Query psy14007
Match_columns 198
No_of_seqs 163 out of 2051
Neff 11.4
Searched_HMMs 29240
Date Fri Aug 16 17:10:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14007.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14007hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2f8y_A Notch homolog 1, transl 100.0 5.4E-44 1.9E-48 248.5 20.3 196 1-198 24-220 (223)
2 3aji_A 26S proteasome non-ATPa 100.0 6.4E-44 2.2E-48 249.4 20.6 193 1-195 39-231 (231)
3 1yyh_A HN1;, notch 1, ankyrin 100.0 2.7E-44 9.3E-49 254.6 18.0 195 1-197 56-251 (253)
4 1oy3_D Transcription factor in 100.0 2.1E-44 7.1E-49 258.6 17.6 195 1-197 8-253 (282)
5 3b7b_A Euchromatic histone-lys 100.0 4.1E-43 1.4E-47 246.2 20.2 194 1-196 10-204 (237)
6 2xai_A ASB-9, ankyrin repeat a 100.0 1.9E-43 6.3E-48 251.4 18.4 192 1-196 2-193 (261)
7 1k1a_A B-cell lymphoma 3-encod 100.0 1.3E-42 4.5E-47 244.1 22.1 189 2-192 46-239 (241)
8 4b93_B Ankyrin repeat domain-c 100.0 2.9E-43 1E-47 251.1 18.1 191 2-194 52-244 (269)
9 2rfa_A Transient receptor pote 100.0 2.7E-43 9.2E-48 246.4 16.6 194 1-196 2-224 (232)
10 1k1a_A B-cell lymphoma 3-encod 100.0 1.2E-42 4E-47 244.3 19.8 194 1-196 8-210 (241)
11 1yyh_A HN1;, notch 1, ankyrin 100.0 2.4E-43 8.1E-48 249.8 14.8 194 1-196 9-217 (253)
12 1ikn_D Protein (I-kappa-B-alph 100.0 1.4E-43 4.8E-48 248.5 13.4 193 1-195 7-210 (236)
13 3d9h_A CDNA FLJ77766, highly s 100.0 2.3E-42 7.9E-47 248.7 18.1 190 2-196 59-281 (285)
14 3b7b_A Euchromatic histone-lys 100.0 6.9E-42 2.4E-46 239.9 20.1 190 1-192 43-233 (237)
15 3hra_A Ankyrin repeat family p 100.0 6.3E-42 2.1E-46 234.6 19.0 190 2-192 5-201 (201)
16 2dzn_A Probable 26S proteasome 100.0 4.4E-42 1.5E-46 239.6 17.7 182 2-184 36-223 (228)
17 4gpm_A Engineered protein OR26 100.0 2E-41 6.7E-46 225.6 19.9 160 4-165 6-165 (169)
18 2dzn_A Probable 26S proteasome 100.0 3.1E-41 1E-45 235.3 21.8 193 2-196 2-202 (228)
19 3d9h_A CDNA FLJ77766, highly s 100.0 2.2E-41 7.5E-46 243.6 21.0 157 2-164 125-282 (285)
20 2xai_A ASB-9, ankyrin repeat a 100.0 4.6E-41 1.6E-45 239.1 21.8 187 1-193 35-221 (261)
21 3utm_A Tankyrase-1; tankyrase, 100.0 1.4E-41 4.9E-46 250.5 19.8 194 1-196 57-307 (351)
22 3aji_A 26S proteasome non-ATPa 100.0 2.1E-41 7.3E-46 236.6 17.9 193 2-196 6-199 (231)
23 3ljn_A Hypothetical protein; a 100.0 3.5E-42 1.2E-46 255.6 14.7 193 1-193 19-268 (364)
24 1s70_B 130 kDa myosin-binding 100.0 9E-41 3.1E-45 241.7 21.3 188 1-191 39-286 (299)
25 2fo1_E LIN-12 protein; beta-ba 100.0 1.9E-41 6.7E-46 252.3 17.9 193 1-194 165-371 (373)
26 3kea_A K1L; tropism, ANK repea 100.0 1.9E-42 6.3E-47 249.1 11.6 191 1-197 30-223 (285)
27 1oy3_D Transcription factor in 100.0 5.9E-41 2E-45 240.6 18.7 180 1-182 44-271 (282)
28 1wdy_A 2-5A-dependent ribonucl 100.0 1.1E-40 3.6E-45 239.4 19.6 193 2-196 39-280 (285)
29 2etb_A Transient receptor pote 100.0 1.6E-42 5.4E-47 245.9 9.7 193 2-194 2-246 (256)
30 1wdy_A 2-5A-dependent ribonucl 100.0 3.3E-40 1.1E-44 236.8 20.2 193 1-195 4-212 (285)
31 1n11_A Ankyrin; clathrin, BAND 100.0 1.7E-40 6E-45 251.8 19.6 194 1-196 13-206 (437)
32 4b93_B Ankyrin repeat domain-c 100.0 5E-41 1.7E-45 239.6 14.0 193 2-196 11-212 (269)
33 1n11_A Ankyrin; clathrin, BAND 100.0 4.9E-40 1.7E-44 249.3 19.1 185 3-189 213-397 (437)
34 3eu9_A Huntingtin-interacting 100.0 6.9E-40 2.3E-44 229.8 17.6 191 2-194 42-235 (240)
35 2fo1_E LIN-12 protein; beta-ba 100.0 1.2E-40 4E-45 248.1 12.2 194 1-196 124-340 (373)
36 2pnn_A Transient receptor pote 100.0 1.2E-40 4E-45 238.4 10.1 194 1-194 12-258 (273)
37 3eu9_A Huntingtin-interacting 100.0 7.3E-39 2.5E-43 224.6 18.9 193 2-196 9-204 (240)
38 4g8k_A 2-5A-dependent ribonucl 100.0 2.5E-39 8.4E-44 238.0 17.2 195 2-196 25-300 (337)
39 3utm_A Tankyrase-1; tankyrase, 100.0 1.9E-38 6.5E-43 233.9 21.8 175 1-177 90-321 (351)
40 4gpm_A Engineered protein OR26 100.0 2.5E-39 8.6E-44 215.4 14.8 157 37-195 6-162 (169)
41 3v30_A DNA-binding protein rfx 100.0 7.1E-39 2.4E-43 214.4 16.2 170 1-172 1-171 (172)
42 3jxi_A Vanilloid receptor-rela 100.0 1.6E-40 5.3E-45 236.1 7.1 194 2-195 5-251 (260)
43 3kea_A K1L; tropism, ANK repea 100.0 3.3E-39 1.1E-43 232.2 12.3 187 1-197 61-249 (285)
44 1ikn_D Protein (I-kappa-B-alph 100.0 2.2E-38 7.6E-43 222.1 15.8 179 1-181 44-231 (236)
45 2f8y_A Notch homolog 1, transl 100.0 6.3E-39 2.2E-43 222.9 12.7 182 13-196 2-185 (223)
46 3v31_A Ankyrin repeat family A 100.0 1.2E-37 4.2E-42 207.4 16.8 160 1-162 2-161 (167)
47 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.6E-37 5.4E-42 205.8 17.2 157 2-161 5-162 (162)
48 2y1l_E Darpin-8.4; hydrolase-i 100.0 4.6E-37 1.6E-41 205.1 19.4 156 2-159 14-169 (169)
49 4hbd_A KN motif and ankyrin re 100.0 6.5E-39 2.2E-43 229.6 10.9 190 2-193 76-274 (276)
50 1sw6_A Regulatory protein SWI6 100.0 4.4E-38 1.5E-42 230.4 14.1 169 2-180 131-327 (327)
51 2rfm_A Putative ankyrin repeat 100.0 2E-37 6.8E-42 210.9 15.9 163 28-192 28-190 (192)
52 4g8k_A 2-5A-dependent ribonucl 100.0 3.7E-37 1.3E-41 226.3 17.7 190 1-196 124-328 (337)
53 3ljn_A Hypothetical protein; a 100.0 1.2E-37 4.1E-42 231.2 13.9 189 2-192 84-312 (364)
54 3hra_A Ankyrin repeat family p 100.0 8.7E-36 3E-40 204.0 19.6 157 1-159 38-201 (201)
55 2rfm_A Putative ankyrin repeat 100.0 6.2E-37 2.1E-41 208.4 13.5 157 1-159 34-190 (192)
56 3f6q_A Integrin-linked protein 100.0 3.1E-36 1E-40 202.8 16.6 166 2-169 5-171 (179)
57 1awc_B Protein (GA binding pro 100.0 8.3E-36 2.8E-40 195.9 18.1 152 1-155 1-152 (153)
58 2rfa_A Transient receptor pote 100.0 5.3E-36 1.8E-40 209.4 16.5 164 1-166 36-227 (232)
59 2pnn_A Transient receptor pote 100.0 2E-36 6.9E-41 216.4 13.9 172 1-174 53-272 (273)
60 3v31_A Ankyrin repeat family A 100.0 1.5E-36 5.1E-41 202.2 12.3 161 34-196 2-162 (167)
61 2vge_A RELA-associated inhibit 100.0 4.6E-39 1.6E-43 224.5 -1.0 182 1-187 20-206 (229)
62 3twr_A Tankyrase-2; ankyrin re 100.0 8.6E-36 3E-40 198.1 14.6 154 35-191 8-162 (165)
63 2y1l_E Darpin-8.4; hydrolase-i 100.0 6.4E-36 2.2E-40 199.5 13.7 159 32-192 11-169 (169)
64 1bd8_A P19INK4D CDK4/6 inhibit 100.0 7.7E-35 2.6E-39 191.8 17.3 153 2-158 2-155 (156)
65 3f6q_A Integrin-linked protein 100.0 9E-35 3.1E-39 195.6 17.7 163 33-197 3-166 (179)
66 2etb_A Transient receptor pote 100.0 1.1E-35 3.7E-40 210.7 13.2 161 1-163 42-248 (256)
67 1ihb_A P18-INK4C(INK6), cyclin 100.0 1E-35 3.5E-40 197.1 11.6 158 34-194 4-162 (162)
68 4hbd_A KN motif and ankyrin re 100.0 7.4E-35 2.5E-39 208.6 16.7 157 1-159 110-273 (276)
69 1ycs_B 53BP2, P53BP2; ankyrin 100.0 4.5E-36 1.5E-40 210.8 10.1 178 1-181 4-193 (239)
70 3twr_A Tankyrase-2; ankyrin re 100.0 1E-34 3.5E-39 192.9 15.3 156 2-160 8-164 (165)
71 3v30_A DNA-binding protein rfx 100.0 2.2E-35 7.6E-40 197.4 12.1 160 35-196 2-162 (172)
72 1awc_B Protein (GA binding pro 100.0 5.2E-35 1.8E-39 192.0 13.0 152 35-189 2-153 (153)
73 3jxi_A Vanilloid receptor-rela 100.0 7.1E-35 2.4E-39 207.0 13.5 161 1-163 45-252 (260)
74 1s70_B 130 kDa myosin-binding 100.0 1.2E-34 4.1E-39 209.6 14.5 187 8-196 4-259 (299)
75 1sw6_A Regulatory protein SWI6 100.0 4.9E-35 1.7E-39 214.2 7.9 183 6-196 101-310 (327)
76 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.6E-33 5.4E-38 185.4 12.1 153 35-191 2-155 (156)
77 1d9s_A Cyclin-dependent kinase 100.0 2E-32 6.9E-37 176.3 13.4 134 25-161 2-136 (136)
78 1bi7_B P16INK4A, MTS1, multipl 100.0 1.1E-32 3.9E-37 181.4 11.3 146 29-177 6-152 (156)
79 3t8k_A Uncharacterized protein 100.0 4.9E-33 1.7E-37 187.9 7.3 161 2-166 6-184 (186)
80 1ycs_B 53BP2, P53BP2; ankyrin 100.0 8.5E-33 2.9E-37 194.1 8.3 161 32-195 2-165 (239)
81 1bi7_B P16INK4A, MTS1, multipl 100.0 5.2E-32 1.8E-36 178.3 10.9 140 1-143 11-151 (156)
82 2vge_A RELA-associated inhibit 100.0 5.7E-32 2E-36 188.6 9.8 162 18-181 1-168 (229)
83 2jab_A H10-2-G3; HER2, darpin, 100.0 1.9E-30 6.6E-35 167.0 15.0 121 2-122 14-134 (136)
84 1n0r_A 4ANK, 4 ankyrin repeats 100.0 2.5E-30 8.5E-35 164.1 15.3 123 1-123 1-123 (126)
85 1d9s_A Cyclin-dependent kinase 100.0 5E-31 1.7E-35 169.7 11.4 123 1-124 11-134 (136)
86 1n0r_A 4ANK, 4 ankyrin repeats 100.0 5.8E-30 2E-34 162.3 15.5 126 34-161 1-126 (126)
87 3c5r_A BARD-1, BRCA1-associate 100.0 6E-30 2.1E-34 164.8 13.5 135 59-196 2-136 (137)
88 3ui2_A Signal recognition part 100.0 2.6E-30 8.9E-35 181.9 11.2 141 1-161 44-185 (244)
89 2jab_A H10-2-G3; HER2, darpin, 100.0 1.1E-29 3.8E-34 163.4 13.1 127 31-159 10-136 (136)
90 3deo_A Signal recognition part 100.0 9.4E-30 3.2E-34 171.7 12.5 137 2-158 44-181 (183)
91 3t8k_A Uncharacterized protein 100.0 1.5E-31 5.1E-36 180.6 3.3 156 35-194 6-179 (186)
92 2aja_A Ankyrin repeat family p 100.0 7.5E-33 2.6E-37 205.2 -4.7 169 1-183 91-268 (376)
93 3c5r_A BARD-1, BRCA1-associate 100.0 1.3E-29 4.3E-34 163.3 8.3 132 25-159 1-132 (137)
94 3aaa_C Myotrophin, protein V-1 100.0 1.4E-28 4.8E-33 155.6 10.5 108 2-109 7-114 (123)
95 3deo_A Signal recognition part 100.0 1.9E-30 6.5E-35 175.1 1.5 140 32-191 41-181 (183)
96 2b0o_E UPLC1; arfgap, structur 100.0 2.4E-28 8.4E-33 176.6 11.9 143 32-182 148-299 (301)
97 2b0o_E UPLC1; arfgap, structur 100.0 7.4E-28 2.5E-32 174.0 13.1 137 4-148 153-298 (301)
98 3aaa_C Myotrophin, protein V-1 100.0 1.1E-27 3.8E-32 151.4 12.1 120 65-186 4-123 (123)
99 3ehr_A Osteoclast-stimulating 100.0 2.4E-28 8.1E-33 169.6 9.5 135 32-168 70-205 (222)
100 2aja_A Ankyrin repeat family p 100.0 5.5E-31 1.9E-35 195.2 -4.5 174 4-194 67-250 (376)
101 3ehr_A Osteoclast-stimulating 100.0 2.6E-28 8.9E-33 169.4 8.5 128 65-193 70-197 (222)
102 3jue_A Arfgap with coiled-coil 99.9 1.3E-26 4.3E-31 171.3 14.2 120 4-123 201-323 (368)
103 3ui2_A Signal recognition part 99.9 2.5E-27 8.6E-32 166.7 9.7 139 33-191 43-182 (244)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.1E-26 7.3E-31 138.4 11.9 93 1-93 1-93 (93)
105 1dcq_A PYK2-associated protein 99.9 5.9E-25 2E-29 157.3 19.0 132 37-178 132-272 (278)
106 3lvq_E ARF-GAP with SH3 domain 99.9 1.6E-25 5.3E-30 172.3 14.7 129 36-166 133-270 (497)
107 3lvq_E ARF-GAP with SH3 domain 99.9 2.4E-25 8.3E-30 171.2 15.1 134 4-145 134-276 (497)
108 3jue_A Arfgap with coiled-coil 99.9 1.3E-25 4.3E-30 166.0 12.4 145 34-180 198-348 (368)
109 1dcq_A PYK2-associated protein 99.9 8.4E-25 2.9E-29 156.4 15.0 122 4-125 132-262 (278)
110 2l6b_A NR1C; ankyrin, consensu 99.9 1.7E-25 5.7E-30 139.7 8.2 107 31-139 5-111 (115)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.9 7.2E-24 2.5E-28 127.3 11.5 89 35-123 2-90 (93)
112 2l6b_A NR1C; ankyrin, consensu 99.9 1.6E-24 5.5E-29 135.2 8.7 110 63-174 4-113 (115)
113 2zgd_A 3 repeat synthetic anky 99.9 3.7E-22 1.3E-26 123.5 10.7 86 2-87 24-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 6.3E-21 2.2E-25 117.9 9.5 92 29-120 18-109 (110)
115 4g26_A Pentatricopeptide repea 78.3 1.1 3.6E-05 34.7 2.2 142 6-156 33-198 (501)
116 1gp8_A Protein (scaffolding pr 59.9 8.2 0.00028 18.0 2.1 18 39-56 17-34 (40)
117 4g26_A Pentatricopeptide repea 56.0 19 0.00064 27.7 5.0 102 15-122 90-199 (501)
118 3zrh_A Ubiquitin thioesterase 53.5 66 0.0022 24.3 7.0 49 8-56 28-90 (454)
119 3zrh_A Ubiquitin thioesterase 39.1 1E+02 0.0035 23.3 6.2 48 42-89 29-90 (454)
No 1
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=5.4e-44 Score=248.51 Aligned_cols=196 Identities=26% Similarity=0.315 Sum_probs=188.0
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCC-CccccCCCCCcHHHHHHhcC
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGA-DVNAKADGGHSALQYACSKG 79 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~-~~~~~~~~~~t~l~~a~~~~ 79 (198)
+|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.+. +++..+..|.||||+|+..+
T Consensus 24 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 103 (223)
T 2f8y_A 24 TGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA 103 (223)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHT
T ss_pred CCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhC
Confidence 58999999999999999999999999999999999999999999999999999999987 78888999999999999999
Q ss_pred hHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcC
Q psy14007 80 WKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCG 159 (198)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 159 (198)
+.+++++|++.|++++..+..|.||||+|+..++.+++++|+++ +.+++..+..|.||||+|+..++.+++++|+++|
T Consensus 104 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 181 (223)
T 2f8y_A 104 VEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN--GANKDMQNNREETPLFLAAREGSYETAKVLLDHF 181 (223)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred cHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999998 6688899999999999999999999999999999
Q ss_pred CCcceecCCCCCccccCCChhHHHHHhhhcccccCCCCC
Q psy14007 160 ARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGDLPED 198 (198)
Q Consensus 160 ~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~~~~~ 198 (198)
++++.++..|.||+++|+..++.+++++|.+++...+++
T Consensus 182 a~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~~~ 220 (223)
T 2f8y_A 182 ANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSPQ 220 (223)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSCC-
T ss_pred CCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcccc
Confidence 999999999999999999999999999999999887653
No 2
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=6.4e-44 Score=249.40 Aligned_cols=193 Identities=41% Similarity=0.599 Sum_probs=184.3
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
+|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||.|+..++
T Consensus 39 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 118 (231)
T 3aji_A 39 DSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNR 118 (231)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCC
Q psy14007 81 KEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGA 160 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~ 160 (198)
.+++++|++.|++++..+..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..++.+++++|+++|+
T Consensus 119 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 196 (231)
T 3aji_A 119 HEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFY--KASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGA 196 (231)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc--CCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCC
Confidence 9999999999999999999999999999999999999999998 66888899999999999999999999999999999
Q ss_pred CcceecCCCCCccccCCChhHHHHHhhhcccccCC
Q psy14007 161 RLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGDL 195 (198)
Q Consensus 161 ~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~~ 195 (198)
+++.+|..|.||+++|...+..++++.|...++++
T Consensus 197 ~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~i 231 (231)
T 3aji_A 197 SIYIENKEEKTPLQVAKGGLGLILKRLAEGEEASM 231 (231)
T ss_dssp CSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCCCCHHHHHHhhHHHHHHHHHccccccC
Confidence 99999999999999999999999999998877653
No 3
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.7e-44 Score=254.64 Aligned_cols=195 Identities=26% Similarity=0.320 Sum_probs=182.8
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCC-CccccCCCCCcHHHHHHhcC
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGA-DVNAKADGGHSALQYACSKG 79 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~-~~~~~~~~~~t~l~~a~~~~ 79 (198)
+|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++++. +++.++..|.||||+|+..+
T Consensus 56 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 135 (253)
T 1yyh_A 56 TGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA 135 (253)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcC
Confidence 48999999999999999999999999999999999999999999999999999999987 88889999999999999999
Q ss_pred hHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcC
Q psy14007 80 WKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCG 159 (198)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 159 (198)
+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++ |.+++..+..|.||||+|+..++.+++++|+++|
T Consensus 136 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 213 (253)
T 1yyh_A 136 VEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN--GANKDMQNNREETPLFLAAREGSYETAKVLLDHF 213 (253)
T ss_dssp CSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred hHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999998 6688899999999999999999999999999999
Q ss_pred CCcceecCCCCCccccCCChhHHHHHhhhcccccCCCC
Q psy14007 160 ARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGDLPE 197 (198)
Q Consensus 160 ~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~~~~ 197 (198)
++++.+|..|.||+++|+..++.++++++.....+.++
T Consensus 214 a~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~~~~~ 251 (253)
T 1yyh_A 214 ANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHHHH 251 (253)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC-------
T ss_pred CCccccccCCCCHHHHHHHcCCHHHHHHHHHHhhhccc
Confidence 99999999999999999999999999999988877664
No 4
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2.1e-44 Score=258.59 Aligned_cols=195 Identities=29% Similarity=0.384 Sum_probs=183.5
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHh
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSP---VDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACS 77 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~---~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~ 77 (198)
+|+||||+|+..|+.+++++|++.|.+ ++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~ 87 (282)
T 1oy3_D 8 DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACR 87 (282)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 589999999999999999999999987 78889999999999999999999999999999999999999999999999
Q ss_pred cChHHHHHHHHhcCCC-----------------------------------------------CCcCCCCCCcHHHHHHh
Q psy14007 78 KGWKEIAELLIHNHAN-----------------------------------------------VNIQDVRGATPLHRAAS 110 (198)
Q Consensus 78 ~~~~~~~~~l~~~~~~-----------------------------------------------~~~~~~~~~~~l~~a~~ 110 (198)
.++.+++++|++.++. ++..+..|.||||+|+.
T Consensus 88 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 167 (282)
T 1oy3_D 88 VRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVI 167 (282)
T ss_dssp TTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHH
T ss_pred cCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHH
Confidence 9999999999998765 56677889999999999
Q ss_pred cCChHHHHHHHhccCCCCcccCCCC-CCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhc
Q psy14007 111 QGITPVVKLLLTQRLDIDVNITDAY-GNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIE 189 (198)
Q Consensus 111 ~~~~~~~~~l~~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~ 189 (198)
.|+.+++++|+++ +.+++..+.. |.||||+|+..|+.+++++|+++|++++.++..|.||+|+|+..++.++++.|.
T Consensus 168 ~g~~~~v~~Ll~~--g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 245 (282)
T 1oy3_D 168 HKDAEMVRLLRDA--GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLR 245 (282)
T ss_dssp TTCHHHHHHHHHH--TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHH
T ss_pred cCCHHHHHHHHHc--CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHH
Confidence 9999999999998 5677777754 999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCC
Q psy14007 190 PIVGDLPE 197 (198)
Q Consensus 190 ~~~~~~~~ 197 (198)
+.+++++.
T Consensus 246 ~~ga~~~~ 253 (282)
T 1oy3_D 246 AHGAPEPE 253 (282)
T ss_dssp HTTCCCCC
T ss_pred HcCCCcCc
Confidence 99998763
No 5
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=4.1e-43 Score=246.17 Aligned_cols=194 Identities=31% Similarity=0.403 Sum_probs=163.3
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
+|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||.|+..++
T Consensus 10 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 89 (237)
T 3b7b_A 10 NKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGH 89 (237)
T ss_dssp CSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Confidence 57888888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHhcC-CCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcC
Q psy14007 81 KEIAELLIHNH-ANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCG 159 (198)
Q Consensus 81 ~~~~~~l~~~~-~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 159 (198)
.+++++|++.+ .+++..+..|.||+|+|+..++.+++++|+++ +.+++..+..|.||||.|+..|+.+++++|+++|
T Consensus 90 ~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 167 (237)
T 3b7b_A 90 YEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK--GSDINIRDNEENICLHWAAFSGCVDIAEILLAAK 167 (237)
T ss_dssp HHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTT
T ss_pred HHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 88888888887 67777788888888888888888888888887 5567777788888888888888888888888888
Q ss_pred CCcceecCCCCCccccCCChhHHHHHhhhcccccCCC
Q psy14007 160 ARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGDLP 196 (198)
Q Consensus 160 ~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~~~ 196 (198)
++++.++..|.||+|+|+..++.++++.|.+.+.++.
T Consensus 168 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 204 (237)
T 3b7b_A 168 CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVT 204 (237)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT
T ss_pred CCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCC
Confidence 8888888888888888888888888888888777664
No 6
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.9e-43 Score=251.44 Aligned_cols=192 Identities=25% Similarity=0.332 Sum_probs=154.6
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
+|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 58888888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCC
Q psy14007 81 KEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGA 160 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~ 160 (198)
.+++++|+++|++++. +..|.||+|+|+..|+.+++++|++. +.+++..+..|.||||+|+..++.+++++|+++|+
T Consensus 82 ~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 158 (261)
T 2xai_A 82 WDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAY--GGNIDHKISHLGTPLYLACENQQRACVKKLLESGA 158 (261)
T ss_dssp HHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHc--CCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCC
Confidence 8888888888887764 34477888888888888888888877 45667777777788888888888888888888887
Q ss_pred CcceecCCCCCccccCCChhHHHHHhhhcccccCCC
Q psy14007 161 RLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGDLP 196 (198)
Q Consensus 161 ~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~~~ 196 (198)
+++. +..|.||+|+|+..++.++++.|.+.+.++.
T Consensus 159 ~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~ 193 (261)
T 2xai_A 159 DVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQ 193 (261)
T ss_dssp CTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 7774 6777788888888888888888777777654
No 7
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.3e-42 Score=244.06 Aligned_cols=189 Identities=25% Similarity=0.321 Sum_probs=126.4
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCC----CccccCCCCCcHHHHHHh
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGA----DVNAKADGGHSALQYACS 77 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~----~~~~~~~~~~t~l~~a~~ 77 (198)
|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.+. +++..+..|.||||.|+.
T Consensus 46 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~ 125 (241)
T 1k1a_A 46 RQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVN 125 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHH
Confidence 5566666666666666666666666666666666666666666666666666666654 555556666666666666
Q ss_pred cChHHHHHHHHhcCCCCCcCC-CCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHH
Q psy14007 78 KGWKEIAELLIHNHANVNIQD-VRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLV 156 (198)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 156 (198)
.++.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|+++ +.+++..+..|.||||+|+..++.+++++|+
T Consensus 126 ~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 203 (241)
T 1k1a_A 126 TECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQH--GANVNAQMYSGSSALHSASGRGLLPLVRTLV 203 (241)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 666666666666666666666 5677777777777777777777766 4566666777777777777777777777777
Q ss_pred HcCCCcceecCCCCCccccCCChhHHHHHhhhcccc
Q psy14007 157 RCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIV 192 (198)
Q Consensus 157 ~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~ 192 (198)
++|++++.+|..|.||+++|+..+..++++.+.+..
T Consensus 204 ~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~ 239 (241)
T 1k1a_A 204 RSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRP 239 (241)
T ss_dssp HTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC-----
T ss_pred hcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCC
Confidence 777777777777777777777777777777766543
No 8
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-43 Score=251.11 Aligned_cols=191 Identities=26% Similarity=0.359 Sum_probs=155.9
Q ss_pred cchhHHHHHhcCcH-HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 2 ERLLIHWAALSGRE-DVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 2 g~~~L~~A~~~g~~-~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
|.+||++|+..+.. .++++|++.|++++..+..|.||||+|+..|+.+++++|++.+++++.++..|.||++.|+..++
T Consensus 52 ~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~ 131 (269)
T 4b93_B 52 FCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGH 131 (269)
T ss_dssp -----------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccCh
Confidence 67899999998875 58899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCC
Q psy14007 81 KEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGA 160 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~ 160 (198)
.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++ |.+++..+..|.||||+|+..|+.+++++|+++|+
T Consensus 132 ~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~--gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Ga 209 (269)
T 4b93_B 132 FQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQH--GASINASNNKGNTALHEAVIEKHVFVVELLLLHGA 209 (269)
T ss_dssp HHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHT--TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC--CCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCC
Confidence 9999999999999999999999999999999999999999998 66888999999999999999999999999999999
Q ss_pred CcceecCCCCCccccCCChhH-HHHHhhhcccccC
Q psy14007 161 RLDIQNKEKKTPLDLLPLPHL-AQALTEIEPIVGD 194 (198)
Q Consensus 161 ~~~~~~~~g~t~~~~a~~~~~-~~~~~~l~~~~~~ 194 (198)
|++.+|..|+||+|+|+.++. .++++.+...+..
T Consensus 210 d~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~ 244 (269)
T 4b93_B 210 SVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVAS 244 (269)
T ss_dssp CSCCCCTTSCCSGGGSCTTCHHHHHTTC-------
T ss_pred CCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhchh
Confidence 999999999999999998876 4666666555443
No 9
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.7e-43 Score=246.41 Aligned_cols=194 Identities=23% Similarity=0.246 Sum_probs=181.3
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCc-----cccCCCCCcHHHH
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKN-KSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADV-----NAKADGGHSALQY 74 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~-~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~-----~~~~~~~~t~l~~ 74 (198)
.|+||||+|+..|+.+++++|++. |.+++..+..|.||||+|+..|+.+++++|++.++++ +..+..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 489999999999999999999998 9999999999999999999999999999999999876 5567789999999
Q ss_pred HHhcChHHHHHHHHhcCCCCCcCCC-------------CCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHH
Q psy14007 75 ACSKGWKEIAELLIHNHANVNIQDV-------------RGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLH 141 (198)
Q Consensus 75 a~~~~~~~~~~~l~~~~~~~~~~~~-------------~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~ 141 (198)
|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+++ |.+++..|..|.||||
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~d~~g~t~L~ 159 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH--GADIRAQDSLGNTVLH 159 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHH
Confidence 9999999999999999999988765 799999999999999999999998 6688999999999999
Q ss_pred HHHHhCChhhH----HHHHHcCCCc------ceecCCCCCccccCCChhHHHHHhhhcccccCCC
Q psy14007 142 YACEEKRLTDA----KLLVRCGARL------DIQNKEKKTPLDLLPLPHLAQALTEIEPIVGDLP 196 (198)
Q Consensus 142 ~a~~~~~~~~~----~~Ll~~g~~~------~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~~~ 196 (198)
+|+..++.+++ ++|+++|++. +.+|..|.||+|+|+..++.++++.|.+.+.+..
T Consensus 160 ~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 160 ILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp HHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC-
T ss_pred HHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccch
Confidence 99999999988 9999999988 5899999999999999999999999998876543
No 10
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.2e-42 Score=244.31 Aligned_cols=194 Identities=25% Similarity=0.330 Sum_probs=185.3
Q ss_pred CcchhHHHHHhcCcHHHHHHHHh----CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q psy14007 1 NERLLIHWAALSGREDVVDFLLK----NKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYAC 76 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~----~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~ 76 (198)
+|+||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~ 87 (241)
T 1k1a_A 8 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLAC 87 (241)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 58999999999999999999997 89999999999999999999999999999999999999999999999999999
Q ss_pred hcChHHHHHHHHhcCC----CCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCC-CCCCCHHHHHHHhCChhh
Q psy14007 77 SKGWKEIAELLIHNHA----NVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITD-AYGNTPLHYACEEKRLTD 151 (198)
Q Consensus 77 ~~~~~~~~~~l~~~~~----~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~ 151 (198)
..++.+++++|++.+. +++..+..|.||||+|+..++.+++++|++. +.+++..+ ..|.||||.|+..++.++
T Consensus 88 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (241)
T 1k1a_A 88 EHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER--GADIDAVDIKSGRSPLIHAVENNSLSM 165 (241)
T ss_dssp HTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred HcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHc--CCCcccccccCCCcHHHHHHHcCCHHH
Confidence 9999999999999987 7888899999999999999999999999998 55777777 789999999999999999
Q ss_pred HHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhcccccCCC
Q psy14007 152 AKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGDLP 196 (198)
Q Consensus 152 ~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~~~ 196 (198)
+++|+++|++++.++..|.||+|+|+..++.++++.|.+.+.++.
T Consensus 166 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 210 (241)
T 1k1a_A 166 VQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSS 210 (241)
T ss_dssp HHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC
Confidence 999999999999999999999999999999999999999988865
No 11
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.4e-43 Score=249.81 Aligned_cols=194 Identities=25% Similarity=0.332 Sum_probs=157.7
Q ss_pred CcchhHHHHHhcC-------------cHHHHHHHHhCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCC
Q psy14007 1 NERLLIHWAALSG-------------REDVVDFLLKNKSPVDP-KDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKAD 66 (198)
Q Consensus 1 ~g~~~L~~A~~~g-------------~~~~~~~l~~~~~~~~~-~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~ 66 (198)
+|+||||+|+..| +.+++++|++.|.+++. .+..|.||||+|+..|+.+++++|+++|++++.++.
T Consensus 9 ~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 88 (253)
T 1yyh_A 9 DGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDN 88 (253)
T ss_dssp -------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 5899999999987 89999999999999865 488999999999999999999999999999999999
Q ss_pred CCCcHHHHHHhcChHHHHHHHHhcCC-CCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHH
Q psy14007 67 GGHSALQYACSKGWKEIAELLIHNHA-NVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACE 145 (198)
Q Consensus 67 ~~~t~l~~a~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~ 145 (198)
.|.||||+|+..++.+++++|++.+. +++..+..|.||||+|+..++.+++++|++. +.+++..+..|.||||+|+.
T Consensus 89 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~ 166 (253)
T 1yyh_A 89 MGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS--HADVNAVDDLGKSALHWAAA 166 (253)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHT--TCCTTCBCTTSCBHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHH
Confidence 99999999999999999999999987 8899999999999999999999999999998 66888999999999999999
Q ss_pred hCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhcccccCCC
Q psy14007 146 EKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGDLP 196 (198)
Q Consensus 146 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~~~ 196 (198)
.++.+++++|+++|++++.++..|.||+|+|+..++.++++.|.+.+.++.
T Consensus 167 ~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 217 (253)
T 1yyh_A 167 VNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217 (253)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcc
Confidence 999999999999999999999999999999999999999999999988764
No 12
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.4e-43 Score=248.53 Aligned_cols=193 Identities=22% Similarity=0.337 Sum_probs=180.2
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCC----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKS----PVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYAC 76 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~----~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~ 76 (198)
+|+||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+
T Consensus 7 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 86 (236)
T 1ikn_D 7 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC 86 (236)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHH
T ss_pred CCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 68999999999999999999998765 68899999999999999999999999999999999999999999999999
Q ss_pred hcChHHHHHHHHhcCCC------CCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCC-CCCCHHHHHHHhCCh
Q psy14007 77 SKGWKEIAELLIHNHAN------VNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDA-YGNTPLHYACEEKRL 149 (198)
Q Consensus 77 ~~~~~~~~~~l~~~~~~------~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~-~g~t~l~~a~~~~~~ 149 (198)
..++.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|+++ +.+++..+. .|.||||+|+..++.
T Consensus 87 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~~g~tpL~~A~~~~~~ 164 (236)
T 1ikn_D 87 EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL--GADVNAQEPCNGRTALHLAVDLQNP 164 (236)
T ss_dssp HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH--TCCTTCCCTTTCCCHHHHHHHTTCH
T ss_pred HcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 99999999999999875 466778899999999999999999999998 668888887 899999999999999
Q ss_pred hhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhcccccCC
Q psy14007 150 TDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGDL 195 (198)
Q Consensus 150 ~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~~ 195 (198)
+++++|+++|++++.++..|.||+++|+..++.++++.|.+.+++.
T Consensus 165 ~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 165 DLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 210 (236)
T ss_dssp HHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGG
T ss_pred HHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhh
Confidence 9999999999999999999999999999999999999999998854
No 13
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.3e-42 Score=248.68 Aligned_cols=190 Identities=28% Similarity=0.325 Sum_probs=99.8
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhc---
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSK--- 78 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~--- 78 (198)
|+||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..
T Consensus 59 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~ 138 (285)
T 3d9h_A 59 DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSW 138 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHH
Confidence 44555555555555555555555555555555555555555555555555555555555555555555555555554
Q ss_pred -----------------------------ChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCc
Q psy14007 79 -----------------------------GWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDV 129 (198)
Q Consensus 79 -----------------------------~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~ 129 (198)
|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++. +.++
T Consensus 139 ~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~ 216 (285)
T 3d9h_A 139 DCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLES--GADV 216 (285)
T ss_dssp HHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHT--TCCT
T ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHC--CCCC
Confidence 444555555555555555555555555555555555555555555 2333
Q ss_pred ccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhccc-ccCCC
Q psy14007 130 NITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPI-VGDLP 196 (198)
Q Consensus 130 ~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~-~~~~~ 196 (198)
+ .+..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+ ++.++++.|.+. +.++|
T Consensus 217 ~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~ 281 (285)
T 3d9h_A 217 N-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLEREGASLP 281 (285)
T ss_dssp T-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC-----
T ss_pred C-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccCCC
Confidence 3 2445555666555555555566665556655555556666666655 223455555554 44433
No 14
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=6.9e-42 Score=239.93 Aligned_cols=190 Identities=31% Similarity=0.468 Sum_probs=180.5
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC-CCccccCCCCCcHHHHHHhcC
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNG-ADVNAKADGGHSALQYACSKG 79 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~-~~~~~~~~~~~t~l~~a~~~~ 79 (198)
+|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.+ .+++..+..|.||||.|+..+
T Consensus 43 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 122 (237)
T 3b7b_A 43 DQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYK 122 (237)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcC
Confidence 4789999999999999999999999999999999999999999999999999999998 788889999999999999999
Q ss_pred hHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcC
Q psy14007 80 WKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCG 159 (198)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 159 (198)
+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..++.+++++|+++|
T Consensus 123 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 200 (237)
T 3b7b_A 123 HVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAA--KCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRD 200 (237)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred CHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcC
Confidence 99999999999999999999999999999999999999999998 6688889999999999999999999999999999
Q ss_pred CCcceecCCCCCccccCCChhHHHHHhhhcccc
Q psy14007 160 ARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIV 192 (198)
Q Consensus 160 ~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~ 192 (198)
++++.+|..|.||+|+|+..+....+.++.+..
T Consensus 201 ad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~~l 233 (237)
T 3b7b_A 201 SDVTLKNKEGETPLQCASLNSQVWSALQMSKAL 233 (237)
T ss_dssp CCTTCCCTTSCCHHHHSCTTCHHHHHHHHHHHH
T ss_pred CCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999987766665543
No 15
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=6.3e-42 Score=234.55 Aligned_cols=190 Identities=27% Similarity=0.340 Sum_probs=180.9
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKS-PVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~-~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
+.+|||.|+..|+.+.++.|++.+. +++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 84 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGR 84 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 6799999999999999999999876 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-hcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCC-----hhhHHH
Q psy14007 81 KEIAELLI-HNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKR-----LTDAKL 154 (198)
Q Consensus 81 ~~~~~~l~-~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~-----~~~~~~ 154 (198)
.+++++|+ ..+.+++..+..|.||||+|+..++.+++++|++++ ..+++..+..|.||||.|+..++ .+++++
T Consensus 85 ~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~ 163 (201)
T 3hra_A 85 TEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDG-REDIDFQNDFGYTALIEAVGLREGNQLYQDIVKL 163 (201)
T ss_dssp HHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHC-CCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHH
T ss_pred HHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHH
Confidence 99999999 677789999999999999999999999999999984 26888999999999999999998 999999
Q ss_pred HHHcCCCcceecCCCCCccccCCChhHHHHHhhhcccc
Q psy14007 155 LVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIV 192 (198)
Q Consensus 155 Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~ 192 (198)
|+++|++++.++..|.||+|+|+..++.++++.|.+++
T Consensus 164 Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 164 LMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99999999999999999999999999999999998865
No 16
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=4.4e-42 Score=239.56 Aligned_cols=182 Identities=32% Similarity=0.479 Sum_probs=105.8
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCC--CCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHhcC--CCccccCCCCCcHHHHHH
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNK--SPVDP-KDDTNRTPLILAAAAGKLEIVRLLISNG--ADVNAKADGGHSALQYAC 76 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~--~~~~~-~~~~g~~~L~~A~~~~~~~~~~~L~~~~--~~~~~~~~~~~t~l~~a~ 76 (198)
|+||||+|+..|+.+++++|+++| .+++. .+..|.||||+|+..|+.+++++|+++| ++++..+..|.||||.|+
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~ 115 (228)
T 2dzn_A 36 GRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAV 115 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHH
Confidence 555666666666666666666655 33333 4455566666666666666666666555 555555555666666666
Q ss_pred hcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHH
Q psy14007 77 SKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLV 156 (198)
Q Consensus 77 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 156 (198)
..++.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.+ ..+++..|..|.||||+|+..++.+++++|+
T Consensus 116 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 194 (228)
T 2dzn_A 116 GKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG-KSAVNWQDKQGWTPLFHALAEGHGDAAVLLV 194 (228)
T ss_dssp HTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTT-CCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcC-cccccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 666666666666666666655556666666666666666666666552 1445555555666666666666666666666
Q ss_pred -HcCCCcceecCCCCCccccCCChhHHHH
Q psy14007 157 -RCGARLDIQNKEKKTPLDLLPLPHLAQA 184 (198)
Q Consensus 157 -~~g~~~~~~~~~g~t~~~~a~~~~~~~~ 184 (198)
++|++++.+|..|.||+++|...+..++
T Consensus 195 ~~~ga~~~~~~~~g~t~l~~A~~~~~~~~ 223 (228)
T 2dzn_A 195 EKYGAEYDLVDNKGAKAEDVALNEQVKKF 223 (228)
T ss_dssp HHHCCCSCCBCTTSCBGGGGCSSTTHHHH
T ss_pred HhcCCCCCccCCCCCcHHHHHHHHHHHHH
Confidence 5566666666666666666655544443
No 17
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=2e-41 Score=225.62 Aligned_cols=160 Identities=44% Similarity=0.588 Sum_probs=149.5
Q ss_pred hhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHH
Q psy14007 4 LLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEI 83 (198)
Q Consensus 4 ~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 83 (198)
..|+.|++.|+.++|++|++.|++++.++..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..|+.++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcc
Q psy14007 84 AELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLD 163 (198)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~ 163 (198)
+++|+++|++++.++..|+||||+|+..|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|+++|++++
T Consensus 86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~--gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 86 VKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISK--GADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 9999999999999999999999999999999999999998 66889999999999999999999999999999999987
Q ss_pred ee
Q psy14007 164 IQ 165 (198)
Q Consensus 164 ~~ 165 (198)
..
T Consensus 164 ~~ 165 (169)
T 4gpm_A 164 HH 165 (169)
T ss_dssp --
T ss_pred CC
Confidence 64
No 18
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=3.1e-41 Score=235.30 Aligned_cols=193 Identities=25% Similarity=0.299 Sum_probs=180.7
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHhcC--CCccc-cCCCCCcHHHHHHh
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKSPVD-PKDDTNRTPLILAAAAGKLEIVRLLISNG--ADVNA-KADGGHSALQYACS 77 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~~~~-~~~~~g~~~L~~A~~~~~~~~~~~L~~~~--~~~~~-~~~~~~t~l~~a~~ 77 (198)
|+||||+|+..|+.+++++|++.+.++. ..+..|.||||+|+..|+.+++++|++.| .+++. .+..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 7899999999999999999999998765 48899999999999999999999999999 56665 77899999999999
Q ss_pred cChHHHHHHHHhcC--CCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHH
Q psy14007 78 KGWKEIAELLIHNH--ANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLL 155 (198)
Q Consensus 78 ~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 155 (198)
.|+.+++++|++.| .+++..+..|.||||+|+..++.+++++|+++ +.+++..+..|.||||+|+..|+.+++++|
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 159 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN--GASVRIKDKFNQIPLHRAASVGSLKLIELL 159 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHc--CCCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999998 88899999999999999999999999999998 668889999999999999999999999999
Q ss_pred HHcC-CCcceecCCCCCccccCCChhHHHHHhhhc-ccccCCC
Q psy14007 156 VRCG-ARLDIQNKEKKTPLDLLPLPHLAQALTEIE-PIVGDLP 196 (198)
Q Consensus 156 l~~g-~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~-~~~~~~~ 196 (198)
+++| ++++.++..|.||+|+|+..++.++++.|. +.+.++.
T Consensus 160 l~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~ 202 (228)
T 2dzn_A 160 CGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYD 202 (228)
T ss_dssp HTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSC
T ss_pred HhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCC
Confidence 9999 999999999999999999999999999999 7787764
No 19
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=243.57 Aligned_cols=157 Identities=25% Similarity=0.344 Sum_probs=128.2
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChH
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWK 81 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~ 81 (198)
|+||||+|+..|+.+++++|++.|++++..+ .|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.
T Consensus 125 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~ 203 (285)
T 3d9h_A 125 WHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR 203 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCH
T ss_pred CCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcH
Confidence 5666666666666666666666666665433 377777777777777888888888888888888999999999999999
Q ss_pred HHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHc-CC
Q psy14007 82 EIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRC-GA 160 (198)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-g~ 160 (198)
+++++|++.|++++. +..|.||||+|+..++.+++++|+++ |.+++.+|..|.||||+|+ ++.+++++|+++ |+
T Consensus 204 ~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a 278 (285)
T 3d9h_A 204 ACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDF--GADTQAKNAEGKRPVELVP--PESPLAQLFLEREGA 278 (285)
T ss_dssp HHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC--
T ss_pred HHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhcc
Confidence 999999999999985 88899999999999999999999998 6788999999999999999 557999999998 77
Q ss_pred Ccce
Q psy14007 161 RLDI 164 (198)
Q Consensus 161 ~~~~ 164 (198)
++..
T Consensus 279 ~l~~ 282 (285)
T 3d9h_A 279 SLPK 282 (285)
T ss_dssp ----
T ss_pred CCCC
Confidence 7643
No 20
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=4.6e-41 Score=239.07 Aligned_cols=187 Identities=28% Similarity=0.320 Sum_probs=172.1
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
+|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++. +..|.||||.|+..|+
T Consensus 35 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~ 113 (261)
T 2xai_A 35 DHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGH 113 (261)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCc
Confidence 589999999999999999999999999999999999999999999999999999999999875 4569999999999999
Q ss_pred HHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCC
Q psy14007 81 KEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGA 160 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~ 160 (198)
.+++++|+++|++++..+..|.||||+|+..++.+++++|++. +.+++. +..|.||||+|+..++.+++++|+++|+
T Consensus 114 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~ga 190 (261)
T 2xai_A 114 VECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLES--GADVNQ-GKGQDSPLHAVARTASEELACLLMDFGA 190 (261)
T ss_dssp HHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHH--TCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHc--CCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999998 456663 7889999999999999999999999999
Q ss_pred CcceecCCCCCccccCCChhHHHHHhhhccccc
Q psy14007 161 RLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVG 193 (198)
Q Consensus 161 ~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~ 193 (198)
+++.+|..|.||+|+|+..+. +++.+.....
T Consensus 191 d~~~~d~~g~tpl~~A~~~~~--~~~~ll~~~~ 221 (261)
T 2xai_A 191 DTQAKNAEGKRPVELVPPESP--LAQLFLEREG 221 (261)
T ss_dssp CTTCCCTTSCCGGGGSCTTCT--HHHHHHHC-C
T ss_pred CCCCcCCCCCChhhhcccccc--HHHHHHhccC
Confidence 999999999999999996654 5555555443
No 21
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.4e-41 Score=250.55 Aligned_cols=194 Identities=28% Similarity=0.303 Sum_probs=178.5
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
+|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++
T Consensus 57 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 136 (351)
T 3utm_A 57 RKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNR 136 (351)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcCC------------------------------------------------------CCCCcHHH
Q psy14007 81 KEIAELLIHNHANVNIQD------------------------------------------------------VRGATPLH 106 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~------------------------------------------------------~~~~~~l~ 106 (198)
.+++++|+++|++++..+ ..+.||+|
T Consensus 137 ~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~ 216 (351)
T 3utm_A 137 VEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALH 216 (351)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHH
T ss_pred HHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHH
Confidence 999999999998876543 45678899
Q ss_pred HHHhc---CChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHH
Q psy14007 107 RAASQ---GITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQ 183 (198)
Q Consensus 107 ~a~~~---~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~ 183 (198)
+|+.. +..+++++|++. +.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||+|+|+..++.+
T Consensus 217 ~A~~~~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~ 294 (351)
T 3utm_A 217 CAVASLHPKRKQVAELLLRK--GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQ 294 (351)
T ss_dssp HHHHCCSTTHHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHHHhCccHHHHHHHHHHc--CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 99988 557899999988 6678889999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcccccCCC
Q psy14007 184 ALTEIEPIVGDLP 196 (198)
Q Consensus 184 ~~~~l~~~~~~~~ 196 (198)
+++.|.+.+.++.
T Consensus 295 ~v~~Ll~~gad~~ 307 (351)
T 3utm_A 295 TCRLLLSYGSDPS 307 (351)
T ss_dssp HHHHHHHTTCCTT
T ss_pred HHHHHHHcCCCCC
Confidence 9999999988764
No 22
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.1e-41 Score=236.57 Aligned_cols=193 Identities=30% Similarity=0.372 Sum_probs=184.1
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKSP-VDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~~-~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
++++||.|+..|+.+.++++++.+.. ++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 85 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGX 85 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCH
Confidence 67999999999999999999987654 67788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCC
Q psy14007 81 KEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGA 160 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~ 160 (198)
.+++++|+++|++++..+..|.||||+|+..++.+++++|+++ +.+++..+..|.||||.|+..++.+++++|+++|+
T Consensus 86 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 163 (231)
T 3aji_A 86 DEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEG--GANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKA 163 (231)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999998 66788899999999999999999999999999999
Q ss_pred CcceecCCCCCccccCCChhHHHHHhhhcccccCCC
Q psy14007 161 RLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGDLP 196 (198)
Q Consensus 161 ~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~~~ 196 (198)
+++.++..|.||+|+|+..++.++++.|.+.+.++.
T Consensus 164 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 199 (231)
T 3aji_A 164 STNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIY 199 (231)
T ss_dssp CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred CccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Confidence 999999999999999999999999999999988764
No 23
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=3.5e-42 Score=255.57 Aligned_cols=193 Identities=23% Similarity=0.276 Sum_probs=150.1
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccc-----------------
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNA----------------- 63 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~----------------- 63 (198)
+|+||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 19 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~ 98 (364)
T 3ljn_A 19 ENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTD 98 (364)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHH
Confidence 378899999999999999999999999999999999999999999999999999988875544
Q ss_pred -----------------------------------cCCCCCcHHHHHHhcC--hHHHHHHHHhcCCCCCcCCCCCCcHHH
Q psy14007 64 -----------------------------------KADGGHSALQYACSKG--WKEIAELLIHNHANVNIQDVRGATPLH 106 (198)
Q Consensus 64 -----------------------------------~~~~~~t~l~~a~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~l~ 106 (198)
.+..|.||||+|+..| +.+++++|++.|++++..+..|.||||
T Consensus 99 ~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~ 178 (364)
T 3ljn_A 99 LVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLM 178 (364)
T ss_dssp HHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHH
T ss_pred HHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 4445677777777777 777777777777777777777777777
Q ss_pred HHHhcCChHHHHHHHhccCC---CCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHH
Q psy14007 107 RAASQGITPVVKLLLTQRLD---IDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQ 183 (198)
Q Consensus 107 ~a~~~~~~~~~~~l~~~~~~---~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~ 183 (198)
+|+..|+.+++++|++++.. .+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||+|+|+..++.+
T Consensus 179 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~ 258 (364)
T 3ljn_A 179 RAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVL 258 (364)
T ss_dssp HHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHH
T ss_pred HHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHH
Confidence 77777777777777776321 116667777777777777777777777777777777777777777777777777777
Q ss_pred HHhhhccccc
Q psy14007 184 ALTEIEPIVG 193 (198)
Q Consensus 184 ~~~~l~~~~~ 193 (198)
+++.|.+.++
T Consensus 259 ~v~~Ll~~~~ 268 (364)
T 3ljn_A 259 LTKELLQKTD 268 (364)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHcCC
Confidence 7777776653
No 24
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=9e-41 Score=241.72 Aligned_cols=188 Identities=31% Similarity=0.398 Sum_probs=164.6
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
+|.++||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~ 118 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGY 118 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcCCC------------------------------------------------------------C
Q psy14007 81 KEIAELLIHNHANVNIQDV------------------------------------------------------------R 100 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~------------------------------------------------------------~ 100 (198)
.+++++|+++|++++..+. .
T Consensus 119 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 198 (299)
T 1s70_B 119 LDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKS 198 (299)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTT
T ss_pred HHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCC
Confidence 9999999999888766543 4
Q ss_pred CCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChh
Q psy14007 101 GATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPH 180 (198)
Q Consensus 101 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~ 180 (198)
|.||||+|+..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|...
T Consensus 199 g~t~L~~A~~~g~~~~v~~Ll~~--g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~- 275 (299)
T 1s70_B 199 GGTALHVAAAKGYTEVLKLLIQA--RYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED- 275 (299)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG-
T ss_pred CCCHHHHHHHCCcHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH-
Confidence 66888888999999999999987 567888899999999999999999999999999999999999999999999764
Q ss_pred HHHHHhhhccc
Q psy14007 181 LAQALTEIEPI 191 (198)
Q Consensus 181 ~~~~~~~l~~~ 191 (198)
..+.++++.+.
T Consensus 276 ~~~~l~~l~~~ 286 (299)
T 1s70_B 276 ILGYLEELQKK 286 (299)
T ss_dssp GGHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 45555555443
No 25
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.9e-41 Score=252.27 Aligned_cols=193 Identities=22% Similarity=0.327 Sum_probs=182.4
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC---CCccccCCCCCcHHHHHHh
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNG---ADVNAKADGGHSALQYACS 77 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~---~~~~~~~~~~~t~l~~a~~ 77 (198)
+|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++++ .+++..+..|.||||+|+.
T Consensus 165 ~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~ 244 (373)
T 2fo1_E 165 DENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAH 244 (373)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999987 7888999999999999999
Q ss_pred cC---hHHHHHHHHhcCCCCCc--------CCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHh
Q psy14007 78 KG---WKEIAELLIHNHANVNI--------QDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEE 146 (198)
Q Consensus 78 ~~---~~~~~~~l~~~~~~~~~--------~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~ 146 (198)
.+ +.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.+ +.+++..|..|.||||+|+..
T Consensus 245 ~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~-~~~~n~~d~~g~TpL~~A~~~ 323 (373)
T 2fo1_E 245 NEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEK-GSNKDKQDEDGKTPIMLAAQE 323 (373)
T ss_dssp SCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHS-CCCTTCCCTTCCCHHHHHHHH
T ss_pred hCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhc-CCCccCcCCCCCCHHHHHHHc
Confidence 98 99999999999999876 5668999999999999999999999874 478899999999999999999
Q ss_pred CChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhcccccC
Q psy14007 147 KRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGD 194 (198)
Q Consensus 147 ~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~ 194 (198)
|+.+++++|+++|++++.+|..|.||+++|+..++.++++.|.+.+++
T Consensus 324 g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 324 GRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp TCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred CCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 999999999999999999999999999999999999999999998765
No 26
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.9e-42 Score=249.14 Aligned_cols=191 Identities=18% Similarity=0.156 Sum_probs=180.0
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
+|+||||+|+..|+.+++++|+++|++++.. +|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 30 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~ 107 (285)
T 3kea_A 30 HGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGN 107 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCC
Confidence 5899999999999999999999999999887 48999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcCCCCC-CcHHHHHHhcCChHHHHHHHhccCCCCcccCCC-CCCCHHHHHHHhCChhhHHHHHHc
Q psy14007 81 KEIAELLIHNHANVNIQDVRG-ATPLHRAASQGITPVVKLLLTQRLDIDVNITDA-YGNTPLHYACEEKRLTDAKLLVRC 158 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~-~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~ 158 (198)
.+++++|+++|++++..+..| .||||+|+..|+.+++++|++++. +. .+. .|.||||+|+..|+.+++++|+++
T Consensus 108 ~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~--~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 183 (285)
T 3kea_A 108 MQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP--ST--FDLAILLSCIHITIKNGHVDMMILLLDY 183 (285)
T ss_dssp HHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSC--TT--CCCSTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCC--cc--ccccCCccHHHHHHHcChHHHHHHHHHc
Confidence 999999999999999999999 799999999999999999999853 33 333 789999999999999999999999
Q ss_pred CCCcceecCCCCCc-cccCCChhHHHHHhhhcccccCCCC
Q psy14007 159 GARLDIQNKEKKTP-LDLLPLPHLAQALTEIEPIVGDLPE 197 (198)
Q Consensus 159 g~~~~~~~~~g~t~-~~~a~~~~~~~~~~~l~~~~~~~~~ 197 (198)
|++++.++..|.|| +|+|+..++.++++.|.+.+.++..
T Consensus 184 gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~ 223 (285)
T 3kea_A 184 MTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYS 223 (285)
T ss_dssp HHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTT
T ss_pred CCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999999998 9999999999999999999988753
No 27
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=5.9e-41 Score=240.60 Aligned_cols=180 Identities=25% Similarity=0.233 Sum_probs=155.9
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC--------------------
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGAD-------------------- 60 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~-------------------- 60 (198)
+|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++++.
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (282)
T 1oy3_D 44 LGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDT 123 (282)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcch
Confidence 489999999999999999999999999999999999999999999999999999998754
Q ss_pred ---------------------------ccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCC-CCcHHHHHHhcC
Q psy14007 61 ---------------------------VNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVR-GATPLHRAASQG 112 (198)
Q Consensus 61 ---------------------------~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~l~~a~~~~ 112 (198)
++.++..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~ 203 (282)
T 1oy3_D 124 SHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQ 203 (282)
T ss_dssp --------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred hcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcC
Confidence 5567788999999999999999999999999999998854 999999999999
Q ss_pred ChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHH
Q psy14007 113 ITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLA 182 (198)
Q Consensus 113 ~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~ 182 (198)
+.+++++|+++ |.+++.++..|.||||+|+..++.+++++|+++|++++.++..|.||+++|......
T Consensus 204 ~~~~v~~Ll~~--gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~~ 271 (282)
T 1oy3_D 204 AASVLELLLKA--GADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDS 271 (282)
T ss_dssp CHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC----------------
T ss_pred CHHHHHHHHHc--CCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCcccc
Confidence 99999999998 678899999999999999999999999999999999999999999999999876543
No 28
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-40 Score=239.38 Aligned_cols=193 Identities=28% Similarity=0.323 Sum_probs=115.9
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChH
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWK 81 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~ 81 (198)
|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||.|+..++.
T Consensus 39 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 118 (285)
T 1wdy_A 39 GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV 118 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCH
Confidence 45555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHhcCCC--------------------------------------------CCcCCCCCCcHHHHHHhcCC----
Q psy14007 82 EIAELLIHNHAN--------------------------------------------VNIQDVRGATPLHRAASQGI---- 113 (198)
Q Consensus 82 ~~~~~l~~~~~~--------------------------------------------~~~~~~~~~~~l~~a~~~~~---- 113 (198)
+++++|++.|++ ++..+..|.||+|+|+..+.
T Consensus 119 ~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 198 (285)
T 1wdy_A 119 KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDV 198 (285)
T ss_dssp HHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTH
T ss_pred HHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchH
Confidence 555555555444 44444445555555555555
Q ss_pred hHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHH-cCCCcceecCCCCCccccCCChhHHHHHhhhcccc
Q psy14007 114 TPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVR-CGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIV 192 (198)
Q Consensus 114 ~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~ 192 (198)
.+++++|+++ +.+++..+..|.||||+|+..++.+++++|++ .|++++.++..|.||+|+|+..++.++++.|.+.+
T Consensus 199 ~~i~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~G 276 (285)
T 1wdy_A 199 EAITHLLLDH--GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG 276 (285)
T ss_dssp HHHHHHHHHT--TCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcC
Confidence 4455555554 34555666666777777777777777777776 66777777777777777777777777777777766
Q ss_pred cCCC
Q psy14007 193 GDLP 196 (198)
Q Consensus 193 ~~~~ 196 (198)
+++.
T Consensus 277 a~~~ 280 (285)
T 1wdy_A 277 ASTD 280 (285)
T ss_dssp SCSC
T ss_pred CCCC
Confidence 6653
No 29
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.6e-42 Score=245.93 Aligned_cols=193 Identities=26% Similarity=0.278 Sum_probs=176.8
Q ss_pred cchhHHHHHhcCcHH----HHHHHHhCCCCCCC----CCCCCCCHHHHHHHc---CCHHHHHHHHhcCCCcccc------
Q psy14007 2 ERLLIHWAALSGRED----VVDFLLKNKSPVDP----KDDTNRTPLILAAAA---GKLEIVRLLISNGADVNAK------ 64 (198)
Q Consensus 2 g~~~L~~A~~~g~~~----~~~~l~~~~~~~~~----~~~~g~~~L~~A~~~---~~~~~~~~L~~~~~~~~~~------ 64 (198)
|+||||+|+..|+.+ ++++|++.|.+++. .+..|.||||+|+.. |+.+++++|++.|++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 789999999999997 66777789999998 899999999999999 9999999999988776533
Q ss_pred -----CCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCC-------------CCcHHHHHHhcCChHHHHHHHhcc-C
Q psy14007 65 -----ADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVR-------------GATPLHRAASQGITPVVKLLLTQR-L 125 (198)
Q Consensus 65 -----~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~-------------~~~~l~~a~~~~~~~~~~~l~~~~-~ 125 (198)
+..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|++.. .
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ 161 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ 161 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 367999999999999999999999999999998876 999999999999999999999921 2
Q ss_pred CCCcccCCCCCCCHHHHHHH--hCChh-------hHHHHHHcCCCc-------ceecCCCCCccccCCChhHHHHHhhhc
Q psy14007 126 DIDVNITDAYGNTPLHYACE--EKRLT-------DAKLLVRCGARL-------DIQNKEKKTPLDLLPLPHLAQALTEIE 189 (198)
Q Consensus 126 ~~~~~~~~~~g~t~l~~a~~--~~~~~-------~~~~Ll~~g~~~-------~~~~~~g~t~~~~a~~~~~~~~~~~l~ 189 (198)
+.+++..|..|.||||+|+. .++.+ ++++|+++|+++ +.+|..|.||+|+|+..++.++++.|.
T Consensus 162 ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll 241 (256)
T 2etb_A 162 PASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHIL 241 (256)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 77889999999999999999 77888 999999999999 999999999999999999999999999
Q ss_pred ccccC
Q psy14007 190 PIVGD 194 (198)
Q Consensus 190 ~~~~~ 194 (198)
+.+.+
T Consensus 242 ~~g~~ 246 (256)
T 2etb_A 242 QREFS 246 (256)
T ss_dssp HHHHH
T ss_pred hCCCC
Confidence 87754
No 30
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.3e-40 Score=236.79 Aligned_cols=193 Identities=24% Similarity=0.277 Sum_probs=163.8
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcC
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPK-DDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKG 79 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~-~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~ 79 (198)
+|+++||+|+..|+.+++++|++.|++++.. +..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAG 83 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence 4789999999999999999999999999987 778999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccC----------CCCCCCHHHHHHHhCCh
Q psy14007 80 WKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNIT----------DAYGNTPLHYACEEKRL 149 (198)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~----------~~~g~t~l~~a~~~~~~ 149 (198)
+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++++. +++.. +..|.||||.|+..++.
T Consensus 84 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~--~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 161 (285)
T 1wdy_A 84 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGA--NVNLRRKTKEDQERLRKGGATALMDAAEKGHV 161 (285)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTC--CTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCH
T ss_pred CHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCC--CcccccccHHHHHhhccCCCcHHHHHHHcCCH
Confidence 9999999999999999999999999999999999999999998743 44444 56677777777777777
Q ss_pred hhHHHHHHc-CCCcceecCCCCCccccCCChhH----HHHHhhhcccccCC
Q psy14007 150 TDAKLLVRC-GARLDIQNKEKKTPLDLLPLPHL----AQALTEIEPIVGDL 195 (198)
Q Consensus 150 ~~~~~Ll~~-g~~~~~~~~~g~t~~~~a~~~~~----~~~~~~l~~~~~~~ 195 (198)
+++++|+++ |++++..+..|.||+|.|+..+. .++++.|.+.+.++
T Consensus 162 ~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~ 212 (285)
T 1wdy_A 162 EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV 212 (285)
T ss_dssp HHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCC
Confidence 777777765 77766666666666666666555 66666666665554
No 31
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-40 Score=251.78 Aligned_cols=194 Identities=30% Similarity=0.379 Sum_probs=177.2
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
+|+||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 13 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~ 92 (437)
T 1n11_A 13 SGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGH 92 (437)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCC
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCC
Q psy14007 81 KEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGA 160 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~ 160 (198)
.+++++|+++|++++..+..|.||||+|+..|+.+++++|++. +.+.+..+..|.||||.|+..|+.+++++|+++|+
T Consensus 93 ~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 170 (437)
T 1n11_A 93 TNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK--EASQACMTKKGFTPLHVAAKYGKVRVAELLLERDA 170 (437)
T ss_dssp HHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC--CCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999987 45667778889999999999999999999999999
Q ss_pred CcceecCCCCCccccCCChhHHHHHhhhcccccCCC
Q psy14007 161 RLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGDLP 196 (198)
Q Consensus 161 ~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~~~ 196 (198)
+++..+..|.||+|+|+..++.++++.|.+.+.++.
T Consensus 171 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 206 (437)
T 1n11_A 171 HPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPH 206 (437)
T ss_dssp CTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSC
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC
Confidence 999999999999999999999999999988877653
No 32
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=5e-41 Score=239.57 Aligned_cols=193 Identities=26% Similarity=0.332 Sum_probs=156.4
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCCC--------CCCCCCCCCCHHHHHHHcCCH-HHHHHHHhcCCCccccCCCCCcHH
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKSP--------VDPKDDTNRTPLILAAAAGKL-EIVRLLISNGADVNAKADGGHSAL 72 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~~--------~~~~~~~g~~~L~~A~~~~~~-~~~~~L~~~~~~~~~~~~~~~t~l 72 (198)
+.++|+.|+..|+.++|++|++.+.+ ++..+..|.|||+.|+..+.. .++++|++.|++++.+|..|.|||
T Consensus 11 ~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpL 90 (269)
T 4b93_B 11 EVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPL 90 (269)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCHH
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 45899999999999999999998875 345677899999999987765 588999999999999999999999
Q ss_pred HHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhH
Q psy14007 73 QYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDA 152 (198)
Q Consensus 73 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 152 (198)
|+|+..|+.+++++|++.+++++..+..|.||++.|+..++.+++++|++. +.+++..|..|.||||+|+..|+.+++
T Consensus 91 h~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~--g~~~n~~d~~g~TpL~~A~~~g~~~~v 168 (269)
T 4b93_B 91 HVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDS--NAKPNKKDLSGNTPLIYACSGGHHELV 168 (269)
T ss_dssp HHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTCCCHHHHHHHTTCGGGH
T ss_pred HHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHCCCHHHH
Confidence 999999999999999999999999999999999999999999999999998 668889999999999999999999999
Q ss_pred HHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhcccccCCC
Q psy14007 153 KLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGDLP 196 (198)
Q Consensus 153 ~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~~~ 196 (198)
++|+++|++++..+..|.||+|+|+..++.++++.|.+.+.++.
T Consensus 169 ~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~ 212 (269)
T 4b93_B 169 ALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQ 212 (269)
T ss_dssp HHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 99999999999999999999999999999999999999998875
No 33
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.9e-40 Score=249.32 Aligned_cols=185 Identities=29% Similarity=0.378 Sum_probs=83.2
Q ss_pred chhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHH
Q psy14007 3 RLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKE 82 (198)
Q Consensus 3 ~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~ 82 (198)
+||||+|+..|+.+++++|++.|.+++..+..|.||||+|+..|+.+++++|++++++++..+..|.||||+|+..++.+
T Consensus 213 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~ 292 (437)
T 1n11_A 213 YTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVP 292 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 34444444444444444444444444444444444444444444444444444444444444444444444444444444
Q ss_pred HHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCc
Q psy14007 83 IAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARL 162 (198)
Q Consensus 83 ~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~ 162 (198)
++++|+++|++++..+..|.||||+|+..|+.+++++|+++ +.+++..+..|.||||+|+..|+.+++++|+++|+++
T Consensus 293 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~ 370 (437)
T 1n11_A 293 VADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQH--QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASP 370 (437)
T ss_dssp HHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred HHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhc--CCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCC
Confidence 44444444444444444444444444444444444444444 3334444444444444444444444444444444444
Q ss_pred ceecCCCCCccccCCChhHHHHHhhhc
Q psy14007 163 DIQNKEKKTPLDLLPLPHLAQALTEIE 189 (198)
Q Consensus 163 ~~~~~~g~t~~~~a~~~~~~~~~~~l~ 189 (198)
+.++..|.||+++|...++.++++.|.
T Consensus 371 ~~~~~~g~t~l~~A~~~g~~~~~~~l~ 397 (437)
T 1n11_A 371 NEVSSDGTTPLAIAKRLGYISVTDVLK 397 (437)
T ss_dssp CCCCSSSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 444444444444444444444444433
No 34
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=6.9e-40 Score=229.81 Aligned_cols=191 Identities=31% Similarity=0.429 Sum_probs=99.4
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKSPVDPKDD-TNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~-~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
|.||||+|+..|+.+++++|+++|.+++.... .|.||||+|+..++.+++++|++.|++++.++..|.||||.|+..++
T Consensus 42 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 121 (240)
T 3eu9_A 42 NVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGH 121 (240)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCH
Confidence 34444444444444444444444444332222 24444444444444444444444444444444444444444444444
Q ss_pred HHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCC-hHHHHHHHhccCCCCcccCCC-CCCCHHHHHHHhCChhhHHHHHHc
Q psy14007 81 KEIAELLIHNHANVNIQDVRGATPLHRAASQGI-TPVVKLLLTQRLDIDVNITDA-YGNTPLHYACEEKRLTDAKLLVRC 158 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~-~~~~~~l~~~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~ 158 (198)
.+++++|++.|++++..+..|.||+|+|+..+. .+++++|++. +.+++..+. .|.||||.|+..++.+++++|+++
T Consensus 122 ~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~--~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 199 (240)
T 3eu9_A 122 TSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTF--NVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEA 199 (240)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHT--TCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhc--CCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 444444444444444444444444444443333 3444444444 334444443 566666666666667777777777
Q ss_pred CCCcceecCCCCCccccCCChhHHHHHhhhcccccC
Q psy14007 159 GARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGD 194 (198)
Q Consensus 159 g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~ 194 (198)
|++++.++..|.||+++|+..++.+++++|.+.+.+
T Consensus 200 g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 200 GANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235 (240)
T ss_dssp TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence 777766666777777777777777777666665544
No 35
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-40 Score=248.07 Aligned_cols=194 Identities=24% Similarity=0.306 Sum_probs=181.2
Q ss_pred CcchhHHHHHhcCcHHHHHHHH--------hCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHH
Q psy14007 1 NERLLIHWAALSGREDVVDFLL--------KNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSAL 72 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~--------~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l 72 (198)
+|+||||+|+..|+.+++++|+ +.|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.|||
T Consensus 124 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L 203 (373)
T 2fo1_E 124 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSAL 203 (373)
T ss_dssp SCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHH
Confidence 4899999999999998887776 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcChHHHHHHHHhcC---CCCCcCCCCCCcHHHHHHhcC---ChHHHHHHHhccCCCCccc--------CCCCCCC
Q psy14007 73 QYACSKGWKEIAELLIHNH---ANVNIQDVRGATPLHRAASQG---ITPVVKLLLTQRLDIDVNI--------TDAYGNT 138 (198)
Q Consensus 73 ~~a~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~l~~a~~~~---~~~~~~~l~~~~~~~~~~~--------~~~~g~t 138 (198)
|+|+..|+.+++++|++.+ .+++..+..|.||||+|+..+ +.+++++|++++. +++. .+..|.|
T Consensus 204 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~--~~~~~~~~~~~~~d~~g~t 281 (373)
T 2fo1_E 204 HQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGA--KVDYDGAARKDSEKYKGRT 281 (373)
T ss_dssp HHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTC--CSSCCSGGGTSSSSCCCCC
T ss_pred HHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCC--CcccccccccCcccccCCC
Confidence 9999999999999999988 789999999999999999998 8999999999854 5443 5678999
Q ss_pred HHHHHHHhCChhhHHHHHHcC-CCcceecCCCCCccccCCChhHHHHHhhhcccccCCC
Q psy14007 139 PLHYACEEKRLTDAKLLVRCG-ARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGDLP 196 (198)
Q Consensus 139 ~l~~a~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~~~ 196 (198)
|||+|+..|+.+++++|++++ ++++.+|..|.||+|+|+..++.++++.|.+.+.++.
T Consensus 282 ~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~ 340 (373)
T 2fo1_E 282 ALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVE 340 (373)
T ss_dssp THHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS
T ss_pred HHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 999999999999999999886 9999999999999999999999999999999988764
No 36
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1.2e-40 Score=238.42 Aligned_cols=194 Identities=26% Similarity=0.280 Sum_probs=174.2
Q ss_pred CcchhHHHHHhcCcHHHHHHHHh----CCCCCC----CCCCCCCCHHHHHHHc---CCHHHHHHHHhcCCCc-------c
Q psy14007 1 NERLLIHWAALSGREDVVDFLLK----NKSPVD----PKDDTNRTPLILAAAA---GKLEIVRLLISNGADV-------N 62 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~----~~~~~~----~~~~~g~~~L~~A~~~---~~~~~~~~L~~~~~~~-------~ 62 (198)
+|+||||+|+..|+.++|+.|++ .+.+++ ..+..|.||||+|+.. |+.+++++|++.|+++ +
T Consensus 12 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~ 91 (273)
T 2pnn_A 12 YDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVN 91 (273)
T ss_dssp CCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhh
Confidence 48899999999999998888886 566665 4578999999999987 9999999999987542 2
Q ss_pred ----ccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCC--------------CCCcHHHHHHhcCChHHHHHHHhcc
Q psy14007 63 ----AKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDV--------------RGATPLHRAASQGITPVVKLLLTQR 124 (198)
Q Consensus 63 ----~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~--------------~~~~~l~~a~~~~~~~~~~~l~~~~ 124 (198)
..+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++.+
T Consensus 92 ~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 171 (273)
T 2pnn_A 92 ASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNS 171 (273)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCS
T ss_pred cccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 2566899999999999999999999999999999887 7999999999999999999999932
Q ss_pred -CCCCcccCCCCCCCHHHHHHHhCC---------hhhHHHHHHcCCCcc-------eecCCCCCccccCCChhHHHHHhh
Q psy14007 125 -LDIDVNITDAYGNTPLHYACEEKR---------LTDAKLLVRCGARLD-------IQNKEKKTPLDLLPLPHLAQALTE 187 (198)
Q Consensus 125 -~~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~Ll~~g~~~~-------~~~~~g~t~~~~a~~~~~~~~~~~ 187 (198)
.+.+++..|..|.||||+|+..++ .+++++|+++|++++ .+|..|.||+|+|+..++.++++.
T Consensus 172 ~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~ 251 (273)
T 2pnn_A 172 WQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAY 251 (273)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred cCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHH
Confidence 277899999999999999999998 799999999999986 589999999999999999999999
Q ss_pred hcccccC
Q psy14007 188 IEPIVGD 194 (198)
Q Consensus 188 l~~~~~~ 194 (198)
|.+.+++
T Consensus 252 Ll~~ga~ 258 (273)
T 2pnn_A 252 ILQREIH 258 (273)
T ss_dssp HHHHHTC
T ss_pred HHHCCCC
Confidence 9999884
No 37
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=7.3e-39 Score=224.59 Aligned_cols=193 Identities=24% Similarity=0.308 Sum_probs=182.1
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccC-CCCCcHHHHHHhcCh
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKA-DGGHSALQYACSKGW 80 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~-~~~~t~l~~a~~~~~ 80 (198)
|.++|++|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.+.+++..+ ..|.||||.|+..++
T Consensus 9 ~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~ 88 (240)
T 3eu9_A 9 STWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88 (240)
T ss_dssp GGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTC
T ss_pred cchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCC
Confidence 6899999999999999999999999999999999999999999999999999999999887655 459999999999999
Q ss_pred HHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCC-hhhHHHHHHcC
Q psy14007 81 KEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKR-LTDAKLLVRCG 159 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~-~~~~~~Ll~~g 159 (198)
.+++++|++.|++++..+..|.||+|+|+..++.+++++|+++ +.+++..+..|.||||.|+..++ .+++++|++.|
T Consensus 89 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~--~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~ 166 (240)
T 3eu9_A 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAK--GQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFN 166 (240)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTT
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhc--CCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999998 66788899999999999997776 89999999999
Q ss_pred CCcceecC-CCCCccccCCChhHHHHHhhhcccccCCC
Q psy14007 160 ARLDIQNK-EKKTPLDLLPLPHLAQALTEIEPIVGDLP 196 (198)
Q Consensus 160 ~~~~~~~~-~g~t~~~~a~~~~~~~~~~~l~~~~~~~~ 196 (198)
++++..+. .|.||+|+|+..++.++++.|.+.+.++.
T Consensus 167 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 204 (240)
T 3eu9_A 167 VSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVD 204 (240)
T ss_dssp CCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT
T ss_pred CCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 99999997 89999999999999999999999988764
No 38
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2.5e-39 Score=237.95 Aligned_cols=195 Identities=28% Similarity=0.293 Sum_probs=150.9
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHhcCCCccc-----------------
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKSPVDPKDD-TNRTPLILAAAAGKLEIVRLLISNGADVNA----------------- 63 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~-~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~----------------- 63 (198)
|+|+||.|++.|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|+++|++++.
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 104 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGS 104 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhccc
Confidence 67889999999999999999999999887765 488999999999999999999888776543
Q ss_pred ----------------cCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcC----------CCCCCcHHHHHHhcCChHHH
Q psy14007 64 ----------------KADGGHSALQYACSKGWKEIAELLIHNHANVNIQ----------DVRGATPLHRAASQGITPVV 117 (198)
Q Consensus 64 ----------------~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~----------~~~~~~~l~~a~~~~~~~~~ 117 (198)
.+..|.||++.|+..++.+++++|+++|++++.. +..|.||||+|+..|+.+++
T Consensus 105 ~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v 184 (337)
T 4g8k_A 105 VKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVL 184 (337)
T ss_dssp HHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHH
T ss_pred chhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHH
Confidence 3445677777777777777777777777665543 23466777777777777776
Q ss_pred HHHHhc-cC-----------------------------------CCCcccCCCCCCCHHHHHHHhCChhhHHHHHHc-CC
Q psy14007 118 KLLLTQ-RL-----------------------------------DIDVNITDAYGNTPLHYACEEKRLTDAKLLVRC-GA 160 (198)
Q Consensus 118 ~~l~~~-~~-----------------------------------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-g~ 160 (198)
++|+++ +. |.+++.++..|.||||.|+..++.+++++|++. |+
T Consensus 185 ~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~ 264 (337)
T 4g8k_A 185 KILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHI 264 (337)
T ss_dssp HHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTC
T ss_pred HHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCC
Confidence 666642 11 345566677788888888888888888888874 78
Q ss_pred CcceecCCCCCccccCCChhHHHHHhhhcccccCCC
Q psy14007 161 RLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGDLP 196 (198)
Q Consensus 161 ~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~~~ 196 (198)
+++.+|..|.||||+|+..|+.++++.|.+.++++.
T Consensus 265 ~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n 300 (337)
T 4g8k_A 265 EINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 300 (337)
T ss_dssp CTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSST
T ss_pred cccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 888888899999999999999999999888887764
No 39
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.9e-38 Score=233.87 Aligned_cols=175 Identities=31% Similarity=0.375 Sum_probs=165.6
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccC---------------
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKA--------------- 65 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~--------------- 65 (198)
+|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 90 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~ 169 (351)
T 3utm_A 90 GGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPEL 169 (351)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHH
T ss_pred CCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhh
Confidence 48999999999999999999999999999999999999999999999999999999999876544
Q ss_pred ---------------------------------------CCCCcHHHHHHhc---ChHHHHHHHHhcCCCCCcCCCCCCc
Q psy14007 66 ---------------------------------------DGGHSALQYACSK---GWKEIAELLIHNHANVNIQDVRGAT 103 (198)
Q Consensus 66 ---------------------------------------~~~~t~l~~a~~~---~~~~~~~~l~~~~~~~~~~~~~~~~ 103 (198)
..|.||||.|+.. +..+++++|++.|++++..+..|.|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 249 (351)
T 3utm_A 170 RERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMT 249 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred HHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCC
Confidence 4567999999998 6789999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCC
Q psy14007 104 PLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLP 177 (198)
Q Consensus 104 ~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~ 177 (198)
|||+|+..|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|.
T Consensus 250 ~L~~A~~~g~~~~v~~Ll~~--ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a~ 321 (351)
T 3utm_A 250 PLHVAAERAHNDVMEVLHKH--GAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGN 321 (351)
T ss_dssp HHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHSC
T ss_pred HHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhhh
Confidence 99999999999999999998 6688899999999999999999999999999999999999999999999994
No 40
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=2.5e-39 Score=215.42 Aligned_cols=157 Identities=41% Similarity=0.557 Sum_probs=149.5
Q ss_pred CHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHH
Q psy14007 37 TPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPV 116 (198)
Q Consensus 37 ~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~ 116 (198)
+.|+.||+.|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|++.|++++.++..|.||||+|+..|+.++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhcccccCC
Q psy14007 117 VKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGDL 195 (198)
Q Consensus 117 ~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~~ 195 (198)
+++|+++ |.+++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|+..++.++++.|.+.|+++
T Consensus 86 v~~Ll~~--gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 86 VKLLISK--GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp HHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred HHHHHHC--cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 9999998 6688999999999999999999999999999999999999999999999999999999999999999876
No 41
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=7.1e-39 Score=214.39 Aligned_cols=170 Identities=30% Similarity=0.379 Sum_probs=155.2
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcC
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSP-VDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKG 79 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~-~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~ 79 (198)
++.+|||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..+
T Consensus 1 G~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 1 GDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGG 80 (172)
T ss_dssp ---CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT
T ss_pred CchhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCC
Confidence 467899999999999999999999987 7888999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcC
Q psy14007 80 WKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCG 159 (198)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 159 (198)
+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++ +.+++..+..|.||||+|+..++.+++++|+++|
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLAR--GADLTTEADSGYTPMDLAVALGYRKVQQVIENHI 158 (172)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998 6688899999999999999999999999999999
Q ss_pred CCcceecCCCCCc
Q psy14007 160 ARLDIQNKEKKTP 172 (198)
Q Consensus 160 ~~~~~~~~~g~t~ 172 (198)
+++..++..|.||
T Consensus 159 ~~~~~~~~~~~~p 171 (172)
T 3v30_A 159 LKLFQSNLVPADP 171 (172)
T ss_dssp HHHSCC-------
T ss_pred HHHhcccCCCCCC
Confidence 9999988888887
No 42
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=1.6e-40 Score=236.14 Aligned_cols=194 Identities=24% Similarity=0.257 Sum_probs=172.5
Q ss_pred cchhHHHHHhcCcHHH----HHHHHhCCCCCCCCC----CCCCCHHHHHH---HcCCHHHHHHHHhcCCC----------
Q psy14007 2 ERLLIHWAALSGREDV----VDFLLKNKSPVDPKD----DTNRTPLILAA---AAGKLEIVRLLISNGAD---------- 60 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~----~~~l~~~~~~~~~~~----~~g~~~L~~A~---~~~~~~~~~~L~~~~~~---------- 60 (198)
|+++||.|+..|+.+. ++++++.|.+++..+ ..|.||||+|+ +.|+.+++++|++.|++
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 84 (260)
T 3jxi_A 5 NRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINS 84 (260)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTC
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcc
Confidence 6899999999999995 455555899888665 67999999999 67999999999998643
Q ss_pred -ccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCC--------------CCCCcHHHHHHhcCChHHHHHHHhcc-
Q psy14007 61 -VNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQD--------------VRGATPLHRAASQGITPVVKLLLTQR- 124 (198)
Q Consensus 61 -~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~--------------~~~~~~l~~a~~~~~~~~~~~l~~~~- 124 (198)
.+..+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.+
T Consensus 85 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 164 (260)
T 3jxi_A 85 PFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGH 164 (260)
T ss_dssp CBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred cccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 34445589999999999999999999999999999988 58999999999999999999999932
Q ss_pred CCCCcccCCCCCCCHHHHHHHhCC---------hhhHHHHHHcCCCc-------ceecCCCCCccccCCChhHHHHHhhh
Q psy14007 125 LDIDVNITDAYGNTPLHYACEEKR---------LTDAKLLVRCGARL-------DIQNKEKKTPLDLLPLPHLAQALTEI 188 (198)
Q Consensus 125 ~~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~Ll~~g~~~-------~~~~~~g~t~~~~a~~~~~~~~~~~l 188 (198)
.+.+++..|..|.||||+|+..++ .+++++|+++|+++ +.+|..|.||+|+|+..++.++++.|
T Consensus 165 ~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~L 244 (260)
T 3jxi_A 165 KQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHI 244 (260)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHH
Confidence 377899999999999999999887 69999999999998 78999999999999999999999999
Q ss_pred cccccCC
Q psy14007 189 EPIVGDL 195 (198)
Q Consensus 189 ~~~~~~~ 195 (198)
.+.+.+.
T Consensus 245 l~~g~~~ 251 (260)
T 3jxi_A 245 IRREIAD 251 (260)
T ss_dssp HHHHHHH
T ss_pred HHhCCCc
Confidence 9877653
No 43
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=3.3e-39 Score=232.20 Aligned_cols=187 Identities=17% Similarity=0.127 Sum_probs=172.8
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCC-CcHHHHHHhcC
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGG-HSALQYACSKG 79 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~-~t~l~~a~~~~ 79 (198)
+|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..| .||||+|+..|
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~ 140 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLN 140 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999 89999999999
Q ss_pred hHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCH-HHHHHHhCChhhHHHHHHc
Q psy14007 80 WKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTP-LHYACEEKRLTDAKLLVRC 158 (198)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~-l~~a~~~~~~~~~~~Ll~~ 158 (198)
+.+++++|+++|++.... ..|.||||+|+..|+.+++++|+++ |.+++..+..|.|| ||+|+..++.+++++|+++
T Consensus 141 ~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~--gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~ 217 (285)
T 3kea_A 141 DVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDY--MTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKY 217 (285)
T ss_dssp CHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHH--HHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTS
T ss_pred CHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHc--CCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHc
Confidence 999999999999876322 2789999999999999999999998 66888999999998 9999999999999999999
Q ss_pred CCCcceecCCCCCccccCCChhHHHHHhhhcccccCCCC
Q psy14007 159 GARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGDLPE 197 (198)
Q Consensus 159 g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~~~~ 197 (198)
|++++..+. .|+..++.++++.|.+.+.++..
T Consensus 218 gad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~~~~ 249 (285)
T 3kea_A 218 DINIYSANL-------ENVLLDDAEIAKMIIEKHVEYKS 249 (285)
T ss_dssp CBCSTTTTG-------GGGTTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCh-------hhhhcCCHHHHHHHHHcCCCCCC
Confidence 999988873 56778999999999988876543
No 44
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=2.2e-38 Score=222.06 Aligned_cols=179 Identities=25% Similarity=0.286 Sum_probs=165.3
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC------ccccCCCCCcHHHH
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGAD------VNAKADGGHSALQY 74 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~------~~~~~~~~~t~l~~ 74 (198)
+|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+
T Consensus 44 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~ 123 (236)
T 1ikn_D 44 LQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHL 123 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHH
Confidence 488999999999999999999999999999999999999999999999999999999875 45677889999999
Q ss_pred HHhcChHHHHHHHHhcCCCCCcCCC-CCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHH
Q psy14007 75 ACSKGWKEIAELLIHNHANVNIQDV-RGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAK 153 (198)
Q Consensus 75 a~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 153 (198)
|+..++.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+++ |.+++..+..|.||||+|+..++.++++
T Consensus 124 A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~tpl~~A~~~~~~~~~~ 201 (236)
T 1ikn_D 124 ASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKC--GADVNRVTYQGYSPYQLTWGRPSTRIQQ 201 (236)
T ss_dssp HHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTT--TCCSCCCCTTCCCGGGGCTTSSCHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCcccCCCCCHHHHHHccCchHHHH
Confidence 9999999999999999999999997 999999999999999999999998 6788899999999999999999999999
Q ss_pred HHHHcCCCcc--eecCCCCCccccCCChhH
Q psy14007 154 LLVRCGARLD--IQNKEKKTPLDLLPLPHL 181 (198)
Q Consensus 154 ~Ll~~g~~~~--~~~~~g~t~~~~a~~~~~ 181 (198)
+|+++|++.. .++..|.||.+.+.....
T Consensus 202 ~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~ 231 (236)
T 1ikn_D 202 QLGQLTLENLQMLPESEDEESYDTESEFTE 231 (236)
T ss_dssp HHHTTSCGGGSSCCCCCTTTCCCCC-----
T ss_pred HHHHcchhhhhcCCccchHHHHhhhccccc
Confidence 9999999876 888899999999876543
No 45
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=6.3e-39 Score=222.92 Aligned_cols=182 Identities=25% Similarity=0.347 Sum_probs=170.9
Q ss_pred CcHHHHHHHHhCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhcC
Q psy14007 13 GREDVVDFLLKNKSPVDPK-DDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNH 91 (198)
Q Consensus 13 g~~~~~~~l~~~~~~~~~~-~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~ 91 (198)
|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|++.+
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 81 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 81 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 6788999999999998865 789999999999999999999999999999999999999999999999999999999998
Q ss_pred C-CCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCC
Q psy14007 92 A-NVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKK 170 (198)
Q Consensus 92 ~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 170 (198)
. +++..+..+.||||+|+..++.+++++|+++ +.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.
T Consensus 82 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 159 (223)
T 2f8y_A 82 ATDLDARMHDGTTPLILAARLAVEGMLEDLINS--HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREE 159 (223)
T ss_dssp TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHc--CCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCc
Confidence 7 8888899999999999999999999999997 667888999999999999999999999999999999999999999
Q ss_pred CccccCCChhHHHHHhhhcccccCCC
Q psy14007 171 TPLDLLPLPHLAQALTEIEPIVGDLP 196 (198)
Q Consensus 171 t~~~~a~~~~~~~~~~~l~~~~~~~~ 196 (198)
||+|+|+..++.++++.|.+.+.++.
T Consensus 160 t~L~~A~~~~~~~~v~~Ll~~ga~~~ 185 (223)
T 2f8y_A 160 TPLFLAAREGSYETAKVLLDHFANRD 185 (223)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 99999999999999999999988764
No 46
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=1.2e-37 Score=207.38 Aligned_cols=160 Identities=29% Similarity=0.406 Sum_probs=153.2
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
+|.||||.|+..|+.+++++|++.+.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||.|+..++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCC
Q psy14007 81 KEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGA 160 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~ 160 (198)
.+++++|+++|++++..+..|.||||+|+..++.+++++|+++ +.+++..+..|.||||+|+..|+.+++++|+++++
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLES--GADPTIETDSGYNSMDLAVALGYRSVQQVIESHLL 159 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999997 66888899999999999999999999999999876
Q ss_pred Cc
Q psy14007 161 RL 162 (198)
Q Consensus 161 ~~ 162 (198)
++
T Consensus 160 ~~ 161 (167)
T 3v31_A 160 KL 161 (167)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 47
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=1.6e-37 Score=205.82 Aligned_cols=157 Identities=29% Similarity=0.347 Sum_probs=149.0
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChH
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWK 81 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~ 81 (198)
..+|||.|+..|+.+++++|+++|++++..+..|.||||+|+. ++.+++++|+++|++++.++..|.||||.|+..++.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 83 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFL 83 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 5689999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCC-cccCCCCCCCHHHHHHHhCChhhHHHHHHcCC
Q psy14007 82 EIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDID-VNITDAYGNTPLHYACEEKRLTDAKLLVRCGA 160 (198)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~ 160 (198)
+++++|+++|++++..+..|.||||+|++.|+.+++++|++++ .+ ++..+..|.||||+|+..++.+++++|+++|+
T Consensus 84 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 84 DTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT--ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS--CCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcc--CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999984 34 57889999999999999999999999999998
Q ss_pred C
Q psy14007 161 R 161 (198)
Q Consensus 161 ~ 161 (198)
|
T Consensus 162 d 162 (162)
T 1ihb_A 162 G 162 (162)
T ss_dssp -
T ss_pred C
Confidence 6
No 48
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=4.6e-37 Score=205.06 Aligned_cols=156 Identities=39% Similarity=0.532 Sum_probs=146.1
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChH
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWK 81 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~ 81 (198)
+.++|++|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 93 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHL 93 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcC
Q psy14007 82 EIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCG 159 (198)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 159 (198)
+++++|+++|++++..+..|.||||+|+..++.+++++|+++ +.+++..|..|.||||+|+..++.+++++|+++|
T Consensus 94 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 94 EIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKN--GADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999998 6678888999999999999999999999999876
No 49
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=6.5e-39 Score=229.65 Aligned_cols=190 Identities=21% Similarity=0.210 Sum_probs=178.8
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCC-CccccCCCCCcHHHHHH--
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKSP--VDPKDDTNRTPLILAAAAGKLEIVRLLISNGA-DVNAKADGGHSALQYAC-- 76 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~~--~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~-~~~~~~~~~~t~l~~a~-- 76 (198)
+++++|.|+..|+.+.++.+++.+.+ ++..|..|.||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~ 155 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALA 155 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGC
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHH
Confidence 35788999999999999999988765 78899999999999999999999999999998 89999999999999999
Q ss_pred ---hcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHH
Q psy14007 77 ---SKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAK 153 (198)
Q Consensus 77 ---~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 153 (198)
..++.+++++|++.|...+..+..|.||||+|+..|+.+++++|+++ |.+++..|..|.||||+|+..|+.++++
T Consensus 156 ~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~--gad~n~~d~~G~TpLh~A~~~g~~~iv~ 233 (276)
T 4hbd_A 156 TLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLAC--EADVNVQDDDGSTALMCACEHGHKEIAG 233 (276)
T ss_dssp CCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhC--CCCCCCCCCCCCCHHHHHHHCCCHHHHH
Confidence 67899999999999999999999999999999999999999999998 6688899999999999999999999999
Q ss_pred HHHH-cCCCcceecCCCCCccccCCChhHHHHHhhhccccc
Q psy14007 154 LLVR-CGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVG 193 (198)
Q Consensus 154 ~Ll~-~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~ 193 (198)
+|++ .|++++.+|..|.||+++|+..++.++++.|.+...
T Consensus 234 ~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 234 LLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp HHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred HHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 9999 899999999999999999999999999999987653
No 50
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=4.4e-38 Score=230.37 Aligned_cols=169 Identities=17% Similarity=0.165 Sum_probs=102.5
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC---HHHHHHHHhcC-CCccccCCCCCcHHHHHHh
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGK---LEIVRLLISNG-ADVNAKADGGHSALQYACS 77 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~---~~~~~~L~~~~-~~~~~~~~~~~t~l~~a~~ 77 (198)
|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+ .++++.|++.+ .+++.++..|.||||+|+.
T Consensus 131 g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~ 210 (327)
T 1sw6_A 131 GNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIII 210 (327)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHH
Confidence 4555555555555555555555555555555555555555555554 44444444443 3444555555555555555
Q ss_pred ----cChHHHHHHHHhc--------------------CCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCC
Q psy14007 78 ----KGWKEIAELLIHN--------------------HANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITD 133 (198)
Q Consensus 78 ----~~~~~~~~~l~~~--------------------~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~ 133 (198)
.++.+++++|++. |++++..+..|.||||.|+. +++|+++ +++..|
T Consensus 211 ~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~----~~n~~d 280 (327)
T 1sw6_A 211 TSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN----MLNAQD 280 (327)
T ss_dssp HHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH----TTTCCC
T ss_pred HccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh----CCCCCC
Confidence 4555555555443 44555555555555555543 4445543 477889
Q ss_pred CCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChh
Q psy14007 134 AYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPH 180 (198)
Q Consensus 134 ~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~ 180 (198)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||+|+|+..|
T Consensus 281 ~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 281 SNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp TTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999764
No 51
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=2e-37 Score=210.85 Aligned_cols=163 Identities=26% Similarity=0.303 Sum_probs=136.4
Q ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHH
Q psy14007 28 VDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHR 107 (198)
Q Consensus 28 ~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 107 (198)
++..+..|.||||+|+..|+.+++++|++.+++++.++..|.||||+|+..++.+++++|++.|++++..+..|.||||+
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 107 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMW 107 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence 45577788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhh
Q psy14007 108 AASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTE 187 (198)
Q Consensus 108 a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~ 187 (198)
|+..++.+++++|+++ +.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||+++|+..++.++++.
T Consensus 108 A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~ 185 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEH--GANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKI 185 (192)
T ss_dssp HHHHTCHHHHHHHHHT--TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHH
Confidence 8888888888888887 55777788888888888888888888888888888888888888888888888888888888
Q ss_pred hcccc
Q psy14007 188 IEPIV 192 (198)
Q Consensus 188 l~~~~ 192 (198)
|.+.+
T Consensus 186 Ll~~~ 190 (192)
T 2rfm_A 186 FTEVR 190 (192)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 77654
No 52
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=3.7e-37 Score=226.34 Aligned_cols=190 Identities=29% Similarity=0.302 Sum_probs=172.5
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCC----------CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCccccCCCCC
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPK----------DDTNRTPLILAAAAGKLEIVRLLIS-NGADVNAKADGGH 69 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~----------~~~g~~~L~~A~~~~~~~~~~~L~~-~~~~~~~~~~~~~ 69 (198)
+|+||||+|+..|+.+++++++++|++++.. +..|.||||+|++.|+.+++++|++ .|++++.++..|.
T Consensus 124 ~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~ 203 (337)
T 4g8k_A 124 YGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR 203 (337)
T ss_dssp TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCC
Confidence 4889999999999999999999999887643 4468999999999999999999996 5999999999999
Q ss_pred cHHHHHHhcCh----HHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHH
Q psy14007 70 SALQYACSKGW----KEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACE 145 (198)
Q Consensus 70 t~l~~a~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~ 145 (198)
|+++.++..+. .+++++|+++|++++.++..|.||||+|+..|+.++++.|++.. +.+++..|..|.||||+|+.
T Consensus 204 t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~-~~~vn~~d~~G~TpL~~A~~ 282 (337)
T 4g8k_A 204 NALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE-HIEINDTDSDGKTALLLAVE 282 (337)
T ss_dssp CHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTST-TCCTTCBCTTSCBHHHHHHH
T ss_pred cHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhc-CCcccCcCCCCCCHHHHHHH
Confidence 99998776433 56889999999999999999999999999999999999999853 67899999999999999999
Q ss_pred hCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhcccccCCC
Q psy14007 146 EKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGDLP 196 (198)
Q Consensus 146 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~~~ 196 (198)
.|+.+++++|+++|++++. .+|+++|+..++.++++.|++.|+++.
T Consensus 283 ~g~~~iv~~Ll~~GAd~n~-----~~~L~~A~~~~~~~iv~~Ll~~GA~~d 328 (337)
T 4g8k_A 283 LKLKKIAELLCKRGASTDC-----GDLVMTARRNYDHSLVKVLLSHGAKED 328 (337)
T ss_dssp TTCHHHHHHHHTTSCSSTT-----CCHHHHHHHTTCHHHHHHHHHTTCCC-
T ss_pred cCCHHHHHHHHHCCCCCCC-----CCHHHHHHHcCCHHHHHHHHHCcCCCC
Confidence 9999999999999999864 469999999999999999999998763
No 53
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.2e-37 Score=231.15 Aligned_cols=189 Identities=20% Similarity=0.214 Sum_probs=163.6
Q ss_pred cchhHHHHHhcCcHHHHHHHHhC----CCCCCC-----------------CCCCCCCHHHHHHHcC--CHHHHHHHHhcC
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKN----KSPVDP-----------------KDDTNRTPLILAAAAG--KLEIVRLLISNG 58 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~----~~~~~~-----------------~~~~g~~~L~~A~~~~--~~~~~~~L~~~~ 58 (198)
|+||||+|+..|+.+++++|++. |.+++. .+..|.||||+|+..| +.+++++|++.|
T Consensus 84 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~g 163 (364)
T 3ljn_A 84 GQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLG 163 (364)
T ss_dssp TBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcC
Confidence 45556666666666666666555 444433 7778999999999999 999999999999
Q ss_pred CCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCC-----CCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCC
Q psy14007 59 ADVNAKADGGHSALQYACSKGWKEIAELLIHNHAN-----VNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITD 133 (198)
Q Consensus 59 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~ 133 (198)
++++.++..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|+++ |.+++..|
T Consensus 164 a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--gad~~~~d 241 (364)
T 3ljn_A 164 ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEM--GIDVNMED 241 (364)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTT--TCCTTCCC
T ss_pred CCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCCCCC
Confidence 99999999999999999999999999999999998 999999999999999999999999999998 66889999
Q ss_pred CCCCCHHHHHHHhCChhhHHHHHHcCCCcce------------ecCCCCCccccCCChhHHHHHhhhcccc
Q psy14007 134 AYGNTPLHYACEEKRLTDAKLLVRCGARLDI------------QNKEKKTPLDLLPLPHLAQALTEIEPIV 192 (198)
Q Consensus 134 ~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~------------~~~~g~t~~~~a~~~~~~~~~~~l~~~~ 192 (198)
..|.||||+|+..|+.+++++|+++|++++. .+..+.+|++.|+..+..+.+..+.+..
T Consensus 242 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~~ 312 (364)
T 3ljn_A 242 NEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEK 312 (364)
T ss_dssp TTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHHHH
Confidence 9999999999999999999999999877533 5667899999999999887777765543
No 54
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=8.7e-36 Score=203.97 Aligned_cols=157 Identities=23% Similarity=0.350 Sum_probs=150.0
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-hcCCCccccCCCCCcHHHHHHhcC
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLI-SNGADVNAKADGGHSALQYACSKG 79 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~-~~~~~~~~~~~~~~t~l~~a~~~~ 79 (198)
+|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+ ..+.+++..+..|.||||.|+..+
T Consensus 38 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 117 (201)
T 3hra_A 38 EGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKG 117 (201)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcC
Confidence 5889999999999999999999999999999999999999999999999999999 467789999999999999999999
Q ss_pred hHHHHHHHHhcC-CCCCcCCCCCCcHHHHHHhcCC-----hHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHH
Q psy14007 80 WKEIAELLIHNH-ANVNIQDVRGATPLHRAASQGI-----TPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAK 153 (198)
Q Consensus 80 ~~~~~~~l~~~~-~~~~~~~~~~~~~l~~a~~~~~-----~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 153 (198)
+.+++++|++.| .+++..+..|.||||+|+..++ .+++++|+++ |.+++..|..|.||||+|+..++.++++
T Consensus 118 ~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~l~~A~~~~~~~~~~ 195 (201)
T 3hra_A 118 HIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMEN--GADQSIKDNSGRTAMDYANQKGYTEISK 195 (201)
T ss_dssp CHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred CHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHC--CCCCCccCCCCCCHHHHHHHcCCHhHHH
Confidence 999999999999 8999999999999999999998 8999999998 6688899999999999999999999999
Q ss_pred HHHHcC
Q psy14007 154 LLVRCG 159 (198)
Q Consensus 154 ~Ll~~g 159 (198)
+|+++|
T Consensus 196 ~Ll~~G 201 (201)
T 3hra_A 196 ILAQYN 201 (201)
T ss_dssp HHHTCC
T ss_pred HHHhcC
Confidence 999987
No 55
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=6.2e-37 Score=208.41 Aligned_cols=157 Identities=30% Similarity=0.379 Sum_probs=152.0
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
+|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++
T Consensus 34 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 113 (192)
T 2rfm_A 34 YNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGY 113 (192)
T ss_dssp TCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcC
Q psy14007 81 KEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCG 159 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 159 (198)
.+++++|+++|++++..+..|.||||+|+..++.+++++|+++ +.+++..+..|.||+|+|+..++.+++++|+++|
T Consensus 114 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 114 SEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLEL--GADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999998 6688899999999999999999999999999864
No 56
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=3.1e-36 Score=202.83 Aligned_cols=166 Identities=26% Similarity=0.346 Sum_probs=146.5
Q ss_pred cchhHHHHHhcCcHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKN-KSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~-~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
+.++|+.|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 84 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGH 84 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 56889999999999999999987 56788888999999999999999999999999999999889999999999999999
Q ss_pred HHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCC
Q psy14007 81 KEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGA 160 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~ 160 (198)
.+++++|+++|++++..+..|.||||+|+..++.+++++|+++ +.+++..+..|.|||++|+..++.+++++|+++|+
T Consensus 85 ~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~ 162 (179)
T 3f6q_A 85 RDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVAN--GALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQ 162 (179)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999987 56788888899999999999999999999999999
Q ss_pred CcceecCCC
Q psy14007 161 RLDIQNKEK 169 (198)
Q Consensus 161 ~~~~~~~~g 169 (198)
+++..+..+
T Consensus 163 ~~~~~~~~~ 171 (179)
T 3f6q_A 163 NLNRIPYKD 171 (179)
T ss_dssp CCSCBCCCC
T ss_pred CcccCCccc
Confidence 887665443
No 57
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=8.3e-36 Score=195.86 Aligned_cols=152 Identities=28% Similarity=0.393 Sum_probs=141.9
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
|..++|+.|+..|+.+++++|++.|.+++ .+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++
T Consensus 1 d~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 1 DLGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh
Confidence 46789999999999999999999998876 57889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHH
Q psy14007 81 KEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLL 155 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 155 (198)
.+++++|+++|++++..+..|.||||+|+..++.+++++|+++ +.+++..+..|.||||+|+..|+.+++++|
T Consensus 80 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 80 ANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY--GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999999999999999999999999999998 668888999999999999999999999887
No 58
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=5.3e-36 Score=209.37 Aligned_cols=164 Identities=26% Similarity=0.302 Sum_probs=148.6
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCC-----CCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCC---------
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPV-----DPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKAD--------- 66 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~-----~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~--------- 66 (198)
+|+||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+.+++++|+++|++++.++.
T Consensus 36 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~ 115 (232)
T 2rfa_A 36 MGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115 (232)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeeccc
Confidence 5899999999999999999999999876 66778999999999999999999999999999887765
Q ss_pred ----CCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHH----HHHHhccCCCCc------ccC
Q psy14007 67 ----GGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVV----KLLLTQRLDIDV------NIT 132 (198)
Q Consensus 67 ----~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~----~~l~~~~~~~~~------~~~ 132 (198)
.|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++ ++|++.+. +. +..
T Consensus 116 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~--~~~~~~~~~~~ 193 (232)
T 2rfa_A 116 NLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDG--GDHLKSLELVP 193 (232)
T ss_dssp CSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTC--SCSSCCGGGCC
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCC--chhhhhhhccC
Confidence 799999999999999999999999999999999999999999999999988 99998854 44 578
Q ss_pred CCCCCCHHHHHHHhCChhhHHHHHHcCCCcceec
Q psy14007 133 DAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQN 166 (198)
Q Consensus 133 ~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 166 (198)
|..|.||||+|+..|+.+++++|+++|.......
T Consensus 194 ~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~~~ 227 (232)
T 2rfa_A 194 NNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAAAH 227 (232)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHHHHHC----
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcCccchhhh
Confidence 8999999999999999999999999987654443
No 59
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=2e-36 Score=216.42 Aligned_cols=172 Identities=23% Similarity=0.298 Sum_probs=145.0
Q ss_pred CcchhHHHHHhc---CcHHHHHHHHhCCCCC-----------CCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCC
Q psy14007 1 NERLLIHWAALS---GREDVVDFLLKNKSPV-----------DPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKAD 66 (198)
Q Consensus 1 ~g~~~L~~A~~~---g~~~~~~~l~~~~~~~-----------~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~ 66 (198)
+|+||||+|+.. |+.+++++|+++|+++ ...+..|.||||+|+..|+.+++++|+++|++++.++.
T Consensus 53 ~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 132 (273)
T 2pnn_A 53 TGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAAN 132 (273)
T ss_dssp TCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBC
T ss_pred CCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccc
Confidence 489999999987 9999999999987542 22566899999999999999999999999999998886
Q ss_pred --------------CCCcHHHHHHhcChHHHHHHHHh---cCCCCCcCCCCCCcHHHHHHhcCC---------hHHHHHH
Q psy14007 67 --------------GGHSALQYACSKGWKEIAELLIH---NHANVNIQDVRGATPLHRAASQGI---------TPVVKLL 120 (198)
Q Consensus 67 --------------~~~t~l~~a~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~l~~a~~~~~---------~~~~~~l 120 (198)
.|.||||+|+..|+.+++++|++ .|++++.++..|.||||+|+..++ .+++++|
T Consensus 133 ~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~L 212 (273)
T 2pnn_A 133 GDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEI 212 (273)
T ss_dssp SGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHH
Confidence 79999999999999999999999 999999999999999999999888 7899999
Q ss_pred HhccCCCCcc-------cCCCCCCCHHHHHHHhCChhhHHHHHHcCC-CcceecCCCCCccc
Q psy14007 121 LTQRLDIDVN-------ITDAYGNTPLHYACEEKRLTDAKLLVRCGA-RLDIQNKEKKTPLD 174 (198)
Q Consensus 121 ~~~~~~~~~~-------~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~~~ 174 (198)
++++ .+++ ..|..|.||||+|+..|+.+++++|+++|+ |+......+.+|.+
T Consensus 213 l~~g--a~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 213 LILG--AKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp HHHH--HHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--------------
T ss_pred HHhh--hhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhccC
Confidence 9984 4554 589999999999999999999999999999 78777777766643
No 60
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=1.5e-36 Score=202.16 Aligned_cols=161 Identities=27% Similarity=0.341 Sum_probs=153.8
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCC
Q psy14007 34 TNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGI 113 (198)
Q Consensus 34 ~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~ 113 (198)
.|.||||.|+..|+.+++++|++.+.+++.++..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhccccc
Q psy14007 114 TPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVG 193 (198)
Q Consensus 114 ~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~ 193 (198)
.+++++|+++ +.+++..+..|.||||.|+..++.+++++|+++|++++.++..|.||+++|+..++.++++.|.+.+.
T Consensus 82 ~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (167)
T 3v31_A 82 TDIVKMLLDC--GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLL 159 (167)
T ss_dssp HHHHHHHHHH--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHC--CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHH
Confidence 9999999998 66888999999999999999999999999999999999999999999999999999999999988776
Q ss_pred CCC
Q psy14007 194 DLP 196 (198)
Q Consensus 194 ~~~ 196 (198)
++-
T Consensus 160 ~~~ 162 (167)
T 3v31_A 160 KLL 162 (167)
T ss_dssp HHC
T ss_pred HHH
Confidence 543
No 61
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.6e-39 Score=224.45 Aligned_cols=182 Identities=21% Similarity=0.215 Sum_probs=166.0
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
+|.+|||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~ 99 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCND 99 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcCC-CCCCcHHHHH--HhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHH
Q psy14007 81 KEIAELLIHNHANVNIQD-VRGATPLHRA--ASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVR 157 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~-~~~~~~l~~a--~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 157 (198)
.+++++|++.|++++..+ ..|.||||+| +..++.+++++|++. |.+++..+..|.||++.++... ..++|++
T Consensus 100 ~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~--ga~~~~~~~~~~~~l~~~~~~~---~~~~ll~ 174 (229)
T 2vge_A 100 TVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADV--EQSMGLMNSGAVYALWDYSAEF---GDELSFR 174 (229)
T ss_dssp HHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHH--HHHTTTSGGGEEEESSCBCCSS---TTBCCBC
T ss_pred HHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHc--CCCcccccCCchHHHHHHhhcc---ccccCcc
Confidence 999999999999999986 6999999999 999999999999998 5578888888889988655543 3356788
Q ss_pred cCCC--cceecCCCCCccccCCChhHHHHHhh
Q psy14007 158 CGAR--LDIQNKEKKTPLDLLPLPHLAQALTE 187 (198)
Q Consensus 158 ~g~~--~~~~~~~g~t~~~~a~~~~~~~~~~~ 187 (198)
.|++ ++.+|..|.||+|+|+..|+.++++.
T Consensus 175 ~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~ 206 (229)
T 2vge_A 175 EGESVTVLRRDGPEETDWWWAALHGQEGYVPR 206 (229)
T ss_dssp TTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred ccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence 8988 67788899999999999999998876
No 62
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=8.6e-36 Score=198.08 Aligned_cols=154 Identities=29% Similarity=0.380 Sum_probs=75.4
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhc-CCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCC
Q psy14007 35 NRTPLILAAAAGKLEIVRLLISN-GADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGI 113 (198)
Q Consensus 35 g~~~L~~A~~~~~~~~~~~L~~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~ 113 (198)
|.++|+.|++.|+.+++++|++. +.+++..+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..++
T Consensus 8 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 87 (165)
T 3twr_A 8 ADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGH 87 (165)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred hhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCc
Confidence 34444444444444444444442 22333333444444444444444444444444444444444444445555555455
Q ss_pred hHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhccc
Q psy14007 114 TPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPI 191 (198)
Q Consensus 114 ~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~ 191 (198)
.+++++|+++ +.+++..+..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|.. ++.++++.|...
T Consensus 88 ~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~ 162 (165)
T 3twr_A 88 YEVAELLVKH--GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGD 162 (165)
T ss_dssp HHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC
T ss_pred HHHHHHHHhC--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhc
Confidence 5555555444 33444455555555555555555555555555555555555555555555544 444555555444
No 63
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=6.4e-36 Score=199.50 Aligned_cols=159 Identities=36% Similarity=0.448 Sum_probs=150.7
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhc
Q psy14007 32 DDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQ 111 (198)
Q Consensus 32 ~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~ 111 (198)
...+.++|+.|++.|+.+++++|+++|++++.++..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 90 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALF 90 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 44567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhccc
Q psy14007 112 GITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPI 191 (198)
Q Consensus 112 ~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~ 191 (198)
++.+++++|+++ +.+++..+..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+..++.++++.|.++
T Consensus 91 ~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 91 GHLEIVEVLLKN--GADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred CCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 999999999998 668888999999999999999999999999999999999999999999999999999999999876
Q ss_pred c
Q psy14007 192 V 192 (198)
Q Consensus 192 ~ 192 (198)
+
T Consensus 169 G 169 (169)
T 2y1l_E 169 N 169 (169)
T ss_dssp -
T ss_pred C
Confidence 4
No 64
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=100.00 E-value=7.7e-35 Score=191.75 Aligned_cols=153 Identities=28% Similarity=0.340 Sum_probs=145.3
Q ss_pred cchhHHHHHhcCcHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKN-KSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~-~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
|.++||+|+..|+.+++++|++. +.+++..+..|.||||+ +..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 67899999999999999999998 34889999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHc
Q psy14007 81 KEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRC 158 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 158 (198)
.+++++|+++|++++..+..|.||||+|+..|+.+++++|++. .+++..+..|.||||+|+..++.+++++|+++
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE---SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT---SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc---cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999986 47888999999999999999999999999874
No 65
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=9e-35 Score=195.64 Aligned_cols=163 Identities=33% Similarity=0.437 Sum_probs=152.6
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHhc-CCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhc
Q psy14007 33 DTNRTPLILAAAAGKLEIVRLLISN-GADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQ 111 (198)
Q Consensus 33 ~~g~~~L~~A~~~~~~~~~~~L~~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~ 111 (198)
..+.++|+.|+..|+.+++++|++. +.+++.++..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 3577899999999999999999997 667888999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhccc
Q psy14007 112 GITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPI 191 (198)
Q Consensus 112 ~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~ 191 (198)
++.+++++|+++ +.+++..|..|.||||+|+..++.+++++|+++|++++.++..|.||+++|+..++.++++.|.+.
T Consensus 83 ~~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~ 160 (179)
T 3f6q_A 83 GHRDIVQKLLQY--KADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKM 160 (179)
T ss_dssp TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 999999999998 668889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCC
Q psy14007 192 VGDLPE 197 (198)
Q Consensus 192 ~~~~~~ 197 (198)
+.+++.
T Consensus 161 g~~~~~ 166 (179)
T 3f6q_A 161 GQNLNR 166 (179)
T ss_dssp TCCCSC
T ss_pred hcCccc
Confidence 988753
No 66
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.1e-35 Score=210.73 Aligned_cols=161 Identities=23% Similarity=0.274 Sum_probs=148.7
Q ss_pred CcchhHHHHHhc---CcHHHHHHHHhCCCCCCCC-----------CCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCC
Q psy14007 1 NERLLIHWAALS---GREDVVDFLLKNKSPVDPK-----------DDTNRTPLILAAAAGKLEIVRLLISNGADVNAKAD 66 (198)
Q Consensus 1 ~g~~~L~~A~~~---g~~~~~~~l~~~~~~~~~~-----------~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~ 66 (198)
+|+||||+|+.. |+.+++++|++.|++++.. +..|.||||+|+..|+.+++++|+++|++++.++.
T Consensus 42 ~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 121 (256)
T 2etb_A 42 TGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRAC 121 (256)
T ss_dssp TTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCC
T ss_pred CCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccc
Confidence 589999999999 9999999999998776533 36799999999999999999999999999998887
Q ss_pred C-------------CCcHHHHHHhcChHHHHHHHHh---cCCCCCcCCCCCCcHHHHHHh--cCChH-------HHHHHH
Q psy14007 67 G-------------GHSALQYACSKGWKEIAELLIH---NHANVNIQDVRGATPLHRAAS--QGITP-------VVKLLL 121 (198)
Q Consensus 67 ~-------------~~t~l~~a~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~l~~a~~--~~~~~-------~~~~l~ 121 (198)
. |.||||+|+..|+.+++++|++ .|++++..+..|.||||+|+. .++.+ ++++|+
T Consensus 122 ~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll 201 (256)
T 2etb_A 122 GRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLL 201 (256)
T ss_dssp SGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHH
Confidence 6 9999999999999999999999 999999999999999999999 78888 999999
Q ss_pred hccCCCCc-------ccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcc
Q psy14007 122 TQRLDIDV-------NITDAYGNTPLHYACEEKRLTDAKLLVRCGARLD 163 (198)
Q Consensus 122 ~~~~~~~~-------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~ 163 (198)
++ |.++ +..|..|.||||+|+..|+.+++++|+++|++..
T Consensus 202 ~~--ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 202 QM--GARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGA 248 (256)
T ss_dssp HH--HHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred Hc--CCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC
Confidence 98 5566 8899999999999999999999999999987654
No 67
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=1e-35 Score=197.10 Aligned_cols=158 Identities=33% Similarity=0.382 Sum_probs=149.5
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCC
Q psy14007 34 TNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGI 113 (198)
Q Consensus 34 ~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~ 113 (198)
...+|||.|+..|+.+++++|+++|++++.++..|.||||+|+. ++.+++++|++.|++++..+..|.||||+|+..++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 45689999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred hHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCC-cceecCCCCCccccCCChhHHHHHhhhcccc
Q psy14007 114 TPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGAR-LDIQNKEKKTPLDLLPLPHLAQALTEIEPIV 192 (198)
Q Consensus 114 ~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~ 192 (198)
.+++++|+++ +.+++..+..|.||||+|+..++.+++++|+++|++ ++.++..|.||+|+|+..++.++++.|.+.+
T Consensus 83 ~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 83 LDTLQTLLEF--QADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp HHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence 9999999998 668889999999999999999999999999999998 5999999999999999999999999999988
Q ss_pred cC
Q psy14007 193 GD 194 (198)
Q Consensus 193 ~~ 194 (198)
++
T Consensus 161 Ad 162 (162)
T 1ihb_A 161 AG 162 (162)
T ss_dssp --
T ss_pred CC
Confidence 64
No 68
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=7.4e-35 Score=208.60 Aligned_cols=157 Identities=28% Similarity=0.374 Sum_probs=150.3
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCC-CCCCCCCCCCCHHHHHH-----HcCCHHHHHHHHhcCCCccccCCCCCcHHHH
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKS-PVDPKDDTNRTPLILAA-----AAGKLEIVRLLISNGADVNAKADGGHSALQY 74 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~-~~~~~~~~g~~~L~~A~-----~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~ 74 (198)
+|+||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+ ..++.+++++|++.|...+..+..|.||||+
T Consensus 110 ~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~ 189 (276)
T 4hbd_A 110 NGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALML 189 (276)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 58999999999999999999999998 99999999999999999 6688999999999999988889999999999
Q ss_pred HHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHh-ccCCCCcccCCCCCCCHHHHHHHhCChhhHH
Q psy14007 75 ACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLT-QRLDIDVNITDAYGNTPLHYACEEKRLTDAK 153 (198)
Q Consensus 75 a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~-~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 153 (198)
|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++ . +.+++..|..|.||||+|+..|+.++++
T Consensus 190 A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~--gad~~~~d~~g~TpL~~A~~~g~~~iv~ 267 (276)
T 4hbd_A 190 AVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVP--SCDISLTDRDGSTALMVALDAGQSEIAS 267 (276)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTST--TCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcC--CCCCcCcCCCCCCHHHHHHHcCCHHHHH
Confidence 999999999999999999999999999999999999999999999998 5 7788999999999999999999999999
Q ss_pred HHHHcC
Q psy14007 154 LLVRCG 159 (198)
Q Consensus 154 ~Ll~~g 159 (198)
+|++++
T Consensus 268 ~Ll~~~ 273 (276)
T 4hbd_A 268 MLYSRM 273 (276)
T ss_dssp HHHHHC
T ss_pred HHHhcc
Confidence 999874
No 69
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=100.00 E-value=4.5e-36 Score=210.77 Aligned_cols=178 Identities=21% Similarity=0.182 Sum_probs=135.0
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
.|.||||.|+..|+.++++.|+++|++++.. ..|.||||.|+..|+.+++++|++.|++++.++..|.||||+|+..|+
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~ 82 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGH 82 (239)
T ss_dssp ----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTC
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 4899999999999999999999999998864 778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCC-CHHHHH--HHhCChhhHHHHHH
Q psy14007 81 KEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGN-TPLHYA--CEEKRLTDAKLLVR 157 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~-t~l~~a--~~~~~~~~~~~Ll~ 157 (198)
.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++ +.+++..+..|. ||||.| +..|+.+++++|++
T Consensus 83 ~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~ 160 (239)
T 1ycs_B 83 TEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVES--GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG 160 (239)
T ss_dssp HHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCcceecCCCCcchHHHHHHhhhccHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 668888887776 999999 78899999999999
Q ss_pred cCCCccee---------cCCCCCccccCCChhH
Q psy14007 158 CGARLDIQ---------NKEKKTPLDLLPLPHL 181 (198)
Q Consensus 158 ~g~~~~~~---------~~~g~t~~~~a~~~~~ 181 (198)
+|++++.. +..+.++.+++...|.
T Consensus 161 ~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 161 VQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred hhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 99887665 5568899999988775
No 70
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=1e-34 Score=192.88 Aligned_cols=156 Identities=35% Similarity=0.444 Sum_probs=146.5
Q ss_pred cchhHHHHHhcCcHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 2 ERLLIHWAALSGREDVVDFLLK-NKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~-~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
|.++|+.|+..|+.+++++|++ .+.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++
T Consensus 8 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 87 (165)
T 3twr_A 8 ADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGH 87 (165)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred hhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCc
Confidence 6799999999999999999998 456777888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCC
Q psy14007 81 KEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGA 160 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~ 160 (198)
.+++++|+++|++++..+..|.||||+|+..++.+++++|+++ +.+++..|..|.||||+|+. ++.+++++|+++|+
T Consensus 88 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 88 YEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQH--GADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999998 66888999999999999777 89999999999886
No 71
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=2.2e-35 Score=197.35 Aligned_cols=160 Identities=28% Similarity=0.367 Sum_probs=150.7
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhcCCC-ccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCC
Q psy14007 35 NRTPLILAAAAGKLEIVRLLISNGAD-VNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGI 113 (198)
Q Consensus 35 g~~~L~~A~~~~~~~~~~~L~~~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~ 113 (198)
+.+|||.|+..|+.+++++|++.+.. ++.++..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 46899999999999999999999877 78889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhccccc
Q psy14007 114 TPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVG 193 (198)
Q Consensus 114 ~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~ 193 (198)
.+++++|+++ +.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||+++|+..++.++++.|.+.+.
T Consensus 82 ~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (172)
T 3v30_A 82 TDIVGLLLER--DVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHIL 159 (172)
T ss_dssp HHHHHHHHTT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHH
Confidence 9999999998 66888999999999999999999999999999999999999999999999999999999999998876
Q ss_pred CCC
Q psy14007 194 DLP 196 (198)
Q Consensus 194 ~~~ 196 (198)
++.
T Consensus 160 ~~~ 162 (172)
T 3v30_A 160 KLF 162 (172)
T ss_dssp HHS
T ss_pred HHh
Confidence 543
No 72
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=5.2e-35 Score=192.03 Aligned_cols=152 Identities=31% Similarity=0.365 Sum_probs=144.7
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCCh
Q psy14007 35 NRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGIT 114 (198)
Q Consensus 35 g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~ 114 (198)
..++|+.|++.|+.+++++|++.|++++ .+..|.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..++.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChH
Confidence 3579999999999999999999998876 588899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhc
Q psy14007 115 PVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIE 189 (198)
Q Consensus 115 ~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~ 189 (198)
+++++|+++ +.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||+++|+..++.++++.|+
T Consensus 81 ~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~ 153 (153)
T 1awc_B 81 NIVEVLLKH--GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQ 153 (153)
T ss_dssp HHHHHHHTT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHC
T ss_pred HHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHhC
Confidence 999999998 6688899999999999999999999999999999999999999999999999999999998874
No 73
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=7.1e-35 Score=206.96 Aligned_cols=161 Identities=25% Similarity=0.274 Sum_probs=146.5
Q ss_pred CcchhHHHHH---hcCcHHHHHHHHhCCCC-----------CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccC-
Q psy14007 1 NERLLIHWAA---LSGREDVVDFLLKNKSP-----------VDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKA- 65 (198)
Q Consensus 1 ~g~~~L~~A~---~~g~~~~~~~l~~~~~~-----------~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~- 65 (198)
+|+||||+|+ ..|+.+++++|++.|++ .+..+..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 45 ~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 124 (260)
T 3jxi_A 45 TGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQAR 124 (260)
T ss_dssp TCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCE
T ss_pred CCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcccc
Confidence 3899999999 77999999999998743 34555689999999999999999999999999999988
Q ss_pred -------------CCCCcHHHHHHhcChHHHHHHHHh---cCCCCCcCCCCCCcHHHHHHhcCC---------hHHHHHH
Q psy14007 66 -------------DGGHSALQYACSKGWKEIAELLIH---NHANVNIQDVRGATPLHRAASQGI---------TPVVKLL 120 (198)
Q Consensus 66 -------------~~~~t~l~~a~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~l~~a~~~~~---------~~~~~~l 120 (198)
..|.||||+|+..|+.+++++|++ .|++++..+..|.||||+|+..++ .+++++|
T Consensus 125 ~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~L 204 (260)
T 3jxi_A 125 GRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLL 204 (260)
T ss_dssp ECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHH
T ss_pred ccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHH
Confidence 689999999999999999999999 999999999999999999998887 6899999
Q ss_pred HhccCCCCc-------ccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcc
Q psy14007 121 LTQRLDIDV-------NITDAYGNTPLHYACEEKRLTDAKLLVRCGARLD 163 (198)
Q Consensus 121 ~~~~~~~~~-------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~ 163 (198)
++++ .++ +..|..|.||||+|+..|+.+++++|+++|++..
T Consensus 205 l~~g--a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 205 LIKC--AKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp HHHH--HHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHhC--cccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 9984 455 6799999999999999999999999999987643
No 74
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-34 Score=209.59 Aligned_cols=187 Identities=26% Similarity=0.332 Sum_probs=166.7
Q ss_pred HHHhcCcHHHHHHHHhCCCCCCC---------CCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhc
Q psy14007 8 WAALSGREDVVDFLLKNKSPVDP---------KDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSK 78 (198)
Q Consensus 8 ~A~~~g~~~~~~~l~~~~~~~~~---------~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~ 78 (198)
.++..++.+.++.++.....+.. .+..|.|||+.|+..|+.+++++|++.|++++..+..|.||||+|+..
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 83 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACID 83 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 46777788888888876654332 233577999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCC-------------------------
Q psy14007 79 GWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITD------------------------- 133 (198)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~------------------------- 133 (198)
|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++++. +++..+
T Consensus 84 g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~ 161 (299)
T 1s70_B 84 DNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGA--HVGAVNSEGDTPLDIAEEEAMEELLQNEVNR 161 (299)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHCCSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC--CCCCcCCCCCCHHHHHHhcchHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999843 443332
Q ss_pred -----------------------------------CCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCC
Q psy14007 134 -----------------------------------AYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPL 178 (198)
Q Consensus 134 -----------------------------------~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~ 178 (198)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||+|+|+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~ 241 (299)
T 1s70_B 162 QGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAH 241 (299)
T ss_dssp HTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHH
T ss_pred cCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHh
Confidence 457899999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhhcccccCCC
Q psy14007 179 PHLAQALTEIEPIVGDLP 196 (198)
Q Consensus 179 ~~~~~~~~~l~~~~~~~~ 196 (198)
.++.++++.|.+.+.++.
T Consensus 242 ~~~~~~v~~Ll~~gad~~ 259 (299)
T 1s70_B 242 WGKEEACRILVENLCDME 259 (299)
T ss_dssp TTCHHHHHHHHHTTCCTT
T ss_pred cCCHHHHHHHHHcCCCCC
Confidence 999999999999998764
No 75
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=4.9e-35 Score=214.23 Aligned_cols=183 Identities=18% Similarity=0.150 Sum_probs=154.8
Q ss_pred HHHHHhcCcHHHHHHHHhCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh---H
Q psy14007 6 IHWAALSGREDVVDFLLKNKSPVDP-KDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW---K 81 (198)
Q Consensus 6 L~~A~~~g~~~~~~~l~~~~~~~~~-~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~---~ 81 (198)
+|.|+..+..++++.|++.|++++. .+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+ .
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~ 180 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDS 180 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHT
T ss_pred hHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccH
Confidence 4777777788999999999999999 89999999999999999999999999999999999999999999999998 6
Q ss_pred HHHHHHHhcC-CCCCcCCCCCCcHHHHHHh----cCChHHHHHHHhccC------------------CCCcccCCCCCCC
Q psy14007 82 EIAELLIHNH-ANVNIQDVRGATPLHRAAS----QGITPVVKLLLTQRL------------------DIDVNITDAYGNT 138 (198)
Q Consensus 82 ~~~~~l~~~~-~~~~~~~~~~~~~l~~a~~----~~~~~~~~~l~~~~~------------------~~~~~~~~~~g~t 138 (198)
++++.|++.+ .+++..+..|.||||+|++ .|+.+++++|++.+. +.+++..+..|.|
T Consensus 181 ~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t 260 (327)
T 1sw6_A 181 GTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKD 260 (327)
T ss_dssp TCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------C
T ss_pred HHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCC
Confidence 7777777765 6788999999999999999 899999999998643 6688889999999
Q ss_pred HHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhcccccCCC
Q psy14007 139 PLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGDLP 196 (198)
Q Consensus 139 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~~~ 196 (198)
|||.|+. +++|+++ +++.+|..|.||+|+|+..++.++++.|.+.+.++.
T Consensus 261 ~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~ 310 (327)
T 1sw6_A 261 SILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPF 310 (327)
T ss_dssp HHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTT
T ss_pred hhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 9999985 8999998 688999999999999999999999999999998874
No 76
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=100.00 E-value=1.6e-33 Score=185.44 Aligned_cols=153 Identities=29% Similarity=0.349 Sum_probs=145.2
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhc-CCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCC
Q psy14007 35 NRTPLILAAAAGKLEIVRLLISN-GADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGI 113 (198)
Q Consensus 35 g~~~L~~A~~~~~~~~~~~L~~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~ 113 (198)
+.++|+.|+..|+.+++++|++. +.+++.++..|.||||+ +..|+.+++++|++.|++++..+..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 45899999999999999999998 44888899999999999 99999999999999999999999999999999999999
Q ss_pred hHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhccc
Q psy14007 114 TPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPI 191 (198)
Q Consensus 114 ~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~ 191 (198)
.+++++|+++ +.+++..+..|.||||+|+..|+.+++++|+++ ++++.++..|.||+++|+..++.++++.|.+.
T Consensus 81 ~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 81 LDTLKVLVEH--GADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999998 568889999999999999999999999999999 99999999999999999999999999998764
No 77
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=100.00 E-value=2e-32 Score=176.26 Aligned_cols=134 Identities=28% Similarity=0.361 Sum_probs=127.5
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCC-CCc
Q psy14007 25 KSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVR-GAT 103 (198)
Q Consensus 25 ~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~-~~~ 103 (198)
+++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+. ++.+++++|+++|++++..+.. |.|
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t 80 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR 80 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence 56788899999999999999999999999999999999999999999999999 9999999999999999999999 999
Q ss_pred HHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCC
Q psy14007 104 PLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGAR 161 (198)
Q Consensus 104 ~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 161 (198)
|||+|+..++.+++++|+++ +.+++..+..|.||||+|+..++.+++++|+++|+|
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~--ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRA--GARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHT--CCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999998 668889999999999999999999999999999986
No 78
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=100.00 E-value=1.1e-32 Score=181.43 Aligned_cols=146 Identities=27% Similarity=0.313 Sum_probs=116.4
Q ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCc-HHHH
Q psy14007 29 DPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGAT-PLHR 107 (198)
Q Consensus 29 ~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~l~~ 107 (198)
...+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+ .++.+++++|+++|++++..+..|.| |||+
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD 84 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 445678899999999999999999999999999999999999999985 88999999999999999999999998 9999
Q ss_pred HHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCC
Q psy14007 108 AASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLP 177 (198)
Q Consensus 108 a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~ 177 (198)
|+..|+.+++++|+++ +.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||.+-+.
T Consensus 85 A~~~~~~~~v~~Ll~~--ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~~ 152 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRA--GARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGPS 152 (156)
T ss_dssp HHHHTCHHHHHHHHHH--TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------------------
T ss_pred HHHCCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccCC
Confidence 9999999999999998 6688889999999999999999999999999999999999999999877543
No 79
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.98 E-value=4.9e-33 Score=187.89 Aligned_cols=161 Identities=16% Similarity=0.217 Sum_probs=139.7
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCCCCCCCC-CCCCCHHHHHHHcCCH----HHHHHHHhcCCCccccCCCCCcHHHHHH
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKSPVDPKD-DTNRTPLILAAAAGKL----EIVRLLISNGADVNAKADGGHSALQYAC 76 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~-~~g~~~L~~A~~~~~~----~~~~~L~~~~~~~~~~~~~~~t~l~~a~ 76 (198)
+.++|+.|++.|+.+.++.+++.+. +..+ ..|+||||+|+..++. +++++|+++|++++.++..|.||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 4688999999999999999998774 3444 6799999999999975 5999999999999999999999999999
Q ss_pred hcCh------HHHHHHHHhcCCCCCcCCCCCC-cHHHHHHhcCC-----hHHHHHHHh-ccCCCCcccCCCCCCCHHHHH
Q psy14007 77 SKGW------KEIAELLIHNHANVNIQDVRGA-TPLHRAASQGI-----TPVVKLLLT-QRLDIDVNITDAYGNTPLHYA 143 (198)
Q Consensus 77 ~~~~------~~~~~~l~~~~~~~~~~~~~~~-~~l~~a~~~~~-----~~~~~~l~~-~~~~~~~~~~~~~g~t~l~~a 143 (198)
..++ .+++++|+++|++++.+|..|. ||||+|+..+. .+++++|++ + |++++.+|..|.||||+|
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~--gad~~~~d~~G~TpL~~A 161 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQS--GLQLLIKDKWGLTALEFV 161 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTST--TCCTTCCCTTSCCHHHHH
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhc--CCCCcccCCCCCCHHHHH
Confidence 9886 6889999999999999999999 99999998554 458889998 6 678899999999999999
Q ss_pred HHhCChhhHHHHHHcCCCcceec
Q psy14007 144 CEEKRLTDAKLLVRCGARLDIQN 166 (198)
Q Consensus 144 ~~~~~~~~~~~Ll~~g~~~~~~~ 166 (198)
+..++.+++++|.++...++.++
T Consensus 162 ~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 162 KRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp HTTTCHHHHHHHHHHHHHHTCCC
T ss_pred HHcCCHHHHHHHHHHHHHHhccc
Confidence 99999999999998765554443
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.98 E-value=8.5e-33 Score=194.08 Aligned_cols=161 Identities=22% Similarity=0.206 Sum_probs=119.4
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhc
Q psy14007 32 DDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQ 111 (198)
Q Consensus 32 ~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~ 111 (198)
+..|.||||.|++.++.+.++.|+++|++++. +..+.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 34689999999999999999999999999875 47789999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCC-CccccC--CChhHHHHHhhh
Q psy14007 112 GITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKK-TPLDLL--PLPHLAQALTEI 188 (198)
Q Consensus 112 ~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~-t~~~~a--~~~~~~~~~~~l 188 (198)
|+.+++++|+++ +.+++..|..|.||||+|+..++.+++++|+++|++++..+..|. ||+|+| +..++.++++.|
T Consensus 81 g~~~~v~~Ll~~--ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~L 158 (239)
T 1ycs_B 81 GHTEIVKFLVQF--GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 158 (239)
T ss_dssp TCHHHHHHHHHH--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHH
T ss_pred CCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHH
Confidence 999999999998 668899999999999999999999999999999999999998877 999999 788999999999
Q ss_pred cccccCC
Q psy14007 189 EPIVGDL 195 (198)
Q Consensus 189 ~~~~~~~ 195 (198)
...+.++
T Consensus 159 l~~~a~~ 165 (239)
T 1ycs_B 159 YGVQEKM 165 (239)
T ss_dssp HHHHHHT
T ss_pred HHhhhcc
Confidence 8877654
No 81
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.98 E-value=5.2e-32 Score=178.28 Aligned_cols=140 Identities=19% Similarity=0.234 Sum_probs=119.3
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCc-HHHHHHhcC
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHS-ALQYACSKG 79 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t-~l~~a~~~~ 79 (198)
.|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+ .++.+++++|+++|++++.++..|.| |||+|+..+
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~ 89 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREG 89 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHT
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCC
Confidence 4789999999999999999999999999999999999999985 89999999999999999999999999 999999999
Q ss_pred hHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHH
Q psy14007 80 WKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYA 143 (198)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a 143 (198)
+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++ |.+++..+..|.||.+.+
T Consensus 90 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 90 FLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAA--AGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp CHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSC--C-----------------
T ss_pred CHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHc--CCCCCccCcCcCcccccC
Confidence 99999999999999999999999999999999999999999998 668888999999987743
No 82
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=5.7e-32 Score=188.57 Aligned_cols=162 Identities=24% Similarity=0.207 Sum_probs=140.8
Q ss_pred HHHHHhCCCCCCCCC---CCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCC
Q psy14007 18 VDFLLKNKSPVDPKD---DTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANV 94 (198)
Q Consensus 18 ~~~l~~~~~~~~~~~---~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~ 94 (198)
++.|+++|.+++..+ .++.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.|+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 467888888876544 45667899999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCC-CCCCCHHHHH--HHhCChhhHHHHHHcCCCcceecCCCCC
Q psy14007 95 NIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITD-AYGNTPLHYA--CEEKRLTDAKLLVRCGARLDIQNKEKKT 171 (198)
Q Consensus 95 ~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~-~~g~t~l~~a--~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 171 (198)
+..+..|.||||+|+..|+.+++++|++. +.+++..+ ..|.||||+| +..++.+++++|+++|++++..+..|.|
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~--ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~ 158 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQH--GAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVY 158 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTT--TCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEE
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchH
Confidence 99999999999999999999999999998 66777776 6899999999 9999999999999999999999999999
Q ss_pred ccccCCChhH
Q psy14007 172 PLDLLPLPHL 181 (198)
Q Consensus 172 ~~~~a~~~~~ 181 (198)
|++.+.....
T Consensus 159 ~l~~~~~~~~ 168 (229)
T 2vge_A 159 ALWDYSAEFG 168 (229)
T ss_dssp ESSCBCCSST
T ss_pred HHHHHhhccc
Confidence 9996665543
No 83
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.97 E-value=1.9e-30 Score=166.97 Aligned_cols=121 Identities=39% Similarity=0.494 Sum_probs=69.2
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChH
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWK 81 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~ 81 (198)
|.+|||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++.
T Consensus 14 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~ 93 (136)
T 2jab_A 14 LGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHL 93 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred ccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCH
Confidence 34555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHh
Q psy14007 82 EIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLT 122 (198)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~ 122 (198)
+++++|+++|++++..+..|.||+++|+..++.+++++|++
T Consensus 94 ~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 94 EIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 55555555555555555555555555555555555555554
No 84
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.97 E-value=2.5e-30 Score=164.05 Aligned_cols=123 Identities=47% Similarity=0.678 Sum_probs=83.9
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
||+||||+|+..|+.+++++|+++|.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 56777777777777777777777777777777777777777777777777777777776666666666666666666666
Q ss_pred HHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhc
Q psy14007 81 KEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQ 123 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~ 123 (198)
.+++++|+++|++++..+..|.||+++|+..++.+++++|+++
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 123 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 123 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 6666666666666666666666666666666666666666655
No 85
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.97 E-value=5e-31 Score=169.72 Aligned_cols=123 Identities=20% Similarity=0.297 Sum_probs=119.8
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCC-CCcHHHHHHhcC
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADG-GHSALQYACSKG 79 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~-~~t~l~~a~~~~ 79 (198)
+|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+. ++.+++++|+++|++++.++.. |.||||+|+..+
T Consensus 11 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~ 89 (136)
T 1d9s_A 11 SSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREG 89 (136)
T ss_dssp CCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHT
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcC
Confidence 48899999999999999999999999999999999999999999 9999999999999999999999 999999999999
Q ss_pred hHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhcc
Q psy14007 80 WKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQR 124 (198)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~ 124 (198)
+.+++++|+++|++++..+..|.||+|+|+..++.+++++|++++
T Consensus 90 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 90 FLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp CHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999874
No 86
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.97 E-value=5.8e-30 Score=162.33 Aligned_cols=126 Identities=48% Similarity=0.693 Sum_probs=121.1
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCC
Q psy14007 34 TNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGI 113 (198)
Q Consensus 34 ~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~ 113 (198)
+|.||||+|++.|+.+++++|++++++++.++..|.||||.|+..++.+++++|++.|++++..+..|.||+|+|+..++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCC
Q psy14007 114 TPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGAR 161 (198)
Q Consensus 114 ~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 161 (198)
.+++++|+++ +.+++..+..|.||||+|+..++.+++++|+++|+|
T Consensus 81 ~~~~~~Ll~~--g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 81 LEVVKLLLEA--GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999998 667888999999999999999999999999999986
No 87
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.97 E-value=6e-30 Score=164.83 Aligned_cols=135 Identities=30% Similarity=0.320 Sum_probs=103.8
Q ss_pred CCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCC
Q psy14007 59 ADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNT 138 (198)
Q Consensus 59 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t 138 (198)
+++ .++..|.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|+++ +.+++..+..|.|
T Consensus 2 ~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t 78 (137)
T 3c5r_A 2 IDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQH--KALVNTTGYQNDS 78 (137)
T ss_dssp --C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCGGGCC
T ss_pred CCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCcccCcCCCCCC
Confidence 444 4566677777777777777777777777777777777777777777777777777777776 5567778888999
Q ss_pred HHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhcccccCCC
Q psy14007 139 PLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGDLP 196 (198)
Q Consensus 139 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~~~ 196 (198)
|||+|+..++.+++++|+++|++++.+|..|.||+++|+..+..++++.+.......+
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s~~ 136 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESSSA 136 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC--------
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccCCC
Confidence 9999999999999999999999999999999999999999999999999888766543
No 88
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.97 E-value=2.6e-30 Score=181.90 Aligned_cols=141 Identities=26% Similarity=0.296 Sum_probs=130.5
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccC-CCCCcHHHHHHhcC
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKA-DGGHSALQYACSKG 79 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~-~~~~t~l~~a~~~~ 79 (198)
+|+||||+|+..|+.+++++|++ |.+++..+..|.||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+..|
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g 122 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 122 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcC
Confidence 37899999999999999999999 99999999999999999999999999999999999999888 78999999999999
Q ss_pred hHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcC
Q psy14007 80 WKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCG 159 (198)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 159 (198)
+.+++++|+++|++++..+..|.||+|+|+..+. ...+.|||++|+..|+.+++++|++++
T Consensus 123 ~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-------------------~~~~~~~l~~a~~~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 123 RPEVVEALVELGADIEVEDERGLTALELAREILK-------------------TTPKGNPMQFGRRIGLEKVINVLEGQV 183 (244)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-------------------TCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-------------------ccCCCCHHHHHHHcChHHHHHHHHHhc
Confidence 9999999999999999999999999999985211 145789999999999999999999875
Q ss_pred CC
Q psy14007 160 AR 161 (198)
Q Consensus 160 ~~ 161 (198)
.+
T Consensus 184 ~~ 185 (244)
T 3ui2_A 184 FE 185 (244)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.97 E-value=1.1e-29 Score=163.38 Aligned_cols=127 Identities=37% Similarity=0.485 Sum_probs=117.9
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHh
Q psy14007 31 KDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAAS 110 (198)
Q Consensus 31 ~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~ 110 (198)
....+.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+.
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcC
Q psy14007 111 QGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCG 159 (198)
Q Consensus 111 ~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 159 (198)
.++.+++++|+++ +.+++..|..|.||||+|+..++.+++++|+++|
T Consensus 90 ~~~~~~v~~Ll~~--g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IGHLEIAEVLLKH--GADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHc--CCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999998 6688889999999999999999999999999876
No 90
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.97 E-value=9.4e-30 Score=171.69 Aligned_cols=137 Identities=28% Similarity=0.321 Sum_probs=125.3
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccC-CCCCcHHHHHHhcCh
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKA-DGGHSALQYACSKGW 80 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~-~~~~t~l~~a~~~~~ 80 (198)
|+||||+|+..|+.+++++|++ |.+++..+..|.||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+..++
T Consensus 44 g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~ 122 (183)
T 3deo_A 44 YETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVR 122 (183)
T ss_dssp HHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCc
Confidence 6899999999999999999999 99999999999999999999999999999999999999888 789999999999999
Q ss_pred HHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHc
Q psy14007 81 KEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRC 158 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 158 (198)
.+++++|+++|++++.++..|.||+|+|+..++. ..+.+||++|+..|..+++++|.++
T Consensus 123 ~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-------------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 123 PEVVEALVELGADIEVEDERGLTALELAREILKT-------------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-------------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-------------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 9999999999999999999999999999863221 2356999999999999999999865
No 91
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.97 E-value=1.5e-31 Score=180.63 Aligned_cols=156 Identities=19% Similarity=0.155 Sum_probs=139.4
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhcCCCccccC-CCCCcHHHHHHhcChH----HHHHHHHhcCCCCCcCCCCCCcHHHHHH
Q psy14007 35 NRTPLILAAAAGKLEIVRLLISNGADVNAKA-DGGHSALQYACSKGWK----EIAELLIHNHANVNIQDVRGATPLHRAA 109 (198)
Q Consensus 35 g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~-~~~~t~l~~a~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~l~~a~ 109 (198)
+.++|+.|++.|+.+.++.+++.+.+ .++ ..|.||||+|+..++. +++++|+++|++++.++..|+||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~--~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYE--DKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSS--CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcc--cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 45789999999999999999987654 344 6799999999999864 5999999999999999999999999999
Q ss_pred hcCC------hHHHHHHHhccCCCCcccCCCCCC-CHHHHHHHhC-----ChhhHHHHHH-cCCCcceecCCCCCccccC
Q psy14007 110 SQGI------TPVVKLLLTQRLDIDVNITDAYGN-TPLHYACEEK-----RLTDAKLLVR-CGARLDIQNKEKKTPLDLL 176 (198)
Q Consensus 110 ~~~~------~~~~~~l~~~~~~~~~~~~~~~g~-t~l~~a~~~~-----~~~~~~~Ll~-~g~~~~~~~~~g~t~~~~a 176 (198)
..+. .+++++|+++ |++++..|..|. ||||+|+..+ ..+++++|++ +|++++.+|..|.||+|+|
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~--Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A 161 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEK--GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFV 161 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHT--TCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHH
T ss_pred HcCCcchhhHHHHHHHHHHC--CCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHH
Confidence 9887 5789999998 678999999999 9999999944 3568999999 9999999999999999999
Q ss_pred CChhHHHHHhhhcccccC
Q psy14007 177 PLPHLAQALTEIEPIVGD 194 (198)
Q Consensus 177 ~~~~~~~~~~~l~~~~~~ 194 (198)
...++.++++.|..+..+
T Consensus 162 ~~~~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 162 KRCQKPIALKMMEDYIKK 179 (186)
T ss_dssp HTTTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHH
Confidence 999999999999887653
No 92
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=7.5e-33 Score=205.17 Aligned_cols=169 Identities=17% Similarity=0.127 Sum_probs=139.5
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCc---cccCCCCCcHHHH
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPV---DPKDDTNRTPLILAAAAGKLEIVRLLISNGADV---NAKADGGHSALQY 74 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~---~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~---~~~~~~~~t~l~~ 74 (198)
+++||||+|+..|+.+++++|+++|... +..+..|.||||+|+..|+.+++++|+++|+++ +..+.. .||||+
T Consensus 91 ~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~ 169 (376)
T 2aja_A 91 KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRL 169 (376)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHH
T ss_pred CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHH
Confidence 3579999999999999999999998732 234456789999999999999999999999752 222223 899999
Q ss_pred HHhcChHHHHHHHHhcCCCCCc--CCCCCCcHHHHHH-hcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhh
Q psy14007 75 ACSKGWKEIAELLIHNHANVNI--QDVRGATPLHRAA-SQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTD 151 (198)
Q Consensus 75 a~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~l~~a~-~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 151 (198)
|+..|+.+++++|+++|++++. .+..|.||||+|+ ..|+.+++++|++.+ . .|.||||.|+..|+.++
T Consensus 170 Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g--a-------~~~taL~~Aa~~g~~ev 240 (376)
T 2aja_A 170 AAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP--V-------MLAYAEIHEFEYGEKYV 240 (376)
T ss_dssp HHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH--H-------HHHHHHHCTTTTTTTTH
T ss_pred HHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC--C-------ccchHHHHHHHCCCHHH
Confidence 9999999999999999999877 7888999999999 999999999999863 2 27899999999999999
Q ss_pred HHHHHHcCCCcceecCCCCCccccCCChhHHH
Q psy14007 152 AKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQ 183 (198)
Q Consensus 152 ~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~ 183 (198)
+++|+++|++++..+. +++.|+..|..+
T Consensus 241 v~lL~~~ga~~~~~~~----~l~~A~~~g~~~ 268 (376)
T 2aja_A 241 NPFIARHVNRLKEMHD----AFKLSNPDGVFD 268 (376)
T ss_dssp HHHHHHHHHHHHHHHT----TTTTTSSSSCCC
T ss_pred HHHHHhcCcccccccH----HHHHHHHCCChh
Confidence 9999999998876653 566666555544
No 93
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.96 E-value=1.3e-29 Score=163.32 Aligned_cols=132 Identities=30% Similarity=0.434 Sum_probs=97.3
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcH
Q psy14007 25 KSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATP 104 (198)
Q Consensus 25 ~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 104 (198)
|+++ ..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|+++|++++..+..|.||
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence 4455 566777788888888888888888888777777777777888888888888888888888887777777777888
Q ss_pred HHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcC
Q psy14007 105 LHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCG 159 (198)
Q Consensus 105 l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 159 (198)
||+|+..++.+++++|+++ +.+++..|..|.||+|+|+..+..+++++|.+.+
T Consensus 80 L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSY--GASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred HHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 8888888888888888776 5567777777888888887777777776666544
No 94
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.96 E-value=1.4e-28 Score=155.57 Aligned_cols=108 Identities=27% Similarity=0.359 Sum_probs=87.6
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChH
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWK 81 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~ 81 (198)
|.++||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..++.
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~ 86 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHV 86 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCH
Confidence 56788888888888888888888888888888888888888888888888888888888877788888888888888888
Q ss_pred HHHHHHHhcCCCCCcCCCCCCcHHHHHH
Q psy14007 82 EIAELLIHNHANVNIQDVRGATPLHRAA 109 (198)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~l~~a~ 109 (198)
+++++|+++|++++..+..|.||+++|.
T Consensus 87 ~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 87 SCVKLLLSKGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHhC
Confidence 8888888888888777888888888773
No 95
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.96 E-value=1.9e-30 Score=175.09 Aligned_cols=140 Identities=26% Similarity=0.304 Sum_probs=128.9
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCC-CCCCcHHHHHHh
Q psy14007 32 DDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQD-VRGATPLHRAAS 110 (198)
Q Consensus 32 ~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~l~~a~~ 110 (198)
+..|.||||+|+..|+.+++++|++ +.+++.++..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 3478899999999999999999999 99999999999999999999999999999999999999888 889999999999
Q ss_pred cCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhcc
Q psy14007 111 QGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEP 190 (198)
Q Consensus 111 ~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~ 190 (198)
.|+.+++++|+++ +.+++..|..|.||||+|+..++. ..+.+|+++|+..+..++++.|..
T Consensus 120 ~~~~~~v~~Ll~~--ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~L~~ 180 (183)
T 3deo_A 120 YVRPEVVEALVEL--GADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEG 180 (183)
T ss_dssp TTCHHHHHHHHHH--TCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred cCcHHHHHHHHHc--CCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHHHHHHH
Confidence 9999999999998 668889999999999999985433 456899999999999999999876
Q ss_pred c
Q psy14007 191 I 191 (198)
Q Consensus 191 ~ 191 (198)
.
T Consensus 181 ~ 181 (183)
T 3deo_A 181 Q 181 (183)
T ss_dssp C
T ss_pred h
Confidence 4
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.96 E-value=2.4e-28 Score=176.58 Aligned_cols=143 Identities=22% Similarity=0.188 Sum_probs=125.2
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcCCCccc------cCCCCCcHHHHHHhc---ChHHHHHHHHhcCCCCCcCCCCCC
Q psy14007 32 DDTNRTPLILAAAAGKLEIVRLLISNGADVNA------KADGGHSALQYACSK---GWKEIAELLIHNHANVNIQDVRGA 102 (198)
Q Consensus 32 ~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~------~~~~~~t~l~~a~~~---~~~~~~~~l~~~~~~~~~~~~~~~ 102 (198)
.....++|+.|+..++.+.++.|++.|++++. .+..|.||||+|+.. ++.+++++|+++|++++..+..|.
T Consensus 148 ~~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~ 227 (301)
T 2b0o_E 148 CTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGN 227 (301)
T ss_dssp CC-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCC
T ss_pred cCchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCC
Confidence 34567899999999999999999999999887 588999999999997 899999999999999999999999
Q ss_pred cHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHH
Q psy14007 103 TPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLA 182 (198)
Q Consensus 103 ~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~ 182 (198)
||||+|+..|+.+++++|++. |++++..|..|.||||+|+..++.+++++|+++|++ .|.||+|+|+..|..
T Consensus 228 TpLh~A~~~g~~~~v~~Ll~~--gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 228 TALHYAALYNQPDCLKLLLKG--RALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT--TCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred CHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 999999999999999999998 668889999999999999999999999999999987 589999999988764
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.95 E-value=7.4e-28 Score=174.05 Aligned_cols=137 Identities=23% Similarity=0.201 Sum_probs=90.2
Q ss_pred hhHHHHHhcCcHHHHHHHHhCCCCCCC------CCCCCCCHHHHHHHc---CCHHHHHHHHhcCCCccccCCCCCcHHHH
Q psy14007 4 LLIHWAALSGREDVVDFLLKNKSPVDP------KDDTNRTPLILAAAA---GKLEIVRLLISNGADVNAKADGGHSALQY 74 (198)
Q Consensus 4 ~~L~~A~~~g~~~~~~~l~~~~~~~~~------~~~~g~~~L~~A~~~---~~~~~~~~L~~~~~~~~~~~~~~~t~l~~ 74 (198)
++|+.|+..|+.+.++.|++.|++++. .+..|.||||+|+.. ++.+++++|+++|++++.+|..|.||||+
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~ 232 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 232 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHH
Confidence 457777777777777777777776665 466677777777765 66777777777777777777777777777
Q ss_pred HHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCC
Q psy14007 75 ACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKR 148 (198)
Q Consensus 75 a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~ 148 (198)
|+..|+.+++++|+++|++++..|..|.|||++|+..++.+++++|++.+. + .|.||||+|+..|+
T Consensus 233 A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga--~------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 233 AALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQA--G------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH--H------TTSSCCC-------
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC--C------CCCChhHHHHhcCC
Confidence 777777777777777777777777777777777777777777777776532 1 35677777766654
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.95 E-value=1.1e-27 Score=151.43 Aligned_cols=120 Identities=23% Similarity=0.259 Sum_probs=90.9
Q ss_pred CCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHH
Q psy14007 65 ADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYAC 144 (198)
Q Consensus 65 ~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~ 144 (198)
+..+.||||.|+..|+.+++++|++.|.+++..+..|.||||+|+..++.+++++|++. +.+++..|..|.||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLK--GADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTT--TCCTTCCCTTSCCHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCCcCCCCCCCHHHHHH
Confidence 34566777777777777777777777777777777777777777777777777777776 5566777788888888888
Q ss_pred HhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHh
Q psy14007 145 EEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALT 186 (198)
Q Consensus 145 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~ 186 (198)
..++.+++++|+++|++++.+|..|.||+++|...+..++++
T Consensus 82 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ll~ 123 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123 (123)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHHHC
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHHhC
Confidence 888888888888888888888888888888887777766653
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.95 E-value=2.4e-28 Score=169.58 Aligned_cols=135 Identities=28% Similarity=0.376 Sum_probs=79.9
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhc-CCCCCcCCCCCCcHHHHHHh
Q psy14007 32 DDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHN-HANVNIQDVRGATPLHRAAS 110 (198)
Q Consensus 32 ~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~l~~a~~ 110 (198)
+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++. |++++..+..|.||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 34456666666666666666666666666666666666666666666666666666666 66666666666666666666
Q ss_pred cCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCC
Q psy14007 111 QGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKE 168 (198)
Q Consensus 111 ~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~ 168 (198)
.|+.+++++|+++ |.+++..+..|.||||+|+..++.++++.|++.|++....+..
T Consensus 150 ~~~~~~v~~Ll~~--ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~ 205 (222)
T 3ehr_A 150 KGYADIVQLLLAK--GARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAE 205 (222)
T ss_dssp HTCHHHHHHHHHH--TCCSCCCCTTSCCHHHHCCSHHHHHHHC---------------
T ss_pred cCCHHHHHHHHHc--CCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchh
Confidence 6666666666666 4456666666667777766666666666666666666555543
No 100
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=5.5e-31 Score=195.21 Aligned_cols=174 Identities=14% Similarity=0.004 Sum_probs=144.5
Q ss_pred hhHHHHHh-cCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCc---cccCCCCCcHHHHHHhcC
Q psy14007 4 LLIHWAAL-SGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADV---NAKADGGHSALQYACSKG 79 (198)
Q Consensus 4 ~~L~~A~~-~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~---~~~~~~~~t~l~~a~~~~ 79 (198)
+++++|.. .++.+++++++++|.+ +.||||+|++.|+.+++++|++.|+.. +..+..+.||||+|+..|
T Consensus 67 l~~~~a~~~~~~~~~~~~l~~~g~~-------~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G 139 (376)
T 2aja_A 67 LCLYYAHYNRNAKQLWSDAHKKGIK-------SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENG 139 (376)
T ss_dssp HHHHHHHTTTTCTTHHHHHHHHTCC-------HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCHHHHHHHHHcCCC-------cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcC
Confidence 46777776 5788999999988764 359999999999999999999998732 233446789999999999
Q ss_pred hHHHHHHHHhcCCCC---CcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCccc--CCCCCCCHHHHHH-HhCChhhHH
Q psy14007 80 WKEIAELLIHNHANV---NIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNI--TDAYGNTPLHYAC-EEKRLTDAK 153 (198)
Q Consensus 80 ~~~~~~~l~~~~~~~---~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~--~~~~g~t~l~~a~-~~~~~~~~~ 153 (198)
+.+++++|+++|++. +..+.. .||||+|+..|+.+++++|+++ +.+++. .+..|.||||+|+ ..|+.++++
T Consensus 140 ~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~--ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~ 216 (376)
T 2aja_A 140 HLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCEL--APTEATAMIQAENYYAFRWAAVGRGHHNVIN 216 (376)
T ss_dssp CHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHS--CGGGHHHHHHHHHHHHHHHHHSTTCCHHHHH
T ss_pred CHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHc--CCccchhccCCCCCCHHHHHHHHCCCHHHHH
Confidence 999999999999752 222233 8999999999999999999998 446555 7778999999999 999999999
Q ss_pred HHHHcCCCcceecCCCCCccccCCChhHHHHHhhhcccccC
Q psy14007 154 LLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVGD 194 (198)
Q Consensus 154 ~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~~ 194 (198)
+|+++|++ |.||++.|+..|+.++++.|.+.+.+
T Consensus 217 ~Ll~~ga~-------~~taL~~Aa~~g~~evv~lL~~~ga~ 250 (376)
T 2aja_A 217 FLLDCPVM-------LAYAEIHEFEYGEKYVNPFIARHVNR 250 (376)
T ss_dssp HHTTSHHH-------HHHHHHCTTTTTTTTHHHHHHHHHHH
T ss_pred HHHhCCCc-------cchHHHHHHHCCCHHHHHHHHhcCcc
Confidence 99998752 78999999999999999999887654
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.95 E-value=2.6e-28 Score=169.38 Aligned_cols=128 Identities=29% Similarity=0.326 Sum_probs=72.0
Q ss_pred CCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHH
Q psy14007 65 ADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYAC 144 (198)
Q Consensus 65 ~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~ 144 (198)
+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.. +.+++..|..|.||||+|+
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQP-NIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTST-TCCCCCCCTTSCCHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCC-CCCccccCCCCCCHHHHHH
Confidence 344556666666666666666666666666655556666666666666666666665541 3345555555666666666
Q ss_pred HhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhccccc
Q psy14007 145 EEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPIVG 193 (198)
Q Consensus 145 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~~~ 193 (198)
..|+.+++++|+++|++++.+|..|.||+++|+..+..++++.+...+.
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~ 197 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDA 197 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-------
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccch
Confidence 6666666666666666666666666666666666666666655555443
No 102
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.94 E-value=1.3e-26 Score=171.34 Aligned_cols=120 Identities=28% Similarity=0.337 Sum_probs=64.1
Q ss_pred hhHHHHHhc-CcHHHHHHHHhCCCCCCCCC--CCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 4 LLIHWAALS-GREDVVDFLLKNKSPVDPKD--DTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 4 ~~L~~A~~~-g~~~~~~~l~~~~~~~~~~~--~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
++||.|+.. |+.+++++|+++|++++..+ ..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..++
T Consensus 201 t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~ 280 (368)
T 3jue_A 201 ALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGH 280 (368)
T ss_dssp HHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred cHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCc
Confidence 455555555 55555555555555555444 445555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhc
Q psy14007 81 KEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQ 123 (198)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~ 123 (198)
.+++++|+++|++++..+..|.||||+|+..++.+++++|+..
T Consensus 281 ~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~ 323 (368)
T 3jue_A 281 TGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLA 323 (368)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 5555555555555555555555555555555555555555443
No 103
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.94 E-value=2.5e-27 Score=166.66 Aligned_cols=139 Identities=26% Similarity=0.314 Sum_probs=128.7
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCC-CCCCcHHHHHHhc
Q psy14007 33 DTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQD-VRGATPLHRAASQ 111 (198)
Q Consensus 33 ~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~l~~a~~~ 111 (198)
..|.||||+|++.|+.+++++|++ +++++.++..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 468899999999999999999999 99999999999999999999999999999999999999988 7899999999999
Q ss_pred CChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCChhHHHHHhhhccc
Q psy14007 112 GITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQALTEIEPI 191 (198)
Q Consensus 112 ~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~~~~~~~~~~l~~~ 191 (198)
|+.+++++|+++ +.+++..|..|.||||+|+..++. ..+.||+++|+..+..++++.|...
T Consensus 122 g~~~~v~~Ll~~--ga~~~~~d~~g~t~l~~A~~~~~~-----------------~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 122 VRPEVVEALVEL--GADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp TCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHHTT-----------------CCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHC--CCCCCCCCCCCCcHHHHHHHHHhc-----------------cCCCCHHHHHHHcChHHHHHHHHHh
Confidence 999999999998 668889999999999999864322 5689999999999999999998875
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.94 E-value=2.1e-26 Score=138.43 Aligned_cols=93 Identities=44% Similarity=0.652 Sum_probs=86.4
Q ss_pred CcchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcCh
Q psy14007 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGW 80 (198)
Q Consensus 1 ~g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 80 (198)
||+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCC
Q psy14007 81 KEIAELLIHNHAN 93 (198)
Q Consensus 81 ~~~~~~l~~~~~~ 93 (198)
.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999998864
No 105
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.94 E-value=5.9e-25 Score=157.25 Aligned_cols=132 Identities=22% Similarity=0.253 Sum_probs=106.3
Q ss_pred CHHHHHHHcCCHHHHHHHHhcCCCcc------ccCCCCCcHHHHHHhc---ChHHHHHHHHhcCCCCCcCCCCCCcHHHH
Q psy14007 37 TPLILAAAAGKLEIVRLLISNGADVN------AKADGGHSALQYACSK---GWKEIAELLIHNHANVNIQDVRGATPLHR 107 (198)
Q Consensus 37 ~~L~~A~~~~~~~~~~~L~~~~~~~~------~~~~~~~t~l~~a~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 107 (198)
++|+.|+..++.+.++.+++.|.+++ ..+..|.||||+|+.. ++.+++++|+++|++++..+..|.||||+
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~ 211 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHY 211 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHH
Confidence 47888888888888888888887743 3467788888888888 78888888888888888888888888888
Q ss_pred HHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceecCCCCCccccCCC
Q psy14007 108 AASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDLLPL 178 (198)
Q Consensus 108 a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~~a~~ 178 (198)
|+..|+.+++++|+++ |++++..|..|.||||+|+..|+.+++++|+++|++ .+++|.+..
T Consensus 212 A~~~g~~~~v~~Ll~~--gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~--------~~~~~~~v~ 272 (278)
T 1dcq_A 212 CCLTDNAECLKLLLRG--KASIEIANESGETPLDIAKRLKHEHCEELLTQALSG--------RFNSHVHVE 272 (278)
T ss_dssp HHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT--------CCCSSCCCC
T ss_pred HHHcCCHHHHHHHHHc--CCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC--------CCCcceeee
Confidence 8888888888888886 567788888888888888888888888888888774 455555544
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.93 E-value=1.6e-25 Score=172.27 Aligned_cols=129 Identities=22% Similarity=0.207 Sum_probs=105.4
Q ss_pred CCHHHHHHHcCCHHHHHHHHhcCCCcccc------CCCCCcHHHHHHh---cChHHHHHHHHhcCCCCCcCCCCCCcHHH
Q psy14007 36 RTPLILAAAAGKLEIVRLLISNGADVNAK------ADGGHSALQYACS---KGWKEIAELLIHNHANVNIQDVRGATPLH 106 (198)
Q Consensus 36 ~~~L~~A~~~~~~~~~~~L~~~~~~~~~~------~~~~~t~l~~a~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 106 (198)
.+.||.|+..|+.++++.|++.|++++.. +..|.||||+|+. .|+.+++++|+++|++++..|..|.||||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHH
Confidence 35788888888888888888888888766 7788888888865 78888888888888888888888888888
Q ss_pred HHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcCCCcceec
Q psy14007 107 RAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQN 166 (198)
Q Consensus 107 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 166 (198)
+|+..|+.+++++|+++ |++++..|..|.||||+|+..|+.+++++|+++|++++...
T Consensus 213 ~A~~~g~~~~v~~Ll~~--ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~ 270 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKG--RALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFP 270 (497)
T ss_dssp HHTTTTCHHHHHHHHHT--CCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------
T ss_pred HHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCc
Confidence 88888888888888887 66788888888888888888888888888888888876643
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.93 E-value=2.4e-25 Score=171.20 Aligned_cols=134 Identities=24% Similarity=0.235 Sum_probs=117.1
Q ss_pred hhHHHHHhcCcHHHHHHHHhCCCCCCCC------CCCCCCHHHHHHH---cCCHHHHHHHHhcCCCccccCCCCCcHHHH
Q psy14007 4 LLIHWAALSGREDVVDFLLKNKSPVDPK------DDTNRTPLILAAA---AGKLEIVRLLISNGADVNAKADGGHSALQY 74 (198)
Q Consensus 4 ~~L~~A~~~g~~~~~~~l~~~~~~~~~~------~~~g~~~L~~A~~---~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~ 74 (198)
+.||.|+..|+.++++.|++.|++++.. +..|.||||+|++ .|+.+++++|+++|++++.+|..|.||||+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 5699999999999999999999999877 8899999999977 899999999999999999999999999999
Q ss_pred HHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHH
Q psy14007 75 ACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACE 145 (198)
Q Consensus 75 a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~ 145 (198)
|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++++ .+.+. +|+|.+..
T Consensus 214 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~g--a~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 214 AALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQ--AGTFA------FPLHVDYS 276 (497)
T ss_dssp HTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTC--C------------------
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhC--CCCCC------Ccceeecc
Confidence 99999999999999999999999999999999999999999999999984 45443 56776543
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.93 E-value=1.3e-25 Score=166.00 Aligned_cols=145 Identities=28% Similarity=0.275 Sum_probs=117.9
Q ss_pred CCCCHHHHHHHc-CCHHHHHHHHhcCCCccccC--CCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHh
Q psy14007 34 TNRTPLILAAAA-GKLEIVRLLISNGADVNAKA--DGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAAS 110 (198)
Q Consensus 34 ~g~~~L~~A~~~-~~~~~~~~L~~~~~~~~~~~--~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~ 110 (198)
.+.++||.|+.. ++.+++++|+++|++++..+ ..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+.
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATI 277 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 345799999999 99999999999999999888 789999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHhccCCCCcccCCCCCCCHHHHHHHhCChhhHHHHHHcC---CCcceecCCCCCccccCCChh
Q psy14007 111 QGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCG---ARLDIQNKEKKTPLDLLPLPH 180 (198)
Q Consensus 111 ~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~~~~a~~~~ 180 (198)
.|+.+++++|+++ +++++..|..|.||||+|+..++.+++++|+..+ ++....+..+.|+++++....
T Consensus 278 ~g~~~~v~~LL~~--Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 278 LGHTGLACLFLKR--GADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred cCcHHHHHHHHHC--cCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 9999999999998 6688899999999999999999999999999876 334456667888888887654
No 109
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.93 E-value=8.4e-25 Score=156.43 Aligned_cols=122 Identities=22% Similarity=0.264 Sum_probs=115.8
Q ss_pred hhHHHHHhcCcHHHHHHHHhCCCCC------CCCCCCCCCHHHHHHHc---CCHHHHHHHHhcCCCccccCCCCCcHHHH
Q psy14007 4 LLIHWAALSGREDVVDFLLKNKSPV------DPKDDTNRTPLILAAAA---GKLEIVRLLISNGADVNAKADGGHSALQY 74 (198)
Q Consensus 4 ~~L~~A~~~g~~~~~~~l~~~~~~~------~~~~~~g~~~L~~A~~~---~~~~~~~~L~~~~~~~~~~~~~~~t~l~~ 74 (198)
++|+.|+..|+.+.++.+++.|.++ +..+..|.||||+|+.. ++.+++++|+++|++++.+|..|.||||+
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~ 211 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHY 211 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHH
Confidence 5799999999999999999999984 44578899999999999 89999999999999999999999999999
Q ss_pred HHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccC
Q psy14007 75 ACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRL 125 (198)
Q Consensus 75 a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~ 125 (198)
|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++++.
T Consensus 212 A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 212 CCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999999999999999854
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.92 E-value=1.7e-25 Score=139.71 Aligned_cols=107 Identities=37% Similarity=0.493 Sum_probs=60.5
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHh
Q psy14007 31 KDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAAS 110 (198)
Q Consensus 31 ~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~ 110 (198)
.|..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+.
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 34455555555555555555555555555555555555555555555555555555555555555555555555655555
Q ss_pred cCChHHHHHHHhccCCCCcccCCCCCCCH
Q psy14007 111 QGITPVVKLLLTQRLDIDVNITDAYGNTP 139 (198)
Q Consensus 111 ~~~~~~~~~l~~~~~~~~~~~~~~~g~t~ 139 (198)
.++.+++++|+++ |++++..+..|.+|
T Consensus 85 ~~~~~~~~~Ll~~--ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 85 NGHHEIVKLLDAK--GADVNARSWGSSHH 111 (115)
T ss_dssp TTCHHHHHHHHTT--SSSHHHHSCCCC--
T ss_pred CCCHHHHHHHHHc--CCCCCcCCcccccc
Confidence 5555555555555 44555555555544
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.91 E-value=7.2e-24 Score=127.30 Aligned_cols=89 Identities=51% Similarity=0.730 Sum_probs=49.7
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCCh
Q psy14007 35 NRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGIT 114 (198)
Q Consensus 35 g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~ 114 (198)
|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|+++|++++.++..|.||+|+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 45555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHhc
Q psy14007 115 PVVKLLLTQ 123 (198)
Q Consensus 115 ~~~~~l~~~ 123 (198)
+++++|+++
T Consensus 82 ~~~~~Ll~~ 90 (93)
T 1n0q_A 82 EVVKLLLEA 90 (93)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 555555544
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.91 E-value=1.6e-24 Score=135.20 Aligned_cols=110 Identities=33% Similarity=0.406 Sum_probs=101.7
Q ss_pred ccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhccCCCCcccCCCCCCCHHHH
Q psy14007 63 AKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHY 142 (198)
Q Consensus 63 ~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~g~t~l~~ 142 (198)
.+|..|.||||.|+..++.+++++|++.|++++..+..|.||||+|+..++.+++++|+++ +.+++..+..|.||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAK--GADVNARSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTT--TCCTTCCCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc--CCCCcccCCCCCCHHHH
Confidence 4688999999999999999999999999999999999999999999999999999999998 66888899999999999
Q ss_pred HHHhCChhhHHHHHHcCCCcceecCCCCCccc
Q psy14007 143 ACEEKRLTDAKLLVRCGARLDIQNKEKKTPLD 174 (198)
Q Consensus 143 a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~~~ 174 (198)
|+..++.+++++|+++|++++.++..|.+|..
T Consensus 82 A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~~ 113 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSSHHHHSCCCC----
T ss_pred HHHCCCHHHHHHHHHcCCCCCcCCcccccccc
Confidence 99999999999999999999999999998853
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.88 E-value=3.7e-22 Score=123.49 Aligned_cols=86 Identities=38% Similarity=0.541 Sum_probs=43.7
Q ss_pred cchhHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChH
Q psy14007 2 ERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWK 81 (198)
Q Consensus 2 g~~~L~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~ 81 (198)
|+++||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++.
T Consensus 24 g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~ 103 (110)
T 2zgd_A 24 LGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNE 103 (110)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCCH
Confidence 44455555555555555555555555554455555555555555555555555555555544444555555555555555
Q ss_pred HHHHHH
Q psy14007 82 EIAELL 87 (198)
Q Consensus 82 ~~~~~l 87 (198)
+++++|
T Consensus 104 ~~~~~L 109 (110)
T 2zgd_A 104 DLAEIL 109 (110)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 544443
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.85 E-value=6.3e-21 Score=117.88 Aligned_cols=92 Identities=33% Similarity=0.454 Sum_probs=65.6
Q ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhcChHHHHHHHHhcCCCCCcCCCCCCcHHHHH
Q psy14007 29 DPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRA 108 (198)
Q Consensus 29 ~~~~~~g~~~L~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a 108 (198)
...+..|.|+||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|+++|++++..+..|.||+|+|
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 34456677777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HhcCChHHHHHH
Q psy14007 109 ASQGITPVVKLL 120 (198)
Q Consensus 109 ~~~~~~~~~~~l 120 (198)
+..++.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 777777776654
No 115
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=78.35 E-value=1.1 Score=34.66 Aligned_cols=142 Identities=11% Similarity=0.061 Sum_probs=74.3
Q ss_pred HHHHHhcCcH----HHHHHHHhCCCCCCCCCCCCCCHHHHHHHc-CC-------------HHHHHHHHhcCCCccccCCC
Q psy14007 6 IHWAALSGRE----DVVDFLLKNKSPVDPKDDTNRTPLILAAAA-GK-------------LEIVRLLISNGADVNAKADG 67 (198)
Q Consensus 6 L~~A~~~g~~----~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~-~~-------------~~~~~~L~~~~~~~~~~~~~ 67 (198)
|...++.|+. ++++.+.+.|..++... .+.|..++.. +. .++++.+.+.|..++....
T Consensus 33 id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~t---yn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~ty- 108 (501)
T 4g26_A 33 LDMCSKKGDVLEALRLYDEARRNGVQLSQYH---YNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATF- 108 (501)
T ss_dssp HHHTTTSCCHHHHHHHHHHHHHHTCCCCHHH---HHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHH-
T ss_pred HHHHHhCCCHHHHHHHHHHHHHcCCCCCHhH---HHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHH-
Confidence 5556677775 45666667787665432 2344444432 21 4566677777877654332
Q ss_pred CCcHHHHHHhcChHHHH----HHHHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHhcc--CCCCcccCCCCCCCHHH
Q psy14007 68 GHSALQYACSKGWKEIA----ELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQR--LDIDVNITDAYGNTPLH 141 (198)
Q Consensus 68 ~~t~l~~a~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~--~~~~~~~~~~~g~t~l~ 141 (198)
.+.+...++.|..+.+ +.+.+.|..++... -.+.+...++.|..+....+++.. .|..++... -.+.+.
T Consensus 109 -n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~t--yn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~t--y~~Li~ 183 (501)
T 4g26_A 109 -TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRS--YGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPE--LAALLK 183 (501)
T ss_dssp -HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHH--HHHHHH
T ss_pred -HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccce--ehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHH--HHHHHH
Confidence 2445666777776544 34445565544321 234555567788876554444321 122222111 123455
Q ss_pred HHHHhCChhhHHHHH
Q psy14007 142 YACEEKRLTDAKLLV 156 (198)
Q Consensus 142 ~a~~~~~~~~~~~Ll 156 (198)
..++.|+.+-+.-++
T Consensus 184 ~~~~~g~~d~A~~ll 198 (501)
T 4g26_A 184 VSMDTKNADKVYKTL 198 (501)
T ss_dssp HHHHTTCHHHHHHHH
T ss_pred HHhhCCCHHHHHHHH
Confidence 566677766554444
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=59.86 E-value=8.2 Score=17.95 Aligned_cols=18 Identities=33% Similarity=0.366 Sum_probs=13.2
Q ss_pred HHHHHHcCCHHHHHHHHh
Q psy14007 39 LILAAAAGKLEIVRLLIS 56 (198)
Q Consensus 39 L~~A~~~~~~~~~~~L~~ 56 (198)
++.||..|+++.++.|-.
T Consensus 17 iyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHTTSCHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHH
Confidence 567788888888877754
No 117
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=56.02 E-value=19 Score=27.74 Aligned_cols=102 Identities=16% Similarity=0.068 Sum_probs=60.9
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH----HhcCCCccccCCCCCcHHHHHHhcChHHH----HHH
Q psy14007 15 EDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLL----ISNGADVNAKADGGHSALQYACSKGWKEI----AEL 86 (198)
Q Consensus 15 ~~~~~~l~~~~~~~~~~~~~g~~~L~~A~~~~~~~~~~~L----~~~~~~~~~~~~~~~t~l~~a~~~~~~~~----~~~ 86 (198)
.++++.+.+.|..++... ..+.+...++.|+.+-...+ .+.|..++.... .+.+...++.|..+- ++.
T Consensus 90 ~~lf~~M~~~G~~Pd~~t--yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~ty--n~lI~~~~~~g~~~~A~~l~~~ 165 (501)
T 4g26_A 90 FDIFKQMIVDKVVPNEAT--FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSY--GPALFGFCRKGDADKAYEVDAH 165 (501)
T ss_dssp HHHHHHHHHTTCCCCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH--HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCHHH--HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcccee--hHHHHHHHHCCCHHHHHHHHHH
Confidence 357888888888766532 24567777888876555444 445766654332 244555677777544 444
Q ss_pred HHhcCCCCCcCCCCCCcHHHHHHhcCChHHHHHHHh
Q psy14007 87 LIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLT 122 (198)
Q Consensus 87 l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~ 122 (198)
+.+.|..++... -.+.+...++.|..+-+..+++
T Consensus 166 M~~~G~~Pd~~t--y~~Li~~~~~~g~~d~A~~ll~ 199 (501)
T 4g26_A 166 MVESEVVPEEPE--LAALLKVSMDTKNADKVYKTLQ 199 (501)
T ss_dssp HHHTTCCCCHHH--HHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHhcCCCCCHHH--HHHHHHHHhhCCCHHHHHHHHH
Confidence 556676654432 2345555677888766555544
No 118
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=53.46 E-value=66 Score=24.26 Aligned_cols=49 Identities=12% Similarity=0.183 Sum_probs=38.5
Q ss_pred HHHhcCcHHHHHHHHhCCCCCCCC--------------CCCCCCHHHHHHHcCCHHHHHHHHh
Q psy14007 8 WAALSGREDVVDFLLKNKSPVDPK--------------DDTNRTPLILAAAAGKLEIVRLLIS 56 (198)
Q Consensus 8 ~A~~~g~~~~~~~l~~~~~~~~~~--------------~~~g~~~L~~A~~~~~~~~~~~L~~ 56 (198)
..+.-|+...|+.-+..|.++... -.-|.|.+|.|++..+.+++..|+.
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 345678888999888887765432 2358899999999999999999876
No 119
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=39.10 E-value=1e+02 Score=23.26 Aligned_cols=48 Identities=19% Similarity=0.325 Sum_probs=36.2
Q ss_pred HHHcCCHHHHHHHHhcCCCcccc--------------CCCCCcHHHHHHhcChHHHHHHHHh
Q psy14007 42 AAAAGKLEIVRLLISNGADVNAK--------------ADGGHSALQYACSKGWKEIAELLIH 89 (198)
Q Consensus 42 A~~~~~~~~~~~L~~~~~~~~~~--------------~~~~~t~l~~a~~~~~~~~~~~l~~ 89 (198)
.+..|+...|+..+.+|.+++.+ -..|.|.+|+|++..+.+++..|+.
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 34468899999888887776532 1258899999999988888887775
Done!