BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy140
(184 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O00178|GTPB1_HUMAN GTP-binding protein 1 OS=Homo sapiens GN=GTPBP1 PE=1 SV=3
Length = 669
Score = 175 bits (443), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 109/172 (63%), Gaps = 10/172 (5%)
Query: 1 MVMVSPALNPVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAECLRTGD 60
MVMVSP LNP A WEFE EILVLHHPTTIS RYQAMVHCGSIRQTA+ILSM +CLRTGD
Sbjct: 477 MVMVSPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGD 536
Query: 61 KAAVHFRFIKHPEYLRAGQRMVFREGRTKAVGNVTKVLPPSGHQGNYSHLSRTKANKMLS 120
KA VHFRFIK PEYL QR+VFREGRTKAVG +TK+L + N S+ + KM S
Sbjct: 537 KATVHFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQTT---NNSPMNSKPQQIKMQS 593
Query: 121 HRAQPNKTWALSPVTEKPEVKTPRDLDRAGQAGAKRGGVEGAEPSETKTRQP 172
+ P + P V P D A GA +P+ + QP
Sbjct: 594 TKKGPLTKRDEGGPSGGPAVGAPPPGDEASSVGA-------GQPAASSNLQP 638
>sp|Q5XGS8|GTPB1_XENLA GTP-binding protein 1 OS=Xenopus laevis GN=gtpbp1 PE=2 SV=1
Length = 654
Score = 174 bits (441), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 80/98 (81%), Positives = 86/98 (87%)
Query: 1 MVMVSPALNPVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAECLRTGD 60
MVMVSP LNP A WEFE EILVLHHPTTIS RYQAMVHCGSIRQTA+IL+MS +CLRTGD
Sbjct: 466 MVMVSPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILTMSRDCLRTGD 525
Query: 61 KAAVHFRFIKHPEYLRAGQRMVFREGRTKAVGNVTKVL 98
KA VHFRFIK PEYL QR+VFREGRTKAVG +TK+L
Sbjct: 526 KAIVHFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLL 563
>sp|D2XV59|GTPB1_RAT GTP-binding protein 1 OS=Rattus norvegicus GN=Gtpbp1 PE=1 SV=1
Length = 669
Score = 174 bits (441), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 80/98 (81%), Positives = 85/98 (86%)
Query: 1 MVMVSPALNPVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAECLRTGD 60
MVMVSP LNP A WEFE EILVLHHPTTIS RYQAMVHCGSIRQTA+ILSM +CLRTGD
Sbjct: 477 MVMVSPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGD 536
Query: 61 KAAVHFRFIKHPEYLRAGQRMVFREGRTKAVGNVTKVL 98
KA VHFRFIK PEYL QR+VFREGRTKAVG +TK+L
Sbjct: 537 KATVHFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLL 574
>sp|Q58DC5|GTPB1_BOVIN GTP-binding protein 1 OS=Bos taurus GN=GTPBP1 PE=2 SV=2
Length = 669
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 80/98 (81%), Positives = 85/98 (86%)
Query: 1 MVMVSPALNPVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAECLRTGD 60
MVMVSP LNP A WEFE EILVLHHPTTIS RYQAMVHCGSIRQTA+ILSM +CLRTGD
Sbjct: 477 MVMVSPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGD 536
Query: 61 KAAVHFRFIKHPEYLRAGQRMVFREGRTKAVGNVTKVL 98
KA VHFRFIK PEYL QR+VFREGRTKAVG +TK+L
Sbjct: 537 KATVHFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLL 574
>sp|Q5R8Q7|GTPB1_PONAB GTP-binding protein 1 (Fragment) OS=Pongo abelii GN=GTPBP1 PE=2
SV=2
Length = 602
Score = 174 bits (440), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/154 (60%), Positives = 103/154 (66%), Gaps = 3/154 (1%)
Query: 1 MVMVSPALNPVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAECLRTGD 60
MVMVSP LNP A WEFE EILVLHHPTTIS RYQAMVHCGSIRQTA+ILSM +CLRTGD
Sbjct: 410 MVMVSPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGD 469
Query: 61 KAAVHFRFIKHPEYLRAGQRMVFREGRTKAVGNVTKVLPPSGHQGNYSHLSRTKANKMLS 120
KA VHFRFIK PEYL QR+VFREGRTKAVG +TK+L + N S+ + KM S
Sbjct: 470 KATVHFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQTT---NNSPMNSKPQQIKMQS 526
Query: 121 HRAQPNKTWALSPVTEKPEVKTPRDLDRAGQAGA 154
+ P + P V P D A GA
Sbjct: 527 TKKGPLTKRDEGGPSGGPAVGAPPPGDEASSLGA 560
>sp|O08582|GTPB1_MOUSE GTP-binding protein 1 OS=Mus musculus GN=Gtpbp1 PE=1 SV=2
Length = 668
Score = 174 bits (440), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 80/98 (81%), Positives = 85/98 (86%)
Query: 1 MVMVSPALNPVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAECLRTGD 60
MVMVSP LNP A WEFE EILVLHHPTTIS RYQAMVHCGSIRQTA+ILSM +CLRTGD
Sbjct: 477 MVMVSPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGD 536
Query: 61 KAAVHFRFIKHPEYLRAGQRMVFREGRTKAVGNVTKVL 98
KA VHFRFIK PEYL QR+VFREGRTKAVG +TK+L
Sbjct: 537 KATVHFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLL 574
>sp|Q17045|AGP1_ASCSU GTP-binding protein AGP-1 OS=Ascaris suum GN=AGP-1 PE=2 SV=1
Length = 591
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 80/104 (76%), Gaps = 2/104 (1%)
Query: 1 MVMVSPALNPVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAECLRTGD 60
MV+VSP L P A +F+ E+ VLHHPTTI+ YQAMVH SIRQTA+I+ M+ E LRTGD
Sbjct: 454 MVLVSPLLKPRASLQFDAEVRVLHHPTTIARNYQAMVHVASIRQTATIIQMTKEVLRTGD 513
Query: 61 KAAVHFRFIKHPEYLRAGQRMVFREGRTKAVGNVTKVLP--PSG 102
+ V FRFI++PEY+R G RMVFREGRTKAVG V KV P P+G
Sbjct: 514 RDLVTFRFIRNPEYIRVGSRMVFREGRTKAVGTVIKVYPHMPAG 557
>sp|Q18905|CGP1_CAEEL GTP-binding protein cgp-1 OS=Caenorhabditis elegans GN=cgp-1 PE=2
SV=2
Length = 613
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 95/148 (64%), Gaps = 8/148 (5%)
Query: 1 MVMVSPALNPVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAECLRTGD 60
MV+V P + PVA FE EILVLHHPTTI YQAM+H GS+RQTA+++SM E LRTGD
Sbjct: 455 MVLVDPKVKPVASMVFEAEILVLHHPTTIKPNYQAMLHIGSVRQTATLVSMGKEVLRTGD 514
Query: 61 KAAVHFRFIKHPEYLRAGQRMVFREGRTKAVGNVTKVLPPSGHQGNYSHLSRTKANKMLS 120
+ V F+FI+ PEY+R G +MVFREGRTKAVG V+ V+P L++ +A +
Sbjct: 515 RDKVQFKFIRQPEYIRPGTKMVFREGRTKAVGTVSSVVPQES-------LAQQRAKQKDG 567
Query: 121 HRAQ-PNKTWALSPVTEKPEVKTPRDLD 147
+ Q K+ P KP+ K + LD
Sbjct: 568 RQKQYGKKSMGPKPPNGKPKEKIEKKLD 595
>sp|Q9BX10|GTPB2_HUMAN GTP-binding protein 2 OS=Homo sapiens GN=GTPBP2 PE=2 SV=1
Length = 602
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 1 MVMVSPALNPVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSA-ECLRTG 59
MVMVSP +NP FE EI++L H TT +Q VH G++RQTA + + A + LRTG
Sbjct: 491 MVMVSPEMNPTICSVFEAEIVLLFHATTFRRGFQVTVHVGNVRQTAVVEKIHAKDKLRTG 550
Query: 60 DKAAVHFRFIKHPEYLRAGQRMVFREGRTKAVGNVTKV 97
+KA V FRF+KHPEYL+ G +++FREG TK +G+VT V
Sbjct: 551 EKAVVRFRFLKHPEYLKVGAKLLFREGVTKGIGHVTDV 588
>sp|Q3UJK4|GTPB2_MOUSE GTP-binding protein 2 OS=Mus musculus GN=Gtpbp2 PE=2 SV=1
Length = 602
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 1 MVMVSPALNPVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSA-ECLRTG 59
MVMVSP +NP FE EI++L H TT +Q VH G++RQTA + + A + LRTG
Sbjct: 491 MVMVSPEMNPTICSVFEAEIVLLFHATTFRRGFQVTVHVGNVRQTAVVEKIHAKDKLRTG 550
Query: 60 DKAAVHFRFIKHPEYLRAGQRMVFREGRTKAVGNVTKV 97
+KA V FRF+KHPEYL+ G +++FREG TK +G+VT V
Sbjct: 551 EKAVVRFRFLKHPEYLKVGAKLLFREGVTKGIGHVTDV 588
>sp|Q5UR72|YR624_MIMIV Putative GTP-binding protein R624 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_R624 PE=3 SV=1
Length = 480
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 14 WEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAECLRTGDKAAVHFRFIKHPE 73
+ F I V +HPTTI + YQ ++HC +IRQ + LR ++ +F + PE
Sbjct: 369 YSFNCRISVFNHPTTIMNGYQTVIHCKTIRQPGRFKLNDNQVLRANSTTSLDIKFTRRPE 428
Query: 74 YLRAGQRMVFREGRTKAVGNVTKVLP 99
++ +FR+GRTK +G + +P
Sbjct: 429 FILPKSIFMFRDGRTKGMGIIEGGIP 454
>sp|A1RXW9|EF1A_THEPD Elongation factor 1-alpha OS=Thermofilum pendens (strain Hrk 5)
GN=tuf PE=3 SV=1
Length = 433
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 20/114 (17%)
Query: 10 PVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIR--------------QTASILSMSAEC 55
P EF G I VL+HPT I++ Y ++H + +T S+ +
Sbjct: 320 PTVAEEFTGRIFVLYHPTAIAAGYTPVLHIHTATVPVTFEELLQKLDPRTGSVAEEKPQY 379
Query: 56 LRTGDKAAVHFR------FIKHPEYLRAGQRMVFREGRTKAVGNVTKVLPPSGH 103
++ GD A V F+ K+ E+ G+ + GRT A G V V G+
Sbjct: 380 IKQGDSAIVRFKPRKPVVVEKYSEFPPLGRFAIRDSGRTIAAGVVIDVKKAEGY 433
>sp|A0RUM4|EF1A_CENSY Elongation factor 1-alpha OS=Cenarchaeum symbiosum (strain A)
GN=tuf PE=3 SV=1
Length = 436
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 2 VMVSPALNPVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAECLRTGDK 61
V+ PA P EF +I+V+HHPT ++ Y ++HC + Q A+I+S +
Sbjct: 315 VLGDPANPPKVAKEFLAQIIVIHHPTALAPGYTPVMHCHT-AQVAAIMSEFVSKINPATG 373
Query: 62 AAVHFRFIKHPEYLRAGQRMVFR 84
A ++P++L+ G + +
Sbjct: 374 AVEE----ENPKFLKVGDSAIIK 392
>sp|Q9YAV0|EF1A_AERPE Elongation factor 1-alpha OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=tuf PE=1
SV=1
Length = 437
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 20/110 (18%)
Query: 10 PVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSA--------------EC 55
P EFE I V+ HP+ I+ Y ++H + ++ I+ + A +
Sbjct: 320 PTVAEEFEARIFVIWHPSAITVGYTPVIHVHTASVSSRIIEIKAKLDPKTGQVVEQNPQF 379
Query: 56 LRTGDKAAVHFRFI------KHPEYLRAGQRMVFREGRTKAVGNVTKVLP 99
L+ GD A V F+ + K E + G+ + RT +G VT V P
Sbjct: 380 LKAGDAAIVRFKPVKPLVVEKFSEIPQLGRFAMRDMNRTVGIGIVTDVKP 429
>sp|A2BN41|EF1A_HYPBU Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM
5456 / JCM 9403) GN=tuf PE=3 SV=1
Length = 440
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 20/110 (18%)
Query: 10 PVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSA--------------EC 55
P EF I V+ HP+ I+ Y ++H + A I + A +
Sbjct: 322 PTVAEEFTARIFVIWHPSAITVGYTPVIHAHTASIAARITEIQAKLDPRTGQVIEKNPQF 381
Query: 56 LRTGDKAAVHFRFI------KHPEYLRAGQRMVFREGRTKAVGNVTKVLP 99
L+ GD A V F+ I K+ E+ + G+ + G+T +G V V P
Sbjct: 382 LKAGDAAIVKFKPIKPMVIEKYSEFPQLGRFAMRDMGKTIGIGIVVDVKP 431
>sp|A5ULM5|EF1A_METS3 Elongation factor 1-alpha OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=tuf PE=3 SV=2
Length = 413
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 20/110 (18%)
Query: 10 PVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSA--------------EC 55
P EF+ +I+VL HP I+ Y + HC + + + L ++A +
Sbjct: 302 PAVAKEFDAQIVVLQHPGVITVGYTPVFHCHTSQVACTFLELTAKLDPATGQVAEENPDF 361
Query: 56 LRTGDKAAVHFR-----FIKHPEYLRAGQRMVFRE-GRTKAVGNVTKVLP 99
L+TG+ A V + I++ + + R R+ G+T A G V P
Sbjct: 362 LKTGNAAFVKVKPTKPMVIENAKKIPQMGRFAIRDMGQTVAAGLCIDVTP 411
>sp|A0B7D6|EF1A_METTP Elongation factor 1-alpha OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=tuf PE=3 SV=1
Length = 424
Score = 38.5 bits (88), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 20/110 (18%)
Query: 10 PVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAEC-------------- 55
P EF +I+VL HP+ IS+ Y + HC + + +I + A+
Sbjct: 314 PTVAKEFTAQIVVLQHPSAISAGYTPVFHCHTAQVACTITEIKAKLDPRTGSVKEQNPAF 373
Query: 56 LRTGDKAAVHFR------FIKHPEYLRAGQRMVFREGRTKAVGNVTKVLP 99
++TGD A + R K E + G+ + G T A G V P
Sbjct: 374 IKTGDAAIISVRPTKPMVIEKVKEIPQLGRFAIRDMGMTIAAGMCQNVTP 423
>sp|Q8R050|ERF3A_MOUSE Eukaryotic peptide chain release factor GTP-binding subunit ERF3A
OS=Mus musculus GN=Gspt1 PE=1 SV=2
Length = 636
Score = 38.1 bits (87), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 24/106 (22%)
Query: 16 FEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAECL---RTGDKAAVHFRFIKHP 72
F+ +I+++ H + I Y A++H + + I ++ CL ++G+K+ RF+K
Sbjct: 530 FDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALI--CLVDKKSGEKSKTRPRFVKQD 587
Query: 73 -------------------EYLRAGQRMVFREGRTKAVGNVTKVLP 99
++ + G+ + EG+T A+G V K++P
Sbjct: 588 QVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVP 633
>sp|Q0W8G2|EF1A_UNCMA Elongation factor 1-alpha OS=Uncultured methanogenic archaeon RC-I
GN=tuf PE=3 SV=1
Length = 426
Score = 37.7 bits (86), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 20/111 (18%)
Query: 9 NPVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAEC------------- 55
P EF+ +++VL HP+ I++ Y + HC + + ++ + A
Sbjct: 315 QPTVAVEFKAQVVVLQHPSAITAGYTPVFHCHTAQVACTLTQILATLDPKTGGVKEQNPP 374
Query: 56 -LRTGDKAAVHFR------FIKHPEYLRAGQRMVFREGRTKAVGNVTKVLP 99
++TGD A V R K E + G+ + G+T A G V + P
Sbjct: 375 FIKTGDAAIVLIRPTRPLVIEKVKEIPQLGRFAIRDMGQTVAAGVVMDITP 425
>sp|P15170|ERF3A_HUMAN Eukaryotic peptide chain release factor GTP-binding subunit ERF3A
OS=Homo sapiens GN=GSPT1 PE=1 SV=1
Length = 499
Score = 37.4 bits (85), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 24/106 (22%)
Query: 16 FEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAECL---RTGDKAAVHFRFIKHP 72
F+ +I+++ H + I Y A++H + + I ++ CL ++G+K+ RF+K
Sbjct: 393 FDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALI--CLVDKKSGEKSKTRPRFVKQD 450
Query: 73 -------------------EYLRAGQRMVFREGRTKAVGNVTKVLP 99
++ + G+ + EG+T A+G V K++P
Sbjct: 451 QVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVP 496
>sp|Q976B1|EF1A_SULTO Elongation factor 1-alpha OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=tuf PE=3 SV=1
Length = 435
Score = 37.4 bits (85), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 22/118 (18%)
Query: 4 VSPALN--PVAVWEFEGEILVLHHPTTISSRYQAMVH-------CGSIRQTASI------ 48
V+ +LN P EF +I+V+ HPT +S Y +VH C T+ I
Sbjct: 312 VAGSLNVPPTVADEFTAQIIVIWHPTAVSVGYTPVVHIHTASVACRITELTSKIDPKTGK 371
Query: 49 -LSMSAECLRTGDKAAVHFRFIKH--PEYLR---AGQRMVFRE-GRTKAVGNVTKVLP 99
+ + + L++GD A V + IK E R A R R+ G+T VG V V P
Sbjct: 372 EVEKNPQFLKSGDSAIVKMKPIKELVVEKFREFPALGRFAMRDMGKTVGVGVVIDVKP 429
>sp|A3CTG3|EF1A_METMJ Elongation factor 1-alpha OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=tuf PE=3 SV=1
Length = 425
Score = 37.4 bits (85), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 20/110 (18%)
Query: 10 PVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAEC-------------- 55
P EF +++VLHHP+ ++ Y + HC + + S + + +
Sbjct: 312 PTVAEEFIAQVVVLHHPSALTVGYTPVFHCHTAQIACSFVELMKKLDPRTGQVKEENPTF 371
Query: 56 LRTGDKAAVHFR------FIKHPEYLRAGQRMVFREGRTKAVGNVTKVLP 99
L+TGD A V R K E + G+ V G T A G + P
Sbjct: 372 LKTGDAAIVKIRPTQPMVIEKVKEIPQLGRFAVRDMGSTIAAGVCMDITP 421
>sp|Q12WT3|EF1A_METBU Elongation factor 1-alpha OS=Methanococcoides burtonii (strain DSM
6242) GN=tuf PE=3 SV=1
Length = 422
Score = 37.0 bits (84), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 3 MVSPALNPVAVW-EFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAECLRTGDK 61
+ PA P +V EF G+I+VL HP+ I+ Y + HC + + ++++++ + D
Sbjct: 303 VCGPADKPPSVADEFTGQIVVLQHPSAITVGYTPVFHCHTAQTACTLMAINKKL----DP 358
Query: 62 AAVHFRFIKHPEYLRAGQRMV 82
+ + ++P Y++AG +
Sbjct: 359 KSGQVKE-ENPTYIKAGDAAI 378
>sp|Q2FRI3|EF1A_METHJ Elongation factor 1-alpha OS=Methanospirillum hungatei (strain JF-1
/ DSM 864) GN=tuf PE=3 SV=1
Length = 425
Score = 37.0 bits (84), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 10/79 (12%)
Query: 9 NPVAVWE-FEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAECL--RTGDKAAVH 65
NP AV E F +I+VL HP+ I+ Y + HC + QTA + + L RTG
Sbjct: 310 NPPAVAEEFTAQIVVLQHPSAITVGYTPVFHCHT-AQTACTFTELVKKLDPRTGQTLE-- 366
Query: 66 FRFIKHPEYLRAGQRMVFR 84
++P +L+AG + +
Sbjct: 367 ----ENPTFLKAGDAAIIK 381
>sp|P41203|EF1A_DESMO Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3
SV=1
Length = 438
Score = 36.6 bits (83), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 20/110 (18%)
Query: 10 PVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAEC-------------- 55
P EF I+V+ HPT I+ Y ++H + I + A+
Sbjct: 322 PTVADEFTARIMVMWHPTAIAVGYTPVIHVHTASVACRITEIIAKIDPRTGKEIEKNPHF 381
Query: 56 LRTGDKAAVHFRFI------KHPEYLRAGQRMVFREGRTKAVGNVTKVLP 99
L+ GD A V F+ I K+ ++ G+ + G+T +G V ++ P
Sbjct: 382 LKQGDIAIVKFKPIKPLVVEKYSDFQGLGRFAMRDMGKTIGIGQVLEIKP 431
>sp|P17197|EF1A_THECE Elongation factor 1-alpha OS=Thermococcus celer GN=tuf PE=3 SV=1
Length = 428
Score = 36.6 bits (83), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 20/102 (19%)
Query: 16 FEGEILVLHHPTTISSRYQAMVHCGSIR--------------QTASILSMSAECLRTGDK 61
F+ +I+VL+HPT I+ Y ++H +++ +T +I+ + + ++TGD
Sbjct: 323 FKAQIIVLNHPTAITVGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDS 382
Query: 62 AAVHFR----FIKHP--EYLRAGQRMVFREGRTKAVGNVTKV 97
A V R + P E + G+ + G+T A G V +
Sbjct: 383 AIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISI 424
>sp|A3DMQ1|EF1A_STAMF Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1
Length = 438
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 20/110 (18%)
Query: 10 PVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSA--------------EC 55
P EF + ++ HPT I+ Y ++H + + I+ + A +
Sbjct: 321 PTVAEEFTARVFIIWHPTAITVGYTPVIHIHTASVASRIVEIKAKLDPRTGKVVEENPQF 380
Query: 56 LRTGDKAAVHFRFI------KHPEYLRAGQRMVFREGRTKAVGNVTKVLP 99
++ GD A V F+ I K+ ++ G+ + G+T +G V V P
Sbjct: 381 IKMGDAAIVRFKPIKPLVVEKYSDFPPLGRFAMRDMGKTIGIGVVVDVKP 430
>sp|Q57770|EF1A_METJA Elongation factor 1-alpha OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=tuf PE=3 SV=1
Length = 428
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 14/72 (19%)
Query: 10 PVAVWEFEGEILVLHHPTTISSRYQAMVH-------CGSIR-------QTASILSMSAEC 55
P EF +I+VL HPT I+ Y + H C I +T ++ + +
Sbjct: 316 PTVAEEFTAQIVVLQHPTAITVGYTPVFHAHTAQVACTFIELLKKLDPRTGQVIEENPQF 375
Query: 56 LRTGDKAAVHFR 67
L+TGD A V +
Sbjct: 376 LKTGDAAIVKIK 387
>sp|A7I656|EF1A_METB6 Elongation factor 1-alpha OS=Methanoregula boonei (strain 6A8)
GN=tuf PE=3 SV=1
Length = 425
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 20/110 (18%)
Query: 10 PVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAEC-------------- 55
P EF +++VL HP+ I+ Y + HC + + + + + +
Sbjct: 312 PTVADEFTAQVVVLQHPSAITVGYTPVFHCHTTQTACTFIELKKKLDPRSGQTKEENPTF 371
Query: 56 LRTGDKAAVHFR-----FIKHPEYLRAGQRMVFRE-GRTKAVGNVTKVLP 99
L+TGD A V + I++ + L R R+ G T A G + P
Sbjct: 372 LKTGDAAIVQIKPTKPMVIENVKELPQLGRFAVRDMGSTIAAGMCIAIQP 421
>sp|B6YVG2|EF1A_THEON Elongation factor 1-alpha OS=Thermococcus onnurineus (strain NA1)
GN=tuf PE=3 SV=1
Length = 428
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 20/102 (19%)
Query: 16 FEGEILVLHHPTTISSRYQAMVHCGSIR--------------QTASILSMSAECLRTGDK 61
F+ +I+VL+HPT I+ Y ++H +++ +T +++ + + ++TGD
Sbjct: 323 FKAQIIVLNHPTAITIGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDS 382
Query: 62 AAVHFR----FIKHP--EYLRAGQRMVFREGRTKAVGNVTKV 97
A V R + P E + G+ + G+T A G V +
Sbjct: 383 AIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISI 424
>sp|Q149F3|ERF3B_MOUSE Eukaryotic peptide chain release factor GTP-binding subunit ERF3B
OS=Mus musculus GN=Gspt2 PE=1 SV=1
Length = 632
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 20/104 (19%)
Query: 16 FEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSM-SAECLRTGDKAAVHFRFIKHP-- 72
F+ +I+++ H + I Y A++H + + I ++ S ++G+K+ RF+K
Sbjct: 526 FDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQV 585
Query: 73 -----------------EYLRAGQRMVFREGRTKAVGNVTKVLP 99
++ + G+ + EG+T A+G V K++P
Sbjct: 586 CIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVP 629
>sp|Q8TYP6|EF1A_METKA Elongation factor 1-alpha OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=tuf PE=3 SV=1
Length = 423
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 20/102 (19%)
Query: 16 FEGEILVLHHPTTISSRYQAMVHCGSIR--------------QTASILSMSAECLRTGDK 61
F +I+VL HP+ I++ Y + HC + + T ++ + + L+TG+
Sbjct: 318 FIAQIVVLQHPSAITAGYTPVFHCHTAQVACKFEELIEKIDPATGEVIEENPDFLKTGEA 377
Query: 62 AAVHFR-----FIKHPEYLRAGQRMVFRE-GRTKAVGNVTKV 97
A V R I+ ++ R R+ G+T A G K+
Sbjct: 378 AKVRIRPTKPMVIEEVSFIPQLGRFAIRDMGQTVAAGMCVKI 419
>sp|Q5R4B3|ERF3B_PONAB Eukaryotic peptide chain release factor GTP-binding subunit ERF3B
OS=Pongo abelii GN=GSPT2 PE=2 SV=1
Length = 628
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 20/104 (19%)
Query: 16 FEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSM-SAECLRTGDKAAVHFRFIKHP-- 72
F+ +I+++ H + I Y A++H + + I ++ S ++G+K+ RF+K
Sbjct: 522 FDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQV 581
Query: 73 -----------------EYLRAGQRMVFREGRTKAVGNVTKVLP 99
++ + G+ + EG+T A+G V K++P
Sbjct: 582 CIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVP 625
>sp|Q8IYD1|ERF3B_HUMAN Eukaryotic peptide chain release factor GTP-binding subunit ERF3B
OS=Homo sapiens GN=GSPT2 PE=1 SV=2
Length = 628
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 20/104 (19%)
Query: 16 FEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSM-SAECLRTGDKAAVHFRFIKHP-- 72
F+ +I+++ H + I Y A++H + + I ++ S ++G+K+ RF+K
Sbjct: 522 FDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQV 581
Query: 73 -----------------EYLRAGQRMVFREGRTKAVGNVTKVLP 99
++ + G+ + EG+T A+G V K++P
Sbjct: 582 CIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVP 625
>sp|Q8U152|EF1A_PYRFU Elongation factor 1-alpha OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=tuf PE=3 SV=1
Length = 428
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 14/69 (20%)
Query: 16 FEGEILVLHHPTTISSRYQAMVHCGSIR--------------QTASILSMSAECLRTGDK 61
F+ +I+VL+HPT I+ Y ++H + + +T +I+ + + ++TGD
Sbjct: 323 FKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQFIKTGDA 382
Query: 62 AAVHFRFIK 70
A V R +K
Sbjct: 383 AIVILRPMK 391
>sp|P35021|EF1A_SULSO Elongation factor 1-alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=tuf PE=1 SV=3
Length = 435
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Query: 10 PVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAECL-----RTGDKAAV 64
P EF I+V+ HPT +++ Y ++H TAS+ +E + RTG +A
Sbjct: 320 PTVADEFTARIIVVWHPTALANGYTPVIHV----HTASVACRVSELVSKLDPRTGQEAE- 374
Query: 65 HFRFIKHPEYLRAGQRMVFR 84
K+P++L+ G + +
Sbjct: 375 -----KNPQFLKQGDVAIVK 389
>sp|P26751|EF1A_PYRWO Elongation factor 1-alpha OS=Pyrococcus woesei GN=tuf PE=3 SV=1
Length = 430
Score = 35.0 bits (79), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 14/69 (20%)
Query: 16 FEGEILVLHHPTTISSRYQAMVHCGSIR--------------QTASILSMSAECLRTGDK 61
F+ +I+VL+HPT I+ Y ++H + + +T +I+ + + ++TGD
Sbjct: 325 FKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQFIKTGDA 384
Query: 62 AAVHFRFIK 70
A V R +K
Sbjct: 385 AIVILRPMK 393
>sp|Q5JFZ4|EF1A_PYRKO Elongation factor 1-alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=tuf PE=3 SV=1
Length = 428
Score = 35.0 bits (79), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 20/102 (19%)
Query: 16 FEGEILVLHHPTTISSRYQAMVHCGSIR--------------QTASILSMSAECLRTGDK 61
F+ +I+VL+HPT I+ Y ++H + + +T +I+ + + ++TGD
Sbjct: 323 FKAQIIVLNHPTAITVGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDS 382
Query: 62 AAVHFR----FIKHP--EYLRAGQRMVFREGRTKAVGNVTKV 97
A V R + P E + G+ + G+T A G V +
Sbjct: 383 AIVILRPTKAMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISI 424
>sp|O29325|EF1A_ARCFU Elongation factor 1-alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=tuf PE=3 SV=1
Length = 423
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 10 PVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAECLRTGDKAAVHFRFI 69
P V +F +++VL HPT I+ Y +VH TA I E + D +
Sbjct: 312 PTVVKDFTAQLVVLQHPTAITVGYTPVVHA----HTAQIACRFVELQKKIDPRTGQVKE- 366
Query: 70 KHPEYLRAGQRMVFREGRTK-AVGNVTKVLPPSG 102
++P++L+ G + + T+ V K +PP G
Sbjct: 367 ENPQFLKTGDAAIVKLEPTRPMVIERVKDIPPMG 400
>sp|O59153|EF1A_PYRHO Elongation factor 1-alpha OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=tuf PE=3 SV=1
Length = 428
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 14/69 (20%)
Query: 16 FEGEILVLHHPTTISSRYQAMVHCGSIR--------------QTASILSMSAECLRTGDK 61
F+ +I+VL+HPT I+ Y ++H + + +T +I+ + + ++TGD
Sbjct: 323 FKAQIIVLNHPTAITVGYSPVLHAHTAQIPVRFEQILAKVDPRTGNIVEENPQFIKTGDS 382
Query: 62 AAVHFRFIK 70
A V R +K
Sbjct: 383 AIVVLRPMK 391
>sp|C5A5P4|EF1A_THEGJ Elongation factor 1-alpha OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=tuf PE=3 SV=1
Length = 428
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 20/102 (19%)
Query: 16 FEGEILVLHHPTTISSRYQAMVHCGSIR--------------QTASILSMSAECLRTGDK 61
F+ +I+VL+HPT I+ Y ++H + + +T +I+ + + ++TGD
Sbjct: 323 FKAQIIVLNHPTAITVGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDS 382
Query: 62 AAVHFR----FIKHP--EYLRAGQRMVFREGRTKAVGNVTKV 97
A V R + P E + G+ + G+T A G V +
Sbjct: 383 AIVILRPTKAMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISI 424
>sp|A8ABM5|EF1A_IGNH4 Elongation factor 1-alpha OS=Ignicoccus hospitalis (strain KIN4/I /
DSM 18386 / JCM 14125) GN=tuf PE=3 SV=1
Length = 442
Score = 34.7 bits (78), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 20/110 (18%)
Query: 10 PVAVWEFEGEILVLHHPTTISSRYQAMVHCGS---------IRQ-----TASILSMSAEC 55
P +F + V+ HP+ I+ Y ++H + I+Q T ++ +
Sbjct: 324 PTVADQFTARVFVIWHPSAIAVGYTPVIHAHTASVASRIIEIKQKIDPRTGKVIEENPSF 383
Query: 56 LRTGDKAAVHFRFI------KHPEYLRAGQRMVFREGRTKAVGNVTKVLP 99
L+ GD A V F+ + K E+ G+ + G+T +G VT V P
Sbjct: 384 LKPGDAAVVVFKPLKPMVIEKFQEFQPLGRFAMRDMGKTVGIGIVTDVKP 433
>sp|Q8TRC4|EF1A_METAC Elongation factor 1-alpha OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=tuf PE=3
SV=1
Length = 422
Score = 34.7 bits (78), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 15 EFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAECL-RTGDKAAVHFRFIKHPE 73
EF G+I+VL HP+ I++ Y + H + + ++S+ + +TG +HP
Sbjct: 317 EFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLISLDKKLDPKTGQVKE------EHPT 370
Query: 74 YLRAGQRMV 82
+++AG +
Sbjct: 371 FIKAGDAAI 379
>sp|A2STF0|EF1A_METLZ Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1
Length = 425
Score = 34.3 bits (77), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 10 PVAVWEFEGEILVLHHPTTISSRYQAMVHCGSIRQTASILSMSAECL--RTGDKAAVHFR 67
P EF +++VL HP+ +S Y + HC + QTA + + + L R+G
Sbjct: 312 PTVAEEFTAQVVVLQHPSVLSVGYTPVFHCHT-SQTACMFTELNKKLDPRSGQVKE---- 366
Query: 68 FIKHPEYLRAGQRMV 82
++P +L+AG +
Sbjct: 367 --ENPAFLKAGDAAI 379
>sp|O69174|ENO_STAAU Enolase OS=Staphylococcus aureus GN=eno PE=1 SV=1
Length = 434
Score = 34.3 bits (77), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 58 TGDKAAVHFRFIKHPEYLRAGQRMVFREGRTKAVGNVTKVLPPSGHQGNYSHLSRTKANK 117
TG+ AV R YL +G TKAV NV +++ P +G +S L + +K
Sbjct: 43 TGEHEAVELRDGDKSRYLG--------KGVTKAVENVNEIIAPEIIEGEFSVLDQVSIDK 94
Query: 118 ML-SHRAQPNK 127
M+ + PNK
Sbjct: 95 MMIALDGTPNK 105
>sp|Q9V0V7|EF1A_PYRAB Elongation factor 1-alpha OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=tuf PE=3 SV=1
Length = 428
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 14/69 (20%)
Query: 16 FEGEILVLHHPTTISSRYQAMVHCGSIR--------------QTASILSMSAECLRTGDK 61
F+ +I+VL+HPT I+ Y ++H + + +T +I + + ++TGD
Sbjct: 323 FKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKIDPRTGNITEENPQFIKTGDS 382
Query: 62 AAVHFRFIK 70
A V R +K
Sbjct: 383 AIVVLRPMK 391
>sp|C6A4R7|EF1A_THESM Elongation factor 1-alpha OS=Thermococcus sibiricus (strain MM 739
/ DSM 12597) GN=tuf PE=3 SV=1
Length = 428
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 20/102 (19%)
Query: 16 FEGEILVLHHPTTISSRYQAMVHCGSIR--------------QTASILSMSAECLRTGDK 61
F+ +I+VL+HPT I+ Y ++H + + +T +++ + + ++TGD
Sbjct: 323 FKAQIIVLNHPTAITIGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDS 382
Query: 62 AAVHFR----FIKHP--EYLRAGQRMVFREGRTKAVGNVTKV 97
A V R + P E + G+ + G+T A G V +
Sbjct: 383 AIVVLRPTKPMVIEPVKELPQLGRFAIRDMGQTVAAGMVISI 424
>sp|P64079|ENO_STAAW Enolase OS=Staphylococcus aureus (strain MW2) GN=eno PE=3 SV=1
Length = 434
Score = 33.9 bits (76), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 58 TGDKAAVHFRFIKHPEYLRAGQRMVFREGRTKAVGNVTKVLPPSGHQGNYSHLSRTKANK 117
TG+ AV R YL +G TKAV NV +++ P +G +S L + +K
Sbjct: 43 TGEHEAVELRDGDKSRYLG--------KGVTKAVENVNEIIAPEIIEGEFSVLDQVSIDK 94
Query: 118 ML-SHRAQPNK 127
M+ + PNK
Sbjct: 95 MMIALDGTPNK 105
>sp|A8Z1A4|ENO_STAAT Enolase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=eno
PE=3 SV=1
Length = 434
Score = 33.9 bits (76), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 58 TGDKAAVHFRFIKHPEYLRAGQRMVFREGRTKAVGNVTKVLPPSGHQGNYSHLSRTKANK 117
TG+ AV R YL +G TKAV NV +++ P +G +S L + +K
Sbjct: 43 TGEHEAVELRDGDKSRYLG--------KGVTKAVENVNEIIAPEIIEGEFSVLDQVSIDK 94
Query: 118 ML-SHRAQPNK 127
M+ + PNK
Sbjct: 95 MMIALDGTPNK 105
>sp|Q6GB54|ENO_STAAS Enolase OS=Staphylococcus aureus (strain MSSA476) GN=eno PE=3 SV=1
Length = 434
Score = 33.9 bits (76), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 58 TGDKAAVHFRFIKHPEYLRAGQRMVFREGRTKAVGNVTKVLPPSGHQGNYSHLSRTKANK 117
TG+ AV R YL +G TKAV NV +++ P +G +S L + +K
Sbjct: 43 TGEHEAVELRDGDKSRYLG--------KGVTKAVENVNEIIAPEIIEGEFSVLDQVSIDK 94
Query: 118 ML-SHRAQPNK 127
M+ + PNK
Sbjct: 95 MMIALDGTPNK 105
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,165,938
Number of Sequences: 539616
Number of extensions: 2612088
Number of successful extensions: 6692
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 6653
Number of HSP's gapped (non-prelim): 97
length of query: 184
length of database: 191,569,459
effective HSP length: 110
effective length of query: 74
effective length of database: 132,211,699
effective search space: 9783665726
effective search space used: 9783665726
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)