Your job contains 1 sequence.
>psy13998
RCIPSEAKNINSCFLLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRG
IAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHR
VQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQS
DGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGS
EEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAV
MSNGNILVCDRENHRIQVF
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13998
(319 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
WB|WBGene00003597 - symbol:nhl-1 species:6239 "Caenorhabd... 583 6.7e-56 1
UNIPROTKB|Q03601 - symbol:nhl-1 "RING finger protein nhl-... 583 6.7e-56 1
UNIPROTKB|F1NTC2 - symbol:TRIM71 "E3 ubiquitin-protein li... 486 2.3e-46 1
MGI|MGI:2685973 - symbol:Trim71 "tripartite motif-contain... 490 5.0e-46 1
UNIPROTKB|F6QEU4 - symbol:trim71 "E3 ubiquitin-protein li... 488 6.5e-46 1
UNIPROTKB|Q1PRL4 - symbol:TRIM71 "E3 ubiquitin-protein li... 486 1.5e-45 1
UNIPROTKB|F1Q0E3 - symbol:TRIM71 "Uncharacterized protein... 483 3.1e-45 1
UNIPROTKB|E1BJS7 - symbol:TRIM71 "E3 ubiquitin-protein li... 483 3.1e-45 1
RGD|1566388 - symbol:Trim71 "tripartite motif containing ... 482 3.7e-45 1
UNIPROTKB|Q2Q1W2 - symbol:TRIM71 "E3 ubiquitin-protein li... 482 4.0e-45 1
ZFIN|ZDB-GENE-040128-1 - symbol:trim71 "tripartite motif-... 472 3.9e-44 1
UNIPROTKB|F1NEW3 - symbol:TRIM2 "Uncharacterized protein"... 438 1.4e-40 1
ZFIN|ZDB-GENE-050327-99 - symbol:trim2a "tripartite motif... 433 4.5e-40 1
ZFIN|ZDB-GENE-090312-70 - symbol:trim2b "tripartite motif... 430 5.2e-40 1
UNIPROTKB|A4IF63 - symbol:TRIM2 "Tripartite motif-contain... 431 7.5e-40 1
UNIPROTKB|Q9C040 - symbol:TRIM2 "Tripartite motif-contain... 430 9.7e-40 1
UNIPROTKB|D2GXS7 - symbol:TRIM2 "Tripartite motif-contain... 430 9.7e-40 1
WB|WBGene00003026 - symbol:lin-41 species:6239 "Caenorhab... 425 1.0e-39 2
UNIPROTKB|Q9U489 - symbol:lin-41 "Protein lin-41" species... 425 1.0e-39 2
UNIPROTKB|I3L8U3 - symbol:TRIM2 "Uncharacterized protein"... 430 1.1e-39 1
UNIPROTKB|D3DP09 - symbol:TRIM2 "Tripartite motif-contain... 430 1.1e-39 1
UNIPROTKB|F7H9X2 - symbol:TRIM2 "Tripartite motif-contain... 429 1.2e-39 1
RGD|1310981 - symbol:Trim2 "tripartite motif-containing 2... 427 2.1e-39 1
MGI|MGI:1933163 - symbol:Trim2 "tripartite motif-containi... 426 2.6e-39 1
UNIPROTKB|F5GX85 - symbol:TRIM3 "Tripartite motif-contain... 417 1.4e-38 1
UNIPROTKB|F1RMN8 - symbol:TRIM3 "Uncharacterized protein"... 417 2.5e-38 1
UNIPROTKB|A7MB36 - symbol:TRIM3 "Uncharacterized protein"... 417 2.6e-38 1
UNIPROTKB|E2QVW6 - symbol:TRIM3 "Uncharacterized protein"... 417 2.6e-38 1
UNIPROTKB|O75382 - symbol:TRIM3 "Tripartite motif-contain... 417 2.6e-38 1
MGI|MGI:1860040 - symbol:Trim3 "tripartite motif-containi... 417 2.6e-38 1
RGD|70074 - symbol:Trim3 "tripartite motif-containing 3" ... 407 3.2e-37 1
UNIPROTKB|O70277 - symbol:Trim3 "Tripartite motif-contain... 407 3.2e-37 1
ZFIN|ZDB-GENE-080522-4 - symbol:trim3a "tripartite motif-... 403 9.9e-37 1
ZFIN|ZDB-GENE-070112-1132 - symbol:trim3b "tripartite mot... 400 2.1e-36 1
FB|FBgn0259745 - symbol:wech "wech" species:7227 "Drosoph... 369 5.8e-33 1
UNIPROTKB|D4A8U3 - symbol:Trim3 "Tripartite motif-contain... 365 1.0e-32 1
UNIPROTKB|E9PKS6 - symbol:TRIM3 "Tripartite motif-contain... 336 1.6e-29 1
UNIPROTKB|Q74C86 - symbol:GSU1788 "NHL repeat domain lipo... 313 5.0e-28 1
TIGR_CMR|GSU_1788 - symbol:GSU_1788 "NHL repeat domain pr... 313 5.0e-28 1
UNIPROTKB|Q3AFJ0 - symbol:CHY_0222 "NHL repeat protein" s... 311 8.2e-28 1
TIGR_CMR|CHY_0222 - symbol:CHY_0222 "NHL repeat protein" ... 311 8.2e-28 1
FB|FBgn0010300 - symbol:brat "brain tumor" species:7227 "... 317 3.4e-27 1
WB|WBGene00003559 - symbol:ncl-1 species:6239 "Caenorhabd... 295 5.5e-25 1
UNIPROTKB|Q74FJ1 - symbol:GSU0617 "NHL repeat domain lipo... 278 2.6e-24 1
TIGR_CMR|GSU_0617 - symbol:GSU_0617 "NHL repeat domain pr... 278 2.6e-24 1
UNIPROTKB|Q747P0 - symbol:GSU3225 "NHL repeat domain lipo... 275 5.3e-24 1
TIGR_CMR|GSU_3225 - symbol:GSU_3225 "NHL repeat domain pr... 275 5.3e-24 1
UNIPROTKB|H9L198 - symbol:H9L198 "Uncharacterized protein... 266 3.5e-22 1
UNIPROTKB|Q3Z6H7 - symbol:DET1472 "NHL/RHS/YD repeat prot... 226 4.6e-16 1
TIGR_CMR|DET_1472 - symbol:DET_1472 "NHL/RHS/YD repeat pr... 226 4.6e-16 1
UNIPROTKB|Q747P3 - symbol:GSU3222 "NHL repeat domain lipo... 215 1.2e-15 1
TIGR_CMR|GSU_3222 - symbol:GSU_3222 "NHL repeat domain pr... 215 1.2e-15 1
FB|FBgn0026206 - symbol:mei-P26 "mei-P26" species:7227 "D... 212 2.1e-14 1
UNIPROTKB|Q748T7 - symbol:GSU2914 "NHL repeat domain prot... 196 1.3e-12 1
TIGR_CMR|GSU_2914 - symbol:GSU_2914 "NHL repeat protein" ... 196 1.3e-12 1
WB|WBGene00003598 - symbol:nhl-2 species:6239 "Caenorhabd... 188 1.3e-11 1
UNIPROTKB|Q748W6 - symbol:GSU2885 "NHL repeat domain prot... 171 9.6e-10 1
TIGR_CMR|GSU_2885 - symbol:GSU_2885 "NHL repeat domain pr... 171 9.6e-10 1
UNIPROTKB|Q74A97 - symbol:GSU2493 "NHL repeat domain prot... 157 4.8e-09 1
TIGR_CMR|GSU_2493 - symbol:GSU_2493 "NHL repeat domain pr... 157 4.8e-09 1
UNIPROTKB|Q74EH3 - symbol:GSU0989 "NHL repeat domain prot... 156 3.2e-08 1
TIGR_CMR|GSU_0989 - symbol:GSU_0989 "NHL repeat domain pr... 156 3.2e-08 1
UNIPROTKB|F1PA77 - symbol:NHLRC1 "Uncharacterized protein... 149 7.5e-08 1
UNIPROTKB|Q74A85 - symbol:GSU2505 "Uncharacterized protei... 142 3.0e-07 1
TIGR_CMR|GSU_2505 - symbol:GSU_2505 "NHL repeat domain pr... 142 3.0e-07 1
UNIPROTKB|Q3AD77 - symbol:CHY_1061 "NHL repeat protein" s... 141 3.6e-07 1
TIGR_CMR|CHY_1061 - symbol:CHY_1061 "NHL repeat protein" ... 141 3.6e-07 1
WB|WBGene00020556 - symbol:pamn-1 species:6239 "Caenorhab... 146 4.2e-07 1
MGI|MGI:2444520 - symbol:Nhlrc3 "NHL repeat containing 3"... 141 5.0e-07 1
WB|WBGene00017671 - symbol:pgal-1 species:6239 "Caenorhab... 139 8.6e-07 1
UNIPROTKB|Q5JS37 - symbol:NHLRC3 "NHL repeat-containing p... 138 1.1e-06 1
TAIR|locus:2010728 - symbol:AT1G56500 species:3702 "Arabi... 126 1.4e-06 3
RGD|735081 - symbol:Nhlrc1 "NHL repeat containing 1" spec... 136 2.4e-06 1
UNIPROTKB|Q6VVB1 - symbol:NHLRC1 "E3 ubiquitin-protein li... 135 3.2e-06 1
UNIPROTKB|F1MZH1 - symbol:NHLRC1 "Uncharacterized protein... 132 7.0e-06 1
MGI|MGI:1914116 - symbol:Nhlrc2 "NHL repeat containing 2"... 102 1.8e-05 2
UNIPROTKB|O05871 - symbol:pknD "Serine/threonine-protein ... 135 1.8e-05 2
MGI|MGI:2145264 - symbol:Nhlrc1 "NHL repeat containing 1"... 128 2.0e-05 1
UNIPROTKB|F1RN59 - symbol:PAM "Uncharacterized protein" s... 131 2.1e-05 2
UNIPROTKB|E2R682 - symbol:PAM "Uncharacterized protein" s... 130 2.6e-05 1
UNIPROTKB|F6X870 - symbol:PAM "Uncharacterized protein" s... 130 3.3e-05 1
UNIPROTKB|F1MZN4 - symbol:PAM "Peptidylglycine alpha-hydr... 120 4.1e-05 2
MGI|MGI:97475 - symbol:Pam "peptidylglycine alpha-amidati... 130 4.2e-05 1
UNIPROTKB|F1MZB4 - symbol:PAM "Peptidylglycine alpha-hydr... 120 4.3e-05 2
UNIPROTKB|P10731 - symbol:PAM "Peptidyl-glycine alpha-ami... 120 4.3e-05 2
UNIPROTKB|F1Q4G4 - symbol:PAM "Uncharacterized protein" s... 130 4.4e-05 1
MGI|MGI:3687200 - symbol:Nhlrc4 "NHL repeat containing 4"... 101 8.0e-05 1
ZFIN|ZDB-GENE-060428-1 - symbol:trim32 "tripartite motif-... 130 8.3e-05 2
UNIPROTKB|H7BYD9 - symbol:PAM "Peptidyl-alpha-hydroxyglyc... 123 0.00016 1
UNIPROTKB|F1P141 - symbol:NHLRC1 "Uncharacterized protein... 119 0.00020 1
UNIPROTKB|D4A1N9 - symbol:Pam "Peptidyl-glycine alpha-ami... 123 0.00022 1
UNIPROTKB|F8WE90 - symbol:PAM "Peptidyl-alpha-hydroxyglyc... 123 0.00022 1
UNIPROTKB|Q13049 - symbol:TRIM32 "E3 ubiquitin-protein li... 121 0.00025 1
UNIPROTKB|P19021 - symbol:PAM "Peptidyl-glycine alpha-ami... 123 0.00025 1
RGD|3252 - symbol:Pam "peptidylglycine alpha-amidating mo... 123 0.00025 1
UNIPROTKB|P14925 - symbol:Pam "Peptidyl-glycine alpha-ami... 123 0.00025 1
MGI|MGI:1917057 - symbol:Trim32 "tripartite motif-contain... 120 0.00033 1
RGD|1305238 - symbol:Trim32 "tripartite motif-containing ... 119 0.00042 1
TAIR|locus:2147780 - symbol:AT5G14890 species:3702 "Arabi... 119 0.00050 1
>WB|WBGene00003597 [details] [associations]
symbol:nhl-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IMP] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001258 Pfam:PF01436 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0006915 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG3391
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907
GeneTree:ENSGT00550000074377 KO:K11997 EMBL:Z22177 EMBL:Z19155
PIR:E88549 PIR:S28275 RefSeq:NP_499028.1 ProteinModelPortal:Q03601
SMR:Q03601 DIP:DIP-26359N IntAct:Q03601 MINT:MINT-1095034
STRING:Q03601 PaxDb:Q03601 EnsemblMetazoa:F54G8.4 GeneID:176295
KEGG:cel:CELE_F54G8.4 UCSC:F54G8.4 CTD:176295 WormBase:F54G8.4
HOGENOM:HOG000018096 InParanoid:Q03601 OMA:GQIMERC NextBio:891968
Uniprot:Q03601
Length = 974
Score = 583 (210.3 bits), Expect = 6.7e-56, P = 6.7e-56
Identities = 126/302 (41%), Positives = 176/302 (58%)
Query: 25 GQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP 84
G+ + ++ + R + G +G++ G WPRGI + DSSNHRV C
Sbjct: 682 GRSASREAGEWRARGRPRAVFGRKGAKDGELNWPRGICALSGGLVATCDSSNHRV--CVF 739
Query: 85 HFDLKTNCVFLAFTWPRG---IAVGPDNS---IVVADSSNHRVQVFQSDGTFVGKFGSMG 138
D K F + G A G +S ++V+D NHR+ VF +G + FG G
Sbjct: 740 DKDGKFVRQFGGYGAGAGQLDSAAGLASSKLRVIVSDRYNHRISVFGLEGDHLFSFGGHG 799
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
+ +P +AV + + V+D +NHRVQ+FD NG+ F+ KFGS G+ GQL
Sbjct: 800 QGNAKFNNPWGVAVDDLGSIYVADKDNHRVQVFDKNGQ-------FIAKFGSFGHLPGQL 852
Query: 199 EHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
P +IAVS T+ V VSDS+NHR+ +FD +G + SFG EG GQ KFPRG+A+D Q
Sbjct: 853 NSPLFIAVSRVTHHVYVSDSSNHRISVFDPHGVHLFSFGEEGFHGGQFKFPRGIAIDSQE 912
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
+ + DSGNNRIQ+F GQF+ +FG WG G G+ KG+E V V ++G+I+V DRENHRIQ
Sbjct: 913 NLIIADSGNNRIQVFDAQGQFVSSFGTWGGGAGQLKGVEDVCVTADGSIVVTDRENHRIQ 972
Query: 318 VF 319
+F
Sbjct: 973 IF 974
>UNIPROTKB|Q03601 [details] [associations]
symbol:nhl-1 "RING finger protein nhl-1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001258 Pfam:PF01436 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0006915 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG3391
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907
GeneTree:ENSGT00550000074377 KO:K11997 EMBL:Z22177 EMBL:Z19155
PIR:E88549 PIR:S28275 RefSeq:NP_499028.1 ProteinModelPortal:Q03601
SMR:Q03601 DIP:DIP-26359N IntAct:Q03601 MINT:MINT-1095034
STRING:Q03601 PaxDb:Q03601 EnsemblMetazoa:F54G8.4 GeneID:176295
KEGG:cel:CELE_F54G8.4 UCSC:F54G8.4 CTD:176295 WormBase:F54G8.4
HOGENOM:HOG000018096 InParanoid:Q03601 OMA:GQIMERC NextBio:891968
Uniprot:Q03601
Length = 974
Score = 583 (210.3 bits), Expect = 6.7e-56, P = 6.7e-56
Identities = 126/302 (41%), Positives = 176/302 (58%)
Query: 25 GQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP 84
G+ + ++ + R + G +G++ G WPRGI + DSSNHRV C
Sbjct: 682 GRSASREAGEWRARGRPRAVFGRKGAKDGELNWPRGICALSGGLVATCDSSNHRV--CVF 739
Query: 85 HFDLKTNCVFLAFTWPRG---IAVGPDNS---IVVADSSNHRVQVFQSDGTFVGKFGSMG 138
D K F + G A G +S ++V+D NHR+ VF +G + FG G
Sbjct: 740 DKDGKFVRQFGGYGAGAGQLDSAAGLASSKLRVIVSDRYNHRISVFGLEGDHLFSFGGHG 799
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
+ +P +AV + + V+D +NHRVQ+FD NG+ F+ KFGS G+ GQL
Sbjct: 800 QGNAKFNNPWGVAVDDLGSIYVADKDNHRVQVFDKNGQ-------FIAKFGSFGHLPGQL 852
Query: 199 EHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
P +IAVS T+ V VSDS+NHR+ +FD +G + SFG EG GQ KFPRG+A+D Q
Sbjct: 853 NSPLFIAVSRVTHHVYVSDSSNHRISVFDPHGVHLFSFGEEGFHGGQFKFPRGIAIDSQE 912
Query: 258 YISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQ 317
+ + DSGNNRIQ+F GQF+ +FG WG G G+ KG+E V V ++G+I+V DRENHRIQ
Sbjct: 913 NLIIADSGNNRIQVFDAQGQFVSSFGTWGGGAGQLKGVEDVCVTADGSIVVTDRENHRIQ 972
Query: 318 VF 319
+F
Sbjct: 973 IF 974
>UNIPROTKB|F1NTC2 [details] [associations]
symbol:TRIM71 "E3 ubiquitin-protein ligase TRIM71"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0051246 "regulation of protein metabolic process" evidence=IEA]
[GO:0071310 "cellular response to organic substance" evidence=IEA]
[GO:2000637 "positive regulation of gene silencing by miRNA"
evidence=IEA] InterPro:IPR000315 InterPro:IPR001258
InterPro:IPR001298 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50119
SMART:SM00557 Gene3D:2.60.40.10 InterPro:IPR013783
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622
InterPro:IPR014756 SUPFAM:SSF81296 InterPro:IPR013017
PROSITE:PS51125 GO:GO:0071310 GeneTree:ENSGT00550000074377
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 OMA:PETDFQI
IPI:IPI00600366 EMBL:AADN02001191 Ensembl:ENSGALT00000037671
Uniprot:F1NTC2
Length = 585
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 111/279 (39%), Positives = 154/279 (55%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLKTNCVFLA---FTWP 100
GS G G P G++V + I+VAD SN+R+QV P F K + F P
Sbjct: 314 GSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRP 373
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV+ +++V
Sbjct: 374 AGVACDVSRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAVNAEGKILV 433
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
SD+ NHRVQ+F DG F+ K+G G + P + ++ ++V+D NNH
Sbjct: 434 SDTRNHRVQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNH 486
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+ + + + GSEGS GQ P+GVAVD +G I V DS N+R+QIF +G FL
Sbjct: 487 RLLVIHADCQSARFLGSEGSGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLC 546
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GSG G+ G+AV +G I+V D N+RI VF
Sbjct: 547 KFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF 585
Score = 406 (148.0 bits), Expect = 7.1e-38, P = 7.1e-38
Identities = 96/234 (41%), Positives = 130/234 (55%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-CFP-HFDLK---TNCVFLAFT 98
K G+ GS PG F P G+A IVVAD NHR+Q+ F F LK F
Sbjct: 359 KFGTLGSRPGQFDRPAGVACDVSRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFN 418
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P +AV + I+V+D+ NHRVQ+F DG F+ K+G G + P + ++ +
Sbjct: 419 YPWDVAVNAEGKILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHL 478
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+V+D NNHR+ + + QS F+G GS GN GQ P +AV R+IV+DS
Sbjct: 479 VVTDFNNHRLLVIHAD---CQS-ARFLGSEGS-GN--GQFLRPQGVAVDQEGRIIVADSR 531
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
NHRVQIF+ NG + FG++GS GQ+ P G+AV G I V D GNNRI +F
Sbjct: 532 NHRVQIFESNGSFLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF 585
Score = 349 (127.9 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 72/185 (38%), Positives = 111/185 (60%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FGS G+ G+L P ++V +IV+D +N+R+Q VF+ GTF KFG++G+
Sbjct: 313 FGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQ-------VFKPCGTFHHKFGTLGS 365
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
+ GQ + P +A + R++V+D +NHR+QIF G+ I FG +G++ GQ +P VAV
Sbjct: 366 RPGQFDRPAGVACDVSRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAV 425
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
+ +G I V D+ N+R+Q+F PDG FL +G G+ F GV G+++V D N
Sbjct: 426 NAEGKILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNN 485
Query: 314 HRIQV 318
HR+ V
Sbjct: 486 HRLLV 490
Score = 291 (107.5 bits), Expect = 6.1e-25, P = 6.1e-25
Identities = 78/217 (35%), Positives = 114/217 (52%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ AD S+ Q +GT++ + QLE H ++V N+ I
Sbjct: 244 VVMGPDGNLFGADVSD------QQNGTYLVSYRP------QLEGEHLVSVMMCNQHI--- 288
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R+
Sbjct: 289 -ENSPFKVVVKSGRSYIGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRI 347
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQF+ F
Sbjct: 348 QVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDVSRRIVVADKDNHRIQIFTFEGQFILKF 407
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ +G+F VAV + G ILV D NHR+Q+F
Sbjct: 408 GEKGTKNGQFNYPWDVAVNAEGKILVSDTRNHRVQLF 444
>MGI|MGI:2685973 [details] [associations]
symbol:Trim71 "tripartite motif-containing 71" species:10090
"Mus musculus" [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008543 "fibroblast growth
factor receptor signaling pathway" evidence=IMP] [GO:0010586 "miRNA
metabolic process" evidence=IDA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0021915 "neural tube development" evidence=IDA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0035198
"miRNA binding" evidence=IDA] [GO:0035278 "negative regulation of
translation involved in gene silencing by miRNA" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051246
"regulation of protein metabolic process" evidence=IDA] [GO:0051865
"protein autoubiquitination" evidence=IDA] [GO:0060964 "regulation
of gene silencing by miRNA" evidence=IGI;IMP] [GO:0071310 "cellular
response to organic substance" evidence=IDA] [GO:0072089 "stem cell
proliferation" evidence=IMP] [GO:2000177 "regulation of neural
precursor cell proliferation" evidence=IMP] [GO:2000637 "positive
regulation of gene silencing by miRNA" evidence=IMP;IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001258
InterPro:IPR001298 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00557
UniPathway:UPA00143 MGI:MGI:2685973 Prosite:PS00518 GO:GO:0008543
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0000082
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0001843 GO:GO:0035198 GO:GO:0010586
GO:GO:0000932 GO:GO:0035278 GO:GO:0004842 GO:GO:2000637
eggNOG:COG3391 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GO:GO:0051865 GeneTree:ENSGT00550000074377
GO:GO:0072089 InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
OMA:PETDFQI GO:GO:2000177 KO:K12035 CTD:131405 HOGENOM:HOG000006755
HOVERGEN:HBG081916 OrthoDB:EOG4894KX EMBL:DQ005956 IPI:IPI00668432
RefSeq:NP_001035968.1 UniGene:Mm.17857 ProteinModelPortal:Q1PSW8
SMR:Q1PSW8 STRING:Q1PSW8 PhosphoSite:Q1PSW8 PRIDE:Q1PSW8
Ensembl:ENSMUST00000111816 GeneID:636931 KEGG:mmu:636931
UCSC:uc009rxp.1 InParanoid:Q1PSW8 NextBio:423826 Bgee:Q1PSW8
CleanEx:MM_TRIM71 Genevestigator:Q1PSW8 Uniprot:Q1PSW8
Length = 855
Score = 490 (177.5 bits), Expect = 5.0e-46, P = 5.0e-46
Identities = 109/279 (39%), Positives = 157/279 (56%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLKTNCVFLA---FTWP 100
GS G G P G++V + I+VAD SN+R+QV P F K + F P
Sbjct: 584 GSEGDGEGKLCRPWGVSVDKEGFIIVADRSNNRIQVFKPCGSFHHKFGTLGSRPGQFDRP 643
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+A I+VAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +++V
Sbjct: 644 AGVACDASRRIIVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILV 703
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
SD+ NHR+Q+F DG F+ K+G G+ + P +A +N ++V+D NNH
Sbjct: 704 SDTRNHRIQLFG-------PDGVFLNKYGFEGSLWKHFDSPRGVAFNNEGHLVVTDFNNH 756
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+ + + + GSEGS GQ P+GVAVD +G I V DS N+R+Q+F +G FL
Sbjct: 757 RLLVIHPDCQSARFLGSEGSGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFEANGSFLC 816
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 817 KFGAQGSGFGQMDRPSGIAVTPDGLIVVVDFGNNRILIF 855
Score = 414 (150.8 bits), Expect = 8.7e-38, P = 8.7e-38
Identities = 96/234 (41%), Positives = 132/234 (56%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-CFP-HFDLK---TNCVFLAFT 98
K G+ GS PG F P G+A I+VAD NHR+Q+ F F LK F
Sbjct: 629 KFGTLGSRPGQFDRPAGVACDASRRIIVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFN 688
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P +AV + I+V+D+ NHR+Q+F DG F+ K+G G+ + P +A +N +
Sbjct: 689 YPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGSLWKHFDSPRGVAFNNEGHL 748
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+V+D NNHR+ + + QS F+G GS GN GQ P +AV R+IV+DS
Sbjct: 749 VVTDFNNHRLLVIHPD---CQS-ARFLGSEGS-GN--GQFLRPQGVAVDQEGRIIVADSR 801
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
NHRVQ+F+ NG + FG++GS GQ+ P G+AV G I V D GNNRI IF
Sbjct: 802 NHRVQMFEANGSFLCKFGAQGSGFGQMDRPSGIAVTPDGLIVVVDFGNNRILIF 855
Score = 295 (108.9 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 80/217 (36%), Positives = 115/217 (52%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT++ + QLE H ++V+ N+ I
Sbjct: 514 VVLGPDGNLFGAEVSD------QQNGTYIVSYRP------QLEGEHLVSVTLYNQHI--- 558
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R+
Sbjct: 559 -ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDGEGKLCRPWGVSVDKEGFIIVADRSNNRI 617
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL F
Sbjct: 618 QVFKPCGSFHHKFGTLGSRPGQFDRPAGVACDASRRIIVADKDNHRIQIFTFEGQFLLKF 677
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 678 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 714
>UNIPROTKB|F6QEU4 [details] [associations]
symbol:trim71 "E3 ubiquitin-protein ligase TRIM71"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=ISS] [GO:0000932
"cytoplasmic mRNA processing body" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=ISS]
[GO:0010586 "miRNA metabolic process" evidence=ISS] [GO:0021915
"neural tube development" evidence=ISS] [GO:0035198 "miRNA binding"
evidence=ISS] [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0060964 "regulation
of gene silencing by miRNA" evidence=ISS] [GO:0072089 "stem cell
proliferation" evidence=ISS] [GO:2000177 "regulation of neural
precursor cell proliferation" evidence=ISS] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 SMART:SM00557 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0008543 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 GO:GO:0000082 Gene3D:2.120.10.30 InterPro:IPR011042
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 GO:GO:0035198 GO:GO:0010586
GO:GO:0000932 GO:GO:0035278 GO:GO:0004842 GO:GO:0021915
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907 GO:GO:0051865
GeneTree:ENSGT00550000074377 GO:GO:0072089 InterPro:IPR017868
Pfam:PF00630 GO:GO:0060964 PROSITE:PS50194 OMA:PETDFQI
GO:GO:2000177 EMBL:AAMC01073953 EMBL:AAMC01073954 EMBL:AAMC01073955
EMBL:AAMC01073956 EMBL:AAMC01073957 Ensembl:ENSXETT00000011768
Uniprot:F6QEU4
Length = 814
Score = 488 (176.8 bits), Expect = 6.5e-46, P = 6.5e-46
Identities = 113/279 (40%), Positives = 154/279 (55%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLKTNCVFLA---FTWP 100
G G G P G+ V + I+VAD SN+RVQ+ P F K + F P
Sbjct: 543 GGEGDHDGKLCRPWGVCVDREGYIIVADRSNNRVQIFKPCGTFHHKFGSLGSRPGQFDRP 602
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+A IVVAD NHRVQ+F +G F+ KFG G K GQ +P +AV++ +++V
Sbjct: 603 AGVACDNSRRIVVADKDNHRVQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILV 662
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
SD+ NHRVQ+F DGTF+ K+G G + P +A S ++V+D NNH
Sbjct: 663 SDTRNHRVQLFG-------PDGTFLNKYGFEGALWKHFDSPRGVAFSQDGYLVVTDFNNH 715
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+ I + + G+EG+ GQ P+GVAVD +G I V DS N+R+QIF P+G FL
Sbjct: 716 RLLIIKPDCQSAHFLGTEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFEPNGSFLC 775
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GSG G+ G+AV +G I+V D N+RI F
Sbjct: 776 KFGTQGSGFGQMDRPSGIAVTPDGTIVVVDFGNNRILAF 814
Score = 407 (148.3 bits), Expect = 4.3e-37, P = 4.3e-37
Identities = 101/234 (43%), Positives = 130/234 (55%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-CFP-HFDLK---TNCVFLAFT 98
K GS GS PG F P G+A IVVAD NHRVQ+ F F LK F
Sbjct: 588 KFGSLGSRPGQFDRPAGVACDNSRRIVVADKDNHRVQIFTFEGQFLLKFGEKGTKNGQFN 647
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P +AV + I+V+D+ NHRVQ+F DGTF+ K+G G + P +A S +
Sbjct: 648 YPWDVAVNSEGKILVSDTRNHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFSQDGYL 707
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+V+D NNHR+ I + QS F+G G+ GN GQ P +AV R+IV+DS
Sbjct: 708 VVTDFNNHRLLIIKPD---CQS-AHFLGTEGT-GN--GQFLRPQGVAVDQEGRIIVADSR 760
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
NHRVQIF+ NG + FG++GS GQ+ P G+AV G I V D GNNRI F
Sbjct: 761 NHRVQIFEPNGSFLCKFGTQGSGFGQMDRPSGIAVTPDGTIVVVDFGNNRILAF 814
Score = 361 (132.1 bits), Expect = 4.0e-32, P = 4.0e-32
Identities = 74/185 (40%), Positives = 111/185 (60%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G+ G+L P + V +IV+D +N+RVQIF + GTF KFGS+G+
Sbjct: 542 FGGEGDHDGKLCRPWGVCVDREGYIIVADRSNNRVQIF-------KPCGTFHHKFGSLGS 594
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
+ GQ + P +A N+ R++V+D +NHRVQIF G+ + FG +G++ GQ +P VAV
Sbjct: 595 RPGQFDRPAGVACDNSRRIVVADKDNHRVQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAV 654
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
+ +G I V D+ N+R+Q+F PDG FL +G G+ F GVA +G ++V D N
Sbjct: 655 NSEGKILVSDTRNHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFSQDGYLVVTDFNN 714
Query: 314 HRIQV 318
HR+ +
Sbjct: 715 HRLLI 719
Score = 300 (110.7 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 81/217 (37%), Positives = 116/217 (53%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT++ + QLE H I+V N+ I +
Sbjct: 473 LVMGPDGNLFAAEVSD------QLNGTYLVSYRP------QLEGEHLISVMVCNQHI--E 518
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
++ +V + +GR + G FG G+ G+L P + V +IV+D +N+RV
Sbjct: 519 NSPFKVNV--KSGRCYLGIGLPTLSFGGEGDHDGKLCRPWGVCVDREGYIIVADRSNNRV 576
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
QIF G FGS GS GQ P GVA D+ I V D N+R+QIFT +GQFL F
Sbjct: 577 QIFKPCGTFHHKFGSLGSRPGQFDRPAGVACDNSRRIVVADKDNHRVQIFTFEGQFLLKF 636
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ +G+F VAV S G ILV D NHR+Q+F
Sbjct: 637 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRVQLF 673
>UNIPROTKB|Q1PRL4 [details] [associations]
symbol:TRIM71 "E3 ubiquitin-protein ligase TRIM71"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=ISS] [GO:0008543 "fibroblast growth factor receptor
signaling pathway" evidence=ISS] [GO:0010586 "miRNA metabolic
process" evidence=ISS] [GO:0021915 "neural tube development"
evidence=ISS] [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0060964 "regulation
of gene silencing by miRNA" evidence=ISS] [GO:0072089 "stem cell
proliferation" evidence=ISS] [GO:2000177 "regulation of neural
precursor cell proliferation" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0000932
"cytoplasmic mRNA processing body" evidence=ISS] [GO:0035198 "miRNA
binding" evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 InterPro:IPR001298 Pfam:PF00643 Pfam:PF01436
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
SMART:SM00557 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0008543
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0000082
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0035198 GO:GO:0010586 GO:GO:0000932
GO:GO:0035278 GO:GO:0004842 GO:GO:0021915 eggNOG:COG3391
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907 GO:GO:0051865
GeneTree:ENSGT00550000074377 GO:GO:0072089 InterPro:IPR017868
Pfam:PF00630 GO:GO:0060964 PROSITE:PS50194 GO:GO:2000177 KO:K12035
EMBL:DQ278876 EMBL:DQ117917 EMBL:AM087669 IPI:IPI00600366
RefSeq:NP_001032352.2 UniGene:Gga.24744 UniGene:Gga.53063
ProteinModelPortal:Q1PRL4 Ensembl:ENSGALT00000031151 GeneID:428445
KEGG:gga:428445 CTD:131405 HOGENOM:HOG000006755 HOVERGEN:HBG081916
InParanoid:Q1PRL4 OrthoDB:EOG4894KX NextBio:20829435 Uniprot:Q1PRL4
Length = 876
Score = 486 (176.1 bits), Expect = 1.5e-45, P = 1.5e-45
Identities = 111/279 (39%), Positives = 154/279 (55%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLKTNCVFLA---FTWP 100
GS G G P G++V + I+VAD SN+R+QV P F K + F P
Sbjct: 605 GSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRP 664
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV+ +++V
Sbjct: 665 AGVACDVSRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAVNAEGKILV 724
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
SD+ NHRVQ+F DG F+ K+G G + P + ++ ++V+D NNH
Sbjct: 725 SDTRNHRVQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNH 777
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+ + + + GSEGS GQ P+GVAVD +G I V DS N+R+QIF +G FL
Sbjct: 778 RLLVIHADCQSARFLGSEGSGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLC 837
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GSG G+ G+AV +G I+V D N+RI VF
Sbjct: 838 KFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF 876
Score = 406 (148.0 bits), Expect = 6.8e-37, P = 6.8e-37
Identities = 96/234 (41%), Positives = 130/234 (55%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-CFP-HFDLK---TNCVFLAFT 98
K G+ GS PG F P G+A IVVAD NHR+Q+ F F LK F
Sbjct: 650 KFGTLGSRPGQFDRPAGVACDVSRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFN 709
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P +AV + I+V+D+ NHRVQ+F DG F+ K+G G + P + ++ +
Sbjct: 710 YPWDVAVNAEGKILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHL 769
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+V+D NNHR+ + + QS F+G GS GN GQ P +AV R+IV+DS
Sbjct: 770 VVTDFNNHRLLVIHAD---CQS-ARFLGSEGS-GN--GQFLRPQGVAVDQEGRIIVADSR 822
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
NHRVQIF+ NG + FG++GS GQ+ P G+AV G I V D GNNRI +F
Sbjct: 823 NHRVQIFESNGSFLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF 876
Score = 349 (127.9 bits), Expect = 9.3e-31, P = 9.3e-31
Identities = 72/185 (38%), Positives = 111/185 (60%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FGS G+ G+L P ++V +IV+D +N+R+Q VF+ GTF KFG++G+
Sbjct: 604 FGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQ-------VFKPCGTFHHKFGTLGS 656
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
+ GQ + P +A + R++V+D +NHR+QIF G+ I FG +G++ GQ +P VAV
Sbjct: 657 RPGQFDRPAGVACDVSRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAV 716
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
+ +G I V D+ N+R+Q+F PDG FL +G G+ F GV G+++V D N
Sbjct: 717 NAEGKILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNN 776
Query: 314 HRIQV 318
HR+ V
Sbjct: 777 HRLLV 781
Score = 291 (107.5 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 78/217 (35%), Positives = 114/217 (52%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ AD S+ Q +GT++ + QLE H ++V N+ I
Sbjct: 535 VVMGPDGNLFGADVSD------QQNGTYLVSYRP------QLEGEHLVSVMMCNQHI--- 579
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R+
Sbjct: 580 -ENSPFKVVVKSGRSYIGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRI 638
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQF+ F
Sbjct: 639 QVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDVSRRIVVADKDNHRIQIFTFEGQFILKF 698
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ +G+F VAV + G ILV D NHR+Q+F
Sbjct: 699 GEKGTKNGQFNYPWDVAVNAEGKILVSDTRNHRVQLF 735
>UNIPROTKB|F1Q0E3 [details] [associations]
symbol:TRIM71 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 SMART:SM00557 Prosite:PS00518
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GeneTree:ENSGT00550000074377 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 OMA:PETDFQI KO:K12035 CTD:131405
EMBL:AAEX03013462 EMBL:AAEX03013463 RefSeq:XP_534214.3
Ensembl:ENSCAFT00000039591 GeneID:477014 KEGG:cfa:477014
Uniprot:F1Q0E3
Length = 868
Score = 483 (175.1 bits), Expect = 3.1e-45, P = 3.1e-45
Identities = 110/279 (39%), Positives = 156/279 (55%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLKTNCVFLA---FTWP 100
GS G G P G++V + IVVAD SN+R+QV P F K + F P
Sbjct: 597 GSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRP 656
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+A IVVAD NHR+QVF +G F+ KFG G K GQ +P +AV++ +++V
Sbjct: 657 AGVACDTSRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILV 716
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
SD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D NNH
Sbjct: 717 SDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNH 769
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G FL
Sbjct: 770 RLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLC 829
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 830 KFGTQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF 868
Score = 403 (146.9 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 96/234 (41%), Positives = 131/234 (55%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-CFP-HFDLK---TNCVFLAFT 98
K G+ GS PG F P G+A IVVAD NHR+QV F F LK F
Sbjct: 642 KFGTLGSRPGQFDRPAGVACDTSRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFN 701
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P +AV + I+V+D+ NHR+Q+F DG F+ K+G G + P +A ++ +
Sbjct: 702 YPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHL 761
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+V+D NNHR+ + + QS F+G G+ GN GQ P +AV R+IV+DS
Sbjct: 762 VVTDFNNHRLLVIHPD---CQS-ARFLGSEGT-GN--GQFLRPQGVAVDQEGRIIVADSR 814
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
NHRVQ+F+ NG + FG++GS GQ+ P G+AV G I V D GNNRI IF
Sbjct: 815 NHRVQMFESNGSFLCKFGTQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF 868
Score = 356 (130.4 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 77/210 (36%), Positives = 124/210 (59%)
Query: 115 DSSNHRVQVFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
++S +V V +S ++VG FGS G+ G+L P ++V ++V+D +N+R+
Sbjct: 572 ENSPFKV-VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRI 630
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
Q VF+ GTF KFG++G++ GQ + P +A + R++V+D +NHR+Q+F
Sbjct: 631 Q-------VFKPCGTFHHKFGTLGSRPGQFDRPAGVACDTSRRIVVADKDNHRIQVFTFE 683
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G+ + FG +G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+
Sbjct: 684 GQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGAL 743
Query: 289 DGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
F GVA G+++V D NHR+ V
Sbjct: 744 WKHFDSPRGVAFNHEGHLVVTDFNNHRLLV 773
Score = 299 (110.3 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 79/217 (36%), Positives = 115/217 (52%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 527 VVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTMCNQHI--- 571
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R+
Sbjct: 572 -ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRI 630
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQ+FT +GQFL F
Sbjct: 631 QVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDTSRRIVVADKDNHRIQVFTFEGQFLLKF 690
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 691 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 727
>UNIPROTKB|E1BJS7 [details] [associations]
symbol:TRIM71 "E3 ubiquitin-protein ligase TRIM71"
species:9913 "Bos taurus" [GO:0035198 "miRNA binding" evidence=ISS]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:2000177 "regulation of neural precursor cell proliferation"
evidence=ISS] [GO:0072089 "stem cell proliferation" evidence=ISS]
[GO:0060964 "regulation of gene silencing by miRNA" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISS] [GO:0021915 "neural tube development"
evidence=ISS] [GO:0010586 "miRNA metabolic process" evidence=ISS]
[GO:0008543 "fibroblast growth factor receptor signaling pathway"
evidence=ISS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=ISS] [GO:2000637 "positive regulation of gene silencing by
miRNA" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001258
InterPro:IPR001298 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00557
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0008543 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0000082 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296 GO:GO:0001843
GO:GO:0035198 GO:GO:0010586 GO:GO:0000932 GO:GO:0035278
GO:GO:0004842 GO:GO:0021915 InterPro:IPR013017 PROSITE:PS51125
GO:GO:0051865 GeneTree:ENSGT00550000074377 GO:GO:0072089
InterPro:IPR017868 Pfam:PF00630 GO:GO:0060964 PROSITE:PS50194
EMBL:HQ826939 EMBL:DAAA02053578 IPI:IPI00688562
Ensembl:ENSBTAT00000030874 OMA:PETDFQI GO:GO:2000177 Uniprot:E1BJS7
Length = 868
Score = 483 (175.1 bits), Expect = 3.1e-45, P = 3.1e-45
Identities = 109/279 (39%), Positives = 156/279 (55%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLKTNCVFLA---FTWP 100
GS G G P G++V + IVVAD SN+R+QV P F K + F P
Sbjct: 597 GSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRP 656
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +++V
Sbjct: 657 AGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILV 716
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
SD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D NNH
Sbjct: 717 SDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNH 769
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G FL
Sbjct: 770 RLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLC 829
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GSG G+ G+AV +G I+V D N+RI +F
Sbjct: 830 KFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF 868
Score = 402 (146.6 bits), Expect = 1.8e-36, P = 1.8e-36
Identities = 95/234 (40%), Positives = 131/234 (55%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-CFP-HFDLK---TNCVFLAFT 98
K G+ GS PG F P G+A IVVAD NHR+Q+ F F LK F
Sbjct: 642 KFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFN 701
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P +AV + I+V+D+ NHR+Q+F DG F+ K+G G + P +A ++ +
Sbjct: 702 YPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHL 761
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+V+D NNHR+ + + QS F+G G+ GN GQ P +AV R+IV+DS
Sbjct: 762 VVTDFNNHRLLVIHPD---CQS-ARFLGSEGT-GN--GQFLRPQGVAVDQEGRIIVADSR 814
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
NHRVQ+F+ NG + FG++GS GQ+ P G+AV G I V D GNNRI IF
Sbjct: 815 NHRVQMFESNGSFLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF 868
Score = 350 (128.3 bits), Expect = 7.1e-31, P = 7.1e-31
Identities = 77/210 (36%), Positives = 123/210 (58%)
Query: 115 DSSNHRVQVFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
++S +V V +S ++VG FGS G+ G+L P ++V ++V+D +N+R+
Sbjct: 572 ENSPFKV-VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRI 630
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
Q VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+QIF
Sbjct: 631 Q-------VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFE 683
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G+ + FG +G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+
Sbjct: 684 GQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGAL 743
Query: 289 DGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
F GVA G+++V D NHR+ V
Sbjct: 744 WKHFDSPRGVAFNHEGHLVVTDFNNHRLLV 773
Score = 298 (110.0 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 80/217 (36%), Positives = 115/217 (52%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 527 VVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI--- 571
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V ++V+D +N+R+
Sbjct: 572 -ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRI 630
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL F
Sbjct: 631 QVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKF 690
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 691 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 727
>RGD|1566388 [details] [associations]
symbol:Trim71 "tripartite motif containing 71, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=ISO;ISS] [GO:0000932
"cytoplasmic mRNA processing body" evidence=ISO;ISS] [GO:0001843
"neural tube closure" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008543 "fibroblast growth
factor receptor signaling pathway" evidence=ISO;ISS] [GO:0010586
"miRNA metabolic process" evidence=ISO;ISS] [GO:0021915 "neural
tube development" evidence=ISO;ISS] [GO:0035198 "miRNA binding"
evidence=ISO;ISS] [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=ISO;ISS] [GO:0051246
"regulation of protein metabolic process" evidence=ISO] [GO:0051865
"protein autoubiquitination" evidence=ISO;ISS] [GO:0060964
"regulation of gene silencing by miRNA" evidence=ISO;ISS]
[GO:0071310 "cellular response to organic substance" evidence=ISO]
[GO:0072089 "stem cell proliferation" evidence=ISO;ISS] [GO:2000177
"regulation of neural precursor cell proliferation"
evidence=ISO;ISS] [GO:2000637 "positive regulation of gene
silencing by miRNA" evidence=IEA;ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 SMART:SM00557 UniPathway:UPA00143
RGD:1566388 Prosite:PS00518 GO:GO:0008543 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0000082 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296 GO:GO:0001843
GO:GO:0035198 GO:GO:0010586 GO:GO:0000932 GO:GO:0035278
GO:GO:0004842 GO:GO:0021915 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GO:GO:0051865 GeneTree:ENSGT00550000074377
GO:GO:0072089 InterPro:IPR017868 Pfam:PF00630 GO:GO:0060964
PROSITE:PS50194 GO:GO:2000177 KO:K12035 OrthoDB:EOG4894KX
IPI:IPI00371134 RefSeq:NP_001178730.1 UniGene:Rn.225076
Ensembl:ENSRNOT00000047198 GeneID:301042 KEGG:rno:301042
UCSC:RGD:1566388 NextBio:647998 Uniprot:D3ZVM4
Length = 855
Score = 482 (174.7 bits), Expect = 3.7e-45, P = 3.7e-45
Identities = 108/279 (38%), Positives = 156/279 (55%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLKTNCVFLA---FTWP 100
GS G G P G++V + I+VAD SN+R+QV P F K + F P
Sbjct: 584 GSEGDGEGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGSFHHKFGTLGSRPGQFDRP 643
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +++V
Sbjct: 644 AGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILV 703
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
SD+ NHR+Q+F DG F+ K+G G+ + P +A ++ ++V+D NNH
Sbjct: 704 SDTRNHRIQLFG-------PDGVFLNKYGFEGSLWKHFDSPRGVAFNHEGHLVVTDFNNH 756
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G FL
Sbjct: 757 RLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFEANGSFLC 816
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GSG G+ G+AV G I+V D N+RI +F
Sbjct: 817 KFGAQGSGFGQMDRPSGIAVTPEGLIVVVDFGNNRILIF 855
Score = 409 (149.0 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 95/234 (40%), Positives = 133/234 (56%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-CFP-HFDLK---TNCVFLAFT 98
K G+ GS PG F P G+A IVVAD NHR+Q+ F F LK F
Sbjct: 629 KFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFN 688
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P +AV + I+V+D+ NHR+Q+F DG F+ K+G G+ + P +A ++ +
Sbjct: 689 YPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGSLWKHFDSPRGVAFNHEGHL 748
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+V+D NNHR+ + + QS F+G G+ GN GQ P +AV R+IV+DS
Sbjct: 749 VVTDFNNHRLLVIHPD---CQS-ARFLGSEGT-GN--GQFLRPQGVAVDQEGRIIVADSR 801
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
NHRVQ+F+ NG + FG++GS GQ+ P G+AV +G I V D GNNRI IF
Sbjct: 802 NHRVQMFEANGSFLCKFGAQGSGFGQMDRPSGIAVTPEGLIVVVDFGNNRILIF 855
Score = 355 (130.0 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 89/261 (34%), Positives = 139/261 (53%)
Query: 61 IAVGPDNSIV---VADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSS 117
+ +GPD ++ V+D N V + L+ + + + I P VV S
Sbjct: 514 VVLGPDGNLFGAEVSDQQNGTYVVSYRP-QLEGEHLVSVTLYNQHIENSPFK--VVVKSG 570
Query: 118 NHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 177
V + G V FGS G+ G+L P ++V +IV+D +N+R+Q V
Sbjct: 571 RSYVGI----GLPVLSFGSEGDGEGKLCRPWGVSVDKEGYIIVADRSNNRIQ-------V 619
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS 237
F+ G+F KFG++G++ GQ + P +A + R++V+D +NHR+QIF G+ + FG
Sbjct: 620 FKPCGSFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGE 679
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
+G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G GS F G
Sbjct: 680 KGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGSLWKHFDSPRG 739
Query: 298 VAVMSNGNILVCDRENHRIQV 318
VA G+++V D NHR+ V
Sbjct: 740 VAFNHEGHLVVTDFNNHRLLV 760
Score = 304 (112.1 bits), Expect = 6.0e-26, P = 6.0e-26
Identities = 82/217 (37%), Positives = 116/217 (53%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 514 VVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLYNQHI--- 558
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G V FGS G+ G+L P ++V +IV+D +N+R+
Sbjct: 559 -ENSPFKVVVKSGRSYVGIGLPVLSFGSEGDGEGKLCRPWGVSVDKEGYIIVADRSNNRI 617
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL F
Sbjct: 618 QVFKPCGSFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKF 677
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 678 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 714
>UNIPROTKB|Q2Q1W2 [details] [associations]
symbol:TRIM71 "E3 ubiquitin-protein ligase TRIM71"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:2000637 "positive regulation of gene silencing by miRNA"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=ISS] [GO:0008543 "fibroblast growth factor receptor
signaling pathway" evidence=ISS] [GO:0010586 "miRNA metabolic
process" evidence=ISS] [GO:0021915 "neural tube development"
evidence=ISS] [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0060964 "regulation
of gene silencing by miRNA" evidence=ISS] [GO:0072089 "stem cell
proliferation" evidence=ISS] [GO:2000177 "regulation of neural
precursor cell proliferation" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0000932
"cytoplasmic mRNA processing body" evidence=ISS] [GO:0035198 "miRNA
binding" evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 InterPro:IPR001298 Pfam:PF00643 Pfam:PF01436
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
SMART:SM00557 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0008543
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0000082
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0001843 GO:GO:0035198 GO:GO:0010586
GO:GO:0000932 GO:GO:0035278 GO:GO:0004842 GO:GO:0021915
eggNOG:COG3391 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GO:GO:0051865 GO:GO:0072089 InterPro:IPR017868
Pfam:PF00630 GO:GO:0060964 PROSITE:PS50194 OMA:PETDFQI
GO:GO:2000177 KO:K12035 CTD:131405 HOGENOM:HOG000006755
HOVERGEN:HBG081916 OrthoDB:EOG4894KX EMBL:DQ232881 IPI:IPI00719053
RefSeq:NP_001034200.1 UniGene:Hs.567678 HSSP:P21333
ProteinModelPortal:Q2Q1W2 SMR:Q2Q1W2 STRING:Q2Q1W2
PhosphoSite:Q2Q1W2 DMDM:121941685 PaxDb:Q2Q1W2 PRIDE:Q2Q1W2
Ensembl:ENST00000383763 GeneID:131405 KEGG:hsa:131405
UCSC:uc003cff.3 GeneCards:GC03P032859 HGNC:HGNC:32669 HPA:HPA038142
neXtProt:NX_Q2Q1W2 PharmGKB:PA144596246 InParanoid:Q2Q1W2
GenomeRNAi:131405 NextBio:82904 Bgee:Q2Q1W2 CleanEx:HS_TRIM71
Genevestigator:Q2Q1W2 Uniprot:Q2Q1W2
Length = 868
Score = 482 (174.7 bits), Expect = 4.0e-45, P = 4.0e-45
Identities = 108/279 (38%), Positives = 156/279 (55%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLKTNCVFLA---FTWP 100
GS G G P G++V + I+VAD SN+R+QV P F K + F P
Sbjct: 597 GSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRP 656
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+A IVVAD NHR+Q+F +G F+ KFG G K GQ +P +AV++ +++V
Sbjct: 657 AGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILV 716
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
SD+ NHR+Q+F DG F+ K+G G + P +A ++ ++V+D NNH
Sbjct: 717 SDTRNHRIQLFG-------PDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNH 769
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+ + + + GSEG+ GQ P+GVAVD +G I V DS N+R+Q+F +G FL
Sbjct: 770 RLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLC 829
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG GSG G+ G+A+ +G I+V D N+RI VF
Sbjct: 830 KFGAQGSGFGQMDRPSGIAITPDGMIVVVDFGNNRILVF 868
Score = 400 (145.9 bits), Expect = 2.9e-36, P = 2.9e-36
Identities = 93/234 (39%), Positives = 131/234 (55%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-CFP-HFDLK---TNCVFLAFT 98
K G+ GS PG F P G+A IVVAD NHR+Q+ F F LK F
Sbjct: 642 KFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFN 701
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P +AV + I+V+D+ NHR+Q+F DG F+ K+G G + P +A ++ +
Sbjct: 702 YPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHL 761
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+V+D NNHR+ + + QS F+G G+ GN GQ P +AV R+IV+DS
Sbjct: 762 VVTDFNNHRLLVIHPD---CQS-ARFLGSEGT-GN--GQFLRPQGVAVDQEGRIIVADSR 814
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
NHRVQ+F+ NG + FG++GS GQ+ P G+A+ G I V D GNNRI +F
Sbjct: 815 NHRVQMFESNGSFLCKFGAQGSGFGQMDRPSGIAITPDGMIVVVDFGNNRILVF 868
Score = 351 (128.6 bits), Expect = 5.5e-31, P = 5.5e-31
Identities = 78/210 (37%), Positives = 123/210 (58%)
Query: 115 DSSNHRVQVFQSDGTFVG------KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
++S +V V +S ++VG FGS G+ G+L P ++V +IV+D +N+R+
Sbjct: 572 ENSPFKV-VVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRI 630
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
Q VF+ G F KFG++G++ GQ + P +A + R++V+D +NHR+QIF
Sbjct: 631 Q-------VFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFE 683
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G+ + FG +G++ GQ +P VAV+ +G I V D+ N+RIQ+F PDG FL +G G+
Sbjct: 684 GQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGAL 743
Query: 289 DGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
F GVA G+++V D NHR+ V
Sbjct: 744 WKHFDSPRGVAFNHEGHLVVTDFNNHRLLV 773
Score = 299 (110.3 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 81/217 (37%), Positives = 115/217 (52%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ +GPD ++ A+ S+ Q +GT+V + QLE H ++V+ N+ I
Sbjct: 527 VVLGPDGNLFGAEVSD------QQNGTYVVSYRP------QLEGEHLVSVTLCNQHI--- 571
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
N ++ +GR + G FGS G+ G+L P ++V +IV+D +N+R+
Sbjct: 572 -ENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRI 630
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
Q+F G FG+ GS GQ P GVA D I V D N+RIQIFT +GQFL F
Sbjct: 631 QVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKF 690
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ +G+F VAV S G ILV D NHRIQ+F
Sbjct: 691 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLF 727
>ZFIN|ZDB-GENE-040128-1 [details] [associations]
symbol:trim71 "tripartite motif-containing 71"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0010172
"embryonic body morphogenesis" evidence=IMP] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=ISS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=ISS]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=ISS] [GO:0072089 "stem cell
proliferation" evidence=ISS] [GO:2000177 "regulation of neural
precursor cell proliferation" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0010586
"miRNA metabolic process" evidence=ISS] [GO:0035198 "miRNA binding"
evidence=ISS] [GO:0060964 "regulation of gene silencing by miRNA"
evidence=ISS] [GO:0051865 "protein autoubiquitination"
evidence=ISS] [GO:0021915 "neural tube development" evidence=ISS]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 SMART:SM00557 UniPathway:UPA00143
Prosite:PS00518 ZFIN:ZDB-GENE-040128-1 GO:GO:0008543
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0000082
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0035198 GO:GO:0010586 GO:GO:0000932
GO:GO:0035278 GO:GO:0004842 GO:GO:0021915 InterPro:IPR013017
PROSITE:PS51125 GO:GO:0010172 InterPro:IPR017907 GO:GO:0051865
GeneTree:ENSGT00550000074377 GO:GO:0072089 InterPro:IPR017868
Pfam:PF00630 GO:GO:0060964 PROSITE:PS50194 GO:GO:2000177 KO:K12035
EMBL:BX511173 EMBL:CABZ01061336 EMBL:CABZ01061337 IPI:IPI00610395
RefSeq:XP_690252.5 UniGene:Dr.75602 ProteinModelPortal:E7FAM5
Ensembl:ENSDART00000113483 GeneID:561754 KEGG:dre:561754
NextBio:20884076 ArrayExpress:E7FAM5 Bgee:E7FAM5 Uniprot:E7FAM5
Length = 824
Score = 472 (171.2 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 109/279 (39%), Positives = 152/279 (54%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLKTNCVFLA---FTWP 100
G G G P GI V + +VVAD SN+RVQ+ P F K + F P
Sbjct: 553 GGEGDGDGQLCRPWGICVDKEGYVVVADRSNNRVQIFKPCGTFHHKFGTLGSRPGQFDRP 612
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
G+A I+VAD NHR+Q+F DG F+ KFG G K GQ +P +AV+ +++V
Sbjct: 613 AGVACDSQRRIIVADKDNHRIQIFTFDGQFLLKFGEKGTKNGQFNYPWDVAVNFEGKILV 672
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
SD+ NHRVQ+F DGTF+ K+G G + P +A + ++V+D NNH
Sbjct: 673 SDTRNHRVQLFG-------PDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVTDFNNH 725
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+ + + + GSEG+ GQ P+GVAVD + I V DS N+RIQ+F P+G FL
Sbjct: 726 RLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQEDRIIVADSRNHRIQVFEPNGNFLC 785
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
FG G+G G+ G+AV +G I+ D N+RI +F
Sbjct: 786 KFGTHGNGFGQMDRPSGIAVTPDGVIVAVDFGNNRILMF 824
Score = 393 (143.4 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 92/234 (39%), Positives = 130/234 (55%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-CFP-HFDLK---TNCVFLAFT 98
K G+ GS PG F P G+A I+VAD NHR+Q+ F F LK F
Sbjct: 598 KFGTLGSRPGQFDRPAGVACDSQRRIIVADKDNHRIQIFTFDGQFLLKFGEKGTKNGQFN 657
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+P +AV + I+V+D+ NHRVQ+F DGTF+ K+G G + P +A + +
Sbjct: 658 YPWDVAVNFEGKILVSDTRNHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHL 717
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+V+D NNHR+ + + QS F+G G+ GN GQ P +AV +R+IV+DS
Sbjct: 718 VVTDFNNHRLLVIRPD---CQS-ARFLGSEGT-GN--GQFLRPQGVAVDQEDRIIVADSR 770
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
NHR+Q+F+ NG + FG+ G+ GQ+ P G+AV G I D GNNRI +F
Sbjct: 771 NHRIQVFEPNGNFLCKFGTHGNGFGQMDRPSGIAVTPDGVIVAVDFGNNRILMF 824
Score = 357 (130.7 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 76/191 (39%), Positives = 113/191 (59%)
Query: 128 GTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGK 187
G + FG G+ GQL P I V V+V+D +N+RVQIF + GTF K
Sbjct: 546 GLPMASFGGEGDGDGQLCRPWGICVDKEGYVVVADRSNNRVQIF-------KPCGTFHHK 598
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG++G++ GQ + P +A + R+IV+D +NHR+QIF +G+ + FG +G++ GQ +
Sbjct: 599 FGTLGSRPGQFDRPAGVACDSQRRIIVADKDNHRIQIFTFDGQFLLKFGEKGTKNGQFNY 658
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P VAV+ +G I V D+ N+R+Q+F PDG FL +G G+ F GVA G+++
Sbjct: 659 PWDVAVNFEGKILVSDTRNHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLV 718
Query: 308 VCDRENHRIQV 318
V D NHR+ V
Sbjct: 719 VTDFNNHRLLV 729
Score = 299 (110.3 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 82/217 (37%), Positives = 113/217 (52%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+ + PD ++ A+ S+H+ DGT+ + G E H ++V N+ I +
Sbjct: 483 VLMSPDGNLSSAEVSDHQ------DGTYTVSYLPKG------EGEHLLSVLICNQHI--E 528
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
+ +V + +GR + G + FG G+ GQL P I V V+V+D +N+RV
Sbjct: 529 GSPFKVMV--KSGRSYGGVGLPMASFGGEGDGDGQLCRPWGICVDKEGYVVVADRSNNRV 586
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAF 282
QIF G FG+ GS GQ P GVA D Q I V D N+RIQIFT DGQFL F
Sbjct: 587 QIFKPCGTFHHKFGTLGSRPGQFDRPAGVACDSQRRIIVADKDNHRIQIFTFDGQFLLKF 646
Query: 283 GCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+ +G+F VAV G ILV D NHR+Q+F
Sbjct: 647 GEKGTKNGQFNYPWDVAVNFEGKILVSDTRNHRVQLF 683
>UNIPROTKB|F1NEW3 [details] [associations]
symbol:TRIM2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0043523 "regulation of neuron
apoptotic process" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 Prosite:PS00518 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296 GO:GO:0004842
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907
GeneTree:ENSGT00550000074377 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 OMA:AGPPCQW EMBL:AADN02016559 EMBL:AADN02016560
IPI:IPI00573431 Ensembl:ENSGALT00000014990 Uniprot:F1NEW3
Length = 755
Score = 438 (159.2 bits), Expect = 1.4e-40, P = 1.4e-40
Identities = 107/284 (37%), Positives = 152/284 (53%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFP--HFDLKTNCVFLA-- 96
L F++G++G G FT +G+A + I++ADS+N VQ+ HF + +
Sbjct: 483 LIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGHFKSRFGIRGRSPG 542
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV P I++AD N V +F SDG F K GS G+L P I+V
Sbjct: 543 QLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKAKIGS-----GKLMGPKGISVDRN 597
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F +FQ +G V +FGS GN Q PH+ AV++ N +IV+
Sbjct: 598 GHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDKQFAGPHFAAVNSNNEIIVT 650
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V++F+ G I FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 651 DFHNHSVKVFNQEGEFILKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGS 710
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL S D + G +G+A+ S+G+++V D NH +V+
Sbjct: 711 GSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFKVY 751
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 33/91 (36%), Positives = 46/91 (50%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC--FPHFDLKTNCVF 94
Q+ K GS G G F P G+AV + +I+VAD N R+QV F N
Sbjct: 662 QEGEFILKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSA 721
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH +V++
Sbjct: 722 DPLYGPQGLALTSDGHVVVADSGNHCFKVYR 752
>ZFIN|ZDB-GENE-050327-99 [details] [associations]
symbol:trim2a "tripartite motif-containing 2a"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 Prosite:PS00518 ZFIN:ZDB-GENE-050327-99
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 eggNOG:COG3391 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 KO:K11997 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 HOGENOM:HOG000220817 HOVERGEN:HBG054843
EMBL:BC091789 IPI:IPI00511957 RefSeq:NP_001014393.1
UniGene:Dr.39320 ProteinModelPortal:Q58ER5 GeneID:100003782
KEGG:dre:100003782 CTD:100003782 InParanoid:Q58ER5 NextBio:20785982
Uniprot:Q58ER5
Length = 744
Score = 433 (157.5 bits), Expect = 4.5e-40, P = 4.5e-40
Identities = 106/284 (37%), Positives = 146/284 (51%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F+IG++G G FT +G+A +++ADS+N VQ+ K
Sbjct: 472 LIFRIGTKGRNKGEFTNLQGVAASSVGKVLIADSNNQCVQIFLNDGQFKGRFGIRGRSPG 531
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV P I++AD N V +F SDG F K GS G+L P ++V
Sbjct: 532 QLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKSKIGS-----GKLMGPKGVSVDRN 586
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F +FQ +G V KFG+ GN Q PH+ AV+ N VIV+
Sbjct: 587 GHIIVVD--NKSCCVF-----IFQPNGKLVSKFGNRGNSDKQFAGPHFAAVNQNNEVIVT 639
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V++F G I FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 640 DFHNHSVKVFSPEGEFILKFGSNGEGNGQFNAPTGVAVDANGNIIVADWGNSRIQVFDSS 699
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL S D + G +G+A+ S+G+++V D NH +V+
Sbjct: 700 GSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFKVY 740
Score = 357 (130.7 bits), Expect = 8.5e-32, P = 8.5e-32
Identities = 86/275 (31%), Positives = 137/275 (49%)
Query: 3 IPSEAKNINSCFLLQTLLVSGIGQVGTTPRSQ-----YLQKRRLQFKIGSRGSEPGCFTW 57
I ++ +N LQ + S +G+V + +L + + + G RG PG
Sbjct: 476 IGTKGRNKGEFTNLQGVAASSVGKVLIADSNNQCVQIFLNDGQFKGRFGIRGRSPGQLQR 535
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSS 117
P G+AV P I++AD N V + K+ P+G++V + I+V D+
Sbjct: 536 PTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKSKIGSGKLMGPKGVSVDRNGHIIVVDNK 595
Query: 118 NHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 177
+ V +FQ +G V KFG+ GN Q PH+ AV+ N VIV+D +NH V +V
Sbjct: 596 SCCVFIFQPNGKLVSKFGNRGNSDKQFAGPHFAAVNQNNEVIVTDFHNHSV-------KV 648
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS 237
F +G F+ KFGS G GQ P +AV +IV+D N R+Q+FD +G ++ +
Sbjct: 649 FSPEGEFILKFGSNGEGNGQFNAPTGVAVDANGNIIVADWGNSRIQVFDSSGSFLSYINT 708
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
L P+G+A+ G++ V DSGN+ +++
Sbjct: 709 SADP---LYGPQGLALTSDGHVVVADSGNHCFKVY 740
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 32/84 (38%), Positives = 44/84 (52%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWPR 101
K GS G G F P G+AV + +I+VAD N R+QV F N P+
Sbjct: 658 KFGSNGEGNGQFNAPTGVAVDANGNIIVADWGNSRIQVFDSSGSFLSYINTSADPLYGPQ 717
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQ 125
G+A+ D +VVADS NH +V++
Sbjct: 718 GLALTSDGHVVVADSGNHCFKVYR 741
>ZFIN|ZDB-GENE-090312-70 [details] [associations]
symbol:trim2b "tripartite motif-containing 2b"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50119
SMART:SM00502 SMART:SM00557 ZFIN:ZDB-GENE-090312-70
Gene3D:2.60.40.10 InterPro:IPR013783 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622 InterPro:IPR014756
SUPFAM:SSF81296 eggNOG:COG3391 InterPro:IPR013017 PROSITE:PS51125
GeneTree:ENSGT00550000074377 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 HOGENOM:HOG000220817 HOVERGEN:HBG054843
EMBL:BX548256 IPI:IPI00494131 Ensembl:ENSDART00000113551
OMA:CENAVCE OrthoDB:EOG4VDPZ4 Uniprot:B8A5M1
Length = 669
Score = 430 (156.4 bits), Expect = 5.2e-40, P = 5.2e-40
Identities = 105/301 (34%), Positives = 160/301 (53%)
Query: 25 GQVGTTPRSQYLQ-KRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCF 83
G + +TP+ + + L F+IG++G G FT +G+A + I++ADS+N VQ+
Sbjct: 380 GSLFSTPKKRVNPIEDDLIFRIGTKGRNKGEFTNLQGVAACSEGRILIADSNNQCVQIFS 439
Query: 84 PHFDLKTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
+ ++ P G+AV P+ I++AD N V +F S+G + K GS
Sbjct: 440 NTGEFQSRFGVRGRSPGQLQRPTGVAVHPNGDIIIADYDNKWVSIFSSEGKYKAKLGS-- 497
Query: 139 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQL 198
G+L P ++V VIV D N +F +FQ G + KFGS GN Q
Sbjct: 498 ---GRLMGPKGVSVDQNGHVIVVD--NKACTVF-----IFQPSGKLITKFGSRGNGDRQF 547
Query: 199 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
PH+ AV+N N +I++D +NH V++F+ +G + FGS G GQ P GVAVD G
Sbjct: 548 AGPHFAAVNNNNEIIITDFHNHSVKVFNADGEFLLKFGSNGEGNGQFNAPTGVAVDVNGN 607
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
I V D GN+RIQ+F G FL + D + G +G+A+ S+G+++V D NH +V
Sbjct: 608 IIVADWGNSRIQVFDGSGSFLSYINT--AADPLY-GPQGLALTSDGHVVVADSGNHCFKV 664
Query: 319 F 319
+
Sbjct: 665 Y 665
Score = 125 (49.1 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 32/84 (38%), Positives = 44/84 (52%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC--FPHFDLKTNCVFLAFTWPR 101
K GS G G F P G+AV + +I+VAD N R+QV F N P+
Sbjct: 583 KFGSNGEGNGQFNAPTGVAVDVNGNIIVADWGNSRIQVFDGSGSFLSYINTAADPLYGPQ 642
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQ 125
G+A+ D +VVADS NH +V++
Sbjct: 643 GLALTSDGHVVVADSGNHCFKVYR 666
>UNIPROTKB|A4IF63 [details] [associations]
symbol:TRIM2 "Tripartite motif-containing protein 2"
species:9913 "Bos taurus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0043523 "regulation of neuron apoptotic
process" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0004842 GO:GO:0043523 eggNOG:COG3391
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907
GeneTree:ENSGT00550000074377 KO:K11997 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 HOGENOM:HOG000220817 EMBL:BC134423
EMBL:AAFC03054408 IPI:IPI00728692 RefSeq:NP_001077204.1
UniGene:Bt.37228 ProteinModelPortal:A4IF63
Ensembl:ENSBTAT00000011609 GeneID:538617 KEGG:bta:538617 CTD:23321
HOVERGEN:HBG054843 InParanoid:A4IF63 OMA:AGPPCQW OrthoDB:EOG46T30V
NextBio:20877476 ArrayExpress:A4IF63 Uniprot:A4IF63
Length = 744
Score = 431 (156.8 bits), Expect = 7.5e-40, P = 7.5e-40
Identities = 104/284 (36%), Positives = 150/284 (52%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++G++G G FT +G+A + I++ADS+N VQ+ K+
Sbjct: 472 LIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPG 531
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV P I++AD N V +F SDG F K GS G+L P ++V
Sbjct: 532 QLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS-----GKLMGPKGVSVDRN 586
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F +FQ +G V +FGS GN Q PH+ AV++ N +IV+
Sbjct: 587 GHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIVT 639
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V++F+ G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 640 DFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGS 699
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL S D + G +G+A+ S+G+++V D NH +V+
Sbjct: 700 GSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFKVY 740
Score = 128 (50.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 33/91 (36%), Positives = 46/91 (50%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC--FPHFDLKTNCVF 94
Q+ K GS G G F P G+AV + +I+VAD N R+QV F N
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSA 710
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH +V++
Sbjct: 711 DPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>UNIPROTKB|Q9C040 [details] [associations]
symbol:TRIM2 "Tripartite motif-containing protein 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=NAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043523
"regulation of neuron apoptotic process" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0004842 GO:GO:0043523 eggNOG:COG3391
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907 KO:K11997
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
HOGENOM:HOG000220817 CTD:23321 HOVERGEN:HBG054843 OrthoDB:EOG46T30V
EMBL:AF220018 EMBL:AB011089 EMBL:BC005016 EMBL:BC011052
EMBL:AL110234 IPI:IPI00153011 PIR:T00082 RefSeq:NP_001123539.1
RefSeq:NP_056086.2 UniGene:Hs.435711 ProteinModelPortal:Q9C040
SMR:Q9C040 IntAct:Q9C040 STRING:Q9C040 PhosphoSite:Q9C040
DMDM:21363034 PaxDb:Q9C040 PeptideAtlas:Q9C040 PRIDE:Q9C040
DNASU:23321 Ensembl:ENST00000437508 GeneID:23321 KEGG:hsa:23321
UCSC:uc003ing.2 GeneCards:GC04P154073 HGNC:HGNC:15974 HPA:HPA035853
HPA:HPA035854 MIM:614141 neXtProt:NX_Q9C040 PharmGKB:PA38070
InParanoid:Q9C040 PhylomeDB:Q9C040 ChiTaRS:TRIM2 GenomeRNAi:23321
NextBio:45216 ArrayExpress:Q9C040 Bgee:Q9C040 CleanEx:HS_TRIM2
Genevestigator:Q9C040 GermOnline:ENSG00000109654 Uniprot:Q9C040
Length = 744
Score = 430 (156.4 bits), Expect = 9.7e-40, P = 9.7e-40
Identities = 103/284 (36%), Positives = 150/284 (52%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++G++G G FT +G+A + I++ADS+N VQ+ K+
Sbjct: 472 LIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPG 531
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV P I++AD N V +F SDG F K GS G+L P ++V
Sbjct: 532 QLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS-----GKLMGPKGVSVDRN 586
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F +FQ +G V +FGS GN Q PH+ AV++ N +I++
Sbjct: 587 GHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIIT 639
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V++F+ G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 640 DFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGS 699
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL S D + G +G+A+ S+G+++V D NH +V+
Sbjct: 700 GSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFKVY 740
Score = 128 (50.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 33/91 (36%), Positives = 46/91 (50%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC--FPHFDLKTNCVF 94
Q+ K GS G G F P G+AV + +I+VAD N R+QV F N
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSA 710
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH +V++
Sbjct: 711 DPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>UNIPROTKB|D2GXS7 [details] [associations]
symbol:TRIM2 "Tripartite motif-containing protein 2"
species:9646 "Ailuropoda melanoleuca" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0043523
"regulation of neuron apoptotic process" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001258
InterPro:IPR001298 InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
SMART:SM00502 SMART:SM00557 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0004842 GO:GO:0043523 InterPro:IPR013017
PROSITE:PS51125 InterPro:IPR017907 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 EMBL:GL192370 ProteinModelPortal:D2GXS7
HOGENOM:HOG000220817 Uniprot:D2GXS7
Length = 744
Score = 430 (156.4 bits), Expect = 9.7e-40, P = 9.7e-40
Identities = 104/284 (36%), Positives = 149/284 (52%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++G++G G FT +G+A I++ADS+N VQ+ K+
Sbjct: 472 LIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPG 531
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV P I++AD N V +F SDG F K GS G+L P ++V
Sbjct: 532 QLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS-----GKLMGPKGVSVDRN 586
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F +FQ +G V +FGS GN Q PH+ AV++ N +IV+
Sbjct: 587 GHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIVT 639
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V++F+ G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 640 DFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGS 699
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL S D + G +G+A+ S+G+++V D NH +V+
Sbjct: 700 GSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFKVY 740
Score = 128 (50.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 33/91 (36%), Positives = 46/91 (50%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC--FPHFDLKTNCVF 94
Q+ K GS G G F P G+AV + +I+VAD N R+QV F N
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSA 710
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH +V++
Sbjct: 711 DPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>WB|WBGene00003026 [details] [associations]
symbol:lin-41 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0040034 "regulation of
development, heterochronic" evidence=IMP] [GO:0045604 "regulation
of epidermal cell differentiation" evidence=IMP] [GO:0007276
"gamete generation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0044268 "multicellular organismal protein metabolic process"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 InterPro:IPR001298 InterPro:IPR003649
Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 SMART:SM00502 SMART:SM00557 Prosite:PS00518
GO:GO:0008340 GO:GO:0002009 GO:GO:0006898 GO:GO:0005737
GO:GO:0006915 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0002119
GO:GO:0046872 GO:GO:0018996 Gene3D:2.120.10.30 InterPro:IPR011042
GO:GO:0008270 GO:GO:0010171 GO:GO:0040011 GO:GO:0040018
GO:GO:0044268 InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0040034
GO:GO:0004842 eggNOG:COG3391 InterPro:IPR013017 PROSITE:PS51125
GO:GO:0045138 GO:GO:0040027 GO:GO:0042787
GeneTree:ENSGT00550000074377 GO:GO:0007276 InterPro:IPR017868
Pfam:PF00630 GO:GO:0009957 PROSITE:PS50194 GO:GO:0045604
EMBL:AF195610 EMBL:AF195611 EMBL:Z81467 RefSeq:NP_001020998.1
RefSeq:NP_001020999.1 UniGene:Cel.5222 HSSP:Q8MQJ9
ProteinModelPortal:Q9U489 SMR:Q9U489 IntAct:Q9U489
MINT:MINT-6669161 STRING:Q9U489 PaxDb:Q9U489 PRIDE:Q9U489
EnsemblMetazoa:C12C8.3a.1 EnsemblMetazoa:C12C8.3a.2 GeneID:172760
KEGG:cel:CELE_C12C8.3 UCSC:C12C8.3b CTD:172760 WormBase:C12C8.3a
WormBase:C12C8.3b HOGENOM:HOG000022179 InParanoid:Q9U489 KO:K12035
OMA:ESGPCAK NextBio:876903 Uniprot:Q9U489
Length = 1147
Score = 425 (154.7 bits), Expect = 1.0e-39, Sum P(2) = 1.0e-39
Identities = 86/222 (38%), Positives = 128/222 (57%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GI V ++VAD SN+RVQ+F DG F+ KFG+ GN+ GQ + P I ++ N ++
Sbjct: 848 PWGICVDQRGRVIVADRSNNRVQIFDKDGNFISKFGTSGNRPGQFDRPAGITTNSLNNIV 907
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHRVQ+FD NG F+ KFG G G +P +A ++ N + VSD+ N
Sbjct: 908 VADKDNHRVQVFDENGM-------FLLKFGDRGRAVGYFNYPWGVATNSHNAIAVSDTRN 960
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQ-LKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
HRVQIF G+ + G + + + L PRG+ G + + D N+R+ + +P
Sbjct: 961 HRVQIFTPQGQFVRKCGFDSAYFFKNLDSPRGLCYLPDGQLLITDFNNHRLAVLSPRNMS 1020
Query: 279 -LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++ +G G GDG F +GV + G+ILVCD N+R+QVF
Sbjct: 1021 EMKVYGSEGDGDGMFVRPQGVVIDPEGHILVCDSRNNRVQVF 1062
Score = 372 (136.0 bits), Expect = 5.4e-33, P = 5.4e-33
Identities = 78/188 (41%), Positives = 109/188 (57%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G+ G+L P I V RVIV+D +N+RVQIFD DG F+ KFG+ GN
Sbjct: 835 FGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIFD-------KDGNFISKFGTSGN 887
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
+ GQ + P I ++ N ++V+D +NHRVQ+FD NG + FG G G +P GVA
Sbjct: 888 RPGQFDRPAGITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGYFNYPWGVAT 947
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE---GVAVMSNGNILVCD 310
+ I+V D+ N+R+QIFTP GQF+R C FK L+ G+ + +G +L+ D
Sbjct: 948 NSHNAIAVSDTRNHRVQIFTPQGQFVRK--CGFDSAYFFKNLDSPRGLCYLPDGQLLITD 1005
Query: 311 RENHRIQV 318
NHR+ V
Sbjct: 1006 FNNHRLAV 1013
Score = 360 (131.8 bits), Expect = 8.8e-33, Sum P(2) = 8.8e-33
Identities = 90/249 (36%), Positives = 127/249 (51%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------A 96
G GS G P GI V ++VAD SN+RVQ+ FD N +
Sbjct: 836 GKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQI----FDKDGNFISKFGTSGNRPGQ 891
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P GI N+IVVAD NHRVQVF +G F+ KFG G G +P +A ++ N
Sbjct: 892 FDRPAGITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGYFNYPWGVATNSHN 951
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ VSD+ NHRVQIF G+ + G F L+ P + +++++D
Sbjct: 952 AIAVSDTRNHRVQIFTPQGQFVRKCGFDSAYFFK------NLDSPRGLCYLPDGQLLITD 1005
Query: 217 SNNHRVQIFDV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
NNHR+ + N + +GSEG +G P+GV +D +G+I V DS NNR+Q+F D
Sbjct: 1006 FNNHRLAVLSPRNMSEMKVYGSEGDGDGMFVRPQGVVIDPEGHILVCDSRNNRVQVFASD 1065
Query: 276 G-QFLRAFG 283
+F+ +FG
Sbjct: 1066 DMRFIGSFG 1074
Score = 261 (96.9 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 56/132 (42%), Positives = 74/132 (56%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG G+ G+L P I V RVIV+D +N+RVQIFD +G I+ FG+ G+ GQ
Sbjct: 835 FGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIFDKDGNFISKFGTSGNRPGQFDR 894
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+ + I V D N+R+Q+F +G FL FG G G F GVA S+ I
Sbjct: 895 PAGITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGYFNYPWGVATNSHNAIA 954
Query: 308 VCDRENHRIQVF 319
V D NHR+Q+F
Sbjct: 955 VSDTRNHRVQIF 966
Score = 260 (96.6 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 70/200 (35%), Positives = 100/200 (50%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH--FDLKTNCVFLA---FT 98
K G+ G+ PG F P GI N+IVVAD NHRVQV + F LK A F
Sbjct: 881 KFGTSGNRPGQFDRPAGITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGYFN 940
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG-SMGNKAGQLEHPHYIAVSNTNR 157
+P G+A N+I V+D+ NHRVQ+F G FV K G L+ P + +
Sbjct: 941 YPWGVATNSHNAIAVSDTRNHRVQIFTPQGQFVRKCGFDSAYFFKNLDSPRGLCYLPDGQ 1000
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++++D NNHR+ + S+ + +GS G+ G P + + ++V DS
Sbjct: 1001 LLITDFNNHRLAVLSPRN---MSE---MKVYGSEGDGDGMFVRPQGVVIDPEGHILVCDS 1054
Query: 218 NNHRVQIFDVNG-RVITSFG 236
N+RVQ+F + R I SFG
Sbjct: 1055 RNNRVQVFASDDMRFIGSFG 1074
Score = 216 (81.1 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 42/91 (46%), Positives = 58/91 (63%)
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G ++T FG EGS +G+L P G+ VD +G + V D NNR+QIF DG F+ FG G+
Sbjct: 830 GPILT-FGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIFDKDGNFISKFGTSGNR 888
Query: 289 DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F G+ S NI+V D++NHR+QVF
Sbjct: 889 PGQFDRPAGITTNSLNNIVVADKDNHRVQVF 919
Score = 52 (23.4 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIF 272
P +AV G I V D GNN I++F
Sbjct: 1123 PTDLAVGPDGRIYVVDFGNNCIRVF 1147
Score = 38 (18.4 bits), Expect = 1.0e-39, Sum P(2) = 1.0e-39
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 298 VAVMSNGNILVCDRENHRIQVF 319
+AV +G I V D N+ I+VF
Sbjct: 1126 LAVGPDGRIYVVDFGNNCIRVF 1147
>UNIPROTKB|Q9U489 [details] [associations]
symbol:lin-41 "Protein lin-41" species:6239 "Caenorhabditis
elegans" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0009957 "epidermal cell fate specification"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 InterPro:IPR001298 InterPro:IPR003649
Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 SMART:SM00502 SMART:SM00557 Prosite:PS00518
GO:GO:0008340 GO:GO:0002009 GO:GO:0006898 GO:GO:0005737
GO:GO:0006915 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0002119
GO:GO:0046872 GO:GO:0018996 Gene3D:2.120.10.30 InterPro:IPR011042
GO:GO:0008270 GO:GO:0010171 GO:GO:0040011 GO:GO:0040018
GO:GO:0044268 InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0040034
GO:GO:0004842 eggNOG:COG3391 InterPro:IPR013017 PROSITE:PS51125
GO:GO:0045138 GO:GO:0040027 GO:GO:0042787
GeneTree:ENSGT00550000074377 GO:GO:0007276 InterPro:IPR017868
Pfam:PF00630 GO:GO:0009957 PROSITE:PS50194 GO:GO:0045604
EMBL:AF195610 EMBL:AF195611 EMBL:Z81467 RefSeq:NP_001020998.1
RefSeq:NP_001020999.1 UniGene:Cel.5222 HSSP:Q8MQJ9
ProteinModelPortal:Q9U489 SMR:Q9U489 IntAct:Q9U489
MINT:MINT-6669161 STRING:Q9U489 PaxDb:Q9U489 PRIDE:Q9U489
EnsemblMetazoa:C12C8.3a.1 EnsemblMetazoa:C12C8.3a.2 GeneID:172760
KEGG:cel:CELE_C12C8.3 UCSC:C12C8.3b CTD:172760 WormBase:C12C8.3a
WormBase:C12C8.3b HOGENOM:HOG000022179 InParanoid:Q9U489 KO:K12035
OMA:ESGPCAK NextBio:876903 Uniprot:Q9U489
Length = 1147
Score = 425 (154.7 bits), Expect = 1.0e-39, Sum P(2) = 1.0e-39
Identities = 86/222 (38%), Positives = 128/222 (57%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GI V ++VAD SN+RVQ+F DG F+ KFG+ GN+ GQ + P I ++ N ++
Sbjct: 848 PWGICVDQRGRVIVADRSNNRVQIFDKDGNFISKFGTSGNRPGQFDRPAGITTNSLNNIV 907
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NHRVQ+FD NG F+ KFG G G +P +A ++ N + VSD+ N
Sbjct: 908 VADKDNHRVQVFDENGM-------FLLKFGDRGRAVGYFNYPWGVATNSHNAIAVSDTRN 960
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQ-LKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
HRVQIF G+ + G + + + L PRG+ G + + D N+R+ + +P
Sbjct: 961 HRVQIFTPQGQFVRKCGFDSAYFFKNLDSPRGLCYLPDGQLLITDFNNHRLAVLSPRNMS 1020
Query: 279 -LRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++ +G G GDG F +GV + G+ILVCD N+R+QVF
Sbjct: 1021 EMKVYGSEGDGDGMFVRPQGVVIDPEGHILVCDSRNNRVQVF 1062
Score = 372 (136.0 bits), Expect = 5.4e-33, P = 5.4e-33
Identities = 78/188 (41%), Positives = 109/188 (57%)
Query: 134 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
FG G+ G+L P I V RVIV+D +N+RVQIFD DG F+ KFG+ GN
Sbjct: 835 FGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIFD-------KDGNFISKFGTSGN 887
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
+ GQ + P I ++ N ++V+D +NHRVQ+FD NG + FG G G +P GVA
Sbjct: 888 RPGQFDRPAGITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGYFNYPWGVAT 947
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLE---GVAVMSNGNILVCD 310
+ I+V D+ N+R+QIFTP GQF+R C FK L+ G+ + +G +L+ D
Sbjct: 948 NSHNAIAVSDTRNHRVQIFTPQGQFVRK--CGFDSAYFFKNLDSPRGLCYLPDGQLLITD 1005
Query: 311 RENHRIQV 318
NHR+ V
Sbjct: 1006 FNNHRLAV 1013
Score = 360 (131.8 bits), Expect = 8.8e-33, Sum P(2) = 8.8e-33
Identities = 90/249 (36%), Positives = 127/249 (51%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------A 96
G GS G P GI V ++VAD SN+RVQ+ FD N +
Sbjct: 836 GKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQI----FDKDGNFISKFGTSGNRPGQ 891
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P GI N+IVVAD NHRVQVF +G F+ KFG G G +P +A ++ N
Sbjct: 892 FDRPAGITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGYFNYPWGVATNSHN 951
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+ VSD+ NHRVQIF G+ + G F L+ P + +++++D
Sbjct: 952 AIAVSDTRNHRVQIFTPQGQFVRKCGFDSAYFFK------NLDSPRGLCYLPDGQLLITD 1005
Query: 217 SNNHRVQIFDV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
NNHR+ + N + +GSEG +G P+GV +D +G+I V DS NNR+Q+F D
Sbjct: 1006 FNNHRLAVLSPRNMSEMKVYGSEGDGDGMFVRPQGVVIDPEGHILVCDSRNNRVQVFASD 1065
Query: 276 G-QFLRAFG 283
+F+ +FG
Sbjct: 1066 DMRFIGSFG 1074
Score = 261 (96.9 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 56/132 (42%), Positives = 74/132 (56%)
Query: 188 FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF 247
FG G+ G+L P I V RVIV+D +N+RVQIFD +G I+ FG+ G+ GQ
Sbjct: 835 FGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIFDKDGNFISKFGTSGNRPGQFDR 894
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL 307
P G+ + I V D N+R+Q+F +G FL FG G G F GVA S+ I
Sbjct: 895 PAGITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGYFNYPWGVATNSHNAIA 954
Query: 308 VCDRENHRIQVF 319
V D NHR+Q+F
Sbjct: 955 VSDTRNHRVQIF 966
Score = 260 (96.6 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 70/200 (35%), Positives = 100/200 (50%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH--FDLKTNCVFLA---FT 98
K G+ G+ PG F P GI N+IVVAD NHRVQV + F LK A F
Sbjct: 881 KFGTSGNRPGQFDRPAGITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGYFN 940
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG-SMGNKAGQLEHPHYIAVSNTNR 157
+P G+A N+I V+D+ NHRVQ+F G FV K G L+ P + +
Sbjct: 941 YPWGVATNSHNAIAVSDTRNHRVQIFTPQGQFVRKCGFDSAYFFKNLDSPRGLCYLPDGQ 1000
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
++++D NNHR+ + S+ + +GS G+ G P + + ++V DS
Sbjct: 1001 LLITDFNNHRLAVLSPRN---MSE---MKVYGSEGDGDGMFVRPQGVVIDPEGHILVCDS 1054
Query: 218 NNHRVQIFDVNG-RVITSFG 236
N+RVQ+F + R I SFG
Sbjct: 1055 RNNRVQVFASDDMRFIGSFG 1074
Score = 216 (81.1 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 42/91 (46%), Positives = 58/91 (63%)
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSG 288
G ++T FG EGS +G+L P G+ VD +G + V D NNR+QIF DG F+ FG G+
Sbjct: 830 GPILT-FGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIFDKDGNFISKFGTSGNR 888
Query: 289 DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+F G+ S NI+V D++NHR+QVF
Sbjct: 889 PGQFDRPAGITTNSLNNIVVADKDNHRVQVF 919
Score = 52 (23.4 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 248 PRGVAVDDQGYISVGDSGNNRIQIF 272
P +AV G I V D GNN I++F
Sbjct: 1123 PTDLAVGPDGRIYVVDFGNNCIRVF 1147
Score = 38 (18.4 bits), Expect = 1.0e-39, Sum P(2) = 1.0e-39
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 298 VAVMSNGNILVCDRENHRIQVF 319
+AV +G I V D N+ I+VF
Sbjct: 1126 LAVGPDGRIYVVDFGNNCIRVF 1147
>UNIPROTKB|I3L8U3 [details] [associations]
symbol:TRIM2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 InterPro:IPR001298 InterPro:IPR003649
Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 SMART:SM00502 SMART:SM00557
Prosite:PS00518 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GeneTree:ENSGT00550000074377 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 OMA:AGPPCQW EMBL:FP236133
EMBL:CU467574 Ensembl:ENSSSCT00000026657 Uniprot:I3L8U3
Length = 761
Score = 430 (156.4 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 104/284 (36%), Positives = 149/284 (52%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++G++G G FT +G+A I++ADS+N VQ+ K+
Sbjct: 489 LIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPG 548
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV P I++AD N V +F SDG F K GS G+L P ++V
Sbjct: 549 QLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS-----GKLMGPKGVSVDRN 603
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F +FQ +G V +FGS GN Q PH+ AV++ N +IV+
Sbjct: 604 GHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIVT 656
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V++F+ G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 657 DFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGS 716
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL S D + G +G+A+ S+G+++V D NH +V+
Sbjct: 717 GSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFKVY 757
Score = 128 (50.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 33/91 (36%), Positives = 46/91 (50%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC--FPHFDLKTNCVF 94
Q+ K GS G G F P G+AV + +I+VAD N R+QV F N
Sbjct: 668 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSA 727
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH +V++
Sbjct: 728 DPLYGPQGLALTSDGHVVVADSGNHCFKVYR 758
>UNIPROTKB|D3DP09 [details] [associations]
symbol:TRIM2 "Tripartite motif-containing protein 2"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001258
InterPro:IPR001298 InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
SMART:SM00502 SMART:SM00557 Prosite:PS00518 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622 EMBL:CH471056
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0004842 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 KO:K11997 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 HOGENOM:HOG000220817 CTD:23321 OMA:AGPPCQW
RefSeq:NP_056086.2 UniGene:Hs.435711 DNASU:23321 GeneID:23321
KEGG:hsa:23321 HGNC:HGNC:15974 ChiTaRS:TRIM2 GenomeRNAi:23321
NextBio:45216 EMBL:AC013477 EMBL:AC114791 IPI:IPI00910066
ProteinModelPortal:D3DP09 SMR:D3DP09 Ensembl:ENST00000338700
UCSC:uc003inh.2 ArrayExpress:D3DP09 Bgee:D3DP09 Uniprot:D3DP09
Length = 771
Score = 430 (156.4 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 103/284 (36%), Positives = 150/284 (52%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++G++G G FT +G+A + I++ADS+N VQ+ K+
Sbjct: 499 LIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPG 558
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV P I++AD N V +F SDG F K GS G+L P ++V
Sbjct: 559 QLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS-----GKLMGPKGVSVDRN 613
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F +FQ +G V +FGS GN Q PH+ AV++ N +I++
Sbjct: 614 GHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIIT 666
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V++F+ G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 667 DFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGS 726
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL S D + G +G+A+ S+G+++V D NH +V+
Sbjct: 727 GSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFKVY 767
Score = 128 (50.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 33/91 (36%), Positives = 46/91 (50%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC--FPHFDLKTNCVF 94
Q+ K GS G G F P G+AV + +I+VAD N R+QV F N
Sbjct: 678 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSA 737
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH +V++
Sbjct: 738 DPLYGPQGLALTSDGHVVVADSGNHCFKVYR 768
>UNIPROTKB|F7H9X2 [details] [associations]
symbol:TRIM2 "Tripartite motif-containing protein 2"
species:9483 "Callithrix jacchus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0043523 "regulation of neuron
apoptotic process" evidence=ISS] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0004842 GO:GO:0043523 InterPro:IPR013017
PROSITE:PS51125 InterPro:IPR017907 GeneTree:ENSGT00550000074377
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 CTD:23321
OMA:AGPPCQW EMBL:ACFV01002178 EMBL:ACFV01002179 EMBL:ACFV01002180
EMBL:ACFV01002181 EMBL:ACFV01002182 EMBL:ACFV01002183
EMBL:ACFV01002184 EMBL:ACFV01002185 EMBL:ACFV01002186
EMBL:ACFV01002187 EMBL:ACFV01002188 EMBL:ACFV01002189
EMBL:ACFV01002190 EMBL:ACFV01002191 EMBL:ACFV01002192
EMBL:ACFV01002193 EMBL:ACFV01002194 EMBL:ACFV01002195
EMBL:ACFV01002196 RefSeq:XP_002745432.1 ProteinModelPortal:F7H9X2
Ensembl:ENSCJAT00000003816 GeneID:100408235 Uniprot:F7H9X2
Length = 744
Score = 429 (156.1 bits), Expect = 1.2e-39, P = 1.2e-39
Identities = 103/284 (36%), Positives = 149/284 (52%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++G++G G FT +G+A I++ADS+N VQ+ K+
Sbjct: 472 LIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPG 531
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV P I++AD N V +F SDG F K GS G+L P ++V
Sbjct: 532 QLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS-----GKLMGPKGVSVDRN 586
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F +FQ +G V +FGS GN Q PH+ AV++ N +I++
Sbjct: 587 GHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIIT 639
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V++F+ G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 640 DFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGS 699
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL S D + G +G+A+ S+G+++V D NH +V+
Sbjct: 700 GSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFKVY 740
Score = 128 (50.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 33/91 (36%), Positives = 46/91 (50%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC--FPHFDLKTNCVF 94
Q+ K GS G G F P G+AV + +I+VAD N R+QV F N
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSA 710
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH +V++
Sbjct: 711 DPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>RGD|1310981 [details] [associations]
symbol:Trim2 "tripartite motif-containing 2" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0043523 "regulation of neuron apoptotic process"
evidence=ISO;ISS;IMP] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 InterPro:IPR001298 InterPro:IPR003649
Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 SMART:SM00502 SMART:SM00557
UniPathway:UPA00143 RGD:1310981 Prosite:PS00518 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0004842 GO:GO:0043523 InterPro:IPR013017
PROSITE:PS51125 InterPro:IPR017907 KO:K11997 InterPro:IPR017868
Pfam:PF00630 EMBL:CH473976 PROSITE:PS50194 CTD:23321
OrthoDB:EOG46T30V IPI:IPI00763055 RefSeq:NP_001102022.1
UniGene:Rn.16973 PRIDE:D3ZQG6 Ensembl:ENSRNOT00000013935
GeneID:361970 KEGG:rno:361970 UCSC:RGD:1310981 NextBio:678221
ArrayExpress:D3ZQG6 Uniprot:D3ZQG6
Length = 744
Score = 427 (155.4 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 102/284 (35%), Positives = 150/284 (52%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++G++G G FT +G+A I++ADS+N VQ+ K+
Sbjct: 472 LIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPG 531
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV P I++AD N V +F +DG F K GS G+L P ++V
Sbjct: 532 QLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGS-----GKLMGPKGVSVDRN 586
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F +FQ +G V +FGS GN Q PH+ AV+++N +I++
Sbjct: 587 GHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSSNEIIIT 639
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V++F+ G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 640 DFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGS 699
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL S D + G +G+A+ S+G+++V D NH +V+
Sbjct: 700 GSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFKVY 740
Score = 128 (50.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 33/91 (36%), Positives = 46/91 (50%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC--FPHFDLKTNCVF 94
Q+ K GS G G F P G+AV + +I+VAD N R+QV F N
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSA 710
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH +V++
Sbjct: 711 DPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>MGI|MGI:1933163 [details] [associations]
symbol:Trim2 "tripartite motif-containing 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;NAS] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=NAS] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0017022 "myosin binding" evidence=NAS]
[GO:0043523 "regulation of neuron apoptotic process"
evidence=ISO;IMP] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001258
InterPro:IPR001298 InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
SMART:SM00502 SMART:SM00557 UniPathway:UPA00143 MGI:MGI:1933163
Prosite:PS00518 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
GO:GO:0017022 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 GO:GO:0004842 GO:GO:0043523
eggNOG:COG3391 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GeneTree:ENSGT00550000074377 KO:K11997
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 CleanEx:MM_NARF
HOGENOM:HOG000220817 CTD:23321 HOVERGEN:HBG054843 OrthoDB:EOG46T30V
ChiTaRS:TRIM2 EMBL:AB043550 EMBL:AF220017 EMBL:AK042752
EMBL:AK045410 EMBL:AK079415 EMBL:AK147275 EMBL:AK220343
EMBL:BC058961 IPI:IPI00113430 RefSeq:NP_001258655.1
RefSeq:NP_001258656.1 RefSeq:NP_001258657.1 RefSeq:NP_109631.2
UniGene:Mm.44876 UniGene:Mm.487650 ProteinModelPortal:Q9ESN6
SMR:Q9ESN6 DIP:DIP-46254N STRING:Q9ESN6 PhosphoSite:Q9ESN6
PaxDb:Q9ESN6 PRIDE:Q9ESN6 Ensembl:ENSMUST00000065380
Ensembl:ENSMUST00000107691 Ensembl:ENSMUST00000107692
Ensembl:ENSMUST00000107693 GeneID:80890 KEGG:mmu:80890
InParanoid:Q5DU27 NextBio:350219 Bgee:Q9ESN6 CleanEx:MM_TRIM2
Genevestigator:Q9ESN6 GermOnline:ENSMUSG00000027993 Uniprot:Q9ESN6
Length = 744
Score = 426 (155.0 bits), Expect = 2.6e-39, P = 2.6e-39
Identities = 102/284 (35%), Positives = 149/284 (52%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++G++G G FT +G+A I++ADS+N VQ+ K+
Sbjct: 472 LIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPG 531
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV P I++AD N V +F +DG F K GS G+L P ++V
Sbjct: 532 QLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGS-----GKLMGPKGVSVDRN 586
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F +FQ +G V +FGS GN Q PH+ AV++ N +I++
Sbjct: 587 GHIIVVD--NKACCVF-----IFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIIT 639
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V++F+ G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 640 DFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGS 699
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL S D + G +G+A+ S+G+++V D NH +V+
Sbjct: 700 GSFLSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFKVY 740
Score = 128 (50.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 33/91 (36%), Positives = 46/91 (50%)
Query: 37 QKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC--FPHFDLKTNCVF 94
Q+ K GS G G F P G+AV + +I+VAD N R+QV F N
Sbjct: 651 QEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSA 710
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQ 125
P+G+A+ D +VVADS NH +V++
Sbjct: 711 DPLYGPQGLALTSDGHVVVADSGNHCFKVYR 741
>UNIPROTKB|F5GX85 [details] [associations]
symbol:TRIM3 "Tripartite motif-containing protein 3"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001258
InterPro:IPR001298 InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
SMART:SM00502 SMART:SM00557 Prosite:PS00518 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR013017 PROSITE:PS51125 EMBL:AC084337 InterPro:IPR017907
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 IPI:IPI00985414
HGNC:HGNC:10064 ProteinModelPortal:F5GX85 SMR:F5GX85
Ensembl:ENST00000537602 ArrayExpress:F5GX85 Bgee:F5GX85
Uniprot:F5GX85
Length = 666
Score = 417 (151.9 bits), Expect = 1.4e-38, P = 1.4e-38
Identities = 102/284 (35%), Positives = 145/284 (51%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 394 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 453
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 454 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 508
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 509 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 561
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 562 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 621
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL S + + G +G+A+ S+G+++V D NH + +
Sbjct: 622 GSFLSYINT--SAEPLY-GPQGLALTSDGHVVVADAGNHCFKAY 662
Score = 362 (132.5 bits), Expect = 1.7e-32, P = 1.7e-32
Identities = 80/228 (35%), Positives = 124/228 (54%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 440 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 499
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 500 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 559
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 560 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 612
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
R+Q+FD +G + S+ + +E L P+G+A+ G++ V D+GN+
Sbjct: 613 SRIQVFDSSGSFL-SYINTSAEP--LYGPQGLALTSDGHVVVADAGNH 657
Score = 162 (62.1 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 390 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 449
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 450 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 482
Score = 125 (49.1 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 31/85 (36%), Positives = 44/85 (51%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWP 100
FK GS G G F P G+AV + +I+VAD N R+QV F N P
Sbjct: 579 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGP 638
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
+G+A+ D +VVAD+ NH + ++
Sbjct: 639 QGLALTSDGHVVVADAGNHCFKAYR 663
>UNIPROTKB|F1RMN8 [details] [associations]
symbol:TRIM3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001258
InterPro:IPR001298 InterPro:IPR003649 Pfam:PF01436 PROSITE:PS50089
SMART:SM00184 SMART:SM00502 SMART:SM00557 Prosite:PS00518
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GeneTree:ENSGT00550000074377 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 OMA:CESCLQN EMBL:CU972372
Ensembl:ENSSSCT00000015976 Uniprot:F1RMN8
Length = 742
Score = 417 (151.9 bits), Expect = 2.5e-38, P = 2.5e-38
Identities = 102/284 (35%), Positives = 145/284 (51%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 470 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 529
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 530 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 584
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 585 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 637
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 638 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 697
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL S + + G +G+A+ S+G+++V D NH + +
Sbjct: 698 GSFLSYINT--SAEPLY-GPQGLALTSDGHVVVADAGNHCFKAY 738
Score = 362 (132.5 bits), Expect = 2.4e-32, P = 2.4e-32
Identities = 80/228 (35%), Positives = 124/228 (54%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 516 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 575
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 576 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 635
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 636 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 688
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
R+Q+FD +G + S+ + +E L P+G+A+ G++ V D+GN+
Sbjct: 689 SRIQVFDSSGSFL-SYINTSAEP--LYGPQGLALTSDGHVVVADAGNH 733
Score = 162 (62.1 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 466 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 525
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 526 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 558
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 31/85 (36%), Positives = 44/85 (51%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWP 100
FK GS G G F P G+AV + +I+VAD N R+QV F N P
Sbjct: 655 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGP 714
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
+G+A+ D +VVAD+ NH + ++
Sbjct: 715 QGLALTSDGHVVVADAGNHCFKAYR 739
>UNIPROTKB|A7MB36 [details] [associations]
symbol:TRIM3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 InterPro:IPR001298 InterPro:IPR003649
Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 SMART:SM00502 SMART:SM00557
Prosite:PS00518 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 eggNOG:COG3391 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GeneTree:ENSGT00550000074377 KO:K11997
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
HOGENOM:HOG000220817 HOVERGEN:HBG054843 OrthoDB:EOG46T30V CTD:10612
OMA:CESCLQN EMBL:DAAA02040854 EMBL:BC151315 IPI:IPI00710951
RefSeq:NP_001094627.1 UniGene:Bt.45458 Ensembl:ENSBTAT00000004636
GeneID:534510 KEGG:bta:534510 InParanoid:A7MB36 NextBio:20876427
Uniprot:A7MB36
Length = 744
Score = 417 (151.9 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 102/284 (35%), Positives = 145/284 (51%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 531
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 532 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 586
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 587 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 639
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 640 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 699
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL S + + G +G+A+ S+G+++V D NH + +
Sbjct: 700 GSFLSYINT--SAEPLY-GPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 362 (132.5 bits), Expect = 2.4e-32, P = 2.4e-32
Identities = 80/228 (35%), Positives = 124/228 (54%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
R+Q+FD +G + S+ + +E L P+G+A+ G++ V D+GN+
Sbjct: 691 SRIQVFDSSGSFL-SYINTSAEP--LYGPQGLALTSDGHVVVADAGNH 735
Score = 162 (62.1 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 31/85 (36%), Positives = 44/85 (51%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWP 100
FK GS G G F P G+AV + +I+VAD N R+QV F N P
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGP 716
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
+G+A+ D +VVAD+ NH + ++
Sbjct: 717 QGLALTSDGHVVVADAGNHCFKAYR 741
>UNIPROTKB|E2QVW6 [details] [associations]
symbol:TRIM3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 Prosite:PS00518 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907
GeneTree:ENSGT00550000074377 KO:K11997 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 CTD:10612 OMA:CESCLQN
EMBL:AAEX03012863 EMBL:AAEX03012864 RefSeq:XP_534038.2
Ensembl:ENSCAFT00000010416 GeneID:476834 KEGG:cfa:476834
NextBio:20852433 Uniprot:E2QVW6
Length = 744
Score = 417 (151.9 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 102/284 (35%), Positives = 145/284 (51%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 531
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 532 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 586
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 587 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 639
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 640 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 699
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL S + + G +G+A+ S+G+++V D NH + +
Sbjct: 700 GSFLSYINT--SAEPLY-GPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 362 (132.5 bits), Expect = 2.4e-32, P = 2.4e-32
Identities = 80/228 (35%), Positives = 124/228 (54%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
R+Q+FD +G + S+ + +E L P+G+A+ G++ V D+GN+
Sbjct: 691 SRIQVFDSSGSFL-SYINTSAEP--LYGPQGLALTSDGHVVVADAGNH 735
Score = 162 (62.1 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 31/85 (36%), Positives = 44/85 (51%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWP 100
FK GS G G F P G+AV + +I+VAD N R+QV F N P
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGP 716
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
+G+A+ D +VVAD+ NH + ++
Sbjct: 717 QGLALTSDGHVVVADAGNHCFKAYR 741
>UNIPROTKB|O75382 [details] [associations]
symbol:TRIM3 "Tripartite motif-containing protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0008022
"protein C-terminus binding" evidence=TAS] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 Prosite:PS00518 GO:GO:0005737 GO:GO:0007399
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:CH471064 GO:GO:0046872
GO:GO:0015031 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0008022 GO:GO:0005769 eggNOG:COG3391
InterPro:IPR013017 PROSITE:PS51125 EMBL:AC084337 InterPro:IPR017907
KO:K11997 InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
HOGENOM:HOG000220817 HOVERGEN:HBG054843 OrthoDB:EOG46T30V
EMBL:AF045239 EMBL:AF220020 EMBL:AF220021 EMBL:AF220022
EMBL:AK291396 EMBL:AK298843 EMBL:BC096827 IPI:IPI00152001
IPI:IPI00216078 IPI:IPI00985414 IPI:IPI01014134
RefSeq:NP_001234935.1 RefSeq:NP_001234936.1 RefSeq:NP_006449.2
RefSeq:NP_150594.2 UniGene:Hs.591992 ProteinModelPortal:O75382
SMR:O75382 IntAct:O75382 STRING:O75382 PhosphoSite:O75382
PRIDE:O75382 Ensembl:ENST00000345851 Ensembl:ENST00000359518
Ensembl:ENST00000525074 Ensembl:ENST00000536344 GeneID:10612
KEGG:hsa:10612 UCSC:uc001mdh.3 CTD:10612 GeneCards:GC11M006469
HGNC:HGNC:10064 MIM:605493 neXtProt:NX_O75382 PharmGKB:PA35534
InParanoid:O75382 OMA:CESCLQN PhylomeDB:O75382 GenomeRNAi:10612
NextBio:40314 ArrayExpress:O75382 Bgee:O75382 CleanEx:HS_TRIM3
Genevestigator:O75382 GermOnline:ENSG00000110171 Uniprot:O75382
Length = 744
Score = 417 (151.9 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 102/284 (35%), Positives = 145/284 (51%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 531
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 532 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 586
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 587 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 639
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 640 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 699
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL S + + G +G+A+ S+G+++V D NH + +
Sbjct: 700 GSFLSYINT--SAEPLY-GPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 362 (132.5 bits), Expect = 2.4e-32, P = 2.4e-32
Identities = 80/228 (35%), Positives = 124/228 (54%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
R+Q+FD +G + S+ + +E L P+G+A+ G++ V D+GN+
Sbjct: 691 SRIQVFDSSGSFL-SYINTSAEP--LYGPQGLALTSDGHVVVADAGNH 735
Score = 162 (62.1 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 31/85 (36%), Positives = 44/85 (51%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWP 100
FK GS G G F P G+AV + +I+VAD N R+QV F N P
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGP 716
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
+G+A+ D +VVAD+ NH + ++
Sbjct: 717 QGLALTSDGHVVVADAGNHCFKAYR 741
>MGI|MGI:1860040 [details] [associations]
symbol:Trim3 "tripartite motif-containing 3" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005768 "endosome" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 MGI:MGI:1860040 Prosite:PS00518 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0015031
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0005769 eggNOG:COG3391 InterPro:IPR013017
PROSITE:PS51125 InterPro:IPR017907 GeneTree:ENSGT00550000074377
KO:K11997 InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
HOGENOM:HOG000220817 HOVERGEN:HBG054843 OrthoDB:EOG46T30V CTD:10612
OMA:CESCLQN EMBL:AB030912 EMBL:AF220019 EMBL:AK019165 EMBL:AK144674
EMBL:BC034263 IPI:IPI00129020 RefSeq:NP_061368.1 UniGene:Mm.29290
ProteinModelPortal:Q9R1R2 SMR:Q9R1R2 IntAct:Q9R1R2 STRING:Q9R1R2
PhosphoSite:Q9R1R2 PaxDb:Q9R1R2 PRIDE:Q9R1R2
Ensembl:ENSMUST00000057525 Ensembl:ENSMUST00000106789 GeneID:55992
KEGG:mmu:55992 UCSC:uc009iym.1 InParanoid:Q9R1R2 ChiTaRS:TRIM3
NextBio:311722 Bgee:Q9R1R2 CleanEx:MM_TRIM3 Genevestigator:Q9R1R2
GermOnline:ENSMUSG00000036989 Uniprot:Q9R1R2
Length = 744
Score = 417 (151.9 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 102/284 (35%), Positives = 145/284 (51%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 531
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 532 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 586
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 587 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 639
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 640 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 699
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL S + + G +G+A+ S+G+++V D NH + +
Sbjct: 700 GSFLSYINT--SAEPLY-GPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 362 (132.5 bits), Expect = 2.4e-32, P = 2.4e-32
Identities = 80/228 (35%), Positives = 124/228 (54%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
R+Q+FD +G + S+ + +E L P+G+A+ G++ V D+GN+
Sbjct: 691 SRIQVFDSSGSFL-SYINTSAEP--LYGPQGLALTSDGHVVVADAGNH 735
Score = 162 (62.1 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 31/85 (36%), Positives = 44/85 (51%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWP 100
FK GS G G F P G+AV + +I+VAD N R+QV F N P
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGP 716
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
+G+A+ D +VVAD+ NH + ++
Sbjct: 717 QGLALTSDGHVVVADAGNHCFKAYR 741
>RGD|70074 [details] [associations]
symbol:Trim3 "tripartite motif-containing 3" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IEA;ISO;IDA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 RGD:70074 Prosite:PS00518 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0015031
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0005769 eggNOG:COG3391 InterPro:IPR013017
PROSITE:PS51125 InterPro:IPR017907 KO:K11997 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 HOGENOM:HOG000220817 HOVERGEN:HBG054843
CTD:10612 EMBL:AF036255 IPI:IPI00196677 RefSeq:NP_113974.1
UniGene:Rn.203982 ProteinModelPortal:O70277 IntAct:O70277
STRING:O70277 PhosphoSite:O70277 GeneID:83616 KEGG:rno:83616
UCSC:RGD:70074 InParanoid:O70277 NextBio:616169 ArrayExpress:O70277
Genevestigator:O70277 GermOnline:ENSRNOG00000018356 Uniprot:O70277
Length = 744
Score = 407 (148.3 bits), Expect = 3.2e-37, P = 3.2e-37
Identities = 101/284 (35%), Positives = 143/284 (50%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT ++ IVVADS+N +QV K
Sbjct: 472 LVFRVGSRGREKGEFTNLHPLSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 531
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 532 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 586
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 587 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 639
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 640 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 699
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL S + + G +G+A+ S+G+++V D NH + +
Sbjct: 700 GSFLSYINT--SAEPLY-GPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 362 (132.5 bits), Expect = 2.4e-32, P = 2.4e-32
Identities = 80/228 (35%), Positives = 124/228 (54%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
R+Q+FD +G + S+ + +E L P+G+A+ G++ V D+GN+
Sbjct: 691 SRIQVFDSSGSFL-SYINTSAEP--LYGPQGLALTSDGHVVVADAGNH 735
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 31/85 (36%), Positives = 44/85 (51%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWP 100
FK GS G G F P G+AV + +I+VAD N R+QV F N P
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGP 716
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
+G+A+ D +VVAD+ NH + ++
Sbjct: 717 QGLALTSDGHVVVADAGNHCFKAYR 741
>UNIPROTKB|O70277 [details] [associations]
symbol:Trim3 "Tripartite motif-containing protein 3"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 InterPro:IPR001298 InterPro:IPR003649
Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 SMART:SM00502 SMART:SM00557 RGD:70074
Prosite:PS00518 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 GO:GO:0015031 Gene3D:2.120.10.30 InterPro:IPR011042
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 GO:GO:0005769 eggNOG:COG3391
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907 KO:K11997
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
HOGENOM:HOG000220817 HOVERGEN:HBG054843 CTD:10612 EMBL:AF036255
IPI:IPI00196677 RefSeq:NP_113974.1 UniGene:Rn.203982
ProteinModelPortal:O70277 IntAct:O70277 STRING:O70277
PhosphoSite:O70277 GeneID:83616 KEGG:rno:83616 UCSC:RGD:70074
InParanoid:O70277 NextBio:616169 ArrayExpress:O70277
Genevestigator:O70277 GermOnline:ENSRNOG00000018356 Uniprot:O70277
Length = 744
Score = 407 (148.3 bits), Expect = 3.2e-37, P = 3.2e-37
Identities = 101/284 (35%), Positives = 143/284 (50%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT ++ IVVADS+N +QV K
Sbjct: 472 LVFRVGSRGREKGEFTNLHPLSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 531
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 532 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 586
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 587 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 639
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ+F
Sbjct: 640 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSS 699
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL S + + G +G+A+ S+G+++V D NH + +
Sbjct: 700 GSFLSYINT--SAEPLY-GPQGLALTSDGHVVVADAGNHCFKAY 740
Score = 362 (132.5 bits), Expect = 2.4e-32, P = 2.4e-32
Identities = 80/228 (35%), Positives = 124/228 (54%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
R+Q+FD +G + S+ + +E L P+G+A+ G++ V D+GN+
Sbjct: 691 SRIQVFDSSGSFL-SYINTSAEP--LYGPQGLALTSDGHVVVADAGNH 735
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 31/85 (36%), Positives = 44/85 (51%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWP 100
FK GS G G F P G+AV + +I+VAD N R+QV F N P
Sbjct: 657 FKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGP 716
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
+G+A+ D +VVAD+ NH + ++
Sbjct: 717 QGLALTSDGHVVVADAGNHCFKAYR 741
>ZFIN|ZDB-GENE-080522-4 [details] [associations]
symbol:trim3a "tripartite motif-containing 3a"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001258
InterPro:IPR001298 InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
SMART:SM00502 SMART:SM00557 Prosite:PS00518 ZFIN:ZDB-GENE-080522-4
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GeneTree:ENSGT00550000074377 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 EMBL:AL935181 IPI:IPI00491402
Ensembl:ENSDART00000093367 Uniprot:E7F1U3
Length = 774
Score = 403 (146.9 bits), Expect = 9.9e-37, P = 9.9e-37
Identities = 106/310 (34%), Positives = 161/310 (51%)
Query: 29 TTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH--- 85
TT + + + L F++G+RG E G F+ +GI+ IVVADS+N +QV F +
Sbjct: 470 TTKKKENPIEDELIFRVGTRGRERGEFSNLQGISTTSSGRIVVADSNNQCIQV-FSNDGQ 528
Query: 86 FDLKTNCVFLA---FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG 142
F LK + P G+AV + I+VAD N + +F DG F K G AG
Sbjct: 529 FKLKFGVRGRSPGQLQRPTGVAVDMNGDIIVADYDNRWLSIFSPDGKFKNKIG-----AG 583
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV---FQSDGTFVGKFGSMG------- 192
+L P +AV +I +D+ V IF NG++ F + GT +F
Sbjct: 584 RLMGPKGVAVDKNGHIITADNKACCVFIFQSNGKLVTKFGAKGTSERQFADKSAPNTPTE 643
Query: 193 ---NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR 249
+K+G PH++A++N N ++V+D +NH V++++ +G + FGS G GQ P
Sbjct: 644 PKQSKSGPAFSPHFVAINNKNEIVVTDFHNHSVKVYNADGEFLFKFGSHGEGNGQFNAPT 703
Query: 250 GVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVC 309
GVAVD G I V D GN+RIQ+F G FL + D + G +G+A+ S+G++ V
Sbjct: 704 GVAVDGNGNIIVADWGNSRIQVFDSSGSFLSYINT--TADPLY-GPQGLALTSDGHVAVA 760
Query: 310 DRENHRIQVF 319
D NH +V+
Sbjct: 761 DSGNHCFKVY 770
Score = 128 (50.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 32/85 (37%), Positives = 44/85 (51%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWP 100
FK GS G G F P G+AV + +I+VAD N R+QV F N P
Sbjct: 687 FKFGSHGEGNGQFNAPTGVAVDGNGNIIVADWGNSRIQVFDSSGSFLSYINTTADPLYGP 746
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
+G+A+ D + VADS NH +V++
Sbjct: 747 QGLALTSDGHVAVADSGNHCFKVYR 771
>ZFIN|ZDB-GENE-070112-1132 [details] [associations]
symbol:trim3b "tripartite motif-containing 3b"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 Prosite:PS00518 ZFIN:ZDB-GENE-070112-1132
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GeneTree:ENSGT00550000074377 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 EMBL:BX511060 EMBL:BX530019
EMBL:BX530069 IPI:IPI00931336 Ensembl:ENSDART00000109183
Bgee:E7F959 Uniprot:E7F959
Length = 772
Score = 400 (145.9 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 105/309 (33%), Positives = 157/309 (50%)
Query: 29 TTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDL 88
TT + + + L +++G+RG E G FT +GI+ ++VADS+N +QV
Sbjct: 468 TTKKKENPIEDELIYRVGTRGREKGEFTNLQGISASISGRVIVADSNNQCIQVFTNDGQF 527
Query: 89 KTNCVFLA-----FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
K P G+AV + ++VAD N + +F DG F K G AG+
Sbjct: 528 KARFGVRGRSPGQLQRPTGVAVDTNGDVIVADYDNRWISIFSPDGKFKNKIG-----AGR 582
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV---FQSDGT----FVGKFGSMG---- 192
L P +AV +I D+ V IF NG++ F + GT F K GS
Sbjct: 583 LMGPKGVAVDRNGHIIAVDNKACCVFIFQSNGKLVTKFGARGTSDRQFAEKSGSKCALEQ 642
Query: 193 --NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRG 250
+K+G PH++AV+N N ++V+D +NH V+++ +G + FGS G GQ P G
Sbjct: 643 KFSKSGPGFSPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTG 702
Query: 251 VAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
VAVD G I V D GN+RIQ+F G FL S D + G +G+A+ S+G+++V D
Sbjct: 703 VAVDVNGNIIVADWGNSRIQVFDSAGSFLSYINT--SADPLY-GPQGLALTSDGHVVVAD 759
Query: 311 RENHRIQVF 319
NH +V+
Sbjct: 760 SGNHCFKVY 768
Score = 130 (50.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 33/85 (38%), Positives = 45/85 (52%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHFDLKTNCVFLAFTWP 100
FK GS G G F P G+AV + +I+VAD N R+QV F N P
Sbjct: 685 FKFGSHGEGNGQFNAPTGVAVDVNGNIIVADWGNSRIQVFDSAGSFLSYINTSADPLYGP 744
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ 125
+G+A+ D +VVADS NH +V++
Sbjct: 745 QGLALTSDGHVVVADSGNHCFKVYR 769
>FB|FBgn0259745 [details] [associations]
symbol:wech "wech" species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0033632 "regulation of cell-cell
adhesion mediated by integrin" evidence=IPI] [GO:0005927 "muscle
tendon junction" evidence=IDA] [GO:0030674 "protein binding,
bridging" evidence=IPI] [GO:0016203 "muscle attachment"
evidence=IMP] InterPro:IPR000315 InterPro:IPR001258 Pfam:PF00643
Pfam:PF01436 PROSITE:PS50119 SMART:SM00336 EMBL:AE013599
GO:GO:0030154 GO:GO:0046872 Gene3D:2.120.10.30 InterPro:IPR011042
GO:GO:0008270 GO:GO:0005622 GO:GO:0005927 GO:GO:0016203
GO:GO:0033632 eggNOG:COG3391 InterPro:IPR013017 PROSITE:PS51125
GeneTree:ENSGT00550000074377 GO:GO:0002168 KO:K12035 EMBL:AY060421
EMBL:BT010087 EMBL:BT030403 RefSeq:NP_001137614.1
RefSeq:NP_001137615.1 RefSeq:NP_524772.2 RefSeq:NP_724567.1
RefSeq:NP_724568.1 UniGene:Dm.1824 ProteinModelPortal:Q9V4M2
SMR:Q9V4M2 DIP:DIP-21516N MINT:MINT-1569933 STRING:Q9V4M2
PaxDb:Q9V4M2 EnsemblMetazoa:FBtr0300080 EnsemblMetazoa:FBtr0300081
EnsemblMetazoa:FBtr0300082 EnsemblMetazoa:FBtr0300083
EnsemblMetazoa:FBtr0300084 GeneID:44653 KEGG:dme:Dmel_CG42396
CTD:44653 FlyBase:FBgn0259745 OMA:TEGHEDG OrthoDB:EOG4ZPCB5
PhylomeDB:Q9V4M2 ChiTaRS:wech GenomeRNAi:44653 NextBio:837513
Bgee:Q9V4M2 GermOnline:CG1624 Uniprot:Q9V4M2
Length = 832
Score = 369 (135.0 bits), Expect = 5.8e-33, P = 5.8e-33
Identities = 100/291 (34%), Positives = 145/291 (49%)
Query: 33 SQYLQKRRLQFKIGSRGSEPGC-FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTN 91
S + L +++ S PG F+ PR P +V +++ + + F +
Sbjct: 489 SSGMSSAALDWELNGLRSSPGLHFSAPRTTQAIPGCMDLVKVRNSNALSLSFATEGHEDG 548
Query: 92 CVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
V + P G+ V ++V+D N+RVQVF DG+ KFG G G+ + P I
Sbjct: 549 QV----SRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNGEFDLPAGIC 604
Query: 152 VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
V NR+IV D +NHRVQIF +G F+ KFGS G + GQ ++P +AV++ +
Sbjct: 605 VDVDNRIIVVDKDNHRVQIFTASG-------VFLLKFGSYGKEYGQFQYPWDVAVNSRRQ 657
Query: 212 VIVSDSNNHRVQIFDVNGRVITS--FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
++V+DS NHR+Q FD GR I F + G +G + PRGV G I V D N+ +
Sbjct: 658 IVVTDSRNHRIQQFDSEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNIIVSDFDNHCL 716
Query: 270 QIFTPD-GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ PD L G GSG EF G+ G I+V D +N RI VF
Sbjct: 717 YLIDPDINDILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVF 767
Score = 360 (131.8 bits), Expect = 5.4e-32, P = 5.4e-32
Identities = 89/245 (36%), Positives = 127/245 (51%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L + G E G + P G+ V ++V+D N+RVQV P LK
Sbjct: 536 LSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGVGNG 595
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
F P GI V DN I+V D NHRVQ+F + G F+ KFGS G + GQ ++P +AV++
Sbjct: 596 EFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSR 655
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+++V+DS NHR+Q FD GR + V F + G G + P + + T +IVS
Sbjct: 656 RQIVVTDSRNHRIQQFDSEGRFIRQ---IV--FDNHGQTKG-IASPRGVCYTPTGNIIVS 709
Query: 216 DSNNHRVQIFDVNGRVITSF-GSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
D +NH + + D + I S G EGS + P G+ DD+G I V DS N RI +F
Sbjct: 710 DFDNHCLYLIDPDINDILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVFNQ 769
Query: 275 DGQFL 279
+ F+
Sbjct: 770 NLDFM 774
>UNIPROTKB|D4A8U3 [details] [associations]
symbol:Trim3 "Tripartite motif-containing protein 3"
species:10116 "Rattus norvegicus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001258
InterPro:IPR001298 InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
SMART:SM00502 SMART:SM00557 RGD:70074 Prosite:PS00518
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
OrthoDB:EOG46T30V IPI:IPI00950833 Ensembl:ENSRNOT00000067111
ArrayExpress:D4A8U3 Uniprot:D4A8U3
Length = 715
Score = 365 (133.5 bits), Expect = 1.0e-32, P = 1.0e-32
Identities = 90/249 (36%), Positives = 124/249 (49%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 531
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 532 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 586
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 587 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 639
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
D +NH V+++ +G + FGS G GQ P GVAVD G I V D GN+RIQ++ +
Sbjct: 640 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVWRME 699
Query: 276 GQFLRAFGC 284
R C
Sbjct: 700 SPRSRWVWC 708
Score = 361 (132.1 bits), Expect = 2.8e-32, P = 2.8e-32
Identities = 85/223 (38%), Positives = 123/223 (55%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT +G++ IVVADS+N +QVF ++G F +FG G GQL+ P +AV
Sbjct: 486 FTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTNG 545
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+IV+D +N V IF G+ F K G AG+L P +AV +IV D
Sbjct: 546 DIIVADYDNRWVSIFSPEGK-------FKTKIG-----AGRLMGPKGVAVDRNGHIIVVD 593
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ + V F NG+++ FG G+ + P VAV+++ I V D N+ +++++ DG
Sbjct: 594 NKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADG 653
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+FL FG G G+G+F GVAV SNGNI+V D N RIQV+
Sbjct: 654 EFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVW 696
Score = 307 (113.1 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 66/186 (35%), Positives = 99/186 (53%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +IV+D N
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGN 690
Query: 220 HRVQIF 225
R+Q++
Sbjct: 691 SRIQVW 696
Score = 162 (62.1 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
>UNIPROTKB|E9PKS6 [details] [associations]
symbol:TRIM3 "Tripartite motif-containing protein 3"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001258
InterPro:IPR001298 InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
SMART:SM00502 SMART:SM00557 Prosite:PS00518 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR013017 PROSITE:PS51125 EMBL:AC084337 InterPro:IPR017907
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 HGNC:HGNC:10064
IPI:IPI00983536 ProteinModelPortal:E9PKS6 SMR:E9PKS6
Ensembl:ENST00000530899 ArrayExpress:E9PKS6 Bgee:E9PKS6
Uniprot:E9PKS6
Length = 742
Score = 336 (123.3 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 80/214 (37%), Positives = 117/214 (54%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT +G++ IVVADS+N +QVF ++G F +FG G GQL+ P +AV
Sbjct: 486 FTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTNG 545
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+IV+D +N V IF G+ F K G AG+L P +AV +IV D
Sbjct: 546 DIIVADYDNRWVSIFSPEGK-------FKTKIG-----AGRLMGPKGVAVDRNGHIIVVD 593
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ + V F NG+++ FG G+ + P VAV+++ I V D N+ +++++ DG
Sbjct: 594 NKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADG 653
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL-VC 309
+FL FG G G+G+F GVAV SNGNI+ VC
Sbjct: 654 EFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIDVC 687
Score = 328 (120.5 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 81/224 (36%), Positives = 111/224 (49%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA---- 96
L F++GSRG E G FT +G++ IVVADS+N +QV K
Sbjct: 472 LVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPG 531
Query: 97 -FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
P G+AV + I+VAD N V +F +G F K G AG+L P +AV
Sbjct: 532 QLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIG-----AGRLMGPKGVAVDRN 586
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 215
+IV D N +F FQ +G VG+FG G PH++AV+N N ++V+
Sbjct: 587 GHIIVVD--NKSCCVF-----TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVT 639
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYI 259
D +NH V+++ +G + FGS G GQ P GVAVD G I
Sbjct: 640 DFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNI 683
Score = 277 (102.6 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 61/174 (35%), Positives = 90/174 (51%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW 99
+ +F+ G RG PG P G+AV + I+VAD N V + P KT
Sbjct: 518 QFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMG 577
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+AV + I+V D+ + V FQ +G VG+FG G PH++AV+N N ++
Sbjct: 578 PKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIV 637
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
V+D +NH V +V+ +DG F+ KFGS G GQ P +AV + +I
Sbjct: 638 VTDFHNHSV-------KVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNII 684
Score = 274 (101.5 bits), Expect = 7.5e-23, P = 7.5e-23
Identities = 65/189 (34%), Positives = 103/189 (54%)
Query: 131 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGS 190
V + GS G + G+ + ++ +++ R++V+DSNN +Q VF ++G F +FG
Sbjct: 473 VFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQ-------VFSNEGQFKFRFGV 525
Query: 191 MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRG 250
G GQL+ P +AV +IV+D +N V IF G+ T G+ G+L P+G
Sbjct: 526 RGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGA-----GRLMGPKG 580
Query: 251 VAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
VAVD G+I V D+ + + F P+G+ + FG G+ D F G VAV + I+V D
Sbjct: 581 VAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTD 640
Query: 311 RENHRIQVF 319
NH ++V+
Sbjct: 641 FHNHSVKVY 649
Score = 162 (62.1 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ ++ GS G E+G+ +GV+ G I V DS N IQ+F+ +GQF FG G
Sbjct: 468 IEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRG 527
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GVAV +NG+I+V D +N + +F
Sbjct: 528 RSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIF 560
>UNIPROTKB|Q74C86 [details] [associations]
symbol:GSU1788 "NHL repeat domain lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001258 Pfam:PF01436 Gene3D:2.120.10.30
InterPro:IPR011042 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR013017 PROSITE:PS51125 HOGENOM:HOG000275895
RefSeq:NP_952838.2 GeneID:2686481 KEGG:gsu:GSU1788 PATRIC:22026417
ProtClustDB:CLSK828558 BioCyc:GSUL243231:GH27-1808-MONOMER
Uniprot:Q74C86
Length = 354
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 95/306 (31%), Positives = 148/306 (48%)
Query: 21 VSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSN---H 77
+SG QV P + R L+F G + F P G+ + V+DSS+ H
Sbjct: 60 ISGPEQVKAEPGAI---ARFLEFVTGEQFKHVP-FVTPYGVVSDGGTLLFVSDSSSGVVH 115
Query: 78 RVQVCFPH--FDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG 135
R+ + + ++ FL+ P G+A+ P + V+DS N +V VF DG F+
Sbjct: 116 RIDLARQKVSYIVRAGDEFLSS--PVGLALSPSGDLYVSDSVNAKVYVFSRDGEFLRVLA 173
Query: 136 SMGNKAGQLE--HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
GQ++ P +AV++ + V D H++++F+V+GR F+G F +
Sbjct: 174 D-----GQVDFKRPAGLAVNSKGVLFVVDVLAHKLKVFNVSGR-------FLGDFPP-DD 220
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
G+L P ++AV ++V V+D+ N V+++D GR + S G G G PRGVAV
Sbjct: 221 IGGKLNLPSHVAVDKDDKVYVTDALNFTVKVYDSAGRYLRSIGEIGDAPGSFARPRGVAV 280
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
D + V D+ + QIF +GQ L G G GEF G+ + N I + D N
Sbjct: 281 DSDLNVYVIDAAFDNFQIFNQEGQLLLFVGKPGKKSGEFYMPSGIHIDRNDRIFISDSYN 340
Query: 314 HRIQVF 319
R+QVF
Sbjct: 341 RRVQVF 346
Score = 196 (74.1 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 53/176 (30%), Positives = 84/176 (47%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHF--DLKTNCVFLAFTWPRGIAVGPDNS 110
F P G+AV + V D H+++V F D + + P +AV D+
Sbjct: 179 FKRPAGLAVNSKGVLFVVDVLAHKLKVFNVSGRFLGDFPPDDIGGKLNLPSHVAVDKDDK 238
Query: 111 IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
+ V D+ N V+V+ S G ++ G +G+ G P +AV + V V D+ QI
Sbjct: 239 VYVTDALNFTVKVYDSAGRYLRSIGEIGDAPGSFARPRGVAVDSDLNVYVIDAAFDNFQI 298
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
F+ G++ FVGK G K+G+ P I + +R+ +SDS N RVQ+F+
Sbjct: 299 FNQEGQLL----LFVGK---PGKKSGEFYMPSGIHIDRNDRIFISDSYNRRVQVFE 347
Score = 147 (56.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 37/125 (29%), Positives = 61/125 (48%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-----AFTWPRGIAVGP 107
G P +AV D+ + V D+ N V+V + + +F PRG+AV
Sbjct: 223 GKLNLPSHVAVDKDDKVYVTDALNFTVKVYDSAGRYLRSIGEIGDAPGSFARPRGVAVDS 282
Query: 108 DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 167
D ++ V D++ Q+F +G + G G K+G+ P I + +R+ +SDS N R
Sbjct: 283 DLNVYVIDAAFDNFQIFNQEGQLLLFVGKPGKKSGEFYMPSGIHIDRNDRIFISDSYNRR 342
Query: 168 VQIFD 172
VQ+F+
Sbjct: 343 VQVFE 347
>TIGR_CMR|GSU_1788 [details] [associations]
symbol:GSU_1788 "NHL repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001258 Pfam:PF01436 Gene3D:2.120.10.30
InterPro:IPR011042 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR013017 PROSITE:PS51125 HOGENOM:HOG000275895
RefSeq:NP_952838.2 GeneID:2686481 KEGG:gsu:GSU1788 PATRIC:22026417
ProtClustDB:CLSK828558 BioCyc:GSUL243231:GH27-1808-MONOMER
Uniprot:Q74C86
Length = 354
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 95/306 (31%), Positives = 148/306 (48%)
Query: 21 VSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSN---H 77
+SG QV P + R L+F G + F P G+ + V+DSS+ H
Sbjct: 60 ISGPEQVKAEPGAI---ARFLEFVTGEQFKHVP-FVTPYGVVSDGGTLLFVSDSSSGVVH 115
Query: 78 RVQVCFPH--FDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG 135
R+ + + ++ FL+ P G+A+ P + V+DS N +V VF DG F+
Sbjct: 116 RIDLARQKVSYIVRAGDEFLSS--PVGLALSPSGDLYVSDSVNAKVYVFSRDGEFLRVLA 173
Query: 136 SMGNKAGQLE--HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
GQ++ P +AV++ + V D H++++F+V+GR F+G F +
Sbjct: 174 D-----GQVDFKRPAGLAVNSKGVLFVVDVLAHKLKVFNVSGR-------FLGDFPP-DD 220
Query: 194 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
G+L P ++AV ++V V+D+ N V+++D GR + S G G G PRGVAV
Sbjct: 221 IGGKLNLPSHVAVDKDDKVYVTDALNFTVKVYDSAGRYLRSIGEIGDAPGSFARPRGVAV 280
Query: 254 DDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN 313
D + V D+ + QIF +GQ L G G GEF G+ + N I + D N
Sbjct: 281 DSDLNVYVIDAAFDNFQIFNQEGQLLLFVGKPGKKSGEFYMPSGIHIDRNDRIFISDSYN 340
Query: 314 HRIQVF 319
R+QVF
Sbjct: 341 RRVQVF 346
Score = 196 (74.1 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 53/176 (30%), Positives = 84/176 (47%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQV--CFPHF--DLKTNCVFLAFTWPRGIAVGPDNS 110
F P G+AV + V D H+++V F D + + P +AV D+
Sbjct: 179 FKRPAGLAVNSKGVLFVVDVLAHKLKVFNVSGRFLGDFPPDDIGGKLNLPSHVAVDKDDK 238
Query: 111 IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
+ V D+ N V+V+ S G ++ G +G+ G P +AV + V V D+ QI
Sbjct: 239 VYVTDALNFTVKVYDSAGRYLRSIGEIGDAPGSFARPRGVAVDSDLNVYVIDAAFDNFQI 298
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
F+ G++ FVGK G K+G+ P I + +R+ +SDS N RVQ+F+
Sbjct: 299 FNQEGQLL----LFVGK---PGKKSGEFYMPSGIHIDRNDRIFISDSYNRRVQVFE 347
Score = 147 (56.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 37/125 (29%), Positives = 61/125 (48%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-----AFTWPRGIAVGP 107
G P +AV D+ + V D+ N V+V + + +F PRG+AV
Sbjct: 223 GKLNLPSHVAVDKDDKVYVTDALNFTVKVYDSAGRYLRSIGEIGDAPGSFARPRGVAVDS 282
Query: 108 DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHR 167
D ++ V D++ Q+F +G + G G K+G+ P I + +R+ +SDS N R
Sbjct: 283 DLNVYVIDAAFDNFQIFNQEGQLLLFVGKPGKKSGEFYMPSGIHIDRNDRIFISDSYNRR 342
Query: 168 VQIFD 172
VQ+F+
Sbjct: 343 VQVFE 347
>UNIPROTKB|Q3AFJ0 [details] [associations]
symbol:CHY_0222 "NHL repeat protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001258 Pfam:PF01436 EMBL:CP000141
GenomeReviews:CP000141_GR Gene3D:2.120.10.30 InterPro:IPR011042
eggNOG:COG3391 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR013658 Pfam:PF08450 RefSeq:YP_359094.1
ProteinModelPortal:Q3AFJ0 STRING:Q3AFJ0 GeneID:3728324
KEGG:chy:CHY_0222 PATRIC:21273629 HOGENOM:HOG000131209 OMA:LTINIRT
ProtClustDB:CLSK2772374 BioCyc:CHYD246194:GJCN-223-MONOMER
Uniprot:Q3AFJ0
Length = 335
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 96/284 (33%), Positives = 140/284 (49%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------AFTW 99
G++ F P +AV N I V D+ N RVQV FD N +F F +
Sbjct: 70 GTDQNPFKKPMAVAVS-GNRIYVTDTGNQRVQV----FDYDGNPLFTFGKPGTDKGQFKF 124
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GIAV D + VAD N ++ VF S+G F FG+ + + P + +S NR+
Sbjct: 125 PYGIAVDGDGKVYVADMYNGKISVFNSEGIFQYYFGNPSD----ISRPAGLFISG-NRLY 179
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D ++V F + DG V +FG MG G+ P+ + V+N ++ V+DS N
Sbjct: 180 VADVGKNKVTAFTL-------DGKKVLEFGKMGTANGEFRAPNCVWVAN-GKIYVADSGN 231
Query: 220 HRVQIFDV-NGRVITSFGSEGSEEGQ-LKF--PRGVAVDDQGYISVGDSGNNRIQIFTPD 275
RVQ+F++ G T G G+ G+ F PRGV VD +G + V D+ N+R+ F
Sbjct: 232 DRVQVFNLLGGYAYTLTG--GNNNGETFSFINPRGVGVDGRGVLYVVDNLNSRVCGFDEQ 289
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL FG G+ +F G+ V G I + D N R+ V+
Sbjct: 290 GNFLFTFGSKGAELNQFILPNGLFVDDQGRIYITDTVNQRVVVY 333
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 75/235 (31%), Positives = 118/235 (50%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-----CFPHFDLKTNCVFLAF 97
F G G++ G F +P GIAV D + VAD N ++ V F ++ + +
Sbjct: 110 FTFGKPGTDKGQFKFPYGIAVDGDGKVYVADMYNGKISVFNSEGIFQYYFGNPSDI---- 165
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
+ P G+ + N + VAD ++V F DG V +FG MG G+ P+ + V+N +
Sbjct: 166 SRPAGLFIS-GNRLYVADVGKNKVTAFTLDGKKVLEFGKMGTANGEFRAPNCVWVAN-GK 223
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
+ V+DS N RVQ+F++ G T G G+ + +P + V + V D+
Sbjct: 224 IYVADSGNDRVQVFNLLGGYAY---TLTG--GNNNGETFSFINPRGVGVDGRGVLYVVDN 278
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
N RV FD G + +FGS+G+E Q P G+ VDDQG I + D+ N R+ ++
Sbjct: 279 LNSRVCGFDEQGNFLFTFGSKGAELNQFILPNGLFVDDQGRIYITDTVNQRVVVY 333
>TIGR_CMR|CHY_0222 [details] [associations]
symbol:CHY_0222 "NHL repeat protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001258 Pfam:PF01436 EMBL:CP000141
GenomeReviews:CP000141_GR Gene3D:2.120.10.30 InterPro:IPR011042
eggNOG:COG3391 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR013658 Pfam:PF08450 RefSeq:YP_359094.1
ProteinModelPortal:Q3AFJ0 STRING:Q3AFJ0 GeneID:3728324
KEGG:chy:CHY_0222 PATRIC:21273629 HOGENOM:HOG000131209 OMA:LTINIRT
ProtClustDB:CLSK2772374 BioCyc:CHYD246194:GJCN-223-MONOMER
Uniprot:Q3AFJ0
Length = 335
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 96/284 (33%), Positives = 140/284 (49%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------AFTW 99
G++ F P +AV N I V D+ N RVQV FD N +F F +
Sbjct: 70 GTDQNPFKKPMAVAVS-GNRIYVTDTGNQRVQV----FDYDGNPLFTFGKPGTDKGQFKF 124
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P GIAV D + VAD N ++ VF S+G F FG+ + + P + +S NR+
Sbjct: 125 PYGIAVDGDGKVYVADMYNGKISVFNSEGIFQYYFGNPSD----ISRPAGLFISG-NRLY 179
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 219
V+D ++V F + DG V +FG MG G+ P+ + V+N ++ V+DS N
Sbjct: 180 VADVGKNKVTAFTL-------DGKKVLEFGKMGTANGEFRAPNCVWVAN-GKIYVADSGN 231
Query: 220 HRVQIFDV-NGRVITSFGSEGSEEGQ-LKF--PRGVAVDDQGYISVGDSGNNRIQIFTPD 275
RVQ+F++ G T G G+ G+ F PRGV VD +G + V D+ N+R+ F
Sbjct: 232 DRVQVFNLLGGYAYTLTG--GNNNGETFSFINPRGVGVDGRGVLYVVDNLNSRVCGFDEQ 289
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G FL FG G+ +F G+ V G I + D N R+ V+
Sbjct: 290 GNFLFTFGSKGAELNQFILPNGLFVDDQGRIYITDTVNQRVVVY 333
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 75/235 (31%), Positives = 118/235 (50%)
Query: 43 FKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQV-----CFPHFDLKTNCVFLAF 97
F G G++ G F +P GIAV D + VAD N ++ V F ++ + +
Sbjct: 110 FTFGKPGTDKGQFKFPYGIAVDGDGKVYVADMYNGKISVFNSEGIFQYYFGNPSDI---- 165
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
+ P G+ + N + VAD ++V F DG V +FG MG G+ P+ + V+N +
Sbjct: 166 SRPAGLFIS-GNRLYVADVGKNKVTAFTLDGKKVLEFGKMGTANGEFRAPNCVWVAN-GK 223
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
+ V+DS N RVQ+F++ G T G G+ + +P + V + V D+
Sbjct: 224 IYVADSGNDRVQVFNLLGGYAY---TLTG--GNNNGETFSFINPRGVGVDGRGVLYVVDN 278
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
N RV FD G + +FGS+G+E Q P G+ VDDQG I + D+ N R+ ++
Sbjct: 279 LNSRVCGFDEQGNFLFTFGSKGAELNQFILPNGLFVDDQGRIYITDTVNQRVVVY 333
>FB|FBgn0010300 [details] [associations]
symbol:brat "brain tumor" species:7227 "Drosophila
melanogaster" [GO:0048477 "oogenesis" evidence=IMP] [GO:0030371
"translation repressor activity" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006417 "regulation of translation" evidence=IMP;TAS]
[GO:0016072 "rRNA metabolic process" evidence=IMP] [GO:0009303
"rRNA transcription" evidence=IMP] [GO:0045182 "translation
regulator activity" evidence=TAS] [GO:0051726 "regulation of cell
cycle" evidence=NAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007405 "neuroblast proliferation" evidence=IMP] [GO:0045179
"apical cortex" evidence=IDA] [GO:0007402 "ganglion mother cell
fate determination" evidence=IMP] [GO:0045180 "basal cortex"
evidence=IDA] [GO:0008356 "asymmetric cell division" evidence=IMP]
[GO:0007406 "negative regulation of neuroblast proliferation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0055060 "asymmetric neuroblast division resulting in ganglion
mother cell formation" evidence=IMP] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0035282 "segmentation" evidence=IMP]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0050767 "regulation of
neurogenesis" evidence=IMP] InterPro:IPR000315 InterPro:IPR001258
Pfam:PF00643 Pfam:PF01436 PROSITE:PS50119 SMART:SM00336
GO:GO:0005737 GO:GO:0007411 GO:GO:0006911 GO:GO:0007420
EMBL:AE014134 GO:GO:0007406 GO:GO:0046872 GO:GO:0030371
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0048477
GO:GO:0035282 eggNOG:COG3391 InterPro:IPR013017 PROSITE:PS51125
GO:GO:0009303 GO:GO:0008356 EMBL:AF119332 EMBL:AF195870
EMBL:AF195871 EMBL:AF195872 EMBL:AF195873 EMBL:AB022432
EMBL:AY122207 EMBL:AY129441 EMBL:DQ138866 RefSeq:NP_476945.1
RefSeq:NP_599129.1 RefSeq:NP_995726.1 UniGene:Dm.6426 PDB:1Q7F
PDBsum:1Q7F ProteinModelPortal:Q8MQJ9 SMR:Q8MQJ9 DIP:DIP-37857N
IntAct:Q8MQJ9 MINT:MINT-1602052 STRING:Q8MQJ9 PaxDb:Q8MQJ9
PRIDE:Q8MQJ9 EnsemblMetazoa:FBtr0081158 EnsemblMetazoa:FBtr0081159
EnsemblMetazoa:FBtr0081160 GeneID:35197 KEGG:dme:Dmel_CG10719
CTD:35197 FlyBase:FBgn0010300 GeneTree:ENSGT00550000074377
InParanoid:Q8MQJ9 KO:K11997 OrthoDB:EOG4K0P3D PhylomeDB:Q8MQJ9
ChiTaRS:brat EvolutionaryTrace:Q8MQJ9 GenomeRNAi:35197
NextBio:792330 Bgee:Q8MQJ9 GermOnline:CG10719 GO:GO:0055060
GO:GO:0007402 Uniprot:Q8MQJ9
Length = 1037
Score = 317 (116.6 bits), Expect = 3.4e-27, P = 3.4e-27
Identities = 90/291 (30%), Positives = 144/291 (49%)
Query: 31 PRSQYLQKRRLQF-KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLK 89
P+SQ +++ + K G G G FT P G+AV N I+VAD++NHR+Q+ K
Sbjct: 755 PKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFK 814
Query: 90 TN---CVFL--AFTWPRGIAVGPDNS-IVVADSS-NHRVQVFQSDGTFVGKFGSMGNKAG 142
C +P +AV ++ I+V + S H++Q++ G FV KFG A
Sbjct: 815 FQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG-----AT 869
Query: 143 QLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPH 202
L+HP + V N R+IV + RV IFD NG V KFG + LE P+
Sbjct: 870 ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-------KFGC----SKHLEFPN 918
Query: 203 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVG 262
+ V++ + +SD+ H V++F+ G+ + G EG +P GV ++ G I +
Sbjct: 919 GVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITN----YPIGVGINSNGEILIA 974
Query: 263 DSGNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRE 312
D+ NN + IFT DGQ + A + VA+M +G++++ ++
Sbjct: 975 DNHNNFNLTIFTQDGQLISAL----ESKVKHAQCFDVALMDDGSVVLASKD 1021
Score = 273 (101.2 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 71/189 (37%), Positives = 102/189 (53%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
KFG G GQ P +AV+ N +IV+D+NNHR+QIFD GR F +FG G
Sbjct: 769 KFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR-------FKFQFGECG 821
Query: 193 NKAGQLEHPHYIAV-SNTNRVIVSD-SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRG 250
+ QL +P+ +AV N+ +IV++ S H++QI++ G+ + FG+ L+ PRG
Sbjct: 822 KRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGAT-----ILQHPRG 876
Query: 251 VAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCD 310
V VD++G I V + R+ IF +G L FGC S EF GV V I + D
Sbjct: 877 VTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGC--SKHLEFPN--GVVVNDKQEIFISD 932
Query: 311 RENHRIQVF 319
H ++VF
Sbjct: 933 NRAHCVKVF 941
Score = 205 (77.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 52/145 (35%), Positives = 77/145 (53%)
Query: 176 RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSF 235
+++ G FV KFG A L+HP + V N R+IV + RV IFD NG V+ F
Sbjct: 854 QIYNQYGQFVRKFG-----ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKF 908
Query: 236 GSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL 295
G L+FP GV V+D+ I + D+ + +++F +GQ+LR G G+G
Sbjct: 909 GCSK----HLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIG----GEGITNYP 960
Query: 296 EGVAVMSNGNILVCDRENH-RIQVF 319
GV + SNG IL+ D N+ + +F
Sbjct: 961 IGVGINSNGEILIADNHNNFNLTIF 985
>WB|WBGene00003559 [details] [associations]
symbol:ncl-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0090071 "negative
regulation of ribosome biogenesis" evidence=IMP] InterPro:IPR000315
InterPro:IPR001258 InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436
PROSITE:PS50119 SMART:SM00336 SMART:SM00502 GO:GO:0005737
GO:GO:0016246 GO:GO:0046872 Gene3D:2.120.10.30 InterPro:IPR011042
GO:GO:0008270 eggNOG:COG3391 InterPro:IPR013017 PROSITE:PS51125
GeneTree:ENSGT00550000074377 KO:K11997 EMBL:FO080308 GO:GO:0090071
EMBL:AF047027 PIR:S44890 RefSeq:NP_498684.1 UniGene:Cel.34838
ProteinModelPortal:P34611 SMR:P34611 DIP:DIP-25978N IntAct:P34611
MINT:MINT-1111402 STRING:P34611 PaxDb:P34611 EnsemblMetazoa:ZK112.2
GeneID:176084 KEGG:cel:CELE_ZK112.2 UCSC:ZK112.2 CTD:176084
WormBase:ZK112.2 HOGENOM:HOG000019602 InParanoid:P34611 OMA:SGCKSNE
NextBio:891042 Uniprot:P34611
Length = 851
Score = 295 (108.9 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 71/194 (36%), Positives = 109/194 (56%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT P G+AV IVVAD++NHR+QVF +G F +FG G + GQL +P+ +AV+ T
Sbjct: 586 FTEPSGVAVNGQGDIVVADTNNHRIQVFDKEGRFKFQFGECGKRDGQLLYPNRVAVNRTT 645
Query: 157 R--VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
V+ S H++Q+++ G+ F+ KFG A L+HP + V + R+IV
Sbjct: 646 GDFVVTERSPTHQIQVYNQYGQ-------FLRKFG-----ANILQHPRGVCVDSKGRIIV 693
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
+ RV IFD+ G ++ F S L+FP GV +D+ I + D+ + I++F+
Sbjct: 694 VECKVMRVIIFDMFGNILQKF----SCSRYLEFPNGVCTNDKNEILISDNRAHCIKVFSY 749
Query: 275 DGQFLRAFGCWGSG 288
+GQ+LR G G G
Sbjct: 750 EGQYLRQIG--GEG 761
Score = 276 (102.2 bits), Expect = 6.0e-23, P = 6.0e-23
Identities = 79/259 (30%), Positives = 124/259 (47%)
Query: 32 RSQYLQKRRLQF-KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKT 90
RSQ +++ + K G G G FT P G+AV IVVAD++NHR+QV K
Sbjct: 562 RSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNGQGDIVVADTNNHRIQVFDKEGRFKF 621
Query: 91 N---CVFL--AFTWPRGIAVGPDNS--IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQ 143
C +P +AV +V S H++QV+ G F+ KFG A
Sbjct: 622 QFGECGKRDGQLLYPNRVAVNRTTGDFVVTERSPTHQIQVYNQYGQFLRKFG-----ANI 676
Query: 144 LEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY 203
L+HP + V + R+IV + RV IFD+ G + Q KF + LE P+
Sbjct: 677 LQHPRGVCVDSKGRIIVVECKVMRVIIFDMFGNILQ-------KFSC----SRYLEFPNG 725
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
+ ++ N +++SD+ H +++F G+ + G EG +P GV ++ G + V D
Sbjct: 726 VCTNDKNEILISDNRAHCIKVFSYEGQYLRQIGGEGVTN----YPIGVGINSLGEVVVAD 781
Query: 264 SGNN-RIQIFTPDGQFLRA 281
+ NN + +F+ DG + A
Sbjct: 782 NHNNFNLTVFSQDGTMIGA 800
Score = 262 (97.3 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 69/202 (34%), Positives = 102/202 (50%)
Query: 120 RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ 179
R Q+ + + KFG G GQ P +AV+ ++V+D+NNHR+Q+FD GR
Sbjct: 562 RSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNGQGDIVVADTNNHRIQVFDKEGR--- 618
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR--VIVSDSNNHRVQIFDVNGRVITSFGS 237
F +FG G + GQL +P+ +AV+ T V+ S H++Q+++ G+ + FG+
Sbjct: 619 ----FKFQFGECGKRDGQLLYPNRVAVNRTTGDFVVTERSPTHQIQVYNQYGQFLRKFGA 674
Query: 238 EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEG 297
L+ PRGV VD +G I V + R+ IF G L+ F C S EF G
Sbjct: 675 N-----ILQHPRGVCVDSKGRIIVVECKVMRVIIFDMFGNILQKFSC--SRYLEFPN--G 725
Query: 298 VAVMSNGNILVCDRENHRIQVF 319
V IL+ D H I+VF
Sbjct: 726 VCTNDKNEILISDNRAHCIKVF 747
Score = 178 (67.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 48/145 (33%), Positives = 76/145 (52%)
Query: 176 RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSF 235
+V+ G F+ KFG A L+HP + V + R+IV + RV IFD+ G ++ F
Sbjct: 660 QVYNQYGQFLRKFG-----ANILQHPRGVCVDSKGRIIVVECKVMRVIIFDMFGNILQKF 714
Query: 236 GSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGL 295
S L+FP GV +D+ I + D+ + I++F+ +GQ+LR G G+G
Sbjct: 715 ----SCSRYLEFPNGVCTNDKNEILISDNRAHCIKVFSYEGQYLRQIG----GEGVTNYP 766
Query: 296 EGVAVMSNGNILVCDRENH-RIQVF 319
GV + S G ++V D N+ + VF
Sbjct: 767 IGVGINSLGEVVVADNHNNFNLTVF 791
Score = 169 (64.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 61/249 (24%), Positives = 112/249 (44%)
Query: 32 RSQYLQKR-RLQFKIGSRGSEPGCFTWPRGIAVGPDNS--IVVADSSNHRVQVC--FPHF 86
R Q K R +F+ G G G +P +AV +V S H++QV + F
Sbjct: 609 RIQVFDKEGRFKFQFGECGKRDGQLLYPNRVAVNRTTGDFVVTERSPTHQIQVYNQYGQF 668
Query: 87 DLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH 146
K L PRG+ V I+V + RV +F G + KF + LE
Sbjct: 669 LRKFGANILQH--PRGVCVDSKGRIIVVECKVMRVIIFDMFGNILQKFSC----SRYLEF 722
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
P+ + ++ N +++SD+ H +++F G+ + G G+ G +P + +
Sbjct: 723 PNGVCTNDKNEILISDNRAHCIKVFSYEGQYLRQIG---GE--------GVTNYPIGVGI 771
Query: 207 SNTNRVIVSDS-NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPR--GVAVDDQGYISVGD 263
++ V+V+D+ NN + +F +G +I G+ E ++K + VA+ D G + +
Sbjct: 772 NSLGEVVVADNHNNFNLTVFSQDGTMI------GALESRVKHAQCFDVALVDDGSVVLA- 824
Query: 264 SGNNRIQIF 272
S + R+ ++
Sbjct: 825 SKDYRLYLY 833
>UNIPROTKB|Q74FJ1 [details] [associations]
symbol:GSU0617 "NHL repeat domain lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001258 Pfam:PF01436 Gene3D:2.120.10.30
InterPro:IPR011042 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR013017 PROSITE:PS51125 HOGENOM:HOG000275895
RefSeq:NP_951675.1 ProteinModelPortal:Q74FJ1 GeneID:2685411
KEGG:gsu:GSU0617 PATRIC:22023987 OMA:ERPRIEW ProtClustDB:CLSK827953
BioCyc:GSUL243231:GH27-610-MONOMER Uniprot:Q74FJ1
Length = 361
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 71/225 (31%), Positives = 110/225 (48%)
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
++ T P + + I VAD V VF V G A Q P + +
Sbjct: 76 MSLTKPLDVYADGQDRIYVADPGLRGVVVFNMKERSVSMLGGP-QAANQFNTPVSVTGDS 134
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ VSD+ + IFD R F+ F+ KA + R++V
Sbjct: 135 QGNIYVSDAEKGGILIFD---R-FEVPRRFID------TKAAVKRNTDIAVDEKGQRILV 184
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
D+ HR+ I D+ G ++++FG G E+G+ FP VA++ +G I VGD+ N R+QIF
Sbjct: 185 VDAREHRIAILDMQGGLLSAFGKRGIEDGEFNFPVAVAINHKGEIIVGDAMNARVQIFDQ 244
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
DG+FLR FG G G +F+ ++GVAV S +I V + + H++ +F
Sbjct: 245 DGKFLRKFGRRGDGPADFQIMKGVAVDSEDHIYVTEGKGHKLIIF 289
Score = 215 (80.7 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 62/230 (26%), Positives = 102/230 (44%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P + +I V+D+ + +F F + KA +
Sbjct: 124 FNTPVSVTGDSQGNIYVSDAEKGGILIFDR---FEVPRRFIDTKAAVKRNTDIAVDEKGQ 180
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
R++V D+ HR+ I D+ G + + FG G + G+ P +A+++ +IV D
Sbjct: 181 RILVVDAREHRIAILDMQGGLLSA-------FGKRGIEDGEFNFPVAVAINHKGEIIVGD 233
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ N RVQIFD +G+ + FG G + +GVAVD + +I V + +++ IF +G
Sbjct: 234 AMNARVQIFDQDGKFLRKFGRRGDGPADFQIMKGVAVDSEDHIYVTEGKGHKLIIFGTNG 293
Query: 277 QFLRAFGCWGSG-------DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++L G S G F +GV + I V D+ N R QVF
Sbjct: 294 EYLLTVGGLYSAITTGKQAPGGFVIPQGVFIDDKDVIYVVDQLNRRFQVF 343
Score = 139 (54.0 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 53/181 (29%), Positives = 77/181 (42%)
Query: 140 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE 199
+A L P + +R+ V+D V +F++ R V G A Q
Sbjct: 74 QAMSLTKPLDVYADGQDRIYVADPGLRGVVVFNMKERS-------VSMLGGP-QAANQFN 125
Query: 200 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY- 258
P + + + VSD+ + IFD V F + +K +AVD++G
Sbjct: 126 TPVSVTGDSQGNIYVSDAEKGGILIFD-RFEVPRRFIDT---KAAVKRNTDIAVDEKGQR 181
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
I V D+ +RI I G L AFG G DGEF VA+ G I+V D N R+Q+
Sbjct: 182 ILVVDAREHRIAILDMQGGLLSAFGKRGIEDGEFNFPVAVAINHKGEIIVGDAMNARVQI 241
Query: 319 F 319
F
Sbjct: 242 F 242
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 39/140 (27%), Positives = 65/140 (46%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-------LAFT 98
G RG E G F +P +A+ I+V D+ N RVQ+ F D K F F
Sbjct: 206 GKRGIEDGEFNFPVAVAINHKGEIIVGDAMNARVQI-FDQ-DGKFLRKFGRRGDGPADFQ 263
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM------GNKA-GQLEHPHYIA 151
+G+AV ++ I V + H++ +F ++G ++ G + G +A G P +
Sbjct: 264 IMKGVAVDSEDHIYVTEGKGHKLIIFGTNGEYLLTVGGLYSAITTGKQAPGGFVIPQGVF 323
Query: 152 VSNTNRVIVSDSNNHRVQIF 171
+ + + + V D N R Q+F
Sbjct: 324 IDDKDVIYVVDQLNRRFQVF 343
>TIGR_CMR|GSU_0617 [details] [associations]
symbol:GSU_0617 "NHL repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001258 Pfam:PF01436 Gene3D:2.120.10.30
InterPro:IPR011042 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR013017 PROSITE:PS51125 HOGENOM:HOG000275895
RefSeq:NP_951675.1 ProteinModelPortal:Q74FJ1 GeneID:2685411
KEGG:gsu:GSU0617 PATRIC:22023987 OMA:ERPRIEW ProtClustDB:CLSK827953
BioCyc:GSUL243231:GH27-610-MONOMER Uniprot:Q74FJ1
Length = 361
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 71/225 (31%), Positives = 110/225 (48%)
Query: 95 LAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
++ T P + + I VAD V VF V G A Q P + +
Sbjct: 76 MSLTKPLDVYADGQDRIYVADPGLRGVVVFNMKERSVSMLGGP-QAANQFNTPVSVTGDS 134
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+ VSD+ + IFD R F+ F+ KA + R++V
Sbjct: 135 QGNIYVSDAEKGGILIFD---R-FEVPRRFID------TKAAVKRNTDIAVDEKGQRILV 184
Query: 215 SDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
D+ HR+ I D+ G ++++FG G E+G+ FP VA++ +G I VGD+ N R+QIF
Sbjct: 185 VDAREHRIAILDMQGGLLSAFGKRGIEDGEFNFPVAVAINHKGEIIVGDAMNARVQIFDQ 244
Query: 275 DGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
DG+FLR FG G G +F+ ++GVAV S +I V + + H++ +F
Sbjct: 245 DGKFLRKFGRRGDGPADFQIMKGVAVDSEDHIYVTEGKGHKLIIF 289
Score = 215 (80.7 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 62/230 (26%), Positives = 102/230 (44%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
F P + +I V+D+ + +F F + KA +
Sbjct: 124 FNTPVSVTGDSQGNIYVSDAEKGGILIFDR---FEVPRRFIDTKAAVKRNTDIAVDEKGQ 180
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
R++V D+ HR+ I D+ G + + FG G + G+ P +A+++ +IV D
Sbjct: 181 RILVVDAREHRIAILDMQGGLLSA-------FGKRGIEDGEFNFPVAVAINHKGEIIVGD 233
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ N RVQIFD +G+ + FG G + +GVAVD + +I V + +++ IF +G
Sbjct: 234 AMNARVQIFDQDGKFLRKFGRRGDGPADFQIMKGVAVDSEDHIYVTEGKGHKLIIFGTNG 293
Query: 277 QFLRAFGCWGSG-------DGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
++L G S G F +GV + I V D+ N R QVF
Sbjct: 294 EYLLTVGGLYSAITTGKQAPGGFVIPQGVFIDDKDVIYVVDQLNRRFQVF 343
Score = 139 (54.0 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 53/181 (29%), Positives = 77/181 (42%)
Query: 140 KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE 199
+A L P + +R+ V+D V +F++ R V G A Q
Sbjct: 74 QAMSLTKPLDVYADGQDRIYVADPGLRGVVVFNMKERS-------VSMLGGP-QAANQFN 125
Query: 200 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGY- 258
P + + + VSD+ + IFD V F + +K +AVD++G
Sbjct: 126 TPVSVTGDSQGNIYVSDAEKGGILIFD-RFEVPRRFIDT---KAAVKRNTDIAVDEKGQR 181
Query: 259 ISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
I V D+ +RI I G L AFG G DGEF VA+ G I+V D N R+Q+
Sbjct: 182 ILVVDAREHRIAILDMQGGLLSAFGKRGIEDGEFNFPVAVAINHKGEIIVGDAMNARVQI 241
Query: 319 F 319
F
Sbjct: 242 F 242
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 39/140 (27%), Positives = 65/140 (46%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVF-------LAFT 98
G RG E G F +P +A+ I+V D+ N RVQ+ F D K F F
Sbjct: 206 GKRGIEDGEFNFPVAVAINHKGEIIVGDAMNARVQI-FDQ-DGKFLRKFGRRGDGPADFQ 263
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSM------GNKA-GQLEHPHYIA 151
+G+AV ++ I V + H++ +F ++G ++ G + G +A G P +
Sbjct: 264 IMKGVAVDSEDHIYVTEGKGHKLIIFGTNGEYLLTVGGLYSAITTGKQAPGGFVIPQGVF 323
Query: 152 VSNTNRVIVSDSNNHRVQIF 171
+ + + + V D N R Q+F
Sbjct: 324 IDDKDVIYVVDQLNRRFQVF 343
>UNIPROTKB|Q747P0 [details] [associations]
symbol:GSU3225 "NHL repeat domain lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001258 Pfam:PF01436 Gene3D:2.120.10.30
InterPro:IPR011042 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR013017 PROSITE:PS51125 RefSeq:NP_954266.1
ProteinModelPortal:Q747P0 GeneID:2687683 KEGG:gsu:GSU3225
PATRIC:22029301 HOGENOM:HOG000275895 OMA:RVQVFRY
ProtClustDB:CLSK829172 BioCyc:GSUL243231:GH27-3203-MONOMER
Uniprot:Q747P0
Length = 365
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 91/279 (32%), Positives = 129/279 (46%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------FTWPR 101
G + F P GI + + + DS RV + DLK L P
Sbjct: 89 GEKEERFIRPHGI-LADEQIFALVDSGAGRVHL----IDLKRGTYRLLPEEGKTPMVSPI 143
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIV 160
GIA +I V DS + F DG F ++ + L P IA + T + V
Sbjct: 144 GIARDSRGAIYVTDSGTGLIHRFSDDGD---SFVALDLRP--LHRPTGIAFNPVTGLLYV 198
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+++ HR+ FD G+ T + G G + G P +AV R++V+DS N
Sbjct: 199 AETGAHRIVAFDSAGKE-----TL--RIGGSGMEPGAFNFPTDLAVMADGRLLVTDSLNS 251
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+QIF +G+ SFG G G+ P+GVAVD +G+I V DS + +QIF G+ L
Sbjct: 252 RIQIFTADGKPAGSFGEAGDTPGRFTRPKGVAVDSEGHIYVCDSQQDMVQIFDETGRLLL 311
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
AFG GS G+F G+ + +N I V D N R+QVF
Sbjct: 312 AFGDKGSLPGQFWMPSGIHI-ANDMIYVSDTYNQRVQVF 349
Score = 194 (73.4 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 49/134 (36%), Positives = 68/134 (50%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------F 97
+IG G EPG F +P +AV D ++V DS N R+Q+ F A F
Sbjct: 218 RIGGSGMEPGAFNFPTDLAVMADGRLLVTDSLNSRIQI-FTADGKPAGSFGEAGDTPGRF 276
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
T P+G+AV + I V DS VQ+F G + FG G+ GQ P I ++N +
Sbjct: 277 TRPKGVAVDSEGHIYVCDSQQDMVQIFDETGRLLLAFGDKGSLPGQFWMPSGIHIAN-DM 335
Query: 158 VIVSDSNNHRVQIF 171
+ VSD+ N RVQ+F
Sbjct: 336 IYVSDTYNQRVQVF 349
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 36/90 (40%), Positives = 46/90 (51%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT------- 98
G G PG FT P+G+AV + I V DS VQ+ FD +T + LAF
Sbjct: 267 GEAGDTPGRFTRPKGVAVDSEGHIYVCDSQQDMVQI----FD-ETGRLLLAFGDKGSLPG 321
Query: 99 --W-PRGIAVGPDNSIVVADSSNHRVQVFQ 125
W P GI + D I V+D+ N RVQVF+
Sbjct: 322 QFWMPSGIHIAND-MIYVSDTYNQRVQVFR 350
>TIGR_CMR|GSU_3225 [details] [associations]
symbol:GSU_3225 "NHL repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001258 Pfam:PF01436 Gene3D:2.120.10.30
InterPro:IPR011042 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR013017 PROSITE:PS51125 RefSeq:NP_954266.1
ProteinModelPortal:Q747P0 GeneID:2687683 KEGG:gsu:GSU3225
PATRIC:22029301 HOGENOM:HOG000275895 OMA:RVQVFRY
ProtClustDB:CLSK829172 BioCyc:GSUL243231:GH27-3203-MONOMER
Uniprot:Q747P0
Length = 365
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 91/279 (32%), Positives = 129/279 (46%)
Query: 49 GSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA-------FTWPR 101
G + F P GI + + + DS RV + DLK L P
Sbjct: 89 GEKEERFIRPHGI-LADEQIFALVDSGAGRVHL----IDLKRGTYRLLPEEGKTPMVSPI 143
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIV 160
GIA +I V DS + F DG F ++ + L P IA + T + V
Sbjct: 144 GIARDSRGAIYVTDSGTGLIHRFSDDGD---SFVALDLRP--LHRPTGIAFNPVTGLLYV 198
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
+++ HR+ FD G+ T + G G + G P +AV R++V+DS N
Sbjct: 199 AETGAHRIVAFDSAGKE-----TL--RIGGSGMEPGAFNFPTDLAVMADGRLLVTDSLNS 251
Query: 221 RVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLR 280
R+QIF +G+ SFG G G+ P+GVAVD +G+I V DS + +QIF G+ L
Sbjct: 252 RIQIFTADGKPAGSFGEAGDTPGRFTRPKGVAVDSEGHIYVCDSQQDMVQIFDETGRLLL 311
Query: 281 AFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
AFG GS G+F G+ + +N I V D N R+QVF
Sbjct: 312 AFGDKGSLPGQFWMPSGIHI-ANDMIYVSDTYNQRVQVF 349
Score = 194 (73.4 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 49/134 (36%), Positives = 68/134 (50%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA------F 97
+IG G EPG F +P +AV D ++V DS N R+Q+ F A F
Sbjct: 218 RIGGSGMEPGAFNFPTDLAVMADGRLLVTDSLNSRIQI-FTADGKPAGSFGEAGDTPGRF 276
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
T P+G+AV + I V DS VQ+F G + FG G+ GQ P I ++N +
Sbjct: 277 TRPKGVAVDSEGHIYVCDSQQDMVQIFDETGRLLLAFGDKGSLPGQFWMPSGIHIAN-DM 335
Query: 158 VIVSDSNNHRVQIF 171
+ VSD+ N RVQ+F
Sbjct: 336 IYVSDTYNQRVQVF 349
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 36/90 (40%), Positives = 46/90 (51%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT------- 98
G G PG FT P+G+AV + I V DS VQ+ FD +T + LAF
Sbjct: 267 GEAGDTPGRFTRPKGVAVDSEGHIYVCDSQQDMVQI----FD-ETGRLLLAFGDKGSLPG 321
Query: 99 --W-PRGIAVGPDNSIVVADSSNHRVQVFQ 125
W P GI + D I V+D+ N RVQVF+
Sbjct: 322 QFWMPSGIHIAND-MIYVSDTYNQRVQVFR 350
>UNIPROTKB|H9L198 [details] [associations]
symbol:H9L198 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000315
InterPro:IPR001258 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50119
SMART:SM00336 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013017 PROSITE:PS51125 GeneTree:ENSGT00550000074377
EMBL:AADN02068560 EMBL:AADN02068561 EMBL:AADN02068562
Ensembl:ENSGALT00000029931 OMA:GTAERQF Uniprot:H9L198
Length = 607
Score = 266 (98.7 bits), Expect = 3.5e-22, P = 3.5e-22
Identities = 65/186 (34%), Positives = 100/186 (53%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG 192
+ GS G + G+ + I+ S+T R++V+DSNN VQ VF ++G F +FG G
Sbjct: 434 RVGSRGREKGEFTNLQGISTSSTGRIVVADSNNQCVQ-------VFSNEGQFRLRFGVRG 486
Query: 193 NKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA 252
GQL+ P + V +I++D +N V IF G+ T G+ G+L P+GVA
Sbjct: 487 RSPGQLQRPTGVTVDMNGDIIIADYDNRWVSIFSPEGKFKTKIGA-----GRLLGPKGVA 541
Query: 253 VDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRE 312
VD G+I V D+ + IF +G+ + FG G+ + +F G VAV + I+V D
Sbjct: 542 VDRNGHIIVVDNKACCVFIFQSNGKLVTKFGSRGTAERQFAGPHFVAVNNKNEIVVTDFH 601
Query: 313 NHRIQV 318
NH ++V
Sbjct: 602 NHSVKV 607
Score = 262 (97.3 bits), Expect = 9.6e-22, P = 9.6e-22
Identities = 71/190 (37%), Positives = 100/190 (52%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH---FDLKTNCVFLA- 96
L F++GSRG E G FT +GI+ IVVADS+N VQV F + F L+ +
Sbjct: 431 LIFRVGSRGREKGEFTNLQGISTSSTGRIVVADSNNQCVQV-FSNEGQFRLRFGVRGRSP 489
Query: 97 --FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 154
P G+ V + I++AD N V +F +G F K G AG+L P +AV
Sbjct: 490 GQLQRPTGVTVDMNGDIIIADYDNRWVSIFSPEGKFKTKIG-----AGRLLGPKGVAVDR 544
Query: 155 TNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 214
+IV D N +F +FQS+G V KFGS G Q PH++AV+N N ++V
Sbjct: 545 NGHIIVVD--NKACCVF-----IFQSNGKLVTKFGSRGTAERQFAGPHFVAVNNKNEIVV 597
Query: 215 SDSNNHRVQI 224
+D +NH V++
Sbjct: 598 TDFHNHSVKV 607
Score = 247 (92.0 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 64/175 (36%), Positives = 92/175 (52%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
FT +GI+ IVVADS+N VQVF ++G F +FG G GQL+ P + V
Sbjct: 445 FTNLQGISTSSTGRIVVADSNNQCVQVFSNEGQFRLRFGVRGRSPGQLQRPTGVTVDMNG 504
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
+I++D +N V IF G+ F K G AG+L P +AV +IV D
Sbjct: 505 DIIIADYDNRWVSIFSPEGK-------FKTKIG-----AGRLLGPKGVAVDRNGHIIVVD 552
Query: 217 SNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
+ V IF NG+++T FGS G+ E Q P VAV+++ I V D N+ +++
Sbjct: 553 NKACCVFIFQSNGKLVTKFGSRGTAERQFAGPHFVAVNNKNEIVVTDFHNHSVKV 607
Score = 228 (85.3 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 54/160 (33%), Positives = 82/160 (51%)
Query: 16 LQTLLVSGIGQVGTTP-RSQYLQ--KRRLQFKI--GSRGSEPGCFTWPRGIAVGPDNSIV 70
LQ + S G++ +Q +Q QF++ G RG PG P G+ V + I+
Sbjct: 448 LQGISTSSTGRIVVADSNNQCVQVFSNEGQFRLRFGVRGRSPGQLQRPTGVTVDMNGDII 507
Query: 71 VADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTF 130
+AD N V + P KT P+G+AV + I+V D+ V +FQS+G
Sbjct: 508 IADYDNRWVSIFSPEGKFKTKIGAGRLLGPKGVAVDRNGHIIVVDNKACCVFIFQSNGKL 567
Query: 131 VGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
V KFGS G Q PH++AV+N N ++V+D +NH V++
Sbjct: 568 VTKFGSRGTAERQFAGPHFVAVNNKNEIVVTDFHNHSVKV 607
Score = 221 (82.9 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 50/133 (37%), Positives = 73/133 (54%)
Query: 187 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLK 246
+ GS G + G+ + I+ S+T R++V+DSNN VQ+F G+ FG G GQL+
Sbjct: 434 RVGSRGREKGEFTNLQGISTSSTGRIVVADSNNQCVQVFSNEGQFRLRFGVRGRSPGQLQ 493
Query: 247 FPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNI 306
P GV VD G I + D N + IF+P+G+F G G G +GVAV NG+I
Sbjct: 494 RPTGVTVDMNGDIIIADYDNRWVSIFSPEGKFKTKIGA-----GRLLGPKGVAVDRNGHI 548
Query: 307 LVCDRENHRIQVF 319
+V D + + +F
Sbjct: 549 IVVDNKACCVFIF 561
Score = 156 (60.0 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 31/93 (33%), Positives = 50/93 (53%)
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ +I GS G E+G+ +G++ G I V DS N +Q+F+ +GQF FG G
Sbjct: 427 IEDELIFRVGSRGREKGEFTNLQGISTSSTGRIVVADSNNQCVQVFSNEGQFRLRFGVRG 486
Query: 287 SGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + GV V NG+I++ D +N + +F
Sbjct: 487 RSPGQLQRPTGVTVDMNGDIIIADYDNRWVSIF 519
>UNIPROTKB|Q3Z6H7 [details] [associations]
symbol:DET1472 "NHL/RHS/YD repeat protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001258 Pfam:PF01436 Gene3D:2.120.10.30
InterPro:IPR011042 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR006530
TIGRFAMs:TIGR01643 InterPro:IPR022385 TIGRFAMs:TIGR03696
Pfam:PF05593 eggNOG:COG3209 RefSeq:YP_182172.1
ProteinModelPortal:Q3Z6H7 STRING:Q3Z6H7 GeneID:3229306
KEGG:det:DET1472 PATRIC:21609970 OMA:SLNQPQG
BioCyc:DETH243164:GJNF-1473-MONOMER Uniprot:Q3Z6H7
Length = 1834
Score = 226 (84.6 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 74/270 (27%), Positives = 132/270 (48%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSS 117
P +A+G D I VAD++ + ++ P+ L ++ + P+G+A D ++V++++
Sbjct: 508 PNAVAIGQDGYIYVADTNANLIRKYNPNGILMSS-FGNSLNQPQGLAFTYDGYLLVSNTN 566
Query: 118 NHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 177
+ +Q + DGTFV N L P I V+ + V+++ + V+I+ G +
Sbjct: 567 ANTIQKYTIDGTFVS------NLITGLTRPQGITVAKGGNIYVANTGANNVKIYTATGSL 620
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD-VNGRVIT--S 234
T + + +MG ++ L P +AV+N N + V+D+ N+R+ I+ VN ++ S
Sbjct: 621 VN---TIL--YWNMGTQS--LNQPQGVAVTNDNILFVADTGNNRIHIYSTVNSPTVSFAS 673
Query: 235 FGSEGSEEGQLKF--PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
F + F P+G+ GY+ V D+GNN + + P G + W S G
Sbjct: 674 FNTYKFNGVDTAFNGPQGLFYSQTGYLYVADTGNNLVHEYIP-GTGMTDIPEWVSNIGS- 731
Query: 293 KGL---EGVAVMSNGNILVCDRENHRIQVF 319
GL + VAV NG I V D ++ I +
Sbjct: 732 -GLNQPQSVAVAPNGYIYVTDTGDNEIHKY 760
Score = 196 (74.1 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 71/262 (27%), Positives = 123/262 (46%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSS 117
P+G+A D ++V++++ + +Q +N + T P+GI V +I VA++
Sbjct: 549 PQGLAFTYDGYLLVSNTNANTIQKYTIDGTFVSNLI-TGLTRPQGITVAKGGNIYVANTG 607
Query: 118 NHRVQVFQSDGTFVGK--FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD-VN 174
+ V+++ + G+ V + +MG ++ L P +AV+N N + V+D+ N+R+ I+ VN
Sbjct: 608 ANNVKIYTATGSLVNTILYWNMGTQS--LNQPQGVAVTNDNILFVADTGNNRIHIYSTVN 665
Query: 175 GRV--FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
F S T+ KF + P + S T + V+D+ N+ V + + G +
Sbjct: 666 SPTVSFASFNTY--KFNGVDTA---FNGPQGLFYSQTGYLYVADTGNNLVHEY-IPGTGM 719
Query: 233 TSFGSEGSEEGQ-LKFPRGVAVDDQGYISVGDSGNNRIQIF--TPDGQFLR----AFGCW 285
T S G L P+ VAV GYI V D+G+N I + T +R G
Sbjct: 720 TDIPEWVSNIGSGLNQPQSVAVAPNGYIYVTDTGDNEIHKYEYTIRTWIIRLVKYTIGYS 779
Query: 286 GSGDGEFKGLEGVAVMSNGNIL 307
G+G E S GN++
Sbjct: 780 GTGGSNHYNQERYEYDSYGNVI 801
Score = 149 (57.5 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 45/173 (26%), Positives = 83/173 (47%)
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNG---RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
+++N N V + + + D N R + +G + FG+ L P +A +
Sbjct: 504 SLNNPNAVAIGQDGY--IYVADTNANLIRKYNPNGILMSSFGN------SLNQPQGLAFT 555
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
++VS++N + +Q + ++G +++ + G L P+G+ V G I V ++G N
Sbjct: 556 YDGYLLVSNTNANTIQKYTIDGTFVSNLIT-----G-LTRPQGITVAKGGNIYVANTGAN 609
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL-VCDRENHRIQVF 319
++I+T G + W G +GVAV +N NIL V D N+RI ++
Sbjct: 610 NVKIYTATGSLVNTILYWNMGTQSLNQPQGVAV-TNDNILFVADTGNNRIHIY 661
Score = 132 (51.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 189 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFP 248
G + N L +P+ +A+ + V+D+N + ++ ++ NG +++SFG+ L P
Sbjct: 496 GVLSNTISSLNNPNAVAIGQDGYIYVADTNANLIRKYNPNGILMSSFGNS------LNQP 549
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
+G+A GY+ V ++ N IQ +T DG F+ +G +G+ V GNI V
Sbjct: 550 QGLAFTYDGYLLVSNTNANTIQKYTIDGTFVSNLI---TG---LTRPQGITVAKGGNIYV 603
Query: 309 CDRENHRIQVF 319
+ + ++++
Sbjct: 604 ANTGANNVKIY 614
>TIGR_CMR|DET_1472 [details] [associations]
symbol:DET_1472 "NHL/RHS/YD repeat protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001258 Pfam:PF01436 Gene3D:2.120.10.30
InterPro:IPR011042 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR006530
TIGRFAMs:TIGR01643 InterPro:IPR022385 TIGRFAMs:TIGR03696
Pfam:PF05593 eggNOG:COG3209 RefSeq:YP_182172.1
ProteinModelPortal:Q3Z6H7 STRING:Q3Z6H7 GeneID:3229306
KEGG:det:DET1472 PATRIC:21609970 OMA:SLNQPQG
BioCyc:DETH243164:GJNF-1473-MONOMER Uniprot:Q3Z6H7
Length = 1834
Score = 226 (84.6 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 74/270 (27%), Positives = 132/270 (48%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSS 117
P +A+G D I VAD++ + ++ P+ L ++ + P+G+A D ++V++++
Sbjct: 508 PNAVAIGQDGYIYVADTNANLIRKYNPNGILMSS-FGNSLNQPQGLAFTYDGYLLVSNTN 566
Query: 118 NHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 177
+ +Q + DGTFV N L P I V+ + V+++ + V+I+ G +
Sbjct: 567 ANTIQKYTIDGTFVS------NLITGLTRPQGITVAKGGNIYVANTGANNVKIYTATGSL 620
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD-VNGRVIT--S 234
T + + +MG ++ L P +AV+N N + V+D+ N+R+ I+ VN ++ S
Sbjct: 621 VN---TIL--YWNMGTQS--LNQPQGVAVTNDNILFVADTGNNRIHIYSTVNSPTVSFAS 673
Query: 235 FGSEGSEEGQLKF--PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
F + F P+G+ GY+ V D+GNN + + P G + W S G
Sbjct: 674 FNTYKFNGVDTAFNGPQGLFYSQTGYLYVADTGNNLVHEYIP-GTGMTDIPEWVSNIGS- 731
Query: 293 KGL---EGVAVMSNGNILVCDRENHRIQVF 319
GL + VAV NG I V D ++ I +
Sbjct: 732 -GLNQPQSVAVAPNGYIYVTDTGDNEIHKY 760
Score = 196 (74.1 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 71/262 (27%), Positives = 123/262 (46%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSS 117
P+G+A D ++V++++ + +Q +N + T P+GI V +I VA++
Sbjct: 549 PQGLAFTYDGYLLVSNTNANTIQKYTIDGTFVSNLI-TGLTRPQGITVAKGGNIYVANTG 607
Query: 118 NHRVQVFQSDGTFVGK--FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD-VN 174
+ V+++ + G+ V + +MG ++ L P +AV+N N + V+D+ N+R+ I+ VN
Sbjct: 608 ANNVKIYTATGSLVNTILYWNMGTQS--LNQPQGVAVTNDNILFVADTGNNRIHIYSTVN 665
Query: 175 GRV--FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVI 232
F S T+ KF + P + S T + V+D+ N+ V + + G +
Sbjct: 666 SPTVSFASFNTY--KFNGVDTA---FNGPQGLFYSQTGYLYVADTGNNLVHEY-IPGTGM 719
Query: 233 TSFGSEGSEEGQ-LKFPRGVAVDDQGYISVGDSGNNRIQIF--TPDGQFLR----AFGCW 285
T S G L P+ VAV GYI V D+G+N I + T +R G
Sbjct: 720 TDIPEWVSNIGSGLNQPQSVAVAPNGYIYVTDTGDNEIHKYEYTIRTWIIRLVKYTIGYS 779
Query: 286 GSGDGEFKGLEGVAVMSNGNIL 307
G+G E S GN++
Sbjct: 780 GTGGSNHYNQERYEYDSYGNVI 801
Score = 149 (57.5 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 45/173 (26%), Positives = 83/173 (47%)
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNG---RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
+++N N V + + + D N R + +G + FG+ L P +A +
Sbjct: 504 SLNNPNAVAIGQDGY--IYVADTNANLIRKYNPNGILMSSFGN------SLNQPQGLAFT 555
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
++VS++N + +Q + ++G +++ + G L P+G+ V G I V ++G N
Sbjct: 556 YDGYLLVSNTNANTIQKYTIDGTFVSNLIT-----G-LTRPQGITVAKGGNIYVANTGAN 609
Query: 268 RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL-VCDRENHRIQVF 319
++I+T G + W G +GVAV +N NIL V D N+RI ++
Sbjct: 610 NVKIYTATGSLVNTILYWNMGTQSLNQPQGVAV-TNDNILFVADTGNNRIHIY 661
Score = 132 (51.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 189 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFP 248
G + N L +P+ +A+ + V+D+N + ++ ++ NG +++SFG+ L P
Sbjct: 496 GVLSNTISSLNNPNAVAIGQDGYIYVADTNANLIRKYNPNGILMSSFGNS------LNQP 549
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
+G+A GY+ V ++ N IQ +T DG F+ +G +G+ V GNI V
Sbjct: 550 QGLAFTYDGYLLVSNTNANTIQKYTIDGTFVSNLI---TG---LTRPQGITVAKGGNIYV 603
Query: 309 CDRENHRIQVF 319
+ + ++++
Sbjct: 604 ANTGANNVKIY 614
>UNIPROTKB|Q747P3 [details] [associations]
symbol:GSU3222 "NHL repeat domain lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Gene3D:2.120.10.30 InterPro:IPR011042 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR013017 PROSITE:PS51125
RefSeq:NP_954263.1 ProteinModelPortal:Q747P3 GeneID:2688295
KEGG:gsu:GSU3222 PATRIC:22029295 HOGENOM:HOG000275897 OMA:KFDRDGH
ProtClustDB:CLSK829169 BioCyc:GSUL243231:GH27-3200-MONOMER
InterPro:IPR010620 Pfam:PF06739 Uniprot:Q747P3
Length = 412
Score = 215 (80.7 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 61/209 (29%), Positives = 98/209 (46%)
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
T P +AV D I VAD+ V VF +G F+ G G++ + P + VS +R
Sbjct: 132 TTPANVAVDKDGFIYVADAGRREVVVFTPEGDFLKAIG--GDRDMK---PVDVVVSG-DR 185
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
V D + +++F+V G ++ FG+ G +L P +A+ + + ++
Sbjct: 186 AFVLDIKSSDIKVFNVKS------GQYLESFGTAGGPFERLAMPINLAMDSKGFLYATNG 239
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
+ RV FD +G ++ SFG G GQ P+G+AVD G I V D G+ +Q+F+ G+
Sbjct: 240 VSGRVLKFDRDGNLLLSFGQMGDGFGQFARPKGIAVDPTGLIHVVDGGHQNVQLFSDTGR 299
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNI 306
L +G G L S N+
Sbjct: 300 LLLFYGDAGKDSTASLNLPAGIAYSTANL 328
Score = 198 (74.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 60/213 (28%), Positives = 93/213 (43%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPR 101
+F++ + PG T P +AV D I VAD+ V V P D P
Sbjct: 118 KFELLKGAAGPGKLTTPANVAVDKDGFIYVADAGRREVVVFTPEGDFLKAIGGDRDMKPV 177
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQ-SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
+ V D + V+ D + ++VF G ++ FG+ G +L P +A+ + +
Sbjct: 178 DVVVSGDRAFVL-DIKSSDIKVFNVKSGQYLESFGTAGGPFERLAMPINLAMDSKGFLYA 236
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
++ + RV FD DG + FG MG+ GQ P IAV T + V D +
Sbjct: 237 TNGVSGRVLKFD-------RDGNLLLSFGQMGDGFGQFARPKGIAVDPTGLIHVVDGGHQ 289
Query: 221 RVQIFDVNGRVITSFGSEGSEE-GQLKFPRGVA 252
VQ+F GR++ +G G + L P G+A
Sbjct: 290 NVQLFSDTGRLLLFYGDAGKDSTASLNLPAGIA 322
Score = 182 (69.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 62/223 (27%), Positives = 104/223 (46%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG--QLEHPHYIAVSNTNR 157
P GI + V+D ++ V G KF + AG +L P +AV
Sbjct: 89 PYGITEA-GGKLYVSDVGTAQIVVIDLPGK---KFELLKGAAGPGKLTTPANVAVDKDGF 144
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
+ V+D+ V VF +G F+ G G++ + P + VS +R V D
Sbjct: 145 IYVADAGRREVV-------VFTPEGDFLKAIG--GDRDMK---PVDVVVSG-DRAFVLDI 191
Query: 218 NNHRVQIFDV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ +++F+V +G+ + SFG+ G +L P +A+D +G++ + + R+ F DG
Sbjct: 192 KSSDIKVFNVKSGQYLESFGTAGGPFERLAMPINLAMDSKGFLYATNGVSGRVLKFDRDG 251
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L +FG G G G+F +G+AV G I V D + +Q+F
Sbjct: 252 NLLLSFGQMGDGFGQFARPKGIAVDPTGLIHVVDGGHQNVQLF 294
Score = 114 (45.2 bits), Expect = 0.00078, P = 0.00077
Identities = 35/117 (29%), Positives = 47/117 (40%)
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F P +A+ + + + RV F DG + FG MG+ GQ P IAV
Sbjct: 217 FERLAMPINLAMDSKGFLYATNGVSGRVLKFDRDGNLLLSFGQMGDGFGQFARPKGIAVD 276
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
T + V D + VQ+F GR+ F G G + L P IA S N
Sbjct: 277 PTGLIHVVDGGHQNVQLFSDTGRLL----LFYGDAGK--DSTASLNLPAGIAYSTAN 327
>TIGR_CMR|GSU_3222 [details] [associations]
symbol:GSU_3222 "NHL repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Gene3D:2.120.10.30 InterPro:IPR011042 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR013017 PROSITE:PS51125
RefSeq:NP_954263.1 ProteinModelPortal:Q747P3 GeneID:2688295
KEGG:gsu:GSU3222 PATRIC:22029295 HOGENOM:HOG000275897 OMA:KFDRDGH
ProtClustDB:CLSK829169 BioCyc:GSUL243231:GH27-3200-MONOMER
InterPro:IPR010620 Pfam:PF06739 Uniprot:Q747P3
Length = 412
Score = 215 (80.7 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 61/209 (29%), Positives = 98/209 (46%)
Query: 98 TWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 157
T P +AV D I VAD+ V VF +G F+ G G++ + P + VS +R
Sbjct: 132 TTPANVAVDKDGFIYVADAGRREVVVFTPEGDFLKAIG--GDRDMK---PVDVVVSG-DR 185
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
V D + +++F+V G ++ FG+ G +L P +A+ + + ++
Sbjct: 186 AFVLDIKSSDIKVFNVKS------GQYLESFGTAGGPFERLAMPINLAMDSKGFLYATNG 239
Query: 218 NNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ 277
+ RV FD +G ++ SFG G GQ P+G+AVD G I V D G+ +Q+F+ G+
Sbjct: 240 VSGRVLKFDRDGNLLLSFGQMGDGFGQFARPKGIAVDPTGLIHVVDGGHQNVQLFSDTGR 299
Query: 278 FLRAFGCWGSGDGEFKGLEGVAVMSNGNI 306
L +G G L S N+
Sbjct: 300 LLLFYGDAGKDSTASLNLPAGIAYSTANL 328
Score = 198 (74.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 60/213 (28%), Positives = 93/213 (43%)
Query: 42 QFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPR 101
+F++ + PG T P +AV D I VAD+ V V P D P
Sbjct: 118 KFELLKGAAGPGKLTTPANVAVDKDGFIYVADAGRREVVVFTPEGDFLKAIGGDRDMKPV 177
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQ-SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV 160
+ V D + V+ D + ++VF G ++ FG+ G +L P +A+ + +
Sbjct: 178 DVVVSGDRAFVL-DIKSSDIKVFNVKSGQYLESFGTAGGPFERLAMPINLAMDSKGFLYA 236
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 220
++ + RV FD DG + FG MG+ GQ P IAV T + V D +
Sbjct: 237 TNGVSGRVLKFD-------RDGNLLLSFGQMGDGFGQFARPKGIAVDPTGLIHVVDGGHQ 289
Query: 221 RVQIFDVNGRVITSFGSEGSEE-GQLKFPRGVA 252
VQ+F GR++ +G G + L P G+A
Sbjct: 290 NVQLFSDTGRLLLFYGDAGKDSTASLNLPAGIA 322
Score = 182 (69.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 62/223 (27%), Positives = 104/223 (46%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAG--QLEHPHYIAVSNTNR 157
P GI + V+D ++ V G KF + AG +L P +AV
Sbjct: 89 PYGITEA-GGKLYVSDVGTAQIVVIDLPGK---KFELLKGAAGPGKLTTPANVAVDKDGF 144
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
+ V+D+ V VF +G F+ G G++ + P + VS +R V D
Sbjct: 145 IYVADAGRREVV-------VFTPEGDFLKAIG--GDRDMK---PVDVVVSG-DRAFVLDI 191
Query: 218 NNHRVQIFDV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
+ +++F+V +G+ + SFG+ G +L P +A+D +G++ + + R+ F DG
Sbjct: 192 KSSDIKVFNVKSGQYLESFGTAGGPFERLAMPINLAMDSKGFLYATNGVSGRVLKFDRDG 251
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
L +FG G G G+F +G+AV G I V D + +Q+F
Sbjct: 252 NLLLSFGQMGDGFGQFARPKGIAVDPTGLIHVVDGGHQNVQLF 294
Score = 114 (45.2 bits), Expect = 0.00078, P = 0.00077
Identities = 35/117 (29%), Positives = 47/117 (40%)
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F P +A+ + + + RV F DG + FG MG+ GQ P IAV
Sbjct: 217 FERLAMPINLAMDSKGFLYATNGVSGRVLKFDRDGNLLLSFGQMGDGFGQFARPKGIAVD 276
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
T + V D + VQ+F GR+ F G G + L P IA S N
Sbjct: 277 PTGLIHVVDGGHQNVQLFSDTGRLL----LFYGDAGK--DSTASLNLPAGIAYSTAN 327
>FB|FBgn0026206 [details] [associations]
symbol:mei-P26 "mei-P26" species:7227 "Drosophila
melanogaster" [GO:0007281 "germ cell development" evidence=IGI]
[GO:0007276 "gamete generation" evidence=IMP] [GO:0007126 "meiosis"
evidence=IMP] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR003649
Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 SMART:SM00502 Prosite:PS00518
GO:GO:0007126 GO:GO:0046872 EMBL:AE014298 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622 GO:GO:0007281
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR013017
PROSITE:PS51125 InterPro:IPR017907 GeneTree:ENSGT00550000074377
HSSP:Q8MQJ9 OMA:PMQIRCK EMBL:BT025212 RefSeq:NP_652022.1
UniGene:Dm.3139 SMR:Q9W378 IntAct:Q9W378 MINT:MINT-1617617
STRING:Q9W378 EnsemblMetazoa:FBtr0071303 EnsemblMetazoa:FBtr0333473
EnsemblMetazoa:FBtr0333475 GeneID:45775 KEGG:dme:Dmel_CG12218
UCSC:CG12218-RA CTD:45775 FlyBase:FBgn0026206 InParanoid:Q9W378
OrthoDB:EOG41JWT2 GenomeRNAi:45775 NextBio:838320 Uniprot:Q9W378
Length = 1189
Score = 212 (79.7 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 58/191 (30%), Positives = 92/191 (48%)
Query: 133 KFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV-FQSDGTFVGKFGSM 191
KFGS+G GQ PH + +IV+D+NNHR+++FD G + FQ FG
Sbjct: 922 KFGSLGTAKGQFNSPHGFCLGVDEEIIVADTNNHRIEVFDKMGALKFQ--------FGVA 973
Query: 192 GNKAGQLEHPHYIAVSNTN-RVIVSDSNNHR--VQIFDVNGRVITSFGSEGSEEGQLKFP 248
G + GQL +P +AV + N + +V D N R +QIF G + +
Sbjct: 974 GKEEGQLWYPRKVAVMHNNGKFVVCDRGNERSRMQIFSKCGHFMRKIAIR-----YIDIV 1028
Query: 249 RGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
G+AV +G+I DS + + + + +G+ +R F C + +A+ N + V
Sbjct: 1029 AGLAVTAKGHIVAVDSVSPTVFVISEEGELVRWFDC----SDYMREPSDIAIRDN-DFYV 1083
Query: 309 CDRENHRIQVF 319
CD + H + VF
Sbjct: 1084 CDFKGHCVAVF 1094
Score = 195 (73.7 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 79/294 (26%), Positives = 126/294 (42%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAF-- 97
+++ K GS G+ G F P G +G D I+VAD++NHR++V FD K + F
Sbjct: 918 QIRCKFGSLGTAKGQFNSPHGFCLGVDEEIIVADTNNHRIEV----FD-KMGALKFQFGV 972
Query: 98 -------TW-PRGIAVGPDNS-IVVADSSNHR--VQVFQSDGTFVGKFGSMGNKAGQLEH 146
W PR +AV +N VV D N R +Q+F G F+ K ++
Sbjct: 973 AGKEEGQLWYPRKVAVMHNNGKFVVCDRGNERSRMQIFSKCGHFMRKIAIR-----YIDI 1027
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
+AV+ ++ DS + V F V +G V F + + P IA+
Sbjct: 1028 VAGLAVTAKGHIVAVDSVSPTV--F-----VISEEGELVRWFDC----SDYMREPSDIAI 1076
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
+ N V D H V +F +G + G+E FP G+ + + G + +GDS
Sbjct: 1077 RD-NDFYVCDFKGHCVAVFQDDGTFLYRIGNEKVT----CFPNGIDISNAGDVLIGDSHG 1131
Query: 267 NRIQI--FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQV 318
NR + ++ +G F C GL+ + S G ++ + NH + V
Sbjct: 1132 NRFHVACYSREGALQSEFECPHVKVSRCCGLK---ITSEGYVVTLAKNNHHVLV 1182
>UNIPROTKB|Q748T7 [details] [associations]
symbol:GSU2914 "NHL repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016134 GO:GO:0000272 Gene3D:2.120.10.30
InterPro:IPR011042 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR013658 Pfam:PF08450
Gene3D:1.10.1330.10 SUPFAM:SSF63446 InterPro:IPR022038 Pfam:PF12245
RefSeq:NP_953956.1 ProteinModelPortal:Q748T7 GeneID:2688560
KEGG:gsu:GSU2914 PATRIC:22028687 HOGENOM:HOG000276039 OMA:IGPLYQG
ProtClustDB:CLSK828987 BioCyc:GSUL243231:GH27-2909-MONOMER
Uniprot:Q748T7
Length = 898
Score = 196 (74.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 53/151 (35%), Positives = 82/151 (54%)
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
+AV++ +IVS N V I D G V G +G AGQ + + IAV +T
Sbjct: 91 VAVASDGSLIVSQGNG--VVIVDGAGSVT----------GQLGIGAGQFKMANGIAVDDT 138
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG-YISVGDSGNNR 268
+ V DS ++ VQ+F+ G + FG+ G+ GQ P G+A + + +++V D+ N R
Sbjct: 139 GYIYVVDSLDNCVQVFNPAGGFVRRFGTFGAAAGQFSTPTGIAFEKRARHLAVVDTRNGR 198
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVA 299
IQ F +G F+R+ G +GSG +F +GVA
Sbjct: 199 IQFFDTNGTFVRSIGAFGSGPLKFTAPQGVA 229
Score = 189 (71.6 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 48/117 (41%), Positives = 63/117 (53%)
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
+AV++ +IVS N V I D G V G G GQ K G+AVDD GYI V D
Sbjct: 91 VAVASDGSLIVSQGNG--VVIVDGAGSVT---GQLGIGAGQFKMANGIAVDDTGYIYVVD 145
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNG-NILVCDRENHRIQVF 319
S +N +Q+F P G F+R FG +G+ G+F G+A ++ V D N RIQ F
Sbjct: 146 SLDNCVQVFNPAGGFVRRFGTFGAAAGQFSTPTGIAFEKRARHLAVVDTRNGRIQFF 202
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 66/229 (28%), Positives = 101/229 (44%)
Query: 59 RGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSN 118
+G+AV D S++V+ + + + F GIAV I V DS +
Sbjct: 89 QGVAVASDGSLIVSQGNGVVIVDGAGSVTGQLGIGAGQFKMANGIAVDDTGYIYVVDSLD 148
Query: 119 HRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR-VIVSDSNNHRVQIFDVNGRV 177
+ VQVF G FV +FG+ G AGQ P IA R + V D+ N R+Q FD NG
Sbjct: 149 NCVQVFNPAGGFVRRFGTFGAAAGQFSTPTGIAFEKRARHLAVVDTRNGRIQFFDTNG-- 206
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-------RVIVSDSNNHRVQIFDVNG- 229
TFV G+ G+ + P +A +N R+ V D+ +VQ+ +
Sbjct: 207 -----TFVRSIGAFGSGPLKFTAPQGVAFEYSNDPTPVLKRMYVVDTFQGQVQVVEPAAV 261
Query: 230 RVITSF-GSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIFTPDG 276
V ++ G G+ G+L P + D G + V + G + ++ DG
Sbjct: 262 PVFLAYIGGYGTTNGKLMVPSDLRFDQANGRLLVVN-GYGNLTVYGIDG 309
Score = 127 (49.8 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 52/198 (26%), Positives = 83/198 (41%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH--FDLKTNCVFLA---FTWP 100
G G G F GIAV I V DS ++ VQV P F + A F+ P
Sbjct: 118 GQLGIGAGQFKMANGIAVDDTGYIYVVDSLDNCVQVFNPAGGFVRRFGTFGAAAGQFSTP 177
Query: 101 RGIAVGPD-NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
GIA + V D+ N R+Q F ++GTFV G+ G+ + P +A +N
Sbjct: 178 TGIAFEKRARHLAVVDTRNGRIQFFDTNGTFVRSIGAFGSGPLKFTAPQGVAFEYSNDPT 237
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGT--FVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSD 216
+ V F +V + F+ G G G+L P + N R++V +
Sbjct: 238 PVLKRMYVVDTFQGQVQVVEPAAVPVFLAYIGGYGTTNGKLMVPSDLRFDQANGRLLVVN 297
Query: 217 SNNHRVQIFDVNGRVITS 234
+ + ++ ++G +T+
Sbjct: 298 GYGN-LTVYGIDGGGLTT 314
>TIGR_CMR|GSU_2914 [details] [associations]
symbol:GSU_2914 "NHL repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016134 GO:GO:0000272 Gene3D:2.120.10.30
InterPro:IPR011042 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR013658 Pfam:PF08450
Gene3D:1.10.1330.10 SUPFAM:SSF63446 InterPro:IPR022038 Pfam:PF12245
RefSeq:NP_953956.1 ProteinModelPortal:Q748T7 GeneID:2688560
KEGG:gsu:GSU2914 PATRIC:22028687 HOGENOM:HOG000276039 OMA:IGPLYQG
ProtClustDB:CLSK828987 BioCyc:GSUL243231:GH27-2909-MONOMER
Uniprot:Q748T7
Length = 898
Score = 196 (74.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 53/151 (35%), Positives = 82/151 (54%)
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
+AV++ +IVS N V I D G V G +G AGQ + + IAV +T
Sbjct: 91 VAVASDGSLIVSQGNG--VVIVDGAGSVT----------GQLGIGAGQFKMANGIAVDDT 138
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQG-YISVGDSGNNR 268
+ V DS ++ VQ+F+ G + FG+ G+ GQ P G+A + + +++V D+ N R
Sbjct: 139 GYIYVVDSLDNCVQVFNPAGGFVRRFGTFGAAAGQFSTPTGIAFEKRARHLAVVDTRNGR 198
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVA 299
IQ F +G F+R+ G +GSG +F +GVA
Sbjct: 199 IQFFDTNGTFVRSIGAFGSGPLKFTAPQGVA 229
Score = 189 (71.6 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 48/117 (41%), Positives = 63/117 (53%)
Query: 204 IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGD 263
+AV++ +IVS N V I D G V G G GQ K G+AVDD GYI V D
Sbjct: 91 VAVASDGSLIVSQGNG--VVIVDGAGSVT---GQLGIGAGQFKMANGIAVDDTGYIYVVD 145
Query: 264 SGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNG-NILVCDRENHRIQVF 319
S +N +Q+F P G F+R FG +G+ G+F G+A ++ V D N RIQ F
Sbjct: 146 SLDNCVQVFNPAGGFVRRFGTFGAAAGQFSTPTGIAFEKRARHLAVVDTRNGRIQFF 202
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 66/229 (28%), Positives = 101/229 (44%)
Query: 59 RGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSN 118
+G+AV D S++V+ + + + F GIAV I V DS +
Sbjct: 89 QGVAVASDGSLIVSQGNGVVIVDGAGSVTGQLGIGAGQFKMANGIAVDDTGYIYVVDSLD 148
Query: 119 HRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR-VIVSDSNNHRVQIFDVNGRV 177
+ VQVF G FV +FG+ G AGQ P IA R + V D+ N R+Q FD NG
Sbjct: 149 NCVQVFNPAGGFVRRFGTFGAAAGQFSTPTGIAFEKRARHLAVVDTRNGRIQFFDTNG-- 206
Query: 178 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-------RVIVSDSNNHRVQIFDVNG- 229
TFV G+ G+ + P +A +N R+ V D+ +VQ+ +
Sbjct: 207 -----TFVRSIGAFGSGPLKFTAPQGVAFEYSNDPTPVLKRMYVVDTFQGQVQVVEPAAV 261
Query: 230 RVITSF-GSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIFTPDG 276
V ++ G G+ G+L P + D G + V + G + ++ DG
Sbjct: 262 PVFLAYIGGYGTTNGKLMVPSDLRFDQANGRLLVVN-GYGNLTVYGIDG 309
Score = 127 (49.8 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 52/198 (26%), Positives = 83/198 (41%)
Query: 46 GSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPH--FDLKTNCVFLA---FTWP 100
G G G F GIAV I V DS ++ VQV P F + A F+ P
Sbjct: 118 GQLGIGAGQFKMANGIAVDDTGYIYVVDSLDNCVQVFNPAGGFVRRFGTFGAAAGQFSTP 177
Query: 101 RGIAVGPD-NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
GIA + V D+ N R+Q F ++GTFV G+ G+ + P +A +N
Sbjct: 178 TGIAFEKRARHLAVVDTRNGRIQFFDTNGTFVRSIGAFGSGPLKFTAPQGVAFEYSNDPT 237
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGT--FVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSD 216
+ V F +V + F+ G G G+L P + N R++V +
Sbjct: 238 PVLKRMYVVDTFQGQVQVVEPAAVPVFLAYIGGYGTTNGKLMVPSDLRFDQANGRLLVVN 297
Query: 217 SNNHRVQIFDVNGRVITS 234
+ + ++ ++G +T+
Sbjct: 298 GYGN-LTVYGIDGGGLTT 314
>WB|WBGene00003598 [details] [associations]
symbol:nhl-2 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
[GO:0045962 "positive regulation of development, heterochronic"
evidence=IMP] [GO:0040034 "regulation of development,
heterochronic" evidence=IGI] [GO:0017151 "DEAD/H-box RNA helicase
binding" evidence=IPI] [GO:0043186 "P granule" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001258
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 SMART:SM00502 Prosite:PS00518
GO:GO:0046872 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
GO:GO:0000003 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932
InterPro:IPR017907 GeneTree:ENSGT00550000074377 GO:GO:0043186
EMBL:FO080682 GO:GO:0045962 PIR:T16169 RefSeq:NP_498026.1
ProteinModelPortal:Q19818 SMR:Q19818 IntAct:Q19818 STRING:Q19818
PaxDb:Q19818 EnsemblMetazoa:F26F4.7 GeneID:175654
KEGG:cel:CELE_F26F4.7 UCSC:F26F4.7 CTD:175654 WormBase:F26F4.7
eggNOG:NOG326258 HOGENOM:HOG000021318 InParanoid:Q19818 OMA:PMQIRCK
NextBio:889076 Uniprot:Q19818
Length = 1032
Score = 188 (71.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 83/318 (26%), Positives = 139/318 (43%)
Query: 18 TLLVSGIGQVGTTPRSQYLQKRRLQFKIGS--RGSEPGCFTWPRGIAVGPDNSIVVADSS 75
T S +GQ + +Q + ++ G+ +GS P G + + I++AD++
Sbjct: 712 TTTASDVGQSQNSANAQRVSDLKVHSVFGTSQQGSTIRELHCPSGFCLSDTDDILIADTN 771
Query: 76 NHRVQVCFPHFDLK-----TNCVFLAFTWPRGIAV--GPDNSIVVADSSNH---RVQVFQ 125
NHRV VC P K T+ L F PR + G VV D R Q+F+
Sbjct: 772 NHRVVVCGPPHPWKIGRPGTDDGQLCF--PRKVIALRGEAVRYVVLDKGGDGKTRAQIFE 829
Query: 126 SDGTFVGKFGSMGN-KAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG-RVFQSDGT 183
+ G FV + M G +E A N ++V + V DV+ RV T
Sbjct: 830 ARGEFVKRLNMMALVPRGGIEVSAAAATPNGQLLLVDTAGF--VYSIDVDAPRV-----T 882
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEG 243
F F + + QL +A+ + N + ++D +H VQ++ G+ I G E
Sbjct: 883 FW--FDA----STQLGEASDVAMFD-NLIYITDFKHHCVQVYTSEGKFIRKMG----EPS 931
Query: 244 QLKFPRGVAVDDQGYISVGDS-GNN-RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVM 301
Q +P G+ V G + V D+ GN+ + +F+P+GQ + +F + G+ +
Sbjct: 932 QTPYPIGIDVSKAGEVLVADTHGNHLHVVVFSPEGQHIHSFT---HNEFRLSRCVGLRIA 988
Query: 302 SNGNILVCDRENHRIQVF 319
+G+I+ + NH + VF
Sbjct: 989 KSGHIVTLCKHNHTLFVF 1006
>UNIPROTKB|Q748W6 [details] [associations]
symbol:GSU2885 "NHL repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016134 Prosite:PS00018 GO:GO:0000272 Gene3D:2.120.10.30
InterPro:IPR011042 InterPro:IPR018247 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR013017 PROSITE:PS51125
Gene3D:1.10.1330.10 SUPFAM:SSF63446 InterPro:IPR022409
SMART:SM00089 HOGENOM:HOG000276039 ProtClustDB:CLSK828987
RefSeq:NP_953927.1 ProteinModelPortal:Q748W6 GeneID:2688642
KEGG:gsu:GSU2885 PATRIC:22028631 OMA:TGQFKMA
BioCyc:GSUL243231:GH27-2858-MONOMER Uniprot:Q748W6
Length = 888
Score = 171 (65.3 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 54/167 (32%), Positives = 83/167 (49%)
Query: 160 VSDSNNHRVQIF-DVNGRVFQSD--GTFVGKFGSMGNKAGQL---EHPHYIAVSNTNRVI 213
V+D V++ D +G ++ +D G + +F S G + + P +A++ T ++
Sbjct: 40 VTDGLRSPVRLATDSSGNLYVTDSRGGGIVRFTSTGRFDRLIPTAKAPQGVALTATGNLV 99
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
VS + V + D G+ + GS G+ GQ K GV +D G I V DS N +Q+FT
Sbjct: 100 VSQGDF--VALMDQTGKELRRLGS-GT--GQFKMANGVVLDAAGRIYVTDSLGNCVQVFT 154
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMS-NGNILVCDRENHRIQVF 319
G +L FG G G G+F G+A +G + V D N RIQ F
Sbjct: 155 ATGDYLSRFGTAGFGSGQFNMPTGIAYEKISGQLAVVDSLNGRIQFF 201
Score = 171 (65.3 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 63/206 (30%), Positives = 98/206 (47%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+A+ ++VV S V + G + + GS G GQ + + + + R+
Sbjct: 87 PQGVALTATGNLVV--SQGDFVALMDQTGKELRRLGS-GT--GQFKMANGVVLDAAGRIY 141
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSN 218
V+DS + VQ VF + G ++ +FG+ G +GQ P IA + ++ V DS
Sbjct: 142 VTDSLGNCVQ-------VFTATGDYLSRFGTAGFGSGQFNMPTGIAYEKISGQLAVVDSL 194
Query: 219 NHRVQIFDVNG---RVITSFGSEGSEEGQLKF--PRGVAVD-DQGY------ISVGDSGN 266
N R+Q FD NG R + SFGS G LK P+G+ + G + V DS
Sbjct: 195 NGRIQFFDTNGIFQRTLCSFGS-----GPLKLTLPQGITFEYSAGATPTLLRMYVVDSFQ 249
Query: 267 NRIQIFTP--DGQFLRAFGCWGSGDG 290
+ +Q+ P G FL G +G+G G
Sbjct: 250 STVQVIDPAGSGAFLAFIGSYGAGTG 275
Score = 167 (63.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 54/187 (28%), Positives = 89/187 (47%)
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQL---EHPHYIAVSNTNRVIVSD 162
G + + +A S+ + V S G + +F S G + + P +A++ T ++VS
Sbjct: 43 GLRSPVRLATDSSGNLYVTDSRGGGIVRFTSTGRFDRLIPTAKAPQGVALTATGNLVVSQ 102
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
+ V + D G+ + G+ G+F M N G + + R+ V+DS + V
Sbjct: 103 GDF--VALMDQTGKELRRLGSGTGQF-KMAN--G-------VVLDAAGRIYVTDSLGNCV 150
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIFTPDGQFLRA 281
Q+F G ++ FG+ G GQ P G+A + G ++V DS N RIQ F +G F R
Sbjct: 151 QVFTATGDYLSRFGTAGFGSGQFNMPTGIAYEKISGQLAVVDSLNGRIQFFDTNGIFQRT 210
Query: 282 FGCWGSG 288
+GSG
Sbjct: 211 LCSFGSG 217
Score = 154 (59.3 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 52/166 (31%), Positives = 73/166 (43%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-T 155
F G+ + I V DS + VQVF + G ++ +FG+ G +GQ P IA +
Sbjct: 126 FKMANGVVLDAAGRIYVTDSLGNCVQVFTATGDYLSRFGTAGFGSGQFNMPTGIAYEKIS 185
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN--RVI 213
++ V DS N R+Q FD NG +FQ G G + Q Y A + R+
Sbjct: 186 GQLAVVDSLNGRIQFFDTNG-IFQRTLCSFGS-GPLKLTLPQGITFEYSAGATPTLLRMY 243
Query: 214 VSDSNNHRVQIFDV--NGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
V DS VQ+ D +G + GS G+ G L P D G
Sbjct: 244 VVDSFQSTVQVIDPAGSGAFLAFIGSYGAGTGLLNAPSDALFDAAG 289
>TIGR_CMR|GSU_2885 [details] [associations]
symbol:GSU_2885 "NHL repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016134 Prosite:PS00018 GO:GO:0000272 Gene3D:2.120.10.30
InterPro:IPR011042 InterPro:IPR018247 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR013017 PROSITE:PS51125
Gene3D:1.10.1330.10 SUPFAM:SSF63446 InterPro:IPR022409
SMART:SM00089 HOGENOM:HOG000276039 ProtClustDB:CLSK828987
RefSeq:NP_953927.1 ProteinModelPortal:Q748W6 GeneID:2688642
KEGG:gsu:GSU2885 PATRIC:22028631 OMA:TGQFKMA
BioCyc:GSUL243231:GH27-2858-MONOMER Uniprot:Q748W6
Length = 888
Score = 171 (65.3 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 54/167 (32%), Positives = 83/167 (49%)
Query: 160 VSDSNNHRVQIF-DVNGRVFQSD--GTFVGKFGSMGNKAGQL---EHPHYIAVSNTNRVI 213
V+D V++ D +G ++ +D G + +F S G + + P +A++ T ++
Sbjct: 40 VTDGLRSPVRLATDSSGNLYVTDSRGGGIVRFTSTGRFDRLIPTAKAPQGVALTATGNLV 99
Query: 214 VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
VS + V + D G+ + GS G+ GQ K GV +D G I V DS N +Q+FT
Sbjct: 100 VSQGDF--VALMDQTGKELRRLGS-GT--GQFKMANGVVLDAAGRIYVTDSLGNCVQVFT 154
Query: 274 PDGQFLRAFGCWGSGDGEFKGLEGVAVMS-NGNILVCDRENHRIQVF 319
G +L FG G G G+F G+A +G + V D N RIQ F
Sbjct: 155 ATGDYLSRFGTAGFGSGQFNMPTGIAYEKISGQLAVVDSLNGRIQFF 201
Score = 171 (65.3 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 63/206 (30%), Positives = 98/206 (47%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P+G+A+ ++VV S V + G + + GS G GQ + + + + R+
Sbjct: 87 PQGVALTATGNLVV--SQGDFVALMDQTGKELRRLGS-GT--GQFKMANGVVLDAAGRIY 141
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-TNRVIVSDSN 218
V+DS + VQ VF + G ++ +FG+ G +GQ P IA + ++ V DS
Sbjct: 142 VTDSLGNCVQ-------VFTATGDYLSRFGTAGFGSGQFNMPTGIAYEKISGQLAVVDSL 194
Query: 219 NHRVQIFDVNG---RVITSFGSEGSEEGQLKF--PRGVAVD-DQGY------ISVGDSGN 266
N R+Q FD NG R + SFGS G LK P+G+ + G + V DS
Sbjct: 195 NGRIQFFDTNGIFQRTLCSFGS-----GPLKLTLPQGITFEYSAGATPTLLRMYVVDSFQ 249
Query: 267 NRIQIFTP--DGQFLRAFGCWGSGDG 290
+ +Q+ P G FL G +G+G G
Sbjct: 250 STVQVIDPAGSGAFLAFIGSYGAGTG 275
Score = 167 (63.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 54/187 (28%), Positives = 89/187 (47%)
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQL---EHPHYIAVSNTNRVIVSD 162
G + + +A S+ + V S G + +F S G + + P +A++ T ++VS
Sbjct: 43 GLRSPVRLATDSSGNLYVTDSRGGGIVRFTSTGRFDRLIPTAKAPQGVALTATGNLVVSQ 102
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
+ V + D G+ + G+ G+F M N G + + R+ V+DS + V
Sbjct: 103 GDF--VALMDQTGKELRRLGSGTGQF-KMAN--G-------VVLDAAGRIYVTDSLGNCV 150
Query: 223 QIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYISVGDSGNNRIQIFTPDGQFLRA 281
Q+F G ++ FG+ G GQ P G+A + G ++V DS N RIQ F +G F R
Sbjct: 151 QVFTATGDYLSRFGTAGFGSGQFNMPTGIAYEKISGQLAVVDSLNGRIQFFDTNGIFQRT 210
Query: 282 FGCWGSG 288
+GSG
Sbjct: 211 LCSFGSG 217
Score = 154 (59.3 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 52/166 (31%), Positives = 73/166 (43%)
Query: 97 FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN-T 155
F G+ + I V DS + VQVF + G ++ +FG+ G +GQ P IA +
Sbjct: 126 FKMANGVVLDAAGRIYVTDSLGNCVQVFTATGDYLSRFGTAGFGSGQFNMPTGIAYEKIS 185
Query: 156 NRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN--RVI 213
++ V DS N R+Q FD NG +FQ G G + Q Y A + R+
Sbjct: 186 GQLAVVDSLNGRIQFFDTNG-IFQRTLCSFGS-GPLKLTLPQGITFEYSAGATPTLLRMY 243
Query: 214 VSDSNNHRVQIFDV--NGRVITSFGSEGSEEGQLKFPRGVAVDDQG 257
V DS VQ+ D +G + GS G+ G L P D G
Sbjct: 244 VVDSFQSTVQVIDPAGSGAFLAFIGSYGAGTGLLNAPSDALFDAAG 289
>UNIPROTKB|Q74A97 [details] [associations]
symbol:GSU2493 "NHL repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Gene3D:2.120.10.30 InterPro:IPR011042 EMBL:AE017180
GenomeReviews:AE017180_GR RefSeq:NP_953539.4 DNASU:2686465
GeneID:2686465 KEGG:gsu:GSU2493 PATRIC:22027831
HOGENOM:HOG000276526 ProtClustDB:CLSK924608
BioCyc:GSUL243231:GH27-2437-MONOMER Uniprot:Q74A97
Length = 301
Score = 157 (60.3 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 67/272 (24%), Positives = 111/272 (40%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRV-QVCFPHFDLKTNCVFLA--FTWPRGIAVGPDN 109
G P GIA G +VV+D+ R+ + ++ A +P + +
Sbjct: 40 GTMKAPEGIACGK-RQLVVSDTGGGRLLSYSIENGSVRGGTEIKAEQVPYPTKVQLTSKG 98
Query: 110 SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 169
I+V D R+ F +G+F G G A P I V + + + + D RV
Sbjct: 99 EILVIDGKLRRIAHFSPEGSFAGYLDLKGVPAPATIAPRGIRVDDKDNIHILDIFGARVI 158
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
+ D G FQS F + + + +AVS + ++ DS RV G
Sbjct: 159 VTDAAG-TFQSQMPFPEGYRFISD----------LAVSASGTTLLLDSVASRVYAA-ARG 206
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL-RAFGC-WGS 287
++G +E L+FP +A D QG I + D N + DG F R W +
Sbjct: 207 ETAFKPLTDGMKE-YLQFPTSIATDKQGKIFILDQTGNAVVTLGQDGSFQGRQLNIGWKN 265
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ ++ ++ ++++ DR N+RIQVF
Sbjct: 266 SFLHYPSQLCISEENDIDVVIADRNNNRIQVF 297
Score = 116 (45.9 bits), Expect = 0.00026, P = 0.00026
Identities = 46/173 (26%), Positives = 78/173 (45%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-AFTWPRGIAVGPDNSIVVADS 116
PRGI V ++I + D RV V ++ F + + +AV + ++ DS
Sbjct: 136 PRGIRVDDKDNIHILDIFGARVIVTDAAGTFQSQMPFPEGYRFISDLAVSASGTTLLLDS 195
Query: 117 SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
RV + G K + G K L+ P IA ++ + D + V G+
Sbjct: 196 VASRVYA-AARGETAFKPLTDGMKE-YLQFPTSIATDKQGKIFILDQTGNAVVTL---GQ 250
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR--VIVSDSNNHRVQIFDV 227
DG+F G+ ++G K L +P + +S N V+++D NN+R+Q+F V
Sbjct: 251 ----DGSFQGRQLNIGWKNSFLHYPSQLCISEENDIDVVIADRNNNRIQVFRV 299
>TIGR_CMR|GSU_2493 [details] [associations]
symbol:GSU_2493 "NHL repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Gene3D:2.120.10.30 InterPro:IPR011042 EMBL:AE017180
GenomeReviews:AE017180_GR RefSeq:NP_953539.4 DNASU:2686465
GeneID:2686465 KEGG:gsu:GSU2493 PATRIC:22027831
HOGENOM:HOG000276526 ProtClustDB:CLSK924608
BioCyc:GSUL243231:GH27-2437-MONOMER Uniprot:Q74A97
Length = 301
Score = 157 (60.3 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 67/272 (24%), Positives = 111/272 (40%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRV-QVCFPHFDLKTNCVFLA--FTWPRGIAVGPDN 109
G P GIA G +VV+D+ R+ + ++ A +P + +
Sbjct: 40 GTMKAPEGIACGK-RQLVVSDTGGGRLLSYSIENGSVRGGTEIKAEQVPYPTKVQLTSKG 98
Query: 110 SIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 169
I+V D R+ F +G+F G G A P I V + + + + D RV
Sbjct: 99 EILVIDGKLRRIAHFSPEGSFAGYLDLKGVPAPATIAPRGIRVDDKDNIHILDIFGARVI 158
Query: 170 IFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 229
+ D G FQS F + + + +AVS + ++ DS RV G
Sbjct: 159 VTDAAG-TFQSQMPFPEGYRFISD----------LAVSASGTTLLLDSVASRVYAA-ARG 206
Query: 230 RVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFL-RAFGC-WGS 287
++G +E L+FP +A D QG I + D N + DG F R W +
Sbjct: 207 ETAFKPLTDGMKE-YLQFPTSIATDKQGKIFILDQTGNAVVTLGQDGSFQGRQLNIGWKN 265
Query: 288 GDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ ++ ++ ++++ DR N+RIQVF
Sbjct: 266 SFLHYPSQLCISEENDIDVVIADRNNNRIQVF 297
Score = 116 (45.9 bits), Expect = 0.00026, P = 0.00026
Identities = 46/173 (26%), Positives = 78/173 (45%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-AFTWPRGIAVGPDNSIVVADS 116
PRGI V ++I + D RV V ++ F + + +AV + ++ DS
Sbjct: 136 PRGIRVDDKDNIHILDIFGARVIVTDAAGTFQSQMPFPEGYRFISDLAVSASGTTLLLDS 195
Query: 117 SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
RV + G K + G K L+ P IA ++ + D + V G+
Sbjct: 196 VASRVYA-AARGETAFKPLTDGMKE-YLQFPTSIATDKQGKIFILDQTGNAVVTL---GQ 250
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR--VIVSDSNNHRVQIFDV 227
DG+F G+ ++G K L +P + +S N V+++D NN+R+Q+F V
Sbjct: 251 ----DGSFQGRQLNIGWKNSFLHYPSQLCISEENDIDVVIADRNNNRIQVFRV 299
>UNIPROTKB|Q74EH3 [details] [associations]
symbol:GSU0989 "NHL repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001258 Pfam:PF01436 Gene3D:2.120.10.30
InterPro:IPR011042 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR006521 Pfam:PF09684
RefSeq:NP_952043.2 GeneID:2685663 KEGG:gsu:GSU0989 PATRIC:22024748
HOGENOM:HOG000144314 ProtClustDB:CLSK741811
BioCyc:GSUL243231:GH27-960-MONOMER InterPro:IPR011748
TIGRFAMs:TIGR02242 Uniprot:Q74EH3
Length = 669
Score = 156 (60.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 58/188 (30%), Positives = 94/188 (50%)
Query: 135 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF-DVNGRVFQSDGTF--VGKFGSM 191
G G++AG+L P +A+ + N + V+D++N+RV +F VN +V + G G+ +
Sbjct: 92 GGRGDRAGELSGPRAMALGSRN-LYVADTDNNRVCVFATVNWQVRRFIGAENPAGE-PAA 149
Query: 192 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGV 251
G G+ + P +AV + + V D+ N R+Q FD +G + G++ +LK P +
Sbjct: 150 GTGPGEFDRPLDLAVDPCDNLYVLDAGNRRIQRFDYHGEPVPHVPPFGAD--RLKQPVAL 207
Query: 252 AVDDQGYISVG-------DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNG 304
A+ S G D+G I F G+FL G G D F+ G+AV ++G
Sbjct: 208 ALGPAPSPSGGGALVHCLDTGLTAIVTFDDQGRFL---GTVGLDDLGFEPA-GLAVDADG 263
Query: 305 NILVCDRE 312
V DRE
Sbjct: 264 KWYVSDRE 271
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 67/223 (30%), Positives = 102/223 (45%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDG----TFVGKFGSMGNKA-----GQLEHPHYI 150
PR +A+G N + VAD+ N+RV VF + F+G G A G+ + P +
Sbjct: 104 PRAMALGSRN-LYVADTDNNRVCVFATVNWQVRRFIGAENPAGEPAAGTGPGEFDRPLDL 162
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS--- 207
AV + + V D+ N R+Q FD +G V FG A +L+ P +A+
Sbjct: 163 AVDPCDNLYVLDAGNRRIQRFDYHGEPVPH----VPPFG-----ADRLKQPVALALGPAP 213
Query: 208 --NTNRVIVS--DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF-PRGVAVDDQG--YIS 260
+ +V D+ + FD GR + G+ G ++ L F P G+AVD G Y+S
Sbjct: 214 SPSGGGALVHCLDTGLTAIVTFDDQGRFL---GTVGLDD--LGFEPAGLAVDADGKWYVS 268
Query: 261 VGDSGNNRIQI---FTP----DGQFLRAFGCWGSGDGEFKGLE 296
+ I+ ++P +G+ LR F G G GEF LE
Sbjct: 269 DRERFIYAIRSAGDWSPLEEYEGKALRLFA--GPG-GEFYALE 308
>TIGR_CMR|GSU_0989 [details] [associations]
symbol:GSU_0989 "NHL repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001258 Pfam:PF01436 Gene3D:2.120.10.30
InterPro:IPR011042 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR006521 Pfam:PF09684
RefSeq:NP_952043.2 GeneID:2685663 KEGG:gsu:GSU0989 PATRIC:22024748
HOGENOM:HOG000144314 ProtClustDB:CLSK741811
BioCyc:GSUL243231:GH27-960-MONOMER InterPro:IPR011748
TIGRFAMs:TIGR02242 Uniprot:Q74EH3
Length = 669
Score = 156 (60.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 58/188 (30%), Positives = 94/188 (50%)
Query: 135 GSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF-DVNGRVFQSDGTF--VGKFGSM 191
G G++AG+L P +A+ + N + V+D++N+RV +F VN +V + G G+ +
Sbjct: 92 GGRGDRAGELSGPRAMALGSRN-LYVADTDNNRVCVFATVNWQVRRFIGAENPAGE-PAA 149
Query: 192 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGV 251
G G+ + P +AV + + V D+ N R+Q FD +G + G++ +LK P +
Sbjct: 150 GTGPGEFDRPLDLAVDPCDNLYVLDAGNRRIQRFDYHGEPVPHVPPFGAD--RLKQPVAL 207
Query: 252 AVDDQGYISVG-------DSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNG 304
A+ S G D+G I F G+FL G G D F+ G+AV ++G
Sbjct: 208 ALGPAPSPSGGGALVHCLDTGLTAIVTFDDQGRFL---GTVGLDDLGFEPA-GLAVDADG 263
Query: 305 NILVCDRE 312
V DRE
Sbjct: 264 KWYVSDRE 271
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 67/223 (30%), Positives = 102/223 (45%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDG----TFVGKFGSMGNKA-----GQLEHPHYI 150
PR +A+G N + VAD+ N+RV VF + F+G G A G+ + P +
Sbjct: 104 PRAMALGSRN-LYVADTDNNRVCVFATVNWQVRRFIGAENPAGEPAAGTGPGEFDRPLDL 162
Query: 151 AVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS--- 207
AV + + V D+ N R+Q FD +G V FG A +L+ P +A+
Sbjct: 163 AVDPCDNLYVLDAGNRRIQRFDYHGEPVPH----VPPFG-----ADRLKQPVALALGPAP 213
Query: 208 --NTNRVIVS--DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKF-PRGVAVDDQG--YIS 260
+ +V D+ + FD GR + G+ G ++ L F P G+AVD G Y+S
Sbjct: 214 SPSGGGALVHCLDTGLTAIVTFDDQGRFL---GTVGLDD--LGFEPAGLAVDADGKWYVS 268
Query: 261 VGDSGNNRIQI---FTP----DGQFLRAFGCWGSGDGEFKGLE 296
+ I+ ++P +G+ LR F G G GEF LE
Sbjct: 269 DRERFIYAIRSAGDWSPLEEYEGKALRLFA--GPG-GEFYALE 308
>UNIPROTKB|F1PA77 [details] [associations]
symbol:NHLRC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031398 "positive regulation
of protein ubiquitination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005634 GO:GO:0048471 GO:GO:0043161 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842
InterPro:IPR013017 PROSITE:PS51125 GO:GO:0000209 InterPro:IPR017907
GeneTree:ENSGT00550000074377 OMA:PRNLPCG EMBL:AAEX03017573
Ensembl:ENSCAFT00000016124 Uniprot:F1PA77
Length = 380
Score = 149 (57.5 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 57/229 (24%), Positives = 104/229 (45%)
Query: 100 PRGIAVGPDNS-IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P G+A+ P +VV RV++F S G +FG G A + +P +AV+N V
Sbjct: 114 PTGLALCPKTGRVVVVHDGRRRVKIFDSGGGCAHQFGEKGEAAQDIRYPLDVAVTNDCHV 173
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+V+D+ + +++FD G++ K +G+ Q P + + N V+V+D+
Sbjct: 174 VVTDAGDRSIKVFDFFGQI---------KL-VIGD---QFSLPWGVETTPQNGVVVTDAE 220
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYISV--------GDSGNNRI 269
+ + +V+ +E +G L PRGVAV G I+V +G+ +
Sbjct: 221 AGSLHLLEVDFAEGALQRTE-KLQGHLCSPRGVAVSWLTGAIAVLEHPPGLGAGAGSTAV 279
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN--GNILVCDRENHRI 316
++F+P Q + +G + AV + GN++V D + +
Sbjct: 280 KVFSPTMQLIGQVDTFGLSLFFPSRITASAVTFDHQGNVIVADTSSQAV 328
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 35/118 (29%), Positives = 54/118 (45%)
Query: 196 GQLEHPHYIAVS-NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
G L +P +A+ T RV+V RV+IFD G FG +G +++P VAV
Sbjct: 109 GTLVNPTGLALCPKTGRVVVVHDGRRRVKIFDSGGGCAHQFGEKGEAAQDIRYPLDVAVT 168
Query: 255 DQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRE 312
+ ++ V D+G+ I++F GQ G +F GV ++V D E
Sbjct: 169 NDCHVVVTDAGDRSIKVFDFFGQIKLVIG------DQFSLPWGVETTPQNGVVVTDAE 220
>UNIPROTKB|Q74A85 [details] [associations]
symbol:GSU2505 "Uncharacterized protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Gene3D:2.120.10.30 InterPro:IPR011042 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR013017 PROSITE:PS51125
RefSeq:NP_953551.1 ProteinModelPortal:Q74A85 GeneID:2687829
KEGG:gsu:GSU2505 PATRIC:22027855 HOGENOM:HOG000276516 OMA:PIAMSWA
ProtClustDB:CLSK924615 BioCyc:GSUL243231:GH27-2457-MONOMER
Uniprot:Q74A85
Length = 315
Score = 142 (55.0 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 45/168 (26%), Positives = 71/168 (42%)
Query: 108 DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSNNH 166
D I + + V + +G +V K + + E NT + DS+
Sbjct: 149 DGKICLVSLGSMMVVMLDPEGNYV-KHIDLAEASSVTEEDRL----NTGIGAVAFDSDGS 203
Query: 167 RVQIFDVNGRVFQ--SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 224
+ V G+VF+ ++GT V FG G+ G+ P IAV +SD + +
Sbjct: 204 VLFTSPVTGKVFRISANGT-VESFGKRGSAPGKFGVPTGIAVDGLGNYYISDKLRCAILV 262
Query: 225 FDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
FD + I FG G G L P +A+D +G + VG GN + +F
Sbjct: 263 FDRQFKFIYEFGGRGDAPGSLVGPDDLAIDAEGKLYVGQLGNRGVSVF 310
Score = 127 (49.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 43/179 (24%), Positives = 71/179 (39%)
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY--- 203
P +A NR+++ D V + + + +G +V K + + E
Sbjct: 134 PEKLAAFKPNRLMLRDGKICLVSLGSMMVVMLDPEGNYV-KHIDLAEASSVTEEDRLNTG 192
Query: 204 ---IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
+A + V+ + +V NG V SFG GS G+ P G+AVD G
Sbjct: 193 IGAVAFDSDGSVLFTSPVTGKVFRISANGTV-ESFGKRGSAPGKFGVPTGIAVDGLGNYY 251
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ D I +F +F+ FG G G G + +A+ + G + V N + VF
Sbjct: 252 ISDKLRCAILVFDRQFKFIYEFGGRGDAPGSLVGPDDLAIDAEGKLYVGQLGNRGVSVF 310
Score = 113 (44.8 bits), Expect = 0.00062, P = 0.00062
Identities = 34/125 (27%), Positives = 54/125 (43%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+A D S++ +V ++GT V FG G+ G+ P IAV +SD
Sbjct: 196 VAFDSDGSVLFTSPVTGKVFRISANGT-VESFGKRGSAPGKFGVPTGIAVDGLGNYYISD 254
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
+ +FD R F+ F+ +FG G+ G L P +A+ ++ V N V
Sbjct: 255 KLRCAILVFD---RQFK----FIYEFGGRGDAPGSLVGPDDLAIDAEGKLYVGQLGNRGV 307
Query: 223 QIFDV 227
+F V
Sbjct: 308 SVFKV 312
>TIGR_CMR|GSU_2505 [details] [associations]
symbol:GSU_2505 "NHL repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Gene3D:2.120.10.30 InterPro:IPR011042 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR013017 PROSITE:PS51125
RefSeq:NP_953551.1 ProteinModelPortal:Q74A85 GeneID:2687829
KEGG:gsu:GSU2505 PATRIC:22027855 HOGENOM:HOG000276516 OMA:PIAMSWA
ProtClustDB:CLSK924615 BioCyc:GSUL243231:GH27-2457-MONOMER
Uniprot:Q74A85
Length = 315
Score = 142 (55.0 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 45/168 (26%), Positives = 71/168 (42%)
Query: 108 DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSNNH 166
D I + + V + +G +V K + + E NT + DS+
Sbjct: 149 DGKICLVSLGSMMVVMLDPEGNYV-KHIDLAEASSVTEEDRL----NTGIGAVAFDSDGS 203
Query: 167 RVQIFDVNGRVFQ--SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 224
+ V G+VF+ ++GT V FG G+ G+ P IAV +SD + +
Sbjct: 204 VLFTSPVTGKVFRISANGT-VESFGKRGSAPGKFGVPTGIAVDGLGNYYISDKLRCAILV 262
Query: 225 FDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
FD + I FG G G L P +A+D +G + VG GN + +F
Sbjct: 263 FDRQFKFIYEFGGRGDAPGSLVGPDDLAIDAEGKLYVGQLGNRGVSVF 310
Score = 127 (49.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 43/179 (24%), Positives = 71/179 (39%)
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHY--- 203
P +A NR+++ D V + + + +G +V K + + E
Sbjct: 134 PEKLAAFKPNRLMLRDGKICLVSLGSMMVVMLDPEGNYV-KHIDLAEASSVTEEDRLNTG 192
Query: 204 ---IAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
+A + V+ + +V NG V SFG GS G+ P G+AVD G
Sbjct: 193 IGAVAFDSDGSVLFTSPVTGKVFRISANGTV-ESFGKRGSAPGKFGVPTGIAVDGLGNYY 251
Query: 261 VGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ D I +F +F+ FG G G G + +A+ + G + V N + VF
Sbjct: 252 ISDKLRCAILVFDRQFKFIYEFGGRGDAPGSLVGPDDLAIDAEGKLYVGQLGNRGVSVF 310
Score = 113 (44.8 bits), Expect = 0.00062, P = 0.00062
Identities = 34/125 (27%), Positives = 54/125 (43%)
Query: 103 IAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 162
+A D S++ +V ++GT V FG G+ G+ P IAV +SD
Sbjct: 196 VAFDSDGSVLFTSPVTGKVFRISANGT-VESFGKRGSAPGKFGVPTGIAVDGLGNYYISD 254
Query: 163 SNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 222
+ +FD R F+ F+ +FG G+ G L P +A+ ++ V N V
Sbjct: 255 KLRCAILVFD---RQFK----FIYEFGGRGDAPGSLVGPDDLAIDAEGKLYVGQLGNRGV 307
Query: 223 QIFDV 227
+F V
Sbjct: 308 SVFKV 312
>UNIPROTKB|Q3AD77 [details] [associations]
symbol:CHY_1061 "NHL repeat protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP000141 GenomeReviews:CP000141_GR
Gene3D:2.120.10.30 InterPro:IPR011042 InterPro:IPR013017
PROSITE:PS51125 RefSeq:YP_359907.1 ProteinModelPortal:Q3AD77
STRING:Q3AD77 GeneID:3728805 KEGG:chy:CHY_1061 PATRIC:21275257
eggNOG:NOG73340 OMA:FVADANQ BioCyc:CHYD246194:GJCN-1060-MONOMER
Uniprot:Q3AD77
Length = 303
Score = 141 (54.7 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 42/141 (29%), Positives = 73/141 (51%)
Query: 132 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM 191
G++ K G L P Y+ V + + V+D+ +RV VNG++ +S F FG
Sbjct: 174 GRYLKTLTKNGDLVSPSYLQVVG-DELFVTDAAANRV----VNGKMEES---FTRVFGD- 224
Query: 192 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGV 251
G L P IAV + ++V+++ +R+ F G+ + SFG +G E Q+ P G+
Sbjct: 225 ----GYLLCPRGIAVF-ADTIVVANTLLNRIDAFSATGKYLWSFGEKGHELNQMFLPTGI 279
Query: 252 AVDDQGYISVGDSGNNRIQIF 272
A ++ ++V D GN R+ ++
Sbjct: 280 AYAEE-LLAVADQGNGRVVVY 299
Score = 107 (42.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 40/134 (29%), Positives = 66/134 (49%)
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL 245
G++ K G L P Y+ V + + V+D+ +RV VNG++ SF + +G L
Sbjct: 174 GRYLKTLTKNGDLVSPSYLQVVG-DELFVTDAAANRV----VNGKMEESF-TRVFGDGYL 227
Query: 246 KFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
PRG+AV + V ++ NRI F+ G++L +FG G + G+A
Sbjct: 228 LCPRGIAVFADTIV-VANTLLNRIDAFSATGKYLWSFGEKGHELNQMFLPTGIAYAEE-L 285
Query: 306 ILVCDRENHRIQVF 319
+ V D+ N R+ V+
Sbjct: 286 LAVADQGNGRVVVY 299
Score = 67 (28.6 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 29/125 (23%), Positives = 53/125 (42%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--FTWPRGIAVGPDNSIVVAD 115
P G+ + D I V D + +V V F C FT+P + V + I V+D
Sbjct: 63 PCGVFIR-DAKIYVTDGARKKVYV-FETDGTPVACFGQKGEFTYPWSVYVDSEGKIYVSD 120
Query: 116 SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 175
+ ++ + + + G A L+ P I + +++ V+D+N V + D G
Sbjct: 121 LMDGVIKEIDPESGIIRELG-----AEFLKSPMGIWIEG-DKMFVADANQRSVILMDKEG 174
Query: 176 RVFQS 180
R ++
Sbjct: 175 RYLKT 179
>TIGR_CMR|CHY_1061 [details] [associations]
symbol:CHY_1061 "NHL repeat protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP000141 GenomeReviews:CP000141_GR
Gene3D:2.120.10.30 InterPro:IPR011042 InterPro:IPR013017
PROSITE:PS51125 RefSeq:YP_359907.1 ProteinModelPortal:Q3AD77
STRING:Q3AD77 GeneID:3728805 KEGG:chy:CHY_1061 PATRIC:21275257
eggNOG:NOG73340 OMA:FVADANQ BioCyc:CHYD246194:GJCN-1060-MONOMER
Uniprot:Q3AD77
Length = 303
Score = 141 (54.7 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 42/141 (29%), Positives = 73/141 (51%)
Query: 132 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSM 191
G++ K G L P Y+ V + + V+D+ +RV VNG++ +S F FG
Sbjct: 174 GRYLKTLTKNGDLVSPSYLQVVG-DELFVTDAAANRV----VNGKMEES---FTRVFGD- 224
Query: 192 GNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGV 251
G L P IAV + ++V+++ +R+ F G+ + SFG +G E Q+ P G+
Sbjct: 225 ----GYLLCPRGIAVF-ADTIVVANTLLNRIDAFSATGKYLWSFGEKGHELNQMFLPTGI 279
Query: 252 AVDDQGYISVGDSGNNRIQIF 272
A ++ ++V D GN R+ ++
Sbjct: 280 AYAEE-LLAVADQGNGRVVVY 299
Score = 107 (42.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 40/134 (29%), Positives = 66/134 (49%)
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQL 245
G++ K G L P Y+ V + + V+D+ +RV VNG++ SF + +G L
Sbjct: 174 GRYLKTLTKNGDLVSPSYLQVVG-DELFVTDAAANRV----VNGKMEESF-TRVFGDGYL 227
Query: 246 KFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGN 305
PRG+AV + V ++ NRI F+ G++L +FG G + G+A
Sbjct: 228 LCPRGIAVFADTIV-VANTLLNRIDAFSATGKYLWSFGEKGHELNQMFLPTGIAYAEE-L 285
Query: 306 ILVCDRENHRIQVF 319
+ V D+ N R+ V+
Sbjct: 286 LAVADQGNGRVVVY 299
Score = 67 (28.6 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 29/125 (23%), Positives = 53/125 (42%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA--FTWPRGIAVGPDNSIVVAD 115
P G+ + D I V D + +V V F C FT+P + V + I V+D
Sbjct: 63 PCGVFIR-DAKIYVTDGARKKVYV-FETDGTPVACFGQKGEFTYPWSVYVDSEGKIYVSD 120
Query: 116 SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 175
+ ++ + + + G A L+ P I + +++ V+D+N V + D G
Sbjct: 121 LMDGVIKEIDPESGIIRELG-----AEFLKSPMGIWIEG-DKMFVADANQRSVILMDKEG 174
Query: 176 RVFQS 180
R ++
Sbjct: 175 RYLKT 179
>WB|WBGene00020556 [details] [associations]
symbol:pamn-1 species:6239 "Caenorhabditis elegans"
[GO:0004497 "monooxygenase activity" evidence=IEA] [GO:0005507
"copper ion binding" evidence=IEA] [GO:0016715 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, reduced ascorbate as one donor, and
incorporation of one atom of oxygen" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0004504
"peptidylglycine monooxygenase activity" evidence=IEA] [GO:0006518
"peptide metabolic process" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000323 InterPro:IPR000720 InterPro:IPR001258
InterPro:IPR008977 InterPro:IPR014783 InterPro:IPR014784
Pfam:PF01082 Pfam:PF01436 PRINTS:PR00790 PROSITE:PS00084
PROSITE:PS00085 GO:GO:0005576 GO:GO:0016020 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0005507 GO:GO:0006518 EMBL:FO080338
PIR:T25895 RefSeq:NP_491666.2 HSSP:P14925 ProteinModelPortal:P83388
SMR:P83388 PaxDb:P83388 EnsemblMetazoa:T19B4.1 GeneID:266833
KEGG:cel:CELE_T19B4.1 UCSC:T19B4.1 CTD:266833 WormBase:T19B4.1
eggNOG:COG3391 GeneTree:ENSGT00530000063085 HOGENOM:HOG000020461
InParanoid:P83388 KO:K00504 OMA:RTHTHAM NextBio:953204
GO:GO:0004598 GO:GO:0004504 Gene3D:2.60.120.230 Gene3D:2.60.120.310
InterPro:IPR013017 SUPFAM:SSF49742 PROSITE:PS51125 Uniprot:P83388
Length = 663
Score = 146 (56.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 44/146 (30%), Positives = 63/146 (43%)
Query: 142 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHP 201
GQ PH I V V +D +H V + + G ++ T G+ G+ +H
Sbjct: 422 GQFYLPHGIYVDKDGFVYTTDVGSHTVAKWKIEGNELKNIWTS-GELLMPGSD----QH- 475
Query: 202 HYIAVSNTNRV----IVSDSN-NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQ 256
HY + RV V+D N RV + D+NG+ I FG G + GQ P + D
Sbjct: 476 HYCKPTGITRVEDQLYVTDGYCNSRVVVLDLNGKRIRQFGLPGEDAGQFNLPHDIVSDSA 535
Query: 257 GYISVGDSGNNRIQIFTPDGQFLRAF 282
G + V D N R+Q T G + F
Sbjct: 536 GRLLVTDRENGRVQHMTTQGHVIEEF 561
Score = 137 (53.3 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 39/129 (30%), Positives = 62/129 (48%)
Query: 196 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEG------SEEGQLKFPR 249
GQ PH I V V +D +H V + + G + + + G S++ P
Sbjct: 422 GQFYLPHGIYVDKDGFVYTTDVGSHTVAKWKIEGNELKNIWTSGELLMPGSDQHHYCKPT 481
Query: 250 GVA-VDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILV 308
G+ V+DQ Y++ G N+R+ + +G+ +R FG G G+F + S G +LV
Sbjct: 482 GITRVEDQLYVTDGYC-NSRVVVLDLNGKRIRQFGLPGEDAGQFNLPHDIVSDSAGRLLV 540
Query: 309 CDRENHRIQ 317
DREN R+Q
Sbjct: 541 TDRENGRVQ 549
Score = 126 (49.4 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 66/251 (26%), Positives = 99/251 (39%)
Query: 40 RLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVC-FPHFDLK---TNCVFL 95
+L+ K+G G F P GI V D + D +H V +LK T+ L
Sbjct: 414 KLERKLGG-----GQFYLPHGIYVDKDGFVYTTDVGSHTVAKWKIEGNELKNIWTSGELL 468
Query: 96 A-------FTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPH 148
+ P GI D V N RV V +G + +FG G AGQ PH
Sbjct: 469 MPGSDQHHYCKPTGITRVEDQLYVTDGYCNSRVVVLDLNGKRIRQFGLPGEDAGQFNLPH 528
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 208
I + R++V+D N RVQ G V + F K N H Y+ +
Sbjct: 529 DIVSDSAGRLLVTDRENGRVQHMTTQGHVIEE---F--KSTMFTNIYSAASHEDYVFMVP 583
Query: 209 TNRVIVSDSNNHRVQIF-DVNGRVITSFG--SEGSEE--G-QLKFPRGVAV-DDQGYISV 261
++ ++ V + G + +FG ++G E G Q P + V D G+I V
Sbjct: 584 GRPIMGHETEGIAVFVGRSGTGLIEYAFGPTTKGKREQMGPQFGQPHCLRVCPDGGHIFV 643
Query: 262 GDSGNNRIQIF 272
GD + +++
Sbjct: 644 GDIAEGKARLW 654
>MGI|MGI:2444520 [details] [associations]
symbol:Nhlrc3 "NHL repeat containing 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001258 Pfam:PF01436 MGI:MGI:2444520
Gene3D:2.120.10.30 InterPro:IPR011042 eggNOG:COG3391
InterPro:IPR013017 PROSITE:PS51125 CTD:387921 HOGENOM:HOG000070097
HOVERGEN:HBG104921 OMA:DTPHGMF OrthoDB:EOG4HT8SD EMBL:AK029465
EMBL:AK033167 EMBL:AK133986 EMBL:BC087903 EMBL:BC107356
IPI:IPI00228567 RefSeq:NP_766089.1 UniGene:Mm.85744
ProteinModelPortal:Q8CCH2 SMR:Q8CCH2 PhosphoSite:Q8CCH2
PaxDb:Q8CCH2 PRIDE:Q8CCH2 Ensembl:ENSMUST00000056749 GeneID:212114
KEGG:mmu:212114 UCSC:uc008per.1 GeneTree:ENSGT00390000008657
InParanoid:Q8CCH2 NextBio:373458 Bgee:Q8CCH2 CleanEx:MM_NHLRC3
Genevestigator:Q8CCH2 Uniprot:Q8CCH2
Length = 347
Score = 141 (54.7 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 62/231 (26%), Positives = 106/231 (45%)
Query: 103 IAVGPDNSIV-VADSSNH--RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT---N 156
+AV N +V VA ++ +V VF DG F+ + ++ PH + VS T
Sbjct: 66 VAVDSLNGLVYVAQRGDNIPKVLVFSEDGYFLRAWNYT------VDTPHGMFVSGTPFEQ 119
Query: 157 RVIVSDSNN----HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
V ++D + H V+ ++ G + Q GT GK G+ G Q ++P + V +T +
Sbjct: 120 SVWITDVGSGPYGHTVKKYNSLGDLVQVLGT-PGKKGT-GLNPLQFDNPAELYVDDTGEM 177
Query: 213 IVSDSN---NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
+ D + N+R+ + ++ G G+ + P V +D G + V D GN R+
Sbjct: 178 YIVDGDGGLNNRLVKLSQDFMILWLRGENGTGPAKFNIPHSVTLDAVGRVWVADRGNKRL 237
Query: 270 QIFTPD-GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN-HRIQV 318
Q+F D G++L G W + E +G V +G L+ + N R+ V
Sbjct: 238 QVFDKDTGEWL---GAWDNCFTE-EGPSAVRFTPDGKYLIVAQLNLSRLSV 284
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 49/158 (31%), Positives = 75/158 (47%)
Query: 177 VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT---NRVIVSDSNN----HRVQIFDVNG 229
VF DG F+ + ++ PH + VS T V ++D + H V+ ++ G
Sbjct: 89 VFSEDGYFLRAWNYT------VDTPHGMFVSGTPFEQSVWITDVGSGPYGHTVKKYNSLG 142
Query: 230 ---RVITSFGSEGSEEGQLKF--PRGVAVDDQG--YISVGDSG-NNRIQIFTPDGQFLRA 281
+V+ + G +G+ L+F P + VDD G YI GD G NNR+ + D L
Sbjct: 143 DLVQVLGTPGKKGTGLNPLQFDNPAELYVDDTGEMYIVDGDGGLNNRLVKLSQDFMILWL 202
Query: 282 FGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
G G+G +F V + + G + V DR N R+QVF
Sbjct: 203 RGENGTGPAKFNIPHSVTLDAVGRVWVADRGNKRLQVF 240
>WB|WBGene00017671 [details] [associations]
symbol:pgal-1 species:6239 "Caenorhabditis elegans"
[GO:0004504 "peptidylglycine monooxygenase activity" evidence=IEA]
[GO:0005507 "copper ion binding" evidence=IEA] [GO:0006518 "peptide
metabolic process" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR000720 InterPro:IPR001258 Pfam:PF01436
PRINTS:PR00790 GO:GO:0005576 GO:GO:0016020 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0005507 GO:GO:0006518 EMBL:FO081197
GeneTree:ENSGT00530000063085 GO:GO:0004598 GO:GO:0004504
InterPro:IPR013017 PROSITE:PS51125 eggNOG:NOG294010 OMA:VRGFTID
PIR:T25723 RefSeq:NP_491475.2 ProteinModelPortal:P91268 SMR:P91268
STRING:P91268 PaxDb:P91268 EnsemblMetazoa:F21F3.1.1
EnsemblMetazoa:F21F3.1.2 GeneID:172108 KEGG:cel:CELE_F21F3.1
UCSC:F21F3.1.1 CTD:172108 WormBase:F21F3.1 HOGENOM:HOG000045364
InParanoid:P91268 NextBio:874043 Uniprot:P91268
Length = 350
Score = 139 (54.0 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 56/217 (25%), Positives = 93/217 (42%)
Query: 123 VFQSDGTFVGKFG---SMGNKAGQL--EHPHYIAVSNTNRVIVSDS-NNHRVQIFD---V 173
VF+ D +G F +G +G ++ H +A + RV S N+H D +
Sbjct: 42 VFEQDRELIGLFNPSKEIGQVSGLAVNKNGHIVAFHRSGRVWDEKSFNDHETFNKDLGVI 101
Query: 174 NGR---VFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG- 229
N + + + + +FG AG PH + + N V+D +H+V D
Sbjct: 102 NNKTIAIISREKKVIDEFG-----AGLFYMPHGLTIDNNGDYWVTDVGSHQVHKIDAKTQ 156
Query: 230 RVITSFGSE---GSEEGQLKFPRGVAVDDQGYISVGDSG-NNRIQIFTPDGQFLRAFGCW 285
+++ S G + G ++ P VAV G+I V D N+RI F G +
Sbjct: 157 KIVMSLGEKMVPGEDQAHFCKPTDVAVAKNGHIFVADGYCNSRILKFDAKGNLMAQINAA 216
Query: 286 GSGD--GEFKGLEGVAVMSNGNIL-VCDRENHRIQVF 319
+ EF ++++ + NI+ V DREN R+Q F
Sbjct: 217 TEENQPSEFVVPHSLSLIEDMNIVCVADRENQRVQCF 253
Score = 114 (45.2 bits), Expect = 0.00059, P = 0.00059
Identities = 36/162 (22%), Positives = 67/162 (41%)
Query: 117 SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG- 175
+N + + + + +FG AG PH + + N V+D +H+V D
Sbjct: 102 NNKTIAIISREKKVIDEFG-----AGLFYMPHGLTIDNNGDYWVTDVGSHQVHKIDAKTQ 156
Query: 176 RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN-NHRVQIFDVNGRVITS 234
++ S +G+ G P +AV+ + V+D N R+ FD G ++
Sbjct: 157 KIVMS----LGEKMVPGEDQAHFCKPTDVAVAKNGHIFVADGYCNSRILKFDAKGNLMAQ 212
Query: 235 FGSEGSEEGQLKF--PRGVA-VDDQGYISVGDSGNNRIQIFT 273
+ E +F P ++ ++D + V D N R+Q F+
Sbjct: 213 INAATEENQPSEFVVPHSLSLIEDMNIVCVADRENQRVQCFS 254
>UNIPROTKB|Q5JS37 [details] [associations]
symbol:NHLRC3 "NHL repeat-containing protein 3"
species:9606 "Homo sapiens" [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR001258 Pfam:PF01436 GO:GO:0005576
EMBL:CH471075 Gene3D:2.120.10.30 InterPro:IPR011042 eggNOG:COG3391
InterPro:IPR013017 PROSITE:PS51125 EMBL:AK300260 EMBL:AL445590
EMBL:BC140877 EMBL:BC140878 EMBL:AL833329 IPI:IPI00552937
IPI:IPI00556271 RefSeq:NP_001012772.1 RefSeq:NP_001017370.1
UniGene:Hs.507783 ProteinModelPortal:Q5JS37 SMR:Q5JS37
PhosphoSite:Q5JS37 DMDM:74741946 PaxDb:Q5JS37 PRIDE:Q5JS37
Ensembl:ENST00000379599 Ensembl:ENST00000379600 GeneID:387921
KEGG:hsa:387921 UCSC:uc001uxc.3 CTD:387921 GeneCards:GC13P039612
H-InvDB:HIX0022671 HGNC:HGNC:33751 HPA:HPA013738 neXtProt:NX_Q5JS37
PharmGKB:PA162397544 HOGENOM:HOG000070097 HOVERGEN:HBG104921
InParanoid:Q5JS37 OMA:DTPHGMF OrthoDB:EOG4HT8SD PhylomeDB:Q5JS37
GenomeRNAi:387921 NextBio:101728 ArrayExpress:Q5JS37 Bgee:Q5JS37
CleanEx:HS_NHLRC3 Genevestigator:Q5JS37 Uniprot:Q5JS37
Length = 347
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 59/231 (25%), Positives = 104/231 (45%)
Query: 103 IAVGPDNSIV-VADSSNH--RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT---N 156
+AV N +V + ++ ++ VF DG F+ + ++ PH I ++T
Sbjct: 66 VAVDSLNGLVYIGQRGDNIPKILVFTEDGYFLRAWNYT------VDTPHGIFAASTLYEQ 119
Query: 157 RVIVSDSNN----HRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 212
V ++D + H V+ + G + Q GT GK G+ N Q ++P + V +T +
Sbjct: 120 SVWITDVGSGFFGHTVKKYSSFGDLVQVLGT-PGKKGTSLNPL-QFDNPAELYVEDTGDI 177
Query: 213 IVSDSN---NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
+ D + N+R+ + ++ G G+ + P V +D G + V D GN RI
Sbjct: 178 YIVDGDGGLNNRLIKLSQDFMILWLHGENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRI 237
Query: 270 QIFTPD-GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDREN-HRIQV 318
Q+F D G++L G W + E +G V +G L+ + N R+ V
Sbjct: 238 QVFDKDTGEWL---GAWNNCFTE-EGPSSVRFTPDGKYLIVAQLNLSRLSV 284
Score = 127 (49.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 59/198 (29%), Positives = 87/198 (43%)
Query: 142 GQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR-----VFQSDGTFVGKFGSMGNKAG 196
G +HP Y + T + DS N V I VF DG F+ +
Sbjct: 51 GWPKHPEYF--TGTTFCVAVDSLNGLVYIGQRGDNIPKILVFTEDGYFLRAWNYT----- 103
Query: 197 QLEHPHYIAVSNT---NRVIVSDSNN----HRVQIFDVNG---RVITSFGSEGSEEGQLK 246
++ PH I ++T V ++D + H V+ + G +V+ + G +G+ L+
Sbjct: 104 -VDTPHGIFAASTLYEQSVWITDVGSGFFGHTVKKYSSFGDLVQVLGTPGKKGTSLNPLQ 162
Query: 247 F--PRGVAVDDQG--YISVGDSG-NNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVM 301
F P + V+D G YI GD G NNR+ + D L G G+G +F V +
Sbjct: 163 FDNPAELYVEDTGDIYIVDGDGGLNNRLIKLSQDFMILWLHGENGTGPAKFNIPHSVTLD 222
Query: 302 SNGNILVCDRENHRIQVF 319
S G + V DR N RIQVF
Sbjct: 223 SAGRVWVADRGNKRIQVF 240
>TAIR|locus:2010728 [details] [associations]
symbol:AT1G56500 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA;ISS] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0009773 "photosynthetic electron transport in
photosystem I" evidence=RCA] [GO:0009902 "chloroplast relocation"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0016117 "carotenoid biosynthetic process"
evidence=RCA] [GO:0019252 "starch biosynthetic process"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0034660
"ncRNA metabolic process" evidence=RCA] InterPro:IPR001258
InterPro:IPR005833 InterPro:IPR006402 Pfam:PF01436 PRINTS:PR00413
InterPro:IPR000033 EMBL:CP002684 GO:GO:0009570 Gene3D:3.40.50.1000
InterPro:IPR023214 SUPFAM:SSF56784 Gene3D:2.120.10.30
InterPro:IPR011042 SMART:SM00135 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0016787 Pfam:PF13419
TIGRFAMs:TIGR01509 PROSITE:PS51352 GO:GO:0009534 EMBL:AY065399
IPI:IPI00547570 RefSeq:NP_564718.2 UniGene:At.28196
ProteinModelPortal:Q8VZ10 SMR:Q8VZ10 STRING:Q8VZ10 PRIDE:Q8VZ10
EnsemblPlants:AT1G56500.1 GeneID:842103 KEGG:ath:AT1G56500
TAIR:At1g56500 HOGENOM:HOG000030168 InParanoid:Q8VZ10 OMA:VCLYQSV
PhylomeDB:Q8VZ10 ProtClustDB:PLN02919 ArrayExpress:Q8VZ10
Genevestigator:Q8VZ10 Uniprot:Q8VZ10
Length = 1055
Score = 126 (49.4 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 30/99 (30%), Positives = 50/99 (50%)
Query: 133 KFGSMGNKAGQ--LEHPHYIAVSNTNRVIVSDSNNHRVQIFD-VNGRVFQSDGTFVGKFG 189
KFG + L+HP + +N ++ ++DS NH+++ D V RV GT F
Sbjct: 789 KFGDNDGVGAEVLLQHPLGVLCANDGQIYLTDSYNHKIKKLDPVTKRVVTLAGTGKAGFK 848
Query: 190 SMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
K QL P +A++ R+ V+D+NN ++ D+N
Sbjct: 849 DGKVKGAQLSEPAGLAITENGRLFVADTNNSLIRYIDLN 887
Score = 120 (47.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 37/132 (28%), Positives = 66/132 (50%)
Query: 149 YIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQ--LEHPHYIAV 206
YIA S ++ + D ++ G + S+ F KFG + L+HP +
Sbjct: 754 YIADSESSSIRALDLQTGGSRLL-AGGDPYFSENLF--KFGDNDGVGAEVLLQHPLGVLC 810
Query: 207 SNTNRVIVSDSNNHRVQIFD-VNGRVITSFGS------EGSEEG-QLKFPRGVAVDDQGY 258
+N ++ ++DS NH+++ D V RV+T G+ +G +G QL P G+A+ + G
Sbjct: 811 ANDGQIYLTDSYNHKIKKLDPVTKRVVTLAGTGKAGFKDGKVKGAQLSEPAGLAITENGR 870
Query: 259 ISVGDSGNNRIQ 270
+ V D+ N+ I+
Sbjct: 871 LFVADTNNSLIR 882
Score = 104 (41.7 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 40/159 (25%), Positives = 73/159 (45%)
Query: 99 WPRGIAVGP-DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKA---GQLE-----HPHY 149
+P +A+ +N + ++DS+++R+ V +G F+ + GS G + G E P
Sbjct: 568 FPGKLAIDTLNNRLFISDSNHNRIIVTDLEGNFIVQIGSSGEEGFQDGSFEDAAFNRPQG 627
Query: 150 IAVS-NTNRVIVSDSNNHRVQIFD-VNGRV--FQSDGTFVGKF--GSMGNKAGQLEHPHY 203
+A + N + V+D+ NH ++ D VN RV +GT + G G K L P
Sbjct: 628 LAYNAKKNLLYVADTENHALREIDFVNERVQTLAGNGTKGSDYQGGRKGTKQ-LLNSPWD 686
Query: 204 IAVSNTN-RVIVSDSNNHRVQIFDVNGRVITSFGSEGSE 241
+ N +V ++ + H++ + V + F G E
Sbjct: 687 VCFEPVNEKVYIAMAGQHQIWEYSVLDGITRVFSGNGYE 725
Score = 83 (34.3 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 30/93 (32%), Positives = 45/93 (48%)
Query: 235 FG-SEG-SEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQ---FLRAFGCWGSGD 289
FG ++G E L+ P GV + G I + DS N++I+ P + L G G D
Sbjct: 790 FGDNDGVGAEVLLQHPLGVLCANDGQIYLTDSYNHKIKKLDPVTKRVVTLAGTGKAGFKD 849
Query: 290 GEFKGLE-----GVAVMSNGNILVCDRENHRIQ 317
G+ KG + G+A+ NG + V D N I+
Sbjct: 850 GKVKGAQLSEPAGLAITENGRLFVADTNNSLIR 882
Score = 53 (23.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 49 GSEPGC--FTWPRGIAVGPD-NSIVVADSSNHRVQVCFPHFDLKT 90
GS P F P GI++GPD +ADS + ++ DL+T
Sbjct: 730 GSTPQTTSFAQPSGISLGPDLKEAYIADSESSSIRA----LDLQT 770
Score = 52 (23.4 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 96 AFTWPRGIAVGPD-NSIVVADSSNHRVQVF--QSDGT 129
+F P GI++GPD +ADS + ++ Q+ G+
Sbjct: 737 SFAQPSGISLGPDLKEAYIADSESSSIRALDLQTGGS 773
Score = 51 (23.0 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 49 GS-EPGCFTWPRGIAVGPD-NSIVVADSSNHRVQ 80
GS E F P+G+A N + VAD+ NH ++
Sbjct: 615 GSFEDAAFNRPQGLAYNAKKNLLYVADTENHALR 648
>RGD|735081 [details] [associations]
symbol:Nhlrc1 "NHL repeat containing 1" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination"
evidence=ISO;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0031398 "positive regulation of
protein ubiquitination" evidence=IEA;ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO;ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA;ISO]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 RGD:735081 Prosite:PS00518 GO:GO:0005783
GO:GO:0005634 GO:GO:0048471 GO:GO:0043161 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842
InterPro:IPR013017 PROSITE:PS51125 GO:GO:0000209 InterPro:IPR017907
GeneTree:ENSGT00550000074377 CTD:378884 eggNOG:NOG255948
HOGENOM:HOG000113780 HOVERGEN:HBG052617 KO:K10602 OMA:PRNLPCG
OrthoDB:EOG44QT1H EMBL:BK001524 IPI:IPI00396887 RefSeq:NP_954706.1
UniGene:Rn.103777 ProteinModelPortal:Q6IMG5 STRING:Q6IMG5
PRIDE:Q6IMG5 Ensembl:ENSRNOT00000031656 GeneID:364682
KEGG:rno:364682 InParanoid:Q6IMG5 NextBio:685821
Genevestigator:Q6IMG5 Uniprot:Q6IMG5
Length = 396
Score = 136 (52.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 60/224 (26%), Positives = 102/224 (45%)
Query: 100 PRGIAVGPDNS-IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P G+A+ P +VV RV++F S G +FG G+ A +++P +AV+N V
Sbjct: 126 PTGLALCPKTGRVVVVHDGKRRVKIFDSGGGGAHQFGEKGDAAHDVKYPLDVAVTNDCHV 185
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+V+D+ + +++FD G++ VGK Q P + ++ N V+V+D+
Sbjct: 186 VVTDAGDCSLKVFDFFGQI----KLVVGK---------QFSLPWGVEITPHNGVLVTDAE 232
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYISV-------G-DSGNN-R 268
+ + + + E + L PRGVAV G I+V G SGNN R
Sbjct: 233 AGTLHLLEADFPEGVLRRIERLQ-AHLCNPRGVAVSWLTGAIAVLEHPCALGTSSGNNTR 291
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN--GNILVCD 310
+++F Q + +G + AV + GN++V D
Sbjct: 292 VKVFNSSMQLIGQVDSFGLNLLFPSKITASAVTFDHQGNVIVAD 335
>UNIPROTKB|Q6VVB1 [details] [associations]
symbol:NHLRC1 "E3 ubiquitin-protein ligase NHLRC1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005783 GO:GO:0005634
GO:GO:0048471 GO:GO:0043161 GO:GO:0046872 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842 InterPro:IPR013017
PROSITE:PS51125 GO:GO:0000209 InterPro:IPR017907 MIM:254780
Orphanet:501 EMBL:AL589723 EMBL:AY324850 EMBL:BC103888
EMBL:BC103889 EMBL:BC103890 EMBL:BK001510 IPI:IPI00440247
RefSeq:NP_940988.2 UniGene:Hs.348351 ProteinModelPortal:Q6VVB1
SMR:Q6VVB1 IntAct:Q6VVB1 STRING:Q6VVB1 DMDM:50400890 PaxDb:Q6VVB1
PRIDE:Q6VVB1 Ensembl:ENST00000340650 GeneID:378884 KEGG:hsa:378884
UCSC:uc003ncl.1 CTD:378884 GeneCards:GC06M018065 HGNC:HGNC:21576
MIM:608072 neXtProt:NX_Q6VVB1 PharmGKB:PA134916338 eggNOG:NOG255948
HOGENOM:HOG000113780 HOVERGEN:HBG052617 InParanoid:Q6VVB1 KO:K10602
OMA:PRNLPCG OrthoDB:EOG44QT1H GenomeRNAi:378884 NextBio:100856
Bgee:Q6VVB1 CleanEx:HS_NHLRC1 Genevestigator:Q6VVB1 Uniprot:Q6VVB1
Length = 395
Score = 135 (52.6 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 40/155 (25%), Positives = 73/155 (47%)
Query: 100 PRGIAVGPDNS-IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P G+A+ P +VV RV++F S G +FG G+ A + +P + ++N V
Sbjct: 129 PTGLALCPKTGRVVVVHDGRRRVKIFDSGGGCAHQFGEKGDAAQDIRYPVDVTITNDCHV 188
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+V+D+ + +++FD G++ +G GQ P + + N ++V+D+
Sbjct: 189 VVTDAGDRSIKVFDFFGQI----KLVIG---------GQFSLPWGVETTPQNGIVVTDAE 235
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAV 253
+ + DV+ +E + L PRGVAV
Sbjct: 236 AGSLHLLDVDFAEGVLRRTERLQ-AHLCNPRGVAV 269
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 38/135 (28%), Positives = 62/135 (45%)
Query: 142 GQLEHPHYIAVS-NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH 200
G L +P +A+ T RV+V RV+IFD S G +FG G+ A + +
Sbjct: 124 GTLVNPTGLALCPKTGRVVVVHDGRRRVKIFD-------SGGGCAHQFGEKGDAAQDIRY 176
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYIS 260
P + ++N V+V+D+ + +++FD G++ G GQ P GV Q I
Sbjct: 177 PVDVTITNDCHVVVTDAGDRSIKVFDFFGQIKLVIG------GQFSLPWGVETTPQNGIV 230
Query: 261 VGDSGNNRIQIFTPD 275
V D+ + + D
Sbjct: 231 VTDAEAGSLHLLDVD 245
Score = 125 (49.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 35/118 (29%), Positives = 54/118 (45%)
Query: 196 GQLEHPHYIAVS-NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
G L +P +A+ T RV+V RV+IFD G FG +G +++P V +
Sbjct: 124 GTLVNPTGLALCPKTGRVVVVHDGRRRVKIFDSGGGCAHQFGEKGDAAQDIRYPVDVTIT 183
Query: 255 DQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRE 312
+ ++ V D+G+ I++F GQ G G+F GV I+V D E
Sbjct: 184 NDCHVVVTDAGDRSIKVFDFFGQIKLVIG------GQFSLPWGVETTPQNGIVVTDAE 235
>UNIPROTKB|F1MZH1 [details] [associations]
symbol:NHLRC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
GO:GO:0048471 GO:GO:0043161 GO:GO:0046872 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842 InterPro:IPR013017
PROSITE:PS51125 GO:GO:0000209 InterPro:IPR017907
GeneTree:ENSGT00550000074377 OMA:PRNLPCG EMBL:DAAA02055620
IPI:IPI00714384 Ensembl:ENSBTAT00000016029 Uniprot:F1MZH1
Length = 398
Score = 132 (51.5 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 56/223 (25%), Positives = 98/223 (43%)
Query: 100 PRGIAVGPDNS-IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P G+A+ P +VV RV+VF S G +FG G+ A L +P + V+N V
Sbjct: 133 PTGLALCPKTGRVVVVHDGKRRVKVFDSGGGCAHQFGEKGDAAQDLRYPVDVTVTNDCHV 192
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+V+D+ + +++FD G++ K +G G P + + N V+V+D+
Sbjct: 193 VVTDAGDRSLKVFDFFGQI---------KL-VLG---GHFCLPWGVETTPQNGVLVTDAE 239
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYISV-------GDSGNNRIQ 270
+ + +V+ +E + L+ PRGVAV G I+V G + ++
Sbjct: 240 AGSLHLLEVDFPEGVLRRTERLQ-AHLRHPRGVAVSWLTGAIAVLEHPLGPGACSSTTVK 298
Query: 271 IFTPDGQFLRAFGCWGSG---DGEFKGLEGVAVMSNGNILVCD 310
+F+ Q + +G + VA GN++V D
Sbjct: 299 VFSASMQLIGQVDSFGLSLFFPSKITA-SAVAFDHQGNVVVAD 340
>MGI|MGI:1914116 [details] [associations]
symbol:Nhlrc2 "NHL repeat containing 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001258 Pfam:PF01436 InterPro:IPR000033
MGI:MGI:1914116 Gene3D:2.120.10.30 InterPro:IPR011042 SMART:SM00135
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
PROSITE:PS51352 PROSITE:PS51125 eggNOG:COG0526 EMBL:AK033384
EMBL:BC041104 EMBL:BC095956 IPI:IPI00227730 RefSeq:NP_080087.1
UniGene:Mm.392509 UniGene:Mm.46346 ProteinModelPortal:Q8BZW8
SMR:Q8BZW8 PhosphoSite:Q8BZW8 PaxDb:Q8BZW8 PRIDE:Q8BZW8
Ensembl:ENSMUST00000071423 GeneID:66866 KEGG:mmu:66866 CTD:374354
GeneTree:ENSGT00390000015483 HOVERGEN:HBG059736 InParanoid:Q8BZW8
OMA:SCLFVAD OrthoDB:EOG4W6NVH NextBio:322863 Bgee:Q8BZW8
CleanEx:MM_NHLRC2 Genevestigator:Q8BZW8 Uniprot:Q8BZW8
Length = 725
Score = 102 (41.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/94 (24%), Positives = 49/94 (52%)
Query: 143 QLEHPHYIAVSNTNRVI-VSDSNNHRVQIFDVNGRVFQS-DGTFVGKFGSMGNKAGQLEH 200
+L+HP +A +V+ V+DS NH++++ D + + GT S
Sbjct: 473 KLQHPLGVAWDEERQVLYVADSYNHKIKVVDPKTKGCTTLAGTGDASDASSSFAESAFNE 532
Query: 201 PHYIAVSNTNRVI-VSDSNNHRVQIFDVNGRVIT 233
P + + + R++ V+D+NNH++++ D+ R ++
Sbjct: 533 PGGLCIGESGRLLYVADTNNHQIKVMDLEARTVS 566
Score = 75 (31.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 29/120 (24%), Positives = 55/120 (45%)
Query: 32 RSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVG-PDNSIVVADSSNHRVQVCFPHFDLKT 90
R Q ++ ++ K+ P +P +AV +VVAD+ +HR+ V + +++
Sbjct: 201 RGQ-IRDGKIGIKLFKESLPPSPLLFPGKVAVDHATGRLVVADTGHHRILVIQKNGRIQS 259
Query: 91 NC----------VFL--AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMG 138
+ +F +F P+G+A+ DN I VAD+ NH ++ + V +G
Sbjct: 260 SIGGPNPGRKDGMFSESSFNSPQGVAIA-DNVIYVADTENHLIRKIDLEAEKVTTVAGVG 318
>UNIPROTKB|O05871 [details] [associations]
symbol:pknD "Serine/threonine-protein kinase PknD"
species:1773 "Mycobacterium tuberculosis" [GO:0004672 "protein
kinase activity" evidence=IDA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IDA] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005887 "integral to plasma
membrane" evidence=IDA] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0016036 "cellular response to phosphate starvation"
evidence=IDA] [GO:0030145 "manganese ion binding" evidence=IDA]
[GO:0032091 "negative regulation of protein binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0043085 "positive regulation of catalytic activity"
evidence=IDA] [GO:0043086 "negative regulation of catalytic
activity" evidence=IDA] [GO:0045717 "negative regulation of fatty
acid biosynthetic process" evidence=IDA] InterPro:IPR000719
InterPro:IPR001258 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 Pfam:PF01436 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 GO:GO:0005829 GO:GO:0005524
GO:GO:0005618 GO:GO:0043085 GO:GO:0005576 GO:GO:0009405
GO:GO:0005887 EMBL:BX842575 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR eggNOG:COG0515 Gene3D:2.120.10.30
InterPro:IPR011042 SUPFAM:SSF56112 GO:GO:0004674 BRENDA:2.7.11.1
GO:GO:0030145 GO:GO:0045717 GO:GO:0032091 GO:GO:0016036
GO:GO:0043086 InterPro:IPR013017 PROSITE:PS51125 KO:K08884
EMBL:X99618 PIR:C70584 RefSeq:NP_215446.1 RefSeq:NP_335391.1
RefSeq:YP_006514287.1 PDB:1RWI PDB:1RWL PDBsum:1RWI PDBsum:1RWL
ProteinModelPortal:O05871 SMR:O05871 IntAct:O05871
PhosSite:P0603130 PRIDE:O05871 EnsemblBacteria:EBMYCT00000003375
EnsemblBacteria:EBMYCT00000072823 GeneID:13318839 GeneID:885607
GeneID:926274 KEGG:mtc:MT0958 KEGG:mtu:Rv0931c KEGG:mtv:RVBD_0931c
PATRIC:18123850 TubercuList:Rv0931c HOGENOM:HOG000050426
OMA:RIDTHGI ProtClustDB:CLSK790840 EvolutionaryTrace:O05871
Uniprot:O05871
Length = 664
Score = 135 (52.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 48/160 (30%), Positives = 70/160 (43%)
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 217
V V + N V + GRV + G G+ L P +AV V V+D
Sbjct: 431 VAVDSAGNVYVTSEGMYGRVVK---LATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF 487
Query: 218 NNHRVQIF-DVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDG 276
NN V + N + + F +G L +P G+AVD QG + V D GNNR+
Sbjct: 488 NNRVVTLAAGSNNQTVLPF------DG-LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS 540
Query: 277 QFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRI 316
+ G D + GVAV ++GN+ V D +N+R+
Sbjct: 541 KTQTVLPFTGLNDPD-----GVAVDNSGNVYVTDTDNNRV 575
Score = 38 (18.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 6/35 (17%), Positives = 15/35 (42%)
Query: 124 FQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
+ + F + + AG+L PH + + + +
Sbjct: 50 YSDNAVFRARMQREADTAGRLTEPHIVPIHDYGEI 84
>MGI|MGI:2145264 [details] [associations]
symbol:Nhlrc1 "NHL repeat containing 1" species:10090 "Mus
musculus" [GO:0000209 "protein polyubiquitination" evidence=ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2145264
Prosite:PS00518 GO:GO:0005783 GO:GO:0005634 GO:GO:0048471
GO:GO:0043161 GO:GO:0046872 Gene3D:2.120.10.30 InterPro:IPR011042
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398
GO:GO:0004842 InterPro:IPR013017 PROSITE:PS51125 GO:GO:0000209
InterPro:IPR017907 GeneTree:ENSGT00550000074377 CTD:378884
eggNOG:NOG255948 HOGENOM:HOG000113780 HOVERGEN:HBG052617 KO:K10602
OMA:PRNLPCG OrthoDB:EOG44QT1H EMBL:BK001499 EMBL:AK045746
IPI:IPI00224007 RefSeq:NP_780549.1 UniGene:Mm.25593
ProteinModelPortal:Q8BR37 SMR:Q8BR37 STRING:Q8BR37 PRIDE:Q8BR37
Ensembl:ENSMUST00000052747 GeneID:105193 KEGG:mmu:105193
InParanoid:Q8BR37 NextBio:357484 Bgee:Q8BR37 CleanEx:MM_NHLRC1
Genevestigator:Q8BR37 GermOnline:ENSMUSG00000044231 Uniprot:Q8BR37
Length = 401
Score = 128 (50.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 57/224 (25%), Positives = 101/224 (45%)
Query: 100 PRGIAVGPDNS-IVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P G+A+ P +VV RV++F S G +FG G+ A +++P +AV+N V
Sbjct: 131 PTGLALCPKTGRVVVVHDGKRRVKIFDSGGGGAHQFGEKGDAAHDVKYPLDVAVTNDCHV 190
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+V+D+ + +++FD G++ VGK Q P + ++ N V+V+D+
Sbjct: 191 VVTDAGDCSLKVFDFFGQI----KLVVGK---------QFSLPWGVEITPHNGVLVTDAE 237
Query: 219 NHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDD-QGYISV-------GDSG--NNR 268
+ + + + E + L PRG+AV G I+V G +G N R
Sbjct: 238 AGTLHLLEADFPEGVLRRIERLQ-AHLCSPRGLAVSWLTGAIAVLEHPCAFGRTGCNNTR 296
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSN--GNILVCD 310
+++F Q + +G + AV + GN++V D
Sbjct: 297 VKVFNSTMQLIGQVDSFGLNLLFPSKVTASAVTFDHQGNVIVAD 340
>UNIPROTKB|F1RN59 [details] [associations]
symbol:PAM "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016020 "membrane" evidence=IEA] [GO:0006518 "peptide
metabolic process" evidence=IEA] [GO:0005507 "copper ion binding"
evidence=IEA] [GO:0004504 "peptidylglycine monooxygenase activity"
evidence=IEA] InterPro:IPR000323 InterPro:IPR000720
InterPro:IPR001258 InterPro:IPR008977 InterPro:IPR014783
InterPro:IPR014784 InterPro:IPR020611 Pfam:PF01082 Pfam:PF01436
PRINTS:PR00790 PROSITE:PS00084 PROSITE:PS00085 GO:GO:0016020
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0005507 GO:GO:0006518
GeneTree:ENSGT00530000063085 GO:GO:0004504 Gene3D:2.60.120.230
Gene3D:2.60.120.310 InterPro:IPR013017 SUPFAM:SSF49742
PROSITE:PS51125 OMA:DTVHHML EMBL:CU915548
Ensembl:ENSSSCT00000015497 Uniprot:F1RN59
Length = 983
Score = 131 (51.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 41/131 (31%), Positives = 65/131 (49%)
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGR-----VITSFGSEGSEEGQLKFPRGVAVD- 254
PH +++ V+D H+V D + + ++ GS++ P VAVD
Sbjct: 590 PHGLSIDKDGNYWVTDVALHQVFKLDPDSKEAPLLILGQSMQPGSDQNHFCQPTDVAVDP 649
Query: 255 DQGYISVGDSG-NNRIQIFTPDGQFLRAFGCWGSGD----GEFKGLEGVAVMSN-GNILV 308
D G I V D N+RI F+P G+++ +G +GD G+F +A++ + G + V
Sbjct: 650 DTGTIYVSDGYCNSRIVQFSPSGKYITQWGEESTGDSPKPGQFSVPHSLALVPHLGQLCV 709
Query: 309 CDRENHRIQVF 319
DREN RIQ F
Sbjct: 710 ADRENGRIQCF 720
Score = 131 (51.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 58/246 (23%), Positives = 99/246 (40%)
Query: 48 RGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLA----------- 96
+ S F P G+++ D + V D + H+V P D K + +
Sbjct: 580 QSSGKNLFYLPHGLSIDKDGNYWVTDVALHQVFKLDP--DSKEAPLLILGQSMQPGSDQN 637
Query: 97 -FTWPRGIAVGPDN-SIVVADS-SNHRVQVFQSDGTFVGKFG--SMGN--KAGQLEHPHY 149
F P +AV PD +I V+D N R+ F G ++ ++G S G+ K GQ PH
Sbjct: 638 HFCQPTDVAVDPDTGTIYVSDGYCNSRIVQFSPSGKYITQWGEESTGDSPKPGQFSVPHS 697
Query: 150 IA-VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSN 208
+A V + ++ V+D N R+Q F + + F + K S G + + + +
Sbjct: 698 LALVPHLGQLCVADRENGRIQCFKTDTKEFVREI----KHASFGRNVFAISYVSGLLFAV 753
Query: 209 TNRVIVSDSNNHRVQIFDV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+ D + + + NG +I F P + + G + VGD+ N
Sbjct: 754 NGKPYFEDQEPVQGFVMNFSNGEIIDVFKPVRKH---FDMPHDITASEDGTVFVGDAHTN 810
Query: 268 RIQIFT 273
+ FT
Sbjct: 811 TVWKFT 816
Score = 119 (46.9 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 47/176 (26%), Positives = 75/176 (42%)
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
PH +++ V+D H+V D + + ++ +G+ G+ P +AV
Sbjct: 590 PHGLSIDKDGNYWVTDVALHQVFKLDPDSK--EAPLLILGQSMQPGSDQNHFCQPTDVAV 647
Query: 207 S-NTNRVIVSDSN-NHRVQIFDVNGRVITSFGSEGSEE----GQLKFPRGVA-VDDQGYI 259
+T + VSD N R+ F +G+ IT +G E + + GQ P +A V G +
Sbjct: 648 DPDTGTIYVSDGYCNSRIVQFSPSGKYITQWGEESTGDSPKPGQFSVPHSLALVPHLGQL 707
Query: 260 SVGDSGNNRIQIFTPDG-QFLRAFGCWGSGDGEF--KGLEGVAVMSNGNILVCDRE 312
V D N RIQ F D +F+R G F + G+ NG D+E
Sbjct: 708 CVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYVSGLLFAVNGKPYFEDQE 763
Score = 46 (21.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 22/81 (27%), Positives = 37/81 (45%)
Query: 52 PGCFTWP---RGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWP-RGIAVGP 107
PG + P G+A+ P N++V+ +H FD K F + RG+
Sbjct: 514 PGVYLLPGQVSGVALDPKNNLVIFHRGDHVWDG--NSFDSK-------FVYQQRGLGPIE 564
Query: 108 DNSIVVADSSNHRVQVFQSDG 128
+++I+V D ++ V QS G
Sbjct: 565 EDTILVIDPNS--AAVLQSSG 583
>UNIPROTKB|E2R682 [details] [associations]
symbol:PAM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0006518
"peptide metabolic process" evidence=IEA] [GO:0005507 "copper ion
binding" evidence=IEA] [GO:0004504 "peptidylglycine monooxygenase
activity" evidence=IEA] InterPro:IPR000720 InterPro:IPR001258
InterPro:IPR008977 InterPro:IPR014783 InterPro:IPR014784
Pfam:PF01436 PRINTS:PR00790 PROSITE:PS00085 GO:GO:0016020
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0005507 GO:GO:0006518
GO:GO:0004504 Gene3D:2.60.120.230 InterPro:IPR013017
SUPFAM:SSF49742 PROSITE:PS51125 Ensembl:ENSCAFT00000012156
Uniprot:E2R682
Length = 679
Score = 130 (50.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 45/131 (34%), Positives = 63/131 (48%)
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVN--GRVITSFGSE---GSEEGQLKFPRGVAVD- 254
PH ++V V+D H+V D N G + + G GS++ P VAVD
Sbjct: 353 PHGLSVDKDGNYWVTDVALHQVFKLDPNSKGGPLLTLGRSMQPGSDQNHFCQPTDVAVDP 412
Query: 255 DQGYISVGDSG-NNRIQIFTPDGQFLRAFGCWGSGD----GEFKGLEGVAVMSN-GNILV 308
D G I V D N+RI F+P G F+ +G S G+F +A++ + G + V
Sbjct: 413 DTGTIYVSDGYCNSRIVQFSPTGNFITQWGEESSRSNPKPGQFSVPHSLALVPHLGQLCV 472
Query: 309 CDRENHRIQVF 319
DREN RIQ F
Sbjct: 473 ADRENGRIQCF 483
Score = 129 (50.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 61/245 (24%), Positives = 98/245 (40%)
Query: 48 RGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHF----------DLKTNCVFLAF 97
+ S F P G++V D + V D + H+V P+ ++ F
Sbjct: 343 QSSGKNLFYLPHGLSVDKDGNYWVTDVALHQVFKLDPNSKGGPLLTLGRSMQPGSDQNHF 402
Query: 98 TWPRGIAVGPDN-SIVVADS-SNHRVQVFQSDGTFVGKFG---SMGN-KAGQLEHPHYIA 151
P +AV PD +I V+D N R+ F G F+ ++G S N K GQ PH +A
Sbjct: 403 CQPTDVAVDPDTGTIYVSDGYCNSRIVQFSPTGNFITQWGEESSRSNPKPGQFSVPHSLA 462
Query: 152 -VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
V + ++ V+D N R+Q F + + F + K S G + + + +
Sbjct: 463 LVPHLGQLCVADRENGRIQCFKTDTKEFVREI----KHASFGRNVFAISYIPGLLFAVNG 518
Query: 211 RVIVSDSNNHRVQIFDVN---GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+ D VQ F +N G +I F P +A + G + VGD+ N
Sbjct: 519 KPYFGDQEP--VQGFVMNFSSGEIIDVFKPVRKH---FDMPHDIAASEDGTVYVGDAHTN 573
Query: 268 RIQIF 272
+ F
Sbjct: 574 TVWKF 578
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 73/270 (27%), Positives = 105/270 (38%)
Query: 57 WPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWP-RGIAVGPDNSIV 112
WP G+ + P S V D+ N+ V F D N F + RG+ +++I+
Sbjct: 276 WP-GVYLLPGQVSGVALDAKNNLV--IFHRGDHVWDGNSFDSMFVYQQRGLGPIEEDTIL 332
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 172
V D +N V QS G + PH ++V V+D H+V D
Sbjct: 333 VIDPNN--AAVLQSSGKNLFYL------------PHGLSVDKDGNYWVTDVALHQVFKLD 378
Query: 173 VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSN-NHRVQIFDVNGR 230
N + +G+ G+ P +AV +T + VSD N R+ F G
Sbjct: 379 PNSK--GGPLLTLGRSMQPGSDQNHFCQPTDVAVDPDTGTIYVSDGYCNSRIVQFSPTGN 436
Query: 231 VITSFGSEGSEE----GQLKFPRGVA-VDDQGYISVGDSGNNRIQIFTPDG-QFLRAFGC 284
IT +G E S GQ P +A V G + V D N RIQ F D +F+R
Sbjct: 437 FITQWGEESSRSNPKPGQFSVPHSLALVPHLGQLCVADRENGRIQCFKTDTKEFVREIKH 496
Query: 285 WGSGDGEF--KGLEGVAVMSNGNILVCDRE 312
G F + G+ NG D+E
Sbjct: 497 ASFGRNVFAISYIPGLLFAVNGKPYFGDQE 526
>UNIPROTKB|F6X870 [details] [associations]
symbol:PAM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0006518
"peptide metabolic process" evidence=IEA] [GO:0005507 "copper ion
binding" evidence=IEA] [GO:0004504 "peptidylglycine monooxygenase
activity" evidence=IEA] InterPro:IPR000720 InterPro:IPR001258
InterPro:IPR008977 InterPro:IPR014783 InterPro:IPR014784
Pfam:PF01436 PRINTS:PR00790 PROSITE:PS00085 GO:GO:0016020
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0005507 GO:GO:0006518
GeneTree:ENSGT00530000063085 GO:GO:0004504 Gene3D:2.60.120.230
InterPro:IPR013017 SUPFAM:SSF49742 PROSITE:PS51125
EMBL:AAEX03002013 Ensembl:ENSCAFT00000012156 Uniprot:F6X870
Length = 807
Score = 130 (50.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 45/131 (34%), Positives = 63/131 (48%)
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVN--GRVITSFGSE---GSEEGQLKFPRGVAVD- 254
PH ++V V+D H+V D N G + + G GS++ P VAVD
Sbjct: 414 PHGLSVDKDGNYWVTDVALHQVFKLDPNSKGGPLLTLGRSMQPGSDQNHFCQPTDVAVDP 473
Query: 255 DQGYISVGDSG-NNRIQIFTPDGQFLRAFGCWGSGD----GEFKGLEGVAVMSN-GNILV 308
D G I V D N+RI F+P G F+ +G S G+F +A++ + G + V
Sbjct: 474 DTGTIYVSDGYCNSRIVQFSPTGNFITQWGEESSRSNPKPGQFSVPHSLALVPHLGQLCV 533
Query: 309 CDRENHRIQVF 319
DREN RIQ F
Sbjct: 534 ADRENGRIQCF 544
Score = 129 (50.5 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 61/245 (24%), Positives = 98/245 (40%)
Query: 48 RGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHF----------DLKTNCVFLAF 97
+ S F P G++V D + V D + H+V P+ ++ F
Sbjct: 404 QSSGKNLFYLPHGLSVDKDGNYWVTDVALHQVFKLDPNSKGGPLLTLGRSMQPGSDQNHF 463
Query: 98 TWPRGIAVGPDN-SIVVADS-SNHRVQVFQSDGTFVGKFG---SMGN-KAGQLEHPHYIA 151
P +AV PD +I V+D N R+ F G F+ ++G S N K GQ PH +A
Sbjct: 464 CQPTDVAVDPDTGTIYVSDGYCNSRIVQFSPTGNFITQWGEESSRSNPKPGQFSVPHSLA 523
Query: 152 -VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
V + ++ V+D N R+Q F + + F + K S G + + + +
Sbjct: 524 LVPHLGQLCVADRENGRIQCFKTDTKEFVREI----KHASFGRNVFAISYIPGLLFAVNG 579
Query: 211 RVIVSDSNNHRVQIFDVN---GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+ D VQ F +N G +I F P +A + G + VGD+ N
Sbjct: 580 KPYFGDQEP--VQGFVMNFSSGEIIDVFKPVRKH---FDMPHDIAASEDGTVYVGDAHTN 634
Query: 268 RIQIF 272
+ F
Sbjct: 635 TVWKF 639
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 73/270 (27%), Positives = 105/270 (38%)
Query: 57 WPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWP-RGIAVGPDNSIV 112
WP G+ + P S V D+ N+ V F D N F + RG+ +++I+
Sbjct: 337 WP-GVYLLPGQVSGVALDAKNNLV--IFHRGDHVWDGNSFDSMFVYQQRGLGPIEEDTIL 393
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 172
V D +N V QS G + PH ++V V+D H+V D
Sbjct: 394 VIDPNN--AAVLQSSGKNLFYL------------PHGLSVDKDGNYWVTDVALHQVFKLD 439
Query: 173 VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSN-NHRVQIFDVNGR 230
N + +G+ G+ P +AV +T + VSD N R+ F G
Sbjct: 440 PNSK--GGPLLTLGRSMQPGSDQNHFCQPTDVAVDPDTGTIYVSDGYCNSRIVQFSPTGN 497
Query: 231 VITSFGSEGSEE----GQLKFPRGVA-VDDQGYISVGDSGNNRIQIFTPDG-QFLRAFGC 284
IT +G E S GQ P +A V G + V D N RIQ F D +F+R
Sbjct: 498 FITQWGEESSRSNPKPGQFSVPHSLALVPHLGQLCVADRENGRIQCFKTDTKEFVREIKH 557
Query: 285 WGSGDGEF--KGLEGVAVMSNGNILVCDRE 312
G F + G+ NG D+E
Sbjct: 558 ASFGRNVFAISYIPGLLFAVNGKPYFGDQE 587
>UNIPROTKB|F1MZN4 [details] [associations]
symbol:PAM "Peptidylglycine alpha-hydroxylating
monooxygenase" species:9913 "Bos taurus" [GO:0016020 "membrane"
evidence=IEA] [GO:0006518 "peptide metabolic process" evidence=IEA]
[GO:0005507 "copper ion binding" evidence=IEA] [GO:0004504
"peptidylglycine monooxygenase activity" evidence=IEA]
InterPro:IPR000323 InterPro:IPR000720 InterPro:IPR001258
InterPro:IPR008977 InterPro:IPR014783 InterPro:IPR014784
InterPro:IPR020611 Pfam:PF01082 Pfam:PF01436 PRINTS:PR00790
PROSITE:PS00084 PROSITE:PS00085 GO:GO:0016020 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0005507 GO:GO:0006518
GeneTree:ENSGT00530000063085 GO:GO:0004504 Gene3D:2.60.120.230
Gene3D:2.60.120.310 InterPro:IPR013017 SUPFAM:SSF49742
PROSITE:PS51125 EMBL:DAAA02021477 EMBL:DAAA02021478
EMBL:DAAA02021479 EMBL:DAAA02021480 EMBL:DAAA02021481
EMBL:DAAA02021482 IPI:IPI00694904 Ensembl:ENSBTAT00000016445
ArrayExpress:F1MZN4 Uniprot:F1MZN4
Length = 954
Score = 120 (47.3 bits), Expect = 0.00052, P = 0.00052
Identities = 50/187 (26%), Positives = 79/187 (42%)
Query: 97 FTWPRGIAVGPDN-SIVVADS-SNHRVQVFQSDGTFVGKFG--SMGN--KAGQLEHPHYI 150
F P +AV PD +I V+D N R+ F G F+ ++G S+ + K GQ PH +
Sbjct: 630 FCQPTDVAVDPDTGTIYVSDGYCNSRLVQFSPSGKFITQWGEASLESSPKPGQFRVPHSL 689
Query: 151 A-VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
A V ++ V+D N R+Q F + + F + K S G + + + +
Sbjct: 690 ALVPPLGQLCVADRENGRIQCFKTDTKEFVREI----KHPSFGRNVFAISYIPGLLFAVN 745
Query: 210 NRVIVSDSNNHRVQIFDVN---GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
+ D VQ F +N G +I F P +A + G + VGD+
Sbjct: 746 GKPYFEDQEP--VQGFVMNFSSGEIIDVFKPVRKH---FDMPHDIAASEDGTVYVGDAHT 800
Query: 267 NRIQIFT 273
N + FT
Sbjct: 801 NTVWKFT 807
Score = 117 (46.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 43/131 (32%), Positives = 64/131 (48%)
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVN---GRVITSFGS--EGSEEGQLKFPRGVAVD- 254
PH +++ V+D H+V D G ++T S GS++ P VAVD
Sbjct: 581 PHGLSIDKDGNYWVTDVALHQVFKLDPKSKEGPLLTLGRSMQPGSDQNHFCQPTDVAVDP 640
Query: 255 DQGYISVGDSG-NNRIQIFTPDGQFLRAFG--CWGSGD--GEFKGLEGVAVMSN-GNILV 308
D G I V D N+R+ F+P G+F+ +G S G+F+ +A++ G + V
Sbjct: 641 DTGTIYVSDGYCNSRLVQFSPSGKFITQWGEASLESSPKPGQFRVPHSLALVPPLGQLCV 700
Query: 309 CDRENHRIQVF 319
DREN RIQ F
Sbjct: 701 ADRENGRIQCF 711
Score = 116 (45.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 40/142 (28%), Positives = 64/142 (45%)
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
PH +++ V+D H Q+F ++ + + +G+ G+ P +AV
Sbjct: 581 PHGLSIDKDGNYWVTDVALH--QVFKLDPKSKEGPLLTLGRSMQPGSDQNHFCQPTDVAV 638
Query: 207 S-NTNRVIVSDSN-NHRVQIFDVNGRVITSFGSEGSEE----GQLKFPRGVA-VDDQGYI 259
+T + VSD N R+ F +G+ IT +G E GQ + P +A V G +
Sbjct: 639 DPDTGTIYVSDGYCNSRLVQFSPSGKFITQWGEASLESSPKPGQFRVPHSLALVPPLGQL 698
Query: 260 SVGDSGNNRIQIFTPDG-QFLR 280
V D N RIQ F D +F+R
Sbjct: 699 CVADRENGRIQCFKTDTKEFVR 720
Score = 58 (25.5 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 17/83 (20%), Positives = 35/83 (42%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
G+A+ P N++V+ +H V+ + +F KF G +E + + N ++
Sbjct: 516 GVALDPQNNLVIFHRGDH---VWDGN-SFDSKFVYQQRGLGPIEEDTILVIDPNNAAVLQ 571
Query: 162 DSNNHRVQIFDVNGRVFQSDGTF 184
S + + +G DG +
Sbjct: 572 SSGKNLFYL--PHGLSIDKDGNY 592
Score = 52 (23.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 23/81 (28%), Positives = 37/81 (45%)
Query: 52 PGCFTWP---RGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWP-RGIAVGP 107
PG + P G+A+ P N++V+ +H FD K F + RG+
Sbjct: 505 PGVYLLPGQVSGVALDPQNNLVIFHRGDHVWDG--NSFDSK-------FVYQQRGLGPIE 555
Query: 108 DNSIVVADSSNHRVQVFQSDG 128
+++I+V D +N V QS G
Sbjct: 556 EDTILVIDPNN--AAVLQSSG 574
>MGI|MGI:97475 [details] [associations]
symbol:Pam "peptidylglycine alpha-amidating monooxygenase"
species:10090 "Mus musculus" [GO:0001519 "peptide amidation"
evidence=ISO] [GO:0001676 "long-chain fatty acid metabolic process"
evidence=ISO] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004497 "monooxygenase activity" evidence=IEA] [GO:0004504
"peptidylglycine monooxygenase activity" evidence=ISO;TAS]
[GO:0004598 "peptidylamidoglycolate lyase activity" evidence=ISO]
[GO:0005507 "copper ion binding" evidence=ISO] [GO:0005509 "calcium
ion binding" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005802 "trans-Golgi network" evidence=ISO]
[GO:0005829 "cytosol" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006518 "peptide
metabolic process" evidence=ISO;TAS] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=ISO]
[GO:0009268 "response to pH" evidence=ISO] [GO:0009404 "toxin
metabolic process" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016715 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, reduced ascorbate as one donor, and incorporation
of one atom of oxygen" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0018032 "protein amidation" evidence=ISO]
[GO:0019538 "protein metabolic process" evidence=ISO] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0030141 "secretory
granule" evidence=ISO] [GO:0030667 "secretory granule membrane"
evidence=ISO] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031418 "L-ascorbic acid binding" evidence=IEA] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=ISO]
[GO:0042493 "response to drug" evidence=ISO] [GO:0043005 "neuron
projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043204 "perikaryon" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO] [GO:0050708 "regulation of protein
secretion" evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO;TAS] InterPro:IPR000323 InterPro:IPR000720
InterPro:IPR001258 InterPro:IPR008977 InterPro:IPR014783
InterPro:IPR014784 InterPro:IPR020611 Pfam:PF01082 Pfam:PF01436
PRINTS:PR00790 PROSITE:PS00084 PROSITE:PS00085 MGI:MGI:97475
GO:GO:0005829 GO:GO:0007507 GO:GO:0005887 GO:GO:0042493
GO:GO:0032355 GO:GO:0043204 GO:GO:0030141 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0001666 GO:GO:0051384 GO:GO:0007417
GO:GO:0005507 GO:GO:0009268 GO:GO:0046688 GO:GO:0031418
GO:GO:0006518 eggNOG:COG3391 GeneTree:ENSGT00530000063085 KO:K00504
GO:GO:0004598 GO:GO:0004504 Gene3D:2.60.120.230 Gene3D:2.60.120.310
InterPro:IPR013017 SUPFAM:SSF49742 PROSITE:PS51125 CTD:5066
HOGENOM:HOG000293368 HOVERGEN:HBG004218 GO:GO:0030658 OMA:DTVHHML
ChiTaRS:PAM GO:GO:0060173 EMBL:U79523 EMBL:AC102191 EMBL:AC157923
IPI:IPI00323974 RefSeq:NP_038654.2 UniGene:Mm.441453
UniGene:Mm.5121 ProteinModelPortal:P97467 SMR:P97467 IntAct:P97467
STRING:P97467 PhosphoSite:P97467 PaxDb:P97467 PRIDE:P97467
DNASU:18484 Ensembl:ENSMUST00000058762 GeneID:18484 KEGG:mmu:18484
UCSC:uc007cfo.1 InParanoid:P97467 NextBio:294198 Bgee:P97467
CleanEx:MM_PAM Genevestigator:P97467 GermOnline:ENSMUSG00000026335
Uniprot:P97467
Length = 979
Score = 130 (50.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 61/247 (24%), Positives = 99/247 (40%)
Query: 48 RGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHF----------DLKTNCVFLAF 97
+ S F P G+++ D + V D + H+V P ++ F
Sbjct: 574 QSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLEPRSKEGPLLVLGRSMQPGSDQNHF 633
Query: 98 TWPRGIAVGPDNSIV-VADS-SNHRVQVFQSDGTFVGKFG--SMGN--KAGQLEHPHYIA 151
P +AV P V V+D N R+ F G F+ ++G S G+ K GQ PH +A
Sbjct: 634 CQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFITQWGEESSGSSPKPGQFSVPHSLA 693
Query: 152 -VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH-PHYIAVSNT 209
V + N++ V+D N R+Q F + + F + K S G + + P ++ N
Sbjct: 694 LVPHLNQLCVADRENGRIQCFKTDTKEFVREI----KHASFGRNVFAISYIPGFLFAVN- 748
Query: 210 NRVIVSDSNNHRVQIFDVN---GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
+ D VQ F +N G +I F P + + G + +GD+
Sbjct: 749 GKPYFGDQEP--VQGFVMNFSSGEIIDVFKPVRKH---FDMPHDIVASEDGTVYIGDAHT 803
Query: 267 NRIQIFT 273
N + FT
Sbjct: 804 NTVWKFT 810
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 64/236 (27%), Positives = 99/236 (41%)
Query: 57 WPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWP-RGIAVGPDNSIV 112
WP G+ + P S V DS N+ V F D N F + RG+ +++I+
Sbjct: 507 WP-GVYLLPGQVSGVALDSKNNLV--IFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTIL 563
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 172
V D + + ++ QS G + PH +++ V+D H Q+F
Sbjct: 564 VIDPN--KAEILQSSGKNLFYL------------PHGLSIDTDGNYWVTDVALH--QVFK 607
Query: 173 VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSN-NHRVQIFDVNGR 230
+ R + +G+ G+ P +AV +T V VSD N R+ F +G+
Sbjct: 608 LEPRSKEGPLLVLGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK 667
Query: 231 VITSFGSEGS----EEGQLKFPRGVA-VDDQGYISVGDSGNNRIQIFTPDG-QFLR 280
IT +G E S + GQ P +A V + V D N RIQ F D +F+R
Sbjct: 668 FITQWGEESSGSSPKPGQFSVPHSLALVPHLNQLCVADRENGRIQCFKTDTKEFVR 723
>UNIPROTKB|F1MZB4 [details] [associations]
symbol:PAM "Peptidylglycine alpha-hydroxylating
monooxygenase" species:9913 "Bos taurus" [GO:0016020 "membrane"
evidence=IEA] [GO:0006518 "peptide metabolic process" evidence=IEA]
[GO:0005507 "copper ion binding" evidence=IEA] [GO:0004504
"peptidylglycine monooxygenase activity" evidence=IEA]
InterPro:IPR000323 InterPro:IPR000720 InterPro:IPR001258
InterPro:IPR008977 InterPro:IPR014783 InterPro:IPR014784
InterPro:IPR020611 Pfam:PF01082 Pfam:PF01436 PRINTS:PR00790
PROSITE:PS00084 PROSITE:PS00085 GO:GO:0016020 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0005507 GO:GO:0006518
GeneTree:ENSGT00530000063085 GO:GO:0004504 Gene3D:2.60.120.230
Gene3D:2.60.120.310 InterPro:IPR013017 SUPFAM:SSF49742
PROSITE:PS51125 IPI:IPI00842571 UniGene:Bt.12303 OMA:DTVHHML
EMBL:DAAA02021477 EMBL:DAAA02021478 EMBL:DAAA02021479
EMBL:DAAA02021480 EMBL:DAAA02021481 EMBL:DAAA02021482
Ensembl:ENSBTAT00000016466 ArrayExpress:F1MZB4 Uniprot:F1MZB4
Length = 972
Score = 120 (47.3 bits), Expect = 0.00054, P = 0.00054
Identities = 50/187 (26%), Positives = 79/187 (42%)
Query: 97 FTWPRGIAVGPDN-SIVVADS-SNHRVQVFQSDGTFVGKFG--SMGN--KAGQLEHPHYI 150
F P +AV PD +I V+D N R+ F G F+ ++G S+ + K GQ PH +
Sbjct: 630 FCQPTDVAVDPDTGTIYVSDGYCNSRLVQFSPSGKFITQWGEASLESSPKPGQFRVPHSL 689
Query: 151 A-VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
A V ++ V+D N R+Q F + + F + K S G + + + +
Sbjct: 690 ALVPPLGQLCVADRENGRIQCFKTDTKEFVREI----KHPSFGRNVFAISYIPGLLFAVN 745
Query: 210 NRVIVSDSNNHRVQIFDVN---GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
+ D VQ F +N G +I F P +A + G + VGD+
Sbjct: 746 GKPYFEDQEP--VQGFVMNFSSGEIIDVFKPVRKH---FDMPHDIAASEDGTVYVGDAHT 800
Query: 267 NRIQIFT 273
N + FT
Sbjct: 801 NTVWKFT 807
Score = 117 (46.2 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 43/131 (32%), Positives = 64/131 (48%)
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVN---GRVITSFGS--EGSEEGQLKFPRGVAVD- 254
PH +++ V+D H+V D G ++T S GS++ P VAVD
Sbjct: 581 PHGLSIDKDGNYWVTDVALHQVFKLDPKSKEGPLLTLGRSMQPGSDQNHFCQPTDVAVDP 640
Query: 255 DQGYISVGDSG-NNRIQIFTPDGQFLRAFG--CWGSGD--GEFKGLEGVAVMSN-GNILV 308
D G I V D N+R+ F+P G+F+ +G S G+F+ +A++ G + V
Sbjct: 641 DTGTIYVSDGYCNSRLVQFSPSGKFITQWGEASLESSPKPGQFRVPHSLALVPPLGQLCV 700
Query: 309 CDRENHRIQVF 319
DREN RIQ F
Sbjct: 701 ADRENGRIQCF 711
Score = 116 (45.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 40/142 (28%), Positives = 64/142 (45%)
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
PH +++ V+D H Q+F ++ + + +G+ G+ P +AV
Sbjct: 581 PHGLSIDKDGNYWVTDVALH--QVFKLDPKSKEGPLLTLGRSMQPGSDQNHFCQPTDVAV 638
Query: 207 S-NTNRVIVSDSN-NHRVQIFDVNGRVITSFGSEGSEE----GQLKFPRGVA-VDDQGYI 259
+T + VSD N R+ F +G+ IT +G E GQ + P +A V G +
Sbjct: 639 DPDTGTIYVSDGYCNSRLVQFSPSGKFITQWGEASLESSPKPGQFRVPHSLALVPPLGQL 698
Query: 260 SVGDSGNNRIQIFTPDG-QFLR 280
V D N RIQ F D +F+R
Sbjct: 699 CVADRENGRIQCFKTDTKEFVR 720
Score = 58 (25.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 17/83 (20%), Positives = 35/83 (42%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
G+A+ P N++V+ +H V+ + +F KF G +E + + N ++
Sbjct: 516 GVALDPQNNLVIFHRGDH---VWDGN-SFDSKFVYQQRGLGPIEEDTILVIDPNNAAVLQ 571
Query: 162 DSNNHRVQIFDVNGRVFQSDGTF 184
S + + +G DG +
Sbjct: 572 SSGKNLFYL--PHGLSIDKDGNY 592
Score = 52 (23.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 23/81 (28%), Positives = 37/81 (45%)
Query: 52 PGCFTWP---RGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWP-RGIAVGP 107
PG + P G+A+ P N++V+ +H FD K F + RG+
Sbjct: 505 PGVYLLPGQVSGVALDPQNNLVIFHRGDHVWDG--NSFDSK-------FVYQQRGLGPIE 555
Query: 108 DNSIVVADSSNHRVQVFQSDG 128
+++I+V D +N V QS G
Sbjct: 556 EDTILVIDPNN--AAVLQSSG 574
>UNIPROTKB|P10731 [details] [associations]
symbol:PAM "Peptidyl-glycine alpha-amidating monooxygenase"
species:9913 "Bos taurus" [GO:0030658 "transport vesicle membrane"
evidence=IEA] [GO:0004598 "peptidylamidoglycolate lyase activity"
evidence=IEA] [GO:0004504 "peptidylglycine monooxygenase activity"
evidence=IEA] [GO:0031418 "L-ascorbic acid binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006518
"peptide metabolic process" evidence=IEA] [GO:0005507 "copper ion
binding" evidence=IEA] InterPro:IPR000323 InterPro:IPR000720
InterPro:IPR001258 InterPro:IPR008977 InterPro:IPR014783
InterPro:IPR014784 InterPro:IPR020611 Pfam:PF01082 Pfam:PF01436
PRINTS:PR00790 PROSITE:PS00084 PROSITE:PS00085 GO:GO:0016021
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0005507 GO:GO:0031418
GO:GO:0006518 eggNOG:COG3391 KO:K00504 GO:GO:0004598 GO:GO:0004504
Gene3D:2.60.120.230 Gene3D:2.60.120.310 InterPro:IPR013017
SUPFAM:SSF49742 PROSITE:PS51125 EMBL:M18683 IPI:IPI00842571
PIR:A40063 RefSeq:NP_776373.1 UniGene:Bt.12303
ProteinModelPortal:P10731 SMR:P10731 MINT:MINT-1365422
STRING:P10731 PRIDE:P10731 GeneID:280890 KEGG:bta:280890 CTD:5066
HOGENOM:HOG000293368 HOVERGEN:HBG004218 InParanoid:P10731
OrthoDB:EOG46MBHT NextBio:20805024 GO:GO:0030658 Uniprot:P10731
Length = 972
Score = 120 (47.3 bits), Expect = 0.00054, P = 0.00054
Identities = 50/187 (26%), Positives = 79/187 (42%)
Query: 97 FTWPRGIAVGPDN-SIVVADS-SNHRVQVFQSDGTFVGKFG--SMGN--KAGQLEHPHYI 150
F P +AV PD +I V+D N R+ F G F+ ++G S+ + K GQ PH +
Sbjct: 630 FCQPTDVAVDPDTGTIYVSDGYCNSRLVQFSPSGKFITQWGEASLESSPKPGQFRVPHSL 689
Query: 151 A-VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
A V ++ V+D N R+Q F + + F + K S G + + + +
Sbjct: 690 ALVPPLGQLCVADRENGRIQCFKTDTKEFVREI----KHPSFGRNVFAISYIPGLLFAVN 745
Query: 210 NRVIVSDSNNHRVQIFDVN---GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGN 266
+ D VQ F +N G +I F P +A + G + VGD+
Sbjct: 746 GKPYFEDQEP--VQGFVMNFSSGEIIDVFKPVRKH---FDMPHDIAASEDGTVYVGDAHT 800
Query: 267 NRIQIFT 273
N + FT
Sbjct: 801 NTVWKFT 807
Score = 117 (46.2 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 43/131 (32%), Positives = 64/131 (48%)
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVN---GRVITSFGS--EGSEEGQLKFPRGVAVD- 254
PH +++ V+D H+V D G ++T S GS++ P VAVD
Sbjct: 581 PHGLSIDKDGNYWVTDVALHQVFKLDPKSKEGPLLTLGRSMQPGSDQNHFCQPTDVAVDP 640
Query: 255 DQGYISVGDSG-NNRIQIFTPDGQFLRAFG--CWGSGD--GEFKGLEGVAVMSN-GNILV 308
D G I V D N+R+ F+P G+F+ +G S G+F+ +A++ G + V
Sbjct: 641 DTGTIYVSDGYCNSRLVQFSPSGKFITQWGEASLESSPKPGQFRVPHSLALVPPLGQLCV 700
Query: 309 CDRENHRIQVF 319
DREN RIQ F
Sbjct: 701 ADRENGRIQCF 711
Score = 116 (45.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 40/142 (28%), Positives = 64/142 (45%)
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
PH +++ V+D H Q+F ++ + + +G+ G+ P +AV
Sbjct: 581 PHGLSIDKDGNYWVTDVALH--QVFKLDPKSKEGPLLTLGRSMQPGSDQNHFCQPTDVAV 638
Query: 207 S-NTNRVIVSDSN-NHRVQIFDVNGRVITSFGSEGSEE----GQLKFPRGVA-VDDQGYI 259
+T + VSD N R+ F +G+ IT +G E GQ + P +A V G +
Sbjct: 639 DPDTGTIYVSDGYCNSRLVQFSPSGKFITQWGEASLESSPKPGQFRVPHSLALVPPLGQL 698
Query: 260 SVGDSGNNRIQIFTPDG-QFLR 280
V D N RIQ F D +F+R
Sbjct: 699 CVADRENGRIQCFKTDTKEFVR 720
Score = 58 (25.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 17/83 (20%), Positives = 35/83 (42%)
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS 161
G+A+ P N++V+ +H V+ + +F KF G +E + + N ++
Sbjct: 516 GVALDPQNNLVIFHRGDH---VWDGN-SFDSKFVYQQRGLGPIEEDTILVIDPNNAAVLQ 571
Query: 162 DSNNHRVQIFDVNGRVFQSDGTF 184
S + + +G DG +
Sbjct: 572 SSGKNLFYL--PHGLSIDKDGNY 592
Score = 52 (23.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 23/81 (28%), Positives = 37/81 (45%)
Query: 52 PGCFTWP---RGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWP-RGIAVGP 107
PG + P G+A+ P N++V+ +H FD K F + RG+
Sbjct: 505 PGVYLLPGQVSGVALDPQNNLVIFHRGDHVWDG--NSFDSK-------FVYQQRGLGPIE 555
Query: 108 DNSIVVADSSNHRVQVFQSDG 128
+++I+V D +N V QS G
Sbjct: 556 EDTILVIDPNN--AAVLQSSG 574
>UNIPROTKB|F1Q4G4 [details] [associations]
symbol:PAM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0006518
"peptide metabolic process" evidence=IEA] [GO:0005507 "copper ion
binding" evidence=IEA] [GO:0004504 "peptidylglycine monooxygenase
activity" evidence=IEA] InterPro:IPR000323 InterPro:IPR000720
InterPro:IPR001258 InterPro:IPR008977 InterPro:IPR014783
InterPro:IPR014784 InterPro:IPR020611 Pfam:PF01082 Pfam:PF01436
PRINTS:PR00790 PROSITE:PS00084 PROSITE:PS00085 GO:GO:0016020
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0005507 GO:GO:0006518
GeneTree:ENSGT00530000063085 GO:GO:0004504 Gene3D:2.60.120.230
Gene3D:2.60.120.310 InterPro:IPR013017 SUPFAM:SSF49742
PROSITE:PS51125 OMA:DTVHHML EMBL:AAEX03002013
Ensembl:ENSCAFT00000012155 Uniprot:F1Q4G4
Length = 1017
Score = 130 (50.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 45/131 (34%), Positives = 63/131 (48%)
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVN--GRVITSFGSE---GSEEGQLKFPRGVAVD- 254
PH ++V V+D H+V D N G + + G GS++ P VAVD
Sbjct: 577 PHGLSVDKDGNYWVTDVALHQVFKLDPNSKGGPLLTLGRSMQPGSDQNHFCQPTDVAVDP 636
Query: 255 DQGYISVGDSG-NNRIQIFTPDGQFLRAFGCWGSGD----GEFKGLEGVAVMSN-GNILV 308
D G I V D N+RI F+P G F+ +G S G+F +A++ + G + V
Sbjct: 637 DTGTIYVSDGYCNSRIVQFSPTGNFITQWGEESSRSNPKPGQFSVPHSLALVPHLGQLCV 696
Query: 309 CDRENHRIQVF 319
DREN RIQ F
Sbjct: 697 ADRENGRIQCF 707
Score = 129 (50.5 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 61/245 (24%), Positives = 98/245 (40%)
Query: 48 RGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHF----------DLKTNCVFLAF 97
+ S F P G++V D + V D + H+V P+ ++ F
Sbjct: 567 QSSGKNLFYLPHGLSVDKDGNYWVTDVALHQVFKLDPNSKGGPLLTLGRSMQPGSDQNHF 626
Query: 98 TWPRGIAVGPDN-SIVVADS-SNHRVQVFQSDGTFVGKFG---SMGN-KAGQLEHPHYIA 151
P +AV PD +I V+D N R+ F G F+ ++G S N K GQ PH +A
Sbjct: 627 CQPTDVAVDPDTGTIYVSDGYCNSRIVQFSPTGNFITQWGEESSRSNPKPGQFSVPHSLA 686
Query: 152 -VSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN 210
V + ++ V+D N R+Q F + + F + K S G + + + +
Sbjct: 687 LVPHLGQLCVADRENGRIQCFKTDTKEFVREI----KHASFGRNVFAISYIPGLLFAVNG 742
Query: 211 RVIVSDSNNHRVQIFDVN---GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+ D VQ F +N G +I F P +A + G + VGD+ N
Sbjct: 743 KPYFGDQEP--VQGFVMNFSSGEIIDVFKPVRKH---FDMPHDIAASEDGTVYVGDAHTN 797
Query: 268 RIQIF 272
+ F
Sbjct: 798 TVWKF 802
Score = 122 (48.0 bits), Expect = 0.00034, P = 0.00034
Identities = 73/270 (27%), Positives = 105/270 (38%)
Query: 57 WPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWP-RGIAVGPDNSIV 112
WP G+ + P S V D+ N+ V F D N F + RG+ +++I+
Sbjct: 500 WP-GVYLLPGQVSGVALDAKNNLV--IFHRGDHVWDGNSFDSMFVYQQRGLGPIEEDTIL 556
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 172
V D +N V QS G + PH ++V V+D H+V D
Sbjct: 557 VIDPNN--AAVLQSSGKNLFYL------------PHGLSVDKDGNYWVTDVALHQVFKLD 602
Query: 173 VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSN-NHRVQIFDVNGR 230
N + +G+ G+ P +AV +T + VSD N R+ F G
Sbjct: 603 PNSK--GGPLLTLGRSMQPGSDQNHFCQPTDVAVDPDTGTIYVSDGYCNSRIVQFSPTGN 660
Query: 231 VITSFGSEGSEE----GQLKFPRGVA-VDDQGYISVGDSGNNRIQIFTPDG-QFLRAFGC 284
IT +G E S GQ P +A V G + V D N RIQ F D +F+R
Sbjct: 661 FITQWGEESSRSNPKPGQFSVPHSLALVPHLGQLCVADRENGRIQCFKTDTKEFVREIKH 720
Query: 285 WGSGDGEF--KGLEGVAVMSNGNILVCDRE 312
G F + G+ NG D+E
Sbjct: 721 ASFGRNVFAISYIPGLLFAVNGKPYFGDQE 750
>MGI|MGI:3687200 [details] [associations]
symbol:Nhlrc4 "NHL repeat containing 4" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001258 Pfam:PF01436 MGI:MGI:3687200
Gene3D:2.120.10.30 InterPro:IPR011042 InterPro:IPR013017
PROSITE:PS51125 EMBL:BC147284 EMBL:BC147285 EMBL:AK143822
IPI:IPI00620126 RefSeq:NP_001034127.1 UniGene:Mm.381070
ProteinModelPortal:Q3UP44 SMR:Q3UP44 PRIDE:Q3UP44
Ensembl:ENSMUST00000085027 GeneID:621239 KEGG:mmu:621239
UCSC:uc008bcu.1 CTD:283948 eggNOG:NOG264771
GeneTree:ENSGT00620000088309 HOGENOM:HOG000089960
HOVERGEN:HBG071856 InParanoid:Q3UP44 OMA:LGPTWEP OrthoDB:EOG4T782S
NextBio:415644 Bgee:Q3UP44 Genevestigator:Q3UP44 Uniprot:Q3UP44
Length = 136
Score = 101 (40.6 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 45 IGSRGSEPGC-FTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFL-AFTWPRG 102
+GS G+ G F P G+ + SI+VAD H+V + FP C+ L P G
Sbjct: 50 LGSLGTLTGHNFGHPAGVCSDAEGSIIVADEQRHQVTL-FPRVGPPI-CLQLEGLKRPLG 107
Query: 103 IAVGPDNSIVVADSSNHRVQVFQ 125
+A P +VVAD+ ++ ++++Q
Sbjct: 108 MACAPQGQLVVADAGDNCIKLYQ 130
>ZFIN|ZDB-GENE-060428-1 [details] [associations]
symbol:trim32 "tripartite motif-containing 32"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0070121
"Kupffer's vesicle development" evidence=IMP] [GO:0032402
"melanosome transport" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-060428-1
GO:GO:0046872 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070121
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907 GO:GO:0032402
CTD:22954 eggNOG:NOG269289 HOGENOM:HOG000120114 HOVERGEN:HBG060344
KO:K10607 OrthoDB:EOG4QZ7KF EMBL:BC154641 EMBL:BC171687
EMBL:BC171691 IPI:IPI00486048 RefSeq:NP_001107066.1
UniGene:Dr.73145 SMR:A8WGA9 STRING:A8WGA9 GeneID:562764
KEGG:dre:562764 NextBio:20884574 Uniprot:A8WGA9
Length = 663
Score = 130 (50.8 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 43/144 (29%), Positives = 65/144 (45%)
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG--RVITSFGSE--- 238
FV K G GN G P I V+ V+V+D N+R+QIF+ G R I S
Sbjct: 366 FVKKMGCKGNLPGMFNLPVSICVTLQGEVLVADRGNYRIQIFNRKGFQREIRRNPSSIDN 425
Query: 239 ------GSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEF 292
G++ L P +A+ QG I V D+ +N ++++T DG C +
Sbjct: 426 FVLSFLGADLPNL-IPLSIAITAQGLIGVTDNYDNSVKVYTTDGH------CIACHKNQL 478
Query: 293 KGLEGVAVMSNGNILVCDRENHRI 316
G+A M +G +V D E ++
Sbjct: 479 IKPWGIAAMPSGQFVVSDVEGGKL 502
Score = 37 (18.1 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 5 SEAKNINSCFLLQTLLVSGIGQVGTTPRSQYLQKRRLQFKI 45
+E + +N+ L + + I +V R YL R Q I
Sbjct: 209 AEIEKLNAQILEEQTYLLNIAEVQVVSRCDYLTMRIKQTDI 249
>UNIPROTKB|H7BYD9 [details] [associations]
symbol:PAM "Peptidyl-alpha-hydroxyglycine alpha-amidating
lyase" species:9606 "Homo sapiens" [GO:0004504 "peptidylglycine
monooxygenase activity" evidence=IEA] [GO:0005507 "copper ion
binding" evidence=IEA] [GO:0006518 "peptide metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR000720 InterPro:IPR001258 InterPro:IPR008977
InterPro:IPR014783 InterPro:IPR014784 Pfam:PF01436 PRINTS:PR00790
PROSITE:PS00085 GO:GO:0016020 Gene3D:2.120.10.30 InterPro:IPR011042
GO:GO:0005507 GO:GO:0006518 GO:GO:0004504 Gene3D:2.60.120.230
InterPro:IPR013017 SUPFAM:SSF49742 PROSITE:PS51125 EMBL:AC008779
EMBL:AC010250 EMBL:AC113373 HGNC:HGNC:8596 ChiTaRS:PAM
EMBL:AC008501 Ensembl:ENST00000379799 Uniprot:H7BYD9
Length = 679
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 43/131 (32%), Positives = 62/131 (47%)
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV--ITSFGSE---GSEEGQLKFPRGVAVDD 255
PH +++ V+D H+V D N + + G GS++ P VAVD
Sbjct: 354 PHGLSIDKDGNYWVTDVALHQVFKLDPNNKEGPVLILGRSMQPGSDQNHFCQPTDVAVDP 413
Query: 256 -QGYISVGDSG-NNRIQIFTPDGQFLRAFGCWGSGD----GEFKGLEGVAVMSN-GNILV 308
G I V D N+RI F+P G+F+ +G SG G+F +A++ G + V
Sbjct: 414 GTGAIYVSDGYCNSRIVQFSPSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCV 473
Query: 309 CDRENHRIQVF 319
DREN RIQ F
Sbjct: 474 ADRENGRIQCF 484
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 66/237 (27%), Positives = 98/237 (41%)
Query: 57 WPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWPRGIAVGP--DNSI 111
WP G+ + P S V D N+ V F D N F + + I +GP +++I
Sbjct: 277 WP-GVYLLPGQVSGVALDPKNNLV--IFHRGDHVWDGNSFDSKFVYQQ-IGLGPIEEDTI 332
Query: 112 VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
+V D +N V QS G + PH +++ V+D H+V
Sbjct: 333 LVIDPNN--AAVLQSSGKNLFYL------------PHGLSIDKDGNYWVTDVALHQVFKL 378
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSN-NHRVQIFDVNG 229
D N + + +G+ G+ P +AV T + VSD N R+ F +G
Sbjct: 379 DPNNK--EGPVLILGRSMQPGSDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFSPSG 436
Query: 230 RVITSFGSEGSEE----GQLKFPRGVA-VDDQGYISVGDSGNNRIQIFTPDG-QFLR 280
+ IT +G E S GQ P +A V G + V D N RIQ F D +F+R
Sbjct: 437 KFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVR 493
>UNIPROTKB|F1P141 [details] [associations]
symbol:NHLRC1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031398 "positive
regulation of protein ubiquitination" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001258 Pfam:PF01436
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005634 GO:GO:0048471 GO:GO:0043161 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842
InterPro:IPR013017 PROSITE:PS51125 GO:GO:0000209 InterPro:IPR017907
GeneTree:ENSGT00550000074377 OMA:PRNLPCG EMBL:AADN02027502
IPI:IPI00597159 Ensembl:ENSGALT00000020702 Uniprot:F1P141
Length = 391
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 29/99 (29%), Positives = 48/99 (48%)
Query: 196 GQLEHPHYIAVSN-TNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD 254
G L +P +A + R+ V+ R+ +F +G + FG G +K+P GVAV
Sbjct: 123 GSLLNPTGVAACRRSGRLAVAHDGKKRIHVFGPSGSCLQRFGERGDAGNDIKYPLGVAVT 182
Query: 255 DQGYISVGDSGNNRIQIFTPDGQ---FLRAFGC--WGSG 288
G++ V D G+ ++ F +G+ +R C WG G
Sbjct: 183 ADGHVVVTDGGDRSVKAFDFEGRGTLAVREGFCLPWGLG 221
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 53/237 (22%), Positives = 94/237 (39%)
Query: 44 KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGI 103
+ G RG +P G+AV D +VV D + V+ F T V F P G+
Sbjct: 162 RFGERGDAGNDIKYPLGVAVTADGHVVVTDGGDRSVKA-FDFEGRGTLAVREGFCLPWGL 220
Query: 104 AVGPDNSIVVADSSNHRVQVFQSD-GTFVGKFGSMGNKAGQLEHPHYIAV--SNTNRVIV 160
P+ ++V D+ + +D G+ GK +L +P +AV S+ V++
Sbjct: 221 GATPECDVMVTDAEAGALYRLTADFGS--GKLKKCQLVRSKLTNPRGVAVCPSSGAVVVI 278
Query: 161 SDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMG-NKAGQLE-HPHYIAVSNTNRVIVSDSN 218
++F SD T +G+ S G N + + +A ++V+D
Sbjct: 279 EHLKTEGPSSCSTRMKIFSSDMTLIGQMDSFGLNLVFPSKIYTTAVAFDKEGCIVVTDVC 338
Query: 219 NHRVQIFDVNGR--VITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFT 273
+ V + S G L +P G+ + V DSG++ ++I++
Sbjct: 339 SQAVICLGKPEEFPIFNPLVSHG-----LSYPVGLTYTANNSLVVLDSGDHSVKIYS 390
>UNIPROTKB|D4A1N9 [details] [associations]
symbol:Pam "Peptidyl-glycine alpha-amidating monooxygenase"
species:10116 "Rattus norvegicus" [GO:0004504 "peptidylglycine
monooxygenase activity" evidence=IEA] [GO:0005507 "copper ion
binding" evidence=IEA] [GO:0006518 "peptide metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR000323 InterPro:IPR000720 InterPro:IPR001258
InterPro:IPR008977 InterPro:IPR014783 InterPro:IPR014784
InterPro:IPR020611 Pfam:PF01082 Pfam:PF01436 PRINTS:PR00790
PROSITE:PS00084 PROSITE:PS00085 RGD:3252 GO:GO:0016020
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0005507 GO:GO:0006518
GeneTree:ENSGT00530000063085 GO:GO:0004504 Gene3D:2.60.120.230
Gene3D:2.60.120.310 InterPro:IPR013017 SUPFAM:SSF49742
PROSITE:PS51125 IPI:IPI00231906 Ensembl:ENSRNOT00000044154
ArrayExpress:D4A1N9 Uniprot:D4A1N9
Length = 872
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 63/236 (26%), Positives = 98/236 (41%)
Query: 57 WPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWP-RGIAVGPDNSIV 112
WP G+ + P S V DS N+ V F D N F + RG+ +++I+
Sbjct: 402 WP-GVYLLPGQVSGVALDSKNNLV--IFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTIL 458
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 172
V D +N ++ QS G + PH +++ V+D H Q+F
Sbjct: 459 VIDPNN--AEILQSSGKNLFYL------------PHGLSIDTDGNYWVTDVALH--QVFK 502
Query: 173 VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSN-NHRVQIFDVNGR 230
++ + +G+ G+ P +AV +T V VSD N R+ F +G+
Sbjct: 503 LDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK 562
Query: 231 VITSFGSEGS----EEGQLKFPRGVA-VDDQGYISVGDSGNNRIQIFTPDG-QFLR 280
+T +G E S GQ P +A V + V D N RIQ F D +F+R
Sbjct: 563 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVR 618
>UNIPROTKB|F8WE90 [details] [associations]
symbol:PAM "Peptidyl-alpha-hydroxyglycine alpha-amidating
lyase" species:9606 "Homo sapiens" [GO:0004504 "peptidylglycine
monooxygenase activity" evidence=IEA] [GO:0005507 "copper ion
binding" evidence=IEA] [GO:0006518 "peptide metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR000323 InterPro:IPR000720 InterPro:IPR001258
InterPro:IPR008977 InterPro:IPR014783 InterPro:IPR014784
InterPro:IPR020611 Pfam:PF01082 Pfam:PF01436 PRINTS:PR00790
PROSITE:PS00084 PROSITE:PS00085 GO:GO:0016020 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0005507 GO:GO:0006518 GO:GO:0004504
Gene3D:2.60.120.230 Gene3D:2.60.120.310 InterPro:IPR013017
SUPFAM:SSF49742 PROSITE:PS51125 EMBL:AC008779 EMBL:AC010250
EMBL:AC113373 IPI:IPI00940221 HGNC:HGNC:8596 ChiTaRS:PAM
EMBL:AC008501 ProteinModelPortal:F8WE90 SMR:F8WE90
Ensembl:ENST00000274392 UCSC:uc011cuz.2 ArrayExpress:F8WE90
Bgee:F8WE90 Uniprot:F8WE90
Length = 875
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 43/131 (32%), Positives = 62/131 (47%)
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV--ITSFGSE---GSEEGQLKFPRGVAVDD 255
PH +++ V+D H+V D N + + G GS++ P VAVD
Sbjct: 484 PHGLSIDKDGNYWVTDVALHQVFKLDPNNKEGPVLILGRSMQPGSDQNHFCQPTDVAVDP 543
Query: 256 -QGYISVGDSG-NNRIQIFTPDGQFLRAFGCWGSGD----GEFKGLEGVAVMSN-GNILV 308
G I V D N+RI F+P G+F+ +G SG G+F +A++ G + V
Sbjct: 544 GTGAIYVSDGYCNSRIVQFSPSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCV 603
Query: 309 CDRENHRIQVF 319
DREN RIQ F
Sbjct: 604 ADRENGRIQCF 614
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 66/237 (27%), Positives = 98/237 (41%)
Query: 57 WPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWPRGIAVGP--DNSI 111
WP G+ + P S V D N+ V F D N F + + I +GP +++I
Sbjct: 407 WP-GVYLLPGQVSGVALDPKNNLV--IFHRGDHVWDGNSFDSKFVYQQ-IGLGPIEEDTI 462
Query: 112 VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
+V D +N V QS G + PH +++ V+D H+V
Sbjct: 463 LVIDPNN--AAVLQSSGKNLFYL------------PHGLSIDKDGNYWVTDVALHQVFKL 508
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSN-NHRVQIFDVNG 229
D N + + +G+ G+ P +AV T + VSD N R+ F +G
Sbjct: 509 DPNNK--EGPVLILGRSMQPGSDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFSPSG 566
Query: 230 RVITSFGSEGSEE----GQLKFPRGVA-VDDQGYISVGDSGNNRIQIFTPDG-QFLR 280
+ IT +G E S GQ P +A V G + V D N RIQ F D +F+R
Sbjct: 567 KFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVR 623
>UNIPROTKB|Q13049 [details] [associations]
symbol:TRIM32 "E3 ubiquitin-protein ligase TRIM32"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043621 "protein self-association" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005863 "striated muscle
myosin thick filament" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0045862 "positive regulation
of proteolysis" evidence=IDA] [GO:0045787 "positive regulation of
cell cycle" evidence=IDA] [GO:0030307 "positive regulation of cell
growth" evidence=IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0030957 "Tat protein binding"
evidence=TAS] [GO:0045087 "innate immune response" evidence=TAS]
[GO:0009411 "response to UV" evidence=ISS] [GO:0034612 "response to
tumor necrosis factor" evidence=ISS] [GO:0045444 "fat cell
differentiation" evidence=ISS] [GO:0045666 "positive regulation of
neuron differentiation" evidence=ISS] [GO:0050769 "positive
regulation of neurogenesis" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:2000147 "positive regulation of cell motility"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0031369
"translation initiation factor binding" evidence=ISS] [GO:0048147
"negative regulation of fibroblast proliferation" evidence=ISS]
[GO:0017022 "myosin binding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 Reactome:REACT_6900
GO:GO:0009411 GO:GO:0043066 GO:GO:0030307 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0045087
GO:GO:0003723 GO:GO:0043621 GO:GO:0003713 GO:GO:0050769
GO:GO:0017022 GO:GO:0034612 GO:GO:0030335 GO:GO:0045666
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0048147
GO:GO:0004842 GO:GO:0045862 GO:GO:0045444 GO:GO:0045732
InterPro:IPR013017 PROSITE:PS51125 GO:GO:0000209 InterPro:IPR017907
GO:GO:0042787 MIM:209900 Orphanet:110 GO:GO:0043130 GO:GO:0045787
EMBL:AL133284 GO:GO:0031369 GO:GO:0005863 GO:GO:0030957 EMBL:U18543
EMBL:BC003154 IPI:IPI00297113 RefSeq:NP_001093149.1
RefSeq:NP_036342.2 UniGene:Hs.591910 PDB:2CT2 PDBsum:2CT2
ProteinModelPortal:Q13049 SMR:Q13049 IntAct:Q13049
MINT:MINT-2854880 STRING:Q13049 PhosphoSite:Q13049 DMDM:20178303
PaxDb:Q13049 PRIDE:Q13049 DNASU:22954 Ensembl:ENST00000373983
Ensembl:ENST00000450136 GeneID:22954 KEGG:hsa:22954 UCSC:uc004bjw.2
CTD:22954 GeneCards:GC09P119449 HGNC:HGNC:16380 HPA:HPA050060
MIM:254110 MIM:602290 neXtProt:NX_Q13049 Orphanet:1878
PharmGKB:PA38130 eggNOG:NOG269289 HOGENOM:HOG000120114
HOVERGEN:HBG060344 InParanoid:Q13049 KO:K10607 OMA:RLPRQFC
OrthoDB:EOG4QZ7KF PhylomeDB:Q13049 EvolutionaryTrace:Q13049
GenomeRNAi:22954 NextBio:43741 ArrayExpress:Q13049 Bgee:Q13049
CleanEx:HS_TRIM32 Genevestigator:Q13049 GermOnline:ENSG00000119401
Uniprot:Q13049
Length = 653
Score = 121 (47.7 bits), Expect = 0.00025, P = 0.00025
Identities = 40/146 (27%), Positives = 68/146 (46%)
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS-EGSEE 242
F+ K G+ G+ G P + V++ V+V+D N+R+Q+F G + S G +
Sbjct: 357 FLKKMGAKGSTPGMFNLPVSLYVTSQGEVLVADRGNYRIQVFTRKGFLKEIRRSPSGIDS 416
Query: 243 GQLKF---------PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
L F P VA++ QG I V DS +N ++++T DG + C S +
Sbjct: 417 FVLSFLGADLPNLTPLSVAMNCQGLIGVTDSYDNSLKVYTLDGHCV---ACHRS---QLS 470
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + +G +V D E ++ F
Sbjct: 471 KPWGITALPSGQFVVTDVEGGKLWCF 496
>UNIPROTKB|P19021 [details] [associations]
symbol:PAM "Peptidyl-glycine alpha-amidating monooxygenase"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0031418 "L-ascorbic acid binding" evidence=IEA]
[GO:0004598 "peptidylamidoglycolate lyase activity" evidence=IEA]
[GO:0001519 "peptide amidation" evidence=IEA] [GO:0001666 "response
to hypoxia" evidence=IEA] [GO:0001676 "long-chain fatty acid
metabolic process" evidence=IEA] [GO:0005507 "copper ion binding"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009268 "response to pH" evidence=IEA]
[GO:0009404 "toxin metabolic process" evidence=IEA] [GO:0009986
"cell surface" evidence=IEA] [GO:0018032 "protein amidation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0022602 "ovulation cycle process" evidence=IEA] [GO:0030667
"secretory granule membrane" evidence=IEA] [GO:0032355 "response to
estradiol stimulus" evidence=IEA] [GO:0032956 "regulation of actin
cytoskeleton organization" evidence=IEA] [GO:0042476
"odontogenesis" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0043005 "neuron projection" evidence=IEA]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0046688 "response to
copper ion" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050708 "regulation of protein
secretion" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0051384 "response to glucocorticoid stimulus"
evidence=IEA] [GO:0060135 "maternal process involved in female
pregnancy" evidence=IEA] [GO:0060173 "limb development"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0030141 "secretory granule" evidence=NAS] [GO:0004504
"peptidylglycine monooxygenase activity" evidence=NAS] [GO:0006518
"peptide metabolic process" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006464 "cellular protein modification
process" evidence=TAS] InterPro:IPR000323 InterPro:IPR000720
InterPro:IPR001258 InterPro:IPR008977 InterPro:IPR014783
InterPro:IPR014784 InterPro:IPR020611 Pfam:PF01082 Pfam:PF01436
PRINTS:PR00790 PROSITE:PS00084 PROSITE:PS00085 GO:GO:0016021
GO:GO:0005576 GO:GO:0007507 GO:GO:0042493 GO:GO:0032355
GO:GO:0043204 GO:GO:0030141 Gene3D:2.120.10.30 InterPro:IPR011042
GO:GO:0001666 GO:GO:0051384 GO:GO:0007417 GO:GO:0005507
GO:GO:0009268 GO:GO:0046688 GO:GO:0031418 GO:GO:0006518
GO:GO:0006464 DrugBank:DB00126 eggNOG:COG3391 KO:K00504
GO:GO:0004598 GO:GO:0004504 Gene3D:2.60.120.230 Gene3D:2.60.120.310
InterPro:IPR013017 SUPFAM:SSF49742 PROSITE:PS51125 CTD:5066
HOVERGEN:HBG004218 OrthoDB:EOG46MBHT EMBL:M37721 EMBL:S75037
EMBL:S75038 EMBL:AB095007 EMBL:AK290158 EMBL:BT007419 EMBL:AC008779
EMBL:AC010250 EMBL:AC113373 EMBL:CH471086 EMBL:BC018127
EMBL:AF010472 EMBL:AF035320 IPI:IPI00177543 IPI:IPI00219042
IPI:IPI00219043 IPI:IPI00749176 IPI:IPI00878690 IPI:IPI00940221
PIR:A35477 RefSeq:NP_000910.2 RefSeq:NP_001170777.1
RefSeq:NP_620121.1 RefSeq:NP_620176.1 RefSeq:NP_620177.1
UniGene:Hs.369430 ProteinModelPortal:P19021 SMR:P19021
IntAct:P19021 STRING:P19021 PhosphoSite:P19021 DMDM:23503036
PaxDb:P19021 PRIDE:P19021 DNASU:5066 Ensembl:ENST00000304400
Ensembl:ENST00000346918 Ensembl:ENST00000348126
Ensembl:ENST00000438793 Ensembl:ENST00000455264 GeneID:5066
KEGG:hsa:5066 UCSC:uc003kns.3 UCSC:uc003knt.3 UCSC:uc003knu.3
UCSC:uc003knv.3 UCSC:uc003knw.3 GeneCards:GC05P102089
HGNC:HGNC:8596 HPA:CAB026119 MIM:170270 neXtProt:NX_P19021
PharmGKB:PA32926 OMA:DTVHHML BindingDB:P19021 ChEMBL:CHEMBL2544
ChiTaRS:PAM GenomeRNAi:5066 NextBio:19512 ArrayExpress:P19021
Bgee:P19021 CleanEx:HS_PAM Genevestigator:P19021
GermOnline:ENSG00000145730 GO:GO:0060173 Uniprot:P19021
Length = 973
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 43/131 (32%), Positives = 62/131 (47%)
Query: 201 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV--ITSFGSE---GSEEGQLKFPRGVAVDD 255
PH +++ V+D H+V D N + + G GS++ P VAVD
Sbjct: 581 PHGLSIDKDGNYWVTDVALHQVFKLDPNNKEGPVLILGRSMQPGSDQNHFCQPTDVAVDP 640
Query: 256 -QGYISVGDSG-NNRIQIFTPDGQFLRAFGCWGSGD----GEFKGLEGVAVMSN-GNILV 308
G I V D N+RI F+P G+F+ +G SG G+F +A++ G + V
Sbjct: 641 GTGAIYVSDGYCNSRIVQFSPSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCV 700
Query: 309 CDRENHRIQVF 319
DREN RIQ F
Sbjct: 701 ADRENGRIQCF 711
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 66/237 (27%), Positives = 98/237 (41%)
Query: 57 WPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWPRGIAVGP--DNSI 111
WP G+ + P S V D N+ V F D N F + + I +GP +++I
Sbjct: 504 WP-GVYLLPGQVSGVALDPKNNLV--IFHRGDHVWDGNSFDSKFVYQQ-IGLGPIEEDTI 559
Query: 112 VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
+V D +N V QS G + PH +++ V+D H+V
Sbjct: 560 LVIDPNN--AAVLQSSGKNLFYL------------PHGLSIDKDGNYWVTDVALHQVFKL 605
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSN-NHRVQIFDVNG 229
D N + + +G+ G+ P +AV T + VSD N R+ F +G
Sbjct: 606 DPNNK--EGPVLILGRSMQPGSDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFSPSG 663
Query: 230 RVITSFGSEGSEE----GQLKFPRGVA-VDDQGYISVGDSGNNRIQIFTPDG-QFLR 280
+ IT +G E S GQ P +A V G + V D N RIQ F D +F+R
Sbjct: 664 KFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVR 720
>RGD|3252 [details] [associations]
symbol:Pam "peptidylglycine alpha-amidating monooxygenase"
species:10116 "Rattus norvegicus" [GO:0001519 "peptide amidation"
evidence=IDA] [GO:0001666 "response to hypoxia" evidence=IEP]
[GO:0001676 "long-chain fatty acid metabolic process" evidence=IDA]
[GO:0004504 "peptidylglycine monooxygenase activity"
evidence=IEA;IGI;IDA] [GO:0004598 "peptidylamidoglycolate lyase
activity" evidence=IDA] [GO:0005507 "copper ion binding"
evidence=IEA;IDA] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=IDA] [GO:0005802 "trans-Golgi network"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0006518 "peptide metabolic process"
evidence=IEA;IDA] [GO:0007417 "central nervous system development"
evidence=IEP] [GO:0007507 "heart development" evidence=IEP]
[GO:0007595 "lactation" evidence=IEP] [GO:0008270 "zinc ion binding"
evidence=IDA] [GO:0009268 "response to pH" evidence=IDA] [GO:0009404
"toxin metabolic process" evidence=IDA] [GO:0009986 "cell surface"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0018032 "protein amidation"
evidence=IDA] [GO:0019538 "protein metabolic process" evidence=IDA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0022602
"ovulation cycle process" evidence=IEP] [GO:0030141 "secretory
granule" evidence=IDA] [GO:0030658 "transport vesicle membrane"
evidence=IEA] [GO:0030667 "secretory granule membrane" evidence=IDA]
[GO:0031418 "L-ascorbic acid binding" evidence=IEA] [GO:0032355
"response to estradiol stimulus" evidence=IEP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IMP]
[GO:0042476 "odontogenesis" evidence=IEP] [GO:0042493 "response to
drug" evidence=IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043204
"perikaryon" evidence=IDA] [GO:0046688 "response to copper ion"
evidence=IEP] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050708 "regulation of protein secretion"
evidence=IMP] [GO:0051260 "protein homooligomerization" evidence=IDA]
[GO:0051384 "response to glucocorticoid stimulus" evidence=IEP]
[GO:0060135 "maternal process involved in female pregnancy"
evidence=IEP] [GO:0060173 "limb development" evidence=IEP]
InterPro:IPR000323 InterPro:IPR000720 InterPro:IPR001258
InterPro:IPR008977 InterPro:IPR014783 InterPro:IPR014784
InterPro:IPR020611 Pfam:PF01082 Pfam:PF01436 PRINTS:PR00790
PROSITE:PS00084 PROSITE:PS00085 RGD:3252 GO:GO:0016021 GO:GO:0005886
GO:GO:0048471 GO:GO:0009986 GO:GO:0007507 GO:GO:0060135 GO:GO:0042493
GO:GO:0032355 GO:GO:0043204 Gene3D:2.120.10.30 InterPro:IPR011042
GO:GO:0008270 GO:GO:0051260 GO:GO:0001666 GO:GO:0051384 GO:GO:0043005
GO:GO:0005509 GO:GO:0007417 GO:GO:0006357 GO:GO:0005507 GO:GO:0009268
GO:GO:0046688 GO:GO:0001676 GO:GO:0031418 GO:GO:0005802 GO:GO:0032956
eggNOG:COG3391 GeneTree:ENSGT00530000063085 KO:K00504 GO:GO:0004598
GO:GO:0004504 Gene3D:2.60.120.230 Gene3D:2.60.120.310
InterPro:IPR013017 SUPFAM:SSF49742 PROSITE:PS51125 CTD:5066
HOGENOM:HOG000293368 HOVERGEN:HBG004218 OrthoDB:EOG46MBHT
GO:GO:0030658 GO:GO:0060173 EMBL:U52650 EMBL:U52639 EMBL:U52640
EMBL:U52641 EMBL:U52642 EMBL:U52643 EMBL:U52644 EMBL:U52645
EMBL:U52646 EMBL:U52647 EMBL:U52648 EMBL:U52649 EMBL:U52653
EMBL:U52651 EMBL:U52652 EMBL:U52664 EMBL:U52654 EMBL:U52655
EMBL:U52656 EMBL:U52657 EMBL:U52658 EMBL:U52659 EMBL:U52660
EMBL:U52661 EMBL:U52662 EMBL:U52663 EMBL:M25732 EMBL:M25719
EMBL:M63662 EMBL:X59685 EMBL:X59686 EMBL:X59687 EMBL:X59688
EMBL:X59689 EMBL:M82845 IPI:IPI00231904 IPI:IPI00231905
IPI:IPI00231906 IPI:IPI00231907 IPI:IPI00231908 IPI:IPI00560255
IPI:IPI00780724 PIR:A32193 RefSeq:NP_037132.2 UniGene:Rn.1121
PDB:1OPM PDB:1PHM PDB:1SDW PDB:1YI9 PDB:1YIP PDB:1YJK PDB:1YJL
PDB:3FVZ PDB:3FW0 PDB:3MIB PDB:3MIC PDB:3MID PDB:3MIE PDB:3MIF
PDB:3MIG PDB:3MIH PDB:3MLJ PDB:3MLK PDB:3MLL PDB:3PHM PDBsum:1OPM
PDBsum:1PHM PDBsum:1SDW PDBsum:1YI9 PDBsum:1YIP PDBsum:1YJK
PDBsum:1YJL PDBsum:3FVZ PDBsum:3FW0 PDBsum:3MIB PDBsum:3MIC
PDBsum:3MID PDBsum:3MIE PDBsum:3MIF PDBsum:3MIG PDBsum:3MIH
PDBsum:3MLJ PDBsum:3MLK PDBsum:3MLL PDBsum:3PHM
ProteinModelPortal:P14925 SMR:P14925 IntAct:P14925 STRING:P14925
PhosphoSite:P14925 PRIDE:P14925 Ensembl:ENSRNOT00000041418
Ensembl:ENSRNOT00000049205 Ensembl:ENSRNOT00000056457 GeneID:25508
KEGG:rno:25508 BRENDA:4.3.2.5 BindingDB:P14925 ChEMBL:CHEMBL4963
EvolutionaryTrace:P14925 NextBio:606933 ArrayExpress:P14925
Genevestigator:P14925 GermOnline:ENSRNOG00000033280 GO:GO:0030667
GO:GO:0042476 GO:GO:0022602 GO:GO:0001519 GO:GO:0018032 GO:GO:0050708
GO:GO:0009404 Uniprot:P14925
Length = 976
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 63/236 (26%), Positives = 98/236 (41%)
Query: 57 WPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWP-RGIAVGPDNSIV 112
WP G+ + P S V DS N+ V F D N F + RG+ +++I+
Sbjct: 507 WP-GVYLLPGQVSGVALDSKNNLV--IFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTIL 563
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 172
V D +N ++ QS G + PH +++ V+D H Q+F
Sbjct: 564 VIDPNN--AEILQSSGKNLFYL------------PHGLSIDTDGNYWVTDVALH--QVFK 607
Query: 173 VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSN-NHRVQIFDVNGR 230
++ + +G+ G+ P +AV +T V VSD N R+ F +G+
Sbjct: 608 LDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK 667
Query: 231 VITSFGSEGS----EEGQLKFPRGVA-VDDQGYISVGDSGNNRIQIFTPDG-QFLR 280
+T +G E S GQ P +A V + V D N RIQ F D +F+R
Sbjct: 668 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVR 723
>UNIPROTKB|P14925 [details] [associations]
symbol:Pam "Peptidyl-glycine alpha-amidating monooxygenase"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000323 InterPro:IPR000720
InterPro:IPR001258 InterPro:IPR008977 InterPro:IPR014783
InterPro:IPR014784 InterPro:IPR020611 Pfam:PF01082 Pfam:PF01436
PRINTS:PR00790 PROSITE:PS00084 PROSITE:PS00085 RGD:3252
GO:GO:0016021 GO:GO:0005886 GO:GO:0048471 GO:GO:0009986
GO:GO:0007507 GO:GO:0060135 GO:GO:0042493 GO:GO:0032355
GO:GO:0043204 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
GO:GO:0051260 GO:GO:0001666 GO:GO:0051384 GO:GO:0043005
GO:GO:0005509 GO:GO:0007417 GO:GO:0006357 GO:GO:0005507
GO:GO:0009268 GO:GO:0046688 GO:GO:0001676 GO:GO:0031418
GO:GO:0005802 GO:GO:0032956 eggNOG:COG3391
GeneTree:ENSGT00530000063085 KO:K00504 GO:GO:0004598 GO:GO:0004504
Gene3D:2.60.120.230 Gene3D:2.60.120.310 InterPro:IPR013017
SUPFAM:SSF49742 PROSITE:PS51125 CTD:5066 HOGENOM:HOG000293368
HOVERGEN:HBG004218 OrthoDB:EOG46MBHT GO:GO:0030658 GO:GO:0060173
EMBL:U52650 EMBL:U52639 EMBL:U52640 EMBL:U52641 EMBL:U52642
EMBL:U52643 EMBL:U52644 EMBL:U52645 EMBL:U52646 EMBL:U52647
EMBL:U52648 EMBL:U52649 EMBL:U52653 EMBL:U52651 EMBL:U52652
EMBL:U52664 EMBL:U52654 EMBL:U52655 EMBL:U52656 EMBL:U52657
EMBL:U52658 EMBL:U52659 EMBL:U52660 EMBL:U52661 EMBL:U52662
EMBL:U52663 EMBL:M25732 EMBL:M25719 EMBL:M63662 EMBL:X59685
EMBL:X59686 EMBL:X59687 EMBL:X59688 EMBL:X59689 EMBL:M82845
IPI:IPI00231904 IPI:IPI00231905 IPI:IPI00231906 IPI:IPI00231907
IPI:IPI00231908 IPI:IPI00560255 IPI:IPI00780724 PIR:A32193
RefSeq:NP_037132.2 UniGene:Rn.1121 PDB:1OPM PDB:1PHM PDB:1SDW
PDB:1YI9 PDB:1YIP PDB:1YJK PDB:1YJL PDB:3FVZ PDB:3FW0 PDB:3MIB
PDB:3MIC PDB:3MID PDB:3MIE PDB:3MIF PDB:3MIG PDB:3MIH PDB:3MLJ
PDB:3MLK PDB:3MLL PDB:3PHM PDBsum:1OPM PDBsum:1PHM PDBsum:1SDW
PDBsum:1YI9 PDBsum:1YIP PDBsum:1YJK PDBsum:1YJL PDBsum:3FVZ
PDBsum:3FW0 PDBsum:3MIB PDBsum:3MIC PDBsum:3MID PDBsum:3MIE
PDBsum:3MIF PDBsum:3MIG PDBsum:3MIH PDBsum:3MLJ PDBsum:3MLK
PDBsum:3MLL PDBsum:3PHM ProteinModelPortal:P14925 SMR:P14925
IntAct:P14925 STRING:P14925 PhosphoSite:P14925 PRIDE:P14925
Ensembl:ENSRNOT00000041418 Ensembl:ENSRNOT00000049205
Ensembl:ENSRNOT00000056457 GeneID:25508 KEGG:rno:25508
BRENDA:4.3.2.5 BindingDB:P14925 ChEMBL:CHEMBL4963
EvolutionaryTrace:P14925 NextBio:606933 ArrayExpress:P14925
Genevestigator:P14925 GermOnline:ENSRNOG00000033280 GO:GO:0030667
GO:GO:0042476 GO:GO:0022602 GO:GO:0001519 GO:GO:0018032
GO:GO:0050708 GO:GO:0009404 Uniprot:P14925
Length = 976
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 63/236 (26%), Positives = 98/236 (41%)
Query: 57 WPRGIAVGPDN-SIVVADSSNHRVQVCFPHFD--LKTNCVFLAFTWP-RGIAVGPDNSIV 112
WP G+ + P S V DS N+ V F D N F + RG+ +++I+
Sbjct: 507 WP-GVYLLPGQVSGVALDSKNNLV--IFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTIL 563
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 172
V D +N ++ QS G + PH +++ V+D H Q+F
Sbjct: 564 VIDPNN--AEILQSSGKNLFYL------------PHGLSIDTDGNYWVTDVALH--QVFK 607
Query: 173 VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSN-NHRVQIFDVNGR 230
++ + +G+ G+ P +AV +T V VSD N R+ F +G+
Sbjct: 608 LDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK 667
Query: 231 VITSFGSEGS----EEGQLKFPRGVA-VDDQGYISVGDSGNNRIQIFTPDG-QFLR 280
+T +G E S GQ P +A V + V D N RIQ F D +F+R
Sbjct: 668 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVR 723
>MGI|MGI:1917057 [details] [associations]
symbol:Trim32 "tripartite motif-containing 32" species:10090
"Mus musculus" [GO:0000209 "protein polyubiquitination"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005863 "striated muscle myosin thick
filament" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009411 "response to UV" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0017022 "myosin binding"
evidence=IPI] [GO:0030307 "positive regulation of cell growth"
evidence=ISO] [GO:0030335 "positive regulation of cell migration"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=IPI] [GO:0034612 "response to tumor necrosis factor"
evidence=IDA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO;NAS] [GO:0043130 "ubiquitin binding" evidence=ISO]
[GO:0043621 "protein self-association" evidence=ISO] [GO:0045666
"positive regulation of neuron differentiation" evidence=IDA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IDA] [GO:0045787 "positive regulation of cell cycle"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050769 "positive regulation of neurogenesis" evidence=IDA]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IDA] [GO:2000147 "positive regulation of cell
motility" evidence=IDA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 MGI:MGI:1917057
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0009411
GO:GO:0043066 GO:GO:0030307 GO:GO:0046872 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 GO:GO:0003723 GO:GO:0043621
GO:GO:0050769 GO:GO:0034612 GO:GO:0030335 GO:GO:0045666
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0048147
GO:GO:0004842 GO:GO:0045862 GO:GO:0045444 GO:GO:0045732
InterPro:IPR013017 PROSITE:PS51125 GO:GO:0000209 InterPro:IPR017907
GO:GO:0042787 GO:GO:0043130 GO:GO:0045787 EMBL:AL691456
GeneTree:ENSGT00550000074377 CTD:22954 eggNOG:NOG269289
HOGENOM:HOG000120114 HOVERGEN:HBG060344 KO:K10607 OMA:RLPRQFC
OrthoDB:EOG4QZ7KF EMBL:AF347694 EMBL:BC034104 IPI:IPI00321005
RefSeq:NP_001155254.1 RefSeq:NP_444314.2 UniGene:Mm.22786
ProteinModelPortal:Q8CH72 SMR:Q8CH72 IntAct:Q8CH72 STRING:Q8CH72
PhosphoSite:Q8CH72 PaxDb:Q8CH72 PRIDE:Q8CH72
Ensembl:ENSMUST00000050850 Ensembl:ENSMUST00000107366 GeneID:69807
KEGG:mmu:69807 InParanoid:Q8CH72 NextBio:330382 Bgee:Q8CH72
Genevestigator:Q8CH72 GermOnline:ENSMUSG00000051675 Uniprot:Q8CH72
Length = 655
Score = 120 (47.3 bits), Expect = 0.00033, P = 0.00033
Identities = 39/146 (26%), Positives = 69/146 (47%)
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS-EGSEE 242
F+ K G+ G+ G P + V++ + V+V+D N+R+Q+F+ G + S G +
Sbjct: 359 FLKKMGAKGSTPGMFNLPVSLYVTSQSEVLVADRGNYRIQVFNRKGFLKEIRRSPSGIDS 418
Query: 243 GQLKF---------PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
L F P VA++ G I V DS +N ++++T DG + C S +
Sbjct: 419 FVLSFLGADLPNLTPLSVAMNCHGLIGVTDSYDNSLKVYTMDGHCV---ACHRS---QLS 472
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + +G +V D E ++ F
Sbjct: 473 KPWGITALPSGQFVVTDVEGGKLWCF 498
Score = 116 (45.9 bits), Expect = 0.00090, P = 0.00090
Identities = 53/228 (23%), Positives = 99/228 (43%)
Query: 100 PRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
P +A P S SS + Q F+ K G+ G+ G P + V++ + V+
Sbjct: 331 PEEVAPSPRASPAKQRSSEAASGIQQC--LFLKKMGAKGSTPGMFNLPVSLYVTSQSEVL 388
Query: 160 VSDSNNHRVQIFDVNG--RVFQSDGTFVGKF--GSMGNKAGQLEHPHYIAVSNTNRVIVS 215
V+D N+R+Q+F+ G + + + + F +G L P +A++ + V+
Sbjct: 389 VADRGNYRIQVFNRKGFLKEIRRSPSGIDSFVLSFLGADLPNLT-PLSVAMNCHGLIGVT 447
Query: 216 DSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
DS ++ ++++ ++G + S QL P G+ G V D ++ FT D
Sbjct: 448 DSYDNSLKVYTMDGHCVACHRS------QLSKPWGITALPSGQFVVTDVEGGKLWCFTVD 501
Query: 276 -GQFLRAFGCWGSG-DGEFK--GLEGVAVMSNG-NILVCDREN-HRIQ 317
G + + C S +F EG + G + V +R+N H ++
Sbjct: 502 RGAGVVKYSCLCSAVRPKFVTCDAEGTVYFTQGLGLNVENRQNEHHLE 549
>RGD|1305238 [details] [associations]
symbol:Trim32 "tripartite motif-containing 32" species:10116
"Rattus norvegicus" [GO:0000209 "protein polyubiquitination"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003723 "RNA binding" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005863
"striated muscle myosin thick filament" evidence=ISO;ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA;ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017022 "myosin binding" evidence=IEA;ISO]
[GO:0030307 "positive regulation of cell growth" evidence=IEA;ISO]
[GO:0030335 "positive regulation of cell migration"
evidence=IEA;ISO] [GO:0031369 "translation initiation factor
binding" evidence=ISO;ISS] [GO:0034612 "response to tumor necrosis
factor" evidence=IEA;ISO] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043130 "ubiquitin binding"
evidence=IEA;ISO] [GO:0043621 "protein self-association"
evidence=IEA;ISO] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0045732 "positive regulation
of protein catabolic process" evidence=ISO;ISS] [GO:0045787
"positive regulation of cell cycle" evidence=IEA;ISO] [GO:0045862
"positive regulation of proteolysis" evidence=IEA;ISO] [GO:0048147
"negative regulation of fibroblast proliferation" evidence=IEA]
[GO:0050769 "positive regulation of neurogenesis" evidence=IEA;ISO]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IEA;ISO] [GO:2000147 "positive regulation of
cell motility" evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 RGD:1305238 Prosite:PS00518
GO:GO:0005634 GO:GO:0009411 GO:GO:0043066 GO:GO:0030307
GO:GO:0046872 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
GO:GO:0003723 GO:GO:0050769 GO:GO:0034612 GO:GO:0030335
GO:GO:0045666 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0048147 GO:GO:0004842 GO:GO:0045862 GO:GO:0045444
GO:GO:0045732 InterPro:IPR013017 PROSITE:PS51125 GO:GO:0000209
InterPro:IPR017907 GO:GO:0042787 GO:GO:0045787
GeneTree:ENSGT00550000074377 GO:GO:0031369 GO:GO:0005863 CTD:22954
eggNOG:NOG269289 HOGENOM:HOG000120114 HOVERGEN:HBG060344 KO:K10607
OMA:RLPRQFC OrthoDB:EOG4QZ7KF EMBL:CH473978 EMBL:BC081980
EMBL:BC091385 IPI:IPI00208878 RefSeq:NP_001012103.1 UniGene:Rn.4118
SMR:Q66H79 STRING:Q66H79 Ensembl:ENSRNOT00000013675 GeneID:313264
KEGG:rno:313264 UCSC:RGD:1305238 InParanoid:Q66H79 NextBio:665930
Genevestigator:Q66H79 Uniprot:Q66H79
Length = 655
Score = 119 (46.9 bits), Expect = 0.00042, P = 0.00042
Identities = 39/146 (26%), Positives = 69/146 (47%)
Query: 184 FVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSFGS-EGSEE 242
F+ K G+ G+ G P + V++ + V+V+D N+R+Q+F+ G + S G +
Sbjct: 359 FLKKMGAKGSTPGMFNLPVSLYVTSQSEVLVADRGNYRIQVFNRKGFLKEIRRSPSGIDS 418
Query: 243 GQLKF---------PRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFK 293
L F P VA++ G I V DS +N ++++T DG + C S +
Sbjct: 419 FVLSFLGADLPNLTPLSVAMNCHGLIGVTDSYDNSLKVYTLDGHCV---ACHRS---QLS 472
Query: 294 GLEGVAVMSNGNILVCDRENHRIQVF 319
G+ + +G +V D E ++ F
Sbjct: 473 KPWGITALPSGQFVVTDVEGGKLWCF 498
>TAIR|locus:2147780 [details] [associations]
symbol:AT5G14890 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0006944
"cellular membrane fusion" evidence=RCA] [GO:0009827 "plant-type
cell wall modification" evidence=RCA] [GO:0009860 "pollen tube
growth" evidence=RCA] InterPro:IPR001258 Pfam:PF01436 EMBL:CP002688
Gene3D:2.120.10.30 InterPro:IPR011042 IPI:IPI00528032
RefSeq:NP_196993.2 UniGene:At.31869 ProteinModelPortal:F4K891
SMR:F4K891 EnsemblPlants:AT5G14890.1 GeneID:831341
KEGG:ath:AT5G14890 OMA:PISEMDA Uniprot:F4K891
Length = 754
Score = 119 (46.9 bits), Expect = 0.00050, P = 0.00050
Identities = 50/146 (34%), Positives = 74/146 (50%)
Query: 192 GNKAGQLEHPHYIAVS-NTNRVIVSDSNN---HRVQI-FDVNGRVITSFGSE----GSEE 242
G+K G +E P+ I VS N +IV DS N H++ + G+ GS+ G +
Sbjct: 86 GSKLG-IE-PYAIEVSPNGGELIVLDSENSNIHKISMPLSRYGKPKLLSGSQEGYTGHVD 143
Query: 243 GQLKF-----PRGVAVDDQGYISVGDSGNNRIQIFTPDG-QFLRAFGCWGSGDGE----F 292
G+LK PRG+A+DD+G I V D+ N I+ + DG + A G W G E F
Sbjct: 144 GKLKEARMNRPRGLAMDDRGNIYVADTINMAIRKISDDGVSTIAAGGRWSGGSKEESMRF 203
Query: 293 KG-LEGVAVMSNGNILVCDRENHRIQ 317
+ + V S+ ++LV DR N I+
Sbjct: 204 SDDFDLIYVSSSCSLLVIDRGNQLIK 229
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.138 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 319 319 0.00084 116 3 11 22 0.38 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 99
No. of states in DFA: 601 (64 KB)
Total size of DFA: 202 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.30u 0.11s 24.41t Elapsed: 00:00:16
Total cpu time: 24.35u 0.11s 24.46t Elapsed: 00:00:16
Start: Thu Aug 15 12:48:38 2013 End: Thu Aug 15 12:48:54 2013