Your job contains 1 sequence.
>psy14002
MVDVYGLAGIIIFYTLVLAIGVWAGTKQKNHGEEEVMLAGRNVGLFVGVLTLTATWVGGG
YINATAEALFTTGLVWCQVPLGYSLALVVGALLFVKPMREASYVTMLDPFQQAYGNRIGG
LLFLPALCGDVFWIASVLSSLGSVVDTLCLSFPFAISNAQPYLKEPNMTIFSKIDWLGTV
ETKDYGLWIEGMLLLAFGGIPWQCLSFPFAISNAQPYLKEPNMTIFSKVDWLGTVETKDY
GLWIEGMLLLAFGGIPWQSYFQRVLSLRSTKAAYHLSTLSALLCFSMAIPAGAFGIIARM
VDWSAIPTYGKNFTAAESNSVLPLVLKELTPNWVAFFGLGAVTAAVMSSADAGILSSSSM
FTRNIYKLSFRPKLTPNWVAFFGLGAVTAAVMSSADAGILSSSSMFTRNIYKLSFRPKVD
LTPDEHPHYQVDLTGTAEKVQMSGLPDEHAHTIR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14002
(454 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0038641 - symbol:CG7708 species:7227 "Drosophila m... 534 2.7e-86 2
UNIPROTKB|Q9GZV3 - symbol:SLC5A7 "High affinity choline t... 779 2.1e-77 1
ZFIN|ZDB-GENE-090313-273 - symbol:si:dkey-24h22.4 "si:dke... 777 3.4e-77 1
UNIPROTKB|F1P4Q0 - symbol:SLC5A7 "Uncharacterized protein... 767 3.9e-76 1
RGD|69270 - symbol:Slc5a7 "solute carrier family 5 (choli... 767 3.9e-76 1
UNIPROTKB|Q8UWF0 - symbol:CHT1 "High-affinity choline tra... 766 5.0e-76 1
MGI|MGI:1927126 - symbol:Slc5a7 "solute carrier family 5 ... 766 5.0e-76 1
UNIPROTKB|Q2KI26 - symbol:SLC5A7 "Solute carrier family 5... 764 8.1e-76 1
UNIPROTKB|F1SU25 - symbol:SLC5A7 "Uncharacterized protein... 760 2.1e-75 1
UNIPROTKB|E2RAJ0 - symbol:SLC5A7 "Uncharacterized protein... 757 4.5e-75 1
WB|WBGene00000501 - symbol:cho-1 species:6239 "Caenorhabd... 749 3.1e-74 1
UNIPROTKB|O02228 - symbol:cho-1 "High-affinity choline tr... 749 3.1e-74 1
UNIPROTKB|E1C8V1 - symbol:LOC428094 "Uncharacterized prot... 633 6.2e-62 1
UNIPROTKB|F5H382 - symbol:SLC5A7 "High affinity choline t... 495 2.6e-47 1
UNIPROTKB|E1BZW4 - symbol:SLC5A7 "Uncharacterized protein... 171 1.7e-11 1
TIGR_CMR|BA_3607 - symbol:BA_3607 "sodium/pantothenate sy... 166 2.9e-09 1
TIGR_CMR|CPS_3347 - symbol:CPS_3347 "transporter, solute:... 133 1.4e-05 1
TIGR_CMR|CJE_1675 - symbol:CJE_1675 "sodium/proline perme... 133 1.4e-05 1
ASPGD|ASPL0000063389 - symbol:AN7557 species:162425 "Emer... 94 4.5e-05 2
UNIPROTKB|Q6R4Q5 - symbol:SLC5A10 "Sodium/glucose cotrans... 110 5.1e-05 2
ZFIN|ZDB-GENE-040426-1524 - symbol:slc5a1 "solute carrier... 99 0.00042 2
UNIPROTKB|A0PJK1 - symbol:SLC5A10 "Sodium/glucose cotrans... 100 0.00077 2
>FB|FBgn0038641 [details] [associations]
symbol:CG7708 species:7227 "Drosophila melanogaster"
[GO:0005298 "proline:sodium symporter activity" evidence=ISS]
[GO:0008292 "acetylcholine biosynthetic process" evidence=ISS]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0015220
"choline transmembrane transporter activity" evidence=ISS]
[GO:0015171 "amino acid transmembrane transporter activity"
evidence=ISS] [GO:0003333 "amino acid transmembrane transport"
evidence=ISS] InterPro:IPR001734 Pfam:PF00474 PROSITE:PS00456
PROSITE:PS00457 PROSITE:PS50283 EMBL:AE014297 GO:GO:0016021
GO:GO:0015293 GO:GO:0015171 GO:GO:0006814 PANTHER:PTHR11819
GO:GO:0008292 GO:GO:0015220 eggNOG:COG0591
GeneTree:ENSGT00690000101915 KO:K14387 OMA:DINIKMS EMBL:AY047521
RefSeq:NP_650743.1 RefSeq:NP_732369.1 UniGene:Dm.4666
ProteinModelPortal:Q9VE46 PaxDb:Q9VE46 EnsemblMetazoa:FBtr0083668
EnsemblMetazoa:FBtr0083669 GeneID:42245 KEGG:dme:Dmel_CG7708
UCSC:CG7708-RA FlyBase:FBgn0038641 InParanoid:Q9VE46
OrthoDB:EOG4NVX1H PhylomeDB:Q9VE46 GenomeRNAi:42245 NextBio:827862
Bgee:Q9VE46 GermOnline:CG7708 Uniprot:Q9VE46
Length = 614
Score = 534 (193.0 bits), Expect = 2.7e-86, Sum P(2) = 2.7e-86
Identities = 105/215 (48%), Positives = 146/215 (67%)
Query: 1 MVDVYGLAGIIIFYTLVLAIGVWAGTKQK--NHGEEEVMLAGRNVGLFVGVLTLTATWVG 58
M+++ G+ I++FY L+L +G+WAG K++ N EEEVMLAGR++GLFVG+ T+TATWVG
Sbjct: 1 MINIAGVVSIVLFYLLILVVGIWAGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVG 60
Query: 59 GGYINATAEALFTTGLVWCQVPLGYSLALVVGALLFVKPMREASYVTMLDPFQQAYGNRI 118
GGYIN TAEA++T+GLVWCQ P GY+L+LV G + F PMR+ Y+TMLDP Q ++G R+
Sbjct: 61 GGYINGTAEAIYTSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSFGERM 120
Query: 119 GGLLFLPALCGDVFWIASVLSSLGSVVDTLCLSFPFAISNAQPYLKEPNMTIFSKIDWLG 178
GGLLFLPALCG+VFW A +L++LG+ LS + + + + IF + G
Sbjct: 121 GGLLFLPALCGEVFWAAGILAALGAT-----LSVIIDMDHRTSVILSSCIAIFYTL--FG 173
Query: 179 TVETKDYGLWIEGMLLLAFGGIPWQCLSFPFAISN 213
+ + Y I+ L F G+ W C+ PFA SN
Sbjct: 174 GLYSVAYTDVIQ--LFCIFIGL-WMCI--PFAWSN 203
Score = 348 (127.6 bits), Expect = 2.7e-86, Sum P(2) = 2.7e-86
Identities = 90/230 (39%), Positives = 121/230 (52%)
Query: 193 LLLAFGGIPWQCLSFPFAISNAQPYLKEPNMTIFSKVDWLGTVETKDYGLWIEGMLLLAF 252
L F G+ W C+ PFA SN + +VDW+G VE K + L+I+ LLL F
Sbjct: 186 LFCIFIGL-WMCI--PFAWSN-----EHVGSLSDLEVDWIGHVEPKKHWLYIDYGLLLVF 237
Query: 253 GGIPWQSYFQRVLSLRSTKAAYHLSTLSALLCFSMAIPAGAFGIIARMVDWSAIPTYGKN 312
GGIPWQ YFQRVLS ++ A LS ++A C MAIP G IA+ W+ G
Sbjct: 238 GGIPWQVYFQRVLSSKTAGRAQLLSYVAAAGCILMAIPPVLIGAIAKATPWNETDYKGPY 297
Query: 313 -FTAAESNSVLPLVLKELTPNWVAFFGLGAVTAAVMXXXXXXXXXXXXMFTRNIYKLSFR 371
T E++ +LP+VL+ LTP++V+FFGLGAV+AAVM MF RN+YKL FR
Sbjct: 298 PLTVDETSMILPMVLQYLTPDFVSFFGLGAVSAAVMSSADSSVLSAASMFARNVYKLIFR 357
Query: 372 PKLTPN---WV---AFFGLGAVTAAVMXXXXXXXXXXXXMFTRNIYKLSF 415
K + WV A +G + A +M M + +Y + F
Sbjct: 358 QKASEMEIIWVMRVAIIVVG-ILATIMALTIPSIYGLWSMCSDLVYVILF 406
Score = 128 (50.1 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 25/45 (55%), Positives = 30/45 (66%)
Query: 374 LTPNWVAFFGLGAVTAAVMXXXXXXXXXXXXMFTRNIYKLSFRPK 418
LTP++V+FFGLGAV+AAVM MF RN+YKL FR K
Sbjct: 315 LTPDFVSFFGLGAVSAAVMSSADSSVLSAASMFARNVYKLIFRQK 359
Score = 102 (41.0 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 173 KIDWLGTVETKDYGLWIEGMLLLAFGGIPWQ 203
++DW+G VE K + L+I+ LLL FGGIPWQ
Sbjct: 213 EVDWIGHVEPKKHWLYIDYGLLLVFGGIPWQ 243
>UNIPROTKB|Q9GZV3 [details] [associations]
symbol:SLC5A7 "High affinity choline transporter 1"
species:9606 "Homo sapiens" [GO:0007271 "synaptic transmission,
cholinergic" evidence=IEA] [GO:0007274 "neuromuscular synaptic
transmission" evidence=IEA] [GO:0033265 "choline binding"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0015220 "choline transmembrane transporter activity"
evidence=IMP] [GO:0008292 "acetylcholine biosynthetic process"
evidence=IMP] [GO:0016021 "integral to membrane" evidence=IDA]
[GO:0005307 "choline:sodium symporter activity" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA;TAS] [GO:0007268
"synaptic transmission" evidence=TAS] [GO:0007269 "neurotransmitter
secretion" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001734 Pfam:PF00474 PROSITE:PS00456 PROSITE:PS00457
PROSITE:PS50283 GO:GO:0016021 GO:GO:0005886 GO:GO:0043025
GO:GO:0007274 GO:GO:0007271 DrugBank:DB00122 GO:GO:0033265
PANTHER:PTHR11819 GO:GO:0007269 GO:GO:0008292 Reactome:REACT_20679
eggNOG:COG0591 EMBL:AC009963 HOGENOM:HOG000016386 KO:K14387
EMBL:AF276871 EMBL:AB043997 EMBL:AJ401466 EMBL:AJ308378
EMBL:AJ308379 EMBL:AJ308380 EMBL:AJ308381 EMBL:AJ308382
EMBL:AJ308383 EMBL:AJ308384 EMBL:BC111525 IPI:IPI00029180
PIR:JC7502 RefSeq:NP_068587.1 UniGene:Hs.287758
ProteinModelPortal:Q9GZV3 STRING:Q9GZV3 PhosphoSite:Q9GZV3
DMDM:56404957 PRIDE:Q9GZV3 Ensembl:ENST00000264047
Ensembl:ENST00000409059 GeneID:60482 KEGG:hsa:60482 UCSC:uc002tdv.3
CTD:60482 GeneCards:GC02P108602 HGNC:HGNC:14025 HPA:HPA046105
MIM:608761 neXtProt:NX_Q9GZV3 PharmGKB:PA37838 HOVERGEN:HBG054160
InParanoid:Q9GZV3 OMA:HAKYQKP OrthoDB:EOG4PVNZB PhylomeDB:Q9GZV3
BindingDB:Q9GZV3 ChEMBL:CHEMBL4507 GenomeRNAi:60482 NextBio:65355
ArrayExpress:Q9GZV3 Bgee:Q9GZV3 CleanEx:HS_SLC5A7
Genevestigator:Q9GZV3 GermOnline:ENSG00000115665 GO:GO:0005307
Uniprot:Q9GZV3
Length = 580
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 177/409 (43%), Positives = 242/409 (59%)
Query: 4 VYGLAGIIIFYTLVLAIGVWAGTKQKNHGEEE-----VMLAGRNVGLFVGVLTLTATWVG 58
V GL II+FY L+L +G+WA + KN G E +++ GR++GL VG T+TATWVG
Sbjct: 5 VEGLIAIIVFYLLILLVGIWAAWRTKNSGSAEERSEAIIVGGRDIGLLVGGFTMTATWVG 64
Query: 59 GGYINATAEALFTTG--LVWCQVPLGYSLALVVGALLFVKPMREASYVTMLDPFQQAYGN 116
GGYIN TAEA++ G L W Q P+GYSL+L++G L F KPMR YVTMLDPFQQ YG
Sbjct: 65 GGYINGTAEAVYVPGYGLAWAQAPIGYSLSLILGGLFFAKPMRSKGYVTMLDPFQQIYGK 124
Query: 117 RIGGLLFLPALCGDVFWIASVLSSLGSVVDTLCLSFPFAISNAQPYLKEPNMTIFSKIDW 176
R+GGLLF+PAL G++FW A++ S+LG+ + + + IS + T+++ +
Sbjct: 125 RMGGLLFIPALMGEMFWAAAIFSALGATISVI-IDVDMHIS---VIISALIATLYTLVGG 180
Query: 177 LGTVETKDYGLWIEGMLLLAFGGIPWQCLSFPFAISNAQPYLKEPNMT-IFSKVD--WLG 233
L +V D ++ L F G+ W +S PFA+S+ P + + T + +K WLG
Sbjct: 181 LYSVAYTDV---VQ--LFCIFVGL-W--ISVPFALSH--PAVADIGFTAVHAKYQKPWLG 230
Query: 234 TVETKDYGLWIEGMLLLAFGGIPWQSYFQRVLSLRSTKAAYHLSTLSALLCFSMAIPAGA 293
TV++ + W++ LLL GGIPWQ+YFQRVLS S A LS L+A C MAIPA
Sbjct: 231 TVDSSEVYSWLDSFLLLMLGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCLVMAIPAIL 290
Query: 294 FGIIARMVDWSAIPTYG--KNFTAAESNSVLPLVLKELTPNWVAFFGLGAVTAAVMXXXX 351
G I DW+ YG T E++ +LP+VL+ L P +++FFGLGAV+AAVM
Sbjct: 291 IGAIGASTDWNQT-AYGLPDPKTTEEADMILPIVLQYLCPVYISFFGLGAVSAAVMSSAD 349
Query: 352 XXXXXXXXMFTRNIYKLSFRPKLTPN---WV----AF-FGLGAVTAAVM 392
MF RNIY+LSFR + WV F FG A A++
Sbjct: 350 SSILSASSMFARNIYQLSFRQNASDKEIVWVMRITVFVFGASATAMALL 398
>ZFIN|ZDB-GENE-090313-273 [details] [associations]
symbol:si:dkey-24h22.4 "si:dkey-24h22.4"
species:7955 "Danio rerio" [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005215
"transporter activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001734 Pfam:PF00474 PROSITE:PS50283
ZFIN:ZDB-GENE-090313-273 GO:GO:0016021 GO:GO:0055085 GO:GO:0005215
PANTHER:PTHR11819 EMBL:BX901972 GeneTree:ENSGT00690000101915
IPI:IPI00900612 Ensembl:ENSDART00000114975 Bgee:F1Q620
Uniprot:F1Q620
Length = 595
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 176/412 (42%), Positives = 239/412 (58%)
Query: 2 VDVYGLAGIIIFYTLVLAIGVWAGTKQKNHG-------EEEVMLAGRNVGLFVGVLTLTA 54
+ V GL I+IFY L+L +G+WA K KN G E +M+ GR++GLFVG T+TA
Sbjct: 3 IHVEGLVAIVIFYLLILLVGIWAAWKNKNSGVMEGTDRSETIMVGGRDIGLFVGAFTMTA 62
Query: 55 TWVGGGYINATAEALFTTG--LVWCQVPLGYSLALVVGALLFVKPMREASYVTMLDPFQQ 112
TWVGGGYIN TAE ++ G L W Q P GY+L+LV+G L F KPMR YVTMLDPFQQ
Sbjct: 63 TWVGGGYINGTAEYVYLPGFGLAWAQAPFGYALSLVLGGLFFAKPMRSRGYVTMLDPFQQ 122
Query: 113 AYGNRIGGLLFLPALCGDVFWIASVLSSLGSVVDTLCLSFPFAISNAQPYLKEPNMTIFS 172
YG R+GGLLF+PAL G++FW A++LS+LGS ++ + +S L + IF
Sbjct: 123 LYGKRMGGLLFIPALMGEMFWSAAILSALGSATLSVIIDIDINMSVVISAL----IAIFY 178
Query: 173 KIDWLGTVETKDYGLWIEGMLLLAFGGIPWQCLSFPFAISNAQPYLKEPNMTIFSKVD-- 230
+ +G + + Y ++ L F G+ W +S PFA+SN P + + +T ++
Sbjct: 179 TL--VGGLYSVAYTDVVQ--LFCIFLGL-W--VSVPFALSN--PAVSDIGVTAVKQLHAN 229
Query: 231 ---WLGTVETKDYGLWIEGMLLLAFGGIPWQSYFQRVLSLRSTKAAYHLSTLSALLCFSM 287
WLG +E+ D +W + LL GGIPWQ YFQRVLS S A LS L+A C M
Sbjct: 230 QTAWLGKIESSDKWMWADNFCLLMLGGIPWQVYFQRVLSASSATYAQVLSFLAAFGCIIM 289
Query: 288 AIPAGAFGIIARMVDWSAIPTYGK--NFTAAESNSVLPLVLKELTPNWVAFFGLGAVTAA 345
AIP+ G I DW+ +YG +S+ +LP+VL+ L P +++FFGLGAV+AA
Sbjct: 290 AIPSVLIGAIGASTDWNQT-SYGPIPPMQKDQSDMILPIVLQHLCPAYISFFGLGAVSAA 348
Query: 346 VMXXXXXXXXXXXXMFTRNIYKLSFRPKLTPN---WV---AFFGLGAVTAAV 391
VM MF RNIY+L+FR + WV F GA+ A+
Sbjct: 349 VMSSADSSILSASSMFARNIYQLAFRQSASDREIVWVMRITIFVFGALATAM 400
>UNIPROTKB|F1P4Q0 [details] [associations]
symbol:SLC5A7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005307 "choline:sodium symporter activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007271 "synaptic
transmission, cholinergic" evidence=IEA] [GO:0007274 "neuromuscular
synaptic transmission" evidence=IEA] [GO:0008292 "acetylcholine
biosynthetic process" evidence=IEA] [GO:0033265 "choline binding"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
InterPro:IPR001734 Pfam:PF00474 PROSITE:PS50283 GO:GO:0016021
GO:GO:0005886 GO:GO:0043025 GO:GO:0033265 PANTHER:PTHR11819
GeneTree:ENSGT00690000101915 KO:K14387 CTD:60482 OMA:HAKYQKP
GO:GO:0005307 EMBL:AADN02017878 IPI:IPI00587773
RefSeq:NP_001001763.1 UniGene:Gga.22 Ensembl:ENSGALT00000027127
GeneID:414870 KEGG:gga:414870 NextBio:20818750 Uniprot:F1P4Q0
Length = 578
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 176/409 (43%), Positives = 238/409 (58%)
Query: 4 VYGLAGIIIFYTLVLAIGVWAGTKQKN---HGE--EEVMLAGRNVGLFVGVLTLTATWVG 58
V GL I +FY +LA+G+WA K KN G+ E +++ GR++GL VG T+TATWVG
Sbjct: 5 VEGLVAIAVFYLAILAVGIWAAWKTKNTSSDGDRSEAIIVGGRDIGLLVGGFTMTATWVG 64
Query: 59 GGYINATAEALFTTG--LVWCQVPLGYSLALVVGALLFVKPMREASYVTMLDPFQQAYGN 116
GGYIN TAEA++ G L W Q P+GYSL+LV+G L F KPMR YVTMLDPFQQ YG
Sbjct: 65 GGYINGTAEAVYVPGYGLAWAQAPIGYSLSLVLGGLFFAKPMRSKGYVTMLDPFQQLYGK 124
Query: 117 RIGGLLFLPALCGDVFWIASVLSSLGSVVDTLCLSFPFAISNAQPYLKEPNMTIFSKIDW 176
R+GGLLF+PAL G++FW A++ S+LG+ + + + N + T+++ +
Sbjct: 125 RMGGLLFIPALMGEMFWAAAIFSALGATISVI---IDINV-NLSVIISALIATLYTLVGG 180
Query: 177 LGTVETKDYGLWIEGMLLLAFGGIPWQCLSFPFAISNAQPYLKEPNMTIFSKVD---WLG 233
L +V D ++ L F G+ W +S PFA+SN P + + T +V WLG
Sbjct: 181 LYSVAYTDV---VQ--LFCIFLGL-W--ISVPFALSN--PAVTDIGFTAVHEVHQAPWLG 230
Query: 234 TVETKDYGLWIEGMLLLAFGGIPWQSYFQRVLSLRSTKAAYHLSTLSALLCFSMAIPAGA 293
T+ + + W++ LLL FGGIPWQ+YFQRVLS S A LS L+A C MAIPA
Sbjct: 231 TIGSLNIYTWLDNFLLLTFGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCIVMAIPAVL 290
Query: 294 FGIIARMVDWSAIPTYGKNFTAA--ESNSVLPLVLKELTPNWVAFFGLGAVTAAVMXXXX 351
G I W+ YG A E++ +LP+VL+ L P +++FFGLGAV+AAVM
Sbjct: 291 IGAIGASTAWNQTE-YGVPDPIANKEADMILPIVLQYLCPVYISFFGLGAVSAAVMSSAD 349
Query: 352 XXXXXXXXMFTRNIYKLSFRPKLTPN---WVA-----FFGLGAVTAAVM 392
MF RNIY+LSFR + WV FG A A++
Sbjct: 350 SSILSASSMFARNIYQLSFRQNASDREIVWVMRITVFLFGASATAMALL 398
>RGD|69270 [details] [associations]
symbol:Slc5a7 "solute carrier family 5 (choline transporter),
member 7" species:10116 "Rattus norvegicus" [GO:0005307
"choline:sodium symporter activity" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] [GO:0006814 "sodium ion
transport" evidence=IEA] [GO:0007271 "synaptic transmission,
cholinergic" evidence=IEA;ISO] [GO:0007274 "neuromuscular synaptic
transmission" evidence=IEA;ISO] [GO:0008292 "acetylcholine
biosynthetic process" evidence=IEA;ISO;IMP] [GO:0015220 "choline
transmembrane transporter activity" evidence=ISO;IMP] [GO:0015293
"symporter activity" evidence=IEA] [GO:0015871 "choline transport"
evidence=ISO;IMP] [GO:0016021 "integral to membrane"
evidence=IEA;ISO;NAS] [GO:0033265 "choline binding"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IEA;ISO]
[GO:0055085 "transmembrane transport" evidence=ISO]
InterPro:IPR001734 Pfam:PF00474 PROSITE:PS00456 PROSITE:PS00457
PROSITE:PS50283 RGD:69270 GO:GO:0016021 GO:GO:0005886 GO:GO:0043025
GO:GO:0007274 GO:GO:0007271 GO:GO:0033265 PANTHER:PTHR11819
GO:GO:0008292 GO:GO:0015220 eggNOG:COG0591 HOGENOM:HOG000016386
KO:K14387 CTD:60482 HOVERGEN:HBG054160 OrthoDB:EOG4PVNZB
GO:GO:0005307 EMBL:AB030947 IPI:IPI00204572 RefSeq:NP_445973.1
UniGene:Rn.44872 STRING:Q9JMD7 TCDB:2.A.21.8.1 GeneID:85426
KEGG:rno:85426 UCSC:RGD:69270 InParanoid:Q9JMD7 BindingDB:Q9JMD7
ChEMBL:CHEMBL5797 NextBio:617526 Genevestigator:Q9JMD7
GermOnline:ENSRNOG00000010597 Uniprot:Q9JMD7
Length = 580
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 176/409 (43%), Positives = 240/409 (58%)
Query: 4 VYGLAGIIIFYTLVLAIGVWAGTKQKNHGEEE-----VMLAGRNVGLFVGVLTLTATWVG 58
V GL II+FY L+ +G+WA K KN G E +++ GR++GL VG T+TATWVG
Sbjct: 5 VEGLVAIILFYLLIFLVGIWAAWKTKNSGNAEERSEAIIVGGRDIGLLVGGFTMTATWVG 64
Query: 59 GGYINATAEALFTTG--LVWCQVPLGYSLALVVGALLFVKPMREASYVTMLDPFQQAYGN 116
GGYIN TAEA++ G L W Q P+GYSL+L++G L F KPMR YVTMLDPFQQ YG
Sbjct: 65 GGYINGTAEAVYGPGCGLAWAQAPIGYSLSLILGGLFFAKPMRSKGYVTMLDPFQQIYGK 124
Query: 117 RIGGLLFLPALCGDVFWIASVLSSLGSVVDTLCLSFPFAISNAQPYLKEPNMTIFSKIDW 176
R+GGLLF+PAL G++FW A++ S+LG+ + + + IS L +++ +
Sbjct: 125 RMGGLLFIPALMGEMFWAAAIFSALGATISVI-IDVDVNISVIVSALIA---ILYTLVGG 180
Query: 177 LGTVETKDYGLWIEGMLLLAFGGIPWQCLSFPFAISNAQPYLKEPNMT-IFSKVD--WLG 233
L +V D ++ L F G+ W +S PFA+S+ P + + T + +K WLG
Sbjct: 181 LYSVAYTDV---VQ--LFCIFIGL-W--ISVPFALSH--PAVTDIGFTAVHAKYQSPWLG 230
Query: 234 TVETKDYGLWIEGMLLLAFGGIPWQSYFQRVLSLRSTKAAYHLSTLSALLCFSMAIPAGA 293
T+E+ + W++ LLL GGIPWQ+YFQRVLS S A LS L+A C MA+PA
Sbjct: 231 TIESVEVYTWLDNFLLLMLGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCLVMALPAIC 290
Query: 294 FGIIARMVDWSAIPTYG--KNFTAAESNSVLPLVLKELTPNWVAFFGLGAVTAAVMXXXX 351
G I DW+ YG T E++ +LP+VL+ L P +++FFGLGAV+AAVM
Sbjct: 291 IGAIGASTDWNQT-AYGFPDPKTKEEADMILPIVLQYLCPVYISFFGLGAVSAAVMSSAD 349
Query: 352 XXXXXXXXMFTRNIYKLSFRPKLTPN---WV----AF-FGLGAVTAAVM 392
MF RNIY+LSFR + WV F FG A A++
Sbjct: 350 SSILSASSMFARNIYQLSFRQNASDKEIVWVMRITVFVFGASATAMALL 398
>UNIPROTKB|Q8UWF0 [details] [associations]
symbol:CHT1 "High-affinity choline transporter 1"
species:7788 "Torpedo marmorata" [GO:0008292 "acetylcholine
biosynthetic process" evidence=IMP] [GO:0015220 "choline
transmembrane transporter activity" evidence=IMP] [GO:0015871
"choline transport" evidence=IMP] [GO:0016021 "integral to
membrane" evidence=NAS] InterPro:IPR001734 Pfam:PF00474
PROSITE:PS00456 PROSITE:PS00457 PROSITE:PS50283 GO:GO:0016021
GO:GO:0015293 GO:GO:0006814 PANTHER:PTHR11819 GO:GO:0008292
GO:GO:0015220 HOVERGEN:HBG054160 EMBL:AJ420808 Uniprot:Q8UWF0
Length = 584
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 176/415 (42%), Positives = 241/415 (58%)
Query: 2 VDVYGLAGIIIFYTLVLAIGVWAGTKQKN---HG----EEEVMLAGRNVGLFVGVLTLTA 54
V + G+ I++FY L+L +G+WA K KN G E +M+ GR++GL VG T+TA
Sbjct: 3 VHIDGIVAIVLFYLLILFVGLWAAWKSKNTSMEGAMDRSEAIMIGGRDIGLLVGGFTMTA 62
Query: 55 TWVGGGYINATAEALFTTG--LVWCQVPLGYSLALVVGALLFVKPMREASYVTMLDPFQQ 112
TWVGGGYIN TAEA++ G L W Q P GY+L+LV+G L F KPMR YVTMLDPFQQ
Sbjct: 63 TWVGGGYINGTAEAVYVPGYGLAWAQAPFGYALSLVIGGLFFAKPMRSRGYVTMLDPFQQ 122
Query: 113 AYGNRIGGLLFLPALCGDVFWIASVLSSLGSVVDTLCLSFPFAISNAQPYLKEPNMTIFS 172
YG R+GGLLF+PAL G++FW A++LS+LG+ TL + I N + +++
Sbjct: 123 MYGKRMGGLLFIPALLGEIFWSAAILSALGA---TLSVIVDINI-NVSVVVSAVIAVLYT 178
Query: 173 KIDWLGTVETKDYGLWIEGMLLLAFGGIPWQCLSFPFAISN--AQPYLKEPNMTIFSKVD 230
+ L +V D ++ L F G+ W +S PFA+ N + N ++ +
Sbjct: 179 LVGGLYSVAYTDV---VQ--LFCIFLGL-W--ISIPFALLNPAVTDIIVTANQEVYQE-P 229
Query: 231 WLGTVETKDYGLWIEGMLLLAFGGIPWQSYFQRVLSLRSTKAAYHLSTLSALLCFSMAIP 290
W+G +++KD +WI+ LLL GGIPWQ YFQRVLS S A LS L+A C MAIP
Sbjct: 230 WVGNIQSKDSLIWIDNFLLLMLGGIPWQVYFQRVLSASSATYAQVLSFLAAFGCVLMAIP 289
Query: 291 AGAFGIIARMVDWS----AIP-TYGKNFTAAESNSVLPLVLKELTPNWVAFFGLGAVTAA 345
+ G I DW+ +P GKN E++ +LP+VL+ L P +++FFGLGAV+AA
Sbjct: 290 SVLIGAIGTSTDWNQTSYGLPGPIGKN----ETDMILPIVLQHLCPPYISFFGLGAVSAA 345
Query: 346 VMXXXXXXXXXXXXMFTRNIYKLSFRPKLTPN---WVA-----FFGLGAVTAAVM 392
VM MF RNIY L+FR + + WV FG GA T+ +
Sbjct: 346 VMSSADSSILSASSMFARNIYHLAFRQEASDKEIVWVMRITIFLFG-GAATSMAL 399
>MGI|MGI:1927126 [details] [associations]
symbol:Slc5a7 "solute carrier family 5 (choline
transporter), member 7" species:10090 "Mus musculus" [GO:0005215
"transporter activity" evidence=IEA] [GO:0005307 "choline:sodium
symporter activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=ISO;IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006814 "sodium ion transport" evidence=IEA]
[GO:0007271 "synaptic transmission, cholinergic" evidence=IMP]
[GO:0007274 "neuromuscular synaptic transmission" evidence=IMP]
[GO:0008292 "acetylcholine biosynthetic process" evidence=ISO;IMP]
[GO:0015220 "choline transmembrane transporter activity"
evidence=ISO;IDA;IMP] [GO:0015293 "symporter activity"
evidence=IEA] [GO:0015871 "choline transport" evidence=ISO;IDA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISO;NAS] [GO:0033265 "choline binding"
evidence=IDA] [GO:0035725 "sodium ion transmembrane transport"
evidence=ISO] [GO:0042136 "neurotransmitter biosynthetic process"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0055085 "transmembrane transport" evidence=IEA;ISO;IMP]
InterPro:IPR001734 Pfam:PF00474 PROSITE:PS00456 PROSITE:PS00457
PROSITE:PS50283 MGI:MGI:1927126 GO:GO:0016021 GO:GO:0005886
GO:GO:0043025 GO:GO:0007274 GO:GO:0007271 GO:GO:0033265
PANTHER:PTHR11819 GO:GO:0008292 GO:GO:0015220 eggNOG:COG0591
GeneTree:ENSGT00690000101915 HOGENOM:HOG000016386 KO:K14387
CTD:60482 HOVERGEN:HBG054160 OMA:HAKYQKP OrthoDB:EOG4PVNZB
GO:GO:0005307 EMBL:AF276872 EMBL:AJ401467 EMBL:AK034415
EMBL:AK053063 EMBL:BC065089 IPI:IPI00308200 RefSeq:NP_071308.2
UniGene:Mm.155241 ProteinModelPortal:Q8BGY9 DIP:DIP-46467N
IntAct:Q8BGY9 STRING:Q8BGY9 PhosphoSite:Q8BGY9 PaxDb:Q8BGY9
PRIDE:Q8BGY9 Ensembl:ENSMUST00000095712 GeneID:63993 KEGG:mmu:63993
UCSC:uc008czy.1 InParanoid:Q8BGY9 BindingDB:Q8BGY9
ChEMBL:CHEMBL3013 NextBio:319843 Bgee:Q8BGY9 Genevestigator:Q8BGY9
GermOnline:ENSMUSG00000023945 Uniprot:Q8BGY9
Length = 580
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 174/408 (42%), Positives = 238/408 (58%)
Query: 4 VYGLAGIIIFYTLVLAIGVWAGTKQKNHGEEE-----VMLAGRNVGLFVGVLTLTATWVG 58
V GL II+FY L+ +G+WA K KN G E +++ GR++GL VG T+TATWVG
Sbjct: 5 VEGLVAIILFYLLIFLVGIWAAWKTKNSGNPEERSEAIIVGGRDIGLLVGGFTMTATWVG 64
Query: 59 GGYINATAEALFTTG--LVWCQVPLGYSLALVVGALLFVKPMREASYVTMLDPFQQAYGN 116
GGYIN TAEA++ G L W Q P+GYSL+L++G L F KPMR YVTMLDPFQQ YG
Sbjct: 65 GGYINGTAEAVYGPGCGLAWAQAPIGYSLSLILGGLFFAKPMRSKGYVTMLDPFQQIYGK 124
Query: 117 RIGGLLFLPALCGDVFWIASVLSSLGSVVDTLCLSFPFAISNAQPYLKEPNMTIFSKIDW 176
R+GGLLF+PAL G++FW A++ S+LG+ + + + IS L +++ +
Sbjct: 125 RMGGLLFIPALMGEMFWAAAIFSALGATISVI-IDVDVNISVIVSALIA---ILYTLVGG 180
Query: 177 LGTVETKDYGLWIEGMLLLAFGGIPWQCLSFPFAISNAQPYLKEPNMT-IFSKVD--WLG 233
L +V D ++ L F G+ W +S PFA+S+ P + + T + +K WLG
Sbjct: 181 LYSVAYTDV---VQ--LFCIFIGL-W--ISVPFALSH--PAVTDIGFTAVHAKYQSPWLG 230
Query: 234 TVETKDYGLWIEGMLLLAFGGIPWQSYFQRVLSLRSTKAAYHLSTLSALLCFSMAIPAGA 293
T+E+ + W++ LLL GGIPWQ+YFQRVLS S A LS L+A C MA+PA
Sbjct: 231 TIESVEVYTWLDNFLLLMLGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCLVMALPAIC 290
Query: 294 FGIIARMVDWSAIPT-YGKNFTAAESNSVLPLVLKELTPNWVAFFGLGAVTAAVMXXXXX 352
G I DW+ Y T E++ +LP+VL+ L P +++FFGLGAV+AAVM
Sbjct: 291 IGAIGASTDWNQTAYGYPDPKTKEEADMILPIVLQYLCPVYISFFGLGAVSAAVMSSADS 350
Query: 353 XXXXXXXMFTRNIYKLSFRPKLTPN---WVA-----FFGLGAVTAAVM 392
MF RNIY+LSFR + WV FG A A++
Sbjct: 351 SILSASSMFARNIYQLSFRQNASDKEIVWVMRITVLVFGASATAMALL 398
>UNIPROTKB|Q2KI26 [details] [associations]
symbol:SLC5A7 "Solute carrier family 5 (Choline
transporter), member 7" species:9913 "Bos taurus" [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0033265 "choline binding"
evidence=IEA] [GO:0008292 "acetylcholine biosynthetic process"
evidence=IEA] [GO:0007274 "neuromuscular synaptic transmission"
evidence=IEA] [GO:0007271 "synaptic transmission, cholinergic"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005307 "choline:sodium symporter activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001734
Pfam:PF00474 PROSITE:PS50283 GO:GO:0016021 GO:GO:0005886
GO:GO:0043025 GO:GO:0007274 GO:GO:0007271 GO:GO:0033265
PANTHER:PTHR11819 GO:GO:0008292 eggNOG:COG0591
GeneTree:ENSGT00690000101915 HOGENOM:HOG000016386 KO:K14387
CTD:60482 HOVERGEN:HBG054160 OMA:HAKYQKP OrthoDB:EOG4PVNZB
GO:GO:0005307 EMBL:DAAA02031040 EMBL:DAAA02031041 EMBL:BC112794
IPI:IPI00696740 RefSeq:NP_001039581.1 UniGene:Bt.31731
Ensembl:ENSBTAT00000005693 GeneID:512311 KEGG:bta:512311
InParanoid:Q2KI26 NextBio:20870329 Uniprot:Q2KI26
Length = 580
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 173/409 (42%), Positives = 240/409 (58%)
Query: 4 VYGLAGIIIFYTLVLAIGVWAGTKQKNHGEEE-----VMLAGRNVGLFVGVLTLTATWVG 58
V GL I++FY L+L +G+WA + KN G E +++ GR++GL VG T+TATWVG
Sbjct: 5 VEGLVAIVVFYLLILLVGIWAAWRTKNSGSAEERSEAIIVGGRDIGLLVGGFTMTATWVG 64
Query: 59 GGYINATAEALFTT--GLVWCQVPLGYSLALVVGALLFVKPMREASYVTMLDPFQQAYGN 116
GGYIN TAEA++ GL W Q P+GYSL+L++G L F KPMR YVTMLDPFQQ YG
Sbjct: 65 GGYINGTAEAVYVPDYGLAWAQAPIGYSLSLILGGLFFAKPMRSKGYVTMLDPFQQIYGK 124
Query: 117 RIGGLLFLPALCGDVFWIASVLSSLGSVVDTLCLSFPFAISNAQPYLKEPNMTIFSKIDW 176
R+GGLLF+PAL G++FW A++ S+LG+ + + A + + T+++ +
Sbjct: 125 RMGGLLFIPALMGEMFWAAAIFSALGATISVIIR----ASVHMSVIVSALIATLYTLVGG 180
Query: 177 LGTVETKDYGLWIEGMLLLAFGGIPWQCLSFPFAISNAQPYLKEPNMT-IFSKVD--WLG 233
L +V D ++ L F G+ W +S PFA+SN+ + + T + +K WLG
Sbjct: 181 LYSVAYTDV---VQ--LFCIFVGL-W--ISVPFALSNSA--VADIGFTALHTKYQKPWLG 230
Query: 234 TVETKDYGLWIEGMLLLAFGGIPWQSYFQRVLSLRSTKAAYHLSTLSALLCFSMAIPAGA 293
T+E + W++ LLL GGIPWQ+YFQRVLS S A LS L+A C MA+PA
Sbjct: 231 TIEPFEIYTWLDSFLLLMLGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCLVMALPAVL 290
Query: 294 FGIIARMVDWSAIPTYGKNFTAA--ESNSVLPLVLKELTPNWVAFFGLGAVTAAVMXXXX 351
G I W+ YG E++ +LP+VLK L P ++++FGLGAV+AAVM
Sbjct: 291 IGAIGASTAWNQT-AYGPLAPREKQEADMILPIVLKYLCPVYISYFGLGAVSAAVMSSAD 349
Query: 352 XXXXXXXXMFTRNIYKLSFRPKLTPN---WV----AF-FGLGAVTAAVM 392
MF RNIY+LSFR + WV F FG A+T A++
Sbjct: 350 SSILSASSMFARNIYQLSFRQNASDKEIVWVMRITVFVFGASAMTMALL 398
>UNIPROTKB|F1SU25 [details] [associations]
symbol:SLC5A7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0033265
"choline binding" evidence=IEA] [GO:0008292 "acetylcholine
biosynthetic process" evidence=IEA] [GO:0007274 "neuromuscular
synaptic transmission" evidence=IEA] [GO:0007271 "synaptic
transmission, cholinergic" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005307 "choline:sodium symporter
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001734 Pfam:PF00474 PROSITE:PS50283
GO:GO:0016021 GO:GO:0005886 GO:GO:0043025 GO:GO:0007274
GO:GO:0007271 GO:GO:0033265 PANTHER:PTHR11819 GO:GO:0008292
GeneTree:ENSGT00690000101915 KO:K14387 OMA:DINIKMS CTD:60482
GO:GO:0005307 EMBL:CU469416 RefSeq:XP_003124900.1 UniGene:Ssc.93903
Ensembl:ENSSSCT00000008917 GeneID:100512044 KEGG:ssc:100512044
Uniprot:F1SU25
Length = 579
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 171/409 (41%), Positives = 240/409 (58%)
Query: 4 VYGLAGIIIFYTLVLAIGVWAGTKQKNHGEEE-----VMLAGRNVGLFVGVLTLTATWVG 58
V GL I++FY L+L +G+WA + KN G E +++ GR++GL VG T+TATWVG
Sbjct: 5 VEGLIAIVVFYLLILLVGIWAAWRTKNSGSAEERSEAIIVGGRDIGLLVGGFTMTATWVG 64
Query: 59 GGYINATAEALFTT--GLVWCQVPLGYSLALVVGALLFVKPMREASYVTMLDPFQQAYGN 116
GGYIN TAEA++ GL W Q P+GYSL+L++G L F KPMR YVTMLDPFQQ YG
Sbjct: 65 GGYINGTAEAVYVPDYGLAWAQAPIGYSLSLILGGLFFAKPMRSKGYVTMLDPFQQIYGK 124
Query: 117 RIGGLLFLPALCGDVFWIASVLSSLGSVVDTLCLSFPFAISNAQPYLKEPNMTIFSKIDW 176
R+GGLLF+PAL G++FW A++ S+LG+ + + + A + T+++ +
Sbjct: 125 RMGGLLFIPALMGEMFWAAAIFSALGATISVIINTDVHASIIVSALIA----TLYTLVGG 180
Query: 177 LGTVETKDYGLWIEGMLLLAFGGIPWQCLSFPFAISNAQPYLKEPNMT-IFSKVD--WLG 233
L +V D ++ L F G+ W +S PFA+SN+ + + T + +K WLG
Sbjct: 181 LYSVAYTDV---VQ--LFCIFVGL-W--ISVPFALSNSA--VTDIGFTALHTKYQKPWLG 230
Query: 234 TVETKDYGLWIEGMLLLAFGGIPWQSYFQRVLSLRSTKAAYHLSTLSALLCFSMAIPAGA 293
T+E+ + W++ LLL GGIPWQ+YFQRVLS S A LS L+A C MA+P
Sbjct: 231 TIESFEVYTWLDSFLLLMLGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCMVMALPPIL 290
Query: 294 FGIIARMVDWSAIPTYGKNFTA--AESNSVLPLVLKELTPNWVAFFGLGAVTAAVMXXXX 351
G I DW+ TY + +++ +LP+VLK L P ++++FGLGAV+AAVM
Sbjct: 291 IGAIGASTDWNQT-TYKPDTPKDNQQADMILPIVLKYLCPMYISYFGLGAVSAAVMSSAD 349
Query: 352 XXXXXXXXMFTRNIYKLSFRPKLTPN---WV----AF-FGLGAVTAAVM 392
MF RNIY+LSFR + WV F FG A A++
Sbjct: 350 SSILSASSMFARNIYQLSFRQNASDREIVWVMRITVFVFGASATAMALL 398
>UNIPROTKB|E2RAJ0 [details] [associations]
symbol:SLC5A7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0033265 "choline binding" evidence=IEA] [GO:0008292
"acetylcholine biosynthetic process" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IEA] [GO:0007271
"synaptic transmission, cholinergic" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005307 "choline:sodium
symporter activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001734 Pfam:PF00474
PROSITE:PS50283 GO:GO:0016021 GO:GO:0005886 GO:GO:0043025
GO:GO:0007274 GO:GO:0007271 GO:GO:0033265 PANTHER:PTHR11819
GO:GO:0008292 GeneTree:ENSGT00690000101915 GO:GO:0005307
EMBL:AAEX03007400 Ensembl:ENSCAFT00000003276 OMA:PDYYWTW
Uniprot:E2RAJ0
Length = 578
Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
Identities = 175/409 (42%), Positives = 241/409 (58%)
Query: 4 VYGLAGIIIFYTLVLAIGVWAGTKQKNHGEEE-----VMLAGRNVGLFVGVLTLTATWVG 58
V GL II+FY L+L +G+WA + KN G E +++ GR++GL VG T+TATWVG
Sbjct: 5 VEGLIAIIVFYLLILLVGIWAAWRTKNSGSSEERSEAIIVGGRDIGLLVGAFTMTATWVG 64
Query: 59 GGYINATAEALFTT--GLVWCQVPLGYSLALVVGALLFVKPMREASYVTMLDPFQQAYGN 116
GGYIN TAEA++ GL W Q P+GYSL+L++G L F KPMR YVTMLDPFQQ YG
Sbjct: 65 GGYINGTAEAVYVPDYGLAWAQAPIGYSLSLILGGLFFAKPMRSKGYVTMLDPFQQIYGK 124
Query: 117 RIGGLLFLPALCGDVFWIASVLSSLGSVVDTLCLSFPFAISNAQPYLKEPNMTIFSKIDW 176
R+GGLLF+PAL G++FW A++ S+LG+ + + +S A A + T+++ +
Sbjct: 125 RMGGLLFIPALMGEMFWAAAIFSALGATISVI-IS---ANVQASVIVSALIATLYTLVGG 180
Query: 177 LGTVETKDYGLWIEGMLLLAFGGIPWQCLSFPFAISNAQPYLKEPNMT-IFSKVD--WLG 233
L +V D ++ L F G+ W +S PFA+S++ + + T + +K WLG
Sbjct: 181 LYSVAYTDV---VQ--LFCIFIGL-W--ISVPFALSHSA--VTDIGYTALHTKYQKPWLG 230
Query: 234 TVETKDYGLWIEGMLLLAFGGIPWQSYFQRVLSLRSTKAAYHLSTLSALLCFSMAIPAGA 293
T+E+ + W++ LLL GGIPWQ+YFQRVLS S A LS L+A C MA+PA
Sbjct: 231 TIESFEVYTWLDSFLLLMLGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCLIMALPAIL 290
Query: 294 FGIIARMVDWSAIPTYGKNFTAA--ESNSVLPLVLKELTPNWVAFFGLGAVTAAVMXXXX 351
G I DW+ TY E++ +LP+VLK L P +++FFGLGAV+AAVM
Sbjct: 291 IGAIGASTDWNQT-TYRPPDPKGNKEADMILPIVLKYLCPVYISFFGLGAVSAAVMSSAD 349
Query: 352 XXXXXXXXMFTRNIYKLSFRPKLTPN---WV----AF-FGLGAVTAAVM 392
MF RNIY+L FR + WV F FG A A++
Sbjct: 350 SSILSASSMFARNIYQL-FRQNASDKEIIWVMRITVFVFGASATAMALL 397
>WB|WBGene00000501 [details] [associations]
symbol:cho-1 species:6239 "Caenorhabditis elegans"
[GO:0016020 "membrane" evidence=IEA] [GO:0005215 "transporter
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0015871 "choline
transport" evidence=ISS;IDA] [GO:0045202 "synapse" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0008021 "synaptic vesicle"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0015220 "choline
transmembrane transporter activity" evidence=ISS;IDA]
InterPro:IPR001734 Pfam:PF00474 PROSITE:PS00456 PROSITE:PS00457
PROSITE:PS50283 GO:GO:0016021 GO:GO:0030424 GO:GO:0043025
GO:GO:0008021 GO:GO:0015293 GO:GO:0006814 PANTHER:PTHR11819
EMBL:Z81049 GO:GO:0008292 GO:GO:0015220 eggNOG:COG0591
GeneTree:ENSGT00690000101915 EMBL:AB030946 PIR:T20037
RefSeq:NP_502539.1 UniGene:Cel.19528 ProteinModelPortal:O02228
PaxDb:O02228 EnsemblMetazoa:C48D1.3 GeneID:178274
KEGG:cel:CELE_C48D1.3 UCSC:C48D1.3 CTD:178274 WormBase:C48D1.3
HOGENOM:HOG000016386 InParanoid:O02228 KO:K14387 OMA:DINIKMS
NextBio:900458 Uniprot:O02228
Length = 576
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 171/388 (44%), Positives = 224/388 (57%)
Query: 1 MVDVYGLAGIIIFYTLVLAIGVWAGTKQKNHGE---------EEVMLAGRNVGLFVGVLT 51
M D+ G+ I+ FY L+L +G+WAG K K+ E EEVMLAGRN+G VG+ T
Sbjct: 1 MADLLGIVAIVFFYVLILVVGIWAGRKSKSSKELESEAGAATEEVMLAGRNIGTLVGIFT 60
Query: 52 LTATWVGGGYINATAEALFTTGLVWCQVPLGYSLALVVGALLFVKPMREASYVTMLDPFQ 111
+TATWVGG YIN TAEAL+ GL+ CQ P+GY+++LV+G LLF K MRE Y+TMLDPFQ
Sbjct: 61 MTATWVGGAYINGTAEALYNGGLLGCQAPVGYAISLVMGGLLFAKKMREEGYITMLDPFQ 120
Query: 112 QAYGNRIGGLLFLPALCGDVFWIASVLSSLGSVVDTLCLSFPFAISNAQPYLKEPNMTIF 171
YG RIGGL+++PAL G+ FW A++LS+LG+ + + L NA L + +F
Sbjct: 121 HKYGQRIGGLMYVPALLGETFWTAAILSALGATLSVI-LGIDM---NASVTLSAC-IAVF 175
Query: 172 SKIDWLGTVETKDYGLWIEGMLLLAFGGIPWQCLSFPFAISNAQPYLKEPNMTIFSKVDW 231
+ G Y ++ L F G+ W C+ P A+ K+ + +
Sbjct: 176 --YTFTGGYYAVAYTDVVQ--LFCIFVGL-WVCV--PAAM--VHDGAKDISRNAGDWIGE 226
Query: 232 LGTVETKDYGLWIEGMLLLAFGGIPWQSYFQRVLSLRSTKAAYHLSTLSALLCFSMAIPA 291
+G K+ LWI+ MLLL FGGIPWQ YFQRVLS ++ A LS ++ + C MAIP
Sbjct: 227 IGGF--KETSLWIDCMLLLVFGGIPWQVYFQRVLSSKTAHGAQTLSFVAGVGCILMAIPP 284
Query: 292 GAFGIIARMVDWSAIP-TYGKNFTAAES------NSVLPLVLKELTPNWVAFFGLGAVTA 344
G IAR DW + N T ES N V+PLV + LTP WVAF GLGAV+A
Sbjct: 285 ALIGAIARNTDWRMTDYSPWNNGTKVESIPPDKRNMVVPLVFQYLTPRWVAFIGLGAVSA 344
Query: 345 AVMXXXXXXXXXXXXMFTRNIYKLSFRP 372
AVM MF NI+KL+ RP
Sbjct: 345 AVMSSADSSVLSAASMFAHNIWKLTIRP 372
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 28/56 (50%), Positives = 33/56 (58%)
Query: 363 RN-IYKLSFRPKLTPNWVAFFGLGAVTAAVMXXXXXXXXXXXXMFTRNIYKLSFRP 417
RN + L F+ LTP WVAF GLGAV+AAVM MF NI+KL+ RP
Sbjct: 318 RNMVVPLVFQ-YLTPRWVAFIGLGAVSAAVMSSADSSVLSAASMFAHNIWKLTIRP 372
>UNIPROTKB|O02228 [details] [associations]
symbol:cho-1 "High-affinity choline transporter 1"
species:6239 "Caenorhabditis elegans" [GO:0008292 "acetylcholine
biosynthetic process" evidence=ISS] [GO:0015220 "choline
transmembrane transporter activity" evidence=ISS]
InterPro:IPR001734 Pfam:PF00474 PROSITE:PS00456 PROSITE:PS00457
PROSITE:PS50283 GO:GO:0016021 GO:GO:0030424 GO:GO:0043025
GO:GO:0008021 GO:GO:0015293 GO:GO:0006814 PANTHER:PTHR11819
EMBL:Z81049 GO:GO:0008292 GO:GO:0015220 eggNOG:COG0591
GeneTree:ENSGT00690000101915 EMBL:AB030946 PIR:T20037
RefSeq:NP_502539.1 UniGene:Cel.19528 ProteinModelPortal:O02228
PaxDb:O02228 EnsemblMetazoa:C48D1.3 GeneID:178274
KEGG:cel:CELE_C48D1.3 UCSC:C48D1.3 CTD:178274 WormBase:C48D1.3
HOGENOM:HOG000016386 InParanoid:O02228 KO:K14387 OMA:DINIKMS
NextBio:900458 Uniprot:O02228
Length = 576
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 171/388 (44%), Positives = 224/388 (57%)
Query: 1 MVDVYGLAGIIIFYTLVLAIGVWAGTKQKNHGE---------EEVMLAGRNVGLFVGVLT 51
M D+ G+ I+ FY L+L +G+WAG K K+ E EEVMLAGRN+G VG+ T
Sbjct: 1 MADLLGIVAIVFFYVLILVVGIWAGRKSKSSKELESEAGAATEEVMLAGRNIGTLVGIFT 60
Query: 52 LTATWVGGGYINATAEALFTTGLVWCQVPLGYSLALVVGALLFVKPMREASYVTMLDPFQ 111
+TATWVGG YIN TAEAL+ GL+ CQ P+GY+++LV+G LLF K MRE Y+TMLDPFQ
Sbjct: 61 MTATWVGGAYINGTAEALYNGGLLGCQAPVGYAISLVMGGLLFAKKMREEGYITMLDPFQ 120
Query: 112 QAYGNRIGGLLFLPALCGDVFWIASVLSSLGSVVDTLCLSFPFAISNAQPYLKEPNMTIF 171
YG RIGGL+++PAL G+ FW A++LS+LG+ + + L NA L + +F
Sbjct: 121 HKYGQRIGGLMYVPALLGETFWTAAILSALGATLSVI-LGIDM---NASVTLSAC-IAVF 175
Query: 172 SKIDWLGTVETKDYGLWIEGMLLLAFGGIPWQCLSFPFAISNAQPYLKEPNMTIFSKVDW 231
+ G Y ++ L F G+ W C+ P A+ K+ + +
Sbjct: 176 --YTFTGGYYAVAYTDVVQ--LFCIFVGL-WVCV--PAAM--VHDGAKDISRNAGDWIGE 226
Query: 232 LGTVETKDYGLWIEGMLLLAFGGIPWQSYFQRVLSLRSTKAAYHLSTLSALLCFSMAIPA 291
+G K+ LWI+ MLLL FGGIPWQ YFQRVLS ++ A LS ++ + C MAIP
Sbjct: 227 IGGF--KETSLWIDCMLLLVFGGIPWQVYFQRVLSSKTAHGAQTLSFVAGVGCILMAIPP 284
Query: 292 GAFGIIARMVDWSAIP-TYGKNFTAAES------NSVLPLVLKELTPNWVAFFGLGAVTA 344
G IAR DW + N T ES N V+PLV + LTP WVAF GLGAV+A
Sbjct: 285 ALIGAIARNTDWRMTDYSPWNNGTKVESIPPDKRNMVVPLVFQYLTPRWVAFIGLGAVSA 344
Query: 345 AVMXXXXXXXXXXXXMFTRNIYKLSFRP 372
AVM MF NI+KL+ RP
Sbjct: 345 AVMSSADSSVLSAASMFAHNIWKLTIRP 372
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 28/56 (50%), Positives = 33/56 (58%)
Query: 363 RN-IYKLSFRPKLTPNWVAFFGLGAVTAAVMXXXXXXXXXXXXMFTRNIYKLSFRP 417
RN + L F+ LTP WVAF GLGAV+AAVM MF NI+KL+ RP
Sbjct: 318 RNMVVPLVFQ-YLTPRWVAFIGLGAVSAAVMSSADSSVLSAASMFAHNIWKLTIRP 372
>UNIPROTKB|E1C8V1 [details] [associations]
symbol:LOC428094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005215 "transporter activity" evidence=IEA]
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001734
Pfam:PF00474 PROSITE:PS50283 GO:GO:0016021 GO:GO:0055085
GO:GO:0005215 PANTHER:PTHR11819 GeneTree:ENSGT00690000101915
EMBL:AADN02004882 IPI:IPI00593162 Ensembl:ENSGALT00000027828
OMA:PMRSKNY Uniprot:E1C8V1
Length = 525
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 147/408 (36%), Positives = 222/408 (54%)
Query: 2 VDVYGLAGIIIFYTLVLAIGVWAGTK----QKNHGEEEV-MLAGRNVGLFVGVLTLTATW 56
+++ GL + +F+T LA G+WA K Q+N E+ ++ GRN+ + +G+ T TATW
Sbjct: 3 LNIPGLVSLSVFFTFTLAAGIWASWKSRKEQQNQNPTEMAIVGGRNINVCIGLFTATATW 62
Query: 57 VGGGYINATAEALF--TTGLVWCQVPLGYSLALVVGALLFVKPMREASYVTMLDPFQQAY 114
VGG YI+ TAE ++ + GL+W Q P+G++L+LV+G FV PMR +Y+T++DP Q+AY
Sbjct: 63 VGGAYISGTAEIVYLPSKGLLWVQAPVGFALSLVIGGFFFVNPMRSKNYMTVMDPLQEAY 122
Query: 115 GNRIGGLLFLPALCGDVFWIASVLSSLGSVVDTLC-LSFPFAISNAQPYLKEPNMTIFSK 173
GN +G LLF+P L G+VFW A++L+SLG+ + + + AI+ L + +++
Sbjct: 123 GNMMGSLLFIPPLLGEVFWFAAILASLGATMRVILDIGGSLAIT-----LSACTVILYTL 177
Query: 174 IDWLGTVETKDYGLWIEGMLLLAFGGIPWQCLSFPFAISNAQPYLKEPNMTIFSKVD-WL 232
+ L +V D I+ ++ + + C+ PFA+ N+ T D W+
Sbjct: 178 LGGLYSVAYTDV---IQ-LVFITLSLLV--CI--PFALINSATESIYYTATHKHYQDPWI 229
Query: 233 GTVETKDYGLWIEGMLLLAFGGIPWQSYFQRVLSLRSTKAAYHLSTLSALLCFSMAIPAG 292
G +E + G W++ L G IPWQ++FQRVLS S A +S LS L CF MAIP+
Sbjct: 230 GKIEKQYLGRWLDDFFYLVLGSIPWQTFFQRVLSTASPSQARFISYLSGLGCFLMAIPSV 289
Query: 293 AFGIIARMVDWSAIPTYG--KNFTAAESNSVLPLVLKELTPNWVAFFGLGAVTAAVMXXX 350
G +A DW+ +YG ES +LP VL L P +++ GLGA+ AA M
Sbjct: 290 LIGAVAASTDWNQT-SYGLPSPLERGESAMILPFVLHYLCPAYISIAGLGAIAAAAMSSA 348
Query: 351 XXXXXXXXXMFTRNIYKLSFRPKLTPN---W-----VAFFGLGAVTAA 390
MF NIY+ R K T W + FG GA + A
Sbjct: 349 DSALLSAGSMFAHNIYRKILRKKATEREVLWAMRTSMLVFGAGAASLA 396
>UNIPROTKB|F5H382 [details] [associations]
symbol:SLC5A7 "High affinity choline transporter 1"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007271 "synaptic transmission, cholinergic" evidence=IEA]
[GO:0007274 "neuromuscular synaptic transmission" evidence=IEA]
[GO:0008292 "acetylcholine biosynthetic process" evidence=IEA]
[GO:0015220 "choline transmembrane transporter activity"
evidence=IEA] [GO:0033265 "choline binding" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] InterPro:IPR001734
Pfam:PF00474 PROSITE:PS50283 GO:GO:0016021 GO:GO:0005886
GO:GO:0043025 GO:GO:0007274 GO:GO:0007271 GO:GO:0033265
PANTHER:PTHR11819 GO:GO:0008292 GO:GO:0015220 EMBL:AC009963
HGNC:HGNC:14025 IPI:IPI01009671 ProteinModelPortal:F5H382
Ensembl:ENST00000540517 ArrayExpress:F5H382 Bgee:F5H382
Uniprot:F5H382
Length = 475
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 124/308 (40%), Positives = 172/308 (55%)
Query: 98 MREASYVTMLDPFQQAYGNRIGGLLFLPALCGDVFWIASVLSSLGSVVDTLCLSFPFAIS 157
MR YVTMLDPFQQ YG R+GGLLF+PAL G++FW A++ S+LG+ + + + IS
Sbjct: 1 MRSKGYVTMLDPFQQIYGKRMGGLLFIPALMGEMFWAAAIFSALGATISVI-IDVDMHIS 59
Query: 158 NAQPYLKEPNMTIFSKIDWLGTVETKDYGLWIEGMLLLAFGGIPWQCLSFPFAISNAQPY 217
+ T+++ + L +V D ++ L F G+ W +S PFA+S+ P
Sbjct: 60 ---VIISALIATLYTLVGGLYSVAYTDV---VQ--LFCIFVGL-W--ISVPFALSH--PA 106
Query: 218 LKEPNMT-IFSKVD--WLGTVETKDYGLWIEGMLLLAFGGIPWQSYFQRVLSLRSTKAAY 274
+ + T + +K WLGTV++ + W++ LLL GGIPWQ+YFQRVLS S A
Sbjct: 107 VADIGFTAVHAKYQKPWLGTVDSSEVYSWLDSFLLLMLGGIPWQAYFQRVLSSSSATYAQ 166
Query: 275 HLSTLSALLCFSMAIPAGAFGIIARMVDWSAIPTYG--KNFTAAESNSVLPLVLKELTPN 332
LS L+A C MAIPA G I DW+ YG T E++ +LP+VL+ L P
Sbjct: 167 VLSFLAAFGCLVMAIPAILIGAIGASTDWNQT-AYGLPDPKTTEEADMILPIVLQYLCPV 225
Query: 333 WVAFFGLGAVTAAVMXXXXXXXXXXXXMFTRNIYKLSFRPKLTPN---WV----AF-FGL 384
+++FFGLGAV+AAVM MF RNIY+LSFR + WV F FG
Sbjct: 226 YISFFGLGAVSAAVMSSADSSILSASSMFARNIYQLSFRQNASDKEIVWVMRITVFVFGA 285
Query: 385 GAVTAAVM 392
A A++
Sbjct: 286 SATAMALL 293
Score = 117 (46.2 bits), Expect = 0.00076, P = 0.00076
Identities = 23/43 (53%), Positives = 28/43 (65%)
Query: 374 LTPNWVAFFGLGAVTAAVMXXXXXXXXXXXXMFTRNIYKLSFR 416
L P +++FFGLGAV+AAVM MF RNIY+LSFR
Sbjct: 222 LCPVYISFFGLGAVSAAVMSSADSSILSASSMFARNIYQLSFR 264
>UNIPROTKB|E1BZW4 [details] [associations]
symbol:SLC5A7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005307 "choline:sodium symporter activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007271 "synaptic
transmission, cholinergic" evidence=IEA] [GO:0007274 "neuromuscular
synaptic transmission" evidence=IEA] [GO:0008292 "acetylcholine
biosynthetic process" evidence=IEA] [GO:0033265 "choline binding"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
InterPro:IPR001734 Pfam:PF00474 PROSITE:PS50283 GO:GO:0016021
GO:GO:0005886 GO:GO:0043025 GO:GO:0033265 PANTHER:PTHR11819
GeneTree:ENSGT00690000101915 GO:GO:0005307 EMBL:AADN02017878
IPI:IPI00821248 Ensembl:ENSGALT00000036570 Uniprot:E1BZW4
Length = 237
Score = 171 (65.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 45/116 (38%), Positives = 59/116 (50%)
Query: 287 MAIPAGAFGIIARMVDWSAIPTYGKNFTAA--ESNSVLPLVLKELTPNWVAFFGLGAVTA 344
MAIPA G I W+ YG A E++ +LP+VL+ L P +++FFGLGAV+A
Sbjct: 1 MAIPAVLIGAIGASTAWNQTE-YGVPDPIANKEADMILPIVLQYLCPVYISFFGLGAVSA 59
Query: 345 AVMXXXXXXXXXXXXMFTRNIYKLSFRPKLTPN---WVA-----FFGLGAVTAAVM 392
AVM MF RNIY+LSFR + WV FG A A++
Sbjct: 60 AVMSSADSSILSASSMFARNIYQLSFRQNASDREIVWVMRITVFLFGASATAMALL 115
Score = 117 (46.2 bits), Expect = 0.00019, P = 0.00019
Identities = 23/43 (53%), Positives = 28/43 (65%)
Query: 374 LTPNWVAFFGLGAVTAAVMXXXXXXXXXXXXMFTRNIYKLSFR 416
L P +++FFGLGAV+AAVM MF RNIY+LSFR
Sbjct: 44 LCPVYISFFGLGAVSAAVMSSADSSILSASSMFARNIYQLSFR 86
>TIGR_CMR|BA_3607 [details] [associations]
symbol:BA_3607 "sodium/pantothenate symporter, putative"
species:198094 "Bacillus anthracis str. Ames" [GO:0015233
"pantothenate transmembrane transporter activity" evidence=ISS]
[GO:0015498 "pantothenate:sodium symporter activity" evidence=ISS]
[GO:0015887 "pantothenate transmembrane transport" evidence=ISS]
InterPro:IPR001734 InterPro:IPR011849 InterPro:IPR018212
InterPro:IPR019900 Pfam:PF00474 PROSITE:PS00456 PROSITE:PS50283
GO:GO:0016021 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR PANTHER:PTHR11819 TIGRFAMs:TIGR00813
GO:GO:0015081 GO:GO:0031402 GO:GO:0015233 GO:GO:0071436
HOGENOM:HOG000281958 KO:K14392 ProtClustDB:PRK09442
TIGRFAMs:TIGR02119 RefSeq:NP_845877.1 RefSeq:YP_020242.1
RefSeq:YP_029603.1 DNASU:1083802 EnsemblBacteria:EBBACT00000009060
EnsemblBacteria:EBBACT00000017221 EnsemblBacteria:EBBACT00000021993
GeneID:1083802 GeneID:2815929 GeneID:2850913 KEGG:ban:BA_3607
KEGG:bar:GBAA_3607 KEGG:bat:BAS3346 OMA:PLTMFAT
BioCyc:BANT260799:GJAJ-3408-MONOMER
BioCyc:BANT261594:GJ7F-3517-MONOMER Uniprot:Q81YE2
Length = 479
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 89/378 (23%), Positives = 165/378 (43%)
Query: 5 YGLAGIIIFYTLVLAIGVWAGTKQK----NHGEEEVMLAGRNVGLFVGVLTLTATW-VGG 59
Y + +II + +V IGV+A + + N +E L GR +G + +T+ AT+
Sbjct: 4 YVIIPMIISFIVVFLIGVYASRRVQATAPNKFLQEYFLGGRELGGLLLAMTMIATYGSAS 63
Query: 60 GYINATAEALFTTGLVWC-----QVPLGYSLALVVGALLFVKPMREASYVTMLDPFQQAY 114
+I A + GL W QV GY + V+G F R+ +T++D + Y
Sbjct: 64 SFIGGPGIA-YNMGLGWVLLSAIQVVTGYIVLTVIGKK-FAIIARKMEAITLIDYLKGRY 121
Query: 115 GNRIGGLLFLPALCGDVFWIASVLSSL---GSVVDTLC-LSFPFAISNAQPYLKEPNMTI 170
N+ ++ L A+C +F ++ ++ G ++++L LS+ A+ +L ++ +
Sbjct: 122 NNK--AVVILSAVCIIIFLFSATVAQWVGGGRLIESLTGLSYTTAL-----FLFTFSVLV 174
Query: 171 FSKIDWLGTVETKDYGLWIEGMLLLAFGGIPWQCLSFPFAISNAQPYLKEPNMTIFSKVD 230
+ I V D L I ++L+ I + I L + N + +
Sbjct: 175 YVLIGGFRAVALSDTLLGI--IMLVGTTIILIATVIAGGGIEKIMQELVQINPNLITPFG 232
Query: 231 WLGTVETKDY--GLWIEGMLLLAFGGIPWQSYFQRVLSLRSTKAAYHLSTLSALLCFSMA 288
G++ TK Y WI ++ + G+P S R +S +++KA + + ++ ++
Sbjct: 233 ADGSL-TKSYVTSFWI--LIGIGVVGLPQISV--RAMSYKNSKAMHQALIIGTIVVGTIM 287
Query: 289 IPAGAFGIIARMVDWSAIPTYGKNFTAAESNSVLPLVLKELTPNWVAFFGLGAVTAAVMX 348
I G+ AR+V +P G A + V+PL+ E+ P W+A L A AA+M
Sbjct: 288 IGMHLTGVFARVV----LP--G----IAVPDKVMPLLAMEVLPPWLAGVFLAAPMAAIMS 337
Query: 349 XXXXXXXXXXXMFTRNIY 366
++IY
Sbjct: 338 TVNSLLLLVSSSIIKDIY 355
>TIGR_CMR|CPS_3347 [details] [associations]
symbol:CPS_3347 "transporter, solute:sodium symporter
(SSS) family" species:167879 "Colwellia psychrerythraea 34H"
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0006810
"transport" evidence=ISS] [GO:0015370 "solute:sodium symporter
activity" evidence=ISS] InterPro:IPR001734 Pfam:PF00474
PROSITE:PS50283 GO:GO:0016021 GO:GO:0055085 GO:GO:0005215
EMBL:CP000083 GenomeReviews:CP000083_GR PANTHER:PTHR11819
eggNOG:COG0591 KO:K03307 RefSeq:YP_270023.1 STRING:Q47YU7
GeneID:3519324 KEGG:cps:CPS_3347 PATRIC:21469651 OMA:TESENAM
BioCyc:CPSY167879:GI48-3376-MONOMER Uniprot:Q47YU7
Length = 486
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 68/303 (22%), Positives = 136/303 (44%)
Query: 2 VDVYGLAGIIIFYTLVLAIGVWAGTKQKNHGEEEVMLAGRNVGLFVGVLTLTATWVGGGY 61
+D L I +++ +++ IG++AG+K KN E+ M+AGR++ + V + TL + +G
Sbjct: 1 MDFIDLVVIAVYFCVLVGIGIYAGSKVKN--SEDYMVAGRSLSMPVLLGTLVGSAIGAAA 58
Query: 62 INATAEALFTTGLVWCQVPLGYSLALVVGALLFVKP-MREASYVTMLDPFQQAYGNRIGG 120
A + G + Y L +V L F+ P +++A T+ ++ YG +
Sbjct: 59 TFGKAGKAYEVGYAILIASVAYILGYIV--LCFLAPKLQQAKIDTIPGALERRYGKTMRV 116
Query: 121 LLFLPALCGDVFWIASVLSSLGSVVDTLCLSFPFAISNAQPYLKEPNMTIFSKIDWLGTV 180
+ + + + + L ++G + + F +A + + I++ + L V
Sbjct: 117 ISAVVLVLAVIALFGAQLIAIGLTAEAVFSDFGITFEHAV-IIATLVIVIYTLVGGLLAV 175
Query: 181 ETKDYGLWIEGMLLLAFGGIPWQCLSFPFAIS-NAQPYLKEPNMTIFSKVDWLGTVETKD 239
D + +++L GG L P +S + L + + VDWLG +
Sbjct: 176 AYNDL---FQTIIMLIGGG-----LLLPLFLSIDLGDQLS--SALVSPAVDWLGGMH--- 222
Query: 240 YGLWIEGM-LLLAFGGIPWQSYFQRVLSLRST---KAAYHLSTLSALLCFSMAIPAGAFG 295
+G + + AF I S +QRV + ++T K A+ L+T + + +S+ + G
Sbjct: 223 WGYVLSFFPIYFAFVLID-PSIWQRVAASKNTANLKPAF-LATAAIFMFWSLVVVT--LG 278
Query: 296 IIA 298
+IA
Sbjct: 279 VIA 281
>TIGR_CMR|CJE_1675 [details] [associations]
symbol:CJE_1675 "sodium/proline permease" species:195099
"Campylobacter jejuni RM1221" [GO:0015824 "proline transport"
evidence=ISS] InterPro:IPR001734 InterPro:IPR011851
InterPro:IPR018212 InterPro:IPR019900 Pfam:PF00474 PROSITE:PS00457
PROSITE:PS50283 GO:GO:0016021 EMBL:CP000025
GenomeReviews:CP000025_GR PANTHER:PTHR11819 TIGRFAMs:TIGR00813
GO:GO:0031402 eggNOG:COG0591 HOGENOM:HOG000282935 KO:K11928
GO:GO:0005298 TIGRFAMs:TIGR02121 RefSeq:YP_179656.1 STRING:Q5HSS9
GeneID:3232303 KEGG:cjr:CJE1675 PATRIC:20045145 OMA:IQYDYAL
ProtClustDB:CLSK872262 BioCyc:CJEJ195099:GJC0-1706-MONOMER
Uniprot:Q5HSS9
Length = 489
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 84/390 (21%), Positives = 153/390 (39%)
Query: 11 IIFYTLVLAIGVWAGTKQKNHGEEEVMLAGRNVGLFVGVLTLTATWVGGGYINATAEALF 70
+++ L+L IG + + KN E+ L GR +G + L+ A+ + G + AL+
Sbjct: 15 VVYALLMLYIGFYFYKQNKN--SEDYFLGGRTMGPVISALSAGASDMSGWLLMGLPGALY 72
Query: 71 TTGLVWCQVPLGYSLALVVGALLFVKPMRE-----ASYVTMLDPFQQAYGNRIGGLLFLP 125
+G + + +G ++ + + K +R A+ +T+ D F+ + + L +
Sbjct: 73 VSGFIDSYIAIGLTIGASLNWIFVAKRLRIYTSVIANSLTIPDYFETRFDDDKHILRIVC 132
Query: 126 ALCGDVFWIASVLSSLGSVVDTLCLSFPFAISNAQPYLKEPNMTIFSKIDWLGTVETKDY 185
A+ +F+ V S L V F I Y I +LG + +
Sbjct: 133 AVVILIFFTFYVSSGL--VSGAKLFESTFGIR--YDYALTTGTIIIVAYTFLGGYKAVCW 188
Query: 186 GLWIEGMLLL-AFGGIPWQCLSFPFAISNAQPYLKEPNMTIFSKVDWLGTVETKDYGLWI 244
I+G+L++ A +P L A +KE S + +G + W
Sbjct: 189 TDMIQGLLMMIALIIVPLVMLYHLGGFGEAMNIVKEIKPQALSMGEGVGVISIISALAW- 247
Query: 245 EGMLLLAFGGIPWQSYFQRVLSLRSTKAAYHLSTLSALLCFSMAIPAGAFGIIARMVDWS 304
G L + G P R +S+RSTK ++T + ++ + + A M+
Sbjct: 248 -G---LGYFGQP--HILVRFMSIRSTKDI-PMATFIGIAWMAVCL------LSACMIGIL 294
Query: 305 AIPTYGKNFTAAESNSVLPLVLKELTPN-WVAFFGLGAVTAAVMXXXXXXXXXXXXMFTR 363
I K + + + +V+ +L N W+A L A+ AA+M
Sbjct: 295 GIAYVHKFELSLQDPEKIFIVMSQLLFNPWIAGILLSAILAAIMSTASSQLLVSSSTIAE 354
Query: 364 NIYKLSFRPKLTPNWVAFFG-LGAVTAAVM 392
+ YK FR + V G LG + AV+
Sbjct: 355 DFYKKIFREDAPSHIVLNLGKLGVLLVAVI 384
>ASPGD|ASPL0000063389 [details] [associations]
symbol:AN7557 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] InterPro:IPR001734 Pfam:PF00474 PROSITE:PS50283
GO:GO:0016021 GO:GO:0055085 GO:GO:0005215 PANTHER:PTHR11819
EMBL:AACD01000129 EMBL:BN001304 eggNOG:COG0591 HOGENOM:HOG000106394
RefSeq:XP_680826.1 EnsemblFungi:CADANIAT00000663 GeneID:2869474
KEGG:ani:AN7557.2 OMA:ISIMMTI OrthoDB:EOG4HX888 Uniprot:Q5AVX3
Length = 692
Score = 94 (38.1 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 45/156 (28%), Positives = 71/156 (45%)
Query: 234 TVETKDYGLWIEGMLLLAFGGIP--------WQSYFQRVLSLRSTKAAYHLSTLSALLCF 285
T+++K +W G L+L FG + WQ F + ST AY+L+ A+ F
Sbjct: 249 TMKSKGAIIW--G-LVLKFGNLALVVMDTAFWQKSFAS--EVNSTVPAYNLA---AIAVF 300
Query: 286 SMAIPAGA-FGIIARMVDWSAI-PTYGKNFTAAESNS--VLPLVLKELTPNW--VAFFGL 339
+ G G+ AR + + I PTY + T E ++ V+P ++K L + VAFF L
Sbjct: 301 GIPWGLGTVLGLSARALHLTPIFPTYPADITETEVSTGLVMPFLVKALIGDSGIVAFFVL 360
Query: 340 GAVTAAVMXXXXXXXXXXXXMFTRNIYKLSFRPKLT 375
+ A+ + + +IYK F PK T
Sbjct: 361 --LFMALTSTVSSSMIAVSSILSFDIYKTYFNPKAT 394
Score = 83 (34.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 40/145 (27%), Positives = 70/145 (48%)
Query: 5 YGLA---GIIIFYTLVLAIGVWAGTKQKNHGEEEV-MLAGRNVGLFVGVLTLTATWVGGG 60
YGL G++ +++AI V ++ E+ M+A R+VG + + ++W+
Sbjct: 15 YGLLIGLGVLFCGVILIAIKVQKAYLSEDSATSEMFMVANRSVGTGLTASAVFSSWM--- 71
Query: 61 YINAT---AEALFTTGL---VWCQVPLGYSLALVVGALLFVKPMREASYVTMLDPFQQAY 114
+IN T A + GL +W L + +AL+ AL + +R T L+ + Y
Sbjct: 72 WINETVLCAAMCYRDGLAVPLWWGSGLCFQIALMA-ALGVMAKIRVPYAHTSLEIIKMRY 130
Query: 115 GNRIGGLLFLPA-LCGDVFWIASVL 138
G IG L+F+ L +VF AS++
Sbjct: 131 GT-IGHLVFIFLNLVNNVFGCASMI 154
>UNIPROTKB|Q6R4Q5 [details] [associations]
symbol:SLC5A10 "Sodium/glucose cotransporter 5"
species:9913 "Bos taurus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006814 "sodium ion transport" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005215 "transporter
activity" evidence=IEA] InterPro:IPR001734 InterPro:IPR018212
InterPro:IPR019900 Pfam:PF00474 PROSITE:PS00457 PROSITE:PS50283
GO:GO:0016021 GO:GO:0055085 GO:GO:0005215 GO:GO:0006814
PANTHER:PTHR11819 TIGRFAMs:TIGR00813 eggNOG:COG4146
HOVERGEN:HBG052859 HOGENOM:HOG000025422
GeneTree:ENSGT00550000074313 EMBL:AY514442 IPI:IPI00711894
RefSeq:NP_001001442.1 UniGene:Bt.18204 PRIDE:Q6R4Q5
Ensembl:ENSBTAT00000004823 GeneID:407227 KEGG:bta:407227 CTD:125206
InParanoid:Q6R4Q5 KO:K14390 OMA:NQIGGYE OrthoDB:EOG47D9FT
NextBio:20818477 Uniprot:Q6R4Q5
Length = 597
Score = 110 (43.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 41/156 (26%), Positives = 72/156 (46%)
Query: 4 VYGLAGIIIFYTLVLAIGVWAGTKQKNHGEEEVMLAGRNVGLF-VGVLTLTATWVGGGYI 62
V +A I +++ L +A+G+W+ + + LAGR++ + +G +L A+ G G
Sbjct: 19 VVDIAIIAVYFALNVAVGIWSSCRASRNTVRGYFLAGRDMTWWPIGA-SLFASSEGSGLF 77
Query: 63 NATAEALFTTGLVWCQVPLGYSLALVVGALLFVKPMREASYVTMLDPFQQAYGN-RIGGL 121
A + GL + L+ A +FV + VTM + Q+ YG RI
Sbjct: 78 IGLAGSGAAGGLAVAGFEWNATYVLLALAWVFVPIYLSSEIVTMPEYMQKRYGGQRIRMY 137
Query: 122 LFLPALCGDVFWIASVLSSLGSVVDTLCLSFPFAIS 157
L + +L VF S+ G++ +CL + F +S
Sbjct: 138 LSVLSLLLSVFTKISIDLYAGALFVHICLGWNFYLS 173
Score = 64 (27.6 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 32/126 (25%), Positives = 50/126 (39%)
Query: 258 QSYFQRVLSLRSTKAAYHLSTLSALLCFSMAIPAGAF---GIIARMV---DWSAI-PTYG 310
Q QR LS R H S L + +P G G+I+R++ D + P
Sbjct: 283 QVIVQRSLSARDLN---HAKGGSILASYLKMLPMGLMVMPGMISRVLFPDDVGCVVPAEC 339
Query: 311 KNFTAAE---SNSVLPLVLKELTPNWVAFFGLGAVTAAVMXXXXXXXXXXXXMFTRNIYK 367
AE SN P ++ EL P + + + AA+M +FT +I++
Sbjct: 340 LRACGAEIGCSNIAYPKLVMELMPTGLRGLMVAVMMAALMSSLTSIFNSSSTLFTMDIWR 399
Query: 368 LSFRPK 373
RP+
Sbjct: 400 -RLRPR 404
>ZFIN|ZDB-GENE-040426-1524 [details] [associations]
symbol:slc5a1 "solute carrier family 5
(sodium/glucose cotransporter), member 1" species:7955 "Danio
rerio" [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001734
InterPro:IPR018212 InterPro:IPR019900 Pfam:PF00474 PROSITE:PS00456
PROSITE:PS50283 ZFIN:ZDB-GENE-040426-1524 GO:GO:0016021
GO:GO:0055085 GO:GO:0005215 PANTHER:PTHR11819 TIGRFAMs:TIGR00813
GeneTree:ENSGT00550000074313 EMBL:BX324123 IPI:IPI00495245
Ensembl:ENSDART00000080449 Bgee:F1QBX6 Uniprot:F1QBX6
Length = 678
Score = 99 (39.9 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 35/125 (28%), Positives = 61/125 (48%)
Query: 10 IIIFYTLVLAIGVWAGTKQKNHGEEEVMLAGRNVGLF-VGVLTLTATWVGGGYINATAEA 68
I+I++ +VLA+GVWA + LAGR++ + +G +L A+ +G G+ A
Sbjct: 52 IVIYFLVVLAVGVWAMVRTNRATVGGFFLAGRSMVWWPIGA-SLFASNIGSGHFVGIAGT 110
Query: 69 LFTTGLVWCQVPLGYSLALVVGALLFVKPMREASYVTMLDPFQQAYGN-RIGGLLFLPAL 127
G+ + +++ LFV +A VTM + ++ +G RI L + +L
Sbjct: 111 GAAAGIAIGGFEWNALVVVIILGWLFVPIYIKAGVVTMPEYLKKRFGGQRIRIYLSVLSL 170
Query: 128 CGDVF 132
C VF
Sbjct: 171 CLYVF 175
Score = 68 (29.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 37/127 (29%), Positives = 53/127 (41%)
Query: 258 QSYFQRVLSLRS---TKAAYHL-STLSALLCFSMAIPAGAFGIIARMV--DWSAI--PTY 309
Q QR LS ++ KA L L L F M P G+I+R++ D A P
Sbjct: 312 QVIVQRCLSAKNLSHVKAGCILCGYLKLLPMFLMVFP----GMISRVLYPDEIACVDPDE 367
Query: 310 GKNFTAAE---SNSVLPLVLKELTPNWVAFFGLGAVTAAVMXXXXXXXXXXXXMFTRNIY 366
K AE +N P ++ +L PN + L + A++M +FT +IY
Sbjct: 368 CKAVCGAEVGCTNIAYPKLVVDLMPNGLRGLMLSVMLASLMSSLTSIFNSASTLFTMDIY 427
Query: 367 KLSFRPK 373
RPK
Sbjct: 428 T-KIRPK 433
>UNIPROTKB|A0PJK1 [details] [associations]
symbol:SLC5A10 "Sodium/glucose cotransporter 5"
species:9606 "Homo sapiens" [GO:0005215 "transporter activity"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0006814 "sodium ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] InterPro:IPR001734 InterPro:IPR018212
InterPro:IPR019900 Pfam:PF00474 PROSITE:PS00457 PROSITE:PS50283
GO:GO:0016021 GO:GO:0055085 GO:GO:0005215 GO:GO:0006814
PANTHER:PTHR11819 TIGRFAMs:TIGR00813 EMBL:AC003957 EMBL:AC090286
eggNOG:COG4146 HOVERGEN:HBG052859 HOGENOM:HOG000025422 CTD:125206
KO:K14390 EMBL:AK057946 EMBL:AK298345 EMBL:BC034380 EMBL:BC039868
EMBL:BC062617 IPI:IPI00217554 IPI:IPI00441079 IPI:IPI00791625
IPI:IPI00873252 IPI:IPI00888822 RefSeq:NP_001035915.1
RefSeq:NP_001257577.1 RefSeq:NP_001257578.1 RefSeq:NP_689564.3
UniGene:Hs.462418 ProteinModelPortal:A0PJK1 SMR:A0PJK1
STRING:A0PJK1 PhosphoSite:A0PJK1 PRIDE:A0PJK1 DNASU:125206
Ensembl:ENST00000317977 Ensembl:ENST00000395642
Ensembl:ENST00000395643 Ensembl:ENST00000395645
Ensembl:ENST00000395647 Ensembl:ENST00000417251 GeneID:125206
KEGG:hsa:125206 UCSC:uc002gur.1 UCSC:uc002gut.1 UCSC:uc002guu.1
UCSC:uc002guv.1 GeneCards:GC17P018853 H-InvDB:HIX0018725
HGNC:HGNC:23155 HPA:HPA052014 neXtProt:NX_A0PJK1
PharmGKB:PA134940254 OMA:QAYPEMM ChiTaRS:SLC5A10 GenomeRNAi:125206
NextBio:81512 ArrayExpress:A0PJK1 Bgee:A0PJK1 CleanEx:HS_SLC5A10
Genevestigator:A0PJK1 Uniprot:A0PJK1
Length = 596
Score = 100 (40.3 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 38/150 (25%), Positives = 69/150 (46%)
Query: 10 IIIFYTLVLAIGVWAGTKQKNHGEEEVMLAGRNVGLF-VGVLTLTATWVGGGYINATAEA 68
I +++ L +A+G+W+ + + LAGR++ + +G +L A+ G G A +
Sbjct: 24 ITVYFALNVAVGIWSSCRASRNTVNGYFLAGRDMTWWPIGA-SLFASSEGSGLFIGLAGS 82
Query: 69 LFTTGLVWCQVPLGYSLALVVGALLFVKPMREASYVTMLDPFQQAYGN-RIGGLLFLPAL 127
GL + L+ A +FV + VT+ + Q+ YG RI L + +L
Sbjct: 83 GAAGGLAVAGFEWNATYVLLALAWVFVPIYISSEIVTLPEYIQKRYGGQRIRMYLSVLSL 142
Query: 128 CGDVFWIASVLSSLGSVVDTLCLSFPFAIS 157
VF S+ G++ +CL + F +S
Sbjct: 143 LLSVFTKISLDLYAGALFVHICLGWNFYLS 172
Score = 63 (27.2 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 32/126 (25%), Positives = 50/126 (39%)
Query: 258 QSYFQRVLSLRSTKAAYHLSTLSALLCFSMAIPAGAF---GIIARMV---DWSAI-PTYG 310
Q QR LS R H S L + +P G G+I+R + D + P+
Sbjct: 282 QVIVQRSLSARDLN---HAKAGSILASYLKMLPMGLIIMPGMISRALFPDDVGCVVPSEC 338
Query: 311 KNFTAAE---SNSVLPLVLKELTPNWVAFFGLGAVTAAVMXXXXXXXXXXXXMFTRNIYK 367
AE SN P ++ EL P + + + AA+M +FT +I++
Sbjct: 339 LRACGAEVGCSNIAYPKLVMELMPIGLRGLMIAVMLAALMSSLTSIFNSSSTLFTMDIWR 398
Query: 368 LSFRPK 373
RP+
Sbjct: 399 -RLRPR 403
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.139 0.441 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 454 430 0.00086 118 3 11 22 0.47 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 618 (66 KB)
Total size of DFA: 266 KB (2136 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.85u 0.09s 31.94t Elapsed: 00:00:14
Total cpu time: 31.85u 0.09s 31.94t Elapsed: 00:00:14
Start: Thu Aug 15 12:57:31 2013 End: Thu Aug 15 12:57:45 2013