G+L + P +A+ + Y + D + + +
Sbjct: 808 AENKIVAVDSVSPTVFVISEAGELLLWFDCSEYMREPSDIAISGREYY-ICDFKGHCVIV 866
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
F +G F+R GC DG G+ + G++LV D +R V
Sbjct: 867 FNDEGHFIRKIGC----DGMTNFPNGIDISDAGDVLVGDSHGNRFHV 909
>gi|427782469|gb|JAA56686.1| Putative vesicle coat complex copi beta' subunit [Rhipicephalus
pulchellus]
Length = 962
Score = 92.0 bits (227), Expect = 3e-16, Method: Composition-based stats.
Identities = 74/264 (28%), Positives = 112/264 (42%), Gaps = 54/264 (20%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNT 155
F+ P G +G + I+VAD++NHR+QVF G F FG G + GQL +P +AV ++
Sbjct: 706 FSSPHGFCLGLEEEIIVADTNNHRIQVFDKSGEFKYTFGVAGKEEGQLWYPRKVAVIKSS 765
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG------------SMGNK--------- 194
+ ++ D N R ++ ++F G F+ K + NK
Sbjct: 766 GKYVICDRGNERSRM-----QIFTKGGHFIKKIAIRYIDIVAGLAITAENKIVAVDSVSP 820
Query: 195 -------AGQL----------EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS 237
AG+L P IA+S I D H V +F+ G I G
Sbjct: 821 TVFVISEAGELLLWFDCSEYMREPSDIAISGREYYIC-DFKGHCVIVFNDEGHFIRKIGC 879
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNR--IQIFTPDGQFLRAFGCWGSGDGEFKGL 295
+G FP G+ + D G + VGDS NR + +F+ DG L F C GL
Sbjct: 880 ----DGMTNFPNGIDISDAGDVLVGDSHGNRFHVVVFSRDGLLLSEFECPYVKVSRCCGL 935
Query: 296 EGVAVMSNGNILVCDRENHRIQVF 319
+ + S G ++ + NH + V
Sbjct: 936 K---ITSEGYVVTLAKNNHHVLVL 956
Score = 87.0 bits (214), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
KFG +G GQ PH + +IV+D+NNHR+Q+FD +G +FG G EEGQL
Sbjct: 695 KFGQLGPSKGQFSSPHGFCLGLEEEIIVADTNNHRIQVFDKSGEFKYTFGVAGKEEGQLW 754
Query: 247 FPRGVAV-DDQGYISVGDSGN--NRIQIFTPDGQFLR 280
+PR VAV G + D GN +R+QIFT G F++
Sbjct: 755 YPRKVAVIKSSGKYVICDRGNERSRMQIFTKGGHFIK 791
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 94/227 (41%), Gaps = 53/227 (23%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
KFG +G GQ PH + +IV+D+NNHR+Q+FD G F FG G
Sbjct: 695 KFGQLGPSKGQFSSPHGFCLGLEEEIIVADTNNHRIQVFD-------KSGEFKYTFGVAG 747
Query: 193 NKAGQLEHPHYIAV-SNTNRVIVSDSNNH--RVQIFDVNGRVITSFG------------- 236
+ GQL +P +AV ++ + ++ D N R+QIF G I
Sbjct: 748 KEEGQLWYPRKVAVIKSSGKYVICDRGNERSRMQIFTKGGHFIKKIAIRYIDIVAGLAIT 807
Query: 237 SEG---------------SEEGQL----------KFPRGVAVDDQGYISVGDSGNNRIQI 271
+E SE G+L + P +A+ + Y + D + + +
Sbjct: 808 AENKIVAVDSVSPTVFVISEAGELLLWFDCSEYMREPSDIAISGREYY-ICDFKGHCVIV 866
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
F +G F+R GC DG G+ + G++LV D +R V
Sbjct: 867 FNDEGHFIRKIGC----DGMTNFPNGIDISDAGDVLVGDSHGNRFHV 909
>gi|260817250|ref|XP_002603500.1| hypothetical protein BRAFLDRAFT_220145 [Branchiostoma floridae]
gi|229288819|gb|EEN59511.1| hypothetical protein BRAFLDRAFT_220145 [Branchiostoma floridae]
Length = 218
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKF-GSMGNKAGQLEHPHYIAVSNT 155
F PRG+AV P + I VAD N R+QV G + + ++ + P IA+
Sbjct: 11 FNRPRGVAVSPKSEIFVADRDNRRIQVHNMKGETIRQIPTTVPGQENLTMRPDDIAIDGN 70
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+ + + S D + +F+ DG + +G G + P ++ + + ++VS
Sbjct: 71 DLLWIVGS--------DWSTEIFRPDGY---QLRRVGINQGMVA-PMFVTLDKEDNILVS 118
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D H V +D G + FG GS GQLK PRG+ VD G I V D GN R+++FT
Sbjct: 119 DYGTHSVYAYDQEGTFLFKFGGYGSGVGQLKDPRGICVDSSGNIIVADFGNKRLEMFTNR 178
Query: 276 GQFLR-AFGCWGSGDGEFKGLEGVAVMSNGN 305
G+FLR G DG G +G V++ N
Sbjct: 179 GKFLRHVTDSTGRPDGIAVGPDGQLVVTEWN 209
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 30/225 (13%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-LAFTWP--RG 102
G +GS+PG F PRG+AV P + I VAD N R+QV ++K + + T P
Sbjct: 2 GGKGSDPGKFNRPRGVAVSPKSEIFVADRDNRRIQV----HNMKGETIRQIPTTVPGQEN 57
Query: 103 IAVGPD------NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
+ + PD N ++ S+ ++F+ DG + +G G + P ++ + +
Sbjct: 58 LTMRPDDIAIDGNDLLWIVGSDWSTEIFRPDGY---QLRRVGINQGMVA-PMFVTLDKED 113
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++VSD H V +D +GTF+ KFG G+ GQL+ P I V ++ +IV+D
Sbjct: 114 NILVSDYGTHSVYAYD-------QEGTFLFKFGGYGSGVGQLKDPRGICVDSSGNIIVAD 166
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISV 261
N R+++F G+ + P G+AV G + V
Sbjct: 167 FGNKRLEMFTNRGKFLRHVTDSTGR------PDGIAVGPDGQLVV 205
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 11/186 (5%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G+ G+ P +AVS + + V+D +N R+Q+ ++ G + T ++
Sbjct: 1 FGGKGSDPGKFNRPRGVAVSPKSEIFVADRDNRRIQVHNMKGETIRQIPT------TVPG 54
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
+ P IA+ + + + S+ +IF +G + G +G + P V +
Sbjct: 55 QENLTMRPDDIAIDGNDLLWIVGSD-WSTEIFRPDGYQLRRVGIN---QGMVA-PMFVTL 109
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
D + I V D G + + + +G FL FG +GSG G+ K G+ V S+GNI+V D N
Sbjct: 110 DKEDNILVSDYGTHSVYAYDQEGTFLFKFGGYGSGVGQLKDPRGICVDSSGNIIVADFGN 169
Query: 314 HRIQVF 319
R+++F
Sbjct: 170 KRLEMF 175
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 24 IGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF 83
+ GT Y Q+ FK G GS G PRGI V +I+VAD N R+++ F
Sbjct: 117 VSDYGTHSVYAYDQEGTFLFKFGGYGSGVGQLKDPRGICVDSSGNIIVADFGNKRLEM-F 175
Query: 84 PHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
+ V + P GIAVGPD +VV + NH + S
Sbjct: 176 TNRGKFLRHVTDSTGRPDGIAVGPDGQLVVTE-WNHTASIIPS 217
>gi|170030554|ref|XP_001843153.1| B-box type zinc-finger protein ncl-1 [Culex quinquefasciatus]
gi|167867829|gb|EDS31212.1| B-box type zinc-finger protein ncl-1 [Culex quinquefasciatus]
Length = 1008
Score = 92.0 bits (227), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/113 (42%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
F VNGR + KFGS+G GQ PH + ++V+D+NNHR++IF+ NG
Sbjct: 725 FQVNGRTKATPMQIRCKFGSLGQTKGQFNSPHGFCLGVDEEIVVADTNNHRIEIFEKNGT 784
Query: 231 VITSFGSEGSEEGQLKFPRGVAV-DDQGYISVGDSGN--NRIQIFTPDGQFLR 280
SFG G EEGQL +PR VAV V D GN +R+QIF+ +G F++
Sbjct: 785 FKFSFGVPGKEEGQLFYPRKVAVMRSSAKFVVCDRGNERSRMQIFSKNGHFIK 837
Score = 92.0 bits (227), Expect = 3e-16, Method: Composition-based stats.
Identities = 74/266 (27%), Positives = 118/266 (44%), Gaps = 58/266 (21%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G +G D IVVAD++NHR+++F+ +GTF FG G + GQL +P +AV ++
Sbjct: 752 FNSPHGFCLGVDEEIVVADTNNHRIEIFEKNGTFKFSFGVPGKEEGQLFYPRKVAVMRSS 811
Query: 157 -RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVSNTNRVI 213
+ +V D N R ++ ++F +G F+ K + AG +AV+N ++
Sbjct: 812 AKFVVCDRGNERSRM-----QIFSKNGHFIKKIAIRYIDIVAG-------LAVTNKGLIV 859
Query: 214 VSDSNNHRVQIFDVNGRVITSF---------------GSE-------------GSEEGQL 245
DS + V I +G +I F GS+ SEEG
Sbjct: 860 AVDSVSPTVFIISEDGNLIHWFDCSDFMREPSDIAINGSDFYVCDFKGHCVAVFSEEGTF 919
Query: 246 K----------FPRGVAVDDQGYISVGDSGNNRIQI--FTPDGQFLRAFGCWGSGDGEFK 293
K FP G+ + D G + +GDS NR + ++ DGQ + C
Sbjct: 920 KYRIGSEKVTCFPNGIDISDAGDVLIGDSHGNRFHVACYSKDGQLQSEYECPYVKVSRCC 979
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
GL+ + S G ++ + NH + V
Sbjct: 980 GLK---ITSEGYVVTLAKNNHHVLVL 1002
Score = 90.5 bits (223), Expect = 1e-15, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 90/190 (47%), Gaps = 20/190 (10%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
KFGS+G GQ PH + ++V+D+NNHR++IF+ N GTF FG G
Sbjct: 741 KFGSLGQTKGQFNSPHGFCLGVDEEIVVADTNNHRIEIFEKN-------GTFKFSFGVPG 793
Query: 193 NKAGQLEHPHYIAVSNTN-RVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
+ GQL +P +AV ++ + +V D N R+QIF NG I +
Sbjct: 794 KEEGQLFYPRKVAVMRSSAKFVVCDRGNERSRMQIFSKNGHFIKKIAIR-----YIDIVA 848
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
G+AV ++G I DS + + I + DG + F C +F ++ + VC
Sbjct: 849 GLAVTNKGLIVAVDSVSPTVFIISEDGNLIHWFDC-----SDFMREPSDIAINGSDFYVC 903
Query: 310 DRENHRIQVF 319
D + H + VF
Sbjct: 904 DFKGHCVAVF 913
>gi|260811478|ref|XP_002600449.1| hypothetical protein BRAFLDRAFT_205227 [Branchiostoma floridae]
gi|229285736|gb|EEN56461.1| hypothetical protein BRAFLDRAFT_205227 [Branchiostoma floridae]
Length = 227
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 33/234 (14%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P +AV D + VAD+ N RVQVF +G F F + N P +AV
Sbjct: 13 FDRPMDVAVRGDR-LYVADTDNQRVQVFDLNGKFCSLFSTTSN-------PDGLAVQRDG 64
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
RV+V DS+ ++ +F ++DGT V + G +H + V ++V D
Sbjct: 65 RVVVVDSS-QKIFLF------VEADGTLVTQLKGQGFMQ---KHISSVCVDKEGNIVVVD 114
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN--------- 267
S+ H VQ+FD I FG G + + P GV+VD +G I + ++G+N
Sbjct: 115 SHQHCVQVFDSGLNFIRKFGEHGRQPQDMWGPTGVSVDSRGNIVLVNAGDNSDVGGVEHG 174
Query: 268 -RIQIFTPDGQFLRAFGCWGSGDGE-FKGLEGVAVMSNGNILVCDRENHRIQVF 319
++Q+F PDG ++ S DG+ +GVAV +G++ V D +H ++ +
Sbjct: 175 KKLQVFRPDGTWVSTI----SSDGDKLNKPQGVAVTEDGHVFVVDSADHCVRKY 224
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 121/242 (50%), Gaps = 30/242 (12%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL--KTNCVFLAFTWP 100
+ G++GS+ G F P +AV D + VAD+ N RVQV FDL K +F + P
Sbjct: 1 LRFGNKGSQQGQFDRPMDVAVRGDR-LYVADTDNQRVQV----FDLNGKFCSLFSTTSNP 55
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+AV D +VV DSS ++DGT V + G +H + V ++V
Sbjct: 56 DGLAVQRDGRVVVVDSSQKIFLFVEADGTLVTQLKGQGFMQ---KHISSVCVDKEGNIVV 112
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDSNN 219
DS+ H VQ+FD S F+ KFG G + + P ++V S N V+V+ +N
Sbjct: 113 VDSHQHCVQVFD-------SGLNFIRKFGEHGRQPQDMWGPTGVSVDSRGNIVLVNAGDN 165
Query: 220 ---------HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
++Q+F +G +++ S+G +L P+GVAV + G++ V DS ++ ++
Sbjct: 166 SDVGGVEHGKKLQVFRPDGTWVSTISSDGD---KLNKPQGVAVTEDGHVFVVDSADHCVR 222
Query: 271 IF 272
+
Sbjct: 223 KY 224
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 10/77 (12%)
Query: 235 FGSEGSEEGQLKFPRGVAVD-DQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
FG++GS++GQ P VAV D+ Y++ D+ N R+Q+F +G+F F + D
Sbjct: 3 FGNKGSQQGQFDRPMDVAVRGDRLYVA--DTDNQRVQVFDLNGKFCSLFSTTSNPD---- 56
Query: 294 GLEGVAVMSNGNILVCD 310
G+AV +G ++V D
Sbjct: 57 ---GLAVQRDGRVVVVD 70
>gi|260828566|ref|XP_002609234.1| hypothetical protein BRAFLDRAFT_90688 [Branchiostoma floridae]
gi|229294589|gb|EEN65244.1| hypothetical protein BRAFLDRAFT_90688 [Branchiostoma floridae]
Length = 725
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 129/292 (44%), Gaps = 54/292 (18%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV----------CFP-----HFDL-- 88
G +GS G P G+A D +I V + N R+Q+ FP +DL
Sbjct: 467 GRKGSGVGELDAPLGVAFDSDGNIAVVERGNKRIQIFNKDTGQSLRSFPIDGEKAYDLVV 526
Query: 89 KTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
+N +FL +W N ++ + +G + F K ++ PH
Sbjct: 527 DSNGMFLVTSW----------------GENFGLRRYSKEGKLLDTF-----KPDCMDDPH 565
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 208
+ V R++V + + + QSDG+ + + G GQL++P +++V
Sbjct: 566 GLTVLKDGRMVVVNRPEQTSCLL-----LLQSDGSLIREIGK-----GQLQNPVFVSVDE 615
Query: 209 TNRVI-VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+ VI V+D + H+V FD++G + FG +G +G+ + P GV VD G I V ++G+
Sbjct: 616 SRDVIFVTDKSAHKVFAFDLDGNLKFDFGRQGDIDGEFQNPEGVTVDRAGNIIVSNAGDG 675
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
R+Q+F DG F R G G V + +G + V H I+++
Sbjct: 676 RVQVFGLDGTFKRKLGTVEGGYA-----SSVVLTPDGYVAVACFHGHCIELY 722
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 20/106 (18%)
Query: 217 SNNHRVQI-------------FDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
+ NHR+++ +V G + + G +GS G+L P GVA D G I+V +
Sbjct: 435 TENHRLEVKVNSEQVPGSPFEIEVKGNPVLTTGRKGSGVGELDAPLGVAFDSDGNIAVVE 494
Query: 264 SGNNRIQIFTPD-GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
GN RIQIF D GQ LR+F DGE K + + V SNG LV
Sbjct: 495 RGNKRIQIFNKDTGQSLRSFPI----DGE-KAYD-LVVDSNGMFLV 534
>gi|111220793|ref|YP_711587.1| hypothetical protein FRAAL1337 [Frankia alni ACN14a]
gi|111148325|emb|CAJ59997.1| Hypothetical protein FRAAL1337 [Frankia alni ACN14a]
Length = 722
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 106/229 (46%), Gaps = 18/229 (7%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSS 117
P GIAVGPD S+++ DS N R+ P ++T V PR + V D I +AD+
Sbjct: 496 PAGIAVGPDGSLLITDSLNDRLCRVSPEGRIETVTVVSGLRRPRSVTVDGDGVIHLADTG 555
Query: 118 NHRVQVFQSDGT--FVGKFGSMGNKA-------GQLEHPHYIAVSNTNRVIVSDSNNHRV 168
NHRV DGT V G+ G+ L P +AV R++V+D + RV
Sbjct: 556 NHRVWRLDPDGTARVVAGSGTPGHSGDGGLAIHASLRGPQAVAVDAQGRLLVADQEHRRV 615
Query: 169 QIFDVNGRVFQSDGT-FVGKFGSMGN--KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
+ D GR+ GT + G+ + G +A + P +AV V V+DS N++V
Sbjct: 616 RRVDAAGRIETIAGTAYGGRPATAGGPARATDIGAPTSLAVGPDGIVYVADSANNQVLAL 675
Query: 226 --DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
D RV+ S S + PR VAV G + + G +RI I
Sbjct: 676 QGDSTLRVVASR----SGPVVVADPRQVAVGPDGTVYIAQPGRHRITII 720
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 125/305 (40%), Gaps = 51/305 (16%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHF--DLKTNCV----------FLAFTW------ 99
P G+AV PD +++V+ HR+ P F DL V +A T
Sbjct: 424 PFGVAVAPDRALIVSQPLLHRISRVDPEFLLDLAPTGVPPHGRGGGLSVVAGTGKAGRTG 483
Query: 100 ------------PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHP 147
P GIAVGPD S+++ DS N R+ + G+ ++ +G L P
Sbjct: 484 DGGPASDAELDSPAGIAVGPDGSLLITDSLNDRLCRVSPE----GRIETVTVVSG-LRRP 538
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNG--RVFQSDGTFVGKFGSMGNKA-GQLEHPHYI 204
+ V + ++D+ NHRV D +G RV GT G G G L P +
Sbjct: 539 RSVTVDGDGVIHLADTGNHRVWRLDPDGTARVVAGSGT-PGHSGDGGLAIHASLRGPQAV 597
Query: 205 AVSNTNRVIVSDSNNHRVQIFDVNGRVI----TSFGSEGSEEG------QLKFPRGVAVD 254
AV R++V+D + RV+ D GR+ T++G + G + P +AV
Sbjct: 598 AVDAQGRLLVADQEHRRVRRVDAAGRIETIAGTAYGGRPATAGGPARATDIGAPTSLAVG 657
Query: 255 DQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
G + V DS NN++ D LR SG VAV +G + + H
Sbjct: 658 PDGIVYVADSANNQVLALQGD-STLRVVASR-SGPVVVADPRQVAVGPDGTVYIAQPGRH 715
Query: 315 RIQVF 319
RI +
Sbjct: 716 RITII 720
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 32/202 (15%)
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQ------IFDVNGRVFQSDG--------TFVGKF 188
+++ P +AV+ +IVS HR+ + D+ G GK
Sbjct: 420 RIDSPFGVAVAPDRALIVSQPLLHRISRVDPEFLLDLAPTGVPPHGRGGGLSVVAGTGKA 479
Query: 189 GSMGNKA----GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQ 244
G G+ +L+ P IAV ++++DS N R+ GR+ T G
Sbjct: 480 GRTGDGGPASDAELDSPAGIAVGPDGSLLITDSLNDRLCRVSPEGRIETVTVVSG----- 534
Query: 245 LKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG--QFLRAFGCWG-SGDG------EFKGL 295
L+ PR V VD G I + D+GN+R+ PDG + + G G SGDG +G
Sbjct: 535 LRRPRSVTVDGDGVIHLADTGNHRVWRLDPDGTARVVAGSGTPGHSGDGGLAIHASLRGP 594
Query: 296 EGVAVMSNGNILVCDRENHRIQ 317
+ VAV + G +LV D+E+ R++
Sbjct: 595 QAVAVDAQGRLLVADQEHRRVR 616
>gi|260782166|ref|XP_002586162.1| hypothetical protein BRAFLDRAFT_109858 [Branchiostoma floridae]
gi|229271255|gb|EEN42173.1| hypothetical protein BRAFLDRAFT_109858 [Branchiostoma floridae]
Length = 616
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 118/272 (43%), Gaps = 60/272 (22%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV---- 152
F P G+AV + I VAD N R+QVF GTFV +F ++ + ++ +PH +A+
Sbjct: 353 FQGPVGVAVSDEGEIFVADYWNQRIQVFTLQGTFVRQFLTVVSGEEKM-YPHDVAMDGEG 411
Query: 153 --------------------------------SNTNRVIVSDSNNHRVQIFDVNGR---- 176
+ +R + D+ + + I G
Sbjct: 412 NQWVVGMTEFHAGFAVQYNKHGRMLRKFDLQKTGRSRGVAVDTRRNHILITQATGDWPNY 471
Query: 177 -----VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
V + DG+ V G G P YI V ++VSD +NH V +++ +G+
Sbjct: 472 HGEVLVLRPDGSLVRTVGQQQRMKG----PQYITVDVEGNILVSDYDNHCVYVYNEDGQF 527
Query: 232 ITSFGSEGSE----EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGS 287
+ G GS EG+L +PRG+ D G I V D GN+R+Q+F G+F + +
Sbjct: 528 LFQCGGNGSSCNRGEGKLLWPRGICTDRAGNIIVADYGNSRVQMFDKTGKFRKHI----T 583
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D ++ VA+ G ++V D +N + VF
Sbjct: 584 TDMQYPC--AVAMAPQGQLVVTDDKNDSVSVF 613
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
+FG +GS G+ + P GVAV D+G I V D N RIQ+FT G F+R F SG+ +
Sbjct: 342 TFGGKGSGTGKFQGPVGVAVSDEGEIFVADYWNQRIQVFTLQGTFVRQFLTVVSGEEKM 400
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 24/39 (61%)
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GSG G+F+G GVAV G I V D N RIQVF
Sbjct: 342 TFGGKGSGTGKFQGPVGVAVSDEGEIFVADYWNQRIQVF 380
>gi|260835691|ref|XP_002612841.1| hypothetical protein BRAFLDRAFT_67211 [Branchiostoma floridae]
gi|229298222|gb|EEN68850.1| hypothetical protein BRAFLDRAFT_67211 [Branchiostoma floridae]
Length = 636
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 114/269 (42%), Gaps = 57/269 (21%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGT--FV-------------------GKFG 135
F +P G+AV + I+VAD + R+QVF DG FV GK
Sbjct: 220 FEYPSGVAVSEEGEIIVADCYSKRIQVFSEDGAREFVTTIHGDETIEPSDVAIDGEGKLW 279
Query: 136 SMG-----------NKAGQLEHPHYIAVSNT-NRVIVSDSNNHRVQIFDVNGR------- 176
+G K GQ + V R I D + + + + G
Sbjct: 280 VVGYRNTADYAVRYTKLGQRLTMFKLQVETEWLRGIAVDVEKNHILVTQMTGEEPNLHGE 339
Query: 177 --VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
VF DGT V G+ +++P YI V R +V+DSNNH V I+ + ++
Sbjct: 340 VLVFTPDGTVVRTVGAQQG----MKYPRYITVDGEGRTLVADSNNHCVYIYK-DAQLQLK 394
Query: 235 FGSEGSE----EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
FG+ G + EG L PRGV D G I V DSGN R+++F G+FL+
Sbjct: 395 FGNTGKKKERSEGTLNNPRGVCTDSSGNIIVADSGNRRVKMFDKRGRFLKHVPT------ 448
Query: 291 EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ + VA+ G ++V D E + VF
Sbjct: 449 DTPRPQAVAMTPQGQLVVTDTEEDLVMVF 477
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 26/182 (14%)
Query: 57 WPRGIAVGPD-NSIVVADSSNHR------VQVCFPHFDL-KTNCVFLAFTWPRGIAVGPD 108
W RGIAV + N I+V + V V P + +T +PR I V +
Sbjct: 311 WLRGIAVDVEKNHILVTQMTGEEPNLHGEVLVFTPDGTVVRTVGAQQGMKYPRYITVDGE 370
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKA----GQLEHPHYIAVSNTNRVIVSDSN 164
+VADS+NH V +++ D KFG+ G K G L +P + ++ +IV+DS
Sbjct: 371 GRTLVADSNNHCVYIYK-DAQLQLKFGNTGKKKERSEGTLNNPRGVCTDSSGNIIVADSG 429
Query: 165 NHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 224
N RV++FD GR + T + P +A++ +++V+D+ V +
Sbjct: 430 NRRVKMFDKRGRFLKHVPTDTPR-------------PQAVAMTPQGQLVVTDTEEDLVMV 476
Query: 225 FD 226
FD
Sbjct: 477 FD 478
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 31/194 (15%)
Query: 138 GNKAGQ--LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA 195
GN AG+ E+P +AVS +IV+D + R+Q VF DG +F + +
Sbjct: 212 GNGAGESPFEYPSGVAVSEEGEIIVADCYSKRIQ-------VFSEDG--AREFVTTIHGD 262
Query: 196 GQLEHPHYIAVSNTNRVIV---SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
+E P +A+ ++ V ++ ++ V+ + G+ +T F + E + RG+A
Sbjct: 263 ETIE-PSDVAIDGEGKLWVVGYRNTADYAVRYTKL-GQRLTMFKLQVETE----WLRGIA 316
Query: 253 VD-DQGYISV----GDSGN--NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
VD ++ +I V G+ N + +FTPDG +R G K + V G
Sbjct: 317 VDVEKNHILVTQMTGEEPNLHGEVLVFTPDGTVVRTVGAQQG----MKYPRYITVDGEGR 372
Query: 306 ILVCDRENHRIQVF 319
LV D NH + ++
Sbjct: 373 TLVADSNNHCVYIY 386
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 14/114 (12%)
Query: 40 RLQFKIGSRGSEP----GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK---TNC 92
+LQ K G+ G + G PRG+ +I+VADS N RV++ FD +
Sbjct: 390 QLQLKFGNTGKKKERSEGTLNNPRGVCTDSSGNIIVADSGNRRVKM----FDKRGRFLKH 445
Query: 93 VFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH 146
V P+ +A+ P +VV D+ V VF S +G + EH
Sbjct: 446 VPTDTPRPQAVAMTPQGQLVVTDTEEDLVMVFDS---LLGSMKCGSERCATCEH 496
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
T G G+ E ++P GVAV ++G I V D + RIQ+F+ DG R F GD
Sbjct: 208 TLIGGNGAGESPFEYPSGVAVSEEGEIIVADCYSKRIQVFSEDG--AREFVTTIHGDETI 265
Query: 293 KGLEGVAVMSNGNILVCDREN 313
+ + VA+ G + V N
Sbjct: 266 EPSD-VAIDGEGKLWVVGYRN 285
>gi|260824627|ref|XP_002607269.1| hypothetical protein BRAFLDRAFT_88217 [Branchiostoma floridae]
gi|229292615|gb|EEN63279.1| hypothetical protein BRAFLDRAFT_88217 [Branchiostoma floridae]
Length = 661
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 129/283 (45%), Gaps = 33/283 (11%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-----CFP---HFDLKTNCVFLA 96
+G +GS G F P +AV D IV +D +N R+Q F D K+ CV A
Sbjct: 402 VGQKGSGDGQFNCPTSVAVTTDGDIVASDFNNSRLQFFDNDGSFKRKVELDFKSECV-TA 460
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
T + G ++I V D +V Q G + G IA +
Sbjct: 461 LTNGDLLVTGDGHNIHVLDKQERESRVIQVTGAAEKDKNTEG-----------IAFDSLG 509
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
R++V+ Q+ V G + KFG G +L + V+++N++I+SD
Sbjct: 510 RIVVTIG----YQVL-----VLSFSGDNILKFGDKGQGQQKLSSCLRVTVNSSNQIIISD 560
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
NH ++IFD GR + + GS G+ GQL P + D + I V + N+R+ +F+ DG
Sbjct: 561 CGNHNLKIFDPTGRHLFTCGSYGTGPGQLSGPYCIITDSEDNIVVAEYWNHRVSMFSEDG 620
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F+R G + L G+ + +G+++V D NH +++F
Sbjct: 621 TFIRHV-LTREEHGLYYPL-GLTLTPDGHLVVSD--NHSMKIF 659
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 33/222 (14%)
Query: 129 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV-------FQSD 181
T + G G+ GQ P +AV+ ++ SD NN R+Q FD +G F+S+
Sbjct: 397 TLLKTVGQKGSGDGQFNCPTSVAVTTDGDIVASDFNNSRLQFFDNDGSFKRKVELDFKSE 456
Query: 182 GTFVGKFGSM------------------------GNKAGQLEHPHYIAVSNTNRVIVSDS 217
G + A + ++ IA + R++V +
Sbjct: 457 CVTALTNGDLLVTGDGHNIHVLDKQERESRVIQVTGAAEKDKNTEGIAFDSLGRIVV--T 514
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
++V + +G I FG +G + +L V V+ I + D GN+ ++IF P G+
Sbjct: 515 IGYQVLVLSFSGDNILKFGDKGQGQQKLSSCLRVTVNSSNQIIISDCGNHNLKIFDPTGR 574
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L G +G+G G+ G + S NI+V + NHR+ +F
Sbjct: 575 HLFTCGSYGTGPGQLSGPYCIITDSEDNIVVAEYWNHRVSMF 616
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT- 98
R F GS G+ PG + P I +++IVVA+ NHRV + F + T
Sbjct: 574 RHLFTCGSYGTGPGQLSGPYCIITDSEDNIVVAEYWNHRVSM----FSEDGTFIRHVLTR 629
Query: 99 ------WPRGIAVGPDNSIVVADSSNHRVQVFQ 125
+P G+ + PD +VV+D NH +++F+
Sbjct: 630 EEHGLYYPLGLTLTPDGHLVVSD--NHSMKIFK 660
>gi|296132931|ref|YP_003640178.1| NHL repeat containing protein, partial [Thermincola potens JR]
gi|296031509|gb|ADG82277.1| NHL repeat containing protein [Thermincola potens JR]
Length = 322
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
K + + G GS PG ++P GIA D +IVV ++ N RVQ P D FL
Sbjct: 96 NKGKYLYSFGGFGSIPGKLSYPYGIARLSDGNIVVTEAGNRRVQKFSPQGD------FLG 149
Query: 97 FTWPRGIAVGPDN----------SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH 146
F P AVG D +I + D S ++V V + G + G +++
Sbjct: 150 FIVPTDNAVGLDKPGPVRVDARGNIYIGDLSGNKVIVLDATGKLI-------RTVGNVQY 202
Query: 147 PHYIAV-SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
PH IA+ NR+ V+ + +++F + + + +F +G G I
Sbjct: 203 PHGIALDEKNNRLYVASAGTGNIKVFPLTEN--KKEDNNAPEFSGLGLVRG-------ID 253
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG 265
V + V DS V+ FD NG+ SFG G+++G + +P G+ V + G + V D G
Sbjct: 254 VDEHGNLYVVDSIAGMVRTFDFNGKPGLSFGGSGNDDGSMLYPNGIDVGEDGRVYVADWG 313
Query: 266 NNRIQIF 272
NNRI ++
Sbjct: 314 NNRIVVW 320
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 139/337 (41%), Gaps = 52/337 (15%)
Query: 9 NINSCFLLQTLLVSGIGQVGTTPRSQYL-QKRRLQFKIGSRGSEPGCFTWPRGIAVGPD- 66
N+ + L T++V + T YL RR S G PG F + I D
Sbjct: 10 NLRTYLALLTVIV-----IITAALFTYLFYNRRSTLPAISVGPIPGNFNFVYNIYGSKDR 64
Query: 67 --------------NSIVVADSSNHRVQVCFPHFDLKTNCVFL---------AFTWPRGI 103
I VA++ H + V FD K ++ ++P GI
Sbjct: 65 KLLRPMSAFFEHNSKKIYVANTEGHSIDV----FDNKGKYLYSFGGFGSIPGKLSYPYGI 120
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 163
A D +IVV ++ N RVQ F G F+G N G L+ P + V + + D
Sbjct: 121 ARLSDGNIVVTEAGNRRVQKFSPQGDFLGFIVPTDNAVG-LDKPGPVRVDARGNIYIGDL 179
Query: 164 NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDSNNHRV 222
+ ++V + D G++ ++ G +++PH IA+ NR+ V+ + +
Sbjct: 180 SGNKVIVLDATGKLIRT--------------VGNVQYPHGIALDEKNNRLYVASAGTGNI 225
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
++F + + E L RG+ VD+ G + V DS ++ F +G+ +F
Sbjct: 226 KVFPLTEN--KKEDNNAPEFSGLGLVRGIDVDEHGNLYVVDSIAGMVRTFDFNGKPGLSF 283
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ DG G+ V +G + V D N+RI V+
Sbjct: 284 GGSGNDDGSMLYPNGIDVGEDGRVYVADWGNNRIVVW 320
>gi|260811167|ref|XP_002600294.1| hypothetical protein BRAFLDRAFT_204113 [Branchiostoma floridae]
gi|229285580|gb|EEN56306.1| hypothetical protein BRAFLDRAFT_204113 [Branchiostoma floridae]
Length = 248
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 37/240 (15%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE--HPHYIAVSN 154
F PR +AV + I V D +N R+QVF GTFV +F ++ N +G+ + +PH +A+
Sbjct: 22 FNGPRAVAVSGEGEIFVVDGANQRIQVFTQQGTFVQQFPTVANVSGEQQKMYPHDVAM-- 79
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
D G + GT +F NK G + + V+ R +
Sbjct: 80 -----------------DGEGNLLVVGGTDSAEFAVKYNKQGMMLWYLPLYVTKWERGVA 122
Query: 215 SDSNNHRVQIFDVNGRVITSFGSE---------------GSEEGQLKFPRGVAVDDQGYI 259
D+ + + I G G G ++G + +PRG+ D +G I
Sbjct: 123 MDTRRNHILITQTKGGWSNQQGEVNVLSQVEGVKLVRIVGQQQGMM-YPRGITTDVEGNI 181
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ D N+ + ++ DGQFL FG GSG+G+ G+ GNI+V D N R+++F
Sbjct: 182 LLSDWDNHCVFVYNEDGQFLFKFGGRGSGEGQMYNPHGICTDKEGNIIVADSGNSRVEMF 241
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%)
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
+PRGI + +I+++D NH V V+ DG F+ KFG G+ GQ+ +PH I
Sbjct: 166 GMMYPRGITTDVEGNILLSDWDNHCVFVYNEDGQFLFKFGGRGSGEGQMYNPHGICTDKE 225
Query: 156 NRVIVSDSNNHRVQIFDVNGR 176
+IV+DS N RV++FD GR
Sbjct: 226 GNIIVADSGNSRVEMFDKTGR 246
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+FG EGS GQ PR VAV +G I V D N RIQ+FT G F++ F + GE +
Sbjct: 11 TFGGEGSGTGQFNGPRAVAVSGEGEIFVVDGANQRIQVFTQQGTFVQQFPTVANVSGEQQ 70
Query: 294 GL--EGVAVMSNGNILVC 309
+ VA+ GN+LV
Sbjct: 71 KMYPHDVAMDGEGNLLVV 88
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG--SEEGQL 245
FG G+ GQ P +AVS + V D N R+Q+F G + F + S E Q
Sbjct: 12 FGGEGSGTGQFNGPRAVAVSGEGEIFVVDGANQRIQVFTQQGTFVQQFPTVANVSGEQQK 71
Query: 246 KFPRGVAVDDQGYISV 261
+P VA+D +G + V
Sbjct: 72 MYPHDVAMDGEGNLLV 87
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 22/39 (56%)
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GSG G+F G VAV G I V D N RIQVF
Sbjct: 11 TFGGEGSGTGQFNGPRAVAVSGEGEIFVVDGANQRIQVF 49
>gi|260824846|ref|XP_002607378.1| hypothetical protein BRAFLDRAFT_69791 [Branchiostoma floridae]
gi|229292725|gb|EEN63388.1| hypothetical protein BRAFLDRAFT_69791 [Branchiostoma floridae]
Length = 651
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 126/293 (43%), Gaps = 41/293 (13%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVAD--------SSNHRVQVCFPHFDLKTNCVFLAF 97
G GSE G F PRG+ V + I V D +S R+QV F L+ V F
Sbjct: 349 GGEGSENGQFEGPRGVTVSDEGEIFVVDKAYIRGTCTSYGRIQV----FTLQGTFV-RQF 403
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDG---------TFVGKFGSMGNKAGQ----L 144
P ++ + +A S + DG T+ ++ NK G+
Sbjct: 404 ETPIPLSSRRRDRYSLATSEWYYPNDVTVDGEGNLWVVGRTYTAEYAVQYNKQGEKLRTF 463
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIFDV-----NGRVFQSDGTFVGKFGSMGNK--AGQ 197
+ ++ + D+ + + I + N +VF+ DGT + G Q
Sbjct: 464 RLQKLVGYRDSEVAVAVDTRRNHILITQIKDSRSNVQVFRPDGTLLKTVGDKCKDFLLSQ 523
Query: 198 LE--HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD 255
LE +P I V ++VSD+ NH V ++ +G+ + FG EG EGQLK PRG+ D
Sbjct: 524 LELTYPVSITVDVKRNILVSDNGNHCVHVYSKSGQFLFQFGCEGRGEGQLKHPRGICTDR 583
Query: 256 QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
G I V D GNNR+++F G+F++ + K VA+ G ++V
Sbjct: 584 AGNIIVADHGNNRVEMFDKTGKFVKHI------TTDMKCPWAVAMAPQGQLVV 630
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 34/250 (13%)
Query: 97 FTWPRGIAVGPDNSIVVAD--------SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
F PRG+ V + I V D +S R+QVF GTFV +F + + + +
Sbjct: 358 FEGPRGVTVSDEGEIFVVDKAYIRGTCTSYGRIQVFTLQGTFVRQFETPIPLSSRRRDRY 417
Query: 149 YIAVSN---TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK---------AG 196
+A S N V V N V GR + ++ + ++ G K G
Sbjct: 418 SLATSEWYYPNDVTVDGEGN-----LWVVGRTYTAE--YAVQYNKQGEKLRTFRLQKLVG 470
Query: 197 QLEHPHYIAV-SNTNRVIVSDSNNHR--VQIFDVNGRVITSFGSEGSE----EGQLKFPR 249
+ +AV + N ++++ + R VQ+F +G ++ + G + + + +L +P
Sbjct: 471 YRDSEVAVAVDTRRNHILITQIKDSRSNVQVFRPDGTLLKTVGDKCKDFLLSQLELTYPV 530
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+ VD + I V D+GN+ + +++ GQFL FGC G G+G+ K G+ GNI+V
Sbjct: 531 SITVDVKRNILVSDNGNHCVHVYSKSGQFLFQFGCEGRGEGQLKHPRGICTDRAGNIIVA 590
Query: 310 DRENHRIQVF 319
D N+R+++F
Sbjct: 591 DHGNNRVEMF 600
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 34 QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPD---NSIVVADSSNHR--VQVCFPHFDL 88
+ L+ RLQ +G R SE +AV D N I++ + R VQV P L
Sbjct: 458 EKLRTFRLQKLVGYRDSE---------VAVAVDTRRNHILITQIKDSRSNVQVFRPDGTL 508
Query: 89 -KT---NC-----VFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGN 139
KT C L T+P I V +I+V+D+ NH V V+ G F+ +FG G
Sbjct: 509 LKTVGDKCKDFLLSQLELTYPVSITVDVKRNILVSDNGNHCVHVYSKSGQFLFQFGCEGR 568
Query: 140 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE 199
GQL+HP I +IV+D N+RV++FD G+ + T ++
Sbjct: 569 GEGQLKHPRGICTDRAGNIIVADHGNNRVEMFDKTGKFVKHITT-------------DMK 615
Query: 200 HPHYIAVSNTNRVIVS-----DS---NNHRVQIFDV 227
P +A++ +++V+ DS N H V IF +
Sbjct: 616 CPWAVAMAPQGQLVVTVGKEYDSYLENKHTVSIFHI 651
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGD--------SGNNRIQIFTPDGQFLRAF 282
+FG EGSE GQ + PRGV V D+G I V D + RIQ+FT G F+R F
Sbjct: 347 TFGGEGSENGQFEGPRGVTVSDEGEIFVVDKAYIRGTCTSYGRIQVFTLQGTFVRQF 403
>gi|443684180|gb|ELT88189.1| hypothetical protein CAPTEDRAFT_144583 [Capitella teleta]
Length = 782
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 113/261 (43%), Gaps = 46/261 (17%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNT 155
F P G +G D IVVAD++NHR+QVF+ G F +FG G + GQL +P +AV +
Sbjct: 524 FNSPHGFCLGMDEDIVVADTNNHRIQVFEKSGEFKYQFGIPGKEEGQLWYPRKVAVMRHC 583
Query: 156 NRVIVSDSNNH--RVQIFDVNGRVFQ-----------------------------SDGTF 184
+ +V D N R+QIF NG + S F
Sbjct: 584 GKYVVCDRGNERSRMQIFTKNGHFIKKIAIRYIDIVAGLAITEQGERNIVAVDSVSPTVF 643
Query: 185 -VGKFGSMG---NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGS 240
+G+ G + + + + P IA+S V D H V +F+ +G+ + G E
Sbjct: 644 CIGETGELVKWFDCSDYMREPSDIAISG-KEYFVCDFKGHCVVVFNEDGQFMRRIGCENI 702
Query: 241 EEGQLKFPRGVAVDDQGYISVGDSGNNR--IQIFTPDGQFLRAFGCWGSGDGEFKGLEGV 298
+P G+ + D G + VGDS NR + +F DG + F C GL
Sbjct: 703 ----TNYPNGIDISDHGDVLVGDSHGNRFHVAVFQSDGSLIGEFECPYVKVSRCCGLN-- 756
Query: 299 AVMSNGNILVCDRENHRIQVF 319
V S G+++ + NH + V
Sbjct: 757 -VTSEGHVVTLAKNNHHVLVL 776
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
KFG +G Q PH + ++V+D+NNHR+Q+F+ +G FG G EEGQL
Sbjct: 513 KFGQLGPGKSQFNSPHGFCLGMDEDIVVADTNNHRIQVFEKSGEFKYQFGIPGKEEGQLW 572
Query: 247 FPRGVAVDDQ-GYISVGDSGN--NRIQIFTPDGQFLRAFG 283
+PR VAV G V D GN +R+QIFT +G F++
Sbjct: 573 YPRKVAVMRHCGKYVVCDRGNERSRMQIFTKNGHFIKKIA 612
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 55/229 (24%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
KFG +G Q PH + ++V+D+NNHR+Q VF+ G F +FG G
Sbjct: 513 KFGQLGPGKSQFNSPHGFCLGMDEDIVVADTNNHRIQ-------VFEKSGEFKYQFGIPG 565
Query: 193 NKAGQLEHPHYIAV-SNTNRVIVSDSNNH--RVQIFDVNGRVITSF---------GSEGS 240
+ GQL +P +AV + + +V D N R+QIF NG I G +
Sbjct: 566 KEEGQLWYPRKVAVMRHCGKYVVCDRGNERSRMQIFTKNGHFIKKIAIRYIDIVAGLAIT 625
Query: 241 EEGQ-------------------------------LKFPRGVAVDDQGYISVGDSGNNRI 269
E+G+ ++ P +A+ + Y V D + +
Sbjct: 626 EQGERNIVAVDSVSPTVFCIGETGELVKWFDCSDYMREPSDIAISGKEYF-VCDFKGHCV 684
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
+F DGQF+R GC + G+ + +G++LV D +R V
Sbjct: 685 VVFNEDGQFMRRIGCENITNYP----NGIDISDHGDVLVGDSHGNRFHV 729
>gi|404476394|ref|YP_006707825.1| hypothetical protein B2904_orf1746 [Brachyspira pilosicoli B2904]
gi|404437883|gb|AFR71077.1| tetratricopeptide repeat-containing protein [Brachyspira pilosicoli
B2904]
Length = 700
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 110/245 (44%), Gaps = 34/245 (13%)
Query: 87 DLKTNCVFLA-FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG---------- 135
+ TN FL P I + D ++ V D S+ ++ F +G + K
Sbjct: 134 NFSTNANFLKNINQPIQIEMAEDGTLYVLDYSDSSLKQFDVNGNLIRKISNGKRLEEQQN 193
Query: 136 SMGNKAGQ----------LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFV 185
S KA Q LE+P + N + ++ N R +IF + ++G ++
Sbjct: 194 SWWRKAIQFVTRVYPYEKLENPRGFTIDNDGYIYIA--NTKRDKIFK-----YDNNGNYI 246
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL 245
G+ G GQL P + N R+ VSD+ N+R+ +FDVNG + SFG G EG+
Sbjct: 247 TNIGNTGISNGQLLGPSSLYADNGGRLYVSDTGNNRIVVFDVNGNYLDSFGKMGENEGEF 306
Query: 246 KFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
P G+ VD+ YI V D GN R+Q F +G ++ F G++ S+GN
Sbjct: 307 FSPAGIVVDN-NYIYVADMGNKRVQKFDLNGNYISTIKH-----DLFNEPRGLSFASDGN 360
Query: 306 ILVCD 310
+ + D
Sbjct: 361 LFIAD 365
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 14/207 (6%)
Query: 126 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ--SDGT 183
S+ ++ F + N + P I ++ + V D ++ ++ FDVNG + + S+G
Sbjct: 127 SNFIYLKNFSTNANFLKNINQPIQIEMAEDGTLYVLDYSDSSLKQFDVNGNLIRKISNGK 186
Query: 184 -FVGKFGSMGNKAGQ----------LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
+ S KA Q LE+P + N + ++++ ++ +D NG I
Sbjct: 187 RLEEQQNSWWRKAIQFVTRVYPYEKLENPRGFTIDNDGYIYIANTKRDKIFKYDNNGNYI 246
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
T+ G+ G GQL P + D+ G + V D+GNNRI +F +G +L +FG G +GEF
Sbjct: 247 TNIGNTGISNGQLLGPSSLYADNGGRLYVSDTGNNRIVVFDVNGNYLDSFGKMGENEGEF 306
Query: 293 KGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ V+ N I V D N R+Q F
Sbjct: 307 FSPAGI-VVDNNYIYVADMGNKRVQKF 332
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----AFTWPR 101
G G G F P GI V +N I VAD N RVQ FDL N + F PR
Sbjct: 297 GKMGENEGEFFSPAGIVVD-NNYIYVADMGNKRVQ----KFDLNGNYISTIKHDLFNEPR 351
Query: 102 GIAVGPDNSIVVADSS 117
G++ D ++ +AD S
Sbjct: 352 GLSFASDGNLFIADGS 367
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 21/143 (14%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--------- 95
IG+ G G P + + V+D+ N+R+ V FD+ N +
Sbjct: 249 IGNTGISNGQLLGPSSLYADNGGRLYVSDTGNNRIVV----FDVNGNYLDSFGKMGENEG 304
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GI V +N I VAD N RVQ F +G ++ K P ++ ++
Sbjct: 305 EFFSPAGIVVD-NNYIYVADMGNKRVQKFDLNGNYISTI-----KHDLFNEPRGLSFASD 358
Query: 156 NRVIVSDSNNHRVQIFDVNGRVF 178
+ ++D + RV +D+N +F
Sbjct: 359 GNLFIADGS--RVYYYDINNDIF 379
>gi|300871685|ref|YP_003786558.1| hypothetical protein BP951000_2080 [Brachyspira pilosicoli 95/1000]
gi|300689386|gb|ADK32057.1| tetratricopeptide repeat family protein [Brachyspira pilosicoli
95/1000]
Length = 657
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 110/245 (44%), Gaps = 34/245 (13%)
Query: 87 DLKTNCVFLA-FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG---------- 135
+ TN FL P I + D ++ V D S+ ++ F +G + K
Sbjct: 91 NFSTNANFLKNINQPIQIEMAEDGTLYVLDYSDSSLKQFDVNGNLIRKISNGKRLEEQQN 150
Query: 136 SMGNKAGQ----------LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFV 185
S KA Q LE+P + N + ++ N R +IF + ++G ++
Sbjct: 151 SWWRKAIQFVTRVYPYEKLENPRGFTIDNDGYIYIA--NTKRDKIFK-----YDNNGNYI 203
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL 245
G+ G GQL P + N R+ VSD+ N+R+ +FDVNG + SFG G EG+
Sbjct: 204 TNIGNTGISNGQLLGPSSLYADNGGRLYVSDTGNNRIVVFDVNGNYLDSFGKMGENEGEF 263
Query: 246 KFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
P G+ VD+ YI V D GN R+Q F +G ++ F G++ S+GN
Sbjct: 264 FSPAGIVVDN-NYIYVADMGNKRVQKFDLNGNYISTIKH-----DLFNEPRGLSFASDGN 317
Query: 306 ILVCD 310
+ + D
Sbjct: 318 LFIAD 322
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 14/207 (6%)
Query: 126 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ--SDGT 183
S+ ++ F + N + P I ++ + V D ++ ++ FDVNG + + S+G
Sbjct: 84 SNFIYLKNFSTNANFLKNINQPIQIEMAEDGTLYVLDYSDSSLKQFDVNGNLIRKISNGK 143
Query: 184 -FVGKFGSMGNKAGQ----------LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
+ S KA Q LE+P + N + ++++ ++ +D NG I
Sbjct: 144 RLEEQQNSWWRKAIQFVTRVYPYEKLENPRGFTIDNDGYIYIANTKRDKIFKYDNNGNYI 203
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
T+ G+ G GQL P + D+ G + V D+GNNRI +F +G +L +FG G +GEF
Sbjct: 204 TNIGNTGISNGQLLGPSSLYADNGGRLYVSDTGNNRIVVFDVNGNYLDSFGKMGENEGEF 263
Query: 293 KGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ V+ N I V D N R+Q F
Sbjct: 264 FSPAGI-VVDNNYIYVADMGNKRVQKF 289
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----AFTWPR 101
G G G F P GI V +N I VAD N RVQ FDL N + F PR
Sbjct: 254 GKMGENEGEFFSPAGIVVD-NNYIYVADMGNKRVQ----KFDLNGNYISTIKHDLFNEPR 308
Query: 102 GIAVGPDNSIVVADSS 117
G++ D ++ +AD S
Sbjct: 309 GLSFASDGNLFIADGS 324
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 21/143 (14%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--------- 95
IG+ G G P + + V+D+ N+R+ V FD+ N +
Sbjct: 206 IGNTGISNGQLLGPSSLYADNGGRLYVSDTGNNRIVV----FDVNGNYLDSFGKMGENEG 261
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GI V +N I VAD N RVQ F +G ++ K P ++ ++
Sbjct: 262 EFFSPAGIVVD-NNYIYVADMGNKRVQKFDLNGNYISTI-----KHDLFNEPRGLSFASD 315
Query: 156 NRVIVSDSNNHRVQIFDVNGRVF 178
+ ++D + RV +D+N +F
Sbjct: 316 GNLFIADGS--RVYYYDINNDIF 336
>gi|260826081|ref|XP_002607994.1| hypothetical protein BRAFLDRAFT_213589 [Branchiostoma floridae]
gi|229293344|gb|EEN64004.1| hypothetical protein BRAFLDRAFT_213589 [Branchiostoma floridae]
Length = 745
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 106/219 (48%), Gaps = 15/219 (6%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+AV N I+V+D N+++ +F G + GS G+ GQL P + + + +IV+D
Sbjct: 496 VAVNSRNQIIVSDWQNNKMTMFDPSGRHLFTCGSFGSGPGQLHGPQCVITDSEDDIIVAD 555
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
NHRV +F D TF+ + K E +AV +IV+ H+V
Sbjct: 556 FWNHRVSLF-------SRDCTFIRHL--LLTKTEHSETTEGVAVDRLGHIIVT--IGHQV 604
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRG--VAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
+G V+ G G ++GQ F VAV+ + I V D NN++ +F P G+ L
Sbjct: 605 FKLSPSGDVMMRIG--GKDQGQQYFGSSLRVAVNSRNQIIVSDWDNNKMMMFYPSGRRLF 662
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G +GSG G+ + V S +I+V D NHR+ +F
Sbjct: 663 TCGSYGSGPGQLNYPDCVITDSEDDIIVADYNNHRVSLF 701
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+AV + IV D +N RVQ F+GK GS + P +A ++V+
Sbjct: 366 LAVTAEGDIVATDLNNSRVQ-------FLGKDGSFKQRVDLTFKPWSVAALTNGELLVT- 417
Query: 163 SNNHRVQIFDVNGR---VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
+ HR+ + D GR V Q G A E +AV R+IV+
Sbjct: 418 GDGHRIHVLDKQGRESRVIQVTGA-----------AETSETTDGVAVDGLGRIIVT--IG 464
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRG--VAVDDQGYISVGDSGNNRIQIFTPDGQ 277
H+V +G V+ G G ++GQ F VAV+ + I V D NN++ +F P G+
Sbjct: 465 HQVFKLSPSGDVMMRIG--GKDQGQQYFGSSLRVAVNSRNQIIVSDWQNNKMTMFDPSGR 522
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L G +GSG G+ G + V S +I+V D NHR+ +F
Sbjct: 523 HLFTCGSFGSGPGQLHGPQCVITDSEDDIIVADFWNHRVSLF 564
>gi|340386064|ref|XP_003391528.1| PREDICTED: tripartite motif-containing protein 2-like, partial
[Amphimedon queenslandica]
Length = 533
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 87/171 (50%), Gaps = 16/171 (9%)
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
+AV V S+ N VQ VF DGT V + GS GN GQ + P + +
Sbjct: 294 VAVHTNGEVFASNCGNGFVQ-------VFGEDGTAVRRIGSKGNGNGQFDCPWGLLLVG- 345
Query: 210 NRVIVSDSNNHRVQIFD-VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
+R+ VSD N H VQ F G+ I FGSEG+ GQ P G++ D +G I V + GN R
Sbjct: 346 DRLYVSDDNLHCVQYFSATTGQYIGQFGSEGNGNGQFSRPFGMSTDGKGNILVAEYGNRR 405
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+Q+F DG F++A C GS VAV + G I V + H +QVF
Sbjct: 406 VQVFKEDGTFVQAIHCDGSA-------TDVAVDNEGKIHVTIQSQHHVQVF 449
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 32/227 (14%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQ-SDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P G+ + D + V+D + H VQ F + G ++G+FGS GN GQ P ++
Sbjct: 335 FDCPWGLLLVGDR-LYVSDDNLHCVQYFSATTGQYIGQFGSEGNGNGQFSRPFGMSTDGK 393
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
++V++ N RVQ VF+ DGTFV G+ +AV N ++ V+
Sbjct: 394 GNILVAEYGNRRVQ-------VFKEDGTFVQAIHCDGSATD-------VAVDNEGKIHVT 439
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
+ H VQ+F +G+ T + G P +A+DD+GYI V S N + + +PD
Sbjct: 440 IQSQHHVQVFSPDGK--THCDTYNHPSGNFNIPSSIAIDDEGYIFVL-SSNGYLHVLSPD 496
Query: 276 GQFLRAFGCWGSGDGEFKGLE---GVAVMSNGNILVCDRENHRIQVF 319
+ ++ GL GV + NG I V D N + +
Sbjct: 497 KKQVKLIS----------GLSFPWGVTLDKNGYIYVADYSNKHVAKY 533
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 39/239 (16%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF--------- 94
+IGS+G+ G F P G+ + D + V+D + H C +F T
Sbjct: 324 RIGSKGNGNGQFDCPWGLLLVGDR-LYVSDDNLH----CVQYFSATTGQYIGQFGSEGNG 378
Query: 95 -LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F+ P G++ +I+VA+ N RVQVF+ DGTFV G+ +AV
Sbjct: 379 NGQFSRPFGMSTDGKGNILVAEYGNRRVQVFKEDGTFVQAIHCDGSATD-------VAVD 431
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
N ++ V+ + H VQ+F +G+ + + +G P IA+ + +
Sbjct: 432 NEGKIHVTIQSQHHVQVFSPDGKTH---------CDTYNHPSGNFNIPSSIAIDDEGYIF 482
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V SN + + + + + + L FP GV +D GYI V D N + +
Sbjct: 483 VLSSNGY-LHVLSPDKKQVKLISG-------LSFPWGVTLDKNGYIYVADYSNKHVAKY 533
>gi|260785670|ref|XP_002587883.1| hypothetical protein BRAFLDRAFT_87270 [Branchiostoma floridae]
gi|229273038|gb|EEN43894.1| hypothetical protein BRAFLDRAFT_87270 [Branchiostoma floridae]
Length = 624
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 117/273 (42%), Gaps = 63/273 (23%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV---- 152
F P G+ V + I+VAD N R+QVF GTFV +F ++ + G+ PH +A+
Sbjct: 362 FKLPLGVTVSDEGEILVADFGNQRIQVFTLQGTFVHQFPTVMS-GGEKMKPHDVAMDGEG 420
Query: 153 -------------------------------------SNTNRVIVSDSNNHRVQIFDVNG 175
S +R + D+ + + I G
Sbjct: 421 NLWVVGGDLWWMETDSADFAVQYNKQGRVLGNFDLQKSAWDRGVAVDTRRNHILITQTTG 480
Query: 176 R---------VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
VF+ DGT VG ++G + G ++ P I V ++VSD NH V ++
Sbjct: 481 DWPNKHGEVLVFRPDGTLVG---TVGQQQG-MKCPQCITVDEEGNILVSDFGNHCVYVYK 536
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+G+ + FG GSE GQLK PRG+ D G I V D N R+++F G+FL+
Sbjct: 537 EDGQFLFQFGGLGSE-GQLKGPRGICTDRAGNIIVADMENGRVEMFDKTGKFLKHIATGI 595
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
S V + G ++V D N+ I VF
Sbjct: 596 SSPC------AVTMAPQGQLVVTDM-NNTISVF 621
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+FG EGS EGQ K P GV V D+G I V D GN RIQ+FT G F+ F SG GE
Sbjct: 351 TFGGEGSGEGQFKLPLGVTVSDEGEILVADFGNQRIQVFTLQGTFVHQFPTVMSG-GEKM 409
Query: 294 GLEGVAVMSNGNILV 308
VA+ GN+ V
Sbjct: 410 KPHDVAMDGEGNLWV 424
>gi|434381753|ref|YP_006703536.1| tetratricopeptide repeat-containing protein [Brachyspira pilosicoli
WesB]
gi|404430402|emb|CCG56448.1| tetratricopeptide repeat-containing protein [Brachyspira pilosicoli
WesB]
Length = 700
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 110/245 (44%), Gaps = 34/245 (13%)
Query: 87 DLKTNCVFLA-FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG---------- 135
+ TN FL P I + D ++ V D S+ ++ F +G + K
Sbjct: 134 NFSTNANFLKNINQPIQIEMAEDGTLYVLDYSDSSLKQFDVNGNLIRKISNGKRLEQQQN 193
Query: 136 SMGNKAGQ----------LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFV 185
S KA Q LE+P + N + ++ N R +IF + ++G ++
Sbjct: 194 SWWRKAIQFVTRVYPYEKLENPRGFTIDNDGYIYIA--NTKRDKIFK-----YDNNGNYI 246
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL 245
G+ G GQL P + N R+ VSD+ N+R+ +FDVNG + SFG G EG+
Sbjct: 247 TNIGNTGISNGQLLGPSSLYADNGGRLYVSDTGNNRIVVFDVNGNYLDSFGKMGENEGEF 306
Query: 246 KFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
P G+ VD+ YI V D GN R+Q F +G ++ F G++ S+GN
Sbjct: 307 FSPAGIVVDN-NYIYVADMGNKRVQKFDLNGNYISTIKH-----DLFNEPRGLSFASDGN 360
Query: 306 ILVCD 310
+ + D
Sbjct: 361 LFIAD 365
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 126 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG---------- 175
S+ ++ F + N + P I ++ + V D ++ ++ FDVNG
Sbjct: 127 SNFIYLKNFSTNANFLKNINQPIQIEMAEDGTLYVLDYSDSSLKQFDVNGNLIRKISNGK 186
Query: 176 RVFQSDGTFVGK---FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
R+ Q ++ K F + +LE+P + N + ++++ ++ +D NG I
Sbjct: 187 RLEQQQNSWWRKAIQFVTRVYPYEKLENPRGFTIDNDGYIYIANTKRDKIFKYDNNGNYI 246
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
T+ G+ G GQL P + D+ G + V D+GNNRI +F +G +L +FG G +GEF
Sbjct: 247 TNIGNTGISNGQLLGPSSLYADNGGRLYVSDTGNNRIVVFDVNGNYLDSFGKMGENEGEF 306
Query: 293 KGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ V+ N I V D N R+Q F
Sbjct: 307 FSPAGI-VVDNNYIYVADMGNKRVQKF 332
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----AFTWPR 101
G G G F P GI V +N I VAD N RVQ FDL N + F PR
Sbjct: 297 GKMGENEGEFFSPAGIVVD-NNYIYVADMGNKRVQ----KFDLNGNYISTIKHDLFNEPR 351
Query: 102 GIAVGPDNSIVVADSS 117
G++ D ++ +AD S
Sbjct: 352 GLSFASDGNLFIADGS 367
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 21/143 (14%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--------- 95
IG+ G G P + + V+D+ N+R+ V FD+ N +
Sbjct: 249 IGNTGISNGQLLGPSSLYADNGGRLYVSDTGNNRIVV----FDVNGNYLDSFGKMGENEG 304
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GI V +N I VAD N RVQ F +G ++ K P ++ ++
Sbjct: 305 EFFSPAGIVVD-NNYIYVADMGNKRVQKFDLNGNYISTI-----KHDLFNEPRGLSFASD 358
Query: 156 NRVIVSDSNNHRVQIFDVNGRVF 178
+ ++D + RV +D+N +F
Sbjct: 359 GNLFIADGS--RVYYYDINNDIF 379
>gi|296132605|ref|YP_003639852.1| NHL repeat containing protein [Thermincola potens JR]
gi|296031183|gb|ADG81951.1| NHL repeat containing protein [Thermincola potens JR]
Length = 329
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 154/333 (46%), Gaps = 54/333 (16%)
Query: 13 CFLLQTLLVSGIGQVGTTPRS--QYLQKRRLQFKIGSRGSE-PGCFTWPRGIAVGPDNSI 69
C + L+ + Q ++P Q L + +F IG GS P + P + V + I
Sbjct: 22 CGFITWLIFNKSEQTFSSPSGFGQRLPEVAYKFTIGGDGSTGPYKLSEPMAVDVADNGDI 81
Query: 70 VVADSSNHRVQVCFPHFDLKTNCVF---LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
VAD+ N+++++ K + F F P + +GP+ I VADS N R+Q+F
Sbjct: 82 YVADTLNNQIKIFDKEGKFKKS--FGGRELFYLPSDLVIGPE-GIFVADSKNSRIQLFSL 138
Query: 127 DGTFVGKFGS--MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTF 184
+G F F S +G + G + P + S+ + V+D RV IFD G+V
Sbjct: 139 EGDFRKTFVSPEIGRQIGAM-IPVALYCSSDGTLYVTDVFYQRVIIFDPKGQV------- 190
Query: 185 VGKFGSMGNKAGQLEHPH-----------YIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT 233
V FG G++ G L +P+ Y+A SN N R+Q+FD+NG+
Sbjct: 191 VKYFGMPGSREGNLLYPNGITVNEKKKLIYVADSN----------NGRIQVFDLNGQ--- 237
Query: 234 SFGSEGSEEGQLKF---PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL---RAFGCWGS 287
F E+G++ F PRG+ D +V ++ ++R+ F DG + FG G
Sbjct: 238 -FKGILKEDGRVLFLNMPRGIVTFDDIVFTV-ETFSHRVSAFRTDGANVLEKAVFGSRGL 295
Query: 288 GDGEFKGLEGVAVMSNGNIL-VCDRENHRIQVF 319
GD + +A+ GN+L V DR N R+ V+
Sbjct: 296 GDDQMNFPNDIAL--KGNVLCVADRANDRVLVY 326
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 77/181 (42%), Gaps = 21/181 (11%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---------FTWPRGIAVGPD 108
P + D ++ V D RV + FD K V +P GI V
Sbjct: 160 PVALYCSSDGTLYVTDVFYQRVII----FDPKGQVVKYFGMPGSREGNLLYPNGITVNEK 215
Query: 109 NSIV-VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 167
++ VADS+N R+QVF +G F G G + L P I V+ + V ++ +HR
Sbjct: 216 KKLIYVADSNNGRIQVFDLNGQFKGILKEDG-RVLFLNMPRGI-VTFDDIVFTVETFSHR 273
Query: 168 VQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 227
V F +G FGS G Q+ P+ IA+ N + V+D N RV ++++
Sbjct: 274 VSAFRTDGANVLEKAV----FGSRGLGDDQMNFPNDIALKG-NVLCVADRANDRVLVYEL 328
Query: 228 N 228
Sbjct: 329 K 329
>gi|291222486|ref|XP_002731247.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 727
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 141/310 (45%), Gaps = 32/310 (10%)
Query: 21 VSGIGQVGTTPRSQYLQKRRLQFKIGSRGSE----PGCFTWPRGIAVGPDNSIVVADSSN 76
+ G Q+ T +Q+L + RG G P G+ + V AD N
Sbjct: 437 MEGKQQIAMTIGNQHLPGSPFHIPVYIRGLVQTVGKGQLNSPFGLTINKHGDFVTADREN 496
Query: 77 HRVQVCFPHFDLKTNCVFL-----AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV 131
+RV + K + F FT PR + + +N + D +N +V V +G +
Sbjct: 497 NRVVIHDIDGKFKQSFTFTGQFAKPFT-PRDVTISDNNEYFMTDENNKQVVVSDENGKLI 555
Query: 132 GKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGS 190
KFGS ++++P IA+ S T V VS+ + + R + DG ++ FG
Sbjct: 556 RKFGS-----SEIDNPRGIAINSVTKNVYVSEFSTDCI-------RKYTQDGVYIKSFGR 603
Query: 191 MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRG 250
G++ G+ P +A+++ V V D NN +Q+F+ + + + F S G + + R
Sbjct: 604 NGSRRGEFNGPCMLAMNSNGMVYVPDYNNDCIQVFNSDDQFLFEFSSTG--DSTMSCSRA 661
Query: 251 VAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE-FKGLEGVAVMSNGNILVC 309
VAVD+ Y+ VG +++ +GQF+ C D + + GVAV ++G I V
Sbjct: 662 VAVDENDYVYVG--SEHKVTKHDSNGQFI----CRIDSDKDGLRHPLGVAVCNDGRIAVV 715
Query: 310 DRENHRIQVF 319
D N+ I+VF
Sbjct: 716 DFSNNCIKVF 725
>gi|260832798|ref|XP_002611344.1| hypothetical protein BRAFLDRAFT_210869 [Branchiostoma floridae]
gi|229296715|gb|EEN67354.1| hypothetical protein BRAFLDRAFT_210869 [Branchiostoma floridae]
Length = 214
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 11/211 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P + +++I+VAD N RV +F DGTF+ + E +AV R+I
Sbjct: 4 PETVITDSEDNIIVADFGNDRVSMFSRDGTFIRHVLTRKEHGLYHETTLGVAVDGLGRII 63
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+ ++V + G V KFG G QL + V+++N++IVSD +N
Sbjct: 64 VTIG--YQVLVLSPGGDVML-------KFGYKGQGQQQLSSDLRVTVNSSNQIIVSDYDN 114
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
H V++FD GR + + GS GS GQL P V D + I V D N R+ +F+ +G F+
Sbjct: 115 HNVKVFDPAGRHLFTCGSLGSGPGQLNKPECVITDSEDKIIVADCNNWRVSVFSRNGTFI 174
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
R + G G+A+ +G+++V +
Sbjct: 175 RHV--LTREEHGLCGPLGLALTHDGHLVVSE 203
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 9/176 (5%)
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
LE+P + + + +IV+D N RV +F DGTF+ + E
Sbjct: 1 LENPETVITDSEDNIIVADFGNDRVSMF-------SRDGTFIRHVLTRKEHGLYHETTLG 53
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
+AV R+IV+ ++V + G V+ FG +G + QL V V+ I V D
Sbjct: 54 VAVDGLGRIIVTIG--YQVLVLSPGGDVMLKFGYKGQGQQQLSSDLRVTVNSSNQIIVSD 111
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
N+ +++F P G+ L G GSG G+ E V S I+V D N R+ VF
Sbjct: 112 YDNHNVKVFDPAGRHLFTCGSLGSGPGQLNKPECVITDSEDKIIVADCNNWRVSVF 167
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 14/154 (9%)
Query: 21 VSGIGQVGTTPRSQYLQKR---RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNH 77
V G+G++ T Q L + K G +G + + V N I+V+D NH
Sbjct: 56 VDGLGRIIVTIGYQVLVLSPGGDVMLKFGYKGQGQQQLSSDLRVTVNSSNQIIVSDYDNH 115
Query: 78 RVQVCFPHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV- 131
V+V P C L P + ++ I+VAD +N RV VF +GTF+
Sbjct: 116 NVKVFDPAGRHLFTCGSLGSGPGQLNKPECVITDSEDKIIVADCNNWRVSVFSRNGTFIR 175
Query: 132 -----GKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
+ G G L H ++ VS I+
Sbjct: 176 HVLTREEHGLCGPLGLALTHDGHLVVSECTHSII 209
>gi|260835270|ref|XP_002612632.1| hypothetical protein BRAFLDRAFT_78740 [Branchiostoma floridae]
gi|229298010|gb|EEN68641.1| hypothetical protein BRAFLDRAFT_78740 [Branchiostoma floridae]
Length = 639
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 94/186 (50%), Gaps = 28/186 (15%)
Query: 99 WPRGIAVGPD-NSIVVADSSNH---------RVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
W RGIAV N I+V ++ H V VF+ DGT V ++G G + +P
Sbjct: 465 WRRGIAVDTKRNHILVTQTTGHIDDEDNRRGEVLVFRPDGTLVR---TVGQHQGMV-NPW 520
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 208
+IAV N +++SDS NH + +FD DG F+ +FG G GQL+ P I
Sbjct: 521 HIAVDRGN-ILLSDSYNHFIYVFD-------EDGRFLLQFGGEGGSNGQLKGPLGICTDT 572
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
+ V D +N RV++FD+ GR + ++ +++P VA+ QG + V DSG N
Sbjct: 573 AGNIFVVDRDNSRVEMFDIAGRFLKHITTD------IQYPLAVAMAPQGQLVVTDSGENN 626
Query: 269 IQIFTP 274
I I P
Sbjct: 627 IHIIPP 632
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 135/287 (47%), Gaps = 54/287 (18%)
Query: 60 GIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV--FLAFTW------PRGIAVG----- 106
G+AV + + VAD+ N ++QV F L+ + F A P+ +A+
Sbjct: 371 GVAVSKEGEVFVADTGNQKIQV----FTLQGMLLRQFPAAVSDELNIDPQDVALDGKGNL 426
Query: 107 -----PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY---IAV-SNTNR 157
P + + D S + VQ + G + KF L H+ IAV + N
Sbjct: 427 WVVGYPFCAYLCRDRSEYVVQ-YNKQGRVLRKFA--------LRRAHWRRGIAVDTKRNH 477
Query: 158 VIVSDSNNHRVQIFDVNGR-----VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
++V+ + H I D + R VF+ DGT V ++G G + +P +IAV N +
Sbjct: 478 ILVTQTTGH---IDDEDNRRGEVLVFRPDGTLVR---TVGQHQGMV-NPWHIAVDRGN-I 529
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
++SDS NH + +FD +GR + FG EG GQLK P G+ D G I V D N+R+++F
Sbjct: 530 LLSDSYNHFIYVFDEDGRFLLQFGGEGGSNGQLKGPLGICTDTAGNIFVVDRDNSRVEMF 589
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+FL+ + D ++ VA+ G ++V D + I +
Sbjct: 590 DIAGRFLKHI----TTDIQYP--LAVAMAPQGQLVVTDSGENNIHII 630
>gi|219850318|ref|YP_002464751.1| NHL repeat-containing protein [Chloroflexus aggregans DSM 9485]
gi|219544577|gb|ACL26315.1| NHL repeat protein [Chloroflexus aggregans DSM 9485]
Length = 1140
Score = 91.3 bits (225), Expect = 5e-16, Method: Composition-based stats.
Identities = 57/185 (30%), Positives = 85/185 (45%), Gaps = 13/185 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
GIA +I VAD+ NHR++VF +DGT + G+ GN Q P +A + V+
Sbjct: 848 GIAFDRQGNIYVADTLNHRIEVFAADGTPIRTIGTQGNALDQFYEPRGLAFDAQGNLYVA 907
Query: 162 DSNNHRVQIFDVNGRVFQS-----------DGTFVGKFGSMGNKAGQLEH--PHYIAVSN 208
D+ N R+ + + R S + + N A L P +AV
Sbjct: 908 DTWNARIVKYSPDLRPMTSWGGGDLDLGDGRRATITEGDPARNAAAPLGFFGPRGVAVDA 967
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
V ++D+ N R+ + D NG + FG GS GQ P +A D G + V D+ N R
Sbjct: 968 AGNVYIADTGNKRIVVTDSNGTFLYQFGGAGSAPGQFNEPTSLAFDAAGNLYVADTWNGR 1027
Query: 269 IQIFT 273
+Q+FT
Sbjct: 1028 VQVFT 1032
Score = 90.5 bits (223), Expect = 9e-16, Method: Composition-based stats.
Identities = 62/190 (32%), Positives = 91/190 (47%), Gaps = 27/190 (14%)
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
IA + V+D+ NHR++ VF +DGT + G+ GN Q P +A
Sbjct: 849 IAFDRQGNIYVADTLNHRIE-------VFAADGTPIRTIGTQGNALDQFYEPRGLAFDAQ 901
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFG--------------SEG----SEEGQLKF--PR 249
+ V+D+ N R+ + + R +TS+G +EG + L F PR
Sbjct: 902 GNLYVADTWNARIVKYSPDLRPMTSWGGGDLDLGDGRRATITEGDPARNAAAPLGFFGPR 961
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
GVAVD G + + D+GN RI + +G FL FG GS G+F +A + GN+ V
Sbjct: 962 GVAVDAAGNVYIADTGNKRIVVTDSNGTFLYQFGGAGSAPGQFNEPTSLAFDAAGNLYVA 1021
Query: 310 DRENHRIQVF 319
D N R+QVF
Sbjct: 1022 DTWNGRVQVF 1031
Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 78/291 (26%), Positives = 122/291 (41%), Gaps = 39/291 (13%)
Query: 60 GIAVGPDNSIVVADSSNHRVQVC----FPHFDLKTNCVFL-AFTWPRGIAVGPDNSIVVA 114
GIA +I VAD+ NHR++V P + T L F PRG+A ++ VA
Sbjct: 848 GIAFDRQGNIYVADTLNHRIEVFAADGTPIRTIGTQGNALDQFYEPRGLAFDAQGNLYVA 907
Query: 115 DSSNHRVQVFQSD------------------GTFVGKFGSMGNKAGQLEH--PHYIAVSN 154
D+ N R+ + D + + N A L P +AV
Sbjct: 908 DTWNARIVKYSPDLRPMTSWGGGDLDLGDGRRATITEGDPARNAAAPLGFFGPRGVAVDA 967
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
V ++D+ N R+ + D S+GTF+ +FG G+ GQ P +A + V
Sbjct: 968 AGNVYIADTGNKRIVVTD-------SNGTFLYQFGGAGSAPGQFNEPTSLAFDAAGNLYV 1020
Query: 215 SDSNNHRVQIF--DVNGRV----ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
+D+ N RVQ+F +GR+ +T++ G + P +AV G + V
Sbjct: 1021 ADTWNGRVQVFTRTADGRIDPTPLTTWPVAGWQPNTYDDPM-LAVSPDGMVYVAVPARQY 1079
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
I + + G+ L + +G G+AV +NG+I V DR R F
Sbjct: 1080 ILVASTGGEALLQWTGFGRDGVPITSPSGLAVATNGSIWVVDRLGGRAARF 1130
Score = 46.2 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 12/140 (8%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRG 102
++ G GS PG F P +A ++ VAD+ N RVQV D + + L TWP
Sbjct: 992 YQFGGAGSAPGQFNEPTSLAFDAAGNLYVADTWNGRVQVFTRTADGRIDPTPLT-TWPVA 1050
Query: 103 -----------IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
+AV PD + VA + + V + G + ++ G + P +A
Sbjct: 1051 GWQPNTYDDPMLAVSPDGMVYVAVPARQYILVASTGGEALLQWTGFGRDGVPITSPSGLA 1110
Query: 152 VSNTNRVIVSDSNNHRVQIF 171
V+ + V D R F
Sbjct: 1111 VATNGSIWVVDRLGGRAARF 1130
>gi|350411621|ref|XP_003489405.1| PREDICTED: hypothetical protein LOC100749764 [Bombus impatiens]
Length = 943
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 111/259 (42%), Gaps = 44/259 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNT 155
F+ P G + D I+VAD++NHR+Q+F G F +FG G + GQL +P IAV N+
Sbjct: 687 FSSPHGFCLSADEDIIVADTNNHRIQIFDKTGIFKFQFGVPGKEEGQLWYPRKIAVMKNS 746
Query: 156 NRVIVSDSNNH--RVQIFD----------------VNGRVFQSDGTFV------------ 185
+ +V D N R+QIF V G S+G +
Sbjct: 747 GKFVVCDRGNERSRMQIFTKSGHFIKKIAIRYIDIVAGLAVTSEGHILAVDSVSPTVFVI 806
Query: 186 ---GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
G+ + + + + P IA+S V D H V +F+ G + G +
Sbjct: 807 SDTGELLNWFDCSEYMREPSDIAISG-KEYFVCDFKGHCVVVFNEEGNFLRRIGCDNV-- 863
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNR--IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
FP G+ + D G I +GDS NR + +F+ DG + F C GL+ +
Sbjct: 864 --TNFPNGIDISDAGDILIGDSHGNRFHVAVFSRDGSLISEFECPYVKVSRCCGLK---I 918
Query: 301 MSNGNILVCDRENHRIQVF 319
S G I+ + NH + V
Sbjct: 919 TSEGYIVTLAKNNHHVLVL 937
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 69/127 (54%), Gaps = 8/127 (6%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
KFG +G GQ PH +S +IV+D+NNHR+QIFD G FG G EEGQL
Sbjct: 676 KFGQLGPSKGQFSSPHGFCLSADEDIIVADTNNHRIQIFDKTGIFKFQFGVPGKEEGQLW 735
Query: 247 FPRGVAV-DDQGYISVGDSGN--NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
+PR +AV + G V D GN +R+QIFT G F++ + G+AV S
Sbjct: 736 YPRKIAVMKNSGKFVVCDRGNERSRMQIFTKSGHFIKKIAIR-----YIDIVAGLAVTSE 790
Query: 304 GNILVCD 310
G+IL D
Sbjct: 791 GHILAVD 797
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 88/190 (46%), Gaps = 20/190 (10%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
KFG +G GQ PH +S +IV+D+NNHR+QIFD G F +FG G
Sbjct: 676 KFGQLGPSKGQFSSPHGFCLSADEDIIVADTNNHRIQIFD-------KTGIFKFQFGVPG 728
Query: 193 NKAGQLEHPHYIAV-SNTNRVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
+ GQL +P IAV N+ + +V D N R+QIF +G I +
Sbjct: 729 KEEGQLWYPRKIAVMKNSGKFVVCDRGNERSRMQIFTKSGHFIKKIAIR-----YIDIVA 783
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
G+AV +G+I DS + + + + G+ L F C E+ +S VC
Sbjct: 784 GLAVTSEGHILAVDSVSPTVFVISDTGELLNWFDC-----SEYMREPSDIAISGKEYFVC 838
Query: 310 DRENHRIQVF 319
D + H + VF
Sbjct: 839 DFKGHCVVVF 848
>gi|433460424|ref|ZP_20418054.1| peptidylamidoglycolate lyase [Halobacillus sp. BAB-2008]
gi|432191506|gb|ELK48454.1| peptidylamidoglycolate lyase [Halobacillus sp. BAB-2008]
Length = 356
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 106/254 (41%), Gaps = 43/254 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS-------------------- 136
F P GI + +++ + D ++V F S G + FGS
Sbjct: 111 FQSPHGIEIDSKDNVWITDILQNKVFQFNSSGEMIRTFGSDYPFYMESALRIRNVLPGFP 170
Query: 137 MGNKAGQLEHPHYIAVSNTNRVIVSDS-NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA 195
G A P + V +VSD N+R+ FD NG++ + G K+
Sbjct: 171 TGMDAYTFARPTDVTVMEDGSFVVSDGYRNNRIVKFDKNGKL-------EWERNERGTKS 223
Query: 196 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD 255
G+ PH I R+ V+D +N RVQ+F +G I ++ + +L P G+
Sbjct: 224 GEFHLPHGITHDENGRIYVADRSNARVQVFAKDGNYIETWTQD-----ELGRPFGIDAGS 278
Query: 256 QGYISVGDSGN----------NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
G I + D GN N++ I G L FG WGSG G K + V+ NG+
Sbjct: 279 DGKIYIADGGNELYENGGKGSNQVVIMNQQGVILERFGEWGSGQGAMKIPHDITVLPNGD 338
Query: 306 ILVCDRENHRIQVF 319
ILV D +N R+ F
Sbjct: 339 ILVADLKNSRLVTF 352
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 90/212 (42%), Gaps = 25/212 (11%)
Query: 74 SSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADS-SNHRVQVFQSDGTFVG 132
S R++ P F T F P + V D S VV+D N+R+ F +G
Sbjct: 157 ESALRIRNVLPGF--PTGMDAYTFARPTDVTVMEDGSFVVSDGYRNNRIVKFDKNGKLEW 214
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
+ G K+G+ PH I R+ V+D +N RVQ VF DG ++ +
Sbjct: 215 ERNERGTKSGEFHLPHGITHDENGRIYVADRSNARVQ-------VFAKDGNYIETW---- 263
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNH----------RVQIFDVNGRVITSFGSEGSEE 242
+L P I + ++ ++D N +V I + G ++ FG GS +
Sbjct: 264 -TQDELGRPFGIDAGSDGKIYIADGGNELYENGGKGSNQVVIMNQQGVILERFGEWGSGQ 322
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
G +K P + V G I V D N+R+ FTP
Sbjct: 323 GAMKIPHDITVLPNGDILVADLKNSRLVTFTP 354
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 62/142 (43%), Gaps = 10/142 (7%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+L+++ RG++ G F P GI + I VAD SN RVQV +
Sbjct: 211 KLEWERNERGTKSGEFHLPHGITHDENGRIYVADRSNARVQVFAKDGNYIETWTQDELGR 270
Query: 100 PRGIAVGPDNSIVVADSSNH----------RVQVFQSDGTFVGKFGSMGNKAGQLEHPHY 149
P GI G D I +AD N +V + G + +FG G+ G ++ PH
Sbjct: 271 PFGIDAGSDGKIYIADGGNELYENGGKGSNQVVIMNQQGVILERFGEWGSGQGAMKIPHD 330
Query: 150 IAVSNTNRVIVSDSNNHRVQIF 171
I V ++V+D N R+ F
Sbjct: 331 ITVLPNGDILVADLKNSRLVTF 352
>gi|340729501|ref|XP_003403039.1| PREDICTED: hypothetical protein LOC100643228 [Bombus terrestris]
Length = 943
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 111/259 (42%), Gaps = 44/259 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNT 155
F+ P G + D I+VAD++NHR+Q+F G F +FG G + GQL +P IAV N+
Sbjct: 687 FSSPHGFCLSADEDIIVADTNNHRIQIFDKTGIFKFQFGVPGKEEGQLWYPRKIAVMKNS 746
Query: 156 NRVIVSDSNNH--RVQIFD----------------VNGRVFQSDGTFV------------ 185
+ +V D N R+QIF V G S+G +
Sbjct: 747 GKFVVCDRGNERSRMQIFTKSGHFIKKIAIRYIDIVAGLAVTSEGHILAVDSVSPTVFVI 806
Query: 186 ---GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
G+ + + + + P IA+S V D H V +F+ G + G +
Sbjct: 807 SDTGELLNWFDCSEYMREPSDIAISG-KEYFVCDFKGHCVVVFNEEGNFLRRIGCDNV-- 863
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNR--IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
FP G+ + D G I +GDS NR + +F+ DG + F C GL+ +
Sbjct: 864 --TNFPNGIDISDAGDILIGDSHGNRFHVAVFSRDGSLISEFECPYVKVSRCCGLK---I 918
Query: 301 MSNGNILVCDRENHRIQVF 319
S G I+ + NH + V
Sbjct: 919 TSEGYIVTLAKNNHHVLVL 937
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 69/127 (54%), Gaps = 8/127 (6%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
KFG +G GQ PH +S +IV+D+NNHR+QIFD G FG G EEGQL
Sbjct: 676 KFGQLGPSKGQFSSPHGFCLSADEDIIVADTNNHRIQIFDKTGIFKFQFGVPGKEEGQLW 735
Query: 247 FPRGVAV-DDQGYISVGDSGN--NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
+PR +AV + G V D GN +R+QIFT G F++ + G+AV S
Sbjct: 736 YPRKIAVMKNSGKFVVCDRGNERSRMQIFTKSGHFIKKIAIR-----YIDIVAGLAVTSE 790
Query: 304 GNILVCD 310
G+IL D
Sbjct: 791 GHILAVD 797
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 88/190 (46%), Gaps = 20/190 (10%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
KFG +G GQ PH +S +IV+D+NNHR+QIFD G F +FG G
Sbjct: 676 KFGQLGPSKGQFSSPHGFCLSADEDIIVADTNNHRIQIFD-------KTGIFKFQFGVPG 728
Query: 193 NKAGQLEHPHYIAV-SNTNRVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
+ GQL +P IAV N+ + +V D N R+QIF +G I +
Sbjct: 729 KEEGQLWYPRKIAVMKNSGKFVVCDRGNERSRMQIFTKSGHFIKKIAIR-----YIDIVA 783
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
G+AV +G+I DS + + + + G+ L F C E+ +S VC
Sbjct: 784 GLAVTSEGHILAVDSVSPTVFVISDTGELLNWFDC-----SEYMREPSDIAISGKEYFVC 838
Query: 310 DRENHRIQVF 319
D + H + VF
Sbjct: 839 DFKGHCVVVF 848
>gi|427400920|ref|ZP_18892158.1| hypothetical protein HMPREF9710_01754 [Massilia timonae CCUG 45783]
gi|425720099|gb|EKU83025.1| hypothetical protein HMPREF9710_01754 [Massilia timonae CCUG 45783]
Length = 717
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 128/294 (43%), Gaps = 33/294 (11%)
Query: 55 FTWPRGIAVGPDNSIVVADSSN-HRVQVCFPHFDLKTNC-----------VFLAFTWPRG 102
F+ P G+A+G ++ VAD +R+++ P + T AF P
Sbjct: 74 FSDPYGVAIGARGAVYVADGGEANRIRLIQPDGAVSTLAGGKEGFADGIGAAAAFHTPSA 133
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTF--VGKFGSMG-----NKAGQLEHPHYIAVSNT 155
+A+ + ++ VAD+ NH ++ DGT V GS G +A Q P IAV +
Sbjct: 134 LALDHEGNLYVADTGNHAIRKVAPDGTVTTVAGSGSPGYLDGIGRAAQFNGPVGIAVDDA 193
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA--GQLEHPHYIAVSNTNRVI 213
V V+D+ N R++ +G V G GK G + + P +A +
Sbjct: 194 GIVYVADTYNDRIRRIAPDGMVTTLAGN--GKPGLLDGALLDAGFDTPSALAAGRDGTLY 251
Query: 214 VSDSNNHRVQIFDVNGRVIT-SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V+D+ NH V+ +G V T + EG L+ P G+A+ GY+ + S RI
Sbjct: 252 VADTGNHAVRRIKPDGTVDTLAIPLEGETRPPLRRPAGLALTRDGYLYIAASAGGRILQL 311
Query: 273 TPDGQF---------LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
TP+G+ L G G + G G+AV +G+++V D HR+
Sbjct: 312 TPEGEMRPLQDVDRPLDPNGFGSDGTVQLYGPRGIAVGRDGSLVVADANAHRVH 365
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 16/192 (8%)
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNN-HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE 199
A + P+ +A+ V V+D +R+++ +G V G G +G A
Sbjct: 71 ASRFSDPYGVAIGARGAVYVADGGEANRIRLIQPDGAVSTLAGGKEGFADGIG-AAAAFH 129
Query: 200 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT--SFGSEGSEEG-----QLKFPRGVA 252
P +A+ + + V+D+ NH ++ +G V T GS G +G Q P G+A
Sbjct: 130 TPSALALDHEGNLYVADTGNHAIRKVAPDGTVTTVAGSGSPGYLDGIGRAAQFNGPVGIA 189
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG-------DGEFKGLEGVAVMSNGN 305
VDD G + V D+ N+RI+ PDG G G D F +A +G
Sbjct: 190 VDDAGIVYVADTYNDRIRRIAPDGMVTTLAGNGKPGLLDGALLDAGFDTPSALAAGRDGT 249
Query: 306 ILVCDRENHRIQ 317
+ V D NH ++
Sbjct: 250 LYVADTGNHAVR 261
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 100/252 (39%), Gaps = 40/252 (15%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT-----NCVFL-------AFTWPR 101
F P +A+ + ++ VAD+ NH ++ P + T + +L F P
Sbjct: 127 AFHTPSALALDHEGNLYVADTGNHAIRKVAPDGTVTTVAGSGSPGYLDGIGRAAQFNGPV 186
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDG--TFVGKFGSMGNKAGQL-----EHPHYIAVSN 154
GIAV + VAD+ N R++ DG T + G G G L + P +A
Sbjct: 187 GIAVDDAGIVYVADTYNDRIRRIAPDGMVTTLAGNGKPGLLDGALLDAGFDTPSALAAGR 246
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTF-VGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+ V+D+ NH V R + DGT G L P +A++ +
Sbjct: 247 DGTLYVADTGNHAV-------RRIKPDGTVDTLAIPLEGETRPPLRRPAGLALTRDGYLY 299
Query: 214 VSDSNNHRVQIFDVNGRV-----------ITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
++ S R+ G + FGS+G+ QL PRG+AV G + V
Sbjct: 300 IAASAGGRILQLTPEGEMRPLQDVDRPLDPNGFGSDGTV--QLYGPRGIAVGRDGSLVVA 357
Query: 263 DSGNNRIQIFTP 274
D+ +R+ P
Sbjct: 358 DANAHRVHRLAP 369
>gi|149374372|ref|ZP_01892146.1| hypothetical protein MDG893_10006 [Marinobacter algicola DG893]
gi|149361075|gb|EDM49525.1| hypothetical protein MDG893_10006 [Marinobacter algicola DG893]
Length = 311
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GIAV D + +AD+ N R+QVF G F FG L P + ++ NR+
Sbjct: 56 PTGIAVTAD-EVYIADARNSRIQVFDKQGKFRRAFG-----GDILGRPMNMDIAG-NRLY 108
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D + +F + G ++ T G L P +AV + ++++D+
Sbjct: 109 VPDYFKDVIHVFTLAGEYCEAIKTDDG-----------LTSPGGLAVRDDGTLLIADTYG 157
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
RV +G V+ S+ G G +P +A+ G V D N+RIQ F PDG+F+
Sbjct: 158 QRVVHLAPDGEVLRSWAGTGIGAGDFNYPTDIAIAPDGGFYVADGYNDRIQQFDPDGEFV 217
Query: 280 RAFG------CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
R +G +G G F + VAV G++ D N RIQ F
Sbjct: 218 RKWGGPFAMNIYGPFKGWFTTVTSVAVGLEGSVYAADFYNDRIQKF 263
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 114/278 (41%), Gaps = 58/278 (20%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH-----------------FDL 88
G +GS PG F P GIAV D + +AD+ N R+QV D+
Sbjct: 44 GEKGSGPGQFNDPTGIAVTAD-EVYIADARNSRIQVFDKQGKFRRAFGGDILGRPMNMDI 102
Query: 89 KTNCVFL-------------------------AFTWPRGIAVGPDNSIVVADSSNHRVQV 123
N +++ T P G+AV D ++++AD+ RV
Sbjct: 103 AGNRLYVPDYFKDVIHVFTLAGEYCEAIKTDDGLTSPGGLAVRDDGTLLIADTYGQRVVH 162
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGT 183
DG + + G AG +P IA++ V+D N R+Q FD DG
Sbjct: 163 LAPDGEVLRSWAGTGIGAGDFNYPTDIAIAPDGGFYVADGYNDRIQQFD-------PDGE 215
Query: 184 FVGKFGS------MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS 237
FV K+G G G +AV V +D N R+Q F G +T+FGS
Sbjct: 216 FVRKWGGPFAMNIYGPFKGWFTTVTSVAVGLEGSVYAADFYNDRIQKFTAEGDYLTAFGS 275
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
E + G VAVD++G + + +NR++ + PD
Sbjct: 276 EPANAGHTAM--AVAVDNEGTVWSVNFADNRVEKWQPD 311
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 234 SFGSEGSEEGQLKFPRGVAVD-DQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
++G +GS GQ P G+AV D+ YI+ D+ N+RIQ+F G+F RAFG
Sbjct: 42 AWGEKGSGPGQFNDPTGIAVTADEVYIA--DARNSRIQVFDKQGKFRRAFG 90
>gi|119509375|ref|ZP_01628524.1| hypothetical protein N9414_24108 [Nodularia spumigena CCY9414]
gi|119465989|gb|EAW46877.1| hypothetical protein N9414_24108 [Nodularia spumigena CCY9414]
Length = 391
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 116/263 (44%), Gaps = 32/263 (12%)
Query: 39 RRLQFKIGSRGSEPGCFTWPRGIAV--GPDNSIVVADSSNHRVQVCFPHFDLKTNCV--- 93
R F G PG T P+GI V N V RV V FD + N +
Sbjct: 38 RPATFTDGDYPGVPGVITVPQGIGVQDSTGNIFVSNGRGIDRVDV----FDSEGNYIKGI 93
Query: 94 ------FLAFTWPRGIAVGP-DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH 146
F P + P + V D N R+ VF ++G + + S +G +E
Sbjct: 94 GSTGSGSGEFDEPADLRFNPITGDMHVGDVFNSRINVFDAEGNYKTSYASF---SGPVED 150
Query: 147 -----PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP 201
P + + VSD + +++++ G ++ GS G++ GQ P
Sbjct: 151 RFFFGPGGMDFDAAGNLYVSDFSADIIKVYNPEGEQIRT-------IGSPGSEPGQFLGP 203
Query: 202 HYIAVSNTN-RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
+ +S+T R+ ++D N R+Q+ D NG + FGS GSE GQ P G+ VD+ I
Sbjct: 204 GGLIISDTTGRIYINDQYNGRIQVLDPNGEFLFEFGSTGSEPGQFIEPIGIDVDEYENIY 263
Query: 261 VGDSGNNRIQIFTPDGQFLRAFG 283
V DS N+R+Q+F DG FL FG
Sbjct: 264 VADSQNSRVQVFDKDGNFLTTFG 286
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 110/235 (46%), Gaps = 27/235 (11%)
Query: 98 TWPRGIAV--GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN- 154
T P+GI V N V RV VF S+G ++ GS G+ +G+ + P + +
Sbjct: 55 TVPQGIGVQDSTGNIFVSNGRGIDRVDVFDSEGNYIKGIGSTGSGSGEFDEPADLRFNPI 114
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK------FGSMG---NKAGQLEHPHYIA 205
T + V D N R+ +FD G S +F G FG G + AG L
Sbjct: 115 TGDMHVGDVFNSRINVFDAEGNYKTSYASFSGPVEDRFFFGPGGMDFDAAGNL------- 167
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ-GYISVGDS 264
VSD + +++++ G I + GS GSE GQ P G+ + D G I + D
Sbjct: 168 -------YVSDFSADIIKVYNPEGEQIRTIGSPGSEPGQFLGPGGLIISDTTGRIYINDQ 220
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
N RIQ+ P+G+FL FG GS G+F G+ V NI V D +N R+QVF
Sbjct: 221 YNGRIQVLDPNGEFLFEFGSTGSEPGQFIEPIGIDVDEYENIYVADSQNSRVQVF 275
>gi|296133719|ref|YP_003640966.1| NHL repeat containing protein [Thermincola potens JR]
gi|296032297|gb|ADG83065.1| NHL repeat containing protein [Thermincola potens JR]
Length = 322
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 26/239 (10%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD-----LKTNCVF 94
R + IG RG G F +P G+AV D + V+D N VQ FD L+T V
Sbjct: 100 RYLYSIGERGKGAGEFNYPYGLAVFSDGRLWVSDPENFTVQ----EFDAKGRYLRTIGVA 155
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
P + +G + ++D + HR+ +F + G ++G+ KAG L HP I +
Sbjct: 156 AYGIKPGLMCLGQGGRVYISDLARHRIVIFDARGRYMGEI-----KAG-LTHPQGILADS 209
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ + V D + QI + G+ G+ +G G +A N R++V
Sbjct: 210 SGSLWVVD--EAQCQIKKITGKKVVCSVIVPGRVLPLGMVKG-------LAADNLYRLMV 260
Query: 215 SDSNNHRVQIFDVNGRVITSFG-SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+ +RV ++D GR++ +FG SE EEG L P G+ VD+ G I V + G+ R+ ++
Sbjct: 261 TQPFANRVLVYDGRGRLLFTFGQSEDLEEG-LNLPVGITVDEDGRIYVANRGDGRVAVW 318
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 96 AFTWPRGIAVGPDNSIV-VADSSNHRVQVF-QSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
A P +AV + +V VAD RV VF ++ G ++ G G AG+ +P+ +AV
Sbjct: 65 ALEQPVAVAVSEEKELVYVADVGTDRVCVFDKNSGRYLYSIGERGKGAGEFNYPYGLAVF 124
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+ R+ VSD N VQ FD GR ++ G V +G P + + RV
Sbjct: 125 SDGRLWVSDPENFTVQEFDAKGRYLRTIG--VAAYGI---------KPGLMCLGQGGRVY 173
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
+SD HR+ IFD GR + G + L P+G+ D G + V D +I+ T
Sbjct: 174 ISDLARHRIVIFDARGRYM------GEIKAGLTHPQGILADSSGSLWVVDEAQCQIKKIT 227
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 110/240 (45%), Gaps = 35/240 (14%)
Query: 88 LKTNCVFLAFTWPRGIAVGPDNSIVVADSSN---HRVQVFQSDGTFVGKFGSMGNKAGQL 144
LK ++LAF A G N ++ S+ H Q + +++ + G + G L
Sbjct: 10 LKKPALYLAFLMAFFTA-GFLNWLIGESHSHLLVHLPQKIEDRPSYL--YSLTGGEKGAL 66
Query: 145 EHPHYIAVSNTNRVI-VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
E P +AVS ++ V+D RV +FD N G ++ G G AG+ +P+
Sbjct: 67 EQPVAVAVSEEKELVYVADVGTDRVCVFDKN------SGRYLYSIGERGKGAGEFNYPYG 120
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG--SEGSEEGQLKFPRGVAVDDQGYISV 261
+AV + R+ VSD N VQ FD GR + + G + G + G + +G G + +
Sbjct: 121 LAVFSDGRLWVSDPENFTVQEFDAKGRYLRTIGVAAYGIKPGLMCLGQG------GRVYI 174
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK-GL---EGVAVMSNGNILVCDRENHRIQ 317
D +RI IF G+++ GE K GL +G+ S+G++ V D +I+
Sbjct: 175 SDLARHRIVIFDARGRYM----------GEIKAGLTHPQGILADSSGSLWVVDEAQCQIK 224
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 213 IVSDSNNHRVQIF--DVNGRVITSFGSEGSEEGQLKFPRGVAV-DDQGYISVGDSGNNRI 269
++ +S++H + + R + G E+G L+ P VAV +++ + V D G +R+
Sbjct: 32 LIGESHSHLLVHLPQKIEDRPSYLYSLTGGEKGALEQPVAVAVSEEKELVYVADVGTDRV 91
Query: 270 QIFTPD-GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+F + G++L + G G G GEF G+AV S+G + V D EN +Q F
Sbjct: 92 CVFDKNSGRYLYSIGERGKGAGEFNYPYGLAVFSDGRLWVSDPENFTVQEF 142
>gi|242011761|ref|XP_002426615.1| brat protein, putative [Pediculus humanus corporis]
gi|212510764|gb|EEB13877.1| brat protein, putative [Pediculus humanus corporis]
Length = 866
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 110/259 (42%), Gaps = 44/259 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-VSNT 155
F P G +G + I+VAD++NHR+QVF+ +GTF +FG+ G G L +P +A V ++
Sbjct: 610 FNSPHGFCLGTEEDIIVADTNNHRIQVFEKNGTFKFQFGNPGKDEGHLFYPRKVAVVKSS 669
Query: 156 NRVIVSDSNNH--RVQIFDVNGRVFQ---------------------------SDGTFV- 185
+ +V D N R+QIF NG + S FV
Sbjct: 670 GKFVVCDRGNERSRMQIFTKNGHFVKKISIRYIDIVAGLAVTSQGHIVAVDSVSPTVFVI 729
Query: 186 ---GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
G + + + P IA+ N V D H V +F +G + G E
Sbjct: 730 SETGDLLKWFDCSDHMREPSDIAI-NEKEYYVCDFKGHCVVVFSEDGDFLRRIGCESV-- 786
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNR--IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
FP G+ V D G + VGDS NR + +F +G L F C GL+ +
Sbjct: 787 --TNFPNGIDVSDAGDVLVGDSHGNRFHVAVFNREGTMLSEFECPYVKVSRCCGLK---I 841
Query: 301 MSNGNILVCDRENHRIQVF 319
S G ++ + NH + V
Sbjct: 842 TSEGFVVTLAKNNHHLLVL 860
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 8/127 (6%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
KFG +G GQ PH + +IV+D+NNHR+Q+F+ NG FG+ G +EG L
Sbjct: 599 KFGQLGAGKGQFNSPHGFCLGTEEDIIVADTNNHRIQVFEKNGTFKFQFGNPGKDEGHLF 658
Query: 247 FPRGVA-VDDQGYISVGDSGN--NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
+PR VA V G V D GN +R+QIFT +G F++ + G+AV S
Sbjct: 659 YPRKVAVVKSSGKFVVCDRGNERSRMQIFTKNGHFVKKISIR-----YIDIVAGLAVTSQ 713
Query: 304 GNILVCD 310
G+I+ D
Sbjct: 714 GHIVAVD 720
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 20/190 (10%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
KFG +G GQ PH + +IV+D+NNHR+Q+F+ N GTF +FG+ G
Sbjct: 599 KFGQLGAGKGQFNSPHGFCLGTEEDIIVADTNNHRIQVFEKN-------GTFKFQFGNPG 651
Query: 193 NKAGQLEHPHYIA-VSNTNRVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
G L +P +A V ++ + +V D N R+QIF NG + +
Sbjct: 652 KDEGHLFYPRKVAVVKSSGKFVVCDRGNERSRMQIFTKNGHFVKKISIR-----YIDIVA 706
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
G+AV QG+I DS + + + + G L+ F C + +A+ + VC
Sbjct: 707 GLAVTSQGHIVAVDSVSPTVFVISETGDLLKWFDC----SDHMREPSDIAI-NEKEYYVC 761
Query: 310 DRENHRIQVF 319
D + H + VF
Sbjct: 762 DFKGHCVVVF 771
>gi|260835154|ref|XP_002612574.1| hypothetical protein BRAFLDRAFT_219598 [Branchiostoma floridae]
gi|229297952|gb|EEN68583.1| hypothetical protein BRAFLDRAFT_219598 [Branchiostoma floridae]
Length = 220
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 113/231 (48%), Gaps = 19/231 (8%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWPRGI 103
GS G PRG+AV I V D+ + ++QV P + FL + P GI
Sbjct: 1 GSAEGQLKRPRGVAVTSSGQIYVVDAGSEQIQVFSPEGEFIRR--FLTGRGNTRSDPWGI 58
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSD 162
AV + I+V D+ V VF+ G +VG+FG G L P IAV T+ + V+D
Sbjct: 59 AVF-HHGILVTDAEESVVNVFRKSGHYVGQFGK-----GILHRPCGIAVDPKTDTIFVTD 112
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAG-QLEHPHYIAVSNTNRVIVSDSNNHR 221
V++F V + F G G+ + P+++AV N +VSD H
Sbjct: 113 REC--VKVFRGENGVLMNMLYFYGCANPYGSYVDFKYPLPYHVAVDKGN-AVVSDWREHC 169
Query: 222 VQIFDV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
V++FD+ NG +I G+ G+ G L+ PRGV +D G + V D GN R+Q+
Sbjct: 170 VKVFDIENGVLIKRIGARGARVGGLEHPRGVCLDRTGNVIVADHGNKRVQL 220
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PRG+AV I V D+ + ++QVF +G F+ +F + + P IAV + ++
Sbjct: 10 PRGVAVTSSGQIYVVDAGSEQIQVFSPEGEFIRRF--LTGRGNTRSDPWGIAVFHHG-IL 66
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSN 218
V+D+ V VF+ G +VG+FG G L P IAV T+ + V+D
Sbjct: 67 VTDAEESVVN-------VFRKSGHYVGQFGK-----GILHRPCGIAVDPKTDTIFVTDRE 114
Query: 219 NHRVQIFDVNGRVITS----FGSEGSEEGQLKF----PRGVAVDDQGYISVGDSGNNRIQ 270
V++F V+ + +G + F P VAVD +G V D + ++
Sbjct: 115 C--VKVFRGENGVLMNMLYFYGCANPYGSYVDFKYPLPYHVAVD-KGNAVVSDWREHCVK 171
Query: 271 IF-TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
+F +G ++ G G+ G + GV + GN++V D N R+Q+
Sbjct: 172 VFDIENGVLIKRIGARGARVGGLEHPRGVCLDRTGNVIVADHGNKRVQL 220
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 239 GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGV 298
GS EGQLK PRGVAV G I V D+G+ +IQ+F+P+G+F+R F G G+ G+
Sbjct: 1 GSAEGQLKRPRGVAVTSSGQIYVVDAGSEQIQVFSPEGEFIRRF-LTGRGNTRSDPW-GI 58
Query: 299 AVMSNGNILVCDRENHRIQVF 319
AV +G ILV D E + VF
Sbjct: 59 AVFHHG-ILVTDAEESVVNVF 78
>gi|345851882|ref|ZP_08804843.1| hypothetical protein SZN_18986 [Streptomyces zinciresistens K42]
gi|345636654|gb|EGX58200.1| hypothetical protein SZN_18986 [Streptomyces zinciresistens K42]
Length = 468
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 93/194 (47%), Gaps = 20/194 (10%)
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK--AGQLEHP 201
+ P+ IAV +T V V+D + HRV+ +GR+ GT F G A QL P
Sbjct: 1 MNRPYGIAVDSTGTVYVADFSGHRVRRITTDGRITTVAGTGAAGFRGDGGPAVAAQLNGP 60
Query: 202 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG---------SEEGQLKFPRGVA 252
+AV V ++DSNNHR++ +G++ T G+ + QL P GV
Sbjct: 61 REVAVDGAGAVYIADSNNHRIRKVTPDGKISTVAGTGAGGFRGDGGPATAAQLNLPLGVT 120
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGS---GDG------EFKGLEGVAVMSN 303
VD G + V D N+RI+ T DG G + GDG + G GVA+ +
Sbjct: 121 VDGAGVLHVADYYNHRIRRITADGVISTVAGTGAAGFRGDGGPAATAQLNGPHGVALNAA 180
Query: 304 GNILVCDRENHRIQ 317
G++ + D +NHR++
Sbjct: 181 GDLCIADLQNHRVR 194
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 109/247 (44%), Gaps = 29/247 (11%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDG--TFVGKFGSMGNK-------AGQLEHPHYI 150
P GIAV ++ VAD S HRV+ +DG T V G+ G + A QL P +
Sbjct: 4 PYGIAVDSTGTVYVADFSGHRVRRITTDGRITTVAGTGAAGFRGDGGPAVAAQLNGPREV 63
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN--KAGQLEHPHYIAVSN 208
AV V ++DSNNHR++ +G++ GT G F G A QL P + V
Sbjct: 64 AVDGAGAVYIADSNNHRIRKVTPDGKISTVAGTGAGGFRGDGGPATAAQLNLPLGVTVDG 123
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGSEG---------SEEGQLKFPRGVAVDDQGYI 259
+ V+D NHR++ +G + T G+ + QL P GVA++ G +
Sbjct: 124 AGVLHVADYYNHRIRRITADGVISTVAGTGAAGFRGDGGPAATAQLNGPHGVALNAAGDL 183
Query: 260 SVGDSGNNRIQIFTPDGQF---------LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
+ D N+R++ T DG + GVA+ S G + +CD
Sbjct: 184 CIADLQNHRVRKVTADGVISTVAGTGAAGFGGDGGPAAAARLNSPVGVALDSAGTLYICD 243
Query: 311 RENHRIQ 317
NHR++
Sbjct: 244 YGNHRVR 250
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 105/253 (41%), Gaps = 34/253 (13%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT--------------NCVFLAFTWPRGI 103
P GIAV ++ VAD S HRV+ + T V PR +
Sbjct: 4 PYGIAVDSTGTVYVADFSGHRVRRITTDGRITTVAGTGAAGFRGDGGPAVAAQLNGPREV 63
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGN---------KAGQLEHPHYIAVSN 154
AV ++ +ADS+NHR++ DG G+ A QL P + V
Sbjct: 64 AVDGAGAVYIADSNNHRIRKVTPDGKISTVAGTGAGGFRGDGGPATAAQLNLPLGVTVDG 123
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAG--QLEHPHYIAVSNTNRV 212
+ V+D NHR++ +G + GT F G A QL PH +A++ +
Sbjct: 124 AGVLHVADYYNHRIRRITADGVISTVAGTGAAGFRGDGGPAATAQLNGPHGVALNAAGDL 183
Query: 213 IVSDSNNHRVQIFDVNGRVIT---------SFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
++D NHRV+ +G + T + +L P GVA+D G + + D
Sbjct: 184 CIADLQNHRVRKVTADGVISTVAGTGAAGFGGDGGPAAAARLNSPVGVALDSAGTLYICD 243
Query: 264 SGNNRIQIFTPDG 276
GN+R++ T DG
Sbjct: 244 YGNHRVRKMTADG 256
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 99/250 (39%), Gaps = 34/250 (13%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT--------------NCVFLAFTWPRGI 103
PR +AV ++ +ADS+NHR++ P + T P G+
Sbjct: 60 PREVAVDGAGAVYIADSNNHRIRKVTPDGKISTVAGTGAGGFRGDGGPATAAQLNLPLGV 119
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTF--VGKFGSMGNK-------AGQLEHPHYIAVSN 154
V + VAD NHR++ +DG V G+ G + QL PH +A++
Sbjct: 120 TVDGAGVLHVADYYNHRIRRITADGVISTVAGTGAAGFRGDGGPAATAQLNGPHGVALNA 179
Query: 155 TNRVIVSDSNNHRVQIFDVNGRV--FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
+ ++D NHRV+ +G + G A +L P +A+ + +
Sbjct: 180 AGDLCIADLQNHRVRKVTADGVISTVAGTGAAGFGGDGGPAAAARLNSPVGVALDSAGTL 239
Query: 213 IVSDSNNHRVQIFDVNGRVIT---------SFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
+ D NHRV+ +G + T + QL PR VAVD + D
Sbjct: 240 YICDYGNHRVRKMTADGVISTVAGTGAAGYGGDGGPAASAQLNGPRKVAVDCVDSLYFTD 299
Query: 264 SGNNRIQIFT 273
NNR++ T
Sbjct: 300 HVNNRVRKVT 309
>gi|291241921|ref|XP_002740858.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 701
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 113/222 (50%), Gaps = 23/222 (10%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRV 158
PR +A+ DN + D++N +V V G + FGS +++ P IA++ T V
Sbjct: 499 PRDVAISDDNEYFMTDNNNKQVVVSDEYGKLIRMFGS-----SEIDDPWGIAINPVTKNV 553
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
VS+ + H + R + G ++ FG G+K + P+ +A+++ V V++
Sbjct: 554 YVSECSKHFI-------RKYTQGGVYIKSFGKSGDKQ-EFNRPYMLAINSKGMVYVAEYW 605
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
NHR+Q+F+ + + + F S G + ++ P+GVAVD Y+ V S N ++ +GQF
Sbjct: 606 NHRIQVFNSDDQFMFEFSSTG--DSRMSNPKGVAVDKNDYVYV--SSNRKVTKHDSNGQF 661
Query: 279 LRAFGCWGSGDGE-FKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ C D + G GVAV ++G I V D N I+VF
Sbjct: 662 I----CRIDSDKDRLSGPCGVAVCNDGRIAVVDCGNKCIKVF 699
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 16/216 (7%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGP-DNSIVVADS 116
PR +A+ DN + D++N +V V + L P GIA+ P ++ V++
Sbjct: 499 PRDVAISDDNEYFMTDNNNKQVVVSDEYGKLIRMFGSSEIDDPWGIAINPVTKNVYVSEC 558
Query: 117 SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
S H ++ + G ++ FG G+K + P+ +A+++ V V++ NHR+Q+F+
Sbjct: 559 SKHFIRKYTQGGVYIKSFGKSGDKQ-EFNRPYMLAINSKGMVYVAEYWNHRIQVFN---- 613
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
SD F+ +F S G+ ++ +P +AV + V V S+N +V D NG+ I
Sbjct: 614 ---SDDQFMFEFSSTGD--SRMSNPKGVAVDKNDYVYV--SSNRKVTKHDSNGQFICRI- 665
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
S++ +L P GVAV + G I+V D GN I++F
Sbjct: 666 --DSDKDRLSGPCGVAVCNDGRIAVVDCGNKCIKVF 699
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 17/196 (8%)
Query: 114 ADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 173
D N+RV + SDG + F G A +P +A+S+ N ++D+NN +V + D
Sbjct: 467 TDRGNNRVTMHDSDGNYKQSFTFTGQFATPF-NPRDVAISDDNEYFMTDNNNKQVVVSDE 525
Query: 174 NGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVI 232
G+ + FGS +++ P IA++ T V VS+ + H ++ + G I
Sbjct: 526 YGK-------LIRMFGS-----SEIDDPWGIAINPVTKNVYVSECSKHFIRKYTQGGVYI 573
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
SFG G ++ + P +A++ +G + V + N+RIQ+F D QF+ F +GD
Sbjct: 574 KSFGKSGDKQ-EFNRPYMLAINSKGMVYVAEYWNHRIQVFNSDDQFMFEFS--STGDSRM 630
Query: 293 KGLEGVAVMSNGNILV 308
+GVAV N + V
Sbjct: 631 SNPKGVAVDKNDYVYV 646
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 17/161 (10%)
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+D N+RV + D +G QS TF G+F + N P +A+S+ N ++D+NN
Sbjct: 467 TDRGNNRVTMHDSDGNYKQS-FTFTGQFATPFN-------PRDVAISDDNEYFMTDNNNK 518
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIFTPDGQFL 279
+V + D G++I FGS ++ P G+A++ + V + + I+ +T G ++
Sbjct: 519 QVVVSDEYGKLIRMFGS-----SEIDDPWGIAINPVTKNVYVSECSKHFIRKYTQGGVYI 573
Query: 280 RAFGCWGSGDG-EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++FG SGD EF +A+ S G + V + NHRIQVF
Sbjct: 574 KSFG--KSGDKQEFNRPYMLAINSKGMVYVAEYWNHRIQVF 612
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 16/124 (12%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------AFTWPRGIAVGP 107
F P +A+ + VA+ NHR+QV F+ +F + P+G+AV
Sbjct: 585 FNRPYMLAINSKGMVYVAEYWNHRIQV----FNSDDQFMFEFSSTGDSRMSNPKGVAVDK 640
Query: 108 DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 167
++ + V SSN +V S+G F+ + S ++ L P +AV N R+ V D N
Sbjct: 641 NDYVYV--SSNRKVTKHDSNGQFICRIDSDKDR---LSGPCGVAVCNDGRIAVVDCGNKC 695
Query: 168 VQIF 171
+++F
Sbjct: 696 IKVF 699
>gi|326445969|ref|ZP_08220703.1| hypothetical protein SclaA2_33112 [Streptomyces clavuligerus ATCC
27064]
Length = 508
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 126/303 (41%), Gaps = 43/303 (14%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT--------------NCVFLAFTWPRGI 103
P GIAV ++ +D +NHRV+ + T V PR +
Sbjct: 44 PYGIAVDSAGTLYFSDYNNHRVRKITTDGKVSTVAGIGSAGYRGDNGPAVSAQLNCPREV 103
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTF-------VGKFGSMGN--KAGQLEHPHYIAVSN 154
AV ++ V D+ NHRV+ +DGT V F G A +L P +AV +
Sbjct: 104 AVDGAGAVYVTDAENHRVRKITADGTISTVVGTGVAGFSGDGGPATAARLNRPFGVAVDS 163
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGT-FVGKFGSMGNKA-GQLEHPHYIAVSNTNRV 212
T + V++ NN+R++ +G + GT G G G A QL P+ +AV V
Sbjct: 164 TGVLYVTEYNNNRIRKVAADGTISTVAGTGATGNRGDDGPAASAQLNRPYGVAVDGAGAV 223
Query: 213 IVSDSNNHRVQIFDVNGRVIT---------SFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
++D++NHR++ +G + T + +L P GV +D G + V D
Sbjct: 224 YIADTDNHRIRKITADGTISTVAGTGTGGFDGDGGPATAARLNRPMGVVIDSTGTLYVAD 283
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGS---------GDGEFKGLEGVAVMSNGNILVCDRENH 314
GN+RI+ T DG+ G + GVAV + + D NH
Sbjct: 284 YGNHRIRKITTDGKIGTVAGTGTGGFGGDGGPPASAQVNNSLGVAVDCVDTLYIADYGNH 343
Query: 315 RIQ 317
R++
Sbjct: 344 RVR 346
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 92/199 (46%), Gaps = 24/199 (12%)
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK----AG 196
A QL P+ IAV + + SD NNHRV+ +G+V G +G G G+ +
Sbjct: 38 AAQLNRPYGIAVDSAGTLYFSDYNNHRVRKITTDGKVSTVAG--IGSAGYRGDNGPAVSA 95
Query: 197 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV-------ITSFGSEG--SEEGQLKF 247
QL P +AV V V+D+ NHRV+ +G + + F +G + +L
Sbjct: 96 QLNCPREVAVDGAGAVYVTDAENHRVRKITADGTISTVVGTGVAGFSGDGGPATAARLNR 155
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG----DGEFKGLE-----GV 298
P GVAVD G + V + NNRI+ DG G +G DG + GV
Sbjct: 156 PFGVAVDSTGVLYVTEYNNNRIRKVAADGTISTVAGTGATGNRGDDGPAASAQLNRPYGV 215
Query: 299 AVMSNGNILVCDRENHRIQ 317
AV G + + D +NHRI+
Sbjct: 216 AVDGAGAVYIADTDNHRIR 234
>gi|427779983|gb|JAA55443.1| Putative vesicle coat complex copi beta' subunit [Rhipicephalus
pulchellus]
Length = 804
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 112/264 (42%), Gaps = 54/264 (20%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNT 155
F+ P G +G + I+VAD++NHR+QVF G F FG G + GQL +P +AV ++
Sbjct: 548 FSSPHGFCLGLEEEIIVADTNNHRIQVFDKSGEFKYTFGVAGKEEGQLWYPRKVAVIKSS 607
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG------------SMGNK--------- 194
+ ++ D N R ++ ++F G F+ K + NK
Sbjct: 608 GKYVICDRGNERSRM-----QIFTKGGHFIKKIAIRYIDIVAGLAITAENKIVAVDSVSP 662
Query: 195 -------AGQL----------EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS 237
AG+L P IA+S I D H V +F+ G I G
Sbjct: 663 TVFVISEAGELLLWFDCSEYMREPSDIAISGREYYIC-DFKGHCVIVFNDEGHFIRKIGC 721
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNR--IQIFTPDGQFLRAFGCWGSGDGEFKGL 295
+G FP G+ + D G + VGDS NR + +F+ DG L F C GL
Sbjct: 722 ----DGMTNFPNGIDISDAGDVLVGDSHGNRFHVVVFSRDGLLLSEFECPYVKVSRCCGL 777
Query: 296 EGVAVMSNGNILVCDRENHRIQVF 319
+ + S G ++ + NH + V
Sbjct: 778 K---ITSEGYVVTLAKNNHHVLVL 798
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
KFG +G GQ PH + +IV+D+NNHR+Q+FD +G +FG G EEGQL
Sbjct: 537 KFGQLGPSKGQFSSPHGFCLGLEEEIIVADTNNHRIQVFDKSGEFKYTFGVAGKEEGQLW 596
Query: 247 FPRGVAV-DDQGYISVGDSGN--NRIQIFTPDGQFLRAFG 283
+PR VAV G + D GN +R+QIFT G F++
Sbjct: 597 YPRKVAVIKSSGKYVICDRGNERSRMQIFTKGGHFIKKIA 636
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 20/190 (10%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
KFG +G GQ PH + +IV+D+NNHR+Q+FD +G F FG G
Sbjct: 537 KFGQLGPSKGQFSSPHGFCLGLEEEIIVADTNNHRIQVFDKSGE-------FKYTFGVAG 589
Query: 193 NKAGQLEHPHYIAV-SNTNRVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
+ GQL +P +AV ++ + ++ D N R+QIF G I +
Sbjct: 590 KEEGQLWYPRKVAVIKSSGKYVICDRGNERSRMQIFTKGGHFIKKIAIR-----YIDIVA 644
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
G+A+ + I DS + + + + G+ L F C E+ +S +C
Sbjct: 645 GLAITAENKIVAVDSVSPTVFVISEAGELLLWFDC-----SEYMREPSDIAISGREYYIC 699
Query: 310 DRENHRIQVF 319
D + H + VF
Sbjct: 700 DFKGHCVIVF 709
>gi|340380192|ref|XP_003388607.1| PREDICTED: tripartite motif-containing protein 3-like [Amphimedon
queenslandica]
Length = 604
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 14/176 (7%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
G+AV + + + + VQVF DGT V + GS G GQL++P + + +R+ VS
Sbjct: 344 GVAVHTNGEVFAGNCIDGFVQVFSEDGTAVRRIGSKGYGNGQLQYPWGLLLVG-DRLYVS 402
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
D+N HRV+ F + G ++G+FGS G+ GQ +P ++ ++V+D N R
Sbjct: 403 DNNLHRVRYFSA------TTGQYIGQFGSEGDGNGQFSNPRGMSTDGKGNILVADYVNSR 456
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
VQ+F +G + +G VAVD++G I V N +Q+F+PDG+
Sbjct: 457 VQVFKEDGTFVQVIQCDGR-------ATDVAVDNEGKIHVTIYNLNHVQVFSPDGK 505
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 79/145 (54%), Gaps = 9/145 (6%)
Query: 176 RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD-VNGRVITS 234
+VF DGT V + GS G GQL++P + + +R+ VSD+N HRV+ F G+ I
Sbjct: 364 QVFSEDGTAVRRIGSKGYGNGQLQYPWGLLLVG-DRLYVSDNNLHRVRYFSATTGQYIGQ 422
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
FGSEG GQ PRG++ D +G I V D N+R+Q+F DG F++ C G
Sbjct: 423 FGSEGDGNGQFSNPRGMSTDGKGNILVADYVNSRVQVFKEDGTFVQVIQCDGRAT----- 477
Query: 295 LEGVAVMSNGNILVCDRENHRIQVF 319
VAV + G I V + +QVF
Sbjct: 478 --DVAVDNEGKIHVTIYNLNHVQVF 500
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 31/218 (14%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQ-SDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
+P G+ + D + V+D++ HRV+ F + G ++G+FGS G+ GQ +P ++
Sbjct: 386 LQYPWGLLLVGDR-LYVSDNNLHRVRYFSATTGQYIGQFGSEGDGNGQFSNPRGMSTDGK 444
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
++V+D N RVQ VF+ DGTFV G +AV N ++ V+
Sbjct: 445 GNILVADYVNSRVQ-------VFKEDGTFVQVIQCDGRATD-------VAVDNEGKIHVT 490
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
N + VQ+F +G+ S G G+A+DD+GYI + N+ + + +PD
Sbjct: 491 IYNLNHVQVFSPDGKTHLDTYSNGRS-------YGIAIDDEGYIFLSHH-NDYLHVLSPD 542
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
+ ++ + +G A+ +G I V + +N
Sbjct: 543 RKEVKLISGLSTP-------KGGALDKDGYIYVAEYDN 573
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 102/234 (43%), Gaps = 44/234 (18%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF------ 97
+IGS+G G +P G+ + D + V+D++ HRV+ +F T F
Sbjct: 375 RIGSKGYGNGQLQYPWGLLLVGDR-LYVSDNNLHRVR----YFSATTGQYIGQFGSEGDG 429
Query: 98 ----TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
+ PRG++ +I+VAD N RVQVF+ DGTFV G +AV
Sbjct: 430 NGQFSNPRGMSTDGKGNILVADYVNSRVQVFKEDGTFVQVIQCDGRATD-------VAVD 482
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
N ++ V+ N + VQ+F +G+ T + + S G G IA+ + +
Sbjct: 483 NEGKIHVTIYNLNHVQVFSPDGK------THLDTY-SNGRSYG-------IAIDDEGYIF 528
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+S N++ V++ E L P+G A+D GYI V + N
Sbjct: 529 LSHHNDYL--------HVLSPDRKEVKLISGLSTPKGGALDKDGYIYVAEYDNK 574
>gi|294817139|ref|ZP_06775781.1| Receptor protein kinase [Streptomyces clavuligerus ATCC 27064]
gi|294321954|gb|EFG04089.1| Receptor protein kinase [Streptomyces clavuligerus ATCC 27064]
Length = 510
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 129/305 (42%), Gaps = 47/305 (15%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT--------------NCVFLAFTWPRGI 103
P GIAV ++ +D +NHRV+ + T V PR +
Sbjct: 46 PYGIAVDSAGTLYFSDYNNHRVRKITTDGKVSTVAGIGSAGYRGDNGPAVSAQLNCPREV 105
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTF-----VGKFGSMGN----KAGQLEHPHYIAVSN 154
AV ++ V D+ NHRV+ +DGT G G G+ A +L P +AV +
Sbjct: 106 AVDGAGAVYVTDAENHRVRKITADGTISTVVGTGVAGFSGDGGPATAARLNRPFGVAVDS 165
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN----KAGQLEHPHYIAVSNTN 210
T + V++ NN+R++ +G + GT G G+ G+ + QL P+ +AV
Sbjct: 166 TGVLYVTEYNNNRIRKVAADGTISTVAGT--GATGNRGDDGPAASAQLNRPYGVAVDGAG 223
Query: 211 RVIVSDSNNHRVQIFDVNGRVIT---------SFGSEGSEEGQLKFPRGVAVDDQGYISV 261
V ++D++NHR++ +G + T + +L P GV +D G + V
Sbjct: 224 AVYIADTDNHRIRKITADGTISTVAGTGTGGFDGDGGPATAARLNRPMGVVIDSTGTLYV 283
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGS---------GDGEFKGLEGVAVMSNGNILVCDRE 312
D GN+RI+ T DG+ G + GVAV + + D
Sbjct: 284 ADYGNHRIRKITTDGKIGTVAGTGTGGFGGDGGPPASAQVNNSLGVAVDCVDTLYIADYG 343
Query: 313 NHRIQ 317
NHR++
Sbjct: 344 NHRVR 348
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 92/199 (46%), Gaps = 24/199 (12%)
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK----AG 196
A QL P+ IAV + + SD NNHRV+ +G+V G +G G G+ +
Sbjct: 40 AAQLNRPYGIAVDSAGTLYFSDYNNHRVRKITTDGKVSTVAG--IGSAGYRGDNGPAVSA 97
Query: 197 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV-------ITSFGSEG--SEEGQLKF 247
QL P +AV V V+D+ NHRV+ +G + + F +G + +L
Sbjct: 98 QLNCPREVAVDGAGAVYVTDAENHRVRKITADGTISTVVGTGVAGFSGDGGPATAARLNR 157
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG----DGEFKGLE-----GV 298
P GVAVD G + V + NNRI+ DG G +G DG + GV
Sbjct: 158 PFGVAVDSTGVLYVTEYNNNRIRKVAADGTISTVAGTGATGNRGDDGPAASAQLNRPYGV 217
Query: 299 AVMSNGNILVCDRENHRIQ 317
AV G + + D +NHRI+
Sbjct: 218 AVDGAGAVYIADTDNHRIR 236
>gi|260792730|ref|XP_002591367.1| hypothetical protein BRAFLDRAFT_93988 [Branchiostoma floridae]
gi|229276572|gb|EEN47378.1| hypothetical protein BRAFLDRAFT_93988 [Branchiostoma floridae]
Length = 203
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 116 SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 175
+ N +QV+ +G K L P +AV R++V+D +
Sbjct: 18 TGNQAIQVYSREGKLTKTL-----KPDCLRDPFGVAVLQDGRMVVADITQKSCLLL---- 68
Query: 176 RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI-VSDSNNHRVQIFDVNGRVITS 234
Q DG+ + G GQL +P +IAV+ + ++ V+D HRV +FD+ G++ S
Sbjct: 69 ---QPDGSLIRDIGK-----GQLLYPQFIAVNESRDLLFVTDWEAHRVFVFDLEGKLKFS 120
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
FG G +EGQL P G+ VD G I V + N R+Q+F PDG +LR
Sbjct: 121 FGKLGQDEGQLYHPTGITVDPAGNIIVVNRDNGRLQVFGPDGTYLRT 167
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 13/180 (7%)
Query: 47 SRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVG 106
++ +P C P G+AV D +VVAD + + P L + +P+ IAV
Sbjct: 33 TKTLKPDCLRDPFGVAVLQDGRMVVADITQKSCLLLQPDGSLIRDIGKGQLLYPQFIAVN 92
Query: 107 PDNSIV-VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
++ V D HRV VF +G FG +G GQL HP I V +IV + +N
Sbjct: 93 ESRDLLFVTDWEAHRVFVFDLEGKLKFSFGKLGQDEGQLYHPTGITVDPAGNIIVVNRDN 152
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
R+Q+F +G ++ T G F PH IA++ N + V+ V+++
Sbjct: 153 GRLQVFGPDGTYLRTVATVKGGF------------PHGIALTPDNHIAVACFYGQCVELY 200
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 22/154 (14%)
Query: 183 TFVGKFGSMGNKAGQ----------------LEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
T + F + GN+A Q L P +AV R++V+D +
Sbjct: 10 TLINDFFTTGNQAIQVYSREGKLTKTLKPDCLRDPFGVAVLQDGRMVVADITQKSCLLLQ 69
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
+G +I G +GQL +P+ +AV++ + + V D +R+ +F +G+ +FG
Sbjct: 70 PDGSLIRDIG-----KGQLLYPQFIAVNESRDLLFVTDWEAHRVFVFDLEGKLKFSFGKL 124
Query: 286 GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G +G+ G+ V GNI+V +R+N R+QVF
Sbjct: 125 GQDEGQLYHPTGITVDPAGNIIVVNRDNGRLQVF 158
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+L+F G G + G P GI V P +I+V + N R+QV P + +
Sbjct: 116 KLKFSFGKLGQDEGQLYHPTGITVDPAGNIIVVNRDNGRLQVFGPDGTYLRTVATVKGGF 175
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSD 127
P GIA+ PDN I VA V++++ +
Sbjct: 176 PHGIALTPDNHIAVACFYGQCVELYRYE 203
>gi|254390149|ref|ZP_05005369.1| NHL repeat-containing protein [Streptomyces clavuligerus ATCC
27064]
gi|197703856|gb|EDY49668.1| NHL repeat-containing protein [Streptomyces clavuligerus ATCC
27064]
Length = 527
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 129/305 (42%), Gaps = 47/305 (15%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT--------------NCVFLAFTWPRGI 103
P GIAV ++ +D +NHRV+ + T V PR +
Sbjct: 63 PYGIAVDSAGTLYFSDYNNHRVRKITTDGKVSTVAGIGSAGYRGDNGPAVSAQLNCPREV 122
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTF-----VGKFGSMGN----KAGQLEHPHYIAVSN 154
AV ++ V D+ NHRV+ +DGT G G G+ A +L P +AV +
Sbjct: 123 AVDGAGAVYVTDAENHRVRKITADGTISTVVGTGVAGFSGDGGPATAARLNRPFGVAVDS 182
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN----KAGQLEHPHYIAVSNTN 210
T + V++ NN+R++ +G + GT G G+ G+ + QL P+ +AV
Sbjct: 183 TGVLYVTEYNNNRIRKVAADGTISTVAGT--GATGNRGDDGPAASAQLNRPYGVAVDGAG 240
Query: 211 RVIVSDSNNHRVQIFDVNGRVIT---------SFGSEGSEEGQLKFPRGVAVDDQGYISV 261
V ++D++NHR++ +G + T + +L P GV +D G + V
Sbjct: 241 AVYIADTDNHRIRKITADGTISTVAGTGTGGFDGDGGPATAARLNRPMGVVIDSTGTLYV 300
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGS---------GDGEFKGLEGVAVMSNGNILVCDRE 312
D GN+RI+ T DG+ G + GVAV + + D
Sbjct: 301 ADYGNHRIRKITTDGKIGTVAGTGTGGFGGDGGPPASAQVNNSLGVAVDCVDTLYIADYG 360
Query: 313 NHRIQ 317
NHR++
Sbjct: 361 NHRVR 365
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 92/199 (46%), Gaps = 24/199 (12%)
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK----AG 196
A QL P+ IAV + + SD NNHRV+ +G+V G +G G G+ +
Sbjct: 57 AAQLNRPYGIAVDSAGTLYFSDYNNHRVRKITTDGKVSTVAG--IGSAGYRGDNGPAVSA 114
Query: 197 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV-------ITSFGSEG--SEEGQLKF 247
QL P +AV V V+D+ NHRV+ +G + + F +G + +L
Sbjct: 115 QLNCPREVAVDGAGAVYVTDAENHRVRKITADGTISTVVGTGVAGFSGDGGPATAARLNR 174
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG----DGEFKGLE-----GV 298
P GVAVD G + V + NNRI+ DG G +G DG + GV
Sbjct: 175 PFGVAVDSTGVLYVTEYNNNRIRKVAADGTISTVAGTGATGNRGDDGPAASAQLNRPYGV 234
Query: 299 AVMSNGNILVCDRENHRIQ 317
AV G + + D +NHRI+
Sbjct: 235 AVDGAGAVYIADTDNHRIR 253
>gi|260794814|ref|XP_002592402.1| hypothetical protein BRAFLDRAFT_67267 [Branchiostoma floridae]
gi|229277621|gb|EEN48413.1| hypothetical protein BRAFLDRAFT_67267 [Branchiostoma floridae]
Length = 639
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 126/301 (41%), Gaps = 46/301 (15%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-------------CFPHFDLK 89
G G EPG F+ P GI V + I VAD N R+QV P + +
Sbjct: 356 LTFGGEGPEPGQFSRPLGITVSEEGEIFVADMKNQRIQVFTLQSTLARHFPTVVPGEECR 415
Query: 90 TNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSD--GTFVGKFGSMGNKAGQLEHP 147
W + + P N VA R+ V + F K+ G G
Sbjct: 416 ARKKKKNKDWSK---MCPHN---VAMDGKGRLWVVGNTEFAEFAVKYDKQGMALG----- 464
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIF---------DVNGRVF-QSDGTFVGKFGSMGNKAGQ 197
I ++ T ++I + R IF ++N V V + +MG G
Sbjct: 465 -TIKLTRTKQIIAIAVDTKRNHIFIPQITGERPNLNCEVLVLRPAMTVAR--TMGWGKG- 520
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
++ P I V ++VSD N V ++ +G+ + FG EGS EGQL+ P G+ D G
Sbjct: 521 MKDPSNITVDGEGNILVSDCENDCVYVYAQDGQFLFKFGGEGSGEGQLQGPMGICTDKSG 580
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
I V D GN+R+++F G+FL+ + + GVA+ G +++ D +NH +
Sbjct: 581 NIIVADRGNSRLEMFDKTGRFLKHIPV------DIESPWGVAMAPQGQLVITDFDNHTVT 634
Query: 318 V 318
+
Sbjct: 635 I 635
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 106/238 (44%), Gaps = 25/238 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F+ P GI V + I VAD N R+QVF T F ++ + A
Sbjct: 368 FSRPLGITVSEEGEIFVADMKNQRIQVFTLQSTLARHFPTV------VPGEECRARKKKK 421
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
S H V + D GR++ T +F +K G I ++ T ++I
Sbjct: 422 NKDWSKMCPHNVAM-DGKGRLWVVGNTEFAEFAVKYDKQGMALG--TIKLTRTKQIIAIA 478
Query: 217 SNNHRVQIF---------DVNGRVI------TSFGSEGSEEGQLKFPRGVAVDDQGYISV 261
+ R IF ++N V+ T + G +G +K P + VD +G I V
Sbjct: 479 VDTKRNHIFIPQITGERPNLNCEVLVLRPAMTVARTMGWGKG-MKDPSNITVDGEGNILV 537
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D N+ + ++ DGQFL FG GSG+G+ +G G+ +GNI+V DR N R+++F
Sbjct: 538 SDCENDCVYVYAQDGQFLFKFGGEGSGEGQLQGPMGICTDKSGNIIVADRGNSRLEMF 595
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD-----LK 89
Y Q + FK G GS G P GI +I+VAD N R+++ FD LK
Sbjct: 548 YAQDGQFLFKFGGEGSGEGQLQGPMGICTDKSGNIIVADRGNSRLEM----FDKTGRFLK 603
Query: 90 TNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
V + W G+A+ P +V+ D NH V + Q
Sbjct: 604 HIPVDIESPW--GVAMAPQGQLVITDFDNHTVTIVQ 637
>gi|307152274|ref|YP_003887658.1| hypothetical protein Cyan7822_2408 [Cyanothece sp. PCC 7822]
gi|306982502|gb|ADN14383.1| protein of unknown function DUF1555 [Cyanothece sp. PCC 7822]
Length = 411
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 127/281 (45%), Gaps = 40/281 (14%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGI 103
+IG G PG P+GI V DS T +F++ G
Sbjct: 70 QIGEPGFAPGQLFVPQGIGV--------QDS---------------TGDIFIS----NGR 102
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ-LEHPHYIAVSN-TNRVIVS 161
+ PD S + +RV VF + G ++ GS G+ L+ P + T + V
Sbjct: 103 GLNPDGSF--NPNVGNRVDVFNAQGNYLRSVGSGRQGHGEGLDEPADLKFDPLTGNLYVG 160
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA-GQLEH-PHYIAVSNTNRVIVSDSNN 219
D N + +++ N G F+ FGS G G+L P ++ + + V+D +
Sbjct: 161 DVFNSEIDVYNPN------TGAFITSFGSFGGPVDGRLFFGPGGMSFNKNGILYVTDFSE 214
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD-DQGYISVGDSGNNRIQIFTPDGQF 278
++++ +G +I + GS GS GQ P G+ + + G I V D NNR+Q+ +G
Sbjct: 215 DVIKVYGRDGELINTIGSSGSGLGQFLGPAGITISPNTGNIYVNDQYNNRVQVLNAEGDT 274
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L AFG G G G+FK G+ V N NI V D +N R+QVF
Sbjct: 275 LFAFGTRGDGPGQFKEPIGIEVDENENIYVADSQNSRVQVF 315
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 11/178 (6%)
Query: 110 SIVVADSSNHRVQVFQSD-GTFVGKFGSMGNKA-GQLEH-PHYIAVSNTNRVIVSDSNNH 166
++ V D N + V+ + G F+ FGS G G+L P ++ + + V+D +
Sbjct: 156 NLYVGDVFNSEIDVYNPNTGAFITSFGSFGGPVDGRLFFGPGGMSFNKNGILYVTDFSED 215
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSNNHRVQIF 225
++++ GR DG + GS G+ GQ P I +S NT + V+D N+RVQ+
Sbjct: 216 VIKVY---GR----DGELINTIGSSGSGLGQFLGPAGITISPNTGNIYVNDQYNNRVQVL 268
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
+ G + +FG+ G GQ K P G+ VD+ I V DS N+R+Q+F +G FL +FG
Sbjct: 269 NAEGDTLFAFGTRGDGPGQFKEPIGIEVDENENIYVADSQNSRVQVFDQNGNFLTSFG 326
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDN-SIVVADSSNHRVQVCFPHFDLKTNCVFL-------- 95
IGS GS G F P GI + P+ +I V D N+RVQV + + + +F
Sbjct: 230 IGSSGSGLGQFLGPAGITISPNTGNIYVNDQYNNRVQVL----NAEGDTLFAFGTRGDGP 285
Query: 96 -AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG 135
F P GI V + +I VADS N RVQVF +G F+ FG
Sbjct: 286 GQFKEPIGIEVDENENIYVADSQNSRVQVFDQNGNFLTSFG 326
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 24/39 (61%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV 81
F G+RG PG F P GI V + +I VADS N RVQV
Sbjct: 276 FAFGTRGDGPGQFKEPIGIEVDENENIYVADSQNSRVQV 314
>gi|89899073|ref|YP_521544.1| NHL repeat-containing protein [Rhodoferax ferrireducens T118]
gi|89343810|gb|ABD68013.1| NHL repeat protein [Rhodoferax ferrireducens T118]
Length = 384
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 123/270 (45%), Gaps = 34/270 (12%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------ 96
F +G E P G+A+ D+ I VADS + V FDLKT L
Sbjct: 79 FLLGEEKVE-DALVRPYGVAMS-DSKIYVADSRGPGLAV----FDLKTRKFSLMSGSGAG 132
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE-HPHYIAVSN 154
P +A+ D++ V D++ ++V V+ ++ +G G+ E P +A++
Sbjct: 133 RMQRPINVAIDADDTKYVTDTARNQVLVYDKGDRYLAAYG------GKDEFKPVDVAIAG 186
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG-SMGNKAGQLEHPHYIAVSNTNRVI 213
+R+ V D +H VQ+ D + G KFG S +K L P +AV +
Sbjct: 187 -DRLYVVDIEHHEVQVLD------KRSGKLQFKFGKSDVDKEKSLHQPTNLAVGRDGDIY 239
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
V ++ N RV F G+ + +G G GQ P+G+A+D G + V D+ +QIF
Sbjct: 240 VVETGNFRVARFTPEGKFVRHYGEAGQAPGQFARPKGIAMDRSGRMYVSDAAFQNVQIFD 299
Query: 274 PDGQFLRAFGCWGSGDGEFKGL---EGVAV 300
G+ L AFG G G+ GL GVA+
Sbjct: 300 GQGRVLMAFGQPG---GDLPGLNLPAGVAI 326
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 119/238 (50%), Gaps = 22/238 (9%)
Query: 86 FDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM-GNKAGQL 144
F L V A P G+A+ D+ I VADS + VF KF M G+ AG++
Sbjct: 79 FLLGEEKVEDALVRPYGVAMS-DSKIYVADSRGPGLAVFDLK---TRKFSLMSGSGAGRM 134
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE-HPHY 203
+ P +A+ + V+D+ ++V ++D R + G G+ E P
Sbjct: 135 QRPINVAIDADDTKYVTDTARNQVLVYDKGDRYLAAYG-------------GKDEFKPVD 181
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDV-NGRVITSFG-SEGSEEGQLKFPRGVAVDDQGYISV 261
+A++ +R+ V D +H VQ+ D +G++ FG S+ +E L P +AV G I V
Sbjct: 182 VAIAG-DRLYVVDIEHHEVQVLDKRSGKLQFKFGKSDVDKEKSLHQPTNLAVGRDGDIYV 240
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++GN R+ FTP+G+F+R +G G G+F +G+A+ +G + V D +Q+F
Sbjct: 241 VETGNFRVARFTPEGKFVRHYGEAGQAPGQFARPKGIAMDRSGRMYVSDAAFQNVQIF 298
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 99/213 (46%), Gaps = 20/213 (9%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT-----WPRGI 103
GS G P +A+ D++ V D++ ++V V +D K + A+ P +
Sbjct: 128 GSGAGRMQRPINVAIDADDTKYVTDTARNQVLV----YD-KGDRYLAAYGGKDEFKPVDV 182
Query: 104 AVGPDNSIVVADSSNHRVQVF-QSDGTFVGKFG-SMGNKAGQLEHPHYIAVSNTNRVIVS 161
A+ D VV D +H VQV + G KFG S +K L P +AV + V
Sbjct: 183 AIAGDRLYVV-DIEHHEVQVLDKRSGKLQFKFGKSDVDKEKSLHQPTNLAVGRDGDIYVV 241
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
++ N RV F +G FV +G G GQ P IA+ + R+ VSD+
Sbjct: 242 ETGNFRVA-------RFTPEGKFVRHYGEAGQAPGQFARPKGIAMDRSGRMYVSDAAFQN 294
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
VQIFD GRV+ +FG G + L P GVA+D
Sbjct: 295 VQIFDGQGRVLMAFGQPGGDLPGLNLPAGVAID 327
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 70/164 (42%), Gaps = 23/164 (14%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF-----------TWPRGIAVG 106
P +A+ D VV D +H VQV D ++ + F P +AVG
Sbjct: 179 PVDVAIAGDRLYVV-DIEHHEVQV----LDKRSGKLQFKFGKSDVDKEKSLHQPTNLAVG 233
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
D I V ++ N RV F +G FV +G G GQ P IA+ + R+ VSD+
Sbjct: 234 RDGDIYVVETGNFRVARFTPEGKFVRHYGEAGQAPGQFARPKGIAMDRSGRMYVSDAAFQ 293
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
VQIFD GRV + FG G L P +A+ N
Sbjct: 294 NVQIFDGQGRVLMA-------FGQPGGDLPGLNLPAGVAIDYDN 330
>gi|260787073|ref|XP_002588580.1| hypothetical protein BRAFLDRAFT_256439 [Branchiostoma floridae]
gi|229273744|gb|EEN44591.1| hypothetical protein BRAFLDRAFT_256439 [Branchiostoma floridae]
Length = 219
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 115/231 (49%), Gaps = 26/231 (11%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+AV D +IVV S V+ F G + KF S+G +P+ +AV RV+
Sbjct: 1 PGGLAVQTDGTIVV--RSGKEVEKFSPSGELINKF-SLGK---YCTNPYGLAVQRDGRVV 54
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D + H + +F+ +G +S V + G G + Q P++I V + +IV++ +
Sbjct: 55 VTDFHKHSIFLFEADGTRVKS----VRRNGK-GKEKVQFNKPYFICVDKEDNIIVANKGS 109
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN----------NRI 269
HRVQ+FD N FG +G E + P GV+ D +G I + + G+ ++
Sbjct: 110 HRVQVFDKNLNFQHKFGQKGIEPQDMFAPHGVSADSRGNIVLANVGDKTGEAGVEHGKKL 169
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGL-EGVAVMSNGNILVCDRENHRIQVF 319
Q+F DG ++ S D + L GVAV +G++ V D +H I+ +
Sbjct: 170 QVFRSDGTWVSTI----SNDRDKLNLPHGVAVTEDGHVFVADTGDHCIKKY 216
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 15/181 (8%)
Query: 56 TWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF--------LAFTWPRGIAVGP 107
T P G+AV D +VV D H + F + V + F P I V
Sbjct: 40 TNPYGLAVQRDGRVVVTDFHKHSI-FLFEADGTRVKSVRRNGKGKEKVQFNKPYFICVDK 98
Query: 108 DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 167
+++I+VA+ +HRVQVF + F KFG G + + PH ++ + +++++ +
Sbjct: 99 EDNIIVANKGSHRVQVFDKNLNFQHKFGQKGIEPQDMFAPHGVSADSRGNIVLANVGDKT 158
Query: 168 VQIFDVNGR---VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 224
+ +G+ VF+SDGT+V ++ N +L PH +AV+ V V+D+ +H ++
Sbjct: 159 GEAGVEHGKKLQVFRSDGTWV---STISNDRDKLNLPHGVAVTEDGHVFVADTGDHCIKK 215
Query: 225 F 225
+
Sbjct: 216 Y 216
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 48 RGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC-----FPHFDLKTNCVFLAFTWPRG 102
+G E F P I V +++I+VA+ +HRVQV F H + P G
Sbjct: 81 KGKEKVQFNKPYFICVDKEDNIIVANKGSHRVQVFDKNLNFQHKFGQKGIEPQDMFAPHG 140
Query: 103 IAVGPDNSIVVADSSN----------HRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
++ +IV+A+ + ++QVF+SDGT+V ++ N +L PH +AV
Sbjct: 141 VSADSRGNIVLANVGDKTGEAGVEHGKKLQVFRSDGTWV---STISNDRDKLNLPHGVAV 197
Query: 153 SNTNRVIVSDSNNHRVQIF 171
+ V V+D+ +H ++ +
Sbjct: 198 TEDGHVFVADTGDHCIKKY 216
>gi|405970508|gb|EKC35406.1| Tripartite motif-containing protein 2 [Crassostrea gigas]
Length = 985
Score = 90.1 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 65/207 (31%), Positives = 96/207 (46%), Gaps = 40/207 (19%)
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P G+ ++V D+ NH V+V+ S+G ++ G K ++ P I V+ + V
Sbjct: 752 FPIGVTTNSMGEVLVGDTGNHVVRVYNSEGKYLRDIG----KEMYMKRPSAIVVNYKDEV 807
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFV-----GKFG--------SMGNKAGQLEHPH--- 202
V D DV F++DGTF+ GK G G++ H
Sbjct: 808 FVKD---------DVAVFAFKADGTFIRTIAKGKLGHPFVFVLSQDGSRVDSFPFAHLCN 858
Query: 203 ----------YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
++AV R+IVSD + I D G+++ FG GS GQ + P GV
Sbjct: 859 PKAPGSSKCRFLAV-QAERLIVSDLGTSFIYISDNWGQILFEFGGYGSYNGQFREPSGVT 917
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFL 279
D QG + +GDS N+RIQIF P+G FL
Sbjct: 918 TDQQGNMLIGDSKNDRIQIFKPNGTFL 944
Score = 41.6 bits (96), Expect = 0.50, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 239 GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
G+EE +KFP GV + G + VGD+GN+ ++++ +G++LR G
Sbjct: 745 GTEE-IMKFPIGVTTNSMGEVLVGDTGNHVVRVYNSEGKYLRDIG 788
>gi|255531264|ref|YP_003091636.1| NHL repeat containing protein [Pedobacter heparinus DSM 2366]
gi|255344248|gb|ACU03574.1| NHL repeat containing protein [Pedobacter heparinus DSM 2366]
Length = 439
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 127/298 (42%), Gaps = 35/298 (11%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT------------NCVFLAFTWPRG 102
F P G+AV +++VAD NH ++ P + T F+ P
Sbjct: 140 FRNPEGLAVDAQGNVIVADRQNHTIRKISPAGQVTTIAGDGTAGYADGTGTAAKFSSPWK 199
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGN------KAGQLEHPHYIAVSNTN 156
+A+ P +I+VAD N +++ DG GS A + P +
Sbjct: 200 LAIDPLGNIIVADRDNFKIRKIAPDGAVTTLAGSTAGFADGTGSAAKFMQPLDVVADAQG 259
Query: 157 RVIVSDSNNHRVQIFDVNGRV--FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ V+D+ HR++ +G V DGT G + G +A + +P + V +IV
Sbjct: 260 NIYVADNTAHRIRKVSPSGTVTTLAGDGT-AGYLDATGVQA-KFRNPSGLTVDQQGNIIV 317
Query: 215 SDSNNHRVQIFDVNGRV--ITSFGSEGSEEGQ---LKF--PRGVAVDDQGYISVGDSGNN 267
+D NHR++ G V I G+ G +G KF P GVAVD G I V + N
Sbjct: 318 ADRLNHRIRKITPAGTVSTIAGAGTTGLLDGDALTAKFADPYGVAVDAGGNILVAELTNA 377
Query: 268 RIQIFTPDGQFLRAFG-CWGSGDG-----EFKGLEGVAVMSNGNILVCDRENHRIQVF 319
RI+ TP GQ G G DG +F + + + GNI V + NHRI++
Sbjct: 378 RIRKITPVGQVSTLAGSSAGFADGLSVNAKFNQPTDLDIDAKGNIYVAEVTNHRIRMI 435
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 100/227 (44%), Gaps = 15/227 (6%)
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 163
A GP + A +S + V F DGT G F A Q +P +AV VIV+D
Sbjct: 102 AEGPVFTYKAAPASEYIVSTFAGDGT-AGLFNGAAADA-QFRNPEGLAVDAQGNVIVADR 159
Query: 164 NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
NH ++ G+V G + A + P +A+ +IV+D +N +++
Sbjct: 160 QNHTIRKISPAGQVTTIAGDGTAGYADGTGTAAKFSSPWKLAIDPLGNIIVADRDNFKIR 219
Query: 224 IFDVNGRVITSFGS-EGSEEG---QLKF--PRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
+G V T GS G +G KF P V D QG I V D+ +RI+ +P G
Sbjct: 220 KIAPDGAVTTLAGSTAGFADGTGSAAKFMQPLDVVADAQGNIYVADNTAHRIRKVSPSGT 279
Query: 278 FLRAFGCWGSG-------DGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
G +G +F+ G+ V GNI+V DR NHRI+
Sbjct: 280 VTTLAGDGTAGYLDATGVQAKFRNPSGLTVDQQGNIIVADRLNHRIR 326
>gi|260805620|ref|XP_002597684.1| hypothetical protein BRAFLDRAFT_217408 [Branchiostoma floridae]
gi|229282951|gb|EEN53696.1| hypothetical protein BRAFLDRAFT_217408 [Branchiostoma floridae]
Length = 209
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 15/218 (6%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+AVG I V+D H + + G +V +FG G G+L HP I V ++ ++V D
Sbjct: 3 VAVGGKGGIFVSDFDTHFIYKYDEAGRYVRRFGGPGRSVGKLGHPEGICVDSSGHIMVVD 62
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
+N RV ++ G F + G+L +AVS N++ V+D R+
Sbjct: 63 QDNQRVVMYTGRGLYFGDE-----------PGTGKLRGARGVAVSPDNKIWVADRAKSRL 111
Query: 223 QIFDVNGRVITSF----GSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
Q++ + G + F G + P VAVD +G I V D + I + G++
Sbjct: 112 QVYSMEGAHLYQFPQATGLGYPSKRPSDTPMFVAVDGKGDIFVSDFDTHFIYKYDEAGRY 171
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+ FG G G+ EG+ V S+G ++V D++N R+
Sbjct: 172 VMRFGGPGRSVGKLGHPEGICVDSSGQLIVVDKDNQRV 209
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 16/196 (8%)
Query: 34 QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP---HFDLKT 90
+Y + R + G G G P GI V I+V D N RV + +F +
Sbjct: 23 KYDEAGRYVRRFGGPGRSVGKLGHPEGICVDSSGHIMVVDQDNQRVVMYTGRGLYFGDEP 82
Query: 91 NCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKF---GSMGNKAGQL-EH 146
L RG+AV PDN I VAD + R+QV+ +G + +F +G + + +
Sbjct: 83 GTGKL--RGARGVAVSPDNKIWVADRAKSRLQVYSMEGAHLYQFPQATGLGYPSKRPSDT 140
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
P ++AV + VSD + H + +D GR +V +FG G G+L HP I V
Sbjct: 141 PMFVAVDGKGDIFVSDFDTHFIYKYDEAGR-------YVMRFGGPGRSVGKLGHPEGICV 193
Query: 207 SNTNRVIVSDSNNHRV 222
++ ++IV D +N RV
Sbjct: 194 DSSGQLIVVDKDNQRV 209
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 9/171 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GI V I+V D N RV ++ G + G G+L +AVS N++
Sbjct: 47 PEGICVDSSGHIMVVDQDNQRVVMYTGRGLYFGD----EPGTGKLRGARGVAVSPDNKIW 102
Query: 160 VSDSNNHRVQIFDVNG-RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
V+D R+Q++ + G ++Q F G + P ++AV + VSD +
Sbjct: 103 VADRAKSRLQVYSMEGAHLYQ----FPQATGLGYPSKRPSDTPMFVAVDGKGDIFVSDFD 158
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
H + +D GR + FG G G+L P G+ VD G + V D N R+
Sbjct: 159 THFIYKYDEAGRYVMRFGGPGRSVGKLGHPEGICVDSSGQLIVVDKDNQRV 209
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
++AV + VSD + H + +D GR + FG G G+L P G+ VD G+I V
Sbjct: 2 FVAVGGKGGIFVSDFDTHFIYKYDEAGRYVRRFGGPGRSVGKLGHPEGICVDSSGHIMVV 61
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D N R+ ++T G + FG G G+ +G GVAV + I V DR R+QV+
Sbjct: 62 DQDNQRVVMYTGRGLY---FGDE-PGTGKLRGARGVAVSPDNKIWVADRAKSRLQVY 114
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 82/175 (46%), Gaps = 15/175 (8%)
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 208
++AV + VSD + H + +D GR +V +FG G G+L HP I V +
Sbjct: 2 FVAVGGKGGIFVSDFDTHFIYKYDEAGR-------YVRRFGGPGRSVGKLGHPEGICVDS 54
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
+ ++V D +N RV ++ G FG E G+L+ RGVAV I V D +R
Sbjct: 55 SGHIMVVDQDNQRVVMYTGRG---LYFGDE-PGTGKLRGARGVAVSPDNKIWVADRAKSR 110
Query: 269 IQIFTPDG----QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+Q+++ +G QF +A G VAV G+I V D + H I +
Sbjct: 111 LQVYSMEGAHLYQFPQATGLGYPSKRPSDTPMFVAVDGKGDIFVSDFDTHFIYKY 165
>gi|260819576|ref|XP_002605112.1| hypothetical protein BRAFLDRAFT_84218 [Branchiostoma floridae]
gi|229290443|gb|EEN61122.1| hypothetical protein BRAFLDRAFT_84218 [Branchiostoma floridae]
Length = 384
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 130/286 (45%), Gaps = 43/286 (15%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK-TNCVFLAFTWPRGI 103
+G +GS PG F PRG+AV +N I VAD N RVQV D+K + P G
Sbjct: 128 LGEKGSGPGEFENPRGVAVSANNEIFVADRFNRRVQV----HDIKGLHLRQFPTVTPGGY 183
Query: 104 AVGPDNS---------IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
V P++ IV +N V + DG + K + IAV+
Sbjct: 184 LVAPEDVSIDGEGNLWIVGKYGTNSVVVQYSRDGLPLKKI-----PVRTVSFSQGIAVNR 238
Query: 155 TN-RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
N RV+V+D V +F +G + + ++G + G +EHP Y+ + ++
Sbjct: 239 KNGRVLVTDGQFGEVLMFRPDGSLER----------TLGRQEG-MEHPWYVTTNTRGDIL 287
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
VSD + + V ++D +G + FG G + P G+ D G + V DSGN R+++ T
Sbjct: 288 VSDYDTNYVYVYDQSGVFLNKFG------GHFRHPEGLCTDRDGNVIVADSGNRRVEVLT 341
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G +R G+G G+ GVAV G ++V + + +F
Sbjct: 342 SRGDHVRYV---GAGLGK---PSGVAVGPTGQLVVTYGLQNMVAIF 381
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDG 290
++ G +GS G+ + PRGVAV I V D N R+Q+ G LR F G G
Sbjct: 124 MVILLGEKGSGPGEFENPRGVAVSANNEIFVADRFNRRVQVHDIKGLHLRQFPTVTPG-G 182
Query: 291 EFKGLEGVAVMSNGNILVCDR 311
E V++ GN+ + +
Sbjct: 183 YLVAPEDVSIDGEGNLWIVGK 203
>gi|431807572|ref|YP_007234470.1| hypothetical protein BPP43_04715 [Brachyspira pilosicoli P43/6/78]
gi|430780931|gb|AGA66215.1| tetratricopeptide repeat-containing protein [Brachyspira pilosicoli
P43/6/78]
Length = 688
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 110/245 (44%), Gaps = 34/245 (13%)
Query: 87 DLKTNCVFLA-FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG---------- 135
+ TN FL P I + D ++ V D S+ ++ F +G + K
Sbjct: 122 NFSTNANFLKNINQPIQIEMAEDGTLYVLDYSDSSLKQFDVNGNLIRKISNGKRLEEQQN 181
Query: 136 SMGNKAGQ----------LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFV 185
S KA Q LE+P + N + ++ N R +IF + ++G ++
Sbjct: 182 SWWRKAIQFVTRVYPYEKLENPRGFTIDNDGYIYIA--NTKRDKIFK-----YDNNGNYI 234
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL 245
G+ G GQL P + N R+ VSD+ N+R+ +FDVNG + SFG G +G+
Sbjct: 235 TNIGNTGISNGQLLGPSSLYADNGGRLYVSDTGNNRIVVFDVNGNYLDSFGKMGENDGEF 294
Query: 246 KFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
P G+ VD+ YI V D GN R+Q F +G ++ F G++ S+GN
Sbjct: 295 FSPAGIVVDN-NYIYVADMGNKRVQKFDLNGNYISTIKH-----ELFNEPRGLSFASDGN 348
Query: 306 ILVCD 310
+ + D
Sbjct: 349 LFIAD 353
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 14/207 (6%)
Query: 126 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ--SDGT 183
S+ ++ F + N + P I ++ + V D ++ ++ FDVNG + + S+G
Sbjct: 115 SNFIYLKNFSTNANFLKNINQPIQIEMAEDGTLYVLDYSDSSLKQFDVNGNLIRKISNGK 174
Query: 184 -FVGKFGSMGNKAGQ----------LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
+ S KA Q LE+P + N + ++++ ++ +D NG I
Sbjct: 175 RLEEQQNSWWRKAIQFVTRVYPYEKLENPRGFTIDNDGYIYIANTKRDKIFKYDNNGNYI 234
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
T+ G+ G GQL P + D+ G + V D+GNNRI +F +G +L +FG G DGEF
Sbjct: 235 TNIGNTGISNGQLLGPSSLYADNGGRLYVSDTGNNRIVVFDVNGNYLDSFGKMGENDGEF 294
Query: 293 KGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ V+ N I V D N R+Q F
Sbjct: 295 FSPAGI-VVDNNYIYVADMGNKRVQKF 320
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----AFTWPR 101
G G G F P GI V +N I VAD N RVQ FDL N + F PR
Sbjct: 285 GKMGENDGEFFSPAGIVVD-NNYIYVADMGNKRVQ----KFDLNGNYISTIKHELFNEPR 339
Query: 102 GIAVGPDNSIVVADSS 117
G++ D ++ +AD S
Sbjct: 340 GLSFASDGNLFIADGS 355
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 21/143 (14%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--------- 95
IG+ G G P + + V+D+ N+R+ V FD+ N +
Sbjct: 237 IGNTGISNGQLLGPSSLYADNGGRLYVSDTGNNRIVV----FDVNGNYLDSFGKMGENDG 292
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GI V +N I VAD N RVQ F +G ++ K P ++ ++
Sbjct: 293 EFFSPAGIVVD-NNYIYVADMGNKRVQKFDLNGNYISTI-----KHELFNEPRGLSFASD 346
Query: 156 NRVIVSDSNNHRVQIFDVNGRVF 178
+ ++D + RV +D+N +F
Sbjct: 347 GNLFIADGS--RVYYYDINNDIF 367
>gi|260806410|ref|XP_002598077.1| hypothetical protein BRAFLDRAFT_85706 [Branchiostoma floridae]
gi|229283348|gb|EEN54089.1| hypothetical protein BRAFLDRAFT_85706 [Branchiostoma floridae]
Length = 632
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 134/296 (45%), Gaps = 40/296 (13%)
Query: 34 QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV 93
Q Q +R+ F G F P G+ + I VAD N R+QV F L+ V
Sbjct: 364 QTHQLQRMTFGAGQ-------FDIPCGVTASDEGEIFVADRWNQRIQV----FTLQGTFV 412
Query: 94 FLAFTWPRG-IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
T G + PD+ V D + ++ G+ ++ + G + Y+
Sbjct: 413 RQFPTVVSGEKKMVPDD--VAMDGEGN---LWVVGGSCFAEYTNQGRVLSKF----YLQN 463
Query: 153 SNTNRVIVSDSNNHRVQIFDVNG---------RVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
+ R + D+ + + I G VF+ DG V ++G + G + +P Y
Sbjct: 464 AKCVRGVAVDTRRNHILITQTTGVWPDMQGEVLVFRPDGKLV---RTVGQQQG-MRYPQY 519
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
I V ++V+D+ NH V +++ +G+ + F EGS EGQL PRG+ D G I V D
Sbjct: 520 ITVDGEGNILVADTRNHCVYVYNQDGQFLFQFLGEGSGEGQLLGPRGICTDRTGNIIVAD 579
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
GN+R+++F G+F + + KG + VA+ + G ++V D ++ + +F
Sbjct: 580 FGNSRVEMFDKTGKFFKHIAT------DMKGPQAVAMATRGQLVVTDAGSNTVSIF 629
>gi|290971766|ref|XP_002668650.1| predicted protein [Naegleria gruberi]
gi|284082136|gb|EFC35906.1| predicted protein [Naegleria gruberi]
Length = 728
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 129/305 (42%), Gaps = 47/305 (15%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC--------------VFLAFTWPRGI 103
P + V +N + +AD NHR++ + ++ T P G+
Sbjct: 13 PESVFVSSNNEVYIADYGNHRIRKILENGNIVTIAGNGTAGFSGDNGIATKAQLNGPVGV 72
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFV-----GKFGSMGNK----AGQLEHPHYIAVSN 154
V +N + +AD NHR++ +G V G G G+ +L P + VS+
Sbjct: 73 FVSSNNEVYIADYDNHRIRKILENGNIVIIAGKGTAGFSGDNGLATKEKLNFPRCVFVSS 132
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA----GQLEHPHYIAVSNTN 210
N V ++D NHR++ NG + G G +G G+ QL P + VS+ N
Sbjct: 133 NNEVYIADQINHRIRKILENGNIVTIAGN--GPYGFCGDNGLATNAQLNSPAGVFVSSNN 190
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEG---------SEEGQLKFPRGVAVDDQGYISV 261
+ ++D +NHR++ NG ++T G + + +L FPR V V + +
Sbjct: 191 EIYIADYDNHRIRKILENGNIVTIAGKGTAGFSGDNGLATKEKLNFPRCVFVSSNNEVYI 250
Query: 262 GDSGNNRIQIFTPDGQFLRAFG------CWGSG---DGEFKGLEGVAVMSNGNILVCDRE 312
D N+RI+ +G + G C +G + + GV V SN I + +
Sbjct: 251 ADQINHRIRKILENGNIVTIAGNGPYGFCGDNGLATNAQLNSPAGVFVSSNNEIYIAEYG 310
Query: 313 NHRIQ 317
NHRI+
Sbjct: 311 NHRIR 315
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 117/276 (42%), Gaps = 45/276 (16%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------------------FTW 99
P G+ V +N + +AD NHR++ + N V +A +
Sbjct: 69 PVGVFVSSNNEVYIADYDNHRIRKILEN----GNIVIIAGKGTAGFSGDNGLATKEKLNF 124
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV-----GKFGSMGNKA----GQLEHPHYI 150
PR + V +N + +AD NHR++ +G V G +G G+ QL P +
Sbjct: 125 PRCVFVSSNNEVYIADQINHRIRKILENGNIVTIAGNGPYGFCGDNGLATNAQLNSPAGV 184
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ--LEHPHYIAVSN 208
VS+ N + ++D +NHR++ NG + G F A + L P + VS+
Sbjct: 185 FVSSNNEIYIADYDNHRIRKILENGNIVTIAGKGTAGFSGDNGLATKEKLNFPRCVFVSS 244
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVIT-----SFGSEG----SEEGQLKFPRGVAVDDQGYI 259
N V ++D NHR++ NG ++T +G G + QL P GV V I
Sbjct: 245 NNEVYIADQINHRIRKILENGNIVTIAGNGPYGFCGDNGLATNAQLNSPAGVFVSSNNEI 304
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFG---CWGSGDGEF 292
+ + GN+RI+ +G + G SGD F
Sbjct: 305 YIAEYGNHRIRKILENGNIVTVAGNGTAGFSGDSPF 340
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 105/249 (42%), Gaps = 49/249 (19%)
Query: 19 LLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHR 78
++++G G G + + K +L F PR + V +N + +AD NHR
Sbjct: 100 VIIAGKGTAGFSGDNGLATKEKLNF--------------PRCVFVSSNNEVYIADQINHR 145
Query: 79 VQVCFPHFD-----------------LKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRV 121
++ + + L TN P G+ V +N I +AD NHR+
Sbjct: 146 IRKILENGNIVTIAGNGPYGFCGDNGLATNA---QLNSPAGVFVSSNNEIYIADYDNHRI 202
Query: 122 QVFQSDGTFV-----GKFGSMGNK----AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 172
+ +G V G G G+ +L P + VS+ N V ++D NHR++
Sbjct: 203 RKILENGNIVTIAGKGTAGFSGDNGLATKEKLNFPRCVFVSSNNEVYIADQINHRIRKIL 262
Query: 173 VNGRVFQSDGTFVGKFGSMGNKA----GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
NG + G G +G G+ QL P + VS+ N + +++ NHR++ N
Sbjct: 263 ENGNIVTIAGN--GPYGFCGDNGLATNAQLNSPAGVFVSSNNEIYIAEYGNHRIRKILEN 320
Query: 229 GRVITSFGS 237
G ++T G+
Sbjct: 321 GNIVTVAGN 329
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 22/198 (11%)
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG---SMGNKAGQ 197
+ QL P + VS+ N V ++D NHR++ NG + G F + KA Q
Sbjct: 7 SAQLYSPESVFVSSNNEVYIADYGNHRIRKILENGNIVTIAGNGTAGFSGDNGIATKA-Q 65
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR--VITSFGSEG-------SEEGQLKFP 248
L P + VS+ N V ++D +NHR++ NG +I G+ G + + +L FP
Sbjct: 66 LNGPVGVFVSSNNEVYIADYDNHRIRKILENGNIVIIAGKGTAGFSGDNGLATKEKLNFP 125
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG------CWGSG---DGEFKGLEGVA 299
R V V + + D N+RI+ +G + G C +G + + GV
Sbjct: 126 RCVFVSSNNEVYIADQINHRIRKILENGNIVTIAGNGPYGFCGDNGLATNAQLNSPAGVF 185
Query: 300 VMSNGNILVCDRENHRIQ 317
V SN I + D +NHRI+
Sbjct: 186 VSSNNEIYIADYDNHRIR 203
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 34/174 (19%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------------------FTW 99
P G+ V +N I +AD NHR++ + N V +A +
Sbjct: 181 PAGVFVSSNNEIYIADYDNHRIRKILEN----GNIVTIAGKGTAGFSGDNGLATKEKLNF 236
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV-----GKFGSMGNKA----GQLEHPHYI 150
PR + V +N + +AD NHR++ +G V G +G G+ QL P +
Sbjct: 237 PRCVFVSSNNEVYIADQINHRIRKILENGNIVTIAGNGPYGFCGDNGLATNAQLNSPAGV 296
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE-HPHY 203
VS+ N + +++ NHR++ NG + G G G G+ + +PH+
Sbjct: 297 FVSSNNEIYIAEYGNHRIRKILENGNIVTVAGN--GTAGFSGDSPFDIRMYPHF 348
>gi|260785674|ref|XP_002587885.1| hypothetical protein BRAFLDRAFT_87272 [Branchiostoma floridae]
gi|229273040|gb|EEN43896.1| hypothetical protein BRAFLDRAFT_87272 [Branchiostoma floridae]
Length = 574
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 82/143 (57%), Gaps = 11/143 (7%)
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF+ DGT V ++G + G ++HP YI V ++VSD N V +++ +GR + FG
Sbjct: 109 VFRPDGTLVR---TVGQQQG-MKHPWYITVDGEGNILVSDCENCCVYVYNEDGRFLFQFG 164
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
EGS EGQL PRG+ D G I V D GN+R+++F G+FL+ + D E+ E
Sbjct: 165 GEGSGEGQLDRPRGICTDSAGNIIVADKGNSRVEMFDKTGKFLKHI----TTDMEWP--E 218
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
V ++ G ++V D N+ I VF
Sbjct: 219 AVTMVPQGQLVVTDM-NNTISVF 240
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 117/271 (43%), Gaps = 62/271 (22%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G+ V + I VAD N R+QVF GTFV +F ++ + +++ P+ +A+
Sbjct: 315 FIDPVGVTVSDEGEIFVADYGNRRIQVFTLQGTFVRQFPTVVSGRQKMD-PYDVAMDGEG 373
Query: 157 RV------------------------------------IVSDSNNHRVQIFDVNGR---- 176
+ + D+ + + I G
Sbjct: 374 NLWVVGGKGSADFAMKYNKQGRVLRKFGLQNAAGWMKGVAVDTRRNHILITQTTGDMHNP 433
Query: 177 -----VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
VF+ DGT VG + + ++HP YI V ++VSD N V +++ +G+
Sbjct: 434 HGAVLVFRPDGTLVG----IVRQQQGMKHPWYITVDGEGNILVSDWVNSCVYVYNEDGQF 489
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
+ FG EGS EGQL PRG+ D G I V D N R+++F +FL+
Sbjct: 490 LFQFGGEGSGEGQLNDPRGICTDRAGNIIVADGLNRRVEMFDRTRKFLKHIT-------- 541
Query: 292 FKGLE---GVAVMSNGNILVCDRENHRIQVF 319
G++ VA+ G ++V D +N+ + +F
Sbjct: 542 -TGMQYPCAVAMAPQGQLVVTDVKNYSVSIF 571
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 25/183 (13%)
Query: 99 WPRGIAVGPD-NSIVVADSSNH------RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
W RG V N I++ ++ V VF+ DGT V ++G + G ++HP YI
Sbjct: 78 WGRGDTVDTRRNHILITQTTGDWPDQHGEVLVFRPDGTLVR---TVGQQQG-MKHPWYIT 133
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V ++VSD N V +++ DG F+ +FG G+ GQL+ P I +
Sbjct: 134 VDGEGNILVSDCENCCVYVYN-------EDGRFLFQFGGEGSGEGQLDRPRGICTDSAGN 186
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
+IV+D N RV++FD G+ + ++ +++P V + QG + V D NN I +
Sbjct: 187 IIVADKGNSRVEMFDKTGKFLKHITTD------MEWPEAVTMVPQGQLVVTDM-NNTISV 239
Query: 272 FTP 274
F P
Sbjct: 240 FQP 242
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 28/231 (12%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P I V + +I+V+D N V V+ DG F+ +FG G+ GQL+ P I + +I
Sbjct: 129 PWYITVDGEGNILVSDCENCCVYVYNEDGRFLFQFGGEGSGEGQLDRPRGICTDSAGNII 188
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D N RV++FD G+ + T +E P + + +++V+D NN
Sbjct: 189 VADKGNSRVEMFDKTGKFLKHITT-------------DMEWPEAVTMVPQGQLVVTDMNN 235
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQ----LKFPRGVAVDDQGYISVGDS-------GNNR 268
+ +F + G + L P ++ + + GN R
Sbjct: 236 -TISVFQPTDTTVPVLGHVRVQSLPSMPILVAPATISAAPAPIPAAPATRDIHYHHGNQR 294
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ P FG GSG G+F GV V G I V D N RIQVF
Sbjct: 295 QREHQPQKIL---FGGEGSGSGKFIDPVGVTVSDEGEIFVADYGNRRIQVF 342
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 116/280 (41%), Gaps = 16/280 (5%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + R F+ G GS G PRGI +I+VAD N RV++ F +
Sbjct: 153 YNEDGRFLFQFGGEGSGEGQLDRPRGICTDSAGNIIVADKGNSRVEM-FDKTGKFLKHIT 211
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ----LEHPHYI 150
WP + + P +VV D +N + VFQ T V G + ++ L P I
Sbjct: 212 TDMEWPEAVTMVPQGQLVVTDMNN-TISVFQPTDTTVPVLGHVRVQSLPSMPILVAPATI 270
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
+ + + + + R Q FG G+ +G+ P + VS+
Sbjct: 271 SAAPAPIPAAPATRDIHYHHGNQRQREHQPQKIL---FGGEGSGSGKFIDPVGVTVSDEG 327
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISV--GDSGNNR 268
+ V+D N R+Q+F + G + F + S ++ P VA+D +G + V G +
Sbjct: 328 EIFVADYGNRRIQVFTLQGTFVRQFPTVVSGRQKMD-PYDVAMDGEGNLWVVGGKGSADF 386
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
+ G+ LR FG + ++GVAV + N ++
Sbjct: 387 AMKYNKQGRVLRKFGLQNAA----GWMKGVAVDTRRNHIL 422
>gi|443684722|gb|ELT88579.1| hypothetical protein CAPTEDRAFT_46844, partial [Capitella teleta]
Length = 131
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 7/134 (5%)
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
P+ +AV+ N +I++D H + +FD + +S GK GS G A Q + P+Y+A
Sbjct: 1 PYGVAVTTANHIIITDIGKHCIYVFDAEYKQIKS----FGKRGSRG--AKQFKSPYYVAT 54
Query: 207 SNTNRVIVSDSNNHRVQIFDV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSG 265
+N N +IVSD NH +++F N G+ G++ GQ P G+ D G I V D
Sbjct: 55 NNDNDIIVSDYGNHCIKVFQFSNLSCKLIIGNNGNQPGQFMHPMGICADKFGNIFVADRD 114
Query: 266 NNRIQIFTPDGQFL 279
N+RIQ+F P GQFL
Sbjct: 115 NHRIQMFDPKGQFL 128
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 7/136 (5%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNK-AGQLEHPHYIAVSNTNRV 158
P G+AV N I++ D H + VF ++ + FG G++ A Q + P+Y+A +N N +
Sbjct: 1 PYGVAVTTANHIIITDIGKHCIYVFDAEYKQIKSFGKRGSRGAKQFKSPYYVATNNDNDI 60
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
IVSD NH +++F S+ + G+ GN+ GQ HP I + V+D +
Sbjct: 61 IVSDYGNHCIKVFQF------SNLSCKLIIGNNGNQPGQFMHPMGICADKFGNIFVADRD 114
Query: 219 NHRVQIFDVNGRVITS 234
NHR+Q+FD G+ + +
Sbjct: 115 NHRIQMFDPKGQFLAT 130
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSE-EGQLKFPRGVAVDDQGYI 259
P+ +AV+ N +I++D H + +FD + I SFG GS Q K P VA ++ I
Sbjct: 1 PYGVAVTTANHIIITDIGKHCIYVFDAEYKQIKSFGKRGSRGAKQFKSPYYVATNNDNDI 60
Query: 260 SVGDSGNNRIQIFTPDGQFLRAF-GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
V D GN+ I++F + G G+ G+F G+ GNI V DR+NHRIQ+
Sbjct: 61 IVSDYGNHCIKVFQFSNLSCKLIIGNNGNQPGQFMHPMGICADKFGNIFVADRDNHRIQM 120
Query: 319 F 319
F
Sbjct: 121 F 121
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV----------FLAFTWPRGIAVGP 107
P G+AV N I++ D H + V FD + + F P +A
Sbjct: 1 PYGVAVTTANHIIITDIGKHCIYV----FDAEYKQIKSFGKRGSRGAKQFKSPYYVATNN 56
Query: 108 DNSIVVADSSNHRVQVFQ-SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
DN I+V+D NH ++VFQ S+ + G+ GN+ GQ HP I + V+D +NH
Sbjct: 57 DNDIIVSDYGNHCIKVFQFSNLSCKLIIGNNGNQPGQFMHPMGICADKFGNIFVADRDNH 116
Query: 167 RVQIFDVNGRVFQS 180
R+Q+FD G+ +
Sbjct: 117 RIQMFDPKGQFLAT 130
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------A 96
K GSRG++ F P +A DN I+V+D NH ++V F +L +
Sbjct: 37 KRGSRGAKQ--FKSPYYVATNNDNDIIVSDYGNHCIKV-FQFSNLSCKLIIGNNGNQPGQ 93
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVG 132
F P GI +I VAD NHR+Q+F G F+
Sbjct: 94 FMHPMGICADKFGNIFVADRDNHRIQMFDPKGQFLA 129
>gi|260792410|ref|XP_002591208.1| hypothetical protein BRAFLDRAFT_247532 [Branchiostoma floridae]
gi|229276411|gb|EEN47219.1| hypothetical protein BRAFLDRAFT_247532 [Branchiostoma floridae]
Length = 214
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 105/230 (45%), Gaps = 34/230 (14%)
Query: 60 GIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGI-AVGPDNSIVVADSSN 118
G+AV DN I VAD + R+QV +L + +PRG +G + + D N
Sbjct: 1 GVAVSSDNKIWVADQNKARLQV------YNMEGAYL-YQFPRGAPGLGQSYTGMAVDLRN 53
Query: 119 HRVQVFQSDGTFVGKFGSMGNKAGQL----------EHPHYIAVSNTNRVIVSDSNNHRV 168
+R+ V SDG G N G+L + P Y+AV VSD + H +
Sbjct: 54 NRILVTWSDGMKGGM--QAFNPDGKLLWSDVGRAWMKAPKYVAVDREGNSFVSDYSTHVI 111
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQL------EHPHYIAVSNTNRVIVSDSNNHRV 222
+D GR +V KFG G A Q + P Y+AV VSD H +
Sbjct: 112 YKYDDTGR-------YVSKFGGPGLSARQEARTIESDAPKYVAVDREGNSFVSDYGTHSI 164
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ-GYISVGDSGNNRIQI 271
+D +GR ++ FG G G+L P+G+ VD Q G+I V DS N R+ +
Sbjct: 165 YKYDASGRYVSKFGGPGLSGGRLNRPQGICVDSQSGHIVVVDSNNQRVVV 214
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 21/226 (9%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
G+AV DN I VAD + R+QV+ +G ++ +F GQ + + N NR++V+
Sbjct: 1 GVAVSSDNKIWVADQNKARLQVYNMEGAYLYQFPRGAPGLGQSYTGMAVDLRN-NRILVT 59
Query: 162 DSNNHR--VQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
S+ + +Q F+ +G++ SD VG+ ++ P Y+AV VSD +
Sbjct: 60 WSDGMKGGMQAFNPDGKLLWSD---VGR--------AWMKAPKYVAVDREGNSFVSDYST 108
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLK------FPRGVAVDDQGYISVGDSGNNRIQIFT 273
H + +D GR ++ FG G Q P+ VAVD +G V D G + I +
Sbjct: 109 HVIYKYDDTGRYVSKFGGPGLSARQEARTIESDAPKYVAVDREGNSFVSDYGTHSIYKYD 168
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMS-NGNILVCDRENHRIQV 318
G+++ FG G G +G+ V S +G+I+V D N R+ V
Sbjct: 169 ASGRYVSKFGGPGLSGGRLNRPQGICVDSQSGHIVVVDSNNQRVVV 214
>gi|156349332|ref|XP_001622015.1| hypothetical protein NEMVEDRAFT_v1g221282 [Nematostella vectensis]
gi|156208403|gb|EDO29915.1| predicted protein [Nematostella vectensis]
Length = 854
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 111/229 (48%), Gaps = 16/229 (6%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH-PHYIAVSNT 155
F RGI V N I+V+D N RVQVF + G F+ +FG G A + + P +AV +
Sbjct: 595 FKSVRGITVDLTNRIIVSDRDNARVQVFDASGNFLFQFGRKGGAAREFKCGPCDVAVDSA 654
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM--GNKAGQLEHPHYIAVSNTNRVI 213
RVI D + V +FD S G FV + G+ GQ +AV + +RV+
Sbjct: 655 GRVIACDWSGDGVLVFD-------SRGNFVSRLRPFEEGDGLGQFCR---LAVDHHDRVL 704
Query: 214 VSDSNNHRVQIFDV-NGRVITSFGSEGSE-EGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
VSD +N +V +F +G +T + + E +G L P G+ V+ +G + V + + +Q+
Sbjct: 705 VSDYHNRKVHVFARDDGSQVTCYTAVTDEGDGLLNAPSGITVNSKGEVIVALANSGVLQV 764
Query: 272 FTPDGQFLRAFGCWGSG-DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D +R F G +G + +A ++ NIL D N I V
Sbjct: 765 LDSDMNLIRQFAINEKGTNGNLFTTDALACDASDNILAIDSYNDYILVL 813
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 125/283 (44%), Gaps = 32/283 (11%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF------- 94
Q G+ GS G F RGI V N I+V+D N RVQV FD N +F
Sbjct: 582 QLTFGTSGSNSGQFKSVRGITVDLTNRIIVSDRDNARVQV----FDASGNFLFQFGRKGG 637
Query: 95 --LAFTW-PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM--GNKAGQLEHPHY 149
F P +AV ++ D S V VF S G FV + G+ GQ
Sbjct: 638 AAREFKCGPCDVAVDSAGRVIACDWSGDGVLVFDSRGNFVSRLRPFEEGDGLGQFCR--- 694
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA-GQLEHPHYIAVSN 208
+AV + +RV+VSD +N +V +F + DG+ V + ++ ++ G L P I V++
Sbjct: 695 LAVDHHDRVLVSDYHNRKVHVF------ARDDGSQVTCYTAVTDEGDGLLNAPSGITVNS 748
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFG-SEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
VIV+ +N+ +Q+ D + +I F +E G L +A D I DS N+
Sbjct: 749 KGEVIVALANSGVLQVLDSDMNLIRQFAINEKGTNGNLFTTDALACDASDNILAIDSYND 808
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
I + DG L G G+AV + G +++ D
Sbjct: 809 YILVLGQDGSVL-----ARCAMGNLNSPCGIAVDAMGRVVISD 846
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 71/136 (52%), Gaps = 8/136 (5%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG+ G+ +GQ + I V TNR+IVSD +N RVQ+FD +G + FG +G + K
Sbjct: 585 FGTSGSNSGQFKSVRGITVDLTNRIIVSDRDNARVQVFDASGNFLFQFGRKGGAAREFKC 644
Query: 248 -PRGVAVDDQGYISVGDSGNNRIQIFTPDGQF---LRAFGCWGSGDGEFKGLEGVAVMSN 303
P VAVD G + D + + +F G F LR F G G G+F L AV +
Sbjct: 645 GPCDVAVDSAGRVIACDWSGDGVLVFDSRGNFVSRLRPFE-EGDGLGQFCRL---AVDHH 700
Query: 304 GNILVCDRENHRIQVF 319
+LV D N ++ VF
Sbjct: 701 DRVLVSDYHNRKVHVF 716
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+FG+ GS GQ K RG+ VD I V D N R+Q+F G FL FG G EFK
Sbjct: 584 TFGTSGSNSGQFKSVRGITVDLTNRIIVSDRDNARVQVFDASGNFLFQFGRKGGAAREFK 643
Query: 294 -GLEGVAVMSNGNILVCDRENHRIQVF 319
G VAV S G ++ CD + VF
Sbjct: 644 CGPCDVAVDSAGRVIACDWSGDGVLVF 670
>gi|260795079|ref|XP_002592534.1| hypothetical protein BRAFLDRAFT_69051 [Branchiostoma floridae]
gi|229277754|gb|EEN48545.1| hypothetical protein BRAFLDRAFT_69051 [Branchiostoma floridae]
Length = 263
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 109/227 (48%), Gaps = 27/227 (11%)
Query: 106 GPDNSIVVADSSNH-----RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
GPD + V S+ H R+ V ++ F +FG+ G K G+ + P + ++ ++V
Sbjct: 49 GPDVNTCVKFSAEHLHENFRLGVLITESVF--QFGAKGTKDGEFDSPFRVVTNSQGEILV 106
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+D+ N R+Q+FD S GTF K+ S + + P +AV+ + ++D N
Sbjct: 107 ADNGNKRLQMFD-------SKGTF--KWKSEKEEGDKFLKPVDVAVTPDGNIYITDVANK 157
Query: 221 RV-----QIFDVNGRVITSFGSE---GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V ++FD G + FG E ++ G+ P G+ VD + I V D N R+ +F
Sbjct: 158 CVKKFDPKVFDSEGLFLFKFGGEVGADADRGKHSMPAGLCVDPRDNIIVADIHNGRVDLF 217
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
PDG FLR G GVA+ +G ++V D + I+++
Sbjct: 218 RPDGSFLRHIATASDG---LLSPYGVAMTPDGRVVVTDVSDCAIKIY 261
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 31/157 (19%)
Query: 39 RRLQ-------FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK-- 89
+RLQ FK S E F P +AV PD +I + D +N C FD K
Sbjct: 112 KRLQMFDSKGTFKWKSEKEEGDKFLKPVDVAVTPDGNIYITDVANK----CVKKFDPKVF 167
Query: 90 -TNCVFL--------------AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKF 134
+ +FL + P G+ V P ++I+VAD N RV +F+ DG+F+
Sbjct: 168 DSEGLFLFKFGGEVGADADRGKHSMPAGLCVDPRDNIIVADIHNGRVDLFRPDGSFLRHI 227
Query: 135 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
+ + L P+ +A++ RV+V+D ++ ++I+
Sbjct: 228 ATASD---GLLSPYGVAMTPDGRVVVTDVSDCAIKIY 261
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 43 FKIGSR---GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH--FDLKTNCVFLAF 97
FK G ++ G + P G+ V P ++I+VAD N RV + P F
Sbjct: 175 FKFGGEVGADADRGKHSMPAGLCVDPRDNIIVADIHNGRVDLFRPDGSFLRHIATASDGL 234
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P G+A+ PD +VV D S+ +++++
Sbjct: 235 LSPYGVAMTPDGRVVVTDVSDCAIKIYK 262
>gi|290992574|ref|XP_002678909.1| predicted protein [Naegleria gruberi]
gi|284092523|gb|EFC46165.1| predicted protein [Naegleria gruberi]
Length = 1626
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 62/236 (26%), Positives = 114/236 (48%), Gaps = 30/236 (12%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF---LAFTWPRGIAVGPDNSIVVA 114
P G+AV + ++D+ +R+ C + TN F + PRGI V ++ + A
Sbjct: 88 PYGVAVDSMEQVYISDTDRNRI--C----KILTNGTFRIVASANSPRGITVDSNDEVYFA 141
Query: 115 DSSNHRVQVFQSDGTFVGKFGS---------MGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
DS NHR++ DGT + G+ + QL +P+ + + + + ++D N
Sbjct: 142 DSKNHRIRKILKDGTVITIAGTKTGGYNGDNIPQTTAQLNNPYDVKIGSDGAIYIADYGN 201
Query: 166 HRV-QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 224
+R+ +I + +GT + + +L P IA+S+T V +SD+NN++++
Sbjct: 202 NRIRKIANNTITTVAGNGTIGSDSDNAEGTSAKLSGPSGIAISSTGDVYISDTNNNKIRK 261
Query: 225 FDVNGRVITSFGSEG----------SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
NG +IT+F G ++ +L PRG+A+ G + + D+ NNRI+
Sbjct: 262 LSTNG-IITTFAGTGVSGFFGDKADAKRARLSGPRGLAITASGVLYIADTNNNRIR 316
Score = 85.1 bits (209), Expect = 4e-14, Method: Composition-based stats.
Identities = 79/307 (25%), Positives = 139/307 (45%), Gaps = 50/307 (16%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNC--------------VFLAFTWPRGI 103
PRGI V ++ + ADS NHR++ + T P +
Sbjct: 127 PRGITVDSNDEVYFADSKNHRIRKILKDGTVITIAGTKTGGYNGDNIPQTTAQLNNPYDV 186
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDG-TFVGKFGSMGN-------KAGQLEHPHYIAVSNT 155
+G D +I +AD N+R++ ++ T V G++G+ + +L P IA+S+T
Sbjct: 187 KIGSDGAIYIADYGNNRIRKIANNTITTVAGNGTIGSDSDNAEGTSAKLSGPSGIAISST 246
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFV-GKFGSMGN-KAGQLEHPHYIAVSNTNRVI 213
V +SD+NN++++ NG + GT V G FG + K +L P +A++ + +
Sbjct: 247 GDVYISDTNNNKIRKLSTNGIITTFAGTGVSGFFGDKADAKRARLSGPRGLAITASGVLY 306
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEG----SEEG-----QLKFPRGVAVD-DQGYISVGD 263
++D+NN+R++ + T G++ S+ G + PRG+++D G I D
Sbjct: 307 IADTNNNRIRQVSQQNIISTFSGNDDKVYCSDAGLALGSRTPSPRGISLDPTTGDIYFAD 366
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMS-------------NGNILVCD 310
S N R+ T DG+ G+G+ F G VA + G++ D
Sbjct: 367 STNQRLSKITSDGEIELVS---GTGEANFFGENVVATTAKLNNPSGVTVDPKTGDLYFAD 423
Query: 311 RENHRIQ 317
+N+RI+
Sbjct: 424 TKNNRIR 430
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 63/287 (21%), Positives = 123/287 (42%), Gaps = 44/287 (15%)
Query: 64 GPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW--------------PRGIAVGPDN 109
GP+ + +AD+ ++R++ + + + T L W P G+AV
Sbjct: 41 GPNGDLFIADTESYRIRRIYTNGTILT---VLGRRWGYDKNVDPKTMMINPYGVAVDSME 97
Query: 110 SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 169
+ ++D+ +R+ ++GTF P I V + + V +DS NHR++
Sbjct: 98 QVYISDTDRNRICKILTNGTF--------RIVASANSPRGITVDSNDEVYFADSKNHRIR 149
Query: 170 IFDVNGRVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ---- 223
+G V GT G + ++ QL +P+ + + + + ++D N+R++
Sbjct: 150 KILKDGTVITIAGTKTGGYNGDNIPQTTAQLNNPYDVKIGSDGAIYIADYGNNRIRKIAN 209
Query: 224 --IFDVNGRVITSFGSEGSE--EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
I V G S+ +E +L P G+A+ G + + D+ NN+I+ + +G
Sbjct: 210 NTITTVAGNGTIGSDSDNAEGTSAKLSGPSGIAISSTGDVYISDTNNNKIRKLSTNGIIT 269
Query: 280 RAFGCWGSG---------DGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
G SG G G+A+ ++G + + D N+RI+
Sbjct: 270 TFAGTGVSGFFGDKADAKRARLSGPRGLAITASGVLYIADTNNNRIR 316
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 80/310 (25%), Positives = 137/310 (44%), Gaps = 56/310 (18%)
Query: 58 PRGIAVGPDN-SIVVADSSNHRVQVCFPHFDLK------------TNCVFLA--FTWPRG 102
PRGI++ P I ADS+N R+ +++ N V P G
Sbjct: 350 PRGISLDPTTGDIYFADSTNQRLSKITSDGEIELVSGTGEANFFGENVVATTAKLNNPSG 409
Query: 103 IAVGPDN-SIVVADSSNHRVQ----------VFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
+ V P + AD+ N+R++ + + T +G G + KA L P I
Sbjct: 410 VTVDPKTGDLYFADTKNNRIRKITPSKIISTIAGTQTTILGD-GELATKA-SLIAPSEII 467
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA--GQLEHPHYIAVSNT 209
+S T + +SDS +HR++ NG + GT + + G +A L+ P+ IA+++
Sbjct: 468 LSPTGEIYISDSGHHRIRKILTNGTIITYAGTGLKPYNGDGIQATCANLDTPYGIALNSD 527
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGS-EGSEEGQ--------LKFPRGVAVDDQ-GYI 259
+ ++D NN+RV+ NG ++T G+ E + G ++ P +A+D + G +
Sbjct: 528 GELFIADQNNYRVRKVFTNGTIVTIAGNGERTYNGDNILATSAAVEAPTNIALDSKSGAL 587
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF---KGLE---------GVAVMSNGNIL 307
VG S RI+ G G G G F G+E G+ ++SNG+++
Sbjct: 588 YVGSS---RIRKIDSKGVISTVAGT-GIVTGIFLYTDGIESTSANINTGGLYLLSNGDLI 643
Query: 308 VCDRENHRIQ 317
DR + I+
Sbjct: 644 FSDRSSQLIR 653
>gi|260825385|ref|XP_002607647.1| hypothetical protein BRAFLDRAFT_84664 [Branchiostoma floridae]
gi|229292995|gb|EEN63657.1| hypothetical protein BRAFLDRAFT_84664 [Branchiostoma floridae]
Length = 627
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 116/271 (42%), Gaps = 59/271 (21%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS-MGNKAGQLEHPHYIAVSNT 155
F P G+AV D+ + +AD +N R+QVF DG +V +F + + G+ P +A+
Sbjct: 365 FDGPVGVAVSQDDKLYIADLNNSRIQVFTMDGVYVREFTTTLPGGTGEKFEPCDVAIGRN 424
Query: 156 NRVIVSDSNNHRVQI--------------FDVNG-------------------------- 175
+ + V S NH VQ ++N
Sbjct: 425 DNLWVV-SKNHVVQYSREGTCLTKIDLSHVELNEYMRGIAVTLETELVIVTEQELVGKNA 483
Query: 176 ----RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
RVF+ DG + FGS +P Y+ V ++V+D ++ V + D G
Sbjct: 484 IGRLRVFKQDGLEIFTFGSYCMSLRPW-YPRYVTVDGEGNILVTDYKDYCVHVLDKEGNF 542
Query: 232 ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
FGS GS+E QL P+G+ VD G I V D G +Q+ G+F G
Sbjct: 543 RFKFGSVGSDESQLYDPQGICVDGMGNIIVADFGYGSLQMHDSQGRFQCDIG-------- 594
Query: 292 FKGLE---GVAVMSNGNILVCDRENHRIQVF 319
G+E GVAV G+++V D ++H + V+
Sbjct: 595 -SGMERPCGVAVSPGGDVVVTDYKDHTVSVW 624
>gi|47212875|emb|CAF90324.1| unnamed protein product [Tetraodon nigroviridis]
Length = 618
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 112/241 (46%), Gaps = 58/241 (24%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAV 105
GS+G G FT +G+A SI++ADS+NH
Sbjct: 418 GSKGRNKGEFTNLQGVATA-TCSILIADSNNH---------------------------- 448
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTF---------VGKFGSMGNKAGQLEHPHYIAVSNTN 156
I++AD N V +F DG F +G + +G+ G+L P ++V
Sbjct: 449 ---GDIIIADYDNKWVSIFSCDGKFKVGDPAGRALGSWAKLGS--GRLLGPKGVSVDQNG 503
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN---KAGQLEH--PHYIAVSNTNR 211
VIV D N +F VFQ G V KFGS GN AG+L PH+ AV+ N
Sbjct: 504 HVIVVD--NKACSVF-----VFQLSGKLVAKFGSRGNGIHAAGRLVGGGPHFAAVNKNNE 556
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
+IV+D +NH V++FD +G ++ + L P+G+A+ G++ V DSGN+ ++
Sbjct: 557 IIVTDFHNHSVKVFDGSGSFLSYINTSAEP---LYGPQGLALTSDGHVVVADSGNHCFKV 613
Query: 272 F 272
+
Sbjct: 614 Y 614
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 24/203 (11%)
Query: 135 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH-RVQIFDVNGR---VFQSDGTF------ 184
GS G G+ + +A + T ++++DSNNH + I D + + +F DG F
Sbjct: 418 GSKGRNKGEFTNLQGVATA-TCSILIADSNNHGDIIIADYDNKWVSIFSCDGKFKVGDPA 476
Query: 185 ---VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGS- 240
+G + +G+ G+L P ++V VIV D+ V +F ++G+++ FGS G+
Sbjct: 477 GRALGSWAKLGS--GRLLGPKGVSVDQNGHVIVVDNKACSVFVFQLSGKLVAKFGSRGNG 534
Query: 241 --EEGQL--KFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
G+L P AV+ I V D N+ +++F G FL + G +
Sbjct: 535 IHAAGRLVGGGPHFAAVNKNNEIIVTDFHNHSVKVFDGSGSFLSYIN---TSAEPLYGPQ 591
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
G+A+ S+G+++V D NH +V+
Sbjct: 592 GLALTSDGHVVVADSGNHCFKVY 614
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 14/76 (18%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT--------WPRGIAVGPDN 109
P AV +N I+V D NH V+V FD + FL++ P+G+A+ D
Sbjct: 546 PHFAAVNKNNEIIVTDFHNHSVKV----FDGSGS--FLSYINTSAEPLYGPQGLALTSDG 599
Query: 110 SIVVADSSNHRVQVFQ 125
+VVADS NH +V++
Sbjct: 600 HVVVADSGNHCFKVYR 615
>gi|156393854|ref|XP_001636542.1| predicted protein [Nematostella vectensis]
gi|156223646|gb|EDO44479.1| predicted protein [Nematostella vectensis]
Length = 105
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 65/105 (61%)
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
VI+S+ NH V++F +GR + G G +G FPRG+AVD+ G + + DS NNR+Q+
Sbjct: 1 VIISEYENHTVKVFHHHGRSFKTLGGPGIGKGLFMFPRGIAVDNDGNLLIADSLNNRVQV 60
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
T +G+F+ +FG GS G VAV G++LV ++ NHR+
Sbjct: 61 ITIEGEFVSSFGRLGSSPGYLDVPYAVAVNRRGHVLVAEKRNHRV 105
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
VI+S+ NH V++F +GR F++ G G G P IAV N ++++DS
Sbjct: 1 VIISEYENHTVKVFHHHGRSFKT-------LGGPGIGKGLFMFPRGIAVDNDGNLLIADS 53
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
N+RVQ+ + G ++SFG GS G L P VAV+ +G++ V + N+R+
Sbjct: 54 LNNRVQVITIEGEFVSSFGRLGSSPGYLDVPYAVAVNRRGHVLVAEKRNHRV 105
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
Query: 69 IVVADSSNHRVQVCFPH-FDLKT----NCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQV 123
+++++ NH V+V H KT F +PRGIAV D ++++ADS N+RVQV
Sbjct: 1 VIISEYENHTVKVFHHHGRSFKTLGGPGIGKGLFMFPRGIAVDNDGNLLIADSLNNRVQV 60
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
+G FV FG +G+ G L+ P+ +AV+ V+V++ NHRV
Sbjct: 61 ITIEGEFVSSFGRLGSSPGYLDVPYAVAVNRRGHVLVAEKRNHRV 105
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Query: 111 IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
+++++ NH V+VF G G G G P IAV N ++++DS N+RVQ+
Sbjct: 1 VIISEYENHTVKVFHHHGRSFKTLGGPGIGKGLFMFPRGIAVDNDGNLLIADSLNNRVQV 60
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
+ +G FV FG +G+ G L+ P+ +AV+ V+V++ NHRV
Sbjct: 61 ITI-------EGEFVSSFGRLGSSPGYLDVPYAVAVNRRGHVLVAEKRNHRV 105
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTW 99
+G G G F +PRGIAV D ++++ADS N+RVQV + ++ L
Sbjct: 24 LGGPGIGKGLFMFPRGIAVDNDGNLLIADSLNNRVQVITIEGEFVSSFGRLGSSPGYLDV 83
Query: 100 PRGIAVGPDNSIVVADSSNHRV 121
P +AV ++VA+ NHRV
Sbjct: 84 PYAVAVNRRGHVLVAEKRNHRV 105
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
+ + + N+ +++F G+ + G G G G F G+AV ++GN+L+ D N+R+QV
Sbjct: 1 VIISEYENHTVKVFHHHGRSFKTLGGPGIGKGLFMFPRGIAVDNDGNLLIADSLNNRVQV 60
>gi|260814007|ref|XP_002601707.1| hypothetical protein BRAFLDRAFT_215279 [Branchiostoma floridae]
gi|229287009|gb|EEN57719.1| hypothetical protein BRAFLDRAFT_215279 [Branchiostoma floridae]
Length = 212
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 107/216 (49%), Gaps = 21/216 (9%)
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 163
V + IVVAD N R+Q DG+F K L IAV RVIV+
Sbjct: 17 VVCTEGDIVVADYGNSRLQFLSKDGSFKRKV--------NLRFDPGIAVDGLGRVIVTIG 68
Query: 164 NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
+ Q+F V + +G + KFG G L +AVS++N++I+SD NH ++
Sbjct: 69 H----QVF-----VLRPNGDVMLKFGGRGQSQQHLGSNLRVAVSSSNQIIISDFGNHCLK 119
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
IFD +G + + G GS GQL +P V D + I V DS N R+ +F+ DG F+R
Sbjct: 120 IFDPSGSHLFTSGLRGSGPGQLNWPFSVITDSEDNIIVVDSRNCRVSLFSRDGTFVRH-- 177
Query: 284 CWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G+A+ +G+++V D NH +++F
Sbjct: 178 VLTKERHRLVEPKGLALTHDGHLVVSD--NHSLKMF 211
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 19 LLVSGIGQVGTTPRSQYLQKR---RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSS 75
+ V G+G+V T Q R + K G RG +AV N I+++D
Sbjct: 55 IAVDGLGRVIVTIGHQVFVLRPNGDVMLKFGGRGQSQQHLGSNLRVAVSSSNQIIISDFG 114
Query: 76 NHRVQVCFPHFDLKTNCVFLA---------FTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
NH C FD + +F + WP + +++I+V DS N RV +F
Sbjct: 115 NH----CLKIFDPSGSHLFTSGLRGSGPGQLNWPFSVITDSEDNIIVVDSRNCRVSLFSR 170
Query: 127 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
DGTFV + + +L P +A+++ ++VSD NH +++F
Sbjct: 171 DGTFVRHV--LTKERHRLVEPKGLALTHDGHLVVSD--NHSLKMF 211
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+AV N I+++D NH +++F G+ + G G+ GQL P + + + +IV D
Sbjct: 100 VAVSSSNQIIISDFGNHCLKIFDPSGSHLFTSGLRGSGPGQLNWPFSVITDSEDNIIVVD 159
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
S N RV + F DGTFV + + +L P +A+++ ++VSD NH +
Sbjct: 160 SRNCRVSL-------FSRDGTFVRHV--LTKERHRLVEPKGLALTHDGHLVVSD--NHSL 208
Query: 223 QIF 225
++F
Sbjct: 209 KMF 211
>gi|340386124|ref|XP_003391558.1| PREDICTED: tripartite motif-containing protein 71-like, partial
[Amphimedon queenslandica]
Length = 224
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 80/156 (51%), Gaps = 20/156 (12%)
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQS----------------DGTFVGKF 188
E P +A++ ++VSD NHR+Q ++G + S D TF F
Sbjct: 49 EQPRGVAITPDKFILVSD--NHRIQKISMDGYLIASVGEEGSEPLQFNEPCADLTFPHSF 106
Query: 189 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFP 248
GS G+ GQ P IA+ + V V+D +NHR+Q F +G + FG++GS GQL P
Sbjct: 107 GSEGSANGQFNIPIDIAIDSQGLVYVTDKDNHRIQKFSPDGEFVGQFGTKGSGPGQLNSP 166
Query: 249 RGVAVDD--QGYISVGDSGNNRIQIFTPDGQFLRAF 282
G+ +D G + V + NNRI +FT DG F+ F
Sbjct: 167 GGITIDTAATGLVYVTEEDNNRISVFTSDGVFVSKF 202
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 90/189 (47%), Gaps = 41/189 (21%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDG-----------------------TFVGKFGS 136
PRG+A+ PD I+V+D NHR+Q DG TF FGS
Sbjct: 51 PRGVAITPDKFILVSD--NHRIQKISMDGYLIASVGEEGSEPLQFNEPCADLTFPHSFGS 108
Query: 137 MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAG 196
G+ GQ P IA+ + V V+D +NHR+Q F DG FVG+FG+ G+ G
Sbjct: 109 EGSANGQFNIPIDIAIDSQGLVYVTDKDNHRIQ-------KFSPDGEFVGQFGTKGSGPG 161
Query: 197 QLEHPHYIAVSN--TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
QL P I + T V V++ +N+R+ +F +G ++ F +G + L F D
Sbjct: 162 QLNSPGGITIDTAATGLVYVTEEDNNRISVFTSDGVFVSKF-EDGFQPALLTF------D 214
Query: 255 DQGYISVGD 263
G++ V D
Sbjct: 215 KDGFLYVCD 223
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 75/146 (51%), Gaps = 27/146 (18%)
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS-----------------------F 235
E P +A++ ++VSD NHR+Q ++G +I S F
Sbjct: 49 EQPRGVAITPDKFILVSD--NHRIQKISMDGYLIASVGEEGSEPLQFNEPCADLTFPHSF 106
Query: 236 GSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL 295
GSEGS GQ P +A+D QG + V D N+RIQ F+PDG+F+ FG GSG G+
Sbjct: 107 GSEGSANGQFNIPIDIAIDSQGLVYVTDKDNHRIQKFSPDGEFVGQFGTKGSGPGQLNSP 166
Query: 296 EGVAV--MSNGNILVCDRENHRIQVF 319
G+ + + G + V + +N+RI VF
Sbjct: 167 GGITIDTAATGLVYVTEEDNNRISVF 192
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 75/171 (43%), Gaps = 39/171 (22%)
Query: 48 RGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ--------------------------- 80
R SE PRG+A+ PD I+V+D NHR+Q
Sbjct: 41 RQSEKKLTEQPRGVAITPDKFILVSD--NHRIQKISMDGYLIASVGEEGSEPLQFNEPCA 98
Query: 81 -VCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGN 139
+ FPH F P IA+ + V D NHR+Q F DG FVG+FG+ G+
Sbjct: 99 DLTFPHSFGSEGSANGQFNIPIDIAIDSQGLVYVTDKDNHRIQKFSPDGEFVGQFGTKGS 158
Query: 140 KAGQLEHPHYIAVSN--TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKF 188
GQL P I + T V V++ +N+R+ VF SDG FV KF
Sbjct: 159 GPGQLNSPGGITIDTAATGLVYVTEEDNNRIS-------VFTSDGVFVSKF 202
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 21/101 (20%)
Query: 240 SEEGQLKFPRGVAVDDQGYI-------------------SVGDSGNNRIQIFTP--DGQF 278
SE+ + PRGVA+ +I SVG+ G+ +Q P D F
Sbjct: 43 SEKKLTEQPRGVAITPDKFILVSDNHRIQKISMDGYLIASVGEEGSEPLQFNEPCADLTF 102
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+FG GS +G+F +A+ S G + V D++NHRIQ F
Sbjct: 103 PHSFGSEGSANGQFNIPIDIAIDSQGLVYVTDKDNHRIQKF 143
>gi|260809177|ref|XP_002599383.1| hypothetical protein BRAFLDRAFT_168966 [Branchiostoma floridae]
gi|229284660|gb|EEN55395.1| hypothetical protein BRAFLDRAFT_168966 [Branchiostoma floridae]
Length = 223
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 25/232 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F +P+G+ + P I+VADS NHRVQ+F +G + + + P +
Sbjct: 7 FWFPKGLTICPKGRIIVADSGNHRVQLFDINGKWEREIITRARGTAYPVAPRNVNTDVLC 66
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ +SD + V++ D G + +GK L P + V +VIV+D
Sbjct: 67 NIYISDIGDRTVKVLDTEGHL----KAIIGK--------DILRSPTGVCVDKEGKVIVAD 114
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY-ISVGDSGNNRI-QIFTP 274
+ + ++IF +G + + E +EG LK P+ +A+ G + V +SGN+R+ IF
Sbjct: 115 AEKNTLEIFASDGHHLDTLIPE--QEG-LKEPQEIALTPDGTKLVVVNSGNHRVLYIFYT 171
Query: 275 --------DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
FL +FG GS G F +G+A+ G ILV D NHR+Q+
Sbjct: 172 HLVNMEQRQANFLHSFGKPGSRKGHFFAPKGLAICPKGGILVADSWNHRVQL 223
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 115/242 (47%), Gaps = 38/242 (15%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIA--VG 106
G E G F +P+G+ + P I+VADS NHRVQ+ FD+ T RG A V
Sbjct: 1 GREEGQFWFPKGLTICPKGRIIVADSGNHRVQL----FDINGKWEREIITRARGTAYPVA 56
Query: 107 PDN-------SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P N +I ++D + V+V ++G G L P + V +VI
Sbjct: 57 PRNVNTDVLCNIYISDIGDRTVKVLDTEGHLKAIIGK-----DILRSPTGVCVDKEGKVI 111
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSN 218
V+D+ + ++IF +G ++ + L+ P IA++ + +++V +S
Sbjct: 112 VADAEKNTLEIFASDGH----------HLDTLIPEQEGLKEPQEIALTPDGTKLVVVNSG 161
Query: 219 NHRV------QIFDVNGR---VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
NHRV + ++ R + SFG GS +G P+G+A+ +G I V DS N+R+
Sbjct: 162 NHRVLYIFYTHLVNMEQRQANFLHSFGKPGSRKGHFFAPKGLAICPKGGILVADSWNHRV 221
Query: 270 QI 271
Q+
Sbjct: 222 QL 223
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 239 GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
G EEGQ FP+G+ + +G I V DSGN+R+Q+F +G++ R
Sbjct: 1 GREEGQFWFPKGLTICPKGRIIVADSGNHRVQLFDINGKWER 42
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 36 LQKRRLQF--KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV 81
+++R+ F G GS G F P+G+A+ P I+VADS NHRVQ+
Sbjct: 176 MEQRQANFLHSFGKPGSRKGHFFAPKGLAICPKGGILVADSWNHRVQL 223
>gi|260814093|ref|XP_002601750.1| hypothetical protein BRAFLDRAFT_76030 [Branchiostoma floridae]
gi|229287052|gb|EEN57762.1| hypothetical protein BRAFLDRAFT_76030 [Branchiostoma floridae]
Length = 669
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 128/284 (45%), Gaps = 26/284 (9%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
RL +G RGS G F W + V + I+ D N R+QV T + L F
Sbjct: 405 RLSTALGKRGSGDGEFDWAASVFVNNEGFIIATDVRNKRLQVMDEENLYGT--INLGFE- 461
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY-IAVSNTNRV 158
P +A DN ++ H + V + G G + + + P IAV R+
Sbjct: 462 PWDVACK-DNGDLLVTGDGHSIHVLDNQGKEKETINVEGFR--EKDKPSRGIAVDRLGRI 518
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK--AGQLEHPHYIAVSNTNRVIVSD 216
IVS Q+F V DGT V S ++ QL + ++ ++VIVSD
Sbjct: 519 IVSIG----WQVF-----VLLPDGTPVHTLASSSHQLFGNQLR----LTTNSDSQVIVSD 565
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
N +++F NG + FG GS +G +P V DD I V DS N+R+ F+ DG
Sbjct: 566 WRNDIIKVFGQNGEFVKEFGLYGSGDGYFDYPTSVHTDDHNNIIVADSKNHRVSQFSKDG 625
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDR-ENHRIQVF 319
F+R S D +GVA++ +G ++V DR EN ++V+
Sbjct: 626 TFVRHL---LSRDNGLWHPQGVAIIPDGKLVVSDRSENSCVKVY 666
>gi|91080285|ref|XP_973904.1| PREDICTED: similar to B-box type zinc-finger protein ncl-1
[Tribolium castaneum]
Length = 834
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 108/259 (41%), Gaps = 44/259 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G +G + I+VAD++NHR+QVF G F +FG+ G GQL +P +AV T
Sbjct: 578 FNSPHGFCLGLEEDIIVADTNNHRIQVFDKSGVFKFQFGTSGKDEGQLWYPRKVAVMRTT 637
Query: 157 -RVIVSDSNNH--RVQIFDVNGRVFQSDGT----FVGKFGSMGN---------------- 193
+ +V D N R+QIF NG + V G+
Sbjct: 638 GKYVVCDRGNERSRMQIFTKNGHFLKKIAIRYIDIVAGLAVTGHGEIVAVDSVSPTVFII 697
Query: 194 -KAGQL----------EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
++G+L P IA+ + V D H V +F G + G E
Sbjct: 698 SESGELIRWFDCSDFMREPSDIAI-HGKEFYVCDFKGHNVVVFSDEGHFLRRIGYESI-- 754
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNR--IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
FP G+ + D G I +GDS NR + +F+ DG + F C GL+ +
Sbjct: 755 --TNFPNGIDISDAGDILIGDSHGNRFHVAVFSRDGCLISEFECPYVKVSRCCGLK---I 809
Query: 301 MSNGNILVCDRENHRIQVF 319
S G ++ + NH + V
Sbjct: 810 TSEGYVVTLAKNNHHVLVL 828
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 69/127 (54%), Gaps = 8/127 (6%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
KFG +G GQ PH + +IV+D+NNHR+Q+FD +G FG+ G +EGQL
Sbjct: 567 KFGQLGPNKGQFNSPHGFCLGLEEDIIVADTNNHRIQVFDKSGVFKFQFGTSGKDEGQLW 626
Query: 247 FPRGVAV-DDQGYISVGDSGN--NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
+PR VAV G V D GN +R+QIFT +G FL+ + G+AV +
Sbjct: 627 YPRKVAVMRTTGKYVVCDRGNERSRMQIFTKNGHFLKKIAIR-----YIDIVAGLAVTGH 681
Query: 304 GNILVCD 310
G I+ D
Sbjct: 682 GEIVAVD 688
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 84/190 (44%), Gaps = 20/190 (10%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
KFG +G GQ PH + +IV+D+NNHR+Q+FD G F +FG+ G
Sbjct: 567 KFGQLGPNKGQFNSPHGFCLGLEEDIIVADTNNHRIQVFD-------KSGVFKFQFGTSG 619
Query: 193 NKAGQLEHPHYIAVSNTN-RVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
GQL +P +AV T + +V D N R+QIF NG + +
Sbjct: 620 KDEGQLWYPRKVAVMRTTGKYVVCDRGNERSRMQIFTKNGHFLKKIAIR-----YIDIVA 674
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
G+AV G I DS + + I + G+ +R F C +F + VC
Sbjct: 675 GLAVTGHGEIVAVDSVSPTVFIISESGELIRWFDC-----SDFMREPSDIAIHGKEFYVC 729
Query: 310 DRENHRIQVF 319
D + H + VF
Sbjct: 730 DFKGHNVVVF 739
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
++ + FG G +GQ P G + + I V D+ N+RIQ+F G F FG G +
Sbjct: 563 QIRSKFGQLGPNKGQFNSPHGFCLGLEEDIIVADTNNHRIQVFDKSGVFKFQFGTSGKDE 622
Query: 290 GEFKGLEGVAVM-SNGNILVCDR--ENHRIQVF 319
G+ VAVM + G +VCDR E R+Q+F
Sbjct: 623 GQLWYPRKVAVMRTTGKYVVCDRGNERSRMQIF 655
>gi|256053301|ref|XP_002570136.1| dock-9 [Schistosoma mansoni]
Length = 3063
Score = 89.4 bits (220), Expect = 2e-15, Method: Composition-based stats.
Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 12/171 (7%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A + + +V+D H V V+ + G ++ +FG L P + V + R++
Sbjct: 584 PVDVAETINGNYLVSDYDLHCVTVYNTSGHYMSRFGQR-----YLSGPKGMVVDSRGRIL 638
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D + + IF G+ F+ +FG+ G +P +IAV++ + + VSD +
Sbjct: 639 VVDQKSCMICIFKPTGK-------FINRFGARGLADNHFGNPIFIAVNSRDEIFVSDHVH 691
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQ 270
H +++FDVNG + FG G + G L P G+ D I + D GNNR+Q
Sbjct: 692 HSIKVFDVNGLFLYKFGVNGIDPGMLHAPTGIGFDRFDRIFISDWGNNRVQ 742
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 13/219 (5%)
Query: 9 NINSCFLLQTL-LVSGIGQVGTTP-RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPD 66
+I SC+ + L LV + +V + P + + + + F+ G G PG P +A +
Sbjct: 533 SIPSCYHVNNLYLVVRVDKVLSGPINTVFTLQGQFIFRFGEYGYHPGQLMRPVDVAETIN 592
Query: 67 NSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
+ +V+D H V V H+ + +L + P+G+ V I+V D + + +F
Sbjct: 593 GNYLVSDYDLHCVTVYNTSGHYMSRFGQRYL--SGPKGMVVDSRGRILVVDQKSCMICIF 650
Query: 125 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTF 184
+ G F+ +FG+ G +P +IAV++ + + VSD +H +++FDVN G F
Sbjct: 651 KPTGKFINRFGARGLADNHFGNPIFIAVNSRDEIFVSDHVHHSIKVFDVN-------GLF 703
Query: 185 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
+ KFG G G L P I +R+ +SD N+RVQ
Sbjct: 704 LYKFGVNGIDPGMLHAPTGIGFDRFDRIFISDWGNNRVQ 742
Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
VF G F+ +FG G GQL P +A + +VSD + H V +++ +G ++ FG
Sbjct: 560 VFTLQGQFIFRFGEYGYHPGQLMRPVDVAETINGNYLVSDYDLHCVTVYNTSGHYMSRFG 619
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE 296
L P+G+ VD +G I V D + I IF P G+F+ FG G D F
Sbjct: 620 QR-----YLSGPKGMVVDSRGRILVVDQKSCMICIFKPTGKFINRFGARGLADNHFGNPI 674
Query: 297 GVAVMSNGNILVCDRENHRIQVF 319
+AV S I V D +H I+VF
Sbjct: 675 FIAVNSRDEIFVSDHVHHSIKVF 697
Score = 79.7 bits (195), Expect = 2e-12, Method: Composition-based stats.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 12/195 (6%)
Query: 123 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDG 182
VF G F+ +FG G GQL P +A + +VSD + H V +++ +G
Sbjct: 560 VFTLQGQFIFRFGEYGYHPGQLMRPVDVAETINGNYLVSDYDLHCVTVYNTSGH------ 613
Query: 183 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
++ +FG L P + V + R++V D + + IF G+ I FG+ G +
Sbjct: 614 -YMSRFGQR-----YLSGPKGMVVDSRGRILVVDQKSCMICIFKPTGKFINRFGARGLAD 667
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMS 302
P +AV+ + I V D ++ I++F +G FL FG G G G+
Sbjct: 668 NHFGNPIFIAVNSRDEIFVSDHVHHSIKVFDVNGLFLYKFGVNGIDPGMLHAPTGIGFDR 727
Query: 303 NGNILVCDRENHRIQ 317
I + D N+R+Q
Sbjct: 728 FDRIFISDWGNNRVQ 742
>gi|290992224|ref|XP_002678734.1| predicted protein [Naegleria gruberi]
gi|284092348|gb|EFC45990.1| predicted protein [Naegleria gruberi]
Length = 1366
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 145/337 (43%), Gaps = 87/337 (25%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT------------------W 99
P GIAV ++ I ADS NHR++ D+ N + T
Sbjct: 111 PYGIAVSSNDEIYFADSMNHRIR----KIDITGNITTVVGTGANTFSGDGGLATDCTMNT 166
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV-----GKFGSMGNKA----GQLEHPHYI 150
P +++ + +AD N+R++ ++GT V G+ G +G+ + + +
Sbjct: 167 PMDVSLSASGELYIADMYNYRIRKVLTNGTIVTFAGNGQSGHIGDGGLATNAAMALAYGV 226
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVSN 208
V + V +SDS N +V+ DVNG + G+ G F ++ A L HP + +
Sbjct: 227 KVFSNGEVYISDSFNFKVRKVDVNGNITTVAGSGAGPFNGDNVLATAANLNHPTDVLRLD 286
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGS--------EGSEEGQLKFPRGVAVDDQGYIS 260
T +I++D++N+R+++ NG +IT+ G+ E +EE L P G+ + G +
Sbjct: 287 TGELIIADTDNYRIRLVMPNGTIITTAGNGTASFSDGEIAEENGLSLPTGLLMIQNGLL- 345
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWG---------SGDGEF---------KGLEG----- 297
+ D+GN RI++ R + C+G SG G+ G EG
Sbjct: 346 IADAGNKRIRLLQS-----RIYSCYGKSYLDSSVCSGQGQCVGNNMCQCNAGFEGPTCLP 400
Query: 298 -----------------VAVMSNGNILVCDRENHRIQ 317
++ +SNG+++V D +H I+
Sbjct: 401 SSYYITTVARGLKDPQKISKLSNGDLIVSDTGDHSIK 437
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 127/266 (47%), Gaps = 42/266 (15%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN-------------CVFLAFTWPR 101
F P GIAV ++ I +ADS NHR++ + ++ T P
Sbjct: 469 FNKPYGIAVTINDEIYIADSLNHRIRFIDVNGNISTVVGTSIGFSGDGGLATAAKLNAPM 528
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFV-----GKFGSMGNK----AGQLEHPHYIAV 152
+++ + +AD N+R++ ++GT V G+ G +G+ + L + + V
Sbjct: 529 DVSLSASGDLYIADRDNYRIRKVLANGTIVTFAGNGQSGHIGDGGQAISAALSQAYGVRV 588
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVSNTN 210
N + V +SDSNN +V+ DV+G + GT G F ++ A L HP +A +
Sbjct: 589 VN-DEVYISDSNNFKVRKIDVSGVITTIAGTGAGPFNGDNVLATAANLNHPTDVAFLSNG 647
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFG------SEG--SEEGQLKFPRGVAV--DDQGYIS 260
++++D++N+RV++ NG +++ G S+G + L P G+ V DD+ YI+
Sbjct: 648 EMLIADTDNNRVRMVLTNGTIVSIAGNGTASFSDGRIATSRGLSLPTGILVVSDDEIYIA 707
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWG 286
D+ N RI++ + + F C G
Sbjct: 708 --DAKNGRIRLLSS-----KFFTCNG 726
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 122/252 (48%), Gaps = 38/252 (15%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQ--------VFQSDGTFVGKFGSMGNKA--GQLEHPHY 149
P+ I+ + ++V+D+ +H ++ V + GT V F G A Q P+
Sbjct: 415 PQKISKLSNGDLIVSDTGDHSIKKISYSTGVVTRIAGTGVAGFSGDGGLATLAQFNKPYG 474
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG-NKAGQLEHPHYIAVSN 208
IAV+ + + ++DS NHR++ DVNG + GT +G G G A +L P +++S
Sbjct: 475 IAVTINDEIYIADSLNHRIRFIDVNGNISTVVGTSIGFSGDGGLATAAKLNAPMDVSLSA 534
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGS----EEGQ-----LKFPRGV-AVDDQGY 258
+ + ++D +N+R++ NG ++T G+ S + GQ L GV V+D+ Y
Sbjct: 535 SGDLYIADRDNYRIRKVLANGTIVTFAGNGQSGHIGDGGQAISAALSQAYGVRVVNDEVY 594
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG------------LEGVAVMSNGNI 306
IS DS N +++ G G+G G F G VA +SNG +
Sbjct: 595 IS--DSNNFKVRKIDVSGVITT---IAGTGAGPFNGDNVLATAANLNHPTDVAFLSNGEM 649
Query: 307 LVCDRENHRIQV 318
L+ D +N+R+++
Sbjct: 650 LIADTDNNRVRM 661
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 37/255 (14%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV-----GKFGSMGNKA----GQLEHP 147
F P+ +A + I+V D+ H ++ G G G G+ Q+ P
Sbjct: 52 FKDPQKLARLSNGDILVTDALGHAIKKINGTGVITTIAGTGVAGFAGDNGPAINAQVNKP 111
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ--LEHPHYIA 205
+ IAVS+ + + +DS NHR++ D+ G + GT F G A + P ++
Sbjct: 112 YGIAVSSNDEIYFADSMNHRIRKIDITGNITTVVGTGANTFSGDGGLATDCTMNTPMDVS 171
Query: 206 VSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG----------SEEGQLKFPRGVAVDD 255
+S + + ++D N+R++ NG ++T F G + + GV V
Sbjct: 172 LSASGELYIADMYNYRIRKVLTNGTIVT-FAGNGQSGHIGDGGLATNAAMALAYGVKVFS 230
Query: 256 QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN------------ 303
G + + DS N +++ +G GSG G F G +A +N
Sbjct: 231 NGEVYISDSFNFKVRKVDVNGNITTV---AGSGAGPFNGDNVLATAANLNHPTDVLRLDT 287
Query: 304 GNILVCDRENHRIQV 318
G +++ D +N+RI++
Sbjct: 288 GELIIADTDNYRIRL 302
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 109/260 (41%), Gaps = 53/260 (20%)
Query: 111 IVVADSSNHRVQVFQSDGTFVGKFG--SMGNKAGQLEHPHYIAVSN-----TNRVIVSDS 163
+++AD+ N+R+++ +GT + G + G++ + +++ N ++++D+
Sbjct: 290 LIIADTDNYRIRLVMPNGTIITTAGNGTASFSDGEIAEENGLSLPTGLLMIQNGLLIADA 349
Query: 164 NNHRVQ-----IFDVNGRVFQSDGTFVGKFGSMGNKAGQ--------------------- 197
N R++ I+ G+ + G+ +GN Q
Sbjct: 350 GNKRIRLLQSRIYSCYGKSYLDSSVCSGQGQCVGNNMCQCNAGFEGPTCLPSSYYITTVA 409
Query: 198 --LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG----------SEEGQL 245
L+ P I+ + +IVSD+ +H ++ + V+T G + Q
Sbjct: 410 RGLKDPQKISKLSNGDLIVSDTGDHSIKKISYSTGVVTRIAGTGVAGFSGDGGLATLAQF 469
Query: 246 KFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG--SGDG------EFKGLEG 297
P G+AV I + DS N+RI+ +G G SGDG +
Sbjct: 470 NKPYGIAVTINDEIYIADSLNHRIRFIDVNGNISTVVGTSIGFSGDGGLATAAKLNAPMD 529
Query: 298 VAVMSNGNILVCDRENHRIQ 317
V++ ++G++ + DR+N+RI+
Sbjct: 530 VSLSASGDLYIADRDNYRIR 549
>gi|290986743|ref|XP_002676083.1| predicted protein [Naegleria gruberi]
gi|284089683|gb|EFC43339.1| predicted protein [Naegleria gruberi]
Length = 733
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 135/307 (43%), Gaps = 53/307 (17%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT-----NCVF---------LAFTWPRGI 103
P GI V +N + +AD SNHR++ + ++ T C F +P +
Sbjct: 13 PVGIFVSSNNEVYIADYSNHRIRKILKNGNIATIAGKGTCGFSGDNGPATNAQIYYPSSV 72
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGS-MGNKAG--------QLEHPHYIAVSN 154
V +N + +AD SNHR++ +G V G+ +G +G Q+ +P+ + VS+
Sbjct: 73 FVSSNNEVYIADQSNHRIRKILENGNIVTIAGNGIGGFSGDNGPATNAQIYYPYSVFVSS 132
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGT----FVGKFGSMGNKAGQLEHPHYIAVSNTN 210
N V + D N+RV+ NG + G F G G N QL +P + VS+ N
Sbjct: 133 NNVVYIVDYGNNRVRKILGNGNIVTIAGNGTSGFSGDNGPATN--AQLNNPVGVFVSSNN 190
Query: 211 RVIVSDSNNHRVQIFDVNGRVIT---------SFGSEGSEEGQLKFPRGVAVDDQGYISV 261
V ++D +NHR++ NG ++T + + QL P V V + + +
Sbjct: 191 EVYIADQSNHRIRKILENGNIVTIAGNGTGGFGGDNGPATNAQLYIPYSVFVSNNE-VYI 249
Query: 262 GDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV-----------MSNGNILVCD 310
D GNNRI+ +G + G SG F G G A +SN + + D
Sbjct: 250 VDYGNNRIRKILGNGNIVTIAGNGTSG---FSGDNGPATNAQLNRPSSVFVSNNEVYIAD 306
Query: 311 RENHRIQ 317
NH+I+
Sbjct: 307 LNNHKIR 313
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGT----FVGKFG 189
S+ +A QL +P I VS+ N V ++D +NHR++ NG + G F G G
Sbjct: 1 MSSLATRA-QLYNPVGIFVSSNNEVYIADYSNHRIRKILKNGNIATIAGKGTCGFSGDNG 59
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG---------SEGS 240
N Q+ +P + VS+ N V ++D +NHR++ NG ++T G + +
Sbjct: 60 PATN--AQIYYPSSVFVSSNNEVYIADQSNHRIRKILENGNIVTIAGNGIGGFSGDNGPA 117
Query: 241 EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG---------DGE 291
Q+ +P V V + + D GNNR++ +G + G SG + +
Sbjct: 118 TNAQIYYPYSVFVSSNNVVYIVDYGNNRVRKILGNGNIVTIAGNGTSGFSGDNGPATNAQ 177
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQ 317
GV V SN + + D+ NHRI+
Sbjct: 178 LNNPVGVFVSSNNEVYIADQSNHRIR 203
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 115/273 (42%), Gaps = 39/273 (14%)
Query: 57 WPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT--------------NCVFLAFTWPRG 102
+P + V +N + +AD SNHR++ + ++ T +P
Sbjct: 68 YPSSVFVSSNNEVYIADQSNHRIRKILENGNIVTIAGNGIGGFSGDNGPATNAQIYYPYS 127
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFV-----GKFGSMGNKA----GQLEHPHYIAVS 153
+ V +N + + D N+RV+ +G V G G G+ QL +P + VS
Sbjct: 128 VFVSSNNVVYIVDYGNNRVRKILGNGNIVTIAGNGTSGFSGDNGPATNAQLNNPVGVFVS 187
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA--GQLEHPHYIAVSNTNR 211
+ N V ++D +NHR++ NG + G G FG A QL P+ + VSN N
Sbjct: 188 SNNEVYIADQSNHRIRKILENGNIVTIAGNGTGGFGGDNGPATNAQLYIPYSVFVSN-NE 246
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGS---------EEGQLKFPRGVAVDDQGYISVG 262
V + D N+R++ NG ++T G+ S QL P V V + + +
Sbjct: 247 VYIVDYGNNRIRKILGNGNIVTIAGNGTSGFSGDNGPATNAQLNRPSSVFVSNNE-VYIA 305
Query: 263 DSGNNRIQIFTPDGQFLRAFGCWG---SGDGEF 292
D N++I+ +G + G SGD F
Sbjct: 306 DLNNHKIRKILENGNIITIAGNGTKGFSGDSPF 338
>gi|156363522|ref|XP_001626092.1| predicted protein [Nematostella vectensis]
gi|156212955|gb|EDO33992.1| predicted protein [Nematostella vectensis]
Length = 877
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 111/229 (48%), Gaps = 16/229 (6%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH-PHYIAVSNT 155
F RGI V N I+V+D N RVQVF + G F+ +FG G A + + P +AV +
Sbjct: 618 FKSVRGITVDLTNRIIVSDRDNARVQVFDASGNFLFQFGRKGGAASEFKCGPCDVAVDSA 677
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM--GNKAGQLEHPHYIAVSNTNRVI 213
RVI D + V +FD S G FV + G+ GQ +AV + +RV+
Sbjct: 678 GRVIACDWSGDGVLVFD-------SRGNFVSRLRPFEEGDGLGQFCR---LAVDHHDRVL 727
Query: 214 VSDSNNHRVQIFDV-NGRVITSFGSEGSE-EGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
VSD +N +V +F +G +T + + E +G L P G+ V+ +G + V + + +Q+
Sbjct: 728 VSDYHNRKVHVFARDDGSQVTCYTAVTDEGDGLLNAPSGITVNSKGEVIVALANSGVLQV 787
Query: 272 FTPDGQFLRAFGCWGSG-DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D +R F G +G + +A ++ NIL D N I V
Sbjct: 788 LDSDMNLIRQFAINEKGTNGNLFTTDALACDASDNILAIDGYNDYILVL 836
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 128/290 (44%), Gaps = 33/290 (11%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL------ 95
Q G+ GS G F RGI V N I+V+D N RVQV FD N +F
Sbjct: 605 QLTFGTSGSNSGQFKSVRGITVDLTNRIIVSDRDNARVQV----FDASGNFLFQFGRKGG 660
Query: 96 ---AFTW-PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM--GNKAGQLEHPHY 149
F P +AV ++ D S V VF S G FV + G+ GQ
Sbjct: 661 AASEFKCGPCDVAVDSAGRVIACDWSGDGVLVFDSRGNFVSRLRPFEEGDGLGQFCR--- 717
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA-GQLEHPHYIAVSN 208
+AV + +RV+VSD +N +V +F + DG+ V + ++ ++ G L P I V++
Sbjct: 718 LAVDHHDRVLVSDYHNRKVHVF------ARDDGSQVTCYTAVTDEGDGLLNAPSGITVNS 771
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFG-SEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
VIV+ +N+ +Q+ D + +I F +E G L +A D I D N+
Sbjct: 772 KGEVIVALANSGVLQVLDSDMNLIRQFAINEKGTNGNLFTTDALACDASDNILAIDGYND 831
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD-RENHRI 316
I + DG L G G+AV + G +++ D EN +I
Sbjct: 832 YILVLGQDGSVLARCAM-----GNLNSPCGIAVDAMGRVVISDASENVKI 876
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 71/136 (52%), Gaps = 8/136 (5%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG+ G+ +GQ + I V TNR+IVSD +N RVQ+FD +G + FG +G + K
Sbjct: 608 FGTSGSNSGQFKSVRGITVDLTNRIIVSDRDNARVQVFDASGNFLFQFGRKGGAASEFKC 667
Query: 248 -PRGVAVDDQGYISVGDSGNNRIQIFTPDGQF---LRAFGCWGSGDGEFKGLEGVAVMSN 303
P VAVD G + D + + +F G F LR F G G G+F L AV +
Sbjct: 668 GPCDVAVDSAGRVIACDWSGDGVLVFDSRGNFVSRLRPFE-EGDGLGQFCRL---AVDHH 723
Query: 304 GNILVCDRENHRIQVF 319
+LV D N ++ VF
Sbjct: 724 DRVLVSDYHNRKVHVF 739
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+FG+ GS GQ K RG+ VD I V D N R+Q+F G FL FG G EFK
Sbjct: 607 TFGTSGSNSGQFKSVRGITVDLTNRIIVSDRDNARVQVFDASGNFLFQFGRKGGAASEFK 666
Query: 294 -GLEGVAVMSNGNILVCDRENHRIQVF 319
G VAV S G ++ CD + VF
Sbjct: 667 CGPCDVAVDSAGRVIACDWSGDGVLVF 693
>gi|260806460|ref|XP_002598102.1| hypothetical protein BRAFLDRAFT_85680 [Branchiostoma floridae]
gi|229283373|gb|EEN54114.1| hypothetical protein BRAFLDRAFT_85680 [Branchiostoma floridae]
Length = 851
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 109/259 (42%), Gaps = 45/259 (17%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV------------------------- 131
F +P G+ V + + VAD N R+QVF GTFV
Sbjct: 601 FRYPFGVTVSKEGEVFVADFENQRIQVFTLWGTFVRQFPTVVSGGHRMRPWNIAMDREGN 660
Query: 132 ---------GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDG 182
+F + NK G +H + S + R I D+ + + I + G
Sbjct: 661 LWVVGRADSAEFAVLYNKLGFRQHTIDLQKSASQRGIAVDTRRNHLLITQTTADGYNMYG 720
Query: 183 TFVG--KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGS 240
+ G++G + G ++ P YI V ++VSD NH V ++ G+ FGS GS
Sbjct: 721 EVLAFRLDGTVGRQQG-MKQPWYITVDGEGNILVSDVRNHCVYVYKEYGQF--QFGSRGS 777
Query: 241 EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
G+L P G+ D G I V DSGN+R+ +F G+ L+ + + VAV
Sbjct: 778 GVGELCNPHGICTDSAGNIIVADSGNSRLVLFDKTGRCLKQV------TTDMRMPLAVAV 831
Query: 301 MSNGNILVCDRENHRIQVF 319
G ++V D + H + +F
Sbjct: 832 APQGKLVVTDFQEHTVNIF 850
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y+ K QF+ GSRGS G P GI +I+VADS N R+ + FD C+
Sbjct: 762 YVYKEYGQFQFGSRGSGVGELCNPHGICTDSAGNIIVADSGNSRLVL----FDKTGRCLK 817
Query: 95 LAFT---WPRGIAVGPDNSIVVADSSNHRVQVF 124
T P +AV P +VV D H V +F
Sbjct: 818 QVTTDMRMPLAVAVAPQGKLVVTDFQEHTVNIF 850
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+FG G E GQ ++P GV V +G + V D N RIQ+FT G F+R F SG +
Sbjct: 590 TFGGWGREAGQFRYPFGVTVSKEGEVFVADFENQRIQVFTLWGTFVRQFPTVVSGGHRMR 649
Query: 294 GLEGVAVMSNGNILVCDREN 313
+A+ GN+ V R +
Sbjct: 650 PW-NIAMDREGNLWVVGRAD 668
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG G +AGQ +P + VS V V+D N R+Q+F + G + F + S +++
Sbjct: 591 FGGWGREAGQFRYPFGVTVSKEGEVFVADFENQRIQVFTLWGTFVRQFPTVVSGGHRMR- 649
Query: 248 PRGVAVDDQGYISV 261
P +A+D +G + V
Sbjct: 650 PWNIAMDREGNLWV 663
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 11/135 (8%)
Query: 41 LQFKI-GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC--FPHFDLKTNCVFL-A 96
L F++ G+ G + G P I V + +I+V+D NH V V + F + +
Sbjct: 723 LAFRLDGTVGRQQG-MKQPWYITVDGEGNILVSDVRNHCVYVYKEYGQFQFGSRGSGVGE 781
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
P GI +I+VADS N R+ +F G + + + + P +AV+
Sbjct: 782 LCNPHGICTDSAGNIIVADSGNSRLVLFDKTGRCLKQVTT------DMRMPLAVAVAPQG 835
Query: 157 RVIVSDSNNHRVQIF 171
+++V+D H V IF
Sbjct: 836 KLVVTDFQEHTVNIF 850
>gi|198420795|ref|XP_002122156.1| PREDICTED: similar to zinc finger protein ZF(Bbox/RING)-1 [Ciona
intestinalis]
Length = 524
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 136/283 (48%), Gaps = 27/283 (9%)
Query: 43 FKIGSRGSEPGCFT-WPRGIAVGPDNSIVVADSSNHRVQVC--FPHFDLK--TNCVFLAF 97
FK G RG+ F G+ + D+ I+V+DS N+RVQ+ F +F LK T F
Sbjct: 257 FKFGGRGNRLSQFGGVISGLDITIDDDIIVSDSDNNRVQIFDRFGNFRLKFDTGSDFK-- 314
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT-N 156
P+G+ V IVV S V+VF DG FG G + Y S+T
Sbjct: 315 --PKGLFVTQQRLIVVCCGSE--VRVFTMDGRLKLCFGQ-----GTFRNNCYSVCSDTMG 365
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
V+D H V ++D G + + +FG G+K P +A+S N ++VSD
Sbjct: 366 NYYVTDIVGHTVTVYDETGNIRK-------RFGYQGSKLMNFNQPVAVAISRRNELVVSD 418
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
S NH+++++ + GR + + G +G+ +G+ P G+ D GY+ V D GN+RI F
Sbjct: 419 SQNHQIKVYSLAGRPLHAIGGKGTNDGEFWNPFGICFDAAGYLYVADCGNDRISQFDDRY 478
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+FLR +G K V V S G ++V + ++VF
Sbjct: 479 RFLRHVITRMNG---LKMPSFVKVNSLGQLVVAEWGRQCVKVF 518
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 99/240 (41%), Gaps = 26/240 (10%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
RL+F GS G F + + V S V + + R+++CF + NC
Sbjct: 304 RLKFDTGSDFKPKGLFVTQQRLIVVCCGSEVRVFTMDGRLKLCFGQGTFRNNCY------ 357
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
+ + V D H V V+ G +FG G+K P +A+S N ++
Sbjct: 358 --SVCSDTMGNYYVTDIVGHTVTVYDETGNIRKRFGYQGSKLMNFNQPVAVAISRRNELV 415
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
VSDS NH+++++ + GR + G G G+ +P I + V+D N
Sbjct: 416 VSDSQNHQIKVYSLAGRPLHA-------IGGKGTNDGEFWNPFGICFDAAGYLYVADCGN 468
Query: 220 HRVQIFDVNGR----VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
R+ FD R VIT LK P V V+ G + V + G +++F+ +
Sbjct: 469 DRISQFDDRYRFLRHVITRMNG-------LKMPSFVKVNSLGQLVVAEWGRQCVKVFSLE 521
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 16/143 (11%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-------- 95
+ G +GS+ F P +A+ N +VV+DS NH+++V + L +
Sbjct: 389 RFGYQGSKLMNFNQPVAVAISRRNELVVSDSQNHQIKV----YSLAGRPLHAIGGKGTND 444
Query: 96 -AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
F P GI + VAD N R+ F F+ + N L+ P ++ V++
Sbjct: 445 GEFWNPFGICFDAAGYLYVADCGNDRISQFDDRYRFLRHVITRMNG---LKMPSFVKVNS 501
Query: 155 TNRVIVSDSNNHRVQIFDVNGRV 177
+++V++ V++F + V
Sbjct: 502 LGQLVVAEWGRQCVKVFSLETAV 524
>gi|270006401|gb|EFA02849.1| mei-P26 [Tribolium castaneum]
Length = 890
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 108/259 (41%), Gaps = 44/259 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G +G + I+VAD++NHR+QVF G F +FG+ G GQL +P +AV T
Sbjct: 634 FNSPHGFCLGLEEDIIVADTNNHRIQVFDKSGVFKFQFGTSGKDEGQLWYPRKVAVMRTT 693
Query: 157 -RVIVSDSNNH--RVQIFDVNGRVFQSDGT----FVGKFGSMGN---------------- 193
+ +V D N R+QIF NG + V G+
Sbjct: 694 GKYVVCDRGNERSRMQIFTKNGHFLKKIAIRYIDIVAGLAVTGHGEIVAVDSVSPTVFII 753
Query: 194 -KAGQL----------EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
++G+L P IA+ + V D H V +F G + G E
Sbjct: 754 SESGELIRWFDCSDFMREPSDIAI-HGKEFYVCDFKGHNVVVFSDEGHFLRRIGYESIT- 811
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNR--IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
FP G+ + D G I +GDS NR + +F+ DG + F C GL+ +
Sbjct: 812 ---NFPNGIDISDAGDILIGDSHGNRFHVAVFSRDGCLISEFECPYVKVSRCCGLK---I 865
Query: 301 MSNGNILVCDRENHRIQVF 319
S G ++ + NH + V
Sbjct: 866 TSEGYVVTLAKNNHHVLVL 884
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 69/127 (54%), Gaps = 8/127 (6%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
KFG +G GQ PH + +IV+D+NNHR+Q+FD +G FG+ G +EGQL
Sbjct: 623 KFGQLGPNKGQFNSPHGFCLGLEEDIIVADTNNHRIQVFDKSGVFKFQFGTSGKDEGQLW 682
Query: 247 FPRGVAV-DDQGYISVGDSGN--NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
+PR VAV G V D GN +R+QIFT +G FL+ + G+AV +
Sbjct: 683 YPRKVAVMRTTGKYVVCDRGNERSRMQIFTKNGHFLKKIAIR-----YIDIVAGLAVTGH 737
Query: 304 GNILVCD 310
G I+ D
Sbjct: 738 GEIVAVD 744
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 84/190 (44%), Gaps = 20/190 (10%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
KFG +G GQ PH + +IV+D+NNHR+Q+FD G F +FG+ G
Sbjct: 623 KFGQLGPNKGQFNSPHGFCLGLEEDIIVADTNNHRIQVFD-------KSGVFKFQFGTSG 675
Query: 193 NKAGQLEHPHYIAVSNTN-RVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
GQL +P +AV T + +V D N R+QIF NG + +
Sbjct: 676 KDEGQLWYPRKVAVMRTTGKYVVCDRGNERSRMQIFTKNGHFLKKIAIR-----YIDIVA 730
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
G+AV G I DS + + I + G+ +R F C +F + VC
Sbjct: 731 GLAVTGHGEIVAVDSVSPTVFIISESGELIRWFDC-----SDFMREPSDIAIHGKEFYVC 785
Query: 310 DRENHRIQVF 319
D + H + VF
Sbjct: 786 DFKGHNVVVF 795
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGD 289
++ + FG G +GQ P G + + I V D+ N+RIQ+F G F FG G +
Sbjct: 619 QIRSKFGQLGPNKGQFNSPHGFCLGLEEDIIVADTNNHRIQVFDKSGVFKFQFGTSGKDE 678
Query: 290 GEFKGLEGVAVM-SNGNILVCDR--ENHRIQVF 319
G+ VAVM + G +VCDR E R+Q+F
Sbjct: 679 GQLWYPRKVAVMRTTGKYVVCDRGNERSRMQIF 711
>gi|291240969|ref|XP_002740388.1| PREDICTED: tripartite motif protein-like [Saccoglossus kowalevskii]
Length = 720
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 15/217 (6%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSS 117
P G+A+ +++IVV + V + + + + F P G+ V I+VAD
Sbjct: 515 PIGVAMALNSNIVVVEFDTKHVHIYSENREKIKQFTYKEFVKPYGVTVNSKGHILVADPK 574
Query: 118 NHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 177
H + VF SDG F+ K G + G+L +PH++A + VIVSD+ +
Sbjct: 575 AHCIFVFTSDGDFIMKIGKEEGE-GKLNNPHFVATGRNDDVIVSDTYQ--------GLAL 625
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN--HRVQIFDVNGRVITSF 235
F G F+ + +G+ +L +AV++ +IV+D + HR+ + +G +I S
Sbjct: 626 FTKHGQFIRRIHQIGDD-DKLYDCTSVAVNSDYSIIVADEQSIPHRILVLTYDGTLIRSL 684
Query: 236 GSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
S+ +L P GVAV + GY+ V D GNN I+ +
Sbjct: 685 ---ESQHHKLSRPLGVAVTEDGYVLVPDFGNNCIKKY 718
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 27/227 (11%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P GI V ++++AD+ N R+Q+ S+G ++ + E P +A++ +
Sbjct: 471 FNTPVGITVDKMGNVLIADAGNKRIQILDSNGKYIDQI------LLDSERPIGVAMALNS 524
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQ--SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
++V + + V I+ N + + FV +G N G ++V
Sbjct: 525 NIVVVEFDTKHVHIYSENREKIKQFTYKEFVKPYGVTVNSKGH--------------ILV 570
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+D H + +F +G I G E EG+L P VA + V D+ + +FT
Sbjct: 571 ADPKAHCIFVFTSDGDFIMKIGKEEG-EGKLNNPHFVATGRNDDVIVSDTYQG-LALFTK 628
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN--HRIQVF 319
GQF+R G D + VAV S+ +I+V D ++ HRI V
Sbjct: 629 HGQFIRRIHQIGDDDKLY-DCTSVAVNSDYSIIVADEQSIPHRILVL 674
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 20/159 (12%)
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+DSN + + + D G + K G G + P I V V+++D+ N
Sbjct: 443 ADSNLYIIDVIDTKG---------LWKVGRTGVNNAEFNTPVGITVDKMGNVLIADAGNK 493
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+QI D NG+ I + P GVA+ I V + + I++ + + ++
Sbjct: 494 RIQILDSNGKYIDQILLDSER------PIGVAMALNSNIVVVEFDTKHVHIYSENREKIK 547
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F EF GV V S G+ILV D + H I VF
Sbjct: 548 QFTY-----KEFVKPYGVTVNSKGHILVADPKAHCIFVF 581
>gi|291244144|ref|XP_002741962.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus kowalevskii]
Length = 1057
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 31/284 (10%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----F 97
+K+G G F P ++V +++VAD+ N R+Q+ L +N ++
Sbjct: 796 WKVGRTGVNNEEFNIPIDVSVNKKGNVLVADAGNKRIQI------LDSNGKYIGHILVDL 849
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
G+A+ P+ +IVV + V V+ + + +F + P+ I V++
Sbjct: 850 PHISGVAMAPNGNIVVVEWETKHVHVYNENREKIKQF-----TYKEFVKPYGITVNSKGH 904
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++V+D + +F SDG F+ K G + G+L +PH++A + VIVSDS
Sbjct: 905 ILVADPEASYIFMF-------TSDGDFIMKIGKEEGE-GKLNNPHFVATGRKDDVIVSDS 956
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN--NRIQIFTPD 275
H + +F G+ G ++ +L GVAVD I V D G+ NRI + T
Sbjct: 957 -RHGLALFTQRGQFKRGIHQIGDDD-KLYDSNGVAVDSHYNIVVADQGSTPNRILVLTYF 1014
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G ++ C S + GVAV +G ++V D N I+ +
Sbjct: 1015 GTVIQ---CLESQHNKLSSPHGVAVTQDGYVIVADANNDCIKKY 1055
Score = 61.2 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 22/206 (10%)
Query: 114 ADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 173
AD + + + V + G + K G G + P ++V+ V+V+D+ N R+QI D
Sbjct: 780 ADCNPYIIDVIDTKGLW--KVGRTGVNNEEFNIPIDVSVNKKGNVLVADAGNKRIQILDS 837
Query: 174 NGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT 233
NG+ +G+ L H +A++ ++V + V +++ N I
Sbjct: 838 NGKY-------------IGHILVDLPHISGVAMAPNGNIVVVEWETKHVHVYNENREKIK 884
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
F + + P G+ V+ +G+I V D + I +FT DG F+ G G+G+
Sbjct: 885 QFTYK-----EFVKPYGITVNSKGHILVADPEASYIFMFTSDGDFIMKIG-KEEGEGKLN 938
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
VA +++V D H + +F
Sbjct: 939 NPHFVATGRKDDVIVSD-SRHGLALF 963
>gi|186681739|ref|YP_001864935.1| hypothetical protein Npun_R1271 [Nostoc punctiforme PCC 73102]
gi|186464191|gb|ACC79992.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102]
Length = 398
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 115/263 (43%), Gaps = 31/263 (11%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVAD--------SSNHRVQVCFPHFDLKTNCVFL- 95
IGS G PG P+GI V + ++A+ + N+ V F +
Sbjct: 36 IGSPGFGPGELFVPQGITVDSQGNTLIANGRGVNPDGTPNYNVGNKIEKFSPSGQYIGAI 95
Query: 96 --------AFTWPRGIAVGP-DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH 146
F P + P + D N+R+ F S G F+ F + G +E
Sbjct: 96 GSGGTGPGQFDEPTTVDFNPVTGDLYAGDVYNNRINQFDSQGNFIRSFAN-GEFTPLVEG 154
Query: 147 -----PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP 201
P + T V + D N R+ F +G+ G G++G GQ +
Sbjct: 155 RLFFGPSGVTFDKTGNVYIGDFNGERILKFTPDGQQIGVIG------GTLGTAPGQFQGV 208
Query: 202 HYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
+ +S + + V+D N+RVQ+ D NG + +FGS GS GQL P G+ VDDQ +
Sbjct: 209 AGLRISPVSGNIFVADQYNNRVQVLDPNGNPLLAFGSAGSGPGQLLQPIGIEVDDQENVY 268
Query: 261 VGDSGNNRIQIFTPDGQFLRAFG 283
V DS N+R+Q+F +G FL +FG
Sbjct: 269 VADSINSRVQVFDKNGNFLTSFG 291
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 100/224 (44%), Gaps = 33/224 (14%)
Query: 30 TPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGP-DNSIVVADSSNHRVQVCFPHFDL 88
+P QY+ IGS G+ PG F P + P + D N+R+ FD
Sbjct: 86 SPSGQYIGA------IGSGGTGPGQFDEPTTVDFNPVTGDLYAGDVYNNRIN----QFDS 135
Query: 89 KTNCV-------FLA------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG 135
+ N + F F P G+ ++ + D + R+ F DG +G G
Sbjct: 136 QGNFIRSFANGEFTPLVEGRLFFGPSGVTFDKTGNVYIGDFNGERILKFTPDGQQIGVIG 195
Query: 136 -SMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
++G GQ + + +S + + V+D N+RVQ+ D NG + FGS G+
Sbjct: 196 GTLGTAPGQFQGVAGLRISPVSGNIFVADQYNNRVQVLDPNGNPLLA-------FGSAGS 248
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS 237
GQL P I V + V V+DS N RVQ+FD NG +TSFG
Sbjct: 249 GPGQLLQPIGIEVDDQENVYVADSINSRVQVFDKNGNFLTSFGE 292
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 17/101 (16%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQG--YISVGDSGN----------NRIQIFTPDGQFLRA 281
S GS G G+L P+G+ VD QG I+ G N N+I+ F+P GQ++ A
Sbjct: 35 SIGSPGFGPGELFVPQGITVDSQGNTLIANGRGVNPDGTPNYNVGNKIEKFSPSGQYIGA 94
Query: 282 FGCWGSGDGEFKGLEGVAVMSN---GNILVCDRENHRIQVF 319
G G+G G+F E V N G++ D N+RI F
Sbjct: 95 IGSGGTGPGQFD--EPTTVDFNPVTGDLYAGDVYNNRINQF 133
>gi|167041731|gb|ABZ06475.1| putative NHL repeat protein [uncultured marine microorganism
HF4000_010I05]
Length = 278
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 89/179 (49%), Gaps = 13/179 (7%)
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
+ P +AV + +RV V V +FD GR+ + G+LE H
Sbjct: 27 FQAPSAVAVDSHDRVYVFQRRGPPVLVFDREGRLL----------AEWPRRDGELEDAHL 76
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF--PRGVAVDDQGYISV 261
I V + V ++D ++H+V + +G ++ + G+ Q F P +AV G I +
Sbjct: 77 IYVGPDDGVYLTDRDSHQVLKYTSDGEMLMALGTRHQAALQAPFNHPSDIAVAPTGEIYI 136
Query: 262 GDS-GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
D GN+ + F+ +G ++ +FG GSG G+F+ + + +G + VCDREN R+QVF
Sbjct: 137 SDGYGNSSVHRFSSEGGYIASFGTPGSGPGQFRVPHSIRIAQDGRVYVCDRENDRVQVF 195
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 20/219 (9%)
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
+F P +AV + + V V VF +G + ++ + G+LE H I V
Sbjct: 26 SFQAPSAVAVDSHDRVYVFQRRGPPVLVFDREGRLLAEWP---RRDGELEDAHLIYVGPD 82
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ--LEHPHYIAVSNTNRVI 213
+ V ++D ++H+V + SDG + G+ A Q HP IAV+ T +
Sbjct: 83 DGVYLTDRDSHQVL-------KYTSDGEMLMALGTRHQAALQAPFNHPSDIAVAPTGEIY 135
Query: 214 VSDS-NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+SD N V F G I SFG+ GS GQ + P + + G + V D N+R+Q+F
Sbjct: 136 ISDGYGNSSVHRFSSEGGYIASFGTPGSGPGQFRVPHSIRIAQDGRVYVCDRENDRVQVF 195
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDR 311
+ G+FL + +FK G+ + +N + V D+
Sbjct: 196 SESGEFLDQW-------TDFKSPMGIHIDANQIVYVTDQ 227
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 94/234 (40%), Gaps = 39/234 (16%)
Query: 57 WPRG---------IAVGPDNSIVVADSSNHRV-------QVCFPHFDLKTNCVFLAFTWP 100
WPR I VGPD+ + + D +H+V ++ + F P
Sbjct: 64 WPRRDGELEDAHLIYVGPDDGVYLTDRDSHQVLKYTSDGEMLMALGTRHQAALQAPFNHP 123
Query: 101 RGIAVGPDNSIVVADS-SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
IAV P I ++D N V F S+G ++ FG+ G+ GQ PH I ++ RV
Sbjct: 124 SDIAVAPTGEIYISDGYGNSSVHRFSSEGGYIASFGTPGSGPGQFRVPHSIRIAQDGRVY 183
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D N RVQ VF G F+ ++ + G I + + N+++
Sbjct: 184 VCDRENDRVQ-------VFSESGEFLDQWTDFKSPMG-------IHI-DANQIVYVTDQV 228
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
R+ I ++ G ++ + +F V D G + D N R+Q F
Sbjct: 229 PRLSILNLEGELL-------ARGRTFEFGHNVYSDSNGDLYAVDVANQRVQKFV 275
>gi|260794818|ref|XP_002592404.1| hypothetical protein BRAFLDRAFT_67269 [Branchiostoma floridae]
gi|229277623|gb|EEN48415.1| hypothetical protein BRAFLDRAFT_67269 [Branchiostoma floridae]
Length = 598
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 139/304 (45%), Gaps = 34/304 (11%)
Query: 32 RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH--FDLK 89
++Q + RL G G+ G + P +AV + I VA+ + +QV F +
Sbjct: 307 QTQTVTYERL-LTFGKPGTGSGQLSRPHAVAVSTEGEIFVANIMSVHIQVFTMQGGFICQ 365
Query: 90 TNCVFLAFTWPRG------IAV-----GPDNSIV-VADSSNHRVQVFQSDGTFVGKFGSM 137
PR IA+ G D ++ V + + V V+ G VG S
Sbjct: 366 IPTALSERMGPREPDSIDPIAMTMNDEGKDLVVMGVKELTTGYVVVYTKQGFLVGMPFS- 424
Query: 138 GNKAGQLEHPHY--IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA 195
L+H + +A+ NR+++S + + +Q +VF + G VG G ++
Sbjct: 425 ------LKHTGWRGVAMHGKNRILISQTTGNDMQNIHGEVQVFDTSGKHVGTVG----RS 474
Query: 196 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD 255
++ PHYI VS ++VSD NH V +++ +G+ + FG GS GQLK P G+ D
Sbjct: 475 QGMKDPHYITVSGEGNILVSDKYNHCVFVYNEDGKFLFKFGGMGSGGGQLKEPGGICTDR 534
Query: 256 QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHR 315
G I V DSGN R+++F G+FL+ + K VA+ G ++V D + +
Sbjct: 535 AGNIIVADSGNKRVELFDKTGRFLKHI------TTDMKKPCAVAMAPQGQLVVTDIDGNT 588
Query: 316 IQVF 319
I +F
Sbjct: 589 ITIF 592
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 13/129 (10%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P I V + +I+V+D NH V V+ DG F+ KFG MG+ GQL+ P I +I
Sbjct: 480 PHYITVSGEGNILVSDKYNHCVFVYNEDGKFLFKFGGMGSGGGQLKEPGGICTDRAGNII 539
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+DS N RV++FD GR + T + K P +A++ +++V+D +
Sbjct: 540 VADSGNKRVELFDKTGRFLKHITTDMKK-------------PCAVAMAPQGQLVVTDIDG 586
Query: 220 HRVQIFDVN 228
+ + IF N
Sbjct: 587 NTITIFGTN 595
>gi|344924046|ref|ZP_08777507.1| NHL repeat containing protein [Candidatus Odyssella
thessalonicensis L13]
Length = 368
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 110/242 (45%), Gaps = 22/242 (9%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGT---FVGK----FGSMGNKAGQLEHPHY 149
F +P GIAV +I VADS+NHR++ S GT F G + Q +P+
Sbjct: 55 FNYPYGIAVHSSGTIYVADSANHRIRSISSAGTTSVFAGSGTAGTTEGTGASAQFNNPYG 114
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
+AV ++ + VS+ NHR++ G G+ G G+ A + + P+ +AV ++
Sbjct: 115 VAVDSSGTLYVSEYTNHRIRKITSAGVTSLLAGSAQGYAEGTGSGA-RFDRPYSVAVDSS 173
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSE--GSEEG-----QLKFPRGVAVDDQGYISVG 262
V V+D N R++ G T GS G EG Q P VAVD G + V
Sbjct: 174 GTVYVADFFNSRIRRITSAGVTSTLAGSSTGGYLEGTGGAAQFGTPIDVAVDSSGTVYVT 233
Query: 263 DSGNNRIQIFTPDG--QFLRAFGCWGSGDG-----EFKGLEGVAVMSNGNILVCDRENHR 315
D+ R++ T G L G +G F G+AV S+G V D +NHR
Sbjct: 234 DTYTQRVRKITSGGVTSLLAGSNTIGYAEGTGASARFSSPYGIAVDSSGTAYVADSDNHR 293
Query: 316 IQ 317
I+
Sbjct: 294 IR 295
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 123/298 (41%), Gaps = 38/298 (12%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---------------FTW 99
F +P GIAV +I VADS+NHR++ T VF F
Sbjct: 55 FNYPYGIAVHSSGTIYVADSANHRIRSI---SSAGTTSVFAGSGTAGTTEGTGASAQFNN 111
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKA------GQLEHPHYIAVS 153
P G+AV ++ V++ +NHR++ S G GS A + + P+ +AV
Sbjct: 112 PYGVAVDSSGTLYVSEYTNHRIRKITSAGVTSLLAGSAQGYAEGTGSGARFDRPYSVAVD 171
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
++ V V+D N R++ G G+ G + A Q P +AV ++ V
Sbjct: 172 SSGTVYVADFFNSRIRRITSAGVTSTLAGSSTGGYLEGTGGAAQFGTPIDVAVDSSGTVY 231
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSE--GSEEG-----QLKFPRGVAVDDQGYISVGDSGN 266
V+D+ RV+ G GS G EG + P G+AVD G V DS N
Sbjct: 232 VTDTYTQRVRKITSGGVTSLLAGSNTIGYAEGTGASARFSSPYGIAVDSSGTAYVADSDN 291
Query: 267 NRIQIFTPDGQ-------FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
+RI+ T G + +F G+ V S+G++ + D NH I+
Sbjct: 292 HRIRKITSGGTTSLIAGTGIAGTAGGSGAGAQFNYPAGIDVDSSGSLYIADSSNHLIR 349
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 20/219 (9%)
Query: 117 SNHRVQVFQSDGTFVGKFGSMGNKAG---QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 173
SN V V+ T G G G + +P+ IAV ++ + V+DS NHR++
Sbjct: 25 SNPTVGVWNIVSTLAGSTGGYAEGTGASARFNYPYGIAVHSSGTIYVADSANHRIRSISS 84
Query: 174 NGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT 233
G G+ + Q +P+ +AV ++ + VS+ NHR++ G
Sbjct: 85 AGTTSVFAGSGTAGTTEGTGASAQFNNPYGVAVDSSGTLYVSEYTNHRIRKITSAGVTSL 144
Query: 234 SFGS-EGSEEG-----QLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGS 287
GS +G EG + P VAVD G + V D N+RI+ T G G S
Sbjct: 145 LAGSAQGYAEGTGSGARFDRPYSVAVDSSGTVYVADFFNSRIRRITSAGVTSTLAGS--S 202
Query: 288 GDGEFKGLEG---------VAVMSNGNILVCDRENHRIQ 317
G +G G VAV S+G + V D R++
Sbjct: 203 TGGYLEGTGGAAQFGTPIDVAVDSSGTVYVTDTYTQRVR 241
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 7/138 (5%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDG--TFVGKFGSMGNKAG-----QLEHPHY 149
F P +AV ++ V D+ RV+ S G + + ++G G + P+
Sbjct: 216 FGTPIDVAVDSSGTVYVTDTYTQRVRKITSGGVTSLLAGSNTIGYAEGTGASARFSSPYG 275
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
IAV ++ V+DS+NHR++ G GT + Q +P I V ++
Sbjct: 276 IAVDSSGTAYVADSDNHRIRKITSGGTTSLIAGTGIAGTAGGSGAGAQFNYPAGIDVDSS 335
Query: 210 NRVIVSDSNNHRVQIFDV 227
+ ++DS+NH ++ D
Sbjct: 336 GSLYIADSSNHLIRKIDA 353
>gi|443695786|gb|ELT96620.1| hypothetical protein CAPTEDRAFT_37323, partial [Capitella teleta]
Length = 205
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 17/184 (9%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A D S+V+AD N R+Q+F G FV GS+ K P ++V +
Sbjct: 10 PSDVAFLFDGSVVIADRDNARLQIFDGQGNFVKTIGSLRFK------PRRLSVLKNGNIA 63
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D+ + V++FD++G S G K + P IAV++ ++IVSD
Sbjct: 64 VTDAAENCVKVFDMSGACVTSWGKKWYK--------SVFKSPCGIAVNSAQQLIVSDMER 115
Query: 220 HRVQIFDVNGRVITSFGSEGSEE---GQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
H + +F V G++I S+G + L++P GV D G I V D G + + FT DG
Sbjct: 116 HTLSVFSVEGKLIRHLQSDGPADIHNACLEYPNGVCTDANGDIYVADWGTHCVSKFTRDG 175
Query: 277 QFLR 280
F+
Sbjct: 176 DFVE 179
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 17/185 (9%)
Query: 138 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ 197
G+ G+++ P +A V+++D +N R+QIFD G FV GS+ K
Sbjct: 1 GSAPGEIKCPSDVAFLFDGSVVIADRDNARLQIFD-------GQGNFVKTIGSLRFK--- 50
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
P ++V + V+D+ + V++FD++G +TS+G + + K P G+AV+
Sbjct: 51 ---PRRLSVLKNGNIAVTDAAENCVKVFDMSGACVTSWGKKWYKS-VFKSPCGIAVNSAQ 106
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE---GVAVMSNGNILVCDRENH 314
+ V D + + +F+ +G+ +R G D LE GV +NG+I V D H
Sbjct: 107 QLIVSDMERHTLSVFSVEGKLIRHLQSDGPADIHNACLEYPNGVCTDANGDIYVADWGTH 166
Query: 315 RIQVF 319
+ F
Sbjct: 167 CVSKF 171
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 23/212 (10%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV----FLAFTWPRGIA 104
GS PG P +A D S+V+AD N R+Q+ FD + N V L F PR ++
Sbjct: 1 GSAPGEIKCPSDVAFLFDGSVVIADRDNARLQI----FDGQGNFVKTIGSLRFK-PRRLS 55
Query: 105 VGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 164
V + +I V D++ + V+VF G V +G K+ + P IAV++ ++IVSD
Sbjct: 56 VLKNGNIAVTDAAENCVKVFDMSGACVTSWGKKWYKS-VFKSPCGIAVNSAQQLIVSDME 114
Query: 165 NHRVQIFDVNGRV---FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
H + +F V G++ QSDG + N LE+P+ + + V+D H
Sbjct: 115 RHTLSVFSVEGKLIRHLQSDGP-----ADIHNAC--LEYPNGVCTDANGDIYVADWGTHC 167
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
V F +G + + E L P GVAV
Sbjct: 168 VSKFTRDGDFVEHV---LTREDGLYHPAGVAV 196
>gi|225175603|ref|ZP_03729597.1| NHL repeat containing protein [Dethiobacter alkaliphilus AHT 1]
gi|225168932|gb|EEG77732.1| NHL repeat containing protein [Dethiobacter alkaliphilus AHT 1]
Length = 325
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 13/184 (7%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+ V + V D+ N RVQVF G FG GNK G+ P+ I ++ +
Sbjct: 81 PMGVLVS-SGQVYVTDTMNKRVQVFSLSGNPRFAFGESGNKPGEFSFPYGIEKTSNGEIF 139
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D N + +FD G F+ F + +L P + + T+ + VS+ +
Sbjct: 140 VADVYNGNISVFD-------DRGNFLRYFAP---QEKELTQPAGLFIHETS-LYVSNLDP 188
Query: 220 HRVQIFDV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
++ +FD+ G ++ GSEG GQL FP + G + V D+GNNRIQ++T +G+F
Sbjct: 189 GQILVFDLETGELLRKIGSEGDGLGQLMFPNDAVIGPDGNLYVSDTGNNRIQVYTINGEF 248
Query: 279 LRAF 282
+
Sbjct: 249 IETL 252
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 114/262 (43%), Gaps = 34/262 (12%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------AFTWPRGIAVGPD 108
P G+ V + V D+ N RVQV F L N F F++P GI +
Sbjct: 81 PMGVLVS-SGQVYVTDTMNKRVQV----FSLSGNPRFAFGESGNKPGEFSFPYGIEKTSN 135
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
I VAD N + VF G F+ F + +L P + + T+ + VS+ + ++
Sbjct: 136 GEIFVADVYNGNISVFDDRGNFLRYFAP---QEKELTQPAGLFIHETS-LYVSNLDPGQI 191
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
+FD+ G + K GS G+ GQL P+ + + VSD+ N+R+Q++ +N
Sbjct: 192 LVFDL------ETGELLRKIGSEGDGLGQLMFPNDAVIGPDGNLYVSDTGNNRIQVYTIN 245
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G I + +E L PRG+ +G + V N I + G+ F G
Sbjct: 246 GEFIETLNNE-----PLFSPRGIIFGPRGQLYVATKITNDITVLDETGRVTERF-----G 295
Query: 289 DGEFKGLEGVAVMSNGNILVCD 310
F+ G+A+ NG + V D
Sbjct: 296 QDLFELPNGIALDDNGFLYVTD 317
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 33/231 (14%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV-FLA---- 96
+F G G++PG F++P GI + I VAD N + V FD + N + + A
Sbjct: 111 RFAFGESGNKPGEFSFPYGIEKTSNGEIFVADVYNGNISV----FDDRGNFLRYFAPQEK 166
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSD-GTFVGKFGSMGNKAGQLEHPHYIAVSN 154
T P G+ + + S+ V++ ++ VF + G + K GS G+ GQL P+ +
Sbjct: 167 ELTQPAGLFIH-ETSLYVSNLDPGQILVFDLETGELLRKIGSEGDGLGQLMFPNDAVIGP 225
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQS--DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
+ VSD+ N+R+Q++ +NG ++ + G + GQL Y+A TN +
Sbjct: 226 DGNLYVSDTGNNRIQVYTINGEFIETLNNEPLFSPRGIIFGPRGQL----YVATKITNDI 281
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
V D GRV FG + + P G+A+DD G++ V D
Sbjct: 282 TVLDE----------TGRVTERFGQD-----LFELPNGIALDDNGFLYVTD 317
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 15/189 (7%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
++ +G L P + VS + +V V+D+ N RVQ+F ++G + F FG G
Sbjct: 67 QYAILGEGENMLHKPMGVLVS-SGQVYVTDTMNKRVQVFSLSG-----NPRFA--FGESG 118
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
NK G+ P+ I ++ + V+D N + +FD G + F + E +L P G+
Sbjct: 119 NKPGEFSFPYGIEKTSNGEIFVADVYNGNISVFDDRGNFLRYFAPQ---EKELTQPAGLF 175
Query: 253 VDDQG-YISVGDSGNNRIQIFTPD-GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
+ + Y+S D G +I +F + G+ LR G G G G+ + +GN+ V D
Sbjct: 176 IHETSLYVSNLDPG--QILVFDLETGELLRKIGSEGDGLGQLMFPNDAVIGPDGNLYVSD 233
Query: 311 RENHRIQVF 319
N+RIQV+
Sbjct: 234 TGNNRIQVY 242
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 7/137 (5%)
Query: 36 LQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL 95
L+ L KIGS G G +P +GPD ++ V+D+ N+R+QV + +
Sbjct: 196 LETGELLRKIGSEGDGLGQLMFPNDAVIGPDGNLYVSDTGNNRIQVYTINGEFIETLNNE 255
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
PRGI GP + VA + + V G +FG E P+ IA+ +
Sbjct: 256 PLFSPRGIIFGPRGQLYVATKITNDITVLDETGRVTERFGQ-----DLFELPNGIALDDN 310
Query: 156 NRVIVSDSNNHRVQIFD 172
+ V+D V IFD
Sbjct: 311 GFLYVTDY--LSVSIFD 325
>gi|260792740|ref|XP_002591372.1| hypothetical protein BRAFLDRAFT_93992 [Branchiostoma floridae]
gi|229276577|gb|EEN47383.1| hypothetical protein BRAFLDRAFT_93992 [Branchiostoma floridae]
Length = 674
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 121 VQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQS 180
++V+ +G K L +P +AV R++V+D + Q
Sbjct: 494 IRVYSREGKLTKTL-----KPDCLWNPCGVAVLQDGRIVVTDYTQQCCFLL-------QP 541
Query: 181 DGTFVGKFGSMGNKAGQLEHPHYIAVSNT-NRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
DG+ + G GQL+HP +IAV + + + V+D H+V +FD+ G++ SFG G
Sbjct: 542 DGSLIRDIGK-----GQLQHPQFIAVDKSRDMLFVTDYLAHKVFVFDLEGKLKFSFGKLG 596
Query: 240 SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRA 281
+EGQL P G+ VD G I V + + R+Q+F PDG +LR
Sbjct: 597 QDEGQLYHPTGITVDPAGNIVVVNERDRRLQVFGPDGTYLRT 638
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 19/183 (10%)
Query: 47 SRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF---PHFDLKTNCVFLAFTWPRGI 103
++ +P C P G+AV D IVV D + Q CF P L + P+ I
Sbjct: 504 TKTLKPDCLWNPCGVAVLQDGRIVVTDYTQ---QCCFLLQPDGSLIRDIGKGQLQHPQFI 560
Query: 104 AVGPDNSIV-VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
AV ++ V D H+V VF +G FG +G GQL HP I V ++V +
Sbjct: 561 AVDKSRDMLFVTDYLAHKVFVFDLEGKLKFSFGKLGQDEGQLYHPTGITVDPAGNIVVVN 620
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
+ R+Q+F +G ++ T G+ P IA++ N + V+ V
Sbjct: 621 ERDRRLQVFGPDGTYLRTVTTVKGRC------------PQRIALTPDNHIAVACYMGDCV 668
Query: 223 QIF 225
+++
Sbjct: 669 ELY 671
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 46/221 (20%)
Query: 116 SSNHRVQV---------------FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
+ NHR++V QS T V G G G+L P +AV
Sbjct: 438 TGNHRLEVNVNGGSVAGSPFEVRVQSRDTPVLTIGRWGLGEGELSFPTDVAV-------- 489
Query: 161 SDSNNHRVQIFDVNG-RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
D++ RV+ +G K L +P +AV R++V+D
Sbjct: 490 -----------DMDAIRVYSREGKLTKTL-----KPDCLWNPCGVAVLQDGRIVVTDYTQ 533
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIFTPDGQF 278
+ +G +I G +GQL+ P+ +AVD + + V D +++ +F +G+
Sbjct: 534 QCCFLLQPDGSLIRDIG-----KGQLQHPQFIAVDKSRDMLFVTDYLAHKVFVFDLEGKL 588
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+FG G +G+ G+ V GNI+V + + R+QVF
Sbjct: 589 KFSFGKLGQDEGQLYHPTGITVDPAGNIVVVNERDRRLQVF 629
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+L+F G G + G P GI V P +IVV + + R+QV P +
Sbjct: 587 KLKFSFGKLGQDEGQLYHPTGITVDPAGNIVVVNERDRRLQVFGPDGTYLRTVTTVKGRC 646
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+ IA+ PDN I VA V++++
Sbjct: 647 PQRIALTPDNHIAVACYMGDCVELYR 672
>gi|260794846|ref|XP_002592418.1| hypothetical protein BRAFLDRAFT_67284 [Branchiostoma floridae]
gi|229277637|gb|EEN48429.1| hypothetical protein BRAFLDRAFT_67284 [Branchiostoma floridae]
Length = 641
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 137/317 (43%), Gaps = 83/317 (26%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPH-FDLKTNCVFLA-------FTWPRGIAVGPDN 109
PR ++V P SN RV++C FDL+ F F P G+AV +
Sbjct: 350 PRSLSVSP---------SNTRVKLCRRRSFDLQ-KVTFGGKGSEAGRFDVPCGVAVSDEG 399
Query: 110 SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV----------------- 152
I VAD NHR+QVF GTFV +F ++ ++ ++ P +A+
Sbjct: 400 EIFVADCGNHRIQVFTLGGTFVREFPTVLSEDRTIQ-PDDVAMDADDYLWVVGVDVAAQY 458
Query: 153 ------------------------SNTNRVIVSDSNNHR------VQIFDVNGRVFQSDG 182
+ N V+VS + + VQIF G V ++ G
Sbjct: 459 TKFGTLLSAVDLRNTGWDRGVAMDTRKNNVLVSQTTIDKRDIVGEVQIFSAEGNVVKTVG 518
Query: 183 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
G G +++P YI V ++VSD+ +H V I + G ++ FG EG E
Sbjct: 519 ------GQQG-----MKNPAYITVDTKGNILVSDNVSHYVYILNHVGYLLLKFGGEGGGE 567
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMS 302
GQLK P G+ D G I V D+ N+R+++F G ++R +G VA+ +
Sbjct: 568 GQLKCPSGICTDSSGNIIVADTHNSRVELFDKTGSWVRHVATG------MRGPLAVAMAT 621
Query: 303 NGNILVCDRENHRIQVF 319
G ++V D ++ + +F
Sbjct: 622 EGQLVVTDSSDNTVTIF 638
>gi|260826065|ref|XP_002607986.1| hypothetical protein BRAFLDRAFT_213563 [Branchiostoma floridae]
gi|229293336|gb|EEN63996.1| hypothetical protein BRAFLDRAFT_213563 [Branchiostoma floridae]
Length = 235
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 111/231 (48%), Gaps = 17/231 (7%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV------CFPHFDLKTNCV 93
R F GS GSEPG P G+ +++I+VAD +NHRV + H KT
Sbjct: 9 RHLFTCGSPGSEPGQLKNPHGVITDSEDNIIVADCNNHRVSLFSRDGTFIRHVLTKTEHG 68
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
GIAV I+V + H+V G + +FG +AV+
Sbjct: 69 LNDRCRTTGIAVDGLGRIIV--TIGHQVFKLSPSGDVMIRFGGEDQGQQYFGSSLRVAVN 126
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+ N++IVSD N ++ +FD +GR + GS G+ G+L +P + + + +I
Sbjct: 127 SRNQIIVSDWCNSKMMMFDPSGR-------HLFTCGSRGSGPGKLNNPFCVITDSEDNII 179
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDS 264
VSD NNHRV +F +G I +E +E G L P G+A+ G++ V +S
Sbjct: 180 VSDWNNHRVSLFSRDGTFIRHVLTE-TEHG-LGGPMGLALTCDGHLIVSES 228
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 121 VQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQS 180
++ F G + GS G++ GQL++PH + + + +IV+D NNHRV + F
Sbjct: 1 IKKFDPSGRHLFTCGSPGSEPGQLKNPHGVITDSEDNIIVADCNNHRVSL-------FSR 53
Query: 181 DGTFVGKFGSMGNKAGQLEH-------PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVIT 233
DGTF + + + EH IAV R+IV+ H+V +G V+
Sbjct: 54 DGTF------IRHVLTKTEHGLNDRCRTTGIAVDGLGRIIVTIG--HQVFKLSPSGDVMI 105
Query: 234 SFGSEGSEEGQLKFPRG--VAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGE 291
FG G ++GQ F VAV+ + I V D N+++ +F P G+ L G GSG G+
Sbjct: 106 RFG--GEDQGQQYFGSSLRVAVNSRNQIIVSDWCNSKMMMFDPSGRHLFTCGSRGSGPGK 163
Query: 292 FKGLEGVAVMSNGNILVCDRENHRIQVF 319
V S NI+V D NHR+ +F
Sbjct: 164 LNNPFCVITDSEDNIIVSDWNNHRVSLF 191
>gi|386722458|ref|YP_006188784.1| copper amine oxidase domain-containing protein [Paenibacillus
mucilaginosus K02]
gi|384089583|gb|AFH61019.1| copper amine oxidase domain-containing protein [Paenibacillus
mucilaginosus K02]
Length = 537
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 135/333 (40%), Gaps = 72/333 (21%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNH--------RVQVC-----------FP---HFDLKTN 91
F P G+AV PD + V+DS N RV V +P D N
Sbjct: 64 SFRVPAGLAVLPDGTAAVSDSRNGVIRKLTGGRVDVLAGVFYRKDDKGYPVGGLLDGAAN 123
Query: 92 CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDG--TFVGKFGSMGNK-----AGQL 144
F P G++ GPD S+ VAD+ NH ++ + G T V G +G K A +
Sbjct: 124 ASL--FQEPLGLSAGPDGSLYVADAGNHAIRRIDAKGNVTTVAGSGRLGVKDGKGAAAEF 181
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG----------RVFQSDGTFVGKFGSMGN- 193
P +A + + V+D+ H ++ G RV ++ V G +
Sbjct: 182 YRPGDVAAAPDGTLYVADTLGHTIRRISPQGEVTTLTAPSKRVVEATPGQVAAAGDFADG 241
Query: 194 --KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSE---------- 241
+ P IA+ + VSDS N RV+ D+ +T+ G+
Sbjct: 242 PLAQAKFNEPTGIALDAKGNLYVSDSGNQRVRYIDLAKGTVTTVAGGGTAAELKDMYVPG 301
Query: 242 --------EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+ +L +P G+AV ++G + + DS N+ ++ + GQ G G
Sbjct: 302 GFSNGAALQARLNYPMGIAVTEEGGLLIADSQNHAVR-YLFGGQLTTLAGAGEQKTGLLD 360
Query: 294 GLEG---------VAVMSNGNILVCDRENHRIQ 317
G+EG VAV+ +G++LV D N+R++
Sbjct: 361 GMEGKAGLNRPADVAVLGDGSVLVADSFNNRLR 393
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 112/276 (40%), Gaps = 61/276 (22%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA----------------F 97
F P G++ GPD S+ VAD+ NH ++ D K N +A F
Sbjct: 126 LFQEPLGLSAGPDGSLYVADAGNHAIR----RIDAKGNVTTVAGSGRLGVKDGKGAAAEF 181
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV--------------GKFGSMGNKA-- 141
P +A PD ++ VAD+ H ++ G G+ + G+ A
Sbjct: 182 YRPGDVAAAPDGTLYVADTLGHTIRRISPQGEVTTLTAPSKRVVEATPGQVAAAGDFADG 241
Query: 142 ----GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV----------NGRVFQSDGTFV-G 186
+ P IA+ + VSDS N RV+ D+ G + +V G
Sbjct: 242 PLAQAKFNEPTGIALDAKGNLYVSDSGNQRVRYIDLAKGTVTTVAGGGTAAELKDMYVPG 301
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS--------E 238
F + +L +P IAV+ ++++DS NH V+ G++ T G+ +
Sbjct: 302 GFSNGAALQARLNYPMGIAVTEEGGLLIADSQNHAVRYL-FGGQLTTLAGAGEQKTGLLD 360
Query: 239 GSE-EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
G E + L P VAV G + V DS NNR++ T
Sbjct: 361 GMEGKAGLNRPADVAVLGDGSVLVADSFNNRLRRLT 396
>gi|260806498|ref|XP_002598121.1| hypothetical protein BRAFLDRAFT_85661 [Branchiostoma floridae]
gi|229283392|gb|EEN54133.1| hypothetical protein BRAFLDRAFT_85661 [Branchiostoma floridae]
Length = 937
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 132/279 (47%), Gaps = 36/279 (12%)
Query: 34 QYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV 93
+Y + +++ F G RG EPG F G+AV DN + V D SN+RVQV F++ +
Sbjct: 312 RYRKMQKITF--GGRGKEPGKFRENNGVAVSADNEVFVTDLSNNRVQV----FNMNGTYL 365
Query: 94 FLAFT---------WPRGIA--VGPDNSIVVAD----SSNHRVQVFQSDGTFVGKFGSMG 138
L T +P +A V P VV S++ V ++ DG + KF
Sbjct: 366 RLFPTVVPGESGRIYPFSVAIDVKPGYLWVVGGKVIFSADAHVVQYRRDGLPIKKFDV-- 423
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
Q+ P + N+VIV + + FQ + V F ++G + +
Sbjct: 424 RFLNQIPQPRIAIDARNNKVIVGEGQTIMM---------FQPNVFLVRSFKALGKE--RS 472
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
H + N ++++D + VQ++ +G I +FGS G +EG+L FP+ + + G+
Sbjct: 473 VGIHGVMSDNDGNILLTDYVS--VQVYSHSGNKIFTFGSFGHQEGRLIFPKDICITPMGH 530
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
I V +SGNNR+ +FT G+F+R + G GL+G
Sbjct: 531 IIVANSGNNRVDMFTSHGEFVRTVANITNPWGLTMGLDG 569
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 27/227 (11%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM-GNKAGQLE--------HPHYIAV 152
G+AV DN + V D SN+RVQVF +GT++ F ++ ++G++ P Y+ V
Sbjct: 336 GVAVSADNEVFVTDLSNNRVQVFNMNGTYLRLFPTVVPGESGRIYPFSVAIDVKPGYLWV 395
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
+ +D+ H VQ ++ DG + KF Q+ P + N+V
Sbjct: 396 VGGKVIFSADA--HVVQ--------YRRDGLPIKKFDV--RFLNQIPQPRIAIDARNNKV 443
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
IV + + +F N ++ SF + G E GV D+ G I + D + +Q++
Sbjct: 444 IVGEGQT--IMMFQPNVFLVRSFKALGKERSVGI--HGVMSDNDGNILLTDYVS--VQVY 497
Query: 273 TPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ G + FG +G +G + + + G+I+V + N+R+ +F
Sbjct: 498 SHSGNKIFTFGSFGHQEGRLIFPKDICITPMGHIIVANSGNNRVDMF 544
>gi|384208589|ref|YP_005594309.1| NHL repeat containing protein [Brachyspira intermedia PWS/A]
gi|343386239|gb|AEM21729.1| NHL repeat containing protein [Brachyspira intermedia PWS/A]
Length = 716
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 14/207 (6%)
Query: 126 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVF------- 178
S+ ++ F + N + P I V + V D ++ ++ FD+NGR+
Sbjct: 143 SNFIYLKAFSTNLNFRKNINQPIQIKVMADGSLYVLDYSDSSLKKFDINGRLIGKIAHGK 202
Query: 179 ------QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
S V +F + +LE+P + + + ++++ ++ +D N I
Sbjct: 203 RLEKQQTSWWKNVLQFVAKVYPYEKLENPRGFDIDSNGYIYIANTKKDKILKYDSNHNYI 262
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
T+ G G GQL P VAVD +G I V D+GNNRI +F +G FL +FG G +GEF
Sbjct: 263 TNIGVTGVSNGQLLGPSAVAVDKEGNIYVSDTGNNRIVVFDVEGNFLYSFGKLGENNGEF 322
Query: 293 KGLEGVAVMSNGNILVCDRENHRIQVF 319
G+AV ++ I V D N RIQ F
Sbjct: 323 FSPAGIAV-NDQYIYVADMGNKRIQQF 348
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 18/220 (8%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
PRG + + I +A++ ++ + S+ ++ G G GQL P +AV +
Sbjct: 231 PRGFDIDSNGYIYIANTKKDKILKYDSNHNYITNIGVTGVSNGQLLGPSAVAVDKEGNIY 290
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
VSD+ N+R+ +FDV +G F+ FG +G G+ P IAV N + V+D N
Sbjct: 291 VSDTGNNRIVVFDV-------EGNFLYSFGKLGENNGEFFSPAGIAV-NDQYIYVADMGN 342
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
R+Q FD++G I + E PRG++ G + + D ++F D
Sbjct: 343 KRIQQFDLSGNYIQTIKHNLFNE-----PRGLSFARDGNLYIADGS----KVFYYD-IVE 392
Query: 280 RAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F + + + VA NGNI + D + RI V+
Sbjct: 393 SEFTIFNNSERYTVTPTSVAESPNGNIYLTDFMSGRIDVY 432
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 93/244 (38%), Gaps = 36/244 (14%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--------- 95
IG G G P +AV + +I V+D+ N+R+ V FD++ N ++
Sbjct: 265 IGVTGVSNGQLLGPSAVAVDKEGNIYVSDTGNNRIVV----FDVEGNFLYSFGKLGENNG 320
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GIAV D I VAD N R+Q F G ++ K P ++ +
Sbjct: 321 EFFSPAGIAVN-DQYIYVADMGNKRIQQFDLSGNYIQTI-----KHNLFNEPRGLSFARD 374
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+ ++D +VF D +F N P +A S + ++
Sbjct: 375 GNLYIADG-----------SKVFYYD-IVESEFTIFNNSERYTVTPTSVAESPNGNIYLT 422
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D + R+ ++ + E KFP VA ++V D N + TP+
Sbjct: 423 DFMSGRIDVYTRKEEYYANLDVFVDREYLNKFPVVVAS-----VTVRDRAMNPVVGLTPE 477
Query: 276 GQFL 279
F+
Sbjct: 478 NFFV 481
>gi|196229792|ref|ZP_03128656.1| NHL repeat containing protein [Chthoniobacter flavus Ellin428]
gi|196226118|gb|EDY20624.1| NHL repeat containing protein [Chthoniobacter flavus Ellin428]
Length = 320
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 97 FTWPRGIAVGPDNSIVVADS-SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P +AV PD S V+D N RV F + G + ++G G + G+ PH +AV +
Sbjct: 143 FNLPTDVAVLPDGSFYVSDGYRNTRVVKFDAAGHYQFEWGGKGTEPGKFRLPHGVAVDSH 202
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
RV V D N R+Q+FD G+ F+ ++ K Q+ P+ ++V+ + V V
Sbjct: 203 GRVFVCDRTNSRLQVFDPKGK-------FLAEW-----KGPQVGRPYGVSVAANDHVFVI 250
Query: 216 DSNNH--------RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
D + + D G V+ FGS G + GQ + +AV G + VGD+
Sbjct: 251 DGGDQLPNQPEHAKAVELDPEGNVVPRFGSYGRDPGQFQLGHDIAVAPDGSVYVGDAKGK 310
Query: 268 RIQIFTP 274
R+Q F P
Sbjct: 311 RVQKFVP 317
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV---GKFGSMGNKAGQLEHPHYIAVS 153
F P G+ + ++++ + D +V + DG + G+ G G+ P +AV
Sbjct: 93 FIMPHGLTLDREDNVWLTDVGRQQVFKYAHDGHLLLTLGERGVAGSDQTHFNLPTDVAVL 152
Query: 154 NTNRVIVSDS-NNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
VSD N RV FD G + ++G G + G+ PH +AV + RV
Sbjct: 153 PDGSFYVSDGYRNTRVVKFDAAGH-------YQFEWGGKGTEPGKFRLPHGVAVDSHGRV 205
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN----- 267
V D N R+Q+FD G+ + + +G + G+ P GV+V ++ V D G+
Sbjct: 206 FVCDRTNSRLQVFDPKGKFLAEW--KGPQVGR---PYGVSVAANDHVFVIDGGDQLPNQP 260
Query: 268 ---RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ P+G + FG +G G+F+ +AV +G++ V D + R+Q F
Sbjct: 261 EHAKAVELDPEGNVVPRFGSYGRDPGQFQLGHDIAVAPDGSVYVGDAKGKRVQKF 315
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
AG+ PH + + + V ++D +V + +G + + +G+ G G+
Sbjct: 90 AGEFIMPHGLTLDREDNVWLTDVGRQQVFKYAHDGHLLLT----LGERGVAGSDQTHFNL 145
Query: 201 PHYIAVSNTNRVIVSDS-NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYI 259
P +AV VSD N RV FD G +G +G+E G+ + P GVAVD G +
Sbjct: 146 PTDVAVLPDGSFYVSDGYRNTRVVKFDAAGHYQFEWGGKGTEPGKFRLPHGVAVDSHGRV 205
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE-----GVAVMSNGNILVCD 310
V D N+R+Q+F P G+FL E+KG + GV+V +N ++ V D
Sbjct: 206 FVCDRTNSRLQVFDPKGKFL----------AEWKGPQVGRPYGVSVAANDHVFVID 251
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 34 QYLQKRRLQFKIGSRG---SEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP---HFD 87
+Y L +G RG S+ F P +AV PD S V+D + V F H+
Sbjct: 119 KYAHDGHLLLTLGERGVAGSDQTHFNLPTDVAVLPDGSFYVSDGYRNTRVVKFDAAGHYQ 178
Query: 88 LK---TNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQL 144
+ F P G+AV + V D +N R+QVF G F+ ++ K Q+
Sbjct: 179 FEWGGKGTEPGKFRLPHGVAVDSHGRVFVCDRTNSRLQVFDPKGKFLAEW-----KGPQV 233
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRV-QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
P+ ++V+ + V V D + Q +G V +FGS G GQ + H
Sbjct: 234 GRPYGVSVAANDHVFVIDGGDQLPNQPEHAKAVELDPEGNVVPRFGSYGRDPGQFQLGHD 293
Query: 204 IAVSNTNRVIVSDSNNHRVQIF 225
IAV+ V V D+ RVQ F
Sbjct: 294 IAVAPDGSVYVGDAKGKRVQKF 315
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 195 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG---SEEGQLKFPRGV 251
AG+ PH + + + V ++D +V + +G ++ + G G S++ P V
Sbjct: 90 AGEFIMPHGLTLDREDNVWLTDVGRQQVFKYAHDGHLLLTLGERGVAGSDQTHFNLPTDV 149
Query: 252 AVDDQGYISVGDS-GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
AV G V D N R+ F G + +G G+ G+F+ GVAV S+G + VCD
Sbjct: 150 AVLPDGSFYVSDGYRNTRVVKFDAAGHYQFEWGGKGTEPGKFRLPHGVAVDSHGRVFVCD 209
Query: 311 RENHRIQVF 319
R N R+QVF
Sbjct: 210 RTNSRLQVF 218
>gi|260792412|ref|XP_002591209.1| hypothetical protein BRAFLDRAFT_105410 [Branchiostoma floridae]
gi|229276412|gb|EEN47220.1| hypothetical protein BRAFLDRAFT_105410 [Branchiostoma floridae]
Length = 800
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 123/273 (45%), Gaps = 33/273 (12%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVC------FPHFDLKTNCVFLAFTWPRGIAVG 106
G ++ RG+AV DN I VAD + R+QV F + PR +++
Sbjct: 538 GSLSYARGVAVSSDNRIWVADQNKARLQVYNMEGVYLYQFPRGAPGLGYPSKEPRDVSID 597
Query: 107 PDNSIVVADS-----SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
D + V S + VQ F DG F G GQ + + N NR++V+
Sbjct: 598 RDGHLWVLMSGYPACPDSLVQ-FGRDGHLKANFDLPGTVPGQSYKGMAVDLRN-NRILVT 655
Query: 162 DSNNHR--VQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
S+ + +Q F+ +G++ SD VG+ ++ P Y+AV VSD
Sbjct: 656 WSDGMKGGMQAFNPDGKLLWSD---VGR--------AWMKAPKYVAVDREGNSFVSDYGT 704
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ-GYISVGDSGNNRIQIFTPDGQF 278
H + +D +GR +++FG G G+L PRG+ VD Q +I V DS N R+ ++T G +
Sbjct: 705 HSIYKYDESGRYVSTFGGPGRSGGRLNRPRGICVDSQSSHIVVVDSRNQRVVVYTSQGAY 764
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDR 311
+R GVAV G ++V ++
Sbjct: 765 VRHIAL------RIAHPRGVAVGQRGELVVANK 791
>gi|195400733|ref|XP_002058970.1| GJ15250 [Drosophila virilis]
gi|194141622|gb|EDW58039.1| GJ15250 [Drosophila virilis]
Length = 1180
Score = 87.4 bits (215), Expect = 7e-15, Method: Composition-based stats.
Identities = 50/127 (39%), Positives = 70/127 (55%), Gaps = 8/127 (6%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
KFGS+G GQ PH + +IV+D+NNHR+++FD G + FG G EEGQL
Sbjct: 913 KFGSLGTAKGQFNSPHGFCLGVDEEIIVADTNNHRIEVFDKMGALKFQFGVAGKEEGQLW 972
Query: 247 FPRGVAV-DDQGYISVGDSGN--NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN 303
+PR VAV + G V D GN +R+QIF+ G F+R + G+AV +
Sbjct: 973 YPRKVAVMHNNGKFVVCDRGNERSRMQIFSKCGHFMRKIAI-----RYIDIVAGLAVTAK 1027
Query: 304 GNILVCD 310
G+I+ D
Sbjct: 1028 GHIVAVD 1034
Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 22/191 (11%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV-FQSDGTFVGKFGSM 191
KFGS+G GQ PH + +IV+D+NNHR+++FD G + FQ FG
Sbjct: 913 KFGSLGTAKGQFNSPHGFCLGVDEEIIVADTNNHRIEVFDKMGALKFQ--------FGVA 964
Query: 192 GNKAGQLEHPHYIAVSNTN-RVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFP 248
G + GQL +P +AV + N + +V D N R+QIF G + +
Sbjct: 965 GKEEGQLWYPRKVAVMHNNGKFVVCDRGNERSRMQIFSKCGHFMRKIAIR-----YIDIV 1019
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
G+AV +G+I DS + + + + +G+ +R F C + +A+ N + V
Sbjct: 1020 AGLAVTAKGHIVAVDSVSPTVFVISEEGELVRWFDC----SDYMREPSDIAIRDN-DFYV 1074
Query: 309 CDRENHRIQVF 319
CD + H + VF
Sbjct: 1075 CDFKGHCVAVF 1085
Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 68/259 (26%), Positives = 108/259 (41%), Gaps = 44/259 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G +G D I+VAD++NHR++VF G +FG G + GQL +P +AV + N
Sbjct: 924 FNSPHGFCLGVDEEIIVADTNNHRIEVFDKMGALKFQFGVAGKEEGQLWYPRKVAVMHNN 983
Query: 157 -RVIVSDSNNH--RVQIFD----------------VNGRVFQSDGTFV------------ 185
+ +V D N R+QIF V G + G V
Sbjct: 984 GKFVVCDRGNERSRMQIFSKCGHFMRKIAIRYIDIVAGLAVTAKGHIVAVDSVSPTVFVI 1043
Query: 186 ---GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
G+ + + + P IA+ + N V D H V +F +G + G+E
Sbjct: 1044 SEEGELVRWFDCSDYMREPSDIAIRD-NDFYVCDFKGHCVAVFQEDGTFLYRIGNEKVT- 1101
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNRIQI--FTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
FP G+ + + G + +GDS NR + ++ +G F C GL+ +
Sbjct: 1102 ---CFPNGIDISNAGDVLIGDSHGNRFHVACYSREGALQSEFECPHVKVSRCCGLK---I 1155
Query: 301 MSNGNILVCDRENHRIQVF 319
S G ++ + NH + V
Sbjct: 1156 TSEGYVVTLAKNNHHVLVL 1174
>gi|340376422|ref|XP_003386731.1| PREDICTED: hypothetical protein LOC100636874 [Amphimedon
queenslandica]
Length = 3040
Score = 87.4 bits (215), Expect = 8e-15, Method: Composition-based stats.
Identities = 77/271 (28%), Positives = 119/271 (43%), Gaps = 46/271 (16%)
Query: 52 PGCF-TWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV--------FLAFTWPRG 102
P C +P +AV DN ++V + ++ C D + V + F +PRG
Sbjct: 2789 PECLRVYPWAVAVTDDNHVIVTECYDN----CVTILDREGKKVKSLGEESGNVKFCFPRG 2844
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVS 161
IA PD I+V+DS+ R+Q DG V G G Q + P +A+S T ++ V+
Sbjct: 2845 IAFTPDKFILVSDSN--RIQKISIDGYLVALVGEEGEGPLQFKMPTGLAISPETGKIYVA 2902
Query: 162 DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 221
DS N R + GQ + PH IA+ + V V+++N R
Sbjct: 2903 DSGNCR-------------------------SANGQFKAPHDIAIDSQGLVYVTEANC-R 2936
Query: 222 VQIFDVNGRVITSFGSEGSEEGQLKF-PRGVAVD--DQGYISVGDSGNNRIQIFTPDGQF 278
+Q F +G + F EGS GQ K P +A+D D G + V ++RI + +G
Sbjct: 2937 IQKFSPSGEFVGQFDIEGSRPGQQKSSPYSIAIDTADTGLVYVTKEDSDRITVLDSEGVL 2996
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
+FG G + L +A +G + VC
Sbjct: 2997 KCSFGTAGERYYD-SSLTSLAFDKDGLLYVC 3026
Score = 80.5 bits (197), Expect = 1e-12, Method: Composition-based stats.
Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 37/227 (16%)
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH--PHYIAVSNTN 156
+P +AV DN ++V + ++ V + +G K S+G ++G ++ P IA +
Sbjct: 2795 YPWAVAVTDDNHVIVTECYDNCVTILDREGK---KVKSLGEESGNVKFCFPRGIAFTPDK 2851
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVS 215
++VSDSN R+Q + DG V G G Q + P +A+S T ++ V+
Sbjct: 2852 FILVSDSN--RIQKISI-------DGYLVALVGEEGEGPLQFKMPTGLAISPETGKIYVA 2902
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
DS N R S GQ K P +A+D QG + V ++ N RIQ F+P
Sbjct: 2903 DSGNCR------------------SANGQFKAPHDIAIDSQGLVYVTEA-NCRIQKFSPS 2943
Query: 276 GQFLRAFGCWGSGDGEFKGLE---GVAVMSNGNILVCDRENHRIQVF 319
G+F+ F GS G+ K + G + V ++ RI V
Sbjct: 2944 GEFVGQFDIEGSRPGQQKSSPYSIAIDTADTGLVYVTKEDSDRITVL 2990
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 99/211 (46%), Gaps = 47/211 (22%)
Query: 44 KIGSRGSEPGC--FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA----- 96
K+ S G E G F +PRGIA PD I+V+DS+ R+Q + V L
Sbjct: 2826 KVKSLGEESGNVKFCFPRGIAFTPDKFILVSDSN--RIQ----KISIDGYLVALVGEEGE 2879
Query: 97 ----FTWPRGIAVGPDN-SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
F P G+A+ P+ I VADS N R + GQ + PH IA
Sbjct: 2880 GPLQFKMPTGLAISPETGKIYVADSGNCR------------------SANGQFKAPHDIA 2921
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE-HPHYIAV--SN 208
+ + V V+++N R+Q F G FVG+F G++ GQ + P+ IA+ ++
Sbjct: 2922 IDSQGLVYVTEANC-RIQ-------KFSPSGEFVGQFDIEGSRPGQQKSSPYSIAIDTAD 2973
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGSEG 239
T V V+ ++ R+ + D G + SFG+ G
Sbjct: 2974 TGLVYVTKEDSDRITVLDSEGVLKCSFGTAG 3004
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 25/154 (16%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDN-SIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGI 103
+G G P F P G+A+ P+ I VADS N R N F A P I
Sbjct: 2874 VGEEGEGPLQFKMPTGLAISPETGKIYVADSGNCR----------SANGQFKA---PHDI 2920
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE-HPHYIAV--SNTNRVIV 160
A+ + V ++ N R+Q F G FVG+F G++ GQ + P+ IA+ ++T V V
Sbjct: 2921 AIDSQGLVYVTEA-NCRIQKFSPSGEFVGQFDIEGSRPGQQKSSPYSIAIDTADTGLVYV 2979
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK 194
+ ++ R+ + D S+G FG+ G +
Sbjct: 2980 TKEDSDRITVLD-------SEGVLKCSFGTAGER 3006
>gi|290991245|ref|XP_002678246.1| predicted protein [Naegleria gruberi]
gi|284091857|gb|EFC45502.1| predicted protein [Naegleria gruberi]
Length = 246
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 125/265 (47%), Gaps = 38/265 (14%)
Query: 69 IVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVA-DSSNHRVQVFQSD 127
I V+DS ++R+ V FDLKT +FT G + ++++ DSS+ + F +
Sbjct: 5 IFVSDSGSNRIMV----FDLKTKKFIQSFT-------GITSPLMISIDSSDQKYIYFSNM 53
Query: 128 GTFVGKFGSMGNK-----AGQLEHPHYIAVSNT--NRVIVSDSNNHRVQIFDVNGRVFQS 180
VGK+ K + L HP I N+ R+ VSD +N+ ++ +
Sbjct: 54 NNQVGKYDIEQKKIIWETSQNLRHPSGIVADNSIDGRLYVSDCSNNEIKCLS------KQ 107
Query: 181 DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV---NGRVITSFGS 237
DG + FG+ + P + ++ +IV+ H + + ++ SFG
Sbjct: 108 DGKLISSFGA-------CKFPFGLEINTDGDLIVTSLATHTISVISKVLEKKQIYFSFGK 160
Query: 238 EGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGS-GDGEFKGL 295
+G + ++PRGV V+ GYI + D N+RI +F G F+++FG GS G FK
Sbjct: 161 KGVGLHEFQYPRGVFVEKLSGYIYICDQSNSRIHVFDNFGSFIQSFGEIGSTGKSHFKFP 220
Query: 296 EGVAVM-SNGNILVCDRENHRIQVF 319
G+ + S G + V D N RIQVF
Sbjct: 221 TGLCISESRGELFVADTHNKRIQVF 245
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 20/121 (16%)
Query: 19 LLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGP-DNSIVVADSSNH 77
L+V+ + + S+ L+K+++ F G +G F +PRG+ V I + D SN
Sbjct: 132 LIVTSLATHTISVISKVLEKKQIYFSFGKKGVGLHEFQYPRGVFVEKLSGYIYICDQSNS 191
Query: 78 RVQVCFPHFDLKTNCVFLA------------FTWPRGIAVGPDN-SIVVADSSNHRVQVF 124
R+ V F +F F+ F +P G+ + + VAD+ N R+QVF
Sbjct: 192 RIHV-FDNFG-----SFIQSFGEIGSTGKSHFKFPTGLCISESRGELFVADTHNKRIQVF 245
Query: 125 Q 125
+
Sbjct: 246 R 246
>gi|86610239|ref|YP_479001.1| NHL repeat-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558781|gb|ABD03738.1| NHL repeat protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 649
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 121/285 (42%), Gaps = 38/285 (13%)
Query: 60 GIAVGPDNSIVVADSSNHRVQVCFPHFDLKT------------NCVFLAFTWPRGIAVGP 107
GIAV P+ + +AD + HR+ P +L+ F P+G+ P
Sbjct: 344 GIAVDPEGAFYLADRAQHRIFRLSPEGELEVWAGTGQAGRRDGAANQAQFDSPQGLLWDP 403
Query: 108 DNSIVVADSSNH-------RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
+ VADS NH + QV GT + + G Q P +A+ + + V
Sbjct: 404 KGGLWVADSGNHCLRYINLQRQVSTFAGTCIAGYRDGGLDRAQFREPSGLALGSDGSLYV 463
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA--GQLEHPHYIAVSNTNRVIVSDSN 218
+D N R++ G V GT G+ GS+ A QL P +AV + ++D
Sbjct: 464 ADRANRRIRRITPAGEVTTVAGT--GQPGSVDGPAEQAQLLQPTALAVDKEGNLWIAD-- 519
Query: 219 NHRVQIFDVNGRVITSFGSE-GSEEGQLKFPR-----GVAVDDQGYISVGDSGNNRIQIF 272
HR++ GRV T G+E G +G L R G+A D G + V D N+RI+
Sbjct: 520 GHRLRRLSAGGRVTTLSGAEPGYRDGPLAEARFQTLGGLAFDAAGNLWVADRDNHRIRRL 579
Query: 273 TPDGQFLRAFG----CWGSGD---GEFKGLEGVAVMSNGNILVCD 310
P GQ G W G F G+AV+ +G+++V D
Sbjct: 580 QPGGQVSTLAGQNQPGWQDGPTSVARFDQPAGLAVLPDGSVVVVD 624
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 24/237 (10%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTF--------VGKFGSMGNKAGQLEHPHYIAVS 153
GIAV P+ + +AD + HR+ +G G+ N+A Q + P +
Sbjct: 344 GIAVDPEGAFYLADRAQHRIFRLSPEGELEVWAGTGQAGRRDGAANQA-QFDSPQGLLWD 402
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+ V+DS NH ++ ++ +V GT + + G Q P +A+ + +
Sbjct: 403 PKGGLWVADSGNHCLRYINLQRQVSTFAGTCIAGYRDGGLDRAQFREPSGLALGSDGSLY 462
Query: 214 VSDSNNHRVQIFDVNGRVITSFGS--EGS-----EEGQLKFPRGVAVDDQGYISVGDSGN 266
V+D N R++ G V T G+ GS E+ QL P +AVD +G + + D
Sbjct: 463 VADRANRRIRRITPAGEVTTVAGTGQPGSVDGPAEQAQLLQPTALAVDKEGNLWIAD--G 520
Query: 267 NRIQIFTPDGQFLRAFGCW-GSGDG-----EFKGLEGVAVMSNGNILVCDRENHRIQ 317
+R++ + G+ G G DG F+ L G+A + GN+ V DR+NHRI+
Sbjct: 521 HRLRRLSAGGRVTTLSGAEPGYRDGPLAEARFQTLGGLAFDAAGNLWVADRDNHRIR 577
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 99/246 (40%), Gaps = 47/246 (19%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA----------------FT 98
F P+G+ P + VADS NH C + +L+ A F
Sbjct: 393 FDSPQGLLWDPKGGLWVADSGNH----CLRYINLQRQVSTFAGTCIAGYRDGGLDRAQFR 448
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTF-----VGKFGSMGNKA--GQLEHPHYIA 151
P G+A+G D S+ VAD +N R++ G G+ GS+ A QL P +A
Sbjct: 449 EPSGLALGSDGSLYVADRANRRIRRITPAGEVTTVAGTGQPGSVDGPAEQAQLLQPTALA 508
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY-----IAV 206
V + ++D HR++ GRV G G + G L + +A
Sbjct: 509 VDKEGNLWIAD--GHRLRRLSAGGRVTTLSGA------EPGYRDGPLAEARFQTLGGLAF 560
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFG--SEGSEEGQLKF-----PRGVAVDDQGYI 259
+ V+D +NHR++ G+V T G G ++G P G+AV G +
Sbjct: 561 DAAGNLWVADRDNHRIRRLQPGGQVSTLAGQNQPGWQDGPTSVARFDQPAGLAVLPDGSV 620
Query: 260 SVGDSG 265
V D+G
Sbjct: 621 VVVDAG 626
>gi|357008076|ref|ZP_09073075.1| copper amine oxidase domain-containing protein [Paenibacillus elgii
B69]
Length = 533
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 139/333 (41%), Gaps = 72/333 (21%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVC-------------------FP---HFDLKTN 91
F P G+ V D +++V+DS N ++ FP D K++
Sbjct: 64 SFRMPGGLTVLKDGTVLVSDSRNQLIRKLSQGTVSTFAGAAYKQDSKGFPVGALLDGKSD 123
Query: 92 CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDG--TFVGKFGSMGNKAGQ-----L 144
F P+G+A + ++ VADS NH ++ + G + V G +G K G+
Sbjct: 124 ASL--FNEPQGLAADANGNVYVADSGNHAIRKIDTAGQVSTVAGNGLLGRKDGEGKDALF 181
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV-------------FQSDGTFVGKFGSM 191
P +AV+ + V+DS NH ++ +G V F + G F
Sbjct: 182 YRPTDVAVAADGTLYVADSLNHAIRSISPSGEVKTLNALSPRVVELFPGQVSPAGDFADG 241
Query: 192 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN-GRVIT----------------- 233
K+ + P + + +IVSDS N R++ D+ G+V T
Sbjct: 242 DLKSAKFNEPTALVLDAKGNLIVSDSGNQRIRYIDLQQGKVTTLAGGGQAATNKELHVQG 301
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
F + + + FP G+A+ ++G + + DS N+ I+ + DGQ G G
Sbjct: 302 GFADGSASDARFSFPMGLALTEEGGLVIADSQNHAIR-YLLDGQVSTIAGAADRITGNAD 360
Query: 294 GLEG---------VAVMSNGNILVCDRENHRIQ 317
G+EG VAV+++G+IL D N++++
Sbjct: 361 GIEGSAALHRPMDVAVLADGSILAADTYNNKLR 393
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 125/313 (39%), Gaps = 65/313 (20%)
Query: 25 GQVGTTPRSQYLQKRRLQFKIGSR---GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV 81
G V T + Y Q + F +G+ S+ F P+G+A + ++ VADS NH ++
Sbjct: 95 GTVSTFAGAAYKQDSK-GFPVGALLDGKSDASLFNEPQGLAADANGNVYVADSGNHAIRK 153
Query: 82 CFPHFDLKT---NCVF---------LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGT 129
+ T N + F P +AV D ++ VADS NH ++ G
Sbjct: 154 IDTAGQVSTVAGNGLLGRKDGEGKDALFYRPTDVAVAADGTLYVADSLNHAIRSISPSGE 213
Query: 130 --------------FVGKFGSMGN------KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 169
F G+ G+ K+ + P + + +IVSDS N R++
Sbjct: 214 VKTLNALSPRVVELFPGQVSPAGDFADGDLKSAKFNEPTALVLDAKGNLIVSDSGNQRIR 273
Query: 170 IFDV-NGRVFQSDGT----------FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
D+ G+V G G F + P +A++ ++++DS
Sbjct: 274 YIDLQQGKVTTLAGGGQAATNKELHVQGGFADGSASDARFSFPMGLALTEEGGLVIADSQ 333
Query: 219 NHRVQIFDVNGRVITSFGS-----------EGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
NH ++ ++G+V T G+ EGS L P VAV G I D+ NN
Sbjct: 334 NHAIRYL-LDGQVSTIAGAADRITGNADGIEGS--AALHRPMDVAVLADGSILAADTYNN 390
Query: 268 RIQIFT----PDG 276
+++ + PDG
Sbjct: 391 KLREVSLYRLPDG 403
>gi|260811452|ref|XP_002600436.1| hypothetical protein BRAFLDRAFT_99626 [Branchiostoma floridae]
gi|229285723|gb|EEN56448.1| hypothetical protein BRAFLDRAFT_99626 [Branchiostoma floridae]
Length = 721
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 120/272 (44%), Gaps = 31/272 (11%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF----T 98
IG + S P +AV D +I V + N RVQ+ FD T F
Sbjct: 461 LSIGQKSSGVEELDGPLSVAVDKDGNIAVVERPNKRVQI----FDADTGQPLSTFPVDGE 516
Query: 99 WPRGIAVGPDNSIVVAD-SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P GI V + V N+ ++ + G K ++HP +AV R
Sbjct: 517 CPFGIDVDFTGRVFVTSFGDNYGIRCYSKKGK-----LLKTLKPDCIKHPLGVAVLKDGR 571
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT-NRVIVSD 216
++V+D + + + DG+ + + G GQL+ P Y++V + + +IV+D
Sbjct: 572 MVVADRTQK-------SCFLLKPDGSLIREIGK-----GQLQGPIYVSVKESRDMMIVTD 619
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
H+ +FD+ G++ FG +G +G+ K P GV VD +G I V + RIQ+F PDG
Sbjct: 620 GTAHKTFVFDLGGKLKIDFGKKGQIDGEFKSPAGVVVDRRGNIIVVNHSGGRIQMFGPDG 679
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
F+R +G G+ + +G I V
Sbjct: 680 TFIRTVTTVKAGSPN----HGITLTPDGYIAV 707
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 26/223 (11%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSD-GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P +AV D +I V + N RVQ+F +D G + F G E P I V T RV
Sbjct: 476 PLSVAVDKDGNIAVVERPNKRVQIFDADTGQPLSTFPVDG------ECPFGIDVDFTGRV 529
Query: 159 IVSD-SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
V+ +N+ ++ + G++ K ++HP +AV R++V+D
Sbjct: 530 FVTSFGDNYGIRCYSKKGKL------------LKTLKPDCIKHPLGVAVLKDGRMVVADR 577
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIFTPDG 276
+ +G +I G +GQL+ P V+V + + + V D ++ +F G
Sbjct: 578 TQKSCFLLKPDGSLIREIG-----KGQLQGPIYVSVKESRDMMIVTDGTAHKTFVFDLGG 632
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ FG G DGEFK GV V GNI+V + RIQ+F
Sbjct: 633 KLKIDFGKKGQIDGEFKSPAGVVVDRRGNIIVVNHSGGRIQMF 675
>gi|260823278|ref|XP_002604110.1| hypothetical protein BRAFLDRAFT_71602 [Branchiostoma floridae]
gi|229289435|gb|EEN60121.1| hypothetical protein BRAFLDRAFT_71602 [Branchiostoma floridae]
Length = 321
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 116/246 (47%), Gaps = 21/246 (8%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA 96
Q +R+ F G GS G F P G+ V + I VAD N R+QV F L+ V
Sbjct: 58 QPQRVTF--GGEGSGTGQFRDPFGVTVSDEGEIFVADRGNQRIQV----FTLQGTFVRQF 111
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRV--QVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
T G + + + N V ++ D FVG F NK G + + +
Sbjct: 112 PTVVSGEEKLKPDDVAMDGEGNLWVVGDLWGMDTDFVG-FAVQYNKQGTVLRKFDLQATG 170
Query: 155 TNRVIVSDSNNHRVQIF------DVNGRV--FQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
R + D+ + + I ++ G V F+ DGT V ++G + G +++P YI V
Sbjct: 171 WGRGVAVDTRRNHILITQTKDSSNLQGEVLLFRPDGTLVR---TVGQQQG-MKYPWYITV 226
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
++VSD N+ V +++ +G+ + FG G +EGQLK PRG+ D G I V D N
Sbjct: 227 DREGNILVSDCLNNCVFVYNEDGQFLLRFGGHGRDEGQLKHPRGICTDRAGNIIVADWLN 286
Query: 267 NRIQIF 272
R+++F
Sbjct: 287 CRVEMF 292
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 28/235 (11%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G+ V + I VAD N R+QVF GTFV +F ++ + +L+ P +A+
Sbjct: 74 FRDPFGVTVSDEGEIFVADRGNQRIQVFTLQGTFVRQFPTVVSGEEKLK-PDDVAMDGEG 132
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ V G ++ D FVG F NK G + + + R + D
Sbjct: 133 NLWVV-------------GDLWGMDTDFVG-FAVQYNKQGTVLRKFDLQATGWGRGVAVD 178
Query: 217 SNNHRVQIF------DVNGRVI------TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDS 264
+ + + I ++ G V+ T + G ++G +K+P + VD +G I V D
Sbjct: 179 TRRNHILITQTKDSSNLQGEVLLFRPDGTLVRTVGQQQG-MKYPWYITVDREGNILVSDC 237
Query: 265 GNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
NN + ++ DGQFL FG G +G+ K G+ GNI+V D N R+++F
Sbjct: 238 LNNCVFVYNEDGQFLLRFGGHGRDEGQLKHPRGICTDRAGNIIVADWLNCRVEMF 292
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 84/176 (47%), Gaps = 23/176 (13%)
Query: 57 WPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPD-NSIVVA- 114
W G G D V ++ FDL+ A W RG+AV N I++
Sbjct: 135 WVVGDLWGMDTDFVGFAVQYNKQGTVLRKFDLQ------ATGWGRGVAVDTRRNHILITQ 188
Query: 115 --DSSNHR--VQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
DSSN + V +F+ DGT V ++G + G +++P YI V ++VSD N+ V
Sbjct: 189 TKDSSNLQGEVLLFRPDGTLVR---TVGQQQG-MKYPWYITVDREGNILVSDCLNNCV-- 242
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
V+ DG F+ +FG G GQL+HP I +IV+D N RV++FD
Sbjct: 243 -----FVYNEDGQFLLRFGGHGRDEGQLKHPRGICTDRAGNIIVADWLNCRVEMFD 293
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 234 SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+FG EGS GQ + P GV V D+G I V D GN RIQ+FT G F+R F SG+ + K
Sbjct: 63 TFGGEGSGTGQFRDPFGVTVSDEGEIFVADRGNQRIQVFTLQGTFVRQFPTVVSGEEKLK 122
Query: 294 GLEGVAVMSNGNILV 308
+ VA+ GN+ V
Sbjct: 123 P-DDVAMDGEGNLWV 136
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 23/39 (58%)
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GSG G+F+ GV V G I V DR N RIQVF
Sbjct: 63 TFGGEGSGTGQFRDPFGVTVSDEGEIFVADRGNQRIQVF 101
>gi|225619604|ref|YP_002720861.1| NHL repeat containing protein [Brachyspira hyodysenteriae WA1]
gi|225214423|gb|ACN83157.1| NHL repeat containing protein [Brachyspira hyodysenteriae WA1]
Length = 700
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 21/241 (8%)
Query: 99 WPRGIAVGPDNSIVVA-----DSSN--HRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
W +G ++ I+++ DS+N + S+ ++ F + N + P I
Sbjct: 93 WLNITRMGYEDPIILSKINKYDSANVNEERENILSNFIYLKAFSTNLNFRKNINQPIQIK 152
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVF--QSDGTFVGK-----------FGSMGNKAGQL 198
V + + V D ++ ++ FD+NG + S G + K F + +L
Sbjct: 153 VMSDGSLYVLDYSDSSLKKFDINGNLIGKISHGKRLEKQQTSWWRNLLQFAAKVYPYEKL 212
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
E+P + + ++++ ++ +D N IT+ G G GQL P VAVD +G
Sbjct: 213 ENPRGFDIDANGYIYIANTKKDKILKYDANHNYITNIGVSGVSNGQLLGPSSVAVDREGN 272
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
+ V D+GNNRI IF +G FL +FG G +GEF G+AV + I V D N RIQ
Sbjct: 273 LYVSDTGNNRIVIFDIEGNFLYSFGKLGENNGEFFSPAGIAV-DDKYIYVADMGNKRIQQ 331
Query: 319 F 319
F
Sbjct: 332 F 332
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 33/231 (14%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGK--------------------FGSMGN 139
P I V D S+ V D S+ ++ F +G +GK F +
Sbjct: 148 PIQIKVMSDGSLYVLDYSDSSLKKFDINGNLIGKISHGKRLEKQQTSWWRNLLQFAAKVY 207
Query: 140 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE 199
+LE+P + + ++++ ++ +D N ++ G G GQL
Sbjct: 208 PYEKLENPRGFDIDANGYIYIANTKKDKILKYDANH-------NYITNIGVSGVSNGQLL 260
Query: 200 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYI 259
P +AV + VSD+ N+R+ IFD+ G + SFG G G+ P G+AVDD+ YI
Sbjct: 261 GPSSVAVDREGNLYVSDTGNNRIVIFDIEGNFLYSFGKLGENNGEFFSPAGIAVDDK-YI 319
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
V D GN RIQ F G ++++ F G++ +GN+ + D
Sbjct: 320 YVADMGNKRIQQFDLSGNYIQSIKH-----NLFNEPRGLSFAKDGNLYIAD 365
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--------- 95
IG G G P +AV + ++ V+D+ N+R+ + FD++ N ++
Sbjct: 249 IGVSGVSNGQLLGPSSVAVDREGNLYVSDTGNNRIVI----FDIEGNFLYSFGKLGENNG 304
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV 131
F P GIAV D I VAD N R+Q F G ++
Sbjct: 305 EFFSPAGIAVD-DKYIYVADMGNKRIQQFDLSGNYI 339
>gi|291240973|ref|XP_002740390.1| PREDICTED: tripartite motif protein-like [Saccoglossus kowalevskii]
Length = 830
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 31/285 (10%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-----A 96
Q+++G G F P G+ V +++VAD++N R+Q+ L++N ++
Sbjct: 568 QWEVGRTGVNDAEFNIPIGVTVDKKGNVLVADAANKRIQI------LESNGKYIDQIRVD 621
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
G+A+ P+++IVV + V ++ + + F + P I V++
Sbjct: 622 IPHTSGVAMAPNDNIVVVEWETRHVHIYNENRKKIKHFT-----YKEFVKPFGITVNSKG 676
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
++V+D IF VF SDG F+ K G + G+L P ++ + N VIVSD
Sbjct: 677 HILVADPG--ASYIF-----VFTSDGDFIMKIGEDVGE-GELYQPAFVVATRNNDVIVSD 728
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD--SGNNRIQIFTP 274
S H ++ F G+ I G +E +L GVAVD I V D S NRI + T
Sbjct: 729 S-KHGLKFFTEGGKYIHGIHQIGDDE-KLYDCSGVAVDSDYNIIVADRASTPNRILVLTY 786
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
DG +++ S + GVAV +G ++V D N I+ +
Sbjct: 787 DGSVIQSL---ESQHHKLSRPHGVAVTEDGYVIVADYGNDCIKKY 828
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+D N + + + D+N + G G + + P GV VD +G + V D+ N RIQI
Sbjct: 553 ADCNPYIIDVIDMNEQ--WEVGRTGVNDAEFNIPIGVTVDKKGNVLVADAANKRIQILES 610
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G+++ + GVA+ N NI+V + E + ++
Sbjct: 611 NGKYIDQIRV------DIPHTSGVAMAPNDNIVVVEWETRHVHIY 649
>gi|260781659|ref|XP_002585921.1| hypothetical protein BRAFLDRAFT_90331 [Branchiostoma floridae]
gi|229270989|gb|EEN41932.1| hypothetical protein BRAFLDRAFT_90331 [Branchiostoma floridae]
Length = 607
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 139/311 (44%), Gaps = 46/311 (14%)
Query: 24 IGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-- 81
IGQ P K + IG +G PG F PRG+AV + I V+D N RVQV
Sbjct: 321 IGQ-NVAPTLTATSKTNDKITIGGKGFYPGKFIEPRGVAVSSE-EIFVSDMKNKRVQVFS 378
Query: 82 -------CFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKF 134
FP L N + +P +A+ + + V D FV ++
Sbjct: 379 MSGVYLRLFPTILLGKNGEAM---FPTDVAIDGEGLVWVVGRP-----YVGEDVLFVVQY 430
Query: 135 GSMGNKAGQLE------HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKF 188
G +++ +P+ +N N+++V S+ +I+ +F ++ +F +F
Sbjct: 431 DPNGVPVTKVDVQCWAWYPNIAVDANNNKIVVETSD----EIW-----IFLTNSSFERRF 481
Query: 189 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFP 248
G K +LE Y+ + V+V+D + V ++ +G + FG GS E Q +FP
Sbjct: 482 G----KDQELEI-DYVTTNKDGDVLVTDYTSRGVYVYTNSGNLRFRFGGRGSAEAQFRFP 536
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
RG+ D G I V + GN R+ +FT G+F+R+ + G+A+ +G ++V
Sbjct: 537 RGICTDRFGNILVANQGNGRVDMFTSRGKFVRSV-------VKINNPFGIALGPDGQLVV 589
Query: 309 CDRENHRIQVF 319
+ H I +F
Sbjct: 590 TNVYRHSITIF 600
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y L+F+ G RGS F +PRGI +I+VA+ N RV + + V
Sbjct: 513 YTNSGNLRFRFGGRGSAEAQFRFPRGICTDRFGNILVANQGNGRVDMFTSRGKFVRSVV- 571
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQS 126
P GIA+GPD +VV + H + +F S
Sbjct: 572 -KINNPFGIALGPDGQLVVTNVYRHSITIFPS 602
>gi|353231714|emb|CCD79069.1| putative dock-9 [Schistosoma mansoni]
Length = 191
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 12/186 (6%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A + + +V+D H V V+ + G ++ +FG L P + V + R++
Sbjct: 3 PVDVAETINGNYLVSDYDLHCVTVYNTSGHYMSRFGQR-----YLSGPKGMVVDSRGRIL 57
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V D + + IF + G F+ +FG+ G +P +IAV++ + + VSD +
Sbjct: 58 VVDQKSCMICIF-------KPTGKFINRFGARGLADNHFGNPIFIAVNSRDEIFVSDHVH 110
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL 279
H +++FDVNG + FG G + G L P G+ D I + D GNNR+Q T
Sbjct: 111 HSIKVFDVNGLFLYKFGVNGIDPGMLHAPTGIGFDRFDRIFISDWGNNRVQQCTTSHLCN 170
Query: 280 RAFGCW 285
+ CW
Sbjct: 171 VSKLCW 176
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
P +A + +VSD + H V +++ +G ++ FG L P+G+ VD +G I
Sbjct: 3 PVDVAETINGNYLVSDYDLHCVTVYNTSGHYMSRFGQR-----YLSGPKGMVVDSRGRIL 57
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V D + I IF P G+F+ FG G D F +AV S I V D +H I+VF
Sbjct: 58 VVDQKSCMICIFKPTGKFINRFGARGLADNHFGNPIFIAVNSRDEIFVSDHVHHSIKVF 116
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 12/171 (7%)
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
P +A + +VSD + H V V+ + G ++ +FG L P + V
Sbjct: 3 PVDVAETINGNYLVSDYDLHCVT-------VYNTSGHYMSRFGQR-----YLSGPKGMVV 50
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
+ R++V D + + IF G+ I FG+ G + P +AV+ + I V D +
Sbjct: 51 DSRGRILVVDQKSCMICIFKPTGKFINRFGARGLADNHFGNPIFIAVNSRDEIFVSDHVH 110
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
+ I++F +G FL FG G G G+ I + D N+R+Q
Sbjct: 111 HSIKVFDVNGLFLYKFGVNGIDPGMLHAPTGIGFDRFDRIFISDWGNNRVQ 161
>gi|260824439|ref|XP_002607175.1| hypothetical protein BRAFLDRAFT_68030 [Branchiostoma floridae]
gi|229292521|gb|EEN63185.1| hypothetical protein BRAFLDRAFT_68030 [Branchiostoma floridae]
Length = 720
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 126/283 (44%), Gaps = 35/283 (12%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF----T 98
IG + + G P G+AV D +I V + N RVQ+ F+ T F
Sbjct: 462 LTIGQKVAGVGELGGPAGVAVDKDGAIAVVERQNKRVQI----FNADTGQSLRNFPVEGE 517
Query: 99 WPRGIAVGPDNSIVVAD-SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
P GI V + V + ++ + +G + + K + PH + V R
Sbjct: 518 KPFGIDVDSSGAFFVTSWGEDFGLRHYSKEGRLLDTY-----KPDCMRCPHGLTVLKDGR 572
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI-VSD 216
++V++ + + Q DG+ + + G G+L P +++ V+ V+D
Sbjct: 573 MVVAEPTQNTCLLL-------QPDGSLIREIGK-----GKLHSPVFVSADEKRDVLFVTD 620
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ H+V FD++G I FG +G +G+ + P GV D G I V + + R+Q+F PDG
Sbjct: 621 FSAHKVFAFDLDGNFIFDFGRQGDSDGEFQTPYGVTTDPAGNIIVLNDDDGRVQVFGPDG 680
Query: 277 QFLR-AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
+F+R A GSG G+ + +G I V + H I++
Sbjct: 681 KFIRTAVTVKGSG-------TGIVLTPDGYIAVTCFKGHCIEM 716
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P G+AV D +I V + N RVQ+F +D G+ S+ N + E P I V ++
Sbjct: 477 PAGVAVDKDGAIAVVERQNKRVQIFNAD---TGQ--SLRNFPVEGEKPFGIDVDSSGAFF 531
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+ D R + +G + + K + PH + V R++V++
Sbjct: 532 VTSWGE------DFGLRHYSKEGRLLDTY-----KPDCMRCPHGLTVLKDGRMVVAEPTQ 580
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ-GYISVGDSGNNRIQIFTPDGQF 278
+ + +G +I G +G+L P V+ D++ + V D +++ F DG F
Sbjct: 581 NTCLLLQPDGSLIREIG-----KGKLHSPVFVSADEKRDVLFVTDFSAHKVFAFDLDGNF 635
Query: 279 LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ FG G DGEF+ GV GNI+V + ++ R+QVF
Sbjct: 636 IFDFGRQGDSDGEFQTPYGVTTDPAGNIIVLNDDDGRVQVF 676
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 226 DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD-GQFLRAFGC 284
+V G + + G + + G+L P GVAVD G I+V + N R+QIF D GQ LR F
Sbjct: 455 EVKGNPVLTIGQKVAGVGELGGPAGVAVDKDGAIAVVERQNKRVQIFNADTGQSLRNFPV 514
Query: 285 WGS 287
G
Sbjct: 515 EGE 517
>gi|451946201|ref|YP_007466796.1| hypothetical protein UWK_00562 [Desulfocapsa sulfexigens DSM 10523]
gi|451905549|gb|AGF77143.1| hypothetical protein UWK_00562 [Desulfocapsa sulfexigens DSM 10523]
Length = 359
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
A P GI V D +AD ++ F S F+ +G NK P +AV N
Sbjct: 122 ALRSPSGIWVTSDGFKYIADIKRQQIVTFNSSNEFIRAYG---NKE-LFNKPVDVAVYNN 177
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
N + V D ++ + D + G V G G++ GQL P ++ V V V+
Sbjct: 178 N-IYVCDMVKSQIIVLD------RDSGEVVMTVGESGSEEGQLHKPTHVTVDKHGNVFVN 230
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D+ N RVQ FD +G + +FG G G + +G+ VD +G + V D+ +QIF D
Sbjct: 231 DAFNFRVQQFDSSGVFVKTFGFHGDRMGGMARSKGLDVDQEGNLYVADAAFEYVQIFNKD 290
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAV 300
GQ L FG G+ G GV +
Sbjct: 291 GQLLLFFGGPGNAPGNMYLPAGVHI 315
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 48 RGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWPRGIAV 105
R + G P GI V D +AD ++ V F + ++ F P +AV
Sbjct: 116 RATGRGALRSPSGIWVTSDGFKYIADIKRQQI-VTFNSSNEFIRAYGNKELFNKPVDVAV 174
Query: 106 GPDNSIVVADSSNHRVQVFQSD-GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 164
+N+I V D ++ V D G V G G++ GQL P ++ V V V+D+
Sbjct: 175 Y-NNNIYVCDMVKSQIIVLDRDSGEVVMTVGESGSEEGQLHKPTHVTVDKHGNVFVNDAF 233
Query: 165 NHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 224
N RVQ FD S G FV FG G++ G + + V + V+D+ VQI
Sbjct: 234 NFRVQQFD-------SSGVFVKTFGFHGDRMGGMARSKGLDVDQEGNLYVADAAFEYVQI 286
Query: 225 FDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
F+ +G+++ FG G+ G + P GV +D
Sbjct: 287 FNKDGQLLLFFGGPGNAPGNMYLPAGVHID 316
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 82/179 (45%), Gaps = 13/179 (7%)
Query: 142 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP 201
G L P I V++ ++D ++ F+ S F+ +G NK P
Sbjct: 121 GALRSPSGIWVTSDGFKYIADIKRQQIVTFN-------SSNEFIRAYG---NKE-LFNKP 169
Query: 202 HYIAVSNTNRVIVSDSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
+AV N N + V D ++ + D + G V+ + G GSEEGQL P V VD G +
Sbjct: 170 VDVAVYNNN-IYVCDMVKSQIIVLDRDSGEVVMTVGESGSEEGQLHKPTHVTVDKHGNVF 228
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
V D+ N R+Q F G F++ FG G G +G+ V GN+ V D +Q+F
Sbjct: 229 VNDAFNFRVQQFDSSGVFVKTFGFHGDRMGGMARSKGLDVDQEGNLYVADAAFEYVQIF 287
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P + V ++ V D+ N RVQ F S G FV FG G++ G + + V +
Sbjct: 216 PTHVTVDKHGNVFVNDAFNFRVQQFDSSGVFVKTFGFHGDRMGGMARSKGLDVDQEGNLY 275
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
V+D+ VQIF+ DG + FG GN G + P + + N
Sbjct: 276 VADAAFEYVQIFN-------KDGQLLLFFGGPGNAPGNMYLPAGVHIDYEN 319
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 17/123 (13%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------- 96
+G GSE G P + V ++ V D+ N RVQ FD ++ VF+
Sbjct: 203 VGESGSEEGQLHKPTHVTVDKHGNVFVNDAFNFRVQ----QFD--SSGVFVKTFGFHGDR 256
Query: 97 ---FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
+G+ V + ++ VAD++ VQ+F DG + FG GN G + P + +
Sbjct: 257 MGGMARSKGLDVDQEGNLYVADAAFEYVQIFNKDGQLLLFFGGPGNAPGNMYLPAGVHID 316
Query: 154 NTN 156
N
Sbjct: 317 YEN 319
>gi|337745906|ref|YP_004640068.1| copper amine oxidase domain-containing protein [Paenibacillus
mucilaginosus KNP414]
gi|336297095|gb|AEI40198.1| copper amine oxidase domain protein [Paenibacillus mucilaginosus
KNP414]
Length = 537
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 135/333 (40%), Gaps = 72/333 (21%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNH--------RVQVC-----------FP---HFDLKTN 91
F P G+AV PD + V+DS N RV V +P D N
Sbjct: 64 SFRVPAGLAVLPDGTAAVSDSRNGVIRKLTGGRVDVLAGVFYRKDDKGYPVGGLLDGAAN 123
Query: 92 CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDG--TFVGKFGSMGNK-----AGQL 144
F P G++ GPD S+ VAD+ NH ++ + G T V G +G K A +
Sbjct: 124 ASL--FQEPLGLSAGPDGSLYVADAGNHAIRRIDAKGNVTTVAGSGRLGAKDGKGAAAEF 181
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG----------RVFQSDGTFVGKFGSMGN- 193
P +A + + V+D+ H ++ G RV ++ V G +
Sbjct: 182 YRPGDVAAAPDGTLYVADTLGHTIRRISPQGEVTTLTAPSRRVVEATPGQVAAAGDFADG 241
Query: 194 --KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSE---------- 241
+ P IA+ + VSDS N R++ D+ +T+ G+
Sbjct: 242 PLAQAKFNEPTGIALDAKGNLYVSDSGNQRIRYIDLAKGTVTTVAGGGTAAELKDMYVPG 301
Query: 242 --------EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+ +L +P G+AV ++G + + DS N+ ++ + GQ G G
Sbjct: 302 GFSNGAALQARLNYPMGIAVTEEGGLLIADSQNHAVR-YLFGGQLSTLAGAGEQKMGLLD 360
Query: 294 GLEG---------VAVMSNGNILVCDRENHRIQ 317
G+EG VAV+ +G++LV D N+R++
Sbjct: 361 GMEGKAGLNRPADVAVLGDGSVLVADSFNNRLR 393
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 109/275 (39%), Gaps = 59/275 (21%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA----------------F 97
F P G++ GPD S+ VAD+ NH ++ D K N +A F
Sbjct: 126 LFQEPLGLSAGPDGSLYVADAGNHAIR----RIDAKGNVTTVAGSGRLGAKDGKGAAAEF 181
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV--------------GKFGSMGNKA-- 141
P +A PD ++ VAD+ H ++ G G+ + G+ A
Sbjct: 182 YRPGDVAAAPDGTLYVADTLGHTIRRISPQGEVTTLTAPSRRVVEATPGQVAAAGDFADG 241
Query: 142 ----GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV----------NGRVFQSDGTFV-G 186
+ P IA+ + VSDS N R++ D+ G + +V G
Sbjct: 242 PLAQAKFNEPTGIALDAKGNLYVSDSGNQRIRYIDLAKGTVTTVAGGGTAAELKDMYVPG 301
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV------QIFDVNGRVITSFGSEGS 240
F + +L +P IAV+ ++++DS NH V Q+ + G G
Sbjct: 302 GFSNGAALQARLNYPMGIAVTEEGGLLIADSQNHAVRYLFGGQLSTLAGAGEQKMGLLDG 361
Query: 241 EEGQ--LKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
EG+ L P VAV G + V DS NNR++ T
Sbjct: 362 MEGKAGLNRPADVAVLGDGSVLVADSFNNRLRRLT 396
>gi|260785808|ref|XP_002587952.1| hypothetical protein BRAFLDRAFT_87340 [Branchiostoma floridae]
gi|229273107|gb|EEN43963.1| hypothetical protein BRAFLDRAFT_87340 [Branchiostoma floridae]
Length = 367
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 86/169 (50%), Gaps = 10/169 (5%)
Query: 137 MGNKAGQLEH-PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKA 195
MG L+H H ++ ++V+++ VQ VF+ DG+ V +A
Sbjct: 1 MGIFEAVLDHRDHLRGIAINKGILVTEAEQGAVQ-------VFRPDGSLVRTV--RHPRA 51
Query: 196 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD 255
G + P + V ++VSD N+ V ++D G+ + FG +GS EGQLK+P G+ D
Sbjct: 52 GGMTRPGDVTVDGEGNILVSDWYNNYVYVYDEFGKFLFQFGGKGSGEGQLKYPLGICTDS 111
Query: 256 QGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNG 304
G+I V DSGN R+QIFT G+F+R G EG V+SNG
Sbjct: 112 SGHILVADSGNKRVQIFTRQGEFVRTVSTGSEPACLAMGPEGQLVVSNG 160
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 116/277 (41%), Gaps = 69/277 (24%)
Query: 59 RGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---AFTWPRGIAVGPDNSIVVAD 115
RGIA+ + I+V ++ VQV P L T P + V + +I+V+D
Sbjct: 15 RGIAI--NKGILVTEAEQGAVQVFRPDGSLVRTVRHPRAGGMTRPGDVTVDGEGNILVSD 72
Query: 116 SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 175
N+ V V+ G F+ +FG G+ GQL++P I ++ ++V+DS N RVQIF G
Sbjct: 73 WYNNYVYVYDEFGKFLFQFGGKGSGEGQLKYPLGICTDSSGHILVADSGNKRVQIFTRQG 132
Query: 176 RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF---------- 225
++ T GS P +A+ +++VS+ +H V +F
Sbjct: 133 EFVRTVST-----GS---------EPACLAMGPEGQLVVSNGLSHTVTVFSGDDSTDEAK 178
Query: 226 ---------------DVNG-------------------------RVITSFGSEGSEEGQL 245
DV G + + +FG E ++ G+
Sbjct: 179 KDARERYDSRSDRRQDVFGINAPEQERQAAGIEGAPSGSIGDKEQGLVTFGGEETQPGEY 238
Query: 246 KFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
+PRGV V I V D N R+Q+ + +G +LR F
Sbjct: 239 WYPRGVVVSPSNEIFVTDHNNRRVQVHSTEGVYLRHF 275
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 115/269 (42%), Gaps = 45/269 (16%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + + F+ G +GS G +P GI I+VADS N RVQ+ F + V
Sbjct: 81 YDEFGKFLFQFGGKGSGEGQLKYPLGICTDSSGHILVADSGNKRVQI----FTRQGEFVR 136
Query: 95 LAFT--WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
T P +A+GP+ +VV++ +H V VF D + ++A + Y +
Sbjct: 137 TVSTGSEPACLAMGPEGQLVVSNGLSHTVTVFSGDDST--------DEAKKDARERYDSR 188
Query: 153 SNTNRVIVSDSNNHRVQIFDVNG--RVFQSDGTFVGKFGSMGNKA-------------GQ 197
S + R +F +N + Q+ G GS+G+K G+
Sbjct: 189 S-----------DRRQDVFGINAPEQERQAAGIEGAPSGSIGDKEQGLVTFGGEETQPGE 237
Query: 198 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS-EGSEEGQLKFPRGVAVDDQ 256
+P + VS +N + V+D NN RVQ+ G + F + G PR V +D
Sbjct: 238 YWYPRGVVVSPSNEIFVTDHNNRRVQVHSTEGVYLRHFPTVVPGTGGNTIQPRDVCMDGN 297
Query: 257 GYISV---GDSGNNRIQIFTPDGQFLRAF 282
G + V G S ++ +Q ++ DG + F
Sbjct: 298 GTLWVVGEGGSADHVVQ-YSTDGTAMARF 325
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 191 MGNKAGQLEH-PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
MG L+H H ++ ++V+++ VQ+F +G ++ + G + P
Sbjct: 1 MGIFEAVLDHRDHLRGIAINKGILVTEAEQGAVQVFRPDGSLVRTV--RHPRAGGMTRPG 58
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
V VD +G I V D NN + ++ G+FL FG GSG+G+ K G+ S+G+ILV
Sbjct: 59 DVTVDGEGNILVSDWYNNYVYVYDEFGKFLFQFGGKGSGEGQLKYPLGICTDSSGHILVA 118
Query: 310 DRENHRIQVF 319
D N R+Q+F
Sbjct: 119 DSGNKRVQIF 128
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 21/141 (14%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQ------VCFPHFDLKTNCVFLAFTW 99
G ++PG + +PRG+ V P N I V D +N RVQ V HF
Sbjct: 229 GGEETQPGEYWYPRGVVVSPSNEIFVTDHNNRRVQVHSTEGVYLRHFPTVVPGTGGNTIQ 288
Query: 100 PRGIAVGPDNSIVV---ADSSNHRVQVFQSDGTFVGKF---------GSMGNKAGQLEHP 147
PR + + + ++ V S++H VQ + +DGT + +F G N G+L P
Sbjct: 289 PRDVCMDGNGTLWVVGEGGSADHVVQ-YSTDGTAMARFDLKKSHHFRGIAVNLKGRLYTP 347
Query: 148 HYIAVSNTNRVIVSDSNNHRV 168
+ SN+ R + + HR+
Sbjct: 348 --MESSNSEREGEENDSVHRL 366
>gi|443693477|gb|ELT94826.1| hypothetical protein CAPTEDRAFT_180426 [Capitella teleta]
Length = 297
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 106/222 (47%), Gaps = 24/222 (10%)
Query: 110 SIVVADSSNHRVQVFQSDG--TFVGKFGSMGNKAGQLEHPHYIAVSNT--NRVIVSDSNN 165
IV+ + NHRVQ+F S G T FG G Q P + + VIV+D+ N
Sbjct: 43 EIVITERDNHRVQIFGSRGEETRFQPFGCRGTGDNQFMCPSGVTTTRYLGANVIVADTGN 102
Query: 166 HRVQIFDVN------GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSN 218
RV F + G + Q+D S GN+ P + + T+R+ V+D
Sbjct: 103 RRVSTFRIGTDHLGYGTLQQTD--------SFGNQI--FAAPTGVEFDHLTSRLAVTDPG 152
Query: 219 NHRVQIFDV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
R+ D+ NGR I ++ E L P GVA+D +G + V D+ +R+ I+ GQ
Sbjct: 153 KSRLTFHDLQNGRCIGE--TQPVPECPLISPVGVAMDTRGRVYVSDTTQHRVYIYGKTGQ 210
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
F++ FG G G+F G+ + N+LV D N+RIQ+F
Sbjct: 211 FIKVFGEAGYDPGQFNKPMGLCFDRDHNLLVADEANNRIQMF 252
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 103/230 (44%), Gaps = 29/230 (12%)
Query: 68 SIVVADSSNHRVQVC--------FPHFDLKTNCVFLAFTWPRGIAVGP--DNSIVVADSS 117
IV+ + NHRVQ+ F F + F P G+ +++VAD+
Sbjct: 43 EIVITERDNHRVQIFGSRGEETRFQPFGCRGTGD-NQFMCPSGVTTTRYLGANVIVADTG 101
Query: 118 NHRVQVFQSDGTFVG-----KFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNHRVQIF 171
N RV F+ +G + S GN+ P + + T+R+ V+D R+
Sbjct: 102 NRRVSTFRIGTDHLGYGTLQQTDSFGNQI--FAAPTGVEFDHLTSRLAVTDPGKSRLTFH 159
Query: 172 DV-NGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
D+ NGR +G+ + L P +A+ RV VSD+ HRV I+ G+
Sbjct: 160 DLQNGRC-------IGE--TQPVPECPLISPVGVAMDTRGRVYVSDTTQHRVYIYGKTGQ 210
Query: 231 VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
I FG G + GQ P G+ D + V D NNRIQ+FT DGQ+++
Sbjct: 211 FIKVFGEAGYDPGQFNKPMGLCFDRDHNLLVADEANNRIQMFTADGQYIK 260
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 9/121 (7%)
Query: 1 RCIPSEAKNINSCFLLQTLLVS--GIGQV---GTTPRSQYLQKRRLQF--KIGSRGSEPG 53
RCI E + + C L+ + V+ G+V TT Y+ + QF G G +PG
Sbjct: 165 RCI-GETQPVPECPLISPVGVAMDTRGRVYVSDTTQHRVYIYGKTGQFIKVFGEAGYDPG 223
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVV 113
F P G+ D++++VAD +N+R+Q+ F V PRGI+V +V+
Sbjct: 224 QFNKPMGLCFDRDHNLLVADEANNRIQM-FTADGQYIKMVDENIHTPRGISVSVHEELVL 282
Query: 114 A 114
A
Sbjct: 283 A 283
>gi|445064338|ref|ZP_21376408.1| NHL repeat containing protein [Brachyspira hampsonii 30599]
gi|444504298|gb|ELV04990.1| NHL repeat containing protein [Brachyspira hampsonii 30599]
Length = 700
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 33/231 (14%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGK--------------------FGSMGN 139
P I V PD S+ V D S+ ++ F +G +GK F +
Sbjct: 148 PIQIKVMPDGSLYVLDYSDSALKKFDINGNLIGKISHGKRLEKQQTSWWRNVLQFVAKVY 207
Query: 140 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE 199
+LE+P + + ++++ ++ +D S+ ++ G G GQL
Sbjct: 208 PYEKLENPRGFDIDANGYIYIANTKKDKILKYD-------SNHNYITNIGVSGVSNGQLL 260
Query: 200 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYI 259
P +A+ + VSD+ N+R+ +FD+ G + SFG G EG+ P G+AV+DQ YI
Sbjct: 261 GPSSVALDKDGNLYVSDTGNNRIAVFDIYGNFLFSFGKLGENEGEFFSPAGIAVNDQ-YI 319
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
V D GN R+Q F G +++ F G++ +GN+ + D
Sbjct: 320 YVADMGNKRVQQFDLSGNYIQTIRH-----NLFNEPRGLSFARDGNLYIAD 365
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 121/291 (41%), Gaps = 51/291 (17%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV----------------------FL 95
P I V PD S+ V D S+ ++ FD+ N + F+
Sbjct: 148 PIQIKVMPDGSLYVLDYSDSALK----KFDINGNLIGKISHGKRLEKQQTSWWRNVLQFV 203
Query: 96 AFTWP-------RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
A +P RG + + I +A++ ++ + S+ ++ G G GQL P
Sbjct: 204 AKVYPYEKLENPRGFDIDANGYIYIANTKKDKILKYDSNHNYITNIGVSGVSNGQLLGPS 263
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 208
+A+ + VSD+ N+R+ +FD+ G F+ FG +G G+ P IAV N
Sbjct: 264 SVALDKDGNLYVSDTGNNRIAVFDIY-------GNFLFSFGKLGENEGEFFSPAGIAV-N 315
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
+ V+D N RVQ FD++G I + E PRG++ G + + D
Sbjct: 316 DQYIYVADMGNKRVQQFDLSGNYIQTIRHNLFNE-----PRGLSFARDGNLYIADGS--- 367
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++F D F + + + VA NGNI + D + RI V+
Sbjct: 368 -KVFYYD-IIESDFTVFNNSERYTVTPTSVAEGVNGNIYLTDFMSGRIDVY 416
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--------- 95
IG G G P +A+ D ++ V+D+ N+R+ V FD+ N +F
Sbjct: 249 IGVSGVSNGQLLGPSSVALDKDGNLYVSDTGNNRIAV----FDIYGNFLFSFGKLGENEG 304
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV 131
F P GIAV D I VAD N RVQ F G ++
Sbjct: 305 EFFSPAGIAVN-DQYIYVADMGNKRVQQFDLSGNYI 339
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----AFT 98
F G G G F P GIAV D I VAD N RVQ FDL N + F
Sbjct: 294 FSFGKLGENEGEFFSPAGIAVN-DQYIYVADMGNKRVQ----QFDLSGNYIQTIRHNLFN 348
Query: 99 WPRGIAVGPDNSIVVADSSN-HRVQVFQSDGT 129
PRG++ D ++ +AD S + +SD T
Sbjct: 349 EPRGLSFARDGNLYIADGSKVFYYDIIESDFT 380
>gi|440794595|gb|ELR15755.1| NHL repeatcontaining protein [Acanthamoeba castellanii str. Neff]
Length = 226
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
Query: 199 EHPHYIAV-SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
+ P +AV + T +IV+D +NHRV ++ +G + +FGS G GQ + P GVAVD G
Sbjct: 109 QRPADVAVDAATGNIIVADRDNHRVHVWQADGSFLRTFGSRGRGHGQFRRPEGVAVDVAG 168
Query: 258 YISVGDSGNNRIQIFTPDGQ-FLRAFGCWGSGDGEFKGLEGVAV-MSNGNILVCD 310
+ V D GN+R+Q++ G+ FLR G G G +FK GVAV + G+I+V D
Sbjct: 169 NVIVADYGNHRVQVWRATGRSFLRTLGSLGGGPAQFKDPRGVAVDAATGHIIVAD 223
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 71/125 (56%), Gaps = 10/125 (8%)
Query: 145 EHPHYIAV-SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
+ P +AV + T +IV+D +NHRV V+Q+DG+F+ FGS G GQ P
Sbjct: 109 QRPADVAVDAATGNIIVADRDNHRVH-------VWQADGSFLRTFGSRGRGHGQFRRPEG 161
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGR-VITSFGSEGSEEGQLKFPRGVAVDDQ-GYISV 261
+AV VIV+D NHRVQ++ GR + + GS G Q K PRGVAVD G+I V
Sbjct: 162 VAVDVAGNVIVADYGNHRVQVWRATGRSFLRTLGSLGGGPAQFKDPRGVAVDAATGHIIV 221
Query: 262 GDSGN 266
D GN
Sbjct: 222 ADCGN 226
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 8/122 (6%)
Query: 100 PRGIAV-GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P +AV +I+VAD NHRV V+Q+DG+F+ FGS G GQ P +AV V
Sbjct: 111 PADVAVDAATGNIIVADRDNHRVHVWQADGSFLRTFGSRGRGHGQFRRPEGVAVDVAGNV 170
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRVIVSDS 217
IV+D NHRVQ++ GR +F+ GS+G Q + P +AV + T +IV+D
Sbjct: 171 IVADYGNHRVQVWRATGR------SFLRTLGSLGGGPAQFKDPRGVAVDAATGHIIVADC 224
Query: 218 NN 219
N
Sbjct: 225 GN 226
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 248 PRGVAVDDQ-GYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNI 306
P VAVD G I V D N+R+ ++ DG FLR FG G G G+F+ EGVAV GN+
Sbjct: 111 PADVAVDAATGNIIVADRDNHRVHVWQADGSFLRTFGSRGRGHGQFRRPEGVAVDVAGNV 170
Query: 307 LVCDRENHRIQVF 319
+V D NHR+QV+
Sbjct: 171 IVADYGNHRVQVW 183
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 20/128 (15%)
Query: 52 PGCFTWPRGIAV-GPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-----------AFTW 99
P P +AV +I+VAD NHRV V + + FL F
Sbjct: 105 PSSAQRPADVAVDAATGNIIVADRDNHRVHV------WQADGSFLRTFGSRGRGHGQFRR 158
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDG-TFVGKFGSMGNKAGQLEHPHYIAV-SNTNR 157
P G+AV +++VAD NHRVQV+++ G +F+ GS+G Q + P +AV + T
Sbjct: 159 PEGVAVDVAGNVIVADYGNHRVQVWRATGRSFLRTLGSLGGGPAQFKDPRGVAVDAATGH 218
Query: 158 VIVSDSNN 165
+IV+D N
Sbjct: 219 IIVADCGN 226
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 17/85 (20%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------- 95
GSRG G F P G+AV +++VAD NHRVQV T FL
Sbjct: 147 GSRGRGHGQFRRPEGVAVDVAGNVIVADYGNHRVQVW-----RATGRSFLRTLGSLGGGP 201
Query: 96 -AFTWPRGIAV-GPDNSIVVADSSN 118
F PRG+AV I+VAD N
Sbjct: 202 AQFKDPRGVAVDAATGHIIVADCGN 226
>gi|260823288|ref|XP_002604115.1| hypothetical protein BRAFLDRAFT_71597 [Branchiostoma floridae]
gi|229289440|gb|EEN60126.1| hypothetical protein BRAFLDRAFT_71597 [Branchiostoma floridae]
Length = 569
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 44/219 (20%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE----------- 145
F P G+ V + I VAD N R+QVF GTFV +F + ++ ++
Sbjct: 327 FWNPSGVTVSDEGEIFVADWRNQRIQVFTLQGTFVREFPTAESREEEMCPQDVAMDGEGN 386
Query: 146 -------HPHYIAVSNTNRVI---------------VSDSNNHRV-----QIFDVNGRV- 177
PH + + RV+ V NH + I + +G V
Sbjct: 387 LWVVGGIEPHAVQYNKQGRVLRKIGLQNIRWWTGVAVDTRRNHILITKPDDILESHGEVL 446
Query: 178 -FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFG 236
++ DGT V +MG + G ++ P YI V V+VSD + V +++ +G+ + FG
Sbjct: 447 VYRPDGTLVR---TMGQQQG-MKGPQYITVDGEGNVLVSDWRSKYVYVYNEDGQFLFQFG 502
Query: 237 SEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
GS EGQLK PRG+ D G I V D N+ +++F D
Sbjct: 503 GYGSGEGQLKDPRGICTDRAGNIIVADQDNSCVEMFDQD 541
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 99 WPRGIAVGPD-NSIVVAD-----SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 152
W G+AV N I++ S+ V V++ DGT V +MG + G ++ P YI V
Sbjct: 417 WWTGVAVDTRRNHILITKPDDILESHGEVLVYRPDGTLVR---TMGQQQG-MKGPQYITV 472
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
V+VSD + V +++ DG F+ +FG G+ GQL+ P I +
Sbjct: 473 DGEGNVLVSDWRSKYVYVYN-------EDGQFLFQFGGYGSGEGQLKDPRGICTDRAGNI 525
Query: 213 IVSDSNNHRVQIFDVNGRV 231
IV+D +N V++FD + ++
Sbjct: 526 IVADQDNSCVEMFDQDRKI 544
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+ I V + +++V+D + V V+ DG F+ +FG G+ GQL+ P I +I
Sbjct: 467 PQYITVDGEGNVLVSDWRSKYVYVYNEDGQFLFQFGGYGSGEGQLKDPRGICTDRAGNII 526
Query: 160 VSDSNNHRVQIFDVNGRVFQS 180
V+D +N V++FD + ++ Q+
Sbjct: 527 VADQDNSCVEMFDQDRKIPQT 547
>gi|379719861|ref|YP_005311992.1| copper amine oxidase domain-containing protein [Paenibacillus
mucilaginosus 3016]
gi|378568533|gb|AFC28843.1| copper amine oxidase domain-containing protein [Paenibacillus
mucilaginosus 3016]
Length = 535
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 135/333 (40%), Gaps = 72/333 (21%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNH--------RVQVC-----------FP---HFDLKTN 91
F P G+AV PD + V+DS N RV V +P D N
Sbjct: 64 SFRVPAGLAVLPDGTAAVSDSRNGVIRKLTGGRVDVLAGVFYRKDDKGYPVGGLLDGAAN 123
Query: 92 CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDG--TFVGKFGSMGNK-----AGQL 144
F P G++ GPD S+ VAD+ NH ++ + G T V G +G K A +
Sbjct: 124 ASL--FQEPLGLSAGPDGSLYVADAGNHAIRRIDAKGNVTTVAGSGRLGAKDGKGAAAEF 181
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG----------RVFQSDGTFVGKFGSMGN- 193
P +A + + V+D+ H ++ G RV ++ V G +
Sbjct: 182 YRPGDVAAAPDGTLYVADTLGHTIRRISPQGEVTTLTAPSRRVVEATPGQVAAAGDFADG 241
Query: 194 --KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSE---------- 241
+ P IA+ + VSDS N R++ D+ +T+ G+
Sbjct: 242 PLAQAKFNEPTGIALDAKGNLYVSDSGNQRIRYIDLAKGTVTTVAGGGTAAELKDMYVPG 301
Query: 242 --------EGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
+ +L +P G+AV ++G + + DS N+ ++ + GQ G G
Sbjct: 302 GFSNGAALQARLNYPMGIAVTEEGGLLIADSQNHDVR-YLFGGQLSTLAGAGEQKMGLLD 360
Query: 294 GLEG---------VAVMSNGNILVCDRENHRIQ 317
G+EG VAV+ +G++LV D N+R++
Sbjct: 361 GMEGKAGLNRPADVAVLGDGSVLVADSFNNRLR 393
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 109/275 (39%), Gaps = 59/275 (21%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA----------------F 97
F P G++ GPD S+ VAD+ NH ++ D K N +A F
Sbjct: 126 LFQEPLGLSAGPDGSLYVADAGNHAIR----RIDAKGNVTTVAGSGRLGAKDGKGAAAEF 181
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV--------------GKFGSMGNKA-- 141
P +A PD ++ VAD+ H ++ G G+ + G+ A
Sbjct: 182 YRPGDVAAAPDGTLYVADTLGHTIRRISPQGEVTTLTAPSRRVVEATPGQVAAAGDFADG 241
Query: 142 ----GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV----------NGRVFQSDGTFV-G 186
+ P IA+ + VSDS N R++ D+ G + +V G
Sbjct: 242 PLAQAKFNEPTGIALDAKGNLYVSDSGNQRIRYIDLAKGTVTTVAGGGTAAELKDMYVPG 301
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV------QIFDVNGRVITSFGSEGS 240
F + +L +P IAV+ ++++DS NH V Q+ + G G
Sbjct: 302 GFSNGAALQARLNYPMGIAVTEEGGLLIADSQNHDVRYLFGGQLSTLAGAGEQKMGLLDG 361
Query: 241 EEGQ--LKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
EG+ L P VAV G + V DS NNR++ T
Sbjct: 362 MEGKAGLNRPADVAVLGDGSVLVADSFNNRLRRLT 396
>gi|429124393|ref|ZP_19184925.1| NHL repeat containing protein [Brachyspira hampsonii 30446]
gi|426279632|gb|EKV56653.1| NHL repeat containing protein [Brachyspira hampsonii 30446]
Length = 700
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 33/231 (14%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGK--------------------FGSMGN 139
P I V PD S+ V D S+ ++ F +G +GK F +
Sbjct: 148 PIQIKVMPDGSLYVLDYSDSALKKFDINGNLIGKISHGKRLEKQQTSWWRNVLQFVAKVY 207
Query: 140 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE 199
+LE+P + + ++++ ++ +D S+ ++ G G GQL
Sbjct: 208 PYEKLENPRGFDIDANGYIYIANTKKDKILKYD-------SNHNYITNIGVSGVSNGQLL 260
Query: 200 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYI 259
P +A+ + VSD+ N+R+ +FDV+G + SFG G EG+ P G+AV++Q YI
Sbjct: 261 GPSSVALDKDGNLYVSDTGNNRIVVFDVDGNFLFSFGKLGENEGEFFSPAGIAVNEQ-YI 319
Query: 260 SVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
V D GN RIQ F G +++ F G++ +GN+ + D
Sbjct: 320 YVADMGNKRIQQFDLSGNYIQTIRH-----NLFNEPRGLSFARDGNLYIAD 365
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 123/291 (42%), Gaps = 51/291 (17%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV----------------------FL 95
P I V PD S+ V D S+ ++ FD+ N + F+
Sbjct: 148 PIQIKVMPDGSLYVLDYSDSALK----KFDINGNLIGKISHGKRLEKQQTSWWRNVLQFV 203
Query: 96 AFTWP-------RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
A +P RG + + I +A++ ++ + S+ ++ G G GQL P
Sbjct: 204 AKVYPYEKLENPRGFDIDANGYIYIANTKKDKILKYDSNHNYITNIGVSGVSNGQLLGPS 263
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 208
+A+ + VSD+ N+R+ +FDV DG F+ FG +G G+ P IAV N
Sbjct: 264 SVALDKDGNLYVSDTGNNRIVVFDV-------DGNFLFSFGKLGENEGEFFSPAGIAV-N 315
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
+ V+D N R+Q FD++G I + E PRG++ G + + D
Sbjct: 316 EQYIYVADMGNKRIQQFDLSGNYIQTIRHNLFNE-----PRGLSFARDGNLYIADGS--- 367
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++F D F + + + VA +NGNI + D + RI V+
Sbjct: 368 -KVFYYD-IIESDFTVFNNSERYTVTPTSVAEGANGNIYLTDFMSGRIDVY 416
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 60/149 (40%), Gaps = 14/149 (9%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL----AFT 98
F G G G F P GIAV + I VAD N R+Q FDL N + F
Sbjct: 294 FSFGKLGENEGEFFSPAGIAVN-EQYIYVADMGNKRIQ----QFDLSGNYIQTIRHNLFN 348
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
PRG++ D ++ +AD S +VF D F N P +A +
Sbjct: 349 EPRGLSFARDGNLYIADGS----KVFYYD-IIESDFTVFNNSERYTVTPTSVAEGANGNI 403
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGK 187
++D + R+ ++ + + FV +
Sbjct: 404 YLTDFMSGRIDVYTRKEEYYANLDVFVDR 432
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Query: 45 IGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL--------- 95
IG G G P +A+ D ++ V+D+ N+R+ V FD+ N +F
Sbjct: 249 IGVSGVSNGQLLGPSSVALDKDGNLYVSDTGNNRIVV----FDVDGNFLFSFGKLGENEG 304
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFV 131
F P GIAV + I VAD N R+Q F G ++
Sbjct: 305 EFFSPAGIAVN-EQYIYVADMGNKRIQQFDLSGNYI 339
>gi|223414376|gb|ACM89406.1| putative scytonemin biosynthesis protein [Chlorogloeopsis sp.
Cgs-089]
Length = 303
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 47/212 (22%)
Query: 119 HRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNHRVQIFD----- 172
++++ F S G ++G GS G GQ + P + + T + D N+R+ FD
Sbjct: 24 NKIEKFSSSGQYIGAIGSGGTGPGQFDEPTTVDFNPVTGDLYAGDVYNNRINQFDSQGNF 83
Query: 173 ------------VNGRVF---------QSDGTFVGKF-------------------GSMG 192
V GR+F ++ ++G F G++G
Sbjct: 84 IRSFANGEFTPLVEGRLFFGPSGVTFDKTGNVYIGDFNGERILKFTPDGQQIGVIGGTLG 143
Query: 193 NKAGQLEHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGV 251
GQ + + +S + + V+D N+RVQ+ D NG + +FGS GS GQL P G+
Sbjct: 144 TAPGQFQGVAGLRISPVSGNIFVADQYNNRVQVLDPNGNPLLAFGSAGSGPGQLLQPIGI 203
Query: 252 AVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
VDDQ + V DS N+R+Q+F +G FL +FG
Sbjct: 204 EVDDQENVYVADSINSRVQVFDKNGNFLTSFG 235
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 95/209 (45%), Gaps = 27/209 (12%)
Query: 45 IGSRGSEPGCFTWPRGIAVGP-DNSIVVADSSNHRVQVCFPHFDLKTNCV-------FLA 96
IGS G+ PG F P + P + D N+R+ FD + N + F
Sbjct: 39 IGSGGTGPGQFDEPTTVDFNPVTGDLYAGDVYNNRIN----QFDSQGNFIRSFANGEFTP 94
Query: 97 ------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG-SMGNKAGQLEHPHY 149
F P G+ ++ + D + R+ F DG +G G ++G GQ +
Sbjct: 95 LVEGRLFFGPSGVTFDKTGNVYIGDFNGERILKFTPDGQQIGVIGGTLGTAPGQFQGVAG 154
Query: 150 IAVSN-TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 208
+ +S + + V+D N+RVQ+ D NG + FGS G+ GQL P I V +
Sbjct: 155 LRISPVSGNIFVADQYNNRVQVLDPNGNPLLA-------FGSAGSGPGQLLQPIGIEVDD 207
Query: 209 TNRVIVSDSNNHRVQIFDVNGRVITSFGS 237
V V+DS N RVQ+FD NG +TSFG
Sbjct: 208 QENVYVADSINSRVQVFDKNGNFLTSFGE 236
>gi|188501663|gb|ACD54780.1| NHL repeat containing protein-like protein [Philodina roseola]
Length = 324
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 133/300 (44%), Gaps = 39/300 (13%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---------FTW 99
GS +P+GI + + +AD +NHR+Q +F T ++ F
Sbjct: 32 GSGSTNLNYPKGIVIDSIKHLHIADYNNHRIQKWSLNFSSATTIAGISGTTRSNLDGFNN 91
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQ---SDGTFVGKFGSMGNKAGQLEHPHYIAV-SNT 155
P +A+ +I VAD+ NHRV ++ ++GT G G+ + P ++ SN+
Sbjct: 92 PSDVAIDSVGNIYVADTLNHRVVLYSVGATNGTLFAGTGLPGSGIHEFNQPSGLSFDSNS 151
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP---HYIAVSNTNRV 212
N + ++D NHR+ + +N S+GT V G QL P H+ A S++ +
Sbjct: 152 NALYIADHENHRIMRYYLN----SSNGTVVAGGSGSGRAITQLCLPKGIHFDAASSS--I 205
Query: 213 IVSDSNNHRVQIFDVNGRVITSF--------GSEGSEEGQLKFPRGVAVDDQGYISVGDS 264
+++ H + + ++ TS+ G+ G+ L FP VA+D G + V D
Sbjct: 206 FIANYGAHNIVRWPLSA---TSWILVAGDINGAAGTSASFLTFPTDVALDSLGNVYVADR 262
Query: 265 GNNRIQIFTPDGQ-----FLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
N+RIQ F P G+ G+ F E V + N+ V D N+R+Q F
Sbjct: 263 DNHRIQFF-PQGEINGTTIAGLTSTLGTAADRFDKPESVFIDGQFNVFVSDSSNNRVQKF 321
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 99/251 (39%), Gaps = 63/251 (25%)
Query: 129 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKF 188
T G +G+ + L +P I + + + ++D NNHR+Q + +N F S T G
Sbjct: 23 TVAGATTPLGSGSTNLNYPKGIVIDSIKHLHIADYNNHRIQKWSLN---FSSATTIAGIS 79
Query: 189 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV---NGRVITSFGSEGSEEGQL 245
G+ + +P +A+ + + V+D+ NHRV ++ V NG + G GS +
Sbjct: 80 GTTRSNLDGFNNPSDVAIDSVGNIYVADTLNHRVVLYSVGATNGTLFAGTGLPGSGIHEF 139
Query: 246 KFPRGVAVD-----------------------DQGYISVGDSGNNR--IQIFTPDG---- 276
P G++ D G + G SG+ R Q+ P G
Sbjct: 140 NQPSGLSFDSNSNALYIADHENHRIMRYYLNSSNGTVVAGGSGSGRAITQLCLPKGIHFD 199
Query: 277 -----QFLRAFGC------------WGSGDGEFKGLEG-----------VAVMSNGNILV 308
F+ +G W G+ G G VA+ S GN+ V
Sbjct: 200 AASSSIFIANYGAHNIVRWPLSATSWILVAGDINGAAGTSASFLTFPTDVALDSLGNVYV 259
Query: 309 CDRENHRIQVF 319
DR+NHRIQ F
Sbjct: 260 ADRDNHRIQFF 270
>gi|197119429|ref|YP_002139856.1| NHL repeat domain-containing protein [Geobacter bemidjiensis Bem]
gi|197088789|gb|ACH40060.1| NHL repeat domain protein [Geobacter bemidjiensis Bem]
Length = 404
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 88/188 (46%), Gaps = 13/188 (6%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-T 155
F + G+AV I VAD+ H V +F S GT V G +G +GQ + P ++
Sbjct: 129 FKYAIGVAVDARGYIWVADNEAHNVTLFTSAGTLVKTIGGLGTASGQFDFPVGVSYEKVA 188
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP-----HYIAVSNTN 210
++V+V+D+ NHR+Q FD S+ FV G+ G Q ++P Y V N
Sbjct: 189 DQVVVADAGNHRLQFFDAG-----SNNAFVKSIGTYGTGPLQFQYPVGAAFEYDPVGQLN 243
Query: 211 RVIVSDSNNHRVQIFDVN--GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
R+ V+D + +VQ+ D G + G G G P +A D + +GN R
Sbjct: 244 RMYVTDLHMSKVQVLDPAGIGTFLKFIGFSGLVSGTFMDPMALAFDPLNKRLIVANGNGR 303
Query: 269 IQIFTPDG 276
+ +F DG
Sbjct: 304 LHLFGIDG 311
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 115/272 (42%), Gaps = 24/272 (8%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSS 117
P IA+ P VAD+ V F+L + L T AV DNS + S
Sbjct: 50 PVSIAMDPRGFYYVADTRKGGVS----KFNLSGKLLQLFRTASPARAVALDNSGNLLVSM 105
Query: 118 NHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 177
V + G + +G+ GQ ++ +AV + V+D+ H V +
Sbjct: 106 GTSVALLDQQG---AQKLLLGSGLGQFKYAIGVAVDARGYIWVADNEAHNVTL------- 155
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSNNHRVQIFDV--NGRVITS 234
F S GT V G +G +GQ + P ++ ++V+V+D+ NHR+Q FD N + S
Sbjct: 156 FTSAGTLVKTIGGLGTASGQFDFPVGVSYEKVADQVVVADAGNHRLQFFDAGSNNAFVKS 215
Query: 235 FGSEGSEEGQLKFPRGVA-----VDDQGYISVGDSGNNRIQIFTPD--GQFLRAFGCWGS 287
G+ G+ Q ++P G A V + V D +++Q+ P G FL+ G G
Sbjct: 216 IGTYGTGPLQFQYPVGAAFEYDPVGQLNRMYVTDLHMSKVQVLDPAGIGTFLKFIGFSGL 275
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G F +A L+ N R+ +F
Sbjct: 276 VSGTFMDPMALAFDPLNKRLIVANGNGRLHLF 307
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 18/196 (9%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-----FTWPRGI 103
GS G F + G+AV I VAD+ H V + L L F +P G+
Sbjct: 123 GSGLGQFKYAIGVAVDARGYIWVADNEAHNVTLFTSAGTLVKTIGGLGTASGQFDFPVGV 182
Query: 104 AVGP-DNSIVVADSSNHRVQVFQ--SDGTFVGKFGSMGNKAGQLEHP-----HYIAVSNT 155
+ + +VVAD+ NHR+Q F S+ FV G+ G Q ++P Y V
Sbjct: 183 SYEKVADQVVVADAGNHRLQFFDAGSNNAFVKSIGTYGTGPLQFQYPVGAAFEYDPVGQL 242
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
NR+ V+D + +VQ+ D G GTF+ G G +G P +A N+ ++
Sbjct: 243 NRMYVTDLHMSKVQVLDPAGI-----GTFLKFIGFSGLVSGTFMDPMALAFDPLNKRLIV 297
Query: 216 DSNNHRVQIFDVNGRV 231
+ N R+ +F ++G V
Sbjct: 298 ANGNGRLHLFGIDGGV 313
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 20/177 (11%)
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
L P IA+ V+D+ V F+++G++ Q T
Sbjct: 47 LASPVSIAMDPRGFYYVADTRKGGVSKFNLSGKLLQLFRT--------------ASPARA 92
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
+A+ N+ ++VS + V + D G GS GQ K+ GVAVD +GYI V D
Sbjct: 93 VALDNSGNLLVSMGTS--VALLDQQGAQKLLLGSG---LGQFKYAIGVAVDARGYIWVAD 147
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN-ILVCDRENHRIQVF 319
+ + + +FT G ++ G G+ G+F GV+ + ++V D NHR+Q F
Sbjct: 148 NEAHNVTLFTSAGTLVKTIGGLGTASGQFDFPVGVSYEKVADQVVVADAGNHRLQFF 204
>gi|406955227|gb|EKD83783.1| hypothetical protein ACD_39C00451G0001, partial [uncultured
bacterium]
Length = 443
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 119/300 (39%), Gaps = 71/300 (23%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC---------FPH--------FDL 88
G G P F P + + + +I+VAD N+R+QV P+ FD
Sbjct: 39 GFEGKGPLEFGSPEDLVLTREGTIIVADHRNNRLQVLNKDGEFIGVVPNIAKIDESKFDA 98
Query: 89 ------KTNC--VFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQS-DGTFVGKFGSMGN 139
K N + F P G+AV I V ++ + +G G G
Sbjct: 99 AALEARKKNLEELMALFKKPAGLAVNAQGLIYVTLYETDKIAIIDPRNGALTGTLCKSGK 158
Query: 140 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR-----VFQSD------------- 181
G+L P I VS R+ V++ N RVQI + G+ ++Q +
Sbjct: 159 AQGELYGPMDIDVSFDGRIAVAEFRNRRVQILNDEGKCQKELIYQEETKKGALSAVAPRG 218
Query: 182 --------------------------GTFVGKFGSM-GNKAGQLEHPHYIAVSNTNRVIV 214
GT + ++G + GN G L +P +I + N +++
Sbjct: 219 VHWTSDGRLVVSYPLYNQVVCWDPKEGTVLWRYGGIKGNDKGMLNNPSFITSALNNNLLI 278
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+DS NHR+ +G+ G GS G L PRG+A++ + + + D GNNRI F P
Sbjct: 279 ADSLNHRIVEITGDGKFYDHHGRRGSRPGALLSPRGMALNREEVLIIADQGNNRIHFFQP 338
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 103/247 (41%), Gaps = 31/247 (12%)
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVG-----------KFGSMGNKAGQ 143
L F P + + + +I+VAD N+R+QV DG F+G KF + +A +
Sbjct: 46 LEFGSPEDLVLTREGTIIVADHRNNRLQVLNKDGEFIGVVPNIAKIDESKFDAAALEARK 105
Query: 144 ---------LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNK 194
+ P +AV+ + V+ ++ I D +G G G
Sbjct: 106 KNLEELMALFKKPAGLAVNAQGLIYVTLYETDKIAIID------PRNGALTGTLCKSGKA 159
Query: 195 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSF-GSEGSEEGQLK--FPRGV 251
G+L P I VS R+ V++ N RVQI + G+ E +++G L PRGV
Sbjct: 160 QGELYGPMDIDVSFDGRIAVAEFRNRRVQILNDEGKCQKELIYQEETKKGALSAVAPRGV 219
Query: 252 AVDDQGYISVGDSGNNRIQIFTP-DGQFL-RAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
G + V N++ + P +G L R G G+ G + N N+L+
Sbjct: 220 HWTSDGRLVVSYPLYNQVVCWDPKEGTVLWRYGGIKGNDKGMLNNPSFITSALNNNLLIA 279
Query: 310 DRENHRI 316
D NHRI
Sbjct: 280 DSLNHRI 286
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHR-VQVC----FPHFDLKTNCVFLAFTWP 100
G +G++ G P I +N++++ADS NHR V++ F + A P
Sbjct: 253 GIKGNDKGMLNNPSFITSALNNNLLIADSLNHRIVEITGDGKFYDHHGRRGSRPGALLSP 312
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGT 129
RG+A+ + +++AD N+R+ FQ T
Sbjct: 313 RGMALNREEVLIIADQGNNRIHFFQPGQT 341
>gi|198469800|ref|XP_001355127.2| GA11485 [Drosophila pseudoobscura pseudoobscura]
gi|198147041|gb|EAL32184.2| GA11485 [Drosophila pseudoobscura pseudoobscura]
Length = 1218
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 173 VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
V GR + KFGS+G GQ PH + +IV+D+NNHR+++FD G +
Sbjct: 937 VTGRNKATPMQIRCKFGSLGTAKGQFNSPHGFCLGVDEEIIVADTNNHRIEVFDKMGALK 996
Query: 233 TSFGSEGSEEGQLKFPRGVAV-DDQGYISVGDSGN--NRIQIFTPDGQFLRAFGCWGSGD 289
FG G EEGQL +PR VAV + G V D GN +R+QIF+ G F+R
Sbjct: 997 FQFGVAGKEEGQLWYPRKVAVMHNNGKFVVCDRGNERSRMQIFSKCGHFMRKIAIR---- 1052
Query: 290 GEFKGLEGVAVMSNGNILVCD 310
+ G+AV + G+I+ D
Sbjct: 1053 -YIDIVAGLAVTAKGHIVAVD 1072
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 22/191 (11%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV-FQSDGTFVGKFGSM 191
KFGS+G GQ PH + +IV+D+NNHR+++FD G + FQ FG
Sbjct: 951 KFGSLGTAKGQFNSPHGFCLGVDEEIIVADTNNHRIEVFDKMGALKFQ--------FGVA 1002
Query: 192 GNKAGQLEHPHYIAVSNTN-RVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFP 248
G + GQL +P +AV + N + +V D N R+QIF G + +
Sbjct: 1003 GKEEGQLWYPRKVAVMHNNGKFVVCDRGNERSRMQIFSKCGHFMRKIAIR-----YIDIV 1057
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
G+AV +G+I DS + + + + +G+ +R F C + +A+ N + V
Sbjct: 1058 AGLAVTAKGHIVAVDSVSPTVFVISEEGELVRWFDC----SDYMREPSDIAIRDN-DFYV 1112
Query: 309 CDRENHRIQVF 319
CD + H + VF
Sbjct: 1113 CDFKGHCVAVF 1123
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 108/259 (41%), Gaps = 44/259 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G +G D I+VAD++NHR++VF G +FG G + GQL +P +AV + N
Sbjct: 962 FNSPHGFCLGVDEEIIVADTNNHRIEVFDKMGALKFQFGVAGKEEGQLWYPRKVAVMHNN 1021
Query: 157 -RVIVSDSNNH--RVQIFD----------------VNGRVFQSDGTFV------------ 185
+ +V D N R+QIF V G + G V
Sbjct: 1022 GKFVVCDRGNERSRMQIFSKCGHFMRKIAIRYIDIVAGLAVTAKGHIVAVDSVSPTVFVI 1081
Query: 186 ---GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
G+ + + + P IA+ + N V D H V +F +G + G+E
Sbjct: 1082 SEEGELVRWFDCSDYMREPSDIAIRD-NDFYVCDFKGHCVAVFQDDGTFLYRIGNEKVT- 1139
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNRIQI--FTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
FP G+ + + G + +GDS NR + ++ +G F C GL+ +
Sbjct: 1140 ---CFPNGIDISNAGDVLIGDSHGNRFHVACYSREGVLQSEFECPHVKVSRCCGLK---I 1193
Query: 301 MSNGNILVCDRENHRIQVF 319
S G ++ + NH + V
Sbjct: 1194 TSEGYVVTLAKNNHHVLVL 1212
>gi|260794800|ref|XP_002592395.1| hypothetical protein BRAFLDRAFT_67260 [Branchiostoma floridae]
gi|229277614|gb|EEN48406.1| hypothetical protein BRAFLDRAFT_67260 [Branchiostoma floridae]
Length = 602
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 130/292 (44%), Gaps = 34/292 (11%)
Query: 38 KRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH--FDLKTNCVFL 95
K+RL F G GS+ G F +P G+ V I VADS N R+QV H F K V
Sbjct: 331 KQRLTF--GGEGSDDGQFDFPFGVTVSEKAEIFVADSGNGRIQVFTLHGTFVRKFPAVVP 388
Query: 96 AFTWPRGIAVGPDNS----IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
+ V D +V+ S + + G + K K + +A
Sbjct: 389 GEQEQCPMDVALDREGNLWVVIRTESEEFAAQYTTQGRLLKKILLKETK-----NLRQVA 443
Query: 152 V-SNTNRVIVS----DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
V + N+++++ D +N + ++ V +SDGT V ++G + G +I V
Sbjct: 444 VDTKRNQILITQTSGDGDNLQSEVL-----VLRSDGTLV---RTVGQQQGM--EVWFITV 493
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
+ VSD +H V F +G+ + +G GS EGQLK P G+ D G I V D GN
Sbjct: 494 DGEGHIHVSDREHHLVHTFSEDGQFLFQYGGLGSGEGQLKEPAGICTDRAGNIIVADRGN 553
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
R+++F G+F++ + L VA+ G I+V E++ + +
Sbjct: 554 RRVEMFDKTGRFIKHI------TTDMSCLCAVAMTPLGQIVVTCAEDNTVTI 599
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 110/233 (47%), Gaps = 29/233 (12%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS--- 153
F +P G+ V I VADS N R+QVF GTFV KF ++ Q + P +A+
Sbjct: 346 FDFPFGVTVSEKAEIFVADSGNGRIQVFTLHGTFVRKFPAV-VPGEQEQCPMDVALDREG 404
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV-SNTNRV 212
N VI ++S Q + + G + K K + +AV + N++
Sbjct: 405 NLWVVIRTESEEFAAQ--------YTTQGRLLKKILLKETK-----NLRQVAVDTKRNQI 451
Query: 213 IVS------DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
+++ D+ V + +G ++ + G + E + VD +G+I V D +
Sbjct: 452 LITQTSGDGDNLQSEVLVLRSDGTLVRTVGQQQGMEVWF-----ITVDGEGHIHVSDREH 506
Query: 267 NRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ + F+ DGQFL +G GSG+G+ K G+ GNI+V DR N R+++F
Sbjct: 507 HLVHTFSEDGQFLFQYGGLGSGEGQLKEPAGICTDRAGNIIVADRGNRRVEMF 559
>gi|195163616|ref|XP_002022645.1| GL14648 [Drosophila persimilis]
gi|194104668|gb|EDW26711.1| GL14648 [Drosophila persimilis]
Length = 1214
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 173 VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
V GR + KFGS+G GQ PH + +IV+D+NNHR+++FD G +
Sbjct: 933 VTGRNKATPMQIRCKFGSLGTAKGQFNSPHGFCLGVDEEIIVADTNNHRIEVFDKMGALK 992
Query: 233 TSFGSEGSEEGQLKFPRGVAV-DDQGYISVGDSGN--NRIQIFTPDGQFLRAFGCWGSGD 289
FG G EEGQL +PR VAV + G V D GN +R+QIF+ G F+R
Sbjct: 993 FQFGVAGKEEGQLWYPRKVAVMHNNGKFVVCDRGNERSRMQIFSKCGHFMRKIAIR---- 1048
Query: 290 GEFKGLEGVAVMSNGNILVCD 310
+ G+AV + G+I+ D
Sbjct: 1049 -YIDIVAGLAVTAKGHIVAVD 1068
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 22/191 (11%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV-FQSDGTFVGKFGSM 191
KFGS+G GQ PH + +IV+D+NNHR+++FD G + FQ FG
Sbjct: 947 KFGSLGTAKGQFNSPHGFCLGVDEEIIVADTNNHRIEVFDKMGALKFQ--------FGVA 998
Query: 192 GNKAGQLEHPHYIAVSNTN-RVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFP 248
G + GQL +P +AV + N + +V D N R+QIF G + +
Sbjct: 999 GKEEGQLWYPRKVAVMHNNGKFVVCDRGNERSRMQIFSKCGHFMRKIAIR-----YIDIV 1053
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
G+AV +G+I DS + + + + +G+ +R F C + +A+ N + V
Sbjct: 1054 AGLAVTAKGHIVAVDSVSPTVFVISEEGELVRWFDC----SDYMREPSDIAIRDN-DFYV 1108
Query: 309 CDRENHRIQVF 319
CD + H + VF
Sbjct: 1109 CDFKGHCVAVF 1119
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 108/259 (41%), Gaps = 44/259 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G +G D I+VAD++NHR++VF G +FG G + GQL +P +AV + N
Sbjct: 958 FNSPHGFCLGVDEEIIVADTNNHRIEVFDKMGALKFQFGVAGKEEGQLWYPRKVAVMHNN 1017
Query: 157 -RVIVSDSNNH--RVQIFD----------------VNGRVFQSDGTFV------------ 185
+ +V D N R+QIF V G + G V
Sbjct: 1018 GKFVVCDRGNERSRMQIFSKCGHFMRKIAIRYIDIVAGLAVTAKGHIVAVDSVSPTVFVI 1077
Query: 186 ---GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
G+ + + + P IA+ + N V D H V +F +G + G+E
Sbjct: 1078 SEEGELVRWFDCSDYMREPSDIAIRD-NDFYVCDFKGHCVAVFQDDGTFLYRIGNEKVT- 1135
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNRIQI--FTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
FP G+ + + G + +GDS NR + ++ +G F C GL+ +
Sbjct: 1136 ---CFPNGIDISNAGDVLIGDSHGNRFHVACYSREGVLQSEFECPHVKVSRCCGLK---I 1189
Query: 301 MSNGNILVCDRENHRIQVF 319
S G ++ + NH + V
Sbjct: 1190 TSEGYVVTLAKNNHHVLVL 1208
>gi|260821322|ref|XP_002605982.1| hypothetical protein BRAFLDRAFT_92185 [Branchiostoma floridae]
gi|229291319|gb|EEN61992.1| hypothetical protein BRAFLDRAFT_92185 [Branchiostoma floridae]
Length = 502
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 19/208 (9%)
Query: 100 PRGIAVGP----DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN- 154
P +A G D S+V D+ +H V + SDG F + G ++ P + +
Sbjct: 296 PHDVAFGTVNNDDVSVVGGDNMSHYVAFYSSDGKF-----NTGFAIPRVSTPRRLVKNRL 350
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+NRVIV+++ HR ++ +VF +G V FG + L +P I V N + ++V
Sbjct: 351 SNRVIVTETVGHRGEV-----KVFGMNGMLVRSFG----RRQGLMYPTGITVDNKDYILV 401
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+DS+ + ++ NGR + F +GS +GQL P V D +I V DSGN R+++FT
Sbjct: 402 ADSHTAYIYMYQENGRFLLKFAGKGSNKGQLNLPIDVCTDSSRHIIVADSGNQRVELFTS 461
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMS 302
G+ +R G +G VMS
Sbjct: 462 RGKLIRHIATDVDPLSIAMGTDGQLVMS 489
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 27/230 (11%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLE---HPHYIAVSNTN 156
P ++V I VA ++ ++ S G ++ F ++ + G+ + PH +A N
Sbjct: 247 PHRVSVSTSGKIAVA-LEGRQINIYDSRGVYLLHFLTVVKEKGREKTQIAPHDVAFGTVN 305
Query: 157 RVIVS----DSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNR 211
VS D+ +H V + SDG F + G ++ P + + +NR
Sbjct: 306 NDDVSVVGGDNMSHYVAFY-------SSDGKF-----NTGFAIPRVSTPRRLVKNRLSNR 353
Query: 212 VIVSDSNNHR--VQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
VIV+++ HR V++F +NG ++ SFG L +P G+ VD++ YI V DS I
Sbjct: 354 VIVTETVGHRGEVKVFGMNGMLVRSFGRRQG----LMYPTGITVDNKDYILVADSHTAYI 409
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++ +G+FL F GS G+ V S+ +I+V D N R+++F
Sbjct: 410 YMYQENGRFLLKFAGKGSNKGQLNLPIDVCTDSSRHIIVADSGNQRVELF 459
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 14/131 (10%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
+P GI V + I+VADS + ++Q +G F+ KF G+ GQL P + ++
Sbjct: 385 LMYPTGITVDNKDYILVADSHTAYIYMYQENGRFLLKFAGKGSNKGQLNLPIDVCTDSSR 444
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+IV+DS N RV++F G++ + T V P IA+ ++++S+
Sbjct: 445 HIIVADSGNQRVELFTSRGKLIRHIATDVD--------------PLSIAMGTDGQLVMSE 490
Query: 217 SNNHRVQIFDV 227
S+ ++V I D+
Sbjct: 491 SSKNKVTIMDI 501
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 35 YLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF 94
Y + R K +GS G P + I+VADS N RV++ L +
Sbjct: 412 YQENGRFLLKFAGKGSNKGQLNLPIDVCTDSSRHIIVADSGNQRVELFTSRGKLIRHIA- 470
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
P IA+G D +V+++SS ++V +
Sbjct: 471 -TDVDPLSIAMGTDGQLVMSESSKNKVTIM 499
>gi|195047772|ref|XP_001992410.1| GH24221 [Drosophila grimshawi]
gi|193893251|gb|EDV92117.1| GH24221 [Drosophila grimshawi]
Length = 1255
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 173 VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
V GR + KFGS+G GQ PH + +IV+D+NNHR+++FD G +
Sbjct: 974 VTGRNKATPMQIRCKFGSLGTAKGQFNSPHGFCLGVDEEIIVADTNNHRIEVFDKMGALK 1033
Query: 233 TSFGSEGSEEGQLKFPRGVAV-DDQGYISVGDSGN--NRIQIFTPDGQFLRAFGCWGSGD 289
FG G EEGQL +PR VAV + G V D GN +R+QIF+ G F+R
Sbjct: 1034 FQFGVAGKEEGQLWYPRKVAVMHNNGKFVVCDRGNERSRMQIFSKCGHFMRKIAIR---- 1089
Query: 290 GEFKGLEGVAVMSNGNILVCD 310
+ G+AV + G+I+ D
Sbjct: 1090 -YIDIVAGLAVTAKGHIVAVD 1109
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 22/191 (11%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV-FQSDGTFVGKFGSM 191
KFGS+G GQ PH + +IV+D+NNHR+++FD G + FQ FG
Sbjct: 988 KFGSLGTAKGQFNSPHGFCLGVDEEIIVADTNNHRIEVFDKMGALKFQ--------FGVA 1039
Query: 192 GNKAGQLEHPHYIAVSNTN-RVIVSDSNNH--RVQIFDVNGRVITSFGSEGSEEGQLKFP 248
G + GQL +P +AV + N + +V D N R+QIF G + +
Sbjct: 1040 GKEEGQLWYPRKVAVMHNNGKFVVCDRGNERSRMQIFSKCGHFMRKIAIR-----YIDIV 1094
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
G+AV +G+I DS + + + + +G+ +R F C + +A+ N + V
Sbjct: 1095 AGLAVTAKGHIVAVDSVSPTVFVISEEGELVRWFDC----SDYMREPSDIAIRDN-DFYV 1149
Query: 309 CDRENHRIQVF 319
CD + H + VF
Sbjct: 1150 CDFKGHCVAVF 1160
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 108/259 (41%), Gaps = 44/259 (16%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P G +G D I+VAD++NHR++VF G +FG G + GQL +P +AV + N
Sbjct: 999 FNSPHGFCLGVDEEIIVADTNNHRIEVFDKMGALKFQFGVAGKEEGQLWYPRKVAVMHNN 1058
Query: 157 -RVIVSDSNNH--RVQIFD----------------VNGRVFQSDGTFV------------ 185
+ +V D N R+QIF V G + G V
Sbjct: 1059 GKFVVCDRGNERSRMQIFSKCGHFMRKIAIRYIDIVAGLAVTAKGHIVAVDSVSPTVFVI 1118
Query: 186 ---GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEE 242
G+ + + + P IA+ + N V D H V +F +G + G+E
Sbjct: 1119 SEEGELVRWFDCSDYMREPSDIAIRD-NDFYVCDFKGHCVAVFQEDGTFLYRIGNEKVT- 1176
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNRIQI--FTPDGQFLRAFGCWGSGDGEFKGLEGVAV 300
FP G+ + + G + +GDS NR + ++ +G F C GL+ +
Sbjct: 1177 ---CFPNGIDISNAGDVLIGDSHGNRFHVACYSREGALQSEFECPHVKVSRCCGLK---I 1230
Query: 301 MSNGNILVCDRENHRIQVF 319
S G ++ + NH + V
Sbjct: 1231 TSEGYVVTLAKNNHHVLVL 1249
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,142,307,288
Number of Sequences: 23463169
Number of extensions: 222068151
Number of successful extensions: 517410
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1996
Number of HSP's successfully gapped in prelim test: 2573
Number of HSP's that attempted gapping in prelim test: 468111
Number of HSP's gapped (non-prelim): 20995
length of query: 319
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 177
effective length of database: 9,027,425,369
effective search space: 1597854290313
effective search space used: 1597854290313
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)