Query psy14005
Match_columns 226
No_of_seqs 155 out of 1067
Neff 8.4
Searched_HMMs 13730
Date Fri Aug 16 17:07:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14005.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/14005hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1azsa_ d.58.29.1 (A:) Adenyly 100.0 3.8E-37 2.8E-41 244.7 15.0 154 39-226 6-159 (190)
2 d1azsb_ d.58.29.1 (B:) Adenyly 100.0 1.7E-35 1.3E-39 236.7 13.6 160 43-226 2-169 (199)
3 d1wc1a_ d.58.29.1 (A:) Adenyla 100.0 2.7E-34 2E-38 228.6 16.4 153 44-226 4-165 (197)
4 d1fx2a_ d.58.29.1 (A:) Recepto 100.0 8.6E-30 6.2E-34 208.1 15.1 147 39-226 4-184 (235)
5 d1w25a3 d.58.29.2 (A:294-455) 96.0 0.023 1.7E-06 40.6 9.4 59 45-104 25-83 (162)
6 d1ufwa_ d.58.7.1 (A:) Synaptoj 28.1 51 0.0037 20.6 4.7 29 76-104 36-65 (95)
7 d1jkea_ c.110.1.1 (A:) D-Tyr t 19.8 1.2E+02 0.009 20.3 8.3 96 89-186 16-141 (145)
8 d1xw8a_ c.6.2.5 (A:) Hypotheti 16.3 76 0.0055 23.5 4.3 44 52-95 60-103 (247)
9 d2qn6b1 d.58.51.1 (B:176-264) 14.5 1.2E+02 0.0091 18.3 4.4 29 64-92 58-86 (89)
10 d1djqa1 c.1.4.1 (A:1-340) Trim 13.9 2.4E+02 0.018 21.1 7.3 89 62-180 136-226 (340)
No 1
>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis familiaris) [TaxId: 9615]}
Probab=100.00 E-value=3.8e-37 Score=244.66 Aligned_cols=154 Identities=27% Similarity=0.500 Sum_probs=142.9
Q ss_pred ccCCcccCcEEEEEEecCCchhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCcEEEeEeCcEEEEEeCCCCCCCCCCCcch
Q psy14005 39 QVPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGDAYMVVSGLPQRNGKSPGTAI 118 (226)
Q Consensus 39 ~~~~~~~~~vtvlf~di~~ft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~gG~i~k~~GD~~la~fg~~~~~~~~~~~a~ 118 (226)
+.+.+++++|||||+||+|||.+++.++|+++.+++|.|+..+.+++.+|||+++|++||++|++||.|....
T Consensus 6 ~~~~~~~~~Vtvlf~Di~gfT~l~~~~~~~~~~~~l~~~~~~~~~~i~~~gg~~~k~~GD~~~a~f~~~~~~~------- 78 (190)
T d1azsa_ 6 KIYIQKHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAAENHCLRIKILGDCYYCVSGLPEARA------- 78 (190)
T ss_dssp CCEEEEEEEEEEEEEEEETHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTEEEEEEETTEEEEEESCSSCCS-------
T ss_pred hhhhhcCCcEEEEEEEcCChhHHHHhCCHHHHHHHHHHHHHHHhhcccccCccccccceeEEEEEecCCCccc-------
Confidence 4566778899999999999999999999999999999999999999999999999999999999999988766
Q ss_pred hhhhhccCCCCCCCCCCccCCCCccchHHHHHHHHHHHHHHhhhccCCCCCCCceeEEEeeecceeEEeeecCCCCceeE
Q psy14005 119 SFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLVGIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRYCL 198 (226)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~i~~~~~~~~~~~~~~~~l~~riGi~~G~v~~g~vG~~~~~~~v 198 (226)
+++.+|+.+|+++.+.+++++. ..+.++++|||||+|++++|.+|+.+++||+
T Consensus 79 -------------------------d~~~~a~~~a~~~~~~~~~~~~--~~~~~l~~riGih~G~v~~g~~G~~~~~~~~ 131 (190)
T d1azsa_ 79 -------------------------DHAHCCVEMGMDMIEAISLVRE--MTGVNVNMRVGIHSGRVHCGVLGLRKWQFDV 131 (190)
T ss_dssp -------------------------THHHHHHHHHHHHHHHHHHHHH--HHCSCCEEEEEEEEEEEEEEECSSSSCCCEE
T ss_pred -------------------------cchhHHHHHHHHHHHHHhhhhc--ccccccceEEEEeeeccccccccccccccce
Confidence 7889999999999999988763 3345799999999999999999998779999
Q ss_pred eCcHHHHHHHHhhcCCCCcEEEeccccC
Q psy14005 199 FGDTINTASRMESAGDLPSFFIVTIVMR 226 (226)
Q Consensus 199 ~G~~Vn~Aarl~~~a~~g~i~vs~~~~~ 226 (226)
||++||.|+||++.+++|+|+||+++|+
T Consensus 132 ~G~~Vn~Aarl~~~a~~~~ilvS~~~~~ 159 (190)
T d1azsa_ 132 WSNDVTLANHMEAGGKAGRIHITKATLS 159 (190)
T ss_dssp ESHHHHHHHHHHHTCCTTSEEECSTTTT
T ss_pred eccceehHHHHhccCCCCEEEECHHHHH
Confidence 9999999999999999999999999985
No 2
>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00 E-value=1.7e-35 Score=236.70 Aligned_cols=160 Identities=29% Similarity=0.553 Sum_probs=134.1
Q ss_pred cccCcEEEEEEecCCchhhcCCCC----HHHHHHHHHHHHHHHHHHHHh---cCcEEEeEeCcEEEEEeCCCCCCCCC-C
Q psy14005 43 ENFDSVTIYFSDIVGFTNISADSS----PMEVVNMLNTLYKLFDSRIRK---YDVYKVETIGDAYMVVSGLPQRNGKS-P 114 (226)
Q Consensus 43 ~~~~~vtvlf~di~~ft~l~~~~~----~~~~~~~l~~~~~~~~~~i~~---~gG~i~k~~GD~~la~fg~~~~~~~~-~ 114 (226)
+.+.+|||||+||+|||.+++.++ |++++++||.++..|++++.. |||+++|++||++|++||+|....+. +
T Consensus 2 ~~~~~vtvlF~Di~gfT~l~~~~~~~~~~~~~~~~Ln~~~~~fd~~~~~~~~~g~~~~k~iGD~~~a~~g~~~~~~~~~a 81 (199)
T d1azsb_ 2 QSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKTIGSTYMAATGLSAIPSQEHA 81 (199)
T ss_dssp CEEEEEEEEEEECTTHHHHCCCCTTTTTTHHHHHHHHHHHHHHHGGGGSGGGTTEEEEEEETTEEEEEESSSCC------
T ss_pred CCCCcEEEEEEEcCCChHHHHhCCcccCHHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCeEEEEecCCCCcccccc
Confidence 457889999999999999998764 689999999999999999877 89999999999999999998765421 1
Q ss_pred CcchhhhhhccCCCCCCCCCCccCCCCccchHHHHHHHHHHHHHHhhhccCCCCCCCceeEEEeeecceeEEeeecCCCC
Q psy14005 115 GTAISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLVGIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMP 194 (226)
Q Consensus 115 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~i~~~~~~~~~~~~~~~~l~~riGi~~G~v~~g~vG~~~~ 194 (226)
..+. ....++.+++++|+++.+.+.+++.. ...++++|||||+|+|++|++|..++
T Consensus 82 ~~~~----------------------~~~~~~~~av~~a~~~~~~~~~~~~~--~~~~l~~rIGIh~G~v~~Gv~g~~~~ 137 (199)
T d1azsb_ 82 QEPE----------------------RQYMHIGTMVEFAYALVGKLDAINKH--SFNDFKLRVGINHGPVIAGVIGAQKP 137 (199)
T ss_dssp --------------------------CTTHHHHHHHHHHHHHHHHHHHHHHH--HTCCCCCEEEEEEEEEEEEEECSSSC
T ss_pred cchH----------------------HHHHhHHHHHHHHHHHHHHhhhcccc--CCCCeeEEeeeeecCceeeeeccccc
Confidence 1110 11257888999999999998877532 23568999999999999999999888
Q ss_pred ceeEeCcHHHHHHHHhhcCCCCcEEEeccccC
Q psy14005 195 RYCLFGDTINTASRMESAGDLPSFFIVTIVMR 226 (226)
Q Consensus 195 ~~~v~G~~Vn~Aarl~~~a~~g~i~vs~~~~~ 226 (226)
+||+||++||+|+|||+.+++|+|+||++||+
T Consensus 138 ~y~v~Gd~VN~AaRle~~a~~g~I~vS~~t~~ 169 (199)
T d1azsb_ 138 QYDIWGNTVNVASRMDSTGVLDKIQVTEETSL 169 (199)
T ss_dssp EEEEESHHHHHHHHHHHTCCTTEEEEEHHHHH
T ss_pred cccccchHHHHHHHHHhcCCCCeEEECHHHHH
Confidence 99999999999999999999999999999873
No 3
>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis [TaxId: 118562]}
Probab=100.00 E-value=2.7e-34 Score=228.62 Aligned_cols=153 Identities=25% Similarity=0.397 Sum_probs=131.0
Q ss_pred ccCcEEEEEEecCCchhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCcEEEeEeCcEEEEEeCCCCCCCCCCCcchhhhhh
Q psy14005 44 NFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGDAYMVVSGLPQRNGKSPGTAISFYIR 123 (226)
Q Consensus 44 ~~~~vtvlf~di~~ft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~gG~i~k~~GD~~la~fg~~~~~~~~~~~a~~~~~~ 123 (226)
+.|.|||||+||+|||.+++.++++++.+++|.|+..+.+++.+|||.+.|+.||++|++|+.|....+
T Consensus 4 e~r~vtvlF~Di~gfT~l~~~~~~~~~~~~l~~~~~~~~~~i~~~~G~v~k~~GD~~~~~f~~~~~~~~----------- 72 (197)
T d1wc1a_ 4 EPRLITILFSDIVGFTRMSNALQSQGVAELLNEYLGEMTRAVFENQGTVDKFVGDAIMALYGAPEEMSP----------- 72 (197)
T ss_dssp EEEEEEEEEEEETTHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESSSSCCCH-----------
T ss_pred ccEEEEEEEEEeCCHHHHHHhCCHHHHHHHHHHHHHHHHhhHhhhhhhceeeccceEEEEecCCccccc-----------
Confidence 568999999999999999999999999999999999999999999999999999999999999876541
Q ss_pred ccCCCCCCCCCCccCCCCccchHHHHHHHHHHHHHHhhhcc--------CCCCCCCceeEEEeeecceeEEeeecCCCC-
Q psy14005 124 NIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLVGIEHFK--------IPHRPNDKLEIRVGINTGPCVAGVVGTTMP- 194 (226)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~i~~~~~~~~--------~~~~~~~~l~~riGi~~G~v~~g~vG~~~~- 194 (226)
..++..++.++..+.......+ .......++++|||||+|++++|.+|+..+
T Consensus 73 -------------------~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~rIGI~~G~v~~g~iG~~~r~ 133 (197)
T d1wc1a_ 73 -------------------SEQVRRAIATARQMLVALEKLNQGWQERGLVGRNEVPPVRFRCGIHQGMAVVGLFGSQERS 133 (197)
T ss_dssp -------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSSTTCCCCCEEEEEEEEEEEEEEEECSSSE
T ss_pred -------------------hhhhHHHHHHHHHHHHHhhhcccchhcccccccCCCCceEEEEEEEEEEEEeccccccccc
Confidence 2455666666666655543221 122234679999999999999999998766
Q ss_pred ceeEeCcHHHHHHHHhhcCCCCcEEEeccccC
Q psy14005 195 RYCLFGDTINTASRMESAGDLPSFFIVTIVMR 226 (226)
Q Consensus 195 ~~~v~G~~Vn~Aarl~~~a~~g~i~vs~~~~~ 226 (226)
+|++||++||+|+||++.|++|+|+||+++|+
T Consensus 134 ~y~~~G~~Vn~AaRle~~a~~~~Ilise~~~~ 165 (197)
T d1wc1a_ 134 DFTAIGPSVNIAARLQEATAPNSIMVSAMVAQ 165 (197)
T ss_dssp EEEEESHHHHHHHHHHHHSCTTCEEEEHHHHT
T ss_pred cccccccHHHHHHHHHhcCCCCEEEEeHHHHH
Confidence 99999999999999999999999999999875
No 4
>d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase {Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]}
Probab=99.96 E-value=8.6e-30 Score=208.10 Aligned_cols=147 Identities=28% Similarity=0.400 Sum_probs=118.3
Q ss_pred ccCCcccCcEEEEEEecCCchhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCcEEEeEeCcEEEEEeCCCCCCCCCCCcch
Q psy14005 39 QVPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGDAYMVVSGLPQRNGKSPGTAI 118 (226)
Q Consensus 39 ~~~~~~~~~vtvlf~di~~ft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~gG~i~k~~GD~~la~fg~~~~~~~~~~~a~ 118 (226)
..+.++.++|||||+||+|||.+++.. |+++..+|+.|+..+.+++.+|||+++|++||++|++||.|..
T Consensus 4 ~~p~~~~~~vtilF~DI~gfT~l~e~~-p~~~~~~l~~~~~~~~~~i~~~~G~~~k~~GD~~l~~F~~p~~--------- 73 (235)
T d1fx2a_ 4 RAPKEPTDPVTLIFTDIESSTALWAAH-PDLMPDAVAAHHRMVRSLIGRYKCYEVKTVGDSFMIASKSPFA--------- 73 (235)
T ss_dssp GSCCCTTSCEEEEEEEETTHHHHHHHC-TTTHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESCHHH---------
T ss_pred CCCCCCCCCEEEEEEeccChHHHHHhC-HHHHHHHHHHHHHHHHHHHHHcCCEEEEecCCcEEEeeCCCch---------
Confidence 445566789999999999999999865 6789999999999999999999999999999999999966533
Q ss_pred hhhhhccCCCCCCCCCCccCCCCccchHHHHHHHHHHHHHHhhhccCCC---------------------C---------
Q psy14005 119 SFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLVGIEHFKIPH---------------------R--------- 168 (226)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~i~~~~~~~~~~~---------------------~--------- 168 (226)
++.+|+++...+...++.. .
T Consensus 74 ------------------------------a~~~A~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (235)
T d1fx2a_ 74 ------------------------------AVQLAQELQLCFLHHDWGTNALDDSYREFEEQRAEGECEYTPPTAHMDPE 123 (235)
T ss_dssp ------------------------------HHHHHHHHHHHHHHSCCSCSHHHHHHHHHHHHHHHHCSSCCCSSTTSCHH
T ss_pred ------------------------------HHHHHHHHHHHHhhcccchhhhhhhhHHHHHHHHHhhhhhhhhHHHHHHH
Confidence 3333333333322221100 0
Q ss_pred ----CCCceeEEEeeecceeEEeeecCCCCceeEeCcHHHHHHHHhhcCCCCcEEEeccccC
Q psy14005 169 ----PNDKLEIRVGINTGPCVAGVVGTTMPRYCLFGDTINTASRMESAGDLPSFFIVTIVMR 226 (226)
Q Consensus 169 ----~~~~l~~riGi~~G~v~~g~vG~~~~~~~v~G~~Vn~Aarl~~~a~~g~i~vs~~~~~ 226 (226)
....+++|||||+|++++|..|... .|+++|++||+|+||++.|++|+|+||+++|+
T Consensus 124 ~~~~~~~~l~vriGi~~G~v~~g~~g~~~-~~~~~G~~Vn~AaRles~a~~g~IliS~~~~~ 184 (235)
T d1fx2a_ 124 VYSRLWNGLRVRVGIHTGLCDIRHDEVTK-GYDYYGRTPNMAARTESVANGGQVLMTHAAYM 184 (235)
T ss_dssp HHHHHCCSCCEEEEEEEECCEEEECTTSS-SEEEESHHHHHHHHHHHTCCTTCEEEEHHHHH
T ss_pred HhhccCCCceEEEEEEecceEEeccccce-eeeeecHHHHHHHHHHhccCCCeEEECHHHHH
Confidence 0134889999999999999998764 68999999999999999999999999999863
No 5
>d1w25a3 d.58.29.2 (A:294-455) Response regulator PleD, C-terminal domain {Caulobacter crescentus [TaxId: 155892]}
Probab=96.01 E-value=0.023 Score=40.59 Aligned_cols=59 Identities=19% Similarity=0.152 Sum_probs=48.8
Q ss_pred cCcEEEEEEecCCchhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCcEEEeEeCcEEEEEe
Q psy14005 45 FDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGDAYMVVS 104 (226)
Q Consensus 45 ~~~vtvlf~di~~ft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~gG~i~k~~GD~~la~f 104 (226)
....+++++||.+|..+.+..+.+..-.++..+-..+...+..+ ..+.++.||.|.+++
T Consensus 25 ~~~~~l~~i~id~~~~in~~~G~~~~d~ll~~~a~~l~~~~~~~-d~~~R~~~~~F~il~ 83 (162)
T d1w25a3 25 GDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAI-DLPCRYGGEEFVVIM 83 (162)
T ss_dssp SCCCEEEEEEETTHHHHHHHSCHHHHHHHHHHHHHHHHHTSCTT-SEEEECSSSEEEEEE
T ss_pred CCCEEEEEeccccchhccccccccccchhhhhhhhhhhhccCCc-ceeeecCCCeEEEEe
Confidence 46789999999999999988888877777777777777776544 468899999999887
No 6
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.12 E-value=51 Score=20.64 Aligned_cols=29 Identities=14% Similarity=0.125 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHhcC-cEEEeEeCcEEEEEe
Q psy14005 76 TLYKLFDSRIRKYD-VYKVETIGDAYMVVS 104 (226)
Q Consensus 76 ~~~~~~~~~i~~~g-G~i~k~~GD~~la~f 104 (226)
.+...+.+....|| ...++|.+|.+.+.|
T Consensus 36 ~l~~~Llq~l~~~GeViLvRFv~d~mwVTF 65 (95)
T d1ufwa_ 36 DLRTELMQTLGSYGTIVLVRINQGQMLVTF 65 (95)
T ss_dssp HHHHHHHHHHHHHSCCSEEEEETTEEEEEC
T ss_pred HHHHHHHHHHhhCCeEEEEEEeCCeEEEEE
Confidence 33444445555555 788999999999999
No 7
>d1jkea_ c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Escherichia coli [TaxId: 562]}
Probab=19.83 E-value=1.2e+02 Score=20.31 Aligned_cols=96 Identities=14% Similarity=0.159 Sum_probs=53.2
Q ss_pred CcEEEeEeCcEEEEEeCCCCCCCCCCCcchhhhhhc----------------------------cCCCCCCCCCCccCCC
Q psy14005 89 DVYKVETIGDAYMVVSGLPQRNGKSPGTAISFYIRN----------------------------IGSFGGLGTKGFFRPF 140 (226)
Q Consensus 89 gG~i~k~~GD~~la~fg~~~~~~~~~~~a~~~~~~~----------------------------~~~~~~~~~~~~~~~~ 140 (226)
+|.++.-+|-+++++.|....+. ..++...+..+ |--+.....|+-.+.|
T Consensus 16 ~~~~v~~I~~Gll~lvgi~~~D~--~~~~~~~~~Kil~lRiF~d~~gk~~~Sv~d~~geiLiVSQFTL~a~~~KG~rPsF 93 (145)
T d1jkea_ 16 EGEVTGEIGAGLLVLLGVEKDDD--EQKANRLCERVLGYRIFSDAEGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSF 93 (145)
T ss_dssp TTEEEEEESSEEEEEEECBTTCC--HHHHHHHHHHHHHCCCEECTTSCEEECTTTTTCEEEEEECGGGGSBCSSSSSCBC
T ss_pred CCEEEEEeCCceEEEEEEecCCC--hHHHHHHHHHHhheeecccccCCccCCHhHcCCcEEEeeeeeeeeeecCCCCcee
Confidence 57888889999999999976554 22222221111 1122233467777888
Q ss_pred CccchHHHHHHHHHHHHHHhhhccCCCCCC-CceeEEEee-ecceeEE
Q psy14005 141 SGTLHVGEIATMSLDLLVGIEHFKIPHRPN-DKLEIRVGI-NTGPCVA 186 (226)
Q Consensus 141 ~~~~~~~~a~~~al~i~~~~~~~~~~~~~~-~~l~~riGi-~~G~v~~ 186 (226)
........|-..=-.+...+++....-..+ +.-.+.|.+ +-||+++
T Consensus 94 ~~Aa~p~~A~~ly~~f~~~l~~~~~~v~~G~FGA~M~V~l~NDGPvT~ 141 (145)
T d1jkea_ 94 SKGASPDRAEALYDYFVERCRQQEMNTQTGRFAADMQVSLVNDGPVTF 141 (145)
T ss_dssp SSBCCHHHHHHHHHHHHHHHHHTTCCEEECCTTSCEEEEEEEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCCceeCCCCCCcEEEEEEcCCEEE
Confidence 877777776665555555555433211111 223344443 6677664
No 8
>d1xw8a_ c.6.2.5 (A:) Hypothetical protein YbgL {Escherichia coli [TaxId: 562]}
Probab=16.31 E-value=76 Score=23.48 Aligned_cols=44 Identities=14% Similarity=0.027 Sum_probs=32.1
Q ss_pred EEecCCchhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCcEEEeE
Q psy14005 52 FSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVET 95 (226)
Q Consensus 52 f~di~~ft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~gG~i~k~ 95 (226)
|-|..||-+-.-..+++++...+..-...+..++..+|+.+...
T Consensus 60 ypD~~gFGRr~~~~s~~el~~~v~~Qi~al~~~~~~~g~~l~hv 103 (247)
T d1xw8a_ 60 FPDRENFGRSAMQLPPETVYAQTLYQIGALATIARAQGGVMRHV 103 (247)
T ss_dssp CC-------CCCCCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCchhccCcccCCCCHHHHHHHHHHHHHHHHHHHHHcCCeeeee
Confidence 77999999999999999999999999999999999998754433
No 9
>d2qn6b1 d.58.51.1 (B:176-264) eIF-2-alpha, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=14.50 E-value=1.2e+02 Score=18.32 Aligned_cols=29 Identities=17% Similarity=0.139 Sum_probs=26.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCcEE
Q psy14005 64 DSSPMEVVNMLNTLYKLFDSRIRKYDVYK 92 (226)
Q Consensus 64 ~~~~~~~~~~l~~~~~~~~~~i~~~gG~i 92 (226)
..+.+.....|+.....+.+.++++||..
T Consensus 58 a~D~k~ae~~l~~a~~~i~~~ik~~gg~~ 86 (89)
T d2qn6b1 58 GTNPKEASEALNQIISNLIKIGKEENVDI 86 (89)
T ss_dssp ESCHHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred eCCHHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 45789999999999999999999999975
No 10
>d1djqa1 c.1.4.1 (A:1-340) Trimethylamine dehydrogenase, N-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=13.88 E-value=2.4e+02 Score=21.07 Aligned_cols=89 Identities=11% Similarity=0.061 Sum_probs=53.9
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHh-cCcEEEeEeCcEEEEEeCCCCCCC-CCCCcchhhhhhccCCCCCCCCCCccCC
Q psy14005 62 SADSSPMEVVNMLNTLYKLFDSRIRK-YDVYKVETIGDAYMVVSGLPQRNG-KSPGTAISFYIRNIGSFGGLGTKGFFRP 139 (226)
Q Consensus 62 ~~~~~~~~~~~~l~~~~~~~~~~i~~-~gG~i~k~~GD~~la~fg~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 139 (226)
...++.+++..+++.|......+.+. ++|.-+.....-++.-|--|..+. .|...
T Consensus 136 ~~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~ahGyLl~qFls~~~N~R~D~yG----------------------- 192 (340)
T d1djqa1 136 CKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYG----------------------- 192 (340)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTS-----------------------
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHHhccceeeeeccccchhhhhhhhcccccccccc-----------------------
Confidence 34557889999999999887666654 556655444333333343333332 11111
Q ss_pred CCccchHHHHHHHHHHHHHHhhhccCCCCCCCceeEEEeee
Q psy14005 140 FSGTLHVGEIATMSLDLLVGIEHFKIPHRPNDKLEIRVGIN 180 (226)
Q Consensus 140 ~~~~~~~~~a~~~al~i~~~~~~~~~~~~~~~~l~~riGi~ 180 (226)
....+=+++.+++++.+++.. ....++.+|++.+
T Consensus 193 ----Gs~enR~Rf~~EIi~aIr~~v---g~~~~i~~R~s~~ 226 (340)
T d1djqa1 193 ----GSLENRARFWLETLEKVKHAV---GSDCAIATRFGVD 226 (340)
T ss_dssp ----SSHHHHHHHHHHHHHHHHHHH---TTTSEEEEEEEEE
T ss_pred ----ccHHhhhHHHHHHHHHHHHHH---hhhhhceeecccc
Confidence 345667889999999888653 2234577777654
Done!