RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy14005
         (226 letters)



>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat
           (Rattus norvegicus) [TaxId: 10116]}
          Length = 199

 Score =  107 bits (267), Expect = 1e-29
 Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 30/178 (16%)

Query: 43  ENFDSVTIYFSDIVGFTNISADSS----PMEVVNMLNTLYKLFDSRIRK---YDVYKVET 95
           +++D V + F+ I  F     +S      +E + +LN +   FD  + K     V K++T
Sbjct: 2   QSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKT 61

Query: 96  IGDAYMVVSGLPQRNGKSPGTAISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLD 155
           IG  YM  +GL     +                          P    +H+G +   +  
Sbjct: 62  IGSTYMAATGLSAIPSQEH---------------------AQEPERQYMHIGTMVEFAYA 100

Query: 156 LLVGIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRYCLFGDTINTASRMESAG 213
           L+  ++         +  ++RVGIN GP +AGV+G   P+Y ++G+T+N ASRM+S G
Sbjct: 101 LVGKLDAI--NKHSFNDFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTG 156


>d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase
           {Trypanosome (Trypanosoma brucei), different isoform
           [TaxId: 5691]}
          Length = 235

 Score =  106 bits (265), Expect = 7e-29
 Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 7/176 (3%)

Query: 39  QVPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGD 98
           + P E  D VT+ F+DI   T + A + P  + + +   +++  S I +Y  Y+V+T+GD
Sbjct: 4   RAPKEPTDPVTLIFTDIESSTALWA-AHPDLMPDAVAAHHRMVRSLIGRYKCYEVKTVGD 62

Query: 99  AYMVVSGLPQRNGKSPGTAISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLV 158
           ++M+ S  P    +        ++ +        T      +                  
Sbjct: 63  SFMIASKSPFAAVQLAQELQLCFLHHDWG-----TNALDDSYREFEEQRAEGECEYTPPT 117

Query: 159 GIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRYCLFGDTINTASRMESAGD 214
                ++  R  + L +RVGI+TG C       T   Y  +G T N A+R ES  +
Sbjct: 118 AHMDPEVYSRLWNGLRVRVGIHTGLCDIRHDEVTKG-YDYYGRTPNMAARTESVAN 172


>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis
           [TaxId: 118562]}
          Length = 197

 Score = 81.6 bits (200), Expect = 8e-20
 Identities = 34/167 (20%), Positives = 56/167 (33%), Gaps = 23/167 (13%)

Query: 48  VTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGDAYMVVSGLP 107
           +TI FSDIVGFT +S       V  +LN         + +      + +GDA M + G P
Sbjct: 8   ITILFSDIVGFTRMSNALQSQGVAELLNEYLGEMTRAVFENQGTVDKFVGDAIMALYGAP 67

Query: 108 QRNGKSPGTAISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLVGIEHFKIPH 167
           +    S     +                             +  +        E   +  
Sbjct: 68  EEMSPSEQVRRAIAT----------------------ARQMLVALEKLNQGWQERGLVGR 105

Query: 168 RPNDKLEIRVGINTGPCVAGVVG-TTMPRYCLFGDTINTASRMESAG 213
                +  R GI+ G  V G+ G      +   G ++N A+R++ A 
Sbjct: 106 NEVPPVRFRCGIHQGMAVVGLFGSQERSDFTAIGPSVNIAARLQEAT 152


>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis
           familiaris) [TaxId: 9615]}
          Length = 190

 Score = 78.8 bits (193), Expect = 8e-19
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 34/175 (19%)

Query: 39  QVPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGD 98
           ++  +  D+V+I F+DI GFT++++  +  E+V  LN L+  FD    +    +++ +GD
Sbjct: 6   KIYIQKHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAAENHCLRIKILGD 65

Query: 99  AYMVVSGLPQRNGKSPGTAISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLV 158
            Y  VSGLP+                                    H      M +D++ 
Sbjct: 66  CYYCVSGLPEARAD--------------------------------HAHCCVEMGMDMIE 93

Query: 159 GIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRYCLFGDTINTASRMESAG 213
            I   +     N    +RVGI++G    GV+G    ++ ++ + +  A+ ME+ G
Sbjct: 94  AISLVREMTGVNV--NMRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGG 146


>d1qxoa_ d.258.1.1 (A:) Chorismate synthase, AroC {Streptococcus
           pneumoniae [TaxId: 1313]}
          Length = 388

 Score = 27.3 bits (60), Expect = 1.8
 Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 98  DAYMVVSGLPQRNGKSPGTAISFYIRN 124
           D  +  SG+  R+GK+ G  I+  + N
Sbjct: 54  DQVVFTSGV--RHGKTTGAPITMDVIN 78


>d1q1la_ d.258.1.1 (A:) Chorismate synthase, AroC {Aquifex aeolicus
           [TaxId: 63363]}
          Length = 397

 Score = 26.5 bits (58), Expect = 2.6
 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 2/27 (7%)

Query: 98  DAYMVVSGLPQRNGKSPGTAISFYIRN 124
           D   ++SG+  R GK+ G+ I+ +IRN
Sbjct: 58  DTAEILSGV--RFGKTLGSPIALFIRN 82


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.140    0.412 

Gapped
Lambda     K      H
   0.267   0.0352    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 859,870
Number of extensions: 39962
Number of successful extensions: 90
Number of sequences better than 10.0: 1
Number of HSP's gapped: 84
Number of HSP's successfully gapped: 10
Length of query: 226
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 144
Effective length of database: 1,281,736
Effective search space: 184569984
Effective search space used: 184569984
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.5 bits)