RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14007
(198 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 127 bits (320), Expect = 7e-36
Identities = 58/201 (28%), Positives = 78/201 (38%), Gaps = 35/201 (17%)
Query: 6 IHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKA 65
+H A+ G +V LL+ + + + TPL +AA AG E+ + L+ N A VNAKA
Sbjct: 4 LHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKA 63
Query: 66 DGGHSALQYACSKGWKEIAELLIHNHANV------------------------------- 94
+ L A G + +LL+ N+AN
Sbjct: 64 KDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEA 123
Query: 95 --NIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDA 152
+G TPLH AA G V +LLL + D N G TPLH A L
Sbjct: 124 SQACMTKKGFTPLHVAAKYGKVRVAELLLER--DAHPNAAGKNGLTPLHVAVHHNNLDIV 181
Query: 153 KLLVRCGARLDIQNKEKKTPL 173
KLL+ G TPL
Sbjct: 182 KLLLPRGGSPHSPAWNGYTPL 202
Score = 114 bits (286), Expect = 5e-31
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Query: 6 IHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKA 65
+H AA G+ V + LL+ + + TPL +A L+IV+LL+ G ++ A
Sbjct: 136 LHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPA 195
Query: 66 DGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRL 125
G++ L A + E+A L+ + N + V+G TPLH AA +G +V L
Sbjct: 196 WNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVA--LLLSK 253
Query: 126 DIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPL 173
+ N+ + G TPLH +E + A +L++ G +D + TPL
Sbjct: 254 QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPL 301
Score = 112 bits (280), Expect = 3e-30
Identities = 49/170 (28%), Positives = 67/170 (39%), Gaps = 31/170 (18%)
Query: 37 TPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNI 96
TPL +A+ G L IV+ L+ GA N + L A G E+A+ L+ N A VN
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61
Query: 97 QDVRGATPLHRAASQGITPVVKLLLTQRLDI----------------------------- 127
+ TPLH AA G T +VKLLL +
Sbjct: 62 KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 121
Query: 128 --DVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDL 175
G TPLH A + ++ A+LL+ A + K TPL +
Sbjct: 122 EASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHV 171
Score = 109 bits (272), Expect = 4e-29
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 5/169 (2%)
Query: 6 IHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKA 65
+H AA G ++V LL ++ + + + TPL L A G + + +LI +G V+A
Sbjct: 235 LHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATT 294
Query: 66 DGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRL 125
G++ L A G ++ + L+ + A+VN + G +PLH+AA QG T +V LLL
Sbjct: 295 RMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKN-- 352
Query: 126 DIDVNITDAYGNTPLHYACEEKRLTDAKLLVRC---GARLDIQNKEKKT 171
N + G TPL A ++ +L + + + +K + +
Sbjct: 353 GASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMS 401
Score = 105 bits (262), Expect = 1e-27
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 35/203 (17%)
Query: 6 IHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISN-------- 57
+H AA +G +V +LL+NK+ V+ K ++TPL AA G +V+LL+ N
Sbjct: 37 LHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLAT 96
Query: 58 -------------------------GADVNAKADGGHSALQYACSKGWKEIAELLIHNHA 92
A G + L A G +AELL+ A
Sbjct: 97 TAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDA 156
Query: 93 NVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDA 152
+ N G TPLH A +VKLLL + + G TPLH A ++ ++ A
Sbjct: 157 HPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR--GGSPHSPAWNGYTPLHIAAKQNQVEVA 214
Query: 153 KLLVRCGARLDIQNKEKKTPLDL 175
+ L++ G + ++ + TPL L
Sbjct: 215 RSLLQYGGSANAESVQGVTPLHL 237
Score = 104 bits (259), Expect = 4e-27
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 31/206 (15%)
Query: 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGAD 60
N +H A D+V LL TPL +AA ++E+ R L+ G
Sbjct: 164 NGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS 223
Query: 61 VNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLL 120
NA++ G + L A +G E+ LL+ AN N+ + G TPLH A +G PV +L
Sbjct: 224 ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVL 283
Query: 121 LTQRLDIDV-------------------------------NITDAYGNTPLHYACEEKRL 149
+ + +D N G +PLH A ++
Sbjct: 284 IKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHT 343
Query: 150 TDAKLLVRCGARLDIQNKEKKTPLDL 175
LL++ GA + + + TPL +
Sbjct: 344 DIVTLLLKNGASPNEVSSDGTTPLAI 369
Score = 94.3 bits (233), Expect = 1e-23
Identities = 52/167 (31%), Positives = 71/167 (42%), Gaps = 2/167 (1%)
Query: 7 HWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKAD 66
H AA G + V LL+ ++ TPL +AA GK+ + LL+ A NA
Sbjct: 104 HIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGK 163
Query: 67 GGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLD 126
G + L A +I +LL+ + + G TPLH AA Q V + LL
Sbjct: 164 NGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYG-- 221
Query: 127 IDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPL 173
N G TPLH A +E LL+ A ++ NK TPL
Sbjct: 222 GSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPL 268
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 108 bits (269), Expect = 2e-29
Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 27 PVDPKDDTNRTPLILAAAAGKLEIVRLLISN-GADVNAKADGGHSALQYAC----SKGWK 81
+ T L+ AA G +E++++L+ GADVNA + G +AL +A +
Sbjct: 140 DQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVE 199
Query: 82 EIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLH 141
I LL+ + A+VN++ RG TPL A + +V+ LL Q I++N TD+ G T L
Sbjct: 200 AITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE-HIEINDTDSDGKTALL 258
Query: 142 YACEEKRLTDAKLLVRCGARLDIQN 166
A E K A+LL + GA D +
Sbjct: 259 LAVELKLKKIAELLCKRGASTDCGD 283
Score = 90.8 bits (224), Expect = 7e-23
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
Query: 6 IHWAALSGREDVVDFLLKNK-SPVDPKDDTNRTPLILAAAAGK----LEIVRLLISNGAD 60
+ AA G +V+ LL + V+ D+ R LI A + I LL+ +GAD
Sbjct: 152 LMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD 211
Query: 61 VNAKADGGHSALQYACSKGWKEIAELLI-HNHANVNIQDVRGATPLHRAASQGITPVVKL 119
VN + + G + L A K + + L+ H +N D G T L A + + +L
Sbjct: 212 VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAEL 271
Query: 120 LLTQRLDIDVNITD 133
L + + D
Sbjct: 272 LCKR--GASTDCGD 283
Score = 80.8 bits (198), Expect = 4e-19
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 15 EDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLIS-NGADVNAKADGGHSALQ 73
E + LL + + V+ + + +TPLILA L +V+ L+ ++N G +AL
Sbjct: 199 EAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALL 258
Query: 74 YACSKGWKEIAELLIHNHANVNIQDV 99
A K+IAELL A+ + D+
Sbjct: 259 LAVELKLKKIAELLCKRGASTDCGDL 284
Score = 78.5 bits (192), Expect = 3e-18
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 14/183 (7%)
Query: 7 HWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAK-- 64
AA++G ++ L + V+ D T + AA GK++ ++ L GA+VN +
Sbjct: 77 LLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRK 136
Query: 65 --------ADGGHSALQYACSKGWKEIAELLI-HNHANVNIQDVRGATPLHRAASQGITP 115
GG +AL A KG E+ ++L+ A+VN D G L A
Sbjct: 137 TKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDS 196
Query: 116 VVKLLLTQRLD--IDVNITDAYGNTPLHYACEEKRLTDAK-LLVRCGARLDIQNKEKKTP 172
V+ + LD DVN+ G TPL A E+K L + LL + ++ + + KT
Sbjct: 197 DVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTA 256
Query: 173 LDL 175
L L
Sbjct: 257 LLL 259
Score = 78.5 bits (192), Expect = 3e-18
Identities = 58/219 (26%), Positives = 87/219 (39%), Gaps = 49/219 (22%)
Query: 5 LIHWAALSGREDVVDFLLKNKSPVDPKDDTN-RTPLILAAAAGKLEIVRLLI-------- 55
L+ A + D+V LL+ + V+ +++ TPL A + +IV LL+
Sbjct: 8 LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL 67
Query: 56 -------------------------SNGADVNAKADGGHSALQYACSKGWKEIAELLIHN 90
S GADVN G +A A G + + L
Sbjct: 68 RKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR 127
Query: 91 HANVNIQDVR----------GATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPL 140
ANVN++ GAT L AA +G V+K+LL + DVN D G L
Sbjct: 128 GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEM-GADVNACDNMGRNAL 186
Query: 141 HYACEEKRLTDA----KLLVRCGARLDIQNKEKKTPLDL 175
+A +D LL+ GA ++++ + KTPL L
Sbjct: 187 IHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLIL 225
Score = 72.7 bits (177), Expect = 4e-16
Identities = 37/177 (20%), Positives = 64/177 (36%), Gaps = 43/177 (24%)
Query: 35 NRTPLILAAAAGKLEIVRLLISNGADVNAKAD-GGHSALQYACSKGWKEIAELLIHNHA- 92
+ LI A +++V+ L+ GA+VN + + GG + L A ++I ELL+ + A
Sbjct: 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD 64
Query: 93 --------------------------------NVNIQDVRGATPLHRAASQGITPVVKLL 120
+VN D G T AA G +K L
Sbjct: 65 PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFL 124
Query: 121 LTQRLDID--------VNITDAYGNTPLHYACEEKRLTDAKLLV-RCGARLDIQNKE 168
+ +++ G T L A E+ + K+L+ GA ++ +
Sbjct: 125 YKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNM 181
Score = 45.3 bits (106), Expect = 1e-06
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 99 VRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRC 158
V L +A +V+ LL +++ + G TPLH A + R +LL+R
Sbjct: 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNF-QEEEGGWTPLHNAVQMSREDIVELLLRH 61
Score = 34.9 bits (79), Expect = 0.004
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 136 GNTPLHYACEEKRLTDAKLLVRCGARLDIQNKE-KKTPL 173
N L A + + + + L+ GA ++ Q +E TPL
Sbjct: 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPL 43
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 103 bits (258), Expect = 2e-28
Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 36/206 (17%)
Query: 4 LLIHWAALSGR-EDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLE------------- 49
L++ A SG+ E++ + +L +KS D +RT L A +AG E
Sbjct: 5 LMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVN 64
Query: 50 --------------------IVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIH 89
IV+ L+ GA VNA G + L YA SK EIA +L+
Sbjct: 65 DKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLE 124
Query: 90 NHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRL 149
AN + +D AT +HRAA++G ++ +L NI D GNTPLH AC+E+R+
Sbjct: 125 GGANPDAKDHYEATAMHRAAAKGNLKMIHIL--LYYKASTNIQDTEGNTPLHLACDEERV 182
Query: 150 TDAKLLVRCGARLDIQNKEKKTPLDL 175
+AKLLV GA + I+NKE+KTPL +
Sbjct: 183 EEAKLLVSQGASIYIENKEEKTPLQV 208
Score = 94.6 bits (234), Expect = 8e-25
Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 6 IHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKA 65
+H AA +GR+++V LL + V+ + TPL AA+ + EI +L+ GA+ +AK
Sbjct: 74 LHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKD 133
Query: 66 DGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRL 125
+A+ A +KG ++ +L++ A+ NIQD G TPLH A + KLL++Q
Sbjct: 134 HYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQ-- 191
Query: 126 DIDVNITDAYGNTPLHYACEEKRLTDAKLLV 156
+ I + TPL A + K +V
Sbjct: 192 GASIYIENKEEKTPLQVA-KGGLGLILKRMV 221
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 90.9 bits (224), Expect = 9e-23
Identities = 32/226 (14%), Positives = 71/226 (31%), Gaps = 52/226 (23%)
Query: 1 NERLLIHWAALSGREDVVDFLLKNKSPVD-PKDDTNRTPLILAAAAGKLEIVRLLISNGA 59
+ + H + S ++V D + ++ P D+ TPL + LE+V+ L+ +G+
Sbjct: 72 SNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGS 131
Query: 60 DVNAK-----------------------------------------ADGGHSALQYACSK 78
+ H + +
Sbjct: 132 NRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMT 191
Query: 79 GWKEIAE---------LLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRL-DID 128
G A+ ++ + + + + + +++ L + +
Sbjct: 192 GCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANM 251
Query: 129 VNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLD 174
+N D+ G+T L+ A ++ L+ GA I NK P+D
Sbjct: 252 LNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVD 297
Score = 73.5 bits (179), Expect = 2e-16
Identities = 30/191 (15%), Positives = 51/191 (26%), Gaps = 55/191 (28%)
Query: 6 IHWAALSGREDVVDFLLKN-------------------------------------KSPV 28
+HW ++V L+K+ +
Sbjct: 111 LHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCL 170
Query: 29 DPKDDTNRTPLILAAAAGKLE-------------IVRLLISNGADVNAKADGGHSALQYA 75
+D NRT L + + ++ + + + S
Sbjct: 171 ILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDK 230
Query: 76 CSKGWKEIAELLIHNH---ANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNIT 132
+ I E L +N QD G T L+ AA G +V LL D I
Sbjct: 231 NGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYG--ADPFIA 288
Query: 133 DAYGNTPLHYA 143
+ G P+ +
Sbjct: 289 NKSGLRPVDFG 299
Score = 64.3 bits (155), Expect = 4e-13
Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 4/107 (3%)
Query: 7 HWAALSGREDVVDFLLK-NKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISN---GADVN 62
AA + ++ +++K P+ + + K I+ L +N
Sbjct: 194 SAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLN 253
Query: 63 AKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAA 109
A+ G + L A G I + L+ A+ I + G P+ A
Sbjct: 254 AQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300
Score = 61.2 bits (147), Expect = 4e-12
Identities = 14/78 (17%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 1 NERLLIHWAALSGREDVVDFLLKN---KSPVDPKDDTNRTPLILAAAAGKLEIVRLLISN 57
+ + ++ +++ L + ++ +D T L +AA G + IV L+
Sbjct: 222 EKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDY 281
Query: 58 GADVNAKADGGHSALQYA 75
GAD G + +
Sbjct: 282 GADPFIANKSGLRPVDFG 299
Score = 38.1 bits (87), Expect = 3e-04
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 6 IHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAA 43
++ AA G +VD LL + + + P+ A
Sbjct: 263 LNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 86.9 bits (214), Expect = 5e-21
Identities = 25/174 (14%), Positives = 49/174 (28%), Gaps = 6/174 (3%)
Query: 16 DVVDFLLKNKSPVDPKDDTNRTPLILAAAAG---KLEIVRLLISNGADVNAKADGGHSAL 72
+ S K + +AA G L+ + LL+++ V + A
Sbjct: 71 HYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAF 130
Query: 73 QYACSKGWKEIAELLIHNHANVNIQDVR--GATPLHRAASQGITPVVKLLLTQRLDIDVN 130
+ A G + L + ++ AA G V+ L
Sbjct: 131 RLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATA 190
Query: 131 ITDAYGNTPLHYACEEKRLTD-AKLLVRCGARLDIQNKEKKTPLDLLPLPHLAQ 183
+ A +A + + L+ C L + + P +A+
Sbjct: 191 MIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIAR 244
Score = 84.9 bits (209), Expect = 2e-20
Identities = 26/178 (14%), Positives = 41/178 (23%), Gaps = 16/178 (8%)
Query: 5 LIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNA- 63
LI W F+ N+ + + L ++ +LL A N
Sbjct: 18 LIPWILWENL--FQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRN 75
Query: 64 ----------KADGGHSALQYACSKGWK---EIAELLIHNHANVNIQDVRGATPLHRAAS 110
K A G + LL+ + V + AA
Sbjct: 76 AKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAE 135
Query: 111 QGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKE 168
G V+ L + + A A E L L +
Sbjct: 136 NGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQ 193
Score = 82.2 bits (202), Expect = 2e-19
Identities = 29/170 (17%), Positives = 46/170 (27%), Gaps = 17/170 (10%)
Query: 1 NERLLIHWAALSGREDVVD---FLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISN 57
++ AA++G +D LL + V N LAA G L ++ L
Sbjct: 89 KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCEL 148
Query: 58 GADVNAK--ADGGHSALQYACSKGWKEIAELLIHNHANVN---IQDVRGATPLHRAASQG 112
+ A + A G + L IQ A +G
Sbjct: 149 APTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRG 208
Query: 113 ITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARL 162
V+ LL + + + E + R RL
Sbjct: 209 HHNVINFLLDCPVML---------AYAEIHEFEYGEKYVNPFIARHVNRL 249
Score = 78.8 bits (193), Expect = 4e-18
Identities = 25/196 (12%), Positives = 51/196 (26%), Gaps = 20/196 (10%)
Query: 6 IHWAALSGREDVVDFLLKNKSPVDPKDDT--NRTPLILAAAAGKLEIVRLLISNGADVN- 62
AA +G V++ L + N LAA G L ++ L
Sbjct: 130 FRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEAT 189
Query: 63 --AKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQ-------GI 113
+A+ ++ A +G + L+ + ++ + + +
Sbjct: 190 AMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRL 249
Query: 114 TPVVKLLL-------TQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQN 166
+ + + Y L +E L D + L+ +
Sbjct: 250 KEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAP 309
Query: 167 KEKKTPLDLLPLPHLA 182
L LA
Sbjct: 310 TATIPGDANELL-RLA 324
Score = 66.5 bits (161), Expect = 7e-14
Identities = 21/157 (13%), Positives = 43/157 (27%), Gaps = 20/157 (12%)
Query: 6 IHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKA 65
A G +V++FLL + I G+ + + + +
Sbjct: 201 RWAAVGRGHHNVINFLLDCPVMLA-------YAEIHEFEYGEKYVNPFIARHVNRLKE-- 251
Query: 66 DGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQ-- 123
H A + + G ++ + +Q L R + + ++ LL+
Sbjct: 252 --MHDAFKLSNPDGVFDLVT------KSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPG 303
Query: 124 -RLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCG 159
+ N L A LL+
Sbjct: 304 IKALAPTATIPGDANELLRLALRLGNQGACALLLSIP 340
Score = 54.9 bits (131), Expect = 9e-10
Identities = 14/89 (15%), Positives = 24/89 (26%), Gaps = 11/89 (12%)
Query: 5 LIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAK 64
+ G D+V + LI L+ +R L+S
Sbjct: 255 AFKLSNPDGVFDLVTKS------ECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALA 308
Query: 65 ADG-----GHSALQYACSKGWKEIAELLI 88
+ L+ A G + LL+
Sbjct: 309 PTATIPGDANELLRLALRLGNQGACALLL 337
Score = 43.3 bits (101), Expect = 6e-06
Identities = 15/63 (23%), Positives = 19/63 (30%), Gaps = 6/63 (9%)
Query: 6 IHWAALSGREDVVDFLL-----KNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGAD 60
+ D + FLL K +P L LA G LL+S
Sbjct: 283 LIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP-S 341
Query: 61 VNA 63
V A
Sbjct: 342 VLA 344
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 80.5 bits (197), Expect = 5e-19
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 6/113 (5%)
Query: 54 LISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGI 113
L S + A G +AL A +KG+ E+ +LLI +VNI+D G TPLH AA G
Sbjct: 185 LNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGK 244
Query: 114 TPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQN 166
++L+ D+ + G T A E+ L + ++ +
Sbjct: 245 EEACRILVENL--CDMEAVNKVGQTAFDVADEDIL----GYLEELQKKQNLLH 291
Score = 76.7 bits (187), Expect = 1e-17
Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 4/105 (3%)
Query: 17 VVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYAC 76
+L + T L +AAA G E+++LLI DVN K G + L A
Sbjct: 181 ARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAA 240
Query: 77 SKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLL 121
G +E +L+ N ++ + G T A ++ L
Sbjct: 241 HWGKEEACRILVENLCDMEAVNKVGQTAFDVADED----ILGYLE 281
Score = 70.9 bits (172), Expect = 2e-15
Identities = 27/82 (32%), Positives = 39/82 (47%)
Query: 6 IHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKA 65
+H AA G +V+ L++ + V+ KD TPL AA GK E R+L+ N D+ A
Sbjct: 203 LHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVN 262
Query: 66 DGGHSALQYACSKGWKEIAELL 87
G +A A + EL
Sbjct: 263 KVGQTAFDVADEDILGYLEELQ 284
Score = 67.4 bits (163), Expect = 2e-14
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Query: 74 YACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITD 133
++ + L H N G T LH AA++G T V+KLL + DVNI D
Sbjct: 172 EEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL--IQARYDVNIKD 229
Query: 134 AYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDL 175
G TPLH A + ++LV ++ NK +T D+
Sbjct: 230 YDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDV 271
Score = 60.5 bits (145), Expect = 9e-12
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Query: 10 ALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGH 69
G E ++ + + K D + + A ++G E V L+ GAD+N G
Sbjct: 16 RWIGSETDLEPPVVKRKKTKVKFD-DGAVFLAACSSGDTEEVLRLLERGADINYANVDGL 74
Query: 70 SALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDV 129
+AL AC ++ + L+ N AN+N D G PLH AAS G + + L V
Sbjct: 75 TALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYL--ISQGAHV 132
Query: 130 NITDAYGNTPLHYACEE 146
++ G+TPL A EE
Sbjct: 133 GAVNSEGDTPLDIAEEE 149
Score = 57.0 bits (136), Expect = 1e-10
Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 25/196 (12%)
Query: 5 LIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAK 64
+ A SG + V LL+ + ++ + T L A +++V+ L+ NGA++N
Sbjct: 43 VFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQP 102
Query: 65 ADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLT-- 122
+ G L A S G+ +IAE LI A+V + G TPL A + + +++ +
Sbjct: 103 DNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQ 162
Query: 123 -----------------------QRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCG 159
I+ G T LH A + KLL++
Sbjct: 163 GVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR 222
Query: 160 ARLDIQNKEKKTPLDL 175
++I++ + TPL
Sbjct: 223 YDVNIKDYDGWTPLHA 238
Score = 35.9 bits (81), Expect = 0.002
Identities = 8/40 (20%), Positives = 13/40 (32%)
Query: 136 GNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDL 175
AC + L+ GA ++ N + T L
Sbjct: 40 DGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQ 79
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 74.4 bits (181), Expect = 8e-17
Identities = 26/84 (30%), Positives = 42/84 (50%)
Query: 5 LIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAK 64
L + A +S V + + S D +D+ +TP++LAA G++E+V LI GA V A
Sbjct: 191 LHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAV 250
Query: 65 ADGGHSALQYACSKGWKEIAELLI 88
H+A Q A + I ++
Sbjct: 251 DATDHTARQLAQANNHHNIVDIFD 274
Score = 69.4 bits (168), Expect = 5e-15
Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 3/105 (2%)
Query: 55 ISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNH-ANVNIQDVRGATPLHRAASQGI 113
A +++ G +AL YA I + L+ +N + QD G TP+ AA +G
Sbjct: 174 YDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGR 233
Query: 114 TPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRC 158
VV L+ Q V DA +T A + RC
Sbjct: 234 IEVVMYLIQQG--ASVEAVDATDHTARQLAQANNHHNIVDIFDRC 276
Score = 69.0 bits (167), Expect = 7e-15
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Query: 28 VDPKDDTNRTPLILAAAAGKLEIVRLLIS-NGADVNAKADGGHSALQYACSKGWKEIAEL 86
D + RT L AA + IV+ L+ G++ + + + G + + A +G E+
Sbjct: 180 KDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMY 239
Query: 87 LIHNHANVNIQDVRGATPLHRAASQGITPVVKLLL 121
LI A+V D T A + +V +
Sbjct: 240 LIQQGASVEAVDATDHTARQLAQANNHHNIVDIFD 274
Score = 64.0 bits (154), Expect = 4e-13
Identities = 45/230 (19%), Positives = 78/230 (33%), Gaps = 56/230 (24%)
Query: 1 NERLLIHWAALSGREDVVDFLLKNKSP--------VDPKDDTNRTPLILAAAAGKLEIVR 52
+ R ++HW A + + + L+ +++ V+ D TPL+LA A + +V
Sbjct: 32 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVA 91
Query: 53 LLISNGADVNAKADGGHSALQYACSKGWKEIAELLI------------------------ 88
L+ GAD SAL A + + ++
Sbjct: 92 YLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVA 151
Query: 89 -----------------------HNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRL 125
A + + +G T LH AA P+VK L
Sbjct: 152 HNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYL-VGEK 210
Query: 126 DIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDL 175
+ + D G TP+ A +E R+ L++ GA ++ + T L
Sbjct: 211 GSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQL 260
Score = 58.2 bits (139), Expect = 5e-11
Identities = 18/79 (22%), Positives = 28/79 (35%), Gaps = 10/79 (12%)
Query: 37 TPLILAAAA-GKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNH---- 91
+P+ L A G I + ++ + L + S E +E LI +
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 60
Query: 92 ----ANVNIQDVRGATPLH 106
A+VN D TPL
Sbjct: 61 IAAGADVNAMDCDENTPLM 79
Score = 57.1 bits (136), Expect = 1e-10
Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 12/129 (9%)
Query: 4 LLIHWAALSGREDVVDFLLKNK-SPVDPKDDTNRTPLILAAAAGKLEIVRLL-------- 54
+ +H A +G + + + + + +DP+ NRT L A+ E L
Sbjct: 4 IKLHTEA-AGSYAITEPITRESVNIIDPRH--NRTVLHWIASNSSAEKSEDLIVHEAKEC 60
Query: 55 ISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGIT 114
I+ GADVNA ++ L A + + L+ A+ I + + LH+AA+
Sbjct: 61 IAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF 120
Query: 115 PVVKLLLTQ 123
++ +L
Sbjct: 121 GMMVYMLNS 129
Score = 48.2 bits (113), Expect = 1e-07
Identities = 15/81 (18%), Positives = 32/81 (39%), Gaps = 14/81 (17%)
Query: 103 TPLH-RAASQGITPVVKLLLTQRLDIDVNITDA-YGNTPLHYACEEKRLTDAKLLVR--- 157
+P+ + G + + + + VNI D + T LH+ ++ L+
Sbjct: 2 SPIKLHTEAAGSYAITEPITRE----SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEA 57
Query: 158 -----CGARLDIQNKEKKTPL 173
GA ++ + ++ TPL
Sbjct: 58 KECIAAGADVNAMDCDENTPL 78
Score = 26.6 bits (57), Expect = 1.8
Identities = 3/18 (16%), Positives = 7/18 (38%)
Query: 6 IHWAALSGREDVVDFLLK 23
A + ++VD +
Sbjct: 258 RQLAQANNHHNIVDIFDR 275
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 71.4 bits (173), Expect = 4e-16
Identities = 43/194 (22%), Positives = 70/194 (36%), Gaps = 37/194 (19%)
Query: 17 VVDFLLKNKSPVDPKDDTN-RTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYA 75
V+ LL + ++ D T L LAA + + + L+ GAD N++ + G + L A
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63
Query: 76 CSKGW----------------------------------KEIAELLIHNHANVNIQDVRG 101
+ + + E LI A++N D G
Sbjct: 64 VAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSG 123
Query: 102 ATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGAR 161
T LH AA+ T V + + + D TPL A E +K L+ A
Sbjct: 124 KTALHWAAAVNNTEAVNI--LLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFAN 181
Query: 162 LDIQNKEKKTPLDL 175
+I + + P D+
Sbjct: 182 REITDHMDRLPRDV 195
Score = 68.3 bits (165), Expect = 5e-15
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Query: 54 LISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGI 113
LI+ AD+NA + G +AL +A + E +L+ +HAN + QD + TPL AA +G
Sbjct: 109 LITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGS 168
Query: 114 TPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLL 155
K LL + ITD P A E +LL
Sbjct: 169 YEASKALLDNF--ANREITDHMDRLPRDVASERLHHDIVRLL 208
Score = 67.1 bits (162), Expect = 1e-14
Identities = 32/114 (28%), Positives = 56/114 (49%)
Query: 7 HWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKAD 66
AA E +V+ L+ + ++ D++ +T L AAA E V +L+ + A+ +A+ D
Sbjct: 95 ILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDD 154
Query: 67 GGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLL 120
+ L A +G E ++ L+ N AN I D P A+ + +V+LL
Sbjct: 155 KDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 208
Score = 60.2 bits (144), Expect = 5e-12
Identities = 25/82 (30%), Positives = 37/82 (45%)
Query: 6 IHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKA 65
+HWAA + V+ LL + + D +DD + TPL LAA G E + L+ N A+
Sbjct: 127 LHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITD 186
Query: 66 DGGHSALQYACSKGWKEIAELL 87
A + +I LL
Sbjct: 187 HMDRLPRDVASERLHHDIVRLL 208
Score = 45.2 bits (105), Expect = 1e-06
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 81 KEIAELLIHNHANVNI-QDVRGATPLHRAASQGITPVVKLL 120
++ L+ A +N D G T LH AA K L
Sbjct: 2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRL 42
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 71.3 bits (173), Expect = 8e-16
Identities = 48/219 (21%), Positives = 71/219 (32%), Gaps = 49/219 (22%)
Query: 6 IHWAALSGREDVVDFLLK---NKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVN 62
+H A + E +DFLL +D ++D +T L LAA G+ V L + GA V
Sbjct: 13 LHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVL 72
Query: 63 AKADGGHSALQYACSKGWKEIAELLIHNHANVNIQ--------------DVRGATPLHRA 108
GGH+AL AC A +L+ + D A +
Sbjct: 73 VAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDS 132
Query: 109 ASQGITPVVKLLLTQRLDIDVNITD--------------------------------AYG 136
RL ++ D G
Sbjct: 133 QPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCG 192
Query: 137 NTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTPLDL 175
TPLH A E + + +LL++ GA + +TPL
Sbjct: 193 RTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGS 231
Score = 70.5 bits (171), Expect = 1e-15
Identities = 38/172 (22%), Positives = 52/172 (30%), Gaps = 17/172 (9%)
Query: 7 HWAALSGREDVVDFLLKNKSPV-------------DPKDDTNRTPLILAAAA-GKLEIVR 52
H A LL+ + D DT+ P + + + E
Sbjct: 83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEP 142
Query: 53 LLISNGADVNAKADGGHSALQYACSKGWKEIAELLI-HNHANVNIQDVRGATPLHRAASQ 111
+ A+ GH+ L A E+ LL + G TPLH A
Sbjct: 143 RDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEA 202
Query: 112 GITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLD 163
V++LLL D G TPL A A+LL GA
Sbjct: 203 QAASVLELLLKAG--ADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP 252
Score = 68.2 bits (165), Expect = 1e-14
Identities = 30/157 (19%), Positives = 48/157 (30%), Gaps = 15/157 (9%)
Query: 31 KDDTNRTPLILAAAAGKLEIVRLLISNGAD---VNAKADGGHSALQYACSKGWKEIAELL 87
+ T L LA + L+ A ++ + D G +AL A G E L
Sbjct: 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL 64
Query: 88 IHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTP-------- 139
A V + + G T LH A +LL R + +D Y
Sbjct: 65 YAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTS 124
Query: 140 ----LHYACEEKRLTDAKLLVRCGARLDIQNKEKKTP 172
+ + +L+ +N + TP
Sbjct: 125 HAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP 161
Score = 56.3 bits (134), Expect = 2e-10
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 6 IHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVN 62
+H A + V++ LLK + + RTPL A + RLL ++GA
Sbjct: 196 LHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP 252
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 69.1 bits (167), Expect = 1e-15
Identities = 35/151 (23%), Positives = 57/151 (37%), Gaps = 34/151 (22%)
Query: 37 TPLILAAAAGKLEIVRLLISNGADVNAKADG----------------------------- 67
L+ AA AG+ + VR+L++NGA G
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63
Query: 68 ---GHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQR 124
+ L A S+G I E+L+ + A+VN +D+ T LH A VV+ L +
Sbjct: 64 TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVE--LLIK 121
Query: 125 LDIDVNITDAYGNTPLHYACEEKRLTDAKLL 155
DV+ + T + + A++L
Sbjct: 122 YGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 57.2 bits (136), Expect = 3e-11
Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 32/147 (21%)
Query: 6 IHWAALSGREDVVDFLLKNKSPVD--------------------------------PKDD 33
+ AA +G++D V L+ N +P +
Sbjct: 6 LLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTK 65
Query: 34 TNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHAN 93
+RTPL +AA+ G IV +L+ +GADVNAK +AL +A +E+ ELLI A+
Sbjct: 66 VDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD 125
Query: 94 VNIQDVRGATPLHRAASQGITPVVKLL 120
V+ Q T + G + ++L
Sbjct: 126 VHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 30.6 bits (67), Expect = 0.064
Identities = 5/31 (16%), Positives = 10/31 (32%)
Query: 136 GNTPLHYACEEKRLTDAKLLVRCGARLDIQN 166
L A + + ++L+ GA
Sbjct: 2 LGKKLLEAARAGQDDEVRILMANGAPFTTDW 32
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 69.1 bits (167), Expect = 3e-15
Identities = 58/210 (27%), Positives = 82/210 (39%), Gaps = 41/210 (19%)
Query: 6 IHWAALSGREDVVDFLLKNK-SPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADV--- 61
+H A + V LL +K S + KD R PL + + EI L+S +V
Sbjct: 4 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 63
Query: 62 -----------------------------------NAKADGGHSALQYACSKGWKEIAEL 86
N + G + L A K W E+++
Sbjct: 64 DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQF 123
Query: 87 LIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEE 146
LI N A+V I+D PLHRAAS G +++LL VN D G TPL +A E
Sbjct: 124 LIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG-KSAVNWQDKQGWTPLFHALAE 182
Query: 147 KRLTDAKLLV-RCGARLDIQNKEKKTPLDL 175
A LLV + GA D+ + + D+
Sbjct: 183 GHGDAAVLLVEKYGAEYDLVDNKGAKAEDV 212
Score = 63.3 bits (152), Expect = 4e-13
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 48 LEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLI-HNHANVNIQDVRGATPLH 106
E+ + LI NGA V K L A S G ++ ELL + VN QD +G TPL
Sbjct: 118 FEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLF 177
Query: 107 RAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGA 160
A ++G LL+ ++ + ++ D G A E+ K +
Sbjct: 178 HALAEGHGDAAVLLV-EKYGAEYDLVDNKGAKAEDVALNEQV---KKFFLNNVV 227
Score = 54.4 bits (129), Expect = 6e-10
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Query: 5 LIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISN-GADVNA 63
L A++ + + KS V+ +D TPL A A G + LL+ GA+ +
Sbjct: 142 LHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDL 201
Query: 64 KADGGHSALQYACSKGWKEIAELLIHNHAN 93
+ G A A + +++ + ++N +
Sbjct: 202 VDNKGAKAEDVALN---EQVKKFFLNNVVD 228
Score = 54.1 bits (128), Expect = 9e-10
Identities = 40/141 (28%), Positives = 58/141 (41%), Gaps = 4/141 (2%)
Query: 37 TPLILAAAAGKLEIVR-LLISNGADVNAKADGGHSALQYACSKG---WKEIAELLIHNHA 92
PL A + V+ LL S + + K G L ++ S + N
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61
Query: 93 NVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDA 152
+ D G TP H A S G VVK L + L D+N G T LH A +K +
Sbjct: 62 LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121
Query: 153 KLLVRCGARLDIQNKEKKTPL 173
+ L+ GA + I++K + PL
Sbjct: 122 QFLIENGASVRIKDKFNQIPL 142
Score = 41.3 bits (95), Expect = 3e-05
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 137 NTPLHYACEEKRLTDAK-LLVRCGARLDIQNKEKKTPLDL 175
N PLH AC E + LL + L ++++ + PL
Sbjct: 1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHW 40
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 66.8 bits (161), Expect = 3e-14
Identities = 31/114 (27%), Positives = 55/114 (48%)
Query: 5 LIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAK 64
L +E V L + + R+PLI A L +V+LL+ +GA+VNA+
Sbjct: 114 LHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQ 173
Query: 65 ADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVK 118
G SAL A +G + L+ + A+ ++++ TPL A S+ + +++
Sbjct: 174 MYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 59.5 bits (142), Expect = 1e-11
Identities = 43/211 (20%), Positives = 74/211 (35%), Gaps = 42/211 (19%)
Query: 6 IHWAALSGREDVVDFLLK----NKSPVDPKDDTNRTPLILAAAA---------------- 45
+H A + G V L+ +D ++ +TPL LA
Sbjct: 7 LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP 66
Query: 46 -----------------GKLEIVRLLISNGADVNAKADG----GHSALQYACSKGWKEIA 84
+R L+ + A + G +AL A + +E
Sbjct: 67 MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV 126
Query: 85 ELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYAC 144
+LL+ A+++ D++ A + + + LL Q +VN G++ LH A
Sbjct: 127 QLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQH-GANVNAQMYSGSSALHSAS 185
Query: 145 EEKRLTDAKLLVRCGARLDIQNKEKKTPLDL 175
L + LVR GA ++N TPL +
Sbjct: 186 GRGLLPLVRTLVRSGADSSLKNCHNDTPLMV 216
Score = 59.1 bits (141), Expect = 2e-11
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 53 LLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQG 112
LL G S L +A + +LL+ + ANVN Q G++ LH A+ +G
Sbjct: 129 LLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRG 188
Query: 113 ITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRL 149
+ P+V+ L+ D ++ + + +TPL A + +
Sbjct: 189 LLPLVRTLVRS--GADSSLKNCHNDTPLMVARSRRVI 223
Score = 54.5 bits (129), Expect = 6e-10
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 101 GATPLHRAASQGITPVVKLLLTQRLD--IDVNITDAYGNTPLHYACE 145
G TPLH A QG P V L+ +++I + TPLH A
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVI 49
Score = 54.5 bits (129), Expect = 7e-10
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 6/131 (4%)
Query: 36 RTPLILAAAAGKLEIVRLLIS----NGADVNAKADGGHSALQYACSKGWKEIAELLIHNH 91
TPL +A G L V L++ G +++ + + L A + LL+
Sbjct: 4 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAG 63
Query: 92 ANVNIQDVRGATPLHRAASQGITPVVKLLLTQ--RLDIDVNITDAYGNTPLHYACEEKRL 149
A+ D G T H A ++ LL +D+ + G T LH A +
Sbjct: 64 ASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQ 123
Query: 150 TDAKLLVRCGA 160
+LL+ GA
Sbjct: 124 ETVQLLLERGA 134
Score = 46.4 bits (108), Expect = 5e-07
Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Query: 66 DGGHSALQYACSKGWKEIAELLI----HNHANVNIQDVRGATPLHRA 108
+ G + L A +G L+ ++I + TPLH A
Sbjct: 1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLA 47
Score = 43.3 bits (100), Expect = 5e-06
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 136 GNTPLHYACEEKRLTDAKLLV----RCGARLDIQNKEKKTPLDL 175
G+TPLH A + L LV + G LDI N ++TPL L
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHL 46
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 58.1 bits (139), Expect = 1e-11
Identities = 29/139 (20%), Positives = 49/139 (35%), Gaps = 11/139 (7%)
Query: 32 DDTNRTPLILAAAAGKLEIVRLLISNGADVNAKA------DGGHSALQYAC---SKGWKE 82
L A + + ++G D+ K + +AL A +
Sbjct: 3 TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLH 62
Query: 83 IAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHY 142
I + L+ N N++ Q +G+T LH +KL R + I + G TPL
Sbjct: 63 IVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKL--LLRGKASIEIANESGETPLDI 120
Query: 143 ACEEKRLTDAKLLVRCGAR 161
A K +LL + +
Sbjct: 121 AKRLKHEHCEELLTQALSG 139
Score = 57.7 bits (138), Expect = 2e-11
Identities = 29/125 (23%), Positives = 49/125 (39%), Gaps = 9/125 (7%)
Query: 6 IHWAALSGREDVVDFLLKN------KSPVDPKDDTNRTPLILAAAA---GKLEIVRLLIS 56
+ A + + + K P+ + + T L LA + L IV L+
Sbjct: 10 LCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQ 69
Query: 57 NGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPV 116
N +++ + G +AL Y C E +LL+ A++ I + G TPL A
Sbjct: 70 NSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHC 129
Query: 117 VKLLL 121
+LL
Sbjct: 130 EELLT 134
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 57.4 bits (137), Expect = 1e-11
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 1/127 (0%)
Query: 37 TPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNI 96
L+ ++ G+ ++V+ +I D + D G +AL A G EI + L+ NVN
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 97 QDVRGATPLHRAASQGITPVVKLLLTQRLDID-VNITDAYGNTPLHYACEEKRLTDAKLL 155
D G TPLH AAS V K L+ + + +D EE ++ L
Sbjct: 63 ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122
Query: 156 VRCGARL 162
++
Sbjct: 123 YGVQEKM 129
Score = 53.9 bits (128), Expect = 3e-10
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 5 LIHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAK 64
L+ ++L G D+V ++ +D T L A AG EIV+ L+ G +VNA
Sbjct: 4 LLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAA 63
Query: 65 ADGGHSALQYACSKGWKEIAELLIHNHANVNIQ---DVRGATPLHRAASQGITPVVKLLL 121
G + L A S ++ + L+ + A V D++ A +G T + L
Sbjct: 64 DSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLY 123
Query: 122 TQR 124
+
Sbjct: 124 GVQ 126
Score = 35.4 bits (80), Expect = 0.001
Identities = 7/48 (14%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Query: 17 VVDFLLKNKSPVDPKDDTN-RTPLILAAAA--GKLEIVRLLISNGADV 61
V FL+++ + V ++ +T G + + L +
Sbjct: 82 VCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKM 129
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 57.2 bits (136), Expect = 3e-11
Identities = 38/155 (24%), Positives = 57/155 (36%), Gaps = 33/155 (21%)
Query: 37 TPLILAAAAGKLEIVRLLISNGADVNAKADGG---------------------------- 68
L AAA G LE + L+ N +VNA+ G
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62
Query: 69 ----HSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQR 124
+ + A G+ + + L+ A+VNI+D G PLH AA +G VV+ L+
Sbjct: 63 DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122
Query: 125 LDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCG 159
+V + G+T A R L+ G
Sbjct: 123 -ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 43.0 bits (99), Expect = 4e-06
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 27 PVDPKDDTNRTPLILAAAAGKLEIVRLLISNG 58
V ++ T LA G+ E+V L+ +NG
Sbjct: 125 NVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 42.2 bits (97), Expect = 7e-06
Identities = 26/151 (17%), Positives = 43/151 (28%), Gaps = 33/151 (21%)
Query: 6 IHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKA 65
+ AA G + + LL+N V+ ++ RT L + RLL+
Sbjct: 5 LASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLKDR 64
Query: 66 DGGHSALQYACSKGWKE---------------------------------IAELLIHNHA 92
G A + + L+ H +
Sbjct: 65 TGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 124
Query: 93 NVNIQDVRGATPLHRAASQGITPVVKLLLTQ 123
NV ++ +G T A G VV L+
Sbjct: 125 NVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 54.8 bits (130), Expect = 2e-10
Identities = 39/153 (25%), Positives = 52/153 (33%), Gaps = 36/153 (23%)
Query: 37 TPLILAAAAGKLEIVR-LLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNH---- 91
L AAA G ++ VR LL +A G +ALQ ELL
Sbjct: 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNV 63
Query: 92 ----------------------------ANVNIQDVRGATPLHRAASQGITPVVKLLLTQ 123
A+VN+ D GA P+H A +G T VV
Sbjct: 64 QDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVS---FL 120
Query: 124 RLDIDVNITDAYGNTPLHYACEEKRLTDAKLLV 156
+ D++ DA G TPL A + +L
Sbjct: 121 AAESDLHRRDARGLTPLELALQRGAQDLVDILQ 153
Score = 44.8 bits (104), Expect = 8e-07
Identities = 30/149 (20%), Positives = 48/149 (32%), Gaps = 34/149 (22%)
Query: 6 IHWAALSGREDVVDFLL-KNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLIS-------- 56
+ AA G V LL + D + +T L + + LL
Sbjct: 6 LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQD 65
Query: 57 ------------------------NGADVNAKADGGHSALQYACSKGWKEIAELLIHNHA 92
+GADVN G + A +G + L +
Sbjct: 66 TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA-ES 124
Query: 93 NVNIQDVRGATPLHRAASQGITPVVKLLL 121
+++ +D RG TPL A +G +V +L
Sbjct: 125 DLHRRDARGLTPLELALQRGAQDLVDILQ 153
Score = 38.6 bits (88), Expect = 1e-04
Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 100 RGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYAC 144
R L AA++G V+ LL R + + + +G T L
Sbjct: 1 RAGDRLSGAAARGDVQEVRRLL-HRELVHPDALNRFGKTALQVMM 44
Score = 38.6 bits (88), Expect = 1e-04
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 28 VDPKDDTNRTPLILAAAAGKLEIVRLLIS 56
+ +D TPL LA G ++V +L
Sbjct: 126 LHRRDARGLTPLELALQRGAQDLVDILQG 154
Score = 34.4 bits (77), Expect = 0.004
Identities = 26/136 (19%), Positives = 42/136 (30%), Gaps = 32/136 (23%)
Query: 71 ALQYACSKG-WKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLLTQRLD--- 126
L A ++G +E+ LL + + + G T L ++LL
Sbjct: 5 RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQ 64
Query: 127 ---------------------------IDVNITDAYGNTPLHYACEEKRLTDAKLLVRCG 159
DVN+ D G P+H A +E L
Sbjct: 65 DTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE- 123
Query: 160 ARLDIQNKEKKTPLDL 175
+ L ++ TPL+L
Sbjct: 124 SDLHRRDARGLTPLEL 139
Score = 26.3 bits (56), Expect = 1.9
Identities = 9/38 (23%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Query: 136 GNTPLHYACEEKRLTDAK-LLVRCGARLDIQNKEKKTP 172
L A + + + LL R D N+ KT
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTA 39
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 55.7 bits (132), Expect = 3e-10
Identities = 34/183 (18%), Positives = 62/183 (33%), Gaps = 44/183 (24%)
Query: 36 RTPLILAAAAGK----LEIVRLLISNGADVNAKADGGHSALQYACSKGWKEI-------- 83
+ L LA + +E++R + + A +N + + + L A EI
Sbjct: 3 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG 62
Query: 84 -------------------------------AELLIHNHANVNIQDVRGATPLHRAASQG 112
+ H H+ + + G T LH A+ G
Sbjct: 63 CDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHG 122
Query: 113 ITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLDIQNKEKKTP 172
+V+LL++ G T LH A + + LL++CGA ++ + +P
Sbjct: 123 YLGIVELLVSLG-ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSP 181
Query: 173 LDL 175
L
Sbjct: 182 YQL 184
Score = 51.4 bits (121), Expect = 9e-09
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 1 NERLLIHWAALSGREDVVDFLLKNKSPVDPKDDTN-RTPLILAAAAGKLEIVRLLISNGA 59
N +H A++ G +V+ L+ + V+ ++ N RT L LA ++V LL+ GA
Sbjct: 110 NGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA 169
Query: 60 DVNAKADGGHSALQYACSKGWKEIAELLIHNHAN 93
DVN G+S Q + I + L
Sbjct: 170 DVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203
Score = 50.7 bits (119), Expect = 1e-08
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 35 NRTPLILAAAAGKLEIVRLLISNGADV-NAKADGGHSALQYACSKGWKEIAELLIHNHAN 93
T L LA+ G L IV LL+S GADV + G +AL A ++ LL+ A+
Sbjct: 111 GHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD 170
Query: 94 VNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDA 134
VN +G +P + T + + L L+ + ++
Sbjct: 171 VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPES 211
Score = 49.9 bits (117), Expect = 3e-08
Identities = 11/47 (23%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Query: 101 GATPLHRAASQGITPVVKLLLTQRLD--IDVNITDAYGNTPLHYACE 145
G + LH A + ++ Q +N + TPLH A
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVI 48
Score = 49.1 bits (115), Expect = 4e-08
Identities = 27/109 (24%), Positives = 38/109 (34%), Gaps = 5/109 (4%)
Query: 69 HSALQYACSKGWKEIAELLIHNHANV-NIQDVRGATPLHRAASQGITPVVKLLLTQRLDI 127
H+ L A G+ I ELL+ A+V + G T LH A +V LLL
Sbjct: 112 HTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKC--GA 169
Query: 128 DVNITDAYGNTPLHYACEEKRLTDAKLLVRCGARLD--IQNKEKKTPLD 174
DVN G +P + L + + E + D
Sbjct: 170 DVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYD 218
Score = 46.0 bits (107), Expect = 5e-07
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Query: 68 GHSALQYACSKGW----KEIAELLIHNHANVNIQDVRGATPLHRA 108
G S L A E+ + + A +N Q+ TPLH A
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLA 46
Score = 42.2 bits (97), Expect = 1e-05
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Query: 136 GNTPLHYACEEKRLTDAKLLVR----CGARLDIQNKEKKTPL 173
G++ LH A + ++R A L+ QN ++TPL
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPL 43
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 50.7 bits (119), Expect = 4e-09
Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 2/123 (1%)
Query: 33 DTNRTPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHA 92
+ + L AAA G++E VR L+ GA+ NA G +Q + LL+H
Sbjct: 1 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAE 60
Query: 93 NVNIQDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDA 152
P+H AA +G + + R +++ DA+G P+ A E A
Sbjct: 61 PNCADPATLTRPVHDAAREGFLDTLV--VLHRAGARLDVRDAWGRLPVDLAEELGHRDVA 118
Query: 153 KLL 155
+ L
Sbjct: 119 RYL 121
Score = 34.9 bits (78), Expect = 0.002
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 29 DPKDDTNRTPLILAAAAGKLEIVRLLIS 56
D +D R P+ LA G ++ R L +
Sbjct: 96 DVRDAWGRLPVDLAEELGHRDVARYLRA 123
Score = 27.6 bits (59), Expect = 0.51
Identities = 7/31 (22%), Positives = 12/31 (38%)
Query: 136 GNTPLHYACEEKRLTDAKLLVRCGARLDIQN 166
L A R+ + + L+ GA + N
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPN 33
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 48.7 bits (114), Expect = 2e-08
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Query: 37 TPLILAAAAGKLEIVRLLISNGADVNAKADGGHSALQYACSKGWKEIAELLIHNHANVNI 96
+ A G L+ V+ ++ G DVN +GG L YA G EI E L+ A++N
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63
Query: 97 QDVRGATPLHRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEE 146
D TPL A +G VK L D + G T L +
Sbjct: 64 PDKHHITPLLSAVYEGHVSCVK--LLLSKGADKTVKGPDGLTALEATDNQ 111
Score = 45.3 bits (105), Expect = 3e-07
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 6 IHWAALSGREDVVDFLLKNKSPVDPKDDTNRTPLILAAAAGKLEIVRLLISNGADVNAKA 65
WA +G D V + V+ + R PL AA G+LEI+ L+ GAD+NA
Sbjct: 6 FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD 65
Query: 66 DGGHSALQYACSKGWKEIAELLIHNHANVNIQDVRGATPLHRAASQGITPVVKLLL 121
+ L A +G +LL+ A+ ++ G T L +Q +K LL
Sbjct: 66 KHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQ----AIKALL 117
Score = 27.2 bits (58), Expect = 0.81
Identities = 4/23 (17%), Positives = 8/23 (34%)
Query: 136 GNTPLHYACEEKRLTDAKLLVRC 158
+ +A + L + K V
Sbjct: 2 CDKEFMWALKNGDLDEVKDYVAK 24
>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine
synthase) {Salmonella typhimurium [TaxId: 90371]}
Length = 302
Score = 29.5 bits (65), Expect = 0.23
Identities = 6/29 (20%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Query: 130 NITDAYGNTPLHYACEEKRLTDAKLLVRC 158
+ + G+TPL R+ + ++L +
Sbjct: 6 DNSLTIGHTPLVRL---NRIGNGRILAKV 31
>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 355
Score = 27.5 bits (60), Expect = 1.0
Identities = 6/47 (12%), Positives = 13/47 (27%), Gaps = 3/47 (6%)
Query: 106 HRAASQGITPVVKLLLTQRLDIDVNITDAYGNTPLHYACEEKRLTDA 152
+P + I +I G+TP+ ++
Sbjct: 13 QLGRPASESPHHHTAPAKSPKILPDILKKIGDTPMVRI---NKIGKK 56
>d1tn3a_ d.169.1.1 (A:) Tetranectin {Human (Homo sapiens) [TaxId:
9606]}
Length = 137
Score = 27.0 bits (58), Expect = 1.0
Identities = 8/21 (38%), Positives = 9/21 (42%), Gaps = 6/21 (28%)
Query: 71 ALQYACSKGWKEIAELLIHNH 91
ALQ C KG K +H
Sbjct: 1 ALQTVCLKGTK------VHMK 15
>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine
synthase) {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 320
Score = 27.5 bits (60), Expect = 1.1
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 130 NITDAYGNTPLHYACEEKRLTDAKLLVRC 158
++T+ GNTPL Y ++ +
Sbjct: 6 DVTELIGNTPLVYLNNVAEGCVGRVAAKL 34
>d1d3ga_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 367
Score = 27.3 bits (59), Expect = 1.5
Identities = 14/58 (24%), Positives = 20/58 (34%), Gaps = 11/58 (18%)
Query: 55 ISNGADVNAKADGGHSALQ----------YACSKGWKEIAELLIHNHANVNIQDVRGA 102
+S+G D K G S +Q K +E+ LL + D GA
Sbjct: 307 VSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFG-GVTDAIGA 363
>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine
synthase) {Escherichia coli, isoform B (CysM) [TaxId:
562]}
Length = 292
Score = 26.1 bits (56), Expect = 2.9
Identities = 5/29 (17%), Positives = 11/29 (37%)
Query: 130 NITDAYGNTPLHYACEEKRLTDAKLLVRC 158
+ GNTPL +++ ++
Sbjct: 2 TLEQTIGNTPLVKLQRMGPDNGSEVWLKL 30
>d1ggpb1 b.42.2.1 (B:11-140) Plant cytotoxin B-chain (lectin)
{Mongolian snake-gourd (Trichosanthes kirilowii), Lectin
1 [TaxId: 3677]}
Length = 126
Score = 25.1 bits (54), Expect = 4.1
Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 51 VRLLISNG--ADVNAKADGGHSALQYACSKGWKEIAELLIH--NHANVNIQDVRGA 102
VR+ +G ADVN + G + + C++ ++ L +N A
Sbjct: 6 VRIAGRDGFCADVNGEGQNGAAIILKKCAENDNQLWTLKREATIRSNGGCLTTAAA 61
>d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine
synthase) {Thermus thermophilus [TaxId: 274]}
Length = 302
Score = 25.7 bits (55), Expect = 4.7
Identities = 6/28 (21%), Positives = 12/28 (42%)
Query: 131 ITDAYGNTPLHYACEEKRLTDAKLLVRC 158
+ A G TP+ + A++ V+
Sbjct: 3 VEGAIGKTPVVRLAKVVEPDMAEVWVKL 30
>d1s1ta1 c.55.3.1 (A:430-539) HIV RNase H (Domain of reverse
transcriptase) {Human immunodeficiency virus type 1
[TaxId: 11676]}
Length = 110
Score = 24.6 bits (53), Expect = 5.4
Identities = 7/26 (26%), Positives = 10/26 (38%), Gaps = 1/26 (3%)
Query: 76 CSKGWKEIAELLIHNHANVNIQDVRG 101
S+ +I E LI V + V
Sbjct: 85 ESELVNQIIEQLIKKE-KVYLAWVPA 109
>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine
synthase) {Haemophilus influenzae [TaxId: 727]}
Length = 310
Score = 25.3 bits (54), Expect = 6.1
Identities = 7/30 (23%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
Query: 130 NITDAYGNTPLHYACEEKRLT-DAKLLVRC 158
+ + + GNTPL K + ++V+
Sbjct: 5 DNSYSIGNTPLVRL---KHFGHNGNVVVKI 31
>d1tv5a1 c.1.4.1 (A:158-566) Dihydroorotate dehydrogenase
{Plasmodium falciparum [TaxId: 5833]}
Length = 409
Score = 25.3 bits (54), Expect = 6.6
Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 11/58 (18%)
Query: 55 ISNGADVNAKADGGHSALQ----------YACSKGWKEIAELLIHNHANVNIQDVRGA 102
I +G D K + G S Q + + +E+ LL N+++ G
Sbjct: 351 IFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYY-NLKEAIGR 407
>d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId:
69002]}
Length = 183
Score = 24.3 bits (52), Expect = 8.6
Identities = 2/23 (8%), Positives = 7/23 (30%)
Query: 43 AAAGKLEIVRLLISNGADVNAKA 65
++ G + S ++
Sbjct: 18 SSVGISSYLLYFKSFFKEIRVVM 40
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.136 0.397
Gapped
Lambda K H
0.267 0.0395 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 729,214
Number of extensions: 31642
Number of successful extensions: 378
Number of sequences better than 10.0: 1
Number of HSP's gapped: 211
Number of HSP's successfully gapped: 132
Length of query: 198
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 117
Effective length of database: 1,295,466
Effective search space: 151569522
Effective search space used: 151569522
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)