BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1401
(79 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P52819|RL22_CAEEL 60S ribosomal protein L22 OS=Caenorhabditis elegans GN=rpl-22 PE=1
SV=3
Length = 130
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 2 DMEKYLLERIKVGGKTSNFG-NAVSLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLR 60
D+E +L E+IKV GKT + N V +E K+KV + ++V FSKRYLKYLTKKYLK+N+LR
Sbjct: 40 DLEAFLNEKIKVNGKTGHLAANNVKVEVAKSKVSVVSEVPFSKRYLKYLTKKYLKRNSLR 99
Query: 61 DWLRVVANKKDSYELRYFQ 79
DWLRVVA K++YE+RYF
Sbjct: 100 DWLRVVAVNKNTYEVRYFH 118
>sp|Q09668|RL22_SCHPO 60S ribosomal protein L22 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl22 PE=1 SV=3
Length = 117
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Query: 3 MEKYLLERIKVGGKTSNFGNAVSLERQ-KTKVILTADVAFSKRYLKYLTKKYLKKNNLRD 61
EKYL++RIKV GKT N G++V + R+ +K+ + A + FS RYLKYLTKK+LKK++LRD
Sbjct: 30 FEKYLIDRIKVDGKTGNLGSSVVVSREGSSKIAVIAHIDFSGRYLKYLTKKFLKKHSLRD 89
Query: 62 WLRVVANKKDSYELRYFQ 79
WLRVV+ KK YELRY+
Sbjct: 90 WLRVVSTKKGVYELRYYN 107
>sp|Q54GK6|RL222_DICDI 60S ribosomal protein L22 2 OS=Dictyostelium discoideum GN=rpl22a
PE=3 SV=1
Length = 116
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 57/76 (75%)
Query: 3 MEKYLLERIKVGGKTSNFGNAVSLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLRDW 62
EKYL +RIKV K SN G+ V + + K+K+I+ + FSKRYLKYLTKK+LK +RD+
Sbjct: 32 FEKYLHDRIKVDNKVSNLGSNVVISKDKSKIIINTTIPFSKRYLKYLTKKFLKFKQIRDF 91
Query: 63 LRVVANKKDSYELRYF 78
LRVVA K++YELRYF
Sbjct: 92 LRVVATTKNTYELRYF 107
>sp|Q90YU6|RL22_ICTPU 60S ribosomal protein L22 OS=Ictalurus punctatus GN=rpl22 PE=2 SV=3
Length = 128
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 2 DMEKYLLERIKVGGKTSNFGNAV-SLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLR 60
+ E++L ERIKV GK N G V S+ER K+K+ +T+D+ FSKRYLKYLTKKYLKKNNLR
Sbjct: 38 NFEQFLQERIKVNGKAGNLGGGVVSIERSKSKITVTSDIPFSKRYLKYLTKKYLKKNNLR 97
Query: 61 DWLRVVANKKDSYELRYFQ 79
DWLRVVAN K+SYELRYFQ
Sbjct: 98 DWLRVVANTKESYELRYFQ 116
>sp|Q54JE3|RL221_DICDI 60S ribosomal protein L22 1 OS=Dictyostelium discoideum GN=rpl22
PE=3 SV=1
Length = 116
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 56/76 (73%)
Query: 3 MEKYLLERIKVGGKTSNFGNAVSLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLRDW 62
EKYL +RIKV K N G+ V + + K+K+I+ + FSKRYLKYLTKK+LK +RD+
Sbjct: 32 FEKYLHDRIKVDNKVGNLGSTVVISKDKSKIIINTTIPFSKRYLKYLTKKFLKFKQIRDF 91
Query: 63 LRVVANKKDSYELRYF 78
LRVVA K++YELRYF
Sbjct: 92 LRVVATTKNTYELRYF 107
>sp|P35268|RL22_HUMAN 60S ribosomal protein L22 OS=Homo sapiens GN=RPL22 PE=1 SV=2
Length = 128
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 2 DMEKYLLERIKVGGKTSNFGNAV-SLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLR 60
+ E++L ERIKV GK N G V ++ER K+K+ +T++V FSKRYLKYLTKKYLKKNNLR
Sbjct: 38 NFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLR 97
Query: 61 DWLRVVANKKDSYELRYFQ 79
DWLRVVAN K+SYELRYFQ
Sbjct: 98 DWLRVVANSKESYELRYFQ 116
>sp|P67985|RL22_PIG 60S ribosomal protein L22 OS=Sus scrofa GN=RPL22 PE=2 SV=2
Length = 128
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 2 DMEKYLLERIKVGGKTSNFGNAV-SLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLR 60
+ E++L ERIKV GK N G V ++ER K+K+ +T++V FSKRYLKYLTKKYLKKNNLR
Sbjct: 38 NFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLR 97
Query: 61 DWLRVVANKKDSYELRYFQ 79
DWLRVVAN K+SYELRYFQ
Sbjct: 98 DWLRVVANSKESYELRYFQ 116
>sp|P67984|RL22_MOUSE 60S ribosomal protein L22 OS=Mus musculus GN=Rpl22 PE=2 SV=2
Length = 128
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 2 DMEKYLLERIKVGGKTSNFGNAV-SLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLR 60
+ E++L ERIKV GK N G V ++ER K+K+ +T++V FSKRYLKYLTKKYLKKNNLR
Sbjct: 38 NFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLR 97
Query: 61 DWLRVVANKKDSYELRYFQ 79
DWLRVVAN K+SYELRYFQ
Sbjct: 98 DWLRVVANSKESYELRYFQ 116
>sp|Q4R5I3|RL22_MACFA 60S ribosomal protein L22 OS=Macaca fascicularis GN=RPL22 PE=2 SV=3
Length = 128
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 2 DMEKYLLERIKVGGKTSNFGNAV-SLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLR 60
+ E++L ERIKV GK N G V ++ER K+K+ +T++V FSKRYLKYLTKKYLKKNNLR
Sbjct: 38 NFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLR 97
Query: 61 DWLRVVANKKDSYELRYFQ 79
DWLRVVAN K+SYELRYFQ
Sbjct: 98 DWLRVVANSKESYELRYFQ 116
>sp|Q98TF8|RL22_CHICK 60S ribosomal protein L22 OS=Gallus gallus GN=RPL22 PE=2 SV=1
Length = 128
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 2 DMEKYLLERIKVGGKTSNFGNAV-SLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLR 60
+ E++L ERIKV GK N G V ++ER K+K+ +T++V FSKRYLKYLTKKYLKKNNLR
Sbjct: 38 NFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLR 97
Query: 61 DWLRVVANKKDSYELRYFQ 79
DWLRVVAN K+SYELRYFQ
Sbjct: 98 DWLRVVANSKESYELRYFQ 116
>sp|P52865|RL22_GADMO 60S ribosomal protein L22 (Fragment) OS=Gadus morhua GN=rpl22 PE=2
SV=2
Length = 125
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 2 DMEKYLLERIKVGGKTSNFGNAV-SLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLR 60
+ E++L ERIKV GK+ N GN V S+ER +K+ + ++V FSKRYLKYLTKKYLKKNNLR
Sbjct: 35 NFEQFLQERIKVNGKSGNLGNGVVSIERXXSKISVNSEVPFSKRYLKYLTKKYLKKNNLR 94
Query: 61 DWLRVVANKKDSYELRYFQ 79
DWLRVVAN K+SYELRYFQ
Sbjct: 95 DWLRVVANTKESYELRYFQ 113
>sp|P13732|RL22_TRIGR 60S ribosomal protein L22 OS=Tripneustes gratilla GN=RPL22 PE=2
SV=1
Length = 130
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 66/78 (84%)
Query: 2 DMEKYLLERIKVGGKTSNFGNAVSLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLRD 61
+ E++L ERIKV GKT N + +ER+K+KV +T+++AFSKRYLKYLTKKYLKKNNLRD
Sbjct: 42 NFEQFLQERIKVNGKTKNLTTNIVIERKKSKVTVTSEIAFSKRYLKYLTKKYLKKNNLRD 101
Query: 62 WLRVVANKKDSYELRYFQ 79
WLRVVA K+SYELRYFQ
Sbjct: 102 WLRVVAANKESYELRYFQ 119
>sp|P50887|RL22_DROME 60S ribosomal protein L22 OS=Drosophila melanogaster GN=RpL22 PE=1
SV=2
Length = 299
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 66/78 (84%)
Query: 2 DMEKYLLERIKVGGKTSNFGNAVSLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLRD 61
D EKY+ R+KV GK +N GN V+ ER K K+I+++DV FSK YLKYLTKKYLKKN+LRD
Sbjct: 210 DFEKYIKARLKVNGKVNNLGNNVTFERSKLKLIVSSDVHFSKAYLKYLTKKYLKKNSLRD 269
Query: 62 WLRVVANKKDSYELRYFQ 79
W+RVVAN+KDSYELRYF+
Sbjct: 270 WIRVVANEKDSYELRYFR 287
>sp|Q28IL6|RL22_XENTR 60S ribosomal protein L22 OS=Xenopus tropicalis GN=rpl22 PE=2 SV=3
Length = 128
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 2 DMEKYLLERIKVGGKTSNFGNAV-SLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLR 60
+ E++L +RIKV GK N G V S+ER K+K+ ++++V FSKRYLKYLTKKYLKKNNLR
Sbjct: 38 NFEQFLHDRIKVNGKVGNLGGGVVSIERSKSKITVSSEVPFSKRYLKYLTKKYLKKNNLR 97
Query: 61 DWLRVVANKKDSYELRYFQ 79
DWLRVVAN K+SYELRYFQ
Sbjct: 98 DWLRVVANSKESYELRYFQ 116
>sp|P50886|RL22_XENLA 60S ribosomal protein L22 OS=Xenopus laevis GN=rpl22 PE=2 SV=2
Length = 128
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 2 DMEKYLLERIKVGGKTSNFGNAV-SLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLR 60
+ E++L +RIKV GK N G V S+ER K+K+ ++++V FSKRYLKYLTKKYLKKNNLR
Sbjct: 38 NFEQFLHDRIKVNGKVGNLGGGVVSIERSKSKITVSSEVPFSKRYLKYLTKKYLKKNNLR 97
Query: 61 DWLRVVANKKDSYELRYFQ 79
DWLRVVAN K+SYELRYFQ
Sbjct: 98 DWLRVVANSKESYELRYFQ 116
>sp|P47198|RL22_RAT 60S ribosomal protein L22 OS=Rattus norvegicus GN=Rpl22 PE=2 SV=2
Length = 128
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Query: 2 DMEKYLLERIKVGGKTSNFGNAV-SLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLR 60
+ E++L ERIKV GK N G V ++ER K+K+ +T++ FSKRYLKYLTKKYLKKNNLR
Sbjct: 38 NFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEEPFSKRYLKYLTKKYLKKNNLR 97
Query: 61 DWLRVVANKKDSYELRYFQ 79
DWLRVVAN K+SYELRYFQ
Sbjct: 98 DWLRVVANSKESYELRYFQ 116
>sp|A4FUH0|RL22L_BOVIN 60S ribosomal protein L22-like 1 OS=Bos taurus GN=RPL22L1 PE=2 SV=1
Length = 122
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 65/78 (83%)
Query: 2 DMEKYLLERIKVGGKTSNFGNAVSLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLRD 61
+ E++L E++KV GKT N GN V +ER K K+I+ ++ FSKRYLKYLTKKYLKKNNLRD
Sbjct: 33 NFEQFLREKVKVNGKTGNLGNVVHIERFKNKIIVVSEKQFSKRYLKYLTKKYLKKNNLRD 92
Query: 62 WLRVVANKKDSYELRYFQ 79
WLRVVA+ K++YELRYFQ
Sbjct: 93 WLRVVASDKETYELRYFQ 110
>sp|Q9D7S7|RL22L_MOUSE 60S ribosomal protein L22-like 1 OS=Mus musculus GN=Rpl22l1 PE=1
SV=1
Length = 122
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 64/78 (82%)
Query: 2 DMEKYLLERIKVGGKTSNFGNAVSLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLRD 61
+ E++L E++KV GKT N GN V +ER K K+ + ++ FSKRYLKYLTKKYLKKNNLRD
Sbjct: 33 NFEQFLREKVKVNGKTGNLGNVVHIERLKNKITVVSEKQFSKRYLKYLTKKYLKKNNLRD 92
Query: 62 WLRVVANKKDSYELRYFQ 79
WLRVVA+ K++YELRYFQ
Sbjct: 93 WLRVVASDKETYELRYFQ 110
>sp|Q6P5R6|RL22L_HUMAN 60S ribosomal protein L22-like 1 OS=Homo sapiens GN=RPL22L1 PE=1
SV=2
Length = 122
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 64/78 (82%)
Query: 2 DMEKYLLERIKVGGKTSNFGNAVSLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLRD 61
+ E++L E++KV GKT N GN V +ER K K+ + ++ FSKRYLKYLTKKYLKKNNLRD
Sbjct: 33 NFEQFLREKVKVNGKTGNLGNVVHIERFKNKITVVSEKQFSKRYLKYLTKKYLKKNNLRD 92
Query: 62 WLRVVANKKDSYELRYFQ 79
WLRVVA+ K++YELRYFQ
Sbjct: 93 WLRVVASDKETYELRYFQ 110
>sp|Q5I0R6|RL22L_XENTR 60S ribosomal protein L22-like 1 OS=Xenopus tropicalis GN=rpl22l1
PE=2 SV=1
Length = 120
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 66/79 (83%)
Query: 1 MDMEKYLLERIKVGGKTSNFGNAVSLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLR 60
++ E++L ERIKV GKT N G+ V + R K+K+ ++++ FSKRYLKYLTKKYLKKNNLR
Sbjct: 31 VNFEQFLKERIKVNGKTGNLGSIVHIGRLKSKITVSSEKKFSKRYLKYLTKKYLKKNNLR 90
Query: 61 DWLRVVANKKDSYELRYFQ 79
DWLRVVA+ K++YELRYFQ
Sbjct: 91 DWLRVVASDKETYELRYFQ 109
>sp|Q9FE58|RL223_ARATH 60S ribosomal protein L22-3 OS=Arabidopsis thaliana GN=RPL22C PE=2
SV=1
Length = 124
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
Query: 3 MEKYLLERIKVGGKTSNFGNAVSLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLRDW 62
+EK+L ERIKVGGK G++VS+ R+K+K+ +TAD FSKRYLKYLTKKYLKK+N+RDW
Sbjct: 36 LEKFLQERIKVGGKAGALGDSVSITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDW 95
Query: 63 LRVVANKKDS--YELRYF 78
LRV+A KD YELRYF
Sbjct: 96 LRVIAANKDRNLYELRYF 113
>sp|Q9M9W1|RL222_ARATH 60S ribosomal protein L22-2 OS=Arabidopsis thaliana GN=RPL22B PE=2
SV=1
Length = 124
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
Query: 3 MEKYLLERIKVGGKTSNFGNAVSLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLRDW 62
+EK+L ERIKVGGK G++V++ R+K+K+ +TAD FSKRYLKYLTKKYLKK+N+RDW
Sbjct: 36 LEKFLQERIKVGGKAGALGDSVTITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDW 95
Query: 63 LRVVANKKDS--YELRYF 78
LRV+A KD YELRYF
Sbjct: 96 LRVIAANKDRNLYELRYF 113
>sp|Q9SRX7|RL221_ARATH Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana
GN=RPL22A PE=3 SV=1
Length = 127
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Query: 3 MEKYLLERIKVGGKTSNFGNAVSLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLRDW 62
+EK+L ERIKV GK GN+VS+ R K+ + A+ FSKRYLKYLTKKYLKK NLRDW
Sbjct: 38 LEKFLQERIKVRGKAGALGNSVSITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDW 97
Query: 63 LRVVANKKDS--YELRYFQ 79
LRV+A+ KD YE+RYF+
Sbjct: 98 LRVIASNKDKNVYEVRYFR 116
>sp|P05749|RL22A_YEAST 60S ribosomal protein L22-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL22A PE=1 SV=3
Length = 121
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%)
Query: 5 KYLLERIKVGGKTSNFGNAVSLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLRDWLR 64
KYL++ IKV G N GNAV++ T V + + FS +YLKYLTKKYLKKN LRDW+R
Sbjct: 35 KYLIDHIKVEGAVGNLGNAVTVTEDGTVVTVVSTAKFSGKYLKYLTKKYLKKNQLRDWIR 94
Query: 65 VVANKKDSYELRYFQ 79
V+ K + Y L ++Q
Sbjct: 95 FVSTKTNEYRLAFYQ 109
>sp|P56628|RL22B_YEAST 60S ribosomal protein L22-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL22B PE=1 SV=2
Length = 122
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%)
Query: 4 EKYLLERIKVGGKTSNFGNAVSLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLRDWL 63
KYL++ IKV G N GNA+ + + V + + FS +YLKYLTKKYLKKN LRDW+
Sbjct: 34 SKYLIDHIKVDGAVGNLGNAIEVTEDGSIVTVVSSAKFSGKYLKYLTKKYLKKNQLRDWI 93
Query: 64 RVVANKKDSYELRYFQ 79
R V+ +++ Y+L ++Q
Sbjct: 94 RFVSIRQNQYKLVFYQ 109
>sp|Q23BV5|RL22_TETTS 60S ribosomal protein L22 OS=Tetrahymena thermophila (strain SB210)
GN=RPL22 PE=1 SV=3
Length = 118
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 55/77 (71%)
Query: 2 DMEKYLLERIKVGGKTSNFGNAVSLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLRD 61
+ ++L +IKVGGK N G +++ K+ + + + FSKRYLKYLTKKYLKK +LR+
Sbjct: 34 EFAEFLKSKIKVGGKLGNLGENITISNDDKKINVQSTIPFSKRYLKYLTKKYLKKQDLRN 93
Query: 62 WLRVVANKKDSYELRYF 78
+L V ++ K+SY+LRYF
Sbjct: 94 YLYVTSSDKNSYQLRYF 110
>sp|Q9RL99|METK_RICTY S-adenosylmethionine synthase OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=metK PE=3 SV=2
Length = 382
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 9 ERIKVGGKTSNFGNAVSLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLRDWLRVVAN 68
E I G + FG A + +TK ++ A + ++ +K + YL+K N+ WLR +
Sbjct: 113 EEIGAGDQEMVFGYACN----ETKSLMPAPIYYAHLLMK--RQAYLRKQNILSWLR--PD 164
Query: 69 KKDSYELRY 77
K LRY
Sbjct: 165 AKSQVTLRY 173
>sp|P56878|METK_RICPR S-adenosylmethionine synthase OS=Rickettsia prowazekii (strain
Madrid E) GN=metK PE=3 SV=1
Length = 380
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 9 ERIKVGGKTSNFGNAVSLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLRDWLRVVAN 68
E I G + FG A + +TK ++ A + ++ +K + YL+K N+ WLR +
Sbjct: 113 EEIGAGDQGMVFGYACN----ETKSLMPAPIYYAHLLMK--RQAYLRKQNILSWLR--PD 164
Query: 69 KKDSYELRY 77
K LRY
Sbjct: 165 AKSQVTLRY 173
>sp|Q2SLT3|METK_HAHCH S-adenosylmethionine synthase OS=Hahella chejuensis (strain KCTC
2396) GN=metK PE=3 SV=1
Length = 386
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 20 FGNAVSLERQKTKVILTADVAFSKRYLKYLTKKYLKKNNLRDWLRVVANKKDSYELRY 77
FG A + +T V++ A + +S R ++ + YL+KN++ WLR + K LRY
Sbjct: 125 FGYATN----ETDVLMPAPIYYSHRLVE--RQAYLRKNSILPWLR--PDAKSQVTLRY 174
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,146,185
Number of Sequences: 539616
Number of extensions: 867724
Number of successful extensions: 2606
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2563
Number of HSP's gapped (non-prelim): 35
length of query: 79
length of database: 191,569,459
effective HSP length: 50
effective length of query: 29
effective length of database: 164,588,659
effective search space: 4773071111
effective search space used: 4773071111
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)