RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13998
(319 letters)
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 117 bits (293), Expect = 1e-31
Identities = 75/293 (25%), Positives = 133/293 (45%), Gaps = 33/293 (11%)
Query: 36 LQKRRLQF--KIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCV 93
++++R+ + K G G G FT P G+AV N I+VAD++NHR+Q+ FD +
Sbjct: 1 IKRQRMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQI----FDKEGRFK 56
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGK------FGSMGNKAGQLEHP 147
F + + + V ++ + V + T + A L+HP
Sbjct: 57 FQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHP 116
Query: 148 HYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 207
+ V N R+IV + RV IFD NG V + LE P+ + V+
Sbjct: 117 RGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-----------KFGCSKHLEFPNGVVVN 165
Query: 208 NTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNN 267
+ + +SD+ H V++F+ G+ + EG +P GV ++ G I + D+ NN
Sbjct: 166 DKQEIFISDNRAHCVKVFNYEGQYLRQI----GGEGITNYPIGVGINSNGEILIADNHNN 221
Query: 268 -RIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ IFT DGQ + A + VA+M +G++++ + ++R+ ++
Sbjct: 222 FNLTIFTQDGQLISALE----SKVKHAQCFDVALMDDGSVVLASK-DYRLYIY 269
Score = 48.1 bits (113), Expect = 4e-07
Identities = 12/74 (16%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSN-HRVQVCFPHFD-LKTNCVFLAFTWPRGIAVGPDNSI 111
+P G+ + + I++AD+ N + + + + +A+ D S+
Sbjct: 198 ITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSV 257
Query: 112 VVADSSNHRVQVFQ 125
V+A ++R+ +++
Sbjct: 258 VLASK-DYRLYIYR 270
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 260
Score = 74.1 bits (180), Expect = 7e-16
Identities = 45/248 (18%), Positives = 71/248 (28%), Gaps = 30/248 (12%)
Query: 58 PRGIAVGPDNSIVVADSSNH-RVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADS 116
P G+AV ++ V + RV T F P+G+AV ++ V D
Sbjct: 16 PSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF 75
Query: 117 SNHRVQVFQSDGTFVGKFGSM-----------------GNKAGQLEHPHYIAVSNTNRVI 159
+N V + ++ +
Sbjct: 76 NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP 135
Query: 160 VSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE-------HPHYIAVSNTNRV 212
+ N+ D +G V+ +D Q+ P IAV V
Sbjct: 136 FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTV 195
Query: 213 IVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
V++ N ++V T G L P VAVD + V D GN+R+
Sbjct: 196 YVTEHNTNQVVKLLAGSTTSTVLPFTG-----LNTPLAVAVDSDRTVYVADRGNDRVVKL 250
Query: 273 TPDGQFLR 280
T
Sbjct: 251 TSLEHHHH 258
Score = 68.0 bits (164), Expect = 8e-14
Identities = 39/245 (15%), Positives = 70/245 (28%), Gaps = 35/245 (14%)
Query: 100 PRGIAVGPDNSIVVADSSNH-RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
P G+AV ++ V + RV + T G+ L P +AV V
Sbjct: 16 PSGVAVDSAGNVYVTSEGMYGRVVKLATGST-----GTTVLPFNGLYQPQGLAVDGAGTV 70
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
V+D NN V + + + + + + ++
Sbjct: 71 YVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKT 130
Query: 219 NHRVQIFDVNGRVITSFGSEGS------------------------EEGQLKFPRGVAVD 254
+ +N + + G+ + P G+AVD
Sbjct: 131 QTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVD 190
Query: 255 DQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENH 314
+ G + V + N++ G VAV S+ + V DR N
Sbjct: 191 EAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTG-----LNTPLAVAVDSDRTVYVADRGND 245
Query: 315 RIQVF 319
R+
Sbjct: 246 RVVKL 250
Score = 53.3 bits (126), Expect = 7e-09
Identities = 21/78 (26%), Positives = 30/78 (38%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVV 113
T P GIAV ++ V + + ++V T F P +AV D ++ V
Sbjct: 180 DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYV 239
Query: 114 ADSSNHRVQVFQSDGTFV 131
AD N RV S
Sbjct: 240 ADRGNDRVVKLTSLEHHH 257
Score = 37.9 bits (86), Expect = 9e-04
Identities = 19/101 (18%), Positives = 30/101 (29%), Gaps = 6/101 (5%)
Query: 186 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH-RVQIFDVNGRVITSFGSEGSEEGQ 244
G+ P +AV + V V+ + RV G+
Sbjct: 1 GQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGS-----TGTTVLPFNG 55
Query: 245 LKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCW 285
L P+G+AVD G + V D N + +
Sbjct: 56 LYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDG 96
Score = 32.1 bits (71), Expect = 0.060
Identities = 22/95 (23%), Positives = 30/95 (31%), Gaps = 13/95 (13%)
Query: 132 GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH-RVQIFDVNGRVFQSDGTFVGKFGS 190
G+ P +AV + V V+ + RV GT V F
Sbjct: 1 GQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGS-----TGTTVLPF-- 53
Query: 191 MGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 225
L P +AV V V+D NN V +
Sbjct: 54 -----NGLYQPQGLAVDGAGTVYVTDFNNRVVTLA 83
Score = 29.4 bits (64), Expect = 0.51
Identities = 10/34 (29%), Positives = 13/34 (38%)
Query: 286 GSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G GVAV S GN+ V + V
Sbjct: 7 FTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVK 40
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue
{Nostoc punctiforme [TaxId: 272131]}
Length = 302
Score = 72.4 bits (176), Expect = 4e-15
Identities = 28/228 (12%), Positives = 62/228 (27%), Gaps = 10/228 (4%)
Query: 56 TWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVAD 115
T+ +A PD +I V + + P + + + G+A + +V
Sbjct: 28 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGK--VSGLAFTSNGDLVATG 85
Query: 116 SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG 175
+ + V + + + I + + + +DS + + DV
Sbjct: 86 WNADSIPVVSLVKSDGTVETLLTLPDA--IFLNGITPLSDTQYLTADSYRGAIWLIDVVQ 143
Query: 176 RVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITSF 235
+ N + + N + VS++ + V+
Sbjct: 144 PS--GSIWLEHPMLARSNSESVFPAANGLKRFG-NFLYVSNTEKMLLLRIPVDSTDKPGE 200
Query: 236 GSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFG 283
E+ A D +G + N + PD
Sbjct: 201 PEIFVEQT---NIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQ 245
Score = 62.0 bits (149), Expect = 1e-11
Identities = 26/231 (11%), Positives = 61/231 (26%), Gaps = 25/231 (10%)
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS 153
F T+ +A PD +I V + + DG G +G +A +
Sbjct: 24 FPVNTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSG-------LAFT 76
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+ ++ + N + + + + N I + + +
Sbjct: 77 SNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLN---------GITPLSDTQYL 127
Query: 214 VSDSNNHRVQIFDVNGRV-----ITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
+DS + + DV + + E G+ ++ V ++
Sbjct: 128 TADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG-NFLYVSNTEKML 186
Query: 269 IQIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ D ++ A GN+ + +
Sbjct: 187 LLRIPVDSTDKPGEPEIFVEQT---NIDDFAFDVEGNLYGATHIYNSVVRI 234
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 69.7 bits (169), Expect = 4e-14
Identities = 27/261 (10%), Positives = 60/261 (22%), Gaps = 10/261 (3%)
Query: 52 PGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSI 111
G+ + + D + P P I + D +
Sbjct: 36 SKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRL 95
Query: 112 VVADSSNHRVQVFQSDGTFVGK-FGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQI 170
V + + T G + + + +D +
Sbjct: 96 FVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP 155
Query: 171 FDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 230
V T ++ G + V+++ +R+ +
Sbjct: 156 LGGVYYVSPDFRTVTPIIQNISVANGIALSTDE------KVLWVTETTANRLHRIALEDD 209
Query: 231 VIT---SFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGS 287
+T + + P +D + V G R+ +F G + G
Sbjct: 210 GVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGR 269
Query: 288 GDGEFKGLEGVAVMSNGNILV 308
+G + N L+
Sbjct: 270 DEGHMLRSTHPQFIPGTNQLI 290
Score = 53.2 bits (126), Expect = 1e-08
Identities = 21/228 (9%), Positives = 50/228 (21%), Gaps = 15/228 (6%)
Query: 96 AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 155
G+ + + D + + + + +P I +
Sbjct: 38 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF-----VSHKANPAAIKIHKD 92
Query: 156 NRVIVSDSNNHR----VQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR 211
R+ V + + + NG Q + + + + Y
Sbjct: 93 GRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYS 152
Query: 212 VIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQI 271
+ F +I + + +RI +
Sbjct: 153 TNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANR------LHRIAL 206
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+G + + S+ N+ V R+ VF
Sbjct: 207 EDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVF 254
Score = 41.2 bits (95), Expect = 9e-05
Identities = 14/110 (12%), Positives = 32/110 (29%), Gaps = 5/110 (4%)
Query: 210 NRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRI 269
+ S +N V I + + + G+ D QG + + D I
Sbjct: 4 PTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNI 63
Query: 270 QIFTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
P+ + ++ + + +G + VC + +
Sbjct: 64 FKINPETKEIKRPFVSHKA-----NPAAIKIHKDGRLFVCYLGDFKSTGG 108
Score = 35.1 bits (79), Expect = 0.009
Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Query: 94 FLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA-V 152
F P + D+++ VA RV VF G +G+ G G + + +
Sbjct: 224 FTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFI 283
Query: 153 SNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVG 186
TN++I+ ++ ++ +G G
Sbjct: 284 PGTNQLIICSNDIE----MGGGSMLYTVNGFAKG 313
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase
(phosphotriesterase, DFP) {Squid (Loligo vulgaris)
[TaxId: 6622]}
Length = 314
Score = 52.7 bits (125), Expect = 1e-08
Identities = 40/285 (14%), Positives = 82/285 (28%), Gaps = 26/285 (9%)
Query: 55 FTWPRGIAVGPDNSIVVADSSNHRVQVCFPH---FDLKTNCVFLAFT--------WPRGI 103
G + + DLKT + P G
Sbjct: 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGC 76
Query: 104 AVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 163
D + + + V Q+DGTF +++ + A + ++
Sbjct: 77 QCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGR-RMQGCNDCAFDYEGNLWITAP 135
Query: 164 NNHRVQIFDVNGRVFQS-DGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-----RVIVSDS 217
+ G M + P+ IAV + N ++IV+++
Sbjct: 136 AGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAET 195
Query: 218 NNHRVQIFDVNGRVITSFGS--EGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPD 275
++ +D+ G G+ D+ + V + G++ I++F PD
Sbjct: 196 PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPD 255
Query: 276 GQFLRAFGCWGSGDGEFKGLEGVAVMSNGNIL-VCDRENHRIQVF 319
G + F+ + + V + EN+ + F
Sbjct: 256 GGQPK-----MRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKF 295
Score = 36.2 bits (82), Expect = 0.004
Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 1/78 (1%)
Query: 51 EPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPD-N 109
G+ DN+++VA+ + ++V P + F P + P
Sbjct: 221 PGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTK 280
Query: 110 SIVVADSSNHRVQVFQSD 127
+I V + N+ V F+
Sbjct: 281 TIFVTEHENNAVWKFEWQ 298
Score = 25.4 bits (54), Expect = 9.8
Identities = 6/36 (16%), Positives = 10/36 (27%), Gaps = 7/36 (19%)
Query: 291 EFKGLEGVAVMSNGNILVC-------DRENHRIQVF 319
+ G EG NG+ + + I
Sbjct: 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRI 51
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Length = 263
Score = 49.1 bits (116), Expect = 2e-07
Identities = 30/207 (14%), Positives = 59/207 (28%), Gaps = 30/207 (14%)
Query: 53 GCFTWPRGIAVGPDNS-IVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSI 111
P GIA+ I DS R++V + PRGI P
Sbjct: 76 QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGN 135
Query: 112 VV---ADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTN-RVIVSDSNNHR 167
+ + N +++ DGT P+ + + ++ D+ HR
Sbjct: 136 LYWTDWNRDNPKIETSHMDGTNRRILAQDNLG-----LPNGLTFDAFSSQLCWVDAGTHR 190
Query: 168 VQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 227
+ + V L++P + + +D + V D+
Sbjct: 191 AECLNPAQ----PGRRKV---------LEGLQYPFAVTSYG-KNLYYTDWKTNSVIAMDL 236
Query: 228 -NGRVITSFGSEGSEEGQLKFPRGVAV 253
+ + +F G+ +
Sbjct: 237 AISKEMDTFHPHKQTR-----LYGITI 258
Score = 41.8 bits (97), Expect = 5e-05
Identities = 32/220 (14%), Positives = 63/220 (28%), Gaps = 40/220 (18%)
Query: 108 DNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVS-DSNNH 166
D + D S + L P IA+ + R I DS
Sbjct: 47 DKVVYWTDISEPSIGRASLH-----GGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLD 101
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIV---SDSNNHRVQ 223
R+++ ++G + L +P I + + +N +++
Sbjct: 102 RIEVAKMDGTQRRVLFD------------TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIE 149
Query: 224 IFDVNGRVITSFGSEGSEEGQLKFPRGVAVD-DQGYISVGDSGNNRIQIFTPDGQFLRAF 282
++G + L P G+ D + D+G +R + P R
Sbjct: 150 TSHMDGTNRRILAQD-----NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKV 204
Query: 283 GCWGSGDGEFKGLE---GVAVMSNGNILVCDRENHRIQVF 319
+GL+ V N+ D + + +
Sbjct: 205 ---------LEGLQYPFAVTSY-GKNLYYTDWKTNSVIAM 234
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 47.4 bits (111), Expect = 8e-07
Identities = 18/184 (9%), Positives = 54/184 (29%), Gaps = 13/184 (7%)
Query: 60 GIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT-----WPRGIAVGPDNS-IVV 113
G A+ + ++ + + + V D+ ++ V+ + P + PDN V
Sbjct: 1 GPALKAGHEYMIVTNYPNNLHV----VDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYV 56
Query: 114 ADSSNHRVQVFQSDGTFVGKFGSMG-NKAGQLEHPHYIAVS-NTNRVIVSDSNNHRVQIF 171
++ + D ++ + A+S + V + + R+
Sbjct: 57 LNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDH 116
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
V + + + + Y+ + + + + + G+
Sbjct: 117 YVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYK-MDVKTGKY 175
Query: 232 ITSF 235
+
Sbjct: 176 TVAL 179
Score = 32.8 bits (73), Expect = 0.046
Identities = 22/262 (8%), Positives = 51/262 (19%), Gaps = 20/262 (7%)
Query: 57 WPRGIAVGPDNS-IVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRG-IAVGPDNSIVVA 114
P + PDN V ++ + DL T VG
Sbjct: 41 GPGTAMMAPDNRTAYVLNNHYGDIYG----IDLDTCKNTFHANLSSVPGEVGRSMYSFAI 96
Query: 115 DSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 174
V + + + ++ + R + +
Sbjct: 97 SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP-RQVYLMRAADD 155
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVITS 234
G ++ + G L ++ R S + +
Sbjct: 156 GSLYVAGPDIYKMDVKTGKYTVALPLRNWN------RKGYSAPDVLYFWPHQSPRHEFSM 209
Query: 235 FGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQFLRAFGCWGSGDGEFKG 294
+ + + P + +G Q F +
Sbjct: 210 LYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP----- 264
Query: 295 LEGVAVMSNGNILVCDRENHRI 316
+ D + ++
Sbjct: 265 --NQIYGVLNRLAKYDLKQRKL 284
Score = 28.6 bits (62), Expect = 1.1
Identities = 13/165 (7%), Positives = 30/165 (18%), Gaps = 7/165 (4%)
Query: 9 NINSCFLLQTLLVSGIGQVGTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNS 68
++T + + R Y L F +
Sbjct: 163 PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQD 222
Query: 69 IVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDG 128
AD + V T P + + N +
Sbjct: 223 PATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQR 282
Query: 129 TFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 173
+ + +A + + + +F+
Sbjct: 283 KLIKAANLDHT-------YYCVAFDKKGDKLYLGGTFNDLAVFNP 320
Score = 26.6 bits (57), Expect = 4.4
Identities = 17/180 (9%), Positives = 36/180 (20%), Gaps = 14/180 (7%)
Query: 57 WPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADS 116
+ D S+ VA +++ V K W R PD
Sbjct: 146 QVYLMRAADDGSLYVAGPDIYKMDV----KTGKYTVALPLRNWNRKGYSAPDVLYFWPHQ 201
Query: 117 SNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNG- 175
S L + + T + + + F
Sbjct: 202 SPRHEFSMLYTIARFKDDKQDPA-TADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRS 260
Query: 176 -----RVFQSDGTFVGKFGSMGNKAGQLEHPHY---IAVSNTNRVIVSDSNNHRVQIFDV 227
+++ H +A + + + +F+
Sbjct: 261 PKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNP 320
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 40.6 bits (93), Expect = 1e-04
Identities = 17/164 (10%), Positives = 44/164 (26%), Gaps = 10/164 (6%)
Query: 61 IAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIV-VADSSNH 119
+A + +VV D+ V K + A P V P I + +
Sbjct: 5 LAPARPDKLVVIDTEKMAV--------DKVITIADAGPTPMVPMVAPGGRIAYATVNKSE 56
Query: 120 RVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQ 179
+ + +++ A+S + + + R+++ + +
Sbjct: 57 SLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTR 116
Query: 180 SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQ 223
+ + S +A + + + V
Sbjct: 117 VA-LYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVM 159
Score = 35.6 bits (80), Expect = 0.005
Identities = 20/208 (9%), Positives = 41/208 (19%), Gaps = 9/208 (4%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNS-IV 112
+A D S + + V ++ +W PD +
Sbjct: 133 APRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVED---KPIQSWEAETYAQPDVLAVW 189
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 172
S+ + L R + + +
Sbjct: 190 NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVN 249
Query: 173 VNGRVFQSDGTFVGKF-GSMGNKAGQLEHPHY---IAVSNTNRVIVSDSNNHRVQIFDV- 227
+ F ++ PH + VS + + +D
Sbjct: 250 PAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAE 309
Query: 228 NGRVITSFGSEGSEEGQLKFPRGVAVDD 255
G+ L R D+
Sbjct: 310 TLEKKGQVDLPGNASMSLASVRLFTRDE 337
Score = 35.2 bits (79), Expect = 0.007
Identities = 22/269 (8%), Positives = 55/269 (20%), Gaps = 45/269 (16%)
Query: 52 PGCFTWPRGIAVGPDNSIV-VADSSNHRVQVCFPHFDLKTNCVFLAFTWP---------R 101
P V P I + + + DL T
Sbjct: 30 ADAGPTPMVPMVAPGGRIAYATVNKSESLVK----IDLVTGETLGRIDLSTPEERVKSLF 85
Query: 102 GIAVGPDNSIVVADSSNHRVQVFQSDGTFV------GKFGSMGNKAGQLEHPHYIAVSNT 155
G A+ PD + S R+++ + + S +A +
Sbjct: 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARD 145
Query: 156 NRVIVSDSNNHRV---------QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAV 206
+ + V + + ++ +++ + +
Sbjct: 146 GSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTA 205
Query: 207 SNTNRVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQ----LKFPRGVAVDDQGYISVG 262
+ + D+ + + + + A +
Sbjct: 206 RKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESF 265
Query: 263 DSGNNRIQ------------IFTPDGQFL 279
D N + DG +
Sbjct: 266 DLEKNASIKRVPLPHSYYSVNVSTDGSTV 294
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 39.0 bits (89), Expect = 5e-04
Identities = 29/220 (13%), Positives = 73/220 (33%), Gaps = 9/220 (4%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVV 113
+ + ++ D ++ + D + + D T A D ++ V
Sbjct: 172 FPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRV 231
Query: 114 ADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 173
DS + G G + + + + + +VS S + V+++++
Sbjct: 232 WDSETGFLVERLDSENESGT--------GHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNL 283
Query: 174 NGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV-NGRVI 232
+SD G + +A + + I+S S + V +D +G +
Sbjct: 284 QNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPL 343
Query: 233 TSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
+ + G ++ + + SG+ + +I+
Sbjct: 344 LMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIW 383
Score = 37.5 bits (85), Expect = 0.002
Identities = 25/179 (13%), Positives = 51/179 (28%), Gaps = 17/179 (9%)
Query: 57 WPRGIAVG-PDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVAD 115
+ IA G D ++ V DS D + + D VV+
Sbjct: 216 DGKYIAAGSLDRAVRVWDSETGF---LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 272
Query: 116 SSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHY-------IAVSNTNRVIVSDSNNHRV 168
S + V+++ N +A + + I+S S + V
Sbjct: 273 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGV 332
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDV 227
+D G + N + + ++ V + S + + +I+
Sbjct: 333 LFWDKK------SGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
Score = 32.8 bits (73), Expect = 0.049
Identities = 15/134 (11%), Positives = 40/134 (29%), Gaps = 13/134 (9%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVC------------FPHFDLKTNCVFLAFTWP 100
G + D VV+ S + V++ P+ +
Sbjct: 252 GHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFV 311
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ-SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
+A ++ +++ S + V + G + N + + ++ V
Sbjct: 312 LSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVF 371
Query: 160 VSDSNNHRVQIFDV 173
+ S + + +I+
Sbjct: 372 ATGSGDCKARIWKY 385
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 38.2 bits (87), Expect = 0.001
Identities = 14/128 (10%), Positives = 42/128 (32%), Gaps = 15/128 (11%)
Query: 99 WPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRV 158
I P+ + S + ++F S N + ++ S + R+
Sbjct: 228 DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI---TSVSFSKSGRL 284
Query: 159 IVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSN 218
+++ ++ ++D G N+ + V++ + + S
Sbjct: 285 LLAGYDDFNCNVWDA------LKADRAGVLAGHDNRV------SCLGVTDDGMAVATGSW 332
Query: 219 NHRVQIFD 226
+ ++I++
Sbjct: 333 DSFLKIWN 340
Score = 28.2 bits (61), Expect = 1.3
Identities = 13/124 (10%), Positives = 38/124 (30%), Gaps = 17/124 (13%)
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
I + S++ ++FD+ + + ++ S +
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI----------TSVSFSKS 281
Query: 210 NRVIVSDSNNHRVQIFDV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNR 268
R++++ ++ ++D G + V D G S ++
Sbjct: 282 GRLLLAGYDDFNCNVWDALKADRAGVL------AGHDNRVSCLGVTDDGMAVATGSWDSF 335
Query: 269 IQIF 272
++I+
Sbjct: 336 LKIW 339
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 38.0 bits (87), Expect = 0.001
Identities = 26/236 (11%), Positives = 56/236 (23%), Gaps = 15/236 (6%)
Query: 58 PRGIAVGPD--NSIVVADSSNHRVQVCFPHFDLKTNCVFLAFT---WPRGIAVGPDNSIV 112
P+ D N V ++ + D + + + +
Sbjct: 21 PKKQLNDLDLPNLFSVTLRDAGQIAL----VDGDSKKIVKVIDTGYAVHISRMSASGRYL 76
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNR-VIVSDSNNHRVQIF 171
+ + R+ + K + +R I + I
Sbjct: 77 LVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIM 136
Query: 172 DVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRV 231
D + + G + IA IV+ +V + +
Sbjct: 137 DGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDID 196
Query: 232 ITSFGSEGSEEGQLKFPRGVAVD-DQGYISVGDSGNNRIQIFTPDGQFLRAFGCWG 286
+ S G+ F D Y + +N++ + + L A G
Sbjct: 197 NLTVTSIGAA----PFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVG 248
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 36.3 bits (82), Expect = 0.004
Identities = 20/172 (11%), Positives = 55/172 (31%), Gaps = 19/172 (11%)
Query: 61 IAVGPDNSIVVADSSNHRVQVCFP-HFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNH 119
+ D ++ V + + H + + + I+ + +
Sbjct: 159 ASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGP 218
Query: 120 RVQVFQSDGTFVGKFGSMGNKAGQLE-HPHYI---AVSNTNRVIVSDSNNHRVQIFDV-N 174
+ D T S G L H +++ + + I+S +++ ++++D N
Sbjct: 219 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 278
Query: 175 GRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
R + T + + T +V+ S + V++++
Sbjct: 279 KRCMK---TLNAHEHFV----------TSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 32.4 bits (72), Expect = 0.066
Identities = 27/228 (11%), Positives = 75/228 (32%), Gaps = 18/228 (7%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIV 112
G +++ P+ +V+ S + +++ W R + D +++
Sbjct: 99 GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 158
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 172
+ S++ V+V+ + + ++ +S++ +
Sbjct: 159 ASCSNDQTVRVWVVATKEC----KAELREHRHVVECISWAPESSYSSISEATGSETKKSG 214
Query: 173 VNGRVFQS---DGTFVGKFGSMGNKAGQLE-HPHYI---AVSNTNRVIVSDSNNHRVQIF 225
G S D T S G L H +++ + + I+S +++ ++++
Sbjct: 215 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 274
Query: 226 DV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF 272
D N R + + F + V S + ++++
Sbjct: 275 DYKNKRCMKTL------NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316
Score = 32.0 bits (71), Expect = 0.078
Identities = 13/133 (9%), Positives = 43/133 (32%), Gaps = 7/133 (5%)
Query: 41 LQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWP 100
+ + S S T G +++ S + +++ + + W
Sbjct: 191 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 250
Query: 101 RGIAVGPDNSIVVADSSNHRVQVFQ-SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
RG+ +++ + + ++V+ + + + T +
Sbjct: 251 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL------NAHEHFVTSLDFHKTAPYV 304
Query: 160 VSDSNNHRVQIFD 172
V+ S + V++++
Sbjct: 305 VTGSVDQTVKVWE 317
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing
enzyme {Neurospora crassa [TaxId: 5141]}
Length = 365
Score = 36.0 bits (82), Expect = 0.004
Identities = 20/197 (10%), Positives = 54/197 (27%), Gaps = 25/197 (12%)
Query: 58 PRGIAVGPDNSIVVADSSNH---RVQVCFPHFDLKTNCVFLAFT---WPRGIAVGPDNSI 111
G+ P + + + +++ A PR +A+ P +
Sbjct: 147 IHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNY 206
Query: 112 V-VADSSNHRVQVFQSDG--------------TFVGKFGSMGNKAGQLEHPHYIAVSNTN 156
+ + +R+ + D G L A++ +
Sbjct: 207 LYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSG 266
Query: 157 R-VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT--NRVI 213
+ + S N + G + G+ + K + H + ++ +
Sbjct: 267 KYMFASSRANKFELQGYIAGFKLRDCGS-IEKQLFLSPTPTSGGHSNAVSPCPWSDEWMA 325
Query: 214 VSDSNNHRVQIFDVNGR 230
++D ++I+
Sbjct: 326 ITDDQEGWLEIYRWKDE 342
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 33.6 bits (75), Expect = 0.026
Identities = 8/82 (9%), Positives = 27/82 (32%), Gaps = 13/82 (15%)
Query: 146 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
+ + + VS ++ + + G + + +
Sbjct: 267 CVLSLKFAYCGKWFVSTGKDNLLNAWRTP------YGASIFQSKESSS-------VLSCD 313
Query: 206 VSNTNRVIVSDSNNHRVQIFDV 227
+S ++ IV+ S + + +++V
Sbjct: 314 ISVDDKYIVTGSGDKKATVYEV 335
Score = 32.5 bits (72), Expect = 0.059
Identities = 9/101 (8%), Positives = 30/101 (29%), Gaps = 12/101 (11%)
Query: 76 NHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFG 135
+ L + + V+ ++ + +++
Sbjct: 244 ESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP-------- 295
Query: 136 SMGNKAGQLEHPHYI---AVSNTNRVIVSDSNNHRVQIFDV 173
G Q + + +S ++ IV+ S + + +++V
Sbjct: 296 -YGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
Score = 25.9 bits (55), Expect = 6.9
Identities = 11/75 (14%), Positives = 23/75 (30%), Gaps = 10/75 (13%)
Query: 200 HPHYIAVSNTNRVIVSDSNNHRVQIFDV-NGRVITSFGSEGSEEGQLKFPRGVAVD-DQG 257
+ + + VS ++ + + G I S + D
Sbjct: 267 CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSS-------VLSCDISVDDK 319
Query: 258 YISVGDSGNNRIQIF 272
YI G SG+ + ++
Sbjct: 320 YIVTG-SGDKKATVY 333
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 340
Score = 33.2 bits (75), Expect = 0.039
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 11/81 (13%)
Query: 54 CFTWPRGIAVGPD-NSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTW------PRGIAVG 106
F + GI + PD + +A+ H++ V ++ N I+V
Sbjct: 204 GFDFANGINISPDGKYVYIAELLAHKIHV----YEKHANWTLTPLRVLSFDTLVDNISVD 259
Query: 107 PDNSIVVADSSNHRVQVFQSD 127
P + + +++F D
Sbjct: 260 PVTGDLWVGCHPNGMRIFFYD 280
Score = 31.6 bits (71), Expect = 0.10
Identities = 21/213 (9%), Positives = 56/213 (26%), Gaps = 30/213 (14%)
Query: 58 PRGIAVG--PDNSIVVADSSNHRVQVCFPHFDLKTNCVFL---------AFTWPRGIAVG 106
P GI+ DN++ + ++ F + L I
Sbjct: 99 PHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAV 158
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNK---------AGQLEHPHYIAVS-NTN 156
+ +S +G S A + + I +S +
Sbjct: 159 GPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGK 218
Query: 157 RVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSD 216
V +++ H++ +++ + + + + N + + N + +
Sbjct: 219 YVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNGMRIFF 278
Query: 217 SNNHRVQIFDV---------NGRVITSFGSEGS 240
+ +V +V + G+
Sbjct: 279 YDAENPPGSEVLRIQDILSEEPKVTVVYAENGT 311
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 32.5 bits (72), Expect = 0.051
Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 8/58 (13%)
Query: 71 VADSSNHRVQVCFPHFDLKTNCVFLAFT---WPRGIAVGPDNS-IVVADSSNHRVQVF 124
+A+S + + V D+ +N V P G + PD + + VA++ ++ V +
Sbjct: 6 IANSESDNISV----IDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSII 59
Score = 31.8 bits (70), Expect = 0.11
Identities = 11/72 (15%), Positives = 27/72 (37%), Gaps = 14/72 (19%)
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSD 216
+++S + + + DV + N P +S + +V V++
Sbjct: 4 AYIANSESDNISVIDV------TSNKVTATIPVGSN-------PMGAVISPDGTKVYVAN 50
Query: 217 SNNHRVQIFDVN 228
++++ V I D
Sbjct: 51 AHSNDVSIIDTA 62
Score = 31.0 bits (68), Expect = 0.15
Identities = 23/185 (12%), Positives = 49/185 (26%), Gaps = 17/185 (9%)
Query: 53 GCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIV 112
P G+A+ PD + ++ + P+GIAV PD
Sbjct: 113 KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDG--- 169
Query: 113 VADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 172
+ + ++ + N + + F+
Sbjct: 170 -----TKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFN 224
Query: 173 VNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSNNHRVQIFDV-NGR 230
+ + + P IAV+ + +V V+ S + V + D
Sbjct: 225 TVSMIDTGTNKITARIPVGPD-------PAGIAVTPDGKKVYVALSFCNTVSVIDTATNT 277
Query: 231 VITSF 235
+ +
Sbjct: 278 ITATM 282
Score = 30.2 bits (66), Expect = 0.30
Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 9/64 (14%)
Query: 113 VADSSNHRVQVFQSD-GTFVGKFGSMGNKAGQLEHPHYIAVS-NTNRVIVSDSNNHRVQI 170
+A+S + + V N P +S + +V V++++++ V I
Sbjct: 6 IANSESDNISVIDVTSNKVTATIPVGSN-------PMGAVISPDGTKVYVANAHSNDVSI 58
Query: 171 FDVN 174
D
Sbjct: 59 IDTA 62
Score = 29.5 bits (64), Expect = 0.50
Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 5/46 (10%)
Query: 58 PRGIAVGPDNS-IVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRG 102
P G + PD + + VA++ ++ V + D TN V
Sbjct: 34 PMGAVISPDGTKVYVANAHSNDVSI----IDTATNNVIATVPAGSS 75
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 266
Score = 31.8 bits (71), Expect = 0.080
Identities = 27/168 (16%), Positives = 49/168 (29%), Gaps = 18/168 (10%)
Query: 154 NTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVI 213
+NR+ SD + + ++ S V ++ P +AV + I
Sbjct: 40 ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD--------IQAPDGLAVDWIHSNI 91
Query: 214 -VSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVAVD-DQGYISVGDSGNNRIQI 271
+DS V + D G + E + PR + VD G++ D G
Sbjct: 92 YWTDSVLGTVSVADTKGVKRKTLFRENGSK-----PRAIVVDPVHGFMYWTDWGTPAKIK 146
Query: 272 FTPDGQFLRAFGCWGSGDGEFKGLEGVAVMSNGNILVCDRENHRIQVF 319
+ + +G + D + H I
Sbjct: 147 KGGLNGVDIYSLVT---ENIQWPNGITLDLLSGRLYWVDSKLHSISSI 191
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 31.4 bits (69), Expect = 0.14
Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 10/77 (12%)
Query: 150 IAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNT 209
A + I NNH V I++ +G + G + + +
Sbjct: 13 HAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQV----------TGVDWAPD 62
Query: 210 NRVIVSDSNNHRVQIFD 226
+ IV+ + ++
Sbjct: 63 SNRIVTCGTDRNAYVWT 79
>d1ybha3 c.36.1.9 (A:460-667) Acetohydroxyacid synthase catalytic
subunit {Thale cress (Arabidopsis thaliana), chloroplast
[TaxId: 3702]}
Length = 208
Score = 29.4 bits (65), Expect = 0.38
Identities = 8/83 (9%), Positives = 22/83 (26%), Gaps = 1/83 (1%)
Query: 65 PDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
+I+ H++ ++ K +L+ + G +I + ++ + V
Sbjct: 17 DGKAIISTGVGQHQMWAA-QFYNYKKPRQWLSSGGLGAMGFGLPAAIGASVANPDAIVVD 75
Query: 125 QSDGTFVGKFGSMGNKAGQLEHP 147
P
Sbjct: 76 IDGDGSFIMNVQELATIRVENLP 98
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 29.8 bits (65), Expect = 0.44
Identities = 8/150 (5%), Positives = 28/150 (18%), Gaps = 10/150 (6%)
Query: 28 GTTPRSQYLQKRRLQFKIGSRGSEPGCFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFD 87
+ + F I P + D + D
Sbjct: 206 DRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGD 265
Query: 88 LKTNCVFL-AFTWPRGIAVGPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEH 146
+ + G + + + +
Sbjct: 266 YRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT---------RKVTEVKNN 316
Query: 147 PHYIAVSNTNRVIVSDSNNHRVQIFDVNGR 176
+ +S + ++ ++ ++ F +
Sbjct: 317 LTDLRLSADRKTVMVRKDDGKIYTFPLEKP 346
Score = 29.1 bits (63), Expect = 0.65
Identities = 13/206 (6%), Positives = 41/206 (19%), Gaps = 24/206 (11%)
Query: 30 TPRSQYLQKRRLQFKIGSRGSEPGCFTWPRG---IAVGPDNSIVVADSSNHRVQVCFPHF 86
++ R++ + + + D V
Sbjct: 160 AIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDR---VVLNFSFEV 216
Query: 87 DLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNH--RVQVFQSDGTFVGKFGSMGNKAGQL 144
K + L P + P + A + + G + + +
Sbjct: 217 VSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSI 276
Query: 145 EHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYI 204
+ +DV + +
Sbjct: 277 LIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT----------------RKVTEVKNNLTDL 320
Query: 205 AVSNTNRVIVSDSNNHRVQIFDVNGR 230
+S + ++ ++ ++ F +
Sbjct: 321 RLSADRKTVMVRKDDGKIYTFPLEKP 346
>d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 173
Score = 28.6 bits (63), Expect = 0.73
Identities = 8/69 (11%), Positives = 17/69 (24%), Gaps = 7/69 (10%)
Query: 112 VVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIF 171
+ H + GS+ G + Y + D + +V
Sbjct: 105 ICLYGHLHVPSAWLEGKILFLNPGSISQPRGTIRECLYA-------RVEIDDSYFKVDFL 157
Query: 172 DVNGRVFQS 180
+ V+
Sbjct: 158 TRDHEVYPG 166
>d1pvda3 c.36.1.9 (A:361-556) Pyruvate decarboxylase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 28.6 bits (63), Expect = 0.78
Identities = 9/117 (7%), Positives = 32/117 (27%), Gaps = 6/117 (5%)
Query: 65 PDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
+ +V+A++ N ++ I ++ A ++
Sbjct: 19 QEGDVVIAETGTS--AFGINQTTFPNNTYGISQVLWGSIGFTTGATLGAAFAAEEI---- 72
Query: 125 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSD 181
+ G + E I + V +++ + ++ + ++
Sbjct: 73 DPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIEKLIHGPKAQYNE 129
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 28.3 bits (61), Expect = 1.2
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 6/77 (7%)
Query: 200 HPHYIAVSNTNRVIVSDSNNHRVQIFDV-NGRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
+ S I S S + ++I++V +V + E Q G+ Q
Sbjct: 240 SVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQ---LGIIWTKQAL 296
Query: 259 ISVGDSGNNRIQIFTPD 275
+S+ +G I P+
Sbjct: 297 VSISANGF--INFVNPE 311
Score = 26.8 bits (57), Expect = 3.8
Identities = 12/81 (14%), Positives = 25/81 (30%), Gaps = 11/81 (13%)
Query: 146 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
+ S I S S + ++I++V + G +
Sbjct: 240 SVFGLTWSPDGTKIASASADKTIKIWNV------ATLKVEKTI-----PVGTRIEDQQLG 288
Query: 206 VSNTNRVIVSDSNNHRVQIFD 226
+ T + +VS S N + +
Sbjct: 289 IIWTKQALVSISANGFINFVN 309
Score = 25.6 bits (54), Expect = 9.2
Identities = 14/120 (11%), Positives = 33/120 (27%), Gaps = 6/120 (5%)
Query: 54 CFTWPRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVV 113
P G N F+ + G+ PD + +
Sbjct: 195 VRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA 254
Query: 114 ADSSNHRVQVFQ-SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 172
+ S++ ++++ + G + + T + +VS S N + +
Sbjct: 255 SASADKTIKIWNVATLKVEKTI-----PVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 28.2 bits (61), Expect = 1.2
Identities = 23/228 (10%), Positives = 51/228 (22%), Gaps = 17/228 (7%)
Query: 62 AVGPDNS-IVVADSSNHRVQVCFPHFDLKTNCVF--LAFTWPRGIAVGPDNS-IVVADSS 117
A PD + V D ++ D + V + + V D S I A +
Sbjct: 8 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTV 67
Query: 118 NHRVQVFQSDGTFV-----------GKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNH 166
R+ + + +P +++ + ++ +
Sbjct: 68 FSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP 127
Query: 167 RVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFD 226
+ V+ ++ + + V+ +I
Sbjct: 128 APAVGVVDLEGKAFKRMLDVPDCYHIFPTA--PDTFFMHCRDGSLAKVAFGTEGTPEITH 185
Query: 227 VNGRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIFTP 274
K R V G I D + +
Sbjct: 186 TEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPA 233
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 27.9 bits (60), Expect = 1.6
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 98 TWPRGIAVGPDNS-IVVADSSNHRVQVFQSDGT 129
T PRG V ++ A +H + V++ G
Sbjct: 276 TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGE 308
Score = 27.1 bits (58), Expect = 3.3
Identities = 35/274 (12%), Positives = 67/274 (24%), Gaps = 19/274 (6%)
Query: 57 WPRGIAVGPDNSIV-VADSSNHRVQVCFPHFDLKTNCVFLAFTW-------PRGIAVGPD 108
+ + V PD + V RV + + + L F I+
Sbjct: 38 QVQPMVVSPDKRYLYVGVRPEFRVLA----YRIAPDDGALTFAAESALPGSLTHISTDHQ 93
Query: 109 NSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRV 168
V S N + + H I+ N + + +
Sbjct: 94 GQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRIC 153
Query: 169 QIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVN 228
+ + + HP+ N + S
Sbjct: 154 LFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNI 213
Query: 229 GRVITSFGSEGSEEGQLKFPRGVAVDDQGYISVGDSGNNRIQIF--TPDGQFLRAFGCWG 286
V T + D ++ D + I +F + DG L G
Sbjct: 214 ECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP 273
Query: 287 SGDGEFKGLEGVAVMSNGN-ILVCDRENHRIQVF 319
+ G V +G ++ +++H I V+
Sbjct: 274 TET----QPRGFNVDHSGKYLIAAGQKSHHISVY 303
>d1s48a_ e.8.1.4 (A:) Viral RNA polymerase {Bovine viral diarrhea
virus [TaxId: 11099]}
Length = 588
Score = 27.9 bits (62), Expect = 1.8
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 267 NRIQIFTPDGQFLRAFGCWGSGD 289
+ + T DG+ G GSG
Sbjct: 294 TEVPVITADGEVYIRNGQRGSGQ 316
>d1q6za3 c.36.1.9 (A:342-524) Benzoylformate decarboxylase
{Pseudomonas putida [TaxId: 303]}
Length = 183
Score = 27.3 bits (59), Expect = 1.9
Identities = 10/60 (16%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 107 PDNSIVVADSSNHRVQVFQ---SDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDS 163
P+N+I + +S++ Q++Q F + G L + ++ R +++
Sbjct: 26 PENAIYLNESTSTTAQMWQRLNMRNPGSYYFCAAGGLGFALPAAIGVQLAEPERQVIAVI 85
>d2djia3 c.36.1.9 (A:364-592) Pyruvate oxidase {Aerococcus viridans
[TaxId: 1377]}
Length = 229
Score = 27.2 bits (59), Expect = 2.5
Identities = 8/67 (11%), Positives = 15/67 (22%), Gaps = 7/67 (10%)
Query: 107 PDNSIVVADSSNHRVQVFQ-----SDGTFV--GKFGSMGNKAGQLEHPHYIAVSNTNRVI 159
+++I D N + + F +MG I
Sbjct: 17 DEDAIYSIDVGNSTQTSIRHLHMTPKNMWRTSPLFATMGIAIPGGLGAKNTYPDRQVWNI 76
Query: 160 VSDSNNH 166
+ D
Sbjct: 77 IGDGAFS 83
>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase
{Acinetobacter calcoaceticus [TaxId: 471]}
Length = 450
Score = 27.3 bits (59), Expect = 3.0
Identities = 19/156 (12%), Positives = 47/156 (30%), Gaps = 18/156 (11%)
Query: 141 AGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLE- 199
L PH + N++ +++ ++ + ++ + G L
Sbjct: 23 LSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGF 82
Query: 200 --HPHYIAVS------------NTNRVIVSDSNNHRVQIF---DVNGRVITSFGSEGSEE 242
HP + +T++ + + + R D + + S +
Sbjct: 83 AFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSK 142
Query: 243 GQLKFPRGVAVDDQGYISVGDSGNNRIQIFTPDGQF 278
+ D + Y ++GD G N++ Q
Sbjct: 143 DHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQA 178
Score = 26.9 bits (58), Expect = 3.6
Identities = 19/148 (12%), Positives = 41/148 (27%), Gaps = 22/148 (14%)
Query: 58 PRGIAVGPDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPR------------GIAV 105
P + GPDN I + + + ++ + ++ V F P G A
Sbjct: 29 PHALLWGPDNQIWLTERATGKILR----VNPESGSVKTVFQVPEIVNDADGQNGLLGFAF 84
Query: 106 GPDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNN 165
PD +N + + + + N+ + + + + + +
Sbjct: 85 HPD------FKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGL 138
Query: 166 HRVQIFDVNGRVFQSDGTFVGKFGSMGN 193
+ V D G G
Sbjct: 139 PSSKDHQSGRLVIGPDQKIYYTIGDQGR 166
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 27.2 bits (58), Expect = 3.1
Identities = 9/72 (12%), Positives = 25/72 (34%), Gaps = 4/72 (5%)
Query: 200 HPHYIAVSNTNRVIVSDSNNHRVQIFDVN-GRVITSFGSEGSEEGQLKFPRGVAVDDQGY 258
+ ++ + + ++++DV + + + + + G + GV G
Sbjct: 253 GGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQV--GVVATGNGR 310
Query: 259 I-SVGDSGNNRI 269
I S+ G
Sbjct: 311 IISLSLDGTLNF 322
Score = 26.0 bits (55), Expect = 6.1
Identities = 10/82 (12%), Positives = 29/82 (35%), Gaps = 9/82 (10%)
Query: 146 HPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 205
+ ++ + + ++++DV + V K+ + G
Sbjct: 253 GGIFALSWLDSQKFATVGADATIRVWDV------TTSKCVQKWTLDKQQLGNQ---QVGV 303
Query: 206 VSNTNRVIVSDSNNHRVQIFDV 227
V+ N I+S S + + +++
Sbjct: 304 VATGNGRIISLSLDGTLNFYEL 325
>d2ihta3 c.36.1.9 (A:375-572) Carboxyethylarginine synthase
{Streptomyces clavuligerus [TaxId: 1901]}
Length = 198
Score = 26.8 bits (58), Expect = 3.2
Identities = 8/42 (19%), Positives = 11/42 (26%), Gaps = 7/42 (16%)
Query: 104 AVGPDNSIVVADSSNHRVQVFQ-----SDGTFV--GKFGSMG 138
A P +V+D R F+ S G
Sbjct: 24 AAEPGEGTIVSDIGFFRHYGVLFARADQPFGFLTSAGCSSFG 65
>d1ozha3 c.36.1.9 (A:367-558) Catabolic acetolactate synthase
{Klebsiella pneumoniae [TaxId: 573]}
Length = 192
Score = 26.5 bits (57), Expect = 3.9
Identities = 5/45 (11%), Positives = 14/45 (31%)
Query: 107 PDNSIVVADSSNHRVQVFQSDGTFVGKFGSMGNKAGQLEHPHYIA 151
+ + D + + + + TF + + N + A
Sbjct: 19 NSDVTLTVDMGSFHIWIARYLYTFRARQVMISNGQQTMGVALPWA 63
Score = 26.1 bits (56), Expect = 4.5
Identities = 7/117 (5%), Positives = 23/117 (19%), Gaps = 10/117 (8%)
Query: 65 PDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
+ + D + + + + R + + +
Sbjct: 19 NSDVTLTVDMGSFHIWIARYLY----------TFRARQVMISNGQQTMGVALPWAIGAWL 68
Query: 125 QSDGTFVGKFGSMGNKAGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVFQSD 181
+ V G N + + +N + + +Q
Sbjct: 69 VNPERKVVSVSGDGGFLQSSMELETAVRLKANVLHLIWVDNGYNMVAIQEEKKYQRL 125
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 26.8 bits (59), Expect = 4.2
Identities = 21/180 (11%), Positives = 45/180 (25%), Gaps = 36/180 (20%)
Query: 119 HRVQVFQSDGTFVGKFGSMGNKAGQ--------------------LEHPHYIAVSNTNR- 157
H + +DG + GK+ + +KA ++ H + + +
Sbjct: 70 HHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKT 129
Query: 158 VIVSDSNNHRVQIFDVNGRVFQSDGTFVGKFGSMGNKAGQLEH------PHYIAVS-NTN 210
V + + +G F D ++
Sbjct: 130 NYVFCNAEFVI-PQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGNLDNTDADYTGK 188
Query: 211 RVIVSDSNNHRVQIFDVNGRVITSFGSEGSEEGQLKFPRGVA-VDDQGYISVGDSGNNRI 269
+ N+ R R + + R A V + ++GDS +
Sbjct: 189 YATSTCYNSERAVDLAGTMRNDRDWVVVFN------VERIAAAVKAGNFKTIGDSKVPVV 242
>d1ovma3 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxylase
{Enterobacter cloacae [TaxId: 550]}
Length = 196
Score = 26.0 bits (56), Expect = 4.6
Identities = 8/38 (21%), Positives = 14/38 (36%), Gaps = 6/38 (15%)
Query: 107 PDNSIVVADSSNHRVQVFQ----SDGTFV--GKFGSMG 138
I++AD +D F+ +GS+G
Sbjct: 19 RPGDIILADQGTSAFGAIDLRLPADVNFIVQPLWGSIG 56
>d1zpda3 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymomonas
mobilis [TaxId: 542]}
Length = 204
Score = 26.4 bits (57), Expect = 4.8
Identities = 8/57 (14%), Positives = 18/57 (31%), Gaps = 9/57 (15%)
Query: 107 PDNSIVVADSSNHRVQV----FQSDGTFV--GKFGSMGNKAGQLEHPHYIAVSNTNR 157
N+ V+A++ + + ++G +G + AV R
Sbjct: 17 TPNTTVIAETGDSWFNAQRMKLPNGARVEYEMQWGHIGWS---VPAAFGYAVGAPER 70
>d2ez9a3 c.36.1.9 (A:366-593) Pyruvate oxidase {Lactobacillus
plantarum [TaxId: 1590]}
Length = 228
Score = 26.0 bits (56), Expect = 5.1
Identities = 8/60 (13%), Positives = 17/60 (28%), Gaps = 1/60 (1%)
Query: 65 PDNSIVVADSSNHRVQVCFPHFDLKTNCVFLAFTWPRGIAVGPDNSIVVADSSNHRVQVF 124
++I D + + H L + + + VG +I + R
Sbjct: 20 EPDAIYSIDVGDINLNAN-RHLKLTPSNRHITSNLFATMGVGIPGAIAAKLNYPERQVFN 78
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.138 0.423
Gapped
Lambda K H
0.267 0.0506 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,173,699
Number of extensions: 53785
Number of successful extensions: 324
Number of sequences better than 10.0: 1
Number of HSP's gapped: 245
Number of HSP's successfully gapped: 97
Length of query: 319
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 234
Effective length of database: 1,240,546
Effective search space: 290287764
Effective search space used: 290287764
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (24.7 bits)