Query psy14014
Match_columns 615
No_of_seqs 221 out of 2236
Neff 10.9
Searched_HMMs 46136
Date Fri Aug 16 17:21:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14014.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14014hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0211|consensus 100.0 1.4E-51 2.9E-56 421.2 45.5 587 5-614 74-665 (759)
2 KOG0211|consensus 100.0 2E-31 4.3E-36 273.6 38.6 533 15-575 123-665 (759)
3 KOG2023|consensus 100.0 1.2E-30 2.7E-35 251.8 39.7 600 6-612 6-774 (885)
4 KOG2171|consensus 100.0 3.5E-27 7.7E-32 243.8 55.0 596 17-613 83-914 (1075)
5 KOG2171|consensus 100.0 6.7E-27 1.5E-31 241.7 52.3 552 13-597 4-620 (1075)
6 KOG0213|consensus 100.0 7.2E-26 1.6E-30 221.3 43.8 560 15-613 478-1107(1172)
7 KOG2023|consensus 100.0 4.6E-26 1E-30 220.4 36.7 589 17-609 94-813 (885)
8 KOG0213|consensus 100.0 1.3E-25 2.7E-30 219.6 38.8 557 13-612 363-1064(1172)
9 KOG1241|consensus 99.9 3.7E-23 8E-28 203.9 44.1 578 18-598 95-794 (859)
10 KOG1241|consensus 99.9 4.1E-23 8.9E-28 203.6 42.0 550 49-614 87-712 (859)
11 COG5181 HSH155 U2 snRNP splice 99.9 8.6E-23 1.9E-27 196.2 38.8 550 17-613 285-912 (975)
12 KOG1824|consensus 99.9 3.8E-22 8.1E-27 200.6 41.5 572 17-612 9-721 (1233)
13 COG5181 HSH155 U2 snRNP splice 99.9 6.5E-22 1.4E-26 190.2 34.0 559 14-611 169-868 (975)
14 PLN03200 cellulose synthase-in 99.9 2.5E-19 5.5E-24 200.6 49.1 575 10-613 10-723 (2102)
15 PLN03200 cellulose synthase-in 99.9 1.2E-19 2.6E-24 203.2 45.5 566 14-613 190-811 (2102)
16 PF01602 Adaptin_N: Adaptin N 99.9 1.1E-18 2.4E-23 184.4 43.0 510 15-614 9-525 (526)
17 KOG1824|consensus 99.9 4E-18 8.7E-23 172.0 43.2 543 61-614 14-639 (1233)
18 COG5215 KAP95 Karyopherin (imp 99.9 2.4E-17 5.2E-22 157.9 46.2 574 19-598 100-792 (858)
19 KOG1242|consensus 99.9 1.3E-17 2.9E-22 163.3 38.3 521 54-607 19-558 (569)
20 KOG1242|consensus 99.9 5.4E-18 1.2E-22 166.0 35.4 517 23-569 27-559 (569)
21 COG5215 KAP95 Karyopherin (imp 99.8 3.5E-15 7.5E-20 143.3 43.9 549 49-614 91-712 (858)
22 KOG0915|consensus 99.8 1.3E-16 2.9E-21 168.9 36.4 548 55-613 821-1427(1702)
23 PRK13800 putative oxidoreducta 99.8 5.6E-18 1.2E-22 186.3 25.9 275 246-610 622-896 (897)
24 PRK09687 putative lyase; Provi 99.8 9.2E-18 2E-22 157.5 22.2 253 286-610 25-279 (280)
25 PRK13800 putative oxidoreducta 99.8 1.6E-17 3.6E-22 182.6 27.0 275 207-571 622-896 (897)
26 PTZ00429 beta-adaptin; Provisi 99.8 3.3E-14 7.2E-19 149.3 49.3 504 14-610 33-543 (746)
27 PRK09687 putative lyase; Provi 99.8 2.6E-17 5.6E-22 154.5 22.9 220 133-392 58-279 (280)
28 PF01602 Adaptin_N: Adaptin N 99.8 4.9E-16 1.1E-20 164.2 35.0 470 14-533 43-522 (526)
29 KOG0212|consensus 99.8 6.1E-16 1.3E-20 148.4 28.5 401 172-593 5-425 (675)
30 KOG0915|consensus 99.7 4.9E-13 1.1E-17 142.5 42.8 523 6-537 810-1471(1702)
31 KOG0212|consensus 99.7 1.4E-13 3E-18 132.5 33.7 450 99-572 9-478 (675)
32 KOG1240|consensus 99.7 2.6E-15 5.7E-20 155.8 20.5 273 179-477 435-745 (1431)
33 PTZ00429 beta-adaptin; Provisi 99.7 4.4E-12 9.5E-17 133.5 44.0 218 167-395 68-285 (746)
34 KOG0166|consensus 99.7 1.7E-13 3.6E-18 134.2 29.8 382 209-611 69-484 (514)
35 KOG1240|consensus 99.6 1.9E-14 4.1E-19 149.6 17.2 298 67-376 439-745 (1431)
36 KOG0166|consensus 99.6 3.9E-12 8.4E-17 124.7 31.2 381 170-573 69-485 (514)
37 KOG4224|consensus 99.5 5.3E-12 1.1E-16 115.3 19.6 344 170-535 88-446 (550)
38 KOG1943|consensus 99.5 3.4E-08 7.5E-13 103.3 49.1 429 164-611 338-835 (1133)
39 KOG1060|consensus 99.5 7.9E-10 1.7E-14 111.1 34.5 261 328-606 288-564 (968)
40 PF10508 Proteasom_PSMB: Prote 99.4 1.2E-09 2.7E-14 112.4 36.5 379 211-612 43-461 (503)
41 COG5064 SRP1 Karyopherin (impo 99.4 1.5E-10 3.2E-15 105.1 20.9 346 245-611 114-494 (526)
42 KOG1943|consensus 99.4 1.2E-08 2.6E-13 106.6 36.4 497 15-575 343-882 (1133)
43 PF10508 Proteasom_PSMB: Prote 99.3 1.2E-08 2.5E-13 105.3 36.2 380 108-497 56-463 (503)
44 KOG4224|consensus 99.3 1.1E-10 2.4E-15 106.9 17.8 346 246-613 86-446 (550)
45 KOG1060|consensus 99.3 5.3E-08 1.1E-12 98.3 36.9 483 15-565 40-562 (968)
46 KOG1061|consensus 99.3 1.9E-08 4.1E-13 102.0 31.3 513 1-606 1-521 (734)
47 COG5064 SRP1 Karyopherin (impo 99.3 1.1E-09 2.4E-14 99.5 19.9 350 203-573 111-495 (526)
48 KOG2259|consensus 99.2 1.5E-08 3.3E-13 100.2 27.2 134 433-577 378-514 (823)
49 KOG1062|consensus 99.2 1.8E-07 3.9E-12 95.0 34.9 399 146-607 121-575 (866)
50 COG1413 FOG: HEAT repeat [Ener 99.2 9E-09 1.9E-13 101.8 25.9 184 168-393 44-240 (335)
51 KOG1020|consensus 99.2 4E-06 8.8E-11 91.1 44.4 500 92-613 818-1405(1692)
52 KOG1061|consensus 99.2 1.3E-08 2.8E-13 103.2 24.5 368 6-390 79-484 (734)
53 COG1413 FOG: HEAT repeat [Ener 99.2 2E-08 4.3E-13 99.3 25.8 277 246-611 44-333 (335)
54 COG5240 SEC21 Vesicle coat com 99.2 8.6E-07 1.9E-11 86.6 35.3 293 242-573 261-554 (898)
55 COG5240 SEC21 Vesicle coat com 99.2 8.4E-07 1.8E-11 86.7 35.2 279 323-613 260-555 (898)
56 KOG1991|consensus 99.2 1.2E-05 2.7E-10 84.1 45.7 512 52-611 5-619 (1010)
57 PF12348 CLASP_N: CLASP N term 99.1 2.4E-09 5.2E-14 99.4 17.6 192 368-578 9-210 (228)
58 KOG1059|consensus 99.1 1.6E-06 3.4E-11 87.2 35.9 219 161-394 138-364 (877)
59 TIGR02270 conserved hypothetic 99.1 1.9E-08 4.1E-13 99.3 22.6 144 433-612 152-295 (410)
60 KOG1243|consensus 99.1 7.2E-10 1.6E-14 111.0 12.1 272 4-316 245-518 (690)
61 PF12348 CLASP_N: CLASP N term 99.1 1.4E-08 2.9E-13 94.4 19.3 197 89-318 6-211 (228)
62 KOG1020|consensus 99.1 2.3E-05 5.1E-10 85.5 45.0 562 12-612 814-1495(1692)
63 KOG1062|consensus 99.1 4.3E-06 9.4E-11 85.3 36.8 401 169-612 109-543 (866)
64 KOG1991|consensus 99.1 3E-05 6.5E-10 81.3 43.4 431 14-499 5-535 (1010)
65 KOG1248|consensus 99.0 6.3E-05 1.4E-09 80.6 48.2 569 17-612 228-897 (1176)
66 KOG2259|consensus 99.0 4.8E-08 1.1E-12 96.7 21.0 216 165-392 196-472 (823)
67 TIGR02270 conserved hypothetic 99.0 7.2E-08 1.6E-12 95.3 22.6 150 205-391 53-203 (410)
68 KOG1248|consensus 99.0 2.5E-05 5.5E-10 83.5 42.0 484 32-542 369-905 (1176)
69 KOG4535|consensus 99.0 5.1E-07 1.1E-11 86.3 25.5 294 260-573 270-602 (728)
70 COG5096 Vesicle coat complex, 98.9 4.1E-05 9E-10 79.9 39.5 142 166-314 54-196 (757)
71 KOG1243|consensus 98.9 2.3E-08 5E-13 100.5 14.3 184 431-614 333-516 (690)
72 KOG1059|consensus 98.9 0.00017 3.6E-09 73.1 40.4 218 125-355 140-364 (877)
73 KOG2274|consensus 98.8 0.00019 4.1E-09 74.7 37.9 171 441-612 423-601 (1005)
74 PF05804 KAP: Kinesin-associat 98.8 0.00012 2.5E-09 77.3 37.5 372 208-613 252-649 (708)
75 KOG1058|consensus 98.8 3.9E-05 8.5E-10 77.9 31.5 328 161-536 128-464 (948)
76 KOG1992|consensus 98.8 0.00042 9.1E-09 71.5 40.6 274 296-599 472-779 (960)
77 KOG1078|consensus 98.8 0.00014 3.1E-09 74.4 35.0 481 32-573 39-531 (865)
78 KOG1820|consensus 98.7 2.5E-06 5.4E-11 90.4 23.5 345 206-581 63-450 (815)
79 KOG1078|consensus 98.7 9E-05 2E-09 75.8 31.4 428 160-612 57-531 (865)
80 KOG2062|consensus 98.7 2.6E-05 5.7E-10 78.9 26.5 156 431-600 522-681 (929)
81 KOG0413|consensus 98.7 0.00052 1.1E-08 71.8 36.0 475 130-613 473-1073(1529)
82 PF12460 MMS19_C: RNAPII trans 98.6 4.9E-05 1.1E-09 77.0 28.6 334 18-357 4-395 (415)
83 KOG1058|consensus 98.6 0.00041 9E-09 70.8 33.7 315 212-576 105-427 (948)
84 KOG1077|consensus 98.6 0.00094 2E-08 67.7 37.3 75 324-398 326-401 (938)
85 COG5096 Vesicle coat complex, 98.6 0.0013 2.8E-08 69.2 39.6 166 22-196 28-195 (757)
86 PF12755 Vac14_Fab1_bd: Vacuol 98.6 4.1E-07 9E-12 69.8 9.8 89 483-572 2-94 (97)
87 PF12460 MMS19_C: RNAPII trans 98.6 0.00045 9.7E-09 70.1 33.7 198 367-592 190-411 (415)
88 PF12755 Vac14_Fab1_bd: Vacuol 98.6 9.5E-07 2.1E-11 67.8 10.4 88 522-609 2-93 (97)
89 KOG4535|consensus 98.5 7.5E-05 1.6E-09 72.0 24.2 461 101-611 7-601 (728)
90 PF13646 HEAT_2: HEAT repeats; 98.5 7.4E-07 1.6E-11 68.6 8.7 85 248-352 2-88 (88)
91 KOG1820|consensus 98.5 6.1E-05 1.3E-09 80.2 25.1 193 283-503 252-450 (815)
92 KOG2137|consensus 98.5 2.8E-05 6.2E-10 79.2 21.2 240 339-604 285-528 (700)
93 PF12717 Cnd1: non-SMC mitotic 98.5 1.2E-05 2.6E-10 70.8 16.5 166 441-609 1-175 (178)
94 PF05804 KAP: Kinesin-associat 98.4 0.00041 8.9E-09 73.3 29.7 371 173-575 256-650 (708)
95 KOG1293|consensus 98.4 0.0016 3.5E-08 65.8 31.7 135 440-574 389-533 (678)
96 KOG1293|consensus 98.4 0.0019 4.1E-08 65.3 31.8 419 177-611 63-531 (678)
97 PF13646 HEAT_2: HEAT repeats; 98.4 2.1E-06 4.6E-11 66.0 9.3 86 286-391 1-88 (88)
98 KOG0414|consensus 98.4 0.0062 1.3E-07 65.9 43.8 159 448-612 897-1063(1251)
99 KOG2274|consensus 98.4 0.005 1.1E-07 64.6 43.1 175 437-614 500-690 (1005)
100 KOG0567|consensus 98.4 4.9E-05 1.1E-09 67.7 17.2 233 286-572 38-278 (289)
101 KOG0168|consensus 98.3 0.0013 2.9E-08 68.2 29.5 154 165-318 209-369 (1051)
102 KOG1992|consensus 98.3 0.0059 1.3E-07 63.4 38.6 172 439-611 417-621 (960)
103 cd00020 ARM Armadillo/beta-cat 98.3 3.2E-06 6.9E-11 69.5 9.2 108 466-573 6-119 (120)
104 PF12717 Cnd1: non-SMC mitotic 98.3 8.5E-05 1.9E-09 65.4 18.3 108 180-290 1-108 (178)
105 KOG2062|consensus 98.3 8E-05 1.7E-09 75.6 19.0 263 53-344 414-682 (929)
106 KOG2032|consensus 98.3 0.0054 1.2E-07 60.1 30.6 260 324-611 255-529 (533)
107 cd00020 ARM Armadillo/beta-cat 98.3 5.9E-06 1.3E-10 67.9 9.2 109 505-613 6-120 (120)
108 PF04826 Arm_2: Armadillo-like 98.3 8.9E-05 1.9E-09 68.5 17.6 188 171-360 16-209 (254)
109 KOG2032|consensus 98.3 0.00011 2.5E-09 71.2 18.7 251 61-355 267-530 (533)
110 PF04826 Arm_2: Armadillo-like 98.2 9.4E-05 2E-09 68.3 16.5 216 367-603 13-252 (254)
111 KOG0567|consensus 98.2 0.00074 1.6E-08 60.5 20.9 188 170-393 70-278 (289)
112 KOG1077|consensus 98.2 0.011 2.4E-07 60.4 37.7 293 15-315 113-435 (938)
113 KOG4653|consensus 98.2 0.00032 6.9E-09 72.7 20.9 212 96-313 733-964 (982)
114 KOG4413|consensus 98.2 0.0059 1.3E-07 56.4 28.5 282 110-394 63-376 (524)
115 KOG2956|consensus 98.2 0.00027 5.8E-09 68.3 18.8 194 130-335 288-491 (516)
116 KOG0413|consensus 98.1 0.018 3.9E-07 60.9 36.8 172 439-613 980-1182(1529)
117 KOG2137|consensus 98.1 0.00026 5.7E-09 72.4 19.1 236 296-561 285-524 (700)
118 KOG1967|consensus 98.1 0.02 4.3E-07 60.5 37.0 149 422-572 863-1022(1030)
119 KOG0168|consensus 98.1 0.012 2.5E-07 61.5 30.0 154 204-359 209-367 (1051)
120 KOG2025|consensus 98.1 0.0013 2.8E-08 66.9 22.7 206 163-392 81-291 (892)
121 KOG4413|consensus 98.1 0.0031 6.8E-08 58.2 22.9 322 225-575 62-440 (524)
122 KOG2956|consensus 98.1 0.00064 1.4E-08 65.8 19.1 191 166-362 286-483 (516)
123 KOG4653|consensus 98.0 0.0011 2.5E-08 68.8 21.5 221 167-393 727-962 (982)
124 PF05918 API5: Apoptosis inhib 98.0 0.0086 1.9E-07 61.2 27.3 285 180-497 35-346 (556)
125 KOG2025|consensus 98.0 0.0011 2.3E-08 67.5 20.3 99 302-400 60-160 (892)
126 PF05004 IFRD: Interferon-rela 97.9 0.0022 4.7E-08 61.7 21.0 188 170-358 46-259 (309)
127 PF05004 IFRD: Interferon-rela 97.9 0.0024 5.2E-08 61.4 20.9 183 432-614 47-258 (309)
128 PF05918 API5: Apoptosis inhib 97.9 0.013 2.9E-07 59.8 26.7 260 103-375 35-315 (556)
129 PF13513 HEAT_EZ: HEAT-like re 97.9 1.5E-05 3.3E-10 54.6 3.8 53 520-572 1-55 (55)
130 PF13001 Ecm29: Proteasome sta 97.9 0.017 3.7E-07 60.0 27.3 216 336-577 246-491 (501)
131 PF13513 HEAT_EZ: HEAT-like re 97.9 4.4E-05 9.6E-10 52.3 5.8 53 341-393 1-55 (55)
132 PF02985 HEAT: HEAT repeat; I 97.7 8.5E-05 1.8E-09 43.6 4.1 28 247-274 2-29 (31)
133 PF13001 Ecm29: Proteasome sta 97.6 0.019 4.1E-07 59.7 23.6 164 440-607 295-482 (501)
134 COG5218 YCG1 Chromosome conden 97.6 0.089 1.9E-06 52.9 32.6 159 215-391 100-262 (885)
135 PF02985 HEAT: HEAT repeat; I 97.6 9.7E-05 2.1E-09 43.3 3.6 28 508-535 2-29 (31)
136 PLN03076 ARF guanine nucleotid 97.6 0.14 3.1E-06 60.3 31.1 278 129-406 1137-1504(1780)
137 KOG1517|consensus 97.5 0.0024 5.1E-08 67.9 14.7 212 145-356 486-732 (1387)
138 COG5116 RPN2 26S proteasome re 97.5 0.0058 1.3E-07 60.7 16.5 273 15-317 372-654 (926)
139 KOG1525|consensus 97.5 0.023 5.1E-07 63.9 22.9 334 11-356 45-405 (1266)
140 KOG1949|consensus 97.5 0.13 2.9E-06 52.8 25.3 144 245-393 174-329 (1005)
141 PLN03076 ARF guanine nucleotid 97.4 0.37 8E-06 57.1 32.1 314 184-501 1109-1494(1780)
142 PF14500 MMS19_N: Dos2-interac 97.4 0.084 1.8E-06 49.4 22.4 233 332-592 4-255 (262)
143 KOG1525|consensus 97.4 0.084 1.8E-06 59.6 25.7 315 70-395 28-405 (1266)
144 KOG1967|consensus 97.4 0.0054 1.2E-07 64.5 15.3 148 240-389 862-1018(1030)
145 KOG1949|consensus 97.4 0.011 2.4E-07 60.3 16.6 145 130-274 175-331 (1005)
146 COG5116 RPN2 26S proteasome re 97.3 0.0011 2.4E-08 65.6 9.2 147 431-592 519-667 (926)
147 KOG0414|consensus 97.3 0.39 8.4E-06 52.8 33.7 161 347-536 897-1065(1251)
148 PF01347 Vitellogenin_N: Lipop 97.3 0.053 1.1E-06 58.7 22.7 153 440-609 447-618 (618)
149 KOG1517|consensus 97.3 0.02 4.2E-07 61.3 17.8 134 443-576 572-734 (1387)
150 PF14500 MMS19_N: Dos2-interac 97.2 0.19 4.1E-06 47.1 23.4 235 289-549 4-251 (262)
151 smart00638 LPD_N Lipoprotein N 97.1 0.084 1.8E-06 56.5 21.9 151 441-608 410-573 (574)
152 PF12530 DUF3730: Protein of u 97.1 0.12 2.5E-06 47.8 19.9 56 178-235 95-151 (234)
153 PF08506 Cse1: Cse1; InterPro 97.1 0.088 1.9E-06 52.0 19.4 127 480-608 224-370 (370)
154 COG5218 YCG1 Chromosome conden 97.0 0.44 9.6E-06 48.2 33.8 96 15-112 93-192 (885)
155 KOG1993|consensus 97.0 0.58 1.3E-05 49.2 35.5 234 261-521 413-670 (978)
156 KOG2973|consensus 97.0 0.28 6.1E-06 45.5 20.4 255 331-612 7-314 (353)
157 KOG1822|consensus 97.0 1.2 2.5E-05 51.8 29.1 172 148-319 803-994 (2067)
158 KOG2933|consensus 96.9 0.031 6.7E-07 51.7 13.9 138 432-573 133-276 (334)
159 PF12719 Cnd3: Nuclear condens 96.9 0.29 6.2E-06 47.3 21.2 170 334-517 34-208 (298)
160 COG5234 CIN1 Beta-tubulin fold 96.9 0.45 9.7E-06 49.2 22.3 67 502-573 687-757 (993)
161 KOG1993|consensus 96.8 0.61 1.3E-05 49.0 23.3 267 51-354 487-767 (978)
162 KOG0392|consensus 96.8 0.078 1.7E-06 58.2 17.5 228 248-498 80-327 (1549)
163 PF01347 Vitellogenin_N: Lipop 96.8 0.11 2.5E-06 56.2 19.3 184 179-390 376-584 (618)
164 PF12719 Cnd3: Nuclear condens 96.7 0.18 3.8E-06 48.8 18.5 139 171-313 31-185 (298)
165 PF08506 Cse1: Cse1; InterPro 96.7 0.39 8.4E-06 47.6 20.9 127 260-389 226-369 (370)
166 KOG2933|consensus 96.7 0.056 1.2E-06 50.0 13.3 171 432-607 92-271 (334)
167 PF13251 DUF4042: Domain of un 96.6 0.036 7.9E-07 48.2 11.5 62 295-356 113-174 (182)
168 COG5656 SXM1 Importin, protein 96.5 1.3 2.9E-05 46.4 37.8 141 466-606 407-564 (970)
169 cd00256 VATPase_H VATPase_H, r 96.5 1.1 2.3E-05 45.0 27.6 146 210-357 105-259 (429)
170 cd00256 VATPase_H VATPase_H, r 96.4 1.2 2.6E-05 44.7 25.4 294 253-574 109-425 (429)
171 smart00638 LPD_N Lipoprotein N 96.3 0.25 5.3E-06 53.0 18.3 184 181-391 340-541 (574)
172 KOG0392|consensus 96.3 0.15 3.2E-06 56.2 15.8 225 90-315 77-327 (1549)
173 KOG1822|consensus 96.3 3.3 7.1E-05 48.4 28.0 121 239-360 870-992 (2067)
174 PF10363 DUF2435: Protein of u 96.3 0.053 1.1E-06 41.3 9.2 79 172-255 8-87 (92)
175 PF14664 RICTOR_N: Rapamycin-i 96.2 0.98 2.1E-05 44.8 20.3 175 180-354 81-267 (371)
176 PF10363 DUF2435: Protein of u 96.2 0.067 1.5E-06 40.7 9.6 69 509-577 6-75 (92)
177 PF12530 DUF3730: Protein of u 96.1 1.1 2.5E-05 41.3 21.9 194 175-379 9-216 (234)
178 PF11864 DUF3384: Domain of un 96.1 2.1 4.6E-05 44.2 30.8 276 27-312 4-329 (464)
179 KOG0891|consensus 96.0 6 0.00013 48.5 34.5 510 63-590 493-1055(2341)
180 PF13251 DUF4042: Domain of un 96.0 0.13 2.9E-06 44.7 11.3 60 554-613 111-174 (182)
181 KOG2213|consensus 95.9 1.8 3.8E-05 41.8 19.1 53 260-314 39-91 (460)
182 KOG2160|consensus 95.9 0.53 1.1E-05 45.0 15.8 169 440-608 95-277 (342)
183 PF11865 DUF3385: Domain of un 95.8 0.092 2E-06 45.0 9.6 141 243-395 8-157 (160)
184 COG5098 Chromosome condensatio 95.7 0.66 1.4E-05 48.0 16.5 142 465-612 890-1036(1128)
185 PF10274 ParcG: Parkin co-regu 95.7 0.24 5.1E-06 42.9 11.6 93 281-374 35-132 (183)
186 PF14664 RICTOR_N: Rapamycin-i 95.7 1.7 3.7E-05 43.2 19.3 226 88-313 23-269 (371)
187 PF11865 DUF3385: Domain of un 95.7 0.086 1.9E-06 45.2 9.1 72 283-356 85-157 (160)
188 KOG2160|consensus 95.7 1.6 3.4E-05 41.9 17.8 143 173-315 130-284 (342)
189 PF10274 ParcG: Parkin co-regu 95.6 0.27 5.8E-06 42.5 11.6 69 465-533 36-107 (183)
190 KOG2021|consensus 95.6 3.9 8.4E-05 43.2 38.9 239 337-598 450-749 (980)
191 COG5098 Chromosome condensatio 95.5 3.7 8E-05 42.9 43.1 146 441-594 909-1055(1128)
192 PF03378 CAS_CSE1: CAS/CSE pro 95.5 1.7 3.8E-05 44.1 18.8 188 167-360 71-276 (435)
193 cd08050 TAF6 TATA Binding Prot 95.4 0.45 9.7E-06 46.7 14.1 72 463-534 254-339 (343)
194 KOG0946|consensus 95.4 4.5 9.8E-05 42.9 33.1 321 178-534 34-398 (970)
195 KOG2011|consensus 95.3 3.6 7.7E-05 45.7 21.1 96 291-390 294-394 (1048)
196 PF08167 RIX1: rRNA processing 95.2 0.65 1.4E-05 40.2 13.0 126 465-592 23-163 (165)
197 KOG2011|consensus 95.1 5.7 0.00012 44.2 22.0 128 437-569 296-430 (1048)
198 PF07571 DUF1546: Protein of u 95.0 0.077 1.7E-06 40.5 6.0 69 478-550 17-89 (92)
199 KOG0889|consensus 95.0 4.1 9E-05 50.7 22.2 300 206-515 984-1328(3550)
200 PF08713 DNA_alkylation: DNA a 95.0 0.92 2E-05 41.3 14.3 130 132-275 54-185 (213)
201 PF03378 CAS_CSE1: CAS/CSE pro 94.9 4.6 0.0001 41.1 19.9 212 64-277 42-275 (435)
202 PF04118 Dopey_N: Dopey, N-ter 94.9 3.8 8.3E-05 39.3 20.5 182 367-574 55-254 (307)
203 PF12074 DUF3554: Domain of un 94.9 3.8 8.3E-05 40.5 19.2 58 177-235 33-90 (339)
204 PF12074 DUF3554: Domain of un 94.8 0.88 1.9E-05 44.9 14.5 87 29-119 3-90 (339)
205 PF12054 DUF3535: Domain of un 94.7 5.6 0.00012 40.7 20.0 75 181-255 101-178 (441)
206 cd08050 TAF6 TATA Binding Prot 94.6 1 2.2E-05 44.2 14.2 137 169-312 180-339 (343)
207 cd03568 VHS_STAM VHS domain fa 94.5 1.1 2.5E-05 37.5 12.2 102 254-361 13-115 (144)
208 PF08713 DNA_alkylation: DNA a 94.3 3.6 7.8E-05 37.4 16.5 134 205-357 50-185 (213)
209 PF12231 Rif1_N: Rap1-interact 94.3 6.4 0.00014 39.4 27.8 192 180-393 147-350 (372)
210 PF08161 NUC173: NUC173 domain 94.3 1.3 2.9E-05 39.4 12.7 162 446-611 18-197 (198)
211 KOG2022|consensus 94.3 9.6 0.00021 41.2 33.8 186 145-334 440-640 (982)
212 PF11864 DUF3384: Domain of un 94.1 8.2 0.00018 40.0 32.5 150 284-461 176-335 (464)
213 KOG2549|consensus 94.1 2 4.3E-05 43.5 14.7 59 477-535 308-370 (576)
214 PF04118 Dopey_N: Dopey, N-ter 94.1 5.7 0.00012 38.1 20.2 124 104-232 69-198 (307)
215 KOG1222|consensus 94.0 7.4 0.00016 38.9 27.1 119 221-341 278-400 (791)
216 PF08389 Xpo1: Exportin 1-like 93.9 1.3 2.8E-05 37.5 11.9 142 181-351 2-148 (148)
217 cd03569 VHS_Hrs_Vps27p VHS dom 93.8 2.2 4.9E-05 35.7 12.6 102 254-361 17-119 (142)
218 PF12054 DUF3535: Domain of un 93.7 9.1 0.0002 39.1 19.8 74 104-177 101-178 (441)
219 KOG0946|consensus 93.7 11 0.00025 40.2 34.9 213 4-236 13-242 (970)
220 PF03224 V-ATPase_H_N: V-ATPas 93.5 7.9 0.00017 37.7 19.5 147 249-397 109-271 (312)
221 KOG2213|consensus 93.3 8.5 0.00018 37.4 22.6 68 182-255 39-106 (460)
222 KOG2081|consensus 93.3 11 0.00024 38.6 37.1 146 441-592 365-515 (559)
223 PF11701 UNC45-central: Myosin 93.1 0.44 9.5E-06 40.8 7.5 130 101-231 16-155 (157)
224 KOG2149|consensus 93.1 1.6 3.5E-05 42.5 11.8 108 472-579 63-175 (393)
225 PF08623 TIP120: TATA-binding 93.0 0.74 1.6E-05 39.4 8.4 75 478-553 38-114 (169)
226 PF10521 DUF2454: Protein of u 92.9 2.7 5.8E-05 40.2 13.2 135 203-339 116-277 (282)
227 PF14868 DUF4487: Domain of un 92.8 14 0.00031 38.7 22.7 74 284-357 479-553 (559)
228 PF12830 Nipped-B_C: Sister ch 92.6 4.4 9.6E-05 35.9 13.4 72 165-238 6-77 (187)
229 KOG0803|consensus 92.6 23 0.0005 41.1 21.5 93 219-311 54-151 (1312)
230 PF01603 B56: Protein phosphat 92.6 13 0.00028 37.7 21.4 226 165-395 131-370 (409)
231 PF08064 UME: UME (NUC010) dom 92.5 1.6 3.4E-05 34.5 9.3 70 518-589 27-98 (107)
232 cd03561 VHS VHS domain family; 92.5 3.4 7.3E-05 34.2 11.8 101 254-360 13-116 (133)
233 PF08167 RIX1: rRNA processing 92.5 0.8 1.7E-05 39.6 8.3 107 15-123 27-147 (165)
234 PF10521 DUF2454: Protein of u 92.5 4.3 9.3E-05 38.8 14.0 138 241-378 115-277 (282)
235 KOG2759|consensus 92.4 12 0.00026 36.9 27.8 69 506-574 366-438 (442)
236 KOG2149|consensus 92.4 2.9 6.4E-05 40.7 12.5 108 173-280 64-176 (393)
237 PF11698 V-ATPase_H_C: V-ATPas 92.4 0.57 1.2E-05 37.3 6.5 68 507-574 44-115 (119)
238 KOG2549|consensus 92.1 3.5 7.6E-05 41.9 13.0 139 168-313 208-370 (576)
239 KOG2021|consensus 92.1 19 0.0004 38.4 41.7 114 438-554 450-585 (980)
240 PF12830 Nipped-B_C: Sister ch 91.9 8.7 0.00019 34.1 14.7 71 466-538 7-77 (187)
241 KOG1848|consensus 91.7 16 0.00034 41.8 18.3 217 98-314 850-1133(1610)
242 KOG0803|consensus 91.7 5.8 0.00013 45.7 15.7 225 15-258 43-289 (1312)
243 smart00288 VHS Domain present 91.6 4.5 9.7E-05 33.5 11.4 101 254-360 13-115 (133)
244 KOG1848|consensus 91.4 22 0.00047 40.8 19.0 222 173-394 848-1131(1610)
245 PF08623 TIP120: TATA-binding 91.2 2 4.3E-05 36.9 9.0 98 218-316 39-150 (169)
246 PF08569 Mo25: Mo25-like; Int 91.1 16 0.00035 35.7 20.0 187 203-396 73-284 (335)
247 cd03568 VHS_STAM VHS domain fa 91.1 8.4 0.00018 32.3 12.7 99 177-281 14-117 (144)
248 PF08064 UME: UME (NUC010) dom 91.1 4.5 9.8E-05 31.9 10.4 66 178-245 26-93 (107)
249 PF03224 V-ATPase_H_N: V-ATPas 91.0 16 0.00035 35.6 19.8 151 207-359 106-272 (312)
250 COG5656 SXM1 Importin, protein 91.0 24 0.00053 37.6 40.0 158 150-307 391-565 (970)
251 PF00790 VHS: VHS domain; Int 90.9 3.8 8.1E-05 34.3 10.5 79 282-360 40-122 (140)
252 PF11698 V-ATPase_H_C: V-ATPas 90.8 1.5 3.2E-05 35.0 7.3 67 168-234 44-114 (119)
253 cd03567 VHS_GGA VHS domain fam 90.8 8.6 0.00019 32.0 12.7 101 254-360 14-120 (139)
254 PF00514 Arm: Armadillo/beta-c 90.1 0.72 1.6E-05 28.9 4.2 30 544-573 11-40 (41)
255 PF00514 Arm: Armadillo/beta-c 90.1 0.71 1.5E-05 28.9 4.2 29 327-355 12-40 (41)
256 COG5095 TAF6 Transcription ini 90.0 5.5 0.00012 37.0 11.1 57 480-536 300-360 (450)
257 PF08389 Xpo1: Exportin 1-like 89.9 1.6 3.6E-05 36.8 7.8 110 28-138 3-135 (148)
258 KOG2005|consensus 89.9 26 0.00056 36.9 16.7 295 4-313 442-743 (878)
259 PF07571 DUF1546: Protein of u 89.9 1.2 2.6E-05 34.0 6.0 69 439-511 17-89 (92)
260 PF01603 B56: Protein phosphat 89.6 26 0.00056 35.6 26.2 253 336-613 99-370 (409)
261 PF11701 UNC45-central: Myosin 89.2 1.9 4.1E-05 36.9 7.5 131 260-391 20-155 (157)
262 KOG0889|consensus 89.2 78 0.0017 40.6 30.4 116 164-279 1030-1160(3550)
263 PF08767 CRM1_C: CRM1 C termin 89.0 21 0.00045 34.8 15.3 135 444-578 43-198 (319)
264 PF12765 Cohesin_HEAT: HEAT re 88.9 0.68 1.5E-05 29.2 3.4 25 283-307 17-41 (42)
265 PF08161 NUC173: NUC173 domain 88.5 18 0.00038 32.3 14.8 36 367-402 42-77 (198)
266 KOG2022|consensus 88.3 43 0.00093 36.6 37.2 179 183-368 440-631 (982)
267 KOG4500|consensus 88.3 29 0.00062 34.5 32.6 111 283-393 314-429 (604)
268 KOG2973|consensus 88.2 24 0.00051 33.4 20.8 100 172-274 8-111 (353)
269 KOG1048|consensus 87.9 43 0.00093 36.0 24.9 146 466-611 517-682 (717)
270 cd03565 VHS_Tom1 VHS domain fa 87.5 16 0.00034 30.6 11.9 102 254-361 14-120 (141)
271 KOG2122|consensus 87.3 66 0.0014 37.6 22.8 332 204-576 233-603 (2195)
272 cd03561 VHS VHS domain family; 87.0 15 0.00032 30.4 11.3 97 177-279 14-117 (133)
273 PF05536 Neurochondrin: Neuroc 86.7 46 0.001 35.2 31.1 179 180-361 70-266 (543)
274 PF12765 Cohesin_HEAT: HEAT re 86.5 0.87 1.9E-05 28.7 2.8 25 544-568 17-41 (42)
275 PF09324 DUF1981: Domain of un 86.4 5.8 0.00013 29.8 7.8 68 164-231 14-84 (86)
276 KOG1851|consensus 86.3 76 0.0016 37.3 35.3 138 437-576 1536-1680(1710)
277 PF12231 Rif1_N: Rap1-interact 86.0 40 0.00086 33.8 30.1 68 542-609 271-348 (372)
278 cd03567 VHS_GGA VHS domain fam 85.9 19 0.00041 30.0 11.2 96 437-538 14-119 (139)
279 KOG2081|consensus 85.8 46 0.001 34.3 32.5 146 167-314 153-321 (559)
280 cd07064 AlkD_like_1 A new stru 85.6 27 0.00059 31.5 15.8 133 206-357 46-180 (208)
281 smart00802 UME Domain in UVSB 85.5 11 0.00023 29.7 9.0 61 519-581 28-90 (107)
282 PF08767 CRM1_C: CRM1 C termin 85.1 39 0.00086 32.9 16.4 136 182-317 42-198 (319)
283 KOG4500|consensus 85.1 43 0.00093 33.3 31.1 143 431-575 318-476 (604)
284 cd03569 VHS_Hrs_Vps27p VHS dom 84.9 22 0.00047 29.8 12.6 109 177-291 18-131 (142)
285 cd06561 AlkD_like A new struct 84.9 28 0.00061 31.0 16.4 64 209-275 108-171 (197)
286 COG5095 TAF6 Transcription ini 84.9 17 0.00037 34.0 11.2 133 253-394 206-358 (450)
287 PF08569 Mo25: Mo25-like; Int 83.7 46 0.001 32.6 23.3 105 471-575 168-284 (335)
288 PF05536 Neurochondrin: Neuroc 82.9 69 0.0015 34.0 32.6 178 260-463 72-267 (543)
289 smart00567 EZ_HEAT E-Z type HE 82.3 1.8 3.9E-05 24.8 2.7 29 259-295 1-29 (30)
290 KOG0891|consensus 82.2 1.5E+02 0.0032 37.4 34.8 218 165-392 526-760 (2341)
291 PF14225 MOR2-PAG1_C: Cell mor 81.4 48 0.001 31.2 18.7 123 467-596 111-241 (262)
292 COG5537 IRR1 Cohesin [Cell div 80.9 39 0.00084 35.2 12.9 100 473-573 281-385 (740)
293 PF04078 Rcd1: Cell differenti 80.5 49 0.0011 30.7 14.3 67 128-194 94-166 (262)
294 KOG2122|consensus 80.5 1.3E+02 0.0028 35.5 22.4 70 466-535 529-601 (2195)
295 PF12397 U3snoRNP10: U3 small 80.0 30 0.00065 28.0 11.3 70 465-537 4-76 (121)
296 cd06561 AlkD_like A new struct 80.0 43 0.00094 29.8 17.1 64 287-357 108-171 (197)
297 KOG2759|consensus 79.8 68 0.0015 31.9 26.2 177 109-296 65-253 (442)
298 COG5537 IRR1 Cohesin [Cell div 79.7 84 0.0018 32.9 19.8 174 209-391 278-464 (740)
299 smart00288 VHS Domain present 79.2 35 0.00075 28.2 12.2 85 205-289 36-126 (133)
300 PF00790 VHS: VHS domain; Int 79.0 37 0.00079 28.4 13.0 72 167-238 42-121 (140)
301 KOG4199|consensus 78.7 65 0.0014 31.0 27.2 144 469-613 285-444 (461)
302 KOG1048|consensus 78.3 1E+02 0.0023 33.2 20.3 103 286-391 235-345 (717)
303 cd03565 VHS_Tom1 VHS domain fa 78.2 36 0.00077 28.5 10.2 96 437-538 14-118 (141)
304 KOG3678|consensus 77.7 82 0.0018 31.7 17.1 152 205-356 179-336 (832)
305 smart00185 ARM Armadillo/beta- 76.9 5.6 0.00012 24.4 4.1 28 328-355 13-40 (41)
306 cd03572 ENTH_epsin_related ENT 76.0 33 0.00071 27.8 8.9 35 282-316 36-70 (122)
307 smart00802 UME Domain in UVSB 75.7 37 0.00081 26.7 11.6 63 180-244 28-92 (107)
308 KOG2199|consensus 75.2 27 0.00058 34.1 9.4 100 255-361 22-123 (462)
309 COG5369 Uncharacterized conser 74.9 38 0.00082 34.7 10.8 145 168-312 432-593 (743)
310 smart00185 ARM Armadillo/beta- 74.8 4.7 0.0001 24.8 3.2 28 546-573 13-40 (41)
311 KOG2199|consensus 73.4 22 0.00048 34.6 8.5 72 467-538 45-121 (462)
312 PF03130 HEAT_PBS: PBS lyase H 73.0 2.7 5.8E-05 23.4 1.5 26 261-294 1-26 (27)
313 COG2733 Predicted membrane pro 71.7 1.1E+02 0.0023 30.3 20.2 98 165-276 235-332 (415)
314 PF07539 DRIM: Down-regulated 71.5 35 0.00075 28.5 8.4 31 283-313 16-46 (141)
315 KOG2229|consensus 70.3 1.3E+02 0.0029 30.8 26.5 142 161-307 14-160 (616)
316 COG5369 Uncharacterized conser 69.6 12 0.00026 38.1 6.0 107 467-573 431-544 (743)
317 PF09324 DUF1981: Domain of un 69.6 34 0.00073 25.7 7.3 65 545-609 17-84 (86)
318 PF14222 MOR2-PAG1_N: Cell mor 68.2 1.7E+02 0.0037 31.1 28.8 35 579-613 466-500 (552)
319 cd07064 AlkD_like_1 A new stru 66.4 1E+02 0.0022 27.9 17.5 130 170-314 49-180 (208)
320 PF14868 DUF4487: Domain of un 63.0 2.1E+02 0.0046 30.4 23.6 75 367-460 480-555 (559)
321 COG5101 CRM1 Importin beta-rel 62.3 2.2E+02 0.0047 30.3 33.0 62 216-277 540-602 (1053)
322 KOG0929|consensus 62.2 3.4E+02 0.0074 32.5 18.4 224 51-279 1036-1303(1514)
323 KOG3961|consensus 61.6 67 0.0015 28.6 8.3 72 466-537 113-186 (262)
324 cd03572 ENTH_epsin_related ENT 61.6 86 0.0019 25.4 10.7 66 432-499 5-70 (122)
325 KOG1087|consensus 61.4 1.4E+02 0.0029 30.9 11.8 103 252-360 12-116 (470)
326 cd00197 VHS_ENTH_ANTH VHS, ENT 60.1 86 0.0019 24.9 9.8 39 282-320 35-73 (115)
327 KOG2229|consensus 59.5 2.2E+02 0.0047 29.4 28.1 95 246-342 21-115 (616)
328 KOG4524|consensus 58.6 3.1E+02 0.0067 30.8 25.2 76 324-399 800-880 (1014)
329 PF12397 U3snoRNP10: U3 small 57.4 1E+02 0.0022 24.9 9.3 35 204-238 4-39 (121)
330 PF04078 Rcd1: Cell differenti 56.7 1.7E+02 0.0037 27.3 11.6 130 480-612 109-261 (262)
331 PF11841 DUF3361: Domain of un 56.1 1.3E+02 0.0028 25.7 10.8 93 485-577 35-134 (160)
332 PF14668 RICTOR_V: Rapamycin-i 56.0 48 0.001 23.9 5.6 53 484-536 4-59 (73)
333 COG4912 Predicted DNA alkylati 55.5 1.3E+02 0.0029 27.1 9.3 100 506-611 118-218 (222)
334 PF14668 RICTOR_V: Rapamycin-i 53.6 50 0.0011 23.9 5.4 54 523-576 4-60 (73)
335 PF07539 DRIM: Down-regulated 52.9 95 0.0021 26.0 7.8 30 165-194 15-44 (141)
336 cd00197 VHS_ENTH_ANTH VHS, ENT 52.6 1.2E+02 0.0025 24.2 11.1 37 466-502 36-72 (115)
337 PF12783 Sec7_N: Guanine nucle 52.1 1.6E+02 0.0034 25.5 9.9 93 443-535 37-146 (168)
338 COG5231 VMA13 Vacuolar H+-ATPa 52.1 26 0.00057 33.3 4.7 69 506-574 356-428 (432)
339 KOG2038|consensus 51.7 3.6E+02 0.0078 29.5 29.4 73 243-317 302-374 (988)
340 KOG1837|consensus 50.7 5.1E+02 0.011 31.0 32.2 70 508-577 1543-1614(1621)
341 PF11935 DUF3453: Domain of un 50.3 2.1E+02 0.0046 26.5 17.2 145 175-337 1-163 (239)
342 PF11935 DUF3453: Domain of un 50.2 2.1E+02 0.0046 26.5 17.8 71 374-460 1-75 (239)
343 PF10304 DUF2411: Domain of un 50.2 35 0.00075 20.7 3.5 20 593-612 15-34 (36)
344 KOG1851|consensus 50.0 5.3E+02 0.012 31.0 32.5 104 432-537 1573-1680(1710)
345 COG4912 Predicted DNA alkylati 49.6 1.2E+02 0.0025 27.5 8.0 69 203-274 115-183 (222)
346 KOG1087|consensus 48.2 1.3E+02 0.0028 31.0 9.3 99 435-539 12-116 (470)
347 PF08324 PUL: PUL domain; Int 47.6 2.5E+02 0.0054 26.5 11.9 99 515-613 119-231 (268)
348 PF14225 MOR2-PAG1_C: Cell mor 47.0 2.5E+02 0.0055 26.4 16.4 106 109-218 134-240 (262)
349 PF12333 Ipi1_N: Rix1 complex 44.7 97 0.0021 24.1 6.3 51 168-218 12-65 (102)
350 KOG3961|consensus 44.3 1E+02 0.0022 27.6 6.7 86 206-293 114-201 (262)
351 PF12612 TFCD_C: Tubulin foldi 44.3 1.9E+02 0.0041 25.7 9.0 31 165-195 5-35 (193)
352 PF11841 DUF3361: Domain of un 43.7 2.1E+02 0.0045 24.5 11.3 97 444-540 33-136 (160)
353 KOG1789|consensus 43.3 5.7E+02 0.012 29.4 23.7 128 185-313 1743-1883(2235)
354 COG5110 RPN1 26S proteasome re 42.3 4.2E+02 0.0092 27.7 21.4 298 1-313 437-744 (881)
355 KOG4346|consensus 40.8 5E+02 0.011 28.1 17.9 105 93-200 512-622 (849)
356 KOG4646|consensus 36.9 2.5E+02 0.0053 23.3 8.5 105 507-611 59-168 (173)
357 PF14631 FancD2: Fanconi anaem 36.8 7.6E+02 0.016 30.1 14.4 148 130-277 436-586 (1426)
358 COG5234 CIN1 Beta-tubulin fold 35.1 6.2E+02 0.014 27.5 25.2 151 163-314 242-417 (993)
359 COG2733 Predicted membrane pro 34.5 4.8E+02 0.01 26.0 24.1 27 433-459 306-332 (415)
360 KOG1837|consensus 32.7 9.6E+02 0.021 29.0 26.1 65 437-501 1550-1616(1621)
361 KOG4199|consensus 30.1 5.3E+02 0.012 25.2 21.5 131 181-313 256-403 (461)
362 PF06371 Drf_GBD: Diaphanous G 30.1 2.7E+02 0.0058 24.3 7.7 55 519-573 129-186 (187)
363 KOG2842|consensus 30.0 5.7E+02 0.012 25.5 13.5 104 12-115 59-173 (427)
364 PF14663 RasGEF_N_2: Rapamycin 29.6 1.1E+02 0.0024 24.5 4.6 33 503-535 5-37 (115)
365 PF04821 TIMELESS: Timeless pr 28.8 5E+02 0.011 24.5 10.4 65 7-79 7-71 (266)
366 KOG3036|consensus 27.8 5E+02 0.011 24.1 19.8 67 128-194 123-195 (293)
367 KOG1988|consensus 27.7 9E+02 0.02 27.1 12.2 107 432-539 28-135 (970)
368 KOG1222|consensus 27.3 7.1E+02 0.015 25.7 28.8 56 165-220 343-400 (791)
369 PF12333 Ipi1_N: Rix1 complex 27.2 2.2E+02 0.0048 22.1 5.8 53 465-517 9-64 (102)
370 PF04388 Hamartin: Hamartin pr 26.6 8.9E+02 0.019 26.7 14.3 88 165-254 68-161 (668)
371 KOG3036|consensus 26.0 5.4E+02 0.012 23.9 11.8 55 179-233 137-195 (293)
372 PF06371 Drf_GBD: Diaphanous G 25.2 3.6E+02 0.0078 23.5 7.7 56 479-534 128-186 (187)
373 KOG0929|consensus 25.1 1.3E+03 0.028 28.0 18.5 228 173-406 1043-1313(1514)
374 COG5101 CRM1 Importin beta-rel 24.9 8.9E+02 0.019 26.1 39.4 76 464-539 567-652 (1053)
375 PF11919 DUF3437: Domain of un 24.7 3.2E+02 0.0068 20.8 6.0 54 522-576 5-60 (90)
376 PF09759 Atx10homo_assoc: Spin 24.6 2.4E+02 0.0052 22.0 5.3 33 207-239 29-63 (102)
377 PF04388 Hamartin: Hamartin pr 24.3 9.8E+02 0.021 26.3 12.7 146 433-592 9-160 (668)
378 PF08158 NUC130_3NT: NUC130/3N 23.2 1.3E+02 0.0029 20.0 3.2 30 165-194 17-46 (52)
379 KOG1789|consensus 22.7 1.3E+03 0.027 27.0 27.7 96 177-273 1782-1882(2235)
380 PF09759 Atx10homo_assoc: Spin 22.7 2.7E+02 0.0058 21.8 5.3 32 507-538 29-62 (102)
381 COG5330 Uncharacterized protei 22.6 3.3E+02 0.0073 26.8 7.0 61 511-571 12-73 (364)
382 KOG1988|consensus 22.4 1.1E+03 0.024 26.4 11.2 104 474-577 31-134 (970)
383 PF01465 GRIP: GRIP domain; I 21.8 1.9E+02 0.0041 18.6 3.7 33 166-198 6-38 (46)
384 KOG0905|consensus 21.3 5.3E+02 0.011 30.0 8.8 112 179-304 902-1018(1639)
385 COG5330 Uncharacterized protei 21.2 4.8E+02 0.01 25.8 7.8 61 172-232 12-73 (364)
386 PF12612 TFCD_C: Tubulin foldi 20.8 5.9E+02 0.013 22.5 11.8 29 467-495 7-35 (193)
387 KOG4524|consensus 20.8 1.3E+03 0.028 26.4 37.7 87 507-593 804-898 (1014)
388 KOG4151|consensus 20.2 1.1E+03 0.023 26.1 10.7 31 204-234 582-612 (748)
No 1
>KOG0211|consensus
Probab=100.00 E-value=1.4e-51 Score=421.25 Aligned_cols=587 Identities=57% Similarity=0.827 Sum_probs=541.6
Q ss_pred CCCCCCCcchHHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcHHHHHHHHHHhccccCCCCC
Q psy14014 5 DSAPDDSLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDEDEVLLALAEQLGTFTPNVGG 84 (615)
Q Consensus 5 ~~~~~~~~~~i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~~vr~~a~~~l~~l~~~~~~ 84 (615)
+...+++.++|+.++....+.|...|..+++.++.++...|.+.++.+++|++.+.+.+.++|...++..+|.+....++
T Consensus 74 ~~~~~~~~~~ia~l~~e~~~~di~~r~~~~~~l~~~a~~~~~~~tr~~lipf~~e~~~~~dev~~~~a~~~~~~~~~v~~ 153 (759)
T KOG0211|consen 74 DDPNEDSLYPIAVLIDELSNTDIQLRLNSGRKLSNLALALGVERTRLELIPFLTEAEDDEDEVLLDLAEQLGTFLPDVGG 153 (759)
T ss_pred cCccccccccHHHHhhccCchhhhhhhhhhccccchhhhcccchhhhhhhhHHHHhccchhHHHHHHHHHhcccchhccc
Confidence 44445579999999999999999999999999999999999999999999999998866668999999999999999999
Q ss_pred cchhhhchHHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCC-hh
Q psy14014 85 PEYVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVT-AG 163 (615)
Q Consensus 85 ~~~~~~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~-~~ 163 (615)
+++.+.+++.+..++.+++..||+.+++.+..++...+++....++.|++.++..++|...|.+++++++..+..+. +.
T Consensus 154 ~~~~~~ll~~le~l~~~eet~vr~k~ve~l~~v~~~~~~~~~~~~lv~l~~~l~~~d~~~sr~sacglf~~~~~~~~~~~ 233 (759)
T KOG0211|consen 154 PEYAHMLLPPLELLATVEETGVREKAVESLLKVAVGLPKEKLREHLVPLLKRLATGDWFQSRLSACGLFGKLYVSLPDDA 233 (759)
T ss_pred hhHHHHhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHccchhhhhcchhhhhhhHHhccCCChHH
Confidence 99999999999999999999999999999999999999998899999999999999999999999999999999998 67
Q ss_pred hHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChh-hH
Q psy14014 164 VKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQS-DV 242 (615)
Q Consensus 164 ~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~-~~ 242 (615)
++.++.+.+.++++|.++.||..+++.++.+++.++.+.....++|.+..+..|+.+.||.+|+..+..+...+..+ ..
T Consensus 234 vk~elr~~~~~lc~d~~~~Vr~~~a~~l~~~a~~~~~~~~~s~v~~~~~~L~~DdqdsVr~~a~~~~~~l~~l~~~~~d~ 313 (759)
T KOG0211|consen 234 VKRELRPIVQSLCQDDTPMVRRAVASNLGNIAKVLESEIVKSEVLPTLIQLLRDDQDSVREAAVESLVSLLDLLDDDDDV 313 (759)
T ss_pred HHHHHHHHHHhhccccchhhHHHHHhhhHHHHHHHHHHHHHhhccHHHhhhhhcchhhHHHHHHHHHHHHHHhcCCchhh
Confidence 88999999999999999999999999999999999999899999999999999999999999999999999999987 77
Q ss_pred HHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhH
Q psy14014 243 EQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQEN 322 (615)
Q Consensus 243 ~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~ 322 (615)
...+.+.+.+..+|++|++|+.+++.+..+...+|.+....+..+.+...++|+..++|.+++.....+...+..+....
T Consensus 314 ~~~~~~~l~~~~~d~~~~v~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~l~~~~~~e~r~a~a~~~~~l~~~l~~~~~~~ 393 (759)
T KOG0211|consen 314 VKSLTESLVQAVEDGSWRVSYMVADKFSELSSAVGPSATRTQLVPPVSNLLKDEEWEVRYAIAKKVQKLACYLNASCYPN 393 (759)
T ss_pred hhhhhHHHHHHhcChhHHHHHHHhhhhhhHHHHhccccCcccchhhHHHHhcchhhhhhHHhhcchHHHhhhcCcccccc
Confidence 78899999999999999999999999999999999977777889999999999999999999999999998877544444
Q ss_pred HHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhh---hhhch
Q psy14014 323 IIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVN---EVIGI 399 (615)
Q Consensus 323 ~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~---~~~~~ 399 (615)
...+.++|.+..+..|.+..||.+.+..+..+...+|.+.....+.|.+...++|+.+.||...+..+..+. ...|.
T Consensus 394 i~~~~ilp~~~~lv~d~~~~vr~a~a~~~~~~~p~~~k~~ti~~llp~~~~~l~de~~~V~lnli~~ls~~~~v~~v~g~ 473 (759)
T KOG0211|consen 394 IPDSSILPEVQVLVLDNALHVRSALASVITGLSPILPKERTISELLPLLIGNLKDEDPIVRLNLIDKLSLLEEVNDVIGI 473 (759)
T ss_pred cchhhhhHHHHHHHhcccchHHHHHhccccccCccCCcCcCccccChhhhhhcchhhHHHHHhhHHHHHHHHhccCcccc
Confidence 556778999999999999999999999999999999998888999999999999999999999996554433 33333
Q ss_pred hHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCc
Q psy14014 400 QQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDH 479 (615)
Q Consensus 400 ~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~ 479 (615)
....+.. + |.+.++..+.+|++|.++++.++.++...|..++.+.+-+.+..++.|.
T Consensus 474 ~~~s~sl-----L------------------p~i~el~~d~~wRvr~ail~~ip~la~q~~~~~~~~~~~~l~~~~l~d~ 530 (759)
T KOG0211|consen 474 STVSNSL-----L------------------PAIVELAEDLLWRVRLAILEYIPQLALQLGVEFFDEKLAELLRTWLPDH 530 (759)
T ss_pred hhhhhhh-----h------------------hhhhhhccchhHHHHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhhhhhh
Confidence 3322222 2 6777888888999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCc
Q psy14014 480 VYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVA 559 (615)
Q Consensus 480 ~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~ 559 (615)
.+.+|++|...+..++..+|.+|....++|.++.+..++++.+|++.+.++..+++.+|.+.+.+.++|.+..+..|+++
T Consensus 531 v~~Ir~~aa~~l~~l~~~~G~~w~~~~~i~k~L~~~~q~~y~~R~t~l~si~~la~v~g~ei~~~~Llp~~~~l~~D~va 610 (759)
T KOG0211|consen 531 VYSIREAAARNLPALVETFGSEWARLEEIPKLLAMDLQDNYLVRMTTLFSIHELAEVLGQEITCEDLLPVFLDLVKDPVA 610 (759)
T ss_pred HHHHHHHHHHHhHHHHHHhCcchhHHHhhHHHHHHhcCcccchhhHHHHHHHHHHHHhccHHHHHHHhHHHHHhccCCch
Confidence 99999999999999999999888888999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhHhhhhhhHHhhHHHHHhhhcCCCCccHHHHHHHHHHHHhhc
Q psy14014 560 NVRFNVAKTLQKIGPILETNVIQSQVKPALDKLNGDTDVDVKYFAQEAISSIADS 614 (615)
Q Consensus 560 ~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~l~~d~d~~v~~~a~~a~~~~~~~ 614 (615)
+||.++++.|..+.+....+.....+.|++..|..|+|.+||++|..|++.++.+
T Consensus 611 nVR~nvak~L~~i~~~L~~~~~~~~v~pll~~L~~d~~~dvr~~a~~a~~~i~l~ 665 (759)
T KOG0211|consen 611 NVRINVAKHLPKILKLLDESVRDEEVLPLLETLSSDQELDVRYRAILAFGSIELS 665 (759)
T ss_pred hhhhhHHHHHHHHHhhcchHHHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHH
Confidence 9999999999999999988888999999999999999999999999999988753
No 2
>KOG0211|consensus
Probab=100.00 E-value=2e-31 Score=273.58 Aligned_cols=533 Identities=23% Similarity=0.310 Sum_probs=458.9
Q ss_pred HHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcH-HHHHHHHHHhccccCCCCCcchhhhchH
Q psy14014 15 IAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDED-EVLLALAEQLGTFTPNVGGPEYVHCLLP 93 (615)
Q Consensus 15 i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~-~vr~~a~~~l~~l~~~~~~~~~~~~l~~ 93 (615)
|-++-+.+ .+...++..+...++.+....|...+..-++|-+-.+..++. .||..++..+-+++.....+.....+.|
T Consensus 123 ipf~~e~~-~~~dev~~~~a~~~~~~~~~v~~~~~~~~ll~~le~l~~~eet~vr~k~ve~l~~v~~~~~~~~~~~~lv~ 201 (759)
T KOG0211|consen 123 IPFLTEAE-DDEDEVLLDLAEQLGTFLPDVGGPEYAHMLLPPLELLATVEETGVREKAVESLLKVAVGLPKEKLREHLVP 201 (759)
T ss_pred hhHHHHhc-cchhHHHHHHHHHhcccchhccchhHHHHhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHH
Confidence 34444555 666668888888888887777766577777777777766666 4999999999988876655555678899
Q ss_pred HHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCCh-hhHHHHHHHH
Q psy14014 94 PLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTA-GVKAELRSHF 172 (615)
Q Consensus 94 ~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~-~~~~~l~~~l 172 (615)
++..+..++.-.-|..++..+.......+++.++..+.|...++++|+...+|..++.-++.+...+.. .....+++.+
T Consensus 202 l~~~l~~~d~~~sr~sacglf~~~~~~~~~~~vk~elr~~~~~lc~d~~~~Vr~~~a~~l~~~a~~~~~~~~~s~v~~~~ 281 (759)
T KOG0211|consen 202 LLKRLATGDWFQSRLSACGLFGKLYVSLPDDAVKRELRPIVQSLCQDDTPMVRRAVASNLGNIAKVLESEIVKSEVLPTL 281 (759)
T ss_pred HHHHccchhhhhcchhhhhhhHHhccCCChHHHHHHHHHHHHhhccccchhhHHHHHhhhHHHHHHHHHHHHHhhccHHH
Confidence 999998886667788888888888888888888999999999999999999999999999988888754 4566788999
Q ss_pred HHHhCCCChHHHHHHHHhHHHHHHHhchh-hhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHH
Q psy14014 173 RNLCQDDTPMVRRAAAGKLGELAKVVEVD-YLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLR 251 (615)
Q Consensus 173 ~~l~~d~~~~vR~~a~~~l~~l~~~~~~~-~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~ 251 (615)
..+..|....||..+...+..+...+..+ ...+.+.+.+.+..+|.++.+|......+..+.+.++++.......+...
T Consensus 282 ~~L~~DdqdsVr~~a~~~~~~l~~l~~~~~d~~~~~~~~l~~~~~d~~~~v~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 361 (759)
T KOG0211|consen 282 IQLLRDDQDSVREAAVESLVSLLDLLDDDDDVVKSLTESLVQAVEDGSWRVSYMVADKFSELSSAVGPSATRTQLVPPVS 361 (759)
T ss_pred hhhhhcchhhHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHhcChhHHHHHHHhhhhhhHHHHhccccCcccchhhHH
Confidence 99999999999999999999999988776 77788999999999999999999999999999999998777777899999
Q ss_pred HhcCCCChHHHHHHHHHHHHHHHHhC----ccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHh
Q psy14014 252 QCSGDTSWRVRYMVADKFTDLQKAVG----PEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTY 327 (615)
Q Consensus 252 ~~~~d~~~~vR~~~~~~l~~l~~~~~----~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~ 327 (615)
..++|+.|.+|.+.+.-...+..... .+...+.++|.+..+..|.+..||.+.+.........++++. ....
T Consensus 362 ~l~~~~~~e~r~a~a~~~~~l~~~l~~~~~~~i~~~~ilp~~~~lv~d~~~~vr~a~a~~~~~~~p~~~k~~----ti~~ 437 (759)
T KOG0211|consen 362 NLLKDEEWEVRYAIAKKVQKLACYLNASCYPNIPDSSILPEVQVLVLDNALHVRSALASVITGLSPILPKER----TISE 437 (759)
T ss_pred HHhcchhhhhhHHhhcchHHHhhhcCcccccccchhhhhHHHHHHHhcccchHHHHHhccccccCccCCcCc----Cccc
Confidence 99999999999999999999988877 444556788999999999999999988888877766666543 3567
Q ss_pred hHHHHHHhhCCCCHHHHHHHHHHH---HhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHH
Q psy14014 328 ILPYVKDLVADPNQHVKSALASVI---MGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRV 404 (615)
Q Consensus 328 l~p~l~~~~~d~~~~vR~~~~~~l---~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~ 404 (615)
+.|.+...++|..+.||....+.+ ..+-.+.|.....+.++|.+..+..|. .|+.
T Consensus 438 llp~~~~~l~de~~~V~lnli~~ls~~~~v~~v~g~~~~s~slLp~i~el~~d~----------------------~wRv 495 (759)
T KOG0211|consen 438 LLPLLIGNLKDEDPIVRLNLIDKLSLLEEVNDVIGISTVSNSLLPAIVELAEDL----------------------LWRV 495 (759)
T ss_pred cChhhhhhcchhhHHHHHhhHHHHHHHHhccCcccchhhhhhhhhhhhhhccch----------------------hHHH
Confidence 889999999999999999998544 444455677777788888888777663 4666
Q ss_pred HHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHH
Q psy14014 405 RLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIR 484 (615)
Q Consensus 405 ~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR 484 (615)
+.++++++|.++.+.|..||++.+. +.+..++.|..+.+|.++...+..++..+|.+|....++|.++....++++-+|
T Consensus 496 r~ail~~ip~la~q~~~~~~~~~~~-~l~~~~l~d~v~~Ir~~aa~~l~~l~~~~G~~w~~~~~i~k~L~~~~q~~y~~R 574 (759)
T KOG0211|consen 496 RLAILEYIPQLALQLGVEFFDEKLA-ELLRTWLPDHVYSIREAAARNLPALVETFGSEWARLEEIPKLLAMDLQDNYLVR 574 (759)
T ss_pred HHHHHHHHHHHHHhhhhHHhhHHHH-HHHHhhhhhhHHHHHHHHHHHhHHHHHHhCcchhHHHhhHHHHHHhcCcccchh
Confidence 6667778888888889889888877 688899999999999999999999999999999999999999999888899999
Q ss_pred HHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHH
Q psy14014 485 EAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFN 564 (615)
Q Consensus 485 ~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~ 564 (615)
.+.+.++..++..+|.+.+.+.++|.+.++..|+.+++|.++++.+..+......+...+.+.|.+..+..|.+.+||+.
T Consensus 575 ~t~l~si~~la~v~g~ei~~~~Llp~~~~l~~D~vanVR~nvak~L~~i~~~L~~~~~~~~v~pll~~L~~d~~~dvr~~ 654 (759)
T KOG0211|consen 575 MTTLFSIHELAEVLGQEITCEDLLPVFLDLVKDPVANVRINVAKHLPKILKLLDESVRDEEVLPLLETLSSDQELDVRYR 654 (759)
T ss_pred hHHHHHHHHHHHHhccHHHHHHHhHHHHHhccCCchhhhhhHHHHHHHHHhhcchHHHHHHHHHHHHHhccCcccchhHH
Confidence 99999999999999999998999999999999999999999999999999999988889999999999999999999999
Q ss_pred HHHHHHHHhHh
Q psy14014 565 VAKTLQKIGPI 575 (615)
Q Consensus 565 a~~~l~~l~~~ 575 (615)
|..+++.+...
T Consensus 655 a~~a~~~i~l~ 665 (759)
T KOG0211|consen 655 AILAFGSIELS 665 (759)
T ss_pred HHHHHHHHHHH
Confidence 99999887643
No 3
>KOG2023|consensus
Probab=100.00 E-value=1.2e-30 Score=251.84 Aligned_cols=600 Identities=19% Similarity=0.197 Sum_probs=424.1
Q ss_pred CCCCCCcchHHHHHHHhcCccHHHHHHHHhcHHHHHHH----------------------------------hCcchhhc
Q psy14014 6 SAPDDSLYPIAVLIDELKNEDVQLRLNSIKKLSTIALA----------------------------------LGQERTRG 51 (615)
Q Consensus 6 ~~~~~~~~~i~~ll~~l~s~d~~~R~~a~~~l~~~~~~----------------------------------~~~~~~~~ 51 (615)
-+-++-+..|..+++.-.|+|+.+|..+...+...-.. .+.....+
T Consensus 6 ~p~e~~l~ql~~lLk~s~Spn~~~~~~~~~~leq~~~~pdfnnYL~~IL~~~~~~d~~~Rs~aGLlLKNnvr~~~~~~~~ 85 (885)
T KOG2023|consen 6 QPDEQGLQQLAQLLKNSQSPNSETRNNVQEKLEQFNLFPDFNNYLIYILIRAKSEDVPTRSLAGLLLKNNVRGHYNSIPS 85 (885)
T ss_pred cccHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhcccchhceeeEEEecccccchhHHHHhhhhHhccccccccCCCh
Confidence 34455566788888888899999998888877766320 00001222
Q ss_pred cchhhhhh----hcCCcHH-HHHHHHHHhccccCCCCCcchhhhchHHHhhhhcCchhHHHHHHHHHHHHHHhhcChh--
Q psy14014 52 ELIPFLTE----TIYDEDE-VLLALAEQLGTFTPNVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSPH-- 124 (615)
Q Consensus 52 ~ll~~l~~----~~~~~~~-vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~-- 124 (615)
+.+.+++. .+.|+++ +|..+...+.+++.. ++-.+|+.++|.|.+++..++.+..+.|..+|.++++.....
T Consensus 86 ~~~~yiKs~~l~~lgd~~~lIr~tvGivITTI~s~-~~~~~wpelLp~L~~~L~s~d~n~~EgA~~AL~KIcEDsa~~ld 164 (885)
T KOG2023|consen 86 EVLDYIKSECLHGLGDASPLIRATVGIVITTIAST-GGLQHWPELLPQLCELLDSPDYNTCEGAFGALQKICEDSAQFLD 164 (885)
T ss_pred HHHHHHHHHHHhhccCchHHHHhhhhheeeeeecc-cccccchhHHHHHHHHhcCCcccccchhHHHHHHHHhhhHHHHh
Confidence 33333322 3445555 666666666665542 235678999999999999999999999999999999876431
Q ss_pred -----HHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhh---HHHHHHHHHHHhCCCChHHHHHHHHhHHHHHH
Q psy14014 125 -----DLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGV---KAELRSHFRNLCQDDTPMVRRAAAGKLGELAK 196 (615)
Q Consensus 125 -----~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~---~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~ 196 (615)
.-.+.++|.+.++..+++..+|..|..+++.+...-+... ...+++.+..+..|++++||+.+|.++..+.+
T Consensus 165 s~~~~rpl~~mipkfl~f~~h~spkiRs~A~~cvNq~i~~~~qal~~~iD~Fle~lFalanD~~~eVRk~vC~alv~Lle 244 (885)
T KOG2023|consen 165 SDVLTRPLNIMIPKFLQFFKHPSPKIRSHAVGCVNQFIIIQTQALYVHIDKFLEILFALANDEDPEVRKNVCRALVFLLE 244 (885)
T ss_pred hhcccCchHHhHHHHHHHHhCCChhHHHHHHhhhhheeecCcHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHH
Confidence 1234589999999999999999999999998876665543 45677778888899999999999999999988
Q ss_pred Hhchh--hhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChh----hHHHhHHHHHHHh----------cC-----
Q psy14014 197 VVEVD--YLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQS----DVEQLVMPTLRQC----------SG----- 255 (615)
Q Consensus 197 ~~~~~--~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~----~~~~~l~~~l~~~----------~~----- 255 (615)
..++. .....++.++.+..+|.+.+|.-.|.+.+..+++.--.. .+.+.++|.+.+. ++
T Consensus 245 vr~dkl~phl~~IveyML~~tqd~dE~VALEACEFwla~aeqpi~~~~L~p~l~kliPvLl~~M~Ysd~D~~LL~~~eeD 324 (885)
T KOG2023|consen 245 VRPDKLVPHLDNIVEYMLQRTQDVDENVALEACEFWLALAEQPICKEVLQPYLDKLIPVLLSGMVYSDDDIILLKNNEED 324 (885)
T ss_pred hcHHhcccchHHHHHHHHHHccCcchhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHccCccccccHHHhcCcccc
Confidence 76553 345678888899999999999999999999998865332 2344566666421 11
Q ss_pred -------------------------------C----------CChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhc
Q psy14014 256 -------------------------------D----------TSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLK 294 (615)
Q Consensus 256 -------------------------------d----------~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~ 294 (615)
| .+|..|+..+.++.-++..+|.+. .+.++|.+...+.
T Consensus 325 ~~vpDreeDIkPRfhksk~~~~~~~~~~eDdddDe~DDdD~~~dWNLRkCSAAaLDVLanvf~~el-L~~l~PlLk~~L~ 403 (885)
T KOG2023|consen 325 ESVPDREEDIKPRFHKSKEHGNGEDADDEDDDDDEDDDDDAFSDWNLRKCSAAALDVLANVFGDEL-LPILLPLLKEHLS 403 (885)
T ss_pred ccCCchhhhccchhhhchhccCccccccccccccccccccccccccHhhccHHHHHHHHHhhHHHH-HHHHHHHHHHHcC
Confidence 0 139999999999999999998774 5788999999999
Q ss_pred CCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHH---H
Q psy14014 295 DSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPL---F 371 (615)
Q Consensus 295 d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~---l 371 (615)
++++.||++++-++|.+++.+-.... .+++.++|++..+++|..+-||...|++|++.+..+-.+.-.+++.|. +
T Consensus 404 ~~~W~vrEagvLAlGAIAEGcM~g~~--p~LpeLip~l~~~L~DKkplVRsITCWTLsRys~wv~~~~~~~~f~pvL~~l 481 (885)
T KOG2023|consen 404 SEEWKVREAGVLALGAIAEGCMQGFV--PHLPELIPFLLSLLDDKKPLVRSITCWTLSRYSKWVVQDSRDEYFKPVLEGL 481 (885)
T ss_pred cchhhhhhhhHHHHHHHHHHHhhhcc--cchHHHHHHHHHHhccCccceeeeeeeeHhhhhhhHhcCChHhhhHHHHHHH
Confidence 99999999999999999986543332 457889999999999999999999999999999876554333344444 4
Q ss_pred HHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHH--------------------HHHhhhhhhhhccc----cchhhhh
Q psy14014 372 LSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRL--------------------AIIEYMPLLAGQLG----VEFFDEK 427 (615)
Q Consensus 372 ~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~--------------------~i~~~l~~l~~~~~----~~~~~~~ 427 (615)
...+-|.+..|+++|++++..+-+..+++-.. .+ -..+.+..++...| ...|.+.
T Consensus 482 l~~llD~NK~VQEAAcsAfAtleE~A~~eLVp-~l~~IL~~l~~af~kYQ~KNLlILYDAIgtlAdsvg~~Ln~~~Yiqi 560 (885)
T KOG2023|consen 482 LRRLLDSNKKVQEAACSAFATLEEEAGEELVP-YLEYILDQLVFAFGKYQKKNLLILYDAIGTLADSVGHALNKPAYIQI 560 (885)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHhccchhHH-HHHHHHHHHHHHHHHHhhcceehHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 44556889999999999999887766543111 11 11233444444443 2344555
Q ss_pred hhhHHHHHhh--hcCCchHHHHHHHHhHHHHhhhChHh--HHHHHHHHHHHhc-----------CC-----cchHHHHHH
Q psy14014 428 LNALSIVELA--EDSKWRVRLAIIEYMPLLAGQLGVEF--FDEKLNALCMTWL-----------VD-----HVYAIREAA 487 (615)
Q Consensus 428 l~~~~i~~~~--~~~~~~vr~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l-----------~d-----~~~~vR~~a 487 (615)
+..|.+.++- +|++. --.-.++++..+++++|..| |.+.+...++..+ +| ++...-..+
T Consensus 561 LmPPLi~KW~~lsd~DK-dLfPLLEClSsia~AL~~gF~P~~~~Vy~Rc~~il~~t~q~~~~~~~~~~~~~pdkdfiI~s 639 (885)
T KOG2023|consen 561 LMPPLIEKWELLSDSDK-DLFPLLECLSSIASALGVGFLPYAQPVYQRCFRILQKTLQLLAKVQQDPTVEAPDKDFIIVS 639 (885)
T ss_pred hccHHHHHHHhcCcccc-hHHHHHHHHHHHHHHHhccccccCHHHHHHHHHHHHHHHHHHHhccCCccccCCCcceEEEe
Confidence 6656666653 34332 23457889999999887654 1222222222221 11 233344578
Q ss_pred HHHHHHHHHHhChHH----hhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhh--HHHhhHHHHHhhCCCCCchH
Q psy14014 488 TLNLKKLVEQFGSEW----AQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTV--TANFLLPTVLNMAGDNVANV 561 (615)
Q Consensus 488 ~~~l~~l~~~~~~~~----~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~--~~~~i~~~l~~~~~D~~~~v 561 (615)
+..+.-+++.+|... ....+...++..+.|+.+.||+++...+|.+.+.|.+.. ....++|.+-.-++-..-.|
T Consensus 640 LDL~SGLaegLg~~ie~Lva~snl~~lll~C~~D~~peVRQS~FALLGDltk~c~~~v~p~~~~fl~~lg~Nl~~~~isv 719 (885)
T KOG2023|consen 640 LDLLSGLAEGLGSHIEPLVAQSNLLDLLLQCLQDEVPEVRQSAFALLGDLTKACFEHVIPNLADFLPILGANLNPENISV 719 (885)
T ss_pred HHHHhHHHHHhhhchHHHhhhccHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHhhcCChhhchH
Confidence 888999999887642 234578888999999999999999999999999885433 23456666665555556679
Q ss_pred HHHHHHHHHHHhHhhhhhhHHhhHHHHHhhh---c--CCCCccHHHHHHHHHHHHh
Q psy14014 562 RFNVAKTLQKIGPILETNVIQSQVKPALDKL---N--GDTDVDVKYFAQEAISSIA 612 (615)
Q Consensus 562 r~~a~~~l~~l~~~~~~~~~~~~~~~~l~~l---~--~d~d~~v~~~a~~a~~~~~ 612 (615)
-.+|+++++.++-.++.+.. +.+.+++..| . ...+..+-++..-.+|.++
T Consensus 720 ~nNA~WAiGeia~k~g~~~~-~~v~~vl~~L~~iin~~~~~~tllENtAITIGrLg 774 (885)
T KOG2023|consen 720 CNNAIWAIGEIALKMGLKMK-QYVSPVLEDLITIINRQNTPKTLLENTAITIGRLG 774 (885)
T ss_pred HHHHHHHHHHHHHHhchhhh-hHHHHHHHHHHHHhcccCchHHHHHhhhhhhhhhh
Confidence 99999999999988875432 6667777666 1 2334455555555555443
No 4
>KOG2171|consensus
Probab=100.00 E-value=3.5e-27 Score=243.77 Aligned_cols=596 Identities=15% Similarity=0.151 Sum_probs=412.9
Q ss_pred HHHHHhcCcc-HHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcHH-HHHHHHHHhccccCCCCC--cchhhhch
Q psy14014 17 VLIDELKNED-VQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDEDE-VLLALAEQLGTFTPNVGG--PEYVHCLL 92 (615)
Q Consensus 17 ~ll~~l~s~d-~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~~-vr~~a~~~l~~l~~~~~~--~~~~~~l~ 92 (615)
.+|..++++. +.+|.+.++.++++++...++ .|+++++++.+..++.++ .|..+...|..+.+..+. ..|...+.
T Consensus 83 ~lL~~~~~E~~~~vr~k~~dviAeia~~~l~e-~WPell~~L~q~~~S~~~~~rE~al~il~s~~~~~~~~~~~~~~~l~ 161 (1075)
T KOG2171|consen 83 SLLEIIQSETEPSVRHKLADVIAEIARNDLPE-KWPELLQFLFQSTKSPNPSLRESALLILSSLPETFGNTLQPHLDDLL 161 (1075)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHhcccc-chHHHHHHHHHHhcCCCcchhHHHHHHHHhhhhhhccccchhHHHHH
Confidence 4556666654 559999999999999999999 999999999999999886 999999999888876654 45788999
Q ss_pred HHHhhhhcCchhHHHHHHHHHHHHHHhhcC-hhHHh---hhHHHHHHH----hhcCCCcchhhhHHhhhhhhccCCChh-
Q psy14014 93 PPLESLATVEETVVRDKAVESLRLISAQHS-PHDLE---AHFVPLVQR----LASGDWFTSRTSACGLFSVCYPRVTAG- 163 (615)
Q Consensus 93 ~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~-~~~~~---~~~l~~l~~----l~~~~~~~~r~~a~~~l~~~~~~~~~~- 163 (615)
++|.+.++|++..||-.|+.++..++..++ +.... ..++|-+.. ...+++...-..+...+..+....++-
T Consensus 162 ~lf~q~~~d~s~~vr~~a~rA~~a~~~~~~~~~~~~~~~~~llP~~l~vl~~~i~~~d~~~a~~~l~~l~El~e~~pk~l 241 (1075)
T KOG2171|consen 162 RLFSQTMTDPSSPVRVAAVRALGAFAEYLENNKSEVDKFRDLLPSLLNVLQEVIQDGDDDAAKSALEALIELLESEPKLL 241 (1075)
T ss_pred HHHHHhccCCcchHHHHHHHHHHHHHHHhccchHHHHHHHHHhHHHHHHhHhhhhccchHHHHHHHHHHHHHHhhchHHH
Confidence 999999999888899999999999999996 22222 235554333 333444433455566666665555543
Q ss_pred --hHHHHHHHHHHHhCC--CChHHHHHHHHhHHHHHHHhch-----hhhHhhhHHHHHHhhccC----------------
Q psy14014 164 --VKAELRSHFRNLCQD--DTPMVRRAAAGKLGELAKVVEV-----DYLKTDIIPMFVNLAQDE---------------- 218 (615)
Q Consensus 164 --~~~~l~~~l~~l~~d--~~~~vR~~a~~~l~~l~~~~~~-----~~~~~~ll~~l~~~~~d~---------------- 218 (615)
....++......+.+ -+..+|..+++.+..+++..+. ....+.+++.+.....|.
T Consensus 242 ~~~l~~ii~~~l~Ia~n~~l~~~~R~~ALe~ivs~~e~Ap~~~k~~~~~~~~lv~~~l~~mte~~~D~ew~~~d~~ded~ 321 (1075)
T KOG2171|consen 242 RPHLSQIIQFSLEIAKNKELENSIRHLALEFLVSLSEYAPAMCKKLALLGHTLVPVLLAMMTEEEDDDEWSNEDDLDEDD 321 (1075)
T ss_pred HHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHhhHHHhhhchhhhccHHHHHHHhcCCcccchhhcccccccccc
Confidence 344555666666554 5788999999999999988543 224556777766665321
Q ss_pred chhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccc--hhhhHHHHHHHhhcCC
Q psy14014 219 QDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEI--TKTDLVQAFQMLLKDS 296 (615)
Q Consensus 219 ~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l~d~ 296 (615)
...-...|.+++..++..+|++...+.+++.+...+..++|+-|.++..+++.++...++.+ ..+++++..+..++|+
T Consensus 322 ~~~~~~~A~~~lDrlA~~L~g~~v~p~~~~~l~~~l~S~~w~~R~AaL~Als~i~EGc~~~m~~~l~~Il~~Vl~~l~Dp 401 (1075)
T KOG2171|consen 322 EETPYRAAEQALDRLALHLGGKQVLPPLFEALEAMLQSTEWKERHAALLALSVIAEGCSDVMIGNLPKILPIVLNGLNDP 401 (1075)
T ss_pred ccCcHHHHHHHHHHHHhcCChhhehHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCC
Confidence 12256788999999999999999999999999999999999999999999999998776554 2468899999999999
Q ss_pred cHHHHHHHHHHHHHHHhhccccchh------------------------------------------HHHHHhhHH-HHH
Q psy14014 297 EAEVRAAAANKVRDFCQNLDAYNQE------------------------------------------NIIMTYILP-YVK 333 (615)
Q Consensus 297 ~~~vr~~a~~~l~~~~~~~~~~~~~------------------------------------------~~~~~~l~p-~l~ 333 (615)
+|.||.+|+.+++++...+.++..+ ..+++.++. .+.
T Consensus 402 hprVr~AA~naigQ~stdl~p~iqk~~~e~l~~aL~~~ld~~~~~rV~ahAa~al~nf~E~~~~~~l~pYLd~lm~~~l~ 481 (1075)
T KOG2171|consen 402 HPRVRYAALNAIGQMSTDLQPEIQKKHHERLPPALIALLDSTQNVRVQAHAAAALVNFSEECDKSILEPYLDGLMEKKLL 481 (1075)
T ss_pred CHHHHHHHHHHHHhhhhhhcHHHHHHHHHhccHHHHHHhcccCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999887665221 112233333 333
Q ss_pred HhhCCCCHHHHHHHHHHHHhhchhhcc--hhhhhhhHHHHHHhhcCCC----hhHHHHHHHhhhHhhhhhchhHHHHHH-
Q psy14014 334 DLVADPNQHVKSALASVIMGLSPILGK--HNTVDHLLPLFLSQLKDEC----PEVRLNIISNLDCVNEVIGIQQWRVRL- 406 (615)
Q Consensus 334 ~~~~d~~~~vR~~~~~~l~~l~~~~g~--~~~~~~l~p~l~~~l~d~~----~~vr~~a~~~l~~l~~~~~~~~~~~~~- 406 (615)
.+.+...+.||..++.+|++++...+. ..+.+.++|.+.+++...+ ..+|...+++++.+...+|.+.+.+..
T Consensus 482 ~L~~~~~~~v~e~vvtaIasvA~AA~~~F~pY~d~~Mp~L~~~L~n~~~~d~r~LrgktmEcisli~~AVGke~F~~~a~ 561 (1075)
T KOG2171|consen 482 LLLQSSKPYVQEQAVTAIASVADAAQEKFIPYFDRLMPLLKNFLQNADDKDLRELRGKTMECLSLIARAVGKEKFLPLAE 561 (1075)
T ss_pred HHhcCCchhHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHHHHHHhCCCchhhHHHHhhHHHHHHHHHHHhhhhhhhHhHH
Confidence 456788899999999999999987775 3457788999999887533 357778888888877777765443321
Q ss_pred H----------------------HHhhhhhhhhccccchhh--hhhhhHHHHHh--------------------------
Q psy14014 407 A----------------------IIEYMPLLAGQLGVEFFD--EKLNALSIVEL-------------------------- 436 (615)
Q Consensus 407 ~----------------------i~~~l~~l~~~~~~~~~~--~~l~~~~i~~~-------------------------- 436 (615)
. .+.++..++..+|.+|-+ ..+.-|.+...
T Consensus 562 eliqll~~~~~~~~~~dd~~~sy~~~~warmc~ilg~~F~p~L~~Vmppl~~ta~~~p~~~~~d~~d~e~~~~~~~~e~~ 641 (1075)
T KOG2171|consen 562 ELIQLLLELQGSDQDDDDPLRSYMIAFWARMCRILGDDFAPFLPVVMPPLLKTARLDPDVALSDEEDEEEEQDLDGWEVV 641 (1075)
T ss_pred HHHHHHHhhcccchhhccccHHHHHHHHHHHHHHhchhhHhHHHHHhHHHHHhhccCCcccCcCchhhhhccccccchhh
Confidence 0 111222334444544411 11110111110
Q ss_pred -hhcC-CchH-------HHHHHHHhHHHHhhhChHh--HHHHHHH-HHHHhcCCcchHHHHHHHHHHHHHHHHh------
Q psy14014 437 -AEDS-KWRV-------RLAIIEYMPLLAGQLGVEF--FDEKLNA-LCMTWLVDHVYAIREAATLNLKKLVEQF------ 498 (615)
Q Consensus 437 -~~~~-~~~v-------r~~~~~~l~~l~~~~~~~~--~~~~l~~-~l~~~l~d~~~~vR~~a~~~l~~l~~~~------ 498 (615)
..+. ...+ +..++..++.++...+..| |....++ .+..+...-...||.+|+.++..+++..
T Consensus 642 ~~~~~e~~~I~Tsvl~eK~~A~~~Lv~~a~~lk~~F~pYve~v~~l~v~~l~f~fhdgVR~aa~~~~p~ll~~~~~A~~~ 721 (1075)
T KOG2171|consen 642 ELGDKENIGIRTSVLDEKETACEALGEYAKELKEAFAPYVEQVVELMVPLLKFYFHDGVRKAAAESMPQLLTCALKACQG 721 (1075)
T ss_pred ccCCceeeeeeehhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 0011 1222 4567888888887766543 3344444 3333444567789999999999887642
Q ss_pred ChHHh---hhchhHHHHhhhcC-CCchHHHHHHHHHHHHHhhhCh-----------------------------------
Q psy14014 499 GSEWA---QSTVIPKVVAMSRD-QNYLHRMTCLFCINVLAEACGP----------------------------------- 539 (615)
Q Consensus 499 ~~~~~---~~~i~~~l~~~~~d-~~~~~R~~a~~~l~~l~~~~~~----------------------------------- 539 (615)
++... -..+.|.+.+.+.+ +...+-.....+++...+.+|.
T Consensus 722 ~p~~l~~l~~~~~~~l~~~l~~E~e~~vl~~vl~~f~~~i~~~G~~~L~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~e 801 (1075)
T KOG2171|consen 722 GPEYLKQLWEAIRPALIKALEEEPETEVLSEILESFAECIEVMGDNCLNEDGLEALLGGLLAQLLQHFKRMQDRQEEDDE 801 (1075)
T ss_pred ChHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHhcCcccCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 22211 12355555544333 3444444455555555443221
Q ss_pred -----------------------------------hh--HHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhh--hh
Q psy14014 540 -----------------------------------TV--TANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILET--NV 580 (615)
Q Consensus 540 -----------------------------------~~--~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~--~~ 580 (615)
++ +-..+.|.+.+++..+.+.-|..+.-+++.+++..++ ..
T Consensus 802 ed~d~~eee~~~e~d~~ll~~i~~i~~~l~k~~k~~f~p~f~~~~p~iv~~l~~~~~~~r~~av~~~~d~ie~~~~a~~~ 881 (1075)
T KOG2171|consen 802 EDDDIEEEEDLDEQDAYLLDAISDILAALAKALKGSFLPFFENFLPLIVKLLKSKKTVARQWAVCIFDDLIEGCGEASAK 881 (1075)
T ss_pred hhhhhHHHHHHhhhhHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhcccccch
Confidence 11 1245677777777777777799999999998888764 35
Q ss_pred HHhhHHHHHhhhcCCCCccHHHHHHHHHHHHhh
Q psy14014 581 IQSQVKPALDKLNGDTDVDVKYFAQEAISSIAD 613 (615)
Q Consensus 581 ~~~~~~~~l~~l~~d~d~~v~~~a~~a~~~~~~ 613 (615)
+.+.+.|.+-.+..|.+++||++|.+.++++++
T Consensus 882 ~~~~~~p~~~~~~~d~~pEVRqaAsYGiGvlaq 914 (1075)
T KOG2171|consen 882 YKERFLPLVLEALQDSDPEVRQAAAYGMGVLAQ 914 (1075)
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 567788888888999999999999999999986
No 5
>KOG2171|consensus
Probab=99.97 E-value=6.7e-27 Score=241.71 Aligned_cols=552 Identities=16% Similarity=0.206 Sum_probs=408.5
Q ss_pred chHHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCC-cH-HHHHHHHHHhccccC----CCCCcc
Q psy14014 13 YPIAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYD-ED-EVLLALAEQLGTFTP----NVGGPE 86 (615)
Q Consensus 13 ~~i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~-~~-~vr~~a~~~l~~l~~----~~~~~~ 86 (615)
.++..++..+.|+|..+|..|-+.+..++. .+ .++|.|...+.. ++ ++|..++..+.++.. .+. .+
T Consensus 4 ~~l~qLl~~l~spDn~vr~~Ae~~l~~~~~---~~----~~l~~L~~i~~~~~~p~~Rq~aaVl~Rkl~~~~w~~l~-~e 75 (1075)
T KOG2171|consen 4 APLEQLLQQLLSPDNEVRRQAEEALETLAK---TE----PLLPALAHILATSADPQVRQLAAVLLRKLLTKHWSRLS-AE 75 (1075)
T ss_pred hHHHHHHHHhcCCCchHHHHHHHHHHHhhc---cc----chHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhhcCC-HH
Confidence 467789999999999999999999998864 22 388888776553 44 499888866666543 222 22
Q ss_pred hhhhchH-HHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChh--
Q psy14014 87 YVHCLLP-PLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAG-- 163 (615)
Q Consensus 87 ~~~~l~~-~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~-- 163 (615)
..+.+.. +|......+.+.||.+-++++..+++..-++ -++.+++++....++++...|.+|..++..+...++..
T Consensus 76 ~~~siks~lL~~~~~E~~~~vr~k~~dviAeia~~~l~e-~WPell~~L~q~~~S~~~~~rE~al~il~s~~~~~~~~~~ 154 (1075)
T KOG2171|consen 76 VQQSIKSSLLEIIQSETEPSVRHKLADVIAEIARNDLPE-KWPELLQFLFQSTKSPNPSLRESALLILSSLPETFGNTLQ 154 (1075)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHhcccc-chHHHHHHHHHHhcCCCcchhHHHHHHHHhhhhhhccccc
Confidence 2223322 4555667889999999999999999998777 78899999999999999999999999998888777654
Q ss_pred -hHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhch--hh--hHhhhHH----HHHHhhccCchhHHHHHHHHHHHHH
Q psy14014 164 -VKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEV--DY--LKTDIIP----MFVNLAQDEQDSVRLLAVEACVSIA 234 (615)
Q Consensus 164 -~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~--~~--~~~~ll~----~l~~~~~d~~~~vr~~a~~~l~~l~ 234 (615)
....+.+.|.+.++|++..||-.++++++.++...+. .. ....++| .+...+++++...-..+++++..++
T Consensus 155 ~~~~~l~~lf~q~~~d~s~~vr~~a~rA~~a~~~~~~~~~~~~~~~~~llP~~l~vl~~~i~~~d~~~a~~~l~~l~El~ 234 (1075)
T KOG2171|consen 155 PHLDDLLRLFSQTMTDPSSPVRVAAVRALGAFAEYLENNKSEVDKFRDLLPSLLNVLQEVIQDGDDDAAKSALEALIELL 234 (1075)
T ss_pred hhHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHhccchHHHHHHHHHhHHHHHHhHhhhhccchHHHHHHHHHHHHHH
Confidence 4458889999999998888999999999999998852 11 1223444 4445566777778888999999998
Q ss_pred hhcCh--hhHHHhHHHHHHHhcCCC--ChHHHHHHHHHHHHHHHHhCcc-----chhhhHHHHHHHhhcCC---------
Q psy14014 235 SLLSQ--SDVEQLVMPTLRQCSGDT--SWRVRYMVADKFTDLQKAVGPE-----ITKTDLVQAFQMLLKDS--------- 296 (615)
Q Consensus 235 ~~~~~--~~~~~~l~~~l~~~~~d~--~~~vR~~~~~~l~~l~~~~~~~-----~~~~~l~~~l~~~l~d~--------- 296 (615)
+..++ ......++....+...+. +..+|..+++.+..+++..+.. .....+++.+..++.|.
T Consensus 235 e~~pk~l~~~l~~ii~~~l~Ia~n~~l~~~~R~~ALe~ivs~~e~Ap~~~k~~~~~~~~lv~~~l~~mte~~~D~ew~~~ 314 (1075)
T KOG2171|consen 235 ESEPKLLRPHLSQIIQFSLEIAKNKELENSIRHLALEFLVSLSEYAPAMCKKLALLGHTLVPVLLAMMTEEEDDDEWSNE 314 (1075)
T ss_pred hhchHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHhhHHHhhhchhhhccHHHHHHHhcCCcccchhhccc
Confidence 88776 233444566666666554 5779999999988887762211 12345677776665321
Q ss_pred -------cHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcc--hhhhhhh
Q psy14014 297 -------EAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGK--HNTVDHL 367 (615)
Q Consensus 297 -------~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~--~~~~~~l 367 (615)
+..-...|.++++.++..+++. .+.+.+++++..++++++|+-|.+++.+|+.+++..++ ....+++
T Consensus 315 d~~ded~~~~~~~~A~~~lDrlA~~L~g~----~v~p~~~~~l~~~l~S~~w~~R~AaL~Als~i~EGc~~~m~~~l~~I 390 (1075)
T KOG2171|consen 315 DDLDEDDEETPYRAAEQALDRLALHLGGK----QVLPPLFEALEAMLQSTEWKERHAALLALSVIAEGCSDVMIGNLPKI 390 (1075)
T ss_pred cccccccccCcHHHHHHHHHHHHhcCChh----hehHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 1124567899999999998876 46788999999999999999999999999999987664 3346789
Q ss_pred HHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhc-CCchHHH
Q psy14014 368 LPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAED-SKWRVRL 446 (615)
Q Consensus 368 ~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~-~~~~vr~ 446 (615)
+|.+++.++|+++.||.+|+.+++++...+.+.--.... +.+| |.+...+.+ .+.+|..
T Consensus 391 l~~Vl~~l~DphprVr~AA~naigQ~stdl~p~iqk~~~---e~l~-----------------~aL~~~ld~~~~~rV~a 450 (1075)
T KOG2171|consen 391 LPIVLNGLNDPHPRVRYAALNAIGQMSTDLQPEIQKKHH---ERLP-----------------PALIALLDSTQNVRVQA 450 (1075)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHhhhhhhcHHHHHHHH---Hhcc-----------------HHHHHHhcccCchHHHH
Confidence 999999999999999999999999987766543211111 1121 455555555 4778998
Q ss_pred HHHHHhHHHHhhhChHh---HHHHHHH-HHHHhcCCcchHHHHHHHHHHHHHHHHhChHH--hhhchhHHHHhhhcCC--
Q psy14014 447 AIIEYMPLLAGQLGVEF---FDEKLNA-LCMTWLVDHVYAIREAATLNLKKLVEQFGSEW--AQSTVIPKVVAMSRDQ-- 518 (615)
Q Consensus 447 ~~~~~l~~l~~~~~~~~---~~~~l~~-~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~--~~~~i~~~l~~~~~d~-- 518 (615)
.++.++-.+.....++. |.+.++. .+.-+++.+...||+.++.+++.++...+..+ +.+.++|.|.+.+...
T Consensus 451 hAa~al~nf~E~~~~~~l~pYLd~lm~~~l~~L~~~~~~~v~e~vvtaIasvA~AA~~~F~pY~d~~Mp~L~~~L~n~~~ 530 (1075)
T KOG2171|consen 451 HAAAALVNFSEECDKSILEPYLDGLMEKKLLLLLQSSKPYVQEQAVTAIASVADAAQEKFIPYFDRLMPLLKNFLQNADD 530 (1075)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHHHHHHhCCCc
Confidence 88888888876665543 4455665 33445567788999999999999999887764 4467899998876544
Q ss_pred --CchHHHHHHHHHHHHHhhhChhhHHH---hhHHHHHhh---CCCCCchHHHHHHHHHHHHhHhhhhh---hHHhhHHH
Q psy14014 519 --NYLHRMTCLFCINVLAEACGPTVTAN---FLLPTVLNM---AGDNVANVRFNVAKTLQKIGPILETN---VIQSQVKP 587 (615)
Q Consensus 519 --~~~~R~~a~~~l~~l~~~~~~~~~~~---~i~~~l~~~---~~D~~~~vr~~a~~~l~~l~~~~~~~---~~~~~~~~ 587 (615)
....|-.+..|++-++...|.+.|.+ .++..+..+ ..|.+...|......++++++.++++ +....+.|
T Consensus 531 ~d~r~LrgktmEcisli~~AVGke~F~~~a~eliqll~~~~~~~~~~dd~~~sy~~~~warmc~ilg~~F~p~L~~Vmpp 610 (1075)
T KOG2171|consen 531 KDLRELRGKTMECLSLIARAVGKEKFLPLAEELIQLLLELQGSDQDDDDPLRSYMIAFWARMCRILGDDFAPFLPVVMPP 610 (1075)
T ss_pred hhhHHHHhhHHHHHHHHHHHhhhhhhhHhHHHHHHHHHhhcccchhhccccHHHHHHHHHHHHHHhchhhHhHHHHHhHH
Confidence 45678888999999999999877754 456666665 45677788999999999999998854 33344555
Q ss_pred HHhhhcCCCC
Q psy14014 588 ALDKLNGDTD 597 (615)
Q Consensus 588 ~l~~l~~d~d 597 (615)
+++....+++
T Consensus 611 l~~ta~~~p~ 620 (1075)
T KOG2171|consen 611 LLKTARLDPD 620 (1075)
T ss_pred HHHhhccCCc
Confidence 5555544433
No 6
>KOG0213|consensus
Probab=99.97 E-value=7.2e-26 Score=221.29 Aligned_cols=560 Identities=16% Similarity=0.190 Sum_probs=407.8
Q ss_pred HHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcH--HHHHHHHHHhccccCCCCC--cchhhh
Q psy14014 15 IAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDED--EVLLALAEQLGTFTPNVGG--PEYVHC 90 (615)
Q Consensus 15 i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~--~vr~~a~~~l~~l~~~~~~--~~~~~~ 90 (615)
|..+-..+.|.|..+|....+.++.++.++|-+ +++|||...+.+.. .-|+..+++..+++...|. -.|+..
T Consensus 478 istmrpDidn~deYVRnttarafavvasalgip----~llpfLkavc~SkkSwqaRhTgIkivqqIail~Gcsvlphl~~ 553 (1172)
T KOG0213|consen 478 ISTMRPDIDNKDEYVRNTTARAFAVVASALGIP----ALLPFLKAVCGSKKSWQARHTGIKIVQQIAILSGCSVLPHLKP 553 (1172)
T ss_pred HHhhcCCcccccHHHHHHHHHHHHHHHHHhCcH----HHHHHHHHHhccccchhhhchhhHHHHHHHHHhcchhhhhhHH
Confidence 344445677899999999999999999999866 89999999988753 4677777666666654443 567888
Q ss_pred chHHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHh---hhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChh----
Q psy14014 91 LLPPLESLATVEETVVRDKAVESLRLISAQHSPHDLE---AHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAG---- 163 (615)
Q Consensus 91 l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~---~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~---- 163 (615)
++.++..++.|++..||..++.++..+++...+-.++ ..+-|+.......... .-.+-.+.++.+++...+.
T Consensus 554 lv~ii~~gl~De~qkVR~itAlalsalaeaa~Pygie~fDsVlkpLwkgir~hrgk-~laafLkAigyliplmd~eya~y 632 (1172)
T KOG0213|consen 554 LVKIIEHGLKDEQQKVRTITALALSALAEAATPYGIEQFDSVLKPLWKGIRQHRGK-ELAAFLKAIGYLIPLMDAEYASY 632 (1172)
T ss_pred HHHHHHHhhcccchhhhhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHccCh-HHHHHHHHHhhccccccHHHHHH
Confidence 9999999999999999999999999999998875443 3455655444332110 1112235667777766543
Q ss_pred hHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhch--hhhHhhhHHHHHHh---------------------------
Q psy14014 164 VKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEV--DYLKTDIIPMFVNL--------------------------- 214 (615)
Q Consensus 164 ~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~--~~~~~~ll~~l~~~--------------------------- 214 (615)
...+++-.+.+-.+.++.++++.++..+...|...+- .....+++|.|...
T Consensus 633 yTrevmlil~rEf~sPDeemkkivLKVv~qcc~t~Gv~~~y~r~dilp~ff~~fw~rrmA~drr~ykqlv~ttv~ia~Kv 712 (1172)
T KOG0213|consen 633 YTREVMLILIREFGSPDEEMKKIVLKVVKQCCATDGVEPAYIRFDILPEFFFSFWGRRMALDRRNYKQLVDTTVEIAAKV 712 (1172)
T ss_pred hHHHHHHHHHHhhCCChHHHHHHHHHHHHHHhcccCCCHHHHhhhhhHHHHhhhhhhhhhccccchhhHHHHHHHHHHHh
Confidence 3456667777777889999999999988888765443 23334455544332
Q ss_pred ------------hccCchhHHHHHHHHHHHHHhhcChhhH----HHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCc
Q psy14014 215 ------------AQDEQDSVRLLAVEACVSIASLLSQSDV----EQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGP 278 (615)
Q Consensus 215 ------------~~d~~~~vr~~a~~~l~~l~~~~~~~~~----~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~ 278 (615)
++|+.+..|+...++...+...+|...+ ...++.-++..+........ .....|+.+...+|.
T Consensus 713 G~~~~v~R~v~~lkde~e~yrkm~~etv~ri~~~lg~~diderleE~lidgil~Afqeqtt~d~-vml~gfg~V~~~lg~ 791 (1172)
T KOG0213|consen 713 GSDPIVSRVVLDLKDEPEQYRKMVAETVSRIVGRLGAADIDERLEERLIDGILYAFQEQTTEDS-VMLLGFGTVVNALGG 791 (1172)
T ss_pred CchHHHHHHhhhhccccHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHhcccchh-hhhhhHHHHHHHHhh
Confidence 2455666777777777776666664322 22334444433333222222 334567777777765
Q ss_pred --cchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhch
Q psy14014 279 --EITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSP 356 (615)
Q Consensus 279 --~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~ 356 (615)
+.....++...+..++++.+.||+.|+..++.++..+.. +.++..+..+-..|.+.+....+.|-.+++.++..+..
T Consensus 792 r~kpylpqi~stiL~rLnnksa~vRqqaadlis~la~Vlkt-c~ee~~m~~lGvvLyEylgeeypEvLgsILgAikaI~n 870 (1172)
T KOG0213|consen 792 RVKPYLPQICSTILWRLNNKSAKVRQQAADLISSLAKVLKT-CGEEKLMGHLGVVLYEYLGEEYPEVLGSILGAIKAIVN 870 (1172)
T ss_pred ccccchHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHh-ccHHHHHHHhhHHHHHhcCcccHHHHHHHHHHHHHHHH
Confidence 344568888899999999999999999999888876532 22224455566677888999999999999999999999
Q ss_pred hhcchhh---hhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhh----hchhHHHHHHHHHhhhhhhhhccccchhhhhhh
Q psy14014 357 ILGKHNT---VDHLLPLFLSQLKDECPEVRLNIISNLDCVNEV----IGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLN 429 (615)
Q Consensus 357 ~~g~~~~---~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~----~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~ 429 (615)
+.|-... ...++|.+...|++.+..|+.+++..++.++.. ++..+|..-+
T Consensus 871 vigm~km~pPi~dllPrltPILknrheKVqen~IdLvg~IadrgpE~v~aREWMRIc----------------------- 927 (1172)
T KOG0213|consen 871 VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGTIADRGPEYVSAREWMRIC----------------------- 927 (1172)
T ss_pred hccccccCCChhhhcccchHhhhhhHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHH-----------------------
Confidence 8886433 457899999999999999999999999888643 3445554322
Q ss_pred hHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhH
Q psy14014 430 ALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIP 509 (615)
Q Consensus 430 ~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~ 509 (615)
-.+.++++..+-.+|.++.+.++.|++..|+.. ++..+++.|.-.....|.+...+++.+++.+|+= .++|
T Consensus 928 -feLlelLkahkK~iRRaa~nTfG~IakaIGPqd----VLatLlnnLkvqeRq~RvcTtvaIaIVaE~c~pF----tVLP 998 (1172)
T KOG0213|consen 928 -FELLELLKAHKKEIRRAAVNTFGYIAKAIGPQD----VLATLLNNLKVQERQNRVCTTVAIAIVAETCGPF----TVLP 998 (1172)
T ss_pred -HHHHHHHHHHHHHHHHHHHhhhhHHHHhcCHHH----HHHHHHhcchHHHHHhchhhhhhhhhhhhhcCch----hhhH
Confidence 134566666777899999999999999999964 6667788888888899999999999999998862 6899
Q ss_pred HHHhhhcCCCchHHHHHHHHHHHHHhhhCh--hhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHH
Q psy14014 510 KVVAMSRDQNYLHRMTCLFCINVLAEACGP--TVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKP 587 (615)
Q Consensus 510 ~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~--~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~ 587 (615)
.|.+-+..++.+|....++++..+.+..|. ..+...+.|.|...+.|.|..-|+.++.++..+.-......-.+.+..
T Consensus 999 almneYrtPe~nVQnGVLkalsf~FeyigemskdYiyav~PlleDAlmDrD~vhRqta~~~I~Hl~Lg~~g~g~eda~iH 1078 (1172)
T KOG0213|consen 999 ALMNEYRTPEANVQNGVLKALSFMFEYIGEMSKDYIYAVTPLLEDALMDRDLVHRQTAMNVIKHLALGVPGTGCEDALIH 1078 (1172)
T ss_pred HHHhhccCchhHHHHhHHHHHHHHHHHHHHHhhhHHHHhhHHHHHhhccccHHHHHHHHHHHHHHhcCCCCcCcHHHHHH
Confidence 999999999999999999999999998876 335567999999999999999999999999998744321111222333
Q ss_pred HHhhh---cCCCCccHHHHHHHHHHHHhh
Q psy14014 588 ALDKL---NGDTDVDVKYFAQEAISSIAD 613 (615)
Q Consensus 588 ~l~~l---~~d~d~~v~~~a~~a~~~~~~ 613 (615)
++.-+ .-+.-+.|.+.-.++++.+.-
T Consensus 1079 LLN~iWpNIle~sPhviqa~~e~~eg~r~ 1107 (1172)
T KOG0213|consen 1079 LLNLIWPNILETSPHVIQAFDEAMEGLRV 1107 (1172)
T ss_pred HHHHhhhhhcCCChHHHHHHHHHHHHHHH
Confidence 33333 356777888777777766543
No 7
>KOG2023|consensus
Probab=99.96 E-value=4.6e-26 Score=220.45 Aligned_cols=589 Identities=17% Similarity=0.194 Sum_probs=412.1
Q ss_pred HHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcH-HHHHHHHHHhccccCCCC---C----cchh
Q psy14014 17 VLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDED-EVLLALAEQLGTFTPNVG---G----PEYV 88 (615)
Q Consensus 17 ~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~-~vr~~a~~~l~~l~~~~~---~----~~~~ 88 (615)
..+..+.+.++-+|......+..++...|-. .|++++|.|.++++.++ .....+..+|.++.+-.. + ....
T Consensus 94 ~~l~~lgd~~~lIr~tvGivITTI~s~~~~~-~wpelLp~L~~~L~s~d~n~~EgA~~AL~KIcEDsa~~lds~~~~rpl 172 (885)
T KOG2023|consen 94 ECLHGLGDASPLIRATVGIVITTIASTGGLQ-HWPELLPQLCELLDSPDYNTCEGAFGALQKICEDSAQFLDSDVLTRPL 172 (885)
T ss_pred HHHhhccCchHHHHhhhhheeeeeecccccc-cchhHHHHHHHHhcCCcccccchhHHHHHHHHhhhHHHHhhhcccCch
Confidence 3456677778888888887777777655555 78999999999998877 477777777777765211 1 2456
Q ss_pred hhchHHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHH--hhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhh--
Q psy14014 89 HCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDL--EAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGV-- 164 (615)
Q Consensus 89 ~~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~--~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~-- 164 (615)
..++|-+.++..++.+.+|..|+.++..+.-.-+.... ...++..+..+++|++..+|+..+..+..+.+...+..
T Consensus 173 ~~mipkfl~f~~h~spkiRs~A~~cvNq~i~~~~qal~~~iD~Fle~lFalanD~~~eVRk~vC~alv~Llevr~dkl~p 252 (885)
T KOG2023|consen 173 NIMIPKFLQFFKHPSPKIRSHAVGCVNQFIIIQTQALYVHIDKFLEILFALANDEDPEVRKNVCRALVFLLEVRPDKLVP 252 (885)
T ss_pred HHhHHHHHHHHhCCChhHHHHHHhhhhheeecCcHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhcHHhccc
Confidence 77899999999999999999999999887665554322 23477778889999999999999988888777665543
Q ss_pred -HHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHh-ch---hhhHhhhHHHHHHh----------hc-------------
Q psy14014 165 -KAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVV-EV---DYLKTDIIPMFVNL----------AQ------------- 216 (615)
Q Consensus 165 -~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~-~~---~~~~~~ll~~l~~~----------~~------------- 216 (615)
...+++++++..+|.+.+|.-.||+....++..- .+ ..+..+++|++.+- ++
T Consensus 253 hl~~IveyML~~tqd~dE~VALEACEFwla~aeqpi~~~~L~p~l~kliPvLl~~M~Ysd~D~~LL~~~eeD~~vpDree 332 (885)
T KOG2023|consen 253 HLDNIVEYMLQRTQDVDENVALEACEFWLALAEQPICKEVLQPYLDKLIPVLLSGMVYSDDDIILLKNNEEDESVPDREE 332 (885)
T ss_pred chHHHHHHHHHHccCcchhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHccCccccccHHHhcCccccccCCchhh
Confidence 4668889999999999999999999999988642 11 23455677776552 22
Q ss_pred -----------------------c----------CchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHH
Q psy14014 217 -----------------------D----------EQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRY 263 (615)
Q Consensus 217 -----------------------d----------~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~ 263 (615)
| .+|..|+.+..++..++..++.+ ..+.++|.+.+.+..+.|.+|+
T Consensus 333 DIkPRfhksk~~~~~~~~~~eDdddDe~DDdD~~~dWNLRkCSAAaLDVLanvf~~e-lL~~l~PlLk~~L~~~~W~vrE 411 (885)
T KOG2023|consen 333 DIKPRFHKSKEHGNGEDADDEDDDDDEDDDDDAFSDWNLRKCSAAALDVLANVFGDE-LLPILLPLLKEHLSSEEWKVRE 411 (885)
T ss_pred hccchhhhchhccCccccccccccccccccccccccccHhhccHHHHHHHHHhhHHH-HHHHHHHHHHHHcCcchhhhhh
Confidence 0 12789999999999999888876 5888999999999999999999
Q ss_pred HHHHHHHHHHHHhCccc--hhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCH
Q psy14014 264 MVADKFTDLQKAVGPEI--TKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQ 341 (615)
Q Consensus 264 ~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~ 341 (615)
+.+-++|.+++..-.-+ ..++++|.++.++.|+.+-||.-.+..|.++..+...+.+. .+...++.-+.+.+-|.+.
T Consensus 412 agvLAlGAIAEGcM~g~~p~LpeLip~l~~~L~DKkplVRsITCWTLsRys~wv~~~~~~-~~f~pvL~~ll~~llD~NK 490 (885)
T KOG2023|consen 412 AGVLALGAIAEGCMQGFVPHLPELIPFLLSLLDDKKPLVRSITCWTLSRYSKWVVQDSRD-EYFKPVLEGLLRRLLDSNK 490 (885)
T ss_pred hhHHHHHHHHHHHhhhcccchHHHHHHHHHHhccCccceeeeeeeeHhhhhhhHhcCChH-hhhHHHHHHHHHHHhcccH
Confidence 99999999998653332 34579999999999999999999999999999987666543 3444455555666778999
Q ss_pred HHHHHHHHHHHhhchhhcchh--hhhhhHHHHHHhh---cCCChhHHHHHHHhhhHhhh-hhchh------------HHH
Q psy14014 342 HVKSALASVIMGLSPILGKHN--TVDHLLPLFLSQL---KDECPEVRLNIISNLDCVNE-VIGIQ------------QWR 403 (615)
Q Consensus 342 ~vR~~~~~~l~~l~~~~g~~~--~~~~l~p~l~~~l---~d~~~~vr~~a~~~l~~l~~-~~~~~------------~~~ 403 (615)
+|+.++|.++..+-+-.|.+. +.++++..+...+ +.+|--+...|+.+|..-+. ..... .|.
T Consensus 491 ~VQEAAcsAfAtleE~A~~eLVp~l~~IL~~l~~af~kYQ~KNLlILYDAIgtlAdsvg~~Ln~~~YiqiLmPPLi~KW~ 570 (885)
T KOG2023|consen 491 KVQEAACSAFATLEEEAGEELVPYLEYILDQLVFAFGKYQKKNLLILYDAIGTLADSVGHALNKPAYIQILMPPLIEKWE 570 (885)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhcceehHHHHHHHHHHHHHHhcCcHHHHHHhccHHHHHHH
Confidence 999999999998887766532 2223333333222 33455566667666654331 11111 222
Q ss_pred H------HH-HHHhhhhhhhhccccchhh-------hhhh--hHHHHHhh---hcC-----CchHHHHHHHHhHHHHhhh
Q psy14014 404 V------RL-AIIEYMPLLAGQLGVEFFD-------EKLN--ALSIVELA---EDS-----KWRVRLAIIEYMPLLAGQL 459 (615)
Q Consensus 404 ~------~~-~i~~~l~~l~~~~~~~~~~-------~~l~--~~~i~~~~---~~~-----~~~vr~~~~~~l~~l~~~~ 459 (615)
. .+ -..+++..++..+|..|.+ ..+. ........ .++ +-..--.+++.+.-+++.+
T Consensus 571 ~lsd~DKdLfPLLEClSsia~AL~~gF~P~~~~Vy~Rc~~il~~t~q~~~~~~~~~~~~~pdkdfiI~sLDL~SGLaegL 650 (885)
T KOG2023|consen 571 LLSDSDKDLFPLLECLSSIASALGVGFLPYAQPVYQRCFRILQKTLQLLAKVQQDPTVEAPDKDFIIVSLDLLSGLAEGL 650 (885)
T ss_pred hcCcccchHHHHHHHHHHHHHHHhccccccCHHHHHHHHHHHHHHHHHHHhccCCccccCCCcceEEEeHHHHhHHHHHh
Confidence 1 00 1234455556677765532 1110 00111111 111 1111224677777788877
Q ss_pred ChHh----HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHH--hhhchhHHHHhhhcCCCchHHHHHHHHHHHH
Q psy14014 460 GVEF----FDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEW--AQSTVIPKVVAMSRDQNYLHRMTCLFCINVL 533 (615)
Q Consensus 460 ~~~~----~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~--~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l 533 (615)
|... +.+.+..++.+.+.|+.++||..+...+|.+.+.+.+.. ....++|.+..-+.-.+-.+-.+|++++|.+
T Consensus 651 g~~ie~Lva~snl~~lll~C~~D~~peVRQS~FALLGDltk~c~~~v~p~~~~fl~~lg~Nl~~~~isv~nNA~WAiGei 730 (885)
T KOG2023|consen 651 GSHIEPLVAQSNLLDLLLQCLQDEVPEVRQSAFALLGDLTKACFEHVIPNLADFLPILGANLNPENISVCNNAIWAIGEI 730 (885)
T ss_pred hhchHHHhhhccHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHhhcCChhhchHHHHHHHHHHHH
Confidence 7643 346788999999999999999999999999999874321 1233555555444555667889999999999
Q ss_pred HhhhChhhHHHhhHHHHHhhC-----CCCCchHHHHHHHHHHHHhHhhh---hhhHHhhHHHHHhhhcCCCCccHHHHHH
Q psy14014 534 AEACGPTVTANFLLPTVLNMA-----GDNVANVRFNVAKTLQKIGPILE---TNVIQSQVKPALDKLNGDTDVDVKYFAQ 605 (615)
Q Consensus 534 ~~~~~~~~~~~~i~~~l~~~~-----~D~~~~vr~~a~~~l~~l~~~~~---~~~~~~~~~~~l~~l~~d~d~~v~~~a~ 605 (615)
+...|.+. .+++.|.+..+. ......+-.+.+-+++++.-..+ ++.....+.|-+..+.+=.|.+-++.|.
T Consensus 731 a~k~g~~~-~~~v~~vl~~L~~iin~~~~~~tllENtAITIGrLg~~~Pe~vAp~l~~f~~pWc~sl~~i~DneEK~sAF 809 (885)
T KOG2023|consen 731 ALKMGLKM-KQYVSPVLEDLITIINRQNTPKTLLENTAITIGRLGYICPEEVAPHLDSFMRPWCTSLRNIDDNEEKESAF 809 (885)
T ss_pred HHHhchhh-hhHHHHHHHHHHHHhcccCchHHHHHhhhhhhhhhhccCHHhcchhHHHHHHHHHHHhcccccchhHHHHH
Confidence 99988764 244445544442 23445788888999998876654 3455666788888787666777777776
Q ss_pred HHHH
Q psy14014 606 EAIS 609 (615)
Q Consensus 606 ~a~~ 609 (615)
-++=
T Consensus 810 rG~c 813 (885)
T KOG2023|consen 810 RGLC 813 (885)
T ss_pred HHHH
Confidence 6553
No 8
>KOG0213|consensus
Probab=99.96 E-value=1.3e-25 Score=219.59 Aligned_cols=557 Identities=19% Similarity=0.269 Sum_probs=363.0
Q ss_pred chHHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhh-hcCCcH-H-HHHHHHHHhccccCCCCCcchhh
Q psy14014 13 YPIAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTE-TIYDED-E-VLLALAEQLGTFTPNVGGPEYVH 89 (615)
Q Consensus 13 ~~i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~-~~~~~~-~-vr~~a~~~l~~l~~~~~~~~~~~ 89 (615)
..|..+|-.+++..+..|..+++.|..-+..+|.....++++|++.. .++|+. . +-+.+-..|-++.... -.|++
T Consensus 363 r~i~~llLkvKNG~ppmRk~~LR~ltdkar~~ga~~lfnqiLpllMs~tLeDqerhllVkvidriLyklDdlv--rpYVh 440 (1172)
T KOG0213|consen 363 RKIMRLLLKVKNGTPPMRKSALRILTDKARNFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLV--RPYVH 440 (1172)
T ss_pred HHHHHHHHhhcCCCchhHHHHHHHHHHHHHhhccHHHHHHHHHHHcCccccchhhhhHHHHHHHHHHhhcccc--hhcee
Confidence 46899999999999999999999999999999999899999999876 467766 3 4444444554444321 12333
Q ss_pred hchHHHhhhhcC-----------------------------------chhHHHHHHHHHHHHHHhhcChhHHhhhHHHHH
Q psy14014 90 CLLPPLESLATV-----------------------------------EETVVRDKAVESLRLISAQHSPHDLEAHFVPLV 134 (615)
Q Consensus 90 ~l~~~l~~l~~~-----------------------------------~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l 134 (615)
.++-.+..++-| .++.||.....++..+++.++- +.++|++
T Consensus 441 kILvViepllided~yar~egreIisnLakaaGla~mistmrpDidn~deYVRnttarafavvasalgi----p~llpfL 516 (1172)
T KOG0213|consen 441 KILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNKDEYVRNTTARAFAVVASALGI----PALLPFL 516 (1172)
T ss_pred eeEEEeecceecchHHHhhchHHHHHHHHHHhhhHHHHHhhcCCcccccHHHHHHHHHHHHHHHHHhCc----HHHHHHH
Confidence 333333333333 3455666666666666555543 3577888
Q ss_pred HHhhcCC-CcchhhhHHhhhhhhccCCChhh---HHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhch---hhhHhhh
Q psy14014 135 QRLASGD-WFTSRTSACGLFSVCYPRVTAGV---KAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEV---DYLKTDI 207 (615)
Q Consensus 135 ~~l~~~~-~~~~r~~a~~~l~~~~~~~~~~~---~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~---~~~~~~l 207 (615)
...+++. ++..|..++++...++...+-.. ...++..+..++.|....||-.++.++..+++..++ +.+..-+
T Consensus 517 kavc~SkkSwqaRhTgIkivqqIail~Gcsvlphl~~lv~ii~~gl~De~qkVR~itAlalsalaeaa~Pygie~fDsVl 596 (1172)
T KOG0213|consen 517 KAVCGSKKSWQARHTGIKIVQQIAILSGCSVLPHLKPLVKIIEHGLKDEQQKVRTITALALSALAEAATPYGIEQFDSVL 596 (1172)
T ss_pred HHHhccccchhhhchhhHHHHHHHHHhcchhhhhhHHHHHHHHHhhcccchhhhhHHHHHHHHHHHhcCCcchHHHHHHH
Confidence 8888875 77788888887777766665443 344556667778888888888888888888888765 2111111
Q ss_pred HHHHHHh-----------------------------------------hccCchhHHHHHHHHHHHHHhhcChhh--HHH
Q psy14014 208 IPMFVNL-----------------------------------------AQDEQDSVRLLAVEACVSIASLLSQSD--VEQ 244 (615)
Q Consensus 208 l~~l~~~-----------------------------------------~~d~~~~vr~~a~~~l~~l~~~~~~~~--~~~ 244 (615)
-|+.... ...++++.++..+..+..++..-|-+. +..
T Consensus 597 kpLwkgir~hrgk~laafLkAigyliplmd~eya~yyTrevmlil~rEf~sPDeemkkivLKVv~qcc~t~Gv~~~y~r~ 676 (1172)
T KOG0213|consen 597 KPLWKGIRQHRGKELAAFLKAIGYLIPLMDAEYASYYTREVMLILIREFGSPDEEMKKIVLKVVKQCCATDGVEPAYIRF 676 (1172)
T ss_pred HHHHHHHHHccChHHHHHHHHHhhccccccHHHHHHhHHHHHHHHHHhhCCChHHHHHHHHHHHHHHhcccCCCHHHHhh
Confidence 1111111 112233344444444444443333210 011
Q ss_pred hHHHHHHHhcCCCChHHHHHHH---------HHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhc
Q psy14014 245 LVMPTLRQCSGDTSWRVRYMVA---------DKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNL 315 (615)
Q Consensus 245 ~l~~~l~~~~~d~~~~vR~~~~---------~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~ 315 (615)
.++|.+... +..|+.+. .+-..++..+|. ..++.-...-++|+.+.-|...+.....+...+
T Consensus 677 dilp~ff~~-----fw~rrmA~drr~ykqlv~ttv~ia~KvG~----~~~v~R~v~~lkde~e~yrkm~~etv~ri~~~l 747 (1172)
T KOG0213|consen 677 DILPEFFFS-----FWGRRMALDRRNYKQLVDTTVEIAAKVGS----DPIVSRVVLDLKDEPEQYRKMVAETVSRIVGRL 747 (1172)
T ss_pred hhhHHHHhh-----hhhhhhhccccchhhHHHHHHHHHHHhCc----hHHHHHHhhhhccccHHHHHHHHHHHHHHHhcc
Confidence 111111100 00111111 111122222221 122222222334444444444444444444433
Q ss_pred cccch----------------------------------------hHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhc
Q psy14014 316 DAYNQ----------------------------------------ENIIMTYILPYVKDLVADPNQHVKSALASVIMGLS 355 (615)
Q Consensus 316 ~~~~~----------------------------------------~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~ 355 (615)
+.... .+.+++.+...+...++++++.||+.++..++.++
T Consensus 748 g~~diderleE~lidgil~Afqeqtt~d~vml~gfg~V~~~lg~r~kpylpqi~stiL~rLnnksa~vRqqaadlis~la 827 (1172)
T KOG0213|consen 748 GAADIDERLEERLIDGILYAFQEQTTEDSVMLLGFGTVVNALGGRVKPYLPQICSTILWRLNNKSAKVRQQAADLISSLA 827 (1172)
T ss_pred ccccccHHHHHHHHHHHHHHHHhcccchhhhhhhHHHHHHHHhhccccchHHHHHHHHHHhcCCChhHHHHHHHHHHHHH
Confidence 32110 01234555555667789999999999999999888
Q ss_pred hhh---cchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHH
Q psy14014 356 PIL---GKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALS 432 (615)
Q Consensus 356 ~~~---g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~ 432 (615)
.++ |.+....++--.+.+.+..+.++|.-..+.++.++....|...+... |-+.+ |.
T Consensus 828 ~Vlktc~ee~~m~~lGvvLyEylgeeypEvLgsILgAikaI~nvigm~km~pP--i~dll------------------Pr 887 (1172)
T KOG0213|consen 828 KVLKTCGEEKLMGHLGVVLYEYLGEEYPEVLGSILGAIKAIVNVIGMTKMTPP--IKDLL------------------PR 887 (1172)
T ss_pred HHHHhccHHHHHHHhhHHHHHhcCcccHHHHHHHHHHHHHHHHhccccccCCC--hhhhc------------------cc
Confidence 765 34455556666677888888999998888888888877765433211 11223 55
Q ss_pred HHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHH---HhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhH
Q psy14014 433 IVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCM---TWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIP 509 (615)
Q Consensus 433 i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~---~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~ 509 (615)
+.-.+++...+|....+..++.|+..-....-....+.+++ .+|...+.++|.+|..++|-+++.+|+. .++.
T Consensus 888 ltPILknrheKVqen~IdLvg~IadrgpE~v~aREWMRIcfeLlelLkahkK~iRRaa~nTfG~IakaIGPq----dVLa 963 (1172)
T KOG0213|consen 888 LTPILKNRHEKVQENCIDLVGTIADRGPEYVSAREWMRICFELLELLKAHKKEIRRAAVNTFGYIAKAIGPQ----DVLA 963 (1172)
T ss_pred chHhhhhhHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhcCHH----HHHH
Confidence 66667788888999999999999875433222233444444 4567788999999999999999999975 6889
Q ss_pred HHHhhhcCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhh--hhhHHhhHHH
Q psy14014 510 KVVAMSRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILE--TNVIQSQVKP 587 (615)
Q Consensus 510 ~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~--~~~~~~~~~~ 587 (615)
+|++.++..+...|..+.-+++.+++.|++= .++|.|.+=..-+..+|+..+.++++.+++..+ ...+...+.|
T Consensus 964 tLlnnLkvqeRq~RvcTtvaIaIVaE~c~pF----tVLPalmneYrtPe~nVQnGVLkalsf~FeyigemskdYiyav~P 1039 (1172)
T KOG0213|consen 964 TLLNNLKVQERQNRVCTTVAIAIVAETCGPF----TVLPALMNEYRTPEANVQNGVLKALSFMFEYIGEMSKDYIYAVTP 1039 (1172)
T ss_pred HHHhcchHHHHHhchhhhhhhhhhhhhcCch----hhhHHHHhhccCchhHHHHhHHHHHHHHHHHHHHHhhhHHHHhhH
Confidence 9999999999999999999999999999863 378888877788999999999999999999887 3566788999
Q ss_pred HHhhhcCCCCccHHHHHHHHHHHHh
Q psy14014 588 ALDKLNGDTDVDVKYFAQEAISSIA 612 (615)
Q Consensus 588 ~l~~l~~d~d~~v~~~a~~a~~~~~ 612 (615)
++...+.|.|...|+-|..+++-++
T Consensus 1040 lleDAlmDrD~vhRqta~~~I~Hl~ 1064 (1172)
T KOG0213|consen 1040 LLEDALMDRDLVHRQTAMNVIKHLA 1064 (1172)
T ss_pred HHHHhhccccHHHHHHHHHHHHHHh
Confidence 9999999999999999999988665
No 9
>KOG1241|consensus
Probab=99.95 E-value=3.7e-23 Score=203.90 Aligned_cols=578 Identities=14% Similarity=0.119 Sum_probs=416.6
Q ss_pred HHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcH-H-HHHHHHHHhccccCCCCCc---chhhhch
Q psy14014 18 LIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDED-E-VLLALAEQLGTFTPNVGGP---EYVHCLL 92 (615)
Q Consensus 18 ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~-~-vr~~a~~~l~~l~~~~~~~---~~~~~l~ 92 (615)
.+..|.++.|..+..|.+.++.++..--|...|+++++.+.....++. . ++....+.+|.+.+.+..+ +..+.++
T Consensus 95 il~tL~~~ep~~~s~Aaq~va~IA~~ElP~n~wp~li~~lv~nv~~~~~~~~k~~slealGyice~i~pevl~~~sN~iL 174 (859)
T KOG1241|consen 95 ILRTLGSPEPRRPSSAAQCVAAIACIELPQNQWPELIVTLVSNVGEEQASMVKESSLEALGYICEDIDPEVLEQQSNDIL 174 (859)
T ss_pred HHHHcCCCCCCccchHHHHHHHHHHhhCchhhCHHHHHHHHHhcccccchHHHHHHHHHHHHHHccCCHHHHHHHHhHHH
Confidence 346688888888999999999998876677799999999988776655 3 8999999999998866432 2334455
Q ss_pred HHHhhhh--cCchhHHHHHHHHHHHHHHhhc----ChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhh----ccCCCh
Q psy14014 93 PPLESLA--TVEETVVRDKAVESLRLISAQH----SPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVC----YPRVTA 162 (615)
Q Consensus 93 ~~l~~l~--~~~~~~vr~~a~~~l~~l~~~~----~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~----~~~~~~ 162 (615)
..+.+.. ..++..||.+|..+|.+-.+.. ..+.-+++++..++..-..++.++|.+|..++..+ |.++..
T Consensus 175 taIv~gmrk~e~s~~vRLaa~~aL~nsLef~~~nF~~E~ern~iMqvvcEatq~~d~~i~~aa~~ClvkIm~LyY~~m~~ 254 (859)
T KOG1241|consen 175 TAIVQGMRKEETSAAVRLAALNALYNSLEFTKANFNNEMERNYIMQVVCEATQSPDEEIQVAAFQCLVKIMSLYYEFMEP 254 (859)
T ss_pred HHHHhhccccCCchhHHHHHHHHHHHHHHHHHHhhccHhhhceeeeeeeecccCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555443 2346789999999998865543 33445667888888877778888998888877765 445566
Q ss_pred hhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHh---------------ch------hhhHhhhHHHHHHhhc-----
Q psy14014 163 GVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVV---------------EV------DYLKTDIIPMFVNLAQ----- 216 (615)
Q Consensus 163 ~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~---------------~~------~~~~~~ll~~l~~~~~----- 216 (615)
++.+.++..........+++|.-.+++....+|.-- ++ ....+.++|.+.+++.
T Consensus 255 yM~~alfaitl~amks~~deValQaiEFWsticeEEiD~~~e~~e~~d~~~~p~~~~fa~~a~~~v~P~Ll~~L~kqde~ 334 (859)
T KOG1241|consen 255 YMEQALFAITLAAMKSDNDEVALQAIEFWSTICEEEIDLAIEYGEAVDQGLPPSSKYFARQALQDVVPVLLELLTKQDED 334 (859)
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHhHhhHHHHHHHHhCCCC
Confidence 677777777778788889999999999988777521 10 0123478898888774
Q ss_pred --cCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccc---hhhhHHHHHHH
Q psy14014 217 --DEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEI---TKTDLVQAFQM 291 (615)
Q Consensus 217 --d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~---~~~~l~~~l~~ 291 (615)
|++|.+.++|-.||.-++...+++. .+.++|.+.+-++.|+|+-|.+++.+||.+...-.... ...+.+|.++.
T Consensus 335 ~d~DdWnp~kAAg~CL~l~A~~~~D~I-v~~Vl~Fiee~i~~pdwr~reaavmAFGSIl~gp~~~~Lt~iV~qalp~ii~ 413 (859)
T KOG1241|consen 335 DDDDDWNPAKAAGVCLMLFAQCVGDDI-VPHVLPFIEENIQNPDWRNREAAVMAFGSILEGPEPDKLTPIVIQALPSIIN 413 (859)
T ss_pred cccccCcHHHHHHHHHHHHHHHhcccc-hhhhHHHHHHhcCCcchhhhhHHHHHHHhhhcCCchhhhhHHHhhhhHHHHH
Confidence 3468899999999999998888764 66899999999999999999999999999876433221 23578889999
Q ss_pred hhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcc-------hhh-
Q psy14014 292 LLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGK-------HNT- 363 (615)
Q Consensus 292 ~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~-------~~~- 363 (615)
++.|+.-.||..+..+++.++..++.......+....++.+.+-++| .|+|-..+++++..+++.... ...
T Consensus 414 lm~D~sl~VkdTaAwtlgrI~d~l~e~~~n~~~l~~~l~~l~~gL~D-ePrva~N~CWAf~~Laea~~eA~~s~~qt~~~ 492 (859)
T KOG1241|consen 414 LMSDPSLWVKDTAAWTLGRIADFLPEAIINQELLQSKLSALLEGLND-EPRVASNVCWAFISLAEAAYEAAVSNGQTDPA 492 (859)
T ss_pred HhcCchhhhcchHHHHHHHHHhhchhhcccHhhhhHHHHHHHHHhhh-CchHHHHHHHHHHHHHHHHHHhccCCCCCCcc
Confidence 99999999999999999999999886555556677778888877776 688889999999988865321 111
Q ss_pred hhhhHHHHHHhhc-----C-CChhHHHHHHHhhhHhhhhhchhHHHHHH-------------------------------
Q psy14014 364 VDHLLPLFLSQLK-----D-ECPEVRLNIISNLDCVNEVIGIQQWRVRL------------------------------- 406 (615)
Q Consensus 364 ~~~l~p~l~~~l~-----d-~~~~vr~~a~~~l~~l~~~~~~~~~~~~~------------------------------- 406 (615)
.+...+.+..+++ | ...+.|..|.++|.++++....+......
T Consensus 493 t~~y~~ii~~Ll~~tdr~dgnqsNLR~AAYeALmElIk~st~~vy~~v~~~~l~il~kl~q~i~~~~l~~~dr~q~~eLQ 572 (859)
T KOG1241|consen 493 TPFYEAIIGSLLKVTDRADGNQSNLRSAAYEALMELIKNSTDDVYPMVQKLTLVILEKLDQTISSQILSLADRAQLNELQ 572 (859)
T ss_pred chhHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHH
Confidence 1222333333332 2 24579999999999887665432111000
Q ss_pred -HHHhhhhhhhhccccch--hhhhhhhHHHHHhhhc-CCchHHHHHHHHhHHHHhhhChHh--HHHHHHHHHHHhc-CCc
Q psy14014 407 -AIIEYMPLLAGQLGVEF--FDEKLNALSIVELAED-SKWRVRLAIIEYMPLLAGQLGVEF--FDEKLNALCMTWL-VDH 479 (615)
Q Consensus 407 -~i~~~l~~l~~~~~~~~--~~~~l~~~~i~~~~~~-~~~~vr~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l-~d~ 479 (615)
.+..++..+.++.+.++ ..+.+. ..+.+.++. ++..+.+.+.-+++.++..+|+.| +.+.+.|++...| +-.
T Consensus 573 s~Lc~~Lq~i~rk~~~~~~~~~d~iM-~lflri~~s~~s~~v~e~a~laV~tl~~~Lg~~F~kym~~f~pyL~~gL~n~~ 651 (859)
T KOG1241|consen 573 SLLCNTLQSIIRKVGSDIREVSDQIM-GLFLRIFESKRSAVVHEEAFLAVSTLAESLGKGFAKYMPAFKPYLLMGLSNFQ 651 (859)
T ss_pred HHHHHHHHHHHHHccccchhHHHHHH-HHHHHHHcCCccccchHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHhhcch
Confidence 01112223333333322 122222 244555555 455678889999999999999977 5588999998888 667
Q ss_pred chHHHHHHHHHHHHHHHHhChHH--hhhchhHHHHhhhcCC--CchHHHHHHHHHHHHHhhhChhh--HHHhhHHHHHhh
Q psy14014 480 VYAIREAATLNLKKLVEQFGSEW--AQSTVIPKVVAMSRDQ--NYLHRMTCLFCINVLAEACGPTV--TANFLLPTVLNM 553 (615)
Q Consensus 480 ~~~vR~~a~~~l~~l~~~~~~~~--~~~~i~~~l~~~~~d~--~~~~R~~a~~~l~~l~~~~~~~~--~~~~i~~~l~~~ 553 (615)
.+.|..+|+...|.+++.++.++ +.+.+...|.+.+.++ ...++-..+.++|.|+-.+|.++ +.+.++|.+...
T Consensus 652 e~qVc~~aVglVgdl~raL~~~i~py~d~~mt~Lvq~Lss~~~hR~vKP~IlS~FgDIAlaIg~~F~~Yl~~vm~llq~a 731 (859)
T KOG1241|consen 652 EYQVCAAAVGLVGDLARALEDDILPYCDELMTVLVQCLSSPNLHRNVKPAILSVFGDIALAIGADFEPYLEMVMPLLQQA 731 (859)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCccccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 88999999999999999998874 3466888888888776 44567788899999998888765 457788888775
Q ss_pred C---CCC--------CchHHHHHHHHHHHHhHhhhh-------hhHHhhHHHHHhhhcCCCCc
Q psy14014 554 A---GDN--------VANVRFNVAKTLQKIGPILET-------NVIQSQVKPALDKLNGDTDV 598 (615)
Q Consensus 554 ~---~D~--------~~~vr~~a~~~l~~l~~~~~~-------~~~~~~~~~~l~~l~~d~d~ 598 (615)
. .|+ ...+|.++..+...++..+++ ..+.+.+...+.+...|+|-
T Consensus 732 s~~~~d~~~~~~~dYvd~LRe~~leay~gi~qglk~~~~~~~~~p~v~~I~sfi~~I~~e~~~ 794 (859)
T KOG1241|consen 732 SSVQTDPADDSMVDYVDELREGILEAYTGIIQGLKTHADVMLVQPYVPHIISFIDRIAAEPDV 794 (859)
T ss_pred HhccCCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhcchHHHHHHHHHHhcCccc
Confidence 4 333 236999999999999887763 12344455555555555543
No 10
>KOG1241|consensus
Probab=99.94 E-value=4.1e-23 Score=203.58 Aligned_cols=550 Identities=15% Similarity=0.169 Sum_probs=384.7
Q ss_pred hhccchhhhhhhcCCcHH-HHHHHHHHhccccCCCCCcchhhhchHHHhhhhcCchhH-HHHHHHHHHHHHHhhcChhHH
Q psy14014 49 TRGELIPFLTETIYDEDE-VLLALAEQLGTFTPNVGGPEYVHCLLPPLESLATVEETV-VRDKAVESLRLISAQHSPHDL 126 (615)
Q Consensus 49 ~~~~ll~~l~~~~~~~~~-vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~l~~~~~~~-vr~~a~~~l~~l~~~~~~~~~ 126 (615)
.++++-..+...+....+ ....|+++++.++..--....|+.+++.+..-..++++. +|++++++++.+++.+.++.+
T Consensus 87 ~reqVK~~il~tL~~~ep~~~s~Aaq~va~IA~~ElP~n~wp~li~~lv~nv~~~~~~~~k~~slealGyice~i~pevl 166 (859)
T KOG1241|consen 87 IREQVKNNILRTLGSPEPRRPSSAAQCVAAIACIELPQNQWPELIVTLVSNVGEEQASMVKESSLEALGYICEDIDPEVL 166 (859)
T ss_pred HHHHHHHHHHHHcCCCCCCccchHHHHHHHHHHhhCchhhCHHHHHHHHHhcccccchHHHHHHHHHHHHHHccCCHHHH
Confidence 344444444444443333 555666666666543223457899999988888887776 999999999999999999866
Q ss_pred hhh---HHHHHHH-hhcC-CCcchhhhHHhhhhhhccC----C-ChhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHH
Q psy14014 127 EAH---FVPLVQR-LASG-DWFTSRTSACGLFSVCYPR----V-TAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAK 196 (615)
Q Consensus 127 ~~~---~l~~l~~-l~~~-~~~~~r~~a~~~l~~~~~~----~-~~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~ 196 (615)
+.. ++-.+.. +... ++..+|.+|...+-..... + .+..++.++.......+.++.++|.++..+|..+..
T Consensus 167 ~~~sN~iLtaIv~gmrk~e~s~~vRLaa~~aL~nsLef~~~nF~~E~ern~iMqvvcEatq~~d~~i~~aa~~ClvkIm~ 246 (859)
T KOG1241|consen 167 EQQSNDILTAIVQGMRKEETSAAVRLAALNALYNSLEFTKANFNNEMERNYIMQVVCEATQSPDEEIQVAAFQCLVKIMS 246 (859)
T ss_pred HHHHhHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHHhhccHhhhceeeeeeeecccCCcHHHHHHHHHHHHHHHH
Confidence 554 3333332 2222 4678998888665433222 2 344567788888888889999999999999998876
Q ss_pred Hhch---hhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhh-c--------------Chh------hHHHhHHHHHHH
Q psy14014 197 VVEV---DYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASL-L--------------SQS------DVEQLVMPTLRQ 252 (615)
Q Consensus 197 ~~~~---~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~-~--------------~~~------~~~~~l~~~l~~ 252 (615)
..-. ....+.++++-....++++++|...+++.|.++++- + ++. .-.+.++|.+.+
T Consensus 247 LyY~~m~~yM~~alfaitl~amks~~deValQaiEFWsticeEEiD~~~e~~e~~d~~~~p~~~~fa~~a~~~v~P~Ll~ 326 (859)
T KOG1241|consen 247 LYYEFMEPYMEQALFAITLAAMKSDNDEVALQAIEFWSTICEEEIDLAIEYGEAVDQGLPPSSKYFARQALQDVVPVLLE 326 (859)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHhHhhHHHHH
Confidence 4322 223445777778888899999999999999977653 1 110 112367888877
Q ss_pred hcC-------CCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHH
Q psy14014 253 CSG-------DTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIM 325 (615)
Q Consensus 253 ~~~-------d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~ 325 (615)
++. |.+|..-+++.-||.-++...|++. .++++|.+.+-++.+++.-|.+|+.+++.+...-.+ .+...+.
T Consensus 327 ~L~kqde~~d~DdWnp~kAAg~CL~l~A~~~~D~I-v~~Vl~Fiee~i~~pdwr~reaavmAFGSIl~gp~~-~~Lt~iV 404 (859)
T KOG1241|consen 327 LLTKQDEDDDDDDWNPAKAAGVCLMLFAQCVGDDI-VPHVLPFIEENIQNPDWRNREAAVMAFGSILEGPEP-DKLTPIV 404 (859)
T ss_pred HHHhCCCCcccccCcHHHHHHHHHHHHHHHhcccc-hhhhHHHHHHhcCCcchhhhhHHHHHHHhhhcCCch-hhhhHHH
Confidence 652 3569999999999999999998875 459999999999999999999999999998874322 2234578
Q ss_pred HhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhc----chhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhH
Q psy14014 326 TYILPYVKDLVADPNQHVKSALASVIMGLSPILG----KHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQ 401 (615)
Q Consensus 326 ~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g----~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~ 401 (615)
+..+|.+.+++.|++-.||.+++++++++++.+. .+...+.+++.+.+.++| ++.|-.+++.++..+++.....
T Consensus 405 ~qalp~ii~lm~D~sl~VkdTaAwtlgrI~d~l~e~~~n~~~l~~~l~~l~~gL~D-ePrva~N~CWAf~~Laea~~eA- 482 (859)
T KOG1241|consen 405 IQALPSIINLMSDPSLWVKDTAAWTLGRIADFLPEAIINQELLQSKLSALLEGLND-EPRVASNVCWAFISLAEAAYEA- 482 (859)
T ss_pred hhhhHHHHHHhcCchhhhcchHHHHHHHHHhhchhhcccHhhhhHHHHHHHHHhhh-CchHHHHHHHHHHHHHHHHHHh-
Confidence 8899999999999999999999999999988754 344455667777788887 6889999999888776544211
Q ss_pred HHHHHHHHhhhhhh-hhccccchhhhhhhhHHHHHhhh--c-CCchHHHHHHHHhHHHHhhhChHhHH--HHHHHHHHH-
Q psy14014 402 WRVRLAIIEYMPLL-AGQLGVEFFDEKLNALSIVELAE--D-SKWRVRLAIIEYMPLLAGQLGVEFFD--EKLNALCMT- 474 (615)
Q Consensus 402 ~~~~~~i~~~l~~l-~~~~~~~~~~~~l~~~~i~~~~~--~-~~~~vr~~~~~~l~~l~~~~~~~~~~--~~l~~~l~~- 474 (615)
.+.= .+..--.||..++. .+.+..+ | ...+.|.++.++|..+.+....+.+. ..+.+.++.
T Consensus 483 ----------~~s~~qt~~~t~~y~~ii~--~Ll~~tdr~dgnqsNLR~AAYeALmElIk~st~~vy~~v~~~~l~il~k 550 (859)
T KOG1241|consen 483 ----------AVSNGQTDPATPFYEAIIG--SLLKVTDRADGNQSNLRSAAYEALMELIKNSTDDVYPMVQKLTLVILEK 550 (859)
T ss_pred ----------ccCCCCCCccchhHHHHHH--HHHhhccccccchhhHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 1000 00000134544332 2332221 2 45679999999999999877665422 122222222
Q ss_pred ---hcC---------CcchHHHHHHHHHHHHHHHHhChHH--hhhchhHHHHhhhcC-CCchHHHHHHHHHHHHHhhhCh
Q psy14014 475 ---WLV---------DHVYAIREAATLNLKKLVEQFGSEW--AQSTVIPKVVAMSRD-QNYLHRMTCLFCINVLAEACGP 539 (615)
Q Consensus 475 ---~l~---------d~~~~vR~~a~~~l~~l~~~~~~~~--~~~~i~~~l~~~~~d-~~~~~R~~a~~~l~~l~~~~~~ 539 (615)
.++ +...++...-..+|+.+.+.++++. ..+.++..++++++. ++..+...+..+++.+++.+|+
T Consensus 551 l~q~i~~~~l~~~dr~q~~eLQs~Lc~~Lq~i~rk~~~~~~~~~d~iM~lflri~~s~~s~~v~e~a~laV~tl~~~Lg~ 630 (859)
T KOG1241|consen 551 LDQTISSQILSLADRAQLNELQSLLCNTLQSIIRKVGSDIREVSDQIMGLFLRIFESKRSAVVHEEAFLAVSTLAESLGK 630 (859)
T ss_pred HHHHHHHHhccHhhHHHHHHHHHHHHHHHHHHHHHccccchhHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHhH
Confidence 111 1234455666677888888887743 235577888888877 5667788899999999999998
Q ss_pred hh--HHHhhHHHHHhhC-CCCCchHHHHHHHHHHHHhHhhhhh---hHHhhHHHHHhhhcC-CCCccHHHHHHHHHHHHh
Q psy14014 540 TV--TANFLLPTVLNMA-GDNVANVRFNVAKTLQKIGPILETN---VIQSQVKPALDKLNG-DTDVDVKYFAQEAISSIA 612 (615)
Q Consensus 540 ~~--~~~~i~~~l~~~~-~D~~~~vr~~a~~~l~~l~~~~~~~---~~~~~~~~~l~~l~~-d~d~~v~~~a~~a~~~~~ 612 (615)
.+ +.+.+.|.|...+ +-.+..|-..+....+.++..++++ +-...+..++++|.+ --+.+||-.....+++||
T Consensus 631 ~F~kym~~f~pyL~~gL~n~~e~qVc~~aVglVgdl~raL~~~i~py~d~~mt~Lvq~Lss~~~hR~vKP~IlS~FgDIA 710 (859)
T KOG1241|consen 631 GFAKYMPAFKPYLLMGLSNFQEYQVCAAAVGLVGDLARALEDDILPYCDELMTVLVQCLSSPNLHRNVKPAILSVFGDIA 710 (859)
T ss_pred hHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCccccccccchHHHHHHHHH
Confidence 76 3578899999877 6778889889999999998887653 334445556666643 338899999999999988
Q ss_pred hc
Q psy14014 613 DS 614 (615)
Q Consensus 613 ~~ 614 (615)
..
T Consensus 711 la 712 (859)
T KOG1241|consen 711 LA 712 (859)
T ss_pred HH
Confidence 64
No 11
>COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification]
Probab=99.94 E-value=8.6e-23 Score=196.19 Aligned_cols=550 Identities=15% Similarity=0.123 Sum_probs=387.8
Q ss_pred HHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCc--HHHHHHHHHHhccccCCCCC--cchhhhch
Q psy14014 17 VLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDE--DEVLLALAEQLGTFTPNVGG--PEYVHCLL 92 (615)
Q Consensus 17 ~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~--~~vr~~a~~~l~~l~~~~~~--~~~~~~l~ 92 (615)
.+-..+.|.|+.+|....+..+..+.++|-+ +++||+..++.+. .+-|+..+++..+++..+|. -.|+..++
T Consensus 285 ~mrpDi~~~deYVRnvt~ra~~vva~algv~----~llpfl~a~c~SrkSw~aRhTgiri~qqI~~llG~s~l~hl~~l~ 360 (975)
T COG5181 285 SMRPDITSKDEYVRNVTGRAVGVVADALGVE----ELLPFLEALCGSRKSWEARHTGIRIAQQICELLGRSRLSHLGPLL 360 (975)
T ss_pred eccCCcccccHHHHHHHHHHHHHHHHhhCcH----HHHHHHHHHhcCccchhhhchhhHHHHHHHHHhCccHHhhhhhHH
Confidence 3345678999999999999999999999876 8999999988764 35677666666666655443 46778889
Q ss_pred HHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHh---hhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChh----hH
Q psy14014 93 PPLESLATVEETVVRDKAVESLRLISAQHSPHDLE---AHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAG----VK 165 (615)
Q Consensus 93 ~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~---~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~----~~ 165 (615)
.++..++.|+...||.-++.++..+++...+-.++ ..+.|+.......... .-.+-.+..+.+.+.++++ ..
T Consensus 361 ~ci~~~l~D~~~~vRi~tA~alS~lae~~~Pygie~fd~vl~pLw~g~~~hrgk-~l~sfLkA~g~iiplm~peYa~h~t 439 (975)
T COG5181 361 KCISKLLKDRSRFVRIDTANALSYLAELVGPYGIEQFDEVLCPLWEGASQHRGK-ELVSFLKAMGFIIPLMSPEYACHDT 439 (975)
T ss_pred HHHHHHhhccceeeeehhHhHHHHHHHhcCCcchHHHHHHHHHHHHHHHhcCCc-hHHHHHHHhccccccCChHhhhhhH
Confidence 99999999999999999999999999998874443 3455655444332110 1111224445555555433 34
Q ss_pred HHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhc--hhhhHhhhHHHHHHhhccCchhHHHHHH---------HHHHHHH
Q psy14014 166 AELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVE--VDYLKTDIIPMFVNLAQDEQDSVRLLAV---------EACVSIA 234 (615)
Q Consensus 166 ~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~--~~~~~~~ll~~l~~~~~d~~~~vr~~a~---------~~l~~l~ 234 (615)
.+.+..+...+..++.+.++..........+.-+ +.....++.|.|.+-. +.|+.|. .+-..++
T Consensus 440 re~m~iv~ref~spdeemkk~~l~v~~~C~~v~~~tp~~lr~~v~pefF~~f-----w~rr~A~dr~~~k~v~~ttvilA 514 (975)
T COG5181 440 REHMEIVFREFKSPDEEMKKDLLVVERICDKVGTDTPWKLRDQVSPEFFSPF-----WRRRSAGDRRSYKQVVLTTVILA 514 (975)
T ss_pred HHHHHHHHHHhCCchhhcchhHHHHHHHHhccCCCCHHHHHHhhcHHhhchH-----HHhhhcccccccceeehhHHHHH
Confidence 5677777788888888877766554443333221 2223344555444321 2222222 3334445
Q ss_pred hhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCc------------------------------------
Q psy14014 235 SLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGP------------------------------------ 278 (615)
Q Consensus 235 ~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~------------------------------------ 278 (615)
+..++.. +..-+.+..+|+....|...+.+...+...+|.
T Consensus 515 k~~g~~~----v~~kil~~~~De~ep~r~m~a~~vsri~~~lg~~~~dErleerl~d~il~Afqeq~~t~~~il~~f~tv 590 (975)
T COG5181 515 KMGGDPR----VSRKILEYYSDEPEPYRKMNAGLVSRIFSRLGRLGFDERLEERLYDSILNAFQEQDTTVGLILPCFSTV 590 (975)
T ss_pred HHcCChH----HHHHHHhhccCCcchhhhhhhHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhccccccEEEecccce
Confidence 4444432 334444455666666666666555444433321
Q ss_pred --------cchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHH
Q psy14014 279 --------EITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASV 350 (615)
Q Consensus 279 --------~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~ 350 (615)
+.....++...++.++++.|.||+.|+...+.+...+..- .+...+..+-..|.+.+....+.|-..++++
T Consensus 591 ~vsl~~r~kp~l~~ivStiL~~L~~k~p~vR~~aadl~~sl~~vlk~c-~e~~~l~klg~iLyE~lge~ypEvLgsil~A 669 (975)
T COG5181 591 LVSLEFRGKPHLSMIVSTILKLLRSKPPDVRIRAADLMGSLAKVLKAC-GETKELAKLGNILYENLGEDYPEVLGSILKA 669 (975)
T ss_pred eeehhhccCcchHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHhc-chHHHHHHHhHHHHHhcCcccHHHHHHHHHH
Confidence 0112456777888999999999999999888877655321 1113455566677788889999999999999
Q ss_pred HHhhchhhcch---hhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhh----hchhHHHHHHHHHhhhhhhhhccccch
Q psy14014 351 IMGLSPILGKH---NTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEV----IGIQQWRVRLAIIEYMPLLAGQLGVEF 423 (615)
Q Consensus 351 l~~l~~~~g~~---~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~----~~~~~~~~~~~i~~~l~~l~~~~~~~~ 423 (615)
+..+..+.+-. .-...++|.+...|++.+..|....+..++.++.. ++..+|..-.
T Consensus 670 i~~I~sv~~~~~mqpPi~~ilP~ltPILrnkh~Kv~~nti~lvg~I~~~~peyi~~rEWMRIc----------------- 732 (975)
T COG5181 670 ICSIYSVHRFRSMQPPISGILPSLTPILRNKHQKVVANTIALVGTICMNSPEYIGVREWMRIC----------------- 732 (975)
T ss_pred HHHHhhhhcccccCCchhhccccccHhhhhhhHHHhhhHHHHHHHHHhcCcccCCHHHHHHHH-----------------
Confidence 99888776543 23457899999999999999999999888877643 3445554322
Q ss_pred hhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHh
Q psy14014 424 FDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWA 503 (615)
Q Consensus 424 ~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~ 503 (615)
-.+.+.+.+.+-.+|..|.+.++.+++..|++. ++..+++.|.-.....|.+...+++.+++.+|+-
T Consensus 733 -------feLvd~Lks~nKeiRR~A~~tfG~Is~aiGPqd----vL~~LlnnLkvqeRq~RvctsvaI~iVae~cgpf-- 799 (975)
T COG5181 733 -------FELVDSLKSWNKEIRRNATETFGCISRAIGPQD----VLDILLNNLKVQERQQRVCTSVAISIVAEYCGPF-- 799 (975)
T ss_pred -------HHHHHHHHHhhHHHHHhhhhhhhhHHhhcCHHH----HHHHHHhcchHHHHHhhhhhhhhhhhhHhhcCch--
Confidence 134566677778899999999999999999964 6667788888888999999999999999999863
Q ss_pred hhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhh--HHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhhH
Q psy14014 504 QSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTV--TANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVI 581 (615)
Q Consensus 504 ~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~--~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~ 581 (615)
.++|.+..-+..++.++....++++..+.+..|... +...+.|.+...+.|.|+.-|+.++..+..+.-.++...-
T Consensus 800 --sVlP~lm~dY~TPe~nVQnGvLkam~fmFeyig~~s~dYvy~itPlleDAltDrD~vhRqta~nvI~Hl~Lnc~gtg~ 877 (975)
T COG5181 800 --SVLPTLMSDYETPEANVQNGVLKAMCFMFEYIGQASLDYVYSITPLLEDALTDRDPVHRQTAMNVIRHLVLNCPGTGD 877 (975)
T ss_pred --hhHHHHHhcccCchhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhhcccchHHHHHHHHHHHHHhcCCCCccc
Confidence 689999999999999999999999999999987643 4567999999999999999999999999999765443222
Q ss_pred HhhHHHHHhhh---cCCCCccHHHHHHHHHHHHhh
Q psy14014 582 QSQVKPALDKL---NGDTDVDVKYFAQEAISSIAD 613 (615)
Q Consensus 582 ~~~~~~~l~~l---~~d~d~~v~~~a~~a~~~~~~ 613 (615)
.+....++.-| .-|+-+.|...-.+.++.++.
T Consensus 878 eda~IHLlNllwpNIle~sPhvi~~~~Eg~e~~~~ 912 (975)
T COG5181 878 EDAAIHLLNLLWPNILEPSPHVIQSFDEGMESFAT 912 (975)
T ss_pred HHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHH
Confidence 33344444444 468888888888888777664
No 12
>KOG1824|consensus
Probab=99.93 E-value=3.8e-22 Score=200.57 Aligned_cols=572 Identities=15% Similarity=0.208 Sum_probs=370.0
Q ss_pred HHHHHhcCccHHHHHHHHhcHHHHH----HHhCcchhhccchhhhhhhcCCcH-HHHHHHHHHhccccCCCCCcchhhhc
Q psy14014 17 VLIDELKNEDVQLRLNSIKKLSTIA----LALGQERTRGELIPFLTETIYDED-EVLLALAEQLGTFTPNVGGPEYVHCL 91 (615)
Q Consensus 17 ~ll~~l~s~d~~~R~~a~~~l~~~~----~~~~~~~~~~~ll~~l~~~~~~~~-~vr~~a~~~l~~l~~~~~~~~~~~~l 91 (615)
.++++|.|.|.+.|++|...|..-- ..+..+ ....++..+.++++|.+ +|+..|.+|+|.++..++. .++..+
T Consensus 9 ~LlekmtssDKDfRfMAtsDLm~eLqkdsi~Ld~d-Se~kvv~~lLklL~D~ngEVQnlAVKClg~lvsKvke-~~le~~ 86 (1233)
T KOG1824|consen 9 NLLEKMTSSDKDFRFMATSDLMTELQKDSIKLDDD-SERKVVKMLLKLLEDKNGEVQNLAVKCLGPLVSKVKE-DQLETI 86 (1233)
T ss_pred HHHHHccCCCcchhhhhHHHHHHHHHhhhhhcccc-chhHHHHHHHHHHhccCcHHHHHHHHHHHHHHhhchH-HHHHHH
Confidence 7899999999999999998887653 234334 55677888888899988 6999999999998876643 334444
Q ss_pred hHHHhhhhcCchhHHHHHHHHHHHHHHhhcCh-------hHHhhhHHHHHHHh---------------------------
Q psy14014 92 LPPLESLATVEETVVRDKAVESLRLISAQHSP-------HDLEAHFVPLVQRL--------------------------- 137 (615)
Q Consensus 92 ~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~-------~~~~~~~l~~l~~l--------------------------- 137 (615)
..-|..-.-......|..+.-+|..+...+++ ..+-..++|.+...
T Consensus 87 ve~L~~~~~s~keq~rdissi~Lktvi~nl~P~~~~~la~tV~~~~t~~l~~~i~~qe~~sai~~e~lDil~d~lsr~g~ 166 (1233)
T KOG1824|consen 87 VENLCSNMLSGKEQLRDISSIGLKTVIANLPPSSSSFLAATVCKRITPKLKQAISKQEDVSAIKCEVLDILADVLSRFGT 166 (1233)
T ss_pred HHHHhhhhccchhhhccHHHHHHHHHHhcCCCccccccccHHHHHHHHHHHHHhhhcccchhhHHHHHHHHHHHHHhhcc
Confidence 44333322233455555555555555555543 01111122222211
Q ss_pred ----------------hcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHHHHHh-CCCChHHHHHHHHhHHHHHHHhch
Q psy14014 138 ----------------ASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNLC-QDDTPMVRRAAAGKLGELAKVVEV 200 (615)
Q Consensus 138 ----------------~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~~l~-~d~~~~vR~~a~~~l~~l~~~~~~ 200 (615)
...+...+|+.++..++.+....+...-.++...+.+.+ +......-+.-+++++.++...|.
T Consensus 167 ll~~fh~~il~~l~~ql~s~R~aVrKkai~~l~~la~~~~~~ly~~li~~Ll~~L~~~~q~~~~rt~Iq~l~~i~r~ag~ 246 (1233)
T KOG1824|consen 167 LLPNFHLSILKCLLPQLQSPRLAVRKKAITALGHLASSCNRDLYVELIEHLLKGLSNRTQMSATRTYIQCLAAICRQAGH 246 (1233)
T ss_pred cCcchHHHHHHHHhhcccChHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHhcc
Confidence 112223456666666666666666555555554444433 333344444556677777776665
Q ss_pred h--hhHhhhHHHHHHhh---ccCchhHHHHHHHHHHHHHhhcChhh--HHHhHHHHHHHh--------------------
Q psy14014 201 D--YLKTDIIPMFVNLA---QDEQDSVRLLAVEACVSIASLLSQSD--VEQLVMPTLRQC-------------------- 253 (615)
Q Consensus 201 ~--~~~~~ll~~l~~~~---~d~~~~vr~~a~~~l~~l~~~~~~~~--~~~~l~~~l~~~-------------------- 253 (615)
+ ...+.+.|.+..++ +.++++.|+.++++++.+....+.+. +.+.++..+.+.
T Consensus 247 r~~~h~~~ivp~v~~y~~~~e~~dDELrE~~lQale~fl~rcp~ei~p~~pei~~l~l~yisYDPNy~yd~~eDed~~~~ 326 (1233)
T KOG1824|consen 247 RFGSHLDKIVPLVADYCNKIEEDDDELREYCLQALESFLRRCPKEILPHVPEIINLCLSYISYDPNYNYDTEEDEDAMFL 326 (1233)
T ss_pred hhhcccchhhHHHHHHhcccccCcHHHHHHHHHHHHHHHHhChhhhcccchHHHHHHHHHhccCCCCCCCCccchhhhhh
Confidence 3 24567899999998 67789999999999999999888652 233333333211
Q ss_pred ------------c--CCCChHHHHHHHHHHHHHHHHhCccc--hhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccc
Q psy14014 254 ------------S--GDTSWRVRYMVADKFTDLQKAVGPEI--TKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDA 317 (615)
Q Consensus 254 ------------~--~d~~~~vR~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~ 317 (615)
. +|-+|.||+++++++..+...-.+.. ....+-|.++..+++.+..|+...+.++-.+....++
T Consensus 327 ed~eDde~~deYsDDeD~SWkVRRaAaKcl~a~IsSR~E~L~~~~q~l~p~lI~RfkEREEnVk~dvf~~yi~ll~qt~~ 406 (1233)
T KOG1824|consen 327 EDEEDDEQDDEYSDDEDMSWKVRRAAAKCLEAVISSRLEMLPDFYQTLGPALISRFKEREENVKADVFHAYIALLKQTRP 406 (1233)
T ss_pred hccccchhccccccccchhHHHHHHHHHHHHHHHhccHHHHHHHHHHhCHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCC
Confidence 1 13369999999999988765322111 2345678888889999999999999988888776543
Q ss_pred cch---------------hHHHH----HhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcc--hhhhhhhHHHHHHhhc
Q psy14014 318 YNQ---------------ENIIM----TYILPYVKDLVADPNQHVKSALASVIMGLSPILGK--HNTVDHLLPLFLSQLK 376 (615)
Q Consensus 318 ~~~---------------~~~~~----~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~--~~~~~~l~p~l~~~l~ 376 (615)
... ...++ ..++..+.+.+.+.+.+.|..+...+..+..++.. ....+.++|.+.-.+.
T Consensus 407 ~~~~~~d~d~~e~~g~~s~~~~L~~~~~~iVkai~~qlr~ks~kt~~~cf~lL~eli~~lp~~l~~~~~slvpgI~~~l~ 486 (1233)
T KOG1824|consen 407 VIEVLADNDAMEQGGTPSDLSMLSDQVPLIVKAIQKQLREKSVKTRQGCFLLLTELINVLPGALAQHIPSLVPGIIYSLN 486 (1233)
T ss_pred CcccccCchhhhccCCccchHHHHhhhHHHHHHHHHHHhhccccchhhHHHHHHHHHHhCcchhhhcccccchhhhhhcC
Confidence 210 00222 23344444556666667788877777777665432 3345568899998898
Q ss_pred CCC--hhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHH
Q psy14014 377 DEC--PEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPL 454 (615)
Q Consensus 377 d~~--~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~ 454 (615)
|.+ ...+..++..+..+....+.+.+... ++.+. |.+.....++.+++-..++.....
T Consensus 487 DkSsss~~ki~~L~fl~~~L~s~~p~~fhp~------~~~Ls--------------~~v~~aV~d~fyKisaEAL~v~~~ 546 (1233)
T KOG1824|consen 487 DKSSSSNLKIDALVFLYSALISHPPEVFHPH------LSALS--------------PPVVAAVGDPFYKISAEALLVCQQ 546 (1233)
T ss_pred CccchHHHHHHHHHHHHHHHhcCChhhcccc------hhhhh--------------hHHHHHhcCchHhhhHHHHHHHHH
Confidence 864 35566666665554444444433322 22221 556666778888888888888888
Q ss_pred HHhhhC---------hHhHHHHHHHHHHHhc--CCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcC--CCch
Q psy14014 455 LAGQLG---------VEFFDEKLNALCMTWL--VDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRD--QNYL 521 (615)
Q Consensus 455 l~~~~~---------~~~~~~~l~~~l~~~l--~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d--~~~~ 521 (615)
+++.+. ...+...+....++.+ +|.+.+||++|+.++|.++..||+ +. ..-+|..+..+-+ .|..
T Consensus 547 lvkvirpl~~~~~~d~~~~v~~m~~~tl~rL~a~d~DqeVkeraIscmgq~i~~fgD-~l-~~eL~~~L~il~eRl~nEi 624 (1233)
T KOG1824|consen 547 LVKVIRPLQPPSSFDASPYVKTMYDCTLQRLKATDSDQEVKERAISCMGQIIANFGD-FL-GNELPRTLPILLERLGNEI 624 (1233)
T ss_pred HHHHhcccCCCccCCCChhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHhh-hh-hhhhHHHHHHHHHHHhchh
Confidence 877542 2223344555445543 688899999999999999999994 22 2334444433322 4667
Q ss_pred HHHHHHHHHHHHHhh---hChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhh---hHHhhHHHHHhhhcCC
Q psy14014 522 HRMTCLFCINVLAEA---CGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETN---VIQSQVKPALDKLNGD 595 (615)
Q Consensus 522 ~R~~a~~~l~~l~~~---~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~---~~~~~~~~~l~~l~~d 595 (615)
+|..|++|+..++.. ++.......++|.+...+.-.....|.....++..+.+.++.. +..+.+..-+..|..+
T Consensus 625 TRl~AvkAlt~Ia~S~l~i~l~~~l~~il~~l~~flrK~~r~lr~~~l~a~~~L~~~~~~~~~~~~~e~vL~el~~Lise 704 (1233)
T KOG1824|consen 625 TRLTAVKALTLIAMSPLDIDLSPVLTEILPELASFLRKNQRALRLATLTALDKLVKNYSDSIPAELLEAVLVELPPLISE 704 (1233)
T ss_pred HHHHHHHHHHHHHhccceeehhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhhhhhH
Confidence 899999999999864 2333456778888888888778889999999999998887643 3334444444456799
Q ss_pred CCccHHHHHHHHHHHHh
Q psy14014 596 TDVDVKYFAQEAISSIA 612 (615)
Q Consensus 596 ~d~~v~~~a~~a~~~~~ 612 (615)
.|..|.+.|...+...+
T Consensus 705 sdlhvt~~a~~~L~tl~ 721 (1233)
T KOG1824|consen 705 SDLHVTQLAVAFLTTLA 721 (1233)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999998877654
No 13
>COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification]
Probab=99.92 E-value=6.5e-22 Score=190.23 Aligned_cols=559 Identities=18% Similarity=0.249 Sum_probs=360.1
Q ss_pred hHHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhh-hcCCcH-H-HHHHHHHHhccccCCCCCcchhhh
Q psy14014 14 PIAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTE-TIYDED-E-VLLALAEQLGTFTPNVGGPEYVHC 90 (615)
Q Consensus 14 ~i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~-~~~~~~-~-vr~~a~~~l~~l~~~~~~~~~~~~ 90 (615)
.+..++-..++..+..|..+++.|..-+..+|++...+.++|.+.. .++|+. . +.+.+-..|..+.... -.|.+.
T Consensus 169 ~v~rllLkvKNG~~~mR~~~lRiLtdkav~fg~~~vfnkvLp~lm~r~LeDqerhl~vk~idr~Ly~lddl~--~pyvhk 246 (975)
T COG5181 169 DVYRLLLKVKNGGKRMRMEGLRILTDKAVNFGAAAVFNKVLPMLMSRELEDQERHLVVKLIDRLLYGLDDLK--VPYVHK 246 (975)
T ss_pred hHHHHHhhcccCCchhhHHHHHHHHHHhhcccHHHHHHHHHHHHHhhhhhhhhhHhHHHHHHHHHHhccccc--ccceee
Confidence 5778888999999999999999999999999999999999999865 467766 3 4555555555444321 122232
Q ss_pred chHHHhhhh-----------------------------------cCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHH
Q psy14014 91 LLPPLESLA-----------------------------------TVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQ 135 (615)
Q Consensus 91 l~~~l~~l~-----------------------------------~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~ 135 (615)
++-....++ .+.++.||.....+.+.++..++- +.++|++.
T Consensus 247 ILvVv~pllided~~~r~~g~eii~nL~~~~Gl~~~vs~mrpDi~~~deYVRnvt~ra~~vva~algv----~~llpfl~ 322 (975)
T COG5181 247 ILVVVGPLLIDEDLKRRCMGREIILNLVYRCGLGFSVSSMRPDITSKDEYVRNVTGRAVGVVADALGV----EELLPFLE 322 (975)
T ss_pred EEEEeeccccCccHHHhcccHHHHHHHHHHhccceeeeeccCCcccccHHHHHHHHHHHHHHHHhhCc----HHHHHHHH
Confidence 222222222 344566777666666666666654 35778888
Q ss_pred HhhcCC-CcchhhhHHhhhhhhccCCChhh---HHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhch---hhhHhhhH
Q psy14014 136 RLASGD-WFTSRTSACGLFSVCYPRVTAGV---KAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEV---DYLKTDII 208 (615)
Q Consensus 136 ~l~~~~-~~~~r~~a~~~l~~~~~~~~~~~---~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~---~~~~~~ll 208 (615)
.++++. ++..|..++++...++..++-.. ...++.-+..++.|.+..||-.++.++..+++..++ +.+..-+-
T Consensus 323 a~c~SrkSw~aRhTgiri~qqI~~llG~s~l~hl~~l~~ci~~~l~D~~~~vRi~tA~alS~lae~~~Pygie~fd~vl~ 402 (975)
T COG5181 323 ALCGSRKSWEARHTGIRIAQQICELLGRSRLSHLGPLLKCISKLLKDRSRFVRIDTANALSYLAELVGPYGIEQFDEVLC 402 (975)
T ss_pred HHhcCccchhhhchhhHHHHHHHHHhCccHHhhhhhHHHHHHHHhhccceeeeehhHhHHHHHHHhcCCcchHHHHHHHH
Confidence 888875 77778788877777776665443 344555566777888888888888888888887765 22221111
Q ss_pred HHHHHhhccCchhHHHHHHHHHHHHHhhc----------------------ChhhHHHhHHHHHHHh---cCCCChHHHH
Q psy14014 209 PMFVNLAQDEQDSVRLLAVEACVSIASLL----------------------SQSDVEQLVMPTLRQC---SGDTSWRVRY 263 (615)
Q Consensus 209 ~~l~~~~~d~~~~vr~~a~~~l~~l~~~~----------------------~~~~~~~~l~~~l~~~---~~d~~~~vR~ 263 (615)
|.....-++...+ -..-+.+.+.+.... +++...+.++-....+ -.+.-|..|.
T Consensus 403 pLw~g~~~hrgk~-l~sfLkA~g~iiplm~peYa~h~tre~m~iv~ref~spdeemkk~~l~v~~~C~~v~~~tp~~lr~ 481 (975)
T COG5181 403 PLWEGASQHRGKE-LVSFLKAMGFIIPLMSPEYACHDTREHMEIVFREFKSPDEEMKKDLLVVERICDKVGTDTPWKLRD 481 (975)
T ss_pred HHHHHHHhcCCch-HHHHHHHhccccccCChHhhhhhHHHHHHHHHHHhCCchhhcchhHHHHHHHHhccCCCCHHHHHH
Confidence 2111111111111 011111111111111 1111122222111111 1233344443
Q ss_pred HHHH-HHH----------------------HHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccch
Q psy14014 264 MVAD-KFT----------------------DLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQ 320 (615)
Q Consensus 264 ~~~~-~l~----------------------~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~ 320 (615)
...- .|. .+++..| ...+..-+...++|+...-|..++.....+...++....
T Consensus 482 ~v~pefF~~fw~rr~A~dr~~~k~v~~ttvilAk~~g----~~~v~~kil~~~~De~ep~r~m~a~~vsri~~~lg~~~~ 557 (975)
T COG5181 482 QVSPEFFSPFWRRRSAGDRRSYKQVVLTTVILAKMGG----DPRVSRKILEYYSDEPEPYRKMNAGLVSRIFSRLGRLGF 557 (975)
T ss_pred hhcHHhhchHHHhhhcccccccceeehhHHHHHHHcC----ChHHHHHHHhhccCCcchhhhhhhHHHHHHHHhcccccc
Confidence 3221 111 1122212 234555566667777666677666666666555442110
Q ss_pred ----------------------------------------hHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhh--
Q psy14014 321 ----------------------------------------ENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPIL-- 358 (615)
Q Consensus 321 ----------------------------------------~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~-- 358 (615)
.+.++..++..+.++++++.+.||..++...+.++.++
T Consensus 558 dErleerl~d~il~Afqeq~~t~~~il~~f~tv~vsl~~r~kp~l~~ivStiL~~L~~k~p~vR~~aadl~~sl~~vlk~ 637 (975)
T COG5181 558 DERLEERLYDSILNAFQEQDTTVGLILPCFSTVLVSLEFRGKPHLSMIVSTILKLLRSKPPDVRIRAADLMGSLAKVLKA 637 (975)
T ss_pred cHHHHHHHHHHHHHHHHhccccccEEEecccceeeehhhccCcchHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHh
Confidence 11234445555566788888889988888888877664
Q ss_pred -cchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhh
Q psy14014 359 -GKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELA 437 (615)
Q Consensus 359 -g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~ 437 (615)
|......++--.+.+.+....++|.-..+.+++++....+-..+++. |-+.+ |.+.-.+
T Consensus 638 c~e~~~l~klg~iLyE~lge~ypEvLgsil~Ai~~I~sv~~~~~mqpP--i~~il------------------P~ltPIL 697 (975)
T COG5181 638 CGETKELAKLGNILYENLGEDYPEVLGSILKAICSIYSVHRFRSMQPP--ISGIL------------------PSLTPIL 697 (975)
T ss_pred cchHHHHHHHhHHHHHhcCcccHHHHHHHHHHHHHHhhhhcccccCCc--hhhcc------------------ccccHhh
Confidence 33444445555666777777888888888888777655543322211 11123 5566667
Q ss_pred hcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHH---HHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhh
Q psy14014 438 EDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALC---MTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAM 514 (615)
Q Consensus 438 ~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l---~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~ 514 (615)
+++..++....+..++.++..-....-....+.++ .+.|...+.++|.+|..++|-+++.+|+. .++..|++.
T Consensus 698 rnkh~Kv~~nti~lvg~I~~~~peyi~~rEWMRIcfeLvd~Lks~nKeiRR~A~~tfG~Is~aiGPq----dvL~~Llnn 773 (975)
T COG5181 698 RNKHQKVVANTIALVGTICMNSPEYIGVREWMRICFELVDSLKSWNKEIRRNATETFGCISRAIGPQ----DVLDILLNN 773 (975)
T ss_pred hhhhHHHhhhHHHHHHHHHhcCcccCCHHHHHHHHHHHHHHHHHhhHHHHHhhhhhhhhHHhhcCHH----HHHHHHHhc
Confidence 77888888888888998887543321112334444 44567789999999999999999999975 688899999
Q ss_pred hcCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhh--hhHHhhHHHHHhhh
Q psy14014 515 SRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILET--NVIQSQVKPALDKL 592 (615)
Q Consensus 515 ~~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~--~~~~~~~~~~l~~l 592 (615)
++..+...|..+.-+++.+++.+|+= .++|.+..=..-+..+|+..+.+++..+.+..+. ..+...+.|++...
T Consensus 774 LkvqeRq~RvctsvaI~iVae~cgpf----sVlP~lm~dY~TPe~nVQnGvLkam~fmFeyig~~s~dYvy~itPlleDA 849 (975)
T COG5181 774 LKVQERQQRVCTSVAISIVAEYCGPF----SVLPTLMSDYETPEANVQNGVLKAMCFMFEYIGQASLDYVYSITPLLEDA 849 (975)
T ss_pred chHHHHHhhhhhhhhhhhhHhhcCch----hhHHHHHhcccCchhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhHHHHhh
Confidence 99999999999999999999999863 3688888777789999999999999999998874 45677899999999
Q ss_pred cCCCCccHHHHHHHHHHHH
Q psy14014 593 NGDTDVDVKYFAQEAISSI 611 (615)
Q Consensus 593 ~~d~d~~v~~~a~~a~~~~ 611 (615)
++|.|+..|+-|...+.-+
T Consensus 850 ltDrD~vhRqta~nvI~Hl 868 (975)
T COG5181 850 LTDRDPVHRQTAMNVIRHL 868 (975)
T ss_pred hcccchHHHHHHHHHHHHH
Confidence 9999999999998877654
No 14
>PLN03200 cellulose synthase-interactive protein; Provisional
Probab=99.90 E-value=2.5e-19 Score=200.62 Aligned_cols=575 Identities=13% Similarity=0.099 Sum_probs=387.1
Q ss_pred CCcchHHHHHHHhcCc--cHHHHHHHHhcHHHHHHHhCcch--h--hccchhhhhhhcCCcH-HHHHHHHHHhccccCCC
Q psy14014 10 DSLYPIAVLIDELKNE--DVQLRLNSIKKLSTIALALGQER--T--RGELIPFLTETIYDED-EVLLALAEQLGTFTPNV 82 (615)
Q Consensus 10 ~~~~~i~~ll~~l~s~--d~~~R~~a~~~l~~~~~~~~~~~--~--~~~ll~~l~~~~~~~~-~vr~~a~~~l~~l~~~~ 82 (615)
.....+..+++++.+. ++..|..+...|..+++.-...+ + ....+|.|..++...+ .+|..++..|..+...
T Consensus 10 ~~~~~v~~Lve~L~s~~ss~~~~~~Al~~Lr~Lak~~~enR~~Ia~~aGaIP~LV~lL~sg~~~vk~nAaaaL~nLS~~- 88 (2102)
T PLN03200 10 GTLASVAQCIEQLRAKSSSPQEKELTTARLLELAKTREEARKAIGSHSQAMPLLVSLLRSGTLGAKVNAAAVLGVLCKE- 88 (2102)
T ss_pred chHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHhcChHHHHHHHHccCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcC-
Confidence 3355799999999987 77888899998888876432211 1 2456788888887655 4888777777777643
Q ss_pred CCcchh-----hhchHHHhhhhcCchhHHHHHHHHHHHHHHhhcChh------HHhhhHHHHHHHhhcCCCc---chhhh
Q psy14014 83 GGPEYV-----HCLLPPLESLATVEETVVRDKAVESLRLISAQHSPH------DLEAHFVPLVQRLASGDWF---TSRTS 148 (615)
Q Consensus 83 ~~~~~~-----~~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~------~~~~~~l~~l~~l~~~~~~---~~r~~ 148 (615)
+++. ...+|.|..++.+.+...|+.|+.+|..+...-..+ ....-.+|.+..+..+... ..+..
T Consensus 89 --e~nk~~Iv~~GaIppLV~LL~sGs~eaKe~AA~AL~sLS~~~~~D~~~~~I~v~~GaVp~Lv~lL~~gsk~d~~L~~~ 166 (2102)
T PLN03200 89 --EDLRVKVLLGGCIPPLLSLLKSGSAEAQKAAAEAIYAVSSGGLSDHVGSKIFSTEGVVPSLWDQLQPGNKQDKVVEGL 166 (2102)
T ss_pred --HHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHHHHHHHHcCcchhhhhhhhhhhcCChHHHHHHHhCCchhhHHHHHH
Confidence 2221 345667777777888999999999999998754211 1224457777777766432 23444
Q ss_pred HHhhhhhhccCCChh----hHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhch---hhhHhhhHHHHHHhhcc-Cch
Q psy14014 149 ACGLFSVCYPRVTAG----VKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEV---DYLKTDIIPMFVNLAQD-EQD 220 (615)
Q Consensus 149 a~~~l~~~~~~~~~~----~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~---~~~~~~ll~~l~~~~~d-~~~ 220 (615)
++..+..++..-... .....+|.+..+++++++.++..++.++..++...+. .......+|.+.+++++ .+.
T Consensus 167 Av~AL~nLs~~~en~~~~IIeaGaVp~LV~LLsS~d~~lQ~eAa~aLa~Lass~ee~~~aVIeaGaVP~LV~LL~sg~~~ 246 (2102)
T PLN03200 167 LTGALRNLCGSTDGFWSATLEAGGVDILVKLLSSGNSDAQANAASLLARLMMAFESSISKVLDAGAVKQLLKLLGQGNEV 246 (2102)
T ss_pred HHHHHHHHhcCccchHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHccCCCh
Confidence 555666655443321 2334778888999999999999999988888765332 33456789999999975 456
Q ss_pred hHHHHHHHHHHHHHhhcChh---hHHHhHHHHHHHhcCCCCh---------HHHHHHHHHHHHHHHHhCc----------
Q psy14014 221 SVRLLAVEACVSIASLLSQS---DVEQLVMPTLRQCSGDTSW---------RVRYMVADKFTDLQKAVGP---------- 278 (615)
Q Consensus 221 ~vr~~a~~~l~~l~~~~~~~---~~~~~l~~~l~~~~~d~~~---------~vR~~~~~~l~~l~~~~~~---------- 278 (615)
.+|+.|..+|..++..-+.. ......+|.+.+++..++. ..++.++.+|++++.....
T Consensus 247 ~VRE~AA~AL~nLAs~s~e~r~~Iv~aGgIp~LI~lL~sp~~e~~~~~~~~~Lqe~AvwALsNIcgg~~~ll~~L~~ll~ 326 (2102)
T PLN03200 247 SVRAEAAGALEALSSQSKEAKQAIADAGGIPALINATVAPSKEFMQGEFAQALQENAMGALANICGGMSALILYLGELSE 326 (2102)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHhCcchhhhccccchHHHHHHHHHHHHHhCCchhhHHHHHHhhc
Confidence 89999999999998753221 1122356777776655443 3477777777776542110
Q ss_pred -c-----------------------c------hhhhHHHHHHHhhcCCcHHH-HHHHHHHH-------------------
Q psy14014 279 -E-----------------------I------TKTDLVQAFQMLLKDSEAEV-RAAAANKV------------------- 308 (615)
Q Consensus 279 -~-----------------------~------~~~~l~~~l~~~l~d~~~~v-r~~a~~~l------------------- 308 (615)
. . ....+.+.+.+++++.++.+ ++.+..+|
T Consensus 327 s~rd~~~~ada~gALayll~l~d~~~~~~~~i~~~~v~~~LV~Llr~k~p~~vqe~V~eALasl~gN~~l~~~L~~~dai 406 (2102)
T PLN03200 327 SPRSPAPIADTLGALAYALMVFDSSAESTRAFDPTVIEQILVKLLKPRDTKLVQERIIEALASLYGNAYLSRKLNHAEAK 406 (2102)
T ss_pred ccchHHHHHHHHhhHHHHHHhcCCchhhhhhccccccHHHHHHHhCCCCCchhHHHHHHHHHHhcCChHHHHHHHhccch
Confidence 0 0 00012344555565554432 44444444
Q ss_pred ----------------------HHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcc--hh-h
Q psy14014 309 ----------------------RDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGK--HN-T 363 (615)
Q Consensus 309 ----------------------~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~--~~-~ 363 (615)
..++.. +.+..........+|.|.+++.+.+..+|..++..++.++..-.. .. .
T Consensus 407 k~LV~LL~~~~~evQ~~Av~aL~~L~~~-~~e~~~aIi~~ggIp~LV~LL~s~s~~iQ~~A~~~L~nLa~~ndenr~aIi 485 (2102)
T PLN03200 407 KVLVGLITMATADVQEELIRALSSLCCG-KGGLWEALGGREGVQLLISLLGLSSEQQQEYAVALLAILTDEVDESKWAIT 485 (2102)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHhCC-CHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 222221 001111112234689999999999999999999999998753211 11 1
Q ss_pred hhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCch
Q psy14014 364 VDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWR 443 (615)
Q Consensus 364 ~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~ 443 (615)
....+|.|.++|..++..++..|+.++..+... .++.+..+.-...+ |.+.+++++.+++
T Consensus 486 eaGaIP~LV~LL~s~~~~iqeeAawAL~NLa~~--~~qir~iV~~aGAI------------------ppLV~LL~sgd~~ 545 (2102)
T PLN03200 486 AAGGIPPLVQLLETGSQKAKEDSATVLWNLCCH--SEDIRACVESAGAV------------------PALLWLLKNGGPK 545 (2102)
T ss_pred HCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCC--cHHHHHHHHHCCCH------------------HHHHHHHhCCCHH
Confidence 235799999999999999999999999988652 22222111001122 5677888889999
Q ss_pred HHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHH-h-----hhchhHHHHhhhcC
Q psy14014 444 VRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEW-A-----QSTVIPKVVAMSRD 517 (615)
Q Consensus 444 vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~-~-----~~~i~~~l~~~~~d 517 (615)
.+..++.++..+...-..+ .++.+..++..++..++..++..++.+......+. . ....+|.|.+++++
T Consensus 546 ~q~~Aa~AL~nLi~~~d~~-----~I~~Lv~LLlsdd~~~~~~aL~vLgnIlsl~~~~d~~~~g~~~~ggL~~Lv~LL~s 620 (2102)
T PLN03200 546 GQEIAAKTLTKLVRTADAA-----TISQLTALLLGDLPESKVHVLDVLGHVLSVASLEDLVREGSAANDALRTLIQLLSS 620 (2102)
T ss_pred HHHHHHHHHHHHHhccchh-----HHHHHHHHhcCCChhHHHHHHHHHHHHHhhcchhHHHHHhhhccccHHHHHHHHcC
Confidence 9999999999987643322 33556777887888899999999999877543321 1 13478999999999
Q ss_pred CCchHHHHHHHHHHHHHhhhCh---hhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhh----hHHhhHHHHHh
Q psy14014 518 QNYLHRMTCLFCINVLAEACGP---TVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETN----VIQSQVKPALD 590 (615)
Q Consensus 518 ~~~~~R~~a~~~l~~l~~~~~~---~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~----~~~~~~~~~l~ 590 (615)
++..++..|++++.+++..-.. ..+....+|.+..++...+.+++..++++|.++....... .......+.+.
T Consensus 621 gs~~ikk~Aa~iLsnL~a~~~d~~~avv~agaIpPLV~LLss~~~~v~keAA~AL~nL~~~~~~~q~~~~v~~GaV~pL~ 700 (2102)
T PLN03200 621 SKEETQEKAASVLADIFSSRQDLCESLATDEIINPCIKLLTNNTEAVATQSARALAALSRSIKENRKVSYAAEDAIKPLI 700 (2102)
T ss_pred CCHHHHHHHHHHHHHHhcCChHHHHHHHHcCCHHHHHHHHhcCChHHHHHHHHHHHHHHhCCCHHHHHHHHHcCCHHHHH
Confidence 9999999999999999853221 2234567888999999999999999999999998533221 12333444466
Q ss_pred hhcCCCCccHHHHHHHHHHHHhh
Q psy14014 591 KLNGDTDVDVKYFAQEAISSIAD 613 (615)
Q Consensus 591 ~l~~d~d~~v~~~a~~a~~~~~~ 613 (615)
.+++++|.++++.|..|+..+..
T Consensus 701 ~LL~~~d~~v~e~Al~ALanLl~ 723 (2102)
T PLN03200 701 KLAKSSSIEVAEQAVCALANLLS 723 (2102)
T ss_pred HHHhCCChHHHHHHHHHHHHHHc
Confidence 66688999999999999998864
No 15
>PLN03200 cellulose synthase-interactive protein; Provisional
Probab=99.90 E-value=1.2e-19 Score=203.18 Aligned_cols=566 Identities=13% Similarity=0.133 Sum_probs=394.4
Q ss_pred hHHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcc---hhhccchhhhhhhcCC-cH-HHHHHHHHHhccccCCCCCcchh
Q psy14014 14 PIAVLIDELKNEDVQLRLNSIKKLSTIALALGQE---RTRGELIPFLTETIYD-ED-EVLLALAEQLGTFTPNVGGPEYV 88 (615)
Q Consensus 14 ~i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~---~~~~~ll~~l~~~~~~-~~-~vr~~a~~~l~~l~~~~~~~~~~ 88 (615)
.+..++.-++++++..+..|...|..++...+.. -.....+|.+.+++.+ ++ .+|..++-+|+.++.. .+++.
T Consensus 190 aVp~LV~LLsS~d~~lQ~eAa~aLa~Lass~ee~~~aVIeaGaVP~LV~LL~sg~~~~VRE~AA~AL~nLAs~--s~e~r 267 (2102)
T PLN03200 190 GVDILVKLLSSGNSDAQANAASLLARLMMAFESSISKVLDAGAVKQLLKLLGQGNEVSVRAEAAGALEALSSQ--SKEAK 267 (2102)
T ss_pred CHHHHHHHHcCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHccCCChHHHHHHHHHHHHHhcC--CHHHH
Confidence 5677888889999999999988887776543221 1345678888888864 44 5999999999988863 22222
Q ss_pred h-----hchHHHhhhhcCc---------hhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCc-chhhhHHhhh
Q psy14014 89 H-----CLLPPLESLATVE---------ETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWF-TSRTSACGLF 153 (615)
Q Consensus 89 ~-----~l~~~l~~l~~~~---------~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~-~~r~~a~~~l 153 (615)
. .-+|.|..++..+ ....++.|+-++.+++... ..++|.+..+.+++.. ..-..++..+
T Consensus 268 ~~Iv~aGgIp~LI~lL~sp~~e~~~~~~~~~Lqe~AvwALsNIcgg~------~~ll~~L~~ll~s~rd~~~~ada~gAL 341 (2102)
T PLN03200 268 QAIADAGGIPALINATVAPSKEFMQGEFAQALQENAMGALANICGGM------SALILYLGELSESPRSPAPIADTLGAL 341 (2102)
T ss_pred HHHHHCCCHHHHHHHHhCcchhhhccccchHHHHHHHHHHHHHhCCc------hhhHHHHHHhhcccchHHHHHHHHhhH
Confidence 1 1244555544432 2456889999999998765 3577888777665422 2222344555
Q ss_pred hhhccCCCh---hhH----HHHHHHHHHHhCCCChH-HHHHHHHhHHHHHHHh--chhhhHhhhHHHHHHhhccCchhHH
Q psy14014 154 SVCYPRVTA---GVK----AELRSHFRNLCQDDTPM-VRRAAAGKLGELAKVV--EVDYLKTDIIPMFVNLAQDEQDSVR 223 (615)
Q Consensus 154 ~~~~~~~~~---~~~----~~l~~~l~~l~~d~~~~-vR~~a~~~l~~l~~~~--~~~~~~~~ll~~l~~~~~d~~~~vr 223 (615)
.++...... ..+ ..+.+.+.++++++++. +...+..+|..+.... ..-....+..+.+..+++..+.+++
T Consensus 342 ayll~l~d~~~~~~~~i~~~~v~~~LV~Llr~k~p~~vqe~V~eALasl~gN~~l~~~L~~~daik~LV~LL~~~~~evQ 421 (2102)
T PLN03200 342 AYALMVFDSSAESTRAFDPTVIEQILVKLLKPRDTKLVQERIIEALASLYGNAYLSRKLNHAEAKKVLVGLITMATADVQ 421 (2102)
T ss_pred HHHHHhcCCchhhhhhccccccHHHHHHHhCCCCCchhHHHHHHHHHHhcCChHHHHHHHhccchhhhhhhhccCCHHHH
Confidence 555333321 111 13456788999887666 4777777775532211 1111234677888899998889999
Q ss_pred HHHHHHHHHHHhhcChh---hHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCcc---chhhhHHHHHHHhhcCCc
Q psy14014 224 LLAVEACVSIASLLSQS---DVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPE---ITKTDLVQAFQMLLKDSE 297 (615)
Q Consensus 224 ~~a~~~l~~l~~~~~~~---~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~---~~~~~l~~~l~~~l~d~~ 297 (615)
..++.++..++..-... ......+|.|.+++.+++..+++.++..++.++..-... ......+|.|.++++..+
T Consensus 422 ~~Av~aL~~L~~~~~e~~~aIi~~ggIp~LV~LL~s~s~~iQ~~A~~~L~nLa~~ndenr~aIieaGaIP~LV~LL~s~~ 501 (2102)
T PLN03200 422 EELIRALSSLCCGKGGLWEALGGREGVQLLISLLGLSSEQQQEYAVALLAILTDEVDESKWAITAAGGIPPLVQLLETGS 501 (2102)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCC
Confidence 99999999887653321 112336899999999999999999999999987532111 122468999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccchhHHH-HHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhc
Q psy14014 298 AEVRAAAANKVRDFCQNLDAYNQENII-MTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLK 376 (615)
Q Consensus 298 ~~vr~~a~~~l~~~~~~~~~~~~~~~~-~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~ 376 (615)
+.+|+.|+.++..++.+ .......+ ....+|.|.+++++.++++|..++++|.++...-.. ..++.+..++.
T Consensus 502 ~~iqeeAawAL~NLa~~--~~qir~iV~~aGAIppLV~LL~sgd~~~q~~Aa~AL~nLi~~~d~-----~~I~~Lv~LLl 574 (2102)
T PLN03200 502 QKAKEDSATVLWNLCCH--SEDIRACVESAGAVPALLWLLKNGGPKGQEIAAKTLTKLVRTADA-----ATISQLTALLL 574 (2102)
T ss_pred HHHHHHHHHHHHHHhCC--cHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhccch-----hHHHHHHHHhc
Confidence 99999999999998873 22112222 236888999999999999999999999998764222 23466778888
Q ss_pred CCChhHHHHHHHhhhHhhhhhchhHHHHHHH-HHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHH
Q psy14014 377 DECPEVRLNIISNLDCVNEVIGIQQWRVRLA-IIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLL 455 (615)
Q Consensus 377 d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~-i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l 455 (615)
.+++.++..+++.++.+.......+...... .-..+ |.+.+++++++.++++.++..+..+
T Consensus 575 sdd~~~~~~aL~vLgnIlsl~~~~d~~~~g~~~~ggL------------------~~Lv~LL~sgs~~ikk~Aa~iLsnL 636 (2102)
T PLN03200 575 GDLPESKVHVLDVLGHVLSVASLEDLVREGSAANDAL------------------RTLIQLLSSSKEETQEKAASVLADI 636 (2102)
T ss_pred CCChhHHHHHHHHHHHHHhhcchhHHHHHhhhccccH------------------HHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 8888999999998888766544332211100 00011 6788899999999999999999998
Q ss_pred HhhhCh---HhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHH----hhhchhHHHHhhhcCCCchHHHHHHH
Q psy14014 456 AGQLGV---EFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEW----AQSTVIPKVVAMSRDQNYLHRMTCLF 528 (615)
Q Consensus 456 ~~~~~~---~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~----~~~~i~~~l~~~~~d~~~~~R~~a~~ 528 (615)
+..-.. .......+|.+..++.+.+..+|..+..+++.+......+. .....+|.|.+++++.+..++..++.
T Consensus 637 ~a~~~d~~~avv~agaIpPLV~LLss~~~~v~keAA~AL~nL~~~~~~~q~~~~v~~GaV~pL~~LL~~~d~~v~e~Al~ 716 (2102)
T PLN03200 637 FSSRQDLCESLATDEIINPCIKLLTNNTEAVATQSARALAALSRSIKENRKVSYAAEDAIKPLIKLAKSSSIEVAEQAVC 716 (2102)
T ss_pred hcCChHHHHHHHHcCCHHHHHHHHhcCChHHHHHHHHHHHHHHhCCCHHHHHHHHHcCCHHHHHHHHhCCChHHHHHHHH
Confidence 762211 22345577889999999999999999999999997433221 22348899999999999999999999
Q ss_pred HHHHHHhhhChh--hHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhh-------HHhhHHHHHhhhcCCCCcc
Q psy14014 529 CINVLAEACGPT--VTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNV-------IQSQVKPALDKLNGDTDVD 599 (615)
Q Consensus 529 ~l~~l~~~~~~~--~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~-------~~~~~~~~l~~l~~d~d~~ 599 (615)
++++++...... ......+|.|.+++.+..+.+|.+|+.+|.+++...+.+. ....+.|++..| +-.|.+
T Consensus 717 ALanLl~~~e~~~ei~~~~~I~~Lv~lLr~G~~~~k~~Aa~AL~~L~~~~~~~~~~~~~~~~~g~v~~l~~~L-~~~~~~ 795 (2102)
T PLN03200 717 ALANLLSDPEVAAEALAEDIILPLTRVLREGTLEGKRNAARALAQLLKHFPVDDVLKDSVQCRGTVLALVDLL-NSTDLD 795 (2102)
T ss_pred HHHHHHcCchHHHHHHhcCcHHHHHHHHHhCChHHHHHHHHHHHHHHhCCChhHHHHHHHHHhCcHHHHHHHH-hcCCcc
Confidence 999998764322 2345678999999999999999999999999997765221 123356666555 444444
Q ss_pred HHHH--HHHHHHHHhh
Q psy14014 600 VKYF--AQEAISSIAD 613 (615)
Q Consensus 600 v~~~--a~~a~~~~~~ 613 (615)
.... |.+++..++.
T Consensus 796 ~~~~~~al~~l~~l~~ 811 (2102)
T PLN03200 796 SSATSEALEALALLAR 811 (2102)
T ss_pred hhhHHHHHHHHHHHHh
Confidence 4444 8888877765
No 16
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. Clathrin coats contain both clathrin and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors []. All AP complexes are heterotetramers composed of two large subunits (adaptins), a medium subunit (mu) and a small subunit (sigma). Each subunit has a specific function. Adaptin subunits recognise and bind to clathrin through their hinge region (clathrin box), and recruit accessory proteins that modulate AP function through their C-terminal appendage domains. By contrast, GGAs are monomers composed of four domains, which have functions similar to AP subunits: an N-terminal VHS (Vps27p/Hrs/Stam) domain, a GAT (GGA and Tom1) domain, a hinge region, and a C-terminal GAE (gamma-adaptin ear) domain. The GAE domain is similar to the AP gamma-adaptin ear domain, being responsible for the recruitment of accessory proteins that regulate clathrin-mediated endocytosis []. While clathrin mediates endocytic protein transport from ER to Golgi, coatomers (COPI, COPII) primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the N-terminal domain of various adaptins from different AP clathrin adaptor complexes (including AP1, AP2, AP3 and AP4), and from the beta and gamma subunits of various coatomer (COP) adaptors. This domain has a 2-layer alpha/alpha fold that forms a right-handed superhelix, and is a member of the ARM repeat superfamily []. The N-terminal region of the various AP adaptor proteins share strong sequence identity; by contrast, the C-terminal domains of different adaptins share similar structural folds, but have little sequence identity []. It has been proposed that the N-terminal domain interacts with another uniform component of the coated vesicles. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 1W63_C 2JKR_A 2JKT_A 2XA7_A 2VGL_B 3TJZ_E.
Probab=99.88 E-value=1.1e-18 Score=184.37 Aligned_cols=510 Identities=16% Similarity=0.152 Sum_probs=351.6
Q ss_pred HHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcH-HHHHHHHHHhccccCCCCCcchhhhchH
Q psy14014 15 IAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDED-EVLLALAEQLGTFTPNVGGPEYVHCLLP 93 (615)
Q Consensus 15 i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~-~vr~~a~~~l~~l~~~~~~~~~~~~l~~ 93 (615)
+...++..+ .+...|..+++.+-.+. ..|.+ ...+.+-+.+++.+++ +.|+.+--.+..+... .++...-..+
T Consensus 9 l~~~~~~~~-~~~~~~~~~l~kli~~~-~~G~~--~~~~~~~vi~l~~s~~~~~Krl~yl~l~~~~~~--~~~~~~l~~n 82 (526)
T PF01602_consen 9 LAKILNSFK-IDISKKKEALKKLIYLM-MLGYD--ISFLFMEVIKLISSKDLELKRLGYLYLSLYLHE--DPELLILIIN 82 (526)
T ss_dssp HHHHHHCSS-THHHHHHHHHHHHHHHH-HTT-----GSTHHHHHCTCSSSSHHHHHHHHHHHHHHTTT--SHHHHHHHHH
T ss_pred HHHHHhcCC-CCHHHHHHHHHHHHHHH-HcCCC--CchHHHHHHHHhCCCCHHHHHHHHHHHHHHhhc--chhHHHHHHH
Confidence 444444444 36667777777666652 33443 2255555666666555 5777666666555542 2233333455
Q ss_pred HHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHHH
Q psy14014 94 PLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFR 173 (615)
Q Consensus 94 ~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~ 173 (615)
.+..-+.++++.+|-.|+.+++.+. . +++.+.+.+.+.
T Consensus 83 ~l~kdl~~~n~~~~~lAL~~l~~i~---~---------------------------------------~~~~~~l~~~v~ 120 (526)
T PF01602_consen 83 SLQKDLNSPNPYIRGLALRTLSNIR---T---------------------------------------PEMAEPLIPDVI 120 (526)
T ss_dssp HHHHHHCSSSHHHHHHHHHHHHHH----S---------------------------------------HHHHHHHHHHHH
T ss_pred HHHHhhcCCCHHHHHHHHhhhhhhc---c---------------------------------------cchhhHHHHHHH
Confidence 5666667778888888888777765 1 122333445567
Q ss_pred HHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChh--hHHHhHHHHHH
Q psy14014 174 NLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQS--DVEQLVMPTLR 251 (615)
Q Consensus 174 ~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~--~~~~~l~~~l~ 251 (615)
+++.|+++.||+.|+.++..+.+..+...... +++.+.++++|+++.|+.+|+.++..+ +.-+.. ...+.+.+.+.
T Consensus 121 ~ll~~~~~~VRk~A~~~l~~i~~~~p~~~~~~-~~~~l~~lL~d~~~~V~~~a~~~l~~i-~~~~~~~~~~~~~~~~~L~ 198 (526)
T PF01602_consen 121 KLLSDPSPYVRKKAALALLKIYRKDPDLVEDE-LIPKLKQLLSDKDPSVVSAALSLLSEI-KCNDDSYKSLIPKLIRILC 198 (526)
T ss_dssp HHHHSSSHHHHHHHHHHHHHHHHHCHCCHHGG-HHHHHHHHTTHSSHHHHHHHHHHHHHH-HCTHHHHTTHHHHHHHHHH
T ss_pred HHhcCCchHHHHHHHHHHHHHhccCHHHHHHH-HHHHHhhhccCCcchhHHHHHHHHHHH-ccCcchhhhhHHHHHHHhh
Confidence 88889999999999999999998755533233 799999999999999999999999888 222222 34555666677
Q ss_pred HhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHH
Q psy14014 252 QCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPY 331 (615)
Q Consensus 252 ~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~ 331 (615)
+.+.++++..+..+++.+..++...........+++.+..++++.++.|+..++..+..+.... .....+++.
T Consensus 199 ~~l~~~~~~~q~~il~~l~~~~~~~~~~~~~~~~i~~l~~~l~s~~~~V~~e~~~~i~~l~~~~-------~~~~~~~~~ 271 (526)
T PF01602_consen 199 QLLSDPDPWLQIKILRLLRRYAPMEPEDADKNRIIEPLLNLLQSSSPSVVYEAIRLIIKLSPSP-------ELLQKAINP 271 (526)
T ss_dssp HHHTCCSHHHHHHHHHHHTTSTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSH-------HHHHHHHHH
T ss_pred hcccccchHHHHHHHHHHHhcccCChhhhhHHHHHHHHHHHhhccccHHHHHHHHHHHHhhcch-------HHHHhhHHH
Confidence 7778899888888888887665422111101468888888899999999999998888655421 246778889
Q ss_pred HHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhh
Q psy14014 332 VKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEY 411 (615)
Q Consensus 332 l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~ 411 (615)
+..++.++++.+|..++.++..++...... . ......+..+..+++..+|..++..+..++..- .+.. .
T Consensus 272 L~~lL~s~~~nvr~~~L~~L~~l~~~~~~~-v-~~~~~~~~~l~~~~d~~Ir~~~l~lL~~l~~~~---n~~~------I 340 (526)
T PF01602_consen 272 LIKLLSSSDPNVRYIALDSLSQLAQSNPPA-V-FNQSLILFFLLYDDDPSIRKKALDLLYKLANES---NVKE------I 340 (526)
T ss_dssp HHHHHTSSSHHHHHHHHHHHHHHCCHCHHH-H-GTHHHHHHHHHCSSSHHHHHHHHHHHHHH--HH---HHHH------H
T ss_pred HHHHhhcccchhehhHHHHHHHhhcccchh-h-hhhhhhhheecCCCChhHHHHHHHHHhhccccc---chhh------H
Confidence 999999999999999999999998765221 1 122223333444788999999998887765422 1111 1
Q ss_pred hhhhhhccccchhhhhhhhHHHHHhhhc-CCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHH
Q psy14014 412 MPLLAGQLGVEFFDEKLNALSIVELAED-SKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLN 490 (615)
Q Consensus 412 l~~l~~~~~~~~~~~~l~~~~i~~~~~~-~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~ 490 (615)
+ +.+.+.+.+ .+..+|..++..+..++..+... .+..++.+++++......++..+...
T Consensus 341 l------------------~eL~~~l~~~~d~~~~~~~i~~I~~la~~~~~~--~~~~v~~l~~ll~~~~~~~~~~~~~~ 400 (526)
T PF01602_consen 341 L------------------DELLKYLSELSDPDFRRELIKAIGDLAEKFPPD--AEWYVDTLLKLLEISGDYVSNEIINV 400 (526)
T ss_dssp H------------------HHHHHHHHHC--HHHHHHHHHHHHHHHHHHGSS--HHHHHHHHHHHHHCTGGGCHCHHHHH
T ss_pred H------------------HHHHHHHHhccchhhhhhHHHHHHHHHhccCch--HHHHHHHHHHhhhhccccccchHHHH
Confidence 2 344455533 36669999999999999877542 34456677777777767778888888
Q ss_pred HHHHHHHhChHHhhhchhHHHHhhhcC-CCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHH
Q psy14014 491 LKKLVEQFGSEWAQSTVIPKVVAMSRD-QNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTL 569 (615)
Q Consensus 491 l~~l~~~~~~~~~~~~i~~~l~~~~~d-~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l 569 (615)
+..+...... ....++..+.+.+.+ .++..+..+++++|+.++..+.......++..+.+...+..+.||..+..++
T Consensus 401 i~~ll~~~~~--~~~~~l~~L~~~l~~~~~~~~~~~~~wilGEy~~~~~~~~~~~~~~~~l~~~~~~~~~~vk~~ilt~~ 478 (526)
T PF01602_consen 401 IRDLLSNNPE--LREKILKKLIELLEDISSPEALAAAIWILGEYGELIENTESAPDILRSLIENFIEESPEVKLQILTAL 478 (526)
T ss_dssp HHHHHHHSTT--THHHHHHHHHHHHTSSSSHHHHHHHHHHHHHHCHHHTTTTHHHHHHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred HHHHhhcChh--hhHHHHHHHHHHHHHhhHHHHHHHHHhhhcccCCcccccccHHHHHHHHHHhhccccHHHHHHHHHHH
Confidence 8888776432 234567777777665 5778899999999999988765114455666677667777889999999999
Q ss_pred HHHhHhhhhhhHHhhHHHHHhhhcC--CCCccHHHHHHHHHHHHhhc
Q psy14014 570 QKIGPILETNVIQSQVKPALDKLNG--DTDVDVKYFAQEAISSIADS 614 (615)
Q Consensus 570 ~~l~~~~~~~~~~~~~~~~l~~l~~--d~d~~v~~~a~~a~~~~~~~ 614 (615)
..+....+.....+.+...+..+.+ +.|.+||+.|.+-+..+..+
T Consensus 479 ~Kl~~~~~~~~~~~~i~~~~~~~~~~~s~~~evr~Ra~~y~~ll~~~ 525 (526)
T PF01602_consen 479 AKLFKRNPENEVQNEILQFLLSLATEDSSDPEVRDRAREYLRLLNSK 525 (526)
T ss_dssp HHHHHHSCSTTHHHHHHHHHHCHHHHS-SSHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhCCchhhHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHccc
Confidence 9999887655556678888888877 88999999999998877653
No 17
>KOG1824|consensus
Probab=99.88 E-value=4e-18 Score=172.00 Aligned_cols=543 Identities=15% Similarity=0.127 Sum_probs=357.9
Q ss_pred cCCcH-HHHHHHHHHhcc-ccC---CCCCcchhhhchHHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHH
Q psy14014 61 IYDED-EVLLALAEQLGT-FTP---NVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQ 135 (615)
Q Consensus 61 ~~~~~-~vr~~a~~~l~~-l~~---~~~~~~~~~~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~ 135 (615)
+++++ ..|-+|..-|.+ +-. .+ +.+-...++..+.++++|.+.+|...|+.+++-+.+..+++.++..+-.+..
T Consensus 14 mtssDKDfRfMAtsDLm~eLqkdsi~L-d~dSe~kvv~~lLklL~D~ngEVQnlAVKClg~lvsKvke~~le~~ve~L~~ 92 (1233)
T KOG1824|consen 14 MTSSDKDFRFMATSDLMTELQKDSIKL-DDDSERKVVKMLLKLLEDKNGEVQNLAVKCLGPLVSKVKEDQLETIVENLCS 92 (1233)
T ss_pred ccCCCcchhhhhHHHHHHHHHhhhhhc-cccchhHHHHHHHHHHhccCcHHHHHHHHHHHHHHhhchHHHHHHHHHHHhh
Confidence 34444 577666544332 111 11 1233456677788888999999999999999999999998888777666666
Q ss_pred HhhcCCCcchhhhHHhhhh---hhccC----CChhhHHHHHHHHHHHh--CCCChHHHHHHHHhHHHHHHHhch--hhhH
Q psy14014 136 RLASGDWFTSRTSACGLFS---VCYPR----VTAGVKAELRSHFRNLC--QDDTPMVRRAAAGKLGELAKVVEV--DYLK 204 (615)
Q Consensus 136 ~l~~~~~~~~r~~a~~~l~---~~~~~----~~~~~~~~l~~~l~~l~--~d~~~~vR~~a~~~l~~l~~~~~~--~~~~ 204 (615)
.+.++.....-.+++.+.. .+.+. +.....+.+.+.+.... +.+...+|-.+++.++.+...+|. ..+.
T Consensus 93 ~~~s~keq~rdissi~Lktvi~nl~P~~~~~la~tV~~~~t~~l~~~i~~qe~~sai~~e~lDil~d~lsr~g~ll~~fh 172 (1233)
T KOG1824|consen 93 NMLSGKEQLRDISSIGLKTVIANLPPSSSSFLAATVCKRITPKLKQAISKQEDVSAIKCEVLDILADVLSRFGTLLPNFH 172 (1233)
T ss_pred hhccchhhhccHHHHHHHHHHhcCCCccccccccHHHHHHHHHHHHHhhhcccchhhHHHHHHHHHHHHHhhcccCcchH
Confidence 6565554433444444333 33332 23445566666666544 345667898899988888777664 1234
Q ss_pred hhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccch--h
Q psy14014 205 TDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEIT--K 282 (615)
Q Consensus 205 ~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~--~ 282 (615)
..++..+..-+..+...||+.|+.+++.++...+.+.+...+...+..+.+.++...-+..+++++.++...|.... .
T Consensus 173 ~~il~~l~~ql~s~R~aVrKkai~~l~~la~~~~~~ly~~li~~Ll~~L~~~~q~~~~rt~Iq~l~~i~r~ag~r~~~h~ 252 (1233)
T KOG1824|consen 173 LSILKCLLPQLQSPRLAVRKKAITALGHLASSCNRDLYVELIEHLLKGLSNRTQMSATRTYIQCLAAICRQAGHRFGSHL 252 (1233)
T ss_pred HHHHHHHhhcccChHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHhcchhhccc
Confidence 45555555556677788999999999999999988765554444445555556666677788999999988876542 4
Q ss_pred hhHHHHHHHhh---cCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhh-----------------------
Q psy14014 283 TDLVQAFQMLL---KDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLV----------------------- 336 (615)
Q Consensus 283 ~~l~~~l~~~l---~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~----------------------- 336 (615)
+.++|.+.+++ +..+.+.|+..+++++.|...++.+.. .+++.++..+.+.+
T Consensus 253 ~~ivp~v~~y~~~~e~~dDELrE~~lQale~fl~rcp~ei~--p~~pei~~l~l~yisYDPNy~yd~~eDed~~~~ed~e 330 (1233)
T KOG1824|consen 253 DKIVPLVADYCNKIEEDDDELREYCLQALESFLRRCPKEIL--PHVPEIINLCLSYISYDPNYNYDTEEDEDAMFLEDEE 330 (1233)
T ss_pred chhhHHHHHHhcccccCcHHHHHHHHHHHHHHHHhChhhhc--ccchHHHHHHHHHhccCCCCCCCCccchhhhhhhccc
Confidence 57899999988 778889999999999999998876533 12233333222211
Q ss_pred -----------CCCCHHHHHHHHHHHHhhchhhcc--hhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhch-hHH
Q psy14014 337 -----------ADPNQHVKSALASVIMGLSPILGK--HNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGI-QQW 402 (615)
Q Consensus 337 -----------~d~~~~vR~~~~~~l~~l~~~~g~--~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~-~~~ 402 (615)
.|.+|.||+++++++..+...... ..+.+.+-|.++..++++.++|+...+.++-.+....+. ..|
T Consensus 331 Dde~~deYsDDeD~SWkVRRaAaKcl~a~IsSR~E~L~~~~q~l~p~lI~RfkEREEnVk~dvf~~yi~ll~qt~~~~~~ 410 (1233)
T KOG1824|consen 331 DDEQDDEYSDDEDMSWKVRRAAAKCLEAVISSRLEMLPDFYQTLGPALISRFKEREENVKADVFHAYIALLKQTRPVIEV 410 (1233)
T ss_pred cchhccccccccchhHHHHHHHHHHHHHHHhccHHHHHHHHHHhCHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCCccc
Confidence 234699999999999887654332 345667888999999999999999999887766554321 011
Q ss_pred HHHHHHHhhhhhhhhccccc----hhhhhh--hhHHHHHhhhcCCchHHHHHHHHhHHHHhhhCh--HhHHHHHHHHHHH
Q psy14014 403 RVRLAIIEYMPLLAGQLGVE----FFDEKL--NALSIVELAEDSKWRVRLAIIEYMPLLAGQLGV--EFFDEKLNALCMT 474 (615)
Q Consensus 403 ~~~~~i~~~l~~l~~~~~~~----~~~~~l--~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~--~~~~~~l~~~l~~ 474 (615)
...... + ...|.. ...+.. ....+.+.++++.-+.|...+..+..+...+.. ....+.++|-+..
T Consensus 411 ~~d~d~---~----e~~g~~s~~~~L~~~~~~iVkai~~qlr~ks~kt~~~cf~lL~eli~~lp~~l~~~~~slvpgI~~ 483 (1233)
T KOG1824|consen 411 LADNDA---M----EQGGTPSDLSMLSDQVPLIVKAIQKQLREKSVKTRQGCFLLLTELINVLPGALAQHIPSLVPGIIY 483 (1233)
T ss_pred ccCchh---h----hccCCccchHHHHhhhHHHHHHHHHHHhhccccchhhHHHHHHHHHHhCcchhhhcccccchhhhh
Confidence 100000 0 001111 011111 002344455666667888888888887765532 2234567888888
Q ss_pred hcCCcc--hHHHHHHHHHHHHHHHHhChHHhhh---chhHHHHhhhcCCCchHHHHHHHHHHHHHhhhCh---------h
Q psy14014 475 WLVDHV--YAIREAATLNLKKLVEQFGSEWAQS---TVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGP---------T 540 (615)
Q Consensus 475 ~l~d~~--~~vR~~a~~~l~~l~~~~~~~~~~~---~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~---------~ 540 (615)
.++|.+ ...+..++..+.......+++.+.+ .+.|.+.....|+-|.+-..|+...+.+.+.+-+ +
T Consensus 484 ~l~DkSsss~~ki~~L~fl~~~L~s~~p~~fhp~~~~Ls~~v~~aV~d~fyKisaEAL~v~~~lvkvirpl~~~~~~d~~ 563 (1233)
T KOG1824|consen 484 SLNDKSSSSNLKIDALVFLYSALISHPPEVFHPHLSALSPPVVAAVGDPFYKISAEALLVCQQLVKVIRPLQPPSSFDAS 563 (1233)
T ss_pred hcCCccchHHHHHHHHHHHHHHHhcCChhhcccchhhhhhHHHHHhcCchHhhhHHHHHHHHHHHHHhcccCCCccCCCC
Confidence 898864 5788899999888888888876553 3556666678899999999999888888876422 1
Q ss_pred hHHHhhHHH-HHhh-CCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHHHHhhhc-CCCCccHHHHHHHHHHHHhhc
Q psy14014 541 VTANFLLPT-VLNM-AGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKLN-GDTDVDVKYFAQEAISSIADS 614 (615)
Q Consensus 541 ~~~~~i~~~-l~~~-~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~l~-~d~d~~v~~~a~~a~~~~~~~ 614 (615)
.+...+... +.++ .+|.|.+||..|+.++++++..+++ .....+..++..++ .=.++-.|..|..|+-.++.|
T Consensus 564 ~~v~~m~~~tl~rL~a~d~DqeVkeraIscmgq~i~~fgD-~l~~eL~~~L~il~eRl~nEiTRl~AvkAlt~Ia~S 639 (1233)
T KOG1824|consen 564 PYVKTMYDCTLQRLKATDSDQEVKERAISCMGQIIANFGD-FLGNELPRTLPILLERLGNEITRLTAVKALTLIAMS 639 (1233)
T ss_pred hhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHhh-hhhhhhHHHHHHHHHHHhchhHHHHHHHHHHHHHhc
Confidence 122223332 3333 3799999999999999999988873 22233333333331 112456788899999988876
No 18
>COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion]
Probab=99.88 E-value=2.4e-17 Score=157.90 Aligned_cols=574 Identities=12% Similarity=0.072 Sum_probs=373.4
Q ss_pred HHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcH--HHHHHHHHHhccccCCCCCcchh---hhchH
Q psy14014 19 IDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDED--EVLLALAEQLGTFTPNVGGPEYV---HCLLP 93 (615)
Q Consensus 19 l~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~--~vr~~a~~~l~~l~~~~~~~~~~---~~l~~ 93 (615)
+..|+|+.|..-..|.+.++.++..--|...|+.+...+.+...++. .+++.+...+|...+....+... +.++.
T Consensus 100 l~aL~s~epr~~~~Aaql~aaIA~~Elp~~~wp~lm~~mv~nvg~eqp~~~k~~sl~~~gy~ces~~Pe~li~~sN~il~ 179 (858)
T COG5215 100 LRALKSPEPRFCTMAAQLLAAIARMELPNSLWPGLMEEMVRNVGDEQPVSGKCESLGICGYHCESEAPEDLIQMSNVILF 179 (858)
T ss_pred HHHhcCCccHHHHHHHHHHHHHHHhhCccccchHHHHHHHHhccccCchHhHHHHHHHHHHHhhccCHHHHHHHhhHHHH
Confidence 45688999998889999999998866566688888888887777655 37888888888877644321111 22222
Q ss_pred HHhhh--hcCchhHHHHHHHHHHHHHHhh----cChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhh----ccCCChh
Q psy14014 94 PLESL--ATVEETVVRDKAVESLRLISAQ----HSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVC----YPRVTAG 163 (615)
Q Consensus 94 ~l~~l--~~~~~~~vr~~a~~~l~~l~~~----~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~----~~~~~~~ 163 (615)
.+... ...++..||..|+.+|..-+.. +..+.-.+++++..+..-+.++.+....+..++..+ |..++..
T Consensus 180 aiv~ga~k~et~~avRLaaL~aL~dsl~fv~~nf~~E~erNy~mqvvceatq~~d~e~q~aafgCl~kim~LyY~fm~~y 259 (858)
T COG5215 180 AIVMGALKNETTSAVRLAALKALMDSLMFVQGNFCYEEERNYFMQVVCEATQGNDEELQHAAFGCLNKIMMLYYKFMQSY 259 (858)
T ss_pred HHHHhhcccCchHHHHHHHHHHHHHHHHHHHHhhcchhhhchhheeeehhccCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222 2345778999999988873333 333455677888888877777777777777776655 3444556
Q ss_pred hHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHh----------ch---------hhhHhhhHHHHHHhhc-------c
Q psy14014 164 VKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVV----------EV---------DYLKTDIIPMFVNLAQ-------D 217 (615)
Q Consensus 164 ~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~----------~~---------~~~~~~ll~~l~~~~~-------d 217 (615)
+.+-+..+..+.+..++.+|.-.+++....+++.- +. .....+++|.++.++. +
T Consensus 260 mE~aL~alt~~~mks~nd~va~qavEfWsticeEeid~~~e~~~~pe~p~qn~~fa~aav~dvlP~lL~LL~~q~ed~~~ 339 (858)
T COG5215 260 MENALAALTGRFMKSQNDEVAIQAVEFWSTICEEEIDGEMEDKYLPEVPAQNHGFARAAVADVLPELLSLLEKQGEDYYG 339 (858)
T ss_pred HHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhhhHHHHhhcccCchhhcchHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 66667777788889999999999999998777531 10 0113568888888874 3
Q ss_pred CchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCcc---chhhhHHHHHHHhhc
Q psy14014 218 EQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPE---ITKTDLVQAFQMLLK 294 (615)
Q Consensus 218 ~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~---~~~~~l~~~l~~~l~ 294 (615)
++|.+..+|..||.-+++..++....+ ++..+.+-+..++|.-|.+++.+||.+...-.+. ...++.+|.+.....
T Consensus 340 DdWn~smaA~sCLqlfaq~~gd~i~~p-Vl~FvEqni~~~~w~nreaavmAfGSvm~gp~~~~lT~~V~qalp~i~n~m~ 418 (858)
T COG5215 340 DDWNPSMAASSCLQLFAQLKGDKIMRP-VLGFVEQNIRSESWANREAAVMAFGSVMHGPCEDCLTKIVPQALPGIENEMS 418 (858)
T ss_pred cccchhhhHHHHHHHHHHHhhhHhHHH-HHHHHHHhccCchhhhHHHHHHHhhhhhcCccHHHHHhhHHhhhHHHHHhcc
Confidence 478899999999999999888876555 7788888899999999999999999987643222 134578899999999
Q ss_pred CCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHH---hhCCCCHHHHHHHHHHHHhhchhhcch---------h
Q psy14014 295 DSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKD---LVADPNQHVKSALASVIMGLSPILGKH---------N 362 (615)
Q Consensus 295 d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~---~~~d~~~~vR~~~~~~l~~l~~~~g~~---------~ 362 (615)
|+.-.|+..++.+++.+..++........ .+.+.... .+.| .+.+-.++++....++..+.+. .
T Consensus 419 D~~l~vk~ttAwc~g~iad~va~~i~p~~---Hl~~~vsa~liGl~D-~p~~~~ncsw~~~nlv~h~a~a~~~~~S~l~~ 494 (858)
T COG5215 419 DSCLWVKSTTAWCFGAIADHVAMIISPCG---HLVLEVSASLIGLMD-CPFRSINCSWRKENLVDHIAKAVREVESFLAK 494 (858)
T ss_pred cceeehhhHHHHHHHHHHHHHHHhcCccc---cccHHHHHHHhhhhc-cchHHhhhHHHHHhHHHhhhhhhccccchhHH
Confidence 99999999999999999887643221111 12222222 2232 4555556666666665554331 1
Q ss_pred hhhhhHHHHHHhh--cCCChhHHHHHHHhhhHhhhhhchhHHHHHH----------------------------------
Q psy14014 363 TVDHLLPLFLSQL--KDECPEVRLNIISNLDCVNEVIGIQQWRVRL---------------------------------- 406 (615)
Q Consensus 363 ~~~~l~p~l~~~l--~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~---------------------------------- 406 (615)
+...++..+++.. .+.+.+.|..++++|+.++....+.......
T Consensus 495 fY~ai~~~Lv~~t~~~~Ne~n~R~s~fsaLgtli~~~~d~V~~~~a~~~~~~~~kl~~~isv~~q~l~~eD~~~~~elqS 574 (858)
T COG5215 495 FYLAILNALVKGTELALNESNLRVSLFSALGTLILICPDAVSDILAGFYDYTSKKLDECISVLGQILATEDQLLVEELQS 574 (858)
T ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Confidence 2223333333322 2445678999999998886554321110000
Q ss_pred HHHhhhhhhhhccccch--hhhhhhhHHHHHhhhcC-CchHHHHHHHHhHHHHhhhChHh--HHHHHHHHHHHhcCCcch
Q psy14014 407 AIIEYMPLLAGQLGVEF--FDEKLNALSIVELAEDS-KWRVRLAIIEYMPLLAGQLGVEF--FDEKLNALCMTWLVDHVY 481 (615)
Q Consensus 407 ~i~~~l~~l~~~~~~~~--~~~~l~~~~i~~~~~~~-~~~vr~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l~d~~~ 481 (615)
.++.++..+..+.+++. ..+.+. ..+...++.. ...+-.....+++.+...+|..| +.+.++|++.+.++..+.
T Consensus 575 N~~~vl~aiir~~~~~ie~v~D~lm-~Lf~r~les~~~t~~~~dV~~aIsal~~sl~e~Fe~y~~~fiPyl~~aln~~d~ 653 (858)
T COG5215 575 NYIGVLEAIIRTRRRDIEDVEDQLM-ELFIRILESTKPTTAFGDVYTAISALSTSLEERFEQYASKFIPYLTRALNCTDR 653 (858)
T ss_pred HHHHHHHHHHHhcCCCcccHHHHHH-HHHHHHHhccCCchhhhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcchhH
Confidence 01112222223333311 112122 2445555554 33344566777888888887754 668899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhChHHh--hhchhHHHHhhhcCC--CchHHHHHHHHHHHHHhhhChhh--HHHhhHHHHHhhCC
Q psy14014 482 AIREAATLNLKKLVEQFGSEWA--QSTVIPKVVAMSRDQ--NYLHRMTCLFCINVLAEACGPTV--TANFLLPTVLNMAG 555 (615)
Q Consensus 482 ~vR~~a~~~l~~l~~~~~~~~~--~~~i~~~l~~~~~d~--~~~~R~~a~~~l~~l~~~~~~~~--~~~~i~~~l~~~~~ 555 (615)
.|-..|+..++.+++.+|.++. ...+...|.+.+.++ ...++-..+.++|.|+-.+|-.+ +.+.++-.+.+..+
T Consensus 654 ~v~~~avglvgdlantl~~df~~y~d~~ms~LvQ~lss~~~~R~lKPaiLSvFgDIAlaiga~F~~YL~~im~L~qqas~ 733 (858)
T COG5215 654 FVLNSAVGLVGDLANTLGTDFNIYADVLMSSLVQCLSSEATHRDLKPAILSVFGDIALAIGANFESYLDMIMMLFQQASE 733 (858)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcChhhccccchHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence 9999999999999999998753 355777888887776 34566678889999998887664 33445544444321
Q ss_pred -CC----------CchHHHHHHHHHHHHhHhhh--hhhHHhhHHHHHhhh---cCCCCc
Q psy14014 556 -DN----------VANVRFNVAKTLQKIGPILE--TNVIQSQVKPALDKL---NGDTDV 598 (615)
Q Consensus 556 -D~----------~~~vr~~a~~~l~~l~~~~~--~~~~~~~~~~~l~~l---~~d~d~ 598 (615)
|+ ..+++..+..++-.|..... .+...+++..+...+ ..|++.
T Consensus 734 ~~p~~~~~~~~dy~~~~~~~v~~ayVgI~~~~~nr~~~v~Pyv~sif~~i~~iaeDp~~ 792 (858)
T COG5215 734 LDPHSDEVYVDDYRKNAVQLVNCAYVGIGDSSKNRVRSVLPYVISIFHKIGMIAEDPNG 792 (858)
T ss_pred cCCCCCceeHHHHHHHHHHHHHHHHHHhhhhhhhhHHHhhhHHHHHHHHHHHhhcCCcc
Confidence 11 11334444444444444333 234556666666655 456544
No 19
>KOG1242|consensus
Probab=99.86 E-value=1.3e-17 Score=163.31 Aligned_cols=521 Identities=13% Similarity=0.098 Sum_probs=364.9
Q ss_pred hhhhhhhcCCcHH-HHHHHHHHhccccCCCCCcchhhhchHHHhhhhcC-chhHHHHHHHHHHHHHHhhcChhHHhhh-H
Q psy14014 54 IPFLTETIYDEDE-VLLALAEQLGTFTPNVGGPEYVHCLLPPLESLATV-EETVVRDKAVESLRLISAQHSPHDLEAH-F 130 (615)
Q Consensus 54 l~~l~~~~~~~~~-vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~l~~~-~~~~vr~~a~~~l~~l~~~~~~~~~~~~-~ 130 (615)
++++..--+|... ||....++........ +.+....+.|.+.+.++. .++.+|+.-..-.+.++.++...+...+ +
T Consensus 19 ~~~~~~~g~d~~~~v~~~ml~a~~~~~~~~-~~~~v~~l~~~~~~~l~~~~~~~~~~~~~v~~~~~a~~~~~~d~~~~~~ 97 (569)
T KOG1242|consen 19 LLFLVSAGEDRRIDVRGNMLEAGEAAINQH-GDQNVLNLKPCFEQRLNSLHNDNLRNNVVVLEGTLAFHLQIVDPRPISI 97 (569)
T ss_pred ceeecccCCCcchhhHHhHHHHHHHHHHhh-hHHHHHHHHHHHHHHhccchhHHHhhhhHHHHHHHHHhccccCcchhHH
Confidence 4555433345443 7776666555544433 356677788888776544 4788999998888888888876544332 4
Q ss_pred HHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhh-hHhhhHH
Q psy14014 131 VPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDY-LKTDIIP 209 (615)
Q Consensus 131 l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~-~~~~ll~ 209 (615)
+..+..-.+.+...++.+...+++.+..........++.+.+.+++...+-.-|+.++..+..+.+..+.+. ....++.
T Consensus 98 ~~~~~~~~~tps~~~q~~~~~~l~~~~~~~~~~~~~~~l~~l~~ll~~~~~~~~~~aa~~~ag~v~g~~i~~~~~~~~l~ 177 (569)
T KOG1242|consen 98 IEILLEELDTPSKSVQRAVSTCLPPLVVLSKGLSGEYVLELLLELLTSTKIAERAGAAYGLAGLVNGLGIESLKEFGFLD 177 (569)
T ss_pred HHHHHHhcCCCcHHHHHHHHHHhhhHHHHhhccCHHHHHHHHHHHhccccHHHHhhhhHHHHHHHcCcHHhhhhhhhHHH
Confidence 444444555567788888888888776666666667777778888887777888888888877776554432 2346777
Q ss_pred HHHHhhccCchhHHH-HHHHHHHHHHhhcChh--hHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHH
Q psy14014 210 MFVNLAQDEQDSVRL-LAVEACVSIASLLSQS--DVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLV 286 (615)
Q Consensus 210 ~l~~~~~d~~~~vr~-~a~~~l~~l~~~~~~~--~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~ 286 (615)
.+....+|.+...++ .+..++......+|+. .+...++|.+.....|....||.++..+.-.+...+.... ...++
T Consensus 178 ~l~~ai~dk~~~~~re~~~~a~~~~~~~Lg~~~EPyiv~~lp~il~~~~d~~~~Vr~Aa~~a~kai~~~~~~~a-VK~ll 256 (569)
T KOG1242|consen 178 NLSKAIIDKKSALNREAALLAFEAAQGNLGPPFEPYIVPILPSILTNFGDKINKVREAAVEAAKAIMRCLSAYA-VKLLL 256 (569)
T ss_pred HHHHHhcccchhhcHHHHHHHHHHHHHhcCCCCCchHHhhHHHHHHHhhccchhhhHHHHHHHHHHHHhcCcch-hhHhh
Confidence 788888887765544 6788888888888842 2333456667777889999999999999888888776543 34566
Q ss_pred HHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhh
Q psy14014 287 QAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDH 366 (615)
Q Consensus 287 ~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~ 366 (615)
|.++..+.+..|.-+.+++..++.+...-+. ......+.++|.+.+.+.|..+.||.++.+++..++.++.... .+.
T Consensus 257 psll~~l~~~kWrtK~aslellg~m~~~ap~--qLs~~lp~iiP~lsevl~DT~~evr~a~~~~l~~~~svidN~d-I~~ 333 (569)
T KOG1242|consen 257 PSLLGSLLEAKWRTKMASLELLGAMADCAPK--QLSLCLPDLIPVLSEVLWDTKPEVRKAGIETLLKFGSVIDNPD-IQK 333 (569)
T ss_pred hhhHHHHHHHhhhhHHHHHHHHHHHHHhchH--HHHHHHhHhhHHHHHHHccCCHHHHHHHHHHHHHHHHhhccHH-HHH
Confidence 6666555555888889999999977764432 2345788999999999999999999999999999988776544 566
Q ss_pred hHHHHHHhhcCCChhHHHHHHHhhh--HhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchH
Q psy14014 367 LLPLFLSQLKDECPEVRLNIISNLD--CVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRV 444 (615)
Q Consensus 367 l~p~l~~~l~d~~~~vr~~a~~~l~--~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~v 444 (615)
++|.+..++.|+...+.... ..|+ .++..+....+. .+. |.+...+.+.+...
T Consensus 334 ~ip~Lld~l~dp~~~~~e~~-~~L~~ttFV~~V~~psLa-----------------------lmv-piL~R~l~eRst~~ 388 (569)
T KOG1242|consen 334 IIPTLLDALADPSCYTPECL-DSLGATTFVAEVDAPSLA-----------------------LMV-PILKRGLAERSTSI 388 (569)
T ss_pred HHHHHHHHhcCcccchHHHH-HhhcceeeeeeecchhHH-----------------------HHH-HHHHHHHhhccchh
Confidence 88999999998764544332 2221 122222211111 111 77888888888888
Q ss_pred HHHHHHHhHHHHhhh-ChHh---HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCC-C
Q psy14014 445 RLAIIEYMPLLAGQL-GVEF---FDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQ-N 519 (615)
Q Consensus 445 r~~~~~~l~~l~~~~-~~~~---~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~-~ 519 (615)
+..++..++.+++.. .+.+ |.+.++|-+...+.|..+++|..+.++++.+.+..|...+ ...+|.+.....+. .
T Consensus 389 kr~t~~IidNm~~LveDp~~lapfl~~Llp~lk~~~~d~~PEvR~vaarAL~~l~e~~g~~~f-~d~~p~l~e~~~~~k~ 467 (569)
T KOG1242|consen 389 KRKTAIIIDNMCKLVEDPKDLAPFLPSLLPGLKENLDDAVPEVRAVAARALGALLERLGEVSF-DDLIPELSETLTSEKS 467 (569)
T ss_pred hhhHHHHHHHHHHhhcCHHHHhhhHHHHhhHHHHHhcCCChhHHHHHHHHHHHHHHHHHhhcc-cccccHHHHhhccchh
Confidence 899999999999877 3332 5567888888888899999999999999999999998755 67899999877655 5
Q ss_pred chHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhC--CCCCchHHHHHHHHHHHHh---HhhhhhhHHhhHHHHHhhhcC
Q psy14014 520 YLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMA--GDNVANVRFNVAKTLQKIG---PILETNVIQSQVKPALDKLNG 594 (615)
Q Consensus 520 ~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~--~D~~~~vr~~a~~~l~~l~---~~~~~~~~~~~~~~~l~~l~~ 594 (615)
...|..++..++.+....+.+.+.. ++|.+.... ...++.+|....+.+.-+- .....++..+.+.++++.+ .
T Consensus 468 ~~~~~g~aq~l~evl~~~~v~~~~~-~~~~~~a~~~~~~~~~~~~dg~~~~~~~lp~~~~~~~~~yi~~i~~~~~k~~-a 545 (569)
T KOG1242|consen 468 LVDRSGAAQDLSEVLAGLGVEKVED-ILPEILANASSVLIDERIRDGVIWLFYLLPYIFGFQFQPYIHEILDEFLKGL-A 545 (569)
T ss_pred hhhhHHHhhhHHHHHhcccchHHHH-HHHHHHHHHhhccchhhhccCeeehhhccchhhhHHhHHHHHHHHHHHHHHh-h
Confidence 5679999999999988777665443 444444432 2334456666555543332 2222345566666666666 5
Q ss_pred CCCccHHHHHHHH
Q psy14014 595 DTDVDVKYFAQEA 607 (615)
Q Consensus 595 d~d~~v~~~a~~a 607 (615)
|.|+.++..+.++
T Consensus 546 d~de~~~~~~~~~ 558 (569)
T KOG1242|consen 546 DNDEKGRDTALEA 558 (569)
T ss_pred hcCCccccchhhh
Confidence 9999998887765
No 20
>KOG1242|consensus
Probab=99.86 E-value=5.4e-18 Score=166.02 Aligned_cols=517 Identities=16% Similarity=0.153 Sum_probs=360.9
Q ss_pred cCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcH--HHHHHHHHHhccccCCCCC-cchhhhchHHHhhhh
Q psy14014 23 KNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDED--EVLLALAEQLGTFTPNVGG-PEYVHCLLPPLESLA 99 (615)
Q Consensus 23 ~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~--~vr~~a~~~l~~l~~~~~~-~~~~~~l~~~l~~l~ 99 (615)
.++.+.+|..-+++....-..-|.+ ....+.|..-+.++... .+|.......|.++..... ......++..+..-+
T Consensus 27 ~d~~~~v~~~ml~a~~~~~~~~~~~-~v~~l~~~~~~~l~~~~~~~~~~~~~v~~~~~a~~~~~~d~~~~~~~~~~~~~~ 105 (569)
T KOG1242|consen 27 EDRRIDVRGNMLEAGEAAINQHGDQ-NVLNLKPCFEQRLNSLHNDNLRNNVVVLEGTLAFHLQIVDPRPISIIEILLEEL 105 (569)
T ss_pred CCcchhhHHhHHHHHHHHHHhhhHH-HHHHHHHHHHHHhccchhHHHhhhhHHHHHHHHHhccccCcchhHHHHHHHHhc
Confidence 4556667777777666665555554 55677777777665433 3888887777777765433 223344555555556
Q ss_pred cCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCCh--hhHHHHHHHHHHHhC
Q psy14014 100 TVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTA--GVKAELRSHFRNLCQ 177 (615)
Q Consensus 100 ~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~--~~~~~l~~~l~~l~~ 177 (615)
+.+.+.+|+....++..+...... .-...+++.+.++...+....|..++.-+..+...... .....++..+....+
T Consensus 106 ~tps~~~q~~~~~~l~~~~~~~~~-~~~~~~l~~l~~ll~~~~~~~~~~aa~~~ag~v~g~~i~~~~~~~~l~~l~~ai~ 184 (569)
T KOG1242|consen 106 DTPSKSVQRAVSTCLPPLVVLSKG-LSGEYVLELLLELLTSTKIAERAGAAYGLAGLVNGLGIESLKEFGFLDNLSKAII 184 (569)
T ss_pred CCCcHHHHHHHHHHhhhHHHHhhc-cCHHHHHHHHHHHhccccHHHHhhhhHHHHHHHcCcHHhhhhhhhHHHHHHHHhc
Confidence 777889999988888876655433 22345677777777776677777777766666655532 223456677777778
Q ss_pred CCChH-HHHHHHHhHHHHHHHhch--hhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhc
Q psy14014 178 DDTPM-VRRAAAGKLGELAKVVEV--DYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCS 254 (615)
Q Consensus 178 d~~~~-vR~~a~~~l~~l~~~~~~--~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~ 254 (615)
|.... .|..+..++...+..+++ +++.-.++|.+..-..|....||.+|..+...+...++.......+.+.+..+.
T Consensus 185 dk~~~~~re~~~~a~~~~~~~Lg~~~EPyiv~~lp~il~~~~d~~~~Vr~Aa~~a~kai~~~~~~~aVK~llpsll~~l~ 264 (569)
T KOG1242|consen 185 DKKSALNREAALLAFEAAQGNLGPPFEPYIVPILPSILTNFGDKINKVREAAVEAAKAIMRCLSAYAVKLLLPSLLGSLL 264 (569)
T ss_pred ccchhhcHHHHHHHHHHHHHhcCCCCCchHHhhHHHHHHHhhccchhhhHHHHHHHHHHHHhcCcchhhHhhhhhHHHHH
Confidence 86544 444566666777777765 444556667667777799999999999999999999887664444444444444
Q ss_pred CCCChHHHHHHHHHHHHHHHHhCccc--hhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHH
Q psy14014 255 GDTSWRVRYMVADKFTDLQKAVGPEI--TKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYV 332 (615)
Q Consensus 255 ~d~~~~vR~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l 332 (615)
++ .|+.+.++++.+|.++...+... ..+.++|.+...+.|..++||+++..++..++..+.+.. ...++|.+
T Consensus 265 ~~-kWrtK~aslellg~m~~~ap~qLs~~lp~iiP~lsevl~DT~~evr~a~~~~l~~~~svidN~d-----I~~~ip~L 338 (569)
T KOG1242|consen 265 EA-KWRTKMASLELLGAMADCAPKQLSLCLPDLIPVLSEVLWDTKPEVRKAGIETLLKFGSVIDNPD-----IQKIIPTL 338 (569)
T ss_pred HH-hhhhHHHHHHHHHHHHHhchHHHHHHHhHhhHHHHHHHccCCHHHHHHHHHHHHHHHHhhccHH-----HHHHHHHH
Confidence 44 99999999999999888766553 356899999999999999999999999999998776543 56788999
Q ss_pred HHhhCCCCHHHHHHHHHHH-HhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhh
Q psy14014 333 KDLVADPNQHVKSALASVI-MGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEY 411 (615)
Q Consensus 333 ~~~~~d~~~~vR~~~~~~l-~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~ 411 (615)
.+.+.|++.++..+.-... ..++..+. ......++|.+...+.+++.+.+..++..++.+.....+..|- ..|
T Consensus 339 ld~l~dp~~~~~e~~~~L~~ttFV~~V~-~psLalmvpiL~R~l~eRst~~kr~t~~IidNm~~LveDp~~l-----apf 412 (569)
T KOG1242|consen 339 LDALADPSCYTPECLDSLGATTFVAEVD-APSLALMVPILKRGLAERSTSIKRKTAIIIDNMCKLVEDPKDL-----APF 412 (569)
T ss_pred HHHhcCcccchHHHHHhhcceeeeeeec-chhHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhcCHHHH-----hhh
Confidence 9999999866654432111 11111111 2345578899999999999999998888888777766444332 233
Q ss_pred hhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCc-chHHHHHHHHH
Q psy14014 412 MPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDH-VYAIREAATLN 490 (615)
Q Consensus 412 l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~-~~~vR~~a~~~ 490 (615)
+|.|. |.+...+.+..+.+|..+..+++.+.+..|...+ +...|.++..+.+. ...-|..+...
T Consensus 413 l~~Ll--------------p~lk~~~~d~~PEvR~vaarAL~~l~e~~g~~~f-~d~~p~l~e~~~~~k~~~~~~g~aq~ 477 (569)
T KOG1242|consen 413 LPSLL--------------PGLKENLDDAVPEVRAVAARALGALLERLGEVSF-DDLIPELSETLTSEKSLVDRSGAAQD 477 (569)
T ss_pred HHHHh--------------hHHHHHhcCCChhHHHHHHHHHHHHHHHHHhhcc-cccccHHHHhhccchhhhhhHHHhhh
Confidence 44333 7777788888899999999999999999998766 77888888887655 44567888888
Q ss_pred HHHHHHHhChHHhhhchhHHHHhhhc--CCCchHHHHHHHHHHHHHhhhCh--hhHHHhhHHHHHhhCCCCCchHHHHHH
Q psy14014 491 LKKLVEQFGSEWAQSTVIPKVVAMSR--DQNYLHRMTCLFCINVLAEACGP--TVTANFLLPTVLNMAGDNVANVRFNVA 566 (615)
Q Consensus 491 l~~l~~~~~~~~~~~~i~~~l~~~~~--d~~~~~R~~a~~~l~~l~~~~~~--~~~~~~i~~~l~~~~~D~~~~vr~~a~ 566 (615)
++.+....|.+.. ..++|.+..... ...+++|...++.+.-+-...+. ..+...+++.+.+.+.|.++.+|..+.
T Consensus 478 l~evl~~~~v~~~-~~~~~~~~a~~~~~~~~~~~~dg~~~~~~~lp~~~~~~~~~yi~~i~~~~~k~~ad~de~~~~~~~ 556 (569)
T KOG1242|consen 478 LSEVLAGLGVEKV-EDILPEILANASSVLIDERIRDGVIWLFYLLPYIFGFQFQPYIHEILDEFLKGLADNDEKGRDTAL 556 (569)
T ss_pred HHHHHhcccchHH-HHHHHHHHHHHhhccchhhhccCeeehhhccchhhhHHhHHHHHHHHHHHHHHhhhcCCccccchh
Confidence 9988888887643 456777666433 34556777666655544333332 223456778888888899999988776
Q ss_pred HHH
Q psy14014 567 KTL 569 (615)
Q Consensus 567 ~~l 569 (615)
.+=
T Consensus 557 ~~~ 559 (569)
T KOG1242|consen 557 EAG 559 (569)
T ss_pred hhh
Confidence 653
No 21
>COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion]
Probab=99.82 E-value=3.5e-15 Score=143.31 Aligned_cols=549 Identities=13% Similarity=0.085 Sum_probs=353.1
Q ss_pred hhccchhhhhhhcCCcHH-HHHHHHHHhccccCCCCCcchhhhchHHHhhhhcCchh-HHHHHHHHHHHHHHhhcChhHH
Q psy14014 49 TRGELIPFLTETIYDEDE-VLLALAEQLGTFTPNVGGPEYVHCLLPPLESLATVEET-VVRDKAVESLRLISAQHSPHDL 126 (615)
Q Consensus 49 ~~~~ll~~l~~~~~~~~~-vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~l~~~~~~-~vr~~a~~~l~~l~~~~~~~~~ 126 (615)
.++++-....+.+.+..+ .-.++++.++.+++.--....|+.++..+.....++++ .++..++.+++..++...++.+
T Consensus 91 ~k~qvK~~al~aL~s~epr~~~~Aaql~aaIA~~Elp~~~wp~lm~~mv~nvg~eqp~~~k~~sl~~~gy~ces~~Pe~l 170 (858)
T COG5215 91 SKEQVKGMALRALKSPEPRFCTMAAQLLAAIARMELPNSLWPGLMEEMVRNVGDEQPVSGKCESLGICGYHCESEAPEDL 170 (858)
T ss_pred HHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHhhCccccchHHHHHHHHhccccCchHhHHHHHHHHHHHhhccCHHHH
Confidence 555555555556666664 66778888888887533456788888888888888766 6888999999999999888655
Q ss_pred hhh---HHHHHHH--hhcCCCcchhhhHHhhhhhhccCC-----ChhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHH
Q psy14014 127 EAH---FVPLVQR--LASGDWFTSRTSACGLFSVCYPRV-----TAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAK 196 (615)
Q Consensus 127 ~~~---~l~~l~~--l~~~~~~~~r~~a~~~l~~~~~~~-----~~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~ 196 (615)
... ++-.+.. ..+.+...+|..|.+.+..-+..+ .+..+++++.......+.++.++..++..++..+..
T Consensus 171 i~~sN~il~aiv~ga~k~et~~avRLaaL~aL~dsl~fv~~nf~~E~erNy~mqvvceatq~~d~e~q~aafgCl~kim~ 250 (858)
T COG5215 171 IQMSNVILFAIVMGALKNETTSAVRLAALKALMDSLMFVQGNFCYEEERNYFMQVVCEATQGNDEELQHAAFGCLNKIMM 250 (858)
T ss_pred HHHhhHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHhhcchhhhchhheeeehhccCCcHHHHHHHHHHHHHHHH
Confidence 432 2222222 223345678888877654322121 345567788888888888999999998888877754
Q ss_pred Hhc---hhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhc----------Chh---------hHHHhHHHHHHHhc
Q psy14014 197 VVE---VDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLL----------SQS---------DVEQLVMPTLRQCS 254 (615)
Q Consensus 197 ~~~---~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~----------~~~---------~~~~~l~~~l~~~~ 254 (615)
..- +....+.+.....+..++++++|...|++.|+.+++.- +.. .-...++|.+.+++
T Consensus 251 LyY~fm~~ymE~aL~alt~~~mks~nd~va~qavEfWsticeEeid~~~e~~~~pe~p~qn~~fa~aav~dvlP~lL~LL 330 (858)
T COG5215 251 LYYKFMQSYMENALAALTGRFMKSQNDEVAIQAVEFWSTICEEEIDGEMEDKYLPEVPAQNHGFARAAVADVLPELLSLL 330 (858)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhhhHHHHhhcccCchhhcchHHHHHHHHHHHHHHHH
Confidence 321 12233445566677788999999999999998877632 100 00223667766665
Q ss_pred C-------CCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHh
Q psy14014 255 G-------DTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTY 327 (615)
Q Consensus 255 ~-------d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~ 327 (615)
. +.+|.+-.++..||.-++...|+... ..++....+.++.+++.-|++|..+++.+...- .+.....++++
T Consensus 331 ~~q~ed~~~DdWn~smaA~sCLqlfaq~~gd~i~-~pVl~FvEqni~~~~w~nreaavmAfGSvm~gp-~~~~lT~~V~q 408 (858)
T COG5215 331 EKQGEDYYGDDWNPSMAASSCLQLFAQLKGDKIM-RPVLGFVEQNIRSESWANREAAVMAFGSVMHGP-CEDCLTKIVPQ 408 (858)
T ss_pred HhcCCCccccccchhhhHHHHHHHHHHHhhhHhH-HHHHHHHHHhccCchhhhHHHHHHHhhhhhcCc-cHHHHHhhHHh
Confidence 2 35799999999999999998887643 447777788899999999999999999887632 22222357888
Q ss_pred hHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhh-hhhhHHHHH---HhhcCCChhHHHHHHHhhhHhhhhhchhHHH
Q psy14014 328 ILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNT-VDHLLPLFL---SQLKDECPEVRLNIISNLDCVNEVIGIQQWR 403 (615)
Q Consensus 328 l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~-~~~l~p~l~---~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~ 403 (615)
.+|.+.....|+.-.|+..++++++.++..+..... ..++.+... ..+.| ++.+..++.+....++..+......
T Consensus 409 alp~i~n~m~D~~l~vk~ttAwc~g~iad~va~~i~p~~Hl~~~vsa~liGl~D-~p~~~~ncsw~~~nlv~h~a~a~~~ 487 (858)
T COG5215 409 ALPGIENEMSDSCLWVKSTTAWCFGAIADHVAMIISPCGHLVLEVSASLIGLMD-CPFRSINCSWRKENLVDHIAKAVRE 487 (858)
T ss_pred hhHHHHHhcccceeehhhHHHHHHHHHHHHHHHhcCccccccHHHHHHHhhhhc-cchHHhhhHHHHHhHHHhhhhhhcc
Confidence 999999999999999999999999999876442111 113333332 23444 4555555555554444433221100
Q ss_pred HHHHHHhhhhhhhhccccchhhhhhhhHHHHHh--hhcCCchHHHHHHHHhHHHHhhhChHh------HHHHHHHHHHH-
Q psy14014 404 VRLAIIEYMPLLAGQLGVEFFDEKLNALSIVEL--AEDSKWRVRLAIIEYMPLLAGQLGVEF------FDEKLNALCMT- 474 (615)
Q Consensus 404 ~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~--~~~~~~~vr~~~~~~l~~l~~~~~~~~------~~~~l~~~l~~- 474 (615)
.+.+ -..|+..++. .+.+. ..+.....|.++..+++.+........ +.+.....+-+
T Consensus 488 --------~~S~----l~~fY~ai~~--~Lv~~t~~~~Ne~n~R~s~fsaLgtli~~~~d~V~~~~a~~~~~~~~kl~~~ 553 (858)
T COG5215 488 --------VESF----LAKFYLAILN--ALVKGTELALNESNLRVSLFSALGTLILICPDAVSDILAGFYDYTSKKLDEC 553 (858)
T ss_pred --------ccch----hHHHHHHHHH--HHHHHHHhhccchhHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 0000 0122322221 22221 124456688888888888865433211 12222222111
Q ss_pred ------hc--CCc--chHHHHHHHHHHHHHHHHhChH--HhhhchhHHHHhhhcCCCch-HHHHHHHHHHHHHhhhChhh
Q psy14014 475 ------WL--VDH--VYAIREAATLNLKKLVEQFGSE--WAQSTVIPKVVAMSRDQNYL-HRMTCLFCINVLAEACGPTV 541 (615)
Q Consensus 475 ------~l--~d~--~~~vR~~a~~~l~~l~~~~~~~--~~~~~i~~~l~~~~~d~~~~-~R~~a~~~l~~l~~~~~~~~ 541 (615)
.+ .|. ..++...-+..+..+++..+++ ...+.++..+++.++...+. +-.....+++.++..+++.+
T Consensus 554 isv~~q~l~~eD~~~~~elqSN~~~vl~aiir~~~~~ie~v~D~lm~Lf~r~les~~~t~~~~dV~~aIsal~~sl~e~F 633 (858)
T COG5215 554 ISVLGQILATEDQLLVEELQSNYIGVLEAIIRTRRRDIEDVEDQLMELFIRILESTKPTTAFGDVYTAISALSTSLEERF 633 (858)
T ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHhccCCchhhhHHHHHHHHHHHHHHHHH
Confidence 11 121 3456666677777777777763 22344666677767666443 34456678888887776654
Q ss_pred --HHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhh---hHHhhHHHHHhhhc-CCCCccHHHHHHHHHHHHhhc
Q psy14014 542 --TANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETN---VIQSQVKPALDKLN-GDTDVDVKYFAQEAISSIADS 614 (615)
Q Consensus 542 --~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~---~~~~~~~~~l~~l~-~d~d~~v~~~a~~a~~~~~~~ 614 (615)
+.+.+.|.+.+.++..+..|-..+...++.+...++++ +...-...+++.|. .--+.+++-.....++.+|.-
T Consensus 634 e~y~~~fiPyl~~aln~~d~~v~~~avglvgdlantl~~df~~y~d~~ms~LvQ~lss~~~~R~lKPaiLSvFgDIAla 712 (858)
T COG5215 634 EQYASKFIPYLTRALNCTDRFVLNSAVGLVGDLANTLGTDFNIYADVLMSSLVQCLSSEATHRDLKPAILSVFGDIALA 712 (858)
T ss_pred HHHHhhhhHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcChhhccccchHHHHHHHHHHHH
Confidence 46789999999999999999999999999998887753 22223444455553 333788898888888888753
No 22
>KOG0915|consensus
Probab=99.81 E-value=1.3e-16 Score=168.89 Aligned_cols=548 Identities=17% Similarity=0.167 Sum_probs=352.9
Q ss_pred hhhhhhcCCcHH-HHHHHHHHhccccCCCCC-cc---hhhhchHHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhh
Q psy14014 55 PFLTETIYDEDE-VLLALAEQLGTFTPNVGG-PE---YVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAH 129 (615)
Q Consensus 55 ~~l~~~~~~~~~-vr~~a~~~l~~l~~~~~~-~~---~~~~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~ 129 (615)
..+...+.+.++ +|++.+..|-.++++++. ++ +.+++...+..+++|++.-+++.|...++-+-+.-+...-+..
T Consensus 821 ~~l~~~~~s~nph~R~A~~VWLLs~vq~l~~~~~v~l~~~eI~~aF~~~Lsd~dEf~QDvAsrGlglVYelgd~~~k~~L 900 (1702)
T KOG0915|consen 821 KLLDTLLTSPNPHERQAGCVWLLSLVQYLGQQPEVVLMLKEIQEAFSHLLSDNDEFSQDVASRGLGLVYELGDSSLKKSL 900 (1702)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHhccCchhhhccHHHHHHHHHHhcccHHHHHHHHhcCceEEEecCCchhHHHH
Confidence 334445566665 999999999888888774 22 3466777889999999999999999998876665544333334
Q ss_pred HHHHHHHhhcCCCcchhh------hHHhhhh------------hhccCCChhhHHHHHHHHHHHhCC-CChHHHHHHHHh
Q psy14014 130 FVPLVQRLASGDWFTSRT------SACGLFS------------VCYPRVTAGVKAELRSHFRNLCQD-DTPMVRRAAAGK 190 (615)
Q Consensus 130 ~l~~l~~l~~~~~~~~r~------~a~~~l~------------~~~~~~~~~~~~~l~~~l~~l~~d-~~~~vR~~a~~~ 190 (615)
+-.++..+........+. ..-+.++ .++...++--++.+.-.|+++..+ ..|.-|+.++-.
T Consensus 901 V~sL~~tl~~Gkr~~~~vs~eTelFq~G~Lg~Tp~Gg~isTYKELc~LASdl~qPdLVYKFM~LAnh~A~wnSk~GaAfG 980 (1702)
T KOG0915|consen 901 VDSLVNTLTGGKRKAIKVSEETELFQEGTLGKTPDGGKISTYKELCNLASDLGQPDLVYKFMQLANHNATWNSKKGAAFG 980 (1702)
T ss_pred HHHHHHHHhccccccceeccchhcccCCcCCCCCCCCcchHHHHHHHHHhhcCChHHHHHHHHHhhhhchhhcccchhhc
Confidence 444445555433211111 1112222 112122222346677778888877 689999999999
Q ss_pred HHHHHHHhch--hhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcCh--hhHHHhHHHHHHHhcCCCChHHHHHHH
Q psy14014 191 LGELAKVVEV--DYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQ--SDVEQLVMPTLRQCSGDTSWRVRYMVA 266 (615)
Q Consensus 191 l~~l~~~~~~--~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~--~~~~~~l~~~l~~~~~d~~~~vR~~~~ 266 (615)
++.+++..+. +++...++|-+.++--|++..|+.+....|..+...-.. +.+...++.-+..-+.+..|+||.+++
T Consensus 981 f~~i~~~a~~kl~p~l~kLIPrLyRY~yDP~~~Vq~aM~sIW~~Li~D~k~~vd~y~neIl~eLL~~lt~kewRVReasc 1060 (1702)
T KOG0915|consen 981 FGAIAKQAGEKLEPYLKKLIPRLYRYQYDPDKKVQDAMTSIWNALITDSKKVVDEYLNEILDELLVNLTSKEWRVREASC 1060 (1702)
T ss_pred hHHHHHHHHHhhhhHHHHhhHHHhhhccCCcHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 9999998765 567788999999999999999999999999988654222 344555666666667889999999999
Q ss_pred HHHHHHHHHhCccchhh---hHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccc------cchhHHHHHhhHHHHHH-hh
Q psy14014 267 DKFTDLQKAVGPEITKT---DLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDA------YNQENIIMTYILPYVKD-LV 336 (615)
Q Consensus 267 ~~l~~l~~~~~~~~~~~---~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~------~~~~~~~~~~l~p~l~~-~~ 336 (615)
-++..+...-+.+...+ +++..+.+.+.|-...||++|-++...+.+.+.. ....+.....++|++.. .+
T Consensus 1061 lAL~dLl~g~~~~~~~e~lpelw~~~fRvmDDIKEsVR~aa~~~~~~lsKl~vr~~d~~~~~~~~~~l~~iLPfLl~~gi 1140 (1702)
T KOG0915|consen 1061 LALADLLQGRPFDQVKEKLPELWEAAFRVMDDIKESVREAADKAARALSKLCVRICDVTNGAKGKEALDIILPFLLDEGI 1140 (1702)
T ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCcccHHHHHHHHHHHHhccCc
Confidence 99999887644443333 4555566667788889999876665555543321 12234577889998764 34
Q ss_pred CCCCHHHHHHHHHHHHhhchhhcch--hhhhhhHHHHHHhhcCCChhHHHH-HHHhhhHhhhhh---------chhHHHH
Q psy14014 337 ADPNQHVKSALASVIMGLSPILGKH--NTVDHLLPLFLSQLKDECPEVRLN-IISNLDCVNEVI---------GIQQWRV 404 (615)
Q Consensus 337 ~d~~~~vR~~~~~~l~~l~~~~g~~--~~~~~l~p~l~~~l~d~~~~vr~~-a~~~l~~l~~~~---------~~~~~~~ 404 (615)
-+.-..||+.++..+..+++..|+. .+.+.++|.+......-++.|-.. ++++...=.+.+ +...|+
T Consensus 1141 ms~v~evr~~si~tl~dl~Kssg~~lkP~~~~LIp~ll~~~s~lE~~vLnYls~r~~~~e~ealDt~R~s~aksspmme- 1219 (1702)
T KOG0915|consen 1141 MSKVNEVRRFSIGTLMDLAKSSGKELKPHFPKLIPLLLNAYSELEPQVLNYLSLRLINIETEALDTLRASAAKSSPMME- 1219 (1702)
T ss_pred ccchHHHHHHHHHHHHHHHHhchhhhcchhhHHHHHHHHHccccchHHHHHHHHhhhhhHHHHHHHHHHhhhcCCcHHH-
Confidence 4778999999999999999998873 356678888888777655554322 222211000111 111111
Q ss_pred HHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcC-CchHHHHHHHHhHHHHhhhChHh--HHHHHHHHHHHhcCCcch
Q psy14014 405 RLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDS-KWRVRLAIIEYMPLLAGQLGVEF--FDEKLNALCMTWLVDHVY 481 (615)
Q Consensus 405 ~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~-~~~vr~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l~d~~~ 481 (615)
.+....+.+...- .+.+. |.+.++++.. .-..|-.++..+..++..+|.+. +...++..++..+.|.+.
T Consensus 1220 ------Ti~~ci~~iD~~v-Leeli-p~l~el~R~sVgl~Tkvg~A~fI~~L~~r~~~emtP~sgKll~al~~g~~dRNe 1291 (1702)
T KOG0915|consen 1220 ------TINKCINYIDISV-LEELI-PRLTELVRGSVGLGTKVGCASFISLLVQRLGSEMTPYSGKLLRALFPGAKDRNE 1291 (1702)
T ss_pred ------HHHHHHHhhhHHH-HHHHH-HHHHHHHhccCCCCcchhHHHHHHHHHHHhccccCcchhHHHHHHhhccccccH
Confidence 1111111111111 12333 6777777653 55677888888999999888754 678899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhChHHhhhchhHHHHh-hhcCCCchHHHHHHHHHHHHHhhhCh--hhHHHhhHHHHHhhCCCCC
Q psy14014 482 AIREAATLNLKKLVEQFGSEWAQSTVIPKVVA-MSRDQNYLHRMTCLFCINVLAEACGP--TVTANFLLPTVLNMAGDNV 558 (615)
Q Consensus 482 ~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~-~~~d~~~~~R~~a~~~l~~l~~~~~~--~~~~~~i~~~l~~~~~D~~ 558 (615)
.+|.+-..++|.+++.-+++.... ++..++. .+.+.++.. ..++..+..|+.+... +-....++|.+.-...+.+
T Consensus 1292 sv~kafAsAmG~L~k~Ss~dq~qK-Lie~~l~~~l~k~es~~-siscatis~Ian~s~e~Lkn~asaILPLiFLa~~ee~ 1369 (1702)
T KOG0915|consen 1292 SVRKAFASAMGYLAKFSSPDQMQK-LIETLLADLLGKDESLK-SISCATISNIANYSQEMLKNYASAILPLIFLAMHEEE 1369 (1702)
T ss_pred HHHHHHHHHHHHHHhcCChHHHHH-HHHHHHHHHhccCCCcc-chhHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHhHHH
Confidence 999999999999999877765443 4444444 444444432 5566666655544322 1134668887665554442
Q ss_pred chHHHHHHHHHHHHhHhh-hhh--hHHhhHHHHHhhhcCCCCccHHHHHHHHHHHHhh
Q psy14014 559 ANVRFNVAKTLQKIGPIL-ETN--VIQSQVKPALDKLNGDTDVDVKYFAQEAISSIAD 613 (615)
Q Consensus 559 ~~vr~~a~~~l~~l~~~~-~~~--~~~~~~~~~l~~l~~d~d~~v~~~a~~a~~~~~~ 613 (615)
.+-..-=-+.+..+.+.- +.- +..+.+.+++...+++.-..+|.-+..++..++.
T Consensus 1370 Ka~q~Lw~dvW~e~vsggagtvrl~~~eiLn~iceni~nn~~w~lr~q~Akai~~~a~ 1427 (1702)
T KOG0915|consen 1370 KANQELWNDVWAELVSGGAGTVRLYLLEILNLICENITNNESWKLRKQAAKAIRVIAE 1427 (1702)
T ss_pred HHHHHHHHHHHHHhCCCCcchhhhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHcc
Confidence 222121222333333221 111 3456677777777777778888888887776654
No 23
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional
Probab=99.81 E-value=5.6e-18 Score=186.30 Aligned_cols=275 Identities=23% Similarity=0.255 Sum_probs=218.0
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHH
Q psy14014 246 VMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIM 325 (615)
Q Consensus 246 l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~ 325 (615)
.++.|...++|+++.||..++..|+.+. ....++.|...++|+++.||..|+.+|..+....+.
T Consensus 622 ~~~~L~~~L~D~d~~VR~~Av~~L~~~~--------~~~~~~~L~~aL~D~d~~VR~~Aa~aL~~l~~~~~~-------- 685 (897)
T PRK13800 622 SVAELAPYLADPDPGVRRTAVAVLTETT--------PPGFGPALVAALGDGAAAVRRAAAEGLRELVEVLPP-------- 685 (897)
T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHhhhc--------chhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCc--------
Confidence 4567778889999999999999999864 246788899999999999999999999887653321
Q ss_pred HhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHH
Q psy14014 326 TYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVR 405 (615)
Q Consensus 326 ~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~ 405 (615)
.+.+...++++++.||..++.+|+.+.. +. .+.+...+.|+++.||..|+.+|..+. .
T Consensus 686 ---~~~L~~~L~~~d~~VR~~A~~aL~~~~~--~~-------~~~l~~~L~D~d~~VR~~Av~aL~~~~----~------ 743 (897)
T PRK13800 686 ---APALRDHLGSPDPVVRAAALDVLRALRA--GD-------AALFAAALGDPDHRVRIEAVRALVSVD----D------ 743 (897)
T ss_pred ---hHHHHHHhcCCCHHHHHHHHHHHHhhcc--CC-------HHHHHHHhcCCCHHHHHHHHHHHhccc----C------
Confidence 2456677888999999999999987642 11 235677899999999999999987641 1
Q ss_pred HHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHH
Q psy14014 406 LAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIRE 485 (615)
Q Consensus 406 ~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~ 485 (615)
. +.+...+.|+++.||..++..|+.+...-. ...+.+..+++|+++.||.
T Consensus 744 ------~------------------~~l~~~l~D~~~~VR~~aa~aL~~~~~~~~------~~~~~L~~ll~D~d~~VR~ 793 (897)
T PRK13800 744 ------V------------------ESVAGAATDENREVRIAVAKGLATLGAGGA------PAGDAVRALTGDPDPLVRA 793 (897)
T ss_pred ------c------------------HHHHHHhcCCCHHHHHHHHHHHHHhccccc------hhHHHHHHHhcCCCHHHHH
Confidence 0 244567889999999999999998854211 1356788899999999999
Q ss_pred HHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHH
Q psy14014 486 AATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNV 565 (615)
Q Consensus 486 ~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a 565 (615)
+|+.+|+.+.. . ..+.+.+...+.|++|.+|..|+.+|+.+.. +...+.|..+++|++..||..+
T Consensus 794 aA~~aLg~~g~----~---~~~~~~l~~aL~d~d~~VR~~Aa~aL~~l~~--------~~a~~~L~~~L~D~~~~VR~~A 858 (897)
T PRK13800 794 AALAALAELGC----P---PDDVAAATAALRASAWQVRQGAARALAGAAA--------DVAVPALVEALTDPHLDVRKAA 858 (897)
T ss_pred HHHHHHHhcCC----c---chhHHHHHHHhcCCChHHHHHHHHHHHhccc--------cchHHHHHHHhcCCCHHHHHHH
Confidence 99999988732 1 2345668888999999999999999998741 2356889999999999999999
Q ss_pred HHHHHHHhHhhhhhhHHhhHHHHHhhhcCCCCccHHHHHHHHHHH
Q psy14014 566 AKTLQKIGPILETNVIQSQVKPALDKLNGDTDVDVKYFAQEAISS 610 (615)
Q Consensus 566 ~~~l~~l~~~~~~~~~~~~~~~~l~~l~~d~d~~v~~~a~~a~~~ 610 (615)
+.+|+.+. ..+...+.+..+++|.|.+||..|..||..
T Consensus 859 ~~aL~~~~-------~~~~a~~~L~~al~D~d~~Vr~~A~~aL~~ 896 (897)
T PRK13800 859 VLALTRWP-------GDPAARDALTTALTDSDADVRAYARRALAH 896 (897)
T ss_pred HHHHhccC-------CCHHHHHHHHHHHhCCCHHHHHHHHHHHhh
Confidence 99999961 123456777788899999999999999864
No 24
>PRK09687 putative lyase; Provisional
Probab=99.80 E-value=9.2e-18 Score=157.50 Aligned_cols=253 Identities=17% Similarity=0.167 Sum_probs=195.4
Q ss_pred HHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhh
Q psy14014 286 VQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVD 365 (615)
Q Consensus 286 ~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~ 365 (615)
++.+...+.|++..||..|+.+|+.+.. +.+++.+.++++|+++.+|..++.+|+.+...-. ...
T Consensus 25 ~~~L~~~L~d~d~~vR~~A~~aL~~~~~------------~~~~~~l~~ll~~~d~~vR~~A~~aLg~lg~~~~---~~~ 89 (280)
T PRK09687 25 DDELFRLLDDHNSLKRISSIRVLQLRGG------------QDVFRLAIELCSSKNPIERDIGADILSQLGMAKR---CQD 89 (280)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhcCc------------chHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCcc---chH
Confidence 4557777899999999999999987653 4467788888999999999999999998754211 023
Q ss_pred hhHHHHHHh-hcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchH
Q psy14014 366 HLLPLFLSQ-LKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRV 444 (615)
Q Consensus 366 ~l~p~l~~~-l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~v 444 (615)
..+|.+..+ ++|+++.||..|+.+|+.+.... ..|.... + +.+...+.|++|+|
T Consensus 90 ~a~~~L~~l~~~D~d~~VR~~A~~aLG~~~~~~--~~~~~~a-----~------------------~~l~~~~~D~~~~V 144 (280)
T PRK09687 90 NVFNILNNLALEDKSACVRASAINATGHRCKKN--PLYSPKI-----V------------------EQSQITAFDKSTNV 144 (280)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhcccccc--cccchHH-----H------------------HHHHHHhhCCCHHH
Confidence 467777766 68889999999999998763211 1111111 1 34456678899999
Q ss_pred HHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHH
Q psy14014 445 RLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRM 524 (615)
Q Consensus 445 r~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~ 524 (615)
|..++.+|+.+. .+..++.+...+.|+++.||..|+.+||.+. .+ .+.+.+.|..++.|+++.+|.
T Consensus 145 R~~a~~aLg~~~--------~~~ai~~L~~~L~d~~~~VR~~A~~aLg~~~--~~----~~~~~~~L~~~L~D~~~~VR~ 210 (280)
T PRK09687 145 RFAVAFALSVIN--------DEAAIPLLINLLKDPNGDVRNWAAFALNSNK--YD----NPDIREAFVAMLQDKNEEIRI 210 (280)
T ss_pred HHHHHHHHhccC--------CHHHHHHHHHHhcCCCHHHHHHHHHHHhcCC--CC----CHHHHHHHHHHhcCCChHHHH
Confidence 999999997653 2357788999999999999999999999882 11 235788899999999999999
Q ss_pred HHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHHHHhhhc-CCCCccHHHH
Q psy14014 525 TCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKLN-GDTDVDVKYF 603 (615)
Q Consensus 525 ~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~l~-~d~d~~v~~~ 603 (615)
.|+.+||.+.. ...+|.|.+.++|++ +|..++.+|+.+.. +...|.+..+. .++|..|+..
T Consensus 211 ~A~~aLg~~~~--------~~av~~Li~~L~~~~--~~~~a~~ALg~ig~--------~~a~p~L~~l~~~~~d~~v~~~ 272 (280)
T PRK09687 211 EAIIGLALRKD--------KRVLSVLIKELKKGT--VGDLIIEAAGELGD--------KTLLPVLDTLLYKFDDNEIITK 272 (280)
T ss_pred HHHHHHHccCC--------hhHHHHHHHHHcCCc--hHHHHHHHHHhcCC--------HhHHHHHHHHHhhCCChhHHHH
Confidence 99999999642 357888888888866 78889999999853 34577777775 4889999999
Q ss_pred HHHHHHH
Q psy14014 604 AQEAISS 610 (615)
Q Consensus 604 a~~a~~~ 610 (615)
|.+|++.
T Consensus 273 a~~a~~~ 279 (280)
T PRK09687 273 AIDKLKR 279 (280)
T ss_pred HHHHHhc
Confidence 9999864
No 25
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional
Probab=99.80 E-value=1.6e-17 Score=182.60 Aligned_cols=275 Identities=18% Similarity=0.186 Sum_probs=203.2
Q ss_pred hHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHH
Q psy14014 207 IIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLV 286 (615)
Q Consensus 207 ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~ 286 (615)
-++.+.+.++|+++.||..|+..|+.+. .+..+|.|...++|+++.||..++.+|+.+..... -.
T Consensus 622 ~~~~L~~~L~D~d~~VR~~Av~~L~~~~--------~~~~~~~L~~aL~D~d~~VR~~Aa~aL~~l~~~~~-------~~ 686 (897)
T PRK13800 622 SVAELAPYLADPDPGVRRTAVAVLTETT--------PPGFGPALVAALGDGAAAVRRAAAEGLRELVEVLP-------PA 686 (897)
T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHhhhc--------chhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccC-------ch
Confidence 4556677778999999999988888763 23467777788889999999999888887754322 12
Q ss_pred HHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhh
Q psy14014 287 QAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDH 366 (615)
Q Consensus 287 ~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~ 366 (615)
+.+...++++++.||..|+.+|+.+... . .+.+.+.+.|+++.||..++.+|+.+..
T Consensus 687 ~~L~~~L~~~d~~VR~~A~~aL~~~~~~--~-----------~~~l~~~L~D~d~~VR~~Av~aL~~~~~---------- 743 (897)
T PRK13800 687 PALRDHLGSPDPVVRAAALDVLRALRAG--D-----------AALFAAALGDPDHRVRIEAVRALVSVDD---------- 743 (897)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHhhccC--C-----------HHHHHHHhcCCCHHHHHHHHHHHhcccC----------
Confidence 4566778888899999998888875321 0 1234567889999999999888887522
Q ss_pred hHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHH
Q psy14014 367 LLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRL 446 (615)
Q Consensus 367 l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~ 446 (615)
.+.+...+.|+++.||..++.+|+.+...-.. . + +.+..+++|+++.+|.
T Consensus 744 -~~~l~~~l~D~~~~VR~~aa~aL~~~~~~~~~-----~------~------------------~~L~~ll~D~d~~VR~ 793 (897)
T PRK13800 744 -VESVAGAATDENREVRIAVAKGLATLGAGGAP-----A------G------------------DAVRALTGDPDPLVRA 793 (897)
T ss_pred -cHHHHHHhcCCCHHHHHHHHHHHHHhccccch-----h------H------------------HHHHHHhcCCCHHHHH
Confidence 13456778888999999999988876431110 0 1 4566778888899999
Q ss_pred HHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHH
Q psy14014 447 AIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTC 526 (615)
Q Consensus 447 ~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a 526 (615)
.++..|+.+.. .+...+.+...+.|+++.||..|+.+|+.+. . +..++.|..+++|+++.||..+
T Consensus 794 aA~~aLg~~g~-------~~~~~~~l~~aL~d~d~~VR~~Aa~aL~~l~----~----~~a~~~L~~~L~D~~~~VR~~A 858 (897)
T PRK13800 794 AALAALAELGC-------PPDDVAAATAALRASAWQVRQGAARALAGAA----A----DVAVPALVEALTDPHLDVRKAA 858 (897)
T ss_pred HHHHHHHhcCC-------cchhHHHHHHHhcCCChHHHHHHHHHHHhcc----c----cchHHHHHHHhcCCCHHHHHHH
Confidence 99998887732 1123455778888999999999999987653 1 2456888888899999999999
Q ss_pred HHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHH
Q psy14014 527 LFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQK 571 (615)
Q Consensus 527 ~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~ 571 (615)
+.+|+.+. .+ +...+.|.++++|++++||..|..+|..
T Consensus 859 ~~aL~~~~--~~-----~~a~~~L~~al~D~d~~Vr~~A~~aL~~ 896 (897)
T PRK13800 859 VLALTRWP--GD-----PAARDALTTALTDSDADVRAYARRALAH 896 (897)
T ss_pred HHHHhccC--CC-----HHHHHHHHHHHhCCCHHHHHHHHHHHhh
Confidence 99999982 11 2357778888899999999999998864
No 26
>PTZ00429 beta-adaptin; Provisional
Probab=99.79 E-value=3.3e-14 Score=149.26 Aligned_cols=504 Identities=13% Similarity=0.087 Sum_probs=317.1
Q ss_pred hHHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcH-HHHHHHHHHhccccCCCCCcchhhhch
Q psy14014 14 PIAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDED-EVLLALAEQLGTFTPNVGGPEYVHCLL 92 (615)
Q Consensus 14 ~i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~-~vr~~a~~~l~~l~~~~~~~~~~~~l~ 92 (615)
.+..+.+.|.+.+...|..+++.+-... ..|.+ ...+.+-+..++..++ ++|+.+-.-+..+++. .++..--.+
T Consensus 33 e~~ELr~~L~s~~~~~kk~alKkvIa~m-t~G~D--vS~LF~dVvk~~~S~d~elKKLvYLYL~~ya~~--~pelalLaI 107 (746)
T PTZ00429 33 EGAELQNDLNGTDSYRKKAAVKRIIANM-TMGRD--VSYLFVDVVKLAPSTDLELKKLVYLYVLSTARL--QPEKALLAV 107 (746)
T ss_pred hHHHHHHHHHCCCHHHHHHHHHHHHHHH-HCCCC--chHHHHHHHHHhCCCCHHHHHHHHHHHHHHccc--ChHHHHHHH
Confidence 4677777888888877777777665542 23443 2334444455555555 5777766666555542 122222335
Q ss_pred HHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHH
Q psy14014 93 PPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHF 172 (615)
Q Consensus 93 ~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l 172 (615)
+.|.+-+.|+++.+|-.|+.+++.+.. +.+.+.+.+.+
T Consensus 108 Ntl~KDl~d~Np~IRaLALRtLs~Ir~------------------------------------------~~i~e~l~~~l 145 (746)
T PTZ00429 108 NTFLQDTTNSSPVVRALAVRTMMCIRV------------------------------------------SSVLEYTLEPL 145 (746)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHcCCc------------------------------------------HHHHHHHHHHH
Confidence 556666677788888888776664311 22234445556
Q ss_pred HHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhh-HHHhHHHHHH
Q psy14014 173 RNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSD-VEQLVMPTLR 251 (615)
Q Consensus 173 ~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~-~~~~l~~~l~ 251 (615)
.+.+.|.++.||+.|+-++..+....+.......+++.+.+++.|.++.|...|+.++..+.+..+..- .....+..+.
T Consensus 146 kk~L~D~~pYVRKtAalai~Kly~~~pelv~~~~~~~~L~~LL~D~dp~Vv~nAl~aL~eI~~~~~~~l~l~~~~~~~Ll 225 (746)
T PTZ00429 146 RRAVADPDPYVRKTAAMGLGKLFHDDMQLFYQQDFKKDLVELLNDNNPVVASNAAAIVCEVNDYGSEKIESSNEWVNRLV 225 (746)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHhhCcccccccchHHHHHHHhcCCCccHHHHHHHHHHHHHHhCchhhHHHHHHHHHHH
Confidence 788899999999999999999877655433344677888889999999999999999999876654310 1112223333
Q ss_pred HhcCCCChHHHHHHHHHHHHHHHHhCc-cchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHH
Q psy14014 252 QCSGDTSWRVRYMVADKFTDLQKAVGP-EITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILP 330 (615)
Q Consensus 252 ~~~~d~~~~vR~~~~~~l~~l~~~~~~-~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p 330 (615)
..+.+-+.+-+..+.+.|... .+. +.....++..+...+++.++.|.-+|++.+-.+.....++.. ......+.+
T Consensus 226 ~~L~e~~EW~Qi~IL~lL~~y---~P~~~~e~~~il~~l~~~Lq~~N~AVVl~Aik~il~l~~~~~~~~~-~~~~~rl~~ 301 (746)
T PTZ00429 226 YHLPECNEWGQLYILELLAAQ---RPSDKESAETLLTRVLPRMSHQNPAVVMGAIKVVANLASRCSQELI-ERCTVRVNT 301 (746)
T ss_pred HHhhcCChHHHHHHHHHHHhc---CCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCcCCHHHH-HHHHHHHHH
Confidence 444444444555666655332 111 112346778888888999999999999998877654422211 112223334
Q ss_pred HHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHh
Q psy14014 331 YVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIE 410 (615)
Q Consensus 331 ~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~ 410 (615)
.+..+ ...++.+|-.++..+..+.... +..+.++ +..|....+|+. .||...++.+..++..-....
T Consensus 302 pLv~L-~ss~~eiqyvaLr~I~~i~~~~-P~lf~~~-~~~Ff~~~~Dp~-yIK~~KLeIL~~Lane~Nv~~--------- 368 (746)
T PTZ00429 302 ALLTL-SRRDAETQYIVCKNIHALLVIF-PNLLRTN-LDSFYVRYSDPP-FVKLEKLRLLLKLVTPSVAPE--------- 368 (746)
T ss_pred HHHHh-hCCCccHHHHHHHHHHHHHHHC-HHHHHHH-HHhhhcccCCcH-HHHHHHHHHHHHHcCcccHHH---------
Confidence 44444 4567889999998887776533 2222222 344444556643 578877777765543221111
Q ss_pred hhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHH
Q psy14014 411 YMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLN 490 (615)
Q Consensus 411 ~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~ 490 (615)
.+ ..+.+...+.+..++..++.+++.++..+.. ..+.++..+++++.+...-+ ..++..
T Consensus 369 IL------------------~EL~eYa~d~D~ef~r~aIrAIg~lA~k~~~--~a~~cV~~Ll~ll~~~~~~v-~e~i~v 427 (746)
T PTZ00429 369 IL------------------KELAEYASGVDMVFVVEVVRAIASLAIKVDS--VAPDCANLLLQIVDRRPELL-PQVVTA 427 (746)
T ss_pred HH------------------HHHHHHhhcCCHHHHHHHHHHHHHHHHhChH--HHHHHHHHHHHHhcCCchhH-HHHHHH
Confidence 01 2444555677778999999999999876654 35667778888887654433 356788
Q ss_pred HHHHHHHhChHHhhhchhHHHHhhh---cCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHH
Q psy14014 491 LKKLVEQFGSEWAQSTVIPKVVAMS---RDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAK 567 (615)
Q Consensus 491 l~~l~~~~~~~~~~~~i~~~l~~~~---~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~ 567 (615)
+..+.+..... .+++.+...+ .-.++..|.+.+|.+|+.++..+. ...++..+..-..+..+.||..+..
T Consensus 428 ik~IlrkyP~~----~il~~L~~~~~~~~i~e~~AKaaiiWILGEy~~~I~~---a~~~L~~~i~~f~~E~~~VqlqlLt 500 (746)
T PTZ00429 428 AKDIVRKYPEL----LMLDTLVTDYGADEVVEEEAKVSLLWMLGEYCDFIEN---GKDIIQRFIDTIMEHEQRVQLAILS 500 (746)
T ss_pred HHHHHHHCccH----HHHHHHHHhhcccccccHHHHHHHHHHHHhhHhhHhh---HHHHHHHHHhhhccCCHHHHHHHHH
Confidence 88887765432 2455555432 224778899999999998876532 2233333334445678899999999
Q ss_pred HHHHHhHhhhhhhHHhhHHHHHhhhc-CCCCccHHHHHHHHHHH
Q psy14014 568 TLQKIGPILETNVIQSQVKPALDKLN-GDTDVDVKYFAQEAISS 610 (615)
Q Consensus 568 ~l~~l~~~~~~~~~~~~~~~~l~~l~-~d~d~~v~~~a~~a~~~ 610 (615)
+...+.-..+++ ....+..++..+. .+.|+|||..|..-...
T Consensus 501 a~vKlfl~~p~~-~~~~l~~vL~~~t~~~~d~DVRDRA~~Y~rL 543 (746)
T PTZ00429 501 AAVKMFLRDPQG-MEPQLNRVLETVTTHSDDPDVRDRAFAYWRL 543 (746)
T ss_pred HHHHHHhcCcHH-HHHHHHHHHHHHHhcCCChhHHHHHHHHHHH
Confidence 998887665432 3455677776664 46788999999865443
No 27
>PRK09687 putative lyase; Provisional
Probab=99.79 E-value=2.6e-17 Score=154.50 Aligned_cols=220 Identities=20% Similarity=0.175 Sum_probs=159.0
Q ss_pred HHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHHHHH-hCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHH
Q psy14014 133 LVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNL-CQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMF 211 (615)
Q Consensus 133 ~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~~l-~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l 211 (615)
.+..+.++++..+|..++..++.+-.. .......++.+..+ .+|+++.||..++.+||.++.... ......++.+
T Consensus 58 ~l~~ll~~~d~~vR~~A~~aLg~lg~~--~~~~~~a~~~L~~l~~~D~d~~VR~~A~~aLG~~~~~~~--~~~~~a~~~l 133 (280)
T PRK09687 58 LAIELCSSKNPIERDIGADILSQLGMA--KRCQDNVFNILNNLALEDKSACVRASAINATGHRCKKNP--LYSPKIVEQS 133 (280)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHhcCCC--ccchHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccccc--ccchHHHHHH
Confidence 333344444444444444444443110 00123445555555 689999999999999999854221 1134566677
Q ss_pred HHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHH
Q psy14014 212 VNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQM 291 (615)
Q Consensus 212 ~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~ 291 (615)
...+.|+++.||..++.+|+.+. .+..++.|..+++|++|.||..++.+||.+.. ..+...+.+..
T Consensus 134 ~~~~~D~~~~VR~~a~~aLg~~~--------~~~ai~~L~~~L~d~~~~VR~~A~~aLg~~~~------~~~~~~~~L~~ 199 (280)
T PRK09687 134 QITAFDKSTNVRFAVAFALSVIN--------DEAAIPLLINLLKDPNGDVRNWAAFALNSNKY------DNPDIREAFVA 199 (280)
T ss_pred HHHhhCCCHHHHHHHHHHHhccC--------CHHHHHHHHHHhcCCCHHHHHHHHHHHhcCCC------CCHHHHHHHHH
Confidence 77888999999999999997542 24478889999999999999999999998721 13478889999
Q ss_pred hhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHH
Q psy14014 292 LLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLF 371 (615)
Q Consensus 292 ~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l 371 (615)
.+.|.+++||..|+.+|+.+.. ...+|.|.+.+++++ +|..++.+++.+.. +..+|.+
T Consensus 200 ~L~D~~~~VR~~A~~aLg~~~~------------~~av~~Li~~L~~~~--~~~~a~~ALg~ig~--------~~a~p~L 257 (280)
T PRK09687 200 MLQDKNEEIRIEAIIGLALRKD------------KRVLSVLIKELKKGT--VGDLIIEAAGELGD--------KTLLPVL 257 (280)
T ss_pred HhcCCChHHHHHHHHHHHccCC------------hhHHHHHHHHHcCCc--hHHHHHHHHHhcCC--------HhHHHHH
Confidence 9999999999999999987543 457888888898877 56778888887754 2578999
Q ss_pred HHhhc-CCChhHHHHHHHhhhH
Q psy14014 372 LSQLK-DECPEVRLNIISNLDC 392 (615)
Q Consensus 372 ~~~l~-d~~~~vr~~a~~~l~~ 392 (615)
.++++ +++..|+..+++++.+
T Consensus 258 ~~l~~~~~d~~v~~~a~~a~~~ 279 (280)
T PRK09687 258 DTLLYKFDDNEIITKAIDKLKR 279 (280)
T ss_pred HHHHhhCCChhHHHHHHHHHhc
Confidence 99986 7788999999887653
No 28
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. Clathrin coats contain both clathrin and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors []. All AP complexes are heterotetramers composed of two large subunits (adaptins), a medium subunit (mu) and a small subunit (sigma). Each subunit has a specific function. Adaptin subunits recognise and bind to clathrin through their hinge region (clathrin box), and recruit accessory proteins that modulate AP function through their C-terminal appendage domains. By contrast, GGAs are monomers composed of four domains, which have functions similar to AP subunits: an N-terminal VHS (Vps27p/Hrs/Stam) domain, a GAT (GGA and Tom1) domain, a hinge region, and a C-terminal GAE (gamma-adaptin ear) domain. The GAE domain is similar to the AP gamma-adaptin ear domain, being responsible for the recruitment of accessory proteins that regulate clathrin-mediated endocytosis []. While clathrin mediates endocytic protein transport from ER to Golgi, coatomers (COPI, COPII) primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the N-terminal domain of various adaptins from different AP clathrin adaptor complexes (including AP1, AP2, AP3 and AP4), and from the beta and gamma subunits of various coatomer (COP) adaptors. This domain has a 2-layer alpha/alpha fold that forms a right-handed superhelix, and is a member of the ARM repeat superfamily []. The N-terminal region of the various AP adaptor proteins share strong sequence identity; by contrast, the C-terminal domains of different adaptins share similar structural folds, but have little sequence identity []. It has been proposed that the N-terminal domain interacts with another uniform component of the coated vesicles. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 1W63_C 2JKR_A 2JKT_A 2XA7_A 2VGL_B 3TJZ_E.
Probab=99.79 E-value=4.9e-16 Score=164.21 Aligned_cols=470 Identities=17% Similarity=0.168 Sum_probs=286.1
Q ss_pred hHHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcHH-HHHHHHHHhccccCCCCCcchhhhch
Q psy14014 14 PIAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDEDE-VLLALAEQLGTFTPNVGGPEYVHCLL 92 (615)
Q Consensus 14 ~i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~~-vr~~a~~~l~~l~~~~~~~~~~~~l~ 92 (615)
.....+..+.++|...|..+--.+..+... .++ ...-....+..=+.++++ +|..|.++++.+. .++..+.+.
T Consensus 43 ~~~~vi~l~~s~~~~~Krl~yl~l~~~~~~-~~~-~~~l~~n~l~kdl~~~n~~~~~lAL~~l~~i~----~~~~~~~l~ 116 (526)
T PF01602_consen 43 LFMEVIKLISSKDLELKRLGYLYLSLYLHE-DPE-LLILIINSLQKDLNSPNPYIRGLALRTLSNIR----TPEMAEPLI 116 (526)
T ss_dssp THHHHHCTCSSSSHHHHHHHHHHHHHHTTT-SHH-HHHHHHHHHHHHHCSSSHHHHHHHHHHHHHH-----SHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHhhc-chh-HHHHHHHHHHHhhcCCCHHHHHHHHhhhhhhc----ccchhhHHH
Confidence 445566667788888776666666655321 111 111122223333445554 8999999999876 467788899
Q ss_pred HHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCCh----hhHHHH
Q psy14014 93 PPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTA----GVKAEL 168 (615)
Q Consensus 93 ~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~----~~~~~l 168 (615)
+.+.+++.|+++.||..|+.++.++....++ .+...+.|.+..+..|++..++.+|+.++..+ ..++ .....+
T Consensus 117 ~~v~~ll~~~~~~VRk~A~~~l~~i~~~~p~-~~~~~~~~~l~~lL~d~~~~V~~~a~~~l~~i--~~~~~~~~~~~~~~ 193 (526)
T PF01602_consen 117 PDVIKLLSDPSPYVRKKAALALLKIYRKDPD-LVEDELIPKLKQLLSDKDPSVVSAALSLLSEI--KCNDDSYKSLIPKL 193 (526)
T ss_dssp HHHHHHHHSSSHHHHHHHHHHHHHHHHHCHC-CHHGGHHHHHHHHTTHSSHHHHHHHHHHHHHH--HCTHHHHTTHHHHH
T ss_pred HHHHHHhcCCchHHHHHHHHHHHHHhccCHH-HHHHHHHHHHhhhccCCcchhHHHHHHHHHHH--ccCcchhhhhHHHH
Confidence 9999999999999999999999999888554 22222788888888777788888888877777 2222 234445
Q ss_pred HHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHH
Q psy14014 169 RSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMP 248 (615)
Q Consensus 169 ~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~ 248 (615)
.+.+.+++.+.++..+..+++.+..++..-........+++.+..++++.++.|...++.++..+.. .......+++
T Consensus 194 ~~~L~~~l~~~~~~~q~~il~~l~~~~~~~~~~~~~~~~i~~l~~~l~s~~~~V~~e~~~~i~~l~~---~~~~~~~~~~ 270 (526)
T PF01602_consen 194 IRILCQLLSDPDPWLQIKILRLLRRYAPMEPEDADKNRIIEPLLNLLQSSSPSVVYEAIRLIIKLSP---SPELLQKAIN 270 (526)
T ss_dssp HHHHHHHHTCCSHHHHHHHHHHHTTSTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---SHHHHHHHHH
T ss_pred HHHhhhcccccchHHHHHHHHHHHhcccCChhhhhHHHHHHHHHHHhhccccHHHHHHHHHHHHhhc---chHHHHhhHH
Confidence 5555666688888888888887776654332221114677888888888888888777777664432 3334566788
Q ss_pred HHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhh
Q psy14014 249 TLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYI 328 (615)
Q Consensus 249 ~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l 328 (615)
.+..++.++++.+|..+++++..++...+.... .....+..+..+++..+|..++..+..++..- -...+
T Consensus 271 ~L~~lL~s~~~nvr~~~L~~L~~l~~~~~~~v~--~~~~~~~~l~~~~d~~Ir~~~l~lL~~l~~~~--------n~~~I 340 (526)
T PF01602_consen 271 PLIKLLSSSDPNVRYIALDSLSQLAQSNPPAVF--NQSLILFFLLYDDDPSIRKKALDLLYKLANES--------NVKEI 340 (526)
T ss_dssp HHHHHHTSSSHHHHHHHHHHHHHHCCHCHHHHG--THHHHHHHHHCSSSHHHHHHHHHHHHHH--HH--------HHHHH
T ss_pred HHHHHhhcccchhehhHHHHHHHhhcccchhhh--hhhhhhheecCCCChhHHHHHHHHHhhccccc--------chhhH
Confidence 888888888888888888888887765422211 22222333334778888888888887776521 23445
Q ss_pred HHHHHHhhCCC-CHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHH
Q psy14014 329 LPYVKDLVADP-NQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLA 407 (615)
Q Consensus 329 ~p~l~~~~~d~-~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~ 407 (615)
++.+.+.+.+. +..+|..++.+++.++..+... .+..++.+.+++...++.+...++..+..+....... +...
T Consensus 341 l~eL~~~l~~~~d~~~~~~~i~~I~~la~~~~~~--~~~~v~~l~~ll~~~~~~~~~~~~~~i~~ll~~~~~~--~~~~- 415 (526)
T PF01602_consen 341 LDELLKYLSELSDPDFRRELIKAIGDLAEKFPPD--AEWYVDTLLKLLEISGDYVSNEIINVIRDLLSNNPEL--REKI- 415 (526)
T ss_dssp HHHHHHHHHHC--HHHHHHHHHHHHHHHHHHGSS--HHHHHHHHHHHHHCTGGGCHCHHHHHHHHHHHHSTTT--HHHH-
T ss_pred HHHHHHHHHhccchhhhhhHHHHHHHHHhccCch--HHHHHHHHHHhhhhccccccchHHHHHHHHhhcChhh--hHHH-
Confidence 55555556333 6678888888888887766432 2345666777776655666666655555544322111 0000
Q ss_pred HHhhhhhhhhccccchhhhhhhhHHHHHhhhc-CCchHHHHHHHHhHHHHhhhCh-HhHHHHHHHHHHHhcCCcchHHHH
Q psy14014 408 IIEYMPLLAGQLGVEFFDEKLNALSIVELAED-SKWRVRLAIIEYMPLLAGQLGV-EFFDEKLNALCMTWLVDHVYAIRE 485 (615)
Q Consensus 408 i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~-~~~~vr~~~~~~l~~l~~~~~~-~~~~~~l~~~l~~~l~d~~~~vR~ 485 (615)
+ ..+.+.+.+ ....++..++..+|..+..... + ....++..+.+...+.+..+|.
T Consensus 416 ----l------------------~~L~~~l~~~~~~~~~~~~~wilGEy~~~~~~~~-~~~~~~~~l~~~~~~~~~~vk~ 472 (526)
T PF01602_consen 416 ----L------------------KKLIELLEDISSPEALAAAIWILGEYGELIENTE-SAPDILRSLIENFIEESPEVKL 472 (526)
T ss_dssp ----H------------------HHHHHHHTSSSSHHHHHHHHHHHHHHCHHHTTTT-HHHHHHHHHHHHHTTSHHHHHH
T ss_pred ----H------------------HHHHHHHHHhhHHHHHHHHHhhhcccCCcccccc-cHHHHHHHHHHhhccccHHHHH
Confidence 1 122233322 3444566666666666554443 2 2334445555555555666677
Q ss_pred HHHHHHHHHHHHhChHHhhhchhHHHHhhhc--CCCchHHHHHHHHHHHH
Q psy14014 486 AATLNLKKLVEQFGSEWAQSTVIPKVVAMSR--DQNYLHRMTCLFCINVL 533 (615)
Q Consensus 486 ~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~--d~~~~~R~~a~~~l~~l 533 (615)
..+.++.++....+.....+.+.+.+.++.. +.++.+|+.|...+.-+
T Consensus 473 ~ilt~~~Kl~~~~~~~~~~~~i~~~~~~~~~~~s~~~evr~Ra~~y~~ll 522 (526)
T PF01602_consen 473 QILTALAKLFKRNPENEVQNEILQFLLSLATEDSSDPEVRDRAREYLRLL 522 (526)
T ss_dssp HHHHHHHHHHHHSCSTTHHHHHHHHHHCHHHHS-SSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCchhhHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence 7766666666655432223345556666555 55666666666654443
No 29
>KOG0212|consensus
Probab=99.77 E-value=6.1e-16 Score=148.37 Aligned_cols=401 Identities=17% Similarity=0.192 Sum_probs=300.0
Q ss_pred HHHHhCCCChHHHHHHHHhHHHHHHHhchhh---hHhhhHH-HHHHhhccCchhHHHHHHHHHHHHHhhcChh--hHHHh
Q psy14014 172 FRNLCQDDTPMVRRAAAGKLGELAKVVEVDY---LKTDIIP-MFVNLAQDEQDSVRLLAVEACVSIASLLSQS--DVEQL 245 (615)
Q Consensus 172 l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~---~~~~ll~-~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~--~~~~~ 245 (615)
+.+.+.|+..+-|++++.-+..+.+.+-... ...+++. ....+....+..-|+.++-.+...+-.+|.+ .+...
T Consensus 5 i~r~ltdKlYekRKaaalelEk~Vk~l~~~~~~~~i~k~I~~L~~d~a~s~~~n~rkGgLiGlAA~~iaLg~~~~~Y~~~ 84 (675)
T KOG0212|consen 5 IARGLTDKLYEKRKAAALELEKLVKDLVNNNDYDQIRKVISELAGDYAYSPHANMRKGGLIGLAAVAIALGIKDAGYLEK 84 (675)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHhccCcccccccchHHHHHHHHHHhccccHHHHHH
Confidence 3556688888899999888888877553322 2233333 3444555667777888888887776667654 35677
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccc--hhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHH
Q psy14014 246 VMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEI--TKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENI 323 (615)
Q Consensus 246 l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~ 323 (615)
++|.+..++.|++-++|+.+++++.++++....+. ..+.+...+.++..|++..||. ++.-+..+.+.+..+.....
T Consensus 85 iv~Pv~~cf~D~d~~vRyyACEsLYNiaKv~k~~v~~~Fn~iFdvL~klsaDsd~~V~~-~aeLLdRLikdIVte~~~tF 163 (675)
T KOG0212|consen 85 IVPPVLNCFSDQDSQVRYYACESLYNIAKVAKGEVLVYFNEIFDVLCKLSADSDQNVRG-GAELLDRLIKDIVTESASTF 163 (675)
T ss_pred hhHHHHHhccCccceeeeHhHHHHHHHHHHhccCcccchHHHHHHHHHHhcCCcccccc-HHHHHHHHHHHhcccccccc
Confidence 88999999999999999999999999998876654 2457888999999999999984 66788888887766554445
Q ss_pred HHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcch--hhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhH
Q psy14014 324 IMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKH--NTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQ 401 (615)
Q Consensus 324 ~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~--~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~ 401 (615)
..+.++|.+.+.+.+.++.+|...++++..+-...+-+ .+.+.+++.+.+++.|++++||.-+-.+++.+...+.++.
T Consensus 164 sL~~~ipLL~eriy~~n~~tR~flv~Wl~~Lds~P~~~m~~yl~~~ldGLf~~LsD~s~eVr~~~~t~l~~fL~eI~s~P 243 (675)
T KOG0212|consen 164 SLPEFIPLLRERIYVINPMTRQFLVSWLYVLDSVPDLEMISYLPSLLDGLFNMLSDSSDEVRTLTDTLLSEFLAEIRSSP 243 (675)
T ss_pred CHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhcCCcHHHHhcchHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHhcCc
Confidence 68899999999999999999999999998876554433 3466789999999999999999888877777765443211
Q ss_pred HHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHh--HHHHHHHHHHHhcCCc
Q psy14014 402 WRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEF--FDEKLNALCMTWLVDH 479 (615)
Q Consensus 402 ~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l~d~ 479 (615)
-. + + +++.+ +.+..-+.+++..++..++..+..+.+..|.+. +.+.++..++..+.++
T Consensus 244 ~s--------~---------d-~~~~i--~vlv~~l~ss~~~iq~~al~Wi~efV~i~g~~~l~~~s~il~~iLpc~s~~ 303 (675)
T KOG0212|consen 244 SS--------M---------D-YDDMI--NVLVPHLQSSEPEIQLKALTWIQEFVKIPGRDLLLYLSGILTAILPCLSDT 303 (675)
T ss_pred cc--------c---------C-cccch--hhccccccCCcHHHHHHHHHHHHHHhcCCCcchhhhhhhhhhhcccCCCCC
Confidence 00 0 0 00001 344455667788889999999999998888865 3456666777777777
Q ss_pred ch-HHHHHHHHHHHHHHHHhChHH-----hhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhhH--HHhhHHHHH
Q psy14014 480 VY-AIREAATLNLKKLVEQFGSEW-----AQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVT--ANFLLPTVL 551 (615)
Q Consensus 480 ~~-~vR~~a~~~l~~l~~~~~~~~-----~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~--~~~i~~~l~ 551 (615)
.. ..+..+...-+.+...++.+. ....++..+...+.+..-..|.+++.++..+....+.+.+ .+.+.+.|.
T Consensus 304 e~~~i~~~a~~~n~~l~~l~s~~~~~~~id~~~ii~vl~~~l~~~~~~tri~~L~Wi~~l~~~~p~ql~~h~~~if~tLL 383 (675)
T KOG0212|consen 304 EEMSIKEYAQMVNGLLLKLVSSERLKEEIDYGSIIEVLTKYLSDDREETRIAVLNWIILLYHKAPGQLLVHNDSIFLTLL 383 (675)
T ss_pred ccccHHHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhcchHHHHHHHHHHHHHHHhhCcchhhhhccHHHHHHH
Confidence 66 588888887777777665542 2346888888899999999999999999999888777664 467999999
Q ss_pred hhCCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHHHHhhhc
Q psy14014 552 NMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKLN 593 (615)
Q Consensus 552 ~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~l~ 593 (615)
+.+.|++..|..-+...++.+++......+.+.+..++....
T Consensus 384 ~tLsd~sd~vvl~~L~lla~i~~s~~~~~~~~fl~sLL~~f~ 425 (675)
T KOG0212|consen 384 KTLSDRSDEVVLLALSLLASICSSSNSPNLRKFLLSLLEMFK 425 (675)
T ss_pred HhhcCchhHHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHh
Confidence 999999999999999999999865544333344444444443
No 30
>KOG0915|consensus
Probab=99.71 E-value=4.9e-13 Score=142.50 Aligned_cols=523 Identities=18% Similarity=0.179 Sum_probs=324.0
Q ss_pred CCCCCCcchHHHHHHH-hcCccHHHHHHHHhcHHHHHHHhCcch----hhccchhhhhhhcCCcHH-HHHHHHHHhcccc
Q psy14014 6 SAPDDSLYPIAVLIDE-LKNEDVQLRLNSIKKLSTIALALGQER----TRGELIPFLTETIYDEDE-VLLALAEQLGTFT 79 (615)
Q Consensus 6 ~~~~~~~~~i~~ll~~-l~s~d~~~R~~a~~~l~~~~~~~~~~~----~~~~ll~~l~~~~~~~~~-vr~~a~~~l~~l~ 79 (615)
...|+..+-|...+.. +.|+++..|.+++-=|-.+.+.+|... ..+++..-+..++.|++| ++..+++.||-+-
T Consensus 810 ~~n~~~~~~~~~~l~~~~~s~nph~R~A~~VWLLs~vq~l~~~~~v~l~~~eI~~aF~~~Lsd~dEf~QDvAsrGlglVY 889 (1702)
T KOG0915|consen 810 KVNDTRETIILKLLDTLLTSPNPHERQAGCVWLLSLVQYLGQQPEVVLMLKEIQEAFSHLLSDNDEFSQDVASRGLGLVY 889 (1702)
T ss_pred ccCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhccCchhhhccHHHHHHHHHHhcccHHHHHHHHhcCceEEE
Confidence 4455666666666655 669999999999988888888887432 335666667778899998 8888888887655
Q ss_pred CCCCCcchhhhchHH---------------------------------------------------------HhhhhcCc
Q psy14014 80 PNVGGPEYVHCLLPP---------------------------------------------------------LESLATVE 102 (615)
Q Consensus 80 ~~~~~~~~~~~l~~~---------------------------------------------------------l~~l~~~~ 102 (615)
+ +|+....+.+..- +.+|..+.
T Consensus 890 e-lgd~~~k~~LV~sL~~tl~~Gkr~~~~vs~eTelFq~G~Lg~Tp~Gg~isTYKELc~LASdl~qPdLVYKFM~LAnh~ 968 (1702)
T KOG0915|consen 890 E-LGDSSLKKSLVDSLVNTLTGGKRKAIKVSEETELFQEGTLGKTPDGGKISTYKELCNLASDLGQPDLVYKFMQLANHN 968 (1702)
T ss_pred e-cCCchhHHHHHHHHHHHHhccccccceeccchhcccCCcCCCCCCCCcchHHHHHHHHHhhcCChHHHHHHHHHhhhh
Confidence 4 2322211111111 12222221
Q ss_pred -hhHHHHHHHHHHHHHHhhcChhHHhh---hHHHHHHHhhcCCCcchhhhHHhhhhhhccCC---ChhhHHHHHHHHHHH
Q psy14014 103 -ETVVRDKAVESLRLISAQHSPHDLEA---HFVPLVQRLASGDWFTSRTSACGLFSVCYPRV---TAGVKAELRSHFRNL 175 (615)
Q Consensus 103 -~~~vr~~a~~~l~~l~~~~~~~~~~~---~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~---~~~~~~~l~~~l~~l 175 (615)
..+-|..|+..++.+++.... .+++ .++|.+.+.--|++..++.+-..+-+.+.+.- .+.+.++|+.-++..
T Consensus 969 A~wnSk~GaAfGf~~i~~~a~~-kl~p~l~kLIPrLyRY~yDP~~~Vq~aM~sIW~~Li~D~k~~vd~y~neIl~eLL~~ 1047 (1702)
T KOG0915|consen 969 ATWNSKKGAAFGFGAIAKQAGE-KLEPYLKKLIPRLYRYQYDPDKKVQDAMTSIWNALITDSKKVVDEYLNEILDELLVN 1047 (1702)
T ss_pred chhhcccchhhchHHHHHHHHH-hhhhHHHHhhHHHhhhccCCcHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHh
Confidence 246777777888887777643 3333 47888888888988888877666666555443 244567788778888
Q ss_pred hCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHH---HHHhhccCchhHHHHHHHHHHHHHhhcC----------hhhH
Q psy14014 176 CQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPM---FVNLAQDEQDSVRLLAVEACVSIASLLS----------QSDV 242 (615)
Q Consensus 176 ~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~---l~~~~~d~~~~vr~~a~~~l~~l~~~~~----------~~~~ 242 (615)
+.+..|+||.++|.++..+.+.-+.+...+.+..+ +.+...|-.+.||++|-.+...+++.+- ....
T Consensus 1048 lt~kewRVReasclAL~dLl~g~~~~~~~e~lpelw~~~fRvmDDIKEsVR~aa~~~~~~lsKl~vr~~d~~~~~~~~~~ 1127 (1702)
T KOG0915|consen 1048 LTSKEWRVREASCLALADLLQGRPFDQVKEKLPELWEAAFRVMDDIKESVREAADKAARALSKLCVRICDVTNGAKGKEA 1127 (1702)
T ss_pred ccchhHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCcccHHHH
Confidence 89999999999999999999876555444443333 3444456778899998877766655432 2345
Q ss_pred HHhHHHHHHH-hcCCCChHHHHHHHHHHHHHHHHhCccch--hhhHHHHHHHhhcCCcHHH-------------------
Q psy14014 243 EQLVMPTLRQ-CSGDTSWRVRYMVADKFTDLQKAVGPEIT--KTDLVQAFQMLLKDSEAEV------------------- 300 (615)
Q Consensus 243 ~~~l~~~l~~-~~~d~~~~vR~~~~~~l~~l~~~~~~~~~--~~~l~~~l~~~l~d~~~~v------------------- 300 (615)
...++|.+.. ..-+....||+.++.++..++...|.... ..+++|.|.+....-++.|
T Consensus 1128 l~~iLPfLl~~gims~v~evr~~si~tl~dl~Kssg~~lkP~~~~LIp~ll~~~s~lE~~vLnYls~r~~~~e~ealDt~ 1207 (1702)
T KOG0915|consen 1128 LDIILPFLLDEGIMSKVNEVRRFSIGTLMDLAKSSGKELKPHFPKLIPLLLNAYSELEPQVLNYLSLRLINIETEALDTL 1207 (1702)
T ss_pred HHHHHHHHhccCcccchHHHHHHHHHHHHHHHHhchhhhcchhhHHHHHHHHHccccchHHHHHHHHhhhhhHHHHHHHH
Confidence 5668888754 33467789999999999999999887643 4578998888887666544
Q ss_pred HHHHHHH------HHHHHhhccccchhHHHHHhhHHHHHHhhCC-CCHHHHHHHHHHHHhhchhhcch--hhhhhhHHHH
Q psy14014 301 RAAAANK------VRDFCQNLDAYNQENIIMTYILPYVKDLVAD-PNQHVKSALASVIMGLSPILGKH--NTVDHLLPLF 371 (615)
Q Consensus 301 r~~a~~~------l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d-~~~~vR~~~~~~l~~l~~~~g~~--~~~~~l~p~l 371 (615)
|..+++. +..++.+++ ...++++.|.+.+++.. ..-..|.+++..+..++..+|.+ .+...++..+
T Consensus 1208 R~s~aksspmmeTi~~ci~~iD-----~~vLeelip~l~el~R~sVgl~Tkvg~A~fI~~L~~r~~~emtP~sgKll~al 1282 (1702)
T KOG0915|consen 1208 RASAAKSSPMMETINKCINYID-----ISVLEELIPRLTELVRGSVGLGTKVGCASFISLLVQRLGSEMTPYSGKLLRAL 1282 (1702)
T ss_pred HHhhhcCCcHHHHHHHHHHhhh-----HHHHHHHHHHHHHHHhccCCCCcchhHHHHHHHHHHHhccccCcchhHHHHHH
Confidence 2222222 111111111 23567888888887764 45677888888888888888864 4677899999
Q ss_pred HHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccc-------------hhhhhhh------hHH
Q psy14014 372 LSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVE-------------FFDEKLN------ALS 432 (615)
Q Consensus 372 ~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~-------------~~~~~l~------~~~ 432 (615)
...++|+++.+|.....+.+.+.+...+++....+ ..++..+.+..... +..+.+. .|.
T Consensus 1283 ~~g~~dRNesv~kafAsAmG~L~k~Ss~dq~qKLi--e~~l~~~l~k~es~~siscatis~Ian~s~e~Lkn~asaILPL 1360 (1702)
T KOG0915|consen 1283 FPGAKDRNESVRKAFASAMGYLAKFSSPDQMQKLI--ETLLADLLGKDESLKSISCATISNIANYSQEMLKNYASAILPL 1360 (1702)
T ss_pred hhccccccHHHHHHHHHHHHHHHhcCChHHHHHHH--HHHHHHHhccCCCccchhHHHHHHHHHhhHHHHHhhHHHHHHH
Confidence 99999999999999999998888776655443322 00110000000000 0000000 011
Q ss_pred HHHhhhcCCchHHHHHHHHhHHHHh-hhCh-H-hHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChH---Hhhhc
Q psy14014 433 IVELAEDSKWRVRLAIIEYMPLLAG-QLGV-E-FFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSE---WAQST 506 (615)
Q Consensus 433 i~~~~~~~~~~vr~~~~~~l~~l~~-~~~~-~-~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~---~~~~~ 506 (615)
+.-...+..-.....--+.+..+.. ..|. . +..+.+.+.+.+..++..|.+|..+...+..++...... ...-.
T Consensus 1361 iFLa~~ee~Ka~q~Lw~dvW~e~vsggagtvrl~~~eiLn~iceni~nn~~w~lr~q~Akai~~~a~~~sss~~~p~ilk 1440 (1702)
T KOG0915|consen 1361 IFLAMHEEEKANQELWNDVWAELVSGGAGTVRLYLLEILNLICENITNNESWKLRKQAAKAIRVIAEGLSSSAPIPVILK 1440 (1702)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHhCCCCcchhhhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHcccccccCChHHHHH
Confidence 1111111000000000001111110 0011 1 223456667777788888999999999998888765432 11223
Q ss_pred hhHHHHhhhcCCCchHHHHHHHHHHHHHhhh
Q psy14014 507 VIPKVVAMSRDQNYLHRMTCLFCINVLAEAC 537 (615)
Q Consensus 507 i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~ 537 (615)
+.+.+...+..+.|.-+...++++....+.+
T Consensus 1441 l~~~ll~~L~GRiwdGKe~iLKAl~~~~~a~ 1471 (1702)
T KOG0915|consen 1441 LALSLLDTLNGRIWDGKEEILKALASAFEAG 1471 (1702)
T ss_pred HHHHHHHHhhccccccHHHHHHHHHHHHHHh
Confidence 5566666677777766666666666554443
No 31
>KOG0212|consensus
Probab=99.70 E-value=1.4e-13 Score=132.50 Aligned_cols=450 Identities=14% Similarity=0.121 Sum_probs=297.8
Q ss_pred hcCchhHHHHHHHHHHHHHHhhcCh----hHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCC---hhhHHHHHHH
Q psy14014 99 ATVEETVVRDKAVESLRLISAQHSP----HDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVT---AGVKAELRSH 171 (615)
Q Consensus 99 ~~~~~~~vr~~a~~~l~~l~~~~~~----~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~---~~~~~~l~~~ 171 (615)
++|.-.+-|.+|+--+.++.+.+-. +.+.+.+-.+...++.++....|+.+.--+....-.++ ....+.+++-
T Consensus 9 ltdKlYekRKaaalelEk~Vk~l~~~~~~~~i~k~I~~L~~d~a~s~~~n~rkGgLiGlAA~~iaLg~~~~~Y~~~iv~P 88 (675)
T KOG0212|consen 9 LTDKLYEKRKAAALELEKLVKDLVNNNDYDQIRKVISELAGDYAYSPHANMRKGGLIGLAAVAIALGIKDAGYLEKIVPP 88 (675)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHhccCcccccccchHHHHHHHHHHhccccHHHHHHhhHH
Confidence 4555566666666666665554322 22233333344556666666666643322221111111 2245666777
Q ss_pred HHHHhCCCChHHHHHHHHhHHHHHHHhchh--hhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhh----HHHh
Q psy14014 172 FRNLCQDDTPMVRRAAAGKLGELAKVVEVD--YLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSD----VEQL 245 (615)
Q Consensus 172 l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~--~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~----~~~~ 245 (615)
.+..+.|.+..||..+|+++-.+++....+ .+.+.++..+.++..|.+..||..| +.+..+.+.+..+. -.+.
T Consensus 89 v~~cf~D~d~~vRyyACEsLYNiaKv~k~~v~~~Fn~iFdvL~klsaDsd~~V~~~a-eLLdRLikdIVte~~~tFsL~~ 167 (675)
T KOG0212|consen 89 VLNCFSDQDSQVRYYACESLYNIAKVAKGEVLVYFNEIFDVLCKLSADSDQNVRGGA-ELLDRLIKDIVTESASTFSLPE 167 (675)
T ss_pred HHHhccCccceeeeHhHHHHHHHHHHhccCcccchHHHHHHHHHHhcCCccccccHH-HHHHHHHHHhccccccccCHHH
Confidence 778889999999999999999999987654 2456788889999999999999874 55555555544322 2456
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccc--hhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHH
Q psy14014 246 VMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEI--TKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENI 323 (615)
Q Consensus 246 l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~ 323 (615)
++|.+.+-+.+.++.+|......+..+-..-+-++ ..+.+++.+.+++.|+.++||..+-..++.|...+...... .
T Consensus 168 ~ipLL~eriy~~n~~tR~flv~Wl~~Lds~P~~~m~~yl~~~ldGLf~~LsD~s~eVr~~~~t~l~~fL~eI~s~P~s-~ 246 (675)
T KOG0212|consen 168 FIPLLRERIYVINPMTRQFLVSWLYVLDSVPDLEMISYLPSLLDGLFNMLSDSSDEVRTLTDTLLSEFLAEIRSSPSS-M 246 (675)
T ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHhcCCcHHHHhcchHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHhcCccc-c
Confidence 89999999999999999999988877654333222 24678999999999999999999999999998876533211 0
Q ss_pred HHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhh--hhhhHHHHHHhhcCCCh-hHHHHHHHhhhHhhhhhchh
Q psy14014 324 IMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNT--VDHLLPLFLSQLKDECP-EVRLNIISNLDCVNEVIGIQ 400 (615)
Q Consensus 324 ~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~--~~~l~p~l~~~l~d~~~-~vr~~a~~~l~~l~~~~~~~ 400 (615)
-.+.+.+.+...++.+++.++..++.++..+.+..|.+.. ...++..+++++.+..+ ..+..+...-+.+...++.+
T Consensus 247 d~~~~i~vlv~~l~ss~~~iq~~al~Wi~efV~i~g~~~l~~~s~il~~iLpc~s~~e~~~i~~~a~~~n~~l~~l~s~~ 326 (675)
T KOG0212|consen 247 DYDDMINVLVPHLQSSEPEIQLKALTWIQEFVKIPGRDLLLYLSGILTAILPCLSDTEEMSIKEYAQMVNGLLLKLVSSE 326 (675)
T ss_pred CcccchhhccccccCCcHHHHHHHHHHHHHHhcCCCcchhhhhhhhhhhcccCCCCCccccHHHHHHHHHHHHHHHHhhh
Confidence 1355777777888999999999999999999988887543 33456667777776544 46655554433333333322
Q ss_pred HHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhH--HHHHHHHHHHhcCC
Q psy14014 401 QWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFF--DEKLNALCMTWLVD 478 (615)
Q Consensus 401 ~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~--~~~l~~~l~~~l~d 478 (615)
...+.. + +...+ ..+.+.+.+.....|-++++.+..+-...+.+.+ .+.+++.+++.+.|
T Consensus 327 ~~~~~i---d-------------~~~ii--~vl~~~l~~~~~~tri~~L~Wi~~l~~~~p~ql~~h~~~if~tLL~tLsd 388 (675)
T KOG0212|consen 327 RLKEEI---D-------------YGSII--EVLTKYLSDDREETRIAVLNWIILLYHKAPGQLLVHNDSIFLTLLKTLSD 388 (675)
T ss_pred hhcccc---c-------------hHHHH--HHHHHHhhcchHHHHHHHHHHHHHHHhhCcchhhhhccHHHHHHHHhhcC
Confidence 111000 0 01111 3555667788888999999999998887776653 47789999999999
Q ss_pred cchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCC
Q psy14014 479 HVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNV 558 (615)
Q Consensus 479 ~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~ 558 (615)
++..|-..++..+..++..-+.. ....++..|++++....--.+..+...+..++-.+.++.+...+-.++. ..++
T Consensus 389 ~sd~vvl~~L~lla~i~~s~~~~-~~~~fl~sLL~~f~e~~~~l~~Rg~lIIRqlC~lL~aE~IYr~~a~ILe---~e~n 464 (675)
T KOG0212|consen 389 RSDEVVLLALSLLASICSSSNSP-NLRKFLLSLLEMFKEDTKLLEVRGNLIIRQLCLLLNAERIYRSIADILE---REEN 464 (675)
T ss_pred chhHHHHHHHHHHHHHhcCcccc-cHHHHHHHHHHHHhhhhHHHHhhhhHHHHHHHHHhCHHHHHHHHHHHHh---cccc
Confidence 99999999999999998754321 1234566777777666555566666667777766666554443434433 2444
Q ss_pred chHHHHHHHHHHHH
Q psy14014 559 ANVRFNVAKTLQKI 572 (615)
Q Consensus 559 ~~vr~~a~~~l~~l 572 (615)
-+.-....++|..+
T Consensus 465 l~FAstMV~~Ln~i 478 (675)
T KOG0212|consen 465 LKFASTMVQALNTI 478 (675)
T ss_pred chHHHHHHHHHHhh
Confidence 44444555555444
No 32
>KOG1240|consensus
Probab=99.68 E-value=2.6e-15 Score=155.84 Aligned_cols=273 Identities=22% Similarity=0.281 Sum_probs=210.1
Q ss_pred CChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcCh------hhHHHhHHHHHHH
Q psy14014 179 DTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQ------SDVEQLVMPTLRQ 252 (615)
Q Consensus 179 ~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~------~~~~~~l~~~l~~ 252 (615)
....-|..|++.+..++.....+.....++|++..++.|+...||..|+.++..+...+.+ ..+.++++|.+..
T Consensus 435 k~~~tK~~ALeLl~~lS~~i~de~~LDRVlPY~v~l~~Ds~a~Vra~Al~Tlt~~L~~Vr~~~~~daniF~eYlfP~L~~ 514 (1431)
T KOG1240|consen 435 KTIQTKLAALELLQELSTYIDDEVKLDRVLPYFVHLLMDSEADVRATALETLTELLALVRDIPPSDANIFPEYLFPHLNH 514 (1431)
T ss_pred hcchhHHHHHHHHHHHhhhcchHHHHhhhHHHHHHHhcCchHHHHHHHHHHHHHHHhhccCCCcccchhhHhhhhhhhHh
Confidence 3556688888889999988888888888999999999999999999999988877665542 3456678999999
Q ss_pred hcCC-CChHHHHHHHHHHHHHHHHhC---------------ccc------------hh----hhHHHHHHHhhcCCcHHH
Q psy14014 253 CSGD-TSWRVRYMVADKFTDLQKAVG---------------PEI------------TK----TDLVQAFQMLLKDSEAEV 300 (615)
Q Consensus 253 ~~~d-~~~~vR~~~~~~l~~l~~~~~---------------~~~------------~~----~~l~~~l~~~l~d~~~~v 300 (615)
++.| ....||.+.+.+++.++...- ++. .. ..+-.....++.|+.+-|
T Consensus 515 l~~d~~~~~vRiayAsnla~LA~tA~rFle~~q~~~~~g~~n~~nset~~~~~~~~~~~~L~~~V~~~v~sLlsd~~~~V 594 (1431)
T KOG1240|consen 515 LLNDSSAQIVRIAYASNLAQLAKTAYRFLELTQELRQAGMLNDPNSETAPEQNYNTELQALHHTVEQMVSSLLSDSPPIV 594 (1431)
T ss_pred hhccCccceehhhHHhhHHHHHHHHHHHHHHHHHHHhcccccCcccccccccccchHHHHHHHHHHHHHHHHHcCCchHH
Confidence 9888 667899999998888875310 000 00 113344667889999999
Q ss_pred HHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCCh
Q psy14014 301 RAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECP 380 (615)
Q Consensus 301 r~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~ 380 (615)
|.+-+.++..+|..++++... +.+++.|...++|.+|+.|.++.+.|..++-.+|.....++++|.+.+.+.|..+
T Consensus 595 kr~Lle~i~~LC~FFGk~ksN----D~iLshLiTfLNDkDw~LR~aFfdsI~gvsi~VG~rs~seyllPLl~Q~ltD~EE 670 (1431)
T KOG1240|consen 595 KRALLESIIPLCVFFGKEKSN----DVILSHLITFLNDKDWRLRGAFFDSIVGVSIFVGWRSVSEYLLPLLQQGLTDGEE 670 (1431)
T ss_pred HHHHHHHHHHHHHHhhhcccc----cchHHHHHHHhcCccHHHHHHHHhhccceEEEEeeeeHHHHHHHHHHHhccCcch
Confidence 999999999999999887543 5578888889999999999999999999999999988889999999999999999
Q ss_pred hHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhC
Q psy14014 381 EVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLG 460 (615)
Q Consensus 381 ~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~ 460 (615)
-|-..|+.+++.+++.-- +++. +..+.+ ....-++-.+|-.+|.+++..+..++..++
T Consensus 671 ~Viv~aL~~ls~Lik~~l---l~K~-~v~~i~------------------~~v~PlL~hPN~WIR~~~~~iI~~~~~~ls 728 (1431)
T KOG1240|consen 671 AVIVSALGSLSILIKLGL---LRKP-AVKDIL------------------QDVLPLLCHPNLWIRRAVLGIIAAIARQLS 728 (1431)
T ss_pred hhHHHHHHHHHHHHHhcc---cchH-HHHHHH------------------HhhhhheeCchHHHHHHHHHHHHHHHhhhh
Confidence 999999999988876321 1111 111112 233334556777799999999999999988
Q ss_pred hHhHHHHHHHHHHHhcC
Q psy14014 461 VEFFDEKLNALCMTWLV 477 (615)
Q Consensus 461 ~~~~~~~l~~~l~~~l~ 477 (615)
....+..++|.+-.++.
T Consensus 729 ~advyc~l~P~irpfl~ 745 (1431)
T KOG1240|consen 729 AADVYCKLMPLIRPFLE 745 (1431)
T ss_pred hhhheEEeehhhHHhhh
Confidence 76555556665555444
No 33
>PTZ00429 beta-adaptin; Provisional
Probab=99.67 E-value=4.4e-12 Score=133.49 Aligned_cols=218 Identities=16% Similarity=0.124 Sum_probs=157.7
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhH
Q psy14014 167 ELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLV 246 (615)
Q Consensus 167 ~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l 246 (615)
.+++.+.++++.++..+|+.+.-.+..+++.-+.. .-..++.+.+-++|+++.+|..|+.+++.+ ....+.+.+
T Consensus 68 ~LF~dVvk~~~S~d~elKKLvYLYL~~ya~~~pel--alLaINtl~KDl~d~Np~IRaLALRtLs~I----r~~~i~e~l 141 (746)
T PTZ00429 68 YLFVDVVKLAPSTDLELKKLVYLYVLSTARLQPEK--ALLAVNTFLQDTTNSSPVVRALAVRTMMCI----RVSSVLEYT 141 (746)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHcccChHH--HHHHHHHHHHHcCCCCHHHHHHHHHHHHcC----CcHHHHHHH
Confidence 35555667788889999999998888886533221 223467778888899999999999988764 334566778
Q ss_pred HHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHH
Q psy14014 247 MPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMT 326 (615)
Q Consensus 247 ~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~ 326 (615)
.+.+.+++.|+++.||++++.++.++....+.......+++.+.+++.|.++.|..+|+.+|..+....+... ....
T Consensus 142 ~~~lkk~L~D~~pYVRKtAalai~Kly~~~pelv~~~~~~~~L~~LL~D~dp~Vv~nAl~aL~eI~~~~~~~l---~l~~ 218 (746)
T PTZ00429 142 LEPLRRAVADPDPYVRKTAAMGLGKLFHDDMQLFYQQDFKKDLVELLNDNNPVVASNAAAIVCEVNDYGSEKI---ESSN 218 (746)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHhhCcccccccchHHHHHHHhcCCCccHHHHHHHHHHHHHHhCchhh---HHHH
Confidence 8889999999999999999999999887655433344688889999999999999999999999876443211 1122
Q ss_pred hhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhh
Q psy14014 327 YILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNE 395 (615)
Q Consensus 327 ~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~ 395 (615)
..+..+...+.+-++.-+..+++.+...... .+.....++..+...++..++.|...|++++-.+..
T Consensus 219 ~~~~~Ll~~L~e~~EW~Qi~IL~lL~~y~P~--~~~e~~~il~~l~~~Lq~~N~AVVl~Aik~il~l~~ 285 (746)
T PTZ00429 219 EWVNRLVYHLPECNEWGQLYILELLAAQRPS--DKESAETLLTRVLPRMSHQNPAVVMGAIKVVANLAS 285 (746)
T ss_pred HHHHHHHHHhhcCChHHHHHHHHHHHhcCCC--CcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcC
Confidence 2334444555666666677777776442211 122234577778888888899999999998776654
No 34
>KOG0166|consensus
Probab=99.66 E-value=1.7e-13 Score=134.16 Aligned_cols=382 Identities=13% Similarity=0.129 Sum_probs=265.7
Q ss_pred HHHHHhhccCchhHHHHHHHHHHHHHhhcCh----hhHHHhHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHhCcc---c
Q psy14014 209 PMFVNLAQDEQDSVRLLAVEACVSIASLLSQ----SDVEQLVMPTLRQCSG-DTSWRVRYMVADKFTDLQKAVGPE---I 280 (615)
Q Consensus 209 ~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~----~~~~~~l~~~l~~~~~-d~~~~vR~~~~~~l~~l~~~~~~~---~ 280 (615)
+...+.+...+...+..+...+..+.+.-.. +.+...++|.+.+++. +.++.++..++.+|.+++...... +
T Consensus 69 ~~~~~~~~S~~~~~q~~a~~~~rkllS~~~~ppi~~vi~~G~v~~lV~~l~~~~~~~lq~eAAWaLTnIAsgtse~T~~v 148 (514)
T KOG0166|consen 69 ELMLAALYSDDPQQQLTATQAFRKLLSKERNPPIDEVIQSGVVPRLVEFLSRDDNPTLQFEAAWALTNIASGTSEQTKVV 148 (514)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHccCCCCCHHHHHHcCcHHHHHHHHccCCChhHHHHHHHHHHHHhcCchhhcccc
Confidence 3333344444444455555555554443332 1223357888888775 667889999999999998743322 2
Q ss_pred hhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCH-HHHHHHHHHHHhhchhhc
Q psy14014 281 TKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQ-HVKSALASVIMGLSPILG 359 (615)
Q Consensus 281 ~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~-~vR~~~~~~l~~l~~~~g 359 (615)
.....+|.|++++.+++.+|++.|+.+|+.++..- +..+...+...+++.|..++...+. ...+.+.+++.+++..-.
T Consensus 149 v~agavp~fi~Ll~s~~~~v~eQavWALgNIagds-~~~Rd~vl~~g~l~pLl~~l~~~~~~~~lRn~tW~LsNlcrgk~ 227 (514)
T KOG0166|consen 149 VDAGAVPIFIQLLSSPSADVREQAVWALGNIAGDS-PDCRDYVLSCGALDPLLRLLNKSDKLSMLRNATWTLSNLCRGKN 227 (514)
T ss_pred ccCCchHHHHHHhcCCcHHHHHHHHHHHhccccCC-hHHHHHHHhhcchHHHHHHhccccchHHHHHHHHHHHHHHcCCC
Confidence 34578999999999999999999999999988753 3333333444566666666666554 778889999999998643
Q ss_pred c-h--hhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHh
Q psy14014 360 K-H--NTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVEL 436 (615)
Q Consensus 360 ~-~--~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~ 436 (615)
+ . .....++|.+..++.+.+++|...|+.+++.+.....+ .-+..--.... |.+..+
T Consensus 228 P~P~~~~v~~iLp~L~~ll~~~D~~Vl~Da~WAlsyLsdg~ne--~iq~vi~~gvv------------------~~LV~l 287 (514)
T KOG0166|consen 228 PSPPFDVVAPILPALLRLLHSTDEEVLTDACWALSYLTDGSNE--KIQMVIDAGVV------------------PRLVDL 287 (514)
T ss_pred CCCcHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCChH--HHHHHHHccch------------------HHHHHH
Confidence 2 1 23567899999999999999999999999877643322 11111000011 788888
Q ss_pred hhcCCchHHHHHHHHhHHHHhhhCh---HhHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHHHHhChH---HhhhchhH
Q psy14014 437 AEDSKWRVRLAIIEYMPLLAGQLGV---EFFDEKLNALCMTWLV-DHVYAIREAATLNLKKLVEQFGSE---WAQSTVIP 509 (615)
Q Consensus 437 ~~~~~~~vr~~~~~~l~~l~~~~~~---~~~~~~l~~~l~~~l~-d~~~~vR~~a~~~l~~l~~~~~~~---~~~~~i~~ 509 (615)
+......++..++.+++.++..-+. .......+|.+..++. .+...+|+.|+.++++|...-... .....++|
T Consensus 288 L~~~~~~v~~PaLRaiGNIvtG~d~QTq~vi~~~~L~~l~~ll~~s~~~~ikkEAcW~iSNItAG~~~qiqaVida~l~p 367 (514)
T KOG0166|consen 288 LGHSSPKVVTPALRAIGNIVTGSDEQTQVVINSGALPVLSNLLSSSPKESIKKEACWTISNITAGNQEQIQAVIDANLIP 367 (514)
T ss_pred HcCCCcccccHHHhhccceeeccHHHHHHHHhcChHHHHHHHhccCcchhHHHHHHHHHHHhhcCCHHHHHHHHHcccHH
Confidence 9888989999999999997653222 1233557788888887 666779999999999998732111 12235899
Q ss_pred HHHhhhcCCCchHHHHHHHHHHHHHhhhChhhH----HHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhh------h
Q psy14014 510 KVVAMSRDQNYLHRMTCLFCINVLAEACGPTVT----ANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILET------N 579 (615)
Q Consensus 510 ~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~----~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~------~ 579 (615)
.|..++...+...|..|+++++++.....++-. ...+++.+..++.-.|..+-..+..++..+...-+. .
T Consensus 368 ~Li~~l~~~ef~~rKEAawaIsN~ts~g~~~qi~yLv~~giI~plcdlL~~~D~~ii~v~Ld~l~nil~~~e~~~~~~~n 447 (514)
T KOG0166|consen 368 VLINLLQTAEFDIRKEAAWAISNLTSSGTPEQIKYLVEQGIIKPLCDLLTCPDVKIILVALDGLENILKVGEAEKNRGTN 447 (514)
T ss_pred HHHHHHhccchHHHHHHHHHHHhhcccCCHHHHHHHHHcCCchhhhhcccCCChHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999876654432 345788889988877888877888888888765321 2
Q ss_pred hHHhh-----HHHHHhhhcCCCCccHHHHHHHHHHHH
Q psy14014 580 VIQSQ-----VKPALDKLNGDTDVDVKYFAQEAISSI 611 (615)
Q Consensus 580 ~~~~~-----~~~~l~~l~~d~d~~v~~~a~~a~~~~ 611 (615)
.+... ...-++.|...+++++...|...++.+
T Consensus 448 ~~~~~IEe~ggldkiE~LQ~hen~~Iy~~A~~II~~y 484 (514)
T KOG0166|consen 448 PLAIMIEEAGGLDKIENLQSHENEEIYKKAYKIIDTY 484 (514)
T ss_pred HHHHHHHHccChhHHHHhhccccHHHHHHHHHHHHHh
Confidence 22222 233456677788888988888877654
No 35
>KOG1240|consensus
Probab=99.61 E-value=1.9e-14 Score=149.59 Aligned_cols=298 Identities=19% Similarity=0.210 Sum_probs=200.3
Q ss_pred HHHHHHHHhccccCCCCCcchhhhchHHHhhhhcCchhHHHHHHHHHHHHHHhhcCh------hHHhhhHHHHHHHhhcC
Q psy14014 67 VLLALAEQLGTFTPNVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSP------HDLEAHFVPLVQRLASG 140 (615)
Q Consensus 67 vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~------~~~~~~~l~~l~~l~~~ 140 (615)
-|..|.+.|..++.++.++..++.++|-+..+..|+...||..|++++..+.....+ ..+.++++|.+..+..|
T Consensus 439 tK~~ALeLl~~lS~~i~de~~LDRVlPY~v~l~~Ds~a~Vra~Al~Tlt~~L~~Vr~~~~~daniF~eYlfP~L~~l~~d 518 (1431)
T KOG1240|consen 439 TKLAALELLQELSTYIDDEVKLDRVLPYFVHLLMDSEADVRATALETLTELLALVRDIPPSDANIFPEYLFPHLNHLLND 518 (1431)
T ss_pred hHHHHHHHHHHHhhhcchHHHHhhhHHHHHHHhcCchHHHHHHHHHHHHHHHhhccCCCcccchhhHhhhhhhhHhhhcc
Confidence 455666666667766666666777777777777888888888888777776655432 23345666666666666
Q ss_pred -CCcchhhhHHhhhhhhccCCChhhHHHHHHHHHH--HhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhcc
Q psy14014 141 -DWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRN--LCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQD 217 (615)
Q Consensus 141 -~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~~--l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d 217 (615)
....+|.+-+..++.++....... ++-..+.. +..|++.+ ...+ --...+.......+-..+.+++.|
T Consensus 519 ~~~~~vRiayAsnla~LA~tA~rFl--e~~q~~~~~g~~n~~nse---t~~~----~~~~~~~~~L~~~V~~~v~sLlsd 589 (1431)
T KOG1240|consen 519 SSAQIVRIAYASNLAQLAKTAYRFL--ELTQELRQAGMLNDPNSE---TAPE----QNYNTELQALHHTVEQMVSSLLSD 589 (1431)
T ss_pred CccceehhhHHhhHHHHHHHHHHHH--HHHHHHHhcccccCcccc---cccc----cccchHHHHHHHHHHHHHHHHHcC
Confidence 344455554444444432211000 00000000 11222221 0000 000000011122344566778899
Q ss_pred CchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCc
Q psy14014 218 EQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSE 297 (615)
Q Consensus 218 ~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~ 297 (615)
+.+.||++-++.+..++..+|++.-...+++.+..+++|.+|..|.+..+.+..++..+|..-..+-++|++.+.+.|.+
T Consensus 590 ~~~~Vkr~Lle~i~~LC~FFGk~ksND~iLshLiTfLNDkDw~LR~aFfdsI~gvsi~VG~rs~seyllPLl~Q~ltD~E 669 (1431)
T KOG1240|consen 590 SPPIVKRALLESIIPLCVFFGKEKSNDVILSHLITFLNDKDWRLRGAFFDSIVGVSIFVGWRSVSEYLLPLLQQGLTDGE 669 (1431)
T ss_pred CchHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHhcCccHHHHHHHHhhccceEEEEeeeeHHHHHHHHHHHhccCcc
Confidence 99999999999999999999998777789999999999999999999999999888888876556789999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhc
Q psy14014 298 AEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLK 376 (615)
Q Consensus 298 ~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~ 376 (615)
+.|-..|+.++..+++.-. ..+..+.+++..+..++-.++..+|++++..|..+...++.....-.++|.+-.++.
T Consensus 670 E~Viv~aL~~ls~Lik~~l---l~K~~v~~i~~~v~PlL~hPN~WIR~~~~~iI~~~~~~ls~advyc~l~P~irpfl~ 745 (1431)
T KOG1240|consen 670 EAVIVSALGSLSILIKLGL---LRKPAVKDILQDVLPLLCHPNLWIRRAVLGIIAAIARQLSAADVYCKLMPLIRPFLE 745 (1431)
T ss_pred hhhHHHHHHHHHHHHHhcc---cchHHHHHHHHhhhhheeCchHHHHHHHHHHHHHHHhhhhhhhheEEeehhhHHhhh
Confidence 9999999999999887421 112345556666667788999999999999999998888765444445555555443
No 36
>KOG0166|consensus
Probab=99.60 E-value=3.9e-12 Score=124.72 Aligned_cols=381 Identities=14% Similarity=0.136 Sum_probs=265.4
Q ss_pred HHHHHHhCCCChHHHHHHHHhHHHHHHHhch----hhhHhhhHHHHHHhhc-cCchhHHHHHHHHHHHHHhhcChhh---
Q psy14014 170 SHFRNLCQDDTPMVRRAAAGKLGELAKVVEV----DYLKTDIIPMFVNLAQ-DEQDSVRLLAVEACVSIASLLSQSD--- 241 (615)
Q Consensus 170 ~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~----~~~~~~ll~~l~~~~~-d~~~~vr~~a~~~l~~l~~~~~~~~--- 241 (615)
+...+.....++..+..+...+..+...-.. +.....++|.+.+.++ +.++.++..|..++..++.......
T Consensus 69 ~~~~~~~~S~~~~~q~~a~~~~rkllS~~~~ppi~~vi~~G~v~~lV~~l~~~~~~~lq~eAAWaLTnIAsgtse~T~~v 148 (514)
T KOG0166|consen 69 ELMLAALYSDDPQQQLTATQAFRKLLSKERNPPIDEVIQSGVVPRLVEFLSRDDNPTLQFEAAWALTNIASGTSEQTKVV 148 (514)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHccCCCCCHHHHHHcCcHHHHHHHHccCCChhHHHHHHHHHHHHhcCchhhcccc
Confidence 3334444445555566666666655443221 2345578999998886 7779999999999999988766532
Q ss_pred HHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhC---ccchhhhHHHHHHHhhcCCcH-HHHHHHHHHHHHHHhhccc
Q psy14014 242 VEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVG---PEITKTDLVQAFQMLLKDSEA-EVRAAAANKVRDFCQNLDA 317 (615)
Q Consensus 242 ~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~---~~~~~~~l~~~l~~~l~d~~~-~vr~~a~~~l~~~~~~~~~ 317 (615)
.....+|.+..++.+++..||+.++.+||+++.... +......+++.++.++....+ .....+..+|..++..-.+
T Consensus 149 v~agavp~fi~Ll~s~~~~v~eQavWALgNIagds~~~Rd~vl~~g~l~pLl~~l~~~~~~~~lRn~tW~LsNlcrgk~P 228 (514)
T KOG0166|consen 149 VDAGAVPIFIQLLSSPSADVREQAVWALGNIAGDSPDCRDYVLSCGALDPLLRLLNKSDKLSMLRNATWTLSNLCRGKNP 228 (514)
T ss_pred ccCCchHHHHHHhcCCcHHHHHHHHHHHhccccCChHHHHHHHhhcchHHHHHHhccccchHHHHHHHHHHHHHHcCCCC
Confidence 233578999999999999999999999999875322 222233556666666666554 6677899999999986532
Q ss_pred cchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcc--hh-hhhhhHHHHHHhhcCCChhHHHHHHHhhhHhh
Q psy14014 318 YNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGK--HN-TVDHLLPLFLSQLKDECPEVRLNIISNLDCVN 394 (615)
Q Consensus 318 ~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~--~~-~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~ 394 (615)
... -.....++|.|..++.+.++.|..-+++++..++..... +. ....++|.+..+|...+..|+..|+++++.++
T Consensus 229 ~P~-~~~v~~iLp~L~~ll~~~D~~Vl~Da~WAlsyLsdg~ne~iq~vi~~gvv~~LV~lL~~~~~~v~~PaLRaiGNIv 307 (514)
T KOG0166|consen 229 SPP-FDVVAPILPALLRLLHSTDEEVLTDACWALSYLTDGSNEKIQMVIDAGVVPRLVDLLGHSSPKVVTPALRAIGNIV 307 (514)
T ss_pred CCc-HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCChHHHHHHHHccchHHHHHHHcCCCcccccHHHhhcccee
Confidence 211 124678999999999999999999999999999864332 11 12357899999999999999999999998864
Q ss_pred hhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhh-cCCchHHHHHHHHhHHHHhhhChH-----hHHHHH
Q psy14014 395 EVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAE-DSKWRVRLAIIEYMPLLAGQLGVE-----FFDEKL 468 (615)
Q Consensus 395 ~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~-~~~~~vr~~~~~~l~~l~~~~~~~-----~~~~~l 468 (615)
. |.+...+.+-....+ |.+..++. ++...+|..++..+..|+. |.. .+...+
T Consensus 308 t--G~d~QTq~vi~~~~L------------------~~l~~ll~~s~~~~ikkEAcW~iSNItA--G~~~qiqaVida~l 365 (514)
T KOG0166|consen 308 T--GSDEQTQVVINSGAL------------------PVLSNLLSSSPKESIKKEACWTISNITA--GNQEQIQAVIDANL 365 (514)
T ss_pred e--ccHHHHHHHHhcChH------------------HHHHHHhccCcchhHHHHHHHHHHHhhc--CCHHHHHHHHHccc
Confidence 3 434333332111112 56666666 5666799999999999976 432 245678
Q ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHh----hhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhh---Ch--
Q psy14014 469 NALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWA----QSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEAC---GP-- 539 (615)
Q Consensus 469 ~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~----~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~---~~-- 539 (615)
+|.++..+....+..|+.|+.+++.+...-.++.. ...+++.+-+++.-.+...-..++.++..+.+.. +.
T Consensus 366 ~p~Li~~l~~~ef~~rKEAawaIsN~ts~g~~~qi~yLv~~giI~plcdlL~~~D~~ii~v~Ld~l~nil~~~e~~~~~~ 445 (514)
T KOG0166|consen 366 IPVLINLLQTAEFDIRKEAAWAISNLTSSGTPEQIKYLVEQGIIKPLCDLLTCPDVKIILVALDGLENILKVGEAEKNRG 445 (514)
T ss_pred HHHHHHHHhccchHHHHHHHHHHHhhcccCCHHHHHHHHHcCCchhhhhcccCCChHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999998875444321 2347888888887677766666777887776542 11
Q ss_pred -hhHH-----HhhHHHHHhhCCCCCchHHHHHHHHHHHHh
Q psy14014 540 -TVTA-----NFLLPTVLNMAGDNVANVRFNVAKTLQKIG 573 (615)
Q Consensus 540 -~~~~-----~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~ 573 (615)
..+. ...+..+..+....+.++...|.+.+....
T Consensus 446 ~n~~~~~IEe~ggldkiE~LQ~hen~~Iy~~A~~II~~yf 485 (514)
T KOG0166|consen 446 TNPLAIMIEEAGGLDKIENLQSHENEEIYKKAYKIIDTYF 485 (514)
T ss_pred ccHHHHHHHHccChhHHHHhhccccHHHHHHHHHHHHHhc
Confidence 1111 134556666666777677776666666554
No 37
>KOG4224|consensus
Probab=99.48 E-value=5.3e-12 Score=115.32 Aligned_cols=344 Identities=15% Similarity=0.123 Sum_probs=196.9
Q ss_pred HHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhH---hhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHH--H
Q psy14014 170 SHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLK---TDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVE--Q 244 (615)
Q Consensus 170 ~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~---~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~--~ 244 (615)
.-+..++++.++.+..+++..+|.++-..+..... ..+-+.+.++..|.. +||..++.|+..++..-...... .
T Consensus 88 epvl~llqs~d~~Iq~aa~~alGnlAVn~enk~liv~l~Gl~~Li~qmmtd~v-evqcnaVgCitnLaT~d~nk~kiA~s 166 (550)
T KOG4224|consen 88 EPVLALLQSCDKCIQCAAGEALGNLAVNMENKGLIVSLLGLDLLILQMMTDGV-EVQCNAVGCITNLATFDSNKVKIARS 166 (550)
T ss_pred hHHHHHHhCcchhhhhhhhhhhccceeccCCceEEEeccChHHHHHHhcCCCc-EEEeeehhhhhhhhccccchhhhhhc
Confidence 33466778999999999999999998766553322 234457777776655 68888899998888763322111 1
Q ss_pred hHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCcc--chhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhH
Q psy14014 245 LVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPE--ITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQEN 322 (615)
Q Consensus 245 ~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~--~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~ 322 (615)
..+..+..+.+.++.++|+.+..++..+.....+. .....-+|++..+++..++.||..+..+++.+.-.-....+-.
T Consensus 167 GaL~pltrLakskdirvqrnatgaLlnmThs~EnRr~LV~aG~lpvLVsll~s~d~dvqyycttaisnIaVd~~~Rk~La 246 (550)
T KOG4224|consen 167 GALEPLTRLAKSKDIRVQRNATGALLNMTHSRENRRVLVHAGGLPVLVSLLKSGDLDVQYYCTTAISNIAVDRRARKILA 246 (550)
T ss_pred cchhhhHhhcccchhhHHHHHHHHHHHhhhhhhhhhhhhccCCchhhhhhhccCChhHHHHHHHHhhhhhhhHHHHHHHH
Confidence 23445566888889999999999988877654322 2223568999999999999999999999988765321111111
Q ss_pred HHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcc--hhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchh
Q psy14014 323 IIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGK--HNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQ 400 (615)
Q Consensus 323 ~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~--~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~ 400 (615)
..-+.++|.+..++.|++++++..+..++..++..... +.....-+|.++++++++.-..-..-.-++..+.-+-+.
T Consensus 247 qaep~lv~~Lv~Lmd~~s~kvkcqA~lALrnlasdt~Yq~eiv~ag~lP~lv~Llqs~~~plilasVaCIrnisihplN- 325 (550)
T KOG4224|consen 247 QAEPKLVPALVDLMDDGSDKVKCQAGLALRNLASDTEYQREIVEAGSLPLLVELLQSPMGPLILASVACIRNISIHPLN- 325 (550)
T ss_pred hcccchHHHHHHHHhCCChHHHHHHHHHHhhhcccchhhhHHHhcCCchHHHHHHhCcchhHHHHHHHHHhhcccccCc-
Confidence 12345888899999999999999998888888753221 222223467777777664322111111111000000000
Q ss_pred HHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhc-CCchHHHHHHHHhHHHHhhhChH---hHHHHHHHHHHHhc
Q psy14014 401 QWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAED-SKWRVRLAIIEYMPLLAGQLGVE---FFDEKLNALCMTWL 476 (615)
Q Consensus 401 ~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~-~~~~vr~~~~~~l~~l~~~~~~~---~~~~~l~~~l~~~l 476 (615)
. ....+.-+.. -+..+++- .+..++..+...+..++...... ++...-+|.+..++
T Consensus 326 ---e----------------~lI~dagfl~-pLVrlL~~~dnEeiqchAvstLrnLAasse~n~~~i~esgAi~kl~eL~ 385 (550)
T KOG4224|consen 326 ---E----------------VLIADAGFLR-PLVRLLRAGDNEEIQCHAVSTLRNLAASSEHNVSVIRESGAIPKLIELL 385 (550)
T ss_pred ---c----------------cceecccchh-HHHHHHhcCCchhhhhhHHHHHHHHhhhhhhhhHHHhhcCchHHHHHHH
Confidence 0 0000001111 13334433 23335555555555555433331 12234455555555
Q ss_pred CCcchHHHHHHHHHHHHHHHHhCh--HHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHh
Q psy14014 477 VDHVYAIREAATLNLKKLVEQFGS--EWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAE 535 (615)
Q Consensus 477 ~d~~~~vR~~a~~~l~~l~~~~~~--~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~ 535 (615)
.|....+|..-..++..++-.-.. .+....++|.|..+..+.+-.+|-+++.+++++++
T Consensus 386 lD~pvsvqseisac~a~Lal~d~~k~~lld~gi~~iLIp~t~s~s~Ev~gNaAaAL~Nlss 446 (550)
T KOG4224|consen 386 LDGPVSVQSEISACIAQLALNDNDKEALLDSGIIPILIPWTGSESEEVRGNAAAALINLSS 446 (550)
T ss_pred hcCChhHHHHHHHHHHHHHhccccHHHHhhcCCcceeecccCccchhhcccHHHHHHhhhh
Confidence 555555555555555555432111 11112255555555555555566666665555543
No 38
>KOG1943|consensus
Probab=99.47 E-value=3.4e-08 Score=103.28 Aligned_cols=429 Identities=19% Similarity=0.167 Sum_probs=248.1
Q ss_pred hHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCc-hhHHHHHHHHHHHHHhh-cChhh
Q psy14014 164 VKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQ-DSVRLLAVEACVSIASL-LSQSD 241 (615)
Q Consensus 164 ~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~-~~vr~~a~~~l~~l~~~-~~~~~ 241 (615)
..+.+...+...++|.+..||..+++.++.+++..+.+... ..+.....+++..+ +..=..|+-++.+++.. +-...
T Consensus 338 ivE~vie~Lls~l~d~dt~VrWSaAKg~grvt~rlp~~Lad-~vi~svid~~~p~e~~~aWHgacLaLAELA~rGlLlps 416 (1133)
T KOG1943|consen 338 IVEFVIEHLLSALSDTDTVVRWSAAKGLGRVTSRLPPELAD-QVIGSVIDLFNPAEDDSAWHGACLALAELALRGLLLPS 416 (1133)
T ss_pred HHHHHHHHHHHhccCCcchhhHHHHHHHHHHHccCcHHHHH-HHHHHHHHhcCcCCchhHHHHHHHHHHHHHhcCCcchH
Confidence 45567778888899999999999999999999998865322 23333333333211 22333666666666542 11112
Q ss_pred HHHhHHHHHHHhcC--------CCChHHHHHHHHHHHHHHHHhCccchh---hhHHH-HHHHhhcCCcHHHHHHHHHHHH
Q psy14014 242 VEQLVMPTLRQCSG--------DTSWRVRYMVADKFTDLQKAVGPEITK---TDLVQ-AFQMLLKDSEAEVRAAAANKVR 309 (615)
Q Consensus 242 ~~~~l~~~l~~~~~--------d~~~~vR~~~~~~l~~l~~~~~~~~~~---~~l~~-~l~~~l~d~~~~vr~~a~~~l~ 309 (615)
....++|.+.+.+. .....||.+++..+..++..+.+.... ..+.+ .+...+-|.+-.+|.+|..++-
T Consensus 417 ~l~dVvplI~kaL~Yd~~~G~~s~G~~VRDaAcY~~WAf~Rays~~~l~p~l~~L~s~LL~~AlFDrevncRRAAsAAlq 496 (1133)
T KOG1943|consen 417 LLEDVVPLILKALHYDVRRGQHSVGQHVRDAACYVCWAFARAYSPSDLKPVLQSLASALLIVALFDREVNCRRAASAALQ 496 (1133)
T ss_pred HHHHHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHHHhcCChhhhhHHHHHHHHHHHHHHhcCchhhHhHHHHHHHH
Confidence 34567888776553 234679999999999999887655322 23433 4566778999999999999998
Q ss_pred HHHhhccccc----------------hhH----------HHHHhhHHHHHHh----hCCCCHHHHHHHHHHHHhhchhhc
Q psy14014 310 DFCQNLDAYN----------------QEN----------IIMTYILPYVKDL----VADPNQHVKSALASVIMGLSPILG 359 (615)
Q Consensus 310 ~~~~~~~~~~----------------~~~----------~~~~~l~p~l~~~----~~d~~~~vR~~~~~~l~~l~~~~g 359 (615)
+.....++-. +.+ .+..-.-|.+..+ +..=+..+|..++.+|..+.....
T Consensus 497 E~VGR~~n~p~Gi~Lis~~dy~sV~~rsNcy~~l~~~ia~~~~y~~~~f~~L~t~Kv~HWd~~irelaa~aL~~Ls~~~p 576 (1133)
T KOG1943|consen 497 ENVGRQGNFPHGISLISTIDYFSVTNRSNCYLDLCVSIAEFSGYREPVFNHLLTKKVCHWDVKIRELAAYALHKLSLTEP 576 (1133)
T ss_pred HHhccCCCCCCchhhhhhcchhhhhhhhhHHHHHhHHHHhhhhHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhH
Confidence 8776543321 000 0011111222222 233356779999999999766433
Q ss_pred chhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhH-----HHHHHHHHhhhhhhhhccccchhhhhhhhHHHH
Q psy14014 360 KHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQ-----WRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIV 434 (615)
Q Consensus 360 ~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~-----~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~ 434 (615)
+...++.+|.++......+...|.++..+.+.+......-. ..+.. +..++.+.. |.+.
T Consensus 577 -k~~a~~~L~~lld~~ls~~~~~r~g~~la~~ev~~~~~~l~~~~~~l~e~~--i~~l~~ii~-------------~~~~ 640 (1133)
T KOG1943|consen 577 -KYLADYVLPPLLDSTLSKDASMRHGVFLAAGEVIGALRKLEPVIKGLDENR--IAGLLSIIP-------------PICD 640 (1133)
T ss_pred -HhhcccchhhhhhhhcCCChHHhhhhHHHHHHHHHHhhhhhhhhhhhHHHH--hhhhhhhcc-------------HHHH
Confidence 33444566666666656678888888877776654321100 00000 000100000 1111
Q ss_pred Hhhh-cCCchHHHHHHHHhHHHHhhh---ChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHh--ChHHhhhchh
Q psy14014 435 ELAE-DSKWRVRLAIIEYMPLLAGQL---GVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQF--GSEWAQSTVI 508 (615)
Q Consensus 435 ~~~~-~~~~~vr~~~~~~l~~l~~~~---~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~--~~~~~~~~i~ 508 (615)
.-.. .....+|.+.+..+..+...- -.+++.+.....+.+.+.+++ .+|.+|..+++.++..+ +++.....++
T Consensus 641 ~~~~rg~~~lmr~~~~~~Ie~~s~s~~~~~~~~v~e~~~~ll~~~l~~~n-~i~~~av~av~~l~s~y~~~d~~~~~~li 719 (1133)
T KOG1943|consen 641 RYFYRGQGTLMRQATLKFIEQLSLSKDRLFQDFVIENWQMLLAQNLTLPN-QIRDAAVSAVSDLVSTYVKADEGEEAPLI 719 (1133)
T ss_pred HHhccchHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHhhcchH-HHHHHHHHHHHHHHHHHHhcCchhhhHHH
Confidence 1110 001235666666666554322 123444555555666667777 89999999999998765 2221212355
Q ss_pred HHHHhhhcCC-CchHHHHHHHHHHHHHhh-hChhhHHHhhHHHHH-hhCCCCCchHHHHHHHHHHHHhHhhhh----h--
Q psy14014 509 PKVVAMSRDQ-NYLHRMTCLFCINVLAEA-CGPTVTANFLLPTVL-NMAGDNVANVRFNVAKTLQKIGPILET----N-- 579 (615)
Q Consensus 509 ~~l~~~~~d~-~~~~R~~a~~~l~~l~~~-~~~~~~~~~i~~~l~-~~~~D~~~~vr~~a~~~l~~l~~~~~~----~-- 579 (615)
...+..+.+. +..+|+....+++.+-.. +.-. ..+.+...+. ....|..+.-|.....++.+++...+. .
T Consensus 720 ~~~ls~~~~~~~~~~r~g~~lal~~lp~~~i~~~-~q~~lc~~~l~~~p~d~~a~aR~~~V~al~~v~~~~~~~~~~~~~ 798 (1133)
T KOG1943|consen 720 TRYLSRLTKCSEERIRRGLILALGVLPSELIHRH-LQEKLCKLVLELLPSDAWAEARQQNVKALAHVCKTVTSLLFSESI 798 (1133)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHccCcHHhhchH-HHHHHHHHHhccCcccccHHHHHHHHHHHHHHHHHHHHhhccccH
Confidence 6666655555 778888888888876422 1111 1222333222 234666889999999999999877652 2
Q ss_pred -hHHhhHHHHHhhhcCCCCccH----HHHHHHHHHHH
Q psy14014 580 -VIQSQVKPALDKLNGDTDVDV----KYFAQEAISSI 611 (615)
Q Consensus 580 -~~~~~~~~~l~~l~~d~d~~v----~~~a~~a~~~~ 611 (615)
.+.+.+..++..+..|...|| |+.|..|+..+
T Consensus 799 ~k~~e~LL~~lddYttd~rGDVGswVReaAm~al~~~ 835 (1133)
T KOG1943|consen 799 EKFRETLLNALDDYTTDSRGDVGSWVREAAMKALSSL 835 (1133)
T ss_pred HHHHHHHHHHHhhcccccCccHHHHHHHHHHHHHHhh
Confidence 223334444445567776665 55565665544
No 39
>KOG1060|consensus
Probab=99.45 E-value=7.9e-10 Score=111.08 Aligned_cols=261 Identities=16% Similarity=0.149 Sum_probs=153.5
Q ss_pred hHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhch--------
Q psy14014 328 ILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGI-------- 399 (615)
Q Consensus 328 l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~-------- 399 (615)
++.....++.+.++.|--+++.+...++... -...+...++.+|.. +.+|+.-.+..+..+......
T Consensus 288 LL~stkpLl~S~n~sVVmA~aql~y~lAP~~----~~~~i~kaLvrLLrs-~~~vqyvvL~nIa~~s~~~~~lF~P~lKs 362 (968)
T KOG1060|consen 288 LLQSTKPLLQSRNPSVVMAVAQLFYHLAPKN----QVTKIAKALVRLLRS-NREVQYVVLQNIATISIKRPTLFEPHLKS 362 (968)
T ss_pred HHHhccHHHhcCCcHHHHHHHhHHHhhCCHH----HHHHHHHHHHHHHhc-CCcchhhhHHHHHHHHhcchhhhhhhhhc
Confidence 3444444556666666667777766665432 123456666666665 455555555555544321100
Q ss_pred ------hHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHH
Q psy14014 400 ------QQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCM 473 (615)
Q Consensus 400 ------~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~ 473 (615)
+......--++.+..++..- ...+++ +.+....++.+.++-..++.+++..++..+. ..+..+.-+.
T Consensus 363 Ffv~ssDp~~vk~lKleiLs~La~es---ni~~IL--rE~q~YI~s~d~~faa~aV~AiGrCA~~~~s--v~~tCL~gLv 435 (968)
T KOG1060|consen 363 FFVRSSDPTQVKILKLEILSNLANES---NISEIL--RELQTYIKSSDRSFAAAAVKAIGRCASRIGS--VTDTCLNGLV 435 (968)
T ss_pred eEeecCCHHHHHHHHHHHHHHHhhhc---cHHHHH--HHHHHHHhcCchhHHHHHHHHHHHHHHhhCc--hhhHHHHHHH
Confidence 00000000011122222211 122223 3455556666667888888999998887765 3466777888
Q ss_pred HhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcC-CCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHh
Q psy14014 474 TWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRD-QNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLN 552 (615)
Q Consensus 474 ~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d-~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~ 552 (615)
.++..++..|-..++..+..+...-..+ ...++..|.+++.. ..+.-|...+|.+|..++..+ ...+.++-.+.+
T Consensus 436 ~Llsshde~Vv~eaV~vIk~Llq~~p~~--h~~ii~~La~lldti~vp~ARA~IiWLige~~e~vp--ri~PDVLR~lak 511 (968)
T KOG1060|consen 436 QLLSSHDELVVAEAVVVIKRLLQKDPAE--HLEILFQLARLLDTILVPAARAGIIWLIGEYCEIVP--RIAPDVLRKLAK 511 (968)
T ss_pred HHHhcccchhHHHHHHHHHHHHhhChHH--HHHHHHHHHHHhhhhhhhhhhceeeeeehhhhhhcc--hhchHHHHHHHH
Confidence 8888889999999999999998763322 23477777776633 366778888899998876532 123344555555
Q ss_pred hCCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHHHHhhh-cCCCCccHHHHHHH
Q psy14014 553 MAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKL-NGDTDVDVKYFAQE 606 (615)
Q Consensus 553 ~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~l-~~d~d~~v~~~a~~ 606 (615)
-..|..+.||..+...-..+.-..... ...+..-+-.| .-|...++|..|..
T Consensus 512 sFs~E~~evKlQILnL~aKLyl~~~~~--~kll~~Yv~~L~~yD~sYDiRDRaRF 564 (968)
T KOG1060|consen 512 SFSDEGDEVKLQILNLSAKLYLTNIDQ--TKLLVQYVFELARYDLSYDIRDRARF 564 (968)
T ss_pred hhccccchhhHHHHHhhhhheEechhh--HHHHHHHHHHHhccCCCcchhHHHHH
Confidence 678999999998888777765332111 22233333333 46888888888764
No 40
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells. 26S proteasome non-ATPase regulatory subunit 5 is one of a number of chaperones that are involved in the assembly of the proteasome. The chaperones dissociate before 26S proteasome formation is complete [].; GO: 0044183 protein binding involved in protein folding
Probab=99.44 E-value=1.2e-09 Score=112.41 Aligned_cols=379 Identities=15% Similarity=0.147 Sum_probs=245.6
Q ss_pred HHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCc---cchhhhHHH
Q psy14014 211 FVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGP---EITKTDLVQ 287 (615)
Q Consensus 211 l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~---~~~~~~l~~ 287 (615)
+...+++.+.+.-..+..++..+..........+...+.+...+.++++.||..+++.++.++..-.. -.....+++
T Consensus 43 lf~~L~~~~~e~v~~~~~iL~~~l~~~~~~~l~~~~~~~L~~gL~h~~~~Vr~l~l~~l~~~~~~~~~~~~~~~~~~l~~ 122 (503)
T PF10508_consen 43 LFDCLNTSNREQVELICDILKRLLSALSPDSLLPQYQPFLQRGLTHPSPKVRRLALKQLGRIARHSEGAAQLLVDNELLP 122 (503)
T ss_pred HHHHHhhcChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHhcCccHHH
Confidence 55555666666667788889888888888777888999999999999999999999998887643211 112357899
Q ss_pred HHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcc-hhh--h
Q psy14014 288 AFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGK-HNT--V 364 (615)
Q Consensus 288 ~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~-~~~--~ 364 (615)
.+..++.|++.+|...|+.+|..++..-.. ....+.+...+.+..++...+..+|.-+.+.+..++..-.. -.. .
T Consensus 123 ~i~~~L~~~d~~Va~~A~~~L~~l~~~~~~--~~~l~~~~~~~~L~~l~~~~~~~vR~Rv~el~v~i~~~S~~~~~~~~~ 200 (503)
T PF10508_consen 123 LIIQCLRDPDLSVAKAAIKALKKLASHPEG--LEQLFDSNLLSKLKSLMSQSSDIVRCRVYELLVEIASHSPEAAEAVVN 200 (503)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHhCCchh--HHHHhCcchHHHHHHHHhccCHHHHHHHHHHHHHHHhcCHHHHHHHHh
Confidence 999999999999999999999999874221 11122233477788888877888888888888877654221 111 1
Q ss_pred hhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhh----hcC
Q psy14014 365 DHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELA----EDS 440 (615)
Q Consensus 365 ~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~----~~~ 440 (615)
..+++.+...++++|.-|+..+++.+..+.+.-..-.+-... ..+ +.+.+.+ .|+
T Consensus 201 sgll~~ll~eL~~dDiLvqlnalell~~La~~~~g~~yL~~~---gi~------------------~~L~~~l~~~~~dp 259 (503)
T PF10508_consen 201 SGLLDLLLKELDSDDILVQLNALELLSELAETPHGLQYLEQQ---GIF------------------DKLSNLLQDSEEDP 259 (503)
T ss_pred ccHHHHHHHHhcCccHHHHHHHHHHHHHHHcChhHHHHHHhC---CHH------------------HHHHHHHhccccCC
Confidence 247888889899888889999999999887622111111000 011 2333333 233
Q ss_pred -CchHH-HHHHHHhHHHHhhhChHh--HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHh-ChHHh-h------hchh
Q psy14014 441 -KWRVR-LAIIEYMPLLAGQLGVEF--FDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQF-GSEWA-Q------STVI 508 (615)
Q Consensus 441 -~~~vr-~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~-~~~~~-~------~~i~ 508 (615)
...+. -..+..++.++..-+..+ .++.++..++.++...+...+..|+.++|.++... |.... . +.++
T Consensus 260 ~~~~~~l~g~~~f~g~la~~~~~~v~~~~p~~~~~l~~~~~s~d~~~~~~A~dtlg~igst~~G~~~L~~~~~~~~~~~l 339 (503)
T PF10508_consen 260 RLSSLLLPGRMKFFGNLARVSPQEVLELYPAFLERLFSMLESQDPTIREVAFDTLGQIGSTVEGKQLLLQKQGPAMKHVL 339 (503)
T ss_pred cccchhhhhHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHhCCHHHHHHHHhhcchHHHHHH
Confidence 11111 123345555554422222 23667777888888899999999999999998543 22211 1 1234
Q ss_pred HHHHhhhcCCCchHHHHHHHHHHHHHhhhCh---hhH---H--------Hh-hHHHHHhhCCCCCchHHHHHHHHHHHHh
Q psy14014 509 PKVVAMSRDQNYLHRMTCLFCINVLAEACGP---TVT---A--------NF-LLPTVLNMAGDNVANVRFNVAKTLQKIG 573 (615)
Q Consensus 509 ~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~---~~~---~--------~~-i~~~l~~~~~D~~~~vr~~a~~~l~~l~ 573 (615)
..+...........|..++.+++.+...... +.. . +. ....+..+++.|=+++|.++...|..++
T Consensus 340 ~~~~~~~~~~~~~lk~r~l~al~~il~~~~~~~~~~i~~~~~~w~~~~~~~~~~~~l~~~~~qPF~elr~a~~~~l~~l~ 419 (503)
T PF10508_consen 340 KAIGDAIKSGSTELKLRALHALASILTSGTDRQDNDILSITESWYESLSGSPLSNLLMSLLKQPFPELRCAAYRLLQALA 419 (503)
T ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHhcCCchHHHHHHHhcCCchHHHHHHHHHHHHHh
Confidence 4444455566777999999999999654332 111 0 11 1116677788899999999999999998
Q ss_pred HhhhhhhHHhhHHHHHhhh---cCCCCccHHHHHHHHHHHHh
Q psy14014 574 PILETNVIQSQVKPALDKL---NGDTDVDVKYFAQEAISSIA 612 (615)
Q Consensus 574 ~~~~~~~~~~~~~~~l~~l---~~d~d~~v~~~a~~a~~~~~ 612 (615)
.+-......-.-...++-+ .++.+.+.+++=.+.++.++
T Consensus 420 ~~~Wg~~~i~~~~gfie~lldr~~E~~K~~ke~K~~ii~~l~ 461 (503)
T PF10508_consen 420 AQPWGQREICSSPGFIEYLLDRSTETTKEGKEAKYDIIKALA 461 (503)
T ss_pred cCHHHHHHHHhCccHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Confidence 6643211111111222222 36667777766666666655
No 41
>COG5064 SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion]
Probab=99.37 E-value=1.5e-10 Score=105.10 Aligned_cols=346 Identities=12% Similarity=0.138 Sum_probs=227.6
Q ss_pred hHHHHHHHhcCC-CChHHHHHHHHHHHHHHHHhCcc---chhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccch
Q psy14014 245 LVMPTLRQCSGD-TSWRVRYMVADKFTDLQKAVGPE---ITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQ 320 (615)
Q Consensus 245 ~l~~~l~~~~~d-~~~~vR~~~~~~l~~l~~~~~~~---~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~ 320 (615)
.++|-+.+++.. ...-....++.++.+++.....+ +.....+|.|++++.+.+.+||+.++.+|+.++..- ..++
T Consensus 114 GvVpRfvefm~~~q~~mlqfEAaWalTNiaSGtt~QTkvVvd~~AVPlfiqlL~s~~~~V~eQavWALGNiAGDS-~~~R 192 (526)
T COG5064 114 GVVPRFVEFMDEIQRDMLQFEAAWALTNIASGTTQQTKVVVDAGAVPLFIQLLSSTEDDVREQAVWALGNIAGDS-EGCR 192 (526)
T ss_pred cccHHHHHHHHhcchhHHHHHHHHHHhhhccCcccceEEEEeCCchHHHHHHHcCchHHHHHHHHHHhccccCCc-hhHH
Confidence 356667776633 33334557788888888654433 123468999999999999999999999999887642 2223
Q ss_pred hHHHHHhhHHHHHHhhCCCCH--HHHHHHHHHHHhhchhhcch---hhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhh
Q psy14014 321 ENIIMTYILPYVKDLVADPNQ--HVKSALASVIMGLSPILGKH---NTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNE 395 (615)
Q Consensus 321 ~~~~~~~l~p~l~~~~~d~~~--~vR~~~~~~l~~l~~~~g~~---~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~ 395 (615)
.-.+....+..+..++.+.-. ..-+.+-+.|.+++..-.+. ....+.+|.+.+++...+++|...|+.+++-+..
T Consensus 193 D~vL~~galeplL~ll~ss~~~ismlRn~TWtLSNlcRGknP~P~w~~isqalpiL~KLiys~D~evlvDA~WAiSYlsD 272 (526)
T COG5064 193 DYVLQCGALEPLLGLLLSSAIHISMLRNATWTLSNLCRGKNPPPDWSNISQALPILAKLIYSRDPEVLVDACWAISYLSD 272 (526)
T ss_pred HHHHhcCchHHHHHHHHhccchHHHHHHhHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHhcc
Confidence 222333344445555554433 55678889999998764442 2355789999999999999999999999887654
Q ss_pred hhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhCh---HhHHHHHHHHH
Q psy14014 396 VIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGV---EFFDEKLNALC 472 (615)
Q Consensus 396 ~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~---~~~~~~l~~~l 472 (615)
...+. .. ++++. |. . +.+.+++.+++-.+..-++..++.+...-.. -......++.+
T Consensus 273 g~~E~-i~---avld~--------g~------~--~RLvElLs~~sa~iqtPalR~vGNIVTG~D~QTqviI~~G~L~a~ 332 (526)
T COG5064 273 GPNEK-IQ---AVLDV--------GI------P--GRLVELLSHESAKIQTPALRSVGNIVTGSDDQTQVIINCGALKAF 332 (526)
T ss_pred CcHHH-HH---HHHhc--------CC------c--HHHHHHhcCccccccCHHHHhhcCeeecCccceehheecccHHHH
Confidence 32111 00 11111 00 0 4677888888888888888888887652211 11223356666
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHhChH---HhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhC--hhhH----H
Q psy14014 473 MTWLVDHVYAIREAATLNLKKLVEQFGSE---WAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACG--PTVT----A 543 (615)
Q Consensus 473 ~~~l~d~~~~vR~~a~~~l~~l~~~~~~~---~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~--~~~~----~ 543 (615)
..+|.++...+|+.|+.++..+...-... ..-..++|.|..++...++..|..||+++.+....+- |+.+ .
T Consensus 333 ~~lLs~~ke~irKEaCWTiSNITAGnteqiqavid~nliPpLi~lls~ae~k~kKEACWAisNatsgg~~~PD~iryLv~ 412 (526)
T COG5064 333 RSLLSSPKENIRKEACWTISNITAGNTEQIQAVIDANLIPPLIHLLSSAEYKIKKEACWAISNATSGGLNRPDIIRYLVS 412 (526)
T ss_pred HHHhcChhhhhhhhhheeecccccCCHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhhhccccCCchHHHHHHH
Confidence 67788888899999999999886532111 1123589999999999999999999999999865432 2221 2
Q ss_pred HhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhh---------hhHH-----hhHHHHHhhhcCCCCccHHHHHHHHHH
Q psy14014 544 NFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILET---------NVIQ-----SQVKPALDKLNGDTDVDVKYFAQEAIS 609 (615)
Q Consensus 544 ~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~---------~~~~-----~~~~~~l~~l~~d~d~~v~~~a~~a~~ 609 (615)
+.+...|..++.-.+..+-..+..++..+...-.. +.+. ......+..+.+..+.++...|...+.
T Consensus 413 qG~IkpLc~~L~~~dNkiiev~LD~~eniLk~Ge~d~~~~~~nin~ya~~vE~Aggmd~I~~~Q~s~n~~iy~KAYsIIe 492 (526)
T COG5064 413 QGFIKPLCDLLDVVDNKIIEVALDAIENILKVGEQDRLRYGKNINIYAVYVEKAGGMDAIHGLQDSVNRTIYDKAYSIIE 492 (526)
T ss_pred ccchhHHHHHHhccCccchhhhHHHHHHHHhhhhHHHHhccCCccHHHHHHHhcccHHHHHHhhhccccHHHHHHHHHHH
Confidence 34455677777655555666677888777654211 1111 123356667777778888888877766
Q ss_pred HH
Q psy14014 610 SI 611 (615)
Q Consensus 610 ~~ 611 (615)
.+
T Consensus 493 ~f 494 (526)
T COG5064 493 KF 494 (526)
T ss_pred HH
Confidence 54
No 42
>KOG1943|consensus
Probab=99.35 E-value=1.2e-08 Score=106.55 Aligned_cols=497 Identities=15% Similarity=0.097 Sum_probs=269.4
Q ss_pred HHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcH--HHHHHHHHHhccccCC-CCCcchhhhc
Q psy14014 15 IAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDED--EVLLALAEQLGTFTPN-VGGPEYVHCL 91 (615)
Q Consensus 15 i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~--~vr~~a~~~l~~l~~~-~~~~~~~~~l 91 (615)
|+.++..+.+.|..+|++|++.++.+..+++++ ...+++.-+..++...+ ..-..++-+|+.++.. +-.+.....+
T Consensus 343 ie~Lls~l~d~dt~VrWSaAKg~grvt~rlp~~-Lad~vi~svid~~~p~e~~~aWHgacLaLAELA~rGlLlps~l~dV 421 (1133)
T KOG1943|consen 343 IEHLLSALSDTDTVVRWSAAKGLGRVTSRLPPE-LADQVIGSVIDLFNPAEDDSAWHGACLALAELALRGLLLPSLLEDV 421 (1133)
T ss_pred HHHHHHhccCCcchhhHHHHHHHHHHHccCcHH-HHHHHHHHHHHhcCcCCchhHHHHHHHHHHHHHhcCCcchHHHHHH
Confidence 777888888899999999999999998888766 55555555555444322 3555777777777642 2224445666
Q ss_pred hHHHhhhhcCc--------hhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChh
Q psy14014 92 LPPLESLATVE--------ETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAG 163 (615)
Q Consensus 92 ~~~l~~l~~~~--------~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~ 163 (615)
+|++..-+.-+ ...||++|+-.+-.++..-.+..+.+.+..+..
T Consensus 422 vplI~kaL~Yd~~~G~~s~G~~VRDaAcY~~WAf~Rays~~~l~p~l~~L~s---------------------------- 473 (1133)
T KOG1943|consen 422 VPLILKALHYDVRRGQHSVGQHVRDAACYVCWAFARAYSPSDLKPVLQSLAS---------------------------- 473 (1133)
T ss_pred HHHHHHHhhhhhhhcccccccchHHHHHHHHHHHHhcCChhhhhHHHHHHHH----------------------------
Confidence 77665444322 246788887777777666665544442211111
Q ss_pred hHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHH
Q psy14014 164 VKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVE 243 (615)
Q Consensus 164 ~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~ 243 (615)
-++...+-|++-.+|++|.-++-+.....+.-+..-.++.. .+.=.-.-|..+...+......++. -..
T Consensus 474 ------~LL~~AlFDrevncRRAAsAAlqE~VGR~~n~p~Gi~Lis~----~dy~sV~~rsNcy~~l~~~ia~~~~-y~~ 542 (1133)
T KOG1943|consen 474 ------ALLIVALFDREVNCRRAASAALQENVGRQGNFPHGISLIST----IDYFSVTNRSNCYLDLCVSIAEFSG-YRE 542 (1133)
T ss_pred ------HHHHHHhcCchhhHhHHHHHHHHHHhccCCCCCCchhhhhh----cchhhhhhhhhHHHHHhHHHHhhhh-HHH
Confidence 12345567888889998888777665433321111111111 1111112233333333222222111 011
Q ss_pred HhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccc--h-
Q psy14014 244 QLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYN--Q- 320 (615)
Q Consensus 244 ~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~--~- 320 (615)
+.+-+.+.+-+.+-+..+|..++.+|.+++...++.. .+..+|.++......+...|.....+.+.+...+..-. .
T Consensus 543 ~~f~~L~t~Kv~HWd~~irelaa~aL~~Ls~~~pk~~-a~~~L~~lld~~ls~~~~~r~g~~la~~ev~~~~~~l~~~~~ 621 (1133)
T KOG1943|consen 543 PVFNHLLTKKVCHWDVKIRELAAYALHKLSLTEPKYL-ADYVLPPLLDSTLSKDASMRHGVFLAAGEVIGALRKLEPVIK 621 (1133)
T ss_pred HHHHHHHhcccccccHHHHHHHHHHHHHHHHhhHHhh-cccchhhhhhhhcCCChHHhhhhHHHHHHHHHHhhhhhhhhh
Confidence 2222333333556677899999999999887665543 34556666666777888889988888888776553221 0
Q ss_pred --hHH---HHHhhHHHHHHhhCCCC--HHHHHHHHHHHHhhchhh---cchhhhhhhHHHHHHhhcCCChhHHHHHHHhh
Q psy14014 321 --ENI---IMTYILPYVKDLVADPN--QHVKSALASVIMGLSPIL---GKHNTVDHLLPLFLSQLKDECPEVRLNIISNL 390 (615)
Q Consensus 321 --~~~---~~~~l~p~l~~~~~d~~--~~vR~~~~~~l~~l~~~~---g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l 390 (615)
.+. ....++|.+.....+.. .-.|.+.+..+..+...- -.+...+.....+.+.+++.+ .+|..|.+++
T Consensus 622 ~l~e~~i~~l~~ii~~~~~~~~~rg~~~lmr~~~~~~Ie~~s~s~~~~~~~~v~e~~~~ll~~~l~~~n-~i~~~av~av 700 (1133)
T KOG1943|consen 622 GLDENRIAGLLSIIPPICDRYFYRGQGTLMRQATLKFIEQLSLSKDRLFQDFVIENWQMLLAQNLTLPN-QIRDAAVSAV 700 (1133)
T ss_pred hhHHHHhhhhhhhccHHHHHHhccchHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHhhcchH-HHHHHHHHHH
Confidence 000 11122333322222222 445666666665543210 112222223334444444444 7888888888
Q ss_pred hHhhhhh--chhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHH
Q psy14014 391 DCVNEVI--GIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKL 468 (615)
Q Consensus 391 ~~l~~~~--~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l 468 (615)
+.++... .++.... .+....+..+.+..+.++|.....+++.+....=.....+.+
T Consensus 701 ~~l~s~y~~~d~~~~~----------------------~li~~~ls~~~~~~~~~~r~g~~lal~~lp~~~i~~~~q~~l 758 (1133)
T KOG1943|consen 701 SDLVSTYVKADEGEEA----------------------PLITRYLSRLTKCSEERIRRGLILALGVLPSELIHRHLQEKL 758 (1133)
T ss_pred HHHHHHHHhcCchhhh----------------------HHHHHHHHHhcCchHHHHHHHHHHHHccCcHHhhchHHHHHH
Confidence 8776432 1111000 000022333334446777877776666554221111122333
Q ss_pred HHHHHHhc-CCcchHHHHHHHHHHHHHHHHhChHH---hhhchhHHHHhhh----cCC----CchHHHHHHHHHHHHHhh
Q psy14014 469 NALCMTWL-VDHVYAIREAATLNLKKLVEQFGSEW---AQSTVIPKVVAMS----RDQ----NYLHRMTCLFCINVLAEA 536 (615)
Q Consensus 469 ~~~l~~~l-~d~~~~vR~~a~~~l~~l~~~~~~~~---~~~~i~~~l~~~~----~d~----~~~~R~~a~~~l~~l~~~ 536 (615)
...++... .|....-|...+.++..+.+.++... ..+.+...|++.+ .|. ...+|..|.+++..+...
T Consensus 759 c~~~l~~~p~d~~a~aR~~~V~al~~v~~~~~~~~~~~~~~k~~e~LL~~lddYttd~rGDVGswVReaAm~al~~~~~~ 838 (1133)
T KOG1943|consen 759 CKLVLELLPSDAWAEARQQNVKALAHVCKTVTSLLFSESIEKFRETLLNALDDYTTDSRGDVGSWVREAAMKALSSLLDT 838 (1133)
T ss_pred HHHHhccCcccccHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhhcccccCccHHHHHHHHHHHHHHhhhhh
Confidence 33333332 33366788889999888888776321 1123444444433 332 457899999999998766
Q ss_pred hC-hhhHHHh-hHHH---HHhhCCCCCchHHHHHHHHHHHHhHh
Q psy14014 537 CG-PTVTANF-LLPT---VLNMAGDNVANVRFNVAKTLQKIGPI 575 (615)
Q Consensus 537 ~~-~~~~~~~-i~~~---l~~~~~D~~~~vr~~a~~~l~~l~~~ 575 (615)
+. ++.+.+. +.+. +.+-.-|+....|..++.++.++...
T Consensus 839 l~~p~~ld~~~i~~~~~~~vqQ~veKIdrlre~a~~~~~qi~~~ 882 (1133)
T KOG1943|consen 839 LSSPKLLDEDSINRIIRYFVQQAVEKIDRLRELAASALNQIVVH 882 (1133)
T ss_pred hcCcccccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhceeec
Confidence 54 4443322 2232 23334466667789999999888654
No 43
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells. 26S proteasome non-ATPase regulatory subunit 5 is one of a number of chaperones that are involved in the assembly of the proteasome. The chaperones dissociate before 26S proteasome formation is complete [].; GO: 0044183 protein binding involved in protein folding
Probab=99.34 E-value=1.2e-08 Score=105.34 Aligned_cols=380 Identities=16% Similarity=0.142 Sum_probs=219.0
Q ss_pred HHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChh----hHHHHHHHHHHHhCCCChHH
Q psy14014 108 DKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAG----VKAELRSHFRNLCQDDTPMV 183 (615)
Q Consensus 108 ~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~----~~~~l~~~l~~l~~d~~~~v 183 (615)
..++.+|..+........+.+.+.+++.+...+++..+|..++..++.+..+-... ...++++.+..++.|++..|
T Consensus 56 ~~~~~iL~~~l~~~~~~~l~~~~~~~L~~gL~h~~~~Vr~l~l~~l~~~~~~~~~~~~~~~~~~l~~~i~~~L~~~d~~V 135 (503)
T PF10508_consen 56 ELICDILKRLLSALSPDSLLPQYQPFLQRGLTHPSPKVRRLALKQLGRIARHSEGAAQLLVDNELLPLIIQCLRDPDLSV 135 (503)
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHhcCccHHHHHHHHHcCCcHHH
Confidence 34444444444444444444444444444444444444444444444333222110 12457778889999999999
Q ss_pred HHHHHHhHHHHHHHhch--hhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhh---HHHhHHHHHHHhcCCCC
Q psy14014 184 RRAAAGKLGELAKVVEV--DYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSD---VEQLVMPTLRQCSGDTS 258 (615)
Q Consensus 184 R~~a~~~l~~l~~~~~~--~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~---~~~~l~~~l~~~~~d~~ 258 (615)
.+.|+.++..+++.-.. ..+.+.+.+.+..++..+++.+|....+.+..++..-+... ....+++.+...+++.+
T Consensus 136 a~~A~~~L~~l~~~~~~~~~l~~~~~~~~L~~l~~~~~~~vR~Rv~el~v~i~~~S~~~~~~~~~sgll~~ll~eL~~dD 215 (503)
T PF10508_consen 136 AKAAIKALKKLASHPEGLEQLFDSNLLSKLKSLMSQSSDIVRCRVYELLVEIASHSPEAAEAVVNSGLLDLLLKELDSDD 215 (503)
T ss_pred HHHHHHHHHHHhCCchhHHHHhCcchHHHHHHHHhccCHHHHHHHHHHHHHHHhcCHHHHHHHHhccHHHHHHHHhcCcc
Confidence 99999999999874322 12233447778888877788999999999888876654321 12247888888888899
Q ss_pred hHHHHHHHHHHHHHHHHhCc-c-chhhhHHHHHHHhhcCCcHHHHH------HHHHHHHHHHhhccccchhHHHHHhhHH
Q psy14014 259 WRVRYMVADKFTDLQKAVGP-E-ITKTDLVQAFQMLLKDSEAEVRA------AAANKVRDFCQNLDAYNQENIIMTYILP 330 (615)
Q Consensus 259 ~~vR~~~~~~l~~l~~~~~~-~-~~~~~l~~~l~~~l~d~~~~vr~------~a~~~l~~~~~~~~~~~~~~~~~~~l~p 330 (615)
.-+|..+++.+..++..-.. + .....+++.+...+.+...+-|. +.++.++.+... .+... ....+.++.
T Consensus 216 iLvqlnalell~~La~~~~g~~yL~~~gi~~~L~~~l~~~~~dp~~~~~~l~g~~~f~g~la~~-~~~~v-~~~~p~~~~ 293 (503)
T PF10508_consen 216 ILVQLNALELLSELAETPHGLQYLEQQGIFDKLSNLLQDSEEDPRLSSLLLPGRMKFFGNLARV-SPQEV-LELYPAFLE 293 (503)
T ss_pred HHHHHHHHHHHHHHHcChhHHHHHHhCCHHHHHHHHHhccccCCcccchhhhhHHHHHHHHHhc-ChHHH-HHHHHHHHH
Confidence 99999999999999872111 1 12235677777776554322222 222344444433 11111 112355666
Q ss_pred HHHHhhCCCCHHHHHHHHHHHHhhchhhc-chhh-------hhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHH
Q psy14014 331 YVKDLVADPNQHVKSALASVIMGLSPILG-KHNT-------VDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQW 402 (615)
Q Consensus 331 ~l~~~~~d~~~~vR~~~~~~l~~l~~~~g-~~~~-------~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~ 402 (615)
.+..++++.+...+..|.++++.++.... .... ...++..+.........++|..++.+++.+.....+..-
T Consensus 294 ~l~~~~~s~d~~~~~~A~dtlg~igst~~G~~~L~~~~~~~~~~~l~~~~~~~~~~~~~lk~r~l~al~~il~~~~~~~~ 373 (503)
T PF10508_consen 294 RLFSMLESQDPTIREVAFDTLGQIGSTVEGKQLLLQKQGPAMKHVLKAIGDAIKSGSTELKLRALHALASILTSGTDRQD 373 (503)
T ss_pred HHHHHhCCCChhHHHHHHHHHHHHhCCHHHHHHHHhhcchHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhcCCCCch
Confidence 77778889999999999999999986543 2222 123344444455556678999999999888654332111
Q ss_pred HHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhh-ChHhHH--HHHHHHHHHhcCCc
Q psy14014 403 RVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQL-GVEFFD--EKLNALCMTWLVDH 479 (615)
Q Consensus 403 ~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~-~~~~~~--~~l~~~l~~~l~d~ 479 (615)
.+-..+ ....-..++..... ..+...++.+-+.+|.++...+..++..- |...+. +.++.++++.-.++
T Consensus 374 ~~i~~~---~~~w~~~~~~~~~~-----~~l~~~~~qPF~elr~a~~~~l~~l~~~~Wg~~~i~~~~gfie~lldr~~E~ 445 (503)
T PF10508_consen 374 NDILSI---TESWYESLSGSPLS-----NLLMSLLKQPFPELRCAAYRLLQALAAQPWGQREICSSPGFIEYLLDRSTET 445 (503)
T ss_pred HHHHHH---HHHHHHHhcCCchH-----HHHHHHhcCCchHHHHHHHHHHHHHhcCHHHHHHHHhCccHHhhhcCCCCCC
Confidence 110000 11001111111000 14556667777778888888887776532 221111 23444444444455
Q ss_pred chHHHHHHHHHHHHHHHH
Q psy14014 480 VYAIREAATLNLKKLVEQ 497 (615)
Q Consensus 480 ~~~vR~~a~~~l~~l~~~ 497 (615)
+...+++=..++..+++.
T Consensus 446 ~K~~ke~K~~ii~~l~~~ 463 (503)
T PF10508_consen 446 TKEGKEAKYDIIKALAKS 463 (503)
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 666666666666666644
No 44
>KOG4224|consensus
Probab=99.33 E-value=1.1e-10 Score=106.87 Aligned_cols=346 Identities=14% Similarity=0.125 Sum_probs=242.6
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchh---hhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhH
Q psy14014 246 VMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITK---TDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQEN 322 (615)
Q Consensus 246 l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~---~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~ 322 (615)
....+..++.+++..+..++...+|+++...++.... ..+-+.+.+++.|.. +||..+..++..+...- +.+.+
T Consensus 86 s~epvl~llqs~d~~Iq~aa~~alGnlAVn~enk~liv~l~Gl~~Li~qmmtd~v-evqcnaVgCitnLaT~d--~nk~k 162 (550)
T KOG4224|consen 86 SNEPVLALLQSCDKCIQCAAGEALGNLAVNMENKGLIVSLLGLDLLILQMMTDGV-EVQCNAVGCITNLATFD--SNKVK 162 (550)
T ss_pred hhhHHHHHHhCcchhhhhhhhhhhccceeccCCceEEEeccChHHHHHHhcCCCc-EEEeeehhhhhhhhccc--cchhh
Confidence 3444556778889999999999999999887766432 234456777776665 77888888888777642 22221
Q ss_pred HHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchh--hhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchh
Q psy14014 323 IIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHN--TVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQ 400 (615)
Q Consensus 323 ~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~--~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~ 400 (615)
.-....+..+.++.+.++.++|+.+..++..+........ ...--+|.++.+++..+..||..+..+++.+.-. .
T Consensus 163 iA~sGaL~pltrLakskdirvqrnatgaLlnmThs~EnRr~LV~aG~lpvLVsll~s~d~dvqyycttaisnIaVd---~ 239 (550)
T KOG4224|consen 163 IARSGALEPLTRLAKSKDIRVQRNATGALLNMTHSRENRRVLVHAGGLPVLVSLLKSGDLDVQYYCTTAISNIAVD---R 239 (550)
T ss_pred hhhccchhhhHhhcccchhhHHHHHHHHHHHhhhhhhhhhhhhccCCchhhhhhhccCChhHHHHHHHHhhhhhhh---H
Confidence 2122233345568899999999999999998876654321 2223579999999999999999999888765311 1
Q ss_pred HHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhh--ChHhHHHHHHHHHHHhcCC
Q psy14014 401 QWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQL--GVEFFDEKLNALCMTWLVD 478 (615)
Q Consensus 401 ~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~--~~~~~~~~l~~~l~~~l~d 478 (615)
.-++.+ .+.-|.+. |.+..++++++.+++..+..++..++... -.+.....-+|.+.+++++
T Consensus 240 ~~Rk~L--aqaep~lv--------------~~Lv~Lmd~~s~kvkcqA~lALrnlasdt~Yq~eiv~ag~lP~lv~Llqs 303 (550)
T KOG4224|consen 240 RARKIL--AQAEPKLV--------------PALVDLMDDGSDKVKCQAGLALRNLASDTEYQREIVEAGSLPLLVELLQS 303 (550)
T ss_pred HHHHHH--HhcccchH--------------HHHHHHHhCCChHHHHHHHHHHhhhcccchhhhHHHhcCCchHHHHHHhC
Confidence 111221 11122222 78889999999999999999999987533 2333444568899999999
Q ss_pred cchHHHHHHHHHHHHHHHHhChHH-hh-hchhHHHHhhhcCC-CchHHHHHHHHHHHHHhhhCh---hhHHHhhHHHHHh
Q psy14014 479 HVYAIREAATLNLKKLVEQFGSEW-AQ-STVIPKVVAMSRDQ-NYLHRMTCLFCINVLAEACGP---TVTANFLLPTVLN 552 (615)
Q Consensus 479 ~~~~vR~~a~~~l~~l~~~~~~~~-~~-~~i~~~l~~~~~d~-~~~~R~~a~~~l~~l~~~~~~---~~~~~~i~~~l~~ 552 (615)
+.-..-.+.+.|+..+.-.-+.+. .. .-++..|..++.-. |...+..|..++..++-.... .++.....|.+..
T Consensus 304 ~~~plilasVaCIrnisihplNe~lI~dagfl~pLVrlL~~~dnEeiqchAvstLrnLAasse~n~~~i~esgAi~kl~e 383 (550)
T KOG4224|consen 304 PMGPLILASVACIRNISIHPLNEVLIADAGFLRPLVRLLRAGDNEEIQCHAVSTLRNLAASSEHNVSVIRESGAIPKLIE 383 (550)
T ss_pred cchhHHHHHHHHHhhcccccCcccceecccchhHHHHHHhcCCchhhhhhHHHHHHHHhhhhhhhhHHHhhcCchHHHHH
Confidence 988888888888888765433321 11 12455566665544 555788888888888754322 2345678899999
Q ss_pred hCCCCCchHHHHHHHHHHHHhHhh--hhhhHHhhHHHHHhhhcCCCCccHHHHHHHHHHHHhh
Q psy14014 553 MAGDNVANVRFNVAKTLQKIGPIL--ETNVIQSQVKPALDKLNGDTDVDVKYFAQEAISSIAD 613 (615)
Q Consensus 553 ~~~D~~~~vr~~a~~~l~~l~~~~--~~~~~~~~~~~~l~~l~~d~d~~v~~~a~~a~~~~~~ 613 (615)
++-|.--.||.....+++++.-.- ........+.|++..++.++.++||.+|.+|+..+.+
T Consensus 384 L~lD~pvsvqseisac~a~Lal~d~~k~~lld~gi~~iLIp~t~s~s~Ev~gNaAaAL~Nlss 446 (550)
T KOG4224|consen 384 LLLDGPVSVQSEISACIAQLALNDNDKEALLDSGIIPILIPWTGSESEEVRGNAAAALINLSS 446 (550)
T ss_pred HHhcCChhHHHHHHHHHHHHHhccccHHHHhhcCCcceeecccCccchhhcccHHHHHHhhhh
Confidence 999999999999999998886322 2234456678888888899999999999999998765
No 45
>KOG1060|consensus
Probab=99.31 E-value=5.3e-08 Score=98.34 Aligned_cols=483 Identities=16% Similarity=0.136 Sum_probs=288.8
Q ss_pred HHHHHHHhcCccHHHHHHHHhcH-HHHHHHhCcchhhccchhhhhhhcCCcH-HHHHHHHHHhccccCCCCCcchhhhch
Q psy14014 15 IAVLIDELKNEDVQLRLNSIKKL-STIALALGQERTRGELIPFLTETIYDED-EVLLALAEQLGTFTPNVGGPEYVHCLL 92 (615)
Q Consensus 15 i~~ll~~l~s~d~~~R~~a~~~l-~~~~~~~~~~~~~~~ll~~l~~~~~~~~-~vr~~a~~~l~~l~~~~~~~~~~~~l~ 92 (615)
+..+|+. +.|..+ ..|++.+ +.+++ |.+ ...+.|-+...+..++ +|++-+--=|-++++.-.+.. =-=+
T Consensus 40 L~~lLdS--nkd~~K-leAmKRIia~iA~--G~d--vS~~Fp~VVKNVaskn~EVKkLVyvYLlrYAEeqpdLA--LLSI 110 (968)
T KOG1060|consen 40 LKQLLDS--NKDSLK-LEAMKRIIALIAK--GKD--VSLLFPAVVKNVASKNIEVKKLVYVYLLRYAEEQPDLA--LLSI 110 (968)
T ss_pred HHHHHhc--cccHHH-HHHHHHHHHHHhc--CCc--HHHHHHHHHHHhhccCHHHHHHHHHHHHHHhhcCCCce--eeeH
Confidence 4444443 344444 4566554 44454 222 3456666555555555 799888777777776321110 0114
Q ss_pred HHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHH
Q psy14014 93 PPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHF 172 (615)
Q Consensus 93 ~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l 172 (615)
..++.-+.|+++.+|-.|+.+|..+- -..+.+.++-.++..+.|+...+|..|+..+..+|..-+ +...++...+
T Consensus 111 ntfQk~L~DpN~LiRasALRvlSsIR----vp~IaPI~llAIk~~~~D~s~yVRk~AA~AIpKLYsLd~-e~k~qL~e~I 185 (968)
T KOG1060|consen 111 NTFQKALKDPNQLIRASALRVLSSIR----VPMIAPIMLLAIKKAVTDPSPYVRKTAAHAIPKLYSLDP-EQKDQLEEVI 185 (968)
T ss_pred HHHHhhhcCCcHHHHHHHHHHHHhcc----hhhHHHHHHHHHHHHhcCCcHHHHHHHHHhhHHHhcCCh-hhHHHHHHHH
Confidence 45788889999999999998887652 233456677778888999999999999999999986544 4445888999
Q ss_pred HHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHh---hccCchhHHHHHHHHHHHHHhhcCh----------
Q psy14014 173 RNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNL---AQDEQDSVRLLAVEACVSIASLLSQ---------- 239 (615)
Q Consensus 173 ~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~---~~d~~~~vr~~a~~~l~~l~~~~~~---------- 239 (615)
..++.|.++.|--.|+-++.++|-. ....|-+.+.++ +.|-+++=+-..+..|...++.--.
T Consensus 186 ~~LLaD~splVvgsAv~AF~evCPe-----rldLIHknyrklC~ll~dvdeWgQvvlI~mL~RYAR~~l~~P~~~~~~~e 260 (968)
T KOG1060|consen 186 KKLLADRSPLVVGSAVMAFEEVCPE-----RLDLIHKNYRKLCRLLPDVDEWGQVVLINMLTRYARHQLPDPTVVDSSLE 260 (968)
T ss_pred HHHhcCCCCcchhHHHHHHHHhchh-----HHHHhhHHHHHHHhhccchhhhhHHHHHHHHHHHHHhcCCCccccccccc
Confidence 9999999999999998888887642 123344444444 3466666666667777666654210
Q ss_pred ---------------------hhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcH
Q psy14014 240 ---------------------SDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEA 298 (615)
Q Consensus 240 ---------------------~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~ 298 (615)
+.-...+++...-++...+..|-.++++.+..++... ....+...|.+++... .
T Consensus 261 ~n~~~~~~~~~~~~~~~P~~~d~D~~lLL~stkpLl~S~n~sVVmA~aql~y~lAP~~----~~~~i~kaLvrLLrs~-~ 335 (968)
T KOG1060|consen 261 DNGRSCNLKDKYNEIRTPYVNDPDLKLLLQSTKPLLQSRNPSVVMAVAQLFYHLAPKN----QVTKIAKALVRLLRSN-R 335 (968)
T ss_pred cCcccccccccccccCCCcccCccHHHHHHhccHHHhcCCcHHHHHHHhHHHhhCCHH----HHHHHHHHHHHHHhcC-C
Confidence 0111224444455667777888888888887777542 2346777788877554 4
Q ss_pred HHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhh-CCCCH-HHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhc
Q psy14014 299 EVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLV-ADPNQ-HVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLK 376 (615)
Q Consensus 299 ~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~-~d~~~-~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~ 376 (615)
++|...++++..++..-+ ..+.|+++... ...++ .++.-=++.|..++. +.....+++-|.-.++
T Consensus 336 ~vqyvvL~nIa~~s~~~~---------~lF~P~lKsFfv~ssDp~~vk~lKleiLs~La~----esni~~ILrE~q~YI~ 402 (968)
T KOG1060|consen 336 EVQYVVLQNIATISIKRP---------TLFEPHLKSFFVRSSDPTQVKILKLEILSNLAN----ESNISEILRELQTYIK 402 (968)
T ss_pred cchhhhHHHHHHHHhcch---------hhhhhhhhceEeecCCHHHHHHHHHHHHHHHhh----hccHHHHHHHHHHHHh
Confidence 778888888888776432 33556666532 22222 333333444444433 2234457777777777
Q ss_pred CCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHH
Q psy14014 377 DECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLA 456 (615)
Q Consensus 377 d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~ 456 (615)
+.+.++...++++++.+....+. |...+ + .-+..++++.+..|-..++..+..+.
T Consensus 403 s~d~~faa~aV~AiGrCA~~~~s--v~~tC-----L------------------~gLv~Llsshde~Vv~eaV~vIk~Ll 457 (968)
T KOG1060|consen 403 SSDRSFAAAAVKAIGRCASRIGS--VTDTC-----L------------------NGLVQLLSSHDELVVAEAVVVIKRLL 457 (968)
T ss_pred cCchhHHHHHHHHHHHHHHhhCc--hhhHH-----H------------------HHHHHHHhcccchhHHHHHHHHHHHH
Confidence 76667888888888877665542 33322 2 24455666677777777777777776
Q ss_pred hhhChHhHHHHHHHHHHHhcCC-cchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHh
Q psy14014 457 GQLGVEFFDEKLNALCMTWLVD-HVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAE 535 (615)
Q Consensus 457 ~~~~~~~~~~~l~~~l~~~l~d-~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~ 535 (615)
+.-..+. ..++..+.+++.. ..+.-|.+.++.+|..+.... .....++..+.+-+.+..+.+|...+.....+.-
T Consensus 458 q~~p~~h--~~ii~~La~lldti~vp~ARA~IiWLige~~e~vp--ri~PDVLR~laksFs~E~~evKlQILnL~aKLyl 533 (968)
T KOG1060|consen 458 QKDPAEH--LEILFQLARLLDTILVPAARAGIIWLIGEYCEIVP--RIAPDVLRKLAKSFSDEGDEVKLQILNLSAKLYL 533 (968)
T ss_pred hhChHHH--HHHHHHHHHHhhhhhhhhhhceeeeeehhhhhhcc--hhchHHHHHHHHhhccccchhhHHHHHhhhhheE
Confidence 6443332 1233334444421 234455555666666554321 1123344445555677777788776665555532
Q ss_pred hhChhhHHHhhHHHHHhhC-CCCCchHHHHH
Q psy14014 536 ACGPTVTANFLLPTVLNMA-GDNVANVRFNV 565 (615)
Q Consensus 536 ~~~~~~~~~~i~~~l~~~~-~D~~~~vr~~a 565 (615)
.-. +. ...+...+..+. -|...++|..+
T Consensus 534 ~~~-~~-~kll~~Yv~~L~~yD~sYDiRDRa 562 (968)
T KOG1060|consen 534 TNI-DQ-TKLLVQYVFELARYDLSYDIRDRA 562 (968)
T ss_pred ech-hh-HHHHHHHHHHHhccCCCcchhHHH
Confidence 211 11 122333333332 46666666643
No 46
>KOG1061|consensus
Probab=99.26 E-value=1.9e-08 Score=102.04 Aligned_cols=513 Identities=14% Similarity=0.159 Sum_probs=287.1
Q ss_pred CCCCCCCCCCCcchHHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcH-HHHHHHHHHhcccc
Q psy14014 1 MASSDSAPDDSLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDED-EVLLALAEQLGTFT 79 (615)
Q Consensus 1 ~~~~~~~~~~~~~~i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~-~vr~~a~~~l~~l~ 79 (615)
|++|--+.+++...+..+..++.|.-+..|..|++.+-.- -.+|.+ . ..+-|=+.......+ +.++..-.=+...+
T Consensus 1 M~d~k~F~~~~k~ei~elks~l~s~~~~kr~~a~kkvIa~-Mt~G~D-v-SslF~dvvk~~~T~dlelKKlvyLYl~nYa 77 (734)
T KOG1061|consen 1 MSDSKYFSTDKKGEIPELKSQLNSQSKEKRKDAVKKVIAY-MTVGKD-V-SSLFPDVVKCMQTRDLELKKLVYLYLMNYA 77 (734)
T ss_pred CCCccccCcchhhhchHHHHHhhhhhhhhHHHHHHHHHhc-CccCcc-h-HhhhHHHHhhcccCCchHHHHHHHHHHHhh
Confidence 4555566677767777788888777777777777654433 234443 1 122222223333333 45554444444444
Q ss_pred CCCCCcchhhhchHHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccC
Q psy14014 80 PNVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPR 159 (615)
Q Consensus 80 ~~~~~~~~~~~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~ 159 (615)
.. .+......++.+..-..|+++.+|..|+..++.+ .
T Consensus 78 ~~--~P~~a~~avnt~~kD~~d~np~iR~lAlrtm~~l----~------------------------------------- 114 (734)
T KOG1061|consen 78 KG--KPDLAILAVNTFLKDCEDPNPLIRALALRTMGCL----R------------------------------------- 114 (734)
T ss_pred cc--CchHHHhhhhhhhccCCCCCHHHHHHHhhceeeE----e-------------------------------------
Confidence 31 1222223344455555666777777776544422 1
Q ss_pred CChhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcCh
Q psy14014 160 VTAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQ 239 (615)
Q Consensus 160 ~~~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~ 239 (615)
-+...+++..-+...+.|.++.||+.++-+...+...-+.......+++.+..++.|+++.|-..|+.++..+.+.-+.
T Consensus 115 -v~~i~ey~~~Pl~~~l~d~~~yvRktaa~~vakl~~~~~~~~~~~gl~~~L~~ll~D~~p~VVAnAlaaL~eI~e~~~~ 193 (734)
T KOG1061|consen 115 -VDKITEYLCDPLLKCLKDDDPYVRKTAAVCVAKLFDIDPDLVEDSGLVDALKDLLSDSNPMVVANALAALSEIHESHPS 193 (734)
T ss_pred -ehHHHHHHHHHHHHhccCCChhHHHHHHHHHHHhhcCChhhccccchhHHHHHHhcCCCchHHHHHHHHHHHHHHhCCC
Confidence 1122344445567788999999999999888887654444444567889999999999999999999999998877653
Q ss_pred hh---HHHhHHHHHHHhcCC-CChHHHHHHHHHHHHHHHHhCccc-hhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhh
Q psy14014 240 SD---VEQLVMPTLRQCSGD-TSWRVRYMVADKFTDLQKAVGPEI-TKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQN 314 (615)
Q Consensus 240 ~~---~~~~l~~~l~~~~~d-~~~~vR~~~~~~l~~l~~~~~~~~-~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~ 314 (615)
.. ....++..+.+.++. ..|. + +..+..++...+++. ....++..+...+.+.++.|...+.+.+-.....
T Consensus 194 ~~~~~l~~~~~~~lL~al~ec~EW~-q---i~IL~~l~~y~p~d~~ea~~i~~r~~p~Lqh~n~avvlsavKv~l~~~~~ 269 (734)
T KOG1061|consen 194 VNLLELNPQLINKLLEALNECTEWG-Q---IFILDCLAEYVPKDSREAEDICERLTPRLQHANSAVVLSAVKVILQLVKY 269 (734)
T ss_pred CCcccccHHHHHHHHHHHHHhhhhh-H---HHHHHHHHhcCCCCchhHHHHHHHhhhhhccCCcceEeehHHHHHHHHHH
Confidence 21 111222222222322 3342 2 334455555555543 2346777778888899988888888888777765
Q ss_pred ccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhh
Q psy14014 315 LDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVN 394 (615)
Q Consensus 315 ~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~ 394 (615)
+.. ....+...+-|.+..++..+. .+.-.++.-+..+...... .+...+ ..|.--..| --.|+..=++.+..++
T Consensus 270 ~~~--~~~~~~~K~~~pl~tlls~~~-e~qyvaLrNi~lil~~~p~-~~~~~~-~~Ff~kynD-PiYvK~eKleil~~la 343 (734)
T KOG1061|consen 270 LKQ--VNELLFKKVAPPLVTLLSSES-EIQYVALRNINLILQKRPE-ILKVEI-KVFFCKYND-PIYVKLEKLEILIELA 343 (734)
T ss_pred HHH--HHHHHHHHhcccceeeecccc-hhhHHHHhhHHHHHHhChH-HHHhHh-HeeeeecCC-chhhHHHHHHHHHHHh
Confidence 543 112233444444444444443 4444444444433322111 110000 001100111 1122222222222211
Q ss_pred hhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHH
Q psy14014 395 EVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMT 474 (615)
Q Consensus 395 ~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~ 474 (615)
. .....+ .+ +.+.+...+.+...-..++.+++.++...... ..+++.+++
T Consensus 344 ~---~~nl~q------vl------------------~El~eYatevD~~fvrkaIraig~~aik~e~~---~~cv~~lLe 393 (734)
T KOG1061|consen 344 N---DANLAQ------VL------------------AELKEYATEVDVDFVRKAVRAIGRLAIKAEQS---NDCVSILLE 393 (734)
T ss_pred h---HhHHHH------HH------------------HHHHHhhhhhCHHHHHHHHHHhhhhhhhhhhh---hhhHHHHHH
Confidence 1 111111 01 23333334455556667888888887655443 567888888
Q ss_pred hcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcC-CCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhh
Q psy14014 475 WLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRD-QNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNM 553 (615)
Q Consensus 475 ~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d-~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~ 553 (615)
+++-...-+-..+...+..+.+.+.... +.+++.+-..... .+|..|.+.++.+|+-++.++.. ..++..+.+-
T Consensus 394 ll~~~~~yvvqE~~vvi~dilRkyP~~~--~~vv~~l~~~~~sl~epeak~amiWilg~y~~~i~~a---~elL~~f~en 468 (734)
T KOG1061|consen 394 LLETKVDYVVQEAIVVIRDILRKYPNKY--ESVVAILCENLDSLQEPEAKAALIWILGEYAERIENA---LELLESFLEN 468 (734)
T ss_pred HHhhcccceeeehhHHHHhhhhcCCCch--hhhhhhhcccccccCChHHHHHHHHHHhhhhhccCcH---HHHHHHHHhh
Confidence 8875555566677778888887765432 4566655443332 57788999999999988877643 3456666777
Q ss_pred CCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHHHHhhhc-CCCCccHHHHHHH
Q psy14014 554 AGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKLN-GDTDVDVKYFAQE 606 (615)
Q Consensus 554 ~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~l~-~d~d~~v~~~a~~ 606 (615)
..|....|+.....+.-++.-..++ .-.+.+..++..-. ..+++|+|..+..
T Consensus 469 ~~dE~~~Vql~LLta~ik~Fl~~p~-~tq~~l~~vL~~~~~d~~~~dlrDr~l~ 521 (734)
T KOG1061|consen 469 FKDETAEVQLELLTAAIKLFLKKPT-ETQELLQGVLPLATADTDNPDLRDRGLI 521 (734)
T ss_pred cccchHHHHHHHHHHHHHHHhcCCc-cHHHHHHHHHhhhhccccChhhhhhHHH
Confidence 7888888888777776665433332 33344444444444 3446688887653
No 47
>COG5064 SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion]
Probab=99.26 E-value=1.1e-09 Score=99.54 Aligned_cols=350 Identities=13% Similarity=0.080 Sum_probs=225.5
Q ss_pred hHhhhHHHHHHhhc-cCchhHHHHHHHHHHHHHhhcChhh---HHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhC-
Q psy14014 203 LKTDIIPMFVNLAQ-DEQDSVRLLAVEACVSIASLLSQSD---VEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVG- 277 (615)
Q Consensus 203 ~~~~ll~~l~~~~~-d~~~~vr~~a~~~l~~l~~~~~~~~---~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~- 277 (615)
.....+|-|.+++. .+..-..-.|..++..+++...... .....+|.+.+++.+++..||..++.+||+++.-..
T Consensus 111 IdaGvVpRfvefm~~~q~~mlqfEAaWalTNiaSGtt~QTkvVvd~~AVPlfiqlL~s~~~~V~eQavWALGNiAGDS~~ 190 (526)
T COG5064 111 IDAGVVPRFVEFMDEIQRDMLQFEAAWALTNIASGTTQQTKVVVDAGAVPLFIQLLSSTEDDVREQAVWALGNIAGDSEG 190 (526)
T ss_pred HhccccHHHHHHHHhcchhHHHHHHHHHHhhhccCcccceEEEEeCCchHHHHHHHcCchHHHHHHHHHHhccccCCchh
Confidence 34567888888884 4445566677888888877665432 123478999999999999999999999999874211
Q ss_pred --ccchhhhHHHHHHHhhcCCcH--HHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHh
Q psy14014 278 --PEITKTDLVQAFQMLLKDSEA--EVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMG 353 (615)
Q Consensus 278 --~~~~~~~l~~~l~~~l~d~~~--~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~ 353 (615)
+.......+..++.++...-+ .+-..+...|..++..-.+.... ......+|.|.+++...++.|-.-+++++..
T Consensus 191 ~RD~vL~~galeplL~ll~ss~~~ismlRn~TWtLSNlcRGknP~P~w-~~isqalpiL~KLiys~D~evlvDA~WAiSY 269 (526)
T COG5064 191 CRDYVLQCGALEPLLGLLLSSAIHISMLRNATWTLSNLCRGKNPPPDW-SNISQALPILAKLIYSRDPEVLVDACWAISY 269 (526)
T ss_pred HHHHHHhcCchHHHHHHHHhccchHHHHHHhHHHHHHhhCCCCCCCch-HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Confidence 111112234445555544443 45557888888888754332221 2356789999999999999999999999999
Q ss_pred hchhhcc--hhhhh-hhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhh
Q psy14014 354 LSPILGK--HNTVD-HLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNA 430 (615)
Q Consensus 354 l~~~~g~--~~~~~-~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~ 430 (615)
+...... +...+ -+.+.++++|.+++..|+.-|++..+.++... +.-.+-+--+.++
T Consensus 270 lsDg~~E~i~avld~g~~~RLvElLs~~sa~iqtPalR~vGNIVTG~--D~QTqviI~~G~L------------------ 329 (526)
T COG5064 270 LSDGPNEKIQAVLDVGIPGRLVELLSHESAKIQTPALRSVGNIVTGS--DDQTQVIINCGAL------------------ 329 (526)
T ss_pred hccCcHHHHHHHHhcCCcHHHHHHhcCccccccCHHHHhhcCeeecC--ccceehheecccH------------------
Confidence 8764322 11111 34577899999999999999999888775432 2211111000112
Q ss_pred HHHHHhhhcCCchHHHHHHHHhHHHHhhhCh---HhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhC--hHHh--
Q psy14014 431 LSIVELAEDSKWRVRLAIIEYMPLLAGQLGV---EFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFG--SEWA-- 503 (615)
Q Consensus 431 ~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~---~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~--~~~~-- 503 (615)
+.+..+++++..++|..+|..+..+...-.. ......++|.+..++..-.+.+|+.|+.++........ ++..
T Consensus 330 ~a~~~lLs~~ke~irKEaCWTiSNITAGnteqiqavid~nliPpLi~lls~ae~k~kKEACWAisNatsgg~~~PD~iry 409 (526)
T COG5064 330 KAFRSLLSSPKENIRKEACWTISNITAGNTEQIQAVIDANLIPPLIHLLSSAEYKIKKEACWAISNATSGGLNRPDIIRY 409 (526)
T ss_pred HHHHHHhcChhhhhhhhhheeecccccCCHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhhhccccCCchHHHH
Confidence 3455567788889999999999888542211 22446789999999998899999999999887765421 1211
Q ss_pred --hhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhh------------HH--HhhHHHHHhhCCCCCchHHHHHHH
Q psy14014 504 --QSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTV------------TA--NFLLPTVLNMAGDNVANVRFNVAK 567 (615)
Q Consensus 504 --~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~------------~~--~~i~~~l~~~~~D~~~~vr~~a~~ 567 (615)
.+-++..|-+++.-.+-.+-+.++.|+..+.+....+. +. ...+..+..+.+..+..+-..|..
T Consensus 410 Lv~qG~IkpLc~~L~~~dNkiiev~LD~~eniLk~Ge~d~~~~~~nin~ya~~vE~Aggmd~I~~~Q~s~n~~iy~KAYs 489 (526)
T COG5064 410 LVSQGFIKPLCDLLDVVDNKIIEVALDAIENILKVGEQDRLRYGKNINIYAVYVEKAGGMDAIHGLQDSVNRTIYDKAYS 489 (526)
T ss_pred HHHccchhHHHHHHhccCccchhhhHHHHHHHHhhhhHHHHhccCCccHHHHHHHhcccHHHHHHhhhccccHHHHHHHH
Confidence 12244555555554444455666777777765422111 11 234555666666666667666665
Q ss_pred HHHHHh
Q psy14014 568 TLQKIG 573 (615)
Q Consensus 568 ~l~~l~ 573 (615)
.+..++
T Consensus 490 IIe~fF 495 (526)
T COG5064 490 IIEKFF 495 (526)
T ss_pred HHHHHc
Confidence 555443
No 48
>KOG2259|consensus
Probab=99.22 E-value=1.5e-08 Score=100.16 Aligned_cols=134 Identities=15% Similarity=0.145 Sum_probs=99.9
Q ss_pred HHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHH
Q psy14014 433 IVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVV 512 (615)
Q Consensus 433 i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~ 512 (615)
+...++|+-+.||.+++..+..++..-. -|...-+.++.++++|+...||..|+.+|..|+..+. ..+..++.++
T Consensus 378 ~VhGlEDEf~EVR~AAV~Sl~~La~ssP--~FA~~aldfLvDMfNDE~~~VRL~ai~aL~~Is~~l~---i~eeql~~il 452 (823)
T KOG2259|consen 378 LVHGLEDEFYEVRRAAVASLCSLATSSP--GFAVRALDFLVDMFNDEIEVVRLKAIFALTMISVHLA---IREEQLRQIL 452 (823)
T ss_pred eeeechHHHHHHHHHHHHHHHHHHcCCC--CcHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhe---ecHHHHHHHH
Confidence 4456778889999999999999975332 2566678889999999999999999999999998743 4567899999
Q ss_pred hhhcCCCchHHHHHHHHHHHHHhhhChh---hHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhh
Q psy14014 513 AMSRDQNYLHRMTCLFCINVLAEACGPT---VTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILE 577 (615)
Q Consensus 513 ~~~~d~~~~~R~~a~~~l~~l~~~~~~~---~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~ 577 (615)
..+.|.+..+|.+.-..++.. ...+.+ .....++..|.++-+|.+. ...+++.+.+..+
T Consensus 453 ~~L~D~s~dvRe~l~elL~~~-~~~d~~~i~m~v~~lL~~L~kyPqDrd~-----i~~cm~~iGqnH~ 514 (823)
T KOG2259|consen 453 ESLEDRSVDVREALRELLKNA-RVSDLECIDMCVAHLLKNLGKYPQDRDE-----ILRCMGRIGQNHR 514 (823)
T ss_pred HHHHhcCHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHHhhhCCCCcHH-----HHHHHHHHhccCh
Confidence 999999999999877666553 222222 2234566666666677554 6677777776543
No 49
>KOG1062|consensus
Probab=99.21 E-value=1.8e-07 Score=95.01 Aligned_cols=399 Identities=12% Similarity=0.118 Sum_probs=225.1
Q ss_pred hhhHHhhhhhhccCCChhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHH
Q psy14014 146 RTSACGLFSVCYPRVTAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLL 225 (615)
Q Consensus 146 r~~a~~~l~~~~~~~~~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~ 225 (615)
+....-.++.+....++++...+.|.+.+++++.++.||+.|+.+...+....+.- .+.+++.+.+++.|.+..|-.+
T Consensus 121 q~vVglAL~alg~i~s~EmardlapeVe~Ll~~~~~~irKKA~Lca~r~irK~P~l--~e~f~~~~~~lL~ek~hGVL~~ 198 (866)
T KOG1062|consen 121 QYVVGLALCALGNICSPEMARDLAPEVERLLQHRDPYIRKKAALCAVRFIRKVPDL--VEHFVIAFRKLLCEKHHGVLIA 198 (866)
T ss_pred eeehHHHHHHhhccCCHHHhHHhhHHHHHHHhCCCHHHHHHHHHHHHHHHHcCchH--HHHhhHHHHHHHhhcCCceeee
Confidence 33344455566666788999999999999999999999999999999998876653 5678888899999999999888
Q ss_pred HHHHHHHHHhhcChh-----hHHHhHHHHHHHhcCC-----------CChHHHHHHHHHHHHHHHHhCccchhhhHHHHH
Q psy14014 226 AVEACVSIASLLSQS-----DVEQLVMPTLRQCSGD-----------TSWRVRYMVADKFTDLQKAVGPEITKTDLVQAF 289 (615)
Q Consensus 226 a~~~l~~l~~~~~~~-----~~~~~l~~~l~~~~~d-----------~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l 289 (615)
++..+..+++.-++. .+.+.++-.+.++... +++.....+...|.-++..- ....+.+-.+|
T Consensus 199 ~l~l~~e~c~~~~~~l~~fr~l~~~lV~iLk~l~~~~yspeydv~gi~dPFLQi~iLrlLriLGq~d--~daSd~M~DiL 276 (866)
T KOG1062|consen 199 GLHLITELCKISPDALSYFRDLVPSLVKILKQLTNSGYSPEYDVHGISDPFLQIRILRLLRILGQND--ADASDLMNDIL 276 (866)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCccCCCchHHHHHHHHHHHHhcCCC--ccHHHHHHHHH
Confidence 888888888765432 1222333334333221 22333333443333333210 00111111222
Q ss_pred HHhhc-----------------------CCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHH
Q psy14014 290 QMLLK-----------------------DSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSA 346 (615)
Q Consensus 290 ~~~l~-----------------------d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~ 346 (615)
-+... ++++..|..|+..|+.|+. +.+-.+|-.
T Consensus 277 aqvatntdsskN~GnAILYE~V~TI~~I~~~~~LrvlainiLgkFL~------------------------n~d~NirYv 332 (866)
T KOG1062|consen 277 AQVATNTDSSKNAGNAILYECVRTIMDIRSNSGLRVLAINILGKFLL------------------------NRDNNIRYV 332 (866)
T ss_pred HHHHhcccccccchhHHHHHHHHHHHhccCCchHHHHHHHHHHHHhc------------------------CCccceeee
Confidence 22221 2333444444444444433 222233333
Q ss_pred HHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhh
Q psy14014 347 LASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDE 426 (615)
Q Consensus 347 ~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~ 426 (615)
++..|..+.+. .....+.--..+.++++|.+..+|..|++..-.++.......+.
T Consensus 333 aLn~L~r~V~~--d~~avqrHr~tIleCL~DpD~SIkrralELs~~lvn~~Nv~~mv----------------------- 387 (866)
T KOG1062|consen 333 ALNMLLRVVQQ--DPTAVQRHRSTILECLKDPDVSIKRRALELSYALVNESNVRVMV----------------------- 387 (866)
T ss_pred ehhhHHhhhcC--CcHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHhccccHHHHH-----------------------
Confidence 33333322221 12233444567889999999999999998877665543322222
Q ss_pred hhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhCh--HhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHH-hChH--
Q psy14014 427 KLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGV--EFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQ-FGSE-- 501 (615)
Q Consensus 427 ~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~--~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~-~~~~-- 501 (615)
..+.+++...+..+|...+..+..+++.|.+ .|+-+.++.. +.... .-||.-....+-.++.. +++.
T Consensus 388 ----~eLl~fL~~~d~~~k~~~as~I~~laEkfaP~k~W~idtml~V-l~~aG---~~V~~dv~~nll~LIa~~~~e~~~ 459 (866)
T KOG1062|consen 388 ----KELLEFLESSDEDFKADIASKIAELAEKFAPDKRWHIDTMLKV-LKTAG---DFVNDDVVNNLLRLIANAFQELHE 459 (866)
T ss_pred ----HHHHHHHHhccHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHH-HHhcc---cccchhhHHHHHHHHhcCCcchhh
Confidence 2333444444555677777777777777755 4544544432 22222 22344444444444332 2321
Q ss_pred HhhhchhHHHHh--hhcCCCchHHHHHHHHHHHHHhhh-Ch-------hhHHHhhHHHHHhhCC--CCCchHHHHHHHHH
Q psy14014 502 WAQSTVIPKVVA--MSRDQNYLHRMTCLFCINVLAEAC-GP-------TVTANFLLPTVLNMAG--DNVANVRFNVAKTL 569 (615)
Q Consensus 502 ~~~~~i~~~l~~--~~~d~~~~~R~~a~~~l~~l~~~~-~~-------~~~~~~i~~~l~~~~~--D~~~~vr~~a~~~l 569 (615)
.....+...+.. ...-.+...-+.+.||||+-+... .. ..-.+.+...+.+++. ..+..++..+..++
T Consensus 460 y~~~rLy~a~~~~~~~~is~e~l~qVa~W~IGEYGdlll~~~~~~~p~~vtesdivd~l~~v~~~~~s~~~tk~yal~Al 539 (866)
T KOG1062|consen 460 YAVLRLYLALSEDTLLDISQEPLLQVASWCIGEYGDLLLDGANEEEPIKVTESDIVDKLEKVLMSHSSDSTTKGYALTAL 539 (866)
T ss_pred HHHHHHHHHHhhhhhhhhhhhhHHHHHHHHhhhhhHHhhcCccccCCCcCCHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 111112222211 111123344677999999987432 11 1112445555655442 23478888899999
Q ss_pred HHHhHhhhhhhHHhhHHHHHhhhcCCCCccHHHHHHHH
Q psy14014 570 QKIGPILETNVIQSQVKPALDKLNGDTDVDVKYFAQEA 607 (615)
Q Consensus 570 ~~l~~~~~~~~~~~~~~~~l~~l~~d~d~~v~~~a~~a 607 (615)
-.+...+... .+.+..++..+...-|.++++.|.+-
T Consensus 540 ~KLSsr~~s~--~~ri~~lI~~~~~s~~~elQQRa~E~ 575 (866)
T KOG1062|consen 540 LKLSSRFHSS--SERIKQLISSYKSSLDTELQQRAVEY 575 (866)
T ss_pred HHHHhhcccc--HHHHHHHHHHhcccccHHHHHHHHHH
Confidence 8888766533 56678888888888888888888764
No 50
>COG1413 FOG: HEAT repeat [Energy production and conversion]
Probab=99.21 E-value=9e-09 Score=101.80 Aligned_cols=184 Identities=27% Similarity=0.342 Sum_probs=132.7
Q ss_pred HHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHH
Q psy14014 168 LRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVM 247 (615)
Q Consensus 168 l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~ 247 (615)
..+.+.+++.|+++.+|..+...++.+. ....+|.+..++.|+++.||..|..+++.+. .+..+
T Consensus 44 ~~~~~~~~l~~~~~~vr~~aa~~l~~~~--------~~~av~~l~~~l~d~~~~vr~~a~~aLg~~~--------~~~a~ 107 (335)
T COG1413 44 AADELLKLLEDEDLLVRLSAAVALGELG--------SEEAVPLLRELLSDEDPRVRDAAADALGELG--------DPEAV 107 (335)
T ss_pred hHHHHHHHHcCCCHHHHHHHHHHHhhhc--------hHHHHHHHHHHhcCCCHHHHHHHHHHHHccC--------ChhHH
Confidence 4455677888999999999999977764 3467899999999999999999999877653 33456
Q ss_pred HHHHHhcC-CCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCc------------HHHHHHHHHHHHHHHhh
Q psy14014 248 PTLRQCSG-DTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSE------------AEVRAAAANKVRDFCQN 314 (615)
Q Consensus 248 ~~l~~~~~-d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~------------~~vr~~a~~~l~~~~~~ 314 (615)
|.+..+++ |+++.||..++..|+.+... ..++.++..++|.. ..+|..++.+++.+..
T Consensus 108 ~~li~~l~~d~~~~vR~~aa~aL~~~~~~--------~a~~~l~~~l~~~~~~~a~~~~~~~~~~~r~~a~~~l~~~~~- 178 (335)
T COG1413 108 PPLVELLENDENEGVRAAAARALGKLGDE--------RALDPLLEALQDEDSGSAAAALDAALLDVRAAAAEALGELGD- 178 (335)
T ss_pred HHHHHHHHcCCcHhHHHHHHHHHHhcCch--------hhhHHHHHHhccchhhhhhhhccchHHHHHHHHHHHHHHcCC-
Confidence 66666665 89999999999999987642 33555566666654 2567777777765543
Q ss_pred ccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHh
Q psy14014 315 LDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCV 393 (615)
Q Consensus 315 ~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l 393 (615)
+...+.+...+.|....||..++.+++.+.... ..+.+.+...+.++++.||..++..++.+
T Consensus 179 -----------~~~~~~l~~~l~~~~~~vr~~Aa~aL~~~~~~~------~~~~~~l~~~~~~~~~~vr~~~~~~l~~~ 240 (335)
T COG1413 179 -----------PEAIPLLIELLEDEDADVRRAAASALGQLGSEN------VEAADLLVKALSDESLEVRKAALLALGEI 240 (335)
T ss_pred -----------hhhhHHHHHHHhCchHHHHHHHHHHHHHhhcch------hhHHHHHHHHhcCCCHHHHHHHHHHhccc
Confidence 345566777777777788888877777665422 23556677777777777777777766543
No 51
>KOG1020|consensus
Probab=99.17 E-value=4e-06 Score=91.12 Aligned_cols=500 Identities=15% Similarity=0.132 Sum_probs=266.4
Q ss_pred hHHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHH
Q psy14014 92 LPPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSH 171 (615)
Q Consensus 92 ~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~ 171 (615)
+..+...++.+...+|..|+.++..+.+.-+.-...+.+..-+.+-..|....+|.+|..++|.+...-+ +...++...
T Consensus 818 Lk~Il~~l~e~~ialRtkAlKclS~ive~Dp~vL~~~dvq~~Vh~R~~DssasVREAaldLvGrfvl~~~-e~~~qyY~~ 896 (1692)
T KOG1020|consen 818 LKLILSVLGENAIALRTKALKCLSMIVEADPSVLSRPDVQEAVHGRLNDSSASVREAALDLVGRFVLSIP-ELIFQYYDQ 896 (1692)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHhcChHhhcCHHHHHHHHHhhccchhHHHHHHHHHHhhhhhccH-HHHHHHHHH
Confidence 3344555677788999999999999988765433344444455555567778999999999997754433 333444455
Q ss_pred HHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChh------hHHH-
Q psy14014 172 FRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQS------DVEQ- 244 (615)
Q Consensus 172 l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~------~~~~- 244 (615)
+..-..|..-.||+.+++.+..+|...+.-....++.--++...+|++..|.+.+.+++..+ +..+.. ....
T Consensus 897 i~erIlDtgvsVRKRvIKIlrdic~e~pdf~~i~~~cakmlrRv~DEEg~I~kLv~etf~kl-WF~p~~~~~d~~~~~~k 975 (1692)
T KOG1020|consen 897 IIERILDTGVSVRKRVIKILRDICEETPDFSKIVDMCAKMLRRVNDEEGNIKKLVRETFLKL-WFTPVPEVNDQPAKARK 975 (1692)
T ss_pred HHhhcCCCchhHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHH-hccCCCcccccHHHHHh
Confidence 56666899999999999999999987766433445555556667899888999988888764 111110 0000
Q ss_pred --hHHHHHH---HhcCCCChHHHHHHHHHHH--HHHHHhCcc--chhhhHHHHHHHhh------------cCCcHHHHH-
Q psy14014 245 --LVMPTLR---QCSGDTSWRVRYMVADKFT--DLQKAVGPE--ITKTDLVQAFQMLL------------KDSEAEVRA- 302 (615)
Q Consensus 245 --~l~~~l~---~~~~d~~~~vR~~~~~~l~--~l~~~~~~~--~~~~~l~~~l~~~l------------~d~~~~vr~- 302 (615)
.....+. .+..+.....=....+.-. .......+- ....+.+.++..++ .+++.++|.
T Consensus 976 I~~~~~vv~~~~d~~~~~~eqLl~~ilk~~~~~~~~~~~~~v~~~~v~~~~~L~~~cl~~~i~ev~~~~~~~~~~~~~~~ 1055 (1692)
T KOG1020|consen 976 ISLEVDVVMSQVDLMNDWLEQLLDHILKFYLLKTMKESVKPVALAKVTHVLNLLTHCLVEKISEVESDDMNEEESEVRLL 1055 (1692)
T ss_pred hHHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhhhhhhHHHHhhcchHHHHHHHHHHHHHHhhhhHhhhcccchhHHH
Confidence 0111111 1112221111111110000 000000000 00112233333222 233344554
Q ss_pred HHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCC-CCHHHHHHHHHHHHhhchhhcc--hhhhhhhHHHHHHhhcCCC
Q psy14014 303 AAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVAD-PNQHVKSALASVIMGLSPILGK--HNTVDHLLPLFLSQLKDEC 379 (615)
Q Consensus 303 ~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d-~~~~vR~~~~~~l~~l~~~~g~--~~~~~~l~p~l~~~l~d~~ 379 (615)
+.+..|..|+...+.-.. ..+...+.|||..-... ...++-...+..+..+...+.. +.+...+-..+.+.+-..+
T Consensus 1056 ~~lstL~~FskirP~Llt-~khv~tL~PYL~s~~~t~~~~~fl~~vi~Ile~VlPlv~~~sesfL~sLEe~L~~~i~k~g 1134 (1692)
T KOG1020|consen 1056 AYLSTLFVFSKIRPQLLT-KKHVITLQPYLTSKASTIEEAQFLYYVIQILECVLPLVANPSESFLASLEEDLLKRIVKMG 1134 (1692)
T ss_pred HHHHHHHHHHhcCchhcc-HHHHHHhhhHHhccccchHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHhcc
Confidence 445556667665443221 13456677887654221 2234444444444444433321 2233333334444443334
Q ss_pred hhHHHHHHHhhhHhhhhhchh-HHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcC----CchHHHHHHHHhHH
Q psy14014 380 PEVRLNIISNLDCVNEVIGIQ-QWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDS----KWRVRLAIIEYMPL 454 (615)
Q Consensus 380 ~~vr~~a~~~l~~l~~~~~~~-~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~----~~~vr~~~~~~l~~ 454 (615)
-.+...|..+++.+....... .....+ ...+.. .+ +.+.....+. +...-...+..++.
T Consensus 1135 ~a~V~~~vsCl~sl~~k~~~~~~~v~~c-----f~~~~k---------~l--e~~k~s~~en~~~~~~p~l~RsiftlG~ 1198 (1692)
T KOG1020|consen 1135 MATVVEAVSCLGSLATKRTDGAKVVKAC-----FSCYLK---------LL--EVIKSSNNENADIVNFPKLQRSIFTLGL 1198 (1692)
T ss_pred hHHHHHHHHHHHHHHhhhccchHHHHHH-----HHHHHH---------HH--HHHHhccccccchhhhHHHHHHHHHHHH
Confidence 444555666666665432111 000000 100000 00 1111110011 22233345566666
Q ss_pred HHhhh--------ChH------hHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCC-C
Q psy14014 455 LAGQL--------GVE------FFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQ-N 519 (615)
Q Consensus 455 l~~~~--------~~~------~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~-~ 519 (615)
++..+ |+. ...+.++-.++-+..+.+..+|..|+..||.++-.-..-+..+.+...+...+.+. +
T Consensus 1199 l~Ryfdf~~~~~~g~~~~~~~~~~~e~v~~lL~~f~k~~~~~lR~~al~~Lg~~ci~hp~l~~~~~v~nly~~ila~~n~ 1278 (1692)
T KOG1020|consen 1199 LSRYFDFPKPSNDGKTFLQEGETLKEKVLILLMYFSKDKDGELRRKALINLGFICIQHPSLFTSREVLNLYDEILADDNS 1278 (1692)
T ss_pred HHHhccCCCccCCCccchhhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhCchhhhhHHHHHHHHHHHhhhcc
Confidence 66643 222 34466666667777888899999999999999876443333445555555555544 3
Q ss_pred chH-HHHHHHHHHHHHhh------------------------------hChh----hHHHhhHHHHHhhCCCCCchHHHH
Q psy14014 520 YLH-RMTCLFCINVLAEA------------------------------CGPT----VTANFLLPTVLNMAGDNVANVRFN 564 (615)
Q Consensus 520 ~~~-R~~a~~~l~~l~~~------------------------------~~~~----~~~~~i~~~l~~~~~D~~~~vr~~ 564 (615)
+.. +.-+...+...... .+.. .+.+..++.+...+=|.|..+|..
T Consensus 1279 ~~~~ki~~l~n~~~yL~eee~~l~~~~~~w~~~~k~edlkem~~v~sg~~s~~~~~~i~Qlfl~~ILe~cl~~d~~~r~~ 1358 (1692)
T KOG1020|consen 1279 DIKSKIQLLQNLELYLLEEEKKLRNKGKNWTKSNKSEDLKEMLDVSSGMGSSDGVSAIMQLFLDNILESCLDRDLQVRLV 1358 (1692)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhcccccccccccchHHHHHHHHHHHHHHHhccchHHHHH
Confidence 333 33333333322210 0000 123456677777778899999999
Q ss_pred HHHHHHHHhHhh-hhhhHHhhHHHHHhhhcCCCCccHHHHHHHHHHHHhh
Q psy14014 565 VAKTLQKIGPIL-ETNVIQSQVKPALDKLNGDTDVDVKYFAQEAISSIAD 613 (615)
Q Consensus 565 a~~~l~~l~~~~-~~~~~~~~~~~~l~~l~~d~d~~v~~~a~~a~~~~~~ 613 (615)
|.+.+.-+..+- -++ ....|.+..|-+|+.+..|..|-.-+..+.+
T Consensus 1359 aikvl~liL~QGLVhP---~~cvPtLIAL~Tdp~~~~r~~Ad~LL~eid~ 1405 (1692)
T KOG1020|consen 1359 AIKVLKLILNQGLVHP---VHCVPTLIALETDPSQAIRHVADELLKEIDE 1405 (1692)
T ss_pred HHHHHHHHHHccCCCc---cchhhhheeecCChHHHHHHHHHHHHHHHHH
Confidence 999998877531 111 2356777778899999999999888877653
No 52
>KOG1061|consensus
Probab=99.16 E-value=1.3e-08 Score=103.17 Aligned_cols=368 Identities=15% Similarity=0.163 Sum_probs=228.2
Q ss_pred CCCCCCcchHHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcHH-HHHHHHHHhccccCCCCC
Q psy14014 6 SAPDDSLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDEDE-VLLALAEQLGTFTPNVGG 84 (615)
Q Consensus 6 ~~~~~~~~~i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~~-vr~~a~~~l~~l~~~~~~ 84 (615)
+.+|.++..++.++...+++++.+|-.|++..+.+. -++..+.+..-+...++|.++ ||+.++.+..++-..-.+
T Consensus 79 ~~P~~a~~avnt~~kD~~d~np~iR~lAlrtm~~l~----v~~i~ey~~~Pl~~~l~d~~~yvRktaa~~vakl~~~~~~ 154 (734)
T KOG1061|consen 79 GKPDLAILAVNTFLKDCEDPNPLIRALALRTMGCLR----VDKITEYLCDPLLKCLKDDDPYVRKTAAVCVAKLFDIDPD 154 (734)
T ss_pred cCchHHHhhhhhhhccCCCCCHHHHHHHhhceeeEe----ehHHHHHHHHHHHHhccCCChhHHHHHHHHHHHhhcCChh
Confidence 567888889999999999999999999999988773 233555555555677788776 999999999887764333
Q ss_pred cchhhhchHHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChh-
Q psy14014 85 PEYVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAG- 163 (615)
Q Consensus 85 ~~~~~~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~- 163 (615)
-.+...+++.|..++.|+++.|-..|+.++..+.+.-+.........+++..+...-+.-.-..-+.++..+..+.+..
T Consensus 155 ~~~~~gl~~~L~~ll~D~~p~VVAnAlaaL~eI~e~~~~~~~~~l~~~~~~~lL~al~ec~EW~qi~IL~~l~~y~p~d~ 234 (734)
T KOG1061|consen 155 LVEDSGLVDALKDLLSDSNPMVVANALAALSEIHESHPSVNLLELNPQLINKLLEALNECTEWGQIFILDCLAEYVPKDS 234 (734)
T ss_pred hccccchhHHHHHHhcCCCchHHHHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHhhhhhHHHHHHHHHhcCCCCc
Confidence 3445678899999999999999999999999998876532211111122222111111111112223333333344322
Q ss_pred -hHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhch--hhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcCh-
Q psy14014 164 -VKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEV--DYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQ- 239 (615)
Q Consensus 164 -~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~--~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~- 239 (615)
....+++.+...+++.+..|--.+.+.+....+.... +.....+-|.+..++..+. ++...++..+.-+....+.
T Consensus 235 ~ea~~i~~r~~p~Lqh~n~avvlsavKv~l~~~~~~~~~~~~~~~K~~~pl~tlls~~~-e~qyvaLrNi~lil~~~p~~ 313 (734)
T KOG1061|consen 235 REAEDICERLTPRLQHANSAVVLSAVKVILQLVKYLKQVNELLFKKVAPPLVTLLSSES-EIQYVALRNINLILQKRPEI 313 (734)
T ss_pred hhHHHHHHHhhhhhccCCcceEeehHHHHHHHHHHHHHHHHHHHHHhcccceeeecccc-hhhHHHHhhHHHHHHhChHH
Confidence 2234555555555666666655556655555554433 1222233333333333222 4554444444443333221
Q ss_pred -------------------------------hhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHH
Q psy14014 240 -------------------------------SDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQA 288 (615)
Q Consensus 240 -------------------------------~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~ 288 (615)
+.....++.-+.+...+-+...-+.++.++|.++...... +..++.
T Consensus 314 ~~~~~~~Ff~kynDPiYvK~eKleil~~la~~~nl~qvl~El~eYatevD~~fvrkaIraig~~aik~e~~---~~cv~~ 390 (734)
T KOG1061|consen 314 LKVEIKVFFCKYNDPIYVKLEKLEILIELANDANLAQVLAELKEYATEVDVDFVRKAVRAIGRLAIKAEQS---NDCVSI 390 (734)
T ss_pred HHhHhHeeeeecCCchhhHHHHHHHHHHHhhHhHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhhhhhhhhh---hhhHHH
Confidence 1112234555566667777777777888888888765543 578888
Q ss_pred HHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCC-CCHHHHHHHHHHHHhhchhhcchhhhhhh
Q psy14014 289 FQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVAD-PNQHVKSALASVIMGLSPILGKHNTVDHL 367 (615)
Q Consensus 289 l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d-~~~~vR~~~~~~l~~l~~~~g~~~~~~~l 367 (615)
|+.+++-...-|.+.++..+..+....++. .+.+.+.+...+.. .++..|.+.+|.+++-++.+... .++
T Consensus 391 lLell~~~~~yvvqE~~vvi~dilRkyP~~------~~~vv~~l~~~~~sl~epeak~amiWilg~y~~~i~~a---~el 461 (734)
T KOG1061|consen 391 LLELLETKVDYVVQEAIVVIRDILRKYPNK------YESVVAILCENLDSLQEPEAKAALIWILGEYAERIENA---LEL 461 (734)
T ss_pred HHHHHhhcccceeeehhHHHHhhhhcCCCc------hhhhhhhhcccccccCChHHHHHHHHHHhhhhhccCcH---HHH
Confidence 888887666666677777777777766653 24455555444332 46788999999999887766542 356
Q ss_pred HHHHHHhhcCCChhHHHHHHHhh
Q psy14014 368 LPLFLSQLKDECPEVRLNIISNL 390 (615)
Q Consensus 368 ~p~l~~~l~d~~~~vr~~a~~~l 390 (615)
+..|.+-..|+...|+...+.+.
T Consensus 462 L~~f~en~~dE~~~Vql~LLta~ 484 (734)
T KOG1061|consen 462 LESFLENFKDETAEVQLELLTAA 484 (734)
T ss_pred HHHHHhhcccchHHHHHHHHHHH
Confidence 77777778887778877665543
No 53
>COG1413 FOG: HEAT repeat [Energy production and conversion]
Probab=99.16 E-value=2e-08 Score=99.31 Aligned_cols=277 Identities=23% Similarity=0.252 Sum_probs=185.3
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHH
Q psy14014 246 VMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIM 325 (615)
Q Consensus 246 l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~ 325 (615)
..+.+.+.+.|+++.+|..++..++.+.. ...+|.+...+.|.++.||..|+.+++.+..
T Consensus 44 ~~~~~~~~l~~~~~~vr~~aa~~l~~~~~--------~~av~~l~~~l~d~~~~vr~~a~~aLg~~~~------------ 103 (335)
T COG1413 44 AADELLKLLEDEDLLVRLSAAVALGELGS--------EEAVPLLRELLSDEDPRVRDAAADALGELGD------------ 103 (335)
T ss_pred hHHHHHHHHcCCCHHHHHHHHHHHhhhch--------HHHHHHHHHHhcCCCHHHHHHHHHHHHccCC------------
Confidence 45566667777788888888877666542 4677888888888888888888887776543
Q ss_pred HhhHHHHHHhhC-CCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCCh------------hHHHHHHHhhhH
Q psy14014 326 TYILPYVKDLVA-DPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECP------------EVRLNIISNLDC 392 (615)
Q Consensus 326 ~~l~p~l~~~~~-d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~------------~vr~~a~~~l~~ 392 (615)
+...|.+.+.+. |+++.||..++.+|+.+... ..++.+...++++.. .+|..++..++.
T Consensus 104 ~~a~~~li~~l~~d~~~~vR~~aa~aL~~~~~~--------~a~~~l~~~l~~~~~~~a~~~~~~~~~~~r~~a~~~l~~ 175 (335)
T COG1413 104 PEAVPPLVELLENDENEGVRAAAARALGKLGDE--------RALDPLLEALQDEDSGSAAAALDAALLDVRAAAAEALGE 175 (335)
T ss_pred hhHHHHHHHHHHcCCcHhHHHHHHHHHHhcCch--------hhhHHHHHHhccchhhhhhhhccchHHHHHHHHHHHHHH
Confidence 334455555555 78888888888888766432 113445555555432 345555554443
Q ss_pred hhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHH
Q psy14014 393 VNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALC 472 (615)
Q Consensus 393 l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l 472 (615)
+..... . +.+...+.+....+|..+...++.+.... ..+.+.+
T Consensus 176 ~~~~~~-------------~------------------~~l~~~l~~~~~~vr~~Aa~aL~~~~~~~------~~~~~~l 218 (335)
T COG1413 176 LGDPEA-------------I------------------PLLIELLEDEDADVRRAAASALGQLGSEN------VEAADLL 218 (335)
T ss_pred cCChhh-------------h------------------HHHHHHHhCchHHHHHHHHHHHHHhhcch------hhHHHHH
Confidence 311000 1 45667778888899999999998886422 2466778
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHh
Q psy14014 473 MTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLN 552 (615)
Q Consensus 473 ~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~ 552 (615)
...+.|+++.+|..++..++.+.. ....+.+...+.+.++.+|..+..+.+..- .....+.+..
T Consensus 219 ~~~~~~~~~~vr~~~~~~l~~~~~--------~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~ 282 (335)
T COG1413 219 VKALSDESLEVRKAALLALGEIGD--------EEAVDALAKALEDEDVILALLAAAALGALD--------LAEAALPLLL 282 (335)
T ss_pred HHHhcCCCHHHHHHHHHHhcccCc--------chhHHHHHHHHhccchHHHHHHHHHhcccC--------chhhHHHHHH
Confidence 888999999999999998877632 245677788888888888887777766211 1223445666
Q ss_pred hCCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHHHHhhhcCCCCccHHHHHHHHHHHH
Q psy14014 553 MAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKLNGDTDVDVKYFAQEAISSI 611 (615)
Q Consensus 553 ~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~l~~d~d~~v~~~a~~a~~~~ 611 (615)
.+.|....+|..+..++..+.... ..........+.+..++..+..+...+
T Consensus 283 ~~~~~~~~~~~~~~~~l~~~~~~~--------~~~a~~~~~~~~~~~~~~~~~~~~~~~ 333 (335)
T COG1413 283 LLIDEANAVRLEAALALGQIGQEK--------AVAALLLALEDGDADVRKAALILLEGI 333 (335)
T ss_pred HhhcchhhHHHHHHHHHHhhcccc--------hHHHHHHHhcCCchhhHHHHHHHHHhh
Confidence 778889999999999998876432 233333445777788888777766544
No 54
>COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion]
Probab=99.16 E-value=8.6e-07 Score=86.65 Aligned_cols=293 Identities=14% Similarity=0.124 Sum_probs=180.5
Q ss_pred HHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHh-CccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccch
Q psy14014 242 VEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAV-GPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQ 320 (615)
Q Consensus 242 ~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~-~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~ 320 (615)
....+.|.+...++|.-.-|-..++..+..++.-. +++ ..+..+..+..+++.+....|-+|++.|.+++...|..
T Consensus 261 ~~~q~rpfL~~wls~k~emV~lE~Ar~v~~~~~~nv~~~-~~~~~vs~L~~fL~s~rv~~rFsA~Riln~lam~~P~k-- 337 (898)
T COG5240 261 ALLQLRPFLNSWLSDKFEMVFLEAARAVCALSEENVGSQ-FVDQTVSSLRTFLKSTRVVLRFSAMRILNQLAMKYPQK-- 337 (898)
T ss_pred HHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHHhccCHH-HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhhCCce--
Confidence 34557788888888877777777888777776433 433 24567777888899999999999999999988765432
Q ss_pred hHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchh
Q psy14014 321 ENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQ 400 (615)
Q Consensus 321 ~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~ 400 (615)
....-+-+..+++|.+..+-.-|+-.| .+ .|.+...+.++..+..++.|-++..+.-++.++..+...++.+
T Consensus 338 ----v~vcN~evEsLIsd~Nr~IstyAITtL---LK-TGt~e~idrLv~~I~sfvhD~SD~FKiI~ida~rsLsl~Fp~k 409 (898)
T COG5240 338 ----VSVCNKEVESLISDENRTISTYAITTL---LK-TGTEETIDRLVNLIPSFVHDMSDGFKIIAIDALRSLSLLFPSK 409 (898)
T ss_pred ----eeecChhHHHHhhcccccchHHHHHHH---HH-cCchhhHHHHHHHHHHHHHhhccCceEEeHHHHHHHHhhCcHH
Confidence 122334566677887765544443333 22 2545555556655656655544444444444444444444422
Q ss_pred HHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcc
Q psy14014 401 QWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHV 480 (615)
Q Consensus 401 ~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~ 480 (615)
|... +.++ ...+++...+..+..+++++..+.+..+. ..+..+..+-.++.|-.
T Consensus 410 -~~s~---l~FL--------------------~~~L~~eGg~eFK~~~Vdaisd~~~~~p~--skEraLe~LC~fIEDce 463 (898)
T COG5240 410 -KLSY---LDFL--------------------GSSLLQEGGLEFKKYMVDAISDAMENDPD--SKERALEVLCTFIEDCE 463 (898)
T ss_pred -HHHH---HHHH--------------------HHHHHhcccchHHHHHHHHHHHHHhhCch--HHHHHHHHHHHHHhhcc
Confidence 2211 1111 11223345666777777777777654432 12333444444555543
Q ss_pred hHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCch
Q psy14014 481 YAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVAN 560 (615)
Q Consensus 481 ~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~ 560 (615)
+. +-++..++.+.+.-.........+.++.+-+-=.|.-+|.+|+.|+..++-........+-+...+.++++|.|.+
T Consensus 464 y~--~I~vrIL~iLG~EgP~a~~P~~yvrhIyNR~iLEN~ivRsaAv~aLskf~ln~~d~~~~~sv~~~lkRclnD~Dde 541 (898)
T COG5240 464 YH--QITVRILGILGREGPRAKTPGKYVRHIYNRLILENNIVRSAAVQALSKFALNISDVVSPQSVENALKRCLNDQDDE 541 (898)
T ss_pred hh--HHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHhccCccccccHHHHHHHHHHHhhcccHH
Confidence 32 3455666666554211111223445555544456778999999999999877666666677888899999999999
Q ss_pred HHHHHHHHHHHHh
Q psy14014 561 VRFNVAKTLQKIG 573 (615)
Q Consensus 561 vr~~a~~~l~~l~ 573 (615)
||..|.-++..+-
T Consensus 542 VRdrAsf~l~~~~ 554 (898)
T COG5240 542 VRDRASFLLRNMR 554 (898)
T ss_pred HHHHHHHHHHhhh
Confidence 9999999888774
No 55
>COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion]
Probab=99.15 E-value=8.4e-07 Score=86.73 Aligned_cols=279 Identities=14% Similarity=0.079 Sum_probs=181.4
Q ss_pred HHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchh--
Q psy14014 323 IIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQ-- 400 (615)
Q Consensus 323 ~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~-- 400 (615)
....++.|.|..-+.|.-..|.-.++.++..++...-...+.++.+..+..+|+......|..|++.+.++....+..
T Consensus 260 q~~~q~rpfL~~wls~k~emV~lE~Ar~v~~~~~~nv~~~~~~~~vs~L~~fL~s~rv~~rFsA~Riln~lam~~P~kv~ 339 (898)
T COG5240 260 QALLQLRPFLNSWLSDKFEMVFLEAARAVCALSEENVGSQFVDQTVSSLRTFLKSTRVVLRFSAMRILNQLAMKYPQKVS 339 (898)
T ss_pred HHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhhCCceee
Confidence 345677888888888888888888888888876654233445566777778888877888999999988876543211
Q ss_pred ----HHHHHH-----HHHh-hhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHH
Q psy14014 401 ----QWRVRL-----AIIE-YMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNA 470 (615)
Q Consensus 401 ----~~~~~~-----~i~~-~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~ 470 (615)
...... .|.. .+-.+.. .|-+.-.+.|. ..|..+.+|-....+.-+++++..++-.++.++ ..++.
T Consensus 340 vcN~evEsLIsd~Nr~IstyAITtLLK-TGt~e~idrLv-~~I~sfvhD~SD~FKiI~ida~rsLsl~Fp~k~--~s~l~ 415 (898)
T COG5240 340 VCNKEVESLISDENRTISTYAITTLLK-TGTEETIDRLV-NLIPSFVHDMSDGFKIIAIDALRSLSLLFPSKK--LSYLD 415 (898)
T ss_pred ecChhHHHHhhcccccchHHHHHHHHH-cCchhhHHHHH-HHHHHHHHhhccCceEEeHHHHHHHHhhCcHHH--HHHHH
Confidence 000000 0000 0111111 12111112222 345566666555566678888888887777654 23444
Q ss_pred HHHHh-cCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhCh----hhHHHh
Q psy14014 471 LCMTW-LVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGP----TVTANF 545 (615)
Q Consensus 471 ~l~~~-l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~----~~~~~~ 545 (615)
.+... ++....+.+.+++.++..+.+.... ..+..+..|-.+.+|..+. +.+++.++.+++..+. ..+..+
T Consensus 416 FL~~~L~~eGg~eFK~~~Vdaisd~~~~~p~--skEraLe~LC~fIEDcey~--~I~vrIL~iLG~EgP~a~~P~~yvrh 491 (898)
T COG5240 416 FLGSSLLQEGGLEFKKYMVDAISDAMENDPD--SKERALEVLCTFIEDCEYH--QITVRILGILGREGPRAKTPGKYVRH 491 (898)
T ss_pred HHHHHHHhcccchHHHHHHHHHHHHHhhCch--HHHHHHHHHHHHHhhcchh--HHHHHHHHHhcccCCCCCCcchHHHH
Confidence 44443 3455788999999999888876543 2355777777888887763 4466667777654332 222222
Q ss_pred hHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHHHHhhhcCCCCccHHHHHHHHHHHHhh
Q psy14014 546 LLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKLNGDTDVDVKYFAQEAISSIAD 613 (615)
Q Consensus 546 i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~l~~d~d~~v~~~a~~a~~~~~~ 613 (615)
+.. ++ -=.+.-||.+|..+|..+.-...+....+.+..++++-++|+|.+||..|..+++.+..
T Consensus 492 IyN---R~-iLEN~ivRsaAv~aLskf~ln~~d~~~~~sv~~~lkRclnD~DdeVRdrAsf~l~~~~~ 555 (898)
T COG5240 492 IYN---RL-ILENNIVRSAAVQALSKFALNISDVVSPQSVENALKRCLNDQDDEVRDRASFLLRNMRL 555 (898)
T ss_pred HHH---HH-HHhhhHHHHHHHHHHHHhccCccccccHHHHHHHHHHHhhcccHHHHHHHHHHHHhhhh
Confidence 222 22 22367899999999999887666677788999999999999999999999999987753
No 56
>KOG1991|consensus
Probab=99.15 E-value=1.2e-05 Score=84.10 Aligned_cols=512 Identities=14% Similarity=0.124 Sum_probs=259.8
Q ss_pred cchhhhhhhcCCcHHHHHHHHHHhccccCCCCCcchhhhchHHHhhhhcCc-hhHHHHHHHHHHHHHH-hhcChhHHhhh
Q psy14014 52 ELIPFLTETIYDEDEVLLALAEQLGTFTPNVGGPEYVHCLLPPLESLATVE-ETVVRDKAVESLRLIS-AQHSPHDLEAH 129 (615)
Q Consensus 52 ~ll~~l~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~l~~~~-~~~vr~~a~~~l~~l~-~~~~~~~~~~~ 129 (615)
.++..+.+.+..+..+|++|-..|..+-+. +.++..++.++ .+|+ +-.||++|+--+++.. +.++... .+
T Consensus 5 ~l~~~~~~T~d~d~~~R~~AE~~L~q~~K~---pgFv~~lLqIi---~~d~~~l~vrqaaaIYlKN~I~~~W~~~~-~~- 76 (1010)
T KOG1991|consen 5 SLLQIFRATIDSDAKERKAAEQQLNQLEKQ---PGFVSSLLQII---MDDGVPLPVRQAAAIYLKNKITKSWSSHE-AP- 76 (1010)
T ss_pred HHHHHHHHhcCCChHHHHHHHHHHHHhhcC---CcHHHHHHHHH---HccCCchhHHHHHHHHHHHHHHhcCCccC-CC-
Confidence 455555566655555888888777765542 33444443333 2343 3467888876666533 2232210 00
Q ss_pred HHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHH
Q psy14014 130 FVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIP 209 (615)
Q Consensus 130 ~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~ 209 (615)
+ .-....++.+..+.+.+...+-....-+|-....++..+.+.-.+ ..|..+++
T Consensus 77 ---------------------g----~~~~I~e~dk~~irenIl~~iv~~p~~iRvql~~~l~~Ii~~D~p-~~Wp~l~d 130 (1010)
T KOG1991|consen 77 ---------------------G----RPFGIPEEDKAVIRENILETIVQVPELIRVQLTACLNTIIKADYP-EQWPGLLD 130 (1010)
T ss_pred ---------------------C----CcCCCChHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhcCCc-ccchhHHH
Confidence 0 011223344444444444444444566777777777666655444 34788888
Q ss_pred HHHHhhccCchhHHHHHHHHHHHHHhhcC-h------------hhHHHhHHHHHHHhcCCCChH---HHHHHHHHHHHHH
Q psy14014 210 MFVNLAQDEQDSVRLLAVEACVSIASLLS-Q------------SDVEQLVMPTLRQCSGDTSWR---VRYMVADKFTDLQ 273 (615)
Q Consensus 210 ~l~~~~~d~~~~vr~~a~~~l~~l~~~~~-~------------~~~~~~l~~~l~~~~~d~~~~---vR~~~~~~l~~l~ 273 (615)
....+++.++...-..|+-++..+++.-. + +...|.+......++.+++.+ ..+..++.+-.++
T Consensus 131 ~i~~~Lqs~~~~~vy~aLl~l~qL~k~ye~k~~eeR~~l~~~v~~~fP~il~~~~~ll~~~s~~s~el~klIlKifks~~ 210 (1010)
T KOG1991|consen 131 KIKNLLQSQDANHVYGALLCLYQLFKTYEWKKDEERQPLGEAVEELFPDILQIFNGLLSQESYQSVELQKLILKIFKSLI 210 (1010)
T ss_pred HHHHHhcCcchhhHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHH
Confidence 88888888887777788888887776543 0 122334444455566666544 3333344333332
Q ss_pred H-HhCccchhh----hHHHHHHHhhc-----------------CCcHHHHHHHHHHHHHHHhhccccch--------hHH
Q psy14014 274 K-AVGPEITKT----DLVQAFQMLLK-----------------DSEAEVRAAAANKVRDFCQNLDAYNQ--------ENI 323 (615)
Q Consensus 274 ~-~~~~~~~~~----~l~~~l~~~l~-----------------d~~~~vr~~a~~~l~~~~~~~~~~~~--------~~~ 323 (615)
. .++...... ..+..+...++ +.-+.+++.|+..+.++.+..+.... .+.
T Consensus 211 ~~~LP~~L~~~~~f~~W~~l~l~i~~rpvP~E~l~~d~e~R~~~~wwK~KKWa~~~L~Rlf~Ryg~~~~~~~~y~~Fa~~ 290 (1010)
T KOG1991|consen 211 YYELPLELSAPETFTSWMELFLSILNRPVPVEVLSLDPEDRSSWPWWKCKKWALHILNRLFERYGSPSLVVPEYKEFAQM 290 (1010)
T ss_pred HHhCCHHhhCchhHHHHHHHHHHHHcCCCChhcccCChhhcccccchhhHHHHHHHHHHHHHHhCCccccchhhHHHHHH
Confidence 2 122222212 12223333332 12234788999999998887654321 112
Q ss_pred HHHhhHHHHH----HhhC---CCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhh----------cCC--------
Q psy14014 324 IMTYILPYVK----DLVA---DPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQL----------KDE-------- 378 (615)
Q Consensus 324 ~~~~l~p~l~----~~~~---d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l----------~d~-------- 378 (615)
+...+.+.+. +.++ ..-|--=+...-++..+...+....+.+.+.|++.-++ +|+
T Consensus 291 f~~n~~~~ile~~lk~l~~~~~~~yls~rvl~~~l~fl~~~Vs~~~twkll~PHl~~ii~~vIFPlmc~~d~deelwe~D 370 (1010)
T KOG1991|consen 291 FLKNFAQGILEVFLKILEQWRQQLYLSDRVLYYLLNFLEQCVSHASTWKLLKPHLQVIIQDVIFPLMCFNDEDEELWEED 370 (1010)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHhhhhhcCCCcccHHHHhcC
Confidence 2233333222 2221 11111111222233333333334444444555544322 221
Q ss_pred -ChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhh--------cCCchHHHHHH
Q psy14014 379 -CPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAE--------DSKWRVRLAII 449 (615)
Q Consensus 379 -~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~--------~~~~~vr~~~~ 449 (615)
.+-+|.+. . + ++ +..+...+...++-.++.+-|.+.|...+ +-+.+.+. ..+.+-+..++
T Consensus 371 P~EYiR~~~----D-i---~e-d~~sp~~Aa~~~l~~~~~KR~ke~l~k~l--~F~~~Il~~~~~~~~~~~~~rqkdGAL 439 (1010)
T KOG1991|consen 371 PYEYIRKKF----D-I---FE-DGYSPDTAALDFLTTLVSKRGKETLPKIL--SFIVDILTRYKEASPPNKNPRQKDGAL 439 (1010)
T ss_pred HHHHHHhcC----c-h---hc-ccCCCcHHHHHHHHHHHHhcchhhhhhHH--HHHHHHHHhhcccCCCccChhhhhhHH
Confidence 11233211 0 0 00 00001111112232333333333333322 22222222 35677888999
Q ss_pred HHhHHHHhhhCh-----HhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH-HHhChHHhhhchhHHHHhhhc-CCCchH
Q psy14014 450 EYMPLLAGQLGV-----EFFDEKLNALCMTWLVDHVYAIREAATLNLKKLV-EQFGSEWAQSTVIPKVVAMSR-DQNYLH 522 (615)
Q Consensus 450 ~~l~~l~~~~~~-----~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~-~~~~~~~~~~~i~~~l~~~~~-d~~~~~ 522 (615)
..++.++..+-+ ..+...+.+.++..++++.--+|..|+..++.++ ..++.......++....+.+. |++-.|
T Consensus 440 ~~vgsl~~~L~K~s~~~~~mE~flv~hVfP~f~s~~g~Lrarac~vl~~~~~~df~d~~~l~~ale~t~~~l~~d~~lPV 519 (1010)
T KOG1991|consen 440 RMVGSLASILLKKSPYKSQMEYFLVNHVFPEFQSPYGYLRARACWVLSQFSSIDFKDPNNLSEALELTHNCLLNDNELPV 519 (1010)
T ss_pred HHHHHHHHHHccCCchHHHHHHHHHHHhhHhhcCchhHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhccCCcCch
Confidence 999999976643 2234556788888899999999999999999998 455544344445555555554 899999
Q ss_pred HHHHHHHHHHHHhhhChh--hHHHhhHH---HHHhhCCCCCchHHHHHHHHHHHHhHhhhh------hhHHhh-HHHHHh
Q psy14014 523 RMTCLFCINVLAEACGPT--VTANFLLP---TVLNMAGDNVANVRFNVAKTLQKIGPILET------NVIQSQ-VKPALD 590 (615)
Q Consensus 523 R~~a~~~l~~l~~~~~~~--~~~~~i~~---~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~------~~~~~~-~~~~l~ 590 (615)
|..|+.|+..+....... .+.+++-| .+.++.++-+.+.-- .++..++..++. ..+-+. ....++
T Consensus 520 ~VeAalALq~fI~~~~~~~e~~~~hvp~~mq~lL~L~ne~End~Lt---~vme~iV~~fseElsPfA~eL~q~La~~F~k 596 (1010)
T KOG1991|consen 520 RVEAALALQSFISNQEQADEKVSAHVPPIMQELLKLSNEVENDDLT---NVMEKIVCKFSEELSPFAVELCQNLAETFLK 596 (1010)
T ss_pred hhHHHHHHHHHHhcchhhhhhHhhhhhHHHHHHHHHHHhcchhHHH---HHHHHHHHHHHHhhchhHHHHHHHHHHHHHH
Confidence 999999999998776533 24444444 444455554443322 333333333321 111112 222222
Q ss_pred hhc--CCCCccHHHHHHHHHHHH
Q psy14014 591 KLN--GDTDVDVKYFAQEAISSI 611 (615)
Q Consensus 591 ~l~--~d~d~~v~~~a~~a~~~~ 611 (615)
.+. .|.++.+-..+..|+|.+
T Consensus 597 ~l~~~~~~~~~~ddk~iaA~GiL 619 (1010)
T KOG1991|consen 597 VLQTSEDEDESDDDKAIAASGIL 619 (1010)
T ss_pred HHhccCCCCccchHHHHHHHHHH
Confidence 232 456666666666666543
No 57
>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ]. The domain is also found in other proteins involved in microtubule binding, including STU1, MOR1 and spindle pole body component Alp14.; PDB: 2QK2_A.
Probab=99.15 E-value=2.4e-09 Score=99.41 Aligned_cols=192 Identities=19% Similarity=0.221 Sum_probs=126.1
Q ss_pred HHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHH
Q psy14014 368 LPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLA 447 (615)
Q Consensus 368 ~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~ 447 (615)
.+.|.+.-.+.+|+.|..++..+..++........... +.+.+..+ + +.+...+.|.+..+-..
T Consensus 9 ~~~l~~~~~~~~W~~r~~al~~L~~l~~~~~~~~~~~~--~~~~l~~~------------~--~~i~~~l~d~Rs~v~~~ 72 (228)
T PF12348_consen 9 LAALEKKESESDWEERVEALQKLRSLIKGNAPEDFPPD--FVECLRQL------------L--DAIIKQLSDLRSKVSKT 72 (228)
T ss_dssp -TTHHHHHT-SSHHHHHHHHHHHHHHHHH-B-----HH--HHHHHH-----------------HHHHH-S-HH---HHHH
T ss_pred HHHHhccCCccCHHHHHHHHHHHHHHHHcCCccccHHH--HHHHHHHh------------H--HHHHHHHhhhHHHHHHH
Confidence 33343333556777777777777666543311111111 01111100 0 34556667777889999
Q ss_pred HHHHhHHHHhhhChHh--HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhch-hHHHHhhhcCCCchHHH
Q psy14014 448 IIEYMPLLAGQLGVEF--FDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTV-IPKVVAMSRDQNYLHRM 524 (615)
Q Consensus 448 ~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i-~~~l~~~~~d~~~~~R~ 524 (615)
++..+..++..+|..+ +.+.++|.+++.+.|++..+|..|..++..++..++. ...+ .+.+....+++++.+|.
T Consensus 73 A~~~l~~l~~~l~~~~~~~~~~~l~~Ll~~~~~~~~~i~~~a~~~L~~i~~~~~~---~~~~~~~~l~~~~~~Kn~~vR~ 149 (228)
T PF12348_consen 73 ACQLLSDLARQLGSHFEPYADILLPPLLKKLGDSKKFIREAANNALDAIIESCSY---SPKILLEILSQGLKSKNPQVRE 149 (228)
T ss_dssp HHHHHHHHHHHHGGGGHHHHHHHHHHHHHGGG---HHHHHHHHHHHHHHHTTS-H-----HHHHHHHHHHTT-S-HHHHH
T ss_pred HHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHCCc---HHHHHHHHHHHHHhCCCHHHHH
Confidence 9999999999998864 5578999999999999999999999999999998771 1234 67788889999999999
Q ss_pred HHHHHHHHHHhhhC--hhh-----HHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhh
Q psy14014 525 TCLFCINVLAEACG--PTV-----TANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILET 578 (615)
Q Consensus 525 ~a~~~l~~l~~~~~--~~~-----~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~ 578 (615)
.++.++..+....+ ... ..+.+.+.+.+++.|++++||..+-.++..+.+.++.
T Consensus 150 ~~~~~l~~~l~~~~~~~~~l~~~~~~~~l~~~l~~~l~D~~~~VR~~Ar~~~~~l~~~~~~ 210 (228)
T PF12348_consen 150 ECAEWLAIILEKWGSDSSVLQKSAFLKQLVKALVKLLSDADPEVREAARECLWALYSHFPE 210 (228)
T ss_dssp HHHHHHHHHHTT-----GGG--HHHHHHHHHHHHHHHTSS-HHHHHHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHccchHhhhcccchHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCH
Confidence 99999999988877 222 2356889999999999999999999999999887763
No 58
>KOG1059|consensus
Probab=99.11 E-value=1.6e-06 Score=87.23 Aligned_cols=219 Identities=16% Similarity=0.163 Sum_probs=146.3
Q ss_pred ChhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChh
Q psy14014 161 TAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQS 240 (615)
Q Consensus 161 ~~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~ 240 (615)
.+..-..+-+-+..++.+.-+.+|+.|+..+-.+.-..+.. ...-+|-+.+-+.|+++.|..+|+..+-.+++.-|..
T Consensus 138 TpdLARDLa~Dv~tLL~sskpYvRKkAIl~lykvFLkYPeA--lr~~FprL~EkLeDpDp~V~SAAV~VICELArKnPkn 215 (877)
T KOG1059|consen 138 TPDLARDLADDVFTLLNSSKPYVRKKAILLLYKVFLKYPEA--LRPCFPRLVEKLEDPDPSVVSAAVSVICELARKNPQN 215 (877)
T ss_pred CchhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhhHh--HhhhHHHHHHhccCCCchHHHHHHHHHHHHHhhCCcc
Confidence 44555566666777889999999999999888887666543 3456788888899999999999999999999887764
Q ss_pred hHHHhHHHHHHHhcC--CCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhh----
Q psy14014 241 DVEQLVMPTLRQCSG--DTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQN---- 314 (615)
Q Consensus 241 ~~~~~l~~~l~~~~~--d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~---- 314 (615)
- -.+-|.+.+++. +.+| +-...++.|+.+...=+. ....++|.+..++..+. |...+-+.+..
T Consensus 216 y--L~LAP~ffkllttSsNNW-mLIKiiKLF~aLtplEPR--LgKKLieplt~li~sT~------AmSLlYECvNTVVa~ 284 (877)
T KOG1059|consen 216 Y--LQLAPLFYKLLVTSSNNW-VLIKLLKLFAALTPLEPR--LGKKLIEPITELMESTV------AMSLLYECVNTVVAV 284 (877)
T ss_pred c--ccccHHHHHHHhccCCCe-ehHHHHHHHhhccccCch--hhhhhhhHHHHHHHhhH------HHHHHHHHHHHheee
Confidence 2 125566666654 3456 444556666666543111 12367777777765443 22222222221
Q ss_pred -cccc-chhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhH
Q psy14014 315 -LDAY-NQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDC 392 (615)
Q Consensus 315 -~~~~-~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~ 392 (615)
+... ..+.......+.-|..++.|.++..|--.+.+++.++..-. ..++.-...++++|.|.++.+|..|+..+..
T Consensus 285 s~s~g~~d~~asiqLCvqKLr~fiedsDqNLKYlgLlam~KI~ktHp--~~Vqa~kdlIlrcL~DkD~SIRlrALdLl~g 362 (877)
T KOG1059|consen 285 SMSSGMSDHSASIQLCVQKLRIFIEDSDQNLKYLGLLAMSKILKTHP--KAVQAHKDLILRCLDDKDESIRLRALDLLYG 362 (877)
T ss_pred hhccCCCCcHHHHHHHHHHHhhhhhcCCccHHHHHHHHHHHHhhhCH--HHHHHhHHHHHHHhccCCchhHHHHHHHHHH
Confidence 1111 12223345556666778899999999988888888765422 2233446678999999999999999988765
Q ss_pred hh
Q psy14014 393 VN 394 (615)
Q Consensus 393 l~ 394 (615)
++
T Consensus 363 mV 364 (877)
T KOG1059|consen 363 MV 364 (877)
T ss_pred Hh
Confidence 54
No 59
>TIGR02270 conserved hypothetical protein. Members are found in Myxococcus xanthus (six members), Geobacter sulfurreducens, and Pseudomonas aeruginosa; a short protein homologous to the N-terminal region is found in Mesorhizobium loti. All sequence are from Proteobacteria. The function is unknown.
Probab=99.11 E-value=1.9e-08 Score=99.34 Aligned_cols=144 Identities=17% Similarity=0.045 Sum_probs=67.2
Q ss_pred HHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHH
Q psy14014 433 IVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVV 512 (615)
Q Consensus 433 i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~ 512 (615)
+...++|+++.||..++.+++.+.. ....|.+...+.|.+..||.+|+.+++.+ |.. ...+.+.
T Consensus 152 L~~~L~d~d~~Vra~A~raLG~l~~--------~~a~~~L~~al~d~~~~VR~aA~~al~~l----G~~----~A~~~l~ 215 (410)
T TIGR02270 152 LEAALTHEDALVRAAALRALGELPR--------RLSESTLRLYLRDSDPEVRFAALEAGLLA----GSR----LAWGVCR 215 (410)
T ss_pred HHHHhcCCCHHHHHHHHHHHHhhcc--------ccchHHHHHHHcCCCHHHHHHHHHHHHHc----CCH----hHHHHHH
Confidence 3344555666666666666655532 12333344556666666666666665444 211 2233444
Q ss_pred hhhcCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHHHHhhh
Q psy14014 513 AMSRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKL 592 (615)
Q Consensus 513 ~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~l 592 (615)
.+..++....+..+...++.. +. +..++.|..++.|+. ||..++.+++.+.. +...+.+..+
T Consensus 216 ~~~~~~g~~~~~~l~~~lal~----~~----~~a~~~L~~ll~d~~--vr~~a~~AlG~lg~--------p~av~~L~~~ 277 (410)
T TIGR02270 216 RFQVLEGGPHRQRLLVLLAVA----GG----PDAQAWLRELLQAAA--TRREALRAVGLVGD--------VEAAPWCLEA 277 (410)
T ss_pred HHHhccCccHHHHHHHHHHhC----Cc----hhHHHHHHHHhcChh--hHHHHHHHHHHcCC--------cchHHHHHHH
Confidence 444444444444333333332 11 134455555555533 56666666665531 1122223333
Q ss_pred cCCCCccHHHHHHHHHHHHh
Q psy14014 593 NGDTDVDVKYFAQEAISSIA 612 (615)
Q Consensus 593 ~~d~d~~v~~~a~~a~~~~~ 612 (615)
+.|.. +++.|-+|++.|.
T Consensus 278 l~d~~--~aR~A~eA~~~It 295 (410)
T TIGR02270 278 MREPP--WARLAGEAFSLIT 295 (410)
T ss_pred hcCcH--HHHHHHHHHHHhh
Confidence 23222 6666666666554
No 60
>KOG1243|consensus
Probab=99.10 E-value=7.2e-10 Score=111.03 Aligned_cols=272 Identities=16% Similarity=0.180 Sum_probs=220.0
Q ss_pred CCCCCCCCcchHHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcH--HHHHHHHHHhccccCC
Q psy14014 4 SDSAPDDSLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDED--EVLLALAEQLGTFTPN 81 (615)
Q Consensus 4 ~~~~~~~~~~~i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~--~vr~~a~~~l~~l~~~ 81 (615)
.+|+..+-+..+..+|+.+...+...|....+.|.+....++.+.....++|.+...+.-.+ ..-....-.+++.
T Consensus 245 ~~gff~n~fvd~~~fLeel~lks~~eK~~Ff~~L~~~l~~~pe~i~~~kvlp~Ll~~~~~g~a~~~~ltpl~k~~k~--- 321 (690)
T KOG1243|consen 245 LGGFFRNDFVDTLLFLEELRLKSVEEKQKFFSGLIDRLDNFPEEIIASKVLPILLAALEFGDAASDFLTPLFKLGKD--- 321 (690)
T ss_pred ccccccchHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccccchhhhhHHHHhhhh---
Confidence 46777788888999999999999999999999999988888888788889999876544222 2222222233332
Q ss_pred CCCcchhhhchHHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCC
Q psy14014 82 VGGPEYVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVT 161 (615)
Q Consensus 82 ~~~~~~~~~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~ 161 (615)
+..++|...++|.+.++....+..+|..-++-+..+..+++++.+...+.|.
T Consensus 322 ld~~eyq~~i~p~l~kLF~~~Dr~iR~~LL~~i~~~i~~Lt~~~~~d~I~ph---------------------------- 373 (690)
T KOG1243|consen 322 LDEEEYQVRIIPVLLKLFKSPDRQIRLLLLQYIEKYIDHLTKQILNDQIFPH---------------------------- 373 (690)
T ss_pred ccccccccchhhhHHHHhcCcchHHHHHHHHhHHHHhhhcCHHhhcchhHHH----------------------------
Confidence 2345688889999999999999999999999888888888876665555444
Q ss_pred hhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhh
Q psy14014 162 AGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSD 241 (615)
Q Consensus 162 ~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~ 241 (615)
+...+.|.++-+|...+.++..++..++......+++-.|-.+..|+...+|....-+++.++.++....
T Consensus 374 ----------v~~G~~DTn~~Lre~Tlksm~~La~kL~~~~Ln~Ellr~~ar~q~d~~~~irtntticlgki~~~l~~~~ 443 (690)
T KOG1243|consen 374 ----------VALGFLDTNATLREQTLKSMAVLAPKLSKRNLNGELLRYLARLQPDEHGGIRTNTTICLGKIAPHLAASV 443 (690)
T ss_pred ----------HHhhcccCCHHHHHHHHHHHHHHHhhhchhhhcHHHHHHHHhhCccccCcccccceeeecccccccchhh
Confidence 4677789999999999999999999888887778899999888889999999999999999999887766
Q ss_pred HHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhcc
Q psy14014 242 VEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLD 316 (615)
Q Consensus 242 ~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~ 316 (615)
....+.-.+...+.|+-..-|.+....+......+.......+++|.+.-+.-|++..||..|.+++..+...+.
T Consensus 444 R~~vL~~aftralkdpf~paR~a~v~~l~at~~~~~~~~va~kIlp~l~pl~vd~e~~vr~~a~~~i~~fl~kl~ 518 (690)
T KOG1243|consen 444 RKRVLASAFTRALKDPFVPARKAGVLALAATQEYFDQSEVANKILPSLVPLTVDPEKTVRDTAEKAIRQFLEKLE 518 (690)
T ss_pred hccccchhhhhhhcCCCCCchhhhhHHHhhcccccchhhhhhhccccccccccCcccchhhHHHHHHHHHHhhhh
Confidence 555555666677889988899999988888888777766677899999999999999999999999998887654
No 61
>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ]. The domain is also found in other proteins involved in microtubule binding, including STU1, MOR1 and spindle pole body component Alp14.; PDB: 2QK2_A.
Probab=99.08 E-value=1.4e-08 Score=94.38 Aligned_cols=197 Identities=22% Similarity=0.243 Sum_probs=133.3
Q ss_pred hhchHHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHH
Q psy14014 89 HCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAEL 168 (615)
Q Consensus 89 ~~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l 168 (615)
+.+...|..--.+.+...|..++..+..++....+....+.+.+.+ ..+
T Consensus 6 ~~~~~~l~~~~~~~~W~~r~~al~~L~~l~~~~~~~~~~~~~~~~l-------------------------------~~~ 54 (228)
T PF12348_consen 6 EEILAALEKKESESDWEERVEALQKLRSLIKGNAPEDFPPDFVECL-------------------------------RQL 54 (228)
T ss_dssp GGS-TTHHHHHT-SSHHHHHHHHHHHHHHHHH-B-----HHHHHHH-------------------------------H--
T ss_pred HHHHHHHhccCCccCHHHHHHHHHHHHHHHHcCCccccHHHHHHHH-------------------------------HHh
Confidence 3445555554567788999999999998877662222222222222 122
Q ss_pred HHHHHHHhCCCChHHHHHHHHhHHHHHHHhchh--hhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhH
Q psy14014 169 RSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVD--YLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLV 246 (615)
Q Consensus 169 ~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~--~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l 246 (615)
...+...+.|....|-+.++.++..++...+.. .+...++|.+...+.|....+|..|..++..+++..+.. ...+
T Consensus 55 ~~~i~~~l~d~Rs~v~~~A~~~l~~l~~~l~~~~~~~~~~~l~~Ll~~~~~~~~~i~~~a~~~L~~i~~~~~~~--~~~~ 132 (228)
T PF12348_consen 55 LDAIIKQLSDLRSKVSKTACQLLSDLARQLGSHFEPYADILLPPLLKKLGDSKKFIREAANNALDAIIESCSYS--PKIL 132 (228)
T ss_dssp -HHHHH-S-HH---HHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHGGG---HHHHHHHHHHHHHHHTTS-H----HHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHCCcH--HHHH
Confidence 344556667777788999999999999988774 356779999999999999999999999999999988711 1224
Q ss_pred HHHHHHhcCCCChHHHHHHHHHHHHHHHHhC---ccch----hhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhcccc
Q psy14014 247 MPTLRQCSGDTSWRVRYMVADKFTDLQKAVG---PEIT----KTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAY 318 (615)
Q Consensus 247 ~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~---~~~~----~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~ 318 (615)
.+.+....++.++.+|..++..+..+....+ .... .+.+.+.+..++.|.+++||.+|-.++..+...++..
T Consensus 133 ~~~l~~~~~~Kn~~vR~~~~~~l~~~l~~~~~~~~~l~~~~~~~~l~~~l~~~l~D~~~~VR~~Ar~~~~~l~~~~~~~ 211 (228)
T PF12348_consen 133 LEILSQGLKSKNPQVREECAEWLAIILEKWGSDSSVLQKSAFLKQLVKALVKLLSDADPEVREAARECLWALYSHFPER 211 (228)
T ss_dssp HHHHHHHTT-S-HHHHHHHHHHHHHHHTT-----GGG--HHHHHHHHHHHHHHHTSS-HHHHHHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHccchHhhhcccchHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHh
Confidence 7888889999999999999999999888777 2221 2568899999999999999999999999998876643
No 62
>KOG1020|consensus
Probab=99.07 E-value=2.3e-05 Score=85.45 Aligned_cols=562 Identities=14% Similarity=0.115 Sum_probs=279.7
Q ss_pred cch-HHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcH-HHHHHHHHHhccccCCCCCcchhh
Q psy14014 12 LYP-IAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDED-EVLLALAEQLGTFTPNVGGPEYVH 89 (615)
Q Consensus 12 ~~~-i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~-~vr~~a~~~l~~l~~~~~~~~~~~ 89 (615)
+.+ ++.++..+..+-+..|..|+++|+.++..=+.--..+.+..-+..-+.|+. .||.+|...+|+++- ..++...
T Consensus 814 fD~yLk~Il~~l~e~~ialRtkAlKclS~ive~Dp~vL~~~dvq~~Vh~R~~DssasVREAaldLvGrfvl--~~~e~~~ 891 (1692)
T KOG1020|consen 814 FDPYLKLILSVLGENAIALRTKALKCLSMIVEADPSVLSRPDVQEAVHGRLNDSSASVREAALDLVGRFVL--SIPELIF 891 (1692)
T ss_pred hHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhcChHhhcCHHHHHHHHHhhccchhHHHHHHHHHHhhhhh--ccHHHHH
Confidence 444 455556677888889999999999997632221234445445555555665 599999999999874 2455666
Q ss_pred hchHHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCC-Ch------
Q psy14014 90 CLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRV-TA------ 162 (615)
Q Consensus 90 ~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~-~~------ 162 (615)
.....+..-+.|+.-.||..++..++.++..-++=.....+.-.+.+-.+|+...++..+...+-.+|=.- ++
T Consensus 892 qyY~~i~erIlDtgvsVRKRvIKIlrdic~e~pdf~~i~~~cakmlrRv~DEEg~I~kLv~etf~klWF~p~~~~~d~~~ 971 (1692)
T KOG1020|consen 892 QYYDQIIERILDTGVSVRKRVIKILRDICEETPDFSKIVDMCAKMLRRVNDEEGNIKKLVRETFLKLWFTPVPEVNDQPA 971 (1692)
T ss_pred HHHHHHHhhcCCCchhHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHhccCCCcccccHH
Confidence 66666777778999999999999999999887642222222222223333333333333333332222000 00
Q ss_pred ------------------------hh------------------------HHHHHHHHHH------------HhCCCChH
Q psy14014 163 ------------------------GV------------------------KAELRSHFRN------------LCQDDTPM 182 (615)
Q Consensus 163 ------------------------~~------------------------~~~l~~~l~~------------l~~d~~~~ 182 (615)
+. ....++++.. ...+++.+
T Consensus 972 ~~~kI~~~~~vv~~~~d~~~~~~eqLl~~ilk~~~~~~~~~~~~~v~~~~v~~~~~L~~~cl~~~i~ev~~~~~~~~~~~ 1051 (1692)
T KOG1020|consen 972 KARKISLEVDVVMSQVDLMNDWLEQLLDHILKFYLLKTMKESVKPVALAKVTHVLNLLTHCLVEKISEVESDDMNEEESE 1051 (1692)
T ss_pred HHHhhHHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhhhhhhHHHHhhcchHHHHHHHHHHHHHHhhhhHhhhcccch
Confidence 00 0001111100 00112223
Q ss_pred HHHHH-HHhHHHHHHHhchh---hhHhhhHHHHHHhhcc-CchhHHHHHHHHHHHHHhhcCh--hhHHHhHHHHHHHhcC
Q psy14014 183 VRRAA-AGKLGELAKVVEVD---YLKTDIIPMFVNLAQD-EQDSVRLLAVEACVSIASLLSQ--SDVEQLVMPTLRQCSG 255 (615)
Q Consensus 183 vR~~a-~~~l~~l~~~~~~~---~~~~~ll~~l~~~~~d-~~~~vr~~a~~~l~~l~~~~~~--~~~~~~l~~~l~~~~~ 255 (615)
+|..+ +..|..+++..+.- .+...+.|++..-+.. +...+-...+..+....+.... +.+...+-..|...+-
T Consensus 1052 ~~~~~~lstL~~FskirP~Llt~khv~tL~PYL~s~~~t~~~~~fl~~vi~Ile~VlPlv~~~sesfL~sLEe~L~~~i~ 1131 (1692)
T KOG1020|consen 1052 VRLLAYLSTLFVFSKIRPQLLTKKHVITLQPYLTSKASTIEEAQFLYYVIQILECVLPLVANPSESFLASLEEDLLKRIV 1131 (1692)
T ss_pred hHHHHHHHHHHHHHhcCchhccHHHHHHhhhHHhccccchHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHH
Confidence 33332 22333333332221 1122233333332111 1223333334444433333321 2222223333333222
Q ss_pred CCChHHHHHHHHHHHHHHHHhCccch-hhhHHHHHHHhhc-------CC----cHHHHHHHHHHHHHHHhhcccc-----
Q psy14014 256 DTSWRVRYMVADKFTDLQKAVGPEIT-KTDLVQAFQMLLK-------DS----EAEVRAAAANKVRDFCQNLDAY----- 318 (615)
Q Consensus 256 d~~~~vR~~~~~~l~~l~~~~~~~~~-~~~l~~~l~~~l~-------d~----~~~vr~~a~~~l~~~~~~~~~~----- 318 (615)
-.+...-..+.-|++.++........ ...+...+.+.+. +. +...-...+..+|.++.++.-.
T Consensus 1132 k~g~a~V~~~vsCl~sl~~k~~~~~~~v~~cf~~~~k~le~~k~s~~en~~~~~~p~l~RsiftlG~l~Ryfdf~~~~~~ 1211 (1692)
T KOG1020|consen 1132 KMGMATVVEAVSCLGSLATKRTDGAKVVKACFSCYLKLLEVIKSSNNENADIVNFPKLQRSIFTLGLLSRYFDFPKPSND 1211 (1692)
T ss_pred hcchHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHHHHhccCCCccCC
Confidence 22222333344455555554332221 1122222322221 11 1122234567777777754211
Q ss_pred c-----hhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhH--HHHHHHhhh
Q psy14014 319 N-----QENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEV--RLNIISNLD 391 (615)
Q Consensus 319 ~-----~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~v--r~~a~~~l~ 391 (615)
. ......+.++..|.-...+.+-.+|..++.+++.++-.-..-....++...+.+.+.+.+.++ +..+++.+.
T Consensus 1212 g~~~~~~~~~~~e~v~~lL~~f~k~~~~~lR~~al~~Lg~~ci~hp~l~~~~~v~nly~~ila~~n~~~~~ki~~l~n~~ 1291 (1692)
T KOG1020|consen 1212 GKTFLQEGETLKEKVLILLMYFSKDKDGELRRKALINLGFICIQHPSLFTSREVLNLYDEILADDNSDIKSKIQLLQNLE 1291 (1692)
T ss_pred CccchhhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhCchhhhhHHHHHHHHHHHhhhcccHHHHHHHHHHHH
Confidence 0 012345556666666667777899999999999887544433445567777888887755443 334443333
Q ss_pred HhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHh---hhChH----hH
Q psy14014 392 CVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAG---QLGVE----FF 464 (615)
Q Consensus 392 ~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~---~~~~~----~~ 464 (615)
.+... ++ +.+ ..++.+|.- ..-.+.+..+.. ..|.. -.
T Consensus 1292 ~yL~e---ee--~~l-----------------------------~~~~~~w~~-~~k~edlkem~~v~sg~~s~~~~~~i 1336 (1692)
T KOG1020|consen 1292 LYLLE---EE--KKL-----------------------------RNKGKNWTK-SNKSEDLKEMLDVSSGMGSSDGVSAI 1336 (1692)
T ss_pred HHHHH---HH--HHH-----------------------------Hhcccchhh-hhhHHHHHhhcccccccccccchHHH
Confidence 22110 00 000 011222211 111111111111 11111 12
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhhH--
Q psy14014 465 DEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVT-- 542 (615)
Q Consensus 465 ~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~-- 542 (615)
.+.+++.+++..-|.+..+|..|+..+..+.+. |-- ....-+|+++.+..|+....|..|-..+..+-+.+..=++
T Consensus 1337 ~Qlfl~~ILe~cl~~d~~~r~~aikvl~liL~Q-GLV-hP~~cvPtLIAL~Tdp~~~~r~~Ad~LL~eid~kY~gfv~sk 1414 (1692)
T KOG1020|consen 1337 MQLFLDNILESCLDRDLQVRLVAIKVLKLILNQ-GLV-HPVHCVPTLIALETDPSQAIRHVADELLKEIDEKYEGFVFSK 1414 (1692)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHc-cCC-CccchhhhheeecCChHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 344566667777788999999999999888764 421 1134789999999999999999999989888776432111
Q ss_pred ------HHhhH-HHHHhhCCCCCchHH--HHHHHHHH-HHhHhh-hhhhHHhhHHHHHhhhcCCCCccHHHHHHHHHHHH
Q psy14014 543 ------ANFLL-PTVLNMAGDNVANVR--FNVAKTLQ-KIGPIL-ETNVIQSQVKPALDKLNGDTDVDVKYFAQEAISSI 611 (615)
Q Consensus 543 ------~~~i~-~~l~~~~~D~~~~vr--~~a~~~l~-~l~~~~-~~~~~~~~~~~~l~~l~~d~d~~v~~~a~~a~~~~ 611 (615)
..+.+ ..+.....+++...| ..++.++. .+.+.. ++...-+.+.+-+.++..|++..+-.........+
T Consensus 1415 ~~~G~~lsf~lq~~~~~~~~~~~~~fr~~d~ss~tl~s~ly~~~r~nk~~rr~fl~si~~lfd~~~ks~vs~~~yiadnL 1494 (1692)
T KOG1020|consen 1415 LSQGVQLSFKLQQHIDEKTYKPVRGFRLPDHSSSTLKSNLYKSIRGNKQIRRSFLQSILDLFDDPNKSVVSFLLYIADNL 1494 (1692)
T ss_pred HHhhhHHHHHHHHHHHHHhhcccccccCcccchhHHHhccHHHHhhhHHHHHHHHHHHHHhccCCCcchhhhHHHHHhhh
Confidence 11111 222222335666666 23333332 222222 23445566777777776775666655555544444
Q ss_pred h
Q psy14014 612 A 612 (615)
Q Consensus 612 ~ 612 (615)
|
T Consensus 1495 A 1495 (1692)
T KOG1020|consen 1495 A 1495 (1692)
T ss_pred c
Confidence 3
No 63
>KOG1062|consensus
Probab=99.06 E-value=4.3e-06 Score=85.33 Aligned_cols=401 Identities=14% Similarity=0.124 Sum_probs=216.5
Q ss_pred HHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHH
Q psy14014 169 RSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMP 248 (615)
Q Consensus 169 ~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~ 248 (615)
.+.+.+=+++.+..|--.|+-++|.+ .++| ...++.|-+.++++..++.||+-|+.|...+....|+- .+.+++
T Consensus 109 tNslknDL~s~nq~vVglAL~alg~i---~s~E-mardlapeVe~Ll~~~~~~irKKA~Lca~r~irK~P~l--~e~f~~ 182 (866)
T KOG1062|consen 109 TNSLKNDLNSSNQYVVGLALCALGNI---CSPE-MARDLAPEVERLLQHRDPYIRKKAALCAVRFIRKVPDL--VEHFVI 182 (866)
T ss_pred HHHHHhhccCCCeeehHHHHHHhhcc---CCHH-HhHHhhHHHHHHHhCCCHHHHHHHHHHHHHHHHcCchH--HHHhhH
Confidence 34445555556655544444444444 4444 35679999999999999999999999999998887753 556777
Q ss_pred HHHHhcCCCChHHHHHHHHHHHHHHHHhCccc-hhhhHHHHHHHhhcC---------------CcHHHHHHHHHHHHHHH
Q psy14014 249 TLRQCSGDTSWRVRYMVADKFTDLQKAVGPEI-TKTDLVQAFQMLLKD---------------SEAEVRAAAANKVRDFC 312 (615)
Q Consensus 249 ~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~-~~~~l~~~l~~~l~d---------------~~~~vr~~a~~~l~~~~ 312 (615)
...+++.+.+..|-.+....+..++..-.... ....+.+-|...+++ ++|.++...++.|.-+.
T Consensus 183 ~~~~lL~ek~hGVL~~~l~l~~e~c~~~~~~l~~fr~l~~~lV~iLk~l~~~~yspeydv~gi~dPFLQi~iLrlLriLG 262 (866)
T KOG1062|consen 183 AFRKLLCEKHHGVLIAGLHLITELCKISPDALSYFRDLVPSLVKILKQLTNSGYSPEYDVHGISDPFLQIRILRLLRILG 262 (866)
T ss_pred HHHHHHhhcCCceeeeHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCccCCCchHHHHHHHHHHHHhc
Confidence 78888888888887777777766665422111 112344444443321 23444444555554444
Q ss_pred hhccccchhHHHHHhhHHHHHHhhC--CCCHHHHH-HHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHh
Q psy14014 313 QNLDAYNQENIIMTYILPYVKDLVA--DPNQHVKS-ALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISN 389 (615)
Q Consensus 313 ~~~~~~~~~~~~~~~l~p~l~~~~~--d~~~~vR~-~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~ 389 (615)
+.-... .+.+-..|.+... |.+..+=. ...+++..+...........--+..+-+++..++.++|.-++..
T Consensus 263 q~d~da------Sd~M~DiLaqvatntdsskN~GnAILYE~V~TI~~I~~~~~LrvlainiLgkFL~n~d~NirYvaLn~ 336 (866)
T KOG1062|consen 263 QNDADA------SDLMNDILAQVATNTDSSKNAGNAILYECVRTIMDIRSNSGLRVLAINILGKFLLNRDNNIRYVALNM 336 (866)
T ss_pred CCCccH------HHHHHHHHHHHHhcccccccchhHHHHHHHHHHHhccCCchHHHHHHHHHHHHhcCCccceeeeehhh
Confidence 321110 1111111111111 11111100 00111111111111111111112233344444445555555555
Q ss_pred hhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHH
Q psy14014 390 LDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLN 469 (615)
Q Consensus 390 l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~ 469 (615)
|..++..-.. ..+++- ..+.+.++|++..+|..+++..-.+...-.-.. ++
T Consensus 337 L~r~V~~d~~-avqrHr------------------------~tIleCL~DpD~SIkrralELs~~lvn~~Nv~~----mv 387 (866)
T KOG1062|consen 337 LLRVVQQDPT-AVQRHR------------------------STILECLKDPDVSIKRRALELSYALVNESNVRV----MV 387 (866)
T ss_pred HHhhhcCCcH-HHHHHH------------------------HHHHHHhcCCcHHHHHHHHHHHHHHhccccHHH----HH
Confidence 4444332221 111111 467788899999999999999888866444333 44
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhh-Chhh---HHHh
Q psy14014 470 ALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEAC-GPTV---TANF 545 (615)
Q Consensus 470 ~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~-~~~~---~~~~ 545 (615)
.-++.+|...+...|.....-+..+++.|.++ ..+.++++...+...-..+|..+...+-.+.... ++.. +...
T Consensus 388 ~eLl~fL~~~d~~~k~~~as~I~~laEkfaP~--k~W~idtml~Vl~~aG~~V~~dv~~nll~LIa~~~~e~~~y~~~rL 465 (866)
T KOG1062|consen 388 KELLEFLESSDEDFKADIASKIAELAEKFAPD--KRWHIDTMLKVLKTAGDFVNDDVVNNLLRLIANAFQELHEYAVLRL 465 (866)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHhcCCc--chhHHHHHHHHHHhcccccchhhHHHHHHHHhcCCcchhhHHHHHH
Confidence 45556665567778888888999999999875 2345666777666655556666666555554332 3221 1111
Q ss_pred hHHHHHh-hCCCCCchHHHHHHHHHHHHhHhhhh--------hhHHhhHHHHHhhh--cCCCCccHHHHHHHHHHHHh
Q psy14014 546 LLPTVLN-MAGDNVANVRFNVAKTLQKIGPILET--------NVIQSQVKPALDKL--NGDTDVDVKYFAQEAISSIA 612 (615)
Q Consensus 546 i~~~l~~-~~~D~~~~vr~~a~~~l~~l~~~~~~--------~~~~~~~~~~l~~l--~~d~d~~v~~~a~~a~~~~~ 612 (615)
....... ++.-..+...+-+.++++.....+=+ ..-.+.+...+.++ ....+..++.+|..|+-.+.
T Consensus 466 y~a~~~~~~~~is~e~l~qVa~W~IGEYGdlll~~~~~~~p~~vtesdivd~l~~v~~~~~s~~~tk~yal~Al~KLS 543 (866)
T KOG1062|consen 466 YLALSEDTLLDISQEPLLQVASWCIGEYGDLLLDGANEEEPIKVTESDIVDKLEKVLMSHSSDSTTKGYALTALLKLS 543 (866)
T ss_pred HHHHhhhhhhhhhhhhHHHHHHHHhhhhhHHhhcCccccCCCcCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 1111111 12223445567788999887633211 12234455555554 24446899999998886653
No 64
>KOG1991|consensus
Probab=99.05 E-value=3e-05 Score=81.35 Aligned_cols=431 Identities=16% Similarity=0.172 Sum_probs=216.4
Q ss_pred hHHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhh-cCCcH--HHHHHHHHHhccccC-CCCCcchhh
Q psy14014 14 PIAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTET-IYDED--EVLLALAEQLGTFTP-NVGGPEYVH 89 (615)
Q Consensus 14 ~i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~-~~~~~--~vr~~a~~~l~~l~~-~~~~~~~~~ 89 (615)
.+...+.+--++|+++|..|.+.|..+-+. . ..++.+.+. .+++. +||++++.-+.+.+. .....+ .+
T Consensus 5 ~l~~~~~~T~d~d~~~R~~AE~~L~q~~K~------p-gFv~~lLqIi~~d~~~l~vrqaaaIYlKN~I~~~W~~~~-~~ 76 (1010)
T KOG1991|consen 5 SLLQIFRATIDSDAKERKAAEQQLNQLEKQ------P-GFVSSLLQIIMDDGVPLPVRQAAAIYLKNKITKSWSSHE-AP 76 (1010)
T ss_pred HHHHHHHHhcCCChHHHHHHHHHHHHhhcC------C-cHHHHHHHHHHccCCchhHHHHHHHHHHHHHHhcCCccC-CC
Confidence 444555554466799999999999988542 2 233344443 34443 489999988876542 222111 00
Q ss_pred hchHHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHH
Q psy14014 90 CLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELR 169 (615)
Q Consensus 90 ~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~ 169 (615)
. .| ...-.++...+|+.-++++... ++.++..+.-.+......+ -+..+..++
T Consensus 77 g-~~--~~I~e~dk~~irenIl~~iv~~-----p~~iRvql~~~l~~Ii~~D-------------------~p~~Wp~l~ 129 (1010)
T KOG1991|consen 77 G-RP--FGIPEEDKAVIRENILETIVQV-----PELIRVQLTACLNTIIKAD-------------------YPEQWPGLL 129 (1010)
T ss_pred C-Cc--CCCChHHHHHHHHHHHHHHHhC-----chHHHHHHHHHHHHHHhcC-------------------CcccchhHH
Confidence 0 00 0011233456666666655443 2333333333322222221 113345566
Q ss_pred HHHHHHhCCCChHHHHHHHHhHHHHHHHhch-------------hhhHhhhHHHHHHhhccCchh---HHHHHHHHHHHH
Q psy14014 170 SHFRNLCQDDTPMVRRAAAGKLGELAKVVEV-------------DYLKTDIIPMFVNLAQDEQDS---VRLLAVEACVSI 233 (615)
Q Consensus 170 ~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~-------------~~~~~~ll~~l~~~~~d~~~~---vr~~a~~~l~~l 233 (615)
+....+++..+...-..++-++..+++.... +...+.++..+..++.+++.. ..+..++.+..+
T Consensus 130 d~i~~~Lqs~~~~~vy~aLl~l~qL~k~ye~k~~eeR~~l~~~v~~~fP~il~~~~~ll~~~s~~s~el~klIlKifks~ 209 (1010)
T KOG1991|consen 130 DKIKNLLQSQDANHVYGALLCLYQLFKTYEWKKDEERQPLGEAVEELFPDILQIFNGLLSQESYQSVELQKLILKIFKSL 209 (1010)
T ss_pred HHHHHHhcCcchhhHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHH
Confidence 6667777777766666777777777765431 011223444444455555433 233333333333
Q ss_pred Hhh-cChh----hHHHhHHHHHHHhc-----------------CCCChHHHHHHHHHHHHHHHHhCccch----hh----
Q psy14014 234 ASL-LSQS----DVEQLVMPTLRQCS-----------------GDTSWRVRYMVADKFTDLQKAVGPEIT----KT---- 283 (615)
Q Consensus 234 ~~~-~~~~----~~~~~l~~~l~~~~-----------------~d~~~~vR~~~~~~l~~l~~~~~~~~~----~~---- 283 (615)
+-+ +|.. ......+.++...+ +++-|++++-++..+.++..-+|+.-. ..
T Consensus 210 ~~~~LP~~L~~~~~f~~W~~l~l~i~~rpvP~E~l~~d~e~R~~~~wwK~KKWa~~~L~Rlf~Ryg~~~~~~~~y~~Fa~ 289 (1010)
T KOG1991|consen 210 IYYELPLELSAPETFTSWMELFLSILNRPVPVEVLSLDPEDRSSWPWWKCKKWALHILNRLFERYGSPSLVVPEYKEFAQ 289 (1010)
T ss_pred HHHhCCHHhhCchhHHHHHHHHHHHHcCCCChhcccCChhhcccccchhhHHHHHHHHHHHHHHhCCccccchhhHHHHH
Confidence 222 2221 11111222222221 234588999999999999887775321 11
Q ss_pred --------hHHHHHHHhhc---C---CcHHHHHHHHHHHHHHHhhcccc-----chhHHHHHhhHHHHHH------h-hC
Q psy14014 284 --------DLVQAFQMLLK---D---SEAEVRAAAANKVRDFCQNLDAY-----NQENIIMTYILPYVKD------L-VA 337 (615)
Q Consensus 284 --------~l~~~l~~~l~---d---~~~~vr~~a~~~l~~~~~~~~~~-----~~~~~~~~~l~p~l~~------~-~~ 337 (615)
.++..+.+.+. . -.+.|-..++..+......-..- .....+.+-++|.+.- + -+
T Consensus 290 ~f~~n~~~~ile~~lk~l~~~~~~~yls~rvl~~~l~fl~~~Vs~~~twkll~PHl~~ii~~vIFPlmc~~d~deelwe~ 369 (1010)
T KOG1991|consen 290 MFLKNFAQGILEVFLKILEQWRQQLYLSDRVLYYLLNFLEQCVSHASTWKLLKPHLQVIIQDVIFPLMCFNDEDEELWEE 369 (1010)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHhhhhhcCCCcccHHHHhc
Confidence 12222222211 0 11222222222222211110000 0000112223333321 1 14
Q ss_pred CCCHHHHH-------------HHHHHHHhhchhhcchhhhhhhHHHHHHhhc------CC--ChhHHHHHHHhhhHhhhh
Q psy14014 338 DPNQHVKS-------------ALASVIMGLSPILGKHNTVDHLLPLFLSQLK------DE--CPEVRLNIISNLDCVNEV 396 (615)
Q Consensus 338 d~~~~vR~-------------~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~------d~--~~~vr~~a~~~l~~l~~~ 396 (615)
|+...+|+ ++...+..++...|++.+ +.+++.+...++ .+ ++.-+.+|+..++.+...
T Consensus 370 DP~EYiR~~~Di~ed~~sp~~Aa~~~l~~~~~KR~ke~l-~k~l~F~~~Il~~~~~~~~~~~~~rqkdGAL~~vgsl~~~ 448 (1010)
T KOG1991|consen 370 DPYEYIRKKFDIFEDGYSPDTAALDFLTTLVSKRGKETL-PKILSFIVDILTRYKEASPPNKNPRQKDGALRMVGSLASI 448 (1010)
T ss_pred CHHHHHHhcCchhcccCCCcHHHHHHHHHHHHhcchhhh-hhHHHHHHHHHHhhcccCCCccChhhhhhHHHHHHHHHHH
Confidence 56667763 556666777766666543 445555555554 22 345567899988888755
Q ss_pred hchhH-HHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHH-hhhChHhHHHHHHHHHHH
Q psy14014 397 IGIQQ-WRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLA-GQLGVEFFDEKLNALCMT 474 (615)
Q Consensus 397 ~~~~~-~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~-~~~~~~~~~~~l~~~l~~ 474 (615)
+..+. +...+ +++ +. +.+.-..+++.--.|..+|..++.++ ..+.........+....+
T Consensus 449 L~K~s~~~~~m---E~f---------------lv-~hVfP~f~s~~g~Lrarac~vl~~~~~~df~d~~~l~~ale~t~~ 509 (1010)
T KOG1991|consen 449 LLKKSPYKSQM---EYF---------------LV-NHVFPEFQSPYGYLRARACWVLSQFSSIDFKDPNNLSEALELTHN 509 (1010)
T ss_pred HccCCchHHHH---HHH---------------HH-HHhhHhhcCchhHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHH
Confidence 43221 11111 111 00 23333456666678999999999988 344443334455666666
Q ss_pred hcC-CcchHHHHHHHHHHHHHHHHhC
Q psy14014 475 WLV-DHVYAIREAATLNLKKLVEQFG 499 (615)
Q Consensus 475 ~l~-d~~~~vR~~a~~~l~~l~~~~~ 499 (615)
.+. |+.-+||..|+-++..+.....
T Consensus 510 ~l~~d~~lPV~VeAalALq~fI~~~~ 535 (1010)
T KOG1991|consen 510 CLLNDNELPVRVEAALALQSFISNQE 535 (1010)
T ss_pred HhccCCcCchhhHHHHHHHHHHhcch
Confidence 665 8999999999999999988764
No 65
>KOG1248|consensus
Probab=99.04 E-value=6.3e-05 Score=80.61 Aligned_cols=569 Identities=13% Similarity=0.095 Sum_probs=305.4
Q ss_pred HHHHHhcCccHHHHHHHHhcHHHHHHHhCcc---hhhccchhhhhhhcCCcHHH---------HHHHHHHhccccCCCCC
Q psy14014 17 VLIDELKNEDVQLRLNSIKKLSTIALALGQE---RTRGELIPFLTETIYDEDEV---------LLALAEQLGTFTPNVGG 84 (615)
Q Consensus 17 ~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~---~~~~~ll~~l~~~~~~~~~v---------r~~a~~~l~~l~~~~~~ 84 (615)
.+|.-+...+..++..+++.+..+....++. ...-.++-.+.++--+.+.+ -..+-.++...-... .
T Consensus 228 ~lL~i~~~s~v~v~~~~~q~l~~lf~~~~~~l~a~~~a~lL~al~~l~ps~~D~~~t~~W~~v~~~~~~~la~~q~~~-~ 306 (1176)
T KOG1248|consen 228 VLLNITTESPVLVLLEVLQCLHSLFKKHPTALAAELNARLLTALMTLSPSENDDLLTVAWLKVLNEAHDILATLQEEK-A 306 (1176)
T ss_pred HHHhhcccchHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHhCCCccchHHHHHHHHHHHHHHHHHHHhCHHH-H
Confidence 4455566677778888999988887655442 12223333333332222211 122222222211110 0
Q ss_pred cchhhhchHHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHH-HHHhhcCCCcchhhhHHhhhhhhccCCChh
Q psy14014 85 PEYVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPL-VQRLASGDWFTSRTSACGLFSVCYPRVTAG 163 (615)
Q Consensus 85 ~~~~~~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~-l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~ 163 (615)
-...+.+++++..+.....+++-+.+-+++..+.+.... ..+.+... +..+..-....+=..+..++..+++.+++.
T Consensus 307 ~~~~~~~~~~~~t~~~s~~~e~~q~a~q~l~~il~~sv~--~~~~~c~~~~~~~l~~kf~~~~~~ilqi~s~~fek~G~~ 384 (1176)
T KOG1248|consen 307 LQALPRLFSLFFTILESLIEELVQAASQSLKEILKESVT--VIDALCSKQLHSLLDYKFHAVWRFILQILSALFEKCGEL 384 (1176)
T ss_pred HHhhhhhhhHHHHHHhcccHHHHHHHHHHHHHHhcccCc--ccHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHhhhh
Confidence 123455677777777788888889999998888776554 11111111 111111111122234456666666666554
Q ss_pred hHHHHHHHHHHHh---CCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChh
Q psy14014 164 VKAELRSHFRNLC---QDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQS 240 (615)
Q Consensus 164 ~~~~l~~~l~~l~---~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~ 240 (615)
.-.++.+.+..++ .+++..-+...=+++|.-....|++.... ++|+=. -.+.....|..-+-.|..-....+-.
T Consensus 385 s~~~l~~~L~~l~~lr~~~d~~~~~~ld~~IGSAV~AmGPe~vL~-~lpLnl--~~~s~~~~RsWLLPvLR~~i~~A~La 461 (1176)
T KOG1248|consen 385 SGPELTKTLEGLCDLRASPDFFHKLQLDQCIGSAVRAMGPERVLT-ILPLNL--HAESLSFTRSWLLPVLRDYIIGASLA 461 (1176)
T ss_pred cCHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHhhCHHHHHH-Hcchhc--cccccccchhHhHHHHHHhhccCcHH
Confidence 4444444444333 34555566677778888888888865332 333322 33344445554444444433333444
Q ss_pred hHHHhHHHHHHHh------cCCCChH--HHHHHHHHHHHHHHHhCccch-----hhhHHHHHHHhhcCCcHHHHHHHHHH
Q psy14014 241 DVEQLVMPTLRQC------SGDTSWR--VRYMVADKFTDLQKAVGPEIT-----KTDLVQAFQMLLKDSEAEVRAAAANK 307 (615)
Q Consensus 241 ~~~~~l~~~l~~~------~~d~~~~--vR~~~~~~l~~l~~~~~~~~~-----~~~l~~~l~~~l~d~~~~vr~~a~~~ 307 (615)
.+..+++|+..++ +.+..-. +=.++...|..+...|..... -..+.|.+...+.... +.|...+.+
T Consensus 462 ~F~~~ivpla~sl~~K~~~l~~~~~~~~~~~tl~~QLW~LLP~FC~~P~Dl~~sF~~la~~l~~al~~~~-elr~~Ic~s 540 (1176)
T KOG1248|consen 462 FFTEYIVPLAMSLQLKAKKLKEAGSQVSLYDTLVDQLWSLLPGFCNYPVDLAESFTDLAPILGAALLKRP-ELRETICNS 540 (1176)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhccCcHHHHHHHHHHHHHhChhhhCCCccHHHHHHHHHHHHHHHHhcch-HhHHHHHHH
Confidence 5566677765443 2222211 223333334444444433221 2245566666555444 888888888
Q ss_pred HHHHHhhccccc----hh---HHHHHhhHHHHHHhhCC------CCHHHHHHHHHHHH-hhchhhcch------------
Q psy14014 308 VRDFCQNLDAYN----QE---NIIMTYILPYVKDLVAD------PNQHVKSALASVIM-GLSPILGKH------------ 361 (615)
Q Consensus 308 l~~~~~~~~~~~----~~---~~~~~~l~p~l~~~~~d------~~~~vR~~~~~~l~-~l~~~~g~~------------ 361 (615)
|..++..-.+.. .. ..+-..++|.+.++-.. .....|...+..+. ...+..+.+
T Consensus 541 L~~Lv~~n~~~~~a~e~~e~~s~~AknfL~~lfn~ytq~~~~~~~~l~~~~~~L~~i~~~~~~~t~~dv~~~l~~s~~e~ 620 (1176)
T KOG1248|consen 541 LRMLVEQNKPSSDAAENKEVLSNDAKNFLPRLFNVYTQTVAAGRKILASRSTVLEIIRVDYFTVTPTDVVGSLKDSAGEL 620 (1176)
T ss_pred HHHHHHcCCCcchHHHHHHHHhhhhhHHHHHHHHHhcCCCccccccHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhH
Confidence 888777531111 00 11223445554443221 22334444333332 111111000
Q ss_pred ------hh----hhhhHHHHH------------------H-hhcCCChhHHHHHHHhhhHhhhhhchhH-HHHHHHHHhh
Q psy14014 362 ------NT----VDHLLPLFL------------------S-QLKDECPEVRLNIISNLDCVNEVIGIQQ-WRVRLAIIEY 411 (615)
Q Consensus 362 ------~~----~~~l~p~l~------------------~-~l~d~~~~vr~~a~~~l~~l~~~~~~~~-~~~~~~i~~~ 411 (615)
.. .-.++..+. + .-+..+..+|..+.+.|..+......+. ..+++
T Consensus 621 as~~~~s~~~~~~~slLdl~~~~a~~~~e~~vs~l~~v~~~~e~~~~~~vQkK~yrlL~~l~~~~s~~~~~~q~i----- 695 (1176)
T KOG1248|consen 621 ASDLDESVASFKTLSLLDLLIALAPVQTESQVSKLFTVDPEFENSSSTKVQKKAYRLLEELSSSPSGEGLVEQRI----- 695 (1176)
T ss_pred hccchhhhhhHHHHHHHHHHHhhhccccchhHHHHHHhhHHhhccccHHHHHHHHHHHHHHhcCCchhhHHHHHH-----
Confidence 00 000111111 1 1112244566666666555544311111 11111
Q ss_pred hhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHh--HHHHHHHHHHHhcCCcchHHHHHHHH
Q psy14014 412 MPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEF--FDEKLNALCMTWLVDHVYAIREAATL 489 (615)
Q Consensus 412 l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l~d~~~~vR~~a~~ 489 (615)
+.+. ..+.+..++.....|...+.++..+.+.++.++ +....+|-++=.+++.+..-|..|..
T Consensus 696 --------------~~I~-n~L~ds~qs~~~~~~~~rl~~L~~L~~~~~~e~~~~i~k~I~EvIL~~Ke~n~~aR~~Af~ 760 (1176)
T KOG1248|consen 696 --------------DDIF-NSLLDSFQSSSSPAQASRLKCLKRLLKLLSAEHCDLIPKLIPEVILSLKEVNVKARRNAFA 760 (1176)
T ss_pred --------------HHHH-HHHHHHHhccchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHhcccccHHHHhhHHH
Confidence 0111 244455566677789999999999999888543 22444554444458888899999999
Q ss_pred HHHHHH--HHh---ChHH---hhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhh---ChhhHHHhhHHHHHhhCCCCC
Q psy14014 490 NLKKLV--EQF---GSEW---AQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEAC---GPTVTANFLLPTVLNMAGDNV 558 (615)
Q Consensus 490 ~l~~l~--~~~---~~~~---~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~---~~~~~~~~i~~~l~~~~~D~~ 558 (615)
+|..+. ..+ |.+. ..+.+++.+...+......++...+-+++.+.... ..+.+.+.++..+.-++....
T Consensus 761 lL~~i~~i~~~~d~g~e~~~~~lnefl~~Isagl~gd~~~~~as~Ivai~~il~e~~~~ld~~~l~~li~~V~~~L~s~s 840 (1176)
T KOG1248|consen 761 LLVFIGAIQSSLDDGNEPASAILNEFLSIISAGLVGDSTRVVASDIVAITHILQEFKNILDDETLEKLISMVCLYLASNS 840 (1176)
T ss_pred HHHHHHHHHhhhcccccchHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhcCC
Confidence 998888 322 3322 33456666666666666666666677777776543 334567788888888999999
Q ss_pred chHHHHHHHHHHHHhHhhhhhhHH---hhHHHHHhhhcCCCCccHHHHHHHHHHHHh
Q psy14014 559 ANVRFNVAKTLQKIGPILETNVIQ---SQVKPALDKLNGDTDVDVKYFAQEAISSIA 612 (615)
Q Consensus 559 ~~vr~~a~~~l~~l~~~~~~~~~~---~~~~~~l~~l~~d~d~~v~~~a~~a~~~~~ 612 (615)
+.++..|+..+..++..++..... +.+.|.+-.+.+|....+|-....-++.+-
T Consensus 841 reI~kaAI~fikvlv~~~pe~~l~~~~~~LL~sll~ls~d~k~~~r~Kvr~LlekLi 897 (1176)
T KOG1248|consen 841 REIAKAAIGFIKVLVYKFPEECLSPHLEELLPSLLALSHDHKIKVRKKVRLLLEKLI 897 (1176)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 999999999999999888755443 334555555678888889888888777664
No 66
>KOG2259|consensus
Probab=99.02 E-value=4.8e-08 Score=96.72 Aligned_cols=216 Identities=19% Similarity=0.176 Sum_probs=162.9
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcCh-----
Q psy14014 165 KAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQ----- 239 (615)
Q Consensus 165 ~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~----- 239 (615)
.+.+..-+..++.|.+++||..|++++-.+.+.+. ....+.....+.++|++..||.+|++.+...+...+.
T Consensus 196 ~~~~~~~l~~~~~~~D~~Vrt~A~eglL~L~eg~k---L~~~~Y~~A~~~lsD~~e~VR~aAvqlv~v~gn~~p~~~e~e 272 (823)
T KOG2259|consen 196 REHAARGLIYLEHDQDFRVRTHAVEGLLALSEGFK---LSKACYSRAVKHLSDDYEDVRKAAVQLVSVWGNRCPAPLERE 272 (823)
T ss_pred HHHHHHHHHHHhcCCCcchHHHHHHHHHhhccccc---ccHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhcCCCcccch
Confidence 44455557788899999999999999888877321 1234566667888999999999999998877776631
Q ss_pred ---hhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhC--------ccc----------------------------
Q psy14014 240 ---SDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVG--------PEI---------------------------- 280 (615)
Q Consensus 240 ---~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~--------~~~---------------------------- 280 (615)
.......+..++....|-+|.||-.+++.||.+-.... ++.
T Consensus 273 ~~e~kl~D~aF~~vC~~v~D~sl~VRV~AaK~lG~~~~vSee~i~QTLdKKlms~lRRkr~ahkrpk~l~s~GewSsGk~ 352 (823)
T KOG2259|consen 273 SEEEKLKDAAFSSVCRAVRDRSLSVRVEAAKALGEFEQVSEEIIQQTLDKKLMSRLRRKRTAHKRPKALYSSGEWSSGKE 352 (823)
T ss_pred hhhhhhHHHHHHHHHHHHhcCceeeeehHHHHhchHHHhHHHHHHHHHHHHHhhhhhhhhhcccchHHHHhcCCcccCcc
Confidence 23344567778888999999999999999987654210 000
Q ss_pred -----------------hhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHH
Q psy14014 281 -----------------TKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHV 343 (615)
Q Consensus 281 -----------------~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~v 343 (615)
........|+..++|+.-+||.+|..++..++..-+. +-...+.+|.++++|+...|
T Consensus 353 ~~advpsee~d~~~~siI~sGACGA~VhGlEDEf~EVR~AAV~Sl~~La~ssP~------FA~~aldfLvDMfNDE~~~V 426 (823)
T KOG2259|consen 353 WNADVPSEEDDEEEESIIPSGACGALVHGLEDEFYEVRRAAVASLCSLATSSPG------FAVRALDFLVDMFNDEIEVV 426 (823)
T ss_pred ccccCchhhccccccccccccccceeeeechHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHHHHhccHHHHH
Confidence 0001134566778899999999999999998875443 34567889999999999999
Q ss_pred HHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhH
Q psy14014 344 KSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDC 392 (615)
Q Consensus 344 R~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~ 392 (615)
|..++.++..++..+. +.+..++.+...+.|.+.+||.++-..|+.
T Consensus 427 RL~ai~aL~~Is~~l~---i~eeql~~il~~L~D~s~dvRe~l~elL~~ 472 (823)
T KOG2259|consen 427 RLKAIFALTMISVHLA---IREEQLRQILESLEDRSVDVREALRELLKN 472 (823)
T ss_pred HHHHHHHHHHHHHHhe---ecHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 9999999998877632 234568899999999999999988776654
No 67
>TIGR02270 conserved hypothetical protein. Members are found in Myxococcus xanthus (six members), Geobacter sulfurreducens, and Pseudomonas aeruginosa; a short protein homologous to the N-terminal region is found in Mesorhizobium loti. All sequence are from Proteobacteria. The function is unknown.
Probab=99.02 E-value=7.2e-08 Score=95.30 Aligned_cols=150 Identities=14% Similarity=0.047 Sum_probs=76.6
Q ss_pred hhhHHHHHHhh-ccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhh
Q psy14014 205 TDIIPMFVNLA-QDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKT 283 (615)
Q Consensus 205 ~~ll~~l~~~~-~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~ 283 (615)
...++.+...+ .|++.+++..+..++... ..+..+..+...+.|++..||..++++|+.+. ..
T Consensus 53 ~~a~~~L~~aL~~d~~~ev~~~aa~al~~~--------~~~~~~~~L~~~L~d~~~~vr~aaa~ALg~i~--------~~ 116 (410)
T TIGR02270 53 KAATELLVSALAEADEPGRVACAALALLAQ--------EDALDLRSVLAVLQAGPEGLCAGIQAALGWLG--------GR 116 (410)
T ss_pred HhHHHHHHHHHhhCCChhHHHHHHHHHhcc--------CChHHHHHHHHHhcCCCHHHHHHHHHHHhcCC--------ch
Confidence 44555555555 355555555444443221 12233555566666666666666666665432 23
Q ss_pred hHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhh
Q psy14014 284 DLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNT 363 (615)
Q Consensus 284 ~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~ 363 (615)
...+.+..++++.++.||..++.+++.... .-.+.+...++|+++.||..++.+++.+...
T Consensus 117 ~a~~~L~~~L~~~~p~vR~aal~al~~r~~-------------~~~~~L~~~L~d~d~~Vra~A~raLG~l~~~------ 177 (410)
T TIGR02270 117 QAEPWLEPLLAASEPPGRAIGLAALGAHRH-------------DPGPALEAALTHEDALVRAAALRALGELPRR------ 177 (410)
T ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHhhcc-------------ChHHHHHHHhcCCCHHHHHHHHHHHHhhccc------
Confidence 455555566666666666655555543111 1123444455566666666666666554321
Q ss_pred hhhhHHHHHHhhcCCChhHHHHHHHhhh
Q psy14014 364 VDHLLPLFLSQLKDECPEVRLNIISNLD 391 (615)
Q Consensus 364 ~~~l~p~l~~~l~d~~~~vr~~a~~~l~ 391 (615)
...|.+...+.|.++.||..|+.++.
T Consensus 178 --~a~~~L~~al~d~~~~VR~aA~~al~ 203 (410)
T TIGR02270 178 --LSESTLRLYLRDSDPEVRFAALEAGL 203 (410)
T ss_pred --cchHHHHHHHcCCCHHHHHHHHHHHH
Confidence 23444455555556666666655554
No 68
>KOG1248|consensus
Probab=99.02 E-value=2.5e-05 Score=83.48 Aligned_cols=484 Identities=17% Similarity=0.125 Sum_probs=278.0
Q ss_pred HHHhcHHHHHHHhCcchhhccchhhhhhhcC---CcH-HHHHHHHHHhccccCCCCCcchhhhchHHHhhhhcCchhHHH
Q psy14014 32 NSIKKLSTIALALGQERTRGELIPFLTETIY---DED-EVLLALAEQLGTFTPNVGGPEYVHCLLPPLESLATVEETVVR 107 (615)
Q Consensus 32 ~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~---~~~-~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~l~~~~~~~vr 107 (615)
.+++.++.+...+|+- ..+++.|-|..+.. +++ .-+..+-+++|..+..+| |+.+=.++|+=. ..+.....|
T Consensus 369 ~ilqi~s~~fek~G~~-s~~~l~~~L~~l~~lr~~~d~~~~~~ld~~IGSAV~AmG-Pe~vL~~lpLnl--~~~s~~~~R 444 (1176)
T KOG1248|consen 369 FILQILSALFEKCGEL-SGPELTKTLEGLCDLRASPDFFHKLQLDQCIGSAVRAMG-PERVLTILPLNL--HAESLSFTR 444 (1176)
T ss_pred HHHHHHHHHHHHhhhh-cCHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHhhC-HHHHHHHcchhc--cccccccch
Confidence 4566667776777763 55666666654322 222 244466666666665554 333333343311 233334444
Q ss_pred HHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcC------CCcch---hhhHH---hhhhhhccCCC--hhhHHHHHHHHH
Q psy14014 108 DKAVESLRLISAQHSPHDLEAHFVPLVQRLASG------DWFTS---RTSAC---GLFSVCYPRVT--AGVKAELRSHFR 173 (615)
Q Consensus 108 ~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~------~~~~~---r~~a~---~~l~~~~~~~~--~~~~~~l~~~l~ 173 (615)
.=-+-.|+.-....+-..+.+++.|+...+..- ....+ +.... .+++.+|.+-. .+....+.+.+.
T Consensus 445 sWLLPvLR~~i~~A~La~F~~~ivpla~sl~~K~~~l~~~~~~~~~~~tl~~QLW~LLP~FC~~P~Dl~~sF~~la~~l~ 524 (1176)
T KOG1248|consen 445 SWLLPVLRDYIIGASLAFFTEYIVPLAMSLQLKAKKLKEAGSQVSLYDTLVDQLWSLLPGFCNYPVDLAESFTDLAPILG 524 (1176)
T ss_pred hHhHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHhhhhccCcHHHHHHHHHHHHHhChhhhCCCccHHHHHHHHHHHHH
Confidence 444455555554444456667777776654321 11111 11111 23333433321 122345666665
Q ss_pred HHhCCCChHHHHHHHHhHHHHHHHhch-----------hhhHhhhHHHHHHhhccCc------hhHHHHHHHHHH-HHHh
Q psy14014 174 NLCQDDTPMVRRAAAGKLGELAKVVEV-----------DYLKTDIIPMFVNLAQDEQ------DSVRLLAVEACV-SIAS 235 (615)
Q Consensus 174 ~l~~d~~~~vR~~a~~~l~~l~~~~~~-----------~~~~~~ll~~l~~~~~d~~------~~vr~~a~~~l~-~l~~ 235 (615)
..+.- .++.|..+|.+|..+.+.-.+ ...-..++|.+..+.+... ...|..-+..+. ...+
T Consensus 525 ~al~~-~~elr~~Ic~sL~~Lv~~n~~~~~a~e~~e~~s~~AknfL~~lfn~ytq~~~~~~~~l~~~~~~L~~i~~~~~~ 603 (1176)
T KOG1248|consen 525 AALLK-RPELRETICNSLRMLVEQNKPSSDAAENKEVLSNDAKNFLPRLFNVYTQTVAAGRKILASRSTVLEIIRVDYFT 603 (1176)
T ss_pred HHHhc-chHhHHHHHHHHHHHHHcCCCcchHHHHHHHHhhhhhHHHHHHHHHhcCCCccccccHHHHHHHHHHHHHHHhh
Confidence 55444 338999999999888876311 1123456777666654332 223333333332 2222
Q ss_pred hcChhhHHHhHHHHHHHhcCCCChHHH----HHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHH
Q psy14014 236 LLSQSDVEQLVMPTLRQCSGDTSWRVR----YMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDF 311 (615)
Q Consensus 236 ~~~~~~~~~~l~~~l~~~~~d~~~~vR----~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~ 311 (615)
..+.+ ....+...+.+...+.+..++ ......+..++....... ...+..+.-...+.....+|..+...|..+
T Consensus 604 ~t~~d-v~~~l~~s~~e~as~~~~s~~~~~~~slLdl~~~~a~~~~e~~-vs~l~~v~~~~e~~~~~~vQkK~yrlL~~l 681 (1176)
T KOG1248|consen 604 VTPTD-VVGSLKDSAGELASDLDESVASFKTLSLLDLLIALAPVQTESQ-VSKLFTVDPEFENSSSTKVQKKAYRLLEEL 681 (1176)
T ss_pred cccHH-HHHHHHHHHHhHhccchhhhhhHHHHHHHHHHHhhhccccchh-HHHHHHhhHHhhccccHHHHHHHHHHHHHH
Confidence 22222 223344455555555543333 333333444444332221 223333333344455788999999999998
Q ss_pred HhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcch--hhhhhhHHHHHHhhcCCChhHHHHHHHh
Q psy14014 312 CQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKH--NTVDHLLPLFLSQLKDECPEVRLNIISN 389 (615)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~--~~~~~l~p~l~~~l~d~~~~vr~~a~~~ 389 (615)
+..-..+.........+...+.+-+++.....|...+.++..+.+..+.+ .+....+|-++-.+++.+..-|..++.+
T Consensus 682 ~~~~s~~~~~~q~i~~I~n~L~ds~qs~~~~~~~~rl~~L~~L~~~~~~e~~~~i~k~I~EvIL~~Ke~n~~aR~~Af~l 761 (1176)
T KOG1248|consen 682 SSSPSGEGLVEQRIDDIFNSLLDSFQSSSSPAQASRLKCLKRLLKLLSAEHCDLIPKLIPEVILSLKEVNVKARRNAFAL 761 (1176)
T ss_pred hcCCchhhHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHhcccccHHHHhhHHHH
Confidence 88622222223345667777777888888899999999999998877743 2344556655555588888899999998
Q ss_pred hhHhhh--hh---chhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhC---h
Q psy14014 390 LDCVNE--VI---GIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLG---V 461 (615)
Q Consensus 390 l~~l~~--~~---~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~---~ 461 (615)
|..+.. .. |.+. ....+-+++ +.+...+-....+++..-+-++..+...++ .
T Consensus 762 L~~i~~i~~~~d~g~e~--~~~~lnefl------------------~~Isagl~gd~~~~~as~Ivai~~il~e~~~~ld 821 (1176)
T KOG1248|consen 762 LVFIGAIQSSLDDGNEP--ASAILNEFL------------------SIISAGLVGDSTRVVASDIVAITHILQEFKNILD 821 (1176)
T ss_pred HHHHHHHHhhhcccccc--hHHHHHHHH------------------HHHHhhhcccHHHHHHHHHHHHHHHHHHHhcccc
Confidence 877763 11 2111 111122233 233333333333444443555555554432 3
Q ss_pred HhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHh---hhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhC
Q psy14014 462 EFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWA---QSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACG 538 (615)
Q Consensus 462 ~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~---~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~ 538 (615)
+.+...++..+--++.....+++.+|+..+..++..+..... .+.++|.++.+..|.+..+|...-..+..++..+|
T Consensus 822 ~~~l~~li~~V~~~L~s~sreI~kaAI~fikvlv~~~pe~~l~~~~~~LL~sll~ls~d~k~~~r~Kvr~LlekLirkfg 901 (1176)
T KOG1248|consen 822 DETLEKLISMVCLYLASNSREIAKAAIGFIKVLVYKFPEECLSPHLEELLPSLLALSHDHKIKVRKKVRLLLEKLIRKFG 901 (1176)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHcCCHHHHhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhC
Confidence 445667777777789999999999999999999998876543 35689999999999999999999999999999998
Q ss_pred hhhH
Q psy14014 539 PTVT 542 (615)
Q Consensus 539 ~~~~ 542 (615)
.+..
T Consensus 902 ~~eL 905 (1176)
T KOG1248|consen 902 AEEL 905 (1176)
T ss_pred HHHH
Confidence 8764
No 69
>KOG4535|consensus
Probab=98.99 E-value=5.1e-07 Score=86.33 Aligned_cols=294 Identities=14% Similarity=0.093 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHHHHHhCccc-hhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccch-----h----HHHHHhhH
Q psy14014 260 RVRYMVADKFTDLQKAVGPEI-TKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQ-----E----NIIMTYIL 329 (615)
Q Consensus 260 ~vR~~~~~~l~~l~~~~~~~~-~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~-----~----~~~~~~l~ 329 (615)
.+|-.+.+.+..++.+++.-. ..-++.-++...+.+..+.++..+...+..+...+..+.. . ..++..++
T Consensus 270 ~~rle~~qvl~~~a~~~~~~~~~~~~l~RvI~~~~~~~~p~~~l~~a~ll~~lg~~lv~~~~P~~~k~~~q~~~fw~~~l 349 (728)
T KOG4535|consen 270 PMRLEALQVLTLLARYFSMTQAYLMELGRVICKCMGEADPSIQLHGAKLLEELGTGLIQQYKPDSTKAPDQRAPFWTMML 349 (728)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCChHHHHHHHHHHHHHHHHHhhhcCCCcccchhhhccHHHHHc
Confidence 367777788888877766321 1224555666778899999999999999988876542211 0 11222222
Q ss_pred --HHHHHhhCCCCHHHHHHHHHHHHhhchhh--cchhhhhhhHHHHHHhhcCC-ChhHHHHHHHhhhHhhhhhchhHHHH
Q psy14014 330 --PYVKDLVADPNQHVKSALASVIMGLSPIL--GKHNTVDHLLPLFLSQLKDE-CPEVRLNIISNLDCVNEVIGIQQWRV 404 (615)
Q Consensus 330 --p~l~~~~~d~~~~vR~~~~~~l~~l~~~~--g~~~~~~~l~p~l~~~l~d~-~~~vr~~a~~~l~~l~~~~~~~~~~~ 404 (615)
|.=...-+...+..+.+.|.++.++.... |-++-.....|.|.....|. +.-|+.+|++++..++-+-+......
T Consensus 350 ~~p~~~~~YDs~~~Tl~~s~Cdals~i~~~~f~~lpn~~~T~~~~Fl~GC~d~~~~lv~~aA~Ra~~VyVLHp~lr~d~~ 429 (728)
T KOG4535|consen 350 NGPLPRALYDSEHPTLQASACDALSSILPEAFSNLPNDRQTLCITFLLGCNDSKNRLVKAAASRALGVYVLHPCLRQDVI 429 (728)
T ss_pred cCCChhhhhhhcCCCchhHHHHHHhhcCchhhcCCCCcchhhhHHHHhcccchHHHHHHHHHHhhceeEEeccchhhhHH
Confidence 21112223344566778888888776431 21222235677787777753 34478888888776654433211110
Q ss_pred HHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhC-----hHhHHHHH----HHHHHHh
Q psy14014 405 RLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLG-----VEFFDEKL----NALCMTW 475 (615)
Q Consensus 405 ~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~-----~~~~~~~l----~~~l~~~ 475 (615)
. .+... ..+...+.|+....|..++.+++.|...+- ++.+.+.+ +..++..
T Consensus 430 f-------------------v~~aa-~~il~sl~d~~ln~r~KaawtlgnITdAL~~~~Ps~~s~~eR~sg~ll~~~~~~ 489 (728)
T KOG4535|consen 430 F-------------------VADAA-NAILMSLEDKSLNVRAKAAWSLGNITDALIVNMPTPDSFQERFSGLLLLKMLRS 489 (728)
T ss_pred H-------------------HHHHH-HHHHHHhhhHhHhHHHHHHHHhhhhHHHHHcCCCCchHHHHHHHHHHHHHHHHH
Confidence 0 00000 233444556666677777777777766541 11122222 2222222
Q ss_pred c---CCcchHHHHHHHHHHHHHHHHhChH--HhhhchhH-HHHh----hhcCCCchHHHHHHHHHHHHHhhhC----hhh
Q psy14014 476 L---VDHVYAIREAATLNLKKLVEQFGSE--WAQSTVIP-KVVA----MSRDQNYLHRMTCLFCINVLAEACG----PTV 541 (615)
Q Consensus 476 l---~d~~~~vR~~a~~~l~~l~~~~~~~--~~~~~i~~-~l~~----~~~d~~~~~R~~a~~~l~~l~~~~~----~~~ 541 (615)
. .-.++.||..|+++++.+...+.+- .....++. ...+ .....+..||.++|+++|++.+.-. ...
T Consensus 490 A~~~~Ad~dkV~~navraLgnllQvlq~i~~~~~~e~~~~~~~~l~~~v~~~~~~kV~WNaCya~gNLfkn~a~~lq~~~ 569 (728)
T KOG4535|consen 490 AIEASADKDKVKSNAVRALGNLLQFLQPIEKPTFAEIIEESIQALISTVLTEAAMKVRWNACYAMGNLFKNPALPLQTAP 569 (728)
T ss_pred HHHhhhhhhhhhhHHHHHHhhHHHHHHHhhhccHHHHHHHHHHhcccceecccccccchHHHHHHHHhhcCccccccCCC
Confidence 1 2236779999999999988766421 11111221 1122 2234578899999999999987522 233
Q ss_pred HHHhhHHHHHhhCC-CCCchHHHHHHHHHHHHh
Q psy14014 542 TANFLLPTVLNMAG-DNVANVRFNVAKTLQKIG 573 (615)
Q Consensus 542 ~~~~i~~~l~~~~~-D~~~~vr~~a~~~l~~l~ 573 (615)
+...++|.|..++. -++-.||..|+.+|..-.
T Consensus 570 wA~~~F~~L~~Lv~~~~NFKVRi~AA~aL~vp~ 602 (728)
T KOG4535|consen 570 WASQAFNALTSLVTSCKNFKVRIRAAAALSVPG 602 (728)
T ss_pred chHHHHHHHHHHHHHhccceEeehhhhhhcCCC
Confidence 56788999988775 477889999999997554
No 70
>COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion]
Probab=98.94 E-value=4.1e-05 Score=79.94 Aligned_cols=142 Identities=15% Similarity=0.099 Sum_probs=110.0
Q ss_pred HHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHh
Q psy14014 166 AELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQL 245 (615)
Q Consensus 166 ~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~ 245 (615)
..+++-+.+.....+.++|+.+-..+..+++..+.+. -...+.+..=++|+++.+|..|+.+++.+ +...+...
T Consensus 54 ssLf~dViK~~~trd~ElKrL~ylYl~~yak~~P~~~--lLavNti~kDl~d~N~~iR~~AlR~ls~l----~~~el~~~ 127 (757)
T COG5096 54 SSLFPDVIKNVATRDVELKRLLYLYLERYAKLKPELA--LLAVNTIQKDLQDPNEEIRGFALRTLSLL----RVKELLGN 127 (757)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCHHHH--HHHHHHHHhhccCCCHHHHHHHHHHHHhc----ChHHHHHH
Confidence 4445555555557889999999888888888766432 23456777778899999999999988764 45567788
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhh-HHHHHHHhhcCCcHHHHHHHHHHHHHHHhh
Q psy14014 246 VMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTD-LVQAFQMLLKDSEAEVRAAAANKVRDFCQN 314 (615)
Q Consensus 246 l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~-l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~ 314 (615)
+++.+.++++|++..||+.++-++..+.+. +++...+. ....+..++.|++|.|..+|+.++..+...
T Consensus 128 ~~~~ik~~l~d~~ayVRk~Aalav~kly~l-d~~l~~~~g~~~~l~~l~~D~dP~Vi~nAl~sl~~i~~e 196 (757)
T COG5096 128 IIDPIKKLLTDPHAYVRKTAALAVAKLYRL-DKDLYHELGLIDILKELVADSDPIVIANALASLAEIDPE 196 (757)
T ss_pred HHHHHHHHccCCcHHHHHHHHHHHHHHHhc-CHhhhhcccHHHHHHHHhhCCCchHHHHHHHHHHHhchh
Confidence 999999999999999999999999888754 33333333 677788889999999999999999877653
No 71
>KOG1243|consensus
Probab=98.91 E-value=2.3e-08 Score=100.49 Aligned_cols=184 Identities=14% Similarity=0.226 Sum_probs=163.3
Q ss_pred HHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHH
Q psy14014 431 LSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPK 510 (615)
Q Consensus 431 ~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~ 510 (615)
|.+.++.+..+-.+|...+..+..+...+.++.+.+.++|.+...+.|++..+|+.++.+|..++..++......+++..
T Consensus 333 p~l~kLF~~~Dr~iR~~LL~~i~~~i~~Lt~~~~~d~I~phv~~G~~DTn~~Lre~Tlksm~~La~kL~~~~Ln~Ellr~ 412 (690)
T KOG1243|consen 333 PVLLKLFKSPDRQIRLLLLQYIEKYIDHLTKQILNDQIFPHVALGFLDTNATLREQTLKSMAVLAPKLSKRNLNGELLRY 412 (690)
T ss_pred hhHHHHhcCcchHHHHHHHHhHHHHhhhcCHHhhcchhHHHHHhhcccCCHHHHHHHHHHHHHHHhhhchhhhcHHHHHH
Confidence 78889999999999999999999999999999999999999999999999999999999999999999988666778888
Q ss_pred HHhhhcCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHHHHh
Q psy14014 511 VVAMSRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALD 590 (615)
Q Consensus 511 l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~ 590 (615)
+..+-.|.....|.+..-|+|.++....+......+.-.+.+.+.|+-..-|.++..++....+.++.......+.|.+.
T Consensus 413 ~ar~q~d~~~~irtntticlgki~~~l~~~~R~~vL~~aftralkdpf~paR~a~v~~l~at~~~~~~~~va~kIlp~l~ 492 (690)
T KOG1243|consen 413 LARLQPDEHGGIRTNTTICLGKIAPHLAASVRKRVLASAFTRALKDPFVPARKAGVLALAATQEYFDQSEVANKILPSLV 492 (690)
T ss_pred HHhhCccccCcccccceeeecccccccchhhhccccchhhhhhhcCCCCCchhhhhHHHhhcccccchhhhhhhcccccc
Confidence 88887899999999999999999988776654444444556678999999999999999999888887777888899999
Q ss_pred hhcCCCCccHHHHHHHHHHHHhhc
Q psy14014 591 KLNGDTDVDVKYFAQEAISSIADS 614 (615)
Q Consensus 591 ~l~~d~d~~v~~~a~~a~~~~~~~ 614 (615)
.+.-|++..||.-|..++.-+.++
T Consensus 493 pl~vd~e~~vr~~a~~~i~~fl~k 516 (690)
T KOG1243|consen 493 PLTVDPEKTVRDTAEKAIRQFLEK 516 (690)
T ss_pred ccccCcccchhhHHHHHHHHHHhh
Confidence 999999999999999999877654
No 72
>KOG1059|consensus
Probab=98.87 E-value=0.00017 Score=73.14 Aligned_cols=218 Identities=13% Similarity=0.171 Sum_probs=143.6
Q ss_pred HHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhH
Q psy14014 125 DLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLK 204 (615)
Q Consensus 125 ~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~ 204 (615)
++...+-+-+..+.+.....+|+-|+.++-.++...++..+. -+|.|..-+.|+++.|..+|+..+.++++.-++..
T Consensus 140 dLARDLa~Dv~tLL~sskpYvRKkAIl~lykvFLkYPeAlr~-~FprL~EkLeDpDp~V~SAAV~VICELArKnPkny-- 216 (877)
T KOG1059|consen 140 DLARDLADDVFTLLNSSKPYVRKKAILLLYKVFLKYPEALRP-CFPRLVEKLEDPDPSVVSAAVSVICELARKNPQNY-- 216 (877)
T ss_pred hhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhhHhHhh-hHHHHHHhccCCCchHHHHHHHHHHHHHhhCCccc--
Confidence 444455555666666666778888887776666666555443 34566666799999999999999999998766542
Q ss_pred hhhHHHHHHhhcc-CchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHH---hC--c
Q psy14014 205 TDIIPMFVNLAQD-EQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKA---VG--P 278 (615)
Q Consensus 205 ~~ll~~l~~~~~d-~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~---~~--~ 278 (615)
-.+-|.|.+++.+ .+.++-.-.+..++.+...-| ..-..++|.+.+++..++. ..-+.+|+..+... .| +
T Consensus 217 L~LAP~ffkllttSsNNWmLIKiiKLF~aLtplEP--RLgKKLieplt~li~sT~A--mSLlYECvNTVVa~s~s~g~~d 292 (877)
T KOG1059|consen 217 LQLAPLFYKLLVTSSNNWVLIKLLKLFAALTPLEP--RLGKKLIEPITELMESTVA--MSLLYECVNTVVAVSMSSGMSD 292 (877)
T ss_pred ccccHHHHHHHhccCCCeehHHHHHHHhhccccCc--hhhhhhhhHHHHHHHhhHH--HHHHHHHHHHheeehhccCCCC
Confidence 2467887777653 344444444555555443322 2345688888888876553 22333343333221 12 2
Q ss_pred cc-hhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhc
Q psy14014 279 EI-TKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLS 355 (615)
Q Consensus 279 ~~-~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~ 355 (615)
+. ...-.+.-+..++.|.+++.+--++-++..+++.-+ ..+...-..+.+++.|.++.+|--++..+..+.
T Consensus 293 ~~asiqLCvqKLr~fiedsDqNLKYlgLlam~KI~ktHp------~~Vqa~kdlIlrcL~DkD~SIRlrALdLl~gmV 364 (877)
T KOG1059|consen 293 HSASIQLCVQKLRIFIEDSDQNLKYLGLLAMSKILKTHP------KAVQAHKDLILRCLDDKDESIRLRALDLLYGMV 364 (877)
T ss_pred cHHHHHHHHHHHhhhhhcCCccHHHHHHHHHHHHhhhCH------HHHHHhHHHHHHHhccCCchhHHHHHHHHHHHh
Confidence 11 122345567778899999999999999999887533 234555667778999999999998888887664
No 73
>KOG2274|consensus
Probab=98.80 E-value=0.00019 Score=74.71 Aligned_cols=171 Identities=13% Similarity=0.104 Sum_probs=103.3
Q ss_pred CchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHHHH--hChHHhhhchhHHHHh-hhc
Q psy14014 441 KWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLV-DHVYAIREAATLNLKKLVEQ--FGSEWAQSTVIPKVVA-MSR 516 (615)
Q Consensus 441 ~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~-d~~~~vR~~a~~~l~~l~~~--~~~~~~~~~i~~~l~~-~~~ 516 (615)
.|.+.++...........-........+...+...+. ...+..-..+..+++.+... ..+... ..++....+ +..
T Consensus 423 ~wk~qea~l~a~~~~~~~~~~dd~l~~l~~~~~~~l~~~e~P~Ll~Ra~~~i~~fs~~~~~~~~~~-~~fl~~~v~~l~~ 501 (1005)
T KOG2274|consen 423 WWKIQEALLVAAESVRIDDANDDKLIELTIMIDNGLVYQESPFLLLRAFLTISKFSSSTVINPQLL-QHFLNATVNALTM 501 (1005)
T ss_pred HHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHhhcccccCHHHHHHHHHHHHHHHhhhccchhHH-HHHHHHHHHhhcc
Confidence 4555555555544443111111122223333333333 22333333677777766665 233322 334444444 456
Q ss_pred CCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhh--hhhHHhhHHHHHhhh--
Q psy14014 517 DQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILE--TNVIQSQVKPALDKL-- 592 (615)
Q Consensus 517 d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~--~~~~~~~~~~~l~~l-- 592 (615)
|..+.+|..|++++...++...-..+.+.++..+.++..+...+|-...+.+|...++.-+ +......+.|....+
T Consensus 502 ~~~~~~ki~a~~~~~~~~~~~vl~~~~p~ild~L~qlas~~s~evl~llmE~Ls~vv~~dpef~as~~skI~P~~i~lF~ 581 (1005)
T KOG2274|consen 502 DVPPPVKISAVRAFCGYCKVKVLLSLQPMILDGLLQLASKSSDEVLVLLMEALSSVVKLDPEFAASMESKICPLTINLFL 581 (1005)
T ss_pred CCCCchhHHHHHHHHhccCceeccccchHHHHHHHHHcccccHHHHHHHHHHHHHHhccChhhhhhhhcchhHHHHHHHH
Confidence 7788899999998887764333334567889999999999999999999999998886533 223455566666554
Q ss_pred cCCCCccHHHHHHHHHHHHh
Q psy14014 593 NGDTDVDVKYFAQEAISSIA 612 (615)
Q Consensus 593 ~~d~d~~v~~~a~~a~~~~~ 612 (615)
...+|+.|-..+.+.++.+-
T Consensus 582 k~s~DP~V~~~~qd~f~el~ 601 (1005)
T KOG2274|consen 582 KYSEDPQVASLAQDLFEELL 601 (1005)
T ss_pred HhcCCchHHHHHHHHHHHHH
Confidence 45666788888888887654
No 74
>PF05804 KAP: Kinesin-associated protein (KAP)
Probab=98.79 E-value=0.00012 Score=77.30 Aligned_cols=372 Identities=15% Similarity=0.194 Sum_probs=219.7
Q ss_pred HHHHHHhhccCchhHHHHHHHHHHHHHhhcChh--hHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCc--cchhh
Q psy14014 208 IPMFVNLAQDEQDSVRLLAVEACVSIASLLSQS--DVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGP--EITKT 283 (615)
Q Consensus 208 l~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~--~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~--~~~~~ 283 (615)
...+..+++.++.-+| .++..|..+++....+ .....+++.|.++++..+..+...++..+.+++..-.+ .+...
T Consensus 252 ~kk~~~l~~kQeqLlr-v~~~lLlNLAed~~ve~kM~~~~iV~~Lv~~Ldr~n~ellil~v~fLkkLSi~~ENK~~m~~~ 330 (708)
T PF05804_consen 252 LKKLQTLIRKQEQLLR-VAFYLLLNLAEDPRVELKMVNKGIVSLLVKCLDRENEELLILAVTFLKKLSIFKENKDEMAES 330 (708)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHhcChHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHHHHHHc
Confidence 3444555555555555 6678888888876543 23445888999999888888888888888777643221 12234
Q ss_pred hHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhc-chh
Q psy14014 284 DLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILG-KHN 362 (615)
Q Consensus 284 ~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g-~~~ 362 (615)
.++|.+.+++..++.+++..+++.|..+.. .++.+.......++|.+..++.+++ .|..+...+..++..-. +..
T Consensus 331 giV~kL~kLl~s~~~~l~~~aLrlL~NLSf--d~~~R~~mV~~GlIPkLv~LL~d~~--~~~val~iLy~LS~dd~~r~~ 406 (708)
T PF05804_consen 331 GIVEKLLKLLPSENEDLVNVALRLLFNLSF--DPELRSQMVSLGLIPKLVELLKDPN--FREVALKILYNLSMDDEARSM 406 (708)
T ss_pred CCHHHHHHHhcCCCHHHHHHHHHHHHHhCc--CHHHHHHHHHCCCcHHHHHHhCCCc--hHHHHHHHHHHhccCHhhHHH
Confidence 789999999999999999999999888765 4444555566678999999998765 45667777777764311 111
Q ss_pred h-hhhhHHHHHHhhcC-CChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHh-hhc
Q psy14014 363 T-VDHLLPLFLSQLKD-ECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVEL-AED 439 (615)
Q Consensus 363 ~-~~~l~p~l~~~l~d-~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~-~~~ 439 (615)
+ ....+|.+.+++.. +++.+...++..+..+... ..-.+. + ...-| + +.+.+. .+.
T Consensus 407 f~~TdcIp~L~~~Ll~~~~~~v~~eliaL~iNLa~~---~rnaql------m---~~g~g-------L--~~L~~ra~~~ 465 (708)
T PF05804_consen 407 FAYTDCIPQLMQMLLENSEEEVQLELIALLINLALN---KRNAQL------M---CEGNG-------L--QSLMKRALKT 465 (708)
T ss_pred HhhcchHHHHHHHHHhCCCccccHHHHHHHHHHhcC---HHHHHH------H---HhcCc-------H--HHHHHHHHhc
Confidence 1 22457777776543 4455555444333322211 100010 0 00000 0 122221 111
Q ss_pred CCchHHHHHHHHhHHHHhhhCh--HhHHHHHHHHHHHhcCC-cchHHHHHHHHHHHHHHHHh--ChHH--hh--hchhHH
Q psy14014 440 SKWRVRLAIIEYMPLLAGQLGV--EFFDEKLNALCMTWLVD-HVYAIREAATLNLKKLVEQF--GSEW--AQ--STVIPK 510 (615)
Q Consensus 440 ~~~~vr~~~~~~l~~l~~~~~~--~~~~~~l~~~l~~~l~d-~~~~vR~~a~~~l~~l~~~~--~~~~--~~--~~i~~~ 510 (615)
.+ ...+..+..++..-|+ ..|.+.+.+ +...+.. .+. +..+.++|.++..- +.+| .. ..++|.
T Consensus 466 ~D----~lLlKlIRNiS~h~~~~k~~f~~~i~~-L~~~v~~~~~e---e~~vE~LGiLaNL~~~~ld~~~ll~~~~llp~ 537 (708)
T PF05804_consen 466 RD----PLLLKLIRNISQHDGPLKELFVDFIGD-LAKIVSSGDSE---EFVVECLGILANLTIPDLDWAQLLQEYNLLPW 537 (708)
T ss_pred cc----HHHHHHHHHHHhcCchHHHHHHHHHHH-HHHHhhcCCcH---HHHHHHHHHHHhcccCCcCHHHHHHhCCHHHH
Confidence 11 1233444455444332 113333333 2333433 233 45566666665532 2222 11 358899
Q ss_pred HHhhhcCC--CchHHHHHHHHHHHHHhhhC--hhhHHHhhHHHHHhhCCC--CCchHHHHHHHHHHHHhHhhhhhh---H
Q psy14014 511 VVAMSRDQ--NYLHRMTCLFCINVLAEACG--PTVTANFLLPTVLNMAGD--NVANVRFNVAKTLQKIGPILETNV---I 581 (615)
Q Consensus 511 l~~~~~d~--~~~~R~~a~~~l~~l~~~~~--~~~~~~~i~~~l~~~~~D--~~~~vr~~a~~~l~~l~~~~~~~~---~ 581 (615)
+.+.+..+ .+.+...++..+|.++..-. .-.....+.+.+..+++. .|.+.....+.++.++..+-.+.. .
T Consensus 538 L~~~L~~g~~~dDl~LE~Vi~~gtla~d~~~A~lL~~sgli~~Li~LL~~kqeDdE~VlQil~~f~~ll~h~~tr~~ll~ 617 (708)
T PF05804_consen 538 LKDLLKPGASEDDLLLEVVILLGTLASDPECAPLLAKSGLIPTLIELLNAKQEDDEIVLQILYVFYQLLFHEETREVLLK 617 (708)
T ss_pred HHHHhCCCCCChHHHHHHHHHHHHHHCCHHHHHHHHhCChHHHHHHHHHhhCchHHHHHHHHHHHHHHHcChHHHHHHHh
Confidence 98887654 44567788888888774211 111234567777776643 356666778888888876543322 1
Q ss_pred HhhHHHHHhhhcCCCCccHHHHHHHHHHHHhh
Q psy14014 582 QSQVKPALDKLNGDTDVDVKYFAQEAISSIAD 613 (615)
Q Consensus 582 ~~~~~~~l~~l~~d~d~~v~~~a~~a~~~~~~ 613 (615)
...+..-+..|.+|++.+||..|-.++..+++
T Consensus 618 ~~~~~~ylidL~~d~N~~ir~~~d~~Ldii~e 649 (708)
T PF05804_consen 618 ETEIPAYLIDLMHDKNAEIRKVCDNALDIIAE 649 (708)
T ss_pred ccchHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 34567777888999999999999999999886
No 75
>KOG1058|consensus
Probab=98.77 E-value=3.9e-05 Score=77.86 Aligned_cols=328 Identities=13% Similarity=0.138 Sum_probs=182.7
Q ss_pred ChhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHh-hccCchhHHHHHHHHHHHHHhhcCh
Q psy14014 161 TAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNL-AQDEQDSVRLLAVEACVSIASLLSQ 239 (615)
Q Consensus 161 ~~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~-~~d~~~~vr~~a~~~l~~l~~~~~~ 239 (615)
.++..+.++|.+.+.+.+....||+.|.-++..+.+.... ..++.-.++..+ ..+.++..++.|.-.|-.. .+
T Consensus 128 E~ELlepl~p~IracleHrhsYVRrNAilaifsIyk~~~~--L~pDapeLi~~fL~~e~DpsCkRNAFi~L~~~----D~ 201 (948)
T KOG1058|consen 128 EPELLEPLMPSIRACLEHRHSYVRRNAILAIFSIYKNFEH--LIPDAPELIESFLLTEQDPSCKRNAFLMLFTT----DP 201 (948)
T ss_pred cHHHhhhhHHHHHHHHhCcchhhhhhhheeehhHHhhhhh--hcCChHHHHHHHHHhccCchhHHHHHHHHHhc----CH
Confidence 3456677889999999999999999999999998876332 112222222222 2466777777766554432 11
Q ss_pred hhHHHhHHHHHHHhcCC-CC--hHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhcc
Q psy14014 240 SDVEQLVMPTLRQCSGD-TS--WRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLD 316 (615)
Q Consensus 240 ~~~~~~l~~~l~~~~~d-~~--~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~ 316 (615)
+. .+.++...+.+ ++ ........+.+...+.. ........+..+..++..+++.|+-.|+.++..+...
T Consensus 202 Er----Al~Yl~~~idqi~~~~~~LqlViVE~Irkv~~~--~p~~~~~~i~~i~~lL~stssaV~fEaa~tlv~lS~~-- 273 (948)
T KOG1058|consen 202 ER----ALNYLLSNIDQIPSFNDSLQLVIVELIRKVCLA--NPAEKARYIRCIYNLLSSTSSAVIFEAAGTLVTLSND-- 273 (948)
T ss_pred HH----HHHHHHhhHhhccCccHHHHHHHHHHHHHHHhc--CHHHhhHHHHHHHHHHhcCCchhhhhhcceEEEccCC--
Confidence 11 22222222211 11 22333333333333321 1111235666677777777777777666665544321
Q ss_pred ccchhHHHHHhhHHHHHHhh-CCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhh
Q psy14014 317 AYNQENIIMTYILPYVKDLV-ADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNE 395 (615)
Q Consensus 317 ~~~~~~~~~~~l~p~l~~~~-~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~ 395 (615)
+ ..+......+.+++ ..++-.++.....-|..+. .+.+...+.+.--++..+..++-+||..++...-.++.
T Consensus 274 p-----~alk~Aa~~~i~l~~kesdnnvklIvldrl~~l~--~~~~~il~~l~mDvLrvLss~dldvr~Ktldi~ldLvs 346 (948)
T KOG1058|consen 274 P-----TALKAAASTYIDLLVKESDNNVKLIVLDRLSELK--ALHEKILQGLIMDVLRVLSSPDLDVRSKTLDIALDLVS 346 (948)
T ss_pred H-----HHHHHHHHHHHHHHHhccCcchhhhhHHHHHHHh--hhhHHHHHHHHHHHHHHcCcccccHHHHHHHHHHhhhh
Confidence 0 11122222222322 2334455555555555444 22344455566667788888889999998875444433
Q ss_pred hhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHH---HhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHH
Q psy14014 396 VIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIV---ELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALC 472 (615)
Q Consensus 396 ~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~---~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l 472 (615)
.-...++. +++ . ..+. ..-++.+.+.|+..++.+...+..+.. +...++|.+
T Consensus 347 srNvediv------~~L---k--------------ke~~kT~~~e~d~~~~yRqlLiktih~cav~Fp~--~aatvV~~l 401 (948)
T KOG1058|consen 347 SRNVEDIV------QFL---K--------------KEVMKTHNEESDDNGKYRQLLIKTIHACAVKFPE--VAATVVSLL 401 (948)
T ss_pred hccHHHHH------HHH---H--------------HHHHhccccccccchHHHHHHHHHHHHHhhcChH--HHHHHHHHH
Confidence 22211111 111 0 1111 112466788999999999998877765 467899999
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhh-cCCCchHHHHHHHHHHHHHhh
Q psy14014 473 MTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMS-RDQNYLHRMTCLFCINVLAEA 536 (615)
Q Consensus 473 ~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~-~d~~~~~R~~a~~~l~~l~~~ 536 (615)
++++.|.+..--...+..+......+.. ....++..++..+ .=++...-..+++.+|.-++.
T Consensus 402 l~fisD~N~~aas~vl~FvrE~iek~p~--Lr~~ii~~l~~~~~~irS~ki~rgalwi~GeYce~ 464 (948)
T KOG1058|consen 402 LDFISDSNEAAASDVLMFVREAIEKFPN--LRASIIEKLLETFPQIRSSKICRGALWILGEYCEG 464 (948)
T ss_pred HHHhccCCHHHHHHHHHHHHHHHHhCch--HHHHHHHHHHHhhhhhcccccchhHHHHHHHHHhh
Confidence 9999999987766666766666665542 2233555554432 334555556677777766554
No 76
>KOG1992|consensus
Probab=98.76 E-value=0.00042 Score=71.50 Aligned_cols=274 Identities=16% Similarity=0.135 Sum_probs=142.9
Q ss_pred CcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchh--------hcchhhhhhh
Q psy14014 296 SEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPI--------LGKHNTVDHL 367 (615)
Q Consensus 296 ~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~--------~g~~~~~~~l 367 (615)
++|-++..+++-+..+=..+++ .+.-.++|.+...+..++.-|..-++.++..+..+ +|.+...+.+
T Consensus 472 ~~pilka~aIKy~~~FR~ql~~-----~~lm~~~p~li~~L~a~s~vvhsYAA~aiEkil~vre~~~~~if~~~~iap~~ 546 (960)
T KOG1992|consen 472 EFPILKADAIKYIYTFRNQLGK-----EHLMALLPRLIRFLEAESRVVHSYAAIAIEKLLTVRENSNAKIFGAEDIAPFV 546 (960)
T ss_pred cccchhhcccceeeeecccCCh-----HHHHHHHHHHHHhccCcchHHHHHHHHHHHhccccccCccccccchhhcchHH
Confidence 3444555555444444433333 34556788888888988888888888888777543 3334344444
Q ss_pred HHHHHHhhc---C----CChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcC
Q psy14014 368 LPLFLSQLK---D----ECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDS 440 (615)
Q Consensus 368 ~p~l~~~l~---d----~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~ 440 (615)
.+.+.++.+ - +++-+-....+.+. ...+ +++.+.|.+...+ . ..+.+..+++
T Consensus 547 ~~ll~nLf~a~s~p~~~EneylmKaImRii~----i~~~-------~i~p~~~~~l~~L---------t-eiv~~v~KNP 605 (960)
T KOG1992|consen 547 EILLTNLFKALSLPGKAENEYLMKAIMRIIS----ILQS-------AIIPHAPELLRQL---------T-EIVEEVSKNP 605 (960)
T ss_pred HHHHHHHHHhccCCcccccHHHHHHHHHHHH----hCHH-------hhhhhhhHHHHHH---------H-HHHHHHhcCC
Confidence 444444441 1 12222222222221 1111 1112222222111 0 2233334443
Q ss_pred -CchHHHHHHHHhHHHHhhhChHh------HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHh
Q psy14014 441 -KWRVRLAIIEYMPLLAGQLGVEF------FDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVA 513 (615)
Q Consensus 441 -~~~vr~~~~~~l~~l~~~~~~~~------~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~ 513 (615)
+++.-.-..+.++.+....+..- +...++|.+...+..+..+.=-.+...++.++...+.. ..+.+.|. ..
T Consensus 606 s~P~fnHYLFEsi~~li~~t~~~~~~~vs~~e~aL~p~fq~Il~eDI~EfiPYvfQlla~lve~~~~~-ip~~~~~l-~~ 683 (960)
T KOG1992|consen 606 SNPQFNHYLFESIGLLIRKTCKANPSAVSSLEEALFPVFQTILSEDIQEFIPYVFQLLAVLVEHSSGT-IPDSYSPL-FP 683 (960)
T ss_pred CCchhHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CchhHHHH-HH
Confidence 56666667777777766554322 56778887777777777777788888999998877541 22222222 22
Q ss_pred hhcCCCchHHHHH----HHHHHHHHhhhChhh----HHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhh----H
Q psy14014 514 MSRDQNYLHRMTC----LFCINVLAEACGPTV----TANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNV----I 581 (615)
Q Consensus 514 ~~~d~~~~~R~~a----~~~l~~l~~~~~~~~----~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~----~ 581 (615)
.+-.++-+.|..- ++.+..+.+..+..+ ....++-++.++...+..+. .....|..+++.+++.. +
T Consensus 684 ~lLsp~lW~r~gNipalvrLl~aflk~g~~~~~~~~~l~~iLGifqkLiaSka~Dh--~GF~LLn~i~~~~~~~~~~py~ 761 (960)
T KOG1992|consen 684 PLLSPNLWKRSGNIPALVRLLQAFLKTGSQIVEAADKLSGILGIFQKLIASKANDH--HGFYLLNTIIESIPPNELAPYM 761 (960)
T ss_pred HhcCHHHHhhcCCcHHHHHHHHHHHhcCchhhcccccchhHHHHHHHHhcCcccch--hHHHHHHHHHhcCCHhhhhHHH
Confidence 2233333334322 223333333322222 23567788888877666555 45667777777776543 3
Q ss_pred HhhHHHHHhhhcCCCCcc
Q psy14014 582 QSQVKPALDKLNGDTDVD 599 (615)
Q Consensus 582 ~~~~~~~l~~l~~d~d~~ 599 (615)
......+++++.+.+-+.
T Consensus 762 k~i~~llf~RlqnskT~k 779 (960)
T KOG1992|consen 762 KQIFGLLFQRLQNSKTEK 779 (960)
T ss_pred HHHHHHHHHHHhccCcHH
Confidence 334444555565555433
No 77
>KOG1078|consensus
Probab=98.75 E-value=0.00014 Score=74.42 Aligned_cols=481 Identities=16% Similarity=0.145 Sum_probs=246.3
Q ss_pred HHHhcHHHHHHHhCcc-----hhhccchhhhhhhcCCcHH-HHHHHHHHhccccCCCCCcchhhhchHHHhhhhcCchhH
Q psy14014 32 NSIKKLSTIALALGQE-----RTRGELIPFLTETIYDEDE-VLLALAEQLGTFTPNVGGPEYVHCLLPPLESLATVEETV 105 (615)
Q Consensus 32 ~a~~~l~~~~~~~~~~-----~~~~~ll~~l~~~~~~~~~-vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~l~~~~~~~ 105 (615)
.+.+.|.++..-+... ....++.=-+..+....+. .|+..-..++.+.... ++. -.....+..-....++.
T Consensus 39 ~c~~~lskllyll~qge~~~~~eate~ff~~tKlfQskd~~LRr~vYl~Ikels~is--edv-iivtsslmkD~t~~~d~ 115 (865)
T KOG1078|consen 39 KCRHILSKLLYLLNQGEHFGETEATELFFAITKLFQSKDVSLRRMVYLAIKELSKIS--EDV-IIVTSSLMKDMTGKEDL 115 (865)
T ss_pred HHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhhcCHHHHHHHHHHHhhccccc--hhh-hhhhHHHHhhccCCCcc
Confidence 5666666664332221 1222332234456666664 8887777776665421 111 11222233334556778
Q ss_pred HHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHHHHHhCCCChHHHH
Q psy14014 106 VRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQDDTPMVRR 185 (615)
Q Consensus 106 vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~~l~~d~~~~vR~ 185 (615)
.|-.|+.+|+.+...---..++. ++.+..-+....++.+|.-.--.++ ..+......+.+.......+.+-.+++
T Consensus 116 yr~~AiR~L~~I~d~~m~~~ier----y~kqaivd~~~avSsaalvss~hll-~~~~~~vkrw~neiqea~~s~~~m~Qy 190 (865)
T KOG1078|consen 116 YRAAAIRALCSIIDGTMLQAIER----YMKQAIVDKNPAVSSAALVSSYHLL-PISFDVVKRWANEVQEAVNSDNIMVQY 190 (865)
T ss_pred hhHHHHHHHHhhcCcchhHHHHH----HHHhHeeccccccchHHHHHHhhhh-cccHHHHHHHHHhhhhccCcHHHHHHH
Confidence 88888888877654322222222 3333334444434333321111111 122333333333333333333445555
Q ss_pred HHHHhHHHHHHHhchhhhHhhhHHHHHH-hhccCchhHHHHHHHHHHHHHhhcCh-hhHHHhHHHHHHHhcCCCChHHHH
Q psy14014 186 AAAGKLGELAKVVEVDYLKTDIIPMFVN-LAQDEQDSVRLLAVEACVSIASLLSQ-SDVEQLVMPTLRQCSGDTSWRVRY 263 (615)
Q Consensus 186 ~a~~~l~~l~~~~~~~~~~~~ll~~l~~-~~~d~~~~vr~~a~~~l~~l~~~~~~-~~~~~~l~~~l~~~~~d~~~~vR~ 263 (615)
.+...+..+-+.. ......++..+.. .++++- -+..-+.. .++.+.. ......+.|.+..++.+...-|-.
T Consensus 191 HalglLyqirk~d--rla~sklv~~~~~~~~~~~~--A~~~lir~---~~~~l~~~~~~~s~~~~fl~s~l~~K~emV~~ 263 (865)
T KOG1078|consen 191 HALGLLYQIRKND--RLAVSKLVQKFTRGSLKSPL--AVCMLIRI---ASELLKENQQADSPLFPFLESCLRHKSEMVIY 263 (865)
T ss_pred HHHHHHHHHHhhh--HHHHHHHHHHHccccccchh--HHHHHHHH---HHHHhhhcccchhhHHHHHHHHHhchhHHHHH
Confidence 5554444442211 1112223322222 011111 01000111 1111111 112345788888888888888888
Q ss_pred HHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHH
Q psy14014 264 MVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHV 343 (615)
Q Consensus 264 ~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~v 343 (615)
-++..+..+....+.+.. ..+..+..+++.+.+.+|-+|.+.|.+++...+.. ....-+-+..+++|.+-.+
T Consensus 264 EaArai~~l~~~~~r~l~--pavs~Lq~flssp~~~lRfaAvRtLnkvAm~~P~~------v~~cN~elE~lItd~NrsI 335 (865)
T KOG1078|consen 264 EAARAIVSLPNTNSRELA--PAVSVLQLFLSSPKVALRFAAVRTLNKVAMKHPQA------VTVCNLDLESLITDSNRSI 335 (865)
T ss_pred HHHHHHhhccccCHhhcc--hHHHHHHHHhcCcHHHHHHHHHHHHHHHHHhCCcc------ccccchhHHhhhcccccch
Confidence 888877776655544432 26677888899999999999999999988765422 2223345666778777655
Q ss_pred HHHHHHHHHhhchhhcchhhhhhhHHHH---HHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccc
Q psy14014 344 KSALASVIMGLSPILGKHNTVDHLLPLF---LSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLG 420 (615)
Q Consensus 344 R~~~~~~l~~l~~~~g~~~~~~~l~p~l---~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~ 420 (615)
-.-+.-.+-. .|.+...+.++..+ ..-+.|+..-|...|+++|+... .. .|. .++.
T Consensus 336 at~AITtLLK----TG~e~sv~rLm~qI~~fv~disDeFKivvvdai~sLc~~f---p~-k~~---~~m~---------- 394 (865)
T KOG1078|consen 336 ATLAITTLLK----TGTESSVDRLMKQISSFVSDISDEFKIVVVDAIRSLCLKF---PR-KHT---VMMN---------- 394 (865)
T ss_pred hHHHHHHHHH----hcchhHHHHHHHHHHHHHHhccccceEEeHHHHHHHHhhc---cH-HHH---HHHH----------
Confidence 4444333322 24444444444444 44445555566667776665432 11 111 1111
Q ss_pred cchhhhhhhhHHHHHhh-hcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhC
Q psy14014 421 VEFFDEKLNALSIVELA-EDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFG 499 (615)
Q Consensus 421 ~~~~~~~l~~~~i~~~~-~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~ 499 (615)
.+..++ ++.....+.+.++++..++...... .+..+..+..++.|. +.+.-+...+..+.+...
T Consensus 395 -----------FL~~~Lr~eGg~e~K~aivd~Ii~iie~~pds--Ke~~L~~LCefIEDc--e~~~i~~rILhlLG~EgP 459 (865)
T KOG1078|consen 395 -----------FLSNMLREEGGFEFKRAIVDAIIDIIEENPDS--KERGLEHLCEFIEDC--EFTQIAVRILHLLGKEGP 459 (865)
T ss_pred -----------HHHHHHHhccCchHHHHHHHHHHHHHHhCcch--hhHHHHHHHHHHHhc--cchHHHHHHHHHHhccCC
Confidence 222222 2455666777777776665522111 112222333333332 234556666666655432
Q ss_pred hHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHh
Q psy14014 500 SEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIG 573 (615)
Q Consensus 500 ~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~ 573 (615)
........+..+.+..-=.|..+|.+|..++..++ .+.....+.+.-.+.+++.|.|..||..|.-.+..+-
T Consensus 460 ~a~~Pskyir~iyNRviLEn~ivRaaAv~alaKfg--~~~~~l~~sI~vllkRc~~D~DdevRdrAtf~l~~l~ 531 (865)
T KOG1078|consen 460 KAPNPSKYIRFIYNRVILENAIVRAAAVSALAKFG--AQDVVLLPSILVLLKRCLNDSDDEVRDRATFYLKNLE 531 (865)
T ss_pred CCCCcchhhHHHhhhhhhhhhhhHHHHHHHHHHHh--cCCCCccccHHHHHHHHhcCchHHHHHHHHHHHHHhh
Confidence 11112234444555455567788999999998887 3333445567777888889999999998888887775
No 78
>KOG1820|consensus
Probab=98.74 E-value=2.5e-06 Score=90.45 Aligned_cols=345 Identities=13% Similarity=0.148 Sum_probs=212.2
Q ss_pred hhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccch-hhh
Q psy14014 206 DIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEIT-KTD 284 (615)
Q Consensus 206 ~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~-~~~ 284 (615)
.+++.....+.......|....+++..+...-. ....+..+..+..-.++..-.+++..+..+..-+|.... ...
T Consensus 63 ~l~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~----~~~~~e~~~~~~~~k~pk~~~~~~~~~~~lv~~~g~p~~~~~~ 138 (815)
T KOG1820|consen 63 QLLSFGLKCLDSKRVNIRDTKTQSLLRIGKLED----IKEVVEAAKALLSFKSPKKIAAAVAAVLSLVEEFGKPKVPSKA 138 (815)
T ss_pred eeccchhhhcccccccccCcchhHHHHHHHhhh----hHHHHHHHHhhccccCchhHHHHHHHHHHHHHHhcCCCCcccc
Confidence 345555555555555666666666666522211 223444444455555555555566666666655554322 122
Q ss_pred HHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHH---HhhHHHH-------------------HHh---hCCC
Q psy14014 285 LVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIM---TYILPYV-------------------KDL---VADP 339 (615)
Q Consensus 285 l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~---~~l~p~l-------------------~~~---~~d~ 339 (615)
+++.+-.+. +..||..+...+..+....+.......+. ..++--+ ... ..++
T Consensus 139 ~~~~~~~l~---D~nvr~~~~~l~v~i~r~~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (815)
T KOG1820|consen 139 FIKHVGSLA---DKNVRSEASKLLVEIYRWTGDASKPLLFKASAPGLMGKLGSYQGKSMMSFFNEKRPLLKSQPQDESDP 215 (815)
T ss_pred ccccCcccc---ccccchhhcccchhhhhhcCCCcCcccchhhhHHHHHHHHhhccccccccccccccccccccccccCC
Confidence 333333333 55678888888888776655432210000 0000000 001 1223
Q ss_pred CHHHHHHHHHHHHhhchh-----------hcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHH
Q psy14014 340 NQHVKSALASVIMGLSPI-----------LGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAI 408 (615)
Q Consensus 340 ~~~vR~~~~~~l~~l~~~-----------~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i 408 (615)
++.-+...-......... +........+-|.+...+.+.+|.-|..+++.+-..++..+ ..
T Consensus 216 n~~e~~~~~~~~~~~~~~~~~s~~d~~d~l~~~di~~ki~~~l~t~~~s~~WK~R~Eale~l~~~l~e~~-~~------- 287 (815)
T KOG1820|consen 216 NVKEQLEKPERGLQRSKSGFTSPIDNFDLLPRVDILSKITKNLETEMLSKKWKDRKEALEELVAILEEAK-KE------- 287 (815)
T ss_pred ChhhcccccccccccccCCCCCCccccccCchhhhhhhcChHHHHhhhccchHHHHHHHHHHHHHHhccc-cc-------
Confidence 333322211111111110 11122344566777777778888888888776655443322 00
Q ss_pred HhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHh--HHHHHHHHHHHhcCCcchHHHHH
Q psy14014 409 IEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEF--FDEKLNALCMTWLVDHVYAIREA 486 (615)
Q Consensus 409 ~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l~d~~~~vR~~ 486 (615)
....+.+.+. ..+.....|.|..+-..++..|..++..++..+ +...+.|.++..+.+....+|.+
T Consensus 288 -----------~~~~~~~ll~-~~~ki~~kDaN~~v~~~aa~~l~~ia~~lr~~~~~~~~~v~p~lld~lkekk~~l~d~ 355 (815)
T KOG1820|consen 288 -----------IVKGYTGLLG-ILLKIRLKDANINVVMLAAQILELIAKKLRPLFRKYAKNVFPSLLDRLKEKKSELRDA 355 (815)
T ss_pred -----------cccCcchHHH-HHHHHhccCcchhHHHHHHHHHHHHHHhcchhhHHHHHhhcchHHHHhhhccHHHHHH
Confidence 0011111111 234445678999999999999999999988764 44668899999999999999999
Q ss_pred HHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhCh----hhHHHhhHHHHHhhCCCCCchHH
Q psy14014 487 ATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGP----TVTANFLLPTVLNMAGDNVANVR 562 (615)
Q Consensus 487 a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~----~~~~~~i~~~l~~~~~D~~~~vr 562 (615)
+..++..++...+ ...+.+.+..++++.+|..|..+...+.......++ ..-...+.|.+....+|.+.+||
T Consensus 356 l~~~~d~~~ns~~----l~~~~~~I~e~lk~knp~~k~~~~~~l~r~~~~~~~~~~~~~t~~~l~p~~~~~~~D~~~~VR 431 (815)
T KOG1820|consen 356 LLKALDAILNSTP----LSKMSEAILEALKGKNPQIKGECLLLLDRKLRKLGPKTVEKETVKTLVPHLIKHINDTDKDVR 431 (815)
T ss_pred HHHHHHHHHhccc----HHHHHHHHHHHhcCCChhhHHHHHHHHHHHHhhcCCcCcchhhHHHHhHHHhhhccCCcHHHH
Confidence 9999999887433 346888999999999999999999999998887763 22246789999999999999999
Q ss_pred HHHHHHHHHHhHhhhhhhH
Q psy14014 563 FNVAKTLQKIGPILETNVI 581 (615)
Q Consensus 563 ~~a~~~l~~l~~~~~~~~~ 581 (615)
.++..+++.+...+|...+
T Consensus 432 ~Aa~e~~~~v~k~~Ge~~~ 450 (815)
T KOG1820|consen 432 KAALEAVAAVMKVHGEEVF 450 (815)
T ss_pred HHHHHHHHHHHHHhhHHHH
Confidence 9999999999988875443
No 79
>KOG1078|consensus
Probab=98.69 E-value=9e-05 Score=75.83 Aligned_cols=428 Identities=15% Similarity=0.142 Sum_probs=229.7
Q ss_pred CChhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhcc---CchhHHHHHHHHHHHHHhh
Q psy14014 160 VTAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQD---EQDSVRLLAVEACVSIASL 236 (615)
Q Consensus 160 ~~~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d---~~~~vr~~a~~~l~~l~~~ 236 (615)
+++..-.+++=.+.++.++.+...|+.+-.++.+++.... +.+-...++.+| .++.+|..|+.+|-.+
T Consensus 57 ~~~~eate~ff~~tKlfQskd~~LRr~vYl~Ikels~ise------dviivtsslmkD~t~~~d~yr~~AiR~L~~I--- 127 (865)
T KOG1078|consen 57 FGETEATELFFAITKLFQSKDVSLRRMVYLAIKELSKISE------DVIIVTSSLMKDMTGKEDLYRAAAIRALCSI--- 127 (865)
T ss_pred cchhhHHHHHHHHHHHHhhcCHHHHHHHHHHHhhccccch------hhhhhhHHHHhhccCCCcchhHHHHHHHHhh---
Confidence 3444445566666888999999999999998888876432 233333444444 4567787777766554
Q ss_pred cChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHH-------HhCccc-----hhh-----hHHHHHHHhhcCCcHH
Q psy14014 237 LSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQK-------AVGPEI-----TKT-----DLVQAFQMLLKDSEAE 299 (615)
Q Consensus 237 ~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~-------~~~~~~-----~~~-----~l~~~l~~~l~d~~~~ 299 (615)
++.. ....+-.++.+.+-|++.-++.++.-.=..+.. .+.++. ..+ +.+..+.+ +.+ .
T Consensus 128 ~d~~-m~~~iery~kqaivd~~~avSsaalvss~hll~~~~~~vkrw~neiqea~~s~~~m~QyHalglLyq-irk---~ 202 (865)
T KOG1078|consen 128 IDGT-MLQAIERYMKQAIVDKNPAVSSAALVSSYHLLPISFDVVKRWANEVQEAVNSDNIMVQYHALGLLYQ-IRK---N 202 (865)
T ss_pred cCcc-hhHHHHHHHHhHeeccccccchHHHHHHhhhhcccHHHHHHHHHhhhhccCcHHHHHHHHHHHHHHH-HHh---h
Confidence 3322 133355566666666666555544322111111 000000 000 11111111 111 1
Q ss_pred HHHHHHHHHHHHHhhccccch---------------hHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhh
Q psy14014 300 VRAAAANKVRDFCQNLDAYNQ---------------ENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTV 364 (615)
Q Consensus 300 vr~~a~~~l~~~~~~~~~~~~---------------~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~ 364 (615)
.|.+..+.+..+......... .......++|.+...+.+....|-..++.++..+....+.+..
T Consensus 203 drla~sklv~~~~~~~~~~~~A~~~lir~~~~~l~~~~~~~s~~~~fl~s~l~~K~emV~~EaArai~~l~~~~~r~l~- 281 (865)
T KOG1078|consen 203 DRLAVSKLVQKFTRGSLKSPLAVCMLIRIASELLKENQQADSPLFPFLESCLRHKSEMVIYEAARAIVSLPNTNSRELA- 281 (865)
T ss_pred hHHHHHHHHHHHccccccchhHHHHHHHHHHHHhhhcccchhhHHHHHHHHHhchhHHHHHHHHHHHhhccccCHhhcc-
Confidence 122222222222221100000 0112345677777888888888888888888877655443211
Q ss_pred hhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhh-----------hhhhhccccchhhhhhhhHHH
Q psy14014 365 DHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYM-----------PLLAGQLGVEFFDEKLNALSI 433 (615)
Q Consensus 365 ~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l-----------~~l~~~~~~~~~~~~l~~~~i 433 (615)
.-+..+..+++......|.+|.+.|..+.......-......+...+ +...-+.|.+--.+.|. ..+
T Consensus 282 -pavs~Lq~flssp~~~lRfaAvRtLnkvAm~~P~~v~~cN~elE~lItd~NrsIat~AITtLLKTG~e~sv~rLm-~qI 359 (865)
T KOG1078|consen 282 -PAVSVLQLFLSSPKVALRFAAVRTLNKVAMKHPQAVTVCNLDLESLITDSNRSIATLAITTLLKTGTESSVDRLM-KQI 359 (865)
T ss_pred -hHHHHHHHHhcCcHHHHHHHHHHHHHHHHHhCCccccccchhHHhhhcccccchhHHHHHHHHHhcchhHHHHHH-HHH
Confidence 13445566777777889999999998876543221100000000000 00001112222222222 133
Q ss_pred HHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHH
Q psy14014 434 VELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLV-DHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVV 512 (615)
Q Consensus 434 ~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~-d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~ 512 (615)
..+.+|-+...+-..++++..++..+... ...+++.+.++|. +...+-+.+.+.++..++..... ..+..+..|-
T Consensus 360 ~~fv~disDeFKivvvdai~sLc~~fp~k--~~~~m~FL~~~Lr~eGg~e~K~aivd~Ii~iie~~pd--sKe~~L~~LC 435 (865)
T KOG1078|consen 360 SSFVSDISDEFKIVVVDAIRSLCLKFPRK--HTVMMNFLSNMLREEGGFEFKRAIVDAIIDIIEENPD--SKERGLEHLC 435 (865)
T ss_pred HHHHHhccccceEEeHHHHHHHHhhccHH--HHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHhCcc--hhhHHHHHHH
Confidence 33333333333344555555555555543 2345566666554 44567778888888777764332 2234556666
Q ss_pred hhhcCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHHHHhhh
Q psy14014 513 AMSRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKL 592 (615)
Q Consensus 513 ~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~l 592 (615)
.+..|... +.-+.+.++.+++.++.....+...-.+.+..-=.+..||.+|..+|..+. .+.....+.+..++++-
T Consensus 436 efIEDce~--~~i~~rILhlLG~EgP~a~~Pskyir~iyNRviLEn~ivRaaAv~alaKfg--~~~~~l~~sI~vllkRc 511 (865)
T KOG1078|consen 436 EFIEDCEF--TQIAVRILHLLGKEGPKAPNPSKYIRFIYNRVILENAIVRAAAVSALAKFG--AQDVVLLPSILVLLKRC 511 (865)
T ss_pred HHHHhccc--hHHHHHHHHHHhccCCCCCCcchhhHHHhhhhhhhhhhhHHHHHHHHHHHh--cCCCCccccHHHHHHHH
Confidence 66666554 455666667666554332211111122222222236789999999999998 34456677889999998
Q ss_pred cCCCCccHHHHHHHHHHHHh
Q psy14014 593 NGDTDVDVKYFAQEAISSIA 612 (615)
Q Consensus 593 ~~d~d~~v~~~a~~a~~~~~ 612 (615)
+.|+|.+||..|..+++.+.
T Consensus 512 ~~D~DdevRdrAtf~l~~l~ 531 (865)
T KOG1078|consen 512 LNDSDDEVRDRATFYLKNLE 531 (865)
T ss_pred hcCchHHHHHHHHHHHHHhh
Confidence 99999999999999998875
No 80
>KOG2062|consensus
Probab=98.66 E-value=2.6e-05 Score=78.93 Aligned_cols=156 Identities=18% Similarity=0.122 Sum_probs=109.9
Q ss_pred HHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHh-cCCcchHHHHHHHHHHHHHHHHhChHHhhhchhH
Q psy14014 431 LSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTW-LVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIP 509 (615)
Q Consensus 431 ~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~-l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~ 509 (615)
|.|.+++.|.++-+|...+-.+..--...|.. ..+..++.. .+|.+..||.+|+.++|-++-. -....|
T Consensus 522 ~lI~el~~dkdpilR~~Gm~t~alAy~GTgnn----kair~lLh~aVsD~nDDVrRaAVialGFVl~~------dp~~~~ 591 (929)
T KOG2062|consen 522 PLIKELLRDKDPILRYGGMYTLALAYVGTGNN----KAIRRLLHVAVSDVNDDVRRAAVIALGFVLFR------DPEQLP 591 (929)
T ss_pred HHHHHHhcCCchhhhhhhHHHHHHHHhccCch----hhHHHhhcccccccchHHHHHHHHHheeeEec------Chhhch
Confidence 67888899999999988777665443334443 233334443 7899999999999998877532 124566
Q ss_pred HHHhhh-cCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhh--hHHhhHH
Q psy14014 510 KVVAMS-RDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETN--VIQSQVK 586 (615)
Q Consensus 510 ~l~~~~-~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~--~~~~~~~ 586 (615)
....++ ++-|+.||..++.++|..+-.-|... ....|..+..|++.-||+.|+-+++-|.-+..+. .-...+.
T Consensus 592 s~V~lLses~N~HVRyGaA~ALGIaCAGtG~~e----Ai~lLepl~~D~~~fVRQgAlIa~amIm~Q~t~~~~pkv~~fr 667 (929)
T KOG2062|consen 592 STVSLLSESYNPHVRYGAAMALGIACAGTGLKE----AINLLEPLTSDPVDFVRQGALIALAMIMIQQTEQLCPKVNGFR 667 (929)
T ss_pred HHHHHHhhhcChhhhhhHHHHHhhhhcCCCcHH----HHHHHhhhhcChHHHHHHHHHHHHHHHHHhcccccCchHHHHH
Confidence 666655 45699999999999999876555433 5666777788999999999999999887655421 1123455
Q ss_pred HHHhhhcCCCCccH
Q psy14014 587 PALDKLNGDTDVDV 600 (615)
Q Consensus 587 ~~l~~l~~d~d~~v 600 (615)
.-+.+..+|+.+++
T Consensus 668 k~l~kvI~dKhEd~ 681 (929)
T KOG2062|consen 668 KQLEKVINDKHEDG 681 (929)
T ss_pred HHHHHHhhhhhhHH
Confidence 55555667776664
No 81
>KOG0413|consensus
Probab=98.66 E-value=0.00052 Score=71.79 Aligned_cols=475 Identities=13% Similarity=0.035 Sum_probs=250.3
Q ss_pred HHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhc----------
Q psy14014 130 FVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVE---------- 199 (615)
Q Consensus 130 ~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~---------- 199 (615)
+..++..-+-|.-..+|..|...+..+....+...-..|+..+..-+.|+-..+++.....+..-.....
T Consensus 473 ~~~~~~~rClDkaaavR~~al~s~tk~l~l~~~~~~~sIl~~~inS~~d~~fs~ves~~~~~~~~~~~~s~~~~tt~~l~ 552 (1529)
T KOG0413|consen 473 LYNIVYMRCLDKAAAVRLHALNSLTKILQLQSHREAFSILCATINSEMDEKFSAVESLEDLNVSGKAPSSKTKKTTDLLL 552 (1529)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccchHHHHHHhcCCccccchhHHHhchhhhhcccCcccccccchhhcC
Confidence 4445555556666778888877776665554444445566666666666667777665554332111100
Q ss_pred -----------------hhhhHhhhHHHHHHhhc-cCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHH
Q psy14014 200 -----------------VDYLKTDIIPMFVNLAQ-DEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRV 261 (615)
Q Consensus 200 -----------------~~~~~~~ll~~l~~~~~-d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~v 261 (615)
...+...++-++...++ |+...||+.|...+.....+...+...+..+-++..++.|+-..|
T Consensus 553 ~~~~ii~d~~~~~~~~ge~~~e~~V~~mi~Rr~~~d~k~~v~k~a~~~l~S~l~~cD~~~~fe~~L~iLq~lCrd~~vsv 632 (1529)
T KOG0413|consen 553 DEQQIIQDFKLKLMNKGETRVEKDVVYMIVRRLSTDDKAPVKKAACSLLKSYLSYCDEASKFEVVLSILQMLCRDRMVSV 632 (1529)
T ss_pred cchhhhhhcchhhhhccccHHHHHHHHHHHHHhccCCCcccchhhHHHHHHHHhccchhhcchhHHHHHHHHhcCcchHH
Confidence 01123446666666666 888899999999999988888887777777888999999999999
Q ss_pred HHHHHHHHHHHHHHhCccch-hhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhh-ccccchhHHHH-Hh------hHHHH
Q psy14014 262 RYMVADKFTDLQKAVGPEIT-KTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQN-LDAYNQENIIM-TY------ILPYV 332 (615)
Q Consensus 262 R~~~~~~l~~l~~~~~~~~~-~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~-~~~~~~~~~~~-~~------l~p~l 332 (615)
|..++.+|+.+...-+.-.. ....+-.++..++|.+..|.+.|...+..+..- +.+...-.|.+ .. .-.++
T Consensus 633 rk~~~~Sltel~~~~pr~~~~~~~wl~~li~~~~d~es~v~e~a~~~i~k~l~p~~~~~~dlaW~LL~~i~~~~~~s~yl 712 (1529)
T KOG0413|consen 633 RKTGADSLTELMLRDPRLFSLSSKWLHTLISMLNDTESDVTEHARKLIMKVLTPLLENSSDLAWTLLDTIESVTNHSQYL 712 (1529)
T ss_pred HHHHHHHHHHHHhhCchhhhhhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHhhhcccCCchHHHHHHHHHHHHHHHHHH
Confidence 99999999987654222111 123445677788999999999998877665542 22221111110 00 00111
Q ss_pred HHh-------------------------hCCCCHHHHHHHHHHHHhhc--hh-hc------chhhhhhhHHHHHH----h
Q psy14014 333 KDL-------------------------VADPNQHVKSALASVIMGLS--PI-LG------KHNTVDHLLPLFLS----Q 374 (615)
Q Consensus 333 ~~~-------------------------~~d~~~~vR~~~~~~l~~l~--~~-~g------~~~~~~~l~p~l~~----~ 374 (615)
... ..|+-|.+-..++....++- .. .. .++..++ +-++.+ +
T Consensus 713 ~~~~h~w~~~~k~~~t~~d~~~~hsG~E~~~~aWm~~s~~~~q~~~~d~S~~~~s~~~~s~~~N~~~~-L~hI~~~i~~i 791 (1529)
T KOG0413|consen 713 MSTLHDWVREKKVKRTVMDSMKQHSGSEKLDGAWMVFSQLCVQFEQVDFSIETFSRVDLSRESNLVQY-LIHIIENIKKI 791 (1529)
T ss_pred HHHHHHHHHHHhcchhhhhhhhcccCcccCcchHHHHHHHHhcccccceeeecccccccchhhhHHHH-HHHHHHHHHhh
Confidence 100 12334544333322222210 00 00 0111112 222222 2
Q ss_pred hcCCChhHHHHHHHhhhHhhhhhchhHHHHHH--HHHhhhhhhhhcc--ccchhhhhhhh-------HHHHHhhhc----
Q psy14014 375 LKDECPEVRLNIISNLDCVNEVIGIQQWRVRL--AIIEYMPLLAGQL--GVEFFDEKLNA-------LSIVELAED---- 439 (615)
Q Consensus 375 l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~--~i~~~l~~l~~~~--~~~~~~~~l~~-------~~i~~~~~~---- 439 (615)
-++-....+.....++..+++.-+ ..|.... ..++.+..++-+. -.++..|.+.. |. ....++
T Consensus 792 ~~~l~s~~vd~~~~a~K~~Ck~~~-~~~s~e~~~~~~d~i~~~sl~~~e~~~~~iE~l~~~c~d~i~~~-~~~~~~~~~~ 869 (1529)
T KOG0413|consen 792 DDDLKSDLVDTLQGAFKDYCKHPS-SRSSYECLGKLMDGIGDRSLHGKEFSDFGIETLLIKCFDTIVQS-FEMFKDKDEW 869 (1529)
T ss_pred hhcccHHHHHHHHHHHHHHHcCCc-cccHHHHHHHHHHHHHHHHhhcccCchHHHhhHHHhccceehhH-HhhhhhhHHH
Confidence 222222333333333333333322 1121111 0111111111000 01111121110 11 111111
Q ss_pred -CCchHHHHHHHHhHHHH-----hhhChHhHHHHHHHHHHHhc----C-------------------------CcchHHH
Q psy14014 440 -SKWRVRLAIIEYMPLLA-----GQLGVEFFDEKLNALCMTWL----V-------------------------DHVYAIR 484 (615)
Q Consensus 440 -~~~~vr~~~~~~l~~l~-----~~~~~~~~~~~l~~~l~~~l----~-------------------------d~~~~vR 484 (615)
.+..-...++-.--.++ ..++.. -....++.+.+-. . -....+|
T Consensus 870 ~~~s~~~~~~l~~~y~v~~~~~~ql~P~a-r~~K~~~lLv~s~~~gssDa~htp~tq~se~p~sqp~~~v~g~~~~~~vr 948 (1529)
T KOG0413|consen 870 KRNSESQERLLCTAYNVAFSYSPQLVPHA-RLGKTLSLLVNSTENGSSDAPHTPPTQLSEVPSSQPSSKVEGAMFSDKVR 948 (1529)
T ss_pred hhcchhHHHHHHHHhhccccccceeccch-hccceeeeeeeeeccCCCCCCCCCccchhhCcccCCCccccccccchHHH
Confidence 11111111111111111 101100 0011111111110 0 1145688
Q ss_pred HHHHHHHHHHHHHhChHHhhhchhHHHHhhhc-CCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHH
Q psy14014 485 EAATLNLKKLVEQFGSEWAQSTVIPKVVAMSR-DQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRF 563 (615)
Q Consensus 485 ~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~-d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~ 563 (615)
..+..++++++-.-+ ......+|.+.+-++ .....+|.+.+-+++.++..+. ...+...|.+...+.|+++-||.
T Consensus 949 a~~vvTlakmcLah~--~LaKr~~P~lvkeLe~~~~~aiRnNiV~am~D~C~~YT--am~d~YiP~I~~~L~Dp~~iVRr 1024 (1529)
T KOG0413|consen 949 AVGVVTLAKMCLAHD--RLAKRLMPMLVKELEYNTAHAIRNNIVLAMGDICSSYT--AMTDRYIPMIAASLCDPSVIVRR 1024 (1529)
T ss_pred HHHHHHHHHHHhhhh--HHHHHHHHHHHHHHHhhhHHHHhcceeeeehhhHHHHH--HHHHHhhHHHHHHhcCchHHHHH
Confidence 889999999886543 244568898877554 4566789998888888875442 23456789999999999999999
Q ss_pred HHHHHHHHHhHhhhhhhHHhhHHHHHhhhcCCCCccHHHHHHHHHHHHhh
Q psy14014 564 NVAKTLQKIGPILETNVIQSQVKPALDKLNGDTDVDVKYFAQEAISSIAD 613 (615)
Q Consensus 564 ~a~~~l~~l~~~~~~~~~~~~~~~~l~~l~~d~d~~v~~~a~~a~~~~~~ 613 (615)
.+...|+++.+.-=-++-...+...+..| -|.++++|..|...++.+-.
T Consensus 1025 qt~ilL~rLLq~~~vKw~G~Lf~Rf~l~l-~D~~edIr~~a~f~~~~vL~ 1073 (1529)
T KOG0413|consen 1025 QTIILLARLLQFGIVKWNGELFIRFMLAL-LDANEDIRNDAKFYISEVLQ 1073 (1529)
T ss_pred HHHHHHHHHHhhhhhhcchhhHHHHHHHH-cccCHHHHHHHHHHHHHHHh
Confidence 99999999986422223334455555555 68999999999988876643
No 82
>PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins. MMS19 is required for both nucleotide excision repair (NER) and RNA polymerase II (RNAP II) transcription [].
Probab=98.64 E-value=4.9e-05 Score=77.02 Aligned_cols=334 Identities=16% Similarity=0.123 Sum_probs=197.6
Q ss_pred HHHHhcCccH---HHHHHHHhcHHHHHHHhCcchhhccchhhhhh----hcCC--cHHHHHHHHHHhccccCCCCC----
Q psy14014 18 LIDELKNEDV---QLRLNSIKKLSTIALALGQERTRGELIPFLTE----TIYD--EDEVLLALAEQLGTFTPNVGG---- 84 (615)
Q Consensus 18 ll~~l~s~d~---~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~----~~~~--~~~vr~~a~~~l~~l~~~~~~---- 84 (615)
++..+.+.+. ..+...+..|..++ ......+.+++.+.+ .++. +.+.-..+..++..+.+....
T Consensus 4 ll~~Lpd~~~~~~~~~~~~L~~l~~ls---~~~~i~~~~~~~ll~kl~~~~~~~~~~~~~~~il~tl~~~~~~~~~~~~~ 80 (415)
T PF12460_consen 4 LLALLPDSDSSTDSNYERILEALAALS---TSPQILETLSIRLLNKLSIVCQSESSSDYCHAILSTLQSLLEKKQEDKQF 80 (415)
T ss_pred HHhhCCCCCCcchhHHHHHHHHHHHHH---CChhHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHhccccccc
Confidence 3444444333 33444555555554 333344445554433 3321 223444555555555432211
Q ss_pred ---cchhhh-chHHHhhhhc-----Cc--hhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhc---------CCC--
Q psy14014 85 ---PEYVHC-LLPPLESLAT-----VE--ETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLAS---------GDW-- 142 (615)
Q Consensus 85 ---~~~~~~-l~~~l~~l~~-----~~--~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~---------~~~-- 142 (615)
..|.+. ++|.+..+.. ++ ++.+-..+...+..+...++.+.-.+.+-....-... +..
T Consensus 81 ~~~~~y~~~~lv~~l~~~~~~~~~~~~~~~~~~L~~~~~l~~~iv~~l~~~~q~~~~~~~~~lf~~~~~~~~~~~~~~~~ 160 (415)
T PF12460_consen 81 EDNSWYFHRILVPRLFELALQASDQSSDLDDRVLELLSRLINLIVRSLSPEKQQEILDELYSLFLSPKSFSPFQPSSSTI 160 (415)
T ss_pred chHHHHHHhHHHHHHHHHHHhhcccccccchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHccccccCCCCcccccc
Confidence 122232 6665544431 22 3567777778888888888876554442222221220 100
Q ss_pred --cchhhh--HHhhhhhhccCCChhhHHHHHHHHHHHh-CCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhh-c
Q psy14014 143 --FTSRTS--ACGLFSVCYPRVTAGVKAELRSHFRNLC-QDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLA-Q 216 (615)
Q Consensus 143 --~~~r~~--a~~~l~~~~~~~~~~~~~~l~~~l~~l~-~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~-~ 216 (615)
...|.. ..++++.+-+.+.-....+++..+..+. ...++..|..+++.++.+....+++.....++..+.... .
T Consensus 161 ~~~~~~~~~l~~~il~~l~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~~~~~la~LvNK~~~~~~l~~~l~~~~~~~~~ 240 (415)
T PF12460_consen 161 SEQQSRLVILFSAILCSLRKDVSLPDLEELLQSLLNLALSSEDEFSRLAALQLLASLVNKWPDDDDLDEFLDSLLQSISS 240 (415)
T ss_pred ccccccHHHHHHHHHHcCCcccCccCHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHcCCCChhhHHHHHHHHHhhhcc
Confidence 111221 1133333333332112334666555554 445699999999999999988766554555665555544 5
Q ss_pred cCchhHHHHHHHHHHHHHhhcC--hhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCc---------------c
Q psy14014 217 DEQDSVRLLAVEACVSIASLLS--QSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGP---------------E 279 (615)
Q Consensus 217 d~~~~vr~~a~~~l~~l~~~~~--~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~---------------~ 279 (615)
......|..+++.+..+++.+- .......+...+.+++.| +.+...+++.|+-+....+. +
T Consensus 241 ~~~~~~~~~~~~~~~Wi~KaLv~R~~~~~~~~~~~L~~lL~~--~~~g~~aA~~f~il~~d~~~~l~~~~~a~vklLykQ 318 (415)
T PF12460_consen 241 SEDSELRPQALEILIWITKALVMRGHPLATELLDKLLELLSS--PELGQQAAKAFGILLSDSDDVLNKENHANVKLLYKQ 318 (415)
T ss_pred cCCcchhHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHhCC--hhhHHHHHHHHhhHhcCcHHhcCccccchhhhHHhH
Confidence 5666778888888776665442 222334466667777777 66788888888877643210 0
Q ss_pred chhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchh
Q psy14014 280 ITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPI 357 (615)
Q Consensus 280 ~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~ 357 (615)
-....++|.+.+..++.+.+.|.....+|..+++++|..-.. ...+.++|.+.+.+.-++..+|.+++.++..+...
T Consensus 319 R~F~~~~p~L~~~~~~~~~~~k~~yL~ALs~ll~~vP~~vl~-~~l~~LlPLLlqsL~~~~~~v~~s~L~tL~~~l~~ 395 (415)
T PF12460_consen 319 RFFTQVLPKLLEGFKEADDEIKSNYLTALSHLLKNVPKSVLL-PELPTLLPLLLQSLSLPDADVLLSSLETLKMILEE 395 (415)
T ss_pred HHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHhhCCHHHHH-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHc
Confidence 112457888888888888889999999999999998865432 34677999999999989999999999988877653
No 83
>KOG1058|consensus
Probab=98.63 E-value=0.00041 Score=70.76 Aligned_cols=315 Identities=14% Similarity=0.133 Sum_probs=175.9
Q ss_pred HHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccc-hhhhHHHHHH
Q psy14014 212 VNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEI-TKTDLVQAFQ 290 (615)
Q Consensus 212 ~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~-~~~~l~~~l~ 290 (615)
..-++++++.+|-..+..+..+ .+.+....++|.+..++++++..||+.++-++..+...+..-. ..++++..+
T Consensus 105 RkDLQHPNEyiRG~TLRFLckL----kE~ELlepl~p~IracleHrhsYVRrNAilaifsIyk~~~~L~pDapeLi~~f- 179 (948)
T KOG1058|consen 105 RKDLQHPNEYIRGSTLRFLCKL----KEPELLEPLMPSIRACLEHRHSYVRRNAILAIFSIYKNFEHLIPDAPELIESF- 179 (948)
T ss_pred hhhccCchHhhcchhhhhhhhc----CcHHHhhhhHHHHHHHHhCcchhhhhhhheeehhHHhhhhhhcCChHHHHHHH-
Confidence 3345688999998877766543 4445566789999999999999999999999888776522110 112333322
Q ss_pred HhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhC---CCCHHHHHHHHHHHHhhchhhcchhhhhhh
Q psy14014 291 MLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVA---DPNQHVKSALASVIMGLSPILGKHNTVDHL 367 (615)
Q Consensus 291 ~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~---d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l 367 (615)
+..+.++..+..|+-.|-..-. +..+.|+...+. +-+......+.+.+...+.. ........
T Consensus 180 -L~~e~DpsCkRNAFi~L~~~D~------------ErAl~Yl~~~idqi~~~~~~LqlViVE~Irkv~~~--~p~~~~~~ 244 (948)
T KOG1058|consen 180 -LLTEQDPSCKRNAFLMLFTTDP------------ERALNYLLSNIDQIPSFNDSLQLVIVELIRKVCLA--NPAEKARY 244 (948)
T ss_pred -HHhccCchhHHHHHHHHHhcCH------------HHHHHHHHhhHhhccCccHHHHHHHHHHHHHHHhc--CHHHhhHH
Confidence 3467788888877766543221 234444444332 22345555555555555431 11122345
Q ss_pred HHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhh-hcCCchHHH
Q psy14014 368 LPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELA-EDSKWRVRL 446 (615)
Q Consensus 368 ~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~-~~~~~~vr~ 446 (615)
+..+..+|...++.|+..|..++..+.... ..+.. +. ..+.+++ +.++-+++.
T Consensus 245 i~~i~~lL~stssaV~fEaa~tlv~lS~~p--~alk~--Aa----------------------~~~i~l~~kesdnnvkl 298 (948)
T KOG1058|consen 245 IRCIYNLLSSTSSAVIFEAAGTLVTLSNDP--TALKA--AA----------------------STYIDLLVKESDNNVKL 298 (948)
T ss_pred HHHHHHHHhcCCchhhhhhcceEEEccCCH--HHHHH--HH----------------------HHHHHHHHhccCcchhh
Confidence 667777888778888888877765543211 11100 00 1111111 122333444
Q ss_pred HHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHh---hhcCCCchHH
Q psy14014 447 AIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVA---MSRDQNYLHR 523 (615)
Q Consensus 447 ~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~---~~~d~~~~~R 523 (615)
-...-+..+. ......+.+.++. ++..+..++.+||..++...-.++..-+.+.....+-..+.+ .-.+.+...|
T Consensus 299 Ivldrl~~l~-~~~~~il~~l~mD-vLrvLss~dldvr~Ktldi~ldLvssrNvediv~~Lkke~~kT~~~e~d~~~~yR 376 (948)
T KOG1058|consen 299 IVLDRLSELK-ALHEKILQGLIMD-VLRVLSSPDLDVRSKTLDIALDLVSSRNVEDIVQFLKKEVMKTHNEESDDNGKYR 376 (948)
T ss_pred hhHHHHHHHh-hhhHHHHHHHHHH-HHHHcCcccccHHHHHHHHHHhhhhhccHHHHHHHHHHHHHhccccccccchHHH
Confidence 4444444443 1122223333333 567788888888888888776666543332221111112221 1234566678
Q ss_pred HHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhh
Q psy14014 524 MTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPIL 576 (615)
Q Consensus 524 ~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~ 576 (615)
+..++++...+-.++ .+...+.|.+...+.|.++..-..+..-+...++.+
T Consensus 377 qlLiktih~cav~Fp--~~aatvV~~ll~fisD~N~~aas~vl~FvrE~iek~ 427 (948)
T KOG1058|consen 377 QLLIKTIHACAVKFP--EVAATVVSLLLDFISDSNEAAASDVLMFVREAIEKF 427 (948)
T ss_pred HHHHHHHHHHhhcCh--HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhC
Confidence 888888888765543 345667888888888877755444444444444443
No 84
>KOG1077|consensus
Probab=98.62 E-value=0.00094 Score=67.74 Aligned_cols=75 Identities=9% Similarity=0.133 Sum_probs=50.8
Q ss_pred HHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhc-CCChhHHHHHHHhhhHhhhhhc
Q psy14014 324 IMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLK-DECPEVRLNIISNLDCVNEVIG 398 (615)
Q Consensus 324 ~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~-d~~~~vr~~a~~~l~~l~~~~~ 398 (615)
........|-+.+.+.+..+|--+++.+..++..-..-....+-...++..|+ +++..||+.|+..|-.++..-.
T Consensus 326 ll~~~~~~Lg~fls~rE~NiRYLaLEsm~~L~ss~~s~davK~h~d~Ii~sLkterDvSirrravDLLY~mcD~~N 401 (938)
T KOG1077|consen 326 LLSRAVNQLGQFLSHRETNIRYLALESMCKLASSEFSIDAVKKHQDTIINSLKTERDVSIRRRAVDLLYAMCDVSN 401 (938)
T ss_pred HHHHHHHHHHHHhhcccccchhhhHHHHHHHHhccchHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhchhh
Confidence 34445555666677778888888888888777652222223333667777777 7889999999998877765433
No 85
>COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion]
Probab=98.62 E-value=0.0013 Score=69.17 Aligned_cols=166 Identities=17% Similarity=0.218 Sum_probs=112.8
Q ss_pred hcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhh-hcCCcHHHHHHHHHHhccccCCCCCcchhhhchHHHhhhhc
Q psy14014 22 LKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTE-TIYDEDEVLLALAEQLGTFTPNVGGPEYVHCLLPPLESLAT 100 (615)
Q Consensus 22 l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~-~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~l~~ 100 (615)
+.|.+...|..|++.+-... ..|.+ ...+.|-+.. ....+.++++..=-=+..+++.- ++-.-..++.+..=+.
T Consensus 28 l~s~n~~~kidAmK~iIa~M-~~G~d--mssLf~dViK~~~trd~ElKrL~ylYl~~yak~~--P~~~lLavNti~kDl~ 102 (757)
T COG5096 28 LESSNDYKKIDAMKKIIAQM-SLGED--MSSLFPDVIKNVATRDVELKRLLYLYLERYAKLK--PELALLAVNTIQKDLQ 102 (757)
T ss_pred ccccChHHHHHHHHHHHHHH-hcCCC--hHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccC--HHHHHHHHHHHHhhcc
Confidence 66777888889988765553 23444 3445555444 33444478776654444444422 2222223455666678
Q ss_pred CchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHH-HHHHHHHHhCCC
Q psy14014 101 VEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAE-LRSHFRNLCQDD 179 (615)
Q Consensus 101 ~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~-l~~~l~~l~~d~ 179 (615)
|+++.+|-.|+.+++.+ ....+...+++.+.++.++++..+|+.|+-.+..++..=.+..... ....+..+..|.
T Consensus 103 d~N~~iR~~AlR~ls~l----~~~el~~~~~~~ik~~l~d~~ayVRk~Aalav~kly~ld~~l~~~~g~~~~l~~l~~D~ 178 (757)
T COG5096 103 DPNEEIRGFALRTLSLL----RVKELLGNIIDPIKKLLTDPHAYVRKTAALAVAKLYRLDKDLYHELGLIDILKELVADS 178 (757)
T ss_pred CCCHHHHHHHHHHHHhc----ChHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHhcCHhhhhcccHHHHHHHHhhCC
Confidence 89999999999777654 5566777888889999999999999999888888775544433333 556677788899
Q ss_pred ChHHHHHHHHhHHHHHH
Q psy14014 180 TPMVRRAAAGKLGELAK 196 (615)
Q Consensus 180 ~~~vR~~a~~~l~~l~~ 196 (615)
+|.|-.+|..++..+..
T Consensus 179 dP~Vi~nAl~sl~~i~~ 195 (757)
T COG5096 179 DPIVIANALASLAEIDP 195 (757)
T ss_pred CchHHHHHHHHHHHhch
Confidence 99999988888877754
No 86
>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region
Probab=98.62 E-value=4.1e-07 Score=69.80 Aligned_cols=89 Identities=16% Similarity=0.234 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHhChH--HhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhhH--HHhhHHHHHhhCCCCC
Q psy14014 483 IREAATLNLKKLVEQFGSE--WAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVT--ANFLLPTVLNMAGDNV 558 (615)
Q Consensus 483 vR~~a~~~l~~l~~~~~~~--~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~--~~~i~~~l~~~~~D~~ 558 (615)
.|..++.++..++..++.. .+.+.++|.++..+.|+++++|..|++++.++++....... .+.+++.|.++..|++
T Consensus 2 ~R~ggli~Laa~ai~l~~~~~~~l~~Il~pVL~~~~D~d~rVRy~AcEaL~ni~k~~~~~~l~~f~~IF~~L~kl~~D~d 81 (97)
T PF12755_consen 2 YRKGGLIGLAAVAIALGKDISKYLDEILPPVLKCFDDQDSRVRYYACEALYNISKVARGEILPYFNEIFDALCKLSADPD 81 (97)
T ss_pred chhHHHHHHHHHHHHchHhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 3777888888887777654 24467888888888999999999999999998887766553 3668888888889999
Q ss_pred chHHHHHHHHHHHH
Q psy14014 559 ANVRFNVAKTLQKI 572 (615)
Q Consensus 559 ~~vr~~a~~~l~~l 572 (615)
++||.++ ..|.++
T Consensus 82 ~~Vr~~a-~~Ld~l 94 (97)
T PF12755_consen 82 ENVRSAA-ELLDRL 94 (97)
T ss_pred hhHHHHH-HHHHHH
Confidence 9998866 555544
No 87
>PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins. MMS19 is required for both nucleotide excision repair (NER) and RNA polymerase II (RNAP II) transcription [].
Probab=98.58 E-value=0.00045 Score=70.10 Aligned_cols=198 Identities=17% Similarity=0.158 Sum_probs=136.3
Q ss_pred hHHHHHHhh-cCCChhHHHHHHHhhhHhhhhhchhH-HHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHh-hhcCCch
Q psy14014 367 LLPLFLSQL-KDECPEVRLNIISNLDCVNEVIGIQQ-WRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVEL-AEDSKWR 443 (615)
Q Consensus 367 l~p~l~~~l-~d~~~~vr~~a~~~l~~l~~~~~~~~-~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~-~~~~~~~ 443 (615)
++..+.+.. ..+++..|..+.+.++.++.....++ +... + ...... .......
T Consensus 190 ll~~l~~~~~~~~~~~~~~~~~~~la~LvNK~~~~~~l~~~------l------------------~~~~~~~~~~~~~~ 245 (415)
T PF12460_consen 190 LLQSLLNLALSSEDEFSRLAALQLLASLVNKWPDDDDLDEF------L------------------DSLLQSISSSEDSE 245 (415)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHcCCCChhhHHHH------H------------------HHHHhhhcccCCcc
Confidence 555555554 34458899999999888876653322 2111 1 111111 2344556
Q ss_pred HHHHHHHHhHHHHhhh---ChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhCh---------------HHhhh
Q psy14014 444 VRLAIIEYMPLLAGQL---GVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGS---------------EWAQS 505 (615)
Q Consensus 444 vr~~~~~~l~~l~~~~---~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~---------------~~~~~ 505 (615)
.|..+++.+..+++++ |.. ....+...++.++.| ..+...+.+.++.+...... ..+..
T Consensus 246 ~~~~~~~~~~Wi~KaLv~R~~~-~~~~~~~~L~~lL~~--~~~g~~aA~~f~il~~d~~~~l~~~~~a~vklLykQR~F~ 322 (415)
T PF12460_consen 246 LRPQALEILIWITKALVMRGHP-LATELLDKLLELLSS--PELGQQAAKAFGILLSDSDDVLNKENHANVKLLYKQRFFT 322 (415)
T ss_pred hhHHHHHHHHHHHHHHHHcCCc-hHHHHHHHHHHHhCC--hhhHHHHHHHHhhHhcCcHHhcCccccchhhhHHhHHHHH
Confidence 6777888887787765 222 234567777888877 66788899998888765211 01234
Q ss_pred chhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhhHH---HhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhhHH
Q psy14014 506 TVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVTA---NFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQ 582 (615)
Q Consensus 506 ~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~~---~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~ 582 (615)
.++|.+.+.++..+...|.+.+.++..+.+..+...+. +.++|.+.+.+.-++++++..+..++..+.... ++.+.
T Consensus 323 ~~~p~L~~~~~~~~~~~k~~yL~ALs~ll~~vP~~vl~~~l~~LlPLLlqsL~~~~~~v~~s~L~tL~~~l~~~-~~~i~ 401 (415)
T PF12460_consen 323 QVLPKLLEGFKEADDEIKSNYLTALSHLLKNVPKSVLLPELPTLLPLLLQSLSLPDADVLLSSLETLKMILEEA-PELIS 401 (415)
T ss_pred HHHHHHHHHHhhcChhhHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcC-HHHHH
Confidence 58889988888877779999999999999999887764 579999999998889999999999999998654 34455
Q ss_pred hhHHHHHhhh
Q psy14014 583 SQVKPALDKL 592 (615)
Q Consensus 583 ~~~~~~l~~l 592 (615)
+.+..++..|
T Consensus 402 ~hl~sLI~~L 411 (415)
T PF12460_consen 402 EHLSSLIPRL 411 (415)
T ss_pred HHHHHHHHHH
Confidence 5566665555
No 88
>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region
Probab=98.56 E-value=9.5e-07 Score=67.83 Aligned_cols=88 Identities=25% Similarity=0.297 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHhhhChhh--HHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhh--HHhhHHHHHhhhcCCCC
Q psy14014 522 HRMTCLFCINVLAEACGPTV--TANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNV--IQSQVKPALDKLNGDTD 597 (615)
Q Consensus 522 ~R~~a~~~l~~l~~~~~~~~--~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~--~~~~~~~~l~~l~~d~d 597 (615)
.|..++.++..++..++... +.+.++|.+.+++.|++..||+.|+++|.++........ ....+.+.+-++..|.|
T Consensus 2 ~R~ggli~Laa~ai~l~~~~~~~l~~Il~pVL~~~~D~d~rVRy~AcEaL~ni~k~~~~~~l~~f~~IF~~L~kl~~D~d 81 (97)
T PF12755_consen 2 YRKGGLIGLAAVAIALGKDISKYLDEILPPVLKCFDDQDSRVRYYACEALYNISKVARGEILPYFNEIFDALCKLSADPD 81 (97)
T ss_pred chhHHHHHHHHHHHHchHhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 58888999999988877653 457899999999999999999999999999998776543 34667777788899999
Q ss_pred ccHHHHHHHHHH
Q psy14014 598 VDVKYFAQEAIS 609 (615)
Q Consensus 598 ~~v~~~a~~a~~ 609 (615)
+.||..|...-.
T Consensus 82 ~~Vr~~a~~Ld~ 93 (97)
T PF12755_consen 82 ENVRSAAELLDR 93 (97)
T ss_pred hhHHHHHHHHHH
Confidence 999999965433
No 89
>KOG4535|consensus
Probab=98.52 E-value=7.5e-05 Score=71.96 Aligned_cols=461 Identities=12% Similarity=0.083 Sum_probs=239.3
Q ss_pred CchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHHHHHhCCCC
Q psy14014 101 VEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQDDT 180 (615)
Q Consensus 101 ~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~~l~~d~~ 180 (615)
+.+..||..|...+....+.++...+..+ ...+.-|... .-+ + .++.-.++|++
T Consensus 7 ~~~akvr~~al~~~~~~~~~~~~~~~ygy----w~~~~pd~~~---------------~g~----p---~l~~l~lkd~~ 60 (728)
T KOG4535|consen 7 SYQAKVRQGALVCFLSTIKSIEKKVLYGY----WSAFIPDTPE---------------LGS----P---SLMTLTLKDPS 60 (728)
T ss_pred hHHHHHHhhHHHHHHHHHhhhhhhhhhce----eeeecCCCCC---------------CCC----c---eeeEEecCCCC
Confidence 34678999999999998888876543322 1111111100 000 0 01122357888
Q ss_pred hHHHHHHHHhHHHHHHHh----------chhhhHh----------hhHHHHHHh-hccCchhHHHHHHHHHHHHHhhcCh
Q psy14014 181 PMVRRAAAGKLGELAKVV----------EVDYLKT----------DIIPMFVNL-AQDEQDSVRLLAVEACVSIASLLSQ 239 (615)
Q Consensus 181 ~~vR~~a~~~l~~l~~~~----------~~~~~~~----------~ll~~l~~~-~~d~~~~vr~~a~~~l~~l~~~~~~ 239 (615)
++.|..+++.+..+.... ++..+.+ .+.-+++.. ..+..+.+-..+++++..+....+-
T Consensus 61 ~~~ra~alqv~~~~l~gsk~fls~a~~~~~~~ftpf~v~~a~si~~~~r~l~~~l~~e~~~~~~tq~~kcla~lv~~~p~ 140 (728)
T KOG4535|consen 61 PKTRACALQVLSAILEGSKQFLSVAEDTSDHAFTPFSVMIACSIRELHRCLLLALVAESSSQTVTQIIKCLANLVSNAPY 140 (728)
T ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHhccCCcCCCchHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhcCch
Confidence 888888877776664321 1111110 111122222 2344566777888888888887775
Q ss_pred hh----HHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccc---------------hhhhHH--HHHHHhhc----
Q psy14014 240 SD----VEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEI---------------TKTDLV--QAFQMLLK---- 294 (615)
Q Consensus 240 ~~----~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~---------------~~~~l~--~~l~~~l~---- 294 (615)
+. +...+...++.++.+.++.||-.+...++.+......-. ..+++- ..+.++..
T Consensus 141 ~~l~~~~~~~~~~~ik~~i~~~d~~v~vs~l~~~~~~v~t~~~~pei~~~~~~~~s~~n~~~~h~s~~~~~~~l~~~~~~ 220 (728)
T KOG4535|consen 141 DRLKLSLLTKVWNQIKPYIRHKDVNVRVSSLTLLGAIVSTHAPLPEVQLLLQQPCSSSNSATPHLSPPDWWKKLPAGPSL 220 (728)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHhcCCCCHHHHHHhcCCCccccccCCCCCChHHHHhcCCCchh
Confidence 43 233466677888889999999998888877654321100 000110 01111110
Q ss_pred ---------------------------------------------CCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhH
Q psy14014 295 ---------------------------------------------DSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYIL 329 (615)
Q Consensus 295 ---------------------------------------------d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~ 329 (615)
-.-..+|..+++.+..++.+++-. ..+.-++.
T Consensus 221 ~e~~~~~~~~~~~~~~~i~~~~~i~~~~~~~s~~~~~~~~~~~~~~~ps~~rle~~qvl~~~a~~~~~~---~~~~~~l~ 297 (728)
T KOG4535|consen 221 EETSVSSPKGSSEPCWLIRLCISIVVLPKEDSCSGSDAGSAAGSTYEPSPMRLEALQVLTLLARYFSMT---QAYLMELG 297 (728)
T ss_pred hhhccCCccCCCCCcceeeeeeeeeecCCccccchhhHHhhhcCccCCchhHHHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence 011246666666666666654321 12233444
Q ss_pred HHHHHhhCCCCHHHHHHHHHHHHhhchhhcch----hhhhhhHHH-HH-Hhh---------cCCChhHHHHHHHhhhHhh
Q psy14014 330 PYVKDLVADPNQHVKSALASVIMGLSPILGKH----NTVDHLLPL-FL-SQL---------KDECPEVRLNIISNLDCVN 394 (615)
Q Consensus 330 p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~----~~~~~l~p~-l~-~~l---------~d~~~~vr~~a~~~l~~l~ 394 (615)
..+...+.+..+.++.-++..+..+....+.+ .....+... |. -.+ ....+..+-.++.++..+.
T Consensus 298 RvI~~~~~~~~p~~~l~~a~ll~~lg~~lv~~~~P~~~k~~~q~~~fw~~~l~~p~~~~~YDs~~~Tl~~s~Cdals~i~ 377 (728)
T KOG4535|consen 298 RVICKCMGEADPSIQLHGAKLLEELGTGLIQQYKPDSTKAPDQRAPFWTMMLNGPLPRALYDSEHPTLQASACDALSSIL 377 (728)
T ss_pred HHHHccCCCCChHHHHHHHHHHHHHHHHHhhhcCCCcccchhhhccHHHHHccCCChhhhhhhcCCCchhHHHHHHhhcC
Confidence 55555667777777777777777666554421 111111100 11 011 0111222222222222221
Q ss_pred hhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhc-CCchHHHHHHHHhHHHHhhhChHh---HHHHHHH
Q psy14014 395 EVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAED-SKWRVRLAIIEYMPLLAGQLGVEF---FDEKLNA 470 (615)
Q Consensus 395 ~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~-~~~~vr~~~~~~l~~l~~~~~~~~---~~~~l~~ 470 (615)
... + +-+|. |. ... .+.+.....| ++--+|.+++..+....-..|... +......
T Consensus 378 ~~~----f-------~~lpn-----~~----~T~-~~~Fl~GC~d~~~~lv~~aA~Ra~~VyVLHp~lr~d~~fv~~aa~ 436 (728)
T KOG4535|consen 378 PEA----F-------SNLPN-----DR----QTL-CITFLLGCNDSKNRLVKAAASRALGVYVLHPCLRQDVIFVADAAN 436 (728)
T ss_pred chh----h-------cCCCC-----cc----hhh-hHHHHhcccchHHHHHHHHHHhhceeEEeccchhhhHHHHHHHHH
Confidence 100 0 00000 00 000 0344444443 344466666666554432223221 2233444
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHhCh-----HHhhhc----hhHHHHhh---hcCCCchHHHHHHHHHHHHHhhhC
Q psy14014 471 LCMTWLVDHVYAIREAATLNLKKLVEQFGS-----EWAQST----VIPKVVAM---SRDQNYLHRMTCLFCINVLAEACG 538 (615)
Q Consensus 471 ~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~-----~~~~~~----i~~~l~~~---~~d~~~~~R~~a~~~l~~l~~~~~ 538 (615)
.+...+.|+...+|+.+..+++.|...+-. +.+... .+-.+... +.-.+++||.++.+++|++.....
T Consensus 437 ~il~sl~d~~ln~r~KaawtlgnITdAL~~~~Ps~~s~~eR~sg~ll~~~~~~A~~~~Ad~dkV~~navraLgnllQvlq 516 (728)
T KOG4535|consen 437 AILMSLEDKSLNVRAKAAWSLGNITDALIVNMPTPDSFQERFSGLLLLKMLRSAIEASADKDKVKSNAVRALGNLLQFLQ 516 (728)
T ss_pred HHHHHhhhHhHhHHHHHHHHhhhhHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhHHHHHH
Confidence 556667888999999999999999887621 222222 23333332 233588899999999999987654
Q ss_pred hhh---HHHh----hHHHHHhhCCCCCchHHHHHHHHHHHHhHhhh----hhhHHhhHHHHHhhh-cCCCCccHHHHHHH
Q psy14014 539 PTV---TANF----LLPTVLNMAGDNVANVRFNVAKTLQKIGPILE----TNVIQSQVKPALDKL-NGDTDVDVKYFAQE 606 (615)
Q Consensus 539 ~~~---~~~~----i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~----~~~~~~~~~~~l~~l-~~d~d~~v~~~a~~ 606 (615)
+-. +.+. +...+..-.....-.||+++|.+++++.++-. +.....++.+++-.| ....+--||-.|..
T Consensus 517 ~i~~~~~~e~~~~~~~~l~~~v~~~~~~kV~WNaCya~gNLfkn~a~~lq~~~wA~~~F~~L~~Lv~~~~NFKVRi~AA~ 596 (728)
T KOG4535|consen 517 PIEKPTFAEIIEESIQALISTVLTEAAMKVRWNACYAMGNLFKNPALPLQTAPWASQAFNALTSLVTSCKNFKVRIRAAA 596 (728)
T ss_pred HhhhccHHHHHHHHHHhcccceecccccccchHHHHHHHHhhcCccccccCCCchHHHHHHHHHHHHHhccceEeehhhh
Confidence 211 1111 11222222345566899999999999986521 223345666666665 56678889999888
Q ss_pred HHHHH
Q psy14014 607 AISSI 611 (615)
Q Consensus 607 a~~~~ 611 (615)
|+..-
T Consensus 597 aL~vp 601 (728)
T KOG4535|consen 597 ALSVP 601 (728)
T ss_pred hhcCC
Confidence 87643
No 90
>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A.
Probab=98.50 E-value=7.4e-07 Score=68.57 Aligned_cols=85 Identities=28% Similarity=0.343 Sum_probs=58.3
Q ss_pred HHHHHhc-CCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHH
Q psy14014 248 PTLRQCS-GDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMT 326 (615)
Q Consensus 248 ~~l~~~~-~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~ 326 (615)
|.+.+.+ +|+++.+|..++.+++.+. ..+.+|.+..+++|+++.||..|+.+|+.+.. +
T Consensus 2 ~~L~~~l~~~~~~~vr~~a~~~L~~~~--------~~~~~~~L~~~l~d~~~~vr~~a~~aL~~i~~------------~ 61 (88)
T PF13646_consen 2 PALLQLLQNDPDPQVRAEAARALGELG--------DPEAIPALIELLKDEDPMVRRAAARALGRIGD------------P 61 (88)
T ss_dssp HHHHHHHHTSSSHHHHHHHHHHHHCCT--------HHHHHHHHHHHHTSSSHHHHHHHHHHHHCCHH------------H
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHcC--------CHhHHHHHHHHHcCCCHHHHHHHHHHHHHhCC------------H
Confidence 4555555 7788888888887777432 24677888888888888888888888876532 4
Q ss_pred hhHHHHHHhhCC-CCHHHHHHHHHHHH
Q psy14014 327 YILPYVKDLVAD-PNQHVKSALASVIM 352 (615)
Q Consensus 327 ~l~p~l~~~~~d-~~~~vR~~~~~~l~ 352 (615)
..+|.+.+++.+ .++.||..++.+|+
T Consensus 62 ~~~~~L~~~l~~~~~~~vr~~a~~aL~ 88 (88)
T PF13646_consen 62 EAIPALIKLLQDDDDEVVREAAAEALG 88 (88)
T ss_dssp HTHHHHHHHHTC-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHhhcC
Confidence 466677776554 45566777777664
No 91
>KOG1820|consensus
Probab=98.49 E-value=6.1e-05 Score=80.18 Aligned_cols=193 Identities=14% Similarity=0.139 Sum_probs=153.2
Q ss_pred hhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcc--
Q psy14014 283 TDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGK-- 360 (615)
Q Consensus 283 ~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~-- 360 (615)
..+-+.+...+.+++|.=|..|+..+...+..-. ......+.+.+...+.-...|.+..|-..++..|..++..++.
T Consensus 252 ~ki~~~l~t~~~s~~WK~R~Eale~l~~~l~e~~-~~~~~~~~~ll~~~~ki~~kDaN~~v~~~aa~~l~~ia~~lr~~~ 330 (815)
T KOG1820|consen 252 SKITKNLETEMLSKKWKDRKEALEELVAILEEAK-KEIVKGYTGLLGILLKIRLKDANINVVMLAAQILELIAKKLRPLF 330 (815)
T ss_pred hhcChHHHHhhhccchHHHHHHHHHHHHHHhccc-cccccCcchHHHHHHHHhccCcchhHHHHHHHHHHHHHHhcchhh
Confidence 4567778888899999999999999888777544 1122244566777777888999999999999999999988765
Q ss_pred hhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcC
Q psy14014 361 HNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDS 440 (615)
Q Consensus 361 ~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~ 440 (615)
..+...+.|.++..+.+....+|..+..++..+.+...-..+ . +.+..+++++
T Consensus 331 ~~~~~~v~p~lld~lkekk~~l~d~l~~~~d~~~ns~~l~~~---------~------------------~~I~e~lk~k 383 (815)
T KOG1820|consen 331 RKYAKNVFPSLLDRLKEKKSELRDALLKALDAILNSTPLSKM---------S------------------EAILEALKGK 383 (815)
T ss_pred HHHHHhhcchHHHHhhhccHHHHHHHHHHHHHHHhcccHHHH---------H------------------HHHHHHhcCC
Confidence 344556788999999998899999988888777663322111 1 5778889999
Q ss_pred CchHHHHHHHHhHHHHhhhCh----HhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHh
Q psy14014 441 KWRVRLAIIEYMPLLAGQLGV----EFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWA 503 (615)
Q Consensus 441 ~~~vr~~~~~~l~~l~~~~~~----~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~ 503 (615)
++++|......+.......++ ......+.|.+....+|.+.+||.+|..+++.+.+.+|...+
T Consensus 384 np~~k~~~~~~l~r~~~~~~~~~~~~~t~~~l~p~~~~~~~D~~~~VR~Aa~e~~~~v~k~~Ge~~~ 450 (815)
T KOG1820|consen 384 NPQIKGECLLLLDRKLRKLGPKTVEKETVKTLVPHLIKHINDTDKDVRKAALEAVAAVMKVHGEEVF 450 (815)
T ss_pred ChhhHHHHHHHHHHHHhhcCCcCcchhhHHHHhHHHhhhccCCcHHHHHHHHHHHHHHHHHhhHHHH
Confidence 999999999999888887773 223467899999999999999999999999999999997643
No 92
>KOG2137|consensus
Probab=98.47 E-value=2.8e-05 Score=79.17 Aligned_cols=240 Identities=18% Similarity=0.230 Sum_probs=161.3
Q ss_pred CCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhc
Q psy14014 339 PNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQ 418 (615)
Q Consensus 339 ~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~ 418 (615)
.++.-+..+.+.|..+...+........++|.+...+.+. ...-..+..+-.+.+.
T Consensus 285 kdn~qKs~Flk~Ls~~ip~fp~rv~~~kiLP~L~~el~n~--~~vp~~LP~v~~i~~~---------------------- 340 (700)
T KOG2137|consen 285 KDNSQKSSFLKGLSKLIPTFPARVLFQKILPTLVAELVNT--KMVPIVLPLVLLIAEG---------------------- 340 (700)
T ss_pred cCcHHHHHHHHHHHHhhccCCHHHHHHhhhhHHHHHhccc--cccccccchhhhhhhc----------------------
Confidence 3455566666777666666666666777888887766432 0000000000000000
Q ss_pred cccchhhhhhhhHHHHHhhh-cCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHH
Q psy14014 419 LGVEFFDEKLNALSIVELAE-DSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQ 497 (615)
Q Consensus 419 ~~~~~~~~~l~~~~i~~~~~-~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~ 497 (615)
.....|...+. |.+...++ ..+.+++-.+++.+..+.+.+.++.+.+.++|.+...++|.+..+.+.++..+..+++.
T Consensus 341 ~s~~~~~~~~~-p~l~pi~~~~~~~~~~l~i~e~mdlL~~Kt~~e~~~~~IlplL~~S~~~~~~~iQ~~~L~~lptv~e~ 419 (700)
T KOG2137|consen 341 LSQNEFGPKML-PALKPIYSASDPKQALLFILENMDLLKEKTPPEEVKEKILPLLYRSLEDSDVQIQELALQILPTVAES 419 (700)
T ss_pred cchhhhhhhhh-HHHHHHhccCCcccchhhHHhhHHHHHhhCChHHHHHHHHHHHHHHhcCcchhhHHHHHHhhhHHHHh
Confidence 01111122222 55555554 55667888889999999999999999999999999999999999999999999999998
Q ss_pred hChHHhhhchhHHHHhh-hcCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhh
Q psy14014 498 FGSEWAQSTVIPKVVAM-SRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPIL 576 (615)
Q Consensus 498 ~~~~~~~~~i~~~l~~~-~~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~ 576 (615)
+...+..+.|+|.+.++ ++..+..+|.+++.|++.+++.++..-+.+.++|++.. .+-.++.+......+...+.-..
T Consensus 420 iD~~~vk~~ilP~l~~l~~~tt~~~vkvn~L~c~~~l~q~lD~~~v~d~~lpi~~~-~~~~dp~iv~~~~~i~~~l~~~~ 498 (700)
T KOG2137|consen 420 IDVPFVKQAILPRLKNLAFKTTNLYVKVNVLPCLAGLIQRLDKAAVLDELLPILKC-IKTRDPAIVMGFLRIYEALALII 498 (700)
T ss_pred ccHHHHHHHHHHHhhcchhcccchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH-hcCCCcHHHHHHHHHHHHHHhhc
Confidence 87767778899999886 45678899999999999999888877677777776554 44557777777766666655332
Q ss_pred h--hhhHHhhHHHHHhhhcCCCCccHHHHH
Q psy14014 577 E--TNVIQSQVKPALDKLNGDTDVDVKYFA 604 (615)
Q Consensus 577 ~--~~~~~~~~~~~l~~l~~d~d~~v~~~a 604 (615)
. .....+.+.|.+--|..-+-..+.+++
T Consensus 499 ~~g~ev~~~~VlPlli~ls~~~~L~~~Qy~ 528 (700)
T KOG2137|consen 499 YSGVEVMAENVLPLLIPLSVAPSLNGEQYN 528 (700)
T ss_pred ccceeeehhhhhhhhhhhhhcccccHHHHH
Confidence 2 245566677777666433334444443
No 93
>PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1
Probab=98.46 E-value=1.2e-05 Score=70.80 Aligned_cols=166 Identities=16% Similarity=0.055 Sum_probs=116.0
Q ss_pred CchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCc
Q psy14014 441 KWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNY 520 (615)
Q Consensus 441 ~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~ 520 (615)
++.+|..++.+++.++..++. ..+..+|.+...|.|+++.||..|+.++..+... +.-.....++..++..+.|+++
T Consensus 1 ~~~vR~n~i~~l~DL~~r~~~--~ve~~~~~l~~~L~D~~~~VR~~al~~Ls~Li~~-d~ik~k~~l~~~~l~~l~D~~~ 77 (178)
T PF12717_consen 1 DPSVRNNAIIALGDLCIRYPN--LVEPYLPNLYKCLRDEDPLVRKTALLVLSHLILE-DMIKVKGQLFSRILKLLVDENP 77 (178)
T ss_pred CHHHHHHHHHHHHHHHHhCcH--HHHhHHHHHHHHHCCCCHHHHHHHHHHHHHHHHc-CceeehhhhhHHHHHHHcCCCH
Confidence 356899999999999887764 3566888999999999999999999999999864 3222335566788888999999
Q ss_pred hHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCC-C----chHHHHHHHHHHHHhHhhh-hhhHHhhHHHHHhhhcC
Q psy14014 521 LHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDN-V----ANVRFNVAKTLQKIGPILE-TNVIQSQVKPALDKLNG 594 (615)
Q Consensus 521 ~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~-~----~~vr~~a~~~l~~l~~~~~-~~~~~~~~~~~l~~l~~ 594 (615)
.+|..|..++..+....++..+.+.+.+.+..+-.-. . +.-+..-...+..+...++ ++.-...+..++.++..
T Consensus 78 ~Ir~~A~~~~~e~~~~~~~~~i~~~~~e~i~~l~~~~~~~~~~~~~~~~~~~I~~fll~~i~~d~~~~~l~~kl~~~~~~ 157 (178)
T PF12717_consen 78 EIRSLARSFFSELLKKRNPNIIYNNFPELISSLNNCYEHPVYGPLSREKRKKIYKFLLDFIDKDKQKESLVEKLCQRFLN 157 (178)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhCccccccccccCHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999988777766666666555543321 1 1223334444555555555 33334445555555533
Q ss_pred ---CCCccHHHHHHHHHH
Q psy14014 595 ---DTDVDVKYFAQEAIS 609 (615)
Q Consensus 595 ---d~d~~v~~~a~~a~~ 609 (615)
+.++.+...+..++.
T Consensus 158 ~~~~~~~~~~~d~~~~l~ 175 (178)
T PF12717_consen 158 AVVDEDERVLRDILYCLS 175 (178)
T ss_pred HcccccHHHHHHHHHHHH
Confidence 337777777766654
No 94
>PF05804 KAP: Kinesin-associated protein (KAP)
Probab=98.44 E-value=0.00041 Score=73.27 Aligned_cols=371 Identities=14% Similarity=0.171 Sum_probs=212.4
Q ss_pred HHHhCCCChHHHHHHHHhHHHHHHHhch--hhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChh--hHHHhHHH
Q psy14014 173 RNLCQDDTPMVRRAAAGKLGELAKVVEV--DYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQS--DVEQLVMP 248 (615)
Q Consensus 173 ~~l~~d~~~~vR~~a~~~l~~l~~~~~~--~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~--~~~~~l~~ 248 (615)
..++...+.-.| .+...|..++..... ......+++.+.++++.++.++...++.++..++-.-... .....++|
T Consensus 256 ~~l~~kQeqLlr-v~~~lLlNLAed~~ve~kM~~~~iV~~Lv~~Ldr~n~ellil~v~fLkkLSi~~ENK~~m~~~giV~ 334 (708)
T PF05804_consen 256 QTLIRKQEQLLR-VAFYLLLNLAEDPRVELKMVNKGIVSLLVKCLDRENEELLILAVTFLKKLSIFKENKDEMAESGIVE 334 (708)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHhcChHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHH
Confidence 333344343444 445556666654322 3345679999999999888899998888888876443322 22345889
Q ss_pred HHHHhcCCCChHHHHHHHHHHHHHHHHh--CccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHH
Q psy14014 249 TLRQCSGDTSWRVRYMVADKFTDLQKAV--GPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMT 326 (615)
Q Consensus 249 ~l~~~~~d~~~~vR~~~~~~l~~l~~~~--~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~ 326 (615)
.+.+++..++..++..+...|.+++..- ...+....++|.+..+++|++ .|..++..|..++. ..+.+.-...+
T Consensus 335 kL~kLl~s~~~~l~~~aLrlL~NLSfd~~~R~~mV~~GlIPkLv~LL~d~~--~~~val~iLy~LS~--dd~~r~~f~~T 410 (708)
T PF05804_consen 335 KLLKLLPSENEDLVNVALRLLFNLSFDPELRSQMVSLGLIPKLVELLKDPN--FREVALKILYNLSM--DDEARSMFAYT 410 (708)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHhCcCHHHHHHHHHCCCcHHHHHHhCCCc--hHHHHHHHHHHhcc--CHhhHHHHhhc
Confidence 9999999888899999999998887421 122334468899999998764 45556666665554 22222223334
Q ss_pred hhHHHHHHh-hCCCCHHHHHHHHHHHHhhchhhcc-hhh-hhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHH
Q psy14014 327 YILPYVKDL-VADPNQHVKSALASVIMGLSPILGK-HNT-VDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWR 403 (615)
Q Consensus 327 ~l~p~l~~~-~~d~~~~vR~~~~~~l~~l~~~~g~-~~~-~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~ 403 (615)
..+|.+.++ +..++.++...++..+.+++..-.. +.. ....++.+.+..-.....+-...++.++ ..-|. .
T Consensus 411 dcIp~L~~~Ll~~~~~~v~~eliaL~iNLa~~~rnaqlm~~g~gL~~L~~ra~~~~D~lLlKlIRNiS---~h~~~---~ 484 (708)
T PF05804_consen 411 DCIPQLMQMLLENSEEEVQLELIALLINLALNKRNAQLMCEGNGLQSLMKRALKTRDPLLLKLIRNIS---QHDGP---L 484 (708)
T ss_pred chHHHHHHHHHhCCCccccHHHHHHHHHHhcCHHHHHHHHhcCcHHHHHHHHHhcccHHHHHHHHHHH---hcCch---H
Confidence 567877664 4456667766666666666543211 111 1123444443322211222222222222 11111 1
Q ss_pred HHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhh--ChHh--HH--HHHHHHHHHhcC
Q psy14014 404 VRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQL--GVEF--FD--EKLNALCMTWLV 477 (615)
Q Consensus 404 ~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~--~~~~--~~--~~l~~~l~~~l~ 477 (615)
+. .+.++++ .+...+..++ --...+++++.++... +.++ +. ..++|.+.+.+.
T Consensus 485 k~-~f~~~i~------------------~L~~~v~~~~--~ee~~vE~LGiLaNL~~~~ld~~~ll~~~~llp~L~~~L~ 543 (708)
T PF05804_consen 485 KE-LFVDFIG------------------DLAKIVSSGD--SEEFVVECLGILANLTIPDLDWAQLLQEYNLLPWLKDLLK 543 (708)
T ss_pred HH-HHHHHHH------------------HHHHHhhcCC--cHHHHHHHHHHHHhcccCCcCHHHHHHhCCHHHHHHHHhC
Confidence 11 1122231 2223333222 1245677777776432 2122 22 358888888876
Q ss_pred Cc--chHHHHHHHHHHHHHHHHhCh--HHhhhchhHHHHhhhcCC--CchHHHHHHHHHHHHHhhhChh-hH--HHhhHH
Q psy14014 478 DH--VYAIREAATLNLKKLVEQFGS--EWAQSTVIPKVVAMSRDQ--NYLHRMTCLFCINVLAEACGPT-VT--ANFLLP 548 (615)
Q Consensus 478 d~--~~~vR~~a~~~l~~l~~~~~~--~~~~~~i~~~l~~~~~d~--~~~~R~~a~~~l~~l~~~~~~~-~~--~~~i~~ 548 (615)
.. ...+...++..+|.++..-.. -.....+++.+.++++.. +...-.-.++++..+..+-... .+ ...+..
T Consensus 544 ~g~~~dDl~LE~Vi~~gtla~d~~~A~lL~~sgli~~Li~LL~~kqeDdE~VlQil~~f~~ll~h~~tr~~ll~~~~~~~ 623 (708)
T PF05804_consen 544 PGASEDDLLLEVVILLGTLASDPECAPLLAKSGLIPTLIELLNAKQEDDEIVLQILYVFYQLLFHEETREVLLKETEIPA 623 (708)
T ss_pred CCCCChHHHHHHHHHHHHHHCCHHHHHHHHhCChHHHHHHHHHhhCchHHHHHHHHHHHHHHHcChHHHHHHHhccchHH
Confidence 43 345777777888877642111 112245788888877654 2333344666777776542211 11 245778
Q ss_pred HHHhhCCCCCchHHHHHHHHHHHHhHh
Q psy14014 549 TVLNMAGDNVANVRFNVAKTLQKIGPI 575 (615)
Q Consensus 549 ~l~~~~~D~~~~vr~~a~~~l~~l~~~ 575 (615)
.+..++.|+++.||..+-.+|.-+..+
T Consensus 624 ylidL~~d~N~~ir~~~d~~Ldii~e~ 650 (708)
T PF05804_consen 624 YLIDLMHDKNAEIRKVCDNALDIIAEY 650 (708)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999888754
No 95
>KOG1293|consensus
Probab=98.43 E-value=0.0016 Score=65.80 Aligned_cols=135 Identities=13% Similarity=0.150 Sum_probs=104.1
Q ss_pred CCchHHHHHHHHhHHHHhhh---ChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhCh---HHhhhchhHHHHh
Q psy14014 440 SKWRVRLAIIEYMPLLAGQL---GVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGS---EWAQSTVIPKVVA 513 (615)
Q Consensus 440 ~~~~vr~~~~~~l~~l~~~~---~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~---~~~~~~i~~~l~~ 513 (615)
++..++.+++..+..+.... ....-...+...+.+.+.|+...|..+++.++.+++-.||+ .+.....+..+..
T Consensus 389 kd~~~~aaa~l~~~s~srsV~aL~tg~~~~dv~~plvqll~dp~~~i~~~~lgai~NlVmefs~~kskfl~~ngId~l~s 468 (678)
T KOG1293|consen 389 KDHDFVAAALLCLKSFSRSVSALRTGLKRNDVAQPLVQLLMDPEIMIMGITLGAICNLVMEFSNLKSKFLRNNGIDILES 468 (678)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcCCccchhHHHHHHHhhCcchhHHHHHHHHHHHHHhhcccHHHHHHHcCcHHHHHH
Confidence 45557888888877776533 22233345666678888999999999999999999998876 3444568899999
Q ss_pred hhcCCCchHHHHHHHHHHHHHhhhChhhHH----HhhHHHHHhhCCCCCchHHHHHHHHHHHHhH
Q psy14014 514 MSRDQNYLHRMTCLFCINVLAEACGPTVTA----NFLLPTVLNMAGDNVANVRFNVAKTLQKIGP 574 (615)
Q Consensus 514 ~~~d~~~~~R~~a~~~l~~l~~~~~~~~~~----~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~ 574 (615)
+..++.+++|..+.+++..+.-.++..+.. ..-...+..+.+|++..|...+.+.|+++.-
T Consensus 469 ~~~~~~~n~r~~~~~~Lr~l~f~~de~~k~~~~~ki~a~~i~~l~nd~d~~Vqeq~fqllRNl~c 533 (678)
T KOG1293|consen 469 MLTDPDFNSRANSLWVLRHLMFNCDEEEKFQLLAKIPANLILDLINDPDWAVQEQCFQLLRNLTC 533 (678)
T ss_pred HhcCCCchHHHHHHHHHHHHHhcchHHHHHHHHHHhhHHHHHHHHhCCCHHHHHHHHHHHHHhhc
Confidence 999999999999999999998776654421 2234456667899999999999999988854
No 96
>KOG1293|consensus
Probab=98.42 E-value=0.0019 Score=65.31 Aligned_cols=419 Identities=14% Similarity=0.034 Sum_probs=214.1
Q ss_pred CCCChHHHHHHHHhHHHHHHHhch---hhhHhhhHHHHHHhhccCc-hhHHHHHHHHHHHHHhhcChh-----hHHHhHH
Q psy14014 177 QDDTPMVRRAAAGKLGELAKVVEV---DYLKTDIIPMFVNLAQDEQ-DSVRLLAVEACVSIASLLSQS-----DVEQLVM 247 (615)
Q Consensus 177 ~d~~~~vR~~a~~~l~~l~~~~~~---~~~~~~ll~~l~~~~~d~~-~~vr~~a~~~l~~l~~~~~~~-----~~~~~l~ 247 (615)
.|.+.++.......++..+..-.. +......++.+.+++.+.+ ..++...+.++.++.+..+.. .....++
T Consensus 63 e~~s~~~k~~~~~llns~f~~eqd~v~svL~~~~ll~Ll~LLs~sD~~~~le~~l~~lR~Ifet~~~q~~~~s~~~~sIi 142 (678)
T KOG1293|consen 63 EDGSTELKNGFAVLLNSLFLGEQDKVDSVLRIIELLKLLQLLSESDSLNVLEKTLRCLRTIFETSKYQDKKMSLHLKSII 142 (678)
T ss_pred cCCchhhhhhHHHHHHhHHhhccchHHHHHHHhhHHHHHHHhcCcchHhHHHHHHHHHHHHHhcccccccchhhhHHHHH
Confidence 455666776666666665543221 2334556777788888777 889999999999888776432 1223455
Q ss_pred HHHHHhcCCC-ChHHHHHHHHHHHHHHHHhCcc-c-hhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccch-h--
Q psy14014 248 PTLRQCSGDT-SWRVRYMVADKFTDLQKAVGPE-I-TKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQ-E-- 321 (615)
Q Consensus 248 ~~l~~~~~d~-~~~vR~~~~~~l~~l~~~~~~~-~-~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~-~-- 321 (615)
+.+..+.+.+ ....+..+.. ....+..-..+ . ....+...+.-++......+|.+|...+..-+..+-+... .
T Consensus 143 ~~~s~l~s~~lk~~~~l~~~~-~a~~s~~~~hq~Il~Na~i~ekI~~l~~~~s~~~RlaaL~~~sr~~~iL~Nn~~~sm~ 221 (678)
T KOG1293|consen 143 VKFSLLYSIELKYISRLDVSR-AAHLSSTKDHQLILCNAGILEKINILLMYLSSKLRLAALLCLSRGDRILRNNPLGSMF 221 (678)
T ss_pred HHHHHHHhhhhhhhhhhhhhh-hccccccchhhheeccccchhhHHHHHHhhhHHHHHHHHHHhhccceeeecCchhHHH
Confidence 5555444422 1112221111 01111000000 0 0112233333333444567788888888842222211110 0
Q ss_pred ---HHHHHhhHH--HHHHhhCCCCHHHHHHHHHHHHhhchhhc-chh------hh----hhhHHHH-HHhhcCCChhHHH
Q psy14014 322 ---NIIMTYILP--YVKDLVADPNQHVKSALASVIMGLSPILG-KHN------TV----DHLLPLF-LSQLKDECPEVRL 384 (615)
Q Consensus 322 ---~~~~~~l~p--~l~~~~~d~~~~vR~~~~~~l~~l~~~~g-~~~------~~----~~l~p~l-~~~l~d~~~~vr~ 384 (615)
......+.+ .+.++..|++..-|...+.++..+...-. .+. +. ..+.... ...+.++-+.--.
T Consensus 222 ~l~~L~d~~v~~r~~v~rL~k~~~~s~~l~sl~cl~~~~~~s~~~d~l~~~~~~~dmgd~~i~q~~~i~l~~~P~~s~l~ 301 (678)
T KOG1293|consen 222 LLGLLKDKGVNIRCVVTRLLKDPDFSERLRSLECLVPYLRKSFNYDPLPWWFIFFDMGDSLIVQYNCIVLMNDPGLSTLD 301 (678)
T ss_pred HHHHHhccccchhhhhhhhhhCCCccHHHHHHHHHHHHHhccccccccccceeeccCchHHHHHHhhheeecCCceeehh
Confidence 011122333 34567788888888777777766543211 110 00 0111111 1112222111111
Q ss_pred HHHHhhhHhhhhhchhHHHHHH-HHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHH---HHhhhC
Q psy14014 385 NIISNLDCVNEVIGIQQWRVRL-AIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPL---LAGQLG 460 (615)
Q Consensus 385 ~a~~~l~~l~~~~~~~~~~~~~-~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~---l~~~~~ 460 (615)
.+...++-..+....-...++. ...+.++.+ + -+..-+.....+.|.-++.-... ++...|
T Consensus 302 ~~~~l~c~~a~~~sklq~~~~e~~~~~~~~el------------l---f~~~sl~a~~~~~~~i~l~e~~i~~~~~~~~~ 366 (678)
T KOG1293|consen 302 HTNVLFCILARFASKLQLPQHEEATLKTTTEL------------L---FICASLAASDEKYRLILLNETLILNHLEYGLE 366 (678)
T ss_pred hhhhhHHHHHHHHHhhhhHHhhhhhhhhHHHH------------H---HHHHHHhhcchhhhHHHhhhhhhhhhhhhhcc
Confidence 1111111111111110001110 000111100 0 01111223334444433332111 111111
Q ss_pred h----HhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhC---hHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHH
Q psy14014 461 V----EFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFG---SEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVL 533 (615)
Q Consensus 461 ~----~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~---~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l 533 (615)
. ++........++...-..+..++.+|+.++..+..... ......++...+.+++.||+..+...+..++.++
T Consensus 367 i~~~k~~l~~~t~~~l~~~~~~kd~~~~aaa~l~~~s~srsV~aL~tg~~~~dv~~plvqll~dp~~~i~~~~lgai~Nl 446 (678)
T KOG1293|consen 367 ISLKKEILETTTESHLMCLPPIKDHDFVAAALLCLKSFSRSVSALRTGLKRNDVAQPLVQLLMDPEIMIMGITLGAICNL 446 (678)
T ss_pred hhHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcCCccchhHHHHHHHhhCcchhHHHHHHHHHHHH
Confidence 1 11112223333333344577888999998888776542 2223346778888888999999999999999998
Q ss_pred HhhhCh---hhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhh----hHHhhHHHHHhhhcCCCCccHHHHHHH
Q psy14014 534 AEACGP---TVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETN----VIQSQVKPALDKLNGDTDVDVKYFAQE 606 (615)
Q Consensus 534 ~~~~~~---~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~----~~~~~~~~~l~~l~~d~d~~v~~~a~~ 606 (615)
.-.+++ .+........+..+..|+++++|..+.++|..+.-..+.. .........+..+.+|+|..|.+-+.+
T Consensus 447 Vmefs~~kskfl~~ngId~l~s~~~~~~~n~r~~~~~~Lr~l~f~~de~~k~~~~~ki~a~~i~~l~nd~d~~Vqeq~fq 526 (678)
T KOG1293|consen 447 VMEFSNLKSKFLRNNGIDILESMLTDPDFNSRANSLWVLRHLMFNCDEEEKFQLLAKIPANLILDLINDPDWAVQEQCFQ 526 (678)
T ss_pred HhhcccHHHHHHHcCcHHHHHHHhcCCCchHHHHHHHHHHHHHhcchHHHHHHHHHHhhHHHHHHHHhCCCHHHHHHHHH
Confidence 766554 3345678899999999999999999999999987544322 223334555666789999999999988
Q ss_pred HHHHH
Q psy14014 607 AISSI 611 (615)
Q Consensus 607 a~~~~ 611 (615)
-+..+
T Consensus 527 llRNl 531 (678)
T KOG1293|consen 527 LLRNL 531 (678)
T ss_pred HHHHh
Confidence 87765
No 97
>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A.
Probab=98.41 E-value=2.1e-06 Score=65.99 Aligned_cols=86 Identities=24% Similarity=0.375 Sum_probs=69.6
Q ss_pred HHHHHHhh-cCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhh
Q psy14014 286 VQAFQMLL-KDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTV 364 (615)
Q Consensus 286 ~~~l~~~l-~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~ 364 (615)
+|.+.+.+ +|+++.+|..++..|+.+.. +..+|.+.++++|+++.||..++.+++.+..
T Consensus 1 i~~L~~~l~~~~~~~vr~~a~~~L~~~~~------------~~~~~~L~~~l~d~~~~vr~~a~~aL~~i~~-------- 60 (88)
T PF13646_consen 1 IPALLQLLQNDPDPQVRAEAARALGELGD------------PEAIPALIELLKDEDPMVRRAAARALGRIGD-------- 60 (88)
T ss_dssp HHHHHHHHHTSSSHHHHHHHHHHHHCCTH------------HHHHHHHHHHHTSSSHHHHHHHHHHHHCCHH--------
T ss_pred CHHHHHHHhcCCCHHHHHHHHHHHHHcCC------------HhHHHHHHHHHcCCCHHHHHHHHHHHHHhCC--------
Confidence 46677777 89999999999999995432 4678999999999999999999999998742
Q ss_pred hhhHHHHHHhhcCC-ChhHHHHHHHhhh
Q psy14014 365 DHLLPLFLSQLKDE-CPEVRLNIISNLD 391 (615)
Q Consensus 365 ~~l~p~l~~~l~d~-~~~vr~~a~~~l~ 391 (615)
+..+|.+.+.+.++ +..||..|+.+|+
T Consensus 61 ~~~~~~L~~~l~~~~~~~vr~~a~~aL~ 88 (88)
T PF13646_consen 61 PEAIPALIKLLQDDDDEVVREAAAEALG 88 (88)
T ss_dssp HHTHHHHHHHHTC-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcHHHHHHHHhhcC
Confidence 45788889988764 5667999988764
No 98
>KOG0414|consensus
Probab=98.39 E-value=0.0062 Score=65.88 Aligned_cols=159 Identities=13% Similarity=0.097 Sum_probs=115.6
Q ss_pred HHHHhHHHHh---hhChHhHHHHHHHHHHHhcCC----cchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhc-CCC
Q psy14014 448 IIEYMPLLAG---QLGVEFFDEKLNALCMTWLVD----HVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSR-DQN 519 (615)
Q Consensus 448 ~~~~l~~l~~---~~~~~~~~~~l~~~l~~~l~d----~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~-d~~ 519 (615)
..+.+..++. .+|++.....+.|.+...+.. .++.++.+|.-+++.+... +.+ +...-+|.+...++ .++
T Consensus 897 ~~d~i~~icE~eLl~gek~lLg~f~piv~e~c~n~~~~sdp~Lq~AAtLaL~klM~i-Sa~-fces~l~llftimeksp~ 974 (1251)
T KOG0414|consen 897 LADLISGICEKELLYGEKSLLGRFAPIVVEGCRNPGLFSDPELQAAATLALGKLMCI-SAE-FCESHLPLLFTIMEKSPS 974 (1251)
T ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHhcCCCcCCCHHHHHHHHHHHHHHhhh-hHH-HHHHHHHHHHHHHhcCCC
Confidence 4455555554 346555667788888887743 4688999999999998753 333 44566888888665 899
Q ss_pred chHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHHHHhhhcCCCCcc
Q psy14014 520 YLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKLNGDTDVD 599 (615)
Q Consensus 520 ~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~l~~d~d~~ 599 (615)
+.+|.+++-++|.++-.++. +.+...+.|.+.+.|+++.||.++..+|..++-. +--....++-.+..+ +.|+++.
T Consensus 975 p~IRsN~VvalgDlav~fpn--lie~~T~~Ly~rL~D~~~~vRkta~lvlshLILn-dmiKVKGql~eMA~c-l~D~~~~ 1050 (1251)
T KOG0414|consen 975 PRIRSNLVVALGDLAVRFPN--LIEPWTEHLYRRLRDESPSVRKTALLVLSHLILN-DMIKVKGQLSEMALC-LEDPNAE 1050 (1251)
T ss_pred ceeeecchheccchhhhccc--ccchhhHHHHHHhcCccHHHHHHHHHHHHHHHHh-hhhHhcccHHHHHHH-hcCCcHH
Confidence 99999999999999865542 2355678888899999999999999999998742 111112234444444 4899999
Q ss_pred HHHHHHHHHHHHh
Q psy14014 600 VKYFAQEAISSIA 612 (615)
Q Consensus 600 v~~~a~~a~~~~~ 612 (615)
++..|..-++-+.
T Consensus 1051 IsdlAk~FF~Els 1063 (1251)
T KOG0414|consen 1051 ISDLAKSFFKELS 1063 (1251)
T ss_pred HHHHHHHHHHHhh
Confidence 9999997777654
No 99
>KOG2274|consensus
Probab=98.39 E-value=0.005 Score=64.62 Aligned_cols=175 Identities=11% Similarity=0.050 Sum_probs=110.0
Q ss_pred hhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHh---hhchhHHHHh
Q psy14014 437 AEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWA---QSTVIPKVVA 513 (615)
Q Consensus 437 ~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~---~~~i~~~l~~ 513 (615)
..+...-+|..++..+...++.---..+.+.++..+.++..+...++-..-.++++.+++. .+++. ...+.|-+..
T Consensus 500 ~~~~~~~~ki~a~~~~~~~~~~~vl~~~~p~ild~L~qlas~~s~evl~llmE~Ls~vv~~-dpef~as~~skI~P~~i~ 578 (1005)
T KOG2274|consen 500 TMDVPPPVKISAVRAFCGYCKVKVLLSLQPMILDGLLQLASKSSDEVLVLLMEALSSVVKL-DPEFAASMESKICPLTIN 578 (1005)
T ss_pred ccCCCCchhHHHHHHHHhccCceeccccchHHHHHHHHHcccccHHHHHHHHHHHHHHhcc-ChhhhhhhhcchhHHHHH
Confidence 3466667888888877666532211224567777778888888888888888888887764 33322 2447776666
Q ss_pred hh--cCCCchHHHHHHHHHHHHHh---hhChhhHHHhhHHHHHhhCCCCC----chHHHHHHHHHHHHhHhhhhh---hH
Q psy14014 514 MS--RDQNYLHRMTCLFCINVLAE---ACGPTVTANFLLPTVLNMAGDNV----ANVRFNVAKTLQKIGPILETN---VI 581 (615)
Q Consensus 514 ~~--~d~~~~~R~~a~~~l~~l~~---~~~~~~~~~~i~~~l~~~~~D~~----~~vr~~a~~~l~~l~~~~~~~---~~ 581 (615)
.+ ...+|.+-..+-.++..+.. +.|+ ..+..+|.+..-+.-++ +.....++..|..+...-+++ .+
T Consensus 579 lF~k~s~DP~V~~~~qd~f~el~q~~~~~g~--m~e~~iPslisil~~~~~~~~~~l~~~aidvLttvvr~tp~pL~~~l 656 (1005)
T KOG2274|consen 579 LFLKYSEDPQVASLAQDLFEELLQIAANYGP--MQERLIPSLISVLQLNADKAPAGLCAIAIDVLTTVLRNTPSPLPNLL 656 (1005)
T ss_pred HHHHhcCCchHHHHHHHHHHHHHHHHHhhcc--hHHHHHHHHHHHHcCcccccCchhhHHHHHHHHHHHhcCCCCccHHH
Confidence 32 23344554445455555544 2332 35677888887665444 445556677777676655432 33
Q ss_pred H-hhHHHHHhhhcCCCCccHHHHHHHHHHHHhhc
Q psy14014 582 Q-SQVKPALDKLNGDTDVDVKYFAQEAISSIADS 614 (615)
Q Consensus 582 ~-~~~~~~l~~l~~d~d~~v~~~a~~a~~~~~~~ 614 (615)
. ..+.++.+..++..|-.+-+++.++++.+-++
T Consensus 657 ~~~~FpaVak~tlHsdD~~tlQ~~~EcLra~Is~ 690 (1005)
T KOG2274|consen 657 ICYAFPAVAKITLHSDDHETLQNATECLRALISV 690 (1005)
T ss_pred HHHHhHHhHhheeecCChHHHHhHHHHHHHHHhc
Confidence 3 34555556667888999999999999987654
No 100
>KOG0567|consensus
Probab=98.35 E-value=4.9e-05 Score=67.70 Aligned_cols=233 Identities=16% Similarity=0.220 Sum_probs=137.2
Q ss_pred HHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCC--CCHHHHHHHHHHHHhhchhhcchhh
Q psy14014 286 VQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVAD--PNQHVKSALASVIMGLSPILGKHNT 363 (615)
Q Consensus 286 ~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d--~~~~vR~~~~~~l~~l~~~~g~~~~ 363 (615)
+..+.+...|.....+...+..|+++.. ...+|.+...+.| ..+.||..++++++.+..
T Consensus 38 i~~i~ka~~d~s~llkhe~ay~LgQ~~~------------~~Av~~l~~vl~desq~pmvRhEAaealga~~~------- 98 (289)
T KOG0567|consen 38 IKAITKAFIDDSALLKHELAYVLGQMQD------------EDAVPVLVEVLLDESQEPMVRHEAAEALGAIGD------- 98 (289)
T ss_pred HHHHHHhcccchhhhccchhhhhhhhcc------------chhhHHHHHHhcccccchHHHHHHHHHHHhhcc-------
Confidence 4445555555555556667777776544 4467777776665 468999999999988752
Q ss_pred hhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHH-HHhhhhhhhhccccc-hhhhhhhhHHHHHhhhcCC
Q psy14014 364 VDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLA-IIEYMPLLAGQLGVE-FFDEKLNALSIVELAEDSK 441 (615)
Q Consensus 364 ~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~-i~~~l~~l~~~~~~~-~~~~~l~~~~i~~~~~~~~ 441 (615)
+...+.+.+..+|+..+|+..+.-++..+- |....+ +.+..|..+..-... -+.+ + ..+...+.|.+
T Consensus 99 -~~~~~~l~k~~~dp~~~v~ETc~lAi~rle-------~~~~~~~~~~~~p~~SvdPa~p~~~ss-v--~~lr~~lld~t 167 (289)
T KOG0567|consen 99 -PESLEILTKYIKDPCKEVRETCELAIKRLE-------WKDIIDKIANSSPYISVDPAPPANLSS-V--HELRAELLDET 167 (289)
T ss_pred -hhhHHHHHHHhcCCccccchHHHHHHHHHH-------HhhccccccccCccccCCCCCcccccc-H--HHHHHHHHhcc
Confidence 235677777778888888887666665542 222110 000011111000000 0000 0 11122222211
Q ss_pred c--hHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcC--
Q psy14014 442 W--RVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRD-- 517 (615)
Q Consensus 442 ~--~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d-- 517 (615)
. --|..+.-.+..+ |.+ .-+..+.+.+.+++.-.|..+..++|++-. +.-+|.|.+.+.|
T Consensus 168 ~~l~~Ry~amF~LRn~----g~E----eaI~al~~~l~~~SalfrhEvAfVfGQl~s--------~~ai~~L~k~L~d~~ 231 (289)
T KOG0567|consen 168 KPLFERYRAMFYLRNI----GTE----EAINALIDGLADDSALFRHEVAFVFGQLQS--------PAAIPSLIKVLLDET 231 (289)
T ss_pred hhHHHHHhhhhHhhcc----CcH----HHHHHHHHhcccchHHHHHHHHHHHhhccc--------hhhhHHHHHHHHhhh
Confidence 1 1122333333222 222 233445666777788889998888888742 3456777776654
Q ss_pred CCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHH
Q psy14014 518 QNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKI 572 (615)
Q Consensus 518 ~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l 572 (615)
.++.+|..|+.+||.++. +..++.|.+++.|+++-||..+.-+|..+
T Consensus 232 E~pMVRhEaAeALGaIa~--------e~~~~vL~e~~~D~~~vv~esc~valdm~ 278 (289)
T KOG0567|consen 232 EHPMVRHEAAEALGAIAD--------EDCVEVLKEYLGDEERVVRESCEVALDML 278 (289)
T ss_pred cchHHHHHHHHHHHhhcC--------HHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 488899999999999862 34678888889999999998888877655
No 101
>KOG0168|consensus
Probab=98.35 E-value=0.0013 Score=68.18 Aligned_cols=154 Identities=10% Similarity=0.023 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHhCC-CChHHHHHHHHhHHHHHHHhchhh---hHhhhHHHHHHhhc-cCchhHHHHHHHHHHHHHhhcCh
Q psy14014 165 KAELRSHFRNLCQD-DTPMVRRAAAGKLGELAKVVEVDY---LKTDIIPMFVNLAQ-DEQDSVRLLAVEACVSIASLLSQ 239 (615)
Q Consensus 165 ~~~l~~~l~~l~~d-~~~~vR~~a~~~l~~l~~~~~~~~---~~~~ll~~l~~~~~-d~~~~vr~~a~~~l~~l~~~~~~ 239 (615)
.+.+.|.+..++++ .++++...||+++..+++.++... .....+|+|.+-+. =+.-.|.+.+++++..+.+.=+.
T Consensus 209 v~slvp~Lv~LL~~E~n~DIMl~AcRaltyl~evlP~S~a~vV~~~aIPvl~~kL~~IeyiDvAEQ~LqALE~iSR~H~~ 288 (1051)
T KOG0168|consen 209 VKSLVPVLVALLSHEHNFDIMLLACRALTYLCEVLPRSSAIVVDEHAIPVLLEKLLTIEYIDVAEQSLQALEKISRRHPK 288 (1051)
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhccchhheeecccchHHHHHhhhhhhhhHHHHHHHHHHHHHHhhccH
Confidence 46677888888877 578999999999999999987632 23457777765443 35667899999999998877666
Q ss_pred hhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccch--hhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccc
Q psy14014 240 SDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEIT--KTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDA 317 (615)
Q Consensus 240 ~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~--~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~ 317 (615)
......-+-.+..+++-=+..+.+.++....+.+..+..+.. .-+.+|+|..+++..+..+-+.++-++..++..+..
T Consensus 289 AiL~AG~l~a~LsylDFFSi~aQR~AlaiaaN~Cksi~sd~f~~v~ealPlL~~lLs~~D~k~ies~~ic~~ri~d~f~h 368 (1051)
T KOG0168|consen 289 AILQAGALSAVLSYLDFFSIHAQRVALAIAANCCKSIRSDEFHFVMEALPLLTPLLSYQDKKPIESVCICLTRIADGFQH 368 (1051)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhccc
Confidence 544443333344444333445667777677777777665532 347889999999999988888899999888887654
Q ss_pred c
Q psy14014 318 Y 318 (615)
Q Consensus 318 ~ 318 (615)
.
T Consensus 369 ~ 369 (1051)
T KOG0168|consen 369 G 369 (1051)
T ss_pred C
Confidence 3
No 102
>KOG1992|consensus
Probab=98.34 E-value=0.0059 Score=63.41 Aligned_cols=172 Identities=15% Similarity=0.209 Sum_probs=102.8
Q ss_pred cCCchHHHHHHHHhHHHHhhh-----C----------hHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHh
Q psy14014 439 DSKWRVRLAIIEYMPLLAGQL-----G----------VEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWA 503 (615)
Q Consensus 439 ~~~~~vr~~~~~~l~~l~~~~-----~----------~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~ 503 (615)
+.+|+-+..++..+..++... | .++|...+.|.+..-=..+.+-+|..+++-+..+-+.+|+...
T Consensus 417 S~nWk~kd~aiyL~talaik~~t~~~Gvtstn~lvdv~~Ff~~~ilp~L~s~~vn~~pilka~aIKy~~~FR~ql~~~~l 496 (960)
T KOG1992|consen 417 SGNWKKKDRAIYLVTALAIKGQTAKHGVTSTNELVDVVDFFANQILPDLLSPNVNEFPILKADAIKYIYTFRNQLGKEHL 496 (960)
T ss_pred CccccccchhhhhhHHHHhhcchhhcceeeccccccHHHHHHHHhhHHhccCccccccchhhcccceeeeecccCChHHH
Confidence 468999988888888887542 1 2345555666554433345677888888887777777776633
Q ss_pred hhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhCh--------hhHHHhhHHHHHhh---CCCCCchHHHHHHHHHHHH
Q psy14014 504 QSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGP--------TVTANFLLPTVLNM---AGDNVANVRFNVAKTLQKI 572 (615)
Q Consensus 504 ~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~--------~~~~~~i~~~l~~~---~~D~~~~vr~~a~~~l~~l 572 (615)
-..+|.+.+.++.+++.+...|+.++..+.-..+. ....+++.+.+..+ ++-+...=-...++++-++
T Consensus 497 -m~~~p~li~~L~a~s~vvhsYAA~aiEkil~vre~~~~~if~~~~iap~~~~ll~nLf~a~s~p~~~EneylmKaImRi 575 (960)
T KOG1992|consen 497 -MALLPRLIRFLEAESRVVHSYAAIAIEKLLTVRENSNAKIFGAEDIAPFVEILLTNLFKALSLPGKAENEYLMKAIMRI 575 (960)
T ss_pred -HHHHHHHHHhccCcchHHHHHHHHHHHhccccccCccccccchhhcchHHHHHHHHHHHhccCCcccccHHHHHHHHHH
Confidence 35899999999999999999999999988654333 22233333333333 3323333334566666666
Q ss_pred hHhhhh------hhHHhhHHHHHhhh-cCCCCccHHHHHHHHHHHH
Q psy14014 573 GPILET------NVIQSQVKPALDKL-NGDTDVDVKYFAQEAISSI 611 (615)
Q Consensus 573 ~~~~~~------~~~~~~~~~~l~~l-~~d~d~~v~~~a~~a~~~~ 611 (615)
+..... +.....+..++... .|-.++.--.+-.+.++.+
T Consensus 576 i~i~~~~i~p~~~~~l~~Lteiv~~v~KNPs~P~fnHYLFEsi~~l 621 (960)
T KOG1992|consen 576 ISILQSAIIPHAPELLRQLTEIVEEVSKNPSNPQFNHYLFESIGLL 621 (960)
T ss_pred HHhCHHhhhhhhhHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHH
Confidence 544321 11223333333333 3555666666655555544
No 103
>cd00020 ARM Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, the junctional plaque protein plakoglobin, the adenomatous polyposis coli (APC) tumor suppressor protein, and a number of other proteins. ARM has been implicated in mediating protein-protein interactions, but no common features among the target proteins recognized by the ARM repeats have been identified; related to the HEAT domain; three consecutive copies of the repeat are represented by this alignment model.
Probab=98.33 E-value=3.2e-06 Score=69.52 Aligned_cols=108 Identities=12% Similarity=0.146 Sum_probs=83.7
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhC---hHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChh--
Q psy14014 466 EKLNALCMTWLVDHVYAIREAATLNLKKLVEQFG---SEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPT-- 540 (615)
Q Consensus 466 ~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~---~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~-- 540 (615)
..+++.+.+++.+.++.+|..++.+++.++.... .......++|.+.+++.++++.+|..++.++++++...+..
T Consensus 6 ~~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~ 85 (120)
T cd00020 6 AGGLPALVSLLSSSDENVQREAAWALSNLSAGNNDNIQAVVEAGGLPALVQLLKSEDEEVVKAALWALRNLAAGPEDNKL 85 (120)
T ss_pred cCChHHHHHHHHcCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCChHHHHHHHhCCCHHHHHHHHHHHHHHccCcHHHHH
Confidence 3467778888888889999999999999886421 12233468899999999999999999999999998654321
Q ss_pred h-HHHhhHHHHHhhCCCCCchHHHHHHHHHHHHh
Q psy14014 541 V-TANFLLPTVLNMAGDNVANVRFNVAKTLQKIG 573 (615)
Q Consensus 541 ~-~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~ 573 (615)
. ....+++.+.+++.+.+..+|..++.+|.+++
T Consensus 86 ~~~~~g~l~~l~~~l~~~~~~~~~~a~~~l~~l~ 119 (120)
T cd00020 86 IVLEAGGVPKLVNLLDSSNEDIQKNATGALSNLA 119 (120)
T ss_pred HHHHCCChHHHHHHHhcCCHHHHHHHHHHHHHhh
Confidence 1 23457888888888888999999999988875
No 104
>PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1
Probab=98.32 E-value=8.5e-05 Score=65.42 Aligned_cols=108 Identities=20% Similarity=0.224 Sum_probs=75.1
Q ss_pred ChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCCh
Q psy14014 180 TPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSW 259 (615)
Q Consensus 180 ~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~ 259 (615)
++.||..++.++|.++...+. ..+..+|.+...++|+++.||+.|+.++..+... +.-.....++..+..++.|+++
T Consensus 1 ~~~vR~n~i~~l~DL~~r~~~--~ve~~~~~l~~~L~D~~~~VR~~al~~Ls~Li~~-d~ik~k~~l~~~~l~~l~D~~~ 77 (178)
T PF12717_consen 1 DPSVRNNAIIALGDLCIRYPN--LVEPYLPNLYKCLRDEDPLVRKTALLVLSHLILE-DMIKVKGQLFSRILKLLVDENP 77 (178)
T ss_pred CHHHHHHHHHHHHHHHHhCcH--HHHhHHHHHHHHHCCCCHHHHHHHHHHHHHHHHc-CceeehhhhhHHHHHHHcCCCH
Confidence 467888888888888877654 3455677888888888899999888888877543 1112233455666677788888
Q ss_pred HHHHHHHHHHHHHHHHhCccchhhhHHHHHH
Q psy14014 260 RVRYMVADKFTDLQKAVGPEITKTDLVQAFQ 290 (615)
Q Consensus 260 ~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~ 290 (615)
.||..+...|..+.....++.....+.+.+.
T Consensus 78 ~Ir~~A~~~~~e~~~~~~~~~i~~~~~e~i~ 108 (178)
T PF12717_consen 78 EIRSLARSFFSELLKKRNPNIIYNNFPELIS 108 (178)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 8999888888888876544443334444333
No 105
>KOG2062|consensus
Probab=98.28 E-value=8e-05 Score=75.57 Aligned_cols=263 Identities=16% Similarity=0.119 Sum_probs=155.9
Q ss_pred chhhhhhhcCCc-H-HHHHHHHHHhccccCCCCCcchhhhchHHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhH
Q psy14014 53 LIPFLTETIYDE-D-EVLLALAEQLGTFTPNVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHF 130 (615)
Q Consensus 53 ll~~l~~~~~~~-~-~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~ 130 (615)
...+|.+.+++. + .||..++--||-.. +|. .-..+...++..+-.++...-++|.-+++-++---.... .
T Consensus 414 ~~~yL~~~Lk~~~~e~v~hG~cLGlGLa~--mGS--a~~eiYe~lKevLy~D~AvsGEAAgi~MGl~mlGt~~~e----a 485 (929)
T KOG2062|consen 414 ITDYLLQQLKTAENEVVRHGACLGLGLAG--MGS--ANEEIYEKLKEVLYNDSAVSGEAAGIAMGLLMLGTANQE----A 485 (929)
T ss_pred HHHHHHHHHHhccchhhhhhhhhhccchh--ccc--ccHHHHHHHHHHHhccchhhhhHHHHhhhhHhhCcCcHH----H
Confidence 344444444433 3 48888876666432 221 224566667777777777777777777776543322221 1
Q ss_pred HHHHHHhhcCCCc--chhhhHHhhhhhhccCCChhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhH
Q psy14014 131 VPLVQRLASGDWF--TSRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDII 208 (615)
Q Consensus 131 l~~l~~l~~~~~~--~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll 208 (615)
+.-+...+++... -.|-.+..+-...+.. +++--+++.+++.|.++..|..-.-.++.-...-+. ...+
T Consensus 486 iedm~~Ya~ETQHeki~RGl~vGiaL~~ygr-----qe~Ad~lI~el~~dkdpilR~~Gm~t~alAy~GTgn----nkai 556 (929)
T KOG2062|consen 486 IEDMLTYAQETQHEKIIRGLAVGIALVVYGR-----QEDADPLIKELLRDKDPILRYGGMYTLALAYVGTGN----NKAI 556 (929)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHhHHHHHhhh-----hhhhHHHHHHHhcCCchhhhhhhHHHHHHHHhccCc----hhhH
Confidence 2222333333321 2333333332222222 123346678889999999999866654432111122 2233
Q ss_pred HHHHH-hhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHh-cCCCChHHHHHHHHHHHHHHHHhCccchhhhHH
Q psy14014 209 PMFVN-LAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQC-SGDTSWRVRYMVADKFTDLQKAVGPEITKTDLV 286 (615)
Q Consensus 209 ~~l~~-~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~-~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~ 286 (615)
.-++. ..+|.++.||++|+.+++-++-. .+...|-..++ .++-++.||+.++.+||-.+..-|. ...+
T Consensus 557 r~lLh~aVsD~nDDVrRaAVialGFVl~~------dp~~~~s~V~lLses~N~HVRyGaA~ALGIaCAGtG~----~eAi 626 (929)
T KOG2062|consen 557 RRLLHVAVSDVNDDVRRAAVIALGFVLFR------DPEQLPSTVSLLSESYNPHVRYGAAMALGIACAGTGL----KEAI 626 (929)
T ss_pred HHhhcccccccchHHHHHHHHHheeeEec------ChhhchHHHHHHhhhcChhhhhhHHHHHhhhhcCCCc----HHHH
Confidence 33333 36899999999999998865422 12233444444 4456899999999999998887764 4677
Q ss_pred HHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHH
Q psy14014 287 QAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVK 344 (615)
Q Consensus 287 ~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR 344 (615)
.++..+.+|+..-||+.|+-+++-+.-...+... .-...+...+.+.+.|.+...-
T Consensus 627 ~lLepl~~D~~~fVRQgAlIa~amIm~Q~t~~~~--pkv~~frk~l~kvI~dKhEd~~ 682 (929)
T KOG2062|consen 627 NLLEPLTSDPVDFVRQGALIALAMIMIQQTEQLC--PKVNGFRKQLEKVINDKHEDGM 682 (929)
T ss_pred HHHhhhhcChHHHHHHHHHHHHHHHHHhcccccC--chHHHHHHHHHHHhhhhhhHHH
Confidence 7888889999999999999999887654333221 1134455556667777666543
No 106
>KOG2032|consensus
Probab=98.27 E-value=0.0054 Score=60.06 Aligned_cols=260 Identities=17% Similarity=0.149 Sum_probs=154.2
Q ss_pred HHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcch--hhhhhhHHHHHHhh-cCCChhHHHHHHHhhhHhhhhhchh
Q psy14014 324 IMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKH--NTVDHLLPLFLSQL-KDECPEVRLNIISNLDCVNEVIGIQ 400 (615)
Q Consensus 324 ~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~--~~~~~l~p~l~~~l-~d~~~~vr~~a~~~l~~l~~~~~~~ 400 (615)
.+..++-.+.+-..|++..+|..++..|++.+.....+ .....++..++..| .+.+.+|...++++|..+.+.....
T Consensus 255 lL~s~~~~la~ka~dp~a~~r~~a~r~L~~~as~~P~kv~th~~~~ldaii~gL~D~~~~~V~leam~~Lt~v~~~~~~~ 334 (533)
T KOG2032|consen 255 LLGSVLLSLANKATDPSAKSRGMACRGLGNTASGAPDKVRTHKTTQLDAIIRGLYDDLNEEVQLEAMKCLTMVLEKASND 334 (533)
T ss_pred cHHHHHHHHHHhccCchhHHHHHHHHHHHHHhccCcHHHHHhHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHhhhhc
Confidence 34556666777789999999999999999998763321 22344555555544 4557899999999999887765443
Q ss_pred HHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhCh---HhHHHHHHHH---HHH
Q psy14014 401 QWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGV---EFFDEKLNAL---CMT 474 (615)
Q Consensus 401 ~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~---~~~~~~l~~~---l~~ 474 (615)
+..... + +.- -.+..+..+.+..+|.+++..++.+++..|. ++|.+.+... +.-
T Consensus 335 ~l~~~~-----l-------------~ia--lrlR~l~~se~~~~R~aa~~Lfg~L~~l~g~~~e~~Fte~v~k~~~~lll 394 (533)
T KOG2032|consen 335 DLESYL-----L-------------NIA--LRLRTLFDSEDDKMRAAAFVLFGALAKLAGGGWEEFFTEQVKKRLAPLLL 394 (533)
T ss_pred chhhhc-----h-------------hHH--HHHHHHHHhcChhhhhhHHHHHHHHHHHcCCCchhhhHHHHHhcccccee
Confidence 332211 1 111 2455677888999999999999999987765 3444444422 233
Q ss_pred hcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHHHH--HHHHHHhhhChhhHHHhhHHHHHh
Q psy14014 475 WLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLF--CINVLAEACGPTVTANFLLPTVLN 552 (615)
Q Consensus 475 ~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~--~l~~l~~~~~~~~~~~~i~~~l~~ 552 (615)
.++|+++.+-.+.-. ....+++....+.....+.+.+ |.... |..+.. +.-.+. .+-++. .-........
T Consensus 395 hl~d~~p~va~ACr~----~~~~c~p~l~rke~~~~~q~~l-d~~~~-~~q~Fyn~~c~~L~-~i~~d~-l~~~~t~~~~ 466 (533)
T KOG2032|consen 395 HLQDPNPYVARACRS----ELRTCYPNLVRKELYHLFQESL-DTDMA-RFQAFYNQWCIQLN-HIHPDI-LMLLLTEDQH 466 (533)
T ss_pred eeCCCChHHHHHHHH----HHHhcCchhHHHHHHHHHhhhh-HHhHH-HHHHHHHHHHHHHh-hhCHHH-HHHHHHhchh
Confidence 478888876444333 3334444433332222222222 21111 222111 111111 111111 1122222233
Q ss_pred hCCCCCchHHHHHHHHHHHHhHhhhh----hhHHhhHHHHHhhhcCCCCccHHHHHHHHHHHH
Q psy14014 553 MAGDNVANVRFNVAKTLQKIGPILET----NVIQSQVKPALDKLNGDTDVDVKYFAQEAISSI 611 (615)
Q Consensus 553 ~~~D~~~~vr~~a~~~l~~l~~~~~~----~~~~~~~~~~l~~l~~d~d~~v~~~a~~a~~~~ 611 (615)
+.+..-+.||..+..--.+..-+... ......+...+..|..|+-++|+..|.+|++.+
T Consensus 467 ~f~sswe~vr~aavl~t~~~vd~l~~~~c~~~d~~qL~~~ls~l~~dp~pev~~~a~~al~~l 529 (533)
T KOG2032|consen 467 IFSSSWEQVREAAVLKTTRSVDSLVRAACSSADGLQLRSSLSTLWRDPRPEVTDSARKALDLL 529 (533)
T ss_pred heecchHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHccCCCchhHHHHHHHhhhH
Confidence 45677778888777666555443322 234566788888899999999999999999875
No 107
>cd00020 ARM Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, the junctional plaque protein plakoglobin, the adenomatous polyposis coli (APC) tumor suppressor protein, and a number of other proteins. ARM has been implicated in mediating protein-protein interactions, but no common features among the target proteins recognized by the ARM repeats have been identified; related to the HEAT domain; three consecutive copies of the repeat are represented by this alignment model.
Probab=98.26 E-value=5.9e-06 Score=67.91 Aligned_cols=109 Identities=17% Similarity=0.186 Sum_probs=87.7
Q ss_pred hchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhCh---hhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhh---
Q psy14014 505 STVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGP---TVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILET--- 578 (615)
Q Consensus 505 ~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~---~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~--- 578 (615)
..+++.+.+++.++++.+|..++.+++.++...+. ......++|.+.+++.|+++.++..++.+|+++....+.
T Consensus 6 ~~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~ 85 (120)
T cd00020 6 AGGLPALVSLLSSSDENVQREAAWALSNLSAGNNDNIQAVVEAGGLPALVQLLKSEDEEVVKAALWALRNLAAGPEDNKL 85 (120)
T ss_pred cCChHHHHHHHHcCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCChHHHHHHHhCCCHHHHHHHHHHHHHHccCcHHHHH
Confidence 34889999999999999999999999999865222 223458899999999999999999999999999865432
Q ss_pred hhHHhhHHHHHhhhcCCCCccHHHHHHHHHHHHhh
Q psy14014 579 NVIQSQVKPALDKLNGDTDVDVKYFAQEAISSIAD 613 (615)
Q Consensus 579 ~~~~~~~~~~l~~l~~d~d~~v~~~a~~a~~~~~~ 613 (615)
......+.+.+.+++.+.+.++++.|..++..+.+
T Consensus 86 ~~~~~g~l~~l~~~l~~~~~~~~~~a~~~l~~l~~ 120 (120)
T cd00020 86 IVLEAGGVPKLVNLLDSSNEDIQKNATGALSNLAS 120 (120)
T ss_pred HHHHCCChHHHHHHHhcCCHHHHHHHHHHHHHhhC
Confidence 12334467777777788899999999999988764
No 108
>PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function.
Probab=98.26 E-value=8.9e-05 Score=68.51 Aligned_cols=188 Identities=13% Similarity=0.138 Sum_probs=127.5
Q ss_pred HHHHHhC-CCChHHHHHHHHhHHHHHHHhchh--hhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHH
Q psy14014 171 HFRNLCQ-DDTPMVRRAAAGKLGELAKVVEVD--YLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVM 247 (615)
Q Consensus 171 ~l~~l~~-d~~~~vR~~a~~~l~~l~~~~~~~--~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~ 247 (615)
.+..+++ ..++.++..+.-+++..+..-... ......++.+..++.++++.+|..|+.++..++.........+..+
T Consensus 16 ~Ll~lL~~t~dp~i~e~al~al~n~aaf~~nq~~Ir~~Ggi~lI~~lL~~p~~~vr~~AL~aL~Nls~~~en~~~Ik~~i 95 (254)
T PF04826_consen 16 KLLCLLESTEDPFIQEKALIALGNSAAFPFNQDIIRDLGGISLIGSLLNDPNPSVREKALNALNNLSVNDENQEQIKMYI 95 (254)
T ss_pred HHHHHHhcCCChHHHHHHHHHHHhhccChhHHHHHHHcCCHHHHHHHcCCCChHHHHHHHHHHHhcCCChhhHHHHHHHH
Confidence 3444444 578999999999999876533222 2334689999999999999999999999998876655543333334
Q ss_pred HHHHH-hcCCC-ChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHH
Q psy14014 248 PTLRQ-CSGDT-SWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIM 325 (615)
Q Consensus 248 ~~l~~-~~~d~-~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~ 325 (615)
+.+.+ ...++ +..+..++...|..+...-..+......+|.+..++...+..+|..+++.|..+... +....+.+.
T Consensus 96 ~~Vc~~~~s~~lns~~Q~agLrlL~nLtv~~~~~~~l~~~i~~ll~LL~~G~~~~k~~vLk~L~nLS~n--p~~~~~Ll~ 173 (254)
T PF04826_consen 96 PQVCEETVSSPLNSEVQLAGLRLLTNLTVTNDYHHMLANYIPDLLSLLSSGSEKTKVQVLKVLVNLSEN--PDMTRELLS 173 (254)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHccCCCcchhhhHHhhHHHHHHHHHcCChHHHHHHHHHHHHhccC--HHHHHHHHh
Confidence 44433 44433 567888888988888643322223345677788889888889999999999888763 222223444
Q ss_pred HhhHHHHHHhhCCC-CHHHHHHHHHHHHhhchhhcc
Q psy14014 326 TYILPYVKDLVADP-NQHVKSALASVIMGLSPILGK 360 (615)
Q Consensus 326 ~~l~p~l~~~~~d~-~~~vR~~~~~~l~~l~~~~g~ 360 (615)
.+.++.+..+++.. +..+-..++..+.++...+.+
T Consensus 174 ~q~~~~~~~Lf~~~~~~~~l~~~l~~~~ni~~~~~~ 209 (254)
T PF04826_consen 174 AQVLSSFLSLFNSSESKENLLRVLTFFENINENIKK 209 (254)
T ss_pred ccchhHHHHHHccCCccHHHHHHHHHHHHHHHhhCc
Confidence 55666666777654 566667777777777665544
No 109
>KOG2032|consensus
Probab=98.26 E-value=0.00011 Score=71.24 Aligned_cols=251 Identities=19% Similarity=0.171 Sum_probs=140.2
Q ss_pred cCCcHH-HHHHHHHHhccccCCCCC--cchhhhchH-HHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHH
Q psy14014 61 IYDEDE-VLLALAEQLGTFTPNVGG--PEYVHCLLP-PLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQR 136 (615)
Q Consensus 61 ~~~~~~-vr~~a~~~l~~l~~~~~~--~~~~~~l~~-~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~ 136 (615)
..|++. +|..++.+|+..+....+ -.|.+.++. ++..+..+.+.+|...++.+|..+.+.....+++.+++++-.+
T Consensus 267 a~dp~a~~r~~a~r~L~~~as~~P~kv~th~~~~ldaii~gL~D~~~~~V~leam~~Lt~v~~~~~~~~l~~~~l~ialr 346 (533)
T KOG2032|consen 267 ATDPSAKSRGMACRGLGNTASGAPDKVRTHKTTQLDAIIRGLYDDLNEEVQLEAMKCLTMVLEKASNDDLESYLLNIALR 346 (533)
T ss_pred ccCchhHHHHHHHHHHHHHhccCcHHHHHhHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHhhhhcchhhhchhHHHH
Confidence 345554 888899999888875332 123344443 3455666667788888888888888887777777777665432
Q ss_pred hhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchh---hh----HhhhHH
Q psy14014 137 LASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVD---YL----KTDIIP 209 (615)
Q Consensus 137 l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~---~~----~~~ll~ 209 (615)
+..+..|.++.+|.++...+|.+++..+.. .+ ...+.|
T Consensus 347 -----------------------------------lR~l~~se~~~~R~aa~~Lfg~L~~l~g~~~e~~Fte~v~k~~~~ 391 (533)
T KOG2032|consen 347 -----------------------------------LRTLFDSEDDKMRAAAFVLFGALAKLAGGGWEEFFTEQVKKRLAP 391 (533)
T ss_pred -----------------------------------HHHHHHhcChhhhhhHHHHHHHHHHHcCCCchhhhHHHHHhcccc
Confidence 245567788899999999999998877642 11 122223
Q ss_pred HHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHH-HHHH-HHHHHHHhCccchhhhHHH
Q psy14014 210 MFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYM-VADK-FTDLQKAVGPEITKTDLVQ 287 (615)
Q Consensus 210 ~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~-~~~~-l~~l~~~~~~~~~~~~l~~ 287 (615)
++. .++|+++.|-.++-..+....+++..+.... ++.+.+ |.... |.. ..+. .-.+....+ + ..--+..
T Consensus 392 lll-hl~d~~p~va~ACr~~~~~c~p~l~rke~~~----~~q~~l-d~~~~-~~q~Fyn~~c~~L~~i~~-d-~l~~~~t 462 (533)
T KOG2032|consen 392 LLL-HLQDPNPYVARACRSELRTCYPNLVRKELYH----LFQESL-DTDMA-RFQAFYNQWCIQLNHIHP-D-ILMLLLT 462 (533)
T ss_pred cee-eeCCCChHHHHHHHHHHHhcCchhHHHHHHH----HHhhhh-HHhHH-HHHHHHHHHHHHHhhhCH-H-HHHHHHH
Confidence 222 3578888887776666655555544433222 221112 22111 110 1111 001111100 0 0001112
Q ss_pred HHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhc
Q psy14014 288 AFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLS 355 (615)
Q Consensus 288 ~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~ 355 (615)
...-+++...+.||.++....+.+..++............+...+..+..|+-+.++..+.++++.+.
T Consensus 463 ~~~~~f~sswe~vr~aavl~t~~~vd~l~~~~c~~~d~~qL~~~ls~l~~dp~pev~~~a~~al~~l~ 530 (533)
T KOG2032|consen 463 EDQHIFSSSWEQVREAAVLKTTRSVDSLVRAACSSADGLQLRSSLSTLWRDPRPEVTDSARKALDLLS 530 (533)
T ss_pred hchhheecchHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHccCCCchhHHHHHHHhhhHh
Confidence 22234455566788887777776666554332222234445556666777777888877777776543
No 110
>PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function.
Probab=98.20 E-value=9.4e-05 Score=68.33 Aligned_cols=216 Identities=15% Similarity=0.091 Sum_probs=141.3
Q ss_pred hHHHHHHhhc-CCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHH
Q psy14014 367 LLPLFLSQLK-DECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVR 445 (615)
Q Consensus 367 l~p~l~~~l~-d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr 445 (615)
-+..+..+|+ .+++.+++.+.-+++........ +.. + ...|. .+.+..++.+++..+|
T Consensus 13 ~l~~Ll~lL~~t~dp~i~e~al~al~n~aaf~~n----q~~-----I----r~~Gg--------i~lI~~lL~~p~~~vr 71 (254)
T PF04826_consen 13 ELQKLLCLLESTEDPFIQEKALIALGNSAAFPFN----QDI-----I----RDLGG--------ISLIGSLLNDPNPSVR 71 (254)
T ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHhhccChhH----HHH-----H----HHcCC--------HHHHHHHcCCCChHHH
Confidence 3456677776 45788999888887765332111 110 1 01110 1678889999999999
Q ss_pred HHHHHHhHHHHhhhChHhHHHHHHHHHHHh-cCC-cchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHH
Q psy14014 446 LAIIEYMPLLAGQLGVEFFDEKLNALCMTW-LVD-HVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHR 523 (615)
Q Consensus 446 ~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~-l~d-~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R 523 (615)
..++.++..++........-...++.+.+. ..+ -+..+..++++.|..+.-...........+|.+..++..++..+|
T Consensus 72 ~~AL~aL~Nls~~~en~~~Ik~~i~~Vc~~~~s~~lns~~Q~agLrlL~nLtv~~~~~~~l~~~i~~ll~LL~~G~~~~k 151 (254)
T PF04826_consen 72 EKALNALNNLSVNDENQEQIKMYIPQVCEETVSSPLNSEVQLAGLRLLTNLTVTNDYHHMLANYIPDLLSLLSSGSEKTK 151 (254)
T ss_pred HHHHHHHHhcCCChhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHccCCCcchhhhHHhhHHHHHHHHHcCChHHH
Confidence 999999998866543322222334444443 333 367888999999998864322222223468888899999999999
Q ss_pred HHHHHHHHHHHhhhC--hhhHHHhhHHHHHhhCCCC-CchHHHHHHHHHHHHhHhhhhh---------------hH---H
Q psy14014 524 MTCLFCINVLAEACG--PTVTANFLLPTVLNMAGDN-VANVRFNVAKTLQKIGPILETN---------------VI---Q 582 (615)
Q Consensus 524 ~~a~~~l~~l~~~~~--~~~~~~~i~~~l~~~~~D~-~~~vr~~a~~~l~~l~~~~~~~---------------~~---~ 582 (615)
..+++++..+++.-. .+.+..+.+..+..+.+.. ..++...+...+.++...+..+ .. .
T Consensus 152 ~~vLk~L~nLS~np~~~~~Ll~~q~~~~~~~Lf~~~~~~~~l~~~l~~~~ni~~~~~~~~~~~~~~~~~~~~L~~~~~e~ 231 (254)
T PF04826_consen 152 VQVLKVLVNLSENPDMTRELLSAQVLSSFLSLFNSSESKENLLRVLTFFENINENIKKEAYVFVQDDFSEDSLFSLFGES 231 (254)
T ss_pred HHHHHHHHHhccCHHHHHHHHhccchhHHHHHHccCCccHHHHHHHHHHHHHHHhhCcccceeccccCCchhHHHHHccH
Confidence 999999999986532 2334456777777777654 6788889999999997765421 01 1
Q ss_pred hhHHHHHhhhcCCCCccHHHH
Q psy14014 583 SQVKPALDKLNGDTDVDVKYF 603 (615)
Q Consensus 583 ~~~~~~l~~l~~d~d~~v~~~ 603 (615)
+.+..-+..|...+|++||..
T Consensus 232 ~~~~~~l~~l~~h~d~ev~~~ 252 (254)
T PF04826_consen 232 SQLAKKLQALANHPDPEVKEQ 252 (254)
T ss_pred HHHHHHHHHHHcCCCHHHhhh
Confidence 223444445568899999975
No 111
>KOG0567|consensus
Probab=98.20 E-value=0.00074 Score=60.45 Aligned_cols=188 Identities=18% Similarity=0.163 Sum_probs=126.5
Q ss_pred HHHHHHhC--CCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhh------
Q psy14014 170 SHFRNLCQ--DDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSD------ 241 (615)
Q Consensus 170 ~~l~~l~~--d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~------ 241 (615)
|.+...+. +..+.||..++++|+.+. ....++++.++.+|+-..||+.+..++..+-..-..+.
T Consensus 70 ~~l~~vl~desq~pmvRhEAaealga~~--------~~~~~~~l~k~~~dp~~~v~ETc~lAi~rle~~~~~~~~~~~~p 141 (289)
T KOG0567|consen 70 PVLVEVLLDESQEPMVRHEAAEALGAIG--------DPESLEILTKYIKDPCKEVRETCELAIKRLEWKDIIDKIANSSP 141 (289)
T ss_pred HHHHHHhcccccchHHHHHHHHHHHhhc--------chhhHHHHHHHhcCCccccchHHHHHHHHHHHhhccccccccCc
Confidence 44444444 457889999999999985 34678888888899999999988777776543221111
Q ss_pred HH------H---hHHHHHHHhcCCCCh--HHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHH
Q psy14014 242 VE------Q---LVMPTLRQCSGDTSW--RVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRD 310 (615)
Q Consensus 242 ~~------~---~l~~~l~~~~~d~~~--~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~ 310 (615)
+. + .-+.-+...+.|... .-|+.+.-.|.++ ..+.-+-.+.+.+.++..-.|..++..+|+
T Consensus 142 ~~SvdPa~p~~~ssv~~lr~~lld~t~~l~~Ry~amF~LRn~--------g~EeaI~al~~~l~~~SalfrhEvAfVfGQ 213 (289)
T KOG0567|consen 142 YISVDPAPPANLSSVHELRAELLDETKPLFERYRAMFYLRNI--------GTEEAINALIDGLADDSALFRHEVAFVFGQ 213 (289)
T ss_pred cccCCCCCccccccHHHHHHHHHhcchhHHHHHhhhhHhhcc--------CcHHHHHHHHHhcccchHHHHHHHHHHHhh
Confidence 00 0 011112222222211 1233222222221 124567778888888888899999999988
Q ss_pred HHhhccccchhHHHHHhhHHHHHHhhCC--CCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHH
Q psy14014 311 FCQNLDAYNQENIIMTYILPYVKDLVAD--PNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIIS 388 (615)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~p~l~~~~~d--~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~ 388 (615)
+-. +..+|.+.+.+.| +++.||..++++|+.++. +.-++.+.+.+.|+.+-||+.+.-
T Consensus 214 l~s------------~~ai~~L~k~L~d~~E~pMVRhEaAeALGaIa~--------e~~~~vL~e~~~D~~~vv~esc~v 273 (289)
T KOG0567|consen 214 LQS------------PAAIPSLIKVLLDETEHPMVRHEAAEALGAIAD--------EDCVEVLKEYLGDEERVVRESCEV 273 (289)
T ss_pred ccc------------hhhhHHHHHHHHhhhcchHHHHHHHHHHHhhcC--------HHHHHHHHHHcCCcHHHHHHHHHH
Confidence 755 4567888887765 578999999999998764 346788999999999999999988
Q ss_pred hhhHh
Q psy14014 389 NLDCV 393 (615)
Q Consensus 389 ~l~~l 393 (615)
+|+..
T Consensus 274 aldm~ 278 (289)
T KOG0567|consen 274 ALDML 278 (289)
T ss_pred HHHHH
Confidence 87644
No 112
>KOG1077|consensus
Probab=98.19 E-value=0.011 Score=60.37 Aligned_cols=293 Identities=13% Similarity=0.073 Sum_probs=159.9
Q ss_pred HHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcH-H-HHHHHHHHhccccCCCCCcchhhhch
Q psy14014 15 IAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDED-E-VLLALAEQLGTFTPNVGGPEYVHCLL 92 (615)
Q Consensus 15 i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~-~-vr~~a~~~l~~l~~~~~~~~~~~~l~ 92 (615)
|..+.+.+.|.|+..-.-|++.++.+...-..+.+...+-.+| .+.+. . ||+.++-||-.+.+.-.+......-.
T Consensus 113 in~iknDL~srn~~fv~LAL~~I~niG~re~~ea~~~DI~KlL---vS~~~~~~vkqkaALclL~L~r~spDl~~~~~W~ 189 (938)
T KOG1077|consen 113 INSIKNDLSSRNPTFVCLALHCIANIGSREMAEAFADDIPKLL---VSGSSMDYVKQKAALCLLRLFRKSPDLVNPGEWA 189 (938)
T ss_pred HHHHHhhhhcCCcHHHHHHHHHHHhhccHhHHHHhhhhhHHHH---hCCcchHHHHHHHHHHHHHHHhcCccccChhhHH
Confidence 4555667778888877788888888743222222222232222 23333 3 99999999988887543322223334
Q ss_pred HHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHh---hcC--CC-----------cchhhhHHhhhhhh
Q psy14014 93 PPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRL---ASG--DW-----------FTSRTSACGLFSVC 156 (615)
Q Consensus 93 ~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l---~~~--~~-----------~~~r~~a~~~l~~~ 156 (615)
..+..+++|.+-.|-.++..-+..+++..+++... -+.+.+.++ +.. .+ +.-....++++...
T Consensus 190 ~riv~LL~D~~~gv~ta~~sLi~~lvk~~p~~yk~-~~~~avs~L~riv~~~~t~~qdYTyy~vP~PWL~vKl~rlLq~~ 268 (938)
T KOG1077|consen 190 QRIVHLLDDQHMGVVTAATSLIEALVKKNPESYKT-CLPLAVSRLSRIVVVVGTSLQDYTYYFVPAPWLQVKLLRLLQIY 268 (938)
T ss_pred HHHHHHhCccccceeeehHHHHHHHHHcCCHHHhh-hHHHHHHHHHHHHhhcccchhhceeecCCChHHHHHHHHHHHhC
Confidence 45677778999889889988888888888764322 222222222 111 00 00011122222222
Q ss_pred ccCCChhhHHH---HHHHHHHHhCC--CChHHHHH-----HHHhHHHHHHHhch-hhhHhhhHHHHHHhhccCchhHHHH
Q psy14014 157 YPRVTAGVKAE---LRSHFRNLCQD--DTPMVRRA-----AAGKLGELAKVVEV-DYLKTDIIPMFVNLAQDEQDSVRLL 225 (615)
Q Consensus 157 ~~~~~~~~~~~---l~~~l~~l~~d--~~~~vR~~-----a~~~l~~l~~~~~~-~~~~~~ll~~l~~~~~d~~~~vr~~ 225 (615)
-..-.+..+.. +++.++...++ .+..|.+. ++--...++-+... ......-...+-+++.+.+..+|..
T Consensus 269 p~~~D~~~r~~l~evl~~iLnk~~~~~~~k~vq~~na~naVLFeaI~l~~h~D~e~~ll~~~~~~Lg~fls~rE~NiRYL 348 (938)
T KOG1077|consen 269 PTPEDPSTRARLNEVLERILNKAQEPPKSKKVQHSNAKNAVLFEAISLAIHLDSEPELLSRAVNQLGQFLSHRETNIRYL 348 (938)
T ss_pred CCCCCchHHHHHHHHHHHHHhccccCccccchHhhhhHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHhhcccccchhh
Confidence 11111222222 22222222221 11122221 22222222222222 2223344455566677888888888
Q ss_pred HHHHHHHHHhhcChhhHHHhHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHH
Q psy14014 226 AVEACVSIASLLSQSDVEQLVMPTLRQCSG-DTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAA 304 (615)
Q Consensus 226 a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~-d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a 304 (615)
|++.+..++..-...+...+-...+...++ +++..+|+.+++.|..++..-. ...++.-+++.+...++.+|+..
T Consensus 349 aLEsm~~L~ss~~s~davK~h~d~Ii~sLkterDvSirrravDLLY~mcD~~N----ak~IV~elLqYL~tAd~sireei 424 (938)
T KOG1077|consen 349 ALESMCKLASSEFSIDAVKKHQDTIINSLKTERDVSIRRRAVDLLYAMCDVSN----AKQIVAELLQYLETADYSIREEI 424 (938)
T ss_pred hHHHHHHHHhccchHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhchhh----HHHHHHHHHHHHhhcchHHHHHH
Confidence 888888777653322222222455555555 8888899999998888875422 34677777788888888888877
Q ss_pred HHHHHHHHhhc
Q psy14014 305 ANKVRDFCQNL 315 (615)
Q Consensus 305 ~~~l~~~~~~~ 315 (615)
+....-+.+.+
T Consensus 425 vlKvAILaEKy 435 (938)
T KOG1077|consen 425 VLKVAILAEKY 435 (938)
T ss_pred HHHHHHHHHHh
Confidence 76666666544
No 113
>KOG4653|consensus
Probab=98.18 E-value=0.00032 Score=72.73 Aligned_cols=212 Identities=12% Similarity=0.091 Sum_probs=151.8
Q ss_pred hhhhcCchhHHHHHHHHHHHHHHhhcCh--hHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHHH
Q psy14014 96 ESLATVEETVVRDKAVESLRLISAQHSP--HDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFR 173 (615)
Q Consensus 96 ~~l~~~~~~~vr~~a~~~l~~l~~~~~~--~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~ 173 (615)
...+.|+...+|-.++..+..+.+.-.+ -.....++.....+..|++..+-..|+..+..++...++.+.+.+...+.
T Consensus 733 i~sl~d~qvpik~~gL~~l~~l~e~r~~~~~~~~ekvl~i~ld~LkdedsyvyLnaI~gv~~Lcevy~e~il~dL~e~Y~ 812 (982)
T KOG4653|consen 733 ISSLHDDQVPIKGYGLQMLRHLIEKRKKATLIQGEKVLAIALDTLKDEDSYVYLNAIRGVVSLCEVYPEDILPDLSEEYL 812 (982)
T ss_pred HHHhcCCcccchHHHHHHHHHHHHhcchhhhhhHHHHHHHHHHHhcccCceeeHHHHHHHHHHHHhcchhhHHHHHHHHH
Confidence 3345677788999999999998885433 23345678888888888888888888888888888877777777777666
Q ss_pred HHhCCCChHHHHHHHHhHHHHHHHhchh--hhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcC---hhhHHHhHHH
Q psy14014 174 NLCQDDTPMVRRAAAGKLGELAKVVEVD--YLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLS---QSDVEQLVMP 248 (615)
Q Consensus 174 ~l~~d~~~~vR~~a~~~l~~l~~~~~~~--~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~---~~~~~~~l~~ 248 (615)
..-....++.|-.+.++++.+++..|+- .+...++..+.....|++...|..++..++.++.... .+. ...++.
T Consensus 813 s~k~k~~~d~~lkVGEai~k~~qa~Gel~~~y~~~Li~tfl~gvrepd~~~RaSS~a~lg~Lcq~~a~~vsd~-~~ev~~ 891 (982)
T KOG4653|consen 813 SEKKKLQTDYRLKVGEAILKVAQALGELVFKYKAVLINTFLSGVREPDHEFRASSLANLGQLCQLLAFQVSDF-FHEVLQ 891 (982)
T ss_pred hcccCCCccceehHHHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHHHHHHhhhhhHH-HHHHHH
Confidence 6555555677777889999999888762 3455788888888889988999999999999887665 332 223333
Q ss_pred HHHH-hcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhh------------cCCcHHHHHHHHHHHHHHHh
Q psy14014 249 TLRQ-CSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLL------------KDSEAEVRAAAANKVRDFCQ 313 (615)
Q Consensus 249 ~l~~-~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l------------~d~~~~vr~~a~~~l~~~~~ 313 (615)
.+.. .-.|.+..+|++|+..+..+....|. .++|++...+ .+.+..+|..|..++..+-.
T Consensus 892 ~Il~l~~~d~s~~vRRaAv~li~~lL~~tg~-----dlLpilr~~l~Dl~~tl~~~vr~~~dd~~klhaql~leei~a 964 (982)
T KOG4653|consen 892 LILSLETTDGSVLVRRAAVHLLAELLNGTGE-----DLLPILRLLLIDLDETLLSYVRQHDDDGLKLHAQLCLEEIQA 964 (982)
T ss_pred HHHHHHccCCchhhHHHHHHHHHHHHhccch-----hhHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHH
Confidence 3333 34688999999999999998887774 3445443222 24445566666666665444
No 114
>KOG4413|consensus
Probab=98.17 E-value=0.0059 Score=56.40 Aligned_cols=282 Identities=14% Similarity=0.107 Sum_probs=156.4
Q ss_pred HHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChh--------hHHHHHHHHHHHhCCCCh
Q psy14014 110 AVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAG--------VKAELRSHFRNLCQDDTP 181 (615)
Q Consensus 110 a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~--------~~~~l~~~l~~l~~d~~~ 181 (615)
.+.++.++.+...+.++.+.++|.+++-...++..++..+++.++.+.+....+ ...++++++..++..++.
T Consensus 63 cVscLERLfkakegahlapnlmpdLQrGLiaddasVKiLackqigcilEdcDtnaVseillvvNaeilklildcIggedd 142 (524)
T KOG4413|consen 63 CVSCLERLFKAKEGAHLAPNLMPDLQRGLIADDASVKILACKQIGCILEDCDTNAVSEILLVVNAEILKLILDCIGGEDD 142 (524)
T ss_pred HHHHHHHHHhhccchhhchhhhHHHHhcccCCcchhhhhhHhhhhHHHhcCchhhHHHHHHHhhhhHHHHHHHHHcCCcH
Confidence 555666666666566666777888877666677778888888888777766532 135678888888899999
Q ss_pred HHHHHHHHhHHHHHHHhch--hhhHhhhHHH--HHHhhccCchhHHHHHHHHHHHHHhhcCh---hhHHHhHHHHHHHhc
Q psy14014 182 MVRRAAAGKLGELAKVVEV--DYLKTDIIPM--FVNLAQDEQDSVRLLAVEACVSIASLLSQ---SDVEQLVMPTLRQCS 254 (615)
Q Consensus 182 ~vR~~a~~~l~~l~~~~~~--~~~~~~ll~~--l~~~~~d~~~~vr~~a~~~l~~l~~~~~~---~~~~~~l~~~l~~~~ 254 (615)
+|.+++.+.+..++..-.. ..+.++++.- +..+.--.++.+|...++.+..+.+..+. +...+.++..+..-+
T Consensus 143 eVAkAAiesikrialfpaaleaiFeSellDdlhlrnlaakcndiaRvRVleLIieifSiSpesaneckkSGLldlLeaEl 222 (524)
T KOG4413|consen 143 EVAKAAIESIKRIALFPAALEAIFESELLDDLHLRNLAAKCNDIARVRVLELIIEIFSISPESANECKKSGLLDLLEAEL 222 (524)
T ss_pred HHHHHHHHHHHHHHhcHHHHHHhcccccCChHHHhHHHhhhhhHHHHHHHHHHHHHHhcCHHHHhHhhhhhHHHHHHHHh
Confidence 9999999999888753110 0011111110 01111122445565555655555544332 122334666665555
Q ss_pred CC-CChHHHHHHHHHHHHHHHHhC-ccch-hhhHHHHHHHhhc--CCcHHHHHHHHHHHHHHHhhccccchh----HHHH
Q psy14014 255 GD-TSWRVRYMVADKFTDLQKAVG-PEIT-KTDLVQAFQMLLK--DSEAEVRAAAANKVRDFCQNLDAYNQE----NIIM 325 (615)
Q Consensus 255 ~d-~~~~vR~~~~~~l~~l~~~~~-~~~~-~~~l~~~l~~~l~--d~~~~vr~~a~~~l~~~~~~~~~~~~~----~~~~ 325 (615)
+. .+.-||..+++....++..-. .+.. ...++..+...+. |++|--+ ++++..+.+.++++... +...
T Consensus 223 kGteDtLVianciElvteLaeteHgreflaQeglIdlicnIIsGadsdPfek---fralmgfgkffgkeaimdvseeaic 299 (524)
T KOG4413|consen 223 KGTEDTLVIANCIELVTELAETEHGREFLAQEGLIDLICNIISGADSDPFEK---FRALMGFGKFFGKEAIMDVSEEAIC 299 (524)
T ss_pred cCCcceeehhhHHHHHHHHHHHhhhhhhcchhhHHHHHHHHhhCCCCCcHHH---HHHHHHHHHHhcchHHhhcCHHHHH
Confidence 54 677789999988888875422 2211 1245555544442 3333222 33455555555554321 1112
Q ss_pred Hhh---HHHHHHhhCCCCHHHHHHHHHHHHhhchhhc-chhhhhhhHHHHHHh---hcCCChh-HHHHHHHhhhHhh
Q psy14014 326 TYI---LPYVKDLVADPNQHVKSALASVIMGLSPILG-KHNTVDHLLPLFLSQ---LKDECPE-VRLNIISNLDCVN 394 (615)
Q Consensus 326 ~~l---~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g-~~~~~~~l~p~l~~~---l~d~~~~-vr~~a~~~l~~l~ 394 (615)
+.+ +.-..+++...++....+++.+++.++.... .+.....--|.+.++ .-|.+.. -+..++.+|..+.
T Consensus 300 ealiiaidgsfEmiEmnDpdaieaAiDalGilGSnteGadlllkTgppaaehllarafdqnahakqeaaihaLaaIa 376 (524)
T KOG4413|consen 300 EALIIAIDGSFEMIEMNDPDAIEAAIDALGILGSNTEGADLLLKTGPPAAEHLLARAFDQNAHAKQEAAIHALAAIA 376 (524)
T ss_pred HHHHHHHHhhHHhhhcCCchHHHHHHHHHHhccCCcchhHHHhccCChHHHHHHHHHhcccccchHHHHHHHHHHhh
Confidence 222 2222345667788888999999998876543 332222222333333 2344332 3445566665554
No 115
>KOG2956|consensus
Probab=98.16 E-value=0.00027 Score=68.33 Aligned_cols=194 Identities=15% Similarity=0.147 Sum_probs=132.6
Q ss_pred HHHHHHHhhcCCCcchhhhHHh-hhhhhccCC-C--hhhHHHHHHHHHHHhCC-CChHHHHHHHHhHHHHHHHhchhh--
Q psy14014 130 FVPLVQRLASGDWFTSRTSACG-LFSVCYPRV-T--AGVKAELRSHFRNLCQD-DTPMVRRAAAGKLGELAKVVEVDY-- 202 (615)
Q Consensus 130 ~l~~l~~l~~~~~~~~r~~a~~-~l~~~~~~~-~--~~~~~~l~~~l~~l~~d-~~~~vR~~a~~~l~~l~~~~~~~~-- 202 (615)
+...+..+.++.....|..|.. +...++..- + ++...+|+..+.+.+.| .++..|+.|++.|..++..-+...
T Consensus 288 v~~~l~~~~g~e~a~~~k~alsel~~m~~e~sfsvWeq~f~~iL~~l~EvL~d~~~~~~k~laLrvL~~ml~~Q~~~l~D 367 (516)
T KOG2956|consen 288 VADLLKEISGSERASERKEALSELPKMLCEGSFSVWEQHFAEILLLLLEVLSDSEDEIIKKLALRVLREMLTNQPARLFD 367 (516)
T ss_pred HHHHHHhccCccchhHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHhchHhhhc
Confidence 4555556666656667777776 444444332 1 45566777777888888 889999999999999998755432
Q ss_pred hHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccc--
Q psy14014 203 LKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEI-- 280 (615)
Q Consensus 203 ~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~-- 280 (615)
.....+.-+++..+|.+++|-..|.+.+..+.....+......+.|.+.. .+...--++++.+.++...+..+.
T Consensus 368 stE~ai~K~Leaa~ds~~~v~~~Aeed~~~~las~~P~~~I~~i~~~Ilt----~D~~~~~~~iKm~Tkl~e~l~~EeL~ 443 (516)
T KOG2956|consen 368 STEIAICKVLEAAKDSQDEVMRVAEEDCLTTLASHLPLQCIVNISPLILT----ADEPRAVAVIKMLTKLFERLSAEELL 443 (516)
T ss_pred hHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhCchhHHHHHhhHHhc----CcchHHHHHHHHHHHHHhhcCHHHHH
Confidence 23344555677778888877666666655544444444445556666654 344445567777788777666543
Q ss_pred -hhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHh
Q psy14014 281 -TKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDL 335 (615)
Q Consensus 281 -~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~ 335 (615)
..+.+.|.+++........||+.|+.+|..+...++. +.+-|+|..+
T Consensus 444 ~ll~diaP~~iqay~S~SS~VRKtaVfCLVamv~~vG~--------~~mePhL~~L 491 (516)
T KOG2956|consen 444 NLLPDIAPCVIQAYDSTSSTVRKTAVFCLVAMVNRVGM--------EEMEPHLEQL 491 (516)
T ss_pred HhhhhhhhHHHHHhcCchHHhhhhHHHhHHHHHHHHhH--------HhhhhHhhhc
Confidence 2467899999999999999999999999999887652 4466776654
No 116
>KOG0413|consensus
Probab=98.14 E-value=0.018 Score=60.94 Aligned_cols=172 Identities=14% Similarity=0.132 Sum_probs=107.0
Q ss_pred cCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCC
Q psy14014 439 DSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQ 518 (615)
Q Consensus 439 ~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~ 518 (615)
.....+|.-.+-+++.++..+.. .-+..+|.+-..|.|+..-||..++..+..+... |--.+...++=++.-.+-|.
T Consensus 980 ~~~~aiRnNiV~am~D~C~~YTa--m~d~YiP~I~~~L~Dp~~iVRrqt~ilL~rLLq~-~~vKw~G~Lf~Rf~l~l~D~ 1056 (1529)
T KOG0413|consen 980 NTAHAIRNNIVLAMGDICSSYTA--MTDRYIPMIAASLCDPSVIVRRQTIILLARLLQF-GIVKWNGELFIRFMLALLDA 1056 (1529)
T ss_pred hhHHHHhcceeeeehhhHHHHHH--HHHHhhHHHHHHhcCchHHHHHHHHHHHHHHHhh-hhhhcchhhHHHHHHHHccc
Confidence 34455666666666666653321 2466788888899999999999999998888763 32223344555555567789
Q ss_pred CchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhh-----------------------CCCCCchHHHHHHHHHHHHhHh
Q psy14014 519 NYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNM-----------------------AGDNVANVRFNVAKTLQKIGPI 575 (615)
Q Consensus 519 ~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~-----------------------~~D~~~~vr~~a~~~l~~l~~~ 575 (615)
++.+|.-+=.+++.+...-.|.+|...+...+..+ +.-.++.-|..-++...-+..+
T Consensus 1057 ~edIr~~a~f~~~~vL~~~~P~~f~~~FVe~i~~ln~~~~h~g~~n~~qs~r~~~~fSi~G~d~~aR~~Rm~IY~fLL~~ 1136 (1529)
T KOG0413|consen 1057 NEDIRNDAKFYISEVLQSEEPNFFPLNFVEYIIALNQARRHVGVGNHDQSDRGQVDFSIGGGDPLARPSRMAIYTFLLDS 1136 (1529)
T ss_pred CHHHHHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHhhCCCCCcccchhceeEeecCCCcccchhhhhHHHHHHHh
Confidence 99999999999999988766665543333322221 1234455565555555566666
Q ss_pred hhhhhHH--------hhHHHHHhhhcCCCCccHHHHHHHHHHHHhh
Q psy14014 576 LETNVIQ--------SQVKPALDKLNGDTDVDVKYFAQEAISSIAD 613 (615)
Q Consensus 576 ~~~~~~~--------~~~~~~l~~l~~d~d~~v~~~a~~a~~~~~~ 613 (615)
+.++... +.+-++....+.=.|.++...-.+|+..+++
T Consensus 1137 ~~de~rf~v~~kiC~~Ila~~~dG~l~~~D~~~q~lL~Daf~ILas 1182 (1529)
T KOG0413|consen 1137 LDDESRFDVKMKICQRILAPIVDGELDFSDYNVQCLLDDAFLILAS 1182 (1529)
T ss_pred cChHHHHHHHHHHHHHHHHHHhcCcCChhhccHHHHHHHHHHHHhh
Confidence 5543221 2222222222344477777777788877764
No 117
>KOG2137|consensus
Probab=98.13 E-value=0.00026 Score=72.37 Aligned_cols=236 Identities=14% Similarity=0.204 Sum_probs=153.7
Q ss_pred CcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhh
Q psy14014 296 SEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQL 375 (615)
Q Consensus 296 ~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l 375 (615)
.++.-+..-.+.|..++..++.. .+...++|.+.+.+.+.. .--...-.+..+++......+...++|.+...+
T Consensus 285 kdn~qKs~Flk~Ls~~ip~fp~r----v~~~kiLP~L~~el~n~~--~vp~~LP~v~~i~~~~s~~~~~~~~~p~l~pi~ 358 (700)
T KOG2137|consen 285 KDNSQKSSFLKGLSKLIPTFPAR----VLFQKILPTLVAELVNTK--MVPIVLPLVLLIAEGLSQNEFGPKMLPALKPIY 358 (700)
T ss_pred cCcHHHHHHHHHHHHhhccCCHH----HHHHhhhhHHHHHhcccc--ccccccchhhhhhhccchhhhhhhhhHHHHHHh
Confidence 34555666666777777666543 567778888877664321 111111111222222233445667788888777
Q ss_pred c-CCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHH
Q psy14014 376 K-DECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPL 454 (615)
Q Consensus 376 ~-d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~ 454 (615)
+ .....+..-.++.++.+.+....+++.+.+ + |.+...+++...++++.++..++.
T Consensus 359 ~~~~~~~~~l~i~e~mdlL~~Kt~~e~~~~~I-----l------------------plL~~S~~~~~~~iQ~~~L~~lpt 415 (700)
T KOG2137|consen 359 SASDPKQALLFILENMDLLKEKTPPEEVKEKI-----L------------------PLLYRSLEDSDVQIQELALQILPT 415 (700)
T ss_pred ccCCcccchhhHHhhHHHHHhhCChHHHHHHH-----H------------------HHHHHHhcCcchhhHHHHHHhhhH
Confidence 6 334456666666665555555544443332 3 778888889999999999999999
Q ss_pred HHhhhChHhHHHHHHHHHHHh-cCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHH
Q psy14014 455 LAGQLGVEFFDEKLNALCMTW-LVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVL 533 (615)
Q Consensus 455 l~~~~~~~~~~~~l~~~l~~~-l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l 533 (615)
+++.+...+..+.++|.+.++ +...+..||..++-|++.+++.+..-...+.++| ++...+.+++.+-+..++....+
T Consensus 416 v~e~iD~~~vk~~ilP~l~~l~~~tt~~~vkvn~L~c~~~l~q~lD~~~v~d~~lp-i~~~~~~~dp~iv~~~~~i~~~l 494 (700)
T KOG2137|consen 416 VAESIDVPFVKQAILPRLKNLAFKTTNLYVKVNVLPCLAGLIQRLDKAAVLDELLP-ILKCIKTRDPAIVMGFLRIYEAL 494 (700)
T ss_pred HHHhccHHHHHHHHHHHhhcchhcccchHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HHHHhcCCCcHHHHHHHHHHHHH
Confidence 999998888889999999876 5677889999999999999977654333343444 44446677777777777766666
Q ss_pred Hhhh--ChhhHHHhhHHHHHhhCCCCCchH
Q psy14014 534 AEAC--GPTVTANFLLPTVLNMAGDNVANV 561 (615)
Q Consensus 534 ~~~~--~~~~~~~~i~~~l~~~~~D~~~~v 561 (615)
+-.. |.+...++++|.+.-+...+.-++
T Consensus 495 ~~~~~~g~ev~~~~VlPlli~ls~~~~L~~ 524 (700)
T KOG2137|consen 495 ALIIYSGVEVMAENVLPLLIPLSVAPSLNG 524 (700)
T ss_pred HhhcccceeeehhhhhhhhhhhhhcccccH
Confidence 5332 234556788888887665544443
No 118
>KOG1967|consensus
Probab=98.12 E-value=0.02 Score=60.51 Aligned_cols=149 Identities=17% Similarity=0.196 Sum_probs=117.9
Q ss_pred chhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhH---HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHh
Q psy14014 422 EFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFF---DEKLNALCMTWLVDHVYAIREAATLNLKKLVEQF 498 (615)
Q Consensus 422 ~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~---~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~ 498 (615)
+||.++. |.+....+......|.-...++..+..+.+.+.. .+.++|.+++.+.-++..||..+..++..+....
T Consensus 863 RfF~~iv--P~l~~~~~t~~~~~K~~yl~~LshVl~~vP~~vllp~~~~LlPLLLq~Ls~~D~~v~vstl~~i~~~l~~~ 940 (1030)
T KOG1967|consen 863 RFFCDIV--PILVSKFETAPGSQKHNYLEALSHVLTNVPKQVLLPQFPMLLPLLLQALSMPDVIVRVSTLRTIPMLLTES 940 (1030)
T ss_pred HHHHhhH--HHHHHHhccCCccchhHHHHHHHHHHhcCCHHhhccchhhHHHHHHHhcCCCccchhhhHhhhhhHHHHhc
Confidence 3455555 7777777655666788888888888887776543 3578999999999999999999999999998876
Q ss_pred Ch--HHhhhchhHHHHhhhcCCC---chHHHHHHHHHHHHHhhhChhh---HHHhhHHHHHhhCCCCCchHHHHHHHHHH
Q psy14014 499 GS--EWAQSTVIPKVVAMSRDQN---YLHRMTCLFCINVLAEACGPTV---TANFLLPTVLNMAGDNVANVRFNVAKTLQ 570 (615)
Q Consensus 499 ~~--~~~~~~i~~~l~~~~~d~~---~~~R~~a~~~l~~l~~~~~~~~---~~~~i~~~l~~~~~D~~~~vr~~a~~~l~ 570 (615)
+. ......++|.++.+..|.+ -.+|..|++|++.+.+..+... |.+.++-.+.+.+.|+-.-||..|..+=.
T Consensus 941 ~tL~t~~~~Tlvp~lLsls~~~~n~~~~VR~~ALqcL~aL~~~~P~~~l~~fr~~Vl~al~k~LdDkKRlVR~eAv~tR~ 1020 (1030)
T KOG1967|consen 941 ETLQTEHLSTLVPYLLSLSSDNDNNMMVVREDALQCLNALTRRLPTKSLLSFRPLVLRALIKILDDKKRLVRKEAVDTRQ 1020 (1030)
T ss_pred cccchHHHhHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHhccCCCcccccccHHHHHHhhhccCcHHHHHHHHHHHHhh
Confidence 54 2244679999999888776 4689999999999998766554 45678888999999999999999987754
Q ss_pred HH
Q psy14014 571 KI 572 (615)
Q Consensus 571 ~l 572 (615)
..
T Consensus 1021 ~W 1022 (1030)
T KOG1967|consen 1021 NW 1022 (1030)
T ss_pred hh
Confidence 43
No 119
>KOG0168|consensus
Probab=98.10 E-value=0.012 Score=61.55 Aligned_cols=154 Identities=14% Similarity=0.189 Sum_probs=110.1
Q ss_pred HhhhHHHHHHhhccC-chhHHHHHHHHHHHHHhhcChhh---HHHhHHHHHHHhc-CCCChHHHHHHHHHHHHHHHHhCc
Q psy14014 204 KTDIIPMFVNLAQDE-QDSVRLLAVEACVSIASLLSQSD---VEQLVMPTLRQCS-GDTSWRVRYMVADKFTDLQKAVGP 278 (615)
Q Consensus 204 ~~~ll~~l~~~~~d~-~~~vr~~a~~~l~~l~~~~~~~~---~~~~l~~~l~~~~-~d~~~~vR~~~~~~l~~l~~~~~~ 278 (615)
.+.++|.+..+++++ +.++-..|..++..+++.+|... .....+|.+.+-+ .=.--.|-+.+.+++..++.--+.
T Consensus 209 v~slvp~Lv~LL~~E~n~DIMl~AcRaltyl~evlP~S~a~vV~~~aIPvl~~kL~~IeyiDvAEQ~LqALE~iSR~H~~ 288 (1051)
T KOG0168|consen 209 VKSLVPVLVALLSHEHNFDIMLLACRALTYLCEVLPRSSAIVVDEHAIPVLLEKLLTIEYIDVAEQSLQALEKISRRHPK 288 (1051)
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhccchhheeecccchHHHHHhhhhhhhhHHHHHHHHHHHHHHhhccH
Confidence 467999999999976 67899999999999999999752 1223677765533 334456888888888888875554
Q ss_pred cchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhh
Q psy14014 279 EITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPIL 358 (615)
Q Consensus 279 ~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~ 358 (615)
......-+...+.++.==...++..|+.....+|+.++.+.. .++-+.+|.|..+++..+.++-..++-++..++..+
T Consensus 289 AiL~AG~l~a~LsylDFFSi~aQR~AlaiaaN~Cksi~sd~f--~~v~ealPlL~~lLs~~D~k~ies~~ic~~ri~d~f 366 (1051)
T KOG0168|consen 289 AILQAGALSAVLSYLDFFSIHAQRVALAIAANCCKSIRSDEF--HFVMEALPLLTPLLSYQDKKPIESVCICLTRIADGF 366 (1051)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc--hHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhc
Confidence 432222222233333222345678888888999999887654 356678999999999999999888888888887765
Q ss_pred c
Q psy14014 359 G 359 (615)
Q Consensus 359 g 359 (615)
.
T Consensus 367 ~ 367 (1051)
T KOG0168|consen 367 Q 367 (1051)
T ss_pred c
Confidence 3
No 120
>KOG2025|consensus
Probab=98.09 E-value=0.0013 Score=66.90 Aligned_cols=206 Identities=17% Similarity=0.132 Sum_probs=125.7
Q ss_pred hhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhc--hhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChh
Q psy14014 163 GVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVE--VDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQS 240 (615)
Q Consensus 163 ~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~--~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~ 240 (615)
+..+.++..+++....++..||..+++.+..+....+ ++...+.+...+...+.|..+.||..|+.+|..+-..-.++
T Consensus 81 DlV~~~f~hlLRg~Eskdk~VRfrvlqila~l~d~~~eidd~vfn~l~e~l~~Rl~Drep~VRiqAv~aLsrlQ~d~~de 160 (892)
T KOG2025|consen 81 DLVAGTFYHLLRGTESKDKKVRFRVLQILALLSDENAEIDDDVFNKLNEKLLIRLKDREPNVRIQAVLALSRLQGDPKDE 160 (892)
T ss_pred hHHHHHHHHHHhcccCcchhHHHHHHHHHHHHhccccccCHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHhcCCCCC
Confidence 4566677777788888999999999999888876432 24445667777777788999999999999998876433332
Q ss_pred hHHHhHHHHHHHh-cCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHH-HHHHhhcccc
Q psy14014 241 DVEQLVMPTLRQC-SGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKV-RDFCQNLDAY 318 (615)
Q Consensus 241 ~~~~~l~~~l~~~-~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l-~~~~~~~~~~ 318 (615)
.+ .+...+..+ -+||+..||+++...+.. .+.-.|.+....+|-+..+|..+-..+ +.+ . +..
T Consensus 161 e~--~v~n~l~~liqnDpS~EVRRaaLsnI~v----------dnsTlp~IveRarDV~~anRrlvY~r~lpki-d-~r~- 225 (892)
T KOG2025|consen 161 EC--PVVNLLKDLIQNDPSDEVRRAALSNISV----------DNSTLPCIVERARDVSGANRRLVYERCLPKI-D-LRS- 225 (892)
T ss_pred cc--cHHHHHHHHHhcCCcHHHHHHHHHhhcc----------CcccchhHHHHhhhhhHHHHHHHHHHhhhhh-h-hhh-
Confidence 21 234444443 378999999998765543 234566677777777777776543332 222 1 100
Q ss_pred chhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhc-CCChhHHHHHHHhhhH
Q psy14014 319 NQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLK-DECPEVRLNIISNLDC 392 (615)
Q Consensus 319 ~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~-d~~~~vr~~a~~~l~~ 392 (615)
.-...-.-.+.+.++|.+..||.++...+.. |--.+.+.=++-+++.+. ..+.+|+..++++|=.
T Consensus 226 ----lsi~krv~LlewgLnDRe~sVk~A~~d~il~-----~Wl~~~dgni~ElL~~ldvsnss~vavk~lealf~ 291 (892)
T KOG2025|consen 226 ----LSIDKRVLLLEWGLNDREFSVKGALVDAILS-----GWLRFSDGNILELLERLDVSNSSEVAVKALEALFS 291 (892)
T ss_pred ----hhHHHHHHHHHHhhhhhhhHHHHHHHHHHHH-----HHhhhccccHHHHHHHhccccchHHHHHHHHHHHH
Confidence 1123344556677888888888887776632 110011111222333333 3345677666666533
No 121
>KOG4413|consensus
Probab=98.07 E-value=0.0031 Score=58.17 Aligned_cols=322 Identities=16% Similarity=0.137 Sum_probs=170.0
Q ss_pred HHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccc-------hhhhHHHHHHHhhcCCc
Q psy14014 225 LAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEI-------TKTDLVQAFQMLLKDSE 297 (615)
Q Consensus 225 ~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~-------~~~~l~~~l~~~l~d~~ 297 (615)
.++.++..+...--+....+.+.|.+...+..++..|+..+++.++.+.+....+. ....+++.+..++..++
T Consensus 62 lcVscLERLfkakegahlapnlmpdLQrGLiaddasVKiLackqigcilEdcDtnaVseillvvNaeilklildcIgged 141 (524)
T KOG4413|consen 62 LCVSCLERLFKAKEGAHLAPNLMPDLQRGLIADDASVKILACKQIGCILEDCDTNAVSEILLVVNAEILKLILDCIGGED 141 (524)
T ss_pred hHHHHHHHHHhhccchhhchhhhHHHHhcccCCcchhhhhhHhhhhHHHhcCchhhHHHHHHHhhhhHHHHHHHHHcCCc
Confidence 36666666655555555566778888888888888888888888888776554221 24578899999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccchhHHHHHhhHHH-------HHHhhCCCCHHHHHHHHHHHHhhchhhc---chhhhhhh
Q psy14014 298 AEVRAAAANKVRDFCQNLDAYNQENIIMTYILPY-------VKDLVADPNQHVKSALASVIMGLSPILG---KHNTVDHL 367 (615)
Q Consensus 298 ~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~-------l~~~~~d~~~~vR~~~~~~l~~l~~~~g---~~~~~~~l 367 (615)
.+|-.+|+..+..+...- . -+..++|. +.++...-+.-+|.-..+.+-.+..+.. .+....-+
T Consensus 142 deVAkAAiesikrialfp-a------aleaiFeSellDdlhlrnlaakcndiaRvRVleLIieifSiSpesaneckkSGL 214 (524)
T KOG4413|consen 142 DEVAKAAIESIKRIALFP-A------ALEAIFESELLDDLHLRNLAAKCNDIARVRVLELIIEIFSISPESANECKKSGL 214 (524)
T ss_pred HHHHHHHHHHHHHHHhcH-H------HHHHhcccccCChHHHhHHHhhhhhHHHHHHHHHHHHHHhcCHHHHhHhhhhhH
Confidence 999999999999887531 1 11222221 1111111122333333343333322211 11122235
Q ss_pred HHHHHHhhcC-CChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHH
Q psy14014 368 LPLFLSQLKD-ECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRL 446 (615)
Q Consensus 368 ~p~l~~~l~d-~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~ 446 (615)
+..+..-++. ++.-|+..+++....+.+.-...++-.....++.+. ..|...-+|+..+.|
T Consensus 215 ldlLeaElkGteDtLVianciElvteLaeteHgreflaQeglIdlic-----------------nIIsGadsdPfekfr- 276 (524)
T KOG4413|consen 215 LDLLEAELKGTEDTLVIANCIELVTELAETEHGREFLAQEGLIDLIC-----------------NIISGADSDPFEKFR- 276 (524)
T ss_pred HHHHHHHhcCCcceeehhhHHHHHHHHHHHhhhhhhcchhhHHHHHH-----------------HHhhCCCCCcHHHHH-
Confidence 5555555543 566677777777666654332211111111111111 111111122322222
Q ss_pred HHHHHhHHHHhhhChHhHH-----------HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHh-ChHHhhhc---hhHHH
Q psy14014 447 AIIEYMPLLAGQLGVEFFD-----------EKLNALCMTWLVDHVYAIREAATLNLKKLVEQF-GSEWAQST---VIPKV 511 (615)
Q Consensus 447 ~~~~~l~~l~~~~~~~~~~-----------~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~-~~~~~~~~---i~~~l 511 (615)
++..+.+.+|++-.. ...+...+.+....+....++|+.++|.+.... |.+..... -..++
T Consensus 277 ----almgfgkffgkeaimdvseeaicealiiaidgsfEmiEmnDpdaieaAiDalGilGSnteGadlllkTgppaaehl 352 (524)
T KOG4413|consen 277 ----ALMGFGKFFGKEAIMDVSEEAICEALIIAIDGSFEMIEMNDPDAIEAAIDALGILGSNTEGADLLLKTGPPAAEHL 352 (524)
T ss_pred ----HHHHHHHHhcchHHhhcCHHHHHHHHHHHHHhhHHhhhcCCchHHHHHHHHHHhccCCcchhHHHhccCChHHHHH
Confidence 333344444443221 122333455555566667889999999987654 22222211 22234
Q ss_pred HhhhcCCCchHH-HHHHHHHHHHHhhh--ChhhH---------HHhh------------HHHHHhhCCCCCchHHHHHHH
Q psy14014 512 VAMSRDQNYLHR-MTCLFCINVLAEAC--GPTVT---------ANFL------------LPTVLNMAGDNVANVRFNVAK 567 (615)
Q Consensus 512 ~~~~~d~~~~~R-~~a~~~l~~l~~~~--~~~~~---------~~~i------------~~~l~~~~~D~~~~vr~~a~~ 567 (615)
+.-..|.|..-+ ..+++|+..++... .++.. ...+ +..+...++.+-++++..+.+
T Consensus 353 larafdqnahakqeaaihaLaaIagelrlkpeqitDgkaeerlrclifdaaaqstkldPleLFlgilqQpfpEihcAalk 432 (524)
T KOG4413|consen 353 LARAFDQNAHAKQEAAIHALAAIAGELRLKPEQITDGKAEERLRCLIFDAAAQSTKLDPLELFLGILQQPFPEIHCAALK 432 (524)
T ss_pred HHHHhcccccchHHHHHHHHHHhhccccCChhhccccHHHHHHHHHHHHHHhhccCCChHHHHHHHHcCCChhhHHHHHH
Confidence 443445555444 45677888887432 11110 0111 122333467889999999999
Q ss_pred HHHHHhHh
Q psy14014 568 TLQKIGPI 575 (615)
Q Consensus 568 ~l~~l~~~ 575 (615)
++..+...
T Consensus 433 tfTAiaaq 440 (524)
T KOG4413|consen 433 TFTAIAAQ 440 (524)
T ss_pred HHHHHHcC
Confidence 99888643
No 122
>KOG2956|consensus
Probab=98.06 E-value=0.00064 Score=65.78 Aligned_cols=191 Identities=10% Similarity=0.130 Sum_probs=129.5
Q ss_pred HHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhc---hhhhHhhhHHHHHHhhcc-CchhHHHHHHHHHHHHHhhcChhh
Q psy14014 166 AELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVE---VDYLKTDIIPMFVNLAQD-EQDSVRLLAVEACVSIASLLSQSD 241 (615)
Q Consensus 166 ~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~---~~~~~~~ll~~l~~~~~d-~~~~vr~~a~~~l~~l~~~~~~~~ 241 (615)
..+...+..+-.+....-|+.+..-|..+...-+ ++.+...|+-.+.+.+.| .++..|+.|+..+..+++.-+..-
T Consensus 286 ~~v~~~l~~~~g~e~a~~~k~alsel~~m~~e~sfsvWeq~f~~iL~~l~EvL~d~~~~~~k~laLrvL~~ml~~Q~~~l 365 (516)
T KOG2956|consen 286 ALVADLLKEISGSERASERKEALSELPKMLCEGSFSVWEQHFAEILLLLLEVLSDSEDEIIKKLALRVLREMLTNQPARL 365 (516)
T ss_pred HHHHHHHHhccCccchhHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHhchHhh
Confidence 4455666666666666777877775555443211 244456788888888888 788899999999999988766532
Q ss_pred H--HHhHHHHHHHhcCCCChHHHHHHHHHHHHH-HHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhcccc
Q psy14014 242 V--EQLVMPTLRQCSGDTSWRVRYMVADKFTDL-QKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAY 318 (615)
Q Consensus 242 ~--~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l-~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~ 318 (615)
+ ....+..+.+...|.+..|-..+.+....+ +.+.+. .....+.|.++. .+...-.++++.+..+++.++.+
T Consensus 366 ~DstE~ai~K~Leaa~ds~~~v~~~Aeed~~~~las~~P~-~~I~~i~~~Ilt----~D~~~~~~~iKm~Tkl~e~l~~E 440 (516)
T KOG2956|consen 366 FDSTEIAICKVLEAAKDSQDEVMRVAEEDCLTTLASHLPL-QCIVNISPLILT----ADEPRAVAVIKMLTKLFERLSAE 440 (516)
T ss_pred hchHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhCch-hHHHHHhhHHhc----CcchHHHHHHHHHHHHHhhcCHH
Confidence 2 233555666777888877777776665544 444332 222233444333 33333456777888888877766
Q ss_pred chhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchh
Q psy14014 319 NQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHN 362 (615)
Q Consensus 319 ~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~ 362 (615)
... .+++.+.|.+.+..++.+..||.+++-+|..+...+|.+.
T Consensus 441 eL~-~ll~diaP~~iqay~S~SS~VRKtaVfCLVamv~~vG~~~ 483 (516)
T KOG2956|consen 441 ELL-NLLPDIAPCVIQAYDSTSSTVRKTAVFCLVAMVNRVGMEE 483 (516)
T ss_pred HHH-HhhhhhhhHHHHHhcCchHHhhhhHHHhHHHHHHHHhHHh
Confidence 433 4577889999999999999999999999999998888543
No 123
>KOG4653|consensus
Probab=98.03 E-value=0.0011 Score=68.79 Aligned_cols=221 Identities=17% Similarity=0.198 Sum_probs=149.9
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhc--hhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHH
Q psy14014 167 ELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVE--VDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQ 244 (615)
Q Consensus 167 ~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~--~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~ 244 (615)
+-++.-+..+.|+...+|.+++..+..+++.-. +-.....++.++...++|++.-|--.|+..+..+++..+++
T Consensus 727 e~~qeai~sl~d~qvpik~~gL~~l~~l~e~r~~~~~~~~ekvl~i~ld~LkdedsyvyLnaI~gv~~Lcevy~e~---- 802 (982)
T KOG4653|consen 727 EPLQEAISSLHDDQVPIKGYGLQMLRHLIEKRKKATLIQGEKVLAIALDTLKDEDSYVYLNAIRGVVSLCEVYPED---- 802 (982)
T ss_pred HHHHHHHHHhcCCcccchHHHHHHHHHHHHhcchhhhhhHHHHHHHHHHHhcccCceeeHHHHHHHHHHHHhcchh----
Confidence 344455566788889999999999999988432 23345689999999999999999999999999999875543
Q ss_pred hHHHHHHH-h---cCCCChHHHHHHHHHHHHHHHHhCccc--hhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhcccc
Q psy14014 245 LVMPTLRQ-C---SGDTSWRVRYMVADKFTDLQKAVGPEI--TKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAY 318 (615)
Q Consensus 245 ~l~~~l~~-~---~~d~~~~vR~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~ 318 (615)
++|.+.+ + -+.+....|..+.+++++++...|+-. ....++..++...+|++.+-|..++.+++.++....-.
T Consensus 803 -il~dL~e~Y~s~k~k~~~d~~lkVGEai~k~~qa~Gel~~~y~~~Li~tfl~gvrepd~~~RaSS~a~lg~Lcq~~a~~ 881 (982)
T KOG4653|consen 803 -ILPDLSEEYLSEKKKLQTDYRLKVGEAILKVAQALGELVFKYKAVLINTFLSGVREPDHEFRASSLANLGQLCQLLAFQ 881 (982)
T ss_pred -hHHHHHHHHHhcccCCCccceehHHHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHHHHHHhhh
Confidence 5555544 2 222324455566677888777776543 23478888999999999899999999999999865422
Q ss_pred chhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhh---hh---hhHHHHHHhhc-CCChhHHHHHHHhhh
Q psy14014 319 NQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNT---VD---HLLPLFLSQLK-DECPEVRLNIISNLD 391 (615)
Q Consensus 319 ~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~---~~---~l~p~l~~~l~-d~~~~vr~~a~~~l~ 391 (615)
.. +++.+.+.-.+.-.-.|.+..+|++|+..+..+....|.+.. .. .+...+.+... ++++.++..+..++.
T Consensus 882 vs-d~~~ev~~~Il~l~~~d~s~~vRRaAv~li~~lL~~tg~dlLpilr~~l~Dl~~tl~~~vr~~~dd~~klhaql~le 960 (982)
T KOG4653|consen 882 VS-DFFHEVLQLILSLETTDGSVLVRRAAVHLLAELLNGTGEDLLPILRLLLIDLDETLLSYVRQHDDDGLKLHAQLCLE 960 (982)
T ss_pred hh-HHHHHHHHHHHHHHccCCchhhHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 11 133333333333445689999999999999988877774321 00 11222233333 345566777766665
Q ss_pred Hh
Q psy14014 392 CV 393 (615)
Q Consensus 392 ~l 393 (615)
.+
T Consensus 961 ei 962 (982)
T KOG4653|consen 961 EI 962 (982)
T ss_pred HH
Confidence 44
No 124
>PF05918 API5: Apoptosis inhibitory protein 5 (API5); InterPro: IPR008383 This family consists of apoptosis inhibitory protein 5 (API5) sequences from several organisms. Apoptosis or programmed cell death is a physiological form of cell death that occurs in embryonic development and organ formation. It is characterised by biochemical and morphological changes such as DNA fragmentation and cell volume shrinkage. API5 is an anti apoptosis gene located in Homo sapiens chromosome 11, whose expression prevents the programmed cell death that occurs upon the deprivation of growth factors [,].; PDB: 3U0R_A 3V6A_A.
Probab=98.01 E-value=0.0086 Score=61.18 Aligned_cols=285 Identities=19% Similarity=0.196 Sum_probs=129.2
Q ss_pred ChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCCh
Q psy14014 180 TPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSW 259 (615)
Q Consensus 180 ~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~ 259 (615)
+..+++.+++.+..+.+.++.- ....+..+..++.|++..||..|+..|..+|..-+ .+.+.+..+|.+++...+.
T Consensus 35 ~~k~K~Laaq~I~kffk~FP~l--~~~Ai~a~~DLcEDed~~iR~~aik~lp~~ck~~~--~~v~kvaDvL~QlL~tdd~ 110 (556)
T PF05918_consen 35 SPKEKRLAAQFIPKFFKHFPDL--QEEAINAQLDLCEDEDVQIRKQAIKGLPQLCKDNP--EHVSKVADVLVQLLQTDDP 110 (556)
T ss_dssp -HHHHHHHHHHHHHHHCC-GGG--HHHHHHHHHHHHT-SSHHHHHHHHHHGGGG--T----T-HHHHHHHHHHHTT---H
T ss_pred CHHHHHHHHHHHHHHHhhChhh--HHHHHHHHHHHHhcccHHHHHHHHHhHHHHHHhHH--HHHhHHHHHHHHHHhcccH
Confidence 5666677777777766666542 34456666666777777777777777766665432 2345566666666665555
Q ss_pred HHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhh--cCCcHHHHHHHHHHHHHHHhhccccchh--HHHHHhhHHHHHHh
Q psy14014 260 RVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLL--KDSEAEVRAAAANKVRDFCQNLDAYNQE--NIIMTYILPYVKDL 335 (615)
Q Consensus 260 ~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l--~d~~~~vr~~a~~~l~~~~~~~~~~~~~--~~~~~~l~p~l~~~ 335 (615)
..+..+=++|..+...-+ ...+-.++.+.. ...+..+|+.+++.|..-+..++.+... +.....+...+.+.
T Consensus 111 ~E~~~v~~sL~~ll~~d~----k~tL~~lf~~i~~~~~~de~~Re~~lkFl~~kl~~l~~~~~~p~~E~e~~i~~~ikkv 186 (556)
T PF05918_consen 111 VELDAVKNSLMSLLKQDP----KGTLTGLFSQIESSKSGDEQVRERALKFLREKLKPLKPELLTPQKEMEEFIVDEIKKV 186 (556)
T ss_dssp HHHHHHHHHHHHHHHH-H----HHHHHHHHHHHH---HS-HHHHHHHHHHHHHHGGGS-TTTS---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCc----HHHHHHHHHHHHhcccCchHHHHHHHHHHHHHHhhCcHHHhhchHHHHHHHHHHHHHH
Confidence 555555555555443211 122333333333 2445678888888886655555443222 23344555666777
Q ss_pred hCCCCHHHHHHHHHHHHhhchhhc-c--hhhhhhhHHHHHHhhc-C-----CChhHHHHHHHhhhHhhhhhchhHHHHHH
Q psy14014 336 VADPNQHVKSALASVIMGLSPILG-K--HNTVDHLLPLFLSQLK-D-----ECPEVRLNIISNLDCVNEVIGIQQWRVRL 406 (615)
Q Consensus 336 ~~d~~~~vR~~~~~~l~~l~~~~g-~--~~~~~~l~p~l~~~l~-d-----~~~~vr~~a~~~l~~l~~~~~~~~~~~~~ 406 (615)
++|....-=..+...|..+- .+| . ..-.+.+++.+.+... | .+++.-...+.++..
T Consensus 187 L~DVTaeEF~l~m~lL~~lk-~~~~~~t~~g~qeLv~ii~eQa~Ld~~f~~sD~e~Idrli~C~~~-------------- 251 (556)
T PF05918_consen 187 LQDVTAEEFELFMSLLKSLK-IYGGKQTIEGRQELVDIIEEQADLDQPFDPSDPESIDRLISCLRQ-------------- 251 (556)
T ss_dssp CTT--HHHHHHHHHHHHTSG-G---GSSHHHHHHHHHHHHHHHTTTS---SSSHHHHHHHHHHHHH--------------
T ss_pred HHhccHHHHHHHHHHHHhCc-cccccCChHHHHHHHHHHHHHhccCCCCCCcCHHHHHHHHHHHHH--------------
Confidence 77744322223333444332 222 1 1123456666665542 1 112222222222211
Q ss_pred HHHhhhhhhhhccc-cchh---hhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcC-----
Q psy14014 407 AIIEYMPLLAGQLG-VEFF---DEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLV----- 477 (615)
Q Consensus 407 ~i~~~l~~l~~~~~-~~~~---~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~----- 477 (615)
.+|.+..... ..|+ -+.+. |.+.++ ....|...+..+..++...|... ...++|.+++.|.
T Consensus 252 ----Alp~fs~~v~Sskfv~y~~~kvl-P~l~~l----~e~~kl~lLk~lAE~s~~~~~~d-~~~~L~~i~~~L~~ymP~ 321 (556)
T PF05918_consen 252 ----ALPFFSRGVSSSKFVNYMCEKVL-PKLSDL----PEDRKLDLLKLLAELSPFCGAQD-ARQLLPSIFQLLKKYMPS 321 (556)
T ss_dssp ----HGGG-BTTB--HHHHHHHHHHTC-CCTT---------HHHHHHHHHHHHHTT----T-HHHHHHHHHHHHHTTS--
T ss_pred ----hhHHhcCCCChHHHHHHHHHHhc-CChhhC----ChHHHHHHHHHHHHHcCCCCccc-HHHHHHHHHHHHHHhCCC
Confidence 1333322111 1111 11111 322222 22355567778888877777544 4445566655542
Q ss_pred -----CcchHHHHHHHHHHHHHHHH
Q psy14014 478 -----DHVYAIREAATLNLKKLVEQ 497 (615)
Q Consensus 478 -----d~~~~vR~~a~~~l~~l~~~ 497 (615)
+-+...-++.+.++..++..
T Consensus 322 ~~~~~~l~fs~vEcLL~afh~La~k 346 (556)
T PF05918_consen 322 KKTEPKLQFSYVECLLYAFHQLARK 346 (556)
T ss_dssp --------HHHHHHHHHHHHHHHTT
T ss_pred CCCCCcccchHhhHHHHHHHHHhhh
Confidence 11345556666666666654
No 125
>KOG2025|consensus
Probab=98.00 E-value=0.0011 Score=67.48 Aligned_cols=99 Identities=15% Similarity=0.167 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcc--hhhhhhhHHHHHHhhcCCC
Q psy14014 302 AAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGK--HNTVDHLLPLFLSQLKDEC 379 (615)
Q Consensus 302 ~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~--~~~~~~l~p~l~~~l~d~~ 379 (615)
...+..+..|...++....+..+++.++.++.+....++..||..++..+..+....+. +...+.+...+...+.|+.
T Consensus 60 dRIl~fla~fv~sl~q~d~e~DlV~~~f~hlLRg~Eskdk~VRfrvlqila~l~d~~~eidd~vfn~l~e~l~~Rl~Dre 139 (892)
T KOG2025|consen 60 DRILSFLARFVESLPQLDKEEDLVAGTFYHLLRGTESKDKKVRFRVLQILALLSDENAEIDDDVFNKLNEKLLIRLKDRE 139 (892)
T ss_pred HHHHHHHHHHHHhhhccCchhhHHHHHHHHHHhcccCcchhHHHHHHHHHHHHhccccccCHHHHHHHHHHHHHHHhccC
Confidence 34566667777777665555568888999999999999999999999998888764442 5566778888889999999
Q ss_pred hhHHHHHHHhhhHhhhhhchh
Q psy14014 380 PEVRLNIISNLDCVNEVIGIQ 400 (615)
Q Consensus 380 ~~vr~~a~~~l~~l~~~~~~~ 400 (615)
+.||..|+.+|+.+...-+++
T Consensus 140 p~VRiqAv~aLsrlQ~d~~de 160 (892)
T KOG2025|consen 140 PNVRIQAVLALSRLQGDPKDE 160 (892)
T ss_pred chHHHHHHHHHHHHhcCCCCC
Confidence 999999999999887544433
No 126
>PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 []. The exact function of IFRD1 is unknown but it has been shown that PC4 is necessary for muscle differentiation and that it might have a role in signal transduction. This entry also contains IFRD2 and its murine equivalent SKMc15, which are highly expressed soon after gastrulation and in the hepatic primordium, suggesting an involvement in early hematopoiesis [].
Probab=97.95 E-value=0.0022 Score=61.67 Aligned_cols=188 Identities=18% Similarity=0.209 Sum_probs=130.5
Q ss_pred HHHHHHhCCCChHHHHHHHHhHHHHHHH-hchhh---hHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcC----hhh
Q psy14014 170 SHFRNLCQDDTPMVRRAAAGKLGELAKV-VEVDY---LKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLS----QSD 241 (615)
Q Consensus 170 ~~l~~l~~d~~~~vR~~a~~~l~~l~~~-~~~~~---~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~----~~~ 241 (615)
...+..+.+.....|..++..+..+... ...+. ....+++.+...++-+..+-+..|..+++-++-.+| .+.
T Consensus 46 ~~~Id~l~eK~~~~Re~aL~~l~~~l~~~~~~d~v~~~~~tL~~~~~k~lkkg~~~E~~lA~~~l~Ll~ltlg~g~~~~e 125 (309)
T PF05004_consen 46 KEAIDLLTEKSSSTREAALEALIRALSSRYLPDFVEDRRETLLDALLKSLKKGKSEEQALAARALALLALTLGAGEDSEE 125 (309)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHhhhcCCCccHHH
Confidence 3445556788899999999988766543 22222 245677778887876666667788888888877765 356
Q ss_pred HHHhHHHHHHHhcCCCC--hHHHHHHHHHHHHHHHHhCccc-hhhhHHHHHHH-----hhc-C---------CcHHHHHH
Q psy14014 242 VEQLVMPTLRQCSGDTS--WRVRYMVADKFTDLQKAVGPEI-TKTDLVQAFQM-----LLK-D---------SEAEVRAA 303 (615)
Q Consensus 242 ~~~~l~~~l~~~~~d~~--~~vR~~~~~~l~~l~~~~~~~~-~~~~l~~~l~~-----~l~-d---------~~~~vr~~ 303 (615)
+...+.|.|.+.+.|.+ ..+|.+++.+|+-+.-..+.+. .....+..+.. ..+ | +++.+..+
T Consensus 126 i~~~~~~~L~~~l~d~s~~~~~R~~~~~aLai~~fv~~~d~~~~~~~~~~le~if~~~~~~~~~~~~~~~~~~~~~l~~a 205 (309)
T PF05004_consen 126 IFEELKPVLKRILTDSSASPKARAACLEALAICTFVGGSDEEETEELMESLESIFLLSILKSDGNAPVVAAEDDAALVAA 205 (309)
T ss_pred HHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHhcCcCCCcccccCCCccHHHHH
Confidence 67789999999988865 5688888888887766544432 12222233221 111 1 23679999
Q ss_pred HHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhh
Q psy14014 304 AANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPIL 358 (615)
Q Consensus 304 a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~ 358 (615)
|+.+++-++..++..... ...+..+|.+..+++..+..||.++.++|.-+.+..
T Consensus 206 AL~aW~lLlt~~~~~~~~-~~~~~~~~~l~~lL~s~d~~VRiAAGEaiAll~E~~ 259 (309)
T PF05004_consen 206 ALSAWALLLTTLPDSKLE-DLLEEALPALSELLDSDDVDVRIAAGEAIALLYELA 259 (309)
T ss_pred HHHHHHHHHhcCCHHHHH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHh
Confidence 999999988877654332 456778889999999999999999988887765543
No 127
>PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 []. The exact function of IFRD1 is unknown but it has been shown that PC4 is necessary for muscle differentiation and that it might have a role in signal transduction. This entry also contains IFRD2 and its murine equivalent SKMc15, which are highly expressed soon after gastrulation and in the hepatic primordium, suggesting an involvement in early hematopoiesis [].
Probab=97.93 E-value=0.0024 Score=61.39 Aligned_cols=183 Identities=19% Similarity=0.186 Sum_probs=124.2
Q ss_pred HHHHhhhcCCchHHHHHHHHhHHHHh-hhChHhHH---HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhC--h--HHh
Q psy14014 432 SIVELAEDSKWRVRLAIIEYMPLLAG-QLGVEFFD---EKLNALCMTWLVDHVYAIREAATLNLKKLVEQFG--S--EWA 503 (615)
Q Consensus 432 ~i~~~~~~~~~~vr~~~~~~l~~l~~-~~~~~~~~---~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~--~--~~~ 503 (615)
...+.+.+++...|+.++..+..+.. .+-.++.. ..+++.+.+.++-....=+..|+.+++.++-.+| . +..
T Consensus 47 ~~Id~l~eK~~~~Re~aL~~l~~~l~~~~~~d~v~~~~~tL~~~~~k~lkkg~~~E~~lA~~~l~Ll~ltlg~g~~~~ei 126 (309)
T PF05004_consen 47 EAIDLLTEKSSSTREAALEALIRALSSRYLPDFVEDRRETLLDALLKSLKKGKSEEQALAARALALLALTLGAGEDSEEI 126 (309)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHhhhcCCCccHHHH
Confidence 34455677888899999988777653 34444443 4466777777765555667788899999988876 2 234
Q ss_pred hhchhHHHHhhhcCC--CchHHHHHHHHHHHHHhhhChhh-HHH---hhHHHHHh---hCCC---------CCchHHHHH
Q psy14014 504 QSTVIPKVVAMSRDQ--NYLHRMTCLFCINVLAEACGPTV-TAN---FLLPTVLN---MAGD---------NVANVRFNV 565 (615)
Q Consensus 504 ~~~i~~~l~~~~~d~--~~~~R~~a~~~l~~l~~~~~~~~-~~~---~i~~~l~~---~~~D---------~~~~vr~~a 565 (615)
.+.+.|.|...+.|. ++..|..++.||+.+....+.+. -.. ..+..+.. .-.| +++.+..+|
T Consensus 127 ~~~~~~~L~~~l~d~s~~~~~R~~~~~aLai~~fv~~~d~~~~~~~~~~le~if~~~~~~~~~~~~~~~~~~~~~l~~aA 206 (309)
T PF05004_consen 127 FEELKPVLKRILTDSSASPKARAACLEALAICTFVGGSDEEETEELMESLESIFLLSILKSDGNAPVVAAEDDAALVAAA 206 (309)
T ss_pred HHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHhcCcCCCcccccCCCccHHHHHH
Confidence 466888888888876 45788899999999876544332 122 22331111 1122 246799999
Q ss_pred HHHHHHHhHhhhhhhH---HhhHHHHHhhhcCCCCccHHHHHHHHHHHHhhc
Q psy14014 566 AKTLQKIGPILETNVI---QSQVKPALDKLNGDTDVDVKYFAQEAISSIADS 614 (615)
Q Consensus 566 ~~~l~~l~~~~~~~~~---~~~~~~~l~~l~~d~d~~v~~~a~~a~~~~~~~ 614 (615)
..+++-+...++...+ .+...|.+..++...|.+||-.|-+++..+-|.
T Consensus 207 L~aW~lLlt~~~~~~~~~~~~~~~~~l~~lL~s~d~~VRiAAGEaiAll~E~ 258 (309)
T PF05004_consen 207 LSAWALLLTTLPDSKLEDLLEEALPALSELLDSDDVDVRIAAGEAIALLYEL 258 (309)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999988775333 333455566667888999999999999988653
No 128
>PF05918 API5: Apoptosis inhibitory protein 5 (API5); InterPro: IPR008383 This family consists of apoptosis inhibitory protein 5 (API5) sequences from several organisms. Apoptosis or programmed cell death is a physiological form of cell death that occurs in embryonic development and organ formation. It is characterised by biochemical and morphological changes such as DNA fragmentation and cell volume shrinkage. API5 is an anti apoptosis gene located in Homo sapiens chromosome 11, whose expression prevents the programmed cell death that occurs upon the deprivation of growth factors [,].; PDB: 3U0R_A 3V6A_A.
Probab=97.92 E-value=0.013 Score=59.85 Aligned_cols=260 Identities=17% Similarity=0.176 Sum_probs=137.4
Q ss_pred hhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHHHHHhCCCChH
Q psy14014 103 ETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQDDTPM 182 (615)
Q Consensus 103 ~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~~l~~d~~~~ 182 (615)
+..++..|.+-+.++.+++|. +.+.-+..+..++.|++..+|..|++-++.+|..- ++....+...|.++++..++.
T Consensus 35 ~~k~K~Laaq~I~kffk~FP~--l~~~Ai~a~~DLcEDed~~iR~~aik~lp~~ck~~-~~~v~kvaDvL~QlL~tdd~~ 111 (556)
T PF05918_consen 35 SPKEKRLAAQFIPKFFKHFPD--LQEEAINAQLDLCEDEDVQIRKQAIKGLPQLCKDN-PEHVSKVADVLVQLLQTDDPV 111 (556)
T ss_dssp -HHHHHHHHHHHHHHHCC-GG--GHHHHHHHHHHHHT-SSHHHHHHHHHHGGGG--T---T-HHHHHHHHHHHTT---HH
T ss_pred CHHHHHHHHHHHHHHHhhChh--hHHHHHHHHHHHHhcccHHHHHHHHHhHHHHHHhH-HHHHhHHHHHHHHHHhcccHH
Confidence 466777788877777777763 44555666677788888888888888888777552 345566778888899988888
Q ss_pred HHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhh--ccCchhHHHHHHHHHHHHHhhcCh------hhHHHhHHHHHHHhc
Q psy14014 183 VRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLA--QDEQDSVRLLAVEACVSIASLLSQ------SDVEQLVMPTLRQCS 254 (615)
Q Consensus 183 vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~--~d~~~~vr~~a~~~l~~l~~~~~~------~~~~~~l~~~l~~~~ 254 (615)
.+..+-.+|..+.+.-+. ..+-.+|.++. ..+++.+|+.++..+..-...++. ++....++..+.+.+
T Consensus 112 E~~~v~~sL~~ll~~d~k----~tL~~lf~~i~~~~~~de~~Re~~lkFl~~kl~~l~~~~~~p~~E~e~~i~~~ikkvL 187 (556)
T PF05918_consen 112 ELDAVKNSLMSLLKQDPK----GTLTGLFSQIESSKSGDEQVRERALKFLREKLKPLKPELLTPQKEMEEFIVDEIKKVL 187 (556)
T ss_dssp HHHHHHHHHHHHHHH-HH----HHHHHHHHHHH---HS-HHHHHHHHHHHHHHGGGS-TTTS---HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcCcH----HHHHHHHHHHHhcccCchHHHHHHHHHHHHHHhhCcHHHhhchHHHHHHHHHHHHHHH
Confidence 888888888888775432 23444444444 245678999999888654443333 344556778888888
Q ss_pred CCCChHHHHHHHHHHHHHHHHhCcc---chhhhHHHHHHHhhc------CCcHHHHHHHHHHHHHHHhhcccc----chh
Q psy14014 255 GDTSWRVRYMVADKFTDLQKAVGPE---ITKTDLVQAFQMLLK------DSEAEVRAAAANKVRDFCQNLDAY----NQE 321 (615)
Q Consensus 255 ~d~~~~vR~~~~~~l~~l~~~~~~~---~~~~~l~~~l~~~l~------d~~~~vr~~a~~~l~~~~~~~~~~----~~~ 321 (615)
.|-...==..+...|..+ ..++.. ....++++++..... -.+++.-...+.++..-...+... ..-
T Consensus 188 ~DVTaeEF~l~m~lL~~l-k~~~~~~t~~g~qeLv~ii~eQa~Ld~~f~~sD~e~Idrli~C~~~Alp~fs~~v~Sskfv 266 (556)
T PF05918_consen 188 QDVTAEEFELFMSLLKSL-KIYGGKQTIEGRQELVDIIEEQADLDQPFDPSDPESIDRLISCLRQALPFFSRGVSSSKFV 266 (556)
T ss_dssp TT--HHHHHHHHHHHHTS-GG---GSSHHHHHHHHHHHHHHHTTTS---SSSHHHHHHHHHHHHHHGGG-BTTB--HHHH
T ss_pred HhccHHHHHHHHHHHHhC-ccccccCChHHHHHHHHHHHHHhccCCCCCCcCHHHHHHHHHHHHHhhHHhcCCCChHHHH
Confidence 874321111111222221 121111 122456666654331 122333333333333322222221 112
Q ss_pred HHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhh
Q psy14014 322 NIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQL 375 (615)
Q Consensus 322 ~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l 375 (615)
.++...++|.+.++ ....|..+++.+..++...|... ...++|.+.+.|
T Consensus 267 ~y~~~kvlP~l~~l----~e~~kl~lLk~lAE~s~~~~~~d-~~~~L~~i~~~L 315 (556)
T PF05918_consen 267 NYMCEKVLPKLSDL----PEDRKLDLLKLLAELSPFCGAQD-ARQLLPSIFQLL 315 (556)
T ss_dssp HHHHHHTCCCTT---------HHHHHHHHHHHHHTT----T-HHHHHHHHHHHH
T ss_pred HHHHHHhcCChhhC----ChHHHHHHHHHHHHHcCCCCccc-HHHHHHHHHHHH
Confidence 34556666655444 55677788888988888877644 445556665554
No 129
>PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B ....
Probab=97.89 E-value=1.5e-05 Score=54.63 Aligned_cols=53 Identities=25% Similarity=0.295 Sum_probs=39.1
Q ss_pred chHHHHHHHHHHHHHhhhChh--hHHHhhHHHHHhhCCCCCchHHHHHHHHHHHH
Q psy14014 520 YLHRMTCLFCINVLAEACGPT--VTANFLLPTVLNMAGDNVANVRFNVAKTLQKI 572 (615)
Q Consensus 520 ~~~R~~a~~~l~~l~~~~~~~--~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l 572 (615)
|.+|..++.+||.+++..+.. .+.+.++|.|..+++|+++.||.+++.+|++|
T Consensus 1 p~vR~~A~~aLg~l~~~~~~~~~~~~~~~~~~L~~~L~d~~~~VR~~A~~aLg~l 55 (55)
T PF13513_consen 1 PRVRRAAAWALGRLAEGCPELLQPYLPELLPALIPLLQDDDDSVRAAAAWALGNL 55 (55)
T ss_dssp HHHHHHHHHHHHCTTTTTHHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHCH
T ss_pred CHHHHHHHHHHhhHhcccHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcC
Confidence 567888888888876554432 24567888888888888888888888888764
No 130
>PF13001 Ecm29: Proteasome stabiliser; InterPro: IPR024372 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). Ecm29 tethers the proteasome core particle to the regulatory particle, stabilising the interaction between these two components [, , ].
Probab=97.86 E-value=0.017 Score=59.99 Aligned_cols=216 Identities=16% Similarity=0.175 Sum_probs=132.2
Q ss_pred hCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHH--HhhcC-----CChhHHHHHHHhhhHhhhhhchhHHHHHHHH
Q psy14014 336 VADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFL--SQLKD-----ECPEVRLNIISNLDCVNEVIGIQQWRVRLAI 408 (615)
Q Consensus 336 ~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~--~~l~d-----~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i 408 (615)
..|++..|-..+-..+..+...+....+.+.+...+. ..-.+ .++.+|...+..|+.-.....
T Consensus 246 sad~~~~V~~~ae~~LKr~~~~~ed~~~V~~L~~Ly~G~~~~~~~~~~pa~~~lq~kIL~~L~kS~~Aa~---------- 315 (501)
T PF13001_consen 246 SADSNSSVSDRAEDLLKRLSVSLEDPDLVDRLFDLYLGKGIPPENGRPPASPRLQEKILSLLSKSVIAAT---------- 315 (501)
T ss_pred EeCCcchHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhcCCchhcCCCCCCHHHHHHHHHHHHHhHHHHh----------
Confidence 4667777877777777777766666666666666655 21111 244566666665543221110
Q ss_pred HhhhhhhhhccccchhhhhhhhHHHHHhhhcC--CchHHHHHHHHh---HHHHhhhChHhHH---HHHHHHHHHhcC---
Q psy14014 409 IEYMPLLAGQLGVEFFDEKLNALSIVELAEDS--KWRVRLAIIEYM---PLLAGQLGVEFFD---EKLNALCMTWLV--- 477 (615)
Q Consensus 409 ~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~--~~~vr~~~~~~l---~~l~~~~~~~~~~---~~l~~~l~~~l~--- 477 (615)
.++..+ ..+...+.+. +.++|..+++.+ .......+..... +.+...++..+.
T Consensus 316 --------------~~~~~~--~i~~~~l~~~~~~~klk~~~l~F~~~~~~~~~~~~~~~l~~l~~~i~~~g~p~~~~~~ 379 (501)
T PF13001_consen 316 --------------SFPNIL--QIVFDGLYSDNTNSKLKSLALQFIRGSSWIFKHISPQILKLLRPVILSQGWPLIQDSS 379 (501)
T ss_pred --------------CCccHH--HHHhccccCCccccccchhcchhhhcchHHhhhcCHHHHHHHHHHHHhcCcccccccc
Confidence 111111 2344445444 778888888888 7777766665422 333333444452
Q ss_pred -----CcchHHHHHHHHHHHHHHHHhChHHhh-hchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhhH-----HHh-
Q psy14014 478 -----DHVYAIREAATLNLKKLVEQFGSEWAQ-STVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVT-----ANF- 545 (615)
Q Consensus 478 -----d~~~~vR~~a~~~l~~l~~~~~~~~~~-~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~-----~~~- 545 (615)
......|..+.+++|.+++....-+.. -.++..|.+.+.++.+.+|.+.-.|++.+...+....- ...
T Consensus 380 ~~~~~~~~~~lR~~aYe~lG~L~~~~p~l~~~d~~li~~LF~sL~~~~~evr~sIqeALssl~~af~~~~~~~~~~~~~~ 459 (501)
T PF13001_consen 380 SQSNSSEDIELRSLAYETLGLLAKRAPSLFSKDLSLIEFLFDSLEDESPEVRVSIQEALSSLAPAFKDLPDDEDEQKRLL 459 (501)
T ss_pred ccCCCcccHHHHHHHHHHHHHHHccCcccccccHHHHHHHHHHhhCcchHHHHHHHHHHHHHHHHHhccccchhHHHHHH
Confidence 246789999999999999876543211 13566666667888999999999999999877643211 111
Q ss_pred hHHHHHhhCCCCCchHHHHHHHHHHHHhHhhh
Q psy14014 546 LLPTVLNMAGDNVANVRFNVAKTLQKIGPILE 577 (615)
Q Consensus 546 i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~ 577 (615)
..-.+.....+....+|..|++-...+.+..+
T Consensus 460 ~~~l~~~~~~~~~~~~R~~avk~an~~fpf~d 491 (501)
T PF13001_consen 460 LELLLLSYIQSEVRSCRYAAVKYANACFPFSD 491 (501)
T ss_pred HHHHHHhhccchhHHHHHHHHHHHHHhCCccc
Confidence 22233334567778899999888888876543
No 131
>PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B ....
Probab=97.86 E-value=4.4e-05 Score=52.27 Aligned_cols=53 Identities=23% Similarity=0.227 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHhhchhhcc--hhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHh
Q psy14014 341 QHVKSALASVIMGLSPILGK--HNTVDHLLPLFLSQLKDECPEVRLNIISNLDCV 393 (615)
Q Consensus 341 ~~vR~~~~~~l~~l~~~~g~--~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l 393 (615)
|.||.+++.+|+.+++..+. ..+.+.++|.+..+++|+++.||..|+.+|+.+
T Consensus 1 p~vR~~A~~aLg~l~~~~~~~~~~~~~~~~~~L~~~L~d~~~~VR~~A~~aLg~l 55 (55)
T PF13513_consen 1 PRVRRAAAWALGRLAEGCPELLQPYLPELLPALIPLLQDDDDSVRAAAAWALGNL 55 (55)
T ss_dssp HHHHHHHHHHHHCTTTTTHHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHCH
T ss_pred CHHHHHHHHHHhhHhcccHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcC
Confidence 78999999999998766554 446778999999999999999999999998753
No 132
>PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 []. Arrays of HEAT repeats consists of 3 to 36 units forming a rod-like helical structure and appear to function as protein-protein interaction surfaces. It has been noted that many HEAT repeat-containing proteins are involved in intracellular transport processes. In the crystal structure of PP2A PR65/A [], the HEAT repeats consist of pairs of antiparallel alpha helices [].; GO: 0005515 protein binding; PDB: 3FGA_A 2PF4_C 2IAE_A 2BKU_D 3EA5_B 3ND2_A 2BPT_A 2NYL_A 2NPP_D 2PKG_B ....
Probab=97.67 E-value=8.5e-05 Score=43.58 Aligned_cols=28 Identities=29% Similarity=0.311 Sum_probs=14.8
Q ss_pred HHHHHHhcCCCChHHHHHHHHHHHHHHH
Q psy14014 247 MPTLRQCSGDTSWRVRYMVADKFTDLQK 274 (615)
Q Consensus 247 ~~~l~~~~~d~~~~vR~~~~~~l~~l~~ 274 (615)
+|.+.++++|++|.||.+++.+++.+++
T Consensus 2 lp~l~~~l~D~~~~VR~~a~~~l~~i~~ 29 (31)
T PF02985_consen 2 LPILLQLLNDPSPEVRQAAAECLGAIAE 29 (31)
T ss_dssp HHHHHHHHT-SSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 4555555555555555555555555543
No 133
>PF13001 Ecm29: Proteasome stabiliser; InterPro: IPR024372 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). Ecm29 tethers the proteasome core particle to the regulatory particle, stabilising the interaction between these two components [, , ].
Probab=97.64 E-value=0.019 Score=59.66 Aligned_cols=164 Identities=10% Similarity=0.090 Sum_probs=102.0
Q ss_pred CCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCc--chHHHHHHHHHH---HHHHHHhChHHhhhchhHHH---
Q psy14014 440 SKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDH--VYAIREAATLNL---KKLVEQFGSEWAQSTVIPKV--- 511 (615)
Q Consensus 440 ~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~--~~~vR~~a~~~l---~~l~~~~~~~~~~~~i~~~l--- 511 (615)
.++.+|..++..+..-.... ...+.++..++..+..+ +..+|..++..+ ......+++.... .+-|.+
T Consensus 295 a~~~lq~kIL~~L~kS~~Aa---~~~~~~~~i~~~~l~~~~~~~klk~~~l~F~~~~~~~~~~~~~~~l~-~l~~~i~~~ 370 (501)
T PF13001_consen 295 ASPRLQEKILSLLSKSVIAA---TSFPNILQIVFDGLYSDNTNSKLKSLALQFIRGSSWIFKHISPQILK-LLRPVILSQ 370 (501)
T ss_pred CCHHHHHHHHHHHHHhHHHH---hCCccHHHHHhccccCCccccccchhcchhhhcchHHhhhcCHHHHH-HHHHHHHhc
Confidence 35566666666555432211 12245666677777666 778999999999 7777777764322 223332
Q ss_pred -Hhhhc--------CCCchHHHHHHHHHHHHHhhhChhhHH-HhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhh-
Q psy14014 512 -VAMSR--------DQNYLHRMTCLFCINVLAEACGPTVTA-NFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNV- 580 (615)
Q Consensus 512 -~~~~~--------d~~~~~R~~a~~~l~~l~~~~~~~~~~-~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~- 580 (615)
..... ..+...|..+..++|.++...+.-+.. -.++..+...+.++.+++|.++-.||..+...+....
T Consensus 371 g~p~~~~~~~~~~~~~~~~lR~~aYe~lG~L~~~~p~l~~~d~~li~~LF~sL~~~~~evr~sIqeALssl~~af~~~~~ 450 (501)
T PF13001_consen 371 GWPLIQDSSSQSNSSEDIELRSLAYETLGLLAKRAPSLFSKDLSLIEFLFDSLEDESPEVRVSIQEALSSLAPAFKDLPD 450 (501)
T ss_pred CccccccccccCCCcccHHHHHHHHHHHHHHHccCcccccccHHHHHHHHHHhhCcchHHHHHHHHHHHHHHHHHhcccc
Confidence 22332 235678999999999999876654322 2355555555689999999999999999998875321
Q ss_pred -----HHhhHHHHHhhhcCCCCccHHHHHHHH
Q psy14014 581 -----IQSQVKPALDKLNGDTDVDVKYFAQEA 607 (615)
Q Consensus 581 -----~~~~~~~~l~~l~~d~d~~v~~~a~~a 607 (615)
....+..++.....+....+|+.|..=
T Consensus 451 ~~~~~~~~~~~~l~~~~~~~~~~~~R~~avk~ 482 (501)
T PF13001_consen 451 DEDEQKRLLLELLLLSYIQSEVRSCRYAAVKY 482 (501)
T ss_pred chhHHHHHHHHHHHHhhccchhHHHHHHHHHH
Confidence 112222233333455566677766643
No 134
>COG5218 YCG1 Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell division and chromosome partitioning]
Probab=97.64 E-value=0.089 Score=52.94 Aligned_cols=159 Identities=13% Similarity=0.127 Sum_probs=87.5
Q ss_pred hccCchhHHHHHHHHHHHHHhhcCh--hhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHh
Q psy14014 215 AQDEQDSVRLLAVEACVSIASLLSQ--SDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQML 292 (615)
Q Consensus 215 ~~d~~~~vr~~a~~~l~~l~~~~~~--~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~ 292 (615)
+..++..||..+++.+..+...+++ +.....++..+.+-+-|....||..+..+|..+-..-+++. ..+...+...
T Consensus 100 ~eskdk~VR~r~lqila~~~d~v~eIDe~l~N~L~ekl~~R~~DRE~~VR~eAv~~L~~~Qe~~~nee--n~~~n~l~~~ 177 (885)
T COG5218 100 TESKDKKVRKRSLQILALLSDVVREIDEVLANGLLEKLSERLFDREKAVRREAVKVLCYYQEMELNEE--NRIVNLLKDI 177 (885)
T ss_pred ccCcchhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhccCChH--HHHHHHHHHH
Confidence 3444555666666665555555554 34444455555555555666666666666655554333321 2233333333
Q ss_pred h-cCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHH-HHHhhchhhcchhhhhhhHHH
Q psy14014 293 L-KDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALAS-VIMGLSPILGKHNTVDHLLPL 370 (615)
Q Consensus 293 l-~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~-~l~~l~~~~g~~~~~~~l~p~ 370 (615)
+ .|+..+||..|+..+.. .+.-.|++.+...|.+-..|+.+.. .|..++.... ....+.+. .
T Consensus 178 vqnDPS~EVRr~allni~v--------------dnsT~p~IlERarDv~~anRr~vY~r~Lp~iGd~~~-lsi~kri~-l 241 (885)
T COG5218 178 VQNDPSDEVRRLALLNISV--------------DNSTYPCILERARDVSGANRRMVYERCLPRIGDLKS-LSIDKRIL-L 241 (885)
T ss_pred HhcCcHHHHHHHHHHHeee--------------CCCcchhHHHHhhhhhHHHHHHHHHHHhhhhcchhh-ccccceeh-h
Confidence 3 47778888877765532 1335688888888888777765533 3344332110 01112222 5
Q ss_pred HHHhhcCCChhHHHHHHHhhh
Q psy14014 371 FLSQLKDECPEVRLNIISNLD 391 (615)
Q Consensus 371 l~~~l~d~~~~vr~~a~~~l~ 391 (615)
+...+.|++..|+.++...+.
T Consensus 242 ~ewgl~dRe~sv~~a~~d~ia 262 (885)
T COG5218 242 MEWGLLDREFSVKGALVDAIA 262 (885)
T ss_pred hhhcchhhhhhHHHHHHHHHH
Confidence 556778888888888877664
No 135
>PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 []. Arrays of HEAT repeats consists of 3 to 36 units forming a rod-like helical structure and appear to function as protein-protein interaction surfaces. It has been noted that many HEAT repeat-containing proteins are involved in intracellular transport processes. In the crystal structure of PP2A PR65/A [], the HEAT repeats consist of pairs of antiparallel alpha helices [].; GO: 0005515 protein binding; PDB: 3FGA_A 2PF4_C 2IAE_A 2BKU_D 3EA5_B 3ND2_A 2BPT_A 2NYL_A 2NPP_D 2PKG_B ....
Probab=97.60 E-value=9.7e-05 Score=43.32 Aligned_cols=28 Identities=21% Similarity=0.400 Sum_probs=13.6
Q ss_pred hHHHHhhhcCCCchHHHHHHHHHHHHHh
Q psy14014 508 IPKVVAMSRDQNYLHRMTCLFCINVLAE 535 (615)
Q Consensus 508 ~~~l~~~~~d~~~~~R~~a~~~l~~l~~ 535 (615)
+|.+.++++|+++.||.+|+.+++.+++
T Consensus 2 lp~l~~~l~D~~~~VR~~a~~~l~~i~~ 29 (31)
T PF02985_consen 2 LPILLQLLNDPSPEVRQAAAECLGAIAE 29 (31)
T ss_dssp HHHHHHHHT-SSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 4444555555555555555555555443
No 136
>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional
Probab=97.56 E-value=0.14 Score=60.31 Aligned_cols=278 Identities=10% Similarity=0.067 Sum_probs=160.9
Q ss_pred hHHHHHHHhhcCCCcchhhhHHhhhhhhccCCC---h----hhHHHHHHHHHH-HhCCCChHHHHHHHHhHHHHHHHhch
Q psy14014 129 HFVPLVQRLASGDWFTSRTSACGLFSVCYPRVT---A----GVKAELRSHFRN-LCQDDTPMVRRAAAGKLGELAKVVEV 200 (615)
Q Consensus 129 ~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~---~----~~~~~l~~~l~~-l~~d~~~~vR~~a~~~l~~l~~~~~~ 200 (615)
.+-+++.....+.+..++..|+..+..++..+- + ..+++++.-|.. +....+.+||..+++++..+....+.
T Consensus 1137 ~l~~hf~~vg~~~n~~va~fAidsLrQLs~kfle~eEL~~f~FQkefLkPfe~im~~s~~~eVrE~ILeCv~qmI~s~~~ 1216 (1780)
T PLN03076 1137 VLSDFFVTIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVN 1216 (1780)
T ss_pred HHHHHHHHhcCCcchhHHHHHHHHHHHHHHHhcchhhhhchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHh
Confidence 344444444334445566666666655544331 1 245666655544 33456789999999999988776554
Q ss_pred --hhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhh-cC---h--hhHHHhHHHHHHHhcCCC-ChHHHHHHHHHHHH
Q psy14014 201 --DYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASL-LS---Q--SDVEQLVMPTLRQCSGDT-SWRVRYMVADKFTD 271 (615)
Q Consensus 201 --~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~-~~---~--~~~~~~l~~~l~~~~~d~-~~~vR~~~~~~l~~ 271 (615)
...|..++.++.....++.+.+-..|.+++..+... ++ . ......++..+.++.+.. +..+--.++..|..
T Consensus 1217 nIkSGWktIF~VLs~aa~d~~e~iV~lAFetl~~I~~d~f~~l~~~~~~~F~DlV~cL~~Fa~q~~~~nISL~AI~lL~~ 1296 (1780)
T PLN03076 1217 NVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIREYFPYITETETTTFTDCVNCLIAFTNSRFNKDISLNAIAFLRF 1296 (1780)
T ss_pred hhhcCcHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHhCcCcccccHHHHHHHHH
Confidence 235788999998888888888888889988776543 22 1 233445666666655432 23333344444443
Q ss_pred HHHHhC-----------------------------------ccchhhhHHHHH---HHhhcCCcHHHHHHHHHHHHHHHh
Q psy14014 272 LQKAVG-----------------------------------PEITKTDLVQAF---QMLLKDSEAEVRAAAANKVRDFCQ 313 (615)
Q Consensus 272 l~~~~~-----------------------------------~~~~~~~l~~~l---~~~l~d~~~~vr~~a~~~l~~~~~ 313 (615)
++..+- .+....-.+|+| ..+..|+.++||..|+..|=.++.
T Consensus 1297 ~~~~La~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~lW~pLL~~Ls~l~~D~RlEVR~~ALqtLF~iL~ 1376 (1780)
T PLN03076 1297 CATKLAEGDLGSSSRNKDKEAPPSSPQSGKDGKQESGEFTDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFDTLR 1376 (1780)
T ss_pred HHHHHHhccccccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Confidence 322220 000001234443 445679999999999999877776
Q ss_pred hccccchhH----HHHHhhHHHHHHhhC----------------------CCCHHHHHHHHHHHHhhchhhcc-----hh
Q psy14014 314 NLDAYNQEN----IIMTYILPYVKDLVA----------------------DPNQHVKSALASVIMGLSPILGK-----HN 362 (615)
Q Consensus 314 ~~~~~~~~~----~~~~~l~p~l~~~~~----------------------d~~~~vR~~~~~~l~~l~~~~g~-----~~ 362 (615)
..+.....+ .+...++|.+..+-. +.+.....++..++..++..+.. ..
T Consensus 1377 ~yG~~Fs~~~W~~if~~VLFPIFd~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~Wl~eT~~~AL~~lvdLft~fFd~L~~ 1456 (1780)
T PLN03076 1377 NHGHLFSLPLWERVFESVLFPIFDYVRHAIDPSGGDEPEGQGVDGDQGELDQDAWLYETCTLALQLVVDLFVKFYPTVNP 1456 (1780)
T ss_pred HhhccCCHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655443321 234456666544210 01112356667777777666553 11
Q ss_pred hhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhh----hhchhHHHHHH
Q psy14014 363 TVDHLLPLFLSQLKDECPEVRLNIISNLDCVNE----VIGIQQWRVRL 406 (615)
Q Consensus 363 ~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~----~~~~~~~~~~~ 406 (615)
..+.++..+..++..+++.+-.....+|..++. .+.++.|.+-.
T Consensus 1457 ~L~~~l~ll~~ci~q~n~~la~ig~~~l~~li~~ng~~F~~~~W~~i~ 1504 (1780)
T PLN03076 1457 LLKKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGHLFSDEKWLEVV 1504 (1780)
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHhhccCCHHHHHHHH
Confidence 233344445555666777777777777777654 34667888655
No 137
>KOG1517|consensus
Probab=97.52 E-value=0.0024 Score=67.88 Aligned_cols=212 Identities=15% Similarity=0.099 Sum_probs=142.6
Q ss_pred hhhhHHhhhhhhccCCC----hhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhc---hhhhHhhhHHHHHHhhcc
Q psy14014 145 SRTSACGLFSVCYPRVT----AGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVE---VDYLKTDIIPMFVNLAQD 217 (615)
Q Consensus 145 ~r~~a~~~l~~~~~~~~----~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~---~~~~~~~ll~~l~~~~~d 217 (615)
.|.-|..+++.+...-+ -..--.|+|+.+++++.+..+.|-..+-....+...-+ .+..++.....|.+.+.+
T Consensus 486 HRlRAL~LL~RFLDlGpWAV~LaLsVGIFPYVLKLLQS~a~ELrpiLVFIWAKILAvD~SCQ~dLvKe~g~~YF~~vL~~ 565 (1387)
T KOG1517|consen 486 HRLRALVLLARFLDLGPWAVDLALSVGIFPYVLKLLQSSARELRPILVFIWAKILAVDPSCQADLVKENGYKYFLQVLDP 565 (1387)
T ss_pred HHHHHHHHHHHHhccchhhhhhhhccchHHHHHHHhccchHhhhhhHHHHHHHHHhcCchhHHHHHhccCceeEEEEecC
Confidence 46667777777754432 11223588999999999999999887776666654321 133333344445555554
Q ss_pred -C--chhHHHHHHHHHHHHHhhcCh--h-hHHHhHHHHHHHhcCCC-ChHHHHHHHHHHHHHHHHhCccc---hhhhHHH
Q psy14014 218 -E--QDSVRLLAVEACVSIASLLSQ--S-DVEQLVMPTLRQCSGDT-SWRVRYMVADKFTDLQKAVGPEI---TKTDLVQ 287 (615)
Q Consensus 218 -~--~~~vr~~a~~~l~~l~~~~~~--~-~~~~~l~~~l~~~~~d~-~~~vR~~~~~~l~~l~~~~~~~~---~~~~l~~ 287 (615)
+ +++-|..|.-.|..++..+.- + .....++.+..+.++|+ .|-.|.-++-+||.+=..+...- .......
T Consensus 566 ~~~~~~EqrtmaAFVLAviv~nf~lGQ~acl~~~li~iCle~lnd~~~pLLrQW~~icLG~LW~d~~~Arw~G~r~~Ahe 645 (1387)
T KOG1517|consen 566 SQAIPPEQRTMAAFVLAVIVRNFKLGQKACLNGNLIGICLEHLNDDPEPLLRQWLCICLGRLWEDYDEARWSGRRDNAHE 645 (1387)
T ss_pred cCCCCHHHHHHHHHHHHHHHcccchhHHHhccccHHHHHHHHhcCCccHHHHHHHHHHHHHHhhhcchhhhccccccHHH
Confidence 2 357888888899999888753 2 23345777888888884 79999999999999866543221 1234556
Q ss_pred HHHHhhcCCcHHHHHHHHHHHHHHHhhccccchh--------------HHHHHhhHH----HHHHhhCCCCHHHHHHHHH
Q psy14014 288 AFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQE--------------NIIMTYILP----YVKDLVADPNQHVKSALAS 349 (615)
Q Consensus 288 ~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~--------------~~~~~~l~p----~l~~~~~d~~~~vR~~~~~ 349 (615)
.++.++.|+-++||.+|+.+|+.|+........+ ....+.+++ .+..+++|.++-||..++.
T Consensus 646 kL~~~LsD~vpEVRaAAVFALgtfl~~~~d~fde~~~~~~~~~~l~~~~~~~E~~i~~~~~~ll~~vsdgsplvr~ev~v 725 (1387)
T KOG1517|consen 646 KLILLLSDPVPEVRAAAVFALGTFLSNGSDNFDEQTLVVEEEIDLDDERTSIEDLIIKGLMSLLALVSDGSPLVRTEVVV 725 (1387)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHhcccccccchhhhhhhhhhcchhhhhhHHHHHHhhHHHHHHHHhccchHHHHHHHH
Confidence 6888899999999999999999999864221110 111233333 4556788889999988888
Q ss_pred HHHhhch
Q psy14014 350 VIMGLSP 356 (615)
Q Consensus 350 ~l~~l~~ 356 (615)
+++.++.
T Consensus 726 ~ls~~~~ 732 (1387)
T KOG1517|consen 726 ALSHFVV 732 (1387)
T ss_pred HHHHHHH
Confidence 8776643
No 138
>COG5116 RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]
Probab=97.52 E-value=0.0058 Score=60.69 Aligned_cols=273 Identities=17% Similarity=0.158 Sum_probs=150.1
Q ss_pred HHHHHHHhcCccHHHHHH---HHhcHHHHHHHhCcchhhccchhhhhhhcCCcH--HHHHHHHHHhccccCCCCCcchhh
Q psy14014 15 IAVLIDELKNEDVQLRLN---SIKKLSTIALALGQERTRGELIPFLTETIYDED--EVLLALAEQLGTFTPNVGGPEYVH 89 (615)
Q Consensus 15 i~~ll~~l~s~d~~~R~~---a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~--~vr~~a~~~l~~l~~~~~~~~~~~ 89 (615)
-+.+-+.+-+++...|.. |+-.++-+--.+|.+ ..+.|...+... +|+. ++...++--+|-.. ++. .-.
T Consensus 372 ~~il~pYLP~e~ass~~~eGGalyalGLI~Agfgr~-~TeYL~e~~~~t-eDe~~~~l~yG~~LGiGL~~--MgS--an~ 445 (926)
T COG5116 372 YEILKPYLPSEVASSRQKEGGALYALGLIKAGFGRE-DTEYLLEYFLDT-EDELTPELAYGVCLGIGLIN--MGS--ANR 445 (926)
T ss_pred hHhhhccCCcccchhhhccCceeeeehhhccCcCcc-cHHHHHHHhCcc-cccccHHHHHHHHhhhcchh--ccc--ccH
Confidence 344445666666655553 333444443334444 333443222111 1222 25555554444322 111 124
Q ss_pred hchHHHhhhhcCchhHHHHHHHHHHHHHHhh-cChhHHhhhHHHHHHHhhcCCCc-c-hhhhHHhhhhhhccCCChhhHH
Q psy14014 90 CLLPPLESLATVEETVVRDKAVESLRLISAQ-HSPHDLEAHFVPLVQRLASGDWF-T-SRTSACGLFSVCYPRVTAGVKA 166 (615)
Q Consensus 90 ~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~-~~~~~~~~~~l~~l~~l~~~~~~-~-~r~~a~~~l~~~~~~~~~~~~~ 166 (615)
.+..-++.++.++....-++|.-.++-++-- .+.+ .+.-+...++.... + .|-.++.+ .+.....+++
T Consensus 446 eiye~lKe~l~nD~a~~geAa~~gMGl~mLgt~s~e-----ai~dm~tya~ETqhe~i~Rglgig~--aLi~ygrqe~-- 516 (926)
T COG5116 446 EIYEKLKELLKNDRALLGEAAVYGMGLLMLGTWSVE-----AIEDMRTYAGETQHERIKRGLGIGF--ALILYGRQEM-- 516 (926)
T ss_pred HHHHHHHHHHhcchhhhhhhhhhccceeeecCCCHH-----HHHHHHHHhcchhhhhHHhhhhhhh--hHhhhhhHHH--
Confidence 5666777777777666666666555543221 1222 12223333333221 1 12222211 1111111121
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHh-hccCchhHHHHHHHHHHHHHhhcChhhHHHh
Q psy14014 167 ELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNL-AQDEQDSVRLLAVEACVSIASLLSQSDVEQL 245 (615)
Q Consensus 167 ~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~-~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~ 245 (615)
.-.++..++.|.++..|..-+-+++.-...-+. ..++.-+... .+|.++.||++|+-+++-++-. ...
T Consensus 517 -add~I~ell~d~ds~lRy~G~fs~alAy~GTgn----~~vv~~lLh~avsD~nDDVrRAAViAlGfvc~~------D~~ 585 (926)
T COG5116 517 -ADDYINELLYDKDSILRYNGVFSLALAYVGTGN----LGVVSTLLHYAVSDGNDDVRRAAVIALGFVCCD------DRD 585 (926)
T ss_pred -HHHHHHHHhcCchHHhhhccHHHHHHHHhcCCc----chhHhhhheeecccCchHHHHHHHHheeeeEec------Ccc
Confidence 223556778999999999876665432221222 2333333343 6899999999999988865421 122
Q ss_pred HHHHHHHh-cCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccc
Q psy14014 246 VMPTLRQC-SGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDA 317 (615)
Q Consensus 246 l~~~l~~~-~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~ 317 (615)
.++-..++ .++-++.||...+-+||-.+...|.+ ..+.++..+..|++.-||++|+-+++.+.-...+
T Consensus 586 ~lv~tvelLs~shN~hVR~g~AvaLGiacag~G~~----~a~diL~~L~~D~~dfVRQ~AmIa~~mIl~Q~n~ 654 (926)
T COG5116 586 LLVGTVELLSESHNFHVRAGVAVALGIACAGTGDK----VATDILEALMYDTNDFVRQSAMIAVGMILMQCNP 654 (926)
T ss_pred hhhHHHHHhhhccchhhhhhhHHHhhhhhcCCccH----HHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcCc
Confidence 34444444 44567899999999999988776653 5677788889999999999999999988765543
No 139
>KOG1525|consensus
Probab=97.50 E-value=0.023 Score=63.86 Aligned_cols=334 Identities=16% Similarity=0.111 Sum_probs=175.6
Q ss_pred CcchHHHHH---HHhcCccHHHHHHHHhcHHHHHHHhCcch---------hhccchhhhhhhcCCcHH--HHH-HHHHHh
Q psy14014 11 SLYPIAVLI---DELKNEDVQLRLNSIKKLSTIALALGQER---------TRGELIPFLTETIYDEDE--VLL-ALAEQL 75 (615)
Q Consensus 11 ~~~~i~~ll---~~l~s~d~~~R~~a~~~l~~~~~~~~~~~---------~~~~ll~~l~~~~~~~~~--vr~-~a~~~l 75 (615)
++.|+..-| .-|+|+|.++|.-..=+++++-+.+.|+. +...++..+..+.+..++ -|+ ...+.+
T Consensus 45 ~~~pl~~~l~~~~~L~h~d~dvrllvacCvseilRi~aPeaPy~~~~lkdIf~~~~~q~~gL~d~~sp~f~r~~~lletl 124 (1266)
T KOG1525|consen 45 SLLPLADHLIKDFLLKHKDKDVRLLVACCVSEILRIYAPEAPYTDEQLKDIFQLILSQFSGLGDVESPYFKRYFYLLETL 124 (1266)
T ss_pred HHHHHHHHHhhHHHhcCCCcChhHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHH
Confidence 345555544 33889999999999999999988777763 111122222222222223 222 122222
Q ss_pred cc-----ccCCCCCcchhhhchHHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHH-HhhcCC---Ccchh
Q psy14014 76 GT-----FTPNVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQ-RLASGD---WFTSR 146 (615)
Q Consensus 76 ~~-----l~~~~~~~~~~~~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~-~l~~~~---~~~~r 146 (615)
.. ++......+..+.+..++..++.++.+.--..-...+..+.... +.+...++.++. .+.... ....+
T Consensus 125 ~~~k~~l~~~l~d~~e~~~~~f~~f~d~~~~~~~~~v~~~~~i~~~li~e~--d~v~~e~L~~ll~~lv~~~~~~~~~a~ 202 (1266)
T KOG1525|consen 125 AKVKFCLLMLLEDCQELVHELFRTFFDLARKGHPKKVFNMLDIAIMLITEE--DTVQSELLDVLLENLVKPGRDTIKEAD 202 (1266)
T ss_pred HHhHHHheeeccchHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhh--ccchHHHHHHHHHHhccCCCCccHHHH
Confidence 21 12222234566666667766665544432223333333333332 233344444443 333322 23344
Q ss_pred hhHHhhhhhhccCCChhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHH
Q psy14014 147 TSACGLFSVCYPRVTAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLA 226 (615)
Q Consensus 147 ~~a~~~l~~~~~~~~~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a 226 (615)
..|..++..+...+.+...+.+...+...-. .-..++...-+.+-.+....+. ....++|.+..-+..++..+|..|
T Consensus 203 ~la~~li~~~a~~~~~~i~~f~~~~~~~~~s-~~~~~~~~~he~i~~L~~~~p~--ll~~vip~l~~eL~se~~~~Rl~a 279 (1266)
T KOG1525|consen 203 KLASDLIERCADNLEDTIANFLNSCLTEYKS-RQSSLKIKYHELILELWRIAPQ--LLLAVIPQLEFELLSEQEEVRLKA 279 (1266)
T ss_pred HHHHHHHHHhhhhhchhHHHHHHHHHhhccc-cccchhhHHHHHHHHHHHhhHH--HHHHHHHHHHHHHhcchHHHHHHH
Confidence 4455555555555554444433333322221 1122333344445555444433 245577777777778889999999
Q ss_pred HHHHHHHHhhcChhhH--HHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHH-HHHHhhcCCcHHHHHH
Q psy14014 227 VEACVSIASLLSQSDV--EQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQ-AFQMLLKDSEAEVRAA 303 (615)
Q Consensus 227 ~~~l~~l~~~~~~~~~--~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~-~l~~~l~d~~~~vr~~ 303 (615)
+..++.+...-+.... .+.++..+..-+.|.+..||..+.++.......-+ ...+-.. .+.-...|.++.+|..
T Consensus 280 ~~lvg~~~~~~~~~l~~~~~~~~~~fl~r~~D~~~~vR~~~v~~~~~~l~~~~---~~~~~~~~~~~l~~~~~D~~~rir 356 (1266)
T KOG1525|consen 280 VKLVGRMFSDKDSQLSETYDDLWSAFLGRFNDISVEVRMECVESIKQCLLNNP---SIAKASTILLALRERDLDEDVRVR 356 (1266)
T ss_pred HHHHHHHHhcchhhhcccchHHHHHHHHHhccCChhhhhhHHHHhHHHHhcCc---hhhhHHHHHHHHHhhcCChhhhhe
Confidence 9999887655443222 34466667777889999999999988776544311 1112111 1222224555555543
Q ss_pred HHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhch
Q psy14014 304 AANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSP 356 (615)
Q Consensus 304 a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~ 356 (615)
....+.. +......-.+.+.++..+.+.+.|..|.||..|...+..+-+
T Consensus 357 ~~v~i~~----~~v~~~~l~~~~~ll~~~~eR~rDKk~~VR~~Am~~LaqlYk 405 (1266)
T KOG1525|consen 357 TQVVIVA----CDVMKFKLVYIPLLLKLVAERLRDKKIKVRKQAMNGLAQLYK 405 (1266)
T ss_pred eeEEEEE----eehhHhhhhhhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 2211111 111111111223377777888999999999999998887765
No 140
>KOG1949|consensus
Probab=97.45 E-value=0.13 Score=52.84 Aligned_cols=144 Identities=20% Similarity=0.224 Sum_probs=105.5
Q ss_pred hHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccch---hh----hHHHHHHHhhcCCcHHHHHHHHHHHHHHHh----
Q psy14014 245 LVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEIT---KT----DLVQAFQMLLKDSEAEVRAAAANKVRDFCQ---- 313 (615)
Q Consensus 245 ~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~---~~----~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~---- 313 (615)
..-|++...++-++..||..++..+-.+....+++.. ++ .-...+.++++|+.|.||..|+..+..+..
T Consensus 174 L~~p~l~R~L~a~Ns~VrsnAa~lf~~~fP~~dpd~~~e~mD~i~~kQf~~l~~LL~d~~p~VRS~a~~gv~k~~s~fWe 253 (1005)
T KOG1949|consen 174 LYKPILWRGLKARNSEVRSNAALLFVEAFPIRDPDLHAEEMDSIIQKQFEELYSLLEDPYPMVRSTAILGVCKITSKFWE 253 (1005)
T ss_pred HHhHHHHHhhccCchhhhhhHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH
Confidence 3557777888899999999999999888877776642 22 234457789999999999988877655443
Q ss_pred hccccchhHHHHHhhHHHH-HHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhH
Q psy14014 314 NLDAYNQENIIMTYILPYV-KDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDC 392 (615)
Q Consensus 314 ~~~~~~~~~~~~~~l~p~l-~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~ 392 (615)
.+|+ ..+..++..+ ..+..|....||.+..+.+..+...--.-...++++|.+-..+.|.+..||.++..-+..
T Consensus 254 ~iP~-----~i~~~ll~kI~d~~a~dt~s~VR~svf~gl~~~l~np~sh~~le~~Lpal~~~l~D~se~VRvA~vd~ll~ 328 (1005)
T KOG1949|consen 254 MIPP-----TILIDLLKKITDELAFDTSSDVRCSVFKGLPMILDNPLSHPLLEQLLPALRYSLHDNSEKVRVAFVDMLLK 328 (1005)
T ss_pred HcCH-----HHHHHHHHHHHHHhhhccchheehhHhcCcHHHHcCccchhHHHHHHHhcchhhhccchhHHHHHHHHHHH
Confidence 2332 2233344433 345667888999999998888765443345677899999999999999999999887765
Q ss_pred h
Q psy14014 393 V 393 (615)
Q Consensus 393 l 393 (615)
+
T Consensus 329 i 329 (1005)
T KOG1949|consen 329 I 329 (1005)
T ss_pred H
Confidence 4
No 141
>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional
Probab=97.42 E-value=0.37 Score=57.07 Aligned_cols=314 Identities=11% Similarity=0.126 Sum_probs=168.0
Q ss_pred HHHHHHhHHHHHHHhch------hhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChh------hHHHhHHHHHH
Q psy14014 184 RRAAAGKLGELAKVVEV------DYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQS------DVEQLVMPTLR 251 (615)
Q Consensus 184 R~~a~~~l~~l~~~~~~------~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~------~~~~~l~~~l~ 251 (615)
|..++.-|.+++.+--. ...|..+-+.|.+...+.+..++..|+..|..++..+-+. .+...++..+.
T Consensus 1109 r~FsLqKLveIa~~Nm~Rirl~W~~iW~~l~~hf~~vg~~~n~~va~fAidsLrQLs~kfle~eEL~~f~FQkefLkPfe 1188 (1780)
T PLN03076 1109 RVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFV 1188 (1780)
T ss_pred chhHHHHHHHHHHhcccchheehHhHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHhcchhhhhchhHHHHHHHHHH
Confidence 66677777777654322 3345556667777666777889999999988887755432 22334444444
Q ss_pred Hh-cCCCChHHHHHHHHHHHHHHHHhCccch--hhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccc-cch-hHHHHH
Q psy14014 252 QC-SGDTSWRVRYMVADKFTDLQKAVGPEIT--KTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDA-YNQ-ENIIMT 326 (615)
Q Consensus 252 ~~-~~d~~~~vR~~~~~~l~~l~~~~~~~~~--~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~-~~~-~~~~~~ 326 (615)
.. .+..+..+|..+++++..+....+.... -..++.++.....++++.+-..|...+..+....-. -.. ......
T Consensus 1189 ~im~~s~~~eVrE~ILeCv~qmI~s~~~nIkSGWktIF~VLs~aa~d~~e~iV~lAFetl~~I~~d~f~~l~~~~~~~F~ 1268 (1780)
T PLN03076 1189 IVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIREYFPYITETETTTFT 1268 (1780)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHHHHhhhhcCcHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHhhhhhccccchhHHH
Confidence 43 3456779999999999998876554432 234666777677788888888888888776653111 000 001223
Q ss_pred hhHHHHHHhhCCC-CHHHHHHHHHHHHhhchhh-----------------------------------cchhhhhhhHHH
Q psy14014 327 YILPYVKDLVADP-NQHVKSALASVIMGLSPIL-----------------------------------GKHNTVDHLLPL 370 (615)
Q Consensus 327 ~l~p~l~~~~~d~-~~~vR~~~~~~l~~l~~~~-----------------------------------g~~~~~~~l~p~ 370 (615)
.++.++.+..+.. +.++--.++..+..++..+ +.+......+|.
T Consensus 1269 DlV~cL~~Fa~q~~~~nISL~AI~lL~~~~~~La~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~lW~pL 1348 (1780)
T PLN03076 1269 DCVNCLIAFTNSRFNKDISLNAIAFLRFCATKLAEGDLGSSSRNKDKEAPPSSPQSGKDGKQESGEFTDKDDHLYFWFPL 1348 (1780)
T ss_pred HHHHHHHHHHhCcCcccccHHHHHHHHHHHHHHHhccccccccccccccccccccccccccccccccccchhHHHHHHHH
Confidence 3444444433321 2222222333333221111 011112234555
Q ss_pred HHH---hhcCCChhHHHHHHHhhhHhhhhh----chhHHHHHHHHHhh-hhhhhhccccchhhhhhhh---HHHH---Hh
Q psy14014 371 FLS---QLKDECPEVRLNIISNLDCVNEVI----GIQQWRVRLAIIEY-MPLLAGQLGVEFFDEKLNA---LSIV---EL 436 (615)
Q Consensus 371 l~~---~l~d~~~~vr~~a~~~l~~l~~~~----~~~~~~~~~~i~~~-l~~l~~~~~~~~~~~~l~~---~~i~---~~ 436 (615)
+.. +..|+..+||..|+..|=.+.... +.+.|..-.. .+ .|.+. .+........... ..+. .-
T Consensus 1349 L~~Ls~l~~D~RlEVR~~ALqtLF~iL~~yG~~Fs~~~W~~if~--~VLFPIFd-~l~~~~~~~~~~~~~~~~~~~~~~~ 1425 (1780)
T PLN03076 1349 LAGLSELSFDPRPEIRKSALQVLFDTLRNHGHLFSLPLWERVFE--SVLFPIFD-YVRHAIDPSGGDEPEGQGVDGDQGE 1425 (1780)
T ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHH--HHHHHHHH-HHHHhhccccccccccccccccccc
Confidence 554 456888999999999876555433 4455653220 01 11111 0000000000000 0000 00
Q ss_pred hhcCCchHHHHHHHHhHHHHhhhChHh-----HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChH
Q psy14014 437 AEDSKWRVRLAIIEYMPLLAGQLGVEF-----FDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSE 501 (615)
Q Consensus 437 ~~~~~~~vr~~~~~~l~~l~~~~~~~~-----~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~ 501 (615)
.+...| +.++...++..+...+...+ ..+.++..+..++..++..+-..+..++..++...|..
T Consensus 1426 ~e~~~W-l~eT~~~AL~~lvdLft~fFd~L~~~L~~~l~ll~~ci~q~n~~la~ig~~~l~~li~~ng~~ 1494 (1780)
T PLN03076 1426 LDQDAW-LYETCTLALQLVVDLFVKFYPTVNPLLKKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGHL 1494 (1780)
T ss_pred hhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHhhcc
Confidence 011224 46666677777666554422 23444444555566788889999999999999877653
No 142
>PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II
Probab=97.41 E-value=0.084 Score=49.40 Aligned_cols=233 Identities=11% Similarity=0.085 Sum_probs=138.1
Q ss_pred HHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhh----hhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhc--hhHHHHH
Q psy14014 332 VKDLVADPNQHVKSALASVIMGLSPILGKHNTVD----HLLPLFLSQLKDECPEVRLNIISNLDCVNEVIG--IQQWRVR 405 (615)
Q Consensus 332 l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~----~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~--~~~~~~~ 405 (615)
|...++++++.+|..+...|+.+...+.++.... .+...+...+. ++..-..++.++..+.+.-. .+.. .
T Consensus 4 Lg~~Ltsed~~~R~ka~~~Ls~vL~~lp~~~L~~~ev~~L~~F~~~rl~--D~~~~~~~l~gl~~L~~~~~~~~~~~-~- 79 (262)
T PF14500_consen 4 LGEYLTSEDPIIRAKALELLSEVLERLPPDFLSRQEVQVLLDFFCSRLD--DHACVQPALKGLLALVKMKNFSPESA-V- 79 (262)
T ss_pred hhhhhCCCCHHHHHHHHHHHHHHHHhCCHhhccHHHHHHHHHHHHHHhc--cHhhHHHHHHHHHHHHhCcCCChhhH-H-
Confidence 4456788999999999999988887776544433 33444444443 34444444666666653221 1110 0
Q ss_pred HHHHhhhhhhhhccccchhhhhhhhHHHHHhh--hcCCchHHHHHHHHhHHHHhhhChHh--HHHHHHHHHHHhcC-Ccc
Q psy14014 406 LAIIEYMPLLAGQLGVEFFDEKLNALSIVELA--EDSKWRVRLAIIEYMPLLAGQLGVEF--FDEKLNALCMTWLV-DHV 480 (615)
Q Consensus 406 ~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~--~~~~~~vr~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l~-d~~ 480 (615)
..+. .+.+.. ..-....|..+.+.+..+........ ..+.++..+.+.+. .++
T Consensus 80 ----~i~~------------------~l~~~~~~q~~~q~~R~~~~~ll~~l~~~~~~~l~~~~~~fv~~~i~~~~gEkD 137 (262)
T PF14500_consen 80 ----KILR------------------SLFQNVDVQSLPQSTRYAVYQLLDSLLENHREALQSMGDDFVYGFIQLIDGEKD 137 (262)
T ss_pred ----HHHH------------------HHHHhCChhhhhHHHHHHHHHHHHHHHHHhHHHHHhchhHHHHHHHHHhccCCC
Confidence 0011 111111 12233467778887777776543221 12334444455443 345
Q ss_pred hHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhh--------cCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHh
Q psy14014 481 YAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMS--------RDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLN 552 (615)
Q Consensus 481 ~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~--------~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~ 552 (615)
+..=.-+...+..+...+......+.+...+.-.+ +|+..-.|.....++.... ...+.|.+..+|.+..
T Consensus 138 PRnLl~~F~l~~~i~~~~~~~~~~e~lFd~~~cYFPI~F~pp~~dp~~IT~edLk~~L~~cl--~s~~~fa~~~~p~Lle 215 (262)
T PF14500_consen 138 PRNLLLSFKLLKVILQEFDISEFAEDLFDVFSCYFPITFRPPPNDPYGITREDLKRALRNCL--SSTPLFAPFAFPLLLE 215 (262)
T ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHHHHhhheeeeeeeCCCCCCCCCCHHHHHHHHHHHh--cCcHhhHHHHHHHHHH
Confidence 55555667777777776653323333333333211 3444445666666665543 2335678899999998
Q ss_pred hCCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHHHHhhh
Q psy14014 553 MAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKL 592 (615)
Q Consensus 553 ~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~l 592 (615)
-+....+.++..+.++|...++.++.....+...++...+
T Consensus 216 KL~s~~~~~K~D~L~tL~~c~~~y~~~~~~~~~~~iw~~l 255 (262)
T PF14500_consen 216 KLDSTSPSVKLDSLQTLKACIENYGADSLSPHWSTIWNAL 255 (262)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 8888899999999999999999999877777777777665
No 143
>KOG1525|consensus
Probab=97.40 E-value=0.084 Score=59.63 Aligned_cols=315 Identities=19% Similarity=0.185 Sum_probs=166.5
Q ss_pred HHHHHhccccCCCCCcchhhhchHHHhh-----hhcCchhHHHHHHHHHHHHHHhhcCh------hHHhhhHHHHHHH--
Q psy14014 70 ALAEQLGTFTPNVGGPEYVHCLLPPLES-----LATVEETVVRDKAVESLRLISAQHSP------HDLEAHFVPLVQR-- 136 (615)
Q Consensus 70 ~a~~~l~~l~~~~~~~~~~~~l~~~l~~-----l~~~~~~~vr~~a~~~l~~l~~~~~~------~~~~~~~l~~l~~-- 136 (615)
.+..+|..+-+ ++.-...+.|+... ++.+.+..||...+.++..+.....+ ..+...+.=++..
T Consensus 28 ~l~~~l~~~~q---d~~~~~~~~pl~~~l~~~~~L~h~d~dvrllvacCvseilRi~aPeaPy~~~~lkdIf~~~~~q~~ 104 (1266)
T KOG1525|consen 28 KLANCLASLDQ---DNLDLASLLPLADHLIKDFLLKHKDKDVRLLVACCVSEILRIYAPEAPYTDEQLKDIFQLILSQFS 104 (1266)
T ss_pred HHHHHHhhccc---CchhHHHHHHHHHHHhhHHHhcCCCcChhHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHh
Confidence 55566665544 22233445555443 45667889999888888887776654 2222222222222
Q ss_pred -hhc--CCCcchhhhHHhh-----hhhhccCC-ChhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhh
Q psy14014 137 -LAS--GDWFTSRTSACGL-----FSVCYPRV-TAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDI 207 (615)
Q Consensus 137 -l~~--~~~~~~r~~a~~~-----l~~~~~~~-~~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~l 207 (615)
+.. ++++..+..-... +..++... +++...+++..|..+..++-+.-=......++.+.... +.....+
T Consensus 105 gL~d~~sp~f~r~~~lletl~~~k~~l~~~l~d~~e~~~~~f~~f~d~~~~~~~~~v~~~~~i~~~li~e~--d~v~~e~ 182 (1266)
T KOG1525|consen 105 GLGDVESPYFKRYFYLLETLAKVKFCLLMLLEDCQELVHELFRTFFDLARKGHPKKVFNMLDIAIMLITEE--DTVQSEL 182 (1266)
T ss_pred hccCCCCcchhhHHHHHHHHHHhHHHheeeccchHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhh--ccchHHH
Confidence 222 2223222111111 22222222 34556677777777775543322222333333333221 1223334
Q ss_pred HHHH-HHhh---ccCchhHHHHHHHHHHHHHhhcChh-----------------------------------hHHHhHHH
Q psy14014 208 IPMF-VNLA---QDEQDSVRLLAVEACVSIASLLSQS-----------------------------------DVEQLVMP 248 (615)
Q Consensus 208 l~~l-~~~~---~d~~~~vr~~a~~~l~~l~~~~~~~-----------------------------------~~~~~l~~ 248 (615)
+.++ ..++ .|....-+..|...+..++..+... .....++|
T Consensus 183 L~~ll~~lv~~~~~~~~~a~~la~~li~~~a~~~~~~i~~f~~~~~~~~~s~~~~~~~~~he~i~~L~~~~p~ll~~vip 262 (1266)
T KOG1525|consen 183 LDVLLENLVKPGRDTIKEADKLASDLIERCADNLEDTIANFLNSCLTEYKSRQSSLKIKYHELILELWRIAPQLLLAVIP 262 (1266)
T ss_pred HHHHHHHhccCCCCccHHHHHHHHHHHHHhhhhhchhHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhHHHHHHHHH
Confidence 4433 2333 2444455555555555554443210 01223567
Q ss_pred HHHHhcCCCChHHHHHHHHHHHHHHHHhCccch--hhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHH
Q psy14014 249 TLRQCSGDTSWRVRYMVADKFTDLQKAVGPEIT--KTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMT 326 (615)
Q Consensus 249 ~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~--~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~ 326 (615)
.|..-+...+..+|..+...+|.+....+.... .+.+...++..+.|...+||..+++....++.+-+..... .
T Consensus 263 ~l~~eL~se~~~~Rl~a~~lvg~~~~~~~~~l~~~~~~~~~~fl~r~~D~~~~vR~~~v~~~~~~l~~~~~~~~~----~ 338 (1266)
T KOG1525|consen 263 QLEFELLSEQEEVRLKAVKLVGRMFSDKDSQLSETYDDLWSAFLGRFNDISVEVRMECVESIKQCLLNNPSIAKA----S 338 (1266)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHhcchhhhcccchHHHHHHHHHhccCChhhhhhHHHHhHHHHhcCchhhhH----H
Confidence 777767777888999999999987654333222 4577888889999999999999999999888763322110 1
Q ss_pred hhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhh
Q psy14014 327 YILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNE 395 (615)
Q Consensus 327 ~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~ 395 (615)
...-.+.....|++.++|..+ .+......--.-.+.+.++..+-+.+.|..+.||..|++.|..+.+
T Consensus 339 ~~~~~l~~~~~D~~~rir~~v--~i~~~~v~~~~l~~~~~ll~~~~eR~rDKk~~VR~~Am~~LaqlYk 405 (1266)
T KOG1525|consen 339 TILLALRERDLDEDVRVRTQV--VIVACDVMKFKLVYIPLLLKLVAERLRDKKIKVRKQAMNGLAQLYK 405 (1266)
T ss_pred HHHHHHHhhcCChhhhheeeE--EEEEeehhHhhhhhhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 122233333444444444322 1111100000011122256666777889999999999999988866
No 144
>KOG1967|consensus
Probab=97.38 E-value=0.0054 Score=64.52 Aligned_cols=148 Identities=13% Similarity=0.136 Sum_probs=116.8
Q ss_pred hhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccch---hhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhcc
Q psy14014 240 SDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEIT---KTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLD 316 (615)
Q Consensus 240 ~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~---~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~ 316 (615)
+.+...++|.+.+........+|......|..+....+.+.. .+.++|.+++.+.=++..||..+...+..+....+
T Consensus 862 QRfF~~ivP~l~~~~~t~~~~~K~~yl~~LshVl~~vP~~vllp~~~~LlPLLLq~Ls~~D~~v~vstl~~i~~~l~~~~ 941 (1030)
T KOG1967|consen 862 QRFFCDIVPILVSKFETAPGSQKHNYLEALSHVLTNVPKQVLLPQFPMLLPLLLQALSMPDVIVRVSTLRTIPMLLTESE 941 (1030)
T ss_pred HHHHHhhHHHHHHHhccCCccchhHHHHHHHHHHhcCCHHhhccchhhHHHHHHHhcCCCccchhhhHhhhhhHHHHhcc
Confidence 345567899999888755666788888888888777766543 35799999999999999999999999988776544
Q ss_pred ccchhHHHHHhhHHHHHHhhCCCC---HHHHHHHHHHHHhhchhhcch---hhhhhhHHHHHHhhcCCChhHHHHHHHh
Q psy14014 317 AYNQENIIMTYILPYVKDLVADPN---QHVKSALASVIMGLSPILGKH---NTVDHLLPLFLSQLKDECPEVRLNIISN 389 (615)
Q Consensus 317 ~~~~~~~~~~~l~p~l~~~~~d~~---~~vR~~~~~~l~~l~~~~g~~---~~~~~l~p~l~~~l~d~~~~vr~~a~~~ 389 (615)
.-. ..+...++|++..+-.|.+ ..||..++.+++.+.+..... .+.+.++..+.+.|.|+-.-||..|+++
T Consensus 942 tL~--t~~~~Tlvp~lLsls~~~~n~~~~VR~~ALqcL~aL~~~~P~~~l~~fr~~Vl~al~k~LdDkKRlVR~eAv~t 1018 (1030)
T KOG1967|consen 942 TLQ--TEHLSTLVPYLLSLSSDNDNNMMVVREDALQCLNALTRRLPTKSLLSFRPLVLRALIKILDDKKRLVRKEAVDT 1018 (1030)
T ss_pred ccc--hHHHhHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHhccCCCcccccccHHHHHHhhhccCcHHHHHHHHHHHH
Confidence 322 2467889999998887776 679999999999999865542 3466788899999999878899988875
No 145
>KOG1949|consensus
Probab=97.35 E-value=0.011 Score=60.27 Aligned_cols=145 Identities=20% Similarity=0.225 Sum_probs=108.8
Q ss_pred HHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhh----HHHH----HHHHHHHhCCCChHHHHHHHHhHHHHHH----H
Q psy14014 130 FVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGV----KAEL----RSHFRNLCQDDTPMVRRAAAGKLGELAK----V 197 (615)
Q Consensus 130 ~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~----~~~l----~~~l~~l~~d~~~~vR~~a~~~l~~l~~----~ 197 (615)
.-|.+.+-.+..+..+|..|+.++-.+++..+++. ...+ ...+..++.|+-+.||..+...+..+.. .
T Consensus 175 ~~p~l~R~L~a~Ns~VrsnAa~lf~~~fP~~dpd~~~e~mD~i~~kQf~~l~~LL~d~~p~VRS~a~~gv~k~~s~fWe~ 254 (1005)
T KOG1949|consen 175 YKPILWRGLKARNSEVRSNAALLFVEAFPIRDPDLHAEEMDSIIQKQFEELYSLLEDPYPMVRSTAILGVCKITSKFWEM 254 (1005)
T ss_pred HhHHHHHhhccCchhhhhhHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 45777777788889999999999988888876543 2222 2356788999999999998876655443 3
Q ss_pred hchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Q psy14014 198 VEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQK 274 (615)
Q Consensus 198 ~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~ 274 (615)
+++.....-+--++-.+..|...+||.+..+.+..+.-.-..-...++++|.+.-.+.|.+.+||-++.+.+..+-.
T Consensus 255 iP~~i~~~ll~kI~d~~a~dt~s~VR~svf~gl~~~l~np~sh~~le~~Lpal~~~l~D~se~VRvA~vd~ll~ik~ 331 (1005)
T KOG1949|consen 255 IPPTILIDLLKKITDELAFDTSSDVRCSVFKGLPMILDNPLSHPLLEQLLPALRYSLHDNSEKVRVAFVDMLLKIKA 331 (1005)
T ss_pred cCHHHHHHHHHHHHHHhhhccchheehhHhcCcHHHHcCccchhHHHHHHHhcchhhhccchhHHHHHHHHHHHHHh
Confidence 34433333333344556667888999999999999887766667778899988889999999999999998877643
No 146
>COG5116 RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]
Probab=97.34 E-value=0.0011 Score=65.56 Aligned_cols=147 Identities=16% Similarity=0.124 Sum_probs=102.2
Q ss_pred HHHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHh-cCCcchHHHHHHHHHHHHHHHHhChHHhhhchhH
Q psy14014 431 LSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTW-LVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIP 509 (615)
Q Consensus 431 ~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~-l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~ 509 (615)
..|.+++.|.+...|...+-+++.-.-..|.. .++..++.. .+|.+..||.+|+.++|-++-. + ...++
T Consensus 519 d~I~ell~d~ds~lRy~G~fs~alAy~GTgn~----~vv~~lLh~avsD~nDDVrRAAViAlGfvc~~--D----~~~lv 588 (926)
T COG5116 519 DYINELLYDKDSILRYNGVFSLALAYVGTGNL----GVVSTLLHYAVSDGNDDVRRAAVIALGFVCCD--D----RDLLV 588 (926)
T ss_pred HHHHHHhcCchHHhhhccHHHHHHHHhcCCcc----hhHhhhheeecccCchHHHHHHHHheeeeEec--C----cchhh
Confidence 45667788888888887766655443333432 234444444 7899999999999998877632 1 23555
Q ss_pred HHHhh-hcCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHHH
Q psy14014 510 KVVAM-SRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPA 588 (615)
Q Consensus 510 ~l~~~-~~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~ 588 (615)
...++ ..+.|+.+|...+.++|..+...|.. .....|..++.|++.-||+.|+-+++.|..++.+ ...+.+..+
T Consensus 589 ~tvelLs~shN~hVR~g~AvaLGiacag~G~~----~a~diL~~L~~D~~dfVRQ~AmIa~~mIl~Q~n~-~Lnp~v~~I 663 (926)
T COG5116 589 GTVELLSESHNFHVRAGVAVALGIACAGTGDK----VATDILEALMYDTNDFVRQSAMIAVGMILMQCNP-ELNPNVKRI 663 (926)
T ss_pred HHHHHhhhccchhhhhhhHHHhhhhhcCCccH----HHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcCc-ccChhHHHH
Confidence 55554 45669999999999999987655543 3567788888999999999999999999866543 333444444
Q ss_pred Hhhh
Q psy14014 589 LDKL 592 (615)
Q Consensus 589 l~~l 592 (615)
.+++
T Consensus 664 ~k~f 667 (926)
T COG5116 664 IKKF 667 (926)
T ss_pred HHHH
Confidence 4443
No 147
>KOG0414|consensus
Probab=97.33 E-value=0.39 Score=52.81 Aligned_cols=161 Identities=17% Similarity=0.197 Sum_probs=113.8
Q ss_pred HHHHHHhhchh---hcchhhhhhhHHHHHHhhcC----CChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhcc
Q psy14014 347 LASVIMGLSPI---LGKHNTVDHLLPLFLSQLKD----ECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQL 419 (615)
Q Consensus 347 ~~~~l~~l~~~---~g~~~~~~~l~p~l~~~l~d----~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~ 419 (615)
.+..+..+++- +|+......+.|.+.+.++. .+++.+.+|--+|+.++-.
T Consensus 897 ~~d~i~~icE~eLl~gek~lLg~f~piv~e~c~n~~~~sdp~Lq~AAtLaL~klM~i----------------------- 953 (1251)
T KOG0414|consen 897 LADLISGICEKELLYGEKSLLGRFAPIVVEGCRNPGLFSDPELQAAATLALGKLMCI----------------------- 953 (1251)
T ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHhcCCCcCCCHHHHHHHHHHHHHHhhh-----------------------
Confidence 44555555542 56566677788999888854 3678888888777765321
Q ss_pred ccchhhhhhhhHHHHHhhh-cCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHh
Q psy14014 420 GVEFFDEKLNALSIVELAE-DSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQF 498 (615)
Q Consensus 420 ~~~~~~~~l~~~~i~~~~~-~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~ 498 (615)
...|..+.+ |.+...++ .+++++|.-++-+++.++-.++. +.+..-+.+...+.|++..||++|+..+..+.-+
T Consensus 954 Sa~fces~l--~llftimeksp~p~IRsN~VvalgDlav~fpn--lie~~T~~Ly~rL~D~~~~vRkta~lvlshLILn- 1028 (1251)
T KOG0414|consen 954 SAEFCESHL--PLLFTIMEKSPSPRIRSNLVVALGDLAVRFPN--LIEPWTEHLYRRLRDESPSVRKTALLVLSHLILN- 1028 (1251)
T ss_pred hHHHHHHHH--HHHHHHHhcCCCceeeecchheccchhhhccc--ccchhhHHHHHHhcCccHHHHHHHHHHHHHHHHh-
Confidence 112222333 66777665 78999999999999999876654 2344667788889999999999999998887643
Q ss_pred ChHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhh
Q psy14014 499 GSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEA 536 (615)
Q Consensus 499 ~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~ 536 (615)
+. ...+-.++.+..++.|++..+|..|=..+.++...
T Consensus 1029 dm-iKVKGql~eMA~cl~D~~~~IsdlAk~FF~Els~k 1065 (1251)
T KOG0414|consen 1029 DM-IKVKGQLSEMALCLEDPNAEISDLAKSFFKELSSK 1065 (1251)
T ss_pred hh-hHhcccHHHHHHHhcCCcHHHHHHHHHHHHHhhhc
Confidence 11 11234667777788999999998888777777654
No 148
>PF01347 Vitellogenin_N: Lipoprotein amino terminal region; InterPro: IPR001747 This entry represents a conserved region found in several lipid transport proteins, including vitellogenin, microsomal triglyceride transfer protein and apolipoprotein B-100 []. Vitellinogen precursors provide the major egg yolk proteins that are a source of nutrients during early development of oviparous vertebrates and invertebrates. Vitellinogen precursors are multi-domain apolipoproteins that are cleaved into distinct yolk proteins. Different vitellinogen precursors exist, which are composed of variable combinations of yolk protein components; however, the cleavage sites are conserved. In vertebrates, a complete vitellinogen is composed of an N-terminal signal peptide for export, followed by four regions that can be cleaved into yolk proteins: lipovitellin-1, phosvitin, lipovitellin-2, and a von Willebrand factor type D domain (YGP40) [, ]. Microsomal triglyceride transfer protein (MTTP) is an endoplasmic reticulum lipid transfer protein involved in the biosynthesis and lipid loading of apolipoprotein B. MTTP is also involved in the late stage of CD1d trafficking in the lysosomal compartment, CD1d being the MHC I-like lipid antigen presenting molecule []. Apolipoprotein B can exist in two forms: B-100 and B-48. Apoliporotein B-100 is present on several lipoproteins, including very low-density lipoproteins (VLDL), intermediate density lipoproteins (IDL) and low density lipoproteins (LDL), and can assemble VLDL particles in the liver []. Apolipoprotein B-100 has been linked to the development of atherosclerosis.; GO: 0005319 lipid transporter activity, 0006869 lipid transport; PDB: 1LSH_A.
Probab=97.28 E-value=0.053 Score=58.75 Aligned_cols=153 Identities=16% Similarity=0.166 Sum_probs=97.5
Q ss_pred CCchHHHHHHHHhHHHHhhhChH----------------hHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHh
Q psy14014 440 SKWRVRLAIIEYMPLLAGQLGVE----------------FFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWA 503 (615)
Q Consensus 440 ~~~~vr~~~~~~l~~l~~~~~~~----------------~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~ 503 (615)
.+..+|.+++-+++.+...+-.. .+.+.+...+.......+...+..++.+||++..
T Consensus 447 ~~~~l~~ta~L~~~~lv~~~c~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~LkaLgN~g~------- 519 (618)
T PF01347_consen 447 NSPYLRETALLSLGSLVHKYCVNSDSAEFCDPCSRCIIEKYVPYLEQELKEAVSRGDEEEKIVYLKALGNLGH------- 519 (618)
T ss_dssp T-HHHHHHHHHHHHHHHHHHHTT-----------SS--GGGTHHHHHHHHHHHHTT-HHHHHHHHHHHHHHT--------
T ss_pred CChhHHHHHHHHHHHHhCceeecccccccccccchhhHHHHHHHHHHHHHHHhhccCHHHHHHHHHHhhccCC-------
Confidence 34568888888888887643211 1223344444444455667788889999888742
Q ss_pred hhchhHHHHhhhcCC---CchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhh
Q psy14014 504 QSTVIPKVVAMSRDQ---NYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNV 580 (615)
Q Consensus 504 ~~~i~~~l~~~~~d~---~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~ 580 (615)
...++.+...+.+. ...+|..|+.++..++..+ ++.+.+.++|++.+ ...+++||..|...|-..-+.
T Consensus 520 -~~~i~~l~~~i~~~~~~~~~~R~~Ai~Alr~~~~~~-~~~v~~~l~~I~~n--~~e~~EvRiaA~~~lm~~~P~----- 590 (618)
T PF01347_consen 520 -PESIPVLLPYIEGKEEVPHFIRVAAIQALRRLAKHC-PEKVREILLPIFMN--TTEDPEVRIAAYLILMRCNPS----- 590 (618)
T ss_dssp -GGGHHHHHTTSTTSS-S-HHHHHHHHHTTTTGGGT--HHHHHHHHHHHHH---TTS-HHHHHHHHHHHHHT--------
T ss_pred -chhhHHHHhHhhhccccchHHHHHHHHHHHHHhhcC-cHHHHHHHHHHhcC--CCCChhHHHHHHHHHHhcCCC-----
Confidence 35778888877665 6789999999999886554 34445566666664 345678999998777664321
Q ss_pred HHhhHHHHHhhhcCCCCccHHHHHHHHHH
Q psy14014 581 IQSQVKPALDKLNGDTDVDVKYFAQEAIS 609 (615)
Q Consensus 581 ~~~~~~~~l~~l~~d~d~~v~~~a~~a~~ 609 (615)
...+..+...+..|++.+|+.+....|+
T Consensus 591 -~~~l~~i~~~l~~E~~~QV~sfv~S~Lk 618 (618)
T PF01347_consen 591 -PSVLQRIAQSLWNEPSNQVASFVYSHLK 618 (618)
T ss_dssp -HHHHHHHHHHHTT-S-HHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHhhCchHHHHHHHHHhcC
Confidence 2346666677789999999999887764
No 149
>KOG1517|consensus
Probab=97.27 E-value=0.02 Score=61.31 Aligned_cols=134 Identities=16% Similarity=0.208 Sum_probs=97.2
Q ss_pred hHHHHHHHHhHHHHhhh--ChH-hHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHhChHHhh---hchhHHHHhhh
Q psy14014 443 RVRLAIIEYMPLLAGQL--GVE-FFDEKLNALCMTWLVDH-VYAIREAATLNLKKLVEQFGSEWAQ---STVIPKVVAMS 515 (615)
Q Consensus 443 ~vr~~~~~~l~~l~~~~--~~~-~~~~~l~~~l~~~l~d~-~~~vR~~a~~~l~~l~~~~~~~~~~---~~i~~~l~~~~ 515 (615)
.-|..++-.|..|..++ |.+ -+...++..++..++|+ .+-+|...+-+||.+-..+....+. ...-..|...+
T Consensus 572 EqrtmaAFVLAviv~nf~lGQ~acl~~~li~iCle~lnd~~~pLLrQW~~icLG~LW~d~~~Arw~G~r~~AhekL~~~L 651 (1387)
T KOG1517|consen 572 EQRTMAAFVLAVIVRNFKLGQKACLNGNLIGICLEHLNDDPEPLLRQWLCICLGRLWEDYDEARWSGRRDNAHEKLILLL 651 (1387)
T ss_pred HHHHHHHHHHHHHHcccchhHHHhccccHHHHHHHHhcCCccHHHHHHHHHHHHHHhhhcchhhhccccccHHHHHHHHh
Confidence 56777777888888766 332 24467888999999995 7889999999999998876543221 22445677788
Q ss_pred cCCCchHHHHHHHHHHHHHhhh----Chhh--H------------HHhhH----HHHHhhCCCCCchHHHHHHHHHHHHh
Q psy14014 516 RDQNYLHRMTCLFCINVLAEAC----GPTV--T------------ANFLL----PTVLNMAGDNVANVRFNVAKTLQKIG 573 (615)
Q Consensus 516 ~d~~~~~R~~a~~~l~~l~~~~----~~~~--~------------~~~i~----~~l~~~~~D~~~~vr~~a~~~l~~l~ 573 (615)
.|+.+.||.+|+.|||.+.... ++.. . .+... ..+..+++|..+-||..+.-+|..+.
T Consensus 652 sD~vpEVRaAAVFALgtfl~~~~d~fde~~~~~~~~~~l~~~~~~~E~~i~~~~~~ll~~vsdgsplvr~ev~v~ls~~~ 731 (1387)
T KOG1517|consen 652 SDPVPEVRAAAVFALGTFLSNGSDNFDEQTLVVEEEIDLDDERTSIEDLIIKGLMSLLALVSDGSPLVRTEVVVALSHFV 731 (1387)
T ss_pred cCccHHHHHHHHHHHHHHhcccccccchhhhhhhhhhcchhhhhhHHHHHHhhHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 9999999999999999998652 1110 0 11122 25666789999999999999998887
Q ss_pred Hhh
Q psy14014 574 PIL 576 (615)
Q Consensus 574 ~~~ 576 (615)
-.+
T Consensus 732 ~g~ 734 (1387)
T KOG1517|consen 732 VGY 734 (1387)
T ss_pred Hhh
Confidence 544
No 150
>PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II
Probab=97.22 E-value=0.19 Score=47.06 Aligned_cols=235 Identities=12% Similarity=0.161 Sum_probs=134.4
Q ss_pred HHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchh--hcchhhhhh
Q psy14014 289 FQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPI--LGKHNTVDH 366 (615)
Q Consensus 289 l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~--~g~~~~~~~ 366 (615)
+-..+.++++.+|..|+..|..++..+++......-.+.++..+...+.| +..-..++.++..+... ++.+. ...
T Consensus 4 Lg~~Ltsed~~~R~ka~~~Ls~vL~~lp~~~L~~~ev~~L~~F~~~rl~D--~~~~~~~l~gl~~L~~~~~~~~~~-~~~ 80 (262)
T PF14500_consen 4 LGEYLTSEDPIIRAKALELLSEVLERLPPDFLSRQEVQVLLDFFCSRLDD--HACVQPALKGLLALVKMKNFSPES-AVK 80 (262)
T ss_pred hhhhhCCCCHHHHHHHHHHHHHHHHhCCHhhccHHHHHHHHHHHHHHhcc--HhhHHHHHHHHHHHHhCcCCChhh-HHH
Confidence 34567788889999999999999888876543333455666666666643 33333335666555532 11111 223
Q ss_pred hHHHHHHhhc--CCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhh-hcCCch
Q psy14014 367 LLPLFLSQLK--DECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELA-EDSKWR 443 (615)
Q Consensus 367 l~p~l~~~l~--d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~-~~~~~~ 443 (615)
++..+.+... .-...+|..+.+.+..+.+..... + ..+|.+|. ..+.+.. ..+++|
T Consensus 81 i~~~l~~~~~~q~~~q~~R~~~~~ll~~l~~~~~~~-----------l----~~~~~~fv------~~~i~~~~gEkDPR 139 (262)
T PF14500_consen 81 ILRSLFQNVDVQSLPQSTRYAVYQLLDSLLENHREA-----------L----QSMGDDFV------YGFIQLIDGEKDPR 139 (262)
T ss_pred HHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHhHHH-----------H----HhchhHHH------HHHHHHhccCCCHH
Confidence 3333333222 123467888877777665443211 1 12222222 1222333 235667
Q ss_pred HHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhc--------CCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhh
Q psy14014 444 VRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWL--------VDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMS 515 (615)
Q Consensus 444 vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l--------~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~ 515 (615)
--..+.+.+..+...+....+.+.++..+.-.. +|+..--|+.-...+..... +...+.+..+|.+++-+
T Consensus 140 nLl~~F~l~~~i~~~~~~~~~~e~lFd~~~cYFPI~F~pp~~dp~~IT~edLk~~L~~cl~--s~~~fa~~~~p~LleKL 217 (262)
T PF14500_consen 140 NLLLSFKLLKVILQEFDISEFAEDLFDVFSCYFPITFRPPPNDPYGITREDLKRALRNCLS--STPLFAPFAFPLLLEKL 217 (262)
T ss_pred HHHHHHHHHHHHHHhcccchhHHHHHHHhhheeeeeeeCCCCCCCCCCHHHHHHHHHHHhc--CcHhhHHHHHHHHHHHH
Confidence 667777778878777765545555555444321 24322222222222222211 22335567899999988
Q ss_pred cCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHH
Q psy14014 516 RDQNYLHRMTCLFCINVLAEACGPTVTANFLLPT 549 (615)
Q Consensus 516 ~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~ 549 (615)
.+..+.++..++.++...++.+|.....+++.+.
T Consensus 218 ~s~~~~~K~D~L~tL~~c~~~y~~~~~~~~~~~i 251 (262)
T PF14500_consen 218 DSTSPSVKLDSLQTLKACIENYGADSLSPHWSTI 251 (262)
T ss_pred cCCCcHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 8999999999999999999999887666555443
No 151
>smart00638 LPD_N Lipoprotein N-terminal Domain.
Probab=97.13 E-value=0.084 Score=56.52 Aligned_cols=151 Identities=17% Similarity=0.140 Sum_probs=97.1
Q ss_pred CchHHHHHHHHhHHHHhhhCh------HhHHHHHHHHHHHh----cCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHH
Q psy14014 441 KWRVRLAIIEYMPLLAGQLGV------EFFDEKLNALCMTW----LVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPK 510 (615)
Q Consensus 441 ~~~vr~~~~~~l~~l~~~~~~------~~~~~~l~~~l~~~----l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~ 510 (615)
...+|..++-+++.+...... ....+.+.+.+.+. ..+.+...+..++++||++.. ...++.
T Consensus 410 ~~~l~~sa~l~~~~lv~~~c~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~LkaLGN~g~--------~~~i~~ 481 (574)
T smart00638 410 QPYLRESALLAYGSLVRRYCVNTPSCPDFVLEELLKYLHELLQQAVSKGDEEEIQLYLKALGNAGH--------PSSIKV 481 (574)
T ss_pred cHHHHHHHHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHHHHHHHHhcCCchheeeHHHhhhccCC--------hhHHHH
Confidence 445788888888888764321 11223455555443 344566667788888887642 123344
Q ss_pred HHhhhc---CCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHH
Q psy14014 511 VVAMSR---DQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKP 587 (615)
Q Consensus 511 l~~~~~---d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~ 587 (615)
+...+. ..+..+|..|+++|..+++..+ ....+.+++++.+ .+.+++||..|...|-...+. ...+..
T Consensus 482 l~~~l~~~~~~~~~iR~~Av~Alr~~a~~~p-~~v~~~l~~i~~n--~~e~~EvRiaA~~~lm~t~P~------~~~l~~ 552 (574)
T smart00638 482 LEPYLEGAEPLSTFIRLAAILALRNLAKRDP-RKVQEVLLPIYLN--RAEPPEVRMAAVLVLMETKPS------VALLQR 552 (574)
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHHHHhCc-hHHHHHHHHHHcC--CCCChHHHHHHHHHHHhcCCC------HHHHHH
Confidence 443332 3466899999999999886554 3344555565543 457788999998888775332 235666
Q ss_pred HHhhhcCCCCccHHHHHHHHH
Q psy14014 588 ALDKLNGDTDVDVKYFAQEAI 608 (615)
Q Consensus 588 ~l~~l~~d~d~~v~~~a~~a~ 608 (615)
+...+..|++.+|+.+....+
T Consensus 553 ia~~l~~E~~~QV~sfv~S~l 573 (574)
T smart00638 553 IAELLNKEPNLQVASFVYSHI 573 (574)
T ss_pred HHHHHhhcCcHHHHHHhHHhh
Confidence 777778899999999887655
No 152
>PF12530 DUF3730: Protein of unknown function (DUF3730) ; InterPro: IPR022542 This domain is found in eukaryotes, and is typically between 220 and 262 amino acids in length.
Probab=97.12 E-value=0.12 Score=47.82 Aligned_cols=56 Identities=16% Similarity=0.191 Sum_probs=47.2
Q ss_pred CCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhh-ccCchhHHHHHHHHHHHHHh
Q psy14014 178 DDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLA-QDEQDSVRLLAVEACVSIAS 235 (615)
Q Consensus 178 d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~-~d~~~~vr~~a~~~l~~l~~ 235 (615)
+..++.....+.++..+++..+. ...++++.+...+ ++.++.++..+++.+..+++
T Consensus 95 ~~~~~~~i~~a~s~~~ic~~~p~--~g~~ll~~ls~~L~~~~~~~~~alale~l~~Lc~ 151 (234)
T PF12530_consen 95 DEFWECLISIAASIRDICCSRPD--HGVDLLPLLSGCLNQSCDEVAQALALEALAPLCE 151 (234)
T ss_pred cchHHHHHHHHHHHHHHHHhChh--hHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence 45677777777888899887766 6788999999999 78889999999999999884
No 153
>PF08506 Cse1: Cse1; InterPro: IPR013713 The exchange of macromolecules between the nucleus and cytoplasm takes place through nuclear pore complexes within the nuclear membrane. Active transport of large molecules through these pore complexes require carrier proteins, called karyopherins (importins and exportins), which shuttle between the two compartments. This domain is found in exportin Cse1 (also known as importin-alpha re-exporter). Exportin Cse1 mediates nuclear transport of importin-alpha back into the cytosol, where importin-alpha functions as a transporter of proteins carrying nuclear localisation signals (NLS) from the cytoplasm into the nucleus [, , ]. This domain contains HEAT repeats. More information about these proteins can be found at Protein of the Month: Importins [].; GO: 0006886 intracellular protein transport; PDB: 1Z3H_B 1WA5_C.
Probab=97.05 E-value=0.088 Score=52.01 Aligned_cols=127 Identities=18% Similarity=0.191 Sum_probs=78.9
Q ss_pred chHHHHHHHHHHHHHHHHhChHHhh--hchhHHHHh-hhc--CCCchHHHHHHHHHHHHHhhhC---------------h
Q psy14014 480 VYAIREAATLNLKKLVEQFGSEWAQ--STVIPKVVA-MSR--DQNYLHRMTCLFCINVLAEACG---------------P 539 (615)
Q Consensus 480 ~~~vR~~a~~~l~~l~~~~~~~~~~--~~i~~~l~~-~~~--d~~~~~R~~a~~~l~~l~~~~~---------------~ 539 (615)
...-|.+|...+..+++.++..... ..++..+++ ... ..+|+.+.+|+..++.++.... .
T Consensus 224 ~~TrR~AA~dfl~~L~~~~~~~v~~i~~~~i~~~l~~y~~~~~~~w~~KD~Al~Li~ala~k~~t~~~Gvt~~~~~v~v~ 303 (370)
T PF08506_consen 224 SDTRRRAACDFLRSLCKKFEKQVTSILMQYIQQLLQQYASNPSNNWRSKDGALYLIGALASKGSTTKSGVTQTNELVDVV 303 (370)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTT-HHHHHHHHHHHHHHHBSS--BTTB-S-B-TTS-HH
T ss_pred cCCcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhCCcccHHHHHHHHHHHHHHHhhhccccCCcccccccccHH
Confidence 4567888888888888776543211 112222222 112 3478888889999998885431 1
Q ss_pred hhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHHHHhhhcCCCCccHHHHHHHHH
Q psy14014 540 TVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKLNGDTDVDVKYFAQEAI 608 (615)
Q Consensus 540 ~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~l~~d~d~~v~~~a~~a~ 608 (615)
+++.++++|.|. --.+..|-+|-.|++.+..+-..++.+.... +.|.+...+.+++..|+.+|..|+
T Consensus 304 ~Ff~~~v~peL~-~~~~~~piLka~aik~~~~Fr~~l~~~~l~~-~~~~l~~~L~~~~~vv~tyAA~~i 370 (370)
T PF08506_consen 304 DFFSQHVLPELQ-PDVNSHPILKADAIKFLYTFRNQLPKEQLLQ-IFPLLVNHLQSSSYVVHTYAAIAI 370 (370)
T ss_dssp HHHHHHTCHHHH--SS-S-HHHHHHHHHHHHHHGGGS-HHHHHH-HHHHHHHHTTSS-HHHHHHHHHHH
T ss_pred HHHHHHhHHHhc-ccCCCCcchHHHHHHHHHHHHhhCCHHHHHH-HHHHHHHHhCCCCcchhhhhhhhC
Confidence 245677888887 4445667788899999988888777655544 455555555788889999988764
No 154
>COG5218 YCG1 Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell division and chromosome partitioning]
Probab=97.05 E-value=0.44 Score=48.21 Aligned_cols=96 Identities=18% Similarity=0.206 Sum_probs=68.4
Q ss_pred HHHHHHHhcCccHHHHHHHHhcHHHHHHHhCc--chhhccchhhhhhhcCCcH-HHHHHHHHHhccccCCCCCcchhhhc
Q psy14014 15 IAVLIDELKNEDVQLRLNSIKKLSTIALALGQ--ERTRGELIPFLTETIYDED-EVLLALAEQLGTFTPNVGGPEYVHCL 91 (615)
Q Consensus 15 i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~--~~~~~~ll~~l~~~~~~~~-~vr~~a~~~l~~l~~~~~~~~~~~~l 91 (615)
+..++-...++|.++|...++.|..++.-+++ +...+-|+..+..-+-|-+ .||+.|..+|.++-+.-+.++ ..+
T Consensus 93 ~~h~lRg~eskdk~VR~r~lqila~~~d~v~eIDe~l~N~L~ekl~~R~~DRE~~VR~eAv~~L~~~Qe~~~nee--n~~ 170 (885)
T COG5218 93 FYHLLRGTESKDKKVRKRSLQILALLSDVVREIDEVLANGLLEKLSERLFDREKAVRREAVKVLCYYQEMELNEE--NRI 170 (885)
T ss_pred HHHHHhcccCcchhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhccCChH--HHH
Confidence 66777788999999999999999999887776 4455666666655444544 599999999988765433332 222
Q ss_pred hHHHhh-hhcCchhHHHHHHHH
Q psy14014 92 LPPLES-LATVEETVVRDKAVE 112 (615)
Q Consensus 92 ~~~l~~-l~~~~~~~vr~~a~~ 112 (615)
..+|.. +..|+..+||..|+-
T Consensus 171 ~n~l~~~vqnDPS~EVRr~all 192 (885)
T COG5218 171 VNLLKDIVQNDPSDEVRRLALL 192 (885)
T ss_pred HHHHHHHHhcCcHHHHHHHHHH
Confidence 233333 447889999999874
No 155
>KOG1993|consensus
Probab=97.03 E-value=0.58 Score=49.23 Aligned_cols=234 Identities=17% Similarity=0.187 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHHHHhCccchhhhHHHHHHHhh------------cCCcHHHHHHHHHHH-HHHHhhcccc-chhHHHHH
Q psy14014 261 VRYMVADKFTDLQKAVGPEITKTDLVQAFQMLL------------KDSEAEVRAAAANKV-RDFCQNLDAY-NQENIIMT 326 (615)
Q Consensus 261 vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l------------~d~~~~vr~~a~~~l-~~~~~~~~~~-~~~~~~~~ 326 (615)
+|-++-..+-.+...++ +-+.|.+.+.+ +|-+.-+++.|+.+- +.-+..+.+. ....++.+
T Consensus 413 lRPCaE~L~~~lF~~ys-----qllvP~~l~~i~~a~~~~~pt~~~~l~a~L~KDAiYaa~g~~a~~l~~~~dF~~Wl~~ 487 (978)
T KOG1993|consen 413 LRPCAEKLYKDLFDAYS-----QLLVPPVLDMIYSAQELQSPTVTEDLTALLLKDAIYAAFGLAAYELSNILDFDKWLQE 487 (978)
T ss_pred cchhHHHHHHHHHHHHH-----HhhhHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 55555544444444332 34555555544 233445666555543 3322222221 22346778
Q ss_pred hhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCC-ChhHHHHHHHhhhHhhhhh--chhHHH
Q psy14014 327 YILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDE-CPEVRLNIISNLDCVNEVI--GIQQWR 403 (615)
Q Consensus 327 ~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~-~~~vr~~a~~~l~~l~~~~--~~~~~~ 403 (615)
.++|-+.. ..+...-.|+-++..++.-..+--+......+-..+.++++|. +-.||..+++++...+.-. ..+.
T Consensus 488 ~llpEl~~-~~~~~RiiRRRVa~ilg~Wvsvq~~~e~k~l~Y~a~lnLL~d~~D~vV~Ltt~~tlkl~vDD~nF~~ds-- 564 (978)
T KOG1993|consen 488 ALLPELAN-DHGNSRIIRRRVAWILGQWVSVQQKLELKPLLYCAFLNLLQDQNDLVVRLTTARTLKLVVDDWNFSEDS-- 564 (978)
T ss_pred hhCHHhhh-cccchhHHHHHHHHHHhhhhheechHhHHHHHHHHHHHhcCccccceeehHHHHHHHHhhhhccCChhh--
Confidence 88887762 2223334577777777765543333334445566788899987 5678999999998776432 1111
Q ss_pred HHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhc-CCchHHHHHHHHhHHHHhhhChHh--HHHH---HHHHHHHhcC
Q psy14014 404 VRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAED-SKWRVRLAIIEYMPLLAGQLGVEF--FDEK---LNALCMTWLV 477 (615)
Q Consensus 404 ~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~-~~~~vr~~~~~~l~~l~~~~~~~~--~~~~---l~~~l~~~l~ 477 (615)
++|.+ +.+. ..+.++++. ..-..|...+..++.+....+... +... ++|.+++.-.
T Consensus 565 -------Flp~l----------enlf-~~lfkll~~~~e~Dtk~~VL~~ls~lI~r~~e~I~P~~~~ivq~lp~LWe~s~ 626 (978)
T KOG1993|consen 565 -------FLPYL----------ENLF-VLLFKLLKAVEECDTKTSVLNLLSTLIERVSEHIAPYASTIVQYLPLLWEESE 626 (978)
T ss_pred -------hhhhH----------HHHH-HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhc
Confidence 12211 1111 122233321 122355667777777766555432 2222 3343333322
Q ss_pred CcchHHHHHHHHHHHHHHHHhChHHh-hhchhHHHHhhhcCCCch
Q psy14014 478 DHVYAIREAATLNLKKLVEQFGSEWA-QSTVIPKVVAMSRDQNYL 521 (615)
Q Consensus 478 d~~~~vR~~a~~~l~~l~~~~~~~~~-~~~i~~~l~~~~~d~~~~ 521 (615)
+..-+|.+-+.++.+++..+|.... ...++-.++++..|++..
T Consensus 627 -~e~lLr~alL~~L~~lV~alg~qS~~~~~fL~pVIel~~D~~sP 670 (978)
T KOG1993|consen 627 -EEPLLRCALLATLRNLVNALGAQSFEFYPFLYPVIELSTDPSSP 670 (978)
T ss_pred -cCcHHHHHHHHHHHHHHHHhccCCccchHHHHHHHHHhcCCCCC
Confidence 4667999999999999999986422 223455566667776543
No 156
>KOG2973|consensus
Probab=97.01 E-value=0.28 Score=45.51 Aligned_cols=255 Identities=15% Similarity=0.160 Sum_probs=133.9
Q ss_pred HHHHhhCCCCHHHHHHHHHHHHhhchhhcchhh---hhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHH
Q psy14014 331 YVKDLVADPNQHVKSALASVIMGLSPILGKHNT---VDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLA 407 (615)
Q Consensus 331 ~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~---~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~ 407 (615)
-+..++.+.++.||..+...+..+... |...+ ....++.+.+++++..+ -+.|+.++..+.+ ....++.+-
T Consensus 7 elv~ll~~~sP~v~~~AV~~l~~lt~~-~~~~~~~~~~~~lk~l~qL~~~~~~--~~~a~~alVnlsq---~~~l~~~ll 80 (353)
T KOG2973|consen 7 ELVELLHSLSPPVRKAAVEHLLGLTGR-GLQSLSKYSEALLKDLTQLLKDLDP--AEPAATALVNLSQ---KEELRKKLL 80 (353)
T ss_pred HHHHHhccCChHHHHHHHHHHhhcccc-chhhhccchhhhHHHHHHHccCccc--ccHHHHHHHHHHh---hHHHHHHHH
Confidence 456678899999999999888776554 33222 33578888889888655 3344444443332 232333320
Q ss_pred HHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHh---------HHHHHHHHHHHhcCC
Q psy14014 408 IIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEF---------FDEKLNALCMTWLVD 478 (615)
Q Consensus 408 i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~---------~~~~l~~~l~~~l~d 478 (615)
-.++ ..++..+-|+.|-.-...+..+..+++.=+.-. ..+.++. ++....|
T Consensus 81 -~~~~------------------k~l~~~~~~p~~~lad~~cmlL~NLs~~~~~~~~ll~~~~~~~~~~lm~-l~~~~~d 140 (353)
T KOG2973|consen 81 -QDLL------------------KVLMDMLTDPQSPLADLICMLLSNLSRDDDEVAALLTNLTEKKDSGLMR-LARAFCD 140 (353)
T ss_pred -HHHH------------------HHHHHHhcCcccchHHHHHHHHHHhccCchHHHHHHHhcccccccchHH-HHHHHhC
Confidence 0011 244455556666665666666655543111100 0122333 3333334
Q ss_pred cchHHHHHHHHHHHHHHHHhC-----hHHhh--hc-hhHHHHhhhcCCCchHHHHHHHHHHHHHhh--------------
Q psy14014 479 HVYAIREAATLNLKKLVEQFG-----SEWAQ--ST-VIPKVVAMSRDQNYLHRMTCLFCINVLAEA-------------- 536 (615)
Q Consensus 479 ~~~~vR~~a~~~l~~l~~~~~-----~~~~~--~~-i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~-------------- 536 (615)
+... ..+-+.-++.+...++ ...+. +. ....+..+-...+...|.+.+.++.+.+-.
T Consensus 141 ~~~n-~~a~f~ylA~vf~nls~~~~gR~l~~~~k~~p~~kll~ft~~~s~vRr~GvagtlkN~cFd~~~h~~lL~e~~~l 219 (353)
T KOG2973|consen 141 KSYN-AYAEFHYLAPVFANLSQFEAGRKLLLEPKRFPDQKLLPFTSEDSQVRRGGVAGTLKNCCFDAKLHEVLLDESINL 219 (353)
T ss_pred cccc-cccchhHHHHHHHHHhhhhhhhhHhcchhhhhHhhhhcccccchhhhccchHHHHHhhhccchhHHHHhcchHHH
Confidence 4433 3333333333333332 12111 11 222344444423333344566666664321
Q ss_pred --------hChhhHHH---hhHHHHHhhC-----CCCCchHHHHHHHHHHHHhHhhhhh--hHHhhHHHHHhhh-cCCCC
Q psy14014 537 --------CGPTVTAN---FLLPTVLNMA-----GDNVANVRFNVAKTLQKIGPILETN--VIQSQVKPALDKL-NGDTD 597 (615)
Q Consensus 537 --------~~~~~~~~---~i~~~l~~~~-----~D~~~~vr~~a~~~l~~l~~~~~~~--~~~~~~~~~l~~l-~~d~d 597 (615)
.|++.+.+ .-+|.=.+++ .|+++++|.....++-.++..-... .....+-|+++.+ ...+|
T Consensus 220 Lp~iLlPlagpee~sEEdm~~LP~eLQyLp~dKeRepdpdIrk~llEai~lLcaT~~GRe~lR~kgvYpilRElhk~e~d 299 (353)
T KOG2973|consen 220 LPAILLPLAGPEELSEEDMAKLPVELQYLPEDKEREPDPDIRKMLLEALLLLCATRAGREVLRSKGVYPILRELHKWEED 299 (353)
T ss_pred HHHHHhhcCCccccCHHHHhcCCHhhhcCCccccCCCChHHHHHHHHHHHHHHhhhHhHHHHHhcCchHHHHHHhcCCCc
Confidence 12221111 1112111333 3789999999999999998654332 3356688999998 67789
Q ss_pred ccHHHHHHHHHHHHh
Q psy14014 598 VDVKYFAQEAISSIA 612 (615)
Q Consensus 598 ~~v~~~a~~a~~~~~ 612 (615)
++++..+......+.
T Consensus 300 ed~~~ace~vvq~Lv 314 (353)
T KOG2973|consen 300 EDIREACEQVVQMLV 314 (353)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999888776653
No 157
>KOG1822|consensus
Probab=96.97 E-value=1.2 Score=51.80 Aligned_cols=172 Identities=17% Similarity=0.163 Sum_probs=113.6
Q ss_pred hHHhhhhhhccCCChhhHHHHHHHHHHHhCCC-C---hHHHHHHHH--hHHHHHHH---------hchhhhHhhhHHHHH
Q psy14014 148 SACGLFSVCYPRVTAGVKAELRSHFRNLCQDD-T---PMVRRAAAG--KLGELAKV---------VEVDYLKTDIIPMFV 212 (615)
Q Consensus 148 ~a~~~l~~~~~~~~~~~~~~l~~~l~~l~~d~-~---~~vR~~a~~--~l~~l~~~---------~~~~~~~~~ll~~l~ 212 (615)
.+..+++.++++++..++..++..+....... . .-|+..+.. ++....+. ++++.....-+..+.
T Consensus 803 ta~~lfg~vfp~v~~k~~~~ile~~~esi~~sk~~r~qsV~~~a~t~~al~s~lk~l~e~~~~~~lg~e~v~~~~~~l~~ 882 (2067)
T KOG1822|consen 803 TAVSLFGSVFPHVNNKIRLSILEHFPESIKQSKSARQQSVQVNAVTWQALLSALKYLAEFKGATSLGPEEVRSSALTLIV 882 (2067)
T ss_pred HHHHHHHHhccCccHHHHHHHHHHHHHHhhhhccchhHHHHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHHHHh
Confidence 35567778888888777777777665554432 2 223333333 33222222 233334444445555
Q ss_pred HhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCC-CChHHHHHHHHHHHHHHHHhCccchhhhH---HHH
Q psy14014 213 NLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGD-TSWRVRYMVADKFTDLQKAVGPEITKTDL---VQA 288 (615)
Q Consensus 213 ~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d-~~~~vR~~~~~~l~~l~~~~~~~~~~~~l---~~~ 288 (615)
..+...++-.|.++.+++..++...+...+...+.+.+..-+.+ .++..|..-..++|.+-++.|.-...+++ +.+
T Consensus 883 ~sl~~~~p~~rc~~~ea~arLaq~v~~~~f~a~~aq~~fdklas~~d~i~R~ghslalg~lhkyvgs~~s~qhl~t~v~i 962 (2067)
T KOG1822|consen 883 NSLINPNPKLRCAAAEALARLAQVVGSAPFVASLAQNSFDKLASARDPITRTGHSLALGCLHKYVGSIGSGQHLNTSVSI 962 (2067)
T ss_pred hhhccCChHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhccCCCCchhcccHHHH
Confidence 55667888999999999999999999887777666666554444 55666777777788887776654333343 447
Q ss_pred HHHhhcCCcH-HHHHHHHHHHHHHHhhccccc
Q psy14014 289 FQMLLKDSEA-EVRAAAANKVRDFCQNLDAYN 319 (615)
Q Consensus 289 l~~~l~d~~~-~vr~~a~~~l~~~~~~~~~~~ 319 (615)
+..+.+|+++ .|+..++.++..+....++..
T Consensus 963 llal~~Ds~~p~VqtwSL~al~~i~~s~~p~~ 994 (2067)
T KOG1822|consen 963 LLALATDSTSPVVQTWSLHALALILDSSGPMF 994 (2067)
T ss_pred HHHHhhcCCCchhhhhHHHHHHHHHcCCCcee
Confidence 7778888875 999999999999888766554
No 158
>KOG2933|consensus
Probab=96.95 E-value=0.031 Score=51.68 Aligned_cols=138 Identities=13% Similarity=0.106 Sum_probs=94.9
Q ss_pred HHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHH--HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhH
Q psy14014 432 SIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFD--EKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIP 509 (615)
Q Consensus 432 ~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~--~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~ 509 (615)
.+.+.+++....|-.+++.+++.+...++..... +.++-.++.--.+.+.-||+.|-.+|..+.....+. .+++
T Consensus 133 ~vvkslKNlRS~VsraA~~t~~difs~ln~~i~~~ld~lv~~Ll~ka~~dnrFvreda~kAL~aMV~~vtp~----~~L~ 208 (334)
T KOG2933|consen 133 AVVKSLKNLRSAVSRAACMTLADIFSSLNNSIDQELDDLVTQLLHKASQDNRFVREDAEKALVAMVNHVTPQ----KLLR 208 (334)
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHhccChH----HHHH
Confidence 4556667777889999999999999988765432 222222222234557779999999999999876653 5778
Q ss_pred HHHhhhcCCCchHHHHHHHHHHHHHhhhChhhHH----HhhHHHHHhhCCCCCchHHHHHHHHHHHHh
Q psy14014 510 KVVAMSRDQNYLHRMTCLFCINVLAEACGPTVTA----NFLLPTVLNMAGDNVANVRFNVAKTLQKIG 573 (615)
Q Consensus 510 ~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~~----~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~ 573 (615)
.|+....+.++++|..++.|+......++-.... ....+.+.+-..|.-+.+|..+-..+....
T Consensus 209 ~L~~~~~~~n~r~r~~a~~~~~~~v~rl~v~~~~~~~~~dl~~a~~~~~~d~Lp~~~~~a~~~~~~~~ 276 (334)
T KOG2933|consen 209 KLIPILQHSNPRVRAKAALCFSRCVIRLGVLPVLLQGSCDLSRAAQEQGSDKLPELREAARFVRLELK 276 (334)
T ss_pred HHHHHHhhhchhhhhhhhccccccceeccccchhhHhHHHHHHHHHhhhcccccccccchhHHHHhHH
Confidence 8888889999999999999888877766522222 223355555567777777765555444443
No 159
>PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain
Probab=96.88 E-value=0.29 Score=47.32 Aligned_cols=170 Identities=14% Similarity=0.117 Sum_probs=100.8
Q ss_pred HhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhh
Q psy14014 334 DLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMP 413 (615)
Q Consensus 334 ~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~ 413 (615)
..++..++.+|..+.+++|-.+- +++ ......++.+.+.++.++..|+..|++++..+....|.+...... -+
T Consensus 34 P~v~~~~~~vR~~al~cLGl~~L-ld~-~~a~~~l~l~~~~~~~~~~~v~~~al~~l~Dll~~~g~~~~~~~~-----~~ 106 (298)
T PF12719_consen 34 PAVQSSDPAVRELALKCLGLCCL-LDK-ELAKEHLPLFLQALQKDDEEVKITALKALFDLLLTHGIDIFDSES-----DN 106 (298)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHH-hCh-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCchhccchh-----cc
Confidence 56788899999999999987653 333 233455777888887668999999999998887766654322211 00
Q ss_pred hhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHh--hhCh-HhHHHHHHHHHHHhcCCcchHHHHHHHHH
Q psy14014 414 LLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAG--QLGV-EFFDEKLNALCMTWLVDHVYAIREAATLN 490 (615)
Q Consensus 414 ~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~--~~~~-~~~~~~l~~~l~~~l~d~~~~vR~~a~~~ 490 (615)
+.......+. ..+.+.+.+.+..+|..+++.+..+.- .+.. ......++-..++--..++..+|.+-..+
T Consensus 107 ------~~~~~~~~l~-~~l~~~l~~~~~~~~~~a~EGl~KLlL~~~i~~~~~vL~~Lll~yF~p~t~~~~~LrQ~L~~F 179 (298)
T PF12719_consen 107 ------DESVDSKSLL-KILTKFLDSENPELQAIAVEGLCKLLLSGRISDPPKVLSRLLLLYFNPSTEDNQRLRQCLSVF 179 (298)
T ss_pred ------CccchHhHHH-HHHHHHHhcCCHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCcccCCcHHHHHHHHHH
Confidence 0000011111 356667777788899999999888643 2222 22222333323333344456777776666
Q ss_pred HHHHHHHhC--hHHhhhchhHHHHhhhcC
Q psy14014 491 LKKLVEQFG--SEWAQSTVIPKVVAMSRD 517 (615)
Q Consensus 491 l~~l~~~~~--~~~~~~~i~~~l~~~~~d 517 (615)
+..++..-. .....+.++|.+..+.+.
T Consensus 180 fp~y~~s~~~~Q~~l~~~f~~~l~~~~~~ 208 (298)
T PF12719_consen 180 FPVYASSSPENQERLAEAFLPTLRTLSNA 208 (298)
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHhC
Confidence 666654221 122334566777665544
No 160
>COG5234 CIN1 Beta-tubulin folding cofactor D [Posttranslational modification, protein turnover, chaperones / Cytoskeleton]
Probab=96.86 E-value=0.45 Score=49.18 Aligned_cols=67 Identities=9% Similarity=0.013 Sum_probs=44.9
Q ss_pred HhhhchhHHHHhhhcCC----CchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHh
Q psy14014 502 WAQSTVIPKVVAMSRDQ----NYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIG 573 (615)
Q Consensus 502 ~~~~~i~~~l~~~~~d~----~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~ 573 (615)
.+.+.+++.+.+.+.|. ...+|..|.+.+..+...-. ...-+.+.+..-|+.+..|.-+.++..++.
T Consensus 687 ~fr~~iln~l~nY~~d~rGDVgs~iR~~a~klm~SfL~kD~-----~~~~~y~iR~~~dki~~lR~l~yqa~eqI~ 757 (993)
T COG5234 687 EFRKEILNVLSNYLTDTRGDVGSWIRKPAMKLMSSFLVKDS-----SGKKLYIIRQTFDKIDSLRGLAYQALEQIR 757 (993)
T ss_pred HHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhccc-----cCCchhHHHHhhcccHHHHhhhhhhhhhee
Confidence 34556777777766543 55678888888877542210 123456778888999999988888777663
No 161
>KOG1993|consensus
Probab=96.83 E-value=0.61 Score=49.04 Aligned_cols=267 Identities=14% Similarity=0.110 Sum_probs=135.3
Q ss_pred ccchhhhhhhcCCcH--HHHHHHHHHhccccCCCCCcchhhhchHHHhhhhcCc-hhHHHHHHHHHHHHHHhhcChhHHh
Q psy14014 51 GELIPFLTETIYDED--EVLLALAEQLGTFTPNVGGPEYVHCLLPPLESLATVE-ETVVRDKAVESLRLISAQHSPHDLE 127 (615)
Q Consensus 51 ~~ll~~l~~~~~~~~--~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~l~~~~-~~~vr~~a~~~l~~l~~~~~~~~~~ 127 (615)
+.++|-+. .+..+ ..|+.++-.+|..+..-...+..+-+...+.+++.|+ |..||..++.+++....... ..+
T Consensus 487 ~~llpEl~--~~~~~~RiiRRRVa~ilg~Wvsvq~~~e~k~l~Y~a~lnLL~d~~D~vV~Ltt~~tlkl~vDD~n--F~~ 562 (978)
T KOG1993|consen 487 EALLPELA--NDHGNSRIIRRRVAWILGQWVSVQQKLELKPLLYCAFLNLLQDQNDLVVRLTTARTLKLVVDDWN--FSE 562 (978)
T ss_pred HhhCHHhh--hcccchhHHHHHHHHHHhhhhheechHhHHHHHHHHHHHhcCccccceeehHHHHHHHHhhhhcc--CCh
Confidence 45555554 12222 3788898889887763222344455566678888887 77899999999988776653 223
Q ss_pred hhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHHHHHhCC-CChHHHHHHHHhHHHHHHHhchh--hhH
Q psy14014 128 AHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQD-DTPMVRRAAAGKLGELAKVVEVD--YLK 204 (615)
Q Consensus 128 ~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~~l~~d-~~~~vR~~a~~~l~~l~~~~~~~--~~~ 204 (615)
+.++|++..+. ..+.+++.. ...+-|-.++..++.+....++. +..
T Consensus 563 dsFlp~lenlf-------------------------------~~lfkll~~~~e~Dtk~~VL~~ls~lI~r~~e~I~P~~ 611 (978)
T KOG1993|consen 563 DSFLPYLENLF-------------------------------VLLFKLLKAVEECDTKTSVLNLLSTLIERVSEHIAPYA 611 (978)
T ss_pred hhhhhhHHHHH-------------------------------HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHH
Confidence 34555542211 111122111 23345666666666666555432 223
Q ss_pred hhhHHHHHHhhc--cCchhHHHHHHHHHHHHHhhcChh--hHHHhHHHHHHHhcCCCChH---HHHHHHHHHHHHHHHhC
Q psy14014 205 TDIIPMFVNLAQ--DEQDSVRLLAVEACVSIASLLSQS--DVEQLVMPTLRQCSGDTSWR---VRYMVADKFTDLQKAVG 277 (615)
Q Consensus 205 ~~ll~~l~~~~~--d~~~~vr~~a~~~l~~l~~~~~~~--~~~~~l~~~l~~~~~d~~~~---vR~~~~~~l~~l~~~~~ 277 (615)
..++.++..+.+ .+.+-.|.+.+.++..+...++.+ .+.+.+.|.+....+-.++. .-.-..+..+.+.....
T Consensus 612 ~~ivq~lp~LWe~s~~e~lLr~alL~~L~~lV~alg~qS~~~~~fL~pVIel~~D~~sP~hv~L~EDgmeLW~~~L~n~~ 691 (978)
T KOG1993|consen 612 STIVQYLPLLWEESEEEPLLRCALLATLRNLVNALGAQSFEFYPFLYPVIELSTDPSSPEHVYLLEDGMELWLTTLMNSQ 691 (978)
T ss_pred HHHHHHHHHHHhhhccCcHHHHHHHHHHHHHHHHhccCCccchHHHHHHHHHhcCCCCCceeehhhhHHHHHHHHHhccc
Confidence 344444444433 356678999999999999998864 44566777665443322332 22233333333333221
Q ss_pred cc-chhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhh
Q psy14014 278 PE-ITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGL 354 (615)
Q Consensus 278 ~~-~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l 354 (615)
.- ...-.+.|.+...++-.....| .+...+..++-..... ..+.+...+...+.+++.|-..+--.+.++.+..+
T Consensus 692 ~l~p~ll~L~p~l~~~iE~ste~L~-t~l~Ii~sYilLd~~~-fl~~y~~~i~k~~~~~l~dvr~egl~avLkiveil 767 (978)
T KOG1993|consen 692 KLTPELLLLFPHLLYIIEQSTENLP-TVLMIISSYILLDNTV-FLNDYAFGIFKKLNDLLDDVRNEGLQAVLKIVEIL 767 (978)
T ss_pred ccCHHHHHHHHHHHHHHHhhhhhHH-HHHHHHHHHHhhccHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 10 0011455555555544443333 2333443333222211 11123344455555555543333333444444333
No 162
>KOG0392|consensus
Probab=96.80 E-value=0.078 Score=58.17 Aligned_cols=228 Identities=17% Similarity=0.133 Sum_probs=124.9
Q ss_pred HHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHH------------HhhcCC-cHHHHHHHHHHHHHHHhh
Q psy14014 248 PTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQ------------MLLKDS-EAEVRAAAANKVRDFCQN 314 (615)
Q Consensus 248 ~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~------------~~l~d~-~~~vr~~a~~~l~~~~~~ 314 (615)
..+...+-++.|.+|..++-.+-.+...-++......+-..+. ++..|+ ...||++++++|+.+..+
T Consensus 80 e~L~~~~~~~~we~rhg~~i~lrei~~~h~~~~~~~~led~~~rll~v~~Ldrf~dfisd~vvapVre~caq~L~~~l~~ 159 (1549)
T KOG0392|consen 80 EELVNDLFEPQWEIRHGAAIALREILKTHGDSLSYELLEDLLIRLLCVLALDRFGDFISDNVVAPVREACAQALGAYLKH 159 (1549)
T ss_pred HHHHHHhcCchhhhhcCcchhhhhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcccccccchhhhHHHHHHHHHHHHHh
Confidence 3334444557777777777666666655554433222111111 222222 247999999999999998
Q ss_pred ccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcc--hhhhhhhHHHHHHhhcCCChhHHHHHHHhhhH
Q psy14014 315 LDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGK--HNTVDHLLPLFLSQLKDECPEVRLNIISNLDC 392 (615)
Q Consensus 315 ~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~--~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~ 392 (615)
+.... ....+..+..++.-++|++|..-+..+......... ..+.+.+++.+...+.|.+..|+..|.+.+..
T Consensus 160 ~~~s~-----~~~~~~il~q~~~q~~w~ir~Ggll~iky~~air~d~l~~~~~~vl~~~i~~L~ds~ddv~~~aa~~l~~ 234 (1549)
T KOG0392|consen 160 MDESL-----IKETLDILLQMLRQPNWEIRHGGLLGIKYNVAIRQDLLFQLLNLVLDFVIEGLEDSDDDVRSVAAQFLVP 234 (1549)
T ss_pred hhhHh-----hHHHHHHHHHHHcCcchhheechHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHHHHHhhh
Confidence 75543 345666777778888999998776666544332221 23445677888889999999999999888765
Q ss_pred hhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCc---hHHHHHHHHhHHH-HhhhChHh-HHHH
Q psy14014 393 VNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKW---RVRLAIIEYMPLL-AGQLGVEF-FDEK 467 (615)
Q Consensus 393 l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~---~vr~~~~~~l~~l-~~~~~~~~-~~~~ 467 (615)
+..... ....+. ++.+... +. ..+.+ +.|-.| .++....+.+... ...++..+ ....
T Consensus 235 ~~s~~v-~l~~~~------i~~lv~~---------l~-~~l~~-lddl~~s~~si~~ll~~l~~~~evl~l~~~~n~~~~ 296 (1549)
T KOG0392|consen 235 APSIQV-KLMVQK------IAKLVHT---------LW-SFLLE-LDDLSSSTASIMHLLDELCIENEVLDLFEQQNLEVG 296 (1549)
T ss_pred hhHHHH-hhhHhH------HHHHHHH---------HH-HHHHH-hhhcchhhHHHHHHHHHHhhhHHHHHHHHHhhhhhc
Confidence 543331 111111 1111000 00 01111 111111 1222222111111 00111111 1235
Q ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHHHHh
Q psy14014 468 LNALCMTWLVDHVYAIREAATLNLKKLVEQF 498 (615)
Q Consensus 468 l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~ 498 (615)
+.|.++.++.+.-..+|.++...+..+...-
T Consensus 297 Lvp~~~p~l~~~i~sv~~a~l~~l~~lle~~ 327 (1549)
T KOG0392|consen 297 LVPRLWPFLRHTISSVRRAALETLAMLLEAD 327 (1549)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 7777888888888889999999988887653
No 163
>PF01347 Vitellogenin_N: Lipoprotein amino terminal region; InterPro: IPR001747 This entry represents a conserved region found in several lipid transport proteins, including vitellogenin, microsomal triglyceride transfer protein and apolipoprotein B-100 []. Vitellinogen precursors provide the major egg yolk proteins that are a source of nutrients during early development of oviparous vertebrates and invertebrates. Vitellinogen precursors are multi-domain apolipoproteins that are cleaved into distinct yolk proteins. Different vitellinogen precursors exist, which are composed of variable combinations of yolk protein components; however, the cleavage sites are conserved. In vertebrates, a complete vitellinogen is composed of an N-terminal signal peptide for export, followed by four regions that can be cleaved into yolk proteins: lipovitellin-1, phosvitin, lipovitellin-2, and a von Willebrand factor type D domain (YGP40) [, ]. Microsomal triglyceride transfer protein (MTTP) is an endoplasmic reticulum lipid transfer protein involved in the biosynthesis and lipid loading of apolipoprotein B. MTTP is also involved in the late stage of CD1d trafficking in the lysosomal compartment, CD1d being the MHC I-like lipid antigen presenting molecule []. Apolipoprotein B can exist in two forms: B-100 and B-48. Apoliporotein B-100 is present on several lipoproteins, including very low-density lipoproteins (VLDL), intermediate density lipoproteins (IDL) and low density lipoproteins (LDL), and can assemble VLDL particles in the liver []. Apolipoprotein B-100 has been linked to the development of atherosclerosis.; GO: 0005319 lipid transporter activity, 0006869 lipid transport; PDB: 1LSH_A.
Probab=96.75 E-value=0.11 Score=56.21 Aligned_cols=184 Identities=12% Similarity=0.126 Sum_probs=99.7
Q ss_pred CChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCC--
Q psy14014 179 DTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGD-- 256 (615)
Q Consensus 179 ~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d-- 256 (615)
.....|+...++++.... . .-+..+..++....-.-. .|...+..+....... ...++..+..+++.
T Consensus 376 ~~~~~r~~~lDal~~aGT----~----~av~~i~~~I~~~~~~~~-ea~~~l~~l~~~~~~P--t~e~l~~l~~L~~~~~ 444 (618)
T PF01347_consen 376 KKEQARKIFLDALPQAGT----N----PAVKFIKDLIKSKKLTDD-EAAQLLASLPFHVRRP--TEELLKELFELAKSPK 444 (618)
T ss_dssp --HHHHHHHHHHHHHH-S----H----HHHHHHHHHHHTT-S-HH-HHHHHHHHHHHT-------HHHHHHHHHHHT-HH
T ss_pred cHHHHHHHHHHHHHHcCC----H----HHHHHHHHHHHcCCCCHH-HHHHHHHHHHhhcCCC--CHHHHHHHHHHHhCcc
Confidence 356778777777777543 1 223333444433221111 1334444444433110 12234444444443
Q ss_pred --CChHHHHHHHHHHHHHHHHhCcc------------chhhhHHHHHHHhh----cCCcHHHHHHHHHHHHHHHhhcccc
Q psy14014 257 --TSWRVRYMVADKFTDLQKAVGPE------------ITKTDLVQAFQMLL----KDSEAEVRAAAANKVRDFCQNLDAY 318 (615)
Q Consensus 257 --~~~~vR~~~~~~l~~l~~~~~~~------------~~~~~l~~~l~~~l----~d~~~~vr~~a~~~l~~~~~~~~~~ 318 (615)
.+..+|.+++.+++.+...+... ...+.+++.+...+ ...+.+.+..++++|+.+..
T Consensus 445 ~~~~~~l~~ta~L~~~~lv~~~c~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~LkaLgN~g~----- 519 (618)
T PF01347_consen 445 VKNSPYLRETALLSLGSLVHKYCVNSDSAEFCDPCSRCIIEKYVPYLEQELKEAVSRGDEEEKIVYLKALGNLGH----- 519 (618)
T ss_dssp HHT-HHHHHHHHHHHHHHHHHHHTT-----------SS--GGGTHHHHHHHHHHHHTT-HHHHHHHHHHHHHHT------
T ss_pred ccCChhHHHHHHHHHHHHhCceeecccccccccccchhhHHHHHHHHHHHHHHHhhccCHHHHHHHHHHhhccCC-----
Confidence 45679999999999887654332 12334555554444 45666788899999997764
Q ss_pred chhHHHHHhhHHHHHHhhCCC---CHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcC--CChhHHHHHHHhh
Q psy14014 319 NQENIIMTYILPYVKDLVADP---NQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKD--ECPEVRLNIISNL 390 (615)
Q Consensus 319 ~~~~~~~~~l~p~l~~~~~d~---~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d--~~~~vr~~a~~~l 390 (615)
+..+|.+...+.+. ...+|.+|+.++..++.... ..+.+.+.+.+.+ ++.+||.+|+..+
T Consensus 520 -------~~~i~~l~~~i~~~~~~~~~~R~~Ai~Alr~~~~~~~-----~~v~~~l~~I~~n~~e~~EvRiaA~~~l 584 (618)
T PF01347_consen 520 -------PESIPVLLPYIEGKEEVPHFIRVAAIQALRRLAKHCP-----EKVREILLPIFMNTTEDPEVRIAAYLIL 584 (618)
T ss_dssp -------GGGHHHHHTTSTTSS-S-HHHHHHHHHTTTTGGGT-H-----HHHHHHHHHHHH-TTS-HHHHHHHHHHH
T ss_pred -------chhhHHHHhHhhhccccchHHHHHHHHHHHHHhhcCc-----HHHHHHHHHHhcCCCCChhHHHHHHHHH
Confidence 34566666666665 78999999999987754322 2345556665544 4578999998655
No 164
>PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain
Probab=96.74 E-value=0.18 Score=48.77 Aligned_cols=139 Identities=14% Similarity=0.209 Sum_probs=94.8
Q ss_pred HHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhh---------
Q psy14014 171 HFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSD--------- 241 (615)
Q Consensus 171 ~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~--------- 241 (615)
++....+++++.||+.+++++|.++-.-. + .-...++.+...++.++..||..|++++..+....|.+.
T Consensus 31 lI~P~v~~~~~~vR~~al~cLGl~~Lld~-~-~a~~~l~l~~~~~~~~~~~v~~~al~~l~Dll~~~g~~~~~~~~~~~~ 108 (298)
T PF12719_consen 31 LILPAVQSSDPAVRELALKCLGLCCLLDK-E-LAKEHLPLFLQALQKDDEEVKITALKALFDLLLTHGIDIFDSESDNDE 108 (298)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHhCh-H-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCchhccchhccCc
Confidence 34567788999999999999998875432 2 234557777777776799999999999988877766421
Q ss_pred --HHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchh-hhHHHHHHHhh----cCCcHHHHHHHHHHHHHHHh
Q psy14014 242 --VEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITK-TDLVQAFQMLL----KDSEAEVRAAAANKVRDFCQ 313 (615)
Q Consensus 242 --~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~-~~l~~~l~~~l----~d~~~~vr~~a~~~l~~~~~ 313 (615)
....+...+.+.+.+.+..+|..+++.+.++.-.-. ... +.++..++-.. ..++..+|+.-...++.++.
T Consensus 109 ~~~~~~l~~~l~~~l~~~~~~~~~~a~EGl~KLlL~~~--i~~~~~vL~~Lll~yF~p~t~~~~~LrQ~L~~Ffp~y~~ 185 (298)
T PF12719_consen 109 SVDSKSLLKILTKFLDSENPELQAIAVEGLCKLLLSGR--ISDPPKVLSRLLLLYFNPSTEDNQRLRQCLSVFFPVYAS 185 (298)
T ss_pred cchHhHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCC--CCcHHHHHHHHHHHHcCcccCCcHHHHHHHHHHHHHHHc
Confidence 134577788888888899999999999998764321 112 34443333222 33456777765555665554
No 165
>PF08506 Cse1: Cse1; InterPro: IPR013713 The exchange of macromolecules between the nucleus and cytoplasm takes place through nuclear pore complexes within the nuclear membrane. Active transport of large molecules through these pore complexes require carrier proteins, called karyopherins (importins and exportins), which shuttle between the two compartments. This domain is found in exportin Cse1 (also known as importin-alpha re-exporter). Exportin Cse1 mediates nuclear transport of importin-alpha back into the cytosol, where importin-alpha functions as a transporter of proteins carrying nuclear localisation signals (NLS) from the cytoplasm into the nucleus [, , ]. This domain contains HEAT repeats. More information about these proteins can be found at Protein of the Month: Importins [].; GO: 0006886 intracellular protein transport; PDB: 1Z3H_B 1WA5_C.
Probab=96.73 E-value=0.39 Score=47.56 Aligned_cols=127 Identities=15% Similarity=0.176 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhc------CCcHHHHHHHHHHHHHHHhhcccc-----------chhH
Q psy14014 260 RVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLK------DSEAEVRAAAANKVRDFCQNLDAY-----------NQEN 322 (615)
Q Consensus 260 ~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~------d~~~~vr~~a~~~l~~~~~~~~~~-----------~~~~ 322 (615)
..|.+|++.+..++..++... ..-+...+...+. ..++.-+.+|+..++.++...... .-.+
T Consensus 226 TrR~AA~dfl~~L~~~~~~~v-~~i~~~~i~~~l~~y~~~~~~~w~~KD~Al~Li~ala~k~~t~~~Gvt~~~~~v~v~~ 304 (370)
T PF08506_consen 226 TRRRAACDFLRSLCKKFEKQV-TSILMQYIQQLLQQYASNPSNNWRSKDGALYLIGALASKGSTTKSGVTQTNELVDVVD 304 (370)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH-TTT-HHHHHHHHHHHHHHHBSS--BTTB-S-B-TTS-HHH
T ss_pred CcHHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHhhCCcccHHHHHHHHHHHHHHHhhhccccCCcccccccccHHH
Confidence 457788888888887765432 1122233333333 356777888999888888654221 1134
Q ss_pred HHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcCCChhHHHHHHHh
Q psy14014 323 IIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISN 389 (615)
Q Consensus 323 ~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d~~~~vr~~a~~~ 389 (615)
.+.+.++|-|. --.+..+-+|..+++.+...-..+.++.. ..++|.+.++|++++.-|+..|+.+
T Consensus 305 Ff~~~v~peL~-~~~~~~piLka~aik~~~~Fr~~l~~~~l-~~~~~~l~~~L~~~~~vv~tyAA~~ 369 (370)
T PF08506_consen 305 FFSQHVLPELQ-PDVNSHPILKADAIKFLYTFRNQLPKEQL-LQIFPLLVNHLQSSSYVVHTYAAIA 369 (370)
T ss_dssp HHHHHTCHHHH--SS-S-HHHHHHHHHHHHHHGGGS-HHHH-HHHHHHHHHHTTSS-HHHHHHHHHH
T ss_pred HHHHHhHHHhc-ccCCCCcchHHHHHHHHHHHHhhCCHHHH-HHHHHHHHHHhCCCCcchhhhhhhh
Confidence 56777888887 44567788999999999888777665543 4589999999999888888877654
No 166
>KOG2933|consensus
Probab=96.66 E-value=0.056 Score=50.04 Aligned_cols=171 Identities=12% Similarity=0.136 Sum_probs=112.7
Q ss_pred HHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHH---HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhh--hc
Q psy14014 432 SIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDE---KLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQ--ST 506 (615)
Q Consensus 432 ~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~---~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~--~~ 506 (615)
.....+++.+|.....++..+..++.... +...+ .++..+.+-++.....|-.+|+.+++.+...++..... +.
T Consensus 92 ~~l~~L~s~dW~~~vdgLn~irrLs~fh~-e~l~~~L~~vii~vvkslKNlRS~VsraA~~t~~difs~ln~~i~~~ld~ 170 (334)
T KOG2933|consen 92 QALKKLSSDDWEDKVDGLNSIRRLSEFHP-ESLNPMLHEVIIAVVKSLKNLRSAVSRAACMTLADIFSSLNNSIDQELDD 170 (334)
T ss_pred HHHHHhchHHHHHHhhhHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456778899999888888888765433 32232 34444566688888999999999999999988765432 11
Q ss_pred hhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhh----hHH
Q psy14014 507 VIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETN----VIQ 582 (615)
Q Consensus 507 i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~----~~~ 582 (615)
.+-.|+.-....+..+|..+-++|..+..+..+.. +++.|...+....+.+|-.++.++.+....++-. .+.
T Consensus 171 lv~~Ll~ka~~dnrFvreda~kAL~aMV~~vtp~~----~L~~L~~~~~~~n~r~r~~a~~~~~~~v~rl~v~~~~~~~~ 246 (334)
T KOG2933|consen 171 LVTQLLHKASQDNRFVREDAEKALVAMVNHVTPQK----LLRKLIPILQHSNPRVRAKAALCFSRCVIRLGVLPVLLQGS 246 (334)
T ss_pred HHHHHHhhhcccchHHHHHHHHHHHHHHhccChHH----HHHHHHHHHhhhchhhhhhhhccccccceeccccchhhHhH
Confidence 22222222345577899999999999998877755 4455555567788999999999998887766511 122
Q ss_pred hhHHHHHhhhcCCCCccHHHHHHHH
Q psy14014 583 SQVKPALDKLNGDTDVDVKYFAQEA 607 (615)
Q Consensus 583 ~~~~~~l~~l~~d~d~~v~~~a~~a 607 (615)
....+.+..=..|+-++++..|...
T Consensus 247 ~dl~~a~~~~~~d~Lp~~~~~a~~~ 271 (334)
T KOG2933|consen 247 CDLSRAAQEQGSDKLPELREAARFV 271 (334)
T ss_pred HHHHHHHHhhhcccccccccchhHH
Confidence 2233333333466666666555443
No 167
>PF13251 DUF4042: Domain of unknown function (DUF4042)
Probab=96.64 E-value=0.036 Score=48.18 Aligned_cols=62 Identities=15% Similarity=0.112 Sum_probs=39.3
Q ss_pred CCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhch
Q psy14014 295 DSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSP 356 (615)
Q Consensus 295 d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~ 356 (615)
+.+..+-...++++..++...+-..-...+...++..+..++.+.+..||.+++.+++.+..
T Consensus 113 E~~~~~l~q~lK~la~Lv~~tPY~rL~~~ll~~~v~~v~~~l~~~d~~v~v~~l~~~~~l~s 174 (182)
T PF13251_consen 113 EKSPPVLTQLLKCLAVLVQATPYHRLPPGLLTEVVTQVRPLLRHRDPNVRVAALSCLGALLS 174 (182)
T ss_pred ccccHHHHHHHHHHHHHHccCChhhcCHhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHc
Confidence 44666777788888888776654433334555666666666666666777666666655543
No 168
>COG5656 SXM1 Importin, protein involved in nuclear import [Posttranslational modification, protein turnover, chaperones]
Probab=96.53 E-value=1.3 Score=46.36 Aligned_cols=141 Identities=13% Similarity=0.048 Sum_probs=99.3
Q ss_pred HHHHHHHHHhcC-----C---cchHHHHHHHHHHHHHHHHhCh-----HHhhhchhHHHHhhhcCCCchHHHHHHHHHHH
Q psy14014 466 EKLNALCMTWLV-----D---HVYAIREAATLNLKKLVEQFGS-----EWAQSTVIPKVVAMSRDQNYLHRMTCLFCINV 532 (615)
Q Consensus 466 ~~l~~~l~~~l~-----d---~~~~vR~~a~~~l~~l~~~~~~-----~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~ 532 (615)
..+++.+...++ + .+....+.|+..+..+...+.. ......+++++...++++..-.|..+|..+..
T Consensus 407 qgiLsf~~sil~qsaa~psn~dnarq~egalr~lasi~s~itk~sp~an~me~fiv~hv~P~f~s~ygfL~Srace~is~ 486 (970)
T COG5656 407 QGILSFLLSILGQSAATPSNIDNARQAEGALRLLASIKSFITKMSPAANVMEYFIVNHVIPAFRSNYGFLKSRACEFIST 486 (970)
T ss_pred hhHHHHHHHHHhcccCCCCccccHHHHhhHHHHHHHHHHHhccCchHHHHHHHHHHHHhhHhhcCcccchHHHHHHHHHH
Confidence 345565555552 2 3455667788887777763321 12334577888888899988899999999999
Q ss_pred HHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhh-hhhHHhhHHHHHhhh---cCCCCccHHHHHHH
Q psy14014 533 LAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILE-TNVIQSQVKPALDKL---NGDTDVDVKYFAQE 606 (615)
Q Consensus 533 l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~-~~~~~~~~~~~l~~l---~~d~d~~v~~~a~~ 606 (615)
+.+..........+.....+++++++-.|+..|+-|+..++.... ...+...+.+++++| .++=+-|+-.-..+
T Consensus 487 ~eeDfkd~~ill~aye~t~ncl~nn~lpv~ieAalAlq~fi~~~q~h~k~sahVp~tmekLLsLSn~feiD~LS~vMe 564 (970)
T COG5656 487 IEEDFKDNGILLEAYENTHNCLKNNHLPVMIEAALALQFFIFNEQSHEKFSAHVPETMEKLLSLSNTFEIDPLSMVME 564 (970)
T ss_pred HHHhcccchHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHhchhhhHHHHhhhhHHHHHHHHhcccccchHHHHHHH
Confidence 976666555666777888888999999999999999998875432 345667788888886 46656665544443
No 169
>cd00256 VATPase_H VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments. The topology is that of a superhelical spiral, in part the geometry is similar to superhelices composed of armadillo repeat motifs, as found in importins for example.
Probab=96.50 E-value=1.1 Score=45.02 Aligned_cols=146 Identities=10% Similarity=0.075 Sum_probs=74.0
Q ss_pred HHHHhhccCchhHHHHHHHHHHHHHhhcCh---hhHHHhHHHHHHHhcCCC-ChHHHHHHHHHHHHHHHHhC--ccchhh
Q psy14014 210 MFVNLAQDEQDSVRLLAVEACVSIASLLSQ---SDVEQLVMPTLRQCSGDT-SWRVRYMVADKFTDLQKAVG--PEITKT 283 (615)
Q Consensus 210 ~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~---~~~~~~l~~~l~~~~~d~-~~~vR~~~~~~l~~l~~~~~--~~~~~~ 283 (615)
.|..+++.+++.+...|...+..+...-+. ....+.+.+.+...+..+ +......++.++..+...-. .-....
T Consensus 105 ~fl~lL~~~d~~i~~~a~~iLt~l~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~~~v~~L~~LL~~~~~R~~f~~~ 184 (429)
T cd00256 105 PFFNLLNRQDQFIVHMSFSILAKLACFGLAKMEGSDLDYYFNWLKEQLNNITNNDYVQTAARCLQMLLRVDEYRFAFVLA 184 (429)
T ss_pred HHHHHHcCCchhHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHhhccCCcchHHHHHHHHHHHhCCchHHHHHHHc
Confidence 334466677888888888888887654222 122334555666665543 34556666677766643211 001112
Q ss_pred hHHHHHHHhhcCC--cHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCC-CCHHHHHHHHHHHHhhchh
Q psy14014 284 DLVQAFQMLLKDS--EAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVAD-PNQHVKSALASVIMGLSPI 357 (615)
Q Consensus 284 ~l~~~l~~~l~d~--~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d-~~~~vR~~~~~~l~~l~~~ 357 (615)
..++.+...++.. ..+..-.++.++=.+ .+.++..+......++|.+.+++++ .-++|-+-++.++.++...
T Consensus 185 ~~v~~L~~~L~~~~~~~Ql~Y~~ll~lWlL--SF~~~~~~~~~~~~~i~~l~~i~k~s~KEKvvRv~l~~l~Nll~~ 259 (429)
T cd00256 185 DGVPTLVKLLSNATLGFQLQYQSIFCIWLL--TFNPHAAEVLKRLSLIQDLSDILKESTKEKVIRIVLAIFRNLISK 259 (429)
T ss_pred cCHHHHHHHHhhccccHHHHHHHHHHHHHH--hccHHHHHhhccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhc
Confidence 2445555555432 223333333322111 1222211111124577777777664 3456666777777777654
No 170
>cd00256 VATPase_H VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments. The topology is that of a superhelical spiral, in part the geometry is similar to superhelices composed of armadillo repeat motifs, as found in importins for example.
Probab=96.43 E-value=1.2 Score=44.70 Aligned_cols=294 Identities=12% Similarity=0.045 Sum_probs=139.6
Q ss_pred hcCCCChHHHHHHHHHHHHHHHHhCccch---hhhHHHHHHHhhcCC-cHHHHHHHHHHHHHHHhhccccchhHHHHHhh
Q psy14014 253 CSGDTSWRVRYMVADKFTDLQKAVGPEIT---KTDLVQAFQMLLKDS-EAEVRAAAANKVRDFCQNLDAYNQENIIMTYI 328 (615)
Q Consensus 253 ~~~d~~~~vR~~~~~~l~~l~~~~~~~~~---~~~l~~~l~~~l~d~-~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l 328 (615)
+++.+++.+...++..+..+...-..... ...+.+.+...++.. +...+..++.++..++.. ++.+..++....
T Consensus 109 lL~~~d~~i~~~a~~iLt~l~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~~~v~~L~~LL~~--~~~R~~f~~~~~ 186 (429)
T cd00256 109 LLNRQDQFIVHMSFSILAKLACFGLAKMEGSDLDYYFNWLKEQLNNITNNDYVQTAARCLQMLLRV--DEYRFAFVLADG 186 (429)
T ss_pred HHcCCchhHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHhhccCCcchHHHHHHHHHHHhCC--chHHHHHHHccC
Confidence 55677899999999998888653222111 122444555555433 345566677788777652 233322223334
Q ss_pred HHHHHHhhCCC--CHHHHHHHHHHHHhhc--hhhcchhhhhhhHHHHHHhhcCCC-hhHHHHHHHhhhHhhhhhchhHHH
Q psy14014 329 LPYVKDLVADP--NQHVKSALASVIMGLS--PILGKHNTVDHLLPLFLSQLKDEC-PEVRLNIISNLDCVNEVIGIQQWR 403 (615)
Q Consensus 329 ~p~l~~~~~d~--~~~vR~~~~~~l~~l~--~~~g~~~~~~~l~p~l~~~l~d~~-~~vr~~a~~~l~~l~~~~~~~~~~ 403 (615)
++.+..+++.. +.+..-.++-++..++ ...-.......++|.+.+.+++.. +.|-+-++..+..+........-.
T Consensus 187 v~~L~~~L~~~~~~~Ql~Y~~ll~lWlLSF~~~~~~~~~~~~~i~~l~~i~k~s~KEKvvRv~l~~l~Nll~~~~~~~~~ 266 (429)
T cd00256 187 VPTLVKLLSNATLGFQLQYQSIFCIWLLTFNPHAAEVLKRLSLIQDLSDILKESTKEKVIRIVLAIFRNLISKRVDREVK 266 (429)
T ss_pred HHHHHHHHhhccccHHHHHHHHHHHHHHhccHHHHHhhccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhcccccchh
Confidence 55555555432 2344433333333332 110011112357888888887632 334444444555444322111100
Q ss_pred HHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChH-----hHHHHHHHHHHHhcC-
Q psy14014 404 VRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVE-----FFDEKLNALCMTWLV- 477 (615)
Q Consensus 404 ~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~-----~~~~~l~~~l~~~l~- 477 (615)
... .+.+. +..+ +.+.+.++...|.-- ...+-+..+...+... -|..+.-..-...|.
T Consensus 267 ~~~-----~~~mv--------~~~l--~~~l~~L~~rk~~De-dL~edl~~L~e~L~~~~k~ltsfD~Y~~El~sg~L~W 330 (429)
T cd00256 267 KTA-----ALQMV--------QCKV--LKTLQSLEQRKYDDE-DLTDDLKFLTEELKNSVQDLSSFDEYKSELRSGRLHW 330 (429)
T ss_pred hhH-----HHHHH--------HcCh--HHHHHHHhcCCCCcH-HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhcCCccC
Confidence 000 00000 0001 223333333333211 1122222222111111 022222221111221
Q ss_pred ---Cc-chHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhc-CCCchHHHHHHHHHHHHHhhhChhh-HHH--hhHHH
Q psy14014 478 ---DH-VYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSR-DQNYLHRMTCLFCINVLAEACGPTV-TAN--FLLPT 549 (615)
Q Consensus 478 ---d~-~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~-d~~~~~R~~a~~~l~~l~~~~~~~~-~~~--~i~~~ 549 (615)
|. ..--|+.+.+ +..+. -.++..|.+++. +.++.+-..||.=+|.+++..+... ..+ .....
T Consensus 331 Sp~H~se~FW~EN~~k--------f~~~~--~~llk~L~~iL~~s~d~~~laVAc~Dige~vr~~P~gr~i~~~lg~K~~ 400 (429)
T cd00256 331 SPVHKSEKFWRENADR--------LNEKN--YELLKILIHLLETSVDPIILAVACHDIGEYVRHYPRGKDVVEQLGGKQR 400 (429)
T ss_pred CCCCCCchHHHHHHHH--------HHhcc--hHHHHHHHHHHhcCCCcceeehhhhhHHHHHHHCccHHHHHHHcCcHHH
Confidence 11 1223444433 22111 135666666663 4466666778888999998875432 222 36677
Q ss_pred HHhhCCCCCchHHHHHHHHHHHHhH
Q psy14014 550 VLNMAGDNVANVRFNVAKTLQKIGP 574 (615)
Q Consensus 550 l~~~~~D~~~~vr~~a~~~l~~l~~ 574 (615)
+.++++++|++||..|..|+..+.-
T Consensus 401 vM~Lm~h~d~~Vr~eAL~avQklm~ 425 (429)
T cd00256 401 VMRLLNHEDPNVRYEALLAVQKLMV 425 (429)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 8888999999999999999998853
No 171
>smart00638 LPD_N Lipoprotein N-terminal Domain.
Probab=96.34 E-value=0.25 Score=52.99 Aligned_cols=184 Identities=11% Similarity=0.115 Sum_probs=101.4
Q ss_pred hHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhc--ChhhHHHhHHHHHHHhcCC--
Q psy14014 181 PMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLL--SQSDVEQLVMPTLRQCSGD-- 256 (615)
Q Consensus 181 ~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~--~~~~~~~~l~~~l~~~~~d-- 256 (615)
+..|....+++...+. ..-+..+.+.+....-.-. .+.+.+..+...+ +... ++..+..++++
T Consensus 340 ~~~r~~~~Dal~~~GT--------~~a~~~i~~~i~~~~~~~~-ea~~~~~~~~~~~~~Pt~~----~l~~l~~l~~~~~ 406 (574)
T smart00638 340 KKARRIFLDAVAQAGT--------PPALKFIKQWIKNKKITPL-EAAQLLAVLPHTARYPTEE----ILKALFELAESPE 406 (574)
T ss_pred HHHHHHHHHHHHhcCC--------HHHHHHHHHHHHcCCCCHH-HHHHHHHHHHHhhhcCCHH----HHHHHHHHhcCcc
Confidence 5666666666655432 2233444444443332211 1223333333332 2222 44444444443
Q ss_pred --CChHHHHHHHHHHHHHHHHhCccch------hhhHHHHHHHhh----cCCcHHHHHHHHHHHHHHHhhccccchhHHH
Q psy14014 257 --TSWRVRYMVADKFTDLQKAVGPEIT------KTDLVQAFQMLL----KDSEAEVRAAAANKVRDFCQNLDAYNQENII 324 (615)
Q Consensus 257 --~~~~vR~~~~~~l~~l~~~~~~~~~------~~~l~~~l~~~l----~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~ 324 (615)
++..+|.++..+++.+......+.. ...+++.+...+ ++.+.+.+..++++|+.+... ..
T Consensus 407 ~~~~~~l~~sa~l~~~~lv~~~c~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~LkaLGN~g~~--------~~ 478 (574)
T smart00638 407 VQKQPYLRESALLAYGSLVRRYCVNTPSCPDFVLEELLKYLHELLQQAVSKGDEEEIQLYLKALGNAGHP--------SS 478 (574)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHHHHHHHHhcCCchheeeHHHhhhccCCh--------hH
Confidence 4678999999999998875443321 245666665544 345556677888888866541 11
Q ss_pred HHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchhhhhhhHHHHHHhhcC--CChhHHHHHHHhhh
Q psy14014 325 MTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKD--ECPEVRLNIISNLD 391 (615)
Q Consensus 325 ~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~p~l~~~l~d--~~~~vr~~a~~~l~ 391 (615)
...+.|++. .-...+..+|..++.++..++.... . .+.+.+.+.+.+ ++.+||..|+..+-
T Consensus 479 i~~l~~~l~-~~~~~~~~iR~~Av~Alr~~a~~~p-~----~v~~~l~~i~~n~~e~~EvRiaA~~~lm 541 (574)
T smart00638 479 IKVLEPYLE-GAEPLSTFIRLAAILALRNLAKRDP-R----KVQEVLLPIYLNRAEPPEVRMAAVLVLM 541 (574)
T ss_pred HHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHhCc-h----HHHHHHHHHHcCCCCChHHHHHHHHHHH
Confidence 233344433 1224567899999999997765322 2 234455555544 56789999987653
No 172
>KOG0392|consensus
Probab=96.31 E-value=0.15 Score=56.20 Aligned_cols=225 Identities=16% Similarity=0.109 Sum_probs=140.1
Q ss_pred hchHHHhhhhcCchhHHHHHHHHHHHHHHhhcCh----hHHhhhHHHHHHHhhcC-------C--CcchhhhHHhhhhhh
Q psy14014 90 CLLPPLESLATVEETVVRDKAVESLRLISAQHSP----HDLEAHFVPLVQRLASG-------D--WFTSRTSACGLFSVC 156 (615)
Q Consensus 90 ~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~----~~~~~~~l~~l~~l~~~-------~--~~~~r~~a~~~l~~~ 156 (615)
.++..|....-++..++|+.+.-+++.+.+.... ..++..+.-++..++-| + -..+|.+++..++.+
T Consensus 77 s~~e~L~~~~~~~~we~rhg~~i~lrei~~~h~~~~~~~~led~~~rll~v~~Ldrf~dfisd~vvapVre~caq~L~~~ 156 (1549)
T KOG0392|consen 77 SFLEELVNDLFEPQWEIRHGAAIALREILKTHGDSLSYELLEDLLIRLLCVLALDRFGDFISDNVVAPVREACAQALGAY 156 (1549)
T ss_pred HHHHHHHHHhcCchhhhhcCcchhhhhHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcccccccchhhhHHHHHHHHHHH
Confidence 3455566666788999999999999998776554 22333333333333221 1 136899999999999
Q ss_pred ccCCChhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhch--hhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHH
Q psy14014 157 YPRVTAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEV--DYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIA 234 (615)
Q Consensus 157 ~~~~~~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~--~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~ 234 (615)
..+..+....+.++.+.+++.-+.|++|..-+..+........+ .......++.+.+.+.|.+..||..|...+..++
T Consensus 157 l~~~~~s~~~~~~~il~q~~~q~~w~ir~Ggll~iky~~air~d~l~~~~~~vl~~~i~~L~ds~ddv~~~aa~~l~~~~ 236 (1549)
T KOG0392|consen 157 LKHMDESLIKETLDILLQMLRQPNWEIRHGGLLGIKYNVAIRQDLLFQLLNLVLDFVIEGLEDSDDDVRSVAAQFLVPAP 236 (1549)
T ss_pred HHhhhhHhhHHHHHHHHHHHcCcchhheechHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHHHHHhhhhh
Confidence 99999988999999999999988999999888777655442211 2334567788888999999999999999988776
Q ss_pred hhcChh---h---HHHhHHHHHHHhcCCCChH---HHHHHHHHHHHH-HHHhCccch-hhhHHHHHHHhhcCCcHHHHHH
Q psy14014 235 SLLSQS---D---VEQLVMPTLRQCSGDTSWR---VRYMVADKFTDL-QKAVGPEIT-KTDLVQAFQMLLKDSEAEVRAA 303 (615)
Q Consensus 235 ~~~~~~---~---~~~~l~~~l~~~~~d~~~~---vR~~~~~~l~~l-~~~~~~~~~-~~~l~~~l~~~l~d~~~~vr~~ 303 (615)
....+. . ....+...+.++ .|-+|. .|....+.+... ...+..+.. ...+.|-+...+.+.-..+|.+
T Consensus 237 s~~v~l~~~~i~~lv~~l~~~l~~l-ddl~~s~~si~~ll~~l~~~~evl~l~~~~n~~~~Lvp~~~p~l~~~i~sv~~a 315 (1549)
T KOG0392|consen 237 SIQVKLMVQKIAKLVHTLWSFLLEL-DDLSSSTASIMHLLDELCIENEVLDLFEQQNLEVGLVPRLWPFLRHTISSVRRA 315 (1549)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHHHh-hhcchhhHHHHHHHHHHhhhHHHHHHHHHhhhhhccchhhHHHHHHHHHHHHHH
Confidence 665321 1 111122222222 234432 222222221111 000011101 1245555555666666778888
Q ss_pred HHHHHHHHHhhc
Q psy14014 304 AANKVRDFCQNL 315 (615)
Q Consensus 304 a~~~l~~~~~~~ 315 (615)
++..+..+.+.-
T Consensus 316 ~l~~l~~lle~~ 327 (1549)
T KOG0392|consen 316 ALETLAMLLEAD 327 (1549)
T ss_pred HHHHHHHHHhcC
Confidence 888888777643
No 173
>KOG1822|consensus
Probab=96.31 E-value=3.3 Score=48.44 Aligned_cols=121 Identities=12% Similarity=0.089 Sum_probs=84.9
Q ss_pred hhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCc-HHHHHHHHHHHHHHHhhccc
Q psy14014 239 QSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSE-AEVRAAAANKVRDFCQNLDA 317 (615)
Q Consensus 239 ~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~-~~vr~~a~~~l~~~~~~~~~ 317 (615)
++.+...-...+...+..+++..|..+.++++.++...+.......+...+.+-+.+.. +-.|..-.-+++.+-++.+.
T Consensus 870 ~e~v~~~~~~l~~~sl~~~~p~~rc~~~ea~arLaq~v~~~~f~a~~aq~~fdklas~~d~i~R~ghslalg~lhkyvgs 949 (2067)
T KOG1822|consen 870 PEEVRSSALTLIVNSLINPNPKLRCAAAEALARLAQVVGSAPFVASLAQNSFDKLASARDPITRTGHSLALGCLHKYVGS 949 (2067)
T ss_pred HHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhccC
Confidence 34444445555666777889999999999999999999887766677777776666654 55566667777777776554
Q ss_pred cchhHHHHHhhHHHHHHhhCCCCH-HHHHHHHHHHHhhchhhcc
Q psy14014 318 YNQENIIMTYILPYVKDLVADPNQ-HVKSALASVIMGLSPILGK 360 (615)
Q Consensus 318 ~~~~~~~~~~l~p~l~~~~~d~~~-~vR~~~~~~l~~l~~~~g~ 360 (615)
.... .....-+..+..+.+|+.. .|+...+.++..+....|+
T Consensus 950 ~~s~-qhl~t~v~illal~~Ds~~p~VqtwSL~al~~i~~s~~p 992 (2067)
T KOG1822|consen 950 IGSG-QHLNTSVSILLALATDSTSPVVQTWSLHALALILDSSGP 992 (2067)
T ss_pred CCCc-hhcccHHHHHHHHhhcCCCchhhhhHHHHHHHHHcCCCc
Confidence 3322 2334444566677777665 9999999988888776665
No 174
>PF10363 DUF2435: Protein of unknown function (DUF2435)
Probab=96.30 E-value=0.053 Score=41.27 Aligned_cols=79 Identities=22% Similarity=0.190 Sum_probs=59.8
Q ss_pred HHHHhCCCChHHHHHHHHhHHHHHHHhc-hhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHH
Q psy14014 172 FRNLCQDDTPMVRRAAAGKLGELAKVVE-VDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTL 250 (615)
Q Consensus 172 l~~l~~d~~~~vR~~a~~~l~~l~~~~~-~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l 250 (615)
.+..+.|+.+.||..++..|..+.+.-. .....+.++.++.+.++|+++-|--.|++++..++...+.. ++|.+
T Consensus 8 al~~L~dp~~PvRa~gL~~L~~Li~~~~~~~~~~~~il~l~l~~L~d~DsyVYL~aI~~L~~La~~~p~~-----vl~~L 82 (92)
T PF10363_consen 8 ALSDLNDPLPPVRAHGLVLLRKLIESKSEPVIDIPKILDLFLSQLKDEDSYVYLNAIKGLAALADRHPDE-----VLPIL 82 (92)
T ss_pred HHHHccCCCcchHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHChHH-----HHHHH
Confidence 4555688888899998888888887665 44456788888889999999999999999999988876653 45555
Q ss_pred HHhcC
Q psy14014 251 RQCSG 255 (615)
Q Consensus 251 ~~~~~ 255 (615)
.+...
T Consensus 83 ~~~y~ 87 (92)
T PF10363_consen 83 LDEYA 87 (92)
T ss_pred HHHHh
Confidence 44333
No 175
>PF14664 RICTOR_N: Rapamycin-insensitive companion of mTOR, N-term
Probab=96.25 E-value=0.98 Score=44.81 Aligned_cols=175 Identities=17% Similarity=0.208 Sum_probs=76.2
Q ss_pred ChHHHHHHHHhHHHHHHHh-chhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCC
Q psy14014 180 TPMVRRAAAGKLGELAKVV-EVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTS 258 (615)
Q Consensus 180 ~~~vR~~a~~~l~~l~~~~-~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~ 258 (615)
...-|.+|.+.+..+...- +.......+...+....+++++..|..|++++.+++-.-|.-.....-+..+.+.+-|+.
T Consensus 81 ~~~ER~QALkliR~~l~~~~~~~~~~~~vvralvaiae~~~D~lr~~cletL~El~l~~P~lv~~~gG~~~L~~~l~d~~ 160 (371)
T PF14664_consen 81 NDVEREQALKLIRAFLEIKKGPKEIPRGVVRALVAIAEHEDDRLRRICLETLCELALLNPELVAECGGIRVLLRALIDGS 160 (371)
T ss_pred ChHHHHHHHHHHHHHHHhcCCcccCCHHHHHHHHHHHhCCchHHHHHHHHHHHHHHhhCHHHHHHcCCHHHHHHHHHhcc
Confidence 3445556666555555441 111223344455555555666666666666666655444332222223344444444433
Q ss_pred hHHHHHHHHHHHHHHHH------hCccchhhhHHHHHHHh----hcCCcH-HHHHHHHHHHHHHHhhccccchhHHHHHh
Q psy14014 259 WRVRYMVADKFTDLQKA------VGPEITKTDLVQAFQML----LKDSEA-EVRAAAANKVRDFCQNLDAYNQENIIMTY 327 (615)
Q Consensus 259 ~~vR~~~~~~l~~l~~~------~~~~~~~~~l~~~l~~~----l~d~~~-~vr~~a~~~l~~~~~~~~~~~~~~~~~~~ 327 (615)
...-..++.++-.+... +......+.++..+.+. .++... +.-+++..++..+.+..+.-..-....-.
T Consensus 161 ~~~~~~l~~~lL~lLd~p~tR~yl~~~~dL~~l~apftd~~~~~~~~~~~~~~l~~s~~ai~~~LrsW~GLl~l~~~~~~ 240 (371)
T PF14664_consen 161 FSISESLLDTLLYLLDSPRTRKYLRPGFDLESLLAPFTDFHYRKIKDDRELERLQASAKAISTLLRSWPGLLYLSMNDFR 240 (371)
T ss_pred HhHHHHHHHHHHHHhCCcchhhhhcCCccHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHhcCCceeeeecCCch
Confidence 33333333333332211 11112223344444443 222221 34556677777777655432100000001
Q ss_pred hHHHHHHhhCCCCHHHHHHHHHHHHhh
Q psy14014 328 ILPYVKDLVADPNQHVKSALASVIMGL 354 (615)
Q Consensus 328 l~p~l~~~~~d~~~~vR~~~~~~l~~l 354 (615)
.+..+...+.-+++.+|..+...+-.+
T Consensus 241 ~lksLv~~L~~p~~~ir~~Ildll~dl 267 (371)
T PF14664_consen 241 GLKSLVDSLRLPNPEIRKAILDLLFDL 267 (371)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 233344445556666666655554444
No 176
>PF10363 DUF2435: Protein of unknown function (DUF2435)
Probab=96.24 E-value=0.067 Score=40.69 Aligned_cols=69 Identities=19% Similarity=0.143 Sum_probs=49.7
Q ss_pred HHHHhhhcCCCchHHHHHHHHHHHHHhhhC-hhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhh
Q psy14014 509 PKVVAMSRDQNYLHRMTCLFCINVLAEACG-PTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILE 577 (615)
Q Consensus 509 ~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~-~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~ 577 (615)
...+..+.|+.+.+|..++..+..+.+..+ .....+.++..+...++|+|+-|-.+|+++|..++...+
T Consensus 6 ~~al~~L~dp~~PvRa~gL~~L~~Li~~~~~~~~~~~~il~l~l~~L~d~DsyVYL~aI~~L~~La~~~p 75 (92)
T PF10363_consen 6 QEALSDLNDPLPPVRAHGLVLLRKLIESKSEPVIDIPKILDLFLSQLKDEDSYVYLNAIKGLAALADRHP 75 (92)
T ss_pred HHHHHHccCCCcchHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHCh
Confidence 334455677778888888888888877665 333356677777778888888888888888888876654
No 177
>PF12530 DUF3730: Protein of unknown function (DUF3730) ; InterPro: IPR022542 This domain is found in eukaryotes, and is typically between 220 and 262 amino acids in length.
Probab=96.11 E-value=1.1 Score=41.29 Aligned_cols=194 Identities=15% Similarity=0.110 Sum_probs=109.7
Q ss_pred HhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHH--
Q psy14014 175 LCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQ-- 252 (615)
Q Consensus 175 l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~-- 252 (615)
+.+..++++....++.+..++.+-. ...+.++..+..+.+.+....+..+...+..+-+.-+. ..+.+-+.+..
T Consensus 9 l~~~~~~~~~~~~L~~L~~l~~~~~--~~~~~v~~~L~~L~~~~~~~~~~~~~rLl~~lw~~~~r--~f~~L~~~L~~~~ 84 (234)
T PF12530_consen 9 LGKISDPELQLPLLEALPSLACHKN--VCVPPVLQTLVSLVEQGSLELRYVALRLLTLLWKANDR--HFPFLQPLLLLLI 84 (234)
T ss_pred hcCCCChHHHHHHHHHHHHHhccCc--cchhHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhCch--HHHHHHHHHHHHH
Confidence 4556667777777777777665431 22344555555555555555555555555544332221 12333333322
Q ss_pred -------hcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhh-cCCcHHHHHHHHHHHHHHHhhccccchhHHH
Q psy14014 253 -------CSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLL-KDSEAEVRAAAANKVRDFCQNLDAYNQENII 324 (615)
Q Consensus 253 -------~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l-~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~ 324 (615)
.-.+..|....+.+.++..++...+. ...++++.+...+ ++.++.++..++.++..++..-.-+.. ..
T Consensus 85 ~r~~~~~~~~~~~~~~~i~~a~s~~~ic~~~p~--~g~~ll~~ls~~L~~~~~~~~~alale~l~~Lc~~~vvd~~--s~ 160 (234)
T PF12530_consen 85 LRIPSSFSSKDEFWECLISIAASIRDICCSRPD--HGVDLLPLLSGCLNQSCDEVAQALALEALAPLCEAEVVDFY--SA 160 (234)
T ss_pred hhcccccCCCcchHHHHHHHHHHHHHHHHhChh--hHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhccHH--HH
Confidence 12345688888888888888887665 3568889999999 788889999999999999864222211 11
Q ss_pred HHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhc-c---hhhhhhhHHHHHHhhcCCC
Q psy14014 325 MTYILPYVKDLVADPNQHVKSALASVIMGLSPILG-K---HNTVDHLLPLFLSQLKDEC 379 (615)
Q Consensus 325 ~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g-~---~~~~~~l~p~l~~~l~d~~ 379 (615)
+..+.|. +-.+..+.+-+..++.+.-+...-- . +.+...++..+.+.....+
T Consensus 161 w~vl~~~---l~~~~rp~v~~~l~~l~~l~~~~~~~~e~~~~~~~~~l~~lW~~~~~~~ 216 (234)
T PF12530_consen 161 WKVLQKK---LSLDYRPLVLKSLCSLFALVPQGAVDSEEYEELKRQILQLLWEYTSSSD 216 (234)
T ss_pred HHHHHHh---cCCccchHHHHHHHHHHHHhccccCChhhhhHHHHHHHHHHHhhccccc
Confidence 2223332 2345556665555555444332211 1 2234456666666666544
No 178
>PF11864 DUF3384: Domain of unknown function (DUF3384); InterPro: IPR024584 This entry represents the N-terminal domain of tuberin which is functionally uncharacterised.
Probab=96.08 E-value=2.1 Score=44.23 Aligned_cols=276 Identities=11% Similarity=0.043 Sum_probs=149.7
Q ss_pred HHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcH--HHHHHHHHHhccccCCCCC--cchhhhchHHHhhhhcCc
Q psy14014 27 VQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDED--EVLLALAEQLGTFTPNVGG--PEYVHCLLPPLESLATVE 102 (615)
Q Consensus 27 ~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~--~vr~~a~~~l~~l~~~~~~--~~~~~~l~~~l~~l~~~~ 102 (615)
...|..+++.|......+..+ ..+++.-....+++.+. +.|+++.+.|..+++.-.. ......++..+..--.++
T Consensus 4 l~~R~~a~~~l~~~i~~~~~~-~i~~iW~~~~DLi~~~~p~e~R~~~~~ll~~~i~~~~~~~~~~R~~fF~~I~~~~~~~ 82 (464)
T PF11864_consen 4 LSERIKAAEELCESIQKYPLS-SIEEIWYAAKDLIDPNQPSEARRAALELLIACIKRQDSSSGLMRAEFFRDISDPSNDD 82 (464)
T ss_pred HHHHHHHHHHHHHHHHhCCch-HHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHhcCCCch
Confidence 568999999999998877664 45556666677777654 5999999999888764322 111122333333333344
Q ss_pred hhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCC---------------cchh---------hhHHhhhhhh--
Q psy14014 103 ETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDW---------------FTSR---------TSACGLFSVC-- 156 (615)
Q Consensus 103 ~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~---------------~~~r---------~~a~~~l~~~-- 156 (615)
+-..|..|+.+|.+=++.+. .++..+.|.+......-. ...+ .....++..+
T Consensus 83 d~~~~l~aL~~LT~~Grdi~--~~~~~i~~~L~~wl~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~n 160 (464)
T PF11864_consen 83 DFDLRLEALIALTDNGRDID--FFEYEIGPFLLSWLEPSYQAARSARRKAKKSSSSKSKGLSNLDNEESNLSDLLQFLVN 160 (464)
T ss_pred hHHHHHHHHHHHHcCCcCch--hcccchHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccchhhhHHHHHHHHHH
Confidence 45677777777766555552 244444444443321100 0000 0011122211
Q ss_pred -----ccCCChhhHHHHHHHHHHHhCC-CChHHHHHHHHhHHHHHHH--hchhhhHhhhHHHHHHhhccCchhHHHHHHH
Q psy14014 157 -----YPRVTAGVKAELRSHFRNLCQD-DTPMVRRAAAGKLGELAKV--VEVDYLKTDIIPMFVNLAQDEQDSVRLLAVE 228 (615)
Q Consensus 157 -----~~~~~~~~~~~l~~~l~~l~~d-~~~~vR~~a~~~l~~l~~~--~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~ 228 (615)
...+.+.....++..+..+|.. .+...=+.++..+..+..+ +|.+ ....++..+....+- ......+-+
T Consensus 161 viKfn~~~l~e~~i~~lv~~i~~iC~~Ts~~~di~~~L~vldaii~y~~iP~~-sl~~~i~vLCsi~~~--~~l~~~~w~ 237 (464)
T PF11864_consen 161 VIKFNFNYLDEDEISSLVDQICTICKSTSSEDDIEACLSVLDAIITYGDIPSE-SLSPCIEVLCSIVNS--VSLCKPSWR 237 (464)
T ss_pred HHhcCCCCCCHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHcCcCChH-HHHHHHHHHhhHhcc--cccchhHHH
Confidence 2334556666677766666643 3333336778888877663 3322 223344444333222 255556666
Q ss_pred HHHHHHhhcChhhHHHhHHHHHHHhc--CC----CChHHHHHHHHHHHHHHHHhCccch----hh--hHHHHHHHhhcCC
Q psy14014 229 ACVSIASLLSQSDVEQLVMPTLRQCS--GD----TSWRVRYMVADKFTDLQKAVGPEIT----KT--DLVQAFQMLLKDS 296 (615)
Q Consensus 229 ~l~~l~~~~~~~~~~~~l~~~l~~~~--~d----~~~~vR~~~~~~l~~l~~~~~~~~~----~~--~l~~~l~~~l~d~ 296 (615)
++..++..-.. ...+..+...+ .| .+..+-++++..++.+....+.+.. .. -++|.|...++..
T Consensus 238 ~m~nL~~S~~g----~~~i~~L~~iL~~~~~~~~~~~~~lRGAv~~l~~ll~~~~~~~~~~l~~~~~~vl~sl~~al~~~ 313 (464)
T PF11864_consen 238 TMRNLLKSHLG----HSAIRTLCDILRSPDPQNKRDINVLRGAVFFLRMLLWGSGEQGYPSLPFSPSSVLPSLLNALKSN 313 (464)
T ss_pred HHHHHHcCccH----HHHHHHHHHHHcccCccccccHHHHhhHHHHHHHHHhccccCCcceecccHHHHHHHHHHHHhCC
Confidence 66666532211 22344455555 22 3456667888888887776643321 22 3888898888877
Q ss_pred cHHHHHHHHHHHHHHH
Q psy14014 297 EAEVRAAAANKVRDFC 312 (615)
Q Consensus 297 ~~~vr~~a~~~l~~~~ 312 (615)
++.|-...+..+..+.
T Consensus 314 ~~~v~~eIl~~i~~ll 329 (464)
T PF11864_consen 314 SPRVDYEILLLINRLL 329 (464)
T ss_pred CCeehHHHHHHHHHHH
Confidence 6655545555555544
No 179
>KOG0891|consensus
Probab=95.97 E-value=6 Score=48.47 Aligned_cols=510 Identities=18% Similarity=0.146 Sum_probs=232.2
Q ss_pred CcHHHHHHHHHHhccccCCCCC--------cchhhhchHHHhhh-hcCchhHHHHHHHHHHHHHHhhcChhHHhhhHHHH
Q psy14014 63 DEDEVLLALAEQLGTFTPNVGG--------PEYVHCLLPPLESL-ATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPL 133 (615)
Q Consensus 63 ~~~~vr~~a~~~l~~l~~~~~~--------~~~~~~l~~~l~~l-~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~ 133 (615)
+++++|..+...+-.+..+... .++...++..+..+ ..|.++.+|......+. +...+....+..+..
T Consensus 493 ~~~e~r~~~~l~~~~ll~~~~~~~~~~~~~~~~v~~vl~~ll~~aia~~~~~i~~~v~~~l~---~~~~~~laQ~~~lr~ 569 (2341)
T KOG0891|consen 493 DDSEIRKNAALTCCELLKYDIICSQTSPHALQVVKEVLSALLTVAIADTDPDIRIRVLSSLN---ERFDAQLAQPDLLRL 569 (2341)
T ss_pred ccHHHHHHHHHHHHHHHhhhhhhhcccchHHHHHHHHHHHHHHHhccCCCcchhhhHHhhhc---cchhhhhcCchhHHH
Confidence 3446888775444443332111 11233333333332 45677777776665554 222222222334444
Q ss_pred HHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHHHHH----hCCCChHHHHHHHHhHHHHHHHhc--hhhhHhhh
Q psy14014 134 VQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNL----CQDDTPMVRRAAAGKLGELAKVVE--VDYLKTDI 207 (615)
Q Consensus 134 l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~~l----~~d~~~~vR~~a~~~l~~l~~~~~--~~~~~~~l 207 (615)
.....++....++..+...++.++..-+....+.+....+.. ..+....+...++.-+........ -..+...+
T Consensus 570 ~~~al~~~~l~~~~~~~~~ig~l~~~~~a~vl~~lr~~~l~~~s~l~~sg~~r~~~~~a~~~~~~i~~~~~~i~~~v~~~ 649 (2341)
T KOG0891|consen 570 LFIALHDENFAIQELATVIIGRLSSYNPAYVLPSLRKTLLELLTELEFSGMARTKEESAKLLCELIISSPVLISPYVGPI 649 (2341)
T ss_pred HHHHhhhhhhhhHHhHHhhccccccccHHHHhHHHHHHHHHHhchhhhcchHHhHHHHHHHhhHHHHHHHHHHHhhcCch
Confidence 455556666777777777777665544333333333222222 223333333333333333322211 12234556
Q ss_pred HHHHHHhhccCchhHHHHHHHHHHHHHhhcChhh--HHHhHHHHHHHhcCCCC-hHHHHHHHHHHHHHHHHhCc----cc
Q psy14014 208 IPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSD--VEQLVMPTLRQCSGDTS-WRVRYMVADKFTDLQKAVGP----EI 280 (615)
Q Consensus 208 l~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~--~~~~l~~~l~~~~~d~~-~~vR~~~~~~l~~l~~~~~~----~~ 280 (615)
+-.+...+.|.+..+-+.+..+++.++...+.+. ....+++.+.+.+.|.+ ..-|.++.++++.+...-+- ..
T Consensus 650 l~~~~~~~~~~~s~~~~~~~~~~~eL~~v~g~~~~~~~~~~~~~~~~~l~~~s~~~rr~aslk~l~~l~s~~~~~v~p~~ 729 (2341)
T KOG0891|consen 650 LLVLLPKLQDPSSGVEKAVLETIGELCAVGGEEMVKWVDELFSLIIKMLQDQSSLGKRLAALKALGQLESSTGYVVDPYL 729 (2341)
T ss_pred HHHHHHHHhccchhhHHHHHHHHHHHHHhccchhhhccchHHHHHHHHHHHhhhhhchhHHHHHhhhhhcccceEecccc
Confidence 6666777788888888999999999998888432 22345666655555543 45677788888888765432 22
Q ss_pred hhhhHHHHHHHhhcC-CcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCH--HH---HHHH-------
Q psy14014 281 TKTDLVQAFQMLLKD-SEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQ--HV---KSAL------- 347 (615)
Q Consensus 281 ~~~~l~~~l~~~l~d-~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~--~v---R~~~------- 347 (615)
..+.++..+...++. ....+|.++++.++..... .+.......... .+........+ .. ....
T Consensus 730 ~~P~ll~~l~~~~~te~~~~ir~~~v~~~g~~g~~-d~~~~~~~~~~~---~~~~~~~~~k~~~~~~~~~~~~~~~~~e~ 805 (2341)
T KOG0891|consen 730 DYPELLDILINILKTEQSSTIRREAIRLLGLLGAL-DPYKHKVTEGTS---ASKISSEQIKSDIDISLLESGVNPSNDEY 805 (2341)
T ss_pred cChHHHHHHHHHHhHhhhhHHHHHHHHHhhhhccc-chhHHHHHhhhh---hHhhhhccccccchHHHHHhhhhhhhhhh
Confidence 234566655554443 3456788888777744332 221110000000 00000010011 00 0000
Q ss_pred --HHHHHhhchhhcchhhhhh-------hHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhc
Q psy14014 348 --ASVIMGLSPILGKHNTVDH-------LLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQ 418 (615)
Q Consensus 348 --~~~l~~l~~~~g~~~~~~~-------l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~ 418 (615)
...+..+...........+ .+|.+.. +..+...-+..++..+.......+.. ......+-...+...
T Consensus 806 ~p~v~I~~l~~~l~d~~~~~~l~~~~~a~~~i~~~-~~~~~~l~l~qv~~~~~~~~r~~~~~---~~~f~~~q~~~~~~~ 881 (2341)
T KOG0891|consen 806 YPAVTIHALMGILKDPSLSIHHTAVAQAIMHIFQS-LGLKCVLFLDQVIPTLIDVMRSCPPN---LREFYFQQLTSLVAI 881 (2341)
T ss_pred hhHHHHHHHhhhhhhhhhHHHHHHhhhchhHHHHh-hccchhhhHHHHHHHHHHHHHhcCcc---hhHHHHHhhhhhhhc
Confidence 0001111000000000001 1111111 11111222222222222111111100 000000000000000
Q ss_pred cccchhhhhhhhHHHHHhhhcCCc---hHHHHHHHHhHHHHhhhChHhH--HHHHHHHHHHhcCCcchHHHHHHHHHHHH
Q psy14014 419 LGVEFFDEKLNALSIVELAEDSKW---RVRLAIIEYMPLLAGQLGVEFF--DEKLNALCMTWLVDHVYAIREAATLNLKK 493 (615)
Q Consensus 419 ~~~~~~~~~l~~~~i~~~~~~~~~---~vr~~~~~~l~~l~~~~~~~~~--~~~l~~~l~~~l~d~~~~vR~~a~~~l~~ 493 (615)
.... ... +. +.+.....+.+| .+.......+..+...++.++. .+...+..+..+.......|.........
T Consensus 882 ~~~h-~~~-~~-~~i~~~i~~~~~~~~~l~~~~~~l~~~i~~~l~~~f~~~l~~~~~~~l~~~~~~~s~~~~~~~~~~~~ 958 (2341)
T KOG0891|consen 882 VRQH-IRP-YM-ESIFTLIKDFWPPDTSLQITIISLIEDIAVALGGEFKKYLPELLPTMLTVLQHDKSKDRVVSRKVLQS 958 (2341)
T ss_pred cchh-Hhh-hh-hhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhHHHHhhhhhccchheeecccccchHHHHHHhhHH
Confidence 0000 000 00 122223332222 2223334445555555555432 22233322222222222233333333333
Q ss_pred HHHHhCh--HHhhhchhHHHHhhhcCC--CchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHH
Q psy14014 494 LVEQFGS--EWAQSTVIPKVVAMSRDQ--NYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTL 569 (615)
Q Consensus 494 l~~~~~~--~~~~~~i~~~l~~~~~d~--~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l 569 (615)
+.. +|. +....-+.|.+.+++.+. ....|..+..+.+.++...........+...+.+.+.-. ++++...+..+
T Consensus 959 ~~~-~~~~~~~~~hl~~~~~vkl~~~~~~~~~~~~~~l~t~~~l~~~~~~~~~~s~i~~~~~r~l~~s-~el~~~~~~~l 1036 (2341)
T KOG0891|consen 959 LQK-FGSNLEQYLHLLLPPIVKLFEDPTVPLSIRKSALITIGRLAQQVDLSEYASRIIHPLVRVLSSS-PELRDVIMDTL 1036 (2341)
T ss_pred HHh-cCccHHhhHhhhccHHHHHHhhhhhhHHHHhhHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccc-hhHHHHHHHHH
Confidence 322 232 223345778888888887 677899999999999988777666666666667766666 99999999999
Q ss_pred HHHhHhhhhhhHHhhHHHHHh
Q psy14014 570 QKIGPILETNVIQSQVKPALD 590 (615)
Q Consensus 570 ~~l~~~~~~~~~~~~~~~~l~ 590 (615)
..+....+... ..+.|++.
T Consensus 1037 ~~l~~~~~~~~--~i~~p~~~ 1055 (2341)
T KOG0891|consen 1037 IALVKQLGKDF--AIFIPMVN 1055 (2341)
T ss_pred HHHHHhhcCce--eehHHHHH
Confidence 99887766432 34566655
No 180
>PF13251 DUF4042: Domain of unknown function (DUF4042)
Probab=95.95 E-value=0.13 Score=44.74 Aligned_cols=60 Identities=13% Similarity=0.128 Sum_probs=42.2
Q ss_pred CCCCCchHHHHHHHHHHHHhHhhh----hhhHHhhHHHHHhhhcCCCCccHHHHHHHHHHHHhh
Q psy14014 554 AGDNVANVRFNVAKTLQKIGPILE----TNVIQSQVKPALDKLNGDTDVDVKYFAQEAISSIAD 613 (615)
Q Consensus 554 ~~D~~~~vr~~a~~~l~~l~~~~~----~~~~~~~~~~~l~~l~~d~d~~v~~~a~~a~~~~~~ 613 (615)
..+.+..+-....++++.+++..+ +..+...+..-+..+..+.|.+|+-.+..+++.+.+
T Consensus 111 ~~E~~~~~l~q~lK~la~Lv~~tPY~rL~~~ll~~~v~~v~~~l~~~d~~v~v~~l~~~~~l~s 174 (182)
T PF13251_consen 111 QAEKSPPVLTQLLKCLAVLVQATPYHRLPPGLLTEVVTQVRPLLRHRDPNVRVAALSCLGALLS 174 (182)
T ss_pred hcccccHHHHHHHHHHHHHHccCChhhcCHhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHc
Confidence 356677777788888888886654 233444455555556677999999999888887654
No 181
>KOG2213|consensus
Probab=95.91 E-value=1.8 Score=41.82 Aligned_cols=53 Identities=15% Similarity=0.246 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhh
Q psy14014 260 RVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQN 314 (615)
Q Consensus 260 ~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~ 314 (615)
.-++-+.+.++++..+++.- .+..+..-.+++.|.+..||..|++.|+.||+.
T Consensus 39 k~k~lasq~ip~~fk~fp~l--a~~a~da~~d~~ed~d~~ir~qaik~lp~fc~~ 91 (460)
T KOG2213|consen 39 KEKRLASQFIPRFFKHFPSL--ADEAIDAQLDLCEDDDVGIRRQAIKGLPLFCKG 91 (460)
T ss_pred HHHHHHHHHHHHHHhhCchh--hhHHHHhhhccccccchhhHHHHHhccchhccC
Confidence 45667777777777776643 356777778888888889999999999888874
No 182
>KOG2160|consensus
Probab=95.90 E-value=0.53 Score=44.96 Aligned_cols=169 Identities=12% Similarity=0.091 Sum_probs=105.7
Q ss_pred CCchHHHHHHHHhHHHHhhhCh--HhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChH--H-hhhchhHHHHhh
Q psy14014 440 SKWRVRLAIIEYMPLLAGQLGV--EFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSE--W-AQSTVIPKVVAM 514 (615)
Q Consensus 440 ~~~~vr~~~~~~l~~l~~~~~~--~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~--~-~~~~i~~~l~~~ 514 (615)
.+..-|..+++.+..+++.+.. ++..-..++.+...+++++..+|+.|+..++..+.+-... . .....++.|+..
T Consensus 95 ~~le~ke~ald~Le~lve~iDnAndl~~~ggl~~ll~~l~~~~~~lR~~Aa~Vigt~~qNNP~~Qe~v~E~~~L~~Ll~~ 174 (342)
T KOG2160|consen 95 VDLEDKEDALDNLEELVEDIDNANDLISLGGLVPLLGYLENSDAELRELAARVIGTAVQNNPKSQEQVIELGALSKLLKI 174 (342)
T ss_pred CCHHHHHHHHHHHHHHHHhhhhHHhHhhccCHHHHHHHhcCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHcccHHHHHHH
Confidence 3455677788888888776643 2222334455666999999999999999999999864321 1 112366777775
Q ss_pred hc-CCCchHHHHHHHHHHHHHhhhChh--hH-HHhhHHHHHhhCCC--CCchHHHHHHHHHHHHhHhhhh--hhH-HhhH
Q psy14014 515 SR-DQNYLHRMTCLFCINVLAEACGPT--VT-ANFLLPTVLNMAGD--NVANVRFNVAKTLQKIGPILET--NVI-QSQV 585 (615)
Q Consensus 515 ~~-d~~~~~R~~a~~~l~~l~~~~~~~--~~-~~~i~~~l~~~~~D--~~~~vr~~a~~~l~~l~~~~~~--~~~-~~~~ 585 (615)
+. +.+-.+|..++.+++.+.....+. .| .-.-...|...+++ .+...+..+...+..+.+.... +.. ...+
T Consensus 175 ls~~~~~~~r~kaL~AissLIRn~~~g~~~fl~~~G~~~L~~vl~~~~~~~~lkrK~~~Ll~~Ll~~~~s~~d~~~~~~f 254 (342)
T KOG2160|consen 175 LSSDDPNTVRTKALFAISSLIRNNKPGQDEFLKLNGYQVLRDVLQSNNTSVKLKRKALFLLSLLLQEDKSDEDIASSLGF 254 (342)
T ss_pred HccCCCchHHHHHHHHHHHHHhcCcHHHHHHHhcCCHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhhhhhhhHHHHhhh
Confidence 54 455667899999999999875543 22 22234555666666 4455555667777777654321 111 1223
Q ss_pred HHHHhhhcCCCCccHHHHHHHHH
Q psy14014 586 KPALDKLNGDTDVDVKYFAQEAI 608 (615)
Q Consensus 586 ~~~l~~l~~d~d~~v~~~a~~a~ 608 (615)
...+..+....+.+++++|..++
T Consensus 255 ~~~~~~l~~~l~~~~~e~~l~~~ 277 (342)
T KOG2160|consen 255 QRVLENLISSLDFEVNEAALTAL 277 (342)
T ss_pred hHHHHHHhhccchhhhHHHHHHH
Confidence 33444455556777777777654
No 183
>PF11865 DUF3385: Domain of unknown function (DUF3385); InterPro: IPR024585 This uncharacterised domain is is typically between 160 to 172 amino acids in length. It is found in the phosphatidylinositol kinase-related protein kinases TOR (target of rapamycin). In Saccharomyces cerevisiae the TOR proteins, TOR1 and TOR2, regulate growth in a rapamycin-sensitive manner [].
Probab=95.79 E-value=0.092 Score=45.03 Aligned_cols=141 Identities=16% Similarity=0.141 Sum_probs=80.7
Q ss_pred HHhHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhh-----cCCcHHHHHHHHHHHHHHHhhcc
Q psy14014 243 EQLVMPTLRQCSG-DTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLL-----KDSEAEVRAAAANKVRDFCQNLD 316 (615)
Q Consensus 243 ~~~l~~~l~~~~~-d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l-----~d~~~~vr~~a~~~l~~~~~~~~ 316 (615)
.+.+++.+.++++ +.+|.+|+.+++++|.++..=+ .......... .+.+........ ......
T Consensus 8 yP~LL~~L~~iLk~e~s~~iR~E~lr~lGilGALDP------~~~k~~~~~~~~~~~~~~~~~~~~~~l-----~~~~~~ 76 (160)
T PF11865_consen 8 YPELLDILLNILKTEQSQSIRREALRVLGILGALDP------YKHKSIQKSLDSKSSENSNDESTDISL-----PMMGIS 76 (160)
T ss_pred hHHHHHHHHHHHHhCCCHHHHHHHHHHhhhccccCc------HHHhcccccCCccccccccccchhhHH-----hhccCC
Confidence 4567777777664 3468888888888888764210 0000000000 011111111111 111111
Q ss_pred ccchhHHHHHhhHHHHHHhhCCCCHHH-HHHHHHHHHhhchhhcc--hhhhhhhHHHHHHhhcCCChhHHHHHHHhhhHh
Q psy14014 317 AYNQENIIMTYILPYVKDLVADPNQHV-KSALASVIMGLSPILGK--HNTVDHLLPLFLSQLKDECPEVRLNIISNLDCV 393 (615)
Q Consensus 317 ~~~~~~~~~~~l~p~l~~~~~d~~~~v-R~~~~~~l~~l~~~~g~--~~~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l 393 (615)
+ ..++.+....+..+...++|++-.. +.+++.++..+.+..|. -.+.++++|.+...++..++..|+..+..|+.+
T Consensus 77 ~-~~ee~y~~vvi~~L~~iL~D~sLs~~h~~vv~ai~~If~~l~~~cv~~L~~viP~~l~~i~~~~~~~~e~~~~qL~~l 155 (160)
T PF11865_consen 77 P-SSEEYYPTVVINALMRILRDPSLSSHHTAVVQAIMYIFKSLGLKCVPYLPQVIPIFLRVIRTCPDSLREFYFQQLADL 155 (160)
T ss_pred C-chHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhcCcCchhHHHHHhHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 1 1223455566777777888876533 44577777777766664 446778999999999977778888888777766
Q ss_pred hh
Q psy14014 394 NE 395 (615)
Q Consensus 394 ~~ 395 (615)
+.
T Consensus 156 v~ 157 (160)
T PF11865_consen 156 VS 157 (160)
T ss_pred HH
Confidence 54
No 184
>COG5098 Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics / Cell division and chromosome partitioning]
Probab=95.73 E-value=0.66 Score=47.99 Aligned_cols=142 Identities=18% Similarity=0.100 Sum_probs=99.0
Q ss_pred HHHHHHHHHHhcCC----cchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhh-cCCCchHHHHHHHHHHHHHhhhCh
Q psy14014 465 DEKLNALCMTWLVD----HVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMS-RDQNYLHRMTCLFCINVLAEACGP 539 (615)
Q Consensus 465 ~~~l~~~l~~~l~d----~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~-~d~~~~~R~~a~~~l~~l~~~~~~ 539 (615)
...+-|.+...... .+..+..+|.-++..+-.. +.+ +...-+|.+...+ +.++|.+|.+++-++|.+.-++.
T Consensus 890 Ls~F~pvVeE~csn~~~~sd~~lq~aA~l~L~klMCl-S~~-fc~ehlpllIt~mek~p~P~IR~NaVvglgD~~vcfN- 966 (1128)
T COG5098 890 LSNFKPVVEEGCSNSSRFSDEELQVAAYLSLYKLMCL-SFE-FCSEHLPLLITSMEKHPIPRIRANAVVGLGDFLVCFN- 966 (1128)
T ss_pred HhhhhHHHHHHhccccccCCHHHHHHHHHHHHHHHHH-hHH-HHHHHHHHHHHHHhhCCCcceeccceeeccccceehh-
Confidence 34455655555443 5778888888888877542 333 3344678888754 58999999999999999875443
Q ss_pred hhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHHHHhhhcCCCCccHHHHHHHHHHHHh
Q psy14014 540 TVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKLNGDTDVDVKYFAQEAISSIA 612 (615)
Q Consensus 540 ~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~l~~d~d~~v~~~a~~a~~~~~ 612 (615)
.+.+.....|.+.+.|.+..||.++..++..++-.- .-....+ .+.+..++.|+|..+...|.--+-.+|
T Consensus 967 -~~~de~t~yLyrrL~De~~~V~rtclmti~fLilag-q~KVKGq-lg~ma~~L~deda~Isdmar~fft~~a 1036 (1128)
T COG5098 967 -TTADEHTHYLYRRLGDEDADVRRTCLMTIHFLILAG-QLKVKGQ-LGKMALLLTDEDAEISDMARHFFTQIA 1036 (1128)
T ss_pred -hhhHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHcc-ceeeccc-hhhhHhhccCCcchHHHHHHHHHHHHH
Confidence 244567788889999999999999999998876321 1111112 344555669999999999987776655
No 185
>PF10274 ParcG: Parkin co-regulated protein; InterPro: IPR019399 This family of proteins is transcribed anti-sense along the DNA to the Parkin gene product and the two appear to be transcribed under the same promoter. The protein has predicted alpha-helical and beta-sheet domains which suggest its function is in the ubiquitin/proteasome system []. Mutations in parkin are the genetic cause of early-onset and autosomal recessive juvenile parkinsonism.
Probab=95.72 E-value=0.24 Score=42.88 Aligned_cols=93 Identities=16% Similarity=0.186 Sum_probs=70.4
Q ss_pred hhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhh---chh
Q psy14014 281 TKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGL---SPI 357 (615)
Q Consensus 281 ~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l---~~~ 357 (615)
..+..+|.+.+.+.+.+..-|--|.+.+..++.. ....+--.+++++++.+...++..++.|...++.+|..+ ...
T Consensus 35 dy~~~Lpif~dGL~Et~~Py~flA~~g~~dll~~-~~~~kilPvlPqLI~plk~AL~tr~~~V~~~~L~~Lq~Lv~~~~~ 113 (183)
T PF10274_consen 35 DYHHYLPIFFDGLRETEHPYRFLARQGIKDLLER-GGGEKILPVLPQLIIPLKRALNTRDPEVFCATLKALQQLVTSSDM 113 (183)
T ss_pred chhhHHHHHHhhhhccCccHHHHHHHHHHHHHHh-cchhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhh
Confidence 3468999999999988878888888898888887 222222345777888888899999999999999999999 666
Q ss_pred hcch--hhhhhhHHHHHHh
Q psy14014 358 LGKH--NTVDHLLPLFLSQ 374 (615)
Q Consensus 358 ~g~~--~~~~~l~p~l~~~ 374 (615)
+|.. .+..+++|.+.-+
T Consensus 114 vG~aLvPyyrqLLp~ln~f 132 (183)
T PF10274_consen 114 VGEALVPYYRQLLPVLNLF 132 (183)
T ss_pred hhHHHHHHHHHHHHHHHHH
Confidence 7753 2345666666533
No 186
>PF14664 RICTOR_N: Rapamycin-insensitive companion of mTOR, N-term
Probab=95.71 E-value=1.7 Score=43.16 Aligned_cols=226 Identities=12% Similarity=0.069 Sum_probs=132.4
Q ss_pred hhhchHHHhhhhcCchhHHHHHHHHHHHHHHhhcCh-hHHhhhHHHHH--HHhhcCC-CcchhhhHHhhhhhhccC--CC
Q psy14014 88 VHCLLPPLESLATVEETVVRDKAVESLRLISAQHSP-HDLEAHFVPLV--QRLASGD-WFTSRTSACGLFSVCYPR--VT 161 (615)
Q Consensus 88 ~~~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~-~~~~~~~l~~l--~~l~~~~-~~~~r~~a~~~l~~~~~~--~~ 161 (615)
+..+.+.+..++-+++.+||.++..+++.+...-.. ..+...=++.+ ..+..+. ....|..|.+++..+... -.
T Consensus 23 ~~~~~~~i~~~lL~~~~~vraa~yRilRy~i~d~~~l~~~~~l~id~~ii~SL~~~~~~~~ER~QALkliR~~l~~~~~~ 102 (371)
T PF14664_consen 23 LSFFGERIQCMLLSDSKEVRAAGYRILRYLISDEESLQILLKLHIDIFIIRSLDRDNKNDVEREQALKLIRAFLEIKKGP 102 (371)
T ss_pred HHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHcCHHHHHHHHHcCCchhhHhhhcccCCChHHHHHHHHHHHHHHHhcCCc
Confidence 334444444433344499999999988887654322 11122112222 2344443 445788999999888766 33
Q ss_pred hhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcCh--
Q psy14014 162 AGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQ-- 239 (615)
Q Consensus 162 ~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~-- 239 (615)
......+...+..+.++++...|..|.+.+.+++-.-+.-.....-+..+...+.|+..++-...+.++-.+...-..
T Consensus 103 ~~~~~~vvralvaiae~~~D~lr~~cletL~El~l~~P~lv~~~gG~~~L~~~l~d~~~~~~~~l~~~lL~lLd~p~tR~ 182 (371)
T PF14664_consen 103 KEIPRGVVRALVAIAEHEDDRLRRICLETLCELALLNPELVAECGGIRVLLRALIDGSFSISESLLDTLLYLLDSPRTRK 182 (371)
T ss_pred ccCCHHHHHHHHHHHhCCchHHHHHHHHHHHHHHhhCHHHHHHcCCHHHHHHHHHhccHhHHHHHHHHHHHHhCCcchhh
Confidence 455667888888999999999999999999999876665444556667777777776555555555554444332211
Q ss_pred ----hhHHHhHHHHHHHh----cCCCCh-HHHHHHHHHHHHHHHHhCccc----hhhhHHHHHHHhhcCCcHHHHHHHHH
Q psy14014 240 ----SDVEQLVMPTLRQC----SGDTSW-RVRYMVADKFTDLQKAVGPEI----TKTDLVQAFQMLLKDSEAEVRAAAAN 306 (615)
Q Consensus 240 ----~~~~~~l~~~l~~~----~~d~~~-~vR~~~~~~l~~l~~~~~~~~----~~~~l~~~l~~~l~d~~~~vr~~a~~ 306 (615)
......++-.+.+. .++... ..-.++..++..+.+.+..-. .....+..++..+.-+.+++|...+.
T Consensus 183 yl~~~~dL~~l~apftd~~~~~~~~~~~~~~l~~s~~ai~~~LrsW~GLl~l~~~~~~~lksLv~~L~~p~~~ir~~Ild 262 (371)
T PF14664_consen 183 YLRPGFDLESLLAPFTDFHYRKIKDDRELERLQASAKAISTLLRSWPGLLYLSMNDFRGLKSLVDSLRLPNPEIRKAILD 262 (371)
T ss_pred hhcCCccHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHhcCCceeeeecCCchHHHHHHHHHcCCCHHHHHHHHH
Confidence 11122233333333 222221 233344455555554432211 01145666778888888889987777
Q ss_pred HHHHHHh
Q psy14014 307 KVRDFCQ 313 (615)
Q Consensus 307 ~l~~~~~ 313 (615)
.+-.+..
T Consensus 263 ll~dllr 269 (371)
T PF14664_consen 263 LLFDLLR 269 (371)
T ss_pred HHHHHHC
Confidence 7666554
No 187
>PF11865 DUF3385: Domain of unknown function (DUF3385); InterPro: IPR024585 This uncharacterised domain is is typically between 160 to 172 amino acids in length. It is found in the phosphatidylinositol kinase-related protein kinases TOR (target of rapamycin). In Saccharomyces cerevisiae the TOR proteins, TOR1 and TOR2, regulate growth in a rapamycin-sensitive manner [].
Probab=95.69 E-value=0.086 Score=45.21 Aligned_cols=72 Identities=11% Similarity=0.173 Sum_probs=51.2
Q ss_pred hhHHHHHHHhhcCCc-HHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhch
Q psy14014 283 TDLVQAFQMLLKDSE-AEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSP 356 (615)
Q Consensus 283 ~~l~~~l~~~l~d~~-~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~ 356 (615)
.-.+..+.+.++|+. ..-+..+++++..+.+..+..+ -.++++++|.+...++..+...|......++.+..
T Consensus 85 ~vvi~~L~~iL~D~sLs~~h~~vv~ai~~If~~l~~~c--v~~L~~viP~~l~~i~~~~~~~~e~~~~qL~~lv~ 157 (160)
T PF11865_consen 85 TVVINALMRILRDPSLSSHHTAVVQAIMYIFKSLGLKC--VPYLPQVIPIFLRVIRTCPDSLREFYFQQLADLVS 157 (160)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhcCcCc--hhHHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 345566777777765 3345567777777776655544 25788999999998887777888888777776654
No 188
>KOG2160|consensus
Probab=95.65 E-value=1.6 Score=41.85 Aligned_cols=143 Identities=16% Similarity=0.142 Sum_probs=91.3
Q ss_pred HHHhCCCChHHHHHHHHhHHHHHHHhchh---hhHhhhHHHHHHhh-ccCchhHHHHHHHHHHHHHhhcChhh--HHH-h
Q psy14014 173 RNLCQDDTPMVRRAAAGKLGELAKVVEVD---YLKTDIIPMFVNLA-QDEQDSVRLLAVEACVSIASLLSQSD--VEQ-L 245 (615)
Q Consensus 173 ~~l~~d~~~~vR~~a~~~l~~l~~~~~~~---~~~~~ll~~l~~~~-~d~~~~vr~~a~~~l~~l~~~~~~~~--~~~-~ 245 (615)
..++++.+..+|..|+..++..++.-++- ......++.+...+ .|....+|..|+.++..+.+...+-. +.. .
T Consensus 130 l~~l~~~~~~lR~~Aa~Vigt~~qNNP~~Qe~v~E~~~L~~Ll~~ls~~~~~~~r~kaL~AissLIRn~~~g~~~fl~~~ 209 (342)
T KOG2160|consen 130 LGYLENSDAELRELAARVIGTAVQNNPKSQEQVIELGALSKLLKILSSDDPNTVRTKALFAISSLIRNNKPGQDEFLKLN 209 (342)
T ss_pred HHHhcCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHcccHHHHHHHHccCCCchHHHHHHHHHHHHHhcCcHHHHHHHhcC
Confidence 33778999999999999999998876652 22233454444444 56777899999999999988876531 111 1
Q ss_pred HHHHHHHhcCC--CChHHHHHHHHHHHHHHHHhCcc--chhhhHHH-HHHHhhcCCcHHHHHHHHHHHHHHHhhc
Q psy14014 246 VMPTLRQCSGD--TSWRVRYMVADKFTDLQKAVGPE--ITKTDLVQ-AFQMLLKDSEAEVRAAAANKVRDFCQNL 315 (615)
Q Consensus 246 l~~~l~~~~~d--~~~~vR~~~~~~l~~l~~~~~~~--~~~~~l~~-~l~~~l~d~~~~vr~~a~~~l~~~~~~~ 315 (615)
-...+...+++ .+.+.++.++..++.+...-..+ .......+ .+..+....+.++++.++.++-.....+
T Consensus 210 G~~~L~~vl~~~~~~~~lkrK~~~Ll~~Ll~~~~s~~d~~~~~~f~~~~~~l~~~l~~~~~e~~l~~~l~~l~~~ 284 (342)
T KOG2160|consen 210 GYQVLRDVLQSNNTSVKLKRKALFLLSLLLQEDKSDEDIASSLGFQRVLENLISSLDFEVNEAALTALLSLLSEL 284 (342)
T ss_pred CHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhHHHHHHhhccchhhhHHHHHHHHHHHHHH
Confidence 24455566665 56778888888888776543221 11122222 3344555566778888877776665544
No 189
>PF10274 ParcG: Parkin co-regulated protein; InterPro: IPR019399 This family of proteins is transcribed anti-sense along the DNA to the Parkin gene product and the two appear to be transcribed under the same promoter. The protein has predicted alpha-helical and beta-sheet domains which suggest its function is in the ubiquitin/proteasome system []. Mutations in parkin are the genetic cause of early-onset and autosomal recessive juvenile parkinsonism.
Probab=95.61 E-value=0.27 Score=42.53 Aligned_cols=69 Identities=16% Similarity=0.058 Sum_probs=45.2
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhh---hchhHHHHhhhcCCCchHHHHHHHHHHHH
Q psy14014 465 DEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQ---STVIPKVVAMSRDQNYLHRMTCLFCINVL 533 (615)
Q Consensus 465 ~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~---~~i~~~l~~~~~d~~~~~R~~a~~~l~~l 533 (615)
.+.++|.+++.+......-|-.|...+..+...-+.+... ..+++.+.+.++.+++.+...++.++..+
T Consensus 36 y~~~Lpif~dGL~Et~~Py~flA~~g~~dll~~~~~~kilPvlPqLI~plk~AL~tr~~~V~~~~L~~Lq~L 107 (183)
T PF10274_consen 36 YHHYLPIFFDGLRETEHPYRFLARQGIKDLLERGGGEKILPVLPQLIIPLKRALNTRDPEVFCATLKALQQL 107 (183)
T ss_pred hhhHHHHHHhhhhccCccHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 4567777777777777777777777777777763322221 33444555667777777777777777777
No 190
>KOG2021|consensus
Probab=95.55 E-value=3.9 Score=43.16 Aligned_cols=239 Identities=15% Similarity=0.117 Sum_probs=123.8
Q ss_pred CCCCHHHHHHHHHHHHhhchhhcchh------------hhhhhHHHHHH--hhcCCChhHHHHHHHhhhHhhhhhchhHH
Q psy14014 337 ADPNQHVKSALASVIMGLSPILGKHN------------TVDHLLPLFLS--QLKDECPEVRLNIISNLDCVNEVIGIQQW 402 (615)
Q Consensus 337 ~d~~~~vR~~~~~~l~~l~~~~g~~~------------~~~~l~p~l~~--~l~d~~~~vr~~a~~~l~~l~~~~~~~~~ 402 (615)
...+|..-..++..+..+++...... ....+++.+.. ....+++.|..-..+.+.+....+..+.
T Consensus 450 ~e~swqevE~Aiylly~lgE~l~~~~~~~nsgd~s~~~vl~~~~~ll~tsqv~~h~h~lVqLlfmE~ivRY~kff~~es- 528 (980)
T KOG2021|consen 450 KEESWQEVELAIYLLYNLGECLKNNYFGLNSGDISTSQVLFLNELLLMTSQVLAHDHELVQLLFMELIVRYNKFFSTES- 528 (980)
T ss_pred CcchHHHHHHHHHHHHHHhhccccccccccCccccHHHHHHHHHHHHHHcccccCCchHHHHHHHHHHHHHHHHHhcch-
Confidence 45678888888888888887653221 11133333332 3445667777777777666555543321
Q ss_pred HHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHHHHhHHHHhhhChHh--HHHHHHHHHHHhcCCc-
Q psy14014 403 RVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEF--FDEKLNALCMTWLVDH- 479 (615)
Q Consensus 403 ~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l~d~- 479 (615)
+++|.+.+.+ .=...+++.+.+||..+.-.+.++.+.+.+.. +-+.++..+-++|..+
T Consensus 529 -------q~ip~vL~aF------------ld~rglhn~ne~Vr~RawYLF~RfVKlLkkqlvpfie~iln~iqdlL~~~v 589 (980)
T KOG2021|consen 529 -------QKIPLVLNAF------------LDSRGLHNKNENVRLRAWYLFTRFVKLLKKQLVPFIEEILNKIQDLLHIKV 589 (980)
T ss_pred -------hhhHHHHHHH------------ccchhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcC
Confidence 1233221100 00134567888899888888888877665532 2234444444444111
Q ss_pred ---c--------hHHHHHHHHHHHHHHHH--hChHH---hh----------hchhHHHHhhhcCCCchHHH----HHHHH
Q psy14014 480 ---V--------YAIREAATLNLKKLVEQ--FGSEW---AQ----------STVIPKVVAMSRDQNYLHRM----TCLFC 529 (615)
Q Consensus 480 ---~--------~~vR~~a~~~l~~l~~~--~~~~~---~~----------~~i~~~l~~~~~d~~~~~R~----~a~~~ 529 (615)
+ .+-...-.+++|.+... ..++. +. ..+.+.-..+..|.+..+.. .++.+
T Consensus 590 tt~N~~s~~lt~fddqlyIfEtiGviI~l~n~paE~qaay~~~litpl~~~~~igl~~a~lasde~~pv~Ia~c~~~lma 669 (980)
T KOG2021|consen 590 TTINAQSDNLTIFDDQLYIFETIGVIITLNNSPAELQAAYANTLITPLILDQIIGLLFAQLASDEASPVVIAECHHILMA 669 (980)
T ss_pred CCcCccccccccccccceeeecceEEEeCCCCCHHHHHHHHhcccChHHHHHHHHHHHHHHhccccccHHHHHHHHHHHH
Confidence 1 11111112222322211 01110 00 11222222344566555543 45567
Q ss_pred HHHHHhhhChhh-----------H---HHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHHHHhhhcCC
Q psy14014 530 INVLAEACGPTV-----------T---ANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKLNGD 595 (615)
Q Consensus 530 l~~l~~~~~~~~-----------~---~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~l~~d 595 (615)
+|.+++.....- | .+.+++.+.. --...++|.++-..+.+++...+++.+ +.+..+++.+++|
T Consensus 670 ig~lakgf~~rlvt~~qvg~~~vf~~~ldvil~~ls~--f~k~E~iRsavrft~hRmI~~lg~~vl-Pfipklie~lL~s 746 (980)
T KOG2021|consen 670 IGTLAKGFHIRLVTENQVGNMVVFSNILDVILVTLSF--FNKFENIRSAVRFTFHRMIPILGNKVL-PFIPKLIELLLSS 746 (980)
T ss_pred HHHHhhcccccCcchhcccHHHHHHHHHHHHHHHHhh--ccccchhHHHHHHHHHHHHHhcchhhh-cchHHHHHHHHhc
Confidence 888876532211 1 1233444333 245678999999999999998886553 6677777777666
Q ss_pred CCc
Q psy14014 596 TDV 598 (615)
Q Consensus 596 ~d~ 598 (615)
-|.
T Consensus 747 ~d~ 749 (980)
T KOG2021|consen 747 TDL 749 (980)
T ss_pred CCH
Confidence 654
No 191
>COG5098 Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics / Cell division and chromosome partitioning]
Probab=95.54 E-value=3.7 Score=42.85 Aligned_cols=146 Identities=18% Similarity=0.140 Sum_probs=102.3
Q ss_pred CchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCC
Q psy14014 441 KWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLV-DHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQN 519 (615)
Q Consensus 441 ~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~-d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~ 519 (615)
+..+..+|.-.+..+. .+..+++ ..=+|.+...+. ++++.+|..|+..+|.+.--++. +.+..-..|..-+.|.+
T Consensus 909 d~~lq~aA~l~L~klM-ClS~~fc-~ehlpllIt~mek~p~P~IR~NaVvglgD~~vcfN~--~~de~t~yLyrrL~De~ 984 (1128)
T COG5098 909 DEELQVAAYLSLYKLM-CLSFEFC-SEHLPLLITSMEKHPIPRIRANAVVGLGDFLVCFNT--TADEHTHYLYRRLGDED 984 (1128)
T ss_pred CHHHHHHHHHHHHHHH-HHhHHHH-HHHHHHHHHHHhhCCCcceeccceeeccccceehhh--hhHHHHHHHHHHhcchh
Confidence 3444445544444442 1233333 334566666655 89999999999999999876553 45667888999999999
Q ss_pred chHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHHHHhhhcC
Q psy14014 520 YLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKLNG 594 (615)
Q Consensus 520 ~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~l~~ 594 (615)
..||.+++.++..+.-...-. ...-++.+..++.|+|..+...+-.-+.++... .+.....+..+...|..
T Consensus 985 ~~V~rtclmti~fLilagq~K--VKGqlg~ma~~L~deda~Isdmar~fft~~a~K--dNt~yn~fidifs~ls~ 1055 (1128)
T COG5098 985 ADVRRTCLMTIHFLILAGQLK--VKGQLGKMALLLTDEDAEISDMARHFFTQIAKK--DNTMYNGFIDIFSTLSS 1055 (1128)
T ss_pred hHHHHHHHHHHHHHHHcccee--eccchhhhHhhccCCcchHHHHHHHHHHHHHhc--ccchhhhhHHHHHHcCc
Confidence 999999999999886432211 234577888899999999998888888777653 34455667777777753
No 192
>PF03378 CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: IPR005043 Mammalian cellular apoptosis susceptibility (CAS) proteins and the yeast chromosome-segregation protein, CSE1 are homologous []. CAS is involved in both cellular apoptosis and proliferation [, ]. Apoptosis is inhibited in CAS-depleted cells, while the expression of CAS correlates to the degree of cellular proliferation. Like CSE1, it is essential for the mitotic checkpoint in the cell cycle (CAS depletion blocks the cell in the G2 phase), and has been shown to be associated with the microtubule network and the mitotic spindle [], as is the protein MEK, which is thought to regulate the intracellular localization (predominantly nuclear vs. predominantly cytosolic) of CAS. In the nucleus, CAS acts as a nuclear transport factor in the importin pathway []. The importin pathway mediates the nuclear transport of several proteins that are necessary for mitosis and further progression. CAS is therefore thought to affect the cell cycle through its effect on the nuclear transport of these proteins []. Since apoptosis also requires the nuclear import of several proteins (such as P53 and transcription factors), it has been suggested that CAS also enables apoptosis by facilitating the nuclear import of at least a subset of these essential proteins []. This entry represents the C-terminal portion of these proteins. Structural studies of the yeast CSE1 protein indicate that this domain binds to both the transport-orchestrating protein RanGTP and the cargo molecule that is being exported [].; GO: 0005515 protein binding; PDB: 1Z3H_B 1WA5_C.
Probab=95.47 E-value=1.7 Score=44.09 Aligned_cols=188 Identities=13% Similarity=0.209 Sum_probs=108.4
Q ss_pred HHHHHHHHHhCC-CChHHHHHHHHhHHHHHHHhch---h---hhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcCh
Q psy14014 167 ELRSHFRNLCQD-DTPMVRRAAAGKLGELAKVVEV---D---YLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQ 239 (615)
Q Consensus 167 ~l~~~l~~l~~d-~~~~vR~~a~~~l~~l~~~~~~---~---~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~ 239 (615)
.+...+...++. .+|.--+..-++++.+.+...+ + .+.+.++|.+...++.+-.+.--.+.+.+..+.+.-+.
T Consensus 71 ~L~~il~~v~kNPsnP~FnHylFEsi~~lir~~~~~~~~~v~~~E~~L~P~f~~ILq~dV~EF~PYvfQIla~Lle~~~~ 150 (435)
T PF03378_consen 71 HLTAILKEVSKNPSNPRFNHYLFESIGALIRFVCEADPEAVSQFEEALFPPFQEILQQDVQEFIPYVFQILAQLLELRPS 150 (435)
T ss_dssp HHHHHHHHHHTS---HHHHHHHHHHHHHHHHHS-GGGHH---HHHHHHHHHHHHHHHTT-TTTHHHHHHHHHHHHHHSS-
T ss_pred HHHHHHHHHHhCCCCcchhhhHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 334444555554 4778888899999999887553 2 35678999999999988778888889999988888772
Q ss_pred hhH---HHhHHHHHHHhcCCCChHHH---HHHHHHHHHHHHHhCccc----hhhhHHHHHHHhhcCCcHHHHHHHHHHHH
Q psy14014 240 SDV---EQLVMPTLRQCSGDTSWRVR---YMVADKFTDLQKAVGPEI----TKTDLVQAFQMLLKDSEAEVRAAAANKVR 309 (615)
Q Consensus 240 ~~~---~~~l~~~l~~~~~d~~~~vR---~~~~~~l~~l~~~~~~~~----~~~~l~~~l~~~l~d~~~~vr~~a~~~l~ 309 (615)
... ...++|.+. ...-|..| -++...+..+...-+... ....++.++.+++..+..+ ..+..-|.
T Consensus 151 ~~~p~~y~~L~~~Ll---~p~lWe~~gniPalvrLL~a~i~k~~~~i~~~~~l~~iLgvFQkLi~sk~~D--~~gF~LL~ 225 (435)
T PF03378_consen 151 SPLPDAYKQLFPPLL---SPALWERRGNIPALVRLLQAYIKKDPSFIVANNQLEPILGVFQKLIASKAND--HYGFDLLE 225 (435)
T ss_dssp -S--TTTGGGHHHHT---SGGGGGSTTTHHHHHHHHHHHHHHHGGG----S-CHHHHHHHHHHHT-TTCH--HHHHHHHH
T ss_pred CCCcHHHHHHHHHHc---CcchhccCCCcCcHHHHHHHHHHhCchhhcchhhHHHHHHHHHHHHCCCCcc--hHHHHHHH
Confidence 222 223444443 33334322 334444444444333222 2356788888988776544 45888889
Q ss_pred HHHhhccccchhHHHHHhhHHHHH-HhhCCCCHHHHHHHHHHHHhhchhhcc
Q psy14014 310 DFCQNLDAYNQENIIMTYILPYVK-DLVADPNQHVKSALASVIMGLSPILGK 360 (615)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~l~p~l~-~~~~d~~~~vR~~~~~~l~~l~~~~g~ 360 (615)
.+..+++.+.... ++..++..+. ++-+.+.++.++.++..++.++-..|.
T Consensus 226 ~iv~~~p~~~l~~-yl~~I~~lll~RLq~skT~kf~~~fv~F~~~~~~~~g~ 276 (435)
T PF03378_consen 226 SIVENLPPEALEP-YLKQIFTLLLTRLQSSKTEKFVKRFVVFLSLFAIKYGP 276 (435)
T ss_dssp HHHHHS-HHHHGG-GHHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHH-H
T ss_pred HHHHHCCHHHHHH-HHHHHHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHcCH
Confidence 9998887654332 2333444333 333455666666666655555444443
No 193
>cd08050 TAF6 TATA Binding Protein (TBP) Associated Factor 6 (TAF6) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex. The TATA Binding Protein (TBP) Associated Factor 6 (TAF6) is one of several TAFs that bind TBP and are involved in forming Transcription Factor IID (TFIID) complex. TFIID is one of seven General Transcription Factors (GTFs) (TFIIA, TFIIB, TFIID, TFIIE, TFIIF, and TFIID) that are involved in accurate initiation of transcription by RNA polymerase II in eukaryotes. TFIID plays an important role in the recognition of promoter DNA and assembly of the pre-initiation complex. TFIID complex is composed of the TBP and at least 13 TAFs. TAFs are named after their electrophoretic mobility in polyacrylamide gels in different species. A new, unified nomenclature has been suggested for the pol II TAFs to show the relationship between TAF orthologs and paralogs. Several hypotheses are proposed for TAFs functions such as serving as
Probab=95.43 E-value=0.45 Score=46.73 Aligned_cols=72 Identities=17% Similarity=0.225 Sum_probs=51.1
Q ss_pred hHHHHHHHHHHHhc----------CCcchHHHHHHHHHHHHHHHHhChH--HhhhchhHHHHhhhcCC--CchHHHHHHH
Q psy14014 463 FFDEKLNALCMTWL----------VDHVYAIREAATLNLKKLVEQFGSE--WAQSTVIPKVVAMSRDQ--NYLHRMTCLF 528 (615)
Q Consensus 463 ~~~~~l~~~l~~~l----------~d~~~~vR~~a~~~l~~l~~~~~~~--~~~~~i~~~l~~~~~d~--~~~~R~~a~~ 528 (615)
.|...++|.++.++ .+..|.+|+.|+.+++.+++.++.. .....+..++.+.+.|+ ....+..|+.
T Consensus 254 ~Ylh~Lip~vltclv~~~l~~~~~~~~h~~LRd~AA~ll~~i~~~f~~~y~~l~~ri~~tl~k~l~d~~~~~~~~YGAi~ 333 (343)
T cd08050 254 PYLHQLIPSVLTCLVAKQLCSRPPDDNHWALRDYAARLLAQICRKFSTSYNTLQPRITRTLLKALLDPKKPLTTHYGAIV 333 (343)
T ss_pred HhHHHHHHHHHHHhhhHhhcCCCCCchHHHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHcCCCCCcchhhHHHH
Confidence 34455666666554 3467999999999999999999864 23455666777766655 3344888888
Q ss_pred HHHHHH
Q psy14014 529 CINVLA 534 (615)
Q Consensus 529 ~l~~l~ 534 (615)
++..++
T Consensus 334 GL~~lG 339 (343)
T cd08050 334 GLSALG 339 (343)
T ss_pred HHHHhC
Confidence 888775
No 194
>KOG0946|consensus
Probab=95.39 E-value=4.5 Score=42.94 Aligned_cols=321 Identities=14% Similarity=0.154 Sum_probs=169.9
Q ss_pred CCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccC-chhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCC
Q psy14014 178 DDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDE-QDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGD 256 (615)
Q Consensus 178 d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~-~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d 256 (615)
..-.+=|+.|+.+|..+++.+..+.....+-|++..+-.|- +++.-..++.++..+...=..+ . ..+|
T Consensus 34 sTL~eDRR~A~rgLKa~srkYR~~Vga~Gmk~li~vL~~D~~D~E~ik~~LdTl~il~~~dd~~--------~---v~dd 102 (970)
T KOG0946|consen 34 STLLEDRRDAVRGLKAFSRKYREEVGAQGMKPLIQVLQRDYMDPEIIKYALDTLLILTSHDDSP--------E---VMDD 102 (970)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHhhccCCHHHHHHHHHHHHHHHhcCcch--------h---hccc
Confidence 34456699999999999998776665666667766666664 4566666666665543321100 0 0111
Q ss_pred CChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHH-HHHhhHHHHHHh
Q psy14014 257 TSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENI-IMTYILPYVKDL 335 (615)
Q Consensus 257 ~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~-~~~~l~p~l~~~ 335 (615)
+. .+ ..... .++..+-+ ..+.+..+...+...+-.||..+++-+..+....+.+-+... ..+.-+..+..+
T Consensus 103 s~-qs-dd~g~---~iae~fik---~qd~I~lll~~~e~~DF~VR~~aIqLlsalls~r~~e~q~~ll~~P~gIS~lmdl 174 (970)
T KOG0946|consen 103 ST-QS-DDLGL---WIAEQFIK---NQDNITLLLQSLEEFDFHVRLYAIQLLSALLSCRPTELQDALLVSPMGISKLMDL 174 (970)
T ss_pred ch-hh-hHHHH---HHHHHHHc---CchhHHHHHHHHHhhchhhhhHHHHHHHHHHhcCCHHHHHHHHHCchhHHHHHHH
Confidence 11 11 11111 12222111 246777788888888889999999999999887776544321 123344556678
Q ss_pred hCCCCHHHHHHHHHHHHhhchhhcc-hh--hhhhhHHHHHHhhcCC---C-hhHHHHHHHhhhHhhhhhchh--HHHHHH
Q psy14014 336 VADPNQHVKSALASVIMGLSPILGK-HN--TVDHLLPLFLSQLKDE---C-PEVRLNIISNLDCVNEVIGIQ--QWRVRL 406 (615)
Q Consensus 336 ~~d~~~~vR~~~~~~l~~l~~~~g~-~~--~~~~l~p~l~~~l~d~---~-~~vr~~a~~~l~~l~~~~~~~--~~~~~~ 406 (615)
+.|...-+|-.++-.|..+...-+. +. ..+.....+...+..+ + .-|...++..+..+.+...+. -++..
T Consensus 175 L~DsrE~IRNe~iLlL~eL~k~n~~IQKlVAFENaFerLfsIIeeEGg~dGgIVveDCL~ll~NLLK~N~SNQ~~FrE~- 253 (970)
T KOG0946|consen 175 LRDSREPIRNEAILLLSELVKDNSSIQKLVAFENAFERLFSIIEEEGGLDGGIVVEDCLILLNNLLKNNISNQNFFREG- 253 (970)
T ss_pred HhhhhhhhchhHHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhhCcchhhHHhcc-
Confidence 8899999999888888877654332 11 1233444455555432 1 235666666665554432111 11111
Q ss_pred HHHhhhhhhhhccccchhhhhhhhHHHHHhhhcC---CchHHHH--HHHHhHHHHhhhCh------------HhHHHHHH
Q psy14014 407 AIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDS---KWRVRLA--IIEYMPLLAGQLGV------------EFFDEKLN 469 (615)
Q Consensus 407 ~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~---~~~vr~~--~~~~l~~l~~~~~~------------~~~~~~l~ 469 (615)
.++|.+..-+.... ..|. .|.-... ...++..+.....+ ......++
T Consensus 254 ---~~i~rL~klL~~f~-------------~~d~Ev~~W~~Qrv~Nv~~~Lqivr~lVsP~Nt~~~~~q~qk~l~ss~ll 317 (970)
T KOG0946|consen 254 ---SYIPRLLKLLSVFE-------------FGDGEVFGWSTQRVQNVIEALQIVRSLVSPGNTSSITHQNQKALVSSHLL 317 (970)
T ss_pred ---ccHHHHHhhcCccc-------------ccCcccccccHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHcchH
Confidence 13443332221110 1121 3443221 11222222111111 11223445
Q ss_pred HHHHHhcCCc--chHHHHHHHHHHHHHHHHhCh--HHhhh-----------chhHHHHhhhcC-CCchHHHHHHHHHHHH
Q psy14014 470 ALCMTWLVDH--VYAIREAATLNLKKLVEQFGS--EWAQS-----------TVIPKVVAMSRD-QNYLHRMTCLFCINVL 533 (615)
Q Consensus 470 ~~l~~~l~d~--~~~vR~~a~~~l~~l~~~~~~--~~~~~-----------~i~~~l~~~~~d-~~~~~R~~a~~~l~~l 533 (615)
..+...+-++ ...|+..+.-+++.+++.... +.+.+ .++-.+..+.+. ..+..|.++.+|+...
T Consensus 318 ~~Lc~il~~~~vp~dIltesiitvAevVRgn~~nQ~~F~~v~~p~~~~Pr~sivvllmsm~ne~q~~~lRcAv~ycf~s~ 397 (970)
T KOG0946|consen 318 DVLCTILMHPGVPADILTESIITVAEVVRGNARNQDEFADVTAPSIPNPRPSIVVLLMSMFNEKQPFSLRCAVLYCFRSY 397 (970)
T ss_pred HHHHHHHcCCCCcHhHHHHHHHHHHHHHHhchHHHHHHhhccCCCCCCCccchhHHHHHHHhccCCchHHHHHHHHHHHH
Confidence 5555544444 567899999888888775321 11111 122223334444 4667899999999887
Q ss_pred H
Q psy14014 534 A 534 (615)
Q Consensus 534 ~ 534 (615)
.
T Consensus 398 l 398 (970)
T KOG0946|consen 398 L 398 (970)
T ss_pred H
Confidence 5
No 195
>KOG2011|consensus
Probab=95.27 E-value=3.6 Score=45.70 Aligned_cols=96 Identities=14% Similarity=0.134 Sum_probs=69.0
Q ss_pred HhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchh---hcc-hhhhhh
Q psy14014 291 MLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPI---LGK-HNTVDH 366 (615)
Q Consensus 291 ~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~---~g~-~~~~~~ 366 (615)
...+|-.+++|..++..|+..+...|.- .+....+.|+-..+.|.+-.||..++++|..+.+. .+. +.+...
T Consensus 294 HRYRDV~~~IRaiCiqeLgiWi~~yP~~----Fl~dsYLKYiGWtLsDk~~~VRl~~lkaL~~L~e~~~~~~~L~lFtsR 369 (1048)
T KOG2011|consen 294 HRYRDVDPDIRAICIQELGIWIKSYPEI----FLSDSYLKYIGWTLSDKNGTVRLRCLKALIKLYEKDEDKDKLELFTSR 369 (1048)
T ss_pred eecccCchHHHHHHHHHHHHHHHhccHH----HhcchHHHHhcceeecCccHHHHHHHHHHHHHHhccccchHHHHHHHH
Confidence 3447899999999999999999987754 23456778888999999999999999999887654 111 333444
Q ss_pred hHHHHHHhh-cCCChhHHHHHHHhh
Q psy14014 367 LLPLFLSQL-KDECPEVRLNIISNL 390 (615)
Q Consensus 367 l~p~l~~~l-~d~~~~vr~~a~~~l 390 (615)
+-.-++++. .|.+..||...+..+
T Consensus 370 FK~RIVeMadrd~~~~Vrav~L~~~ 394 (1048)
T KOG2011|consen 370 FKDRIVEMADRDRNVSVRAVGLVLC 394 (1048)
T ss_pred HHHHHHHHHhhhcchhHHHHHHHHH
Confidence 444555555 455667776655543
No 196
>PF08167 RIX1: rRNA processing/ribosome biogenesis
Probab=95.22 E-value=0.65 Score=40.17 Aligned_cols=126 Identities=17% Similarity=0.082 Sum_probs=88.7
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhh---hchhHHHHhhhcCC-CchHHHHHHHHHHHHHhhhCh-
Q psy14014 465 DEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQ---STVIPKVVAMSRDQ-NYLHRMTCLFCINVLAEACGP- 539 (615)
Q Consensus 465 ~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~---~~i~~~l~~~~~d~-~~~~R~~a~~~l~~l~~~~~~- 539 (615)
.+.+...+.+++++++..-|..++..++.+++..+.+.+. ...+..++..++.+ .+.++..++.++..+......
T Consensus 23 l~~l~~ri~~LL~s~~~~~rw~G~~Ll~~~~~~~~~e~l~~~~~~W~~~Ll~~L~~~~~~~~~~~ai~~L~~l~~~~~~~ 102 (165)
T PF08167_consen 23 LHKLVTRINSLLQSKSAYSRWAGLCLLKVTVEQCSWEILLSHGSQWLRALLSILEKPDPPSVLEAAIITLTRLFDLIRGK 102 (165)
T ss_pred HHHHHHHHHHHhCCCChhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 3567777889999999999999999999999998776553 33666777777665 456788999999999876432
Q ss_pred hhH--------HHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhh--hHHhhHHHHHhhh
Q psy14014 540 TVT--------ANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETN--VIQSQVKPALDKL 592 (615)
Q Consensus 540 ~~~--------~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~--~~~~~~~~~l~~l 592 (615)
..+ .+.+.+.+.++.++ ..+...+..+|..++..+++. .+...+..++..+
T Consensus 103 p~l~Rei~tp~l~~~i~~ll~l~~~--~~~~~~~l~~L~~ll~~~ptt~rp~~~ki~~~l~~l 163 (165)
T PF08167_consen 103 PTLTREIATPNLPKFIQSLLQLLQD--SSCPETALDALATLLPHHPTTFRPFANKIESALLSL 163 (165)
T ss_pred CchHHHHhhccHHHHHHHHHHHHhc--cccHHHHHHHHHHHHHHCCccccchHHHHHHHHHHH
Confidence 111 12344455555555 677788999999999877642 3445555555443
No 197
>KOG2011|consensus
Probab=95.08 E-value=5.7 Score=44.18 Aligned_cols=128 Identities=20% Similarity=0.126 Sum_probs=95.1
Q ss_pred hhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHh---C-hHHhhhchhHHHH
Q psy14014 437 AEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQF---G-SEWAQSTVIPKVV 512 (615)
Q Consensus 437 ~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~---~-~~~~~~~i~~~l~ 512 (615)
.+|-.+.+|...++.|+...+.++..|+.+..+.++-..|.|.+..||...+.++..+...- + -+.+.+.+-.+++
T Consensus 296 YRDV~~~IRaiCiqeLgiWi~~yP~~Fl~dsYLKYiGWtLsDk~~~VRl~~lkaL~~L~e~~~~~~~L~lFtsRFK~RIV 375 (1048)
T KOG2011|consen 296 YRDVDPDIRAICIQELGIWIKSYPEIFLSDSYLKYIGWTLSDKNGTVRLRCLKALIKLYEKDEDKDKLELFTSRFKDRIV 375 (1048)
T ss_pred cccCchHHHHHHHHHHHHHHHhccHHHhcchHHHHhcceeecCccHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Confidence 46888889999999999999999998888888888777899999999999999999998762 1 1234456677777
Q ss_pred hhh-cCCCchHHHHHHHHHHHHHhh--hChhhHHHhhHHHHHhhCCCCCchHHHHHHHHH
Q psy14014 513 AMS-RDQNYLHRMTCLFCINVLAEA--CGPTVTANFLLPTVLNMAGDNVANVRFNVAKTL 569 (615)
Q Consensus 513 ~~~-~d~~~~~R~~a~~~l~~l~~~--~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l 569 (615)
.+. .|.+..||...+..+...... +..+. + -.+..++-|.++.++..+..-+
T Consensus 376 eMadrd~~~~Vrav~L~~~~~~~~~g~L~d~d----i-~~Vy~Li~d~~r~~~~aa~~fl 430 (1048)
T KOG2011|consen 376 EMADRDRNVSVRAVGLVLCLLLSSSGLLSDKD----I-LIVYSLIYDSNRRVAVAAGEFL 430 (1048)
T ss_pred HHHhhhcchhHHHHHHHHHHHHhcccccChhH----H-HHHHHHHhccCcchHHHHHHHH
Confidence 777 666788888777655544321 22222 2 3356667788888888776655
No 198
>PF07571 DUF1546: Protein of unknown function (DUF1546); InterPro: IPR011442 These proteins are associated with IPR004823 from INTERPRO in transcription initiation factor TFIID subunit 6 (TAF6).; GO: 0051090 regulation of sequence-specific DNA binding transcription factor activity, 0005634 nucleus
Probab=95.05 E-value=0.077 Score=40.50 Aligned_cols=69 Identities=19% Similarity=0.326 Sum_probs=49.4
Q ss_pred CcchHHHHHHHHHHHHHHHHhChH--HhhhchhHHHHhhhcCC--CchHHHHHHHHHHHHHhhhChhhHHHhhHHHH
Q psy14014 478 DHVYAIREAATLNLKKLVEQFGSE--WAQSTVIPKVVAMSRDQ--NYLHRMTCLFCINVLAEACGPTVTANFLLPTV 550 (615)
Q Consensus 478 d~~~~vR~~a~~~l~~l~~~~~~~--~~~~~i~~~l~~~~~d~--~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l 550 (615)
++.|.+|+.|+..++.+++.++.. .....+..++.+.+.|+ +...+..|+.++..++ ++.+...++|.+
T Consensus 17 ~~h~~LRd~AA~lL~~I~~~~~~~~~~L~~Ri~~tl~k~l~d~~~~~~t~YGAi~gL~~lG----~~~vr~~ilP~l 89 (92)
T PF07571_consen 17 DNHWALRDFAASLLAQICRKFSSSYPTLQPRITRTLLKALLDPKKPLGTHYGAIVGLSALG----PEAVRALILPNL 89 (92)
T ss_pred cchHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH----HHHHHHhhccCc
Confidence 567899999999999999988753 24456777777777765 5567888888888874 444444555544
No 199
>KOG0889|consensus
Probab=95.02 E-value=4.1 Score=50.69 Aligned_cols=300 Identities=20% Similarity=0.220 Sum_probs=158.4
Q ss_pred hhHHHHHHhhccCchhHHHHHHHHHHHHHhh----cCh------hhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Q psy14014 206 DIIPMFVNLAQDEQDSVRLLAVEACVSIASL----LSQ------SDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKA 275 (615)
Q Consensus 206 ~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~----~~~------~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~ 275 (615)
-+++.+.+.+..++.+++.....++..+-.. ++. -...+.+++-+..++.|+.|.-|.+.+..++.+...
T Consensus 984 i~ldal~~~l~~~~~~~~~~g~~~l~~i~~~~~~~l~~~~~~~~lpi~~~l~~k~~~lCy~~~wy~k~gG~~gI~~l~~~ 1063 (3550)
T KOG0889|consen 984 TFLDALVESLSHENSEMRPAGVRALKVIFSTSTLILGSPERAFKLPMFEYLLEKLCHLCYDSTWYAKDGGVNGIKCLIES 1063 (3550)
T ss_pred HHHHHHHHHHhccchhhhhhHHHHHHHHHHHHHHhhcCcchhhccchHHHHHHHHHHHhccHhHHHHcCCCceeeeehhh
Confidence 4778888888889999999988887765443 221 134556788888899999999999998888877766
Q ss_pred hCccch---hhhHHHHHHHhhcCCcHHHHH----HHHHHHHHHHhh----ccccchhHHHHHhhHHHHHHhhCCCCHHHH
Q psy14014 276 VGPEIT---KTDLVQAFQMLLKDSEAEVRA----AAANKVRDFCQN----LDAYNQENIIMTYILPYVKDLVADPNQHVK 344 (615)
Q Consensus 276 ~~~~~~---~~~l~~~l~~~l~d~~~~vr~----~a~~~l~~~~~~----~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR 344 (615)
+..... ...++..+...++|...++-. .+-..+..+... ...+.........++-.+..-+.+++..||
T Consensus 1064 ~~~~~l~d~~~d~~~~l~fvl~d~~~e~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~lv~eL~npN~~VR 1143 (3550)
T KOG0889|consen 1064 MPSLWLLDFQVDILKALFFVLKDTESEVSSLPLDEAKDILMDILRVIFIDELAEEERAKSAMNVFSPLVLELFNPNSDVR 1143 (3550)
T ss_pred chHHHHHHHHHHHhhhHHHhhcCCccccccchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHcCCchHHH
Confidence 552211 123445555566665544333 222222222221 111111112334444555556778889999
Q ss_pred HHHHHHHHhhchhhcchhhhhhhH---------HHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHH--HHH-HHHhhh
Q psy14014 345 SALASVIMGLSPILGKHNTVDHLL---------PLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWR--VRL-AIIEYM 412 (615)
Q Consensus 345 ~~~~~~l~~l~~~~g~~~~~~~l~---------p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~--~~~-~i~~~l 412 (615)
..+...|..+.+..|.+. .+++ |.+.+-+..-.-.++.+.+.+..-+.. .++.-+. ..+ .+..++
T Consensus 1144 ~~~~~~L~~i~~~s~~~v--~~L~~p~K~~ll~p~f~k~lr~~p~~~qig~vd~~~fC~~-l~p~~f~~~~~l~~l~~~~ 1220 (3550)
T KOG0889|consen 1144 EFSQKLLRLISELSGKSV--VKLLEPFKDVLLSPIFKKPLRALPFTIQIGHLDAITFCLS-LGPCLFDFTEELYRLKRFL 1220 (3550)
T ss_pred HHHHHHHHHHHHHcCCcH--HHHHHHHHHHHhccccccccccCCHHHHhhhHHHHHHHHH-cCCcccCchHHHHHHHHHH
Confidence 999999999988876532 1222 222222232233344444333322211 1111000 000 000001
Q ss_pred hhhhhccccchhhhhhhhHHHHHhhhc----CCchHHHHHHHHhHHHHhhhC-----hHhHHHHHHHHHHHhcCCcchHH
Q psy14014 413 PLLAGQLGVEFFDEKLNALSIVELAED----SKWRVRLAIIEYMPLLAGQLG-----VEFFDEKLNALCMTWLVDHVYAI 483 (615)
Q Consensus 413 ~~l~~~~~~~~~~~~l~~~~i~~~~~~----~~~~vr~~~~~~l~~l~~~~~-----~~~~~~~l~~~l~~~l~d~~~~v 483 (615)
..++.....+-+ .+.+.... ...+.|....+.+........ ...+...++..+++.+..+..++
T Consensus 1221 ~~La~~~~~~~~-------~i~k~~~~k~~~~l~~Lr~~ci~ll~~~~~~~d~~~~~~~~~r~kii~v~fk~l~~~~~Ei 1293 (3550)
T KOG0889|consen 1221 IALADAEEDELA-------TIQKTSDYKNSSSLVRLRVACIKLLAACMKLSDFRTPQHAELREKIIAVFFKSLYKRSSEL 1293 (3550)
T ss_pred HHhhhhhhhhhh-------hhhcccccccccccccchhHHHHHHHHHHhcccccchhhhhhhhHHHHHHHHHHcCChHHH
Confidence 111100000000 01111111 123356667776665543221 12245778888888888888888
Q ss_pred HHHHHHHHHHHHHH---hChHHhhhchhHHHHhhh
Q psy14014 484 REAATLNLKKLVEQ---FGSEWAQSTVIPKVVAMS 515 (615)
Q Consensus 484 R~~a~~~l~~l~~~---~~~~~~~~~i~~~l~~~~ 515 (615)
-+.+..++..+... ++.+..+....|.+.++.
T Consensus 1294 ~~~~~~~l~~v~~~~~~~~ke~lq~~lrplL~~l~ 1328 (3550)
T KOG0889|consen 1294 IEVALEGLRKVLAQDVKLPKELLQSHLRPLLMNLS 1328 (3550)
T ss_pred HHHHHHHHHhhhhccccccHHHHHhhHHHHHHhhh
Confidence 88888888777654 344444444445555543
No 200
>PF08713 DNA_alkylation: DNA alkylation repair enzyme; InterPro: IPR014825 These proteins are predicted to be DNA alkylation repair enzymes. The structure of a hypothetical protein shows it to adopt a super coiled alpha helical structure. ; PDB: 3JY1_A 3JXY_A 3JX7_A 3JXZ_A 3BVS_A 2B6C_B 1T06_B 3L9T_A.
Probab=95.01 E-value=0.92 Score=41.34 Aligned_cols=130 Identities=15% Similarity=0.137 Sum_probs=80.0
Q ss_pred HHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHHHHHhCC-CChHHHHHHHH-hHHHHHHHhchhhhHhhhHH
Q psy14014 132 PLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQD-DTPMVRRAAAG-KLGELAKVVEVDYLKTDIIP 209 (615)
Q Consensus 132 ~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~~l~~d-~~~~vR~~a~~-~l~~l~~~~~~~~~~~~ll~ 209 (615)
.++..+-.++..+.|..|+.++.......++ ...+.+...+.+ .+|.+-...|. .++.+... .+...+
T Consensus 54 ~l~~~L~~~~~~E~~~la~~il~~~~~~~~~----~~~~~~~~~~~~~~~W~~~D~~~~~~~~~~~~~------~~~~~~ 123 (213)
T PF08713_consen 54 ELADELWESGYREERYLALLILDKRRKKLTE----EDLELLEKWLPDIDNWATCDSLCSKLLGPLLKK------HPEALE 123 (213)
T ss_dssp HHHHHHHCSSCHHHHHHHHHHHHHCGGG--H----HHHHHHHHCCCCCCCHHHHHHHTHHHHHHHHHH------HGGHHH
T ss_pred HHHHHHcCCchHHHHHHHHHHhHHHhhhhhH----HHHHHHHHHhccCCcchhhhHHHHHHHHHHHHh------hHHHHH
Confidence 3444445555555666666555443322222 233444554444 56666555433 33444321 156788
Q ss_pred HHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Q psy14014 210 MFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKA 275 (615)
Q Consensus 210 ~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~ 275 (615)
.+.+..++++..+|++++..+...... ...+.++..+...+.|++..||.+...+|..++..
T Consensus 124 ~~~~W~~s~~~w~rR~~~v~~~~~~~~----~~~~~~l~~~~~~~~d~~~~vq~ai~w~L~~~~~~ 185 (213)
T PF08713_consen 124 LLEKWAKSDNEWVRRAAIVMLLRYIRK----EDFDELLEIIEALLKDEEYYVQKAIGWALREIGKK 185 (213)
T ss_dssp HHHHHHHCSSHHHHHHHHHCTTTHGGG----CHHHHHHHHHHHCTTGS-HHHHHHHHHHHHHHCTT
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHh
Confidence 889999999999999987776544433 33456778888888999999999999888887653
No 201
>PF03378 CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: IPR005043 Mammalian cellular apoptosis susceptibility (CAS) proteins and the yeast chromosome-segregation protein, CSE1 are homologous []. CAS is involved in both cellular apoptosis and proliferation [, ]. Apoptosis is inhibited in CAS-depleted cells, while the expression of CAS correlates to the degree of cellular proliferation. Like CSE1, it is essential for the mitotic checkpoint in the cell cycle (CAS depletion blocks the cell in the G2 phase), and has been shown to be associated with the microtubule network and the mitotic spindle [], as is the protein MEK, which is thought to regulate the intracellular localization (predominantly nuclear vs. predominantly cytosolic) of CAS. In the nucleus, CAS acts as a nuclear transport factor in the importin pathway []. The importin pathway mediates the nuclear transport of several proteins that are necessary for mitosis and further progression. CAS is therefore thought to affect the cell cycle through its effect on the nuclear transport of these proteins []. Since apoptosis also requires the nuclear import of several proteins (such as P53 and transcription factors), it has been suggested that CAS also enables apoptosis by facilitating the nuclear import of at least a subset of these essential proteins []. This entry represents the C-terminal portion of these proteins. Structural studies of the yeast CSE1 protein indicate that this domain binds to both the transport-orchestrating protein RanGTP and the cargo molecule that is being exported [].; GO: 0005515 protein binding; PDB: 1Z3H_B 1WA5_C.
Probab=94.93 E-value=4.6 Score=41.09 Aligned_cols=212 Identities=13% Similarity=0.079 Sum_probs=113.8
Q ss_pred cHH-HHHHHHHHhccccCCCCC--cchhhhchHHHhhhhcCc-hhHHHHHHHHHHHHHHhhcCh---h---HHhhhHHHH
Q psy14014 64 EDE-VLLALAEQLGTFTPNVGG--PEYVHCLLPPLESLATVE-ETVVRDKAVESLRLISAQHSP---H---DLEAHFVPL 133 (615)
Q Consensus 64 ~~~-vr~~a~~~l~~l~~~~~~--~~~~~~l~~~l~~l~~~~-~~~vr~~a~~~l~~l~~~~~~---~---~~~~~~l~~ 133 (615)
+++ +.+++.+.+..+-+.+.. ....+.+..++.....++ ++.--+...++++.+.+...+ + .+++.++|.
T Consensus 42 ENeylMk~iMRvl~~~~e~~~p~~~~il~~L~~il~~v~kNPsnP~FnHylFEsi~~lir~~~~~~~~~v~~~E~~L~P~ 121 (435)
T PF03378_consen 42 ENEYLMKCIMRVLSVLQEDILPIAVEILQHLTAILKEVSKNPSNPRFNHYLFESIGALIRFVCEADPEAVSQFEEALFPP 121 (435)
T ss_dssp C-HHHHHHHHHHHHHSTTTTGGGHHHHHHHHHHHHHHHHTS---HHHHHHHHHHHHHHHHHS-GGGHH---HHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhHHHHHHHHHHhccCCChhHHHHHHHHHHHH
Confidence 445 888888887766554322 223344455555555554 677888888999888887553 2 467788998
Q ss_pred HHHhhcCCCcchhhhHHhhhhhhccCCC-hhhHHHHHHHHHHHhCCCChHHHH---HHHHhHHHHHHHhchh----hhHh
Q psy14014 134 VQRLASGDWFTSRTSACGLFSVCYPRVT-AGVKAELRSHFRNLCQDDTPMVRR---AAAGKLGELAKVVEVD----YLKT 205 (615)
Q Consensus 134 l~~l~~~~~~~~r~~a~~~l~~~~~~~~-~~~~~~l~~~l~~l~~d~~~~vR~---~a~~~l~~l~~~~~~~----~~~~ 205 (615)
+......+-.+--.-+..+++.+.+.-. +...+....++..++...-|+-|- +.+..+.++.+..+.. ....
T Consensus 122 f~~ILq~dV~EF~PYvfQIla~Lle~~~~~~~p~~y~~L~~~Ll~p~lWe~~gniPalvrLL~a~i~k~~~~i~~~~~l~ 201 (435)
T PF03378_consen 122 FQEILQQDVQEFIPYVFQILAQLLELRPSSPLPDAYKQLFPPLLSPALWERRGNIPALVRLLQAYIKKDPSFIVANNQLE 201 (435)
T ss_dssp HHHHHHTT-TTTHHHHHHHHHHHHHHSS--S--TTTGGGHHHHTSGGGGGSTTTHHHHHHHHHHHHHHHGGG----S-CH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcHHHHHHHHHHcCcchhccCCCcCcHHHHHHHHHHhCchhhcchhhHH
Confidence 8877766532222223334443332222 222222223333444444454332 2333444444444332 2345
Q ss_pred hhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHh---HHHHHHH-hcCCCChHHHHHHHHHHHHHHHHhC
Q psy14014 206 DIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQL---VMPTLRQ-CSGDTSWRVRYMVADKFTDLQKAVG 277 (615)
Q Consensus 206 ~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~---l~~~l~~-~~~d~~~~vR~~~~~~l~~l~~~~~ 277 (615)
.++.++.+++.....+ ..+.+.+..+..+++.+.+.++ ++..+.+ +-+.+.++.++..+..++-++...|
T Consensus 202 ~iLgvFQkLi~sk~~D--~~gF~LL~~iv~~~p~~~l~~yl~~I~~lll~RLq~skT~kf~~~fv~F~~~~~~~~g 275 (435)
T PF03378_consen 202 PILGVFQKLIASKAND--HYGFDLLESIVENLPPEALEPYLKQIFTLLLTRLQSSKTEKFVKRFVVFLSLFAIKYG 275 (435)
T ss_dssp HHHHHHHHHHT-TTCH--HHHHHHHHHHHHHS-HHHHGGGHHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHCCCCcc--hHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHcC
Confidence 6888888888766543 4578899999999998765554 3333333 3345566666666666666665544
No 202
>PF04118 Dopey_N: Dopey, N-terminal; InterPro: IPR007249 DopA is the founding member of the Dopey family and is required for correct cell morphology and spatiotemporal organisation of multicellular structures in the filamentous fungus Emericella nidulans (Aspergillus nidulans). DopA homologues are found in mammals. Saccharomyces cerevisiae DOP1 is essential for viability and, affects cellular morphogenesis [].
Probab=94.88 E-value=3.8 Score=39.29 Aligned_cols=182 Identities=15% Similarity=0.103 Sum_probs=123.1
Q ss_pred hHHHHHHhhcCC-ChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHH
Q psy14014 367 LLPLFLSQLKDE-CPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVR 445 (615)
Q Consensus 367 l~p~l~~~l~d~-~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr 445 (615)
+-..+.+++.-. -..|...|++....+.+.+|.+.+.+.+.+ +. |-+..++......||
T Consensus 55 v~krLaqCL~P~LPsGVH~KaLevY~~IF~~ig~~~L~~dl~i--~~------------------~GLfpl~~~asi~Vk 114 (307)
T PF04118_consen 55 VSKRLAQCLNPALPSGVHQKALEVYEYIFERIGPDGLAQDLPI--YS------------------PGLFPLFSYASIQVK 114 (307)
T ss_pred HHHHHHHhcCCCCChHHHHHHHHHHHHHHHhcCHHHHHhhcHH--HH------------------HHHHHHHHHHHHhhH
Confidence 344555666543 357999999999988888887766554321 11 344455556666788
Q ss_pred HHHHHHhHHHHhhhChHhHHHHHHHH---HHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchH
Q psy14014 446 LAIIEYMPLLAGQLGVEFFDEKLNAL---CMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLH 522 (615)
Q Consensus 446 ~~~~~~l~~l~~~~~~~~~~~~l~~~---l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~ 522 (615)
-..++.+....-.+|+ ...+.+-+. ++..+.|++.++-+.+...+..+...+|.+.+-+.+.-.+. .++..
T Consensus 115 p~lL~i~e~~~lpL~~-~L~p~l~~li~slLpGLede~sE~~~~~~~ll~~l~~~v~~~~F~~~lwl~ii-----~sp~~ 188 (307)
T PF04118_consen 115 PQLLDIYEKYYLPLGP-ALRPCLKGLILSLLPGLEDEGSEFFDRTLKLLDKLKEAVGDKYFWQCLWLCII-----TSPSR 188 (307)
T ss_pred HHHHHHHHHHhcCccH-HHHHHHHHHHHHhccccccCCchHHHHHHHHHHHHHHhcChhHHHHHHHHHHh-----cCcch
Confidence 8888888877767777 334333333 44457788999999999999999999998754444444333 57778
Q ss_pred HHHHHHHHHHHHhhhC------h-hh---H----HHhhHHHHHhhCCCCCchHHHHHHHHHHHHhH
Q psy14014 523 RMTCLFCINVLAEACG------P-TV---T----ANFLLPTVLNMAGDNVANVRFNVAKTLQKIGP 574 (615)
Q Consensus 523 R~~a~~~l~~l~~~~~------~-~~---~----~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~ 574 (615)
|..|+..+..-..... . +. + ...+...+...++|++.-|+.++...|-.-.+
T Consensus 189 Rl~al~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~Llv~al~~~L~D~~iLVqR~~LDlLl~~~P 254 (307)
T PF04118_consen 189 RLGALNYLLRRLPKFQNDELSLSSEEQEYCLGPDPGLLVRALCACLEDENILVQRGFLDLLLSHFP 254 (307)
T ss_pred hHHHHHHHHHhCCcccccccccchHHHHHhcCCCccHHHHHHHHHhCCchHHHHHHHHHHHHHhCC
Confidence 9999987776554433 1 10 1 13466777888899988888888777766554
No 203
>PF12074 DUF3554: Domain of unknown function (DUF3554); InterPro: IPR022716 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is typically between 287 to 356 amino acids in length. This domain is found associated with PF02985 from PFAM.
Probab=94.88 E-value=3.8 Score=40.47 Aligned_cols=58 Identities=12% Similarity=0.016 Sum_probs=38.1
Q ss_pred CCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHh
Q psy14014 177 QDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIAS 235 (615)
Q Consensus 177 ~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~ 235 (615)
++.+.......+.+++..+..++. .....++..+.+-++|....+|+.-+..++....
T Consensus 33 KE~nE~aL~~~l~al~~~~~~~~~-~~~~~~~~~~~kGl~~kk~~vR~~w~~~~~~~~~ 90 (339)
T PF12074_consen 33 KESNEAALSALLSALFKHLFFLSS-ELPKKVVDAFKKGLKDKKPPVRRAWLLCLGEALW 90 (339)
T ss_pred hhcCHHHHHHHHHHHHHHHHHhCc-CCCHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHh
Confidence 345666677777777766666522 2345677777777777777788777777766654
No 204
>PF12074 DUF3554: Domain of unknown function (DUF3554); InterPro: IPR022716 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is typically between 287 to 356 amino acids in length. This domain is found associated with PF02985 from PFAM.
Probab=94.83 E-value=0.88 Score=44.94 Aligned_cols=87 Identities=17% Similarity=0.095 Sum_probs=54.3
Q ss_pred HHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcHH-HHHHHHHHhccccCCCCCcchhhhchHHHhhhhcCchhHHH
Q psy14014 29 LRLNSIKKLSTIALALGQERTRGELIPFLTETIYDEDE-VLLALAEQLGTFTPNVGGPEYVHCLLPPLESLATVEETVVR 107 (615)
Q Consensus 29 ~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~~-vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~l~~~~~~~vr 107 (615)
.|....+.|..+...--...+.+.+.|++.. +.+| .......+|+.-...+ +.+..+.++..+...+++..+.+|
T Consensus 3 ~r~~~~~~L~~l~~~~~s~~i~~~l~~~~~K---E~nE~aL~~~l~al~~~~~~~-~~~~~~~~~~~~~kGl~~kk~~vR 78 (339)
T PF12074_consen 3 QRVLHASMLSSLPSSSLSSKIVQGLSPLLSK---ESNEAALSALLSALFKHLFFL-SSELPKKVVDAFKKGLKDKKPPVR 78 (339)
T ss_pred HHHHHHHHHHhCCCcchHHHHHHHHHHHHHh---hcCHHHHHHHHHHHHHHHHHh-CcCCCHHHHHHHHHHhcCCCCcHH
Confidence 4555555555553210112233444444432 2334 6777777777654433 334457788889999999999999
Q ss_pred HHHHHHHHHHHh
Q psy14014 108 DKAVESLRLISA 119 (615)
Q Consensus 108 ~~a~~~l~~l~~ 119 (615)
..++..++....
T Consensus 79 ~~w~~~~~~~~~ 90 (339)
T PF12074_consen 79 RAWLLCLGEALW 90 (339)
T ss_pred HHHHHHHHHHHh
Confidence 999999998776
No 205
>PF12054 DUF3535: Domain of unknown function (DUF3535); InterPro: IPR022707 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is typically between 439 to 459 amino acids in length. This domain is found associated with PF00271 from PFAM, PF02985 from PFAM, and PF00176 from PFAM. This domain has two completely conserved residues (P and K) that may be functionally important.
Probab=94.71 E-value=5.6 Score=40.65 Aligned_cols=75 Identities=23% Similarity=0.174 Sum_probs=40.9
Q ss_pred hHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHH---HhHHHHHHHhcC
Q psy14014 181 PMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVE---QLVMPTLRQCSG 255 (615)
Q Consensus 181 ~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~---~~l~~~l~~~~~ 255 (615)
.+.|-.++++||.++..++.+......-+.+..+++.....-|..+.-.+...+......... +.+.+.+...++
T Consensus 101 ~r~Ri~aA~ALG~l~~~~~~~~~~~~~~~~L~~~L~S~sa~qR~~aalvl~ewa~~~~~~~~~~~~~~l~~~L~~~L~ 178 (441)
T PF12054_consen 101 IRARIAAAKALGLLLSYWPESSLQEIFQPLLLPYLNSPSATQRLLAALVLEEWAKACKERNPSPPPQALSPRLLEILE 178 (441)
T ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhCccccCCccHHHHHHHHHHHHc
Confidence 456666777777777666544333323335666666666666666666666666555432111 234444555444
No 206
>cd08050 TAF6 TATA Binding Protein (TBP) Associated Factor 6 (TAF6) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex. The TATA Binding Protein (TBP) Associated Factor 6 (TAF6) is one of several TAFs that bind TBP and are involved in forming Transcription Factor IID (TFIID) complex. TFIID is one of seven General Transcription Factors (GTFs) (TFIIA, TFIIB, TFIID, TFIIE, TFIIF, and TFIID) that are involved in accurate initiation of transcription by RNA polymerase II in eukaryotes. TFIID plays an important role in the recognition of promoter DNA and assembly of the pre-initiation complex. TFIID complex is composed of the TBP and at least 13 TAFs. TAFs are named after their electrophoretic mobility in polyacrylamide gels in different species. A new, unified nomenclature has been suggested for the pol II TAFs to show the relationship between TAF orthologs and paralogs. Several hypotheses are proposed for TAFs functions such as serving as
Probab=94.63 E-value=1 Score=44.24 Aligned_cols=137 Identities=13% Similarity=0.201 Sum_probs=83.9
Q ss_pred HHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccC-------chhHHHHHHHHHHHHHhh--cCh
Q psy14014 169 RSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDE-------QDSVRLLAVEACVSIASL--LSQ 239 (615)
Q Consensus 169 ~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~-------~~~vr~~a~~~l~~l~~~--~~~ 239 (615)
+..+...+.+.+...|..++..|.. +...+.++|.|..++.+. +...-...+.....+..+ +.-
T Consensus 180 f~~It~a~~~~~~~~r~~aL~sL~t-------D~gl~~LlPyf~~fI~~~v~~n~~~nl~~L~~lm~~v~ALl~N~~l~l 252 (343)
T cd08050 180 FEEITEALVGSNEEKRREALQSLRT-------DPGLQQLLPYFVRFIAEGVTVNLDQNLALLIYLMRMVRALLDNPNLHL 252 (343)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHhcc-------CCCchhhhhHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHhcCCCCch
Confidence 3444455556677777776665433 344678999999888654 222222223333333322 112
Q ss_pred hhHHHhHHHHHHHhc----------CCCChHHHHHHHHHHHHHHHHhCccc--hhhhHHHHHHHhhcCCc--HHHHHHHH
Q psy14014 240 SDVEQLVMPTLRQCS----------GDTSWRVRYMVADKFTDLQKAVGPEI--TKTDLVQAFQMLLKDSE--AEVRAAAA 305 (615)
Q Consensus 240 ~~~~~~l~~~l~~~~----------~d~~~~vR~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l~d~~--~~vr~~a~ 305 (615)
+.+...++|.+..++ .+.+|.+|..++..++.++..++... ....+...+.+.+.|+. ...+-.|+
T Consensus 253 e~Ylh~Lip~vltclv~~~l~~~~~~~~h~~LRd~AA~ll~~i~~~f~~~y~~l~~ri~~tl~k~l~d~~~~~~~~YGAi 332 (343)
T cd08050 253 EPYLHQLIPSVLTCLVAKQLCSRPPDDNHWALRDYAARLLAQICRKFSTSYNTLQPRITRTLLKALLDPKKPLTTHYGAI 332 (343)
T ss_pred HHhHHHHHHHHHHHhhhHhhcCCCCCchHHHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHcCCCCCcchhhHHH
Confidence 344555777776654 35679999999999999999888653 23456656666666654 23366777
Q ss_pred HHHHHHH
Q psy14014 306 NKVRDFC 312 (615)
Q Consensus 306 ~~l~~~~ 312 (615)
..|..++
T Consensus 333 ~GL~~lG 339 (343)
T cd08050 333 VGLSALG 339 (343)
T ss_pred HHHHHhC
Confidence 7776654
No 207
>cd03568 VHS_STAM VHS domain family, STAM subfamily; members include STAM (Signal Transducing Adaptor Molecule), EAST (EGFR-associated protein with SH3 and TAM domains) and Hbp (Hrs-binding protein). Collectively, they are referred to as STAM. All STAMs have at their N-termini a VHS domain, which is involved in cytokine-mediated intracellular signal transduction and has a superhelical structure similar to the structure of ARM (Armadillo) repeats, followed by a SH3 (Src homology 3) domain, a well-established protein-protein interaction domain. At the C-termini of most vertebrate STAMS, an ITAM (Immunoreceptor Tyrosine-based Activation) motif is present, which mediates the binding of HRS (hepatocyte growth factor-regulated tyrosine kinase substrate) in endocytic and exocytic machineries.
Probab=94.51 E-value=1.1 Score=37.47 Aligned_cols=102 Identities=18% Similarity=0.209 Sum_probs=76.4
Q ss_pred cCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHH
Q psy14014 254 SGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVK 333 (615)
Q Consensus 254 ~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~ 333 (615)
+..++|..-..++..+.. ........+..+.+.+.+.++.|...|+..|..+.++++.....+.....++..+.
T Consensus 13 l~~~dw~~il~icD~I~~------~~~~~k~a~ral~KRl~~~n~~v~l~AL~LLe~~vkNCG~~fh~evask~Fl~eL~ 86 (144)
T cd03568 13 LTSENWGLILDVCDKVKS------DENGAKDCLKAIMKRLNHKDPNVQLRALTLLDACAENCGKRFHQEVASRDFTQELK 86 (144)
T ss_pred CCCcCHHHHHHHHHHHhc------CCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCHHHHHHHhhHHHHHHHH
Confidence 345677654444443332 11234577888889999999999999999999999999987766666677888888
Q ss_pred HhhCC-CCHHHHHHHHHHHHhhchhhcch
Q psy14014 334 DLVAD-PNQHVKSALASVIMGLSPILGKH 361 (615)
Q Consensus 334 ~~~~d-~~~~vR~~~~~~l~~l~~~~g~~ 361 (615)
+++.+ .+..||.-++..+...+..+..+
T Consensus 87 kl~~~~~~~~Vk~kil~li~~W~~~f~~~ 115 (144)
T cd03568 87 KLINDRVHPTVKEKLREVVKQWADEFKND 115 (144)
T ss_pred HHhcccCCHHHHHHHHHHHHHHHHHhCCC
Confidence 88887 78899998888888877766543
No 208
>PF08713 DNA_alkylation: DNA alkylation repair enzyme; InterPro: IPR014825 These proteins are predicted to be DNA alkylation repair enzymes. The structure of a hypothetical protein shows it to adopt a super coiled alpha helical structure. ; PDB: 3JY1_A 3JXY_A 3JX7_A 3JXZ_A 3BVS_A 2B6C_B 1T06_B 3L9T_A.
Probab=94.33 E-value=3.6 Score=37.41 Aligned_cols=134 Identities=15% Similarity=0.148 Sum_probs=94.0
Q ss_pred hhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCC-CChHHHHHH-HHHHHHHHHHhCccchh
Q psy14014 205 TDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGD-TSWRVRYMV-ADKFTDLQKAVGPEITK 282 (615)
Q Consensus 205 ~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d-~~~~vR~~~-~~~l~~l~~~~~~~~~~ 282 (615)
.........+..++..+.|..|+..+....... ....++.+...+.+ ++|.+-..+ ...++.+... .
T Consensus 50 ~~~~~l~~~L~~~~~~E~~~la~~il~~~~~~~-----~~~~~~~~~~~~~~~~~W~~~D~~~~~~~~~~~~~------~ 118 (213)
T PF08713_consen 50 EELYELADELWESGYREERYLALLILDKRRKKL-----TEEDLELLEKWLPDIDNWATCDSLCSKLLGPLLKK------H 118 (213)
T ss_dssp HHHHHHHHHHHCSSCHHHHHHHHHHHHHCGGG-------HHHHHHHHHCCCCCCCHHHHHHHTHHHHHHHHHH------H
T ss_pred hHHHHHHHHHcCCchHHHHHHHHHHhHHHhhhh-----hHHHHHHHHHHhccCCcchhhhHHHHHHHHHHHHh------h
Confidence 345667777888888899988888776543322 22356666666655 567666665 4445555432 1
Q ss_pred hhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchh
Q psy14014 283 TDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPI 357 (615)
Q Consensus 283 ~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~ 357 (615)
+.+.+.+.+.++++++-+|..++..+-.+... ...+.++..+...+.|++..||.++.++|..++..
T Consensus 119 ~~~~~~~~~W~~s~~~w~rR~~~v~~~~~~~~--------~~~~~~l~~~~~~~~d~~~~vq~ai~w~L~~~~~~ 185 (213)
T PF08713_consen 119 PEALELLEKWAKSDNEWVRRAAIVMLLRYIRK--------EDFDELLEIIEALLKDEEYYVQKAIGWALREIGKK 185 (213)
T ss_dssp GGHHHHHHHHHHCSSHHHHHHHHHCTTTHGGG--------CHHHHHHHHHHHCTTGS-HHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHh--------cCHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHh
Confidence 56888899999999999999888777554443 12466777888889999999999999999988754
No 209
>PF12231 Rif1_N: Rap1-interacting factor 1 N terminal; InterPro: IPR022031 This domain family is found in eukaryotes, and is typically between 135 and 146 amino acids in length. Rif1 is a protein which interacts with Rap1 to regulate telomere length. Interaction with telomeres limits their length. The N-terminal region contains many HEAT- and ARMADILLO- type repeats. These are helical folds which form extended curved proteins or RNA interface surfaces.
Probab=94.31 E-value=6.4 Score=39.38 Aligned_cols=192 Identities=11% Similarity=0.045 Sum_probs=98.4
Q ss_pred ChHHHHHHHHhHHHHHHHhchhh--hHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCC
Q psy14014 180 TPMVRRAAAGKLGELAKVVEVDY--LKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDT 257 (615)
Q Consensus 180 ~~~vR~~a~~~l~~l~~~~~~~~--~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~ 257 (615)
+..+-...+.++..+....+... ....-+|.+...+-+....+|..|+.....+...++++......+....+....+
T Consensus 147 s~si~~erL~i~~~ll~q~p~~M~~~~~~W~~~l~~~l~~~~k~ir~~a~~l~~~~~~~l~~~~~~s~~~~~~~~~~~~~ 226 (372)
T PF12231_consen 147 SKSIISERLNIYKRLLSQFPQQMIKHADIWFPILFPDLLSSAKDIRTKAISLLLEAKKCLGPNKELSKSVLEDLQRSLEN 226 (372)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhChhHHHHHHHHHHhcccccc
Confidence 33344444444444444443311 1223455555555567788898888888777777776543333222222211122
Q ss_pred ChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhC
Q psy14014 258 SWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVA 337 (615)
Q Consensus 258 ~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~ 337 (615)
. .+.....+-+..+...-+......++...+..++.+.- ...-.+.+..+......++
T Consensus 227 ~-~~~~~~~~~L~~mi~~~~~~~~a~~iW~~~i~LL~~~~---------------------~~~w~~~n~wL~v~e~cFn 284 (372)
T PF12231_consen 227 G-KLIQLYCERLKEMIKSKDEYKLAMQIWSVVILLLGSSR---------------------LDSWEHLNEWLKVPEKCFN 284 (372)
T ss_pred c-cHHHHHHHHHHHHHhCcCCcchHHHHHHHHHHHhCCch---------------------hhccHhHhHHHHHHHHHhc
Confidence 2 34444444444443322222223345555555553322 0111245566677777899
Q ss_pred CCCHHHHHHHHHHHHhhchhhcchhh-----hhhhHHHHHHhhcC-CCh----hHHHHHHHhhhHh
Q psy14014 338 DPNQHVKSALASVIMGLSPILGKHNT-----VDHLLPLFLSQLKD-ECP----EVRLNIISNLDCV 393 (615)
Q Consensus 338 d~~~~vR~~~~~~l~~l~~~~g~~~~-----~~~l~p~l~~~l~d-~~~----~vr~~a~~~l~~l 393 (615)
++++.+|..+..+...+......+.. ..-+..++...++. ... +++..++..++.+
T Consensus 285 ~~d~~~k~~A~~aW~~liy~~~~~~~~~~k~l~lL~~Pl~~~l~~~~~~~~~~~~~~~ll~~l~~l 350 (372)
T PF12231_consen 285 SSDPQVKIQAFKAWRRLIYASNPNELTSPKRLKLLCQPLSSQLRREKSSKTKEEVWWYLLYSLCNL 350 (372)
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCccccHHHHHHHHHHHHHHhCccccccccHHHHHHHHHHHhch
Confidence 99999999999998888775543221 12222333334432 222 6777777666544
No 210
>PF08161 NUC173: NUC173 domain; InterPro: IPR012978 This is the central domain of a novel family of hypothetical nucleolar proteins [].
Probab=94.26 E-value=1.3 Score=39.40 Aligned_cols=162 Identities=14% Similarity=0.137 Sum_probs=92.1
Q ss_pred HHHHHHhHHHHhhhChHh--HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHH
Q psy14014 446 LAIIEYMPLLAGQLGVEF--FDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHR 523 (615)
Q Consensus 446 ~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R 523 (615)
..++..+..+...+|... ....++..+-++-.+++...|..+-.++|..+..+|++.+.+ ++|--++. .+....-|
T Consensus 18 ~~vl~v~s~lf~~lg~~~~~~l~~~L~~l~~lr~~~~f~~~~~~e~~lgaAi~amGpe~vL~-~lPLnl~~-~~~~~~~r 95 (198)
T PF08161_consen 18 PEVLNVLSALFEKLGERSSPLLKPILKTLGDLRESEDFSFRKELEQVLGAAIRAMGPEQVLS-ILPLNLDN-ADDSQPGR 95 (198)
T ss_pred HHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHCCHHHHHH-HCCCCccC-CCcCCccc
Confidence 445666666666666542 122233334445566678899999999999999999986553 55522221 22333334
Q ss_pred HHHHHHHHHHHhhhChhhHHHhhHHHHHhhCC------CCCchHHHHHHHHH-HHHhHhhh-----h----hhHHhhHHH
Q psy14014 524 MTCLFCINVLAEACGPTVTANFLLPTVLNMAG------DNVANVRFNVAKTL-QKIGPILE-----T----NVIQSQVKP 587 (615)
Q Consensus 524 ~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~------D~~~~vr~~a~~~l-~~l~~~~~-----~----~~~~~~~~~ 587 (615)
.-.+=.+..-.....-.+|.++++|....+-+ .....+-.....++ .++=..++ + +.+ ..+-+
T Consensus 96 aWLLPlLr~~i~~~~L~fF~~~~lPla~~~~~~~~~~~~~~~~~~ak~~~~l~~QlWslLP~FC~~P~D~~~~F-~~~a~ 174 (198)
T PF08161_consen 96 AWLLPLLRDHIRNASLSFFVEEFLPLARRLRQKAQKASEAGKSVEAKIYETLVQQLWSLLPGFCNYPTDLAESF-PSFAK 174 (198)
T ss_pred chhHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhHHhcCCcccHHHHH-HHHHH
Confidence 44444444444445567788888887666421 12222222222222 22211111 1 233 55566
Q ss_pred HHhhhcCCCCccHHHHHHHHHHHH
Q psy14014 588 ALDKLNGDTDVDVKYFAQEAISSI 611 (615)
Q Consensus 588 ~l~~l~~d~d~~v~~~a~~a~~~~ 611 (615)
.+..++.|+ ++.|...+.|++.+
T Consensus 175 ~L~~~L~~~-~~LR~~Ic~aL~~L 197 (198)
T PF08161_consen 175 LLGNALYDQ-PDLRPIICQALRRL 197 (198)
T ss_pred HHHHHHhcC-cchHHHHHHHHHHH
Confidence 666666665 89999999999875
No 211
>KOG2022|consensus
Probab=94.26 E-value=9.6 Score=41.20 Aligned_cols=186 Identities=12% Similarity=0.094 Sum_probs=118.3
Q ss_pred hhhhHHhhhhhhccCCChhhHHHHHHHHHHHhCCCC-----hHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhc---
Q psy14014 145 SRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQDDT-----PMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQ--- 216 (615)
Q Consensus 145 ~r~~a~~~l~~~~~~~~~~~~~~l~~~l~~l~~d~~-----~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~--- 216 (615)
.|..-..++-..|..+++...+.+...+-+++.|.+ |..-.+++-.+-.++...+... ...+|-+.+..-
T Consensus 440 YR~diSD~~~~~Y~ilgd~ll~~L~~~l~q~~aa~d~~p~s~~~tEaci~~~~sva~~~~~t~--~~~i~rl~~~~asik 517 (982)
T KOG2022|consen 440 YRKDISDLLMSSYSILGDGLLDFLIDTLEQALAAGDEDPDSLNRTEACIFQFQSVAEYLGETE--STWIPRLFETSASIK 517 (982)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHHHHHHhhcCcch--hHHHHHHHHhccccc
Confidence 344444555566666666666666667777776665 7888888889999998887642 233555544432
Q ss_pred --cCchhHHHHHHHHHHHHHhhcChhh-HHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccc--hhhhHHHHHHH
Q psy14014 217 --DEQDSVRLLAVEACVSIASLLSQSD-VEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEI--TKTDLVQAFQM 291 (615)
Q Consensus 217 --d~~~~vr~~a~~~l~~l~~~~~~~~-~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~--~~~~l~~~l~~ 291 (615)
-.++..-..+...++.++..+++.. ..+..+|.+.+.+..+.. -..+...+.++++....+. ..++++.....
T Consensus 518 ~S~~n~ql~~Tss~~igs~s~~l~e~P~~ln~sl~~L~~~Lh~sk~--s~q~i~tl~tlC~~C~~~L~py~d~~~a~~~e 595 (982)
T KOG2022|consen 518 LSAPNPQLLSTSSDLIGSLSNWLGEHPMYLNPSLPLLFQGLHNSKE--SEQAISTLKTLCETCPESLDPYADQFSAVCYE 595 (982)
T ss_pred cccCChhHHHHHHHHHHHHHHHHhcCCcccCchHHHHHHHhcCchH--HHHHHHHHHHHHHhhhhhCchHHHHHHHHHHH
Confidence 2366777888999999998887653 345577888887764433 2334445777777655443 23455555555
Q ss_pred hhcCC--cHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHH
Q psy14014 292 LLKDS--EAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKD 334 (615)
Q Consensus 292 ~l~d~--~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~ 334 (615)
.+... .+..|....+++|.+...+.++.+.+.....+-|++.+
T Consensus 596 ~l~~~~~~~S~~~klm~sIGyvls~~~pEe~~kyl~~lin~il~q 640 (982)
T KOG2022|consen 596 VLNKSNAKDSDRLKLMKSIGYVLSRLKPEEIPKYLMKLINPILSQ 640 (982)
T ss_pred HhcccccCchHHHHHHHHHHHHHHhccHHhHHHHHHHHHHHHHHH
Confidence 44332 35779999999999998877665554444444444433
No 212
>PF11864 DUF3384: Domain of unknown function (DUF3384); InterPro: IPR024584 This entry represents the N-terminal domain of tuberin which is functionally uncharacterised.
Probab=94.14 E-value=8.2 Score=39.98 Aligned_cols=150 Identities=15% Similarity=0.088 Sum_probs=71.6
Q ss_pred hHHHHHHHhhc-CCcHHHHHHHHHHHHHHHhh--ccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcc
Q psy14014 284 DLVQAFQMLLK-DSEAEVRAAAANKVRDFCQN--LDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGK 360 (615)
Q Consensus 284 ~l~~~l~~~l~-d~~~~vr~~a~~~l~~~~~~--~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~ 360 (615)
.++..+...+. ...++.-.+++..++.+..+ +|.+ ....++..|....+-. .....+-+++.+++..-.
T Consensus 176 ~lv~~i~~iC~~Ts~~~di~~~L~vldaii~y~~iP~~-----sl~~~i~vLCsi~~~~--~l~~~~w~~m~nL~~S~~- 247 (464)
T PF11864_consen 176 SLVDQICTICKSTSSEDDIEACLSVLDAIITYGDIPSE-----SLSPCIEVLCSIVNSV--SLCKPSWRTMRNLLKSHL- 247 (464)
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHHHHHcCcCChH-----HHHHHHHHHhhHhccc--ccchhHHHHHHHHHcCcc-
Confidence 34444444432 23333336777777777663 3332 2344444554443322 334444445555553211
Q ss_pred hhhhhhhHHHHHHhhc--C----CChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHH
Q psy14014 361 HNTVDHLLPLFLSQLK--D----ECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIV 434 (615)
Q Consensus 361 ~~~~~~l~p~l~~~l~--d----~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~ 434 (615)
....+-.+...+. + ++..+-.+|+..+..+.-..+.+. +|.+. +-...+. |.+.
T Consensus 248 ---g~~~i~~L~~iL~~~~~~~~~~~~~lRGAv~~l~~ll~~~~~~~----------~~~l~------~~~~~vl-~sl~ 307 (464)
T PF11864_consen 248 ---GHSAIRTLCDILRSPDPQNKRDINVLRGAVFFLRMLLWGSGEQG----------YPSLP------FSPSSVL-PSLL 307 (464)
T ss_pred ---HHHHHHHHHHHHcccCccccccHHHHhhHHHHHHHHHhccccCC----------cceec------ccHHHHH-HHHH
Confidence 1233445555552 2 345666788887776543332211 11110 0000111 5666
Q ss_pred HhhhcCCchHHHHHHHHhHHHH-hhhCh
Q psy14014 435 ELAEDSKWRVRLAIIEYMPLLA-GQLGV 461 (615)
Q Consensus 435 ~~~~~~~~~vr~~~~~~l~~l~-~~~~~ 461 (615)
..++..+.++=..++..+..+. +.++.
T Consensus 308 ~al~~~~~~v~~eIl~~i~~ll~~~~~~ 335 (464)
T PF11864_consen 308 NALKSNSPRVDYEILLLINRLLDGKYGR 335 (464)
T ss_pred HHHhCCCCeehHHHHHHHHHHHhHhhhh
Confidence 6777666666666666666665 44443
No 213
>KOG2549|consensus
Probab=94.14 E-value=2 Score=43.51 Aligned_cols=59 Identities=15% Similarity=0.249 Sum_probs=46.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHhChHH--hhhchhHHHHhhhcCC--CchHHHHHHHHHHHHHh
Q psy14014 477 VDHVYAIREAATLNLKKLVEQFGSEW--AQSTVIPKVVAMSRDQ--NYLHRMTCLFCINVLAE 535 (615)
Q Consensus 477 ~d~~~~vR~~a~~~l~~l~~~~~~~~--~~~~i~~~l~~~~~d~--~~~~R~~a~~~l~~l~~ 535 (615)
.|..|.+|.-|+..+..+++.++... ....++.++.+.+.|+ .+..+..++.++..++.
T Consensus 308 ~dnhwaLRDfAA~ll~~i~k~f~~~y~~L~~Rit~tl~k~l~D~~~~~st~YGai~gL~~lg~ 370 (576)
T KOG2549|consen 308 LDNHWALRDFAARLLAQICKNFSTLYNNLQPRITRTLSKALLDNKKPLSTHYGAIAGLSELGH 370 (576)
T ss_pred ccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHhhh
Confidence 46789999999999999999998642 3455777777777665 66778888888888764
No 214
>PF04118 Dopey_N: Dopey, N-terminal; InterPro: IPR007249 DopA is the founding member of the Dopey family and is required for correct cell morphology and spatiotemporal organisation of multicellular structures in the filamentous fungus Emericella nidulans (Aspergillus nidulans). DopA homologues are found in mammals. Saccharomyces cerevisiae DOP1 is essential for viability and, affects cellular morphogenesis [].
Probab=94.12 E-value=5.7 Score=38.12 Aligned_cols=124 Identities=17% Similarity=0.166 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHHHHHhhcChhHHhhh---HHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHH---HHHhC
Q psy14014 104 TVVRDKAVESLRLISAQHSPHDLEAH---FVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHF---RNLCQ 177 (615)
Q Consensus 104 ~~vr~~a~~~l~~l~~~~~~~~~~~~---~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l---~~l~~ 177 (615)
..|...|.++...+.+.++++.+... ..|=+..+.......+|..-..++...+-.+++....-+.+++ +..+.
T Consensus 69 sGVH~KaLevY~~IF~~ig~~~L~~dl~i~~~GLfpl~~~asi~Vkp~lL~i~e~~~lpL~~~L~p~l~~li~slLpGLe 148 (307)
T PF04118_consen 69 SGVHQKALEVYEYIFERIGPDGLAQDLPIYSPGLFPLFSYASIQVKPQLLDIYEKYYLPLGPALRPCLKGLILSLLPGLE 148 (307)
T ss_pred hHHHHHHHHHHHHHHHhcCHHHHHhhcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccc
Confidence 46888899999999998888766543 2333333333334567777777777666666665544444444 44457
Q ss_pred CCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHH
Q psy14014 178 DDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVS 232 (615)
Q Consensus 178 d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~ 232 (615)
|++.++...+...+..+...++.+.++..+.-.+. .++.+|..|+..+..
T Consensus 149 de~sE~~~~~~~ll~~l~~~v~~~~F~~~lwl~ii-----~sp~~Rl~al~~l~~ 198 (307)
T PF04118_consen 149 DEGSEFFDRTLKLLDKLKEAVGDKYFWQCLWLCII-----TSPSRRLGALNYLLR 198 (307)
T ss_pred cCCchHHHHHHHHHHHHHHhcChhHHHHHHHHHHh-----cCcchhHHHHHHHHH
Confidence 78888889999999999888888766665555544 457788887777654
No 215
>KOG1222|consensus
Probab=93.98 E-value=7.4 Score=38.86 Aligned_cols=119 Identities=13% Similarity=0.136 Sum_probs=77.0
Q ss_pred hHHHHHHHHHHHHHhhcChh--hHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccch--hhhHHHHHHHhhcCC
Q psy14014 221 SVRLLAVEACVSIASLLSQS--DVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEIT--KTDLVQAFQMLLKDS 296 (615)
Q Consensus 221 ~vr~~a~~~l~~l~~~~~~~--~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~--~~~l~~~l~~~l~d~ 296 (615)
..-+.|+..+..+++.+.-+ .....++.++.+.++-.+...-..+...+-.++....+... ...++.-+.+++.-+
T Consensus 278 qLLrva~ylLlNlAed~~~ElKMrrkniV~mLVKaLdr~n~~Ll~lv~~FLkKLSIf~eNK~~M~~~~iveKL~klfp~~ 357 (791)
T KOG1222|consen 278 QLLRVAVYLLLNLAEDISVELKMRRKNIVAMLVKALDRSNSSLLTLVIKFLKKLSIFDENKIVMEQNGIVEKLLKLFPIQ 357 (791)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHHHHHHcccchHHHHHHHHHHHHhhhhccchHHHHhccHHHHHHHhcCCC
Confidence 34456677777788777654 23445777888877766655555555555555544333322 235778888999999
Q ss_pred cHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCH
Q psy14014 297 EAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQ 341 (615)
Q Consensus 297 ~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~ 341 (615)
+++.|...+..+-.+.. ....+.+.+...++|.+..++++...
T Consensus 358 h~dL~~~tl~LlfNlSF--D~glr~KMv~~GllP~l~~ll~~d~~ 400 (791)
T KOG1222|consen 358 HPDLRKATLMLLFNLSF--DSGLRPKMVNGGLLPHLASLLDSDTK 400 (791)
T ss_pred CHHHHHHHHHHhhhccc--cccccHHHhhccchHHHHHHhCCccc
Confidence 99999988877765543 23333344566788999888876543
No 216
>PF08389 Xpo1: Exportin 1-like protein; InterPro: IPR013598 The exchange of macromolecules between the nucleus and cytoplasm takes place through nuclear pore complexes within the nuclear membrane. Active transport of large molecules through these pore complexes require carrier proteins, called karyopherins (importins and exportins), which shuttle between the two compartments. This domain is found close to the N terminus of yeast exportin 1 (Xpo1, Crm1, P14068 from SWISSPROT), as well as adjacent to the N-terminal domain of importin-beta (IPR001494 from INTERPRO). Exportin 1 is a nuclear export receptor that translocates proteins out of the nucleus; it interacts with leucine-rich nuclear export signal (NES) sequences in proteins to be transported, as well as with RanGTP [, ]. Importin-beta is a nuclear import receptor that translocates proteins into the nucleus; it interacts with RanGTP and importin-alpha, the latter binding with the nuclear localisation signal (NLS) sequences in proteins to be transported []. More information about these proteins can be found at Protein of the Month: Importins [].; PDB: 3IBV_A 3ICQ_U 3M1I_C 3NC1_A 3NBY_D 3NBZ_D 3NC0_A 3GJX_D 2XWU_B 2X19_B ....
Probab=93.93 E-value=1.3 Score=37.47 Aligned_cols=142 Identities=19% Similarity=0.222 Sum_probs=84.6
Q ss_pred hHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCC-CCh
Q psy14014 181 PMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGD-TSW 259 (615)
Q Consensus 181 ~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d-~~~ 259 (615)
+-||...+.++..++...-++. |+.+++-+.+.++.+ +......+..+..+.+.+.+ ..+. ...
T Consensus 2 ~~i~~kl~~~l~~i~~~~~P~~-Wp~~l~~l~~~~~~~-~~~~~~~L~iL~~l~eEi~~-------------~~~~~~~~ 66 (148)
T PF08389_consen 2 PFIRNKLAQVLAEIAKRDWPQQ-WPDFLEDLLQLLQSS-PQHLELVLRILRILPEEITD-------------FRRSSLSQ 66 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTT-STTHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHT-------------SHCCHSHH
T ss_pred hhHHHHHHHHHHHHHHHHChhh-CchHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHh-------------hhchhhhH
Confidence 3578889999999988764443 778888888887763 45555666666665544322 0011 122
Q ss_pred HHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCC----cHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHh
Q psy14014 260 RVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDS----EAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDL 335 (615)
Q Consensus 260 ~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~----~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~ 335 (615)
..|...-..+..- .+.++..+.+.+... ..++...+++++..+...++.+. .....+++.+.+.
T Consensus 67 ~r~~~l~~~l~~~---------~~~i~~~l~~~l~~~~~~~~~~~~~~~L~~l~s~i~~~~~~~---i~~~~~l~~~~~~ 134 (148)
T PF08389_consen 67 ERRRELKDALRSN---------SPDILEILSQILSQSSSEANEELVKAALKCLKSWISWIPIEL---IINSNLLNLIFQL 134 (148)
T ss_dssp HHHHHHHHHHHHH---------HHHHHHHHHHHHHHHCHCCHHHHHHHHHHHHHHHTTTS-HHH---HHSSSHHHHHHHH
T ss_pred HHHHHHHHHHHHH---------HHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHhCCHHH---hccHHHHHHHHHH
Confidence 3344444333332 234555555555433 27889999999999988665442 1223477777777
Q ss_pred hCCCCHHHHHHHHHHH
Q psy14014 336 VADPNQHVKSALASVI 351 (615)
Q Consensus 336 ~~d~~~~vR~~~~~~l 351 (615)
+++++- |..|+++|
T Consensus 135 l~~~~~--~~~A~~cl 148 (148)
T PF08389_consen 135 LQSPEL--REAAAECL 148 (148)
T ss_dssp TTSCCC--HHHHHHHH
T ss_pred cCCHHH--HHHHHHhC
Confidence 755443 66665543
No 217
>cd03569 VHS_Hrs_Vps27p VHS domain family, Hrs and Vps27p subfamily; composed of Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and its yeast homolog Vps27p (vacuolar protein sorting). The VHS domain, an essential part of Hrs/Vps27p, has a superhelical structure similar to the structure of ARM (Armadillo) repeats and is present at the N-termini of proteins. Hrs also contains a FYVE (Fab1p, YOTB, Vac1p, and EEA1) zinc finger domain C-terminal to VHS, as well as two coiled-coil domains. Hrs has been proposed to play a role in at least three vesicle trafficking events: exocytosis, endocytosis, and endosome to lysosome trafficking. Hrs is involved in promoting rapid recycling of endocytosed signaling receptors to the plasma membrane.
Probab=93.84 E-value=2.2 Score=35.67 Aligned_cols=102 Identities=13% Similarity=0.186 Sum_probs=73.8
Q ss_pred cCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHH
Q psy14014 254 SGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVK 333 (615)
Q Consensus 254 ~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~ 333 (615)
+.+++|..-..++..+.. ......+.+-.+.+.+++.++.+...|+..|..+.++++.....+.....++..+.
T Consensus 17 l~~~dw~~ileicD~In~------~~~~~k~a~ral~krl~~~n~~vql~AL~LLe~~vkNCG~~fh~evas~~fl~~l~ 90 (142)
T cd03569 17 LGEPDLASILEICDMIRS------KDVQPKYAMRALKKRLLSKNPNVQLYALLLLESCVKNCGTHFHDEVASREFMDELK 90 (142)
T ss_pred cCccCHHHHHHHHHHHhC------CCCCHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHCCHHHHHHHhhHHHHHHHH
Confidence 345777655544444332 11234577888889999999999999999999999999877665555566777777
Q ss_pred HhhC-CCCHHHHHHHHHHHHhhchhhcch
Q psy14014 334 DLVA-DPNQHVKSALASVIMGLSPILGKH 361 (615)
Q Consensus 334 ~~~~-d~~~~vR~~~~~~l~~l~~~~g~~ 361 (615)
+++. ..++.||.-++..+..-+..++.+
T Consensus 91 ~l~~~~~~~~Vk~kil~li~~W~~~f~~~ 119 (142)
T cd03569 91 DLIKTTKNEEVRQKILELIQAWALAFRNK 119 (142)
T ss_pred HHHcccCCHHHHHHHHHHHHHHHHHhCCC
Confidence 7665 567889988888887777766544
No 218
>PF12054 DUF3535: Domain of unknown function (DUF3535); InterPro: IPR022707 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is typically between 439 to 459 amino acids in length. This domain is found associated with PF00271 from PFAM, PF02985 from PFAM, and PF00176 from PFAM. This domain has two completely conserved residues (P and K) that may be functionally important.
Probab=93.74 E-value=9.1 Score=39.14 Aligned_cols=74 Identities=16% Similarity=0.133 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChh--h--HHHHHHHHHHHhC
Q psy14014 104 TVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAG--V--KAELRSHFRNLCQ 177 (615)
Q Consensus 104 ~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~--~--~~~l~~~l~~l~~ 177 (615)
-..|..|+.+|+.++.+++.......+-+.+....++.+...|..++-++...+...... . ...+.+.+...+.
T Consensus 101 ~r~Ri~aA~ALG~l~~~~~~~~~~~~~~~~L~~~L~S~sa~qR~~aalvl~ewa~~~~~~~~~~~~~~l~~~L~~~L~ 178 (441)
T PF12054_consen 101 IRARIAAAKALGLLLSYWPESSLQEIFQPLLLPYLNSPSATQRLLAALVLEEWAKACKERNPSPPPQALSPRLLEILE 178 (441)
T ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhCccccCCccHHHHHHHHHHHHc
Confidence 456778888888888888776666666666666677777777777766666554443211 1 2344455555555
No 219
>KOG0946|consensus
Probab=93.73 E-value=11 Score=40.15 Aligned_cols=213 Identities=15% Similarity=0.100 Sum_probs=117.4
Q ss_pred CCCCCCCCcchHHHHHHHhcCc-cHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCC--cHHHHHHHHHHhccccC
Q psy14014 4 SDSAPDDSLYPIAVLIDELKNE-DVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYD--EDEVLLALAEQLGTFTP 80 (615)
Q Consensus 4 ~~~~~~~~~~~i~~ll~~l~s~-d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~--~~~vr~~a~~~l~~l~~ 80 (615)
++++.+..-..|..+.+...+. =+.-|..|++.|..+++.+-.+.....+-|++.-+-.| +.+....+...+-.+..
T Consensus 13 q~~k~~s~aETI~kLcDRvessTL~eDRR~A~rgLKa~srkYR~~Vga~Gmk~li~vL~~D~~D~E~ik~~LdTl~il~~ 92 (970)
T KOG0946|consen 13 QPPKQQSAAETIEKLCDRVESSTLLEDRRDAVRGLKAFSRKYREEVGAQGMKPLIQVLQRDYMDPEIIKYALDTLLILTS 92 (970)
T ss_pred CCCccccHHhHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHhhccCCHHHHHHHHHHHHHHHh
Confidence 4455556667899999988764 44579999999999998765554445555555544433 22333333322222211
Q ss_pred CCCCcchhhhchHHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHH-hhhHHHHHHHhhcCCCcchhhhHHhhhhhhccC
Q psy14014 81 NVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDL-EAHFVPLVQRLASGDWFTSRTSACGLFSVCYPR 159 (615)
Q Consensus 81 ~~~~~~~~~~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~-~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~ 159 (615)
.++.+.|-+-.. .-..++.++.+..+ .+..+..+.......++.+|..++.++..+...
T Consensus 93 -------------------~dd~~~v~dds~-qsdd~g~~iae~fik~qd~I~lll~~~e~~DF~VR~~aIqLlsalls~ 152 (970)
T KOG0946|consen 93 -------------------HDDSPEVMDDST-QSDDLGLWIAEQFIKNQDNITLLLQSLEEFDFHVRLYAIQLLSALLSC 152 (970)
T ss_pred -------------------cCcchhhcccch-hhhHHHHHHHHHHHcCchhHHHHHHHHHhhchhhhhHHHHHHHHHHhc
Confidence 111111111111 11122222222111 123444555555555677777777777777777
Q ss_pred CChhhHHHHH------HHHHHHhCCCChHHHHHHHHhHHHHHHHhch---hhhHhhhHHHHHHhhccC----chhHHHHH
Q psy14014 160 VTAGVKAELR------SHFRNLCQDDTPMVRRAAAGKLGELAKVVEV---DYLKTDIIPMFVNLAQDE----QDSVRLLA 226 (615)
Q Consensus 160 ~~~~~~~~l~------~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~---~~~~~~ll~~l~~~~~d~----~~~vr~~a 226 (615)
.+.+.+.-++ ..++.++.|....+|..++-.|.++.+..+. -...+.++.-+..++..+ -..|-.-|
T Consensus 153 r~~e~q~~ll~~P~gIS~lmdlL~DsrE~IRNe~iLlL~eL~k~n~~IQKlVAFENaFerLfsIIeeEGg~dGgIVveDC 232 (970)
T KOG0946|consen 153 RPTELQDALLVSPMGISKLMDLLRDSREPIRNEAILLLSELVKDNSSIQKLVAFENAFERLFSIIEEEGGLDGGIVVEDC 232 (970)
T ss_pred CCHHHHHHHHHCchhHHHHHHHHhhhhhhhchhHHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHH
Confidence 6665554433 2456778898889999999988888875443 112233444444444322 23566667
Q ss_pred HHHHHHHHhh
Q psy14014 227 VEACVSIASL 236 (615)
Q Consensus 227 ~~~l~~l~~~ 236 (615)
+..+..+.+.
T Consensus 233 L~ll~NLLK~ 242 (970)
T KOG0946|consen 233 LILLNNLLKN 242 (970)
T ss_pred HHHHHHHHhh
Confidence 7766666554
No 220
>PF03224 V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004908 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. This entry represents subunit H (also known as Vma13p) found in the V1 complex of V-ATPases. This subunit has a regulatory function, being responsible for activating ATPase activity and coupling ATPase activity to proton flow []. The yeast enzyme contains five motifs similar to the HEAT or Armadillo repeats seen in the importins, and can be divided into two distinct domains: a large N-terminal domain consisting of stacked alpha helices, and a smaller C-terminal alpha-helical domain with a similar superhelical topology to an armadillo repeat []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0046961 proton-transporting ATPase activity, rotational mechanism, 0015991 ATP hydrolysis coupled proton transport, 0000221 vacuolar proton-transporting V-type ATPase, V1 domain; PDB: 1HO8_A.
Probab=93.53 E-value=7.9 Score=37.71 Aligned_cols=147 Identities=14% Similarity=0.100 Sum_probs=79.0
Q ss_pred HHHHhcCCCChHHHHHHHHHHHHHHHHhCccchh--hhHHHHHHHhhcC----CcHHHHHHHHHHHHHHHhhccccchhH
Q psy14014 249 TLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITK--TDLVQAFQMLLKD----SEAEVRAAAANKVRDFCQNLDAYNQEN 322 (615)
Q Consensus 249 ~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~--~~l~~~l~~~l~d----~~~~vr~~a~~~l~~~~~~~~~~~~~~ 322 (615)
.+.++++.+++.+...++..+..+....+..... .++++.+.+.+++ ++.+++..++.++..++.. +..+..
T Consensus 109 ~fl~ll~~~D~~i~~~a~~iLt~Ll~~~~~~~~~~~~~~l~~ll~~L~~~l~~~~~~~~~~av~~L~~LL~~--~~~R~~ 186 (312)
T PF03224_consen 109 PFLKLLDRNDSFIQLKAAFILTSLLSQGPKRSEKLVKEALPKLLQWLSSQLSSSDSELQYIAVQCLQNLLRS--KEYRQV 186 (312)
T ss_dssp HHHHH-S-SSHHHHHHHHHHHHHHHTSTTT--HHHHHHHHHHHHHHHH-TT-HHHH---HHHHHHHHHHHTS--HHHHHH
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhCc--chhHHH
Confidence 3444777789999999999988888765544322 2566666666554 4566778888999888762 333332
Q ss_pred HHHHhhHHHHHHhh-----CC--CCHHHHHHHHHHHHhhc--hhhcchhhhhhhHHHHHHhhcCC-ChhHHHHHHHhhhH
Q psy14014 323 IIMTYILPYVKDLV-----AD--PNQHVKSALASVIMGLS--PILGKHNTVDHLLPLFLSQLKDE-CPEVRLNIISNLDC 392 (615)
Q Consensus 323 ~~~~~l~p~l~~~~-----~d--~~~~vR~~~~~~l~~l~--~~~g~~~~~~~l~p~l~~~l~d~-~~~vr~~a~~~l~~ 392 (615)
.+....++.+..++ .+ .+.++.-.++-++..++ ...-.......++|.+.+.+++. -+.|-+-++..+..
T Consensus 187 f~~~~~v~~l~~iL~~~~~~~~~~~~Ql~Y~~ll~lWlLSF~~~~~~~~~~~~~i~~L~~i~~~~~KEKvvRv~la~l~N 266 (312)
T PF03224_consen 187 FWKSNGVSPLFDILRKQATNSNSSGIQLQYQALLCLWLLSFEPEIAEELNKKYLIPLLADILKDSIKEKVVRVSLAILRN 266 (312)
T ss_dssp HHTHHHHHHHHHHHH---------HHHHHHHHHHHHHHHTTSHHHHHHHHTTSHHHHHHHHHHH--SHHHHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHhhcccCCCCchhHHHHHHHHHHHHhcCHHHHHHHhccchHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 33344555555555 22 23344444444444432 11111222334888888888763 34555555556655
Q ss_pred hhhhh
Q psy14014 393 VNEVI 397 (615)
Q Consensus 393 l~~~~ 397 (615)
++...
T Consensus 267 l~~~~ 271 (312)
T PF03224_consen 267 LLSKA 271 (312)
T ss_dssp TTSSS
T ss_pred HHhcc
Confidence 55443
No 221
>KOG2213|consensus
Probab=93.30 E-value=8.5 Score=37.41 Aligned_cols=68 Identities=18% Similarity=0.109 Sum_probs=38.7
Q ss_pred HHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcC
Q psy14014 182 MVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSG 255 (615)
Q Consensus 182 ~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~ 255 (615)
.-++.+.+.++.+.++++.- -...+..-..++.|.+-.||..|+.-|..+|.. ...+.+.+.+.++++
T Consensus 39 k~k~lasq~ip~~fk~fp~l--a~~a~da~~d~~ed~d~~ir~qaik~lp~fc~~----d~~~rv~d~l~qLLn 106 (460)
T KOG2213|consen 39 KEKRLASQFIPRFFKHFPSL--ADEAIDAQLDLCEDDDVGIRRQAIKGLPLFCKG----DALSRVNDVLVQLLN 106 (460)
T ss_pred HHHHHHHHHHHHHHhhCchh--hhHHHHhhhccccccchhhHHHHHhccchhccC----chhhhhHHHHHHHHH
Confidence 34455566666666665431 123344445566677777777777777666654 334455555555554
No 222
>KOG2081|consensus
Probab=93.27 E-value=11 Score=38.59 Aligned_cols=146 Identities=13% Similarity=0.127 Sum_probs=97.3
Q ss_pred CchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcC--C
Q psy14014 441 KWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRD--Q 518 (615)
Q Consensus 441 ~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d--~ 518 (615)
....|....+.+..++...|.......+.-.+.. +.+.|+.-++++..+..+++.+.++ .+.++|.+++.+.. .
T Consensus 365 f~~fR~~v~dvl~Dv~~iigs~e~lk~~~~~l~e--~~~~We~~EAaLF~l~~~~~~~~~~--e~~i~pevl~~i~nlp~ 440 (559)
T KOG2081|consen 365 FFEFRLKVGDVLKDVAFIIGSDECLKQMYIRLKE--NNASWEEVEAALFILRAVAKNVSPE--ENTIMPEVLKLICNLPE 440 (559)
T ss_pred HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHcc--CCCchHHHHHHHHHHHHHhccCCcc--ccchHHHHHHHHhCCcc
Confidence 3557888899999988888876543333222222 4678999999999999999998765 34688888875432 2
Q ss_pred CchHHHHHHHHHHHHHhhhChh-hHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhh--hhHHhhHHHHHhhh
Q psy14014 519 NYLHRMTCLFCINVLAEACGPT-VTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILET--NVIQSQVKPALDKL 592 (615)
Q Consensus 519 ~~~~R~~a~~~l~~l~~~~~~~-~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~--~~~~~~~~~~l~~l 592 (615)
...+|..++.-+|.+.+..... .+.+.++..+...+.+.. ....++.++..++..+.. ....+++..+...+
T Consensus 441 Q~~~~~ts~ll~g~~~ew~~~~p~~le~v~~~~~~~~~~~~--~as~~a~~~~~i~~~c~~~~~~l~~~~~~l~~~l 515 (559)
T KOG2081|consen 441 QAPLRYTSILLLGEYSEWVEQHPELLEPVLRYIRQGLQLKR--LASAAALAFHRICSACRVQMTCLIPSLLELIRSL 515 (559)
T ss_pred chhHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhhhcc--hhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 4459999999999998876542 234455555566565554 555666777777665532 23344555555444
No 223
>PF11701 UNC45-central: Myosin-binding striated muscle assembly central; InterPro: IPR024660 The UNC-45 or small muscle protein 1 of Caenorhabditis elegans is expressed in two forms from different genomic positions in mammals: as a general tissue protein (UNC-45a) and as a specific form (UNC-45b) expressed only in striated and skeletal muscle. Myofibril formation requires both UNC-45 forms, consistent with the fact that the cytoskeleton is necessary for the development and maintenance of organised myofibrils []. Rng3 (Ring assembly protein 3), the homologue in Schizosaccharomyces pombe, is crucial for cell shape, normal actin cytoskeleton, and contractile ring assembly, and is essential for assembly of the myosin II-containing progenitors of the contractile ring. Widespread defects in the cytoskeleton are found in null mutants of all three fungal proteins []. Mammalian Unc45 is found to act as a specific chaperone during the folding of myosin and the assembly of striated muscle by forming a stable complex with the general chaperone Hsp90 []. All members carry up to three amino-terminal tetratricopeptide repeat (TPR) and a UCS domain at the C terminus that contains a number of Arm repeats. ; PDB: 3OPB_A 3NOW_A.
Probab=93.12 E-value=0.44 Score=40.82 Aligned_cols=130 Identities=15% Similarity=0.174 Sum_probs=79.1
Q ss_pred CchhHHHHHHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhh-----HHHHHHHHHHH
Q psy14014 101 VEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGV-----KAELRSHFRNL 175 (615)
Q Consensus 101 ~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~-----~~~l~~~l~~l 175 (615)
...+++|..+.-++.++. ...++...+.+..++.....+........+...+..+++..++-. .+.+++.+..+
T Consensus 16 ~~~~~~r~~a~v~l~k~l-~~~~~~~~~~~~~~i~~~~~~~~~d~~i~~~~~l~~lfp~~~dv~~~l~~~eg~~~~l~~~ 94 (157)
T PF11701_consen 16 RQPEEVRSHALVILSKLL-DAAREEFKEKISDFIESLLDEGEMDSLIIAFSALTALFPGPPDVGSELFLSEGFLESLLPL 94 (157)
T ss_dssp TTSCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHCTTTHHHHHHHCCTTTHHHHHHHH
T ss_pred CCCHhHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHccccchhHHHHHHHHHHHhCCCHHHHHHHHhhhhHHHHHHHH
Confidence 457789999999888886 333345566677777777666555566667777777777664321 24455666666
Q ss_pred hC--CCChHHHHHHHHhHHHHHHHh-chhhhHhhhHHHHHHhhc-cCchh-HHHHHHHHHH
Q psy14014 176 CQ--DDTPMVRRAAAGKLGELAKVV-EVDYLKTDIIPMFVNLAQ-DEQDS-VRLLAVEACV 231 (615)
Q Consensus 176 ~~--d~~~~vR~~a~~~l~~l~~~~-~~~~~~~~ll~~l~~~~~-d~~~~-vr~~a~~~l~ 231 (615)
+. .++..+...+++.+..=|..- ..........+.+.+..+ ++++. +|..|.-.|.
T Consensus 95 ~~~~~~~~~~~~~~lell~aAc~d~~~r~~I~~~~~~~L~~~~~~~~~~~~ir~~A~v~L~ 155 (157)
T PF11701_consen 95 ASRKSKDRKVQKAALELLSAACIDKSCRTFISKNYVSWLKELYKNSKDDSEIRVLAAVGLC 155 (157)
T ss_dssp HH-CTS-HHHHHHHHHHHHHHTTSHHHHHCCHHHCHHHHHHHTTTCC-HH-CHHHHHHHHH
T ss_pred HhcccCCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccchHHHHHHHHHHHh
Confidence 66 567777777777765543211 112234456677777774 44444 6766655543
No 224
>KOG2149|consensus
Probab=93.08 E-value=1.6 Score=42.45 Aligned_cols=108 Identities=16% Similarity=0.150 Sum_probs=71.9
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHHHHhChHHh--hhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhh---HHHhh
Q psy14014 472 CMTWLVDHVYAIREAATLNLKKLVEQFGSEWA--QSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTV---TANFL 546 (615)
Q Consensus 472 l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~--~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~---~~~~i 546 (615)
++..+.+.+..||..|+..+.++......... ...+++.+..+..|.+..+|......+..++....+.. +..-+
T Consensus 63 Ll~qlkHhNakvRkdal~glkd~l~s~p~~l~~~~~~ll~~~~~~i~D~~~~vR~~~~qll~~~i~~~~~e~~sp~~~l~ 142 (393)
T KOG2149|consen 63 LLSQLKHHNAKVRKDALNGLKDLLKSHPAELQSHLYALLQKLRELILDDDSLVRDALYQLLDSLILPACKEDQSPMVSLL 142 (393)
T ss_pred HHhhhcCchHhhhHHHHHHHHHHHHhChHHHHHHHHHHHHHhhhhhcCccccHHHHHHHHHHHHHhhcchhhhcchHHHH
Confidence 45556777888888888887777766222211 12355666667778888888888777777665544333 23456
Q ss_pred HHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhh
Q psy14014 547 LPTVLNMAGDNVANVRFNVAKTLQKIGPILETN 579 (615)
Q Consensus 547 ~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~ 579 (615)
+|.+...+....+.+|.-+..-+..+...+++.
T Consensus 143 ~~yi~~AMThit~~i~~dslkfL~~Ll~~~~p~ 175 (393)
T KOG2149|consen 143 MPYISSAMTHITPEIQEDSLKFLSLLLERYPDT 175 (393)
T ss_pred HHHHHHHHhhccHHHHHhhHHHHHHHHHHcChH
Confidence 677777777778888888888888777777543
No 225
>PF08623 TIP120: TATA-binding protein interacting (TIP20); InterPro: IPR013932 TIP120 (also known as cullin-associated and neddylation-dissociated protein 1) is a TATA binding protein interacting protein that enhances transcription []. ; PDB: 4A0C_A 1U6G_C.
Probab=92.96 E-value=0.74 Score=39.45 Aligned_cols=75 Identities=23% Similarity=0.211 Sum_probs=54.4
Q ss_pred CcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhhH--HHhhHHHHHhh
Q psy14014 478 DHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVT--ANFLLPTVLNM 553 (615)
Q Consensus 478 d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~--~~~i~~~l~~~ 553 (615)
|.-.++|.+|.+++..+...+........+++.+...+.| +..+|.-+...+..++...+.... .+.+.+.+.+.
T Consensus 38 DDGLelRK~ayE~lytlLd~~~~~~~~~~~~~~v~~GL~D-~~DIk~L~~~~l~kl~~~~p~~v~~~Ld~l~~~l~~~ 114 (169)
T PF08623_consen 38 DDGLELRKAAYECLYTLLDTCLSRIDISEFLDRVEAGLKD-EHDIKMLCHLMLSKLAQLAPEEVLQRLDSLVEPLRKT 114 (169)
T ss_dssp EGGGHHHHHHHHHHHHHHHSTCSSS-HHHHHHHHHHTTSS--HHHHHHHHHHHHHHHHS-HHHHHHCCTTTHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHhhcCC-cHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 6678999999999999999765443345578889999999 999999999999999866544332 23444545443
No 226
>PF10521 DUF2454: Protein of unknown function (DUF2454); InterPro: IPR018870 Putative protein of unknown function; subunit of the ASTRA complex which is part of the chromatin remodeling machinery; similar to Schizosaccharomyces pombe (Fission yeast) Tti2p; may interact with Rsm23p [].
Probab=92.88 E-value=2.7 Score=40.18 Aligned_cols=135 Identities=15% Similarity=0.173 Sum_probs=78.6
Q ss_pred hHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhh---HH-----HhHHHHHHHhcC--------CCChHHHHHHH
Q psy14014 203 LKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSD---VE-----QLVMPTLRQCSG--------DTSWRVRYMVA 266 (615)
Q Consensus 203 ~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~---~~-----~~l~~~l~~~~~--------d~~~~vR~~~~ 266 (615)
.+..++|.+..++.|.+..+|..++.++..+...++... +. +.+.+.+..++. +++..+=..+.
T Consensus 116 ~~~liiP~iL~llDD~~~~~K~~G~~lL~~ll~~~~~~~~~~L~~tGl~~v~~~al~~~L~~LP~~tp~~~s~~Ll~~ay 195 (282)
T PF10521_consen 116 HWPLIIPPILNLLDDYSPEIKIQGCQLLHHLLEKVPAAEWDILRRTGLFSVFEDALFPCLYYLPPITPEDESLELLQAAY 195 (282)
T ss_pred hhhHHHhhHHHHhcCCCHHHHHHHHHHHHHHHHhCChhhhHHHHHcChHHHHHHHHHHHhhcCCCCCCchhhHHHHHHHH
Confidence 466677777777777777778777777777777666544 22 123333444433 55666666666
Q ss_pred HHHHHHHHHhCcc---chhhhHHHH----HHHhh----cCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHh
Q psy14014 267 DKFTDLQKAVGPE---ITKTDLVQA----FQMLL----KDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDL 335 (615)
Q Consensus 267 ~~l~~l~~~~~~~---~~~~~l~~~----l~~~l----~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~ 335 (615)
.++-.+......+ .....+... ++..+ +-+.+.++...++.+..++..++.... .++..++|.+.+.
T Consensus 196 ~~L~~L~~~~~~~~~~~r~~~l~~~l~e~IL~~~~~~~~~~~~~l~~~ll~~l~~~i~~lGi~~~--~hL~rii~~l~~~ 273 (282)
T PF10521_consen 196 PALLSLLKTQENDDSNPRSTWLDKILREGILSSMEHESSFSYPRLRTVLLQQLPPIIDELGISSV--KHLQRIIPVLSQI 273 (282)
T ss_pred HHHHHHHHhhccCCcccchHHHHHHHHHHHhhhceeccccCchhHHHHHHHHHHHHHHHhccHHH--HHHHHHHHHHHHH
Confidence 6666665442111 111111111 22222 123578888888888888887765432 3566777777776
Q ss_pred hCCC
Q psy14014 336 VADP 339 (615)
Q Consensus 336 ~~d~ 339 (615)
+.++
T Consensus 274 l~np 277 (282)
T PF10521_consen 274 LENP 277 (282)
T ss_pred hcCC
Confidence 6654
No 227
>PF14868 DUF4487: Domain of unknown function (DUF4487)
Probab=92.81 E-value=14 Score=38.69 Aligned_cols=74 Identities=9% Similarity=0.098 Sum_probs=48.4
Q ss_pred hHHHHHHHhh-cCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchh
Q psy14014 284 DLVQAFQMLL-KDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPI 357 (615)
Q Consensus 284 ~l~~~l~~~l-~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~ 357 (615)
+++-.+..++ .++...+|.+.+..++.+++..-++...+...+.+.-.+.-++.|.+|-+++.++++++.+++.
T Consensus 479 qv~~~l~~l~~~~pp~~~kl~~~~FLs~lg~~~i~~~~q~~~~~~Ls~Lf~~LL~d~~Wll~q~ALeAF~~FAe~ 553 (559)
T PF14868_consen 479 QVLTELTSLFKSEPPDHVKLALLDFLSSLGKLFIPESDQNPVSPALSELFHMLLADRHWLLHQHALEAFGQFAER 553 (559)
T ss_pred HHHHHHHHHHhhCCCccchHHHHHHHHHhccccCCccccchhhhHHHHHHHHHhcCCcHHHHHHHHHHHHHHhcc
Confidence 4444455555 4455568888888888888766554433333444444445567888888888888888877764
No 228
>PF12830 Nipped-B_C: Sister chromatid cohesion C-terminus
Probab=92.60 E-value=4.4 Score=35.90 Aligned_cols=72 Identities=18% Similarity=0.166 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcC
Q psy14014 165 KAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLS 238 (615)
Q Consensus 165 ~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~ 238 (615)
.+..++.+++++.+++..+|..+++.+..+.+..-- .....+|.+..+..|+++.+|..|...+..+.+.-+
T Consensus 6 ~Qryl~~Il~~~~~~~~~vr~~Al~~l~~il~qGLv--nP~~cvp~lIAL~ts~~~~ir~~A~~~l~~l~eK~~ 77 (187)
T PF12830_consen 6 VQRYLKNILELCLSSDDSVRLAALQVLELILRQGLV--NPKQCVPTLIALETSPNPSIRSRAYQLLKELHEKHE 77 (187)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCCC--ChHHHHhHhhhhhCCCChHHHHHHHHHHHHHHHHhH
Confidence 344556677888999999999999999988764321 124688999999999999999999999998876544
No 229
>KOG0803|consensus
Probab=92.58 E-value=23 Score=41.14 Aligned_cols=93 Identities=14% Similarity=0.152 Sum_probs=52.9
Q ss_pred chhHHHHHHHHHHHHHhhcChhhH---HHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccch--hhhHHHHHHHhh
Q psy14014 219 QDSVRLLAVEACVSIASLLSQSDV---EQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEIT--KTDLVQAFQMLL 293 (615)
Q Consensus 219 ~~~vr~~a~~~l~~l~~~~~~~~~---~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~--~~~l~~~l~~~l 293 (615)
+...|.-|++.+.++......+.. .+.....+.+++.|.+..||...-..+..+...+++... ...++|...-..
T Consensus 54 D~~TK~KaL~eL~eli~~~~~e~~~~il~~w~~i~~kl~~d~~~~VR~~t~~v~s~l~t~lkk~lsp~LK~li~~wl~~~ 133 (1312)
T KOG0803|consen 54 DETTKIKALQELSELIDTSDTEELKGILPEWLVIYAKLIIDEDRTVRLLTHDVFSKLLTKLKKKLSPFLKSLIPPWLGGQ 133 (1312)
T ss_pred ChHHHHHHHHhHHHhcccccchHHhhhHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHhhHHHHhhhhhhhhee
Confidence 344455555555555544443322 222333445667777777777777777776666554432 234666666666
Q ss_pred cCCcHHHHHHHHHHHHHH
Q psy14014 294 KDSEAEVRAAAANKVRDF 311 (615)
Q Consensus 294 ~d~~~~vr~~a~~~l~~~ 311 (615)
.|.+..|-.+|...+...
T Consensus 134 ~d~~~~vs~aa~~sf~~~ 151 (1312)
T KOG0803|consen 134 FDLDYPVSEAAKASFKDG 151 (1312)
T ss_pred cccchHHHHHHHHHHHhh
Confidence 677777766666665543
No 230
>PF01603 B56: Protein phosphatase 2A regulatory B subunit (B56 family); InterPro: IPR002554 Protein phosphatase 2A (PP2A) is a major intracellular protein phosphatase that regulates multiple aspects of cell growth and metabolism. The ability of this widely distributed heterotrimeric enzyme to act on a diverse array of substrates is largely controlled by the nature of its regulatory B subunit. There are multiple families of B subunits, this family is called the B56 family [].; GO: 0008601 protein phosphatase type 2A regulator activity, 0007165 signal transduction, 0000159 protein phosphatase type 2A complex; PDB: 2NYM_B 2NYL_B 2IAE_E 2NPP_B 3FGA_B 2JAK_A.
Probab=92.57 E-value=13 Score=37.69 Aligned_cols=226 Identities=11% Similarity=0.111 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhch--hhhHhhhHHHHHHhhcc-CchhHHHHHHHHHHHHHhhcC---
Q psy14014 165 KAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEV--DYLKTDIIPMFVNLAQD-EQDSVRLLAVEACVSIASLLS--- 238 (615)
Q Consensus 165 ~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~--~~~~~~ll~~l~~~~~d-~~~~vr~~a~~~l~~l~~~~~--- 238 (615)
-..++..+..++..+|++-|......+..+...... ......+...+.+++.+ ....--...++.++.+...+.
T Consensus 131 ~~~fi~~Ll~l~~S~D~rER~~lk~~l~~iy~k~~~~r~~Ir~~i~~~~~~fi~e~~~~~gI~elLeil~sii~gf~~pl 210 (409)
T PF01603_consen 131 DQKFIKKLLELFDSPDPRERDYLKTILHRIYGKFPNLRSFIRKSINNIFYRFIYETERHNGIAELLEILGSIINGFAVPL 210 (409)
T ss_dssp -HHHHHHHHHTTTSSTHHHHHHHHHHHHHHHHH-TTTHHHHHHHHHHHHHHHHHTTS--STHHHHHHHHHHHHTT--SS-
T ss_pred CHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCcccccCHHHHHHHHHHHHhccCCCC
Confidence 345566677888999999999999988887665433 23344555566666543 333444556777777777654
Q ss_pred hhhHHHhHHHHHHHhcCCCChH-HHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccc
Q psy14014 239 QSDVEQLVMPTLRQCSGDTSWR-VRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDA 317 (615)
Q Consensus 239 ~~~~~~~l~~~l~~~~~d~~~~-vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~ 317 (615)
++.....+...+.-+.+.+... .-.....++..+...-+. ....++..+++.---.++.=....+.-+..++..+++
T Consensus 211 k~eh~~fl~~vllPLh~~~~~~~y~~~L~~~~~~f~~kdp~--l~~~~i~~llk~WP~t~s~Kev~FL~el~~il~~~~~ 288 (409)
T PF01603_consen 211 KEEHKQFLRKVLLPLHKSPHLSSYHQQLSYCVVQFLEKDPS--LAEPVIKGLLKHWPKTNSQKEVLFLNELEEILEVLPP 288 (409)
T ss_dssp -HHHHHHHHHTTGGGGGSTGGGGTHHHHHHHHHHHHHH-GG--GHHHHHHHHHHHS-SS-HHHHHHHHHHHHHHHTT--H
T ss_pred cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhCch--hHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhcCH
Confidence 2222233333333333333321 233444444444432110 1122333333333334443334556667777776654
Q ss_pred cchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhh--chhhcchhhhhhhHHHHHHhhcC---C--ChhHHHHHHHhh
Q psy14014 318 YNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGL--SPILGKHNTVDHLLPLFLSQLKD---E--CPEVRLNIISNL 390 (615)
Q Consensus 318 ~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l--~~~~g~~~~~~~l~p~l~~~l~d---~--~~~vr~~a~~~l 390 (615)
+.. ..+...++..+.+++++++.+|-..|+..+.+- ...+. .....++|.+...+.. . +..||..+..++
T Consensus 289 ~~f-~~i~~~lf~~la~ci~S~h~qVAErAl~~w~n~~~~~li~--~~~~~i~p~i~~~L~~~~~~HWn~~Vr~~a~~vl 365 (409)
T PF01603_consen 289 EEF-QKIMVPLFKRLAKCISSPHFQVAERALYFWNNEYFLSLIS--QNSRVILPIIFPALYRNSKNHWNQTVRNLAQNVL 365 (409)
T ss_dssp HHH-HHHHHHHHHHHHHHHTSSSHHHHHHHHGGGGSHHHHHHHH--CTHHHHHHHHHHHHSSTTSS-SSTTHHHHHHHHH
T ss_pred HHH-HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHCCHHHHHHHH--hChHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 432 245666788888899999999987776654322 22221 1223456666665432 2 457999988888
Q ss_pred hHhhh
Q psy14014 391 DCVNE 395 (615)
Q Consensus 391 ~~l~~ 395 (615)
..+.+
T Consensus 366 ~~l~~ 370 (409)
T PF01603_consen 366 KILME 370 (409)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 77654
No 231
>PF08064 UME: UME (NUC010) domain; InterPro: IPR012993 This domain is characteristic of UVSB PI-3 kinase, MEI-41 and ESR1 [].; GO: 0004674 protein serine/threonine kinase activity
Probab=92.52 E-value=1.6 Score=34.50 Aligned_cols=70 Identities=9% Similarity=0.069 Sum_probs=47.5
Q ss_pred CCchHHHHHHHHHHHHHhhhChhh--HHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHHHH
Q psy14014 518 QNYLHRMTCLFCINVLAEACGPTV--TANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPAL 589 (615)
Q Consensus 518 ~~~~~R~~a~~~l~~l~~~~~~~~--~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l 589 (615)
.....|..++++++.+.+.+++.. +.++++..|...+..+ ++|..+++++..++..++.+...+.+..++
T Consensus 27 ~~~~ek~~~l~si~~lI~~~~~~i~~~~pQI~a~L~sal~~~--~l~~~al~~W~~fi~~L~~~~l~~ll~~~~ 98 (107)
T PF08064_consen 27 KPIPEKKRALRSIEELIKLGGSHISSARPQIMACLQSALEIP--ELREEALSCWNCFIKTLDEEDLGPLLDQIF 98 (107)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCh--hhHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 466778888999999888444322 3455666666655554 888899999999988887655444444333
No 232
>cd03561 VHS VHS domain family; The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal Transducing Adaptor Molecule). It has a superhelical structure similar to that of the ARM (Armadillo) repeats and is present at the N-termini of proteins involved in intracellular membrane trafficking. There are four general groups of VHS domain containing proteins based on their association with other domains. The first group consists of proteins of the STAM/EAST/Hbp family which has the domain composition VHS-SH3-ITAM. The second consists of proteins with a FYVE domain C-terminal to VHS. The third consists of GGA proteins with a domain composition VHS-GAT (GGA and TOM)-GAE (gamma-adaptin ear) domain. The fourth consists of proteins with a VHS domain alone or with domains other than those mentioned above. In GGA proteins, VHS domains are involved in cargo recognition in trans-Golgi, thereby having a general me
Probab=92.51 E-value=3.4 Score=34.23 Aligned_cols=101 Identities=12% Similarity=0.130 Sum_probs=71.2
Q ss_pred cCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHH
Q psy14014 254 SGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVK 333 (615)
Q Consensus 254 ~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~ 333 (615)
..+++|..-..++..+..- .......+..+.+.+++.++.++..|+..|..+.++++...........++..+.
T Consensus 13 ~~~~D~~~il~icd~I~~~------~~~~k~a~raL~krl~~~n~~vql~AL~lLd~~vkNcg~~f~~~i~s~~fl~~l~ 86 (133)
T cd03561 13 LEEPDWALNLELCDLINLK------PNGPKEAARAIRKKIKYGNPHVQLLALTLLELLVKNCGKPFHLQVADKEFLLELV 86 (133)
T ss_pred cCCccHHHHHHHHHHHhCC------CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCChHHHHHHhhHHHHHHHH
Confidence 3457776655555444321 1234577888999999999999999999999999999876554333345555566
Q ss_pred HhhCC---CCHHHHHHHHHHHHhhchhhcc
Q psy14014 334 DLVAD---PNQHVKSALASVIMGLSPILGK 360 (615)
Q Consensus 334 ~~~~d---~~~~vR~~~~~~l~~l~~~~g~ 360 (615)
+++.. .+..||.-++..+..-...++.
T Consensus 87 ~l~~~~~~~~~~Vk~kil~ll~~W~~~f~~ 116 (133)
T cd03561 87 KIAKNSPKYDPKVREKALELILAWSESFGG 116 (133)
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 66654 4778888888888777766654
No 233
>PF08167 RIX1: rRNA processing/ribosome biogenesis
Probab=92.46 E-value=0.8 Score=39.63 Aligned_cols=107 Identities=16% Similarity=0.148 Sum_probs=71.0
Q ss_pred HHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhh---hhhhcCCcH--HHHHHHHHHhccccCCCCC-cc--
Q psy14014 15 IAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPF---LTETIYDED--EVLLALAEQLGTFTPNVGG-PE-- 86 (615)
Q Consensus 15 i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~---l~~~~~~~~--~vr~~a~~~l~~l~~~~~~-~~-- 86 (615)
...+..-++|.++..|+.++.-+.......+++.+...-.++ +...++.++ .++..++..+..+.....+ ++
T Consensus 27 ~~ri~~LL~s~~~~~rw~G~~Ll~~~~~~~~~e~l~~~~~~W~~~Ll~~L~~~~~~~~~~~ai~~L~~l~~~~~~~p~l~ 106 (165)
T PF08167_consen 27 VTRINSLLQSKSAYSRWAGLCLLKVTVEQCSWEILLSHGSQWLRALLSILEKPDPPSVLEAAIITLTRLFDLIRGKPTLT 106 (165)
T ss_pred HHHHHHHhCCCChhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCchH
Confidence 344556688999999999999999999887777443333333 333444443 4888888888887765443 22
Q ss_pred ------hhhhchHHHhhhhcCchhHHHHHHHHHHHHHHhhcCh
Q psy14014 87 ------YVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSP 123 (615)
Q Consensus 87 ------~~~~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~ 123 (615)
+.+.+++.+.++.++ ......+++++..+....+.
T Consensus 107 Rei~tp~l~~~i~~ll~l~~~--~~~~~~~l~~L~~ll~~~pt 147 (165)
T PF08167_consen 107 REIATPNLPKFIQSLLQLLQD--SSCPETALDALATLLPHHPT 147 (165)
T ss_pred HHHhhccHHHHHHHHHHHHhc--cccHHHHHHHHHHHHHHCCc
Confidence 234444455555544 56777888888888887764
No 234
>PF10521 DUF2454: Protein of unknown function (DUF2454); InterPro: IPR018870 Putative protein of unknown function; subunit of the ASTRA complex which is part of the chromatin remodeling machinery; similar to Schizosaccharomyces pombe (Fission yeast) Tti2p; may interact with Rsm23p [].
Probab=92.45 E-value=4.3 Score=38.77 Aligned_cols=138 Identities=12% Similarity=0.121 Sum_probs=86.0
Q ss_pred hHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccc---h-----hhhHHHHHHHhhc--------CCcHHHHHHH
Q psy14014 241 DVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEI---T-----KTDLVQAFQMLLK--------DSEAEVRAAA 304 (615)
Q Consensus 241 ~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~---~-----~~~l~~~l~~~l~--------d~~~~vr~~a 304 (615)
...+.++|.+..+++|.+..+|...+.++..+....+... . .+.+-+.+..++- ++...+-..+
T Consensus 115 ~~~~liiP~iL~llDD~~~~~K~~G~~lL~~ll~~~~~~~~~~L~~tGl~~v~~~al~~~L~~LP~~tp~~~s~~Ll~~a 194 (282)
T PF10521_consen 115 QHWPLIIPPILNLLDDYSPEIKIQGCQLLHHLLEKVPAAEWDILRRTGLFSVFEDALFPCLYYLPPITPEDESLELLQAA 194 (282)
T ss_pred HhhhHHHhhHHHHhcCCCHHHHHHHHHHHHHHHHhCChhhhHHHHHcChHHHHHHHHHHHhhcCCCCCCchhhHHHHHHH
Confidence 3456799999999999999999999999999987665433 1 1123334444443 5556676777
Q ss_pred HHHHHHHHhhccc---cchhHHHHHhhHHHHH-Hhh---CCCCHHHHHHHHHHHHhhchhhcchh--hhhhhHHHHHHhh
Q psy14014 305 ANKVRDFCQNLDA---YNQENIIMTYILPYVK-DLV---ADPNQHVKSALASVIMGLSPILGKHN--TVDHLLPLFLSQL 375 (615)
Q Consensus 305 ~~~l~~~~~~~~~---~~~~~~~~~~l~p~l~-~~~---~d~~~~vR~~~~~~l~~l~~~~g~~~--~~~~l~p~l~~~l 375 (615)
..++-.++..... ..+...+...+...+. .+. +-++++++...+..+..+...+|... ..+.++|.+.+.+
T Consensus 195 y~~L~~L~~~~~~~~~~~r~~~l~~~l~e~IL~~~~~~~~~~~~~l~~~ll~~l~~~i~~lGi~~~~hL~rii~~l~~~l 274 (282)
T PF10521_consen 195 YPALLSLLKTQENDDSNPRSTWLDKILREGILSSMEHESSFSYPRLRTVLLQQLPPIIDELGISSVKHLQRIIPVLSQIL 274 (282)
T ss_pred HHHHHHHHHhhccCCcccchHHHHHHHHHHHhhhceeccccCchhHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHh
Confidence 7777777664321 1111112222222111 121 22358888888888888888777633 3566778777777
Q ss_pred cCC
Q psy14014 376 KDE 378 (615)
Q Consensus 376 ~d~ 378 (615)
++.
T Consensus 275 ~np 277 (282)
T PF10521_consen 275 ENP 277 (282)
T ss_pred cCC
Confidence 664
No 235
>KOG2759|consensus
Probab=92.45 E-value=12 Score=36.89 Aligned_cols=69 Identities=12% Similarity=0.064 Sum_probs=52.4
Q ss_pred chhHHHHhhhcCCC-chHHHHHHHHHHHHHhhhChhh--H-HHhhHHHHHhhCCCCCchHHHHHHHHHHHHhH
Q psy14014 506 TVIPKVVAMSRDQN-YLHRMTCLFCINVLAEACGPTV--T-ANFLLPTVLNMAGDNVANVRFNVAKTLQKIGP 574 (615)
Q Consensus 506 ~i~~~l~~~~~d~~-~~~R~~a~~~l~~l~~~~~~~~--~-~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~ 574 (615)
.++..|..+++..+ |..=..||.=+|+..++.+... + .-.....+.++++.+|++||++|..|+..++.
T Consensus 366 ellkiL~~lLe~s~Dp~iL~VAc~DIge~Vr~yP~gk~vv~k~ggKe~vM~Llnh~d~~Vry~ALlavQ~lm~ 438 (442)
T KOG2759|consen 366 ELLKILIKLLETSNDPIILCVACHDIGEYVRHYPEGKAVVEKYGGKERVMNLLNHEDPEVRYHALLAVQKLMV 438 (442)
T ss_pred HHHHHHHHHHhcCCCCceeehhhhhHHHHHHhCchHhHHHHHhchHHHHHHHhcCCCchHHHHHHHHHHHHHh
Confidence 46777777766554 6667778888999988876543 2 22466788889999999999999999988764
No 236
>KOG2149|consensus
Probab=92.38 E-value=2.9 Score=40.74 Aligned_cols=108 Identities=15% Similarity=0.105 Sum_probs=84.5
Q ss_pred HHHhCCCChHHHHHHHHhHHHHHHHhchh--hhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhh---HHHhHH
Q psy14014 173 RNLCQDDTPMVRRAAAGKLGELAKVVEVD--YLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSD---VEQLVM 247 (615)
Q Consensus 173 ~~l~~d~~~~vR~~a~~~l~~l~~~~~~~--~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~---~~~~l~ 247 (615)
+.-+.+.+..||+.+...+-.+....+.. .....+++...++..|++..||....+.+..+.....++. ....++
T Consensus 64 l~qlkHhNakvRkdal~glkd~l~s~p~~l~~~~~~ll~~~~~~i~D~~~~vR~~~~qll~~~i~~~~~e~~sp~~~l~~ 143 (393)
T KOG2149|consen 64 LSQLKHHNAKVRKDALNGLKDLLKSHPAELQSHLYALLQKLRELILDDDSLVRDALYQLLDSLILPACKEDQSPMVSLLM 143 (393)
T ss_pred HhhhcCchHhhhHHHHHHHHHHHHhChHHHHHHHHHHHHHhhhhhcCccccHHHHHHHHHHHHHhhcchhhhcchHHHHH
Confidence 33448889999999999998887774432 2345678888888999999999999999988776666544 334577
Q ss_pred HHHHHhcCCCChHHHHHHHHHHHHHHHHhCccc
Q psy14014 248 PTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEI 280 (615)
Q Consensus 248 ~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~ 280 (615)
+++...+.+-.+.+|......+..+...+++..
T Consensus 144 ~yi~~AMThit~~i~~dslkfL~~Ll~~~~p~~ 176 (393)
T KOG2149|consen 144 PYISSAMTHITPEIQEDSLKFLSLLLERYPDTF 176 (393)
T ss_pred HHHHHHHhhccHHHHHhhHHHHHHHHHHcChHH
Confidence 888888888899999999988888888776553
No 237
>PF11698 V-ATPase_H_C: V-ATPase subunit H; InterPro: IPR011987 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. This entry represents the C-terminal domain of subunit H (also known as Vma13p) found in the V1 complex of V-ATPases. This subunit has a regulatory function, being responsible for activating ATPase activity and coupling ATPase activity to proton flow []. The yeast enzyme contains five motifs similar to the HEAT or Armadillo repeats seen in the importins, and can be divided into two distinct domains: a large N-terminal domain consisting of stacked alpha helices, and a smaller C-terminal alpha-helical domain with a similar superhelical topology to an armadillo repeat []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0016820 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, 0015991 ATP hydrolysis coupled proton transport, 0000221 vacuolar proton-transporting V-type ATPase, V1 domain; PDB: 1HO8_A.
Probab=92.38 E-value=0.57 Score=37.32 Aligned_cols=68 Identities=10% Similarity=0.088 Sum_probs=44.8
Q ss_pred hhHHHHhhh-cCCCchHHHHHHHHHHHHHhhhChhh--H-HHhhHHHHHhhCCCCCchHHHHHHHHHHHHhH
Q psy14014 507 VIPKVVAMS-RDQNYLHRMTCLFCINVLAEACGPTV--T-ANFLLPTVLNMAGDNVANVRFNVAKTLQKIGP 574 (615)
Q Consensus 507 i~~~l~~~~-~d~~~~~R~~a~~~l~~l~~~~~~~~--~-~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~ 574 (615)
++..|.+++ .+.++.+-..||.=+|.++...+... . .-.+...+.++++++|++||..|..++..++.
T Consensus 44 llk~L~~lL~~s~d~~~laVac~Dig~~vr~~p~gr~ii~~lg~K~~vM~Lm~h~d~eVr~eAL~avQklm~ 115 (119)
T PF11698_consen 44 LLKKLIKLLDKSDDPTTLAVACHDIGEFVRHYPNGRNIIEKLGAKERVMELMNHEDPEVRYEALLAVQKLMV 115 (119)
T ss_dssp HHHHHHHHH-SHHHHHHHHHHHHHHHHHHHH-GGGHHHHHHHSHHHHHHHHTS-SSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCCCcceeehhhcchHHHHHHChhHHHHHHhcChHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 455555555 23355566667777888777764432 1 13467778888899999999999999888764
No 238
>KOG2549|consensus
Probab=92.14 E-value=3.5 Score=41.88 Aligned_cols=139 Identities=14% Similarity=0.226 Sum_probs=91.3
Q ss_pred HHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCch-h--HHH-HHHHHHHHHHhhcCh----
Q psy14014 168 LRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQD-S--VRL-LAVEACVSIASLLSQ---- 239 (615)
Q Consensus 168 l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~-~--vr~-~a~~~l~~l~~~~~~---- 239 (615)
++..+...|...++..|+.|++.|.. +.-.+.++|.|..++.+.-. . .+. .-+..+..+.+.+-.
T Consensus 208 Yy~~It~a~~g~~~~~r~eAL~sL~T-------DsGL~~LlPyFv~fIae~vs~ni~~~nL~lL~~lm~m~rSLl~Np~i 280 (576)
T KOG2549|consen 208 YYKEITEACTGSDEPLRQEALQSLET-------DSGLQQLLPYFVTFIAEGVSVNIVQNNLELLIYLMRMVRSLLDNPNI 280 (576)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHhhcc-------CccHHHHHHHHHHHHhhheeeccccccHHHHHHHHHHHHHHhcCCcc
Confidence 44455666677888999998887654 33467899999999876521 1 111 112223333333322
Q ss_pred --hhHHHhHHHHHHHhc----------CCCChHHHHHHHHHHHHHHHHhCccch--hhhHHHHHHHhhcCC--cHHHHHH
Q psy14014 240 --SDVEQLVMPTLRQCS----------GDTSWRVRYMVADKFTDLQKAVGPEIT--KTDLVQAFQMLLKDS--EAEVRAA 303 (615)
Q Consensus 240 --~~~~~~l~~~l~~~~----------~d~~~~vR~~~~~~l~~l~~~~~~~~~--~~~l~~~l~~~l~d~--~~~vr~~ 303 (615)
+.+...++|.+..++ .|..|.+|..++..+..++..++.... ...+...+.+.+.|+ ....+-.
T Consensus 281 ~lepYlh~L~PSvlTCvVsk~l~~~p~~dnhwaLRDfAA~ll~~i~k~f~~~y~~L~~Rit~tl~k~l~D~~~~~st~YG 360 (576)
T KOG2549|consen 281 FLEPYLHQLVPSVLTCVVSKNLCLRPELDNHWALRDFAARLLAQICKNFSTLYNNLQPRITRTLSKALLDNKKPLSTHYG 360 (576)
T ss_pred chhhHHHHHhhHHHHhhhhhhccCCccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhcCCCCCchhhhh
Confidence 344556777776653 467899999999999999988775432 346777777777776 3566777
Q ss_pred HHHHHHHHHh
Q psy14014 304 AANKVRDFCQ 313 (615)
Q Consensus 304 a~~~l~~~~~ 313 (615)
++..|..+..
T Consensus 361 ai~gL~~lg~ 370 (576)
T KOG2549|consen 361 AIAGLSELGH 370 (576)
T ss_pred HHHHHHHhhh
Confidence 7777777665
No 239
>KOG2021|consensus
Probab=92.13 E-value=19 Score=38.42 Aligned_cols=114 Identities=15% Similarity=0.128 Sum_probs=69.4
Q ss_pred hcCCchHHHHHHHHhHHHHhhhChHh------------HHHHHHHHHHH--hcCCcchHHHHHHHHHHHHHHHHhChHHh
Q psy14014 438 EDSKWRVRLAIIEYMPLLAGQLGVEF------------FDEKLNALCMT--WLVDHVYAIREAATLNLKKLVEQFGSEWA 503 (615)
Q Consensus 438 ~~~~~~vr~~~~~~l~~l~~~~~~~~------------~~~~l~~~l~~--~l~d~~~~vR~~a~~~l~~l~~~~~~~~~ 503 (615)
+..+|..-+.++..+-.+++.+..+. ....+++.++. .+.+++..|...-.+.+....+.+..+
T Consensus 450 ~e~swqevE~Aiylly~lgE~l~~~~~~~nsgd~s~~~vl~~~~~ll~tsqv~~h~h~lVqLlfmE~ivRY~kff~~e-- 527 (980)
T KOG2021|consen 450 KEESWQEVELAIYLLYNLGECLKNNYFGLNSGDISTSQVLFLNELLLMTSQVLAHDHELVQLLFMELIVRYNKFFSTE-- 527 (980)
T ss_pred CcchHHHHHHHHHHHHHHhhccccccccccCccccHHHHHHHHHHHHHHcccccCCchHHHHHHHHHHHHHHHHHhcc--
Confidence 45789999999999988887653221 12234444443 345666666666666655544444432
Q ss_pred hhchhHHHHhh------hcCCCchHHHHHHHHHHHHHhhhChhh--HHHhhHHHHHhhC
Q psy14014 504 QSTVIPKVVAM------SRDQNYLHRMTCLFCINVLAEACGPTV--TANFLLPTVLNMA 554 (615)
Q Consensus 504 ~~~i~~~l~~~------~~d~~~~~R~~a~~~l~~l~~~~~~~~--~~~~i~~~l~~~~ 554 (615)
..-+|.++.. +.+.+.+||..+...+.++.+.+.... +.+.++..+..++
T Consensus 528 -sq~ip~vL~aFld~rglhn~ne~Vr~RawYLF~RfVKlLkkqlvpfie~iln~iqdlL 585 (980)
T KOG2021|consen 528 -SQKIPLVLNAFLDSRGLHNKNENVRLRAWYLFTRFVKLLKKQLVPFIEEILNKIQDLL 585 (980)
T ss_pred -hhhhHHHHHHHccchhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2245665553 345688999999998999887765543 3344554444444
No 240
>PF12830 Nipped-B_C: Sister chromatid cohesion C-terminus
Probab=91.88 E-value=8.7 Score=34.05 Aligned_cols=71 Identities=17% Similarity=0.170 Sum_probs=57.3
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhC
Q psy14014 466 EKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACG 538 (615)
Q Consensus 466 ~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~ 538 (615)
+..++.+++...+++..+|..|+..+..+.+. |-- -....+|.+..+..|+++.+|..|...+..+.+..+
T Consensus 7 Qryl~~Il~~~~~~~~~vr~~Al~~l~~il~q-GLv-nP~~cvp~lIAL~ts~~~~ir~~A~~~l~~l~eK~~ 77 (187)
T PF12830_consen 7 QRYLKNILELCLSSDDSVRLAALQVLELILRQ-GLV-NPKQCVPTLIALETSPNPSIRSRAYQLLKELHEKHE 77 (187)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhc-CCC-ChHHHHhHhhhhhCCCChHHHHHHHHHHHHHHHHhH
Confidence 45667778888889999999999999988874 421 123578999999999999999999999999987754
No 241
>KOG1848|consensus
Probab=91.72 E-value=16 Score=41.84 Aligned_cols=217 Identities=14% Similarity=0.121 Sum_probs=126.6
Q ss_pred hhcCchhHHHHHHHHHHHHHHhhcChhHH--hhhHHHHHHHhhcCCCc---chhhhHHhhhh----hhccCCChhhHHHH
Q psy14014 98 LATVEETVVRDKAVESLRLISAQHSPHDL--EAHFVPLVQRLASGDWF---TSRTSACGLFS----VCYPRVTAGVKAEL 168 (615)
Q Consensus 98 l~~~~~~~vr~~a~~~l~~l~~~~~~~~~--~~~~l~~l~~l~~~~~~---~~r~~a~~~l~----~~~~~~~~~~~~~l 168 (615)
....+.-+||....+++-.+.+..++..+ ...+...+......... .+-..+...+. .+.+.++......+
T Consensus 850 ~~s~~~~evr~~sl~~l~silet~ge~ll~~w~sV~eml~s~~d~~~ekek~ivrlgf~~lrlIssDfLqSLp~sci~~l 929 (1610)
T KOG1848|consen 850 DNSSRGVEVRISSLEALVSILETVGEHLLHGWQSVFEMLRSATDFGSEKEKKIVRLGFSCLRLISSDFLQSLPTSCILDL 929 (1610)
T ss_pred HhcCccceeeHHHHHHHHHHHhccchhhccccHHHHHHHHHHhhccchhhhhHHHhhhhhhhhhhhcchhcCChHHHHHH
Confidence 44566778999999999999888776433 33455555544433321 11111222222 23444556666667
Q ss_pred HHHHHHHhCC-CChHHHHHHHHhHHHHHHHhc-----------------------------hhhhHhhhHHHHHHhhccC
Q psy14014 169 RSHFRNLCQD-DTPMVRRAAAGKLGELAKVVE-----------------------------VDYLKTDIIPMFVNLAQDE 218 (615)
Q Consensus 169 ~~~l~~l~~d-~~~~vR~~a~~~l~~l~~~~~-----------------------------~~~~~~~ll~~l~~~~~d~ 218 (615)
++.+...+.. .|..+--.++..+=.+...+. ++..|-.++-.+..++.|+
T Consensus 930 idtl~~fs~QktdlNISltAi~lfWtvsDfl~~km~S~sed~~~~~~~e~~~ss~~~~~~l~e~lwi~ll~~L~~~~~ds 1009 (1610)
T KOG1848|consen 930 IDTLLVFSRQKTDLNISLTAIGLFWTVSDFLKNKMFSTSEDSCAYNSVEDLYSSMKSKEILPEVLWIMLLVHLADLCEDS 1009 (1610)
T ss_pred HHHHHHHHhhhccccccHHHHHHHHHHHHHHHhhhhccchhhhhhcchhhhcccccchhhhhhHHHHHHHHHHHHHhccc
Confidence 7766665532 344444444443322222111 1334556777788888999
Q ss_pred chhHHHHHHHHHHHHHh----hcChh----hHHHhHHHHHHHhc-C-CCChHH-------HHHHHHHHHHHHHHhCccch
Q psy14014 219 QDSVRLLAVEACVSIAS----LLSQS----DVEQLVMPTLRQCS-G-DTSWRV-------RYMVADKFTDLQKAVGPEIT 281 (615)
Q Consensus 219 ~~~vr~~a~~~l~~l~~----~~~~~----~~~~~l~~~l~~~~-~-d~~~~v-------R~~~~~~l~~l~~~~~~~~~ 281 (615)
-.+||..|++++-.+.. .++.. .+...++|++...- + -.+|.- -...+..++.+++.+..+..
T Consensus 1010 r~eVRngAvqtlfri~~Shg~~l~~~aW~s~~w~vi~pLLd~~~~q~~~ewngkeiqkqwtet~~ltisgIaklf~e~fk 1089 (1610)
T KOG1848|consen 1010 RAEVRNGAVQTLFRIFNSHGSKLGTNAWASCCWLVIMPLLDSQPIQNVSEWNGKEIQKQWTETSCLTISGIAKLFSENFK 1089 (1610)
T ss_pred hHHHhhhHHHHHHHHHhhhcccCChhHHHHHHHHHHHHHhccccccchhhhcchhHhhhhhhhhhhhHHHHHHHHHHHHH
Confidence 99999999999866543 34443 34556667664210 0 011211 23456667777766654321
Q ss_pred -----------hhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhh
Q psy14014 282 -----------KTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQN 314 (615)
Q Consensus 282 -----------~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~ 314 (615)
-+.++..+.++..|..+++..+|++++..+...
T Consensus 1090 ~llnln~f~~vwe~ll~flkrl~s~~s~e~slsai~~~qell~s 1133 (1610)
T KOG1848|consen 1090 LLLNLNGFLDVWEELLQFLKRLHSDISPEISLSAIKALQELLFS 1133 (1610)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHhcCChHhHHHHHHHHHHHHHH
Confidence 235667777788899999999999999887754
No 242
>KOG0803|consensus
Probab=91.70 E-value=5.8 Score=45.70 Aligned_cols=225 Identities=16% Similarity=0.190 Sum_probs=125.2
Q ss_pred HHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhc---cchhhhhhhcCCcH-HHHHHHHHHhccccCCCCC--cchh
Q psy14014 15 IAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRG---ELIPFLTETIYDED-EVLLALAEQLGTFTPNVGG--PEYV 88 (615)
Q Consensus 15 i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~---~ll~~l~~~~~~~~-~vr~~a~~~l~~l~~~~~~--~~~~ 88 (615)
....+..+...|+..+..|+..|+++......+.... +....+.+++.|.+ .||......+..+...+.. .+|.
T Consensus 43 l~~I~kkL~KkD~~TK~KaL~eL~eli~~~~~e~~~~il~~w~~i~~kl~~d~~~~VR~~t~~v~s~l~t~lkk~lsp~L 122 (1312)
T KOG0803|consen 43 LDIIVKKLLKRDETTKIKALQELSELIDTSDTEELKGILPEWLVIYAKLIIDEDRTVRLLTHDVFSKLLTKLKKKLSPFL 122 (1312)
T ss_pred HHHHHHHHhccChHHHHHHHHhHHHhcccccchHHhhhHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 5667778888999999999999999987666553222 22233455666777 5999888888877755433 5678
Q ss_pred hhchHHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHH----hhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhh
Q psy14014 89 HCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDL----EAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGV 164 (615)
Q Consensus 89 ~~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~----~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~ 164 (615)
+.++|..--..-|.+..|-.+|...+......-...+. ...+.+++....-.. .+..
T Consensus 123 K~li~~wl~~~~d~~~~vs~aa~~sf~~~f~~ek~~~v~~~c~~~i~~~~~~~~~~~-------------------~~~s 183 (1312)
T KOG0803|consen 123 KSLIPPWLGGQFDLDYPVSEAAKASFKDGFAEEKDRHVWFKCDPEIFYLVTEILVKE-------------------TPDS 183 (1312)
T ss_pred HhhhhhhhheecccchHHHHHHHHHHHhhcChhhhHHHHHHhhHHHHHHHHHHHhcc-------------------Cccc
Confidence 88888877777777788888887777665441111111 112222222211000 0000
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhH---------hhhHHHHHHhhccCchhHHHHHHHHHHHHHh
Q psy14014 165 KAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLK---------TDIIPMFVNLAQDEQDSVRLLAVEACVSIAS 235 (615)
Q Consensus 165 ~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~---------~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~ 235 (615)
..........-.+....+|-..++.++..+.+..+++.-. -.-...+..+.++..+.+|.+..+.+..+..
T Consensus 184 lSd~~~~s~Ee~E~k~~Rvi~ssLl~l~~l~~~~~~~~el~~~~~~~kt~~s~~~fWk~~~~k~~~i~~~~~ell~~l~~ 263 (1312)
T KOG0803|consen 184 LSDLRTLSSEELESKYQRVISSSLLLLLKLFKITGDEEELHSLSEKEKTFLSSEKFWKLLKSKSPSIKVALLELLLSLID 263 (1312)
T ss_pred cchhhhcchHHHHHhhHHHHHHHHHHHHHHHHHhCchHhhhhhhhhhhhhhhHHHHHHHhcCCCcchhHHHHHHHHHHHh
Confidence 0000000001111122233333444444444333321111 1123567788899999999999998888776
Q ss_pred hcChh---hHHHhHHHHHHHhcCCCC
Q psy14014 236 LLSQS---DVEQLVMPTLRQCSGDTS 258 (615)
Q Consensus 236 ~~~~~---~~~~~l~~~l~~~~~d~~ 258 (615)
.+..- ....++.|.+.....+.+
T Consensus 264 ~i~~~~~~~~~~~l~~~~~~~~~~~d 289 (1312)
T KOG0803|consen 264 DILNRVMESEKNYLKPVLLGSIDSLD 289 (1312)
T ss_pred hhHHhcchhhhhHhhHHHHccccccc
Confidence 65532 223455566655555544
No 243
>smart00288 VHS Domain present in VPS-27, Hrs and STAM. Unpublished observations. Domain of unknown function.
Probab=91.57 E-value=4.5 Score=33.48 Aligned_cols=101 Identities=13% Similarity=0.137 Sum_probs=70.0
Q ss_pred cCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHH
Q psy14014 254 SGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVK 333 (615)
Q Consensus 254 ~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~ 333 (615)
+.+++|..-..++..+.. ........+..+.+.+++.++.+...|+..+..+.++++...........++..+.
T Consensus 13 l~~~dw~~~l~icD~i~~------~~~~~k~a~r~l~krl~~~n~~v~l~AL~lLe~~vkNcg~~f~~ev~s~~fl~~L~ 86 (133)
T smart00288 13 LLEEDWELILEICDLINS------TPDGPKDAVRLLKKRLNNKNPHVALLALTLLDACVKNCGSKFHLEVASKEFLNELV 86 (133)
T ss_pred CCCcCHHHHHHHHHHHhC------CCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhHHHHHHHH
Confidence 345677654444333221 11224567888999999999999999999999999999887665555566777777
Q ss_pred HhhCCCC--HHHHHHHHHHHHhhchhhcc
Q psy14014 334 DLVADPN--QHVKSALASVIMGLSPILGK 360 (615)
Q Consensus 334 ~~~~d~~--~~vR~~~~~~l~~l~~~~g~ 360 (615)
+++.++. +.||..++..+..-+..+..
T Consensus 87 ~l~~~~~~~~~Vk~kil~li~~W~~~f~~ 115 (133)
T smart00288 87 KLIKPKYPLPLVKKRILELIQEWADAFKN 115 (133)
T ss_pred HHHcCCCCcHHHHHHHHHHHHHHHHHHcC
Confidence 7776643 34888888777776666543
No 244
>KOG1848|consensus
Probab=91.44 E-value=22 Score=40.77 Aligned_cols=222 Identities=16% Similarity=0.133 Sum_probs=125.0
Q ss_pred HHHhCCCChHHHHHHHHhHHHHHHHhchhh--hHhhhHHHHHHhhccC---chhHHHHHHHHHHHHHhhcCh---hhHHH
Q psy14014 173 RNLCQDDTPMVRRAAAGKLGELAKVVEVDY--LKTDIIPMFVNLAQDE---QDSVRLLAVEACVSIASLLSQ---SDVEQ 244 (615)
Q Consensus 173 ~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~--~~~~ll~~l~~~~~d~---~~~vr~~a~~~l~~l~~~~~~---~~~~~ 244 (615)
...+..+--+||....+++..+.+..|... .|..++.++.....-. ...+-+.+..++.-++..+-. ..+..
T Consensus 848 v~~~s~~~~evr~~sl~~l~silet~ge~ll~~w~sV~eml~s~~d~~~ekek~ivrlgf~~lrlIssDfLqSLp~sci~ 927 (1610)
T KOG1848|consen 848 VSDNSSRGVEVRISSLEALVSILETVGEHLLHGWQSVFEMLRSATDFGSEKEKKIVRLGFSCLRLISSDFLQSLPTSCIL 927 (1610)
T ss_pred HHHhcCccceeeHHHHHHHHHHHhccchhhccccHHHHHHHHHHhhccchhhhhHHHhhhhhhhhhhhcchhcCChHHHH
Confidence 344555667888888899988888776522 1566666666554322 345555666666655544322 23344
Q ss_pred hHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHhCcc-------------------------chhh----hHHHHHHHhhc
Q psy14014 245 LVMPTLRQCSG-DTSWRVRYMVADKFTDLQKAVGPE-------------------------ITKT----DLVQAFQMLLK 294 (615)
Q Consensus 245 ~l~~~l~~~~~-d~~~~vR~~~~~~l~~l~~~~~~~-------------------------~~~~----~l~~~l~~~l~ 294 (615)
.++..+..+.. ..+..+--.++..|..++..+.++ ...+ -++..+.+++.
T Consensus 928 ~lidtl~~fs~QktdlNISltAi~lfWtvsDfl~~km~S~sed~~~~~~~e~~~ss~~~~~~l~e~lwi~ll~~L~~~~~ 1007 (1610)
T KOG1848|consen 928 DLIDTLLVFSRQKTDLNISLTAIGLFWTVSDFLKNKMFSTSEDSCAYNSVEDLYSSMKSKEILPEVLWIMLLVHLADLCE 1007 (1610)
T ss_pred HHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHhhhhccchhhhhhcchhhhcccccchhhhhhHHHHHHHHHHHHHhc
Confidence 45555544432 233333344444444433332210 0011 13455677889
Q ss_pred CCcHHHHHHHHHHHHHHHhhccccch----hHHHHHhhHHHHHHhh-C-CCCH---HH----HHHHHHHHHhhchhhcch
Q psy14014 295 DSEAEVRAAAANKVRDFCQNLDAYNQ----ENIIMTYILPYVKDLV-A-DPNQ---HV----KSALASVIMGLSPILGKH 361 (615)
Q Consensus 295 d~~~~vr~~a~~~l~~~~~~~~~~~~----~~~~~~~l~p~l~~~~-~-d~~~---~v----R~~~~~~l~~l~~~~g~~ 361 (615)
|+-++||..|++.+=++...-+.... +..+++.++|.|...- + -.+| .+ -...+-.++.+++.+...
T Consensus 1008 dsr~eVRngAvqtlfri~~Shg~~l~~~aW~s~~w~vi~pLLd~~~~q~~~ewngkeiqkqwtet~~ltisgIaklf~e~ 1087 (1610)
T KOG1848|consen 1008 DSRAEVRNGAVQTLFRIFNSHGSKLGTNAWASCCWLVIMPLLDSQPIQNVSEWNGKEIQKQWTETSCLTISGIAKLFSEN 1087 (1610)
T ss_pred cchHHHhhhHHHHHHHHHhhhcccCChhHHHHHHHHHHHHHhccccccchhhhcchhHhhhhhhhhhhhHHHHHHHHHHH
Confidence 99999999999999887765433222 2345566666664110 0 0111 11 235566677777665431
Q ss_pred h-----------hhhhhHHHHHHhhcCCChhHHHHHHHhhhHhh
Q psy14014 362 N-----------TVDHLLPLFLSQLKDECPEVRLNIISNLDCVN 394 (615)
Q Consensus 362 ~-----------~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~ 394 (615)
. ..+.++..+.....+.++++...+++++.++.
T Consensus 1088 fk~llnln~f~~vwe~ll~flkrl~s~~s~e~slsai~~~qell 1131 (1610)
T KOG1848|consen 1088 FKLLLNLNGFLDVWEELLQFLKRLHSDISPEISLSAIKALQELL 1131 (1610)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHhcCChHhHHHHHHHHHHHH
Confidence 1 12345556666677889999999999876653
No 245
>PF08623 TIP120: TATA-binding protein interacting (TIP20); InterPro: IPR013932 TIP120 (also known as cullin-associated and neddylation-dissociated protein 1) is a TATA binding protein interacting protein that enhances transcription []. ; PDB: 4A0C_A 1U6G_C.
Probab=91.20 E-value=2 Score=36.87 Aligned_cols=98 Identities=12% Similarity=0.133 Sum_probs=49.6
Q ss_pred CchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccch--hhhHHHHHHHhh--
Q psy14014 218 EQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEIT--KTDLVQAFQMLL-- 293 (615)
Q Consensus 218 ~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~--~~~l~~~l~~~l-- 293 (615)
+--++|++|.+++.++............++..+...+.| +..+|.-+...+.+++...+.... .+.+.+.+...+
T Consensus 39 DGLelRK~ayE~lytlLd~~~~~~~~~~~~~~v~~GL~D-~~DIk~L~~~~l~kl~~~~p~~v~~~Ld~l~~~l~~~L~~ 117 (169)
T PF08623_consen 39 DGLELRKAAYECLYTLLDTCLSRIDISEFLDRVEAGLKD-EHDIKMLCHLMLSKLAQLAPEEVLQRLDSLVEPLRKTLSK 117 (169)
T ss_dssp GGGHHHHHHHHHHHHHHHSTCSSS-HHHHHHHHHHTTSS--HHHHHHHHHHHHHHHHS-HHHHHHCCTTTHHHHHHHHH-
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHhhcCC-cHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHhhc
Confidence 334566666666666665544433334455666666666 666666666666666543322211 123444444433
Q ss_pred --cC--------CcHHHHHHHHHHHHHHHhhcc
Q psy14014 294 --KD--------SEAEVRAAAANKVRDFCQNLD 316 (615)
Q Consensus 294 --~d--------~~~~vr~~a~~~l~~~~~~~~ 316 (615)
++ ...+...++++++..+...++
T Consensus 118 k~k~~AvkQE~Ek~~E~~rs~lr~~~~l~~~i~ 150 (169)
T PF08623_consen 118 KLKENAVKQEIEKQQELIRSVLRAVKALNSKIP 150 (169)
T ss_dssp ---TTS-HHHHHHHHHHHHHHHHHHHHH-HSST
T ss_pred cCCCCcccccHHHHHHHHHHHHHHHHHHHHhCc
Confidence 22 123555667777766655443
No 246
>PF08569 Mo25: Mo25-like; InterPro: IPR013878 Mo25-like proteins are involved in both polarised growth and cytokinesis. In fission yeast Mo25 is localised alternately to the spindle pole body and to the site of cell division in a cell cycle dependent manner [, ]. ; PDB: 2WTK_A 1UPK_A 3GNI_A 1UPL_A.
Probab=91.14 E-value=16 Score=35.70 Aligned_cols=187 Identities=9% Similarity=0.070 Sum_probs=109.3
Q ss_pred hHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhH----------HHhHHHHHHHhcCCCChHHHHHHHHHHHHH
Q psy14014 203 LKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDV----------EQLVMPTLRQCSGDTSWRVRYMVADKFTDL 272 (615)
Q Consensus 203 ~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~----------~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l 272 (615)
...++++.+...+..-+.+.|+.+...+..+...-.++.. .+.++..+...-++++-.. ..|.+
T Consensus 73 ~~~dll~~Li~~L~~L~fEsrKdv~~if~~llr~~~~~~~~p~v~yl~~~~peil~~L~~gy~~~dial------~~g~m 146 (335)
T PF08569_consen 73 YRSDLLYLLIRNLPKLDFESRKDVAQIFSNLLRRQIGSRSPPTVDYLERHRPEILDILLRGYENPDIAL------NCGDM 146 (335)
T ss_dssp HHHTHHHHHHHTGGGS-HHHHHHHHHHHHHHHT--BTTB--HHHHHHHT--THHHHHHHHGGGSTTTHH------HHHHH
T ss_pred HHhCHHHHHHHHhhhCCCcccccHHHHHHHHHhhccCCCCCchHHHHHhCCHHHHHHHHHHhcCccccc------hHHHH
Confidence 3456777777777777777777777777766555322210 1345555555555554211 11222
Q ss_pred HHHhCcc------chhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchh---HHHHHhhHHHHHHhhCCCCHHH
Q psy14014 273 QKAVGPE------ITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQE---NIIMTYILPYVKDLVADPNQHV 343 (615)
Q Consensus 273 ~~~~~~~------~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~---~~~~~~l~p~l~~~~~d~~~~v 343 (615)
..-+-+. ...+..+-.+.+..+.++-+|-..|...+..+... ++.... ....+.++.....++.++++-+
T Consensus 147 lRec~k~e~l~~~iL~~~~f~~ff~~~~~~~Fdiasdaf~t~~~llt~-hk~~~a~fl~~n~d~ff~~~~~Ll~s~NYvt 225 (335)
T PF08569_consen 147 LRECIKHESLAKIILYSECFWKFFKYVQLPNFDIASDAFSTFKELLTR-HKKLVAEFLSNNYDRFFQKYNKLLESSNYVT 225 (335)
T ss_dssp HHHHTTSHHHHHHHHTSGGGGGHHHHTTSSSHHHHHHHHHHHHHHHHS-SHHHHHHHHHHTHHHHHHHHHHHCT-SSHHH
T ss_pred HHHHHhhHHHHHHHhCcHHHHHHHHHhcCCccHhHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHccCCCeEe
Confidence 1111110 00112223355677788889988888888887653 111111 1124567778888999999999
Q ss_pred HHHHHHHHHhhchhhcchh----h--hhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhh
Q psy14014 344 KSALASVIMGLSPILGKHN----T--VDHLLPLFLSQLKDECPEVRLNIISNLDCVNEV 396 (615)
Q Consensus 344 R~~~~~~l~~l~~~~g~~~----~--~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~ 396 (615)
|+..++.|+.+...-.... + .+.-+..+..+++|++..+|..|+..+..++..
T Consensus 226 krqslkLL~ellldr~n~~vm~~yi~~~~nLkl~M~lL~d~sk~Iq~eAFhvFKvFVAN 284 (335)
T PF08569_consen 226 KRQSLKLLGELLLDRSNFNVMTRYISSPENLKLMMNLLRDKSKNIQFEAFHVFKVFVAN 284 (335)
T ss_dssp HHHHHHHHHHHHHSGGGHHHHHHHTT-HHHHHHHHHHTT-S-HHHHHHHHHHHHHHHH-
T ss_pred ehhhHHHHHHHHHchhHHHHHHHHHCCHHHHHHHHHHhcCcchhhhHHHHHHHHHHHhC
Confidence 9999999998864322111 1 234567788899999999999999988877654
No 247
>cd03568 VHS_STAM VHS domain family, STAM subfamily; members include STAM (Signal Transducing Adaptor Molecule), EAST (EGFR-associated protein with SH3 and TAM domains) and Hbp (Hrs-binding protein). Collectively, they are referred to as STAM. All STAMs have at their N-termini a VHS domain, which is involved in cytokine-mediated intracellular signal transduction and has a superhelical structure similar to the structure of ARM (Armadillo) repeats, followed by a SH3 (Src homology 3) domain, a well-established protein-protein interaction domain. At the C-termini of most vertebrate STAMS, an ITAM (Immunoreceptor Tyrosine-based Activation) motif is present, which mediates the binding of HRS (hepatocyte growth factor-regulated tyrosine kinase substrate) in endocytic and exocytic machineries.
Probab=91.06 E-value=8.4 Score=32.33 Aligned_cols=99 Identities=9% Similarity=0.011 Sum_probs=69.1
Q ss_pred CCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhH----HHhHHHHHHH
Q psy14014 177 QDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDV----EQLVMPTLRQ 252 (615)
Q Consensus 177 ~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~----~~~l~~~l~~ 252 (615)
..++|..-..+|+.+..= +....+.+..+.+.+++.++.|...|+..+..+.++.|..-. ...++..+.+
T Consensus 14 ~~~dw~~il~icD~I~~~------~~~~k~a~ral~KRl~~~n~~v~l~AL~LLe~~vkNCG~~fh~evask~Fl~eL~k 87 (144)
T cd03568 14 TSENWGLILDVCDKVKSD------ENGAKDCLKAIMKRLNHKDPNVQLRALTLLDACAENCGKRFHQEVASRDFTQELKK 87 (144)
T ss_pred CCcCHHHHHHHHHHHhcC------CccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCHHHHHHHhhHHHHHHHHH
Confidence 445675555555544321 112345666777778888999999999999999999987422 2346666777
Q ss_pred hcCC-CChHHHHHHHHHHHHHHHHhCccch
Q psy14014 253 CSGD-TSWRVRYMVADKFTDLQKAVGPEIT 281 (615)
Q Consensus 253 ~~~d-~~~~vR~~~~~~l~~l~~~~~~~~~ 281 (615)
++++ .+..||.-+...+...+..++.+..
T Consensus 88 l~~~~~~~~Vk~kil~li~~W~~~f~~~~~ 117 (144)
T cd03568 88 LINDRVHPTVKEKLREVVKQWADEFKNDPS 117 (144)
T ss_pred HhcccCCHHHHHHHHHHHHHHHHHhCCCcc
Confidence 7777 6788999999998888888775543
No 248
>PF08064 UME: UME (NUC010) domain; InterPro: IPR012993 This domain is characteristic of UVSB PI-3 kinase, MEI-41 and ESR1 [].; GO: 0004674 protein serine/threonine kinase activity
Probab=91.05 E-value=4.5 Score=31.92 Aligned_cols=66 Identities=15% Similarity=0.148 Sum_probs=47.1
Q ss_pred CCChHHHHHHHHhHHHHHHHhchh--hhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHh
Q psy14014 178 DDTPMVRRAAAGKLGELAKVVEVD--YLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQL 245 (615)
Q Consensus 178 d~~~~vR~~a~~~l~~l~~~~~~~--~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~ 245 (615)
..+..-|+.+..+++.+.+..++. ...+.+.-.+...+.. +++|..|+++|..+...++.+...+.
T Consensus 26 ~~~~~ek~~~l~si~~lI~~~~~~i~~~~pQI~a~L~sal~~--~~l~~~al~~W~~fi~~L~~~~l~~l 93 (107)
T PF08064_consen 26 KKPIPEKKRALRSIEELIKLGGSHISSARPQIMACLQSALEI--PELREEALSCWNCFIKTLDEEDLGPL 93 (107)
T ss_pred CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC--hhhHHHHHHHHHHHHHHCCHHHHHHH
Confidence 467788999999999999944432 2234444444544433 38999999999999999998765443
No 249
>PF03224 V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004908 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. This entry represents subunit H (also known as Vma13p) found in the V1 complex of V-ATPases. This subunit has a regulatory function, being responsible for activating ATPase activity and coupling ATPase activity to proton flow []. The yeast enzyme contains five motifs similar to the HEAT or Armadillo repeats seen in the importins, and can be divided into two distinct domains: a large N-terminal domain consisting of stacked alpha helices, and a smaller C-terminal alpha-helical domain with a similar superhelical topology to an armadillo repeat []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0046961 proton-transporting ATPase activity, rotational mechanism, 0015991 ATP hydrolysis coupled proton transport, 0000221 vacuolar proton-transporting V-type ATPase, V1 domain; PDB: 1HO8_A.
Probab=91.05 E-value=16 Score=35.56 Aligned_cols=151 Identities=14% Similarity=0.186 Sum_probs=77.3
Q ss_pred hHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHH--HhHHHHH----HHhcCCCChHHHHHHHHHHHHHHHH--hCc
Q psy14014 207 IIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVE--QLVMPTL----RQCSGDTSWRVRYMVADKFTDLQKA--VGP 278 (615)
Q Consensus 207 ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~--~~l~~~l----~~~~~d~~~~vR~~~~~~l~~l~~~--~~~ 278 (615)
....|..+++.+++.++..|...+..+...-+..... ..+++.+ .+.++.++..+...++.++..+... +..
T Consensus 106 ~~~~fl~ll~~~D~~i~~~a~~iLt~Ll~~~~~~~~~~~~~~l~~ll~~L~~~l~~~~~~~~~~av~~L~~LL~~~~~R~ 185 (312)
T PF03224_consen 106 PYSPFLKLLDRNDSFIQLKAAFILTSLLSQGPKRSEKLVKEALPKLLQWLSSQLSSSDSELQYIAVQCLQNLLRSKEYRQ 185 (312)
T ss_dssp -HHHHHHH-S-SSHHHHHHHHHHHHHHHTSTTT--HHHHHHHHHHHHHHHH-TT-HHHH---HHHHHHHHHHHTSHHHHH
T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhCcchhHH
Confidence 3444555777789999999999999988776653322 1333444 4433334455667888888877632 111
Q ss_pred cchhhhHHHHHHHhh-----cCC--cHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCC-CCHHHHHHHHHH
Q psy14014 279 EITKTDLVQAFQMLL-----KDS--EAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVAD-PNQHVKSALASV 350 (615)
Q Consensus 279 ~~~~~~l~~~l~~~l-----~d~--~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d-~~~~vR~~~~~~ 350 (615)
.......++.+...+ .+. ..++.-.++.++=.+ .+.++.........++|.+.+++++ ..++|-+-++.+
T Consensus 186 ~f~~~~~v~~l~~iL~~~~~~~~~~~~Ql~Y~~ll~lWlL--SF~~~~~~~~~~~~~i~~L~~i~~~~~KEKvvRv~la~ 263 (312)
T PF03224_consen 186 VFWKSNGVSPLFDILRKQATNSNSSGIQLQYQALLCLWLL--SFEPEIAEELNKKYLIPLLADILKDSIKEKVVRVSLAI 263 (312)
T ss_dssp HHHTHHHHHHHHHHHH---------HHHHHHHHHHHHHHH--TTSHHHHHHHHTTSHHHHHHHHHHH--SHHHHHHHHHH
T ss_pred HHHhcCcHHHHHHHHHhhcccCCCCchhHHHHHHHHHHHH--hcCHHHHHHHhccchHHHHHHHHHhcccchHHHHHHHH
Confidence 111245566666666 222 233343443333221 2222222222223377777776653 456777778888
Q ss_pred HHhhchhhc
Q psy14014 351 IMGLSPILG 359 (615)
Q Consensus 351 l~~l~~~~g 359 (615)
+.++...-.
T Consensus 264 l~Nl~~~~~ 272 (312)
T PF03224_consen 264 LRNLLSKAP 272 (312)
T ss_dssp HHHTTSSSS
T ss_pred HHHHHhccH
Confidence 888776543
No 250
>COG5656 SXM1 Importin, protein involved in nuclear import [Posttranslational modification, protein turnover, chaperones]
Probab=91.02 E-value=24 Score=37.58 Aligned_cols=158 Identities=8% Similarity=0.021 Sum_probs=103.5
Q ss_pred HhhhhhhccCCChhhHHHHHHHHHHHhC-----C---CChHHHHHHHHhHHHHHHHhch-----hhhHhhhHHHHHHhhc
Q psy14014 150 CGLFSVCYPRVTAGVKAELRSHFRNLCQ-----D---DTPMVRRAAAGKLGELAKVVEV-----DYLKTDIIPMFVNLAQ 216 (615)
Q Consensus 150 ~~~l~~~~~~~~~~~~~~l~~~l~~l~~-----d---~~~~vR~~a~~~l~~l~~~~~~-----~~~~~~ll~~l~~~~~ 216 (615)
...+-.+...-++...+.+++++...+. + .+..-...|...+..+...+.. ......+++.+...++
T Consensus 391 l~fl~~~~sKrke~TfqgiLsf~~sil~qsaa~psn~dnarq~egalr~lasi~s~itk~sp~an~me~fiv~hv~P~f~ 470 (970)
T COG5656 391 LFFLIISKSKRKEETFQGILSFLLSILGQSAATPSNIDNARQAEGALRLLASIKSFITKMSPAANVMEYFIVNHVIPAFR 470 (970)
T ss_pred HHHHHHHhcccchhhhhhHHHHHHHHHhcccCCCCccccHHHHhhHHHHHHHHHHHhccCchHHHHHHHHHHHHhhHhhc
Confidence 3344444455566666677777665551 2 2344555677777777664332 1234467777888889
Q ss_pred cCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccch-hhhHHHHH---HHh
Q psy14014 217 DEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEIT-KTDLVQAF---QML 292 (615)
Q Consensus 217 d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~-~~~l~~~l---~~~ 292 (615)
++.--.|..|.+.+..+.+.+++..+...+.+...+++++.+-.|+..++.++..+...-..+.. ..++.+.+ +.+
T Consensus 471 s~ygfL~Srace~is~~eeDfkd~~ill~aye~t~ncl~nn~lpv~ieAalAlq~fi~~~q~h~k~sahVp~tmekLLsL 550 (970)
T COG5656 471 SNYGFLKSRACEFISTIEEDFKDNGILLEAYENTHNCLKNNHLPVMIEAALALQFFIFNEQSHEKFSAHVPETMEKLLSL 550 (970)
T ss_pred CcccchHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHhchhhhHHHHhhhhHHHHHHHHh
Confidence 99999999999999999888888888888888888999999999999999998887654322221 22333343 444
Q ss_pred hcCCcHHHHHHHHHH
Q psy14014 293 LKDSEAEVRAAAANK 307 (615)
Q Consensus 293 l~d~~~~vr~~a~~~ 307 (615)
.++-+.++-...+..
T Consensus 551 Sn~feiD~LS~vMe~ 565 (970)
T COG5656 551 SNTFEIDPLSMVMES 565 (970)
T ss_pred cccccchHHHHHHHH
Confidence 455555554444433
No 251
>PF00790 VHS: VHS domain; InterPro: IPR002014 The VHS domain is a ~140 residues long domain, whose name is derived from its occurrence in VPS-27, Hrs and STAM. Based on regions surrounding the domain, VHS-proteins can be divided into 4 groups []: STAM/EAST/Hbp which all share the domain composition VHS-SH3-ITAM and carry one or two ubiquitin-interacting motifs Proteins with a FYVE domain (IPR000306 from INTERPRO) C-terminal to VHS which also carry one or two ubiquitin-interacting motifs GGA proteins with a domain composition VHS-GAT (GGA and Tom1) homology domain VHS domain alone or in combination with domains other than those listed above The VHS domain is always found at the N- terminus of proteins suggesting that such topology is important for function. The domain is considered to have a general membrane targeting/cargo recognition role in vesicular trafficking []. Resolution of the crystal structure of the VHS domain of Drosophila Hrs and human Tom1 revealed that it consists of eight helices arranged in a double-layer superhelix []. The existence of conserved patches of residues on the domain surface suggests that VHS domains may be involved in protein-protein recognition and docking. Overall, sequence similarity is low (approx 25%) amongst domain family members.; GO: 0006886 intracellular protein transport; PDB: 1X5B_A 2L0T_B 1DVP_A 3LDZ_C 3ZYQ_A 4AVX_A 3G2U_A 3G2W_A 1UJJ_A 3G2V_A ....
Probab=90.88 E-value=3.8 Score=34.32 Aligned_cols=79 Identities=13% Similarity=0.177 Sum_probs=57.9
Q ss_pred hhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCC--HH--HHHHHHHHHHhhchh
Q psy14014 282 KTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPN--QH--VKSALASVIMGLSPI 357 (615)
Q Consensus 282 ~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~--~~--vR~~~~~~l~~l~~~ 357 (615)
..+.+..+.+.+++.++.+...|+..++.+.++++...........++..+.+++.+.. .. ||..+...+..-+..
T Consensus 40 ~kea~~~l~krl~~~~~~vq~~aL~lld~lvkNcg~~f~~ev~~~~fl~~l~~l~~~~~~~~~~~Vk~k~l~ll~~W~~~ 119 (140)
T PF00790_consen 40 AKEAARALRKRLKHGNPNVQLLALTLLDALVKNCGPRFHREVASKEFLDELVKLIKSKKTDPETPVKEKILELLQEWAEA 119 (140)
T ss_dssp HHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHHHTTTHHHSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHhHHHHHHHHHHHHccCCCCchhHHHHHHHHHHHHHHHH
Confidence 45788889999999999999999999999999988765544334456666666555332 22 788887777776666
Q ss_pred hcc
Q psy14014 358 LGK 360 (615)
Q Consensus 358 ~g~ 360 (615)
++.
T Consensus 120 f~~ 122 (140)
T PF00790_consen 120 FKS 122 (140)
T ss_dssp TTT
T ss_pred HCC
Confidence 643
No 252
>PF11698 V-ATPase_H_C: V-ATPase subunit H; InterPro: IPR011987 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. This entry represents the C-terminal domain of subunit H (also known as Vma13p) found in the V1 complex of V-ATPases. This subunit has a regulatory function, being responsible for activating ATPase activity and coupling ATPase activity to proton flow []. The yeast enzyme contains five motifs similar to the HEAT or Armadillo repeats seen in the importins, and can be divided into two distinct domains: a large N-terminal domain consisting of stacked alpha helices, and a smaller C-terminal alpha-helical domain with a similar superhelical topology to an armadillo repeat []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0016820 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, 0015991 ATP hydrolysis coupled proton transport, 0000221 vacuolar proton-transporting V-type ATPase, V1 domain; PDB: 1HO8_A.
Probab=90.81 E-value=1.5 Score=34.99 Aligned_cols=67 Identities=21% Similarity=0.219 Sum_probs=45.9
Q ss_pred HHHHHHHHh-CCCChHHHHHHHHhHHHHHHHhchhh---hHhhhHHHHHHhhccCchhHHHHHHHHHHHHH
Q psy14014 168 LRSHFRNLC-QDDTPMVRRAAAGKLGELAKVVEVDY---LKTDIIPMFVNLAQDEQDSVRLLAVEACVSIA 234 (615)
Q Consensus 168 l~~~l~~l~-~d~~~~vR~~a~~~l~~l~~~~~~~~---~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~ 234 (615)
++..+.+++ ...++.+-..||.=+|.+++..+... ..-..-..+.+++++++++||..|+.++..+.
T Consensus 44 llk~L~~lL~~s~d~~~laVac~Dig~~vr~~p~gr~ii~~lg~K~~vM~Lm~h~d~eVr~eAL~avQklm 114 (119)
T PF11698_consen 44 LLKKLIKLLDKSDDPTTLAVACHDIGEFVRHYPNGRNIIEKLGAKERVMELMNHEDPEVRYEALLAVQKLM 114 (119)
T ss_dssp HHHHHHHHH-SHHHHHHHHHHHHHHHHHHHH-GGGHHHHHHHSHHHHHHHHTS-SSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCCCcceeehhhcchHHHHHHChhHHHHHHhcChHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 444555555 33477777888889999998876521 12245567788888999999999998887764
No 253
>cd03567 VHS_GGA VHS domain family, GGA subfamily; GGA (Golgi-localized, Gamma-ear-containing, Arf-binding) comprise a subfamily of ubiquitously expressed, monomeric, motif-binding cargo/clathrin adaptor proteins. The VHS domain has a superhelical structure similar to the structure of the ARM (Armadillo) repeats and is present at the N-termini of proteins. GGA proteins have a multidomain structure consisting of an N-terminal VHS domain linked by a short proline-rich linker to a GAT (GGA and TOM) domain, which is followed by a long flexible linker to the C-terminal appendage, GAE (gamma-adaptin ear) domain. The VHS domain of GGA proteins binds to the acidic-cluster dileucine (DxxLL) motif found on the cytoplasmic tails of cargo proteins trafficked between the trans-Golgi network and the endosomal system.
Probab=90.79 E-value=8.6 Score=32.00 Aligned_cols=101 Identities=10% Similarity=0.121 Sum_probs=71.4
Q ss_pred cCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHH
Q psy14014 254 SGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVK 333 (615)
Q Consensus 254 ~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~ 333 (615)
+.+++|..=..++..+.. . .......+-.+.+.+++.++.|...|+..|..+.++++.....+.....++.-+.
T Consensus 14 l~~~dw~~ileicD~In~-----~-~~~~k~a~rai~krl~~~n~~v~l~AL~LLe~~vkNCG~~fh~evas~~Fl~el~ 87 (139)
T cd03567 14 NREEDWEAIQAFCEQINK-----E-PEGPQLAVRLLAHKIQSPQEKEALQALTVLEACMKNCGERFHSEVGKFRFLNELI 87 (139)
T ss_pred CCCCCHHHHHHHHHHHHc-----C-CccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHHhHHHHHHHH
Confidence 446778655544444422 1 1123467778888899999999999999999999999987766555566777777
Q ss_pred HhhCC------CCHHHHHHHHHHHHhhchhhcc
Q psy14014 334 DLVAD------PNQHVKSALASVIMGLSPILGK 360 (615)
Q Consensus 334 ~~~~d------~~~~vR~~~~~~l~~l~~~~g~ 360 (615)
+++.. .+..||.-++..+..-+..++.
T Consensus 88 kl~~~k~~~~~~~~~Vk~kil~li~~W~~~f~~ 120 (139)
T cd03567 88 KLVSPKYLGSRTSEKVKTKIIELLYSWTLELPH 120 (139)
T ss_pred HHhccccCCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 77743 5688988888877766665543
No 254
>PF00514 Arm: Armadillo/beta-catenin-like repeat; InterPro: IPR000225 The armadillo (Arm) repeat is an approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila melanogaster segment polarity gene armadillo involved in signal transduction through wingless. Animal Arm-repeat proteins function in various processes, including intracellular signalling and cytoskeletal regulation, and include such proteins as beta-catenin, the junctional plaque protein plakoglobin, the adenomatous polyposis coli (APC) tumour suppressor protein, and the nuclear transport factor importin-alpha, amongst others []. A subset of these proteins is conserved across eukaryotic kingdoms. In higher plants, some Arm-repeat proteins function in intracellular signalling like their mammalian counterparts, while others have novel functions []. The 3-dimensional fold of an armadillo repeat is known from the crystal structure of beta-catenin, where the 12 repeats form a superhelix of alpha helices with three helices per unit []. The cylindrical structure features a positively charged grove, which presumably interacts with the acidic surfaces of the known interaction partners of beta-catenin.; GO: 0005515 protein binding; PDB: 2Z6G_A 1IQ1_C 3RZX_A 2C1M_A 3BTR_C 3OQS_A 3TPO_A 1IAL_A 1Q1S_C 1PJM_B ....
Probab=90.11 E-value=0.72 Score=28.86 Aligned_cols=30 Identities=13% Similarity=0.134 Sum_probs=20.3
Q ss_pred HhhHHHHHhhCCCCCchHHHHHHHHHHHHh
Q psy14014 544 NFLLPTVLNMAGDNVANVRFNVAKTLQKIG 573 (615)
Q Consensus 544 ~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~ 573 (615)
...+|.|.+++.++++.|+..++.+|+++.
T Consensus 11 ~g~i~~Lv~ll~~~~~~v~~~a~~al~nl~ 40 (41)
T PF00514_consen 11 AGGIPPLVQLLKSPDPEVQEEAAWALGNLA 40 (41)
T ss_dssp TTHHHHHHHHTTSSSHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHcCCCHHHHHHHHHHHHHHh
Confidence 345666777777777777777777776653
No 255
>PF00514 Arm: Armadillo/beta-catenin-like repeat; InterPro: IPR000225 The armadillo (Arm) repeat is an approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila melanogaster segment polarity gene armadillo involved in signal transduction through wingless. Animal Arm-repeat proteins function in various processes, including intracellular signalling and cytoskeletal regulation, and include such proteins as beta-catenin, the junctional plaque protein plakoglobin, the adenomatous polyposis coli (APC) tumour suppressor protein, and the nuclear transport factor importin-alpha, amongst others []. A subset of these proteins is conserved across eukaryotic kingdoms. In higher plants, some Arm-repeat proteins function in intracellular signalling like their mammalian counterparts, while others have novel functions []. The 3-dimensional fold of an armadillo repeat is known from the crystal structure of beta-catenin, where the 12 repeats form a superhelix of alpha helices with three helices per unit []. The cylindrical structure features a positively charged grove, which presumably interacts with the acidic surfaces of the known interaction partners of beta-catenin.; GO: 0005515 protein binding; PDB: 2Z6G_A 1IQ1_C 3RZX_A 2C1M_A 3BTR_C 3OQS_A 3TPO_A 1IAL_A 1Q1S_C 1PJM_B ....
Probab=90.05 E-value=0.71 Score=28.87 Aligned_cols=29 Identities=21% Similarity=0.273 Sum_probs=19.3
Q ss_pred hhHHHHHHhhCCCCHHHHHHHHHHHHhhc
Q psy14014 327 YILPYVKDLVADPNQHVKSALASVIMGLS 355 (615)
Q Consensus 327 ~l~p~l~~~~~d~~~~vR~~~~~~l~~l~ 355 (615)
..+|.|.+++.+.+..+|..+++++++++
T Consensus 12 g~i~~Lv~ll~~~~~~v~~~a~~al~nl~ 40 (41)
T PF00514_consen 12 GGIPPLVQLLKSPDPEVQEEAAWALGNLA 40 (41)
T ss_dssp THHHHHHHHTTSSSHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHcCCCHHHHHHHHHHHHHHh
Confidence 35666666677777777777777766654
No 256
>COG5095 TAF6 Transcription initiation factor TFIID, subunit TAF6 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=89.96 E-value=5.5 Score=37.03 Aligned_cols=57 Identities=21% Similarity=0.296 Sum_probs=40.8
Q ss_pred chHHHHHHHHHHHHHHHHhChHH--hhhchhHHHHhhhcCC--CchHHHHHHHHHHHHHhh
Q psy14014 480 VYAIREAATLNLKKLVEQFGSEW--AQSTVIPKVVAMSRDQ--NYLHRMTCLFCINVLAEA 536 (615)
Q Consensus 480 ~~~vR~~a~~~l~~l~~~~~~~~--~~~~i~~~l~~~~~d~--~~~~R~~a~~~l~~l~~~ 536 (615)
.+.+|..|+..++-+++.|+... ....+..++++..-|. .......|++++..+.+.
T Consensus 300 ~~alRd~AA~ll~yV~~~F~~~YktLkPRvtrTllKafLD~~k~~sT~YGalkgls~l~ke 360 (450)
T COG5095 300 HYALRDVAADLLKYVFSNFSSSYKTLKPRVTRTLLKAFLDREKTESTQYGALKGLSILSKE 360 (450)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhhchHHHHHHHHHHHhcccccchhhhhhhhhhhhchh
Confidence 46799999999999999998753 2345666666654443 445677888888887643
No 257
>PF08389 Xpo1: Exportin 1-like protein; InterPro: IPR013598 The exchange of macromolecules between the nucleus and cytoplasm takes place through nuclear pore complexes within the nuclear membrane. Active transport of large molecules through these pore complexes require carrier proteins, called karyopherins (importins and exportins), which shuttle between the two compartments. This domain is found close to the N terminus of yeast exportin 1 (Xpo1, Crm1, P14068 from SWISSPROT), as well as adjacent to the N-terminal domain of importin-beta (IPR001494 from INTERPRO). Exportin 1 is a nuclear export receptor that translocates proteins out of the nucleus; it interacts with leucine-rich nuclear export signal (NES) sequences in proteins to be transported, as well as with RanGTP [, ]. Importin-beta is a nuclear import receptor that translocates proteins into the nucleus; it interacts with RanGTP and importin-alpha, the latter binding with the nuclear localisation signal (NLS) sequences in proteins to be transported []. More information about these proteins can be found at Protein of the Month: Importins [].; PDB: 3IBV_A 3ICQ_U 3M1I_C 3NC1_A 3NBY_D 3NBZ_D 3NC0_A 3GJX_D 2XWU_B 2X19_B ....
Probab=89.90 E-value=1.6 Score=36.81 Aligned_cols=110 Identities=12% Similarity=0.067 Sum_probs=60.2
Q ss_pred HHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcHHHHHHHHHHhccccCCCCC------------------cchhh
Q psy14014 28 QLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDEDEVLLALAEQLGTFTPNVGG------------------PEYVH 89 (615)
Q Consensus 28 ~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~~vr~~a~~~l~~l~~~~~~------------------~~~~~ 89 (615)
.+|......+..++..-.|+ .|+.+++-+.+.+..+..........|..+.+.+.. .+..+
T Consensus 3 ~i~~kl~~~l~~i~~~~~P~-~Wp~~l~~l~~~~~~~~~~~~~~L~iL~~l~eEi~~~~~~~~~~~r~~~l~~~l~~~~~ 81 (148)
T PF08389_consen 3 FIRNKLAQVLAEIAKRDWPQ-QWPDFLEDLLQLLQSSPQHLELVLRILRILPEEITDFRRSSLSQERRRELKDALRSNSP 81 (148)
T ss_dssp HHHHHHHHHHHHHHHHHTTT-TSTTHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTSHCCHSHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHChh-hCchHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHHH
Confidence 46888889999999888777 677888888777666443333333333333321110 01223
Q ss_pred hchHHHhhhhcCch----hHHHHHHHHHHHHHHhhcChhHHhh-hHHHHHHHhh
Q psy14014 90 CLLPPLESLATVEE----TVVRDKAVESLRLISAQHSPHDLEA-HFVPLVQRLA 138 (615)
Q Consensus 90 ~l~~~l~~l~~~~~----~~vr~~a~~~l~~l~~~~~~~~~~~-~~l~~l~~l~ 138 (615)
.++..+.+.+.... ..+...+++++.....+.+.+.+.+ .+++.+..+.
T Consensus 82 ~i~~~l~~~l~~~~~~~~~~~~~~~L~~l~s~i~~~~~~~i~~~~~l~~~~~~l 135 (148)
T PF08389_consen 82 DILEILSQILSQSSSEANEELVKAALKCLKSWISWIPIELIINSNLLNLIFQLL 135 (148)
T ss_dssp HHHHHHHHHHHHHCHCCHHHHHHHHHHHHHHHTTTS-HHHHHSSSHHHHHHHHT
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHhCCHHHhccHHHHHHHHHHc
Confidence 33444444333221 5666666667766666666554433 2555554444
No 258
>KOG2005|consensus
Probab=89.90 E-value=26 Score=36.85 Aligned_cols=295 Identities=16% Similarity=0.100 Sum_probs=0.0
Q ss_pred CCCCCCCCcchHHHHH-HHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcH-HHHHHHHHHhccccCC
Q psy14014 4 SDSAPDDSLYPIAVLI-DELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDED-EVLLALAEQLGTFTPN 81 (615)
Q Consensus 4 ~~~~~~~~~~~i~~ll-~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~-~vr~~a~~~l~~l~~~ 81 (615)
+++...+.-.|.-.+| +.+++++...|..++-.|+..--....|.....|.|.+.. .+.. +|...++-.||.+.=.
T Consensus 442 ~~~gv~ne~dpalALLsdyv~~~~s~~ri~aIlGLglayaGsq~e~V~~lL~Pi~~d--~~~~~ev~~~aslsLG~IfvG 519 (878)
T KOG2005|consen 442 SNSGVFNECDPALALLSDYLQSSSSIHRIGAILGLGLAYAGSQREEVLELLSPIMFD--TKSPMEVVAFASLSLGMIFVG 519 (878)
T ss_pred eccccccccCHHHHHHHHhccCCCceeehHHhhhhHHhhcCCchHHHHHHHhHHhcC--CCCchhHHHHHHhhcceeEEe
Q ss_pred CCCcchhhhchHHHhhhhcCc--hhHHHHHHHH-HHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhcc
Q psy14014 82 VGGPEYVHCLLPPLESLATVE--ETVVRDKAVE-SLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYP 158 (615)
Q Consensus 82 ~~~~~~~~~l~~~l~~l~~~~--~~~vr~~a~~-~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~ 158 (615)
.+..+....++..+..=-..+ ++..|-.++- ++-.+.+.-..+.....+..+=..+. ..+.++-..|.
T Consensus 520 scn~dvts~ilqtlmekse~El~d~~~RFL~LGL~llflgkqe~~d~~~e~~~~i~~~~~---------~~~~~lv~~ca 590 (878)
T KOG2005|consen 520 SCNEDVTSSILQTLMEKSETELEDQWFRFLALGLALLFLGKQESVDAVVETIKAIEGPIR---------KHESILVKSCA 590 (878)
T ss_pred cCChHHHHHHHHHHHHhhhhhhhchHHHHHHHHHHHHHhcccchHHHHHHHHHHhhhHHH---------HHHHHHHHHhh
Q ss_pred CCChhhHHHH--HHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhh
Q psy14014 159 RVTAGVKAEL--RSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASL 236 (615)
Q Consensus 159 ~~~~~~~~~l--~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~ 236 (615)
+.+.--...+ ...+...-.+....-...-.-.||--.-..+.+...+..+-.|-.++.-.++.+|++.--+++-++..
T Consensus 591 YaGTGnvl~Iq~q~ll~~cgE~~~~~e~~~~~avLgiAliAMgeeig~eM~lR~f~h~l~yge~~iRravPLal~llsvS 670 (878)
T KOG2005|consen 591 YAGTGNVLKIQSQLLLSFCGEHDADLESEQELAVLGIALIAMGEEIGSEMVLRHFGHLLHYGEPHIRRAVPLALGLLSVS 670 (878)
T ss_pred ccccCceEEechhhhhhhcCCCccchhhhccchhhhhhhhhhhhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHhhhccC
Q ss_pred cChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHh
Q psy14014 237 LSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQ 313 (615)
Q Consensus 237 ~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~ 313 (615)
-|.-. ++..+.++..|.+..|-..++-++|-++....+.-...-+-.......+|.+.----..++.|..+.+
T Consensus 671 NPq~~----vlDtLsk~shd~D~eva~naIfamGLiGAGTnNARla~mLrqlaSYyyKd~~~Lf~vriAQGL~hlGK 743 (878)
T KOG2005|consen 671 NPQVN----VLDTLSKFSHDGDLEVAMNAIFAMGLIGAGTNNARLAQMLRQLASYYYKDSKALFVVRIAQGLVHLGK 743 (878)
T ss_pred CCcch----HHHHHHHhccCcchHHHHHHHHHhccccCCcchHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhcC
No 259
>PF07571 DUF1546: Protein of unknown function (DUF1546); InterPro: IPR011442 These proteins are associated with IPR004823 from INTERPRO in transcription initiation factor TFIID subunit 6 (TAF6).; GO: 0051090 regulation of sequence-specific DNA binding transcription factor activity, 0005634 nucleus
Probab=89.86 E-value=1.2 Score=33.97 Aligned_cols=69 Identities=16% Similarity=0.338 Sum_probs=49.3
Q ss_pred cCCchHHHHHHHHhHHHHhhhChH--hHHHHHHHHHHHhcCCc--chHHHHHHHHHHHHHHHHhChHHhhhchhHHH
Q psy14014 439 DSKWRVRLAIIEYMPLLAGQLGVE--FFDEKLNALCMTWLVDH--VYAIREAATLNLKKLVEQFGSEWAQSTVIPKV 511 (615)
Q Consensus 439 ~~~~~vr~~~~~~l~~l~~~~~~~--~~~~~l~~~l~~~l~d~--~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l 511 (615)
+..|.+|+.++..+..++..++.. ...+.+...+.+.+.|+ +...+-.|+..+..+ |++....-++|.+
T Consensus 17 ~~h~~LRd~AA~lL~~I~~~~~~~~~~L~~Ri~~tl~k~l~d~~~~~~t~YGAi~gL~~l----G~~~vr~~ilP~l 89 (92)
T PF07571_consen 17 DNHWALRDFAASLLAQICRKFSSSYPTLQPRITRTLLKALLDPKKPLGTHYGAIVGLSAL----GPEAVRALILPNL 89 (92)
T ss_pred cchHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH----HHHHHHHhhccCc
Confidence 568999999999999999999864 25567777777777765 455666677766665 5554444566654
No 260
>PF01603 B56: Protein phosphatase 2A regulatory B subunit (B56 family); InterPro: IPR002554 Protein phosphatase 2A (PP2A) is a major intracellular protein phosphatase that regulates multiple aspects of cell growth and metabolism. The ability of this widely distributed heterotrimeric enzyme to act on a diverse array of substrates is largely controlled by the nature of its regulatory B subunit. There are multiple families of B subunits, this family is called the B56 family [].; GO: 0008601 protein phosphatase type 2A regulator activity, 0007165 signal transduction, 0000159 protein phosphatase type 2A complex; PDB: 2NYM_B 2NYL_B 2IAE_E 2NPP_B 3FGA_B 2JAK_A.
Probab=89.57 E-value=26 Score=35.61 Aligned_cols=253 Identities=11% Similarity=0.082 Sum_probs=136.4
Q ss_pred hCCCCHHHHHHHHHHHHhhchhhcchh----hhhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchh--HHHHHHHHH
Q psy14014 336 VADPNQHVKSALASVIMGLSPILGKHN----TVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQ--QWRVRLAII 409 (615)
Q Consensus 336 ~~d~~~~vR~~~~~~l~~l~~~~g~~~----~~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~--~~~~~~~i~ 409 (615)
..+++|.--..+.+.+..+.+....+. +...++-.++.++..+++.-|......+..+...+... ..++..
T Consensus 99 ~~e~~WpHL~~vY~il~~~i~~~~~~~~~~~i~~~fi~~Ll~l~~S~D~rER~~lk~~l~~iy~k~~~~r~~Ir~~i--- 175 (409)
T PF01603_consen 99 FLEPSWPHLQLVYEILLRFIESPPFDPAKKYIDQKFIKKLLELFDSPDPRERDYLKTILHRIYGKFPNLRSFIRKSI--- 175 (409)
T ss_dssp ---TTHHHHHHHHHHHHHHHTSTT--CCTTTS-HHHHHHHHHTTTSSTHHHHHHHHHHHHHHHHH-TTTHHHHHHHH---
T ss_pred ccccccHhHHHHHHHHHHHHHCccccHHHHHcCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhhhHHHHHHHH---
Confidence 456677766666666666655443332 34466777888888899999998888887765433211 111110
Q ss_pred hhhhhhhhccccchhhhhhhhHHHHHhhh-cCCchHHHHHHHHhHHHHhhhCh---HhHHHHHHHHHHHhcCCcchH-HH
Q psy14014 410 EYMPLLAGQLGVEFFDEKLNALSIVELAE-DSKWRVRLAIIEYMPLLAGQLGV---EFFDEKLNALCMTWLVDHVYA-IR 484 (615)
Q Consensus 410 ~~l~~l~~~~~~~~~~~~l~~~~i~~~~~-~~~~~vr~~~~~~l~~l~~~~~~---~~~~~~l~~~l~~~l~d~~~~-vR 484 (615)
. ..+.+... ......-..+++.++.+...+.. +.....+...++.+...+... .-
T Consensus 176 -------------------~-~~~~~fi~e~~~~~gI~elLeil~sii~gf~~plk~eh~~fl~~vllPLh~~~~~~~y~ 235 (409)
T PF01603_consen 176 -------------------N-NIFYRFIYETERHNGIAELLEILGSIINGFAVPLKEEHKQFLRKVLLPLHKSPHLSSYH 235 (409)
T ss_dssp -------------------H-HHHHHHHHTTS--STHHHHHHHHHHHHTT--SS--HHHHHHHHHTTGGGGGSTGGGGTH
T ss_pred -------------------H-HHHHHHhcCcccccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 0 12222222 23333444566677777665542 222333334444444443322 23
Q ss_pred HHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhhHHH---hhHHHHHhhCCCCCchH
Q psy14014 485 EAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVTAN---FLLPTVLNMAGDNVANV 561 (615)
Q Consensus 485 ~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~~~---~i~~~l~~~~~D~~~~v 561 (615)
..-..++..++.. .+. ....++..++..-=-.++......+.-++.+.+.+++..+.. .+...+.++++.+...|
T Consensus 236 ~~L~~~~~~f~~k-dp~-l~~~~i~~llk~WP~t~s~Kev~FL~el~~il~~~~~~~f~~i~~~lf~~la~ci~S~h~qV 313 (409)
T PF01603_consen 236 QQLSYCVVQFLEK-DPS-LAEPVIKGLLKHWPKTNSQKEVLFLNELEEILEVLPPEEFQKIMVPLFKRLAKCISSPHFQV 313 (409)
T ss_dssp HHHHHHHHHHHHH--GG-GHHHHHHHHHHHS-SS-HHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHTSSSHHH
T ss_pred HHHHHHHHHHHHh-Cch-hHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCCHHH
Confidence 3334444444432 111 223355555554445566666777788888888888776654 45666667788889888
Q ss_pred HHHHHHHHH--HHhHhhh--hhhHHhhHHHHHhhhc-CCCCccHHHHHHHHHHHHhh
Q psy14014 562 RFNVAKTLQ--KIGPILE--TNVIQSQVKPALDKLN-GDTDVDVKYFAQEAISSIAD 613 (615)
Q Consensus 562 r~~a~~~l~--~l~~~~~--~~~~~~~~~~~l~~l~-~d~d~~v~~~a~~a~~~~~~ 613 (615)
-..|+..+. .+...+. .....+.+.+.+.+.. +.=+..||..|..+++.+.+
T Consensus 314 AErAl~~w~n~~~~~li~~~~~~i~p~i~~~L~~~~~~HWn~~Vr~~a~~vl~~l~~ 370 (409)
T PF01603_consen 314 AERALYFWNNEYFLSLISQNSRVILPIIFPALYRNSKNHWNQTVRNLAQNVLKILME 370 (409)
T ss_dssp HHHHHGGGGSHHHHHHHHCTHHHHHHHHHHHHSSTTSS-SSTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 777776663 2233322 2344566666666643 44488999999999988754
No 261
>PF11701 UNC45-central: Myosin-binding striated muscle assembly central; InterPro: IPR024660 The UNC-45 or small muscle protein 1 of Caenorhabditis elegans is expressed in two forms from different genomic positions in mammals: as a general tissue protein (UNC-45a) and as a specific form (UNC-45b) expressed only in striated and skeletal muscle. Myofibril formation requires both UNC-45 forms, consistent with the fact that the cytoskeleton is necessary for the development and maintenance of organised myofibrils []. Rng3 (Ring assembly protein 3), the homologue in Schizosaccharomyces pombe, is crucial for cell shape, normal actin cytoskeleton, and contractile ring assembly, and is essential for assembly of the myosin II-containing progenitors of the contractile ring. Widespread defects in the cytoskeleton are found in null mutants of all three fungal proteins []. Mammalian Unc45 is found to act as a specific chaperone during the folding of myosin and the assembly of striated muscle by forming a stable complex with the general chaperone Hsp90 []. All members carry up to three amino-terminal tetratricopeptide repeat (TPR) and a UCS domain at the C terminus that contains a number of Arm repeats. ; PDB: 3OPB_A 3NOW_A.
Probab=89.20 E-value=1.9 Score=36.90 Aligned_cols=131 Identities=14% Similarity=0.101 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhC--
Q psy14014 260 RVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVA-- 337 (615)
Q Consensus 260 ~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~-- 337 (615)
.+|..+.-++.++....+.+ ..+.+-..+...+.+.+.+-...++.++..+....+.-...-...+.+++.+..++.
T Consensus 20 ~~r~~a~v~l~k~l~~~~~~-~~~~~~~~i~~~~~~~~~d~~i~~~~~l~~lfp~~~dv~~~l~~~eg~~~~l~~~~~~~ 98 (157)
T PF11701_consen 20 EVRSHALVILSKLLDAAREE-FKEKISDFIESLLDEGEMDSLIIAFSALTALFPGPPDVGSELFLSEGFLESLLPLASRK 98 (157)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHCTTTHHHHHHHCCTTTHHHHHHHHHH-C
T ss_pred hHHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHccccchhHHHHHHHHHHHhCCCHHHHHHHHhhhhHHHHHHHHHhcc
Confidence 35555555555543222211 123344444445544444444556666665554332221111123456666666666
Q ss_pred CCCHHHHHHHHHHHHhhchhh-cchhhhhhhHHHHHHhhc-CCChh-HHHHHHHhhh
Q psy14014 338 DPNQHVKSALASVIMGLSPIL-GKHNTVDHLLPLFLSQLK-DECPE-VRLNIISNLD 391 (615)
Q Consensus 338 d~~~~vR~~~~~~l~~l~~~~-g~~~~~~~l~p~l~~~l~-d~~~~-vr~~a~~~l~ 391 (615)
..+..+..++++.+..-+..- ......++..+++.+.++ ++++. +|..|+-.|.
T Consensus 99 ~~~~~~~~~~lell~aAc~d~~~r~~I~~~~~~~L~~~~~~~~~~~~ir~~A~v~L~ 155 (157)
T PF11701_consen 99 SKDRKVQKAALELLSAACIDKSCRTFISKNYVSWLKELYKNSKDDSEIRVLAAVGLC 155 (157)
T ss_dssp TS-HHHHHHHHHHHHHHTTSHHHHHCCHHHCHHHHHHHTTTCC-HH-CHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccchHHHHHHHHHHHh
Confidence 677888888888886654321 223445677888999885 44555 7776665443
No 262
>KOG0889|consensus
Probab=89.17 E-value=78 Score=40.60 Aligned_cols=116 Identities=15% Similarity=0.105 Sum_probs=71.6
Q ss_pred hHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhh---hHhhhHHHHHHhhccCchhHHH----HHHHHHHH----
Q psy14014 164 VKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDY---LKTDIIPMFVNLAQDEQDSVRL----LAVEACVS---- 232 (615)
Q Consensus 164 ~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~---~~~~ll~~l~~~~~d~~~~vr~----~a~~~l~~---- 232 (615)
+..++++.+.++|.|+.|.-|...+..++.+....+... ...+++..+...++|-..++-. .+..++..
T Consensus 1030 i~~~l~~k~~~lCy~~~wy~k~gG~~gI~~l~~~~~~~~l~d~~~d~~~~l~fvl~d~~~e~~~~~~~~~~~~l~~ll~~ 1109 (3550)
T KOG0889|consen 1030 MFEYLLEKLCHLCYDSTWYAKDGGVNGIKCLIESMPSLWLLDFQVDILKALFFVLKDTESEVSSLPLDEAKDILMDILRV 1109 (3550)
T ss_pred hHHHHHHHHHHHhccHhHHHHcCCCceeeeehhhchHHHHHHHHHHHhhhHHHhhcCCccccccchHHHHHHHHHHHHHH
Confidence 457788888999999999999998888888877766321 2334555555555554332222 22222222
Q ss_pred HHhhcChh----hHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCcc
Q psy14014 233 IASLLSQS----DVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPE 279 (615)
Q Consensus 233 l~~~~~~~----~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~ 279 (615)
+......+ .....++..+...+.+|+..||..+.+.|..++...+..
T Consensus 1110 ~~~~~~~~~~~~~~~~~~~~~lv~eL~npN~~VR~~~~~~L~~i~~~s~~~ 1160 (3550)
T KOG0889|consen 1110 IFIDELAEEERAKSAMNVFSPLVLELFNPNSDVREFSQKLLRLISELSGKS 1160 (3550)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHcCCc
Confidence 21111111 112234445555567788899999999999999888665
No 263
>PF08767 CRM1_C: CRM1 C terminal; InterPro: IPR014877 CRM1 (also known as Exportin1) mediates the nuclear export of proteins bearing a leucine-rich nuclear export signal (NES). CRM1 forms a complex with the NES containing protein and the small GTPase Ran. This region forms an alpha helical structure formed by six helical hairpin motifs that are structurally similar to the HEAT repeat, but share little sequence similarity to the HEAT repeat []. ; PDB: 3M1I_C 3GB8_A 1W9C_A 3NC1_A 3NBY_D 3NBZ_D 3NC0_A 3GJX_D.
Probab=88.98 E-value=21 Score=34.85 Aligned_cols=135 Identities=11% Similarity=0.132 Sum_probs=83.2
Q ss_pred HHHHHHHHhHHHHhhhC-hHhHHHHHHHHHHHh-cC---CcchHHHH-HHHHHHHHHHHHhChH------HhhhchhHHH
Q psy14014 444 VRLAIIEYMPLLAGQLG-VEFFDEKLNALCMTW-LV---DHVYAIRE-AATLNLKKLVEQFGSE------WAQSTVIPKV 511 (615)
Q Consensus 444 vr~~~~~~l~~l~~~~~-~~~~~~~l~~~l~~~-l~---d~~~~vR~-~a~~~l~~l~~~~~~~------~~~~~i~~~l 511 (615)
+|...+..+..+.+... .+.....++|.+++. +. +..+..|+ ..+.++..++..++.. ...+.+....
T Consensus 43 iKkeIL~Li~t~i~~~~~~~~v~~~~i~~l~~~vL~DY~~~~p~~r~~evL~l~~~ii~kl~~~~~~~v~~I~~~vf~~T 122 (319)
T PF08767_consen 43 IKKEILKLIETFISKAEDPEEVANNFIPPLLDAVLGDYQNSVPDAREPEVLSLMATIINKLGELIQPQVPQILEAVFECT 122 (319)
T ss_dssp HHHHHHHHHHHHHHT-S-HHHHHHHTHHHHHHHHHHHHHHS-GGGS-HHHHHHHHHHHHHHGGGCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhcCCccccChhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 56667777777766554 333445566655552 22 23333333 2345556666665542 1223444455
Q ss_pred HhhhcC---CCchHHHHHHHHHHHHHhhhChhhH------HHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhh
Q psy14014 512 VAMSRD---QNYLHRMTCLFCINVLAEACGPTVT------ANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILET 578 (615)
Q Consensus 512 ~~~~~d---~~~~~R~~a~~~l~~l~~~~~~~~~------~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~ 578 (615)
+.+..+ .-|..|......+..+.+.+.+... -..++..+.-..+..+++|...++.++..+......
T Consensus 123 l~MI~~d~~~yPe~r~~ff~LL~~i~~~~f~~l~~lp~~~f~~~idsi~wg~kh~~~~I~~~~L~~l~~ll~~~~~ 198 (319)
T PF08767_consen 123 LPMINKDFEEYPEHRVNFFKLLRAINEHCFPALLQLPPEQFKLVIDSIVWGFKHTNREISETGLNILLELLNNVSK 198 (319)
T ss_dssp HHHHSSTSSSSHHHHHHHHHHHHHHHHHHTHHHHHS-HHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhhChHHHHHHHHHHHHHHHHhHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 555544 3578999999999999887654432 134556666678999999999999999999876643
No 264
>PF12765 Cohesin_HEAT: HEAT repeat associated with sister chromatid cohesion
Probab=88.90 E-value=0.68 Score=29.18 Aligned_cols=25 Identities=36% Similarity=0.389 Sum_probs=17.3
Q ss_pred hhHHHHHHHhhcCCcHHHHHHHHHH
Q psy14014 283 TDLVQAFQMLLKDSEAEVRAAAANK 307 (615)
Q Consensus 283 ~~l~~~l~~~l~d~~~~vr~~a~~~ 307 (615)
+.+...+...+.|+.+.||.+|+..
T Consensus 17 ~~v~~~i~~rl~D~s~~VR~aav~l 41 (42)
T PF12765_consen 17 SDVQSAIIRRLSDSSPSVREAAVDL 41 (42)
T ss_pred HHHHHHHHHHhcCCChHHHHHHHHH
Confidence 4566677777777777777776653
No 265
>PF08161 NUC173: NUC173 domain; InterPro: IPR012978 This is the central domain of a novel family of hypothetical nucleolar proteins [].
Probab=88.49 E-value=18 Score=32.34 Aligned_cols=36 Identities=17% Similarity=0.096 Sum_probs=25.0
Q ss_pred hHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHH
Q psy14014 367 LLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQW 402 (615)
Q Consensus 367 l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~ 402 (615)
++..+.++-.+++-..|..+-.+++..++.+|.+.+
T Consensus 42 ~L~~l~~lr~~~~f~~~~~~e~~lgaAi~amGpe~v 77 (198)
T PF08161_consen 42 ILKTLGDLRESEDFSFRKELEQVLGAAIRAMGPEQV 77 (198)
T ss_pred HHHHHHHHHcCCCcchHHHHHHHHHHHHHHCCHHHH
Confidence 333444444555667888888889988888887644
No 266
>KOG2022|consensus
Probab=88.35 E-value=43 Score=36.59 Aligned_cols=179 Identities=12% Similarity=0.071 Sum_probs=109.2
Q ss_pred HHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCc-----hhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHh----
Q psy14014 183 VRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQ-----DSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQC---- 253 (615)
Q Consensus 183 vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~-----~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~---- 253 (615)
-|+...+.+......++ +...+.+...+-+++.|.+ +..-++++..+..++++++... ...+|-+.+.
T Consensus 440 YR~diSD~~~~~Y~ilg-d~ll~~L~~~l~q~~aa~d~~p~s~~~tEaci~~~~sva~~~~~t~--~~~i~rl~~~~asi 516 (982)
T KOG2022|consen 440 YRKDISDLLMSSYSILG-DGLLDFLIDTLEQALAAGDEDPDSLNRTEACIFQFQSVAEYLGETE--STWIPRLFETSASI 516 (982)
T ss_pred HHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHHHHHHhhcCcch--hHHHHHHHHhcccc
Confidence 34444444444444344 2334455555666666555 5667888999999999998753 1223433332
Q ss_pred -cCCCChHHHHHHHHHHHHHHHHhCccc-hhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHH
Q psy14014 254 -SGDTSWRVRYMVADKFTDLQKAVGPEI-TKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPY 331 (615)
Q Consensus 254 -~~d~~~~vR~~~~~~l~~l~~~~~~~~-~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~ 331 (615)
.+-+++..-.++...+|..+..++++. ..+--+|++.+.+..+.. -..++..+..+++.++.+-. .+...++..
T Consensus 517 k~S~~n~ql~~Tss~~igs~s~~l~e~P~~ln~sl~~L~~~Lh~sk~--s~q~i~tl~tlC~~C~~~L~--py~d~~~a~ 592 (982)
T KOG2022|consen 517 KLSAPNPQLLSTSSDLIGSLSNWLGEHPMYLNPSLPLLFQGLHNSKE--SEQAISTLKTLCETCPESLD--PYADQFSAV 592 (982)
T ss_pred ccccCChhHHHHHHHHHHHHHHHHhcCCcccCchHHHHHHHhcCchH--HHHHHHHHHHHHHhhhhhCc--hHHHHHHHH
Confidence 233467778888899999999888764 345677888888864443 34567778888887654322 233444444
Q ss_pred HHHhhCC--CCHHHHHHHHHHHHhhchhhcchhhhhhhH
Q psy14014 332 VKDLVAD--PNQHVKSALASVIMGLSPILGKHNTVDHLL 368 (615)
Q Consensus 332 l~~~~~d--~~~~vR~~~~~~l~~l~~~~g~~~~~~~l~ 368 (615)
..+.++. .....|..+..++|.+......+...++++
T Consensus 593 ~~e~l~~~~~~~S~~~klm~sIGyvls~~~pEe~~kyl~ 631 (982)
T KOG2022|consen 593 CYEVLNKSNAKDSDRLKLMKSIGYVLSRLKPEEIPKYLM 631 (982)
T ss_pred HHHHhcccccCchHHHHHHHHHHHHHHhccHHhHHHHHH
Confidence 4444443 345678888888888877666544333333
No 267
>KOG4500|consensus
Probab=88.28 E-value=29 Score=34.50 Aligned_cols=111 Identities=14% Similarity=0.202 Sum_probs=72.0
Q ss_pred hhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhcccc--chhHHHHHhhHHHHHH-hhCCCCHHHHHHHHHHHHhhch-hh
Q psy14014 283 TDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAY--NQENIIMTYILPYVKD-LVADPNQHVKSALASVIMGLSP-IL 358 (615)
Q Consensus 283 ~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~--~~~~~~~~~l~p~l~~-~~~d~~~~vR~~~~~~l~~l~~-~~ 358 (615)
++++..+...+...+.+....+.-+++.|+..-..- .-++.+++.++..+.+ -..|.+-+++.+++.++..+.- +.
T Consensus 314 p~~l~~~~sw~~S~d~~l~t~g~LaigNfaR~D~~ci~~v~~~~~nkL~~~l~~~~~vdgnV~~qhA~lsALRnl~IPv~ 393 (604)
T KOG4500|consen 314 PQFLDFLESWFRSDDSNLITMGSLAIGNFARRDDICIQLVQKDFLNKLISCLMQEKDVDGNVERQHACLSALRNLMIPVS 393 (604)
T ss_pred cHHHHHHHHHhcCCchhHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhcCCCccchhHHHHHHHHHhccccCC
Confidence 357777788888888899999999999988742211 1112344555555544 3456677788899999987753 33
Q ss_pred cchhhhh-hhHHHHHHhhcCCChhHHHHHHHhhhHh
Q psy14014 359 GKHNTVD-HLLPLFLSQLKDECPEVRLNIISNLDCV 393 (615)
Q Consensus 359 g~~~~~~-~l~p~l~~~l~d~~~~vr~~a~~~l~~l 393 (615)
.+..+.+ -+...++.+++-..+.|....+.++..+
T Consensus 394 nka~~~~aGvteaIL~~lk~~~ppv~fkllgTlrM~ 429 (604)
T KOG4500|consen 394 NKAHFAPAGVTEAILLQLKLASPPVTFKLLGTLRMI 429 (604)
T ss_pred chhhccccchHHHHHHHHHhcCCcchHHHHHHHHHH
Confidence 3333322 3555677778777888877766655443
No 268
>KOG2973|consensus
Probab=88.21 E-value=24 Score=33.42 Aligned_cols=100 Identities=17% Similarity=0.163 Sum_probs=62.6
Q ss_pred HHHHhCCCChHHHHHHHHhHHHHHHHhchh---hhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcCh-hhHHHhHH
Q psy14014 172 FRNLCQDDTPMVRRAAAGKLGELAKVVEVD---YLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQ-SDVEQLVM 247 (615)
Q Consensus 172 l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~---~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~-~~~~~~l~ 247 (615)
+..++.+.+|.||+.+++.+..+... +-. ......++-+.++.+|..+ -+.|..++.+++..-.- +.....++
T Consensus 8 lv~ll~~~sP~v~~~AV~~l~~lt~~-~~~~~~~~~~~~lk~l~qL~~~~~~--~~~a~~alVnlsq~~~l~~~ll~~~~ 84 (353)
T KOG2973|consen 8 LVELLHSLSPPVRKAAVEHLLGLTGR-GLQSLSKYSEALLKDLTQLLKDLDP--AEPAATALVNLSQKEELRKKLLQDLL 84 (353)
T ss_pred HHHHhccCChHHHHHHHHHHhhcccc-chhhhccchhhhHHHHHHHccCccc--ccHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 35667889999999999877776554 211 1234577888889988877 44555666665543211 11122233
Q ss_pred HHHHHhcCCCChHHHHHHHHHHHHHHH
Q psy14014 248 PTLRQCSGDTSWRVRYMVADKFTDLQK 274 (615)
Q Consensus 248 ~~l~~~~~d~~~~vR~~~~~~l~~l~~ 274 (615)
..+...+.|+.|..-...+..+.++++
T Consensus 85 k~l~~~~~~p~~~lad~~cmlL~NLs~ 111 (353)
T KOG2973|consen 85 KVLMDMLTDPQSPLADLICMLLSNLSR 111 (353)
T ss_pred HHHHHHhcCcccchHHHHHHHHHHhcc
Confidence 344445678878777777777777664
No 269
>KOG1048|consensus
Probab=87.85 E-value=43 Score=36.01 Aligned_cols=146 Identities=10% Similarity=0.073 Sum_probs=93.4
Q ss_pred HHHHHHHHHhcC-CcchHHHHHHHHHHHHHHHHhCh-------HH-hhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhh
Q psy14014 466 EKLNALCMTWLV-DHVYAIREAATLNLKKLVEQFGS-------EW-AQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEA 536 (615)
Q Consensus 466 ~~l~~~l~~~l~-d~~~~vR~~a~~~l~~l~~~~~~-------~~-~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~ 536 (615)
+.++...+.++. ..+..+-++++.+|..+....+. .. .++..+|.+.+++..++..+-..++.++.+++..
T Consensus 517 p~vVr~Yl~Ll~~s~n~~TlEasaGaLQNltA~~~~~~~~~~~~v~~kekgl~~l~~ll~~~~~~vv~s~a~~LrNls~d 596 (717)
T KOG1048|consen 517 PSVVRPYLLLLALSKNDNTLEASAGALQNLTAGLWTWSEYMRGAVFRKEKGLPPLVELLRNDDSDVVRSAAGALRNLSRD 596 (717)
T ss_pred HHHHHHHHHHHHHhcchHHHHHhhhhHhhhhccCCcchhHHHhhhhhhccCccHHHHHHhcCCchHHHHHHHHHhhhccC
Confidence 456655555554 34667788888888888764332 11 3456889999999999999999999999999865
Q ss_pred hChh-hHHHhhHHHHHhhCCCCCc------hHHHHHHHHHHHHhHh-hh-h-hhHHh-hHHHHHhhhcCCCCccHHHHHH
Q psy14014 537 CGPT-VTANFLLPTVLNMAGDNVA------NVRFNVAKTLQKIGPI-LE-T-NVIQS-QVKPALDKLNGDTDVDVKYFAQ 605 (615)
Q Consensus 537 ~~~~-~~~~~i~~~l~~~~~D~~~------~vr~~a~~~l~~l~~~-~~-~-~~~~~-~~~~~l~~l~~d~d~~v~~~a~ 605 (615)
.... ....+.+|-|.+.+-+..+ +.-..++.+|..++.. .. + +.+.. .+..++.-...-..+.+-.+|.
T Consensus 597 ~rnk~ligk~a~~~lv~~Lp~~~~~~~~sedtv~~vc~tl~niv~~~~~nAkdl~~~~g~~kL~~I~~s~~S~k~~kaAs 676 (717)
T KOG1048|consen 597 IRNKELIGKYAIPDLVRCLPGSGPSTSLSEDTVRAVCHTLNNIVRKNVLNAKDLLEIKGIPKLRLISKSQHSPKEFKAAS 676 (717)
T ss_pred chhhhhhhcchHHHHHHhCcCCCCCcCchHHHHHHHHHhHHHHHHHhHHHHHHHHhccChHHHHHHhcccCCHHHHHHHH
Confidence 4433 3346788888888766554 6677788888888733 21 1 12222 2233222223344556666666
Q ss_pred HHHHHH
Q psy14014 606 EAISSI 611 (615)
Q Consensus 606 ~a~~~~ 611 (615)
.-+.++
T Consensus 677 ~vL~~l 682 (717)
T KOG1048|consen 677 SVLDVL 682 (717)
T ss_pred HHHHHH
Confidence 655554
No 270
>cd03565 VHS_Tom1 VHS domain family, Tom1 subfamily; The VHS domain is an essential part of Tom1 (Target of myb1 - retroviral oncogene) protein. The VHS domain has a superhelical structure similar to the structure of the ARM repeats and is present at the very N-termini of proteins. It is a right-handed superhelix of eight alpha helices. The VHS domain has been found in a number of proteins, some of which have been implicated in intracellular trafficking and sorting. The VHS domain of the Tom1 protein is essential for the negative regulation of Interleukin-1 and Tumor Necrosis Factor-induced signaling pathways.
Probab=87.53 E-value=16 Score=30.61 Aligned_cols=102 Identities=12% Similarity=0.156 Sum_probs=69.7
Q ss_pred cCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhc-CCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHH-
Q psy14014 254 SGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLK-DSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPY- 331 (615)
Q Consensus 254 ~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~-d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~- 331 (615)
+..++|..-..++..+.. ........+-.+.+.+. ..++.|...|+..+..+.++++.....+.....++..
T Consensus 14 l~~~dw~~ileicD~In~------~~~~~k~a~ralkkRl~~~~n~~v~l~aL~LLe~~vkNCG~~fh~eiask~Fl~e~ 87 (141)
T cd03565 14 LQSEDWGLNMEICDIINE------TEDGPKDAVRALKKRLNGNKNHKEVMLTLTVLETCVKNCGHRFHVLVAKKDFIKDV 87 (141)
T ss_pred CCCcCHHHHHHHHHHHhC------CCCcHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHhhhHH
Confidence 445677655544444332 11223467777777776 4688899999999999999998876655555667775
Q ss_pred HHHhhCC---CCHHHHHHHHHHHHhhchhhcch
Q psy14014 332 VKDLVAD---PNQHVKSALASVIMGLSPILGKH 361 (615)
Q Consensus 332 l~~~~~d---~~~~vR~~~~~~l~~l~~~~g~~ 361 (615)
|.+++.+ ....||.-++..+...+..+..+
T Consensus 88 L~~~i~~~~~~~~~Vk~kil~li~~W~~~f~~~ 120 (141)
T cd03565 88 LVKLINPKNNPPTIVQEKVLALIQAWADAFRGS 120 (141)
T ss_pred HHHHHcccCCCcHHHHHHHHHHHHHHHHHhCCC
Confidence 7777653 44688988888888777766543
No 271
>KOG2122|consensus
Probab=87.28 E-value=66 Score=37.58 Aligned_cols=332 Identities=16% Similarity=0.138 Sum_probs=165.8
Q ss_pred HhhhHHHHHHhhc---cCchhHHHHHHHHHHHHHhhcChhhH---HHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhC
Q psy14014 204 KTDIIPMFVNLAQ---DEQDSVRLLAVEACVSIASLLSQSDV---EQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVG 277 (615)
Q Consensus 204 ~~~ll~~l~~~~~---d~~~~vr~~a~~~l~~l~~~~~~~~~---~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~ 277 (615)
....+|++.+++- +++.+.|+.|-.+|-.++..-+++.. ...+++++.+. |..+-.+ ......-+
T Consensus 233 ~SgCLpLLvQilH~~d~~~kear~~A~aALHNIVhSqPD~kr~RRE~kvL~lLeQI--------raYC~~~-~~~lqar~ 303 (2195)
T KOG2122|consen 233 RSGCLPLLVQILHGPDDEDKEARKRASAALHNIVHSQPDEKRGRREKKVLHLLEQI--------RAYCETC-WTWLQARG 303 (2195)
T ss_pred hccchHHHHHHhhCCchhhHHHHHHHHHHHHHHhhcCcchhhhHHHHHHHHHHHHH--------HHHHHHH-HHHHHhcC
Confidence 4567788777763 44778999999999888776665432 22344444322 2222111 11111111
Q ss_pred ----ccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHH----hhCCC-CHHHHHHHH
Q psy14014 278 ----PEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKD----LVADP-NQHVKSALA 348 (615)
Q Consensus 278 ----~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~----~~~d~-~~~vR~~~~ 348 (615)
+.-....|.+.+..+++-.+.|-...|+.-|+.+-. +..++..-.. ..+|. .-.+|+-+.
T Consensus 304 ~~~apa~~~H~lcaA~~~lMK~SFDEEhR~aM~ELG~LqA-----------IaeLl~vDh~mhgp~tnd~~~~aLRrYa~ 372 (2195)
T KOG2122|consen 304 PAIAPASDEHQLCAALCTLMKLSFDEEHRHAMNELGGLQA-----------IAELLQVDHEMHGPETNDGECNALRRYAG 372 (2195)
T ss_pred CCCCCcccchhhHHHHHHHHHhhccHHHHHHHHHhhhHHH-----------HHHHHHHHHHhcCCCCCcHHHHHHHHHHH
Confidence 111122444555555555544433333333332211 0111111111 11221 346788888
Q ss_pred HHHHhhchhhcchh----h--hhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccc
Q psy14014 349 SVIMGLSPILGKHN----T--VDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVE 422 (615)
Q Consensus 349 ~~l~~l~~~~g~~~----~--~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~ 422 (615)
.+|.+|. +|... + ...++..++..|....+++.+-....|-.+ .|+-....-+++.. .|
T Consensus 373 MALTNLT--FGDv~NKa~LCs~rgfMeavVAQL~s~peeL~QV~AsvLRNL-------SWRAD~nmKkvLrE----~G-- 437 (2195)
T KOG2122|consen 373 MALTNLT--FGDVANKATLCSQRGFMEAVVAQLISAPEELLQVYASVLRNL-------SWRADSNMKKVLRE----TG-- 437 (2195)
T ss_pred HHhhccc--cccccchhhhhhhhhHHHHHHHHHhcChHHHHHHHHHHHHhc-------cccccccHHHHHHh----hh--
Confidence 8888773 34321 1 235677777776655444443333322222 12211100000100 00
Q ss_pred hhhhhhhhHHH-HHhhhcCCchHHHHHHHHhHHHHhhhCh---HhH-HHHHHHHHHHhcC----CcchHHHHHHHHHHHH
Q psy14014 423 FFDEKLNALSI-VELAEDSKWRVRLAIIEYMPLLAGQLGV---EFF-DEKLNALCMTWLV----DHVYAIREAATLNLKK 493 (615)
Q Consensus 423 ~~~~~l~~~~i-~~~~~~~~~~vr~~~~~~l~~l~~~~~~---~~~-~~~l~~~l~~~l~----d~~~~vR~~a~~~l~~ 493 (615)
....+ .-.++..+...-.+.+.+|..+...... ++. .+..+.+|..+|. .....+-+.|-..|..
T Consensus 438 ------sVtaLa~~al~~~kEsTLKavLSALWNLSAHcteNKA~iCaVDGALaFLVg~LSY~~qs~tLaIIEsaGGILRN 511 (2195)
T KOG2122|consen 438 ------SVTALAACALRNKKESTLKAVLSALWNLSAHCTENKAEICAVDGALAFLVGTLSYEGQSNTLAIIESAGGILRN 511 (2195)
T ss_pred ------hHHHHHHHHHHhcccchHHHHHHHHhhhhhcccccchhhhcccchHHHHHhhccccCCcchhhhhhcCccHHHH
Confidence 00011 1122333333444555555555433321 111 1233344444442 2233444555555555
Q ss_pred HHHHhC---hH--H-hhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhh---HHHhhHHHHHhhCCCCCchHHHH
Q psy14014 494 LVEQFG---SE--W-AQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTV---TANFLLPTVLNMAGDNVANVRFN 564 (615)
Q Consensus 494 l~~~~~---~~--~-~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~---~~~~i~~~l~~~~~D~~~~vr~~ 564 (615)
+...+. +. . .....+..|++.+++.+..+--++|.+|-++.-....+- +.....+.|.+++..++..+-..
T Consensus 512 VSS~IAt~E~yRQILR~~NCLq~LLQ~LKS~SLTiVSNaCGTLWNLSAR~p~DQq~LwD~gAv~mLrnLIhSKhkMIa~G 591 (2195)
T KOG2122|consen 512 VSSLIATCEDYRQILRRHNCLQTLLQHLKSHSLTIVSNACGTLWNLSARSPEDQQMLWDDGAVPMLRNLIHSKHKMIAMG 591 (2195)
T ss_pred HHhHhhccchHHHHHHHhhHHHHHHHHhhhcceEEeecchhhhhhhhcCCHHHHHHHHhcccHHHHHHHHhhhhhhhhhh
Confidence 544432 21 0 113467888888999988888889999999875544332 34567899999999999999999
Q ss_pred HHHHHHHHhHhh
Q psy14014 565 VAKTLQKIGPIL 576 (615)
Q Consensus 565 a~~~l~~l~~~~ 576 (615)
++.+|.++..+-
T Consensus 592 SaaALrNLln~R 603 (2195)
T KOG2122|consen 592 SAAALRNLLNFR 603 (2195)
T ss_pred HHHHHHHHhcCC
Confidence 999999987653
No 272
>cd03561 VHS VHS domain family; The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal Transducing Adaptor Molecule). It has a superhelical structure similar to that of the ARM (Armadillo) repeats and is present at the N-termini of proteins involved in intracellular membrane trafficking. There are four general groups of VHS domain containing proteins based on their association with other domains. The first group consists of proteins of the STAM/EAST/Hbp family which has the domain composition VHS-SH3-ITAM. The second consists of proteins with a FYVE domain C-terminal to VHS. The third consists of GGA proteins with a domain composition VHS-GAT (GGA and TOM)-GAE (gamma-adaptin ear) domain. The fourth consists of proteins with a VHS domain alone or with domains other than those mentioned above. In GGA proteins, VHS domains are involved in cargo recognition in trans-Golgi, thereby having a general me
Probab=86.99 E-value=15 Score=30.38 Aligned_cols=97 Identities=8% Similarity=-0.024 Sum_probs=64.9
Q ss_pred CCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHH---H-hHHHHHHH
Q psy14014 177 QDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVE---Q-LVMPTLRQ 252 (615)
Q Consensus 177 ~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~---~-~l~~~l~~ 252 (615)
.+++|..-...|+.+..- +....+.+..+...++++++.++..|+..+..+..+.|..-.. . ..+.-+..
T Consensus 14 ~~~D~~~il~icd~I~~~------~~~~k~a~raL~krl~~~n~~vql~AL~lLd~~vkNcg~~f~~~i~s~~fl~~l~~ 87 (133)
T cd03561 14 EEPDWALNLELCDLINLK------PNGPKEAARAIRKKIKYGNPHVQLLALTLLELLVKNCGKPFHLQVADKEFLLELVK 87 (133)
T ss_pred CCccHHHHHHHHHHHhCC------CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCChHHHHHHhhHHHHHHHHH
Confidence 456665555555444322 1123456777788888899999999999999999998873211 1 22333555
Q ss_pred hcCC---CChHHHHHHHHHHHHHHHHhCcc
Q psy14014 253 CSGD---TSWRVRYMVADKFTDLQKAVGPE 279 (615)
Q Consensus 253 ~~~d---~~~~vR~~~~~~l~~l~~~~~~~ 279 (615)
++.. .+..||..+.+.+...+..++.+
T Consensus 88 l~~~~~~~~~~Vk~kil~ll~~W~~~f~~~ 117 (133)
T cd03561 88 IAKNSPKYDPKVREKALELILAWSESFGGH 117 (133)
T ss_pred HhCCCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 5543 47789999999998888887764
No 273
>PF05536 Neurochondrin: Neurochondrin
Probab=86.73 E-value=46 Score=35.22 Aligned_cols=179 Identities=11% Similarity=0.104 Sum_probs=109.4
Q ss_pred ChHHHHHHHHhHHHHHHHhch----hhhHhhhHHHHHHhhccCch-hHHHHHHHHHHHHHhhcCh-hh-HHHhHHHHHHH
Q psy14014 180 TPMVRRAAAGKLGELAKVVEV----DYLKTDIIPMFVNLAQDEQD-SVRLLAVEACVSIASLLSQ-SD-VEQLVMPTLRQ 252 (615)
Q Consensus 180 ~~~vR~~a~~~l~~l~~~~~~----~~~~~~ll~~l~~~~~d~~~-~vr~~a~~~l~~l~~~~~~-~~-~~~~l~~~l~~ 252 (615)
....+.-++..+..++. .+ +...-.-+|.+.+.+..... ++-..|+++|..++..-.. +. .....++.+.+
T Consensus 70 ~~~~~~LavsvL~~f~~--~~~~a~~~~~~~~IP~Lle~l~~~s~~~~v~dalqcL~~Ias~~~G~~aLl~~g~v~~L~e 147 (543)
T PF05536_consen 70 PEEYLSLAVSVLAAFCR--DPELASSPQMVSRIPLLLEILSSSSDLETVDDALQCLLAIASSPEGAKALLESGAVPALCE 147 (543)
T ss_pred HHHHHHHHHHHHHHHcC--ChhhhcCHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHcCcHhHHHHHhcCCHHHHHH
Confidence 34556666667777765 22 12234567888888877666 8888899999988843222 11 12235666666
Q ss_pred hcCCCChHHHHHHHHHHHHHHHHhCccch------hhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhcccc----chhH
Q psy14014 253 CSGDTSWRVRYMVADKFTDLQKAVGPEIT------KTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAY----NQEN 322 (615)
Q Consensus 253 ~~~d~~~~vR~~~~~~l~~l~~~~~~~~~------~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~----~~~~ 322 (615)
...+ +......+...+..+....+.+.. ...+++.+...+......-+-..+..|..+....+.. ....
T Consensus 148 i~~~-~~~~~E~Al~lL~~Lls~~~~~~~~~~~~~l~~il~~La~~fs~~~~~~kfell~~L~~~L~~~~~~~~~~~~~~ 226 (543)
T PF05536_consen 148 IIPN-QSFQMEIALNLLLNLLSRLGQKSWAEDSQLLHSILPSLARDFSSFHGEDKFELLEFLSAFLPRSPILPLESPPSP 226 (543)
T ss_pred HHHh-CcchHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHhcCcCCccccccCChh
Confidence 6555 555677777777777665553211 1234555555555555555666777777777765311 1223
Q ss_pred HHHHhhHHHHHHhhCC-CCHHHHHHHHHHHHhhchhhcch
Q psy14014 323 IIMTYILPYVKDLVAD-PNQHVKSALASVIMGLSPILGKH 361 (615)
Q Consensus 323 ~~~~~l~p~l~~~~~d-~~~~vR~~~~~~l~~l~~~~g~~ 361 (615)
.+...+...+..++++ ..+.-|..+......+.+.+|.+
T Consensus 227 ~W~~~l~~gl~~iL~sr~~~~~R~~al~Laa~Ll~~~G~~ 266 (543)
T PF05536_consen 227 KWLSDLRKGLRDILQSRLTPSQRDPALNLAASLLDLLGPE 266 (543)
T ss_pred hhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhChH
Confidence 4556667777776665 45677777877777777777753
No 274
>PF12765 Cohesin_HEAT: HEAT repeat associated with sister chromatid cohesion
Probab=86.54 E-value=0.87 Score=28.70 Aligned_cols=25 Identities=12% Similarity=0.141 Sum_probs=14.5
Q ss_pred HhhHHHHHhhCCCCCchHHHHHHHH
Q psy14014 544 NFLLPTVLNMAGDNVANVRFNVAKT 568 (615)
Q Consensus 544 ~~i~~~l~~~~~D~~~~vr~~a~~~ 568 (615)
+.+...+.+.+.|+.+.||.++...
T Consensus 17 ~~v~~~i~~rl~D~s~~VR~aav~l 41 (42)
T PF12765_consen 17 SDVQSAIIRRLSDSSPSVREAAVDL 41 (42)
T ss_pred HHHHHHHHHHhcCCChHHHHHHHHH
Confidence 3455555666666666666665543
No 275
>PF09324 DUF1981: Domain of unknown function (DUF1981); InterPro: IPR015403 This domain is functionally uncharacterised and found in various plant and yeast protein transport proteins. It is noramlly associated with and C-termianl to the SEC7 domain. The SEC7 domain was named after the first protein found to contain such a region []. It has been shown to be linked with guanine nucleotide exchange function [, ].
Probab=86.44 E-value=5.8 Score=29.79 Aligned_cols=68 Identities=13% Similarity=0.110 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHH-hCCCChHHHHHHHHhHHHHHHHhch--hhhHhhhHHHHHHhhccCchhHHHHHHHHHH
Q psy14014 164 VKAELRSHFRNL-CQDDTPMVRRAAAGKLGELAKVVEV--DYLKTDIIPMFVNLAQDEQDSVRLLAVEACV 231 (615)
Q Consensus 164 ~~~~l~~~l~~l-~~d~~~~vR~~a~~~l~~l~~~~~~--~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~ 231 (615)
.++.++.-|..+ ....+.+||...++++..+....+. ...|..++.++....+|++..+-..|.+++.
T Consensus 14 fQ~~fL~Pf~~i~~~~~~~~vre~il~ci~qil~~~~~~i~SGW~~if~il~~aa~~~~e~lv~~af~~~~ 84 (86)
T PF09324_consen 14 FQKDFLKPFEYIMSNNPSIDVRELILECILQILQSRGENIKSGWKVIFSILRAAAKDNDESLVRLAFQIVQ 84 (86)
T ss_pred HHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHhCCCccHHHHHHHHHh
Confidence 445555545554 4557889999999999999886654 2347788999988888888888888877764
No 276
>KOG1851|consensus
Probab=86.31 E-value=76 Score=37.30 Aligned_cols=138 Identities=19% Similarity=0.233 Sum_probs=89.2
Q ss_pred hhcCCchHHHHHHHHhHHHH--hhhC-hHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHh
Q psy14014 437 AEDSKWRVRLAIIEYMPLLA--GQLG-VEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVA 513 (615)
Q Consensus 437 ~~~~~~~vr~~~~~~l~~l~--~~~~-~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~ 513 (615)
..+..|++|.+.+..+..+. ..++ .+.-.+.+.-.+...+.|...+||+.|+.++..+...-... +..........
T Consensus 1536 ~~~~tw~vr~avl~fl~~~vy~n~Fv~~~~~r~dI~~l~~s~l~D~~i~vre~Aa~~Lsgl~~~s~~~-~~~~k~d~~~~ 1614 (1710)
T KOG1851|consen 1536 ADSSTWRVRSAVLKFLQTVVYSNIFVSQELRRDDIRKLLESLLNDDQIEVREEAAKCLSGLLQGSKFQ-FVSDKRDTTSN 1614 (1710)
T ss_pred cccchHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHhccccc-cchHhhhhhhh
Confidence 35679999999998887764 2333 22334678888899999999999999999999987642111 11112222222
Q ss_pred h--hcCCCchHHHHHHHHHHHHHhhhChhh--HHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhh
Q psy14014 514 M--SRDQNYLHRMTCLFCINVLAEACGPTV--TANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPIL 576 (615)
Q Consensus 514 ~--~~d~~~~~R~~a~~~l~~l~~~~~~~~--~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~ 576 (615)
. ....+...+-.++.++|.++-.++... +.+..+..+.....|+ ..++..+.++++......
T Consensus 1615 ~~~s~s~~~i~~HgavlgLgA~VlafPy~vP~wip~~L~~Ls~fa~e~-~~i~~tvkktvseFrrth 1680 (1710)
T KOG1851|consen 1615 ILQSKSKDEIKAHGAVLGLGAIVLAFPYVVPLWIPKPLMNLSSFARES-AAIKQTVKKTVSEFRRTH 1680 (1710)
T ss_pred hhhhcchHHHHhhhhHHHHHHHHHhccccchhhhHHHHHHHHhhcCCc-hHHHHHHHHHHHHHHHHh
Confidence 1 223344455677888999886655432 3334444455555666 678889999998876554
No 277
>PF12231 Rif1_N: Rap1-interacting factor 1 N terminal; InterPro: IPR022031 This domain family is found in eukaryotes, and is typically between 135 and 146 amino acids in length. Rif1 is a protein which interacts with Rap1 to regulate telomere length. Interaction with telomeres limits their length. The N-terminal region contains many HEAT- and ARMADILLO- type repeats. These are helical folds which form extended curved proteins or RNA interface surfaces.
Probab=86.01 E-value=40 Score=33.77 Aligned_cols=68 Identities=10% Similarity=0.116 Sum_probs=42.7
Q ss_pred HHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhh------hhHHhhHHHHHhhhcCCCCc----cHHHHHHHHHH
Q psy14014 542 TANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILET------NVIQSQVKPALDKLNGDTDV----DVKYFAQEAIS 609 (615)
Q Consensus 542 ~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~------~~~~~~~~~~l~~l~~d~d~----~v~~~a~~a~~ 609 (615)
+.+..+.....+.+++++.+|..|..++..++-.... +...--..|+...+...... +++..+...+.
T Consensus 271 ~~n~wL~v~e~cFn~~d~~~k~~A~~aW~~liy~~~~~~~~~~k~l~lL~~Pl~~~l~~~~~~~~~~~~~~~ll~~l~ 348 (372)
T PF12231_consen 271 HLNEWLKVPEKCFNSSDPQVKIQAFKAWRRLIYASNPNELTSPKRLKLLCQPLSSQLRREKSSKTKEEVWWYLLYSLC 348 (372)
T ss_pred hHhHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCCccccHHHHHHHHHHHHHHhCccccccccHHHHHHHHHHHh
Confidence 3456677777788888888888888888888764431 22233345555555444444 66666655544
No 278
>cd03567 VHS_GGA VHS domain family, GGA subfamily; GGA (Golgi-localized, Gamma-ear-containing, Arf-binding) comprise a subfamily of ubiquitously expressed, monomeric, motif-binding cargo/clathrin adaptor proteins. The VHS domain has a superhelical structure similar to the structure of the ARM (Armadillo) repeats and is present at the N-termini of proteins. GGA proteins have a multidomain structure consisting of an N-terminal VHS domain linked by a short proline-rich linker to a GAT (GGA and TOM) domain, which is followed by a long flexible linker to the C-terminal appendage, GAE (gamma-adaptin ear) domain. The VHS domain of GGA proteins binds to the acidic-cluster dileucine (DxxLL) motif found on the cytoplasmic tails of cargo proteins trafficked between the trans-Golgi network and the endosomal system.
Probab=85.89 E-value=19 Score=29.97 Aligned_cols=96 Identities=8% Similarity=0.033 Sum_probs=64.8
Q ss_pred hhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhh----hchhHHHH
Q psy14014 437 AEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQ----STVIPKVV 512 (615)
Q Consensus 437 ~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~----~~i~~~l~ 512 (615)
+..++|..-..+++.+.. +.-|+ ...+..+.+.+++++..+...|+..+..+.+++|..+.. ..++..+.
T Consensus 14 l~~~dw~~ileicD~In~--~~~~~----k~a~rai~krl~~~n~~v~l~AL~LLe~~vkNCG~~fh~evas~~Fl~el~ 87 (139)
T cd03567 14 NREEDWEAIQAFCEQINK--EPEGP----QLAVRLLAHKIQSPQEKEALQALTVLEACMKNCGERFHSEVGKFRFLNELI 87 (139)
T ss_pred CCCCCHHHHHHHHHHHHc--CCccH----HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHHhHHHHHHHH
Confidence 345777655555554432 11122 234555777788999999999999999999999986532 44667777
Q ss_pred hhhcC------CCchHHHHHHHHHHHHHhhhC
Q psy14014 513 AMSRD------QNYLHRMTCLFCINVLAEACG 538 (615)
Q Consensus 513 ~~~~d------~~~~~R~~a~~~l~~l~~~~~ 538 (615)
.++.. .+..||...+..+......++
T Consensus 88 kl~~~k~~~~~~~~~Vk~kil~li~~W~~~f~ 119 (139)
T cd03567 88 KLVSPKYLGSRTSEKVKTKIIELLYSWTLELP 119 (139)
T ss_pred HHhccccCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 76643 466788888887777776553
No 279
>KOG2081|consensus
Probab=85.76 E-value=46 Score=34.31 Aligned_cols=146 Identities=14% Similarity=0.163 Sum_probs=73.7
Q ss_pred HHHHHHHHHhCCC---ChHHHHHHHHhHHHHHH--HhchhhhHh--hhHHHHHHhhccCchhHHHHHHHHHHHHHhhcCh
Q psy14014 167 ELRSHFRNLCQDD---TPMVRRAAAGKLGELAK--VVEVDYLKT--DIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQ 239 (615)
Q Consensus 167 ~l~~~l~~l~~d~---~~~vR~~a~~~l~~l~~--~~~~~~~~~--~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~ 239 (615)
.++..+..++++. +..+=..+.++++...+ .++++.... .++......++ .......|.+++..+....-.
T Consensus 153 ~~L~~l~~lLe~~~l~~~~~l~~Vl~~l~SWl~~~~~~~d~v~a~~pLi~l~F~sl~--~~~lhe~At~cic~ll~~~~~ 230 (559)
T KOG2081|consen 153 KVLVFLSDLLERSDLKSSDDLEQVLRCLGSWLRLHVFPPDQVLASFPLITLAFRSLS--DDELHEEATECICALLYCSLD 230 (559)
T ss_pred HHHHHHHHHHhhcCCChhhHHHHHHHHHhhhhhhccCCHHHHHhhhHHHHHHHHHcc--cchhhHHHHHHHHHHHHHhhh
Confidence 3444555555543 24555667777777766 333332221 34555555555 445666677766655433221
Q ss_pred -hh---HHH------hHHHHHHH-hcCCCChHHHHHHHHHHHHHHHHhCccch--hhh---HHHHHHHhhcCCcHHHHHH
Q psy14014 240 -SD---VEQ------LVMPTLRQ-CSGDTSWRVRYMVADKFTDLQKAVGPEIT--KTD---LVQAFQMLLKDSEAEVRAA 303 (615)
Q Consensus 240 -~~---~~~------~l~~~l~~-~~~d~~~~vR~~~~~~l~~l~~~~~~~~~--~~~---l~~~l~~~l~d~~~~vr~~ 303 (615)
+. +.+ .++|.... .....+..-+++.+..|..+++.+-.... .+. ++..++-...+++.+|-+.
T Consensus 231 ~~~~~~~~~~l~~~v~~L~~~~~~a~~~~d~d~~~a~~RIFtel~eaf~~~i~~np~~~l~~vellLl~~~h~~~evie~ 310 (559)
T KOG2081|consen 231 RSEGLPLAAILFIGVIILETAFHLAMAGEDLDKNEAICRIFTELGEAFVVLISTNPEEFLRIVELLLLVAGHNDTEVIEA 310 (559)
T ss_pred hhccCchhHHHhccccccchHHHHhhcccCHHHHHHHHHHHHHHHHHHHHHHhhCCCcchhHHHHHHHhccCCchhhhhh
Confidence 11 111 12222222 22334555777788888877765432211 122 3344455556777777766
Q ss_pred HHHHHHHHHhh
Q psy14014 304 AANKVRDFCQN 314 (615)
Q Consensus 304 a~~~l~~~~~~ 314 (615)
.....-.+.+.
T Consensus 311 SF~fW~~lse~ 321 (559)
T KOG2081|consen 311 SFNFWYSLSEE 321 (559)
T ss_pred hHHhhhhhHHH
Confidence 66555555443
No 280
>cd07064 AlkD_like_1 A new structural DNA glycosylase containing HEAT-like repeats. This domain represents a new and uncharacterized structural superfamily of DNA glycosylases that form an alpha-alpha superhelix fold that are not belong to the identified five structural DNA glycosylase superfamilies (UDG, AAG/MNPG, MutM/Fpg and helix-hairpin-helix). DNA glycosylases removing alkylated base residues have been identified in all organisms investigated and may be universally present in nature. DNA glycosylases catalyze the first step in Base Excision Repair (BER) pathway by cleaving damaged DNA bases within double strand DNA to produce an abasic site. The resulting abasic site is further processed by AP endonuclease, phosphodiesterase, DNA polymerases, and DNA ligase functions to restore the DNA to an undamaged state. All glycosylase examined to date utilize a similar strategy for binding DNA and base flipping despite their structural diversity. The known structures for members of this fa
Probab=85.65 E-value=27 Score=31.54 Aligned_cols=133 Identities=11% Similarity=0.137 Sum_probs=86.7
Q ss_pred hhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCC-CChHHHHHHHHH-HHHHHHHhCccchhh
Q psy14014 206 DIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGD-TSWRVRYMVADK-FTDLQKAVGPEITKT 283 (615)
Q Consensus 206 ~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d-~~~~vR~~~~~~-l~~l~~~~~~~~~~~ 283 (615)
........+.+++..+.|..|+..+...-.....+ -++.+...+.+ .+|.+-...+.. +|.+... .+
T Consensus 46 ~~~~l~~~Lw~~~~~E~r~~al~~l~~~~~~~~~~-----~~~~~~~~l~~~~~Wd~vD~~~~~i~g~~~~~------~~ 114 (208)
T cd07064 46 ELWELVLELWQQPEREYQYVAIDLLRKYKKFLTPE-----DLPLLEELITTKSWWDTVDSLAKVVGGILLAD------YP 114 (208)
T ss_pred HHHHHHHHHHcchHHHHHHHHHHHHHHHHhcCCHH-----HHHHHHHHHcCCchHHHHHHHHHHHhHHHHhC------Ch
Confidence 44555666777788889999888877755444433 24444445544 456654443332 3333221 23
Q ss_pred hHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchh
Q psy14014 284 DLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPI 357 (615)
Q Consensus 284 ~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~ 357 (615)
.+.+.+.....+++.-+|..|+-+.-.+.+... .+.+...+..++.|++.-|+.++.++|..++..
T Consensus 115 ~~~~~l~~W~~s~~~W~rR~ai~~~l~~~~~~~--------~~~l~~~~~~~~~d~e~fI~KAiGW~LRe~~k~ 180 (208)
T cd07064 115 EFEPVMDEWSTDENFWLRRTAILHQLKYKEKTD--------TDLLFEIILANLGSKEFFIRKAIGWALREYSKT 180 (208)
T ss_pred hHHHHHHHHHcCCcHHHHHHHHHHHHHHHHccC--------HHHHHHHHHHhCCChHHHHHHHHHHHHHHHhcc
Confidence 556788888999998888888876544444211 244566677789999999999999999887653
No 281
>smart00802 UME Domain in UVSB PI-3 kinase, MEI-41 and ESR-1. Characteristic domain in UVSP PI-3 kinase, MEI-41 and ESR-1. Found in nucleolar proteins. Associated with FAT, FATC, PI3_PI4_kinase modules.
Probab=85.46 E-value=11 Score=29.74 Aligned_cols=61 Identities=11% Similarity=0.171 Sum_probs=46.0
Q ss_pred CchHHHHHHHHHHHHHhhhChhh--HHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhhH
Q psy14014 519 NYLHRMTCLFCINVLAEACGPTV--TANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVI 581 (615)
Q Consensus 519 ~~~~R~~a~~~l~~l~~~~~~~~--~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~ 581 (615)
....|..++.+++.+.+..++.. +.+++...|...+. .++.|..+.+++..++..++.+..
T Consensus 28 ~~~ek~~~i~ai~~lI~~~g~~i~~a~pQI~acL~saL~--~~eL~~~al~~W~~~i~~L~~~~l 90 (107)
T smart00802 28 PYNEKKRALRSIGFLIKLMGKHISSALPQIMACLQSALE--IPELRSLALRCWHVLIKTLKEEEL 90 (107)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--chhHHHHHHHHHHHHHHhCCHHHH
Confidence 34568899999999998766533 34566666666665 556999999999999998876544
No 282
>PF08767 CRM1_C: CRM1 C terminal; InterPro: IPR014877 CRM1 (also known as Exportin1) mediates the nuclear export of proteins bearing a leucine-rich nuclear export signal (NES). CRM1 forms a complex with the NES containing protein and the small GTPase Ran. This region forms an alpha helical structure formed by six helical hairpin motifs that are structurally similar to the HEAT repeat, but share little sequence similarity to the HEAT repeat []. ; PDB: 3M1I_C 3GB8_A 1W9C_A 3NC1_A 3NBY_D 3NBZ_D 3NC0_A 3GJX_D.
Probab=85.10 E-value=39 Score=32.92 Aligned_cols=136 Identities=11% Similarity=0.147 Sum_probs=75.8
Q ss_pred HHHHHHHHhHHHHHHHhch-hhhHhhhHHHHHH-hh---ccCchhHHHH-HHHHHHHHHhhcChh------hHHHhHHHH
Q psy14014 182 MVRRAAAGKLGELAKVVEV-DYLKTDIIPMFVN-LA---QDEQDSVRLL-AVEACVSIASLLSQS------DVEQLVMPT 249 (615)
Q Consensus 182 ~vR~~a~~~l~~l~~~~~~-~~~~~~ll~~l~~-~~---~d~~~~vr~~-a~~~l~~l~~~~~~~------~~~~~l~~~ 249 (615)
.+|+..++.+..+.+..++ +.....++|.+.. .+ ++..+..|.. .+..+..++..++.. .+...++..
T Consensus 42 ~iKkeIL~Li~t~i~~~~~~~~v~~~~i~~l~~~vL~DY~~~~p~~r~~evL~l~~~ii~kl~~~~~~~v~~I~~~vf~~ 121 (319)
T PF08767_consen 42 TIKKEILKLIETFISKAEDPEEVANNFIPPLLDAVLGDYQNSVPDAREPEVLSLMATIINKLGELIQPQVPQILEAVFEC 121 (319)
T ss_dssp HHHHHHHHHHHHHHHT-S-HHHHHHHTHHHHHHHHHHHHHHS-GGGS-HHHHHHHHHHHHHHGGGCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhcCCccccChhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 4555666666655554442 2223334433332 22 3344555542 233444555544431 222233333
Q ss_pred HHHhcC-C--CChHHHHHHHHHHHHHHHHhCccc------hhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccc
Q psy14014 250 LRQCSG-D--TSWRVRYMVADKFTDLQKAVGPEI------TKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDA 317 (615)
Q Consensus 250 l~~~~~-d--~~~~vR~~~~~~l~~l~~~~~~~~------~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~ 317 (615)
....+. | .-+..|....+.+..+....-... .-..++..+...+++++.+|-..++.++..+...+..
T Consensus 122 Tl~MI~~d~~~yPe~r~~ff~LL~~i~~~~f~~l~~lp~~~f~~~idsi~wg~kh~~~~I~~~~L~~l~~ll~~~~~ 198 (319)
T PF08767_consen 122 TLPMINKDFEEYPEHRVNFFKLLRAINEHCFPALLQLPPEQFKLVIDSIVWGFKHTNREISETGLNILLELLNNVSK 198 (319)
T ss_dssp HHHHHSSTSSSSHHHHHHHHHHHHHHHHHHTHHHHHS-HHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhChHHHHHHHHHHHHHHHHhHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 333333 2 247899999988888876543211 1235667778888999999999999999999887654
No 283
>KOG4500|consensus
Probab=85.07 E-value=43 Score=33.34 Aligned_cols=143 Identities=9% Similarity=0.006 Sum_probs=86.6
Q ss_pred HHHHHhhhcCCchHHHHHHHHhHHHHhhhCh--HhHHHHHHHHHHHhc-----CCcchHHHHHHHHHHHHHHHHhChH--
Q psy14014 431 LSIVELAEDSKWRVRLAIIEYMPLLAGQLGV--EFFDEKLNALCMTWL-----VDHVYAIREAATLNLKKLVEQFGSE-- 501 (615)
Q Consensus 431 ~~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~--~~~~~~l~~~l~~~l-----~d~~~~vR~~a~~~l~~l~~~~~~~-- 501 (615)
..+..|+.+.+......+.-+++.++..=.. .+....++..++..+ .|.+..+..+++.++..+.--....
T Consensus 318 ~~~~sw~~S~d~~l~t~g~LaigNfaR~D~~ci~~v~~~~~nkL~~~l~~~~~vdgnV~~qhA~lsALRnl~IPv~nka~ 397 (604)
T KOG4500|consen 318 DFLESWFRSDDSNLITMGSLAIGNFARRDDICIQLVQKDFLNKLISCLMQEKDVDGNVERQHACLSALRNLMIPVSNKAH 397 (604)
T ss_pred HHHHHHhcCCchhHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhcCCCccchhHHHHHHHHHhccccCCchhh
Confidence 3566778888888888888889988764322 233344555555443 4678888899999998886433221
Q ss_pred HhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhhH------HHhhHHHHHhhCCCCCch-HHHHHHHHHHHHhH
Q psy14014 502 WAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVT------ANFLLPTVLNMAGDNVAN-VRFNVAKTLQKIGP 574 (615)
Q Consensus 502 ~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~------~~~i~~~l~~~~~D~~~~-vr~~a~~~l~~l~~ 574 (615)
+..--+...++.+++...|++....+.++.-+...- ++. ....+..|..-.+.+|.. |-....+.+..+++
T Consensus 398 ~~~aGvteaIL~~lk~~~ppv~fkllgTlrM~~d~q--e~~a~eL~kn~~l~ekLv~Wsks~D~aGv~gESnRll~~lIk 475 (604)
T KOG4500|consen 398 FAPAGVTEAILLQLKLASPPVTFKLLGTLRMIRDSQ--EYIACELAKNPELFEKLVDWSKSPDFAGVAGESNRLLLGLIK 475 (604)
T ss_pred ccccchHHHHHHHHHhcCCcchHHHHHHHHHHHhch--HHHHHHHhcCHHHHHHHHHhhhCCccchhhhhhhHHHHHHHH
Confidence 222235556777777777777666555555443221 111 123344445555666665 77777777776665
Q ss_pred h
Q psy14014 575 I 575 (615)
Q Consensus 575 ~ 575 (615)
+
T Consensus 476 H 476 (604)
T KOG4500|consen 476 H 476 (604)
T ss_pred h
Confidence 5
No 284
>cd03569 VHS_Hrs_Vps27p VHS domain family, Hrs and Vps27p subfamily; composed of Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and its yeast homolog Vps27p (vacuolar protein sorting). The VHS domain, an essential part of Hrs/Vps27p, has a superhelical structure similar to the structure of ARM (Armadillo) repeats and is present at the N-termini of proteins. Hrs also contains a FYVE (Fab1p, YOTB, Vac1p, and EEA1) zinc finger domain C-terminal to VHS, as well as two coiled-coil domains. Hrs has been proposed to play a role in at least three vesicle trafficking events: exocytosis, endocytosis, and endosome to lysosome trafficking. Hrs is involved in promoting rapid recycling of endocytosed signaling receptors to the plasma membrane.
Probab=84.91 E-value=22 Score=29.80 Aligned_cols=109 Identities=11% Similarity=0.014 Sum_probs=70.7
Q ss_pred CCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhH----HHhHHHHHHH
Q psy14014 177 QDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDV----EQLVMPTLRQ 252 (615)
Q Consensus 177 ~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~----~~~l~~~l~~ 252 (615)
.+++|..-..+|+.+..- +....+.+-.+.+.+++.++.+...|+..+..+.++.|..-. ...++..+.+
T Consensus 18 ~~~dw~~ileicD~In~~------~~~~k~a~ral~krl~~~n~~vql~AL~LLe~~vkNCG~~fh~evas~~fl~~l~~ 91 (142)
T cd03569 18 GEPDLASILEICDMIRSK------DVQPKYAMRALKKRLLSKNPNVQLYALLLLESCVKNCGTHFHDEVASREFMDELKD 91 (142)
T ss_pred CccCHHHHHHHHHHHhCC------CCCHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHCCHHHHHHHhhHHHHHHHHH
Confidence 455665555555544321 112345666777778889999999999999999999886322 2235555555
Q ss_pred hcC-CCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHH
Q psy14014 253 CSG-DTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQM 291 (615)
Q Consensus 253 ~~~-d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~ 291 (615)
++. .++..||..++..+...+..++.+.....+...+..
T Consensus 92 l~~~~~~~~Vk~kil~li~~W~~~f~~~~~l~~i~~~y~~ 131 (142)
T cd03569 92 LIKTTKNEEVRQKILELIQAWALAFRNKPQLKYVVDTYQI 131 (142)
T ss_pred HHcccCCHHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHH
Confidence 554 567889999999888888887765433344444433
No 285
>cd06561 AlkD_like A new structural DNA glycosylase. This domain represents a new and uncharacterized structural superfamily of DNA glycosylases that form an alpha-alpha superhelix fold that are not belong to the identified five structural DNA glycosylase superfamilies (UDG, AAG/MNPG, MutM/Fpg and helix-hairpin-helix). DNA glycosylases removing alkylated base residues have been identified in all organisms investigated and may be universally present in nature. DNA glycosylases catalyze the first step in Base Excision Repair (BER) pathway by cleaving damaged DNA bases within double strand DNA to produce an abasic site. The resulting abasic site is further processed by AP endonuclease, phosphodiesterase, DNA polymerases, and DNA ligase functions to restore the DNA to an undamaged state. All glycosylase examined to date utilize a similar strategy for binding DNA and base flipping despite their structural diversity.
Probab=84.90 E-value=28 Score=31.03 Aligned_cols=64 Identities=16% Similarity=0.167 Sum_probs=50.8
Q ss_pred HHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Q psy14014 209 PMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKA 275 (615)
Q Consensus 209 ~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~ 275 (615)
+.+.....+++..+|+++...+...... +.....+++.+.....|++..||.+.+.+|..++..
T Consensus 108 ~~~~~w~~s~~~~~rR~~~~~~~~~~~~---~~~~~~~l~~~~~~~~d~~~~Vqkav~w~L~~~~~~ 171 (197)
T cd06561 108 DLLEEWAKSENEWVRRAAIVLLLRLIKK---ETDFDLLLEIIERLLHDEEYFVQKAVGWALREYGKK 171 (197)
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHh---cccHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhh
Confidence 7788888899999999888777665544 233556788888888889999999999998888765
No 286
>COG5095 TAF6 Transcription initiation factor TFIID, subunit TAF6 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=84.88 E-value=17 Score=33.96 Aligned_cols=133 Identities=10% Similarity=0.138 Sum_probs=69.3
Q ss_pred hcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCc------HHHHHHHHHHHHHHHhhccccchhHHHHH
Q psy14014 253 CSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSE------AEVRAAAANKVRDFCQNLDAYNQENIIMT 326 (615)
Q Consensus 253 ~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~------~~vr~~a~~~l~~~~~~~~~~~~~~~~~~ 326 (615)
+++..+...|.++..++.. +-...+++|+|+..+.++- -++-.........++.+ +....+.+..
T Consensus 206 l~dEs~~~~r~aAl~sLr~-------dsGlhQLvPYFi~f~~eqit~Nl~nl~~LtTv~~m~~sLL~N--~~iFvdPY~h 276 (450)
T COG5095 206 LLDESDEQTRDAALESLRN-------DSGLHQLVPYFIHFFNEQITKNLKNLEKLTTVVMMYSSLLKN--KYIFVDPYLH 276 (450)
T ss_pred HHHHHHHHHHHHHHHHhcc-------CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CceeecHHHH
Confidence 3445567778887776654 2224578888887775532 11111111111112211 1111124566
Q ss_pred hhHHHHHHhh------CCC----CHHHHHHHHHHHHhhchhhcchh--hhhhhHHHHHHhhcC--CChhHHHHHHHhhhH
Q psy14014 327 YILPYVKDLV------ADP----NQHVKSALASVIMGLSPILGKHN--TVDHLLPLFLSQLKD--ECPEVRLNIISNLDC 392 (615)
Q Consensus 327 ~l~p~l~~~~------~d~----~~~vR~~~~~~l~~l~~~~g~~~--~~~~l~p~l~~~l~d--~~~~vr~~a~~~l~~ 392 (615)
+++|.+..++ +++ ...+|..++..++.++..++... ..+.+...+.+..-| .-.....+|+++++.
T Consensus 277 qlmPSilTcliakklg~~p~dhe~~alRd~AA~ll~yV~~~F~~~YktLkPRvtrTllKafLD~~k~~sT~YGalkgls~ 356 (450)
T COG5095 277 QLMPSILTCLIAKKLGNVPDDHEHYALRDVAADLLKYVFSNFSSSYKTLKPRVTRTLLKAFLDREKTESTQYGALKGLSI 356 (450)
T ss_pred HHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHhhhhHhhhhhchHHHHHHHHHHHhcccccchhhhhhhhhhh
Confidence 6777665432 332 35689999999888887776532 222333333333223 234567788877765
Q ss_pred hh
Q psy14014 393 VN 394 (615)
Q Consensus 393 l~ 394 (615)
+.
T Consensus 357 l~ 358 (450)
T COG5095 357 LS 358 (450)
T ss_pred hc
Confidence 53
No 287
>PF08569 Mo25: Mo25-like; InterPro: IPR013878 Mo25-like proteins are involved in both polarised growth and cytokinesis. In fission yeast Mo25 is localised alternately to the spindle pole body and to the site of cell division in a cell cycle dependent manner [, ]. ; PDB: 2WTK_A 1UPK_A 3GNI_A 1UPL_A.
Probab=83.73 E-value=46 Score=32.60 Aligned_cols=105 Identities=15% Similarity=0.192 Sum_probs=75.6
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHhC---hHHhh---hchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhCh-hh--
Q psy14014 471 LCMTWLVDHVYAIREAATLNLKKLVEQFG---SEWAQ---STVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGP-TV-- 541 (615)
Q Consensus 471 ~l~~~l~d~~~~vR~~a~~~l~~l~~~~~---~~~~~---~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~-~~-- 541 (615)
.+++....++.++-..|..++..+..... .++.. +.+......++.++|+.+|.-+++.||.+...-.. ..
T Consensus 168 ~ff~~~~~~~Fdiasdaf~t~~~llt~hk~~~a~fl~~n~d~ff~~~~~Ll~s~NYvtkrqslkLL~ellldr~n~~vm~ 247 (335)
T PF08569_consen 168 KFFKYVQLPNFDIASDAFSTFKELLTRHKKLVAEFLSNNYDRFFQKYNKLLESSNYVTKRQSLKLLGELLLDRSNFNVMT 247 (335)
T ss_dssp GHHHHTTSSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHCT-SSHHHHHHHHHHHHHHHHSGGGHHHHH
T ss_pred HHHHHhcCCccHhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCCeEeehhhHHHHHHHHHchhHHHHHH
Confidence 36777888999999999999988876422 22221 34666777889999999999999999999743211 11
Q ss_pred --H-HHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHh
Q psy14014 542 --T-ANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPI 575 (615)
Q Consensus 542 --~-~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~ 575 (615)
+ .+.-+..+..++.|+..++|..|...+..++..
T Consensus 248 ~yi~~~~nLkl~M~lL~d~sk~Iq~eAFhvFKvFVAN 284 (335)
T PF08569_consen 248 RYISSPENLKLMMNLLRDKSKNIQFEAFHVFKVFVAN 284 (335)
T ss_dssp HHTT-HHHHHHHHHHTT-S-HHHHHHHHHHHHHHHH-
T ss_pred HHHCCHHHHHHHHHHhcCcchhhhHHHHHHHHHHHhC
Confidence 1 245677888899999999999999999888754
No 288
>PF05536 Neurochondrin: Neurochondrin
Probab=82.87 E-value=69 Score=33.96 Aligned_cols=178 Identities=11% Similarity=0.165 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHH--HhCccchhhhHHHHHHHhhcCCcH-HHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhh
Q psy14014 260 RVRYMVADKFTDLQK--AVGPEITKTDLVQAFQMLLKDSEA-EVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLV 336 (615)
Q Consensus 260 ~vR~~~~~~l~~l~~--~~~~~~~~~~l~~~l~~~l~d~~~-~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~ 336 (615)
..+.-+...++.++. ....+...-.-+|.+...+..... ++...+...|..++. .++..........+|.+.+.+
T Consensus 72 ~~~~LavsvL~~f~~~~~~a~~~~~~~~IP~Lle~l~~~s~~~~v~dalqcL~~Ias--~~~G~~aLl~~g~v~~L~ei~ 149 (543)
T PF05536_consen 72 EYLSLAVSVLAAFCRDPELASSPQMVSRIPLLLEILSSSSDLETVDDALQCLLAIAS--SPEGAKALLESGAVPALCEII 149 (543)
T ss_pred HHHHHHHHHHHHHcCChhhhcCHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHc--CcHhHHHHHhcCCHHHHHHHH
Confidence 344445555555553 111112233568888888877666 888888888888884 233333334445667777666
Q ss_pred CCCCHHHHHHHHHHHHhhchhhcchhh------hhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhc--------hhHH
Q psy14014 337 ADPNQHVKSALASVIMGLSPILGKHNT------VDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIG--------IQQW 402 (615)
Q Consensus 337 ~d~~~~vR~~~~~~l~~l~~~~g~~~~------~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~--------~~~~ 402 (615)
.+ ++..+..+...+..+....+.+.. ...+++.+..........-+..++..|..+....+ ...|
T Consensus 150 ~~-~~~~~E~Al~lL~~Lls~~~~~~~~~~~~~l~~il~~La~~fs~~~~~~kfell~~L~~~L~~~~~~~~~~~~~~~W 228 (543)
T PF05536_consen 150 PN-QSFQMEIALNLLLNLLSRLGQKSWAEDSQLLHSILPSLARDFSSFHGEDKFELLEFLSAFLPRSPILPLESPPSPKW 228 (543)
T ss_pred Hh-CcchHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHhcCcCCccccccCChhhh
Confidence 65 566677777777766655553221 22344445544444444555555655555543221 1112
Q ss_pred HHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhc-CCchHHHHHHHHhHHHHhhhChHh
Q psy14014 403 RVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAED-SKWRVRLAIIEYMPLLAGQLGVEF 463 (615)
Q Consensus 403 ~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~-~~~~vr~~~~~~l~~l~~~~~~~~ 463 (615)
...+ . .-+..++++ ....-|..++.....+.+.+|.++
T Consensus 229 ~~~l----------------------~-~gl~~iL~sr~~~~~R~~al~Laa~Ll~~~G~~w 267 (543)
T PF05536_consen 229 LSDL----------------------R-KGLRDILQSRLTPSQRDPALNLAASLLDLLGPEW 267 (543)
T ss_pred HHHH----------------------H-HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhChHh
Confidence 2111 1 234444444 356678888888888888888765
No 289
>smart00567 EZ_HEAT E-Z type HEAT repeats. Present in subunits of cyanobacterial phycocyanin lyase, and other proteins. Probable scaffolding role.
Probab=82.25 E-value=1.8 Score=24.77 Aligned_cols=29 Identities=28% Similarity=0.163 Sum_probs=19.6
Q ss_pred hHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcC
Q psy14014 259 WRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKD 295 (615)
Q Consensus 259 ~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d 295 (615)
|.||..++.+|+.+.. +..++.+.+.++|
T Consensus 1 ~~vR~~aa~aLg~~~~--------~~a~~~L~~~l~d 29 (30)
T smart00567 1 PLVRHEAAFALGQLGD--------EEAVPALIKALED 29 (30)
T ss_pred CHHHHHHHHHHHHcCC--------HhHHHHHHHHhcC
Confidence 5678888888887632 4566667766665
No 290
>KOG0891|consensus
Probab=82.16 E-value=1.5e+02 Score=37.35 Aligned_cols=218 Identities=17% Similarity=0.171 Sum_probs=125.1
Q ss_pred HHHHHHHHHH-HhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHH
Q psy14014 165 KAELRSHFRN-LCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVE 243 (615)
Q Consensus 165 ~~~l~~~l~~-l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~ 243 (615)
.+.++..+.. ...|.++.+|......+. +...+....+..+-.....+.|+.-.++.++...++.++..-+
T Consensus 526 v~~vl~~ll~~aia~~~~~i~~~v~~~l~---~~~~~~laQ~~~lr~~~~al~~~~l~~~~~~~~~ig~l~~~~~----- 597 (2341)
T KOG0891|consen 526 VKEVLSALLTVAIADTDPDIRIRVLSSLN---ERFDAQLAQPDLLRLLFIALHDENFAIQELATVIIGRLSSYNP----- 597 (2341)
T ss_pred HHHHHHHHHHHhccCCCcchhhhHHhhhc---cchhhhhcCchhHHHHHHHhhhhhhhhHHhHHhhccccccccH-----
Confidence 3344444333 357888888877777665 2222222344555666667778888888888888887665433
Q ss_pred HhHHHHHH--------HhcCCCChHHHHHHHHHHHHHHHHhC--ccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHh
Q psy14014 244 QLVMPTLR--------QCSGDTSWRVRYMVADKFTDLQKAVG--PEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQ 313 (615)
Q Consensus 244 ~~l~~~l~--------~~~~d~~~~vR~~~~~~l~~l~~~~~--~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~ 313 (615)
.+++|.+. ++.-+...++....+.-+..+..... -......++-.+...+.|..+.+-.++..+++.++.
T Consensus 598 a~vl~~lr~~~l~~~s~l~~sg~~r~~~~~a~~~~~~i~~~~~~i~~~v~~~l~~~~~~~~~~~s~~~~~~~~~~~eL~~ 677 (2341)
T KOG0891|consen 598 AYVLPSLRKTLLELLTELEFSGMARTKEESAKLLCELIISSPVLISPYVGPILLVLLPKLQDPSSGVEKAVLETIGELCA 677 (2341)
T ss_pred HHHhHHHHHHHHHHhchhhhcchHHhHHHHHHHhhHHHHHHHHHHHhhcCchHHHHHHHHhccchhhHHHHHHHHHHHHH
Confidence 22333332 22222223333333333333222110 011123455666777788888898999999999998
Q ss_pred hccccchhHHHHHhhHHHHHHhhCCCC-HHHHHHHHHHHHhhchhhcc----hhhhhhhHHHHHHhhcCC-ChhHHHHHH
Q psy14014 314 NLDAYNQENIIMTYILPYVKDLVADPN-QHVKSALASVIMGLSPILGK----HNTVDHLLPLFLSQLKDE-CPEVRLNII 387 (615)
Q Consensus 314 ~~~~~~~~~~~~~~l~p~l~~~~~d~~-~~vR~~~~~~l~~l~~~~g~----~~~~~~l~p~l~~~l~d~-~~~vr~~a~ 387 (615)
..+.+.. .+.+.+++.+.+.+.|.+ ..-|.++.++++.+...-|- ....+.++..+...+..+ ...+|..++
T Consensus 678 v~g~~~~--~~~~~~~~~~~~~l~~~s~~~rr~aslk~l~~l~s~~~~~v~p~~~~P~ll~~l~~~~~te~~~~ir~~~v 755 (2341)
T KOG0891|consen 678 VGGEEMV--KWVDELFSLIIKMLQDQSSLGKRLAALKALGQLESSTGYVVDPYLDYPELLDILINILKTEQSSTIRREAI 755 (2341)
T ss_pred hccchhh--hccchHHHHHHHHHHHhhhhhchhHHHHHhhhhhcccceEecccccChHHHHHHHHHHhHhhhhHHHHHHH
Confidence 7764432 233466677777666644 45567788888888765442 222345555555555443 456777777
Q ss_pred HhhhH
Q psy14014 388 SNLDC 392 (615)
Q Consensus 388 ~~l~~ 392 (615)
+.++.
T Consensus 756 ~~~g~ 760 (2341)
T KOG0891|consen 756 RLLGL 760 (2341)
T ss_pred HHhhh
Confidence 76653
No 291
>PF14225 MOR2-PAG1_C: Cell morphogenesis C-terminal
Probab=81.36 E-value=48 Score=31.15 Aligned_cols=123 Identities=15% Similarity=0.128 Sum_probs=71.7
Q ss_pred HHHHHHHHhcCCcc-----hHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHHHHH-HHHHHhhhChh
Q psy14014 467 KLNALCMTWLVDHV-----YAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFC-INVLAEACGPT 540 (615)
Q Consensus 467 ~l~~~l~~~l~d~~-----~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~-l~~l~~~~~~~ 540 (615)
..+|.+...+.+++ ..++ ..+..+..+++.-|.. =+..+...+....++.+...+.. +..+.+.+.|+
T Consensus 111 a~LP~ll~~~d~~~~i~~~~~~~-~~A~~La~~a~~~~~~-----~La~il~~ya~~~fr~~~dfl~~v~~~l~~~f~P~ 184 (262)
T PF14225_consen 111 ALLPRLLHAFDDPNPIQPDQECI-EIAEALAQVAEAQGLP-----NLARILSSYAKGRFRDKDDFLSQVVSYLREAFFPD 184 (262)
T ss_pred HHHHHHHHHhcccccccccHHHH-HHHHHHHHHHHhCCCc-----cHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhCch
Confidence 35677777666665 3444 4446777777543322 23344444444444545444443 33344444333
Q ss_pred hHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhh--hhHHhhHHHHHhhhcCCC
Q psy14014 541 VTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILET--NVIQSQVKPALDKLNGDT 596 (615)
Q Consensus 541 ~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~--~~~~~~~~~~l~~l~~d~ 596 (615)
. ...++-.+..++..+-+.+|...+..|..+.+..+. +...+-+.|+++-+.+|-
T Consensus 185 ~-~~~~l~~Ll~lL~n~~~w~~~~~L~iL~~ll~~~d~~~~~~~dlispllrlL~t~~ 241 (262)
T PF14225_consen 185 H-EFQILTFLLGLLENGPPWLRRKTLQILKVLLPHVDMRSPHGADLISPLLRLLQTDL 241 (262)
T ss_pred h-HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHhccccCCCCcchHHHHHHHHHhCCcc
Confidence 2 334666678888888999999999999999988752 222333555555555544
No 292
>COG5537 IRR1 Cohesin [Cell division and chromosome partitioning]
Probab=80.92 E-value=39 Score=35.17 Aligned_cols=100 Identities=13% Similarity=0.017 Sum_probs=55.4
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhh----HHHhhH-
Q psy14014 473 MTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTV----TANFLL- 547 (615)
Q Consensus 473 ~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~----~~~~i~- 547 (615)
+....|-...+|..+...++.-+.....-+.....+.+.-.++.|.+..+|....+.+-.+....+... +.+...
T Consensus 281 vsRy~Dv~d~IRv~c~~~L~dwi~lvP~yf~k~~~lry~GW~LSDn~~~vRl~v~Kil~~L~s~~p~~d~ir~f~eRFk~ 360 (740)
T COG5537 281 VSRYIDVDDVIRVLCSMSLRDWIGLVPDYFRKILGLRYNGWSLSDNHEGVRLLVSKILLFLCSRIPHTDAIRRFVERFKD 360 (740)
T ss_pred hhhccchhHHHHHHHHHHHHHHHhcchHHHHhhhcccccccccccchHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Confidence 344556666677777666666665544433333344444456667777777777777766665543322 122222
Q ss_pred HHHHhhCCCCCchHHHHHHHHHHHHh
Q psy14014 548 PTVLNMAGDNVANVRFNVAKTLQKIG 573 (615)
Q Consensus 548 ~~l~~~~~D~~~~vr~~a~~~l~~l~ 573 (615)
-+|.-+..|.+- ||.++.+.+..+.
T Consensus 361 rILE~~r~D~d~-VRi~sik~l~~lr 385 (740)
T COG5537 361 RILEFLRTDSDC-VRICSIKSLCYLR 385 (740)
T ss_pred HHHHHHhhccch-hhHHHHHHHHHHH
Confidence 222233456666 7777777776654
No 293
>PF04078 Rcd1: Cell differentiation family, Rcd1-like ; InterPro: IPR007216 Rcd1 (Required cell differentiation 1) -like proteins are found among a wide range of organisms []. Rcd1 was initially identified as an essential factor in nitrogen starvation-invoked differentiation in fission yeast. This results largely from a defect in nitrogen starvation-invoked induction of ste11+, a key transcriptional factor gene required for the onset of sexual development. It is one of the most conserved proteins in eukaryotes, and its mammalian homologue is expressed in a variety of differentiating tissues [, ]. The mammalian Rcd1 is a novel transcriptional cofactor and is critical for retinoic acid-induced differentiation of F9 mouse teratocarcinoma cells, at least in part, via forming complexes with retinoic acid receptor and activation transcription factor-2 (ATF-2) []. Two of the members in this family have been characterised as being involved in regulation of Ste11 regulated sex genes [, ].; PDB: 2FV2_B.
Probab=80.55 E-value=49 Score=30.72 Aligned_cols=67 Identities=10% Similarity=0.103 Sum_probs=34.9
Q ss_pred hhHHHHHHHhhcCC-CcchhhhHHhhhhhhccCCChhhH-----HHHHHHHHHHhCCCChHHHHHHHHhHHHH
Q psy14014 128 AHFVPLVQRLASGD-WFTSRTSACGLFSVCYPRVTAGVK-----AELRSHFRNLCQDDTPMVRRAAAGKLGEL 194 (615)
Q Consensus 128 ~~~l~~l~~l~~~~-~~~~r~~a~~~l~~~~~~~~~~~~-----~~l~~~l~~l~~d~~~~vR~~a~~~l~~l 194 (615)
-++.|++.....+. ....|.++.+.++.+...-+.+.. .+++|.+.+.++..+..-|-.|...+..+
T Consensus 94 lyLyPfL~tt~k~r~~E~LRLtsLGVIgaLvK~d~~evi~fLl~tEiiplcLr~me~GselSKtvAtfIlqKI 166 (262)
T PF04078_consen 94 LYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKTDDPEVISFLLQTEIIPLCLRIMEFGSELSKTVATFILQKI 166 (262)
T ss_dssp GGGHHHHH----SHHHHHHHHHHHHHHHHHHTT--HHHHHHHHCTTHHHHHHHHHHHS-HHHHHHHHHHHHHH
T ss_pred hhehhhhhccccccccchhhHhHHHHHHHHHcCCcHHHHHHHHhhchHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 35677776555543 345677778888877765444433 34666666666555554444444444443
No 294
>KOG2122|consensus
Probab=80.54 E-value=1.3e+02 Score=35.50 Aligned_cols=70 Identities=13% Similarity=0.092 Sum_probs=53.9
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHH---hhhchhHHHHhhhcCCCchHHHHHHHHHHHHHh
Q psy14014 466 EKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEW---AQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAE 535 (615)
Q Consensus 466 ~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~---~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~ 535 (615)
..++..+++.|+.....+-..++.+|.+|......+. +..-.++.|.+++.+.+..+-+.++.++.++..
T Consensus 529 ~NCLq~LLQ~LKS~SLTiVSNaCGTLWNLSAR~p~DQq~LwD~gAv~mLrnLIhSKhkMIa~GSaaALrNLln 601 (2195)
T KOG2122|consen 529 HNCLQTLLQHLKSHSLTIVSNACGTLWNLSARSPEDQQMLWDDGAVPMLRNLIHSKHKMIAMGSAAALRNLLN 601 (2195)
T ss_pred hhHHHHHHHHhhhcceEEeecchhhhhhhhcCCHHHHHHHHhcccHHHHHHHHhhhhhhhhhhHHHHHHHHhc
Confidence 4577888888988888888889999988876643321 123367888899999988888888888888764
No 295
>PF12397 U3snoRNP10: U3 small nucleolar RNA-associated protein 10 ; InterPro: IPR022125 This domain family is found in eukaryotes, and is approximately 120 amino acids in length. The family is found in association with PF08146 from PFAM. This family is the protein associated with U3 snoRNA which is involved in the processing of pre-rRNA.
Probab=80.00 E-value=30 Score=27.95 Aligned_cols=70 Identities=16% Similarity=0.198 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhcC-CcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHh-hhcCCCchH-HHHHHHHHHHHHhhh
Q psy14014 465 DEKLNALCMTWLV-DHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVA-MSRDQNYLH-RMTCLFCINVLAEAC 537 (615)
Q Consensus 465 ~~~l~~~l~~~l~-d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~-~~~d~~~~~-R~~a~~~l~~l~~~~ 537 (615)
...++|.+.+.+. ....+.|.++...++.++....- .+.++..+.+ .+++..... ...++.++..+.+..
T Consensus 4 l~~lLP~l~~~L~~s~~~d~~~a~ymIl~~La~k~~L---~~~~l~~l~~~i~~~~~~~~~~~~~l~~L~~l~q~q 76 (121)
T PF12397_consen 4 LPRLLPFLLKGLKSSSSPDLQAAAYMILSVLASKVPL---SDEVLNALMESILKNWTQETVQRQALICLIVLCQSQ 76 (121)
T ss_pred HHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHhhcCC---cHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHcc
Confidence 4568888888888 77789999999999999887542 2334444433 233332221 345777788877554
No 296
>cd06561 AlkD_like A new structural DNA glycosylase. This domain represents a new and uncharacterized structural superfamily of DNA glycosylases that form an alpha-alpha superhelix fold that are not belong to the identified five structural DNA glycosylase superfamilies (UDG, AAG/MNPG, MutM/Fpg and helix-hairpin-helix). DNA glycosylases removing alkylated base residues have been identified in all organisms investigated and may be universally present in nature. DNA glycosylases catalyze the first step in Base Excision Repair (BER) pathway by cleaving damaged DNA bases within double strand DNA to produce an abasic site. The resulting abasic site is further processed by AP endonuclease, phosphodiesterase, DNA polymerases, and DNA ligase functions to restore the DNA to an undamaged state. All glycosylase examined to date utilize a similar strategy for binding DNA and base flipping despite their structural diversity.
Probab=79.97 E-value=43 Score=29.77 Aligned_cols=64 Identities=16% Similarity=0.141 Sum_probs=51.3
Q ss_pred HHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchh
Q psy14014 287 QAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPI 357 (615)
Q Consensus 287 ~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~ 357 (615)
+.+.....+++.-+|..+...+..+... + ...+.++..+..+..|++..||.++.++|..++..
T Consensus 108 ~~~~~w~~s~~~~~rR~~~~~~~~~~~~---~----~~~~~~l~~~~~~~~d~~~~Vqkav~w~L~~~~~~ 171 (197)
T cd06561 108 DLLEEWAKSENEWVRRAAIVLLLRLIKK---E----TDFDLLLEIIERLLHDEEYFVQKAVGWALREYGKK 171 (197)
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHh---c----ccHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhh
Confidence 7788888999999998888877665553 1 12567888888899999999999999999888765
No 297
>KOG2759|consensus
Probab=79.81 E-value=68 Score=31.91 Aligned_cols=177 Identities=15% Similarity=0.131 Sum_probs=86.5
Q ss_pred HHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHHHHHhCCCChHHHHHHH
Q psy14014 109 KAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQDDTPMVRRAAA 188 (615)
Q Consensus 109 ~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~~l~~d~~~~vR~~a~ 188 (615)
.++.++..+.++...++...+++.++-.+...+....+ ++.... ...+......++.++.+.++-+-....
T Consensus 65 ~~v~~fi~LlS~~~kdd~v~yvL~li~DmLs~d~sr~~-----lf~~~a----~~~k~~~~~~fl~ll~r~d~~iv~~~~ 135 (442)
T KOG2759|consen 65 QYVKTFINLLSHIDKDDTVQYVLTLIDDMLSEDRSRVD-----LFHDYA----HKLKRTEWLSFLNLLNRQDTFIVEMSF 135 (442)
T ss_pred HHHHHHHHHhchhhhHHHHHHHHHHHHHHHhhCchHHH-----HHHHHH----HhhhccchHHHHHHHhcCChHHHHHHH
Confidence 55566666777776666666666666555544322211 111000 011111234566777777777767666
Q ss_pred HhHHHHHHHhchhh---hHhhhHHHHHHhhcc-CchhHHHHHHHHHHHHHhhcCh------hhHHHhHHHHHHHhcCCCC
Q psy14014 189 GKLGELAKVVEVDY---LKTDIIPMFVNLAQD-EQDSVRLLAVEACVSIASLLSQ------SDVEQLVMPTLRQCSGDTS 258 (615)
Q Consensus 189 ~~l~~l~~~~~~~~---~~~~ll~~l~~~~~d-~~~~vr~~a~~~l~~l~~~~~~------~~~~~~l~~~l~~~~~d~~ 258 (615)
..+..++....... ........+...++. .+...+..|+.+|..+...-.- ......+++.+. .+..+
T Consensus 136 ~Ils~la~~g~~~~~~~e~~~~~~~l~~~l~~~~~~~~~~~~~rcLQ~ll~~~eyR~~~v~adg~~~l~~~l~--s~~~~ 213 (442)
T KOG2759|consen 136 RILSKLACFGNCKMELSELDVYKGFLKEQLQSSTNNDYIQFAARCLQTLLRVDEYRYAFVIADGVSLLIRILA--STKCG 213 (442)
T ss_pred HHHHHHHHhccccccchHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhcCcchhheeeecCcchhhHHHHh--ccCcc
Confidence 66666665432110 122233444444444 5666777778888776543211 011122344433 34445
Q ss_pred hHHHHHHHHHHHHHH--HHhCccchhhhHHHHHHHhhcCC
Q psy14014 259 WRVRYMVADKFTDLQ--KAVGPEITKTDLVQAFQMLLKDS 296 (615)
Q Consensus 259 ~~vR~~~~~~l~~l~--~~~~~~~~~~~l~~~l~~~l~d~ 296 (615)
.++.+..+.++-.+. ..+......-.+++.+.+.+++.
T Consensus 214 ~QlQYqsifciWlLtFn~~~ae~~~~~~li~~L~~Ivk~~ 253 (442)
T KOG2759|consen 214 FQLQYQSIFCIWLLTFNPHAAEKLKRFDLIQDLSDIVKES 253 (442)
T ss_pred hhHHHHHHHHHHHhhcCHHHHHHHhhccHHHHHHHHHHHH
Confidence 666776666655443 11111111224555555555443
No 298
>COG5537 IRR1 Cohesin [Cell division and chromosome partitioning]
Probab=79.69 E-value=84 Score=32.89 Aligned_cols=174 Identities=15% Similarity=0.070 Sum_probs=100.1
Q ss_pred HHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccch----hhh
Q psy14014 209 PMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEIT----KTD 284 (615)
Q Consensus 209 ~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~----~~~ 284 (615)
..+..-..|-++.+|-.++..+......+|.--+.-..+.+.-=.+.|.+..||....+.+..++..-+.... .+.
T Consensus 278 svfvsRy~Dv~d~IRv~c~~~L~dwi~lvP~yf~k~~~lry~GW~LSDn~~~vRl~v~Kil~~L~s~~p~~d~ir~f~eR 357 (740)
T COG5537 278 SVFVSRYIDVDDVIRVLCSMSLRDWIGLVPDYFRKILGLRYNGWSLSDNHEGVRLLVSKILLFLCSRIPHTDAIRRFVER 357 (740)
T ss_pred HHHhhhccchhHHHHHHHHHHHHHHHhcchHHHHhhhcccccccccccchHHHHHHHHHHHHHHHhcCCcchHHHHHHHH
Confidence 3455666788889999998888877766654322222233333357888999999999998888876543321 122
Q ss_pred HHHHHHHhh-cCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcc---
Q psy14014 285 LVQAFQMLL-KDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGK--- 360 (615)
Q Consensus 285 l~~~l~~~l-~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~--- 360 (615)
+..-++..+ .|.+. ||.++++.+..+-..-. +...-+..+..++-|..++-|....+.+..+++....
T Consensus 358 Fk~rILE~~r~D~d~-VRi~sik~l~~lr~lg~-------L~~SeIlIvsscmlDi~pd~r~~~~E~v~~icK~~aevik 429 (740)
T COG5537 358 FKDRILEFLRTDSDC-VRICSIKSLCYLRILGV-------LSSSEILIVSSCMLDIIPDSRENIVESVESICKIDAEVIK 429 (740)
T ss_pred HHHHHHHHHhhccch-hhHHHHHHHHHHHHhcc-------cchhHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 333333333 46665 99999998876554211 1122334455566777777665555555555543221
Q ss_pred ---hhh--hhhhHHHHHHhhcCCChhHHHHHHHhhh
Q psy14014 361 ---HNT--VDHLLPLFLSQLKDECPEVRLNIISNLD 391 (615)
Q Consensus 361 ---~~~--~~~l~p~l~~~l~d~~~~vr~~a~~~l~ 391 (615)
+.+ .+.++|.+.+....- ..|..+.+..+.
T Consensus 430 EKipl~~k~n~lL~a~~qgse~~-f~v~~~iFsr~~ 464 (740)
T COG5537 430 EKIPLATKTNRLLEAMKQGSERY-FVVCEEIFSRFV 464 (740)
T ss_pred hhcchhhhhhhHHHHHHhhhhcc-chhHHHHHHHHH
Confidence 111 245666666655432 245555554433
No 299
>smart00288 VHS Domain present in VPS-27, Hrs and STAM. Unpublished observations. Domain of unknown function.
Probab=79.22 E-value=35 Score=28.21 Aligned_cols=85 Identities=11% Similarity=0.086 Sum_probs=59.1
Q ss_pred hhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhH----HHhHHHHHHHhcCCCC--hHHHHHHHHHHHHHHHHhCc
Q psy14014 205 TDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDV----EQLVMPTLRQCSGDTS--WRVRYMVADKFTDLQKAVGP 278 (615)
Q Consensus 205 ~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~----~~~l~~~l~~~~~d~~--~~vR~~~~~~l~~l~~~~~~ 278 (615)
.+.+..+.+-+++.++.+...|+..+..+..+.|..-. ...++..+..+++++. ..||..+...+...+..++.
T Consensus 36 k~a~r~l~krl~~~n~~v~l~AL~lLe~~vkNcg~~f~~ev~s~~fl~~L~~l~~~~~~~~~Vk~kil~li~~W~~~f~~ 115 (133)
T smart00288 36 KDAVRLLKKRLNNKNPHVALLALTLLDACVKNCGSKFHLEVASKEFLNELVKLIKPKYPLPLVKKRILELIQEWADAFKN 115 (133)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHcC
Confidence 45667777888889999999999999999999886422 2235556666665532 33888888888888887765
Q ss_pred cchhhhHHHHH
Q psy14014 279 EITKTDLVQAF 289 (615)
Q Consensus 279 ~~~~~~l~~~l 289 (615)
+.....+...+
T Consensus 116 ~~~~~~i~~~y 126 (133)
T smart00288 116 DPDLSQIVDVY 126 (133)
T ss_pred CCCchHHHHHH
Confidence 44333444433
No 300
>PF00790 VHS: VHS domain; InterPro: IPR002014 The VHS domain is a ~140 residues long domain, whose name is derived from its occurrence in VPS-27, Hrs and STAM. Based on regions surrounding the domain, VHS-proteins can be divided into 4 groups []: STAM/EAST/Hbp which all share the domain composition VHS-SH3-ITAM and carry one or two ubiquitin-interacting motifs Proteins with a FYVE domain (IPR000306 from INTERPRO) C-terminal to VHS which also carry one or two ubiquitin-interacting motifs GGA proteins with a domain composition VHS-GAT (GGA and Tom1) homology domain VHS domain alone or in combination with domains other than those listed above The VHS domain is always found at the N- terminus of proteins suggesting that such topology is important for function. The domain is considered to have a general membrane targeting/cargo recognition role in vesicular trafficking []. Resolution of the crystal structure of the VHS domain of Drosophila Hrs and human Tom1 revealed that it consists of eight helices arranged in a double-layer superhelix []. The existence of conserved patches of residues on the domain surface suggests that VHS domains may be involved in protein-protein recognition and docking. Overall, sequence similarity is low (approx 25%) amongst domain family members.; GO: 0006886 intracellular protein transport; PDB: 1X5B_A 2L0T_B 1DVP_A 3LDZ_C 3ZYQ_A 4AVX_A 3G2U_A 3G2W_A 1UJJ_A 3G2V_A ....
Probab=79.02 E-value=37 Score=28.37 Aligned_cols=72 Identities=18% Similarity=0.199 Sum_probs=35.7
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhh----HhhhHHHHHHhhccCc--hh--HHHHHHHHHHHHHhhcC
Q psy14014 167 ELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYL----KTDIIPMFVNLAQDEQ--DS--VRLLAVEACVSIASLLS 238 (615)
Q Consensus 167 ~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~----~~~ll~~l~~~~~d~~--~~--vr~~a~~~l~~l~~~~~ 238 (615)
+....+.+-+.+.++.+...++..+..+.+..|.... ...++..+..++++.. .. ||..++..+...+..+.
T Consensus 42 ea~~~l~krl~~~~~~vq~~aL~lld~lvkNcg~~f~~ev~~~~fl~~l~~l~~~~~~~~~~~Vk~k~l~ll~~W~~~f~ 121 (140)
T PF00790_consen 42 EAARALRKRLKHGNPNVQLLALTLLDALVKNCGPRFHREVASKEFLDELVKLIKSKKTDPETPVKEKILELLQEWAEAFK 121 (140)
T ss_dssp HHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHHHTTTHHHSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHhHHHHHHHHHHHHccCCCCchhHHHHHHHHHHHHHHHHHC
Confidence 3334444445556666666666666666665554321 2234444444443221 11 55555555555555553
No 301
>KOG4199|consensus
Probab=78.70 E-value=65 Score=31.04 Aligned_cols=144 Identities=14% Similarity=0.107 Sum_probs=87.9
Q ss_pred HHHHHHhcCC-cchHHHHHHHHHHHHHHHHhChHHhh-----hchhHHHHhhh--cCCCchHHHHHHHHHHHHHhhhChh
Q psy14014 469 NALCMTWLVD-HVYAIREAATLNLKKLVEQFGSEWAQ-----STVIPKVVAMS--RDQNYLHRMTCLFCINVLAEACGPT 540 (615)
Q Consensus 469 ~~~l~~~l~d-~~~~vR~~a~~~l~~l~~~~~~~~~~-----~~i~~~l~~~~--~d~~~~~R~~a~~~l~~l~~~~~~~ 540 (615)
+..++..+.| ....+|+.+-.++..+...-|.+... ....+.+..+. ...+|.+-+.++.++..++-..+..
T Consensus 285 l~tl~~~i~d~n~~~~r~l~k~~lslLralAG~DsvKs~IV~~gg~~~ii~l~~~h~~~p~Vi~~~~a~i~~l~LR~pdh 364 (461)
T KOG4199|consen 285 LDTLLRCIDDSNEQGNRTLAKTCLSLLRALAGSDSVKSTIVEKGGLDKIITLALRHSDDPLVIQEVMAIISILCLRSPDH 364 (461)
T ss_pred HHHHHHHHhhhchhhHHHHHHHHHHHHHHHhCCCchHHHHHHhcChHHHHHHHHHcCCChHHHHHHHHHHHHHHhcCcch
Confidence 3456677777 44567766666666666555654332 22455565543 3457788888888888877543322
Q ss_pred ---hHHHhhHHHHHh-hCCCCCc-hHHHHHHHHHHHHhHhhh---hhhHHhhHHHHHhhhcCCCCccHHHHHHHHHHHHh
Q psy14014 541 ---VTANFLLPTVLN-MAGDNVA-NVRFNVAKTLQKIGPILE---TNVIQSQVKPALDKLNGDTDVDVKYFAQEAISSIA 612 (615)
Q Consensus 541 ---~~~~~i~~~l~~-~~~D~~~-~vr~~a~~~l~~l~~~~~---~~~~~~~~~~~l~~l~~d~d~~v~~~a~~a~~~~~ 612 (615)
.+....-....+ +...|.. .|+.++++.+.++..... ...+...++.++... ...+++++..|..|+..+.
T Consensus 365 sa~~ie~G~a~~avqAmkahP~~a~vQrnac~~IRNiv~rs~~~~~~~l~~GiE~Li~~A-~~~h~tce~~akaALRDLG 443 (461)
T KOG4199|consen 365 SAKAIEAGAADLAVQAMKAHPVAAQVQRNACNMIRNIVVRSAENRTILLANGIEKLIRTA-KANHETCEAAAKAALRDLG 443 (461)
T ss_pred HHHHHhcchHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHhhhhccchHHhccHHHHHHHH-HhcCccHHHHHHHHHHhcC
Confidence 222222222222 2344444 688899999999986543 234455566666555 4567899999999998875
Q ss_pred h
Q psy14014 613 D 613 (615)
Q Consensus 613 ~ 613 (615)
-
T Consensus 444 c 444 (461)
T KOG4199|consen 444 C 444 (461)
T ss_pred c
Confidence 3
No 302
>KOG1048|consensus
Probab=78.33 E-value=1e+02 Score=33.25 Aligned_cols=103 Identities=18% Similarity=0.210 Sum_probs=69.0
Q ss_pred HHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcchh---
Q psy14014 286 VQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHN--- 362 (615)
Q Consensus 286 ~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~~~--- 362 (615)
+|-.+.++...++.++..|...+..++..- .+.+.....-.=+|.+..++..++..|+..++.++.++. +|...
T Consensus 235 lpe~i~mL~~q~~~~qsnaaaylQHlcfgd-~~ik~~vrqlggI~kLv~Ll~~~~~evq~~acgaLRNLv--f~~~~~~N 311 (717)
T KOG1048|consen 235 LPEVISMLMSQDPSVQSNAAAYLQHLCFGD-NKIKSRVRQLGGIPKLVALLDHRNDEVQRQACGALRNLV--FGKSTDSN 311 (717)
T ss_pred cHHHHHHHhccChhhhHHHHHHHHHHHhhh-HHHHHHHHHhccHHHHHHHhcCCcHHHHHHHHHHHHhhh--cccCCccc
Confidence 444566777888888888887777766521 111112223334678889999999999999999999985 34322
Q ss_pred h----hhhhHHHHHHhhcC-CChhHHHHHHHhhh
Q psy14014 363 T----VDHLLPLFLSQLKD-ECPEVRLNIISNLD 391 (615)
Q Consensus 363 ~----~~~l~p~l~~~l~d-~~~~vr~~a~~~l~ 391 (615)
. ...=+|.+.++++. .|.+||..+-..|-
T Consensus 312 Klai~~~~Gv~~l~~~Lr~t~D~ev~e~iTg~LW 345 (717)
T KOG1048|consen 312 KLAIKELNGVPTLVRLLRHTQDDEVRELITGILW 345 (717)
T ss_pred chhhhhcCChHHHHHHHHhhcchHHHHHHHHHHh
Confidence 1 11236888888874 67888877665443
No 303
>cd03565 VHS_Tom1 VHS domain family, Tom1 subfamily; The VHS domain is an essential part of Tom1 (Target of myb1 - retroviral oncogene) protein. The VHS domain has a superhelical structure similar to the structure of the ARM repeats and is present at the very N-termini of proteins. It is a right-handed superhelix of eight alpha helices. The VHS domain has been found in a number of proteins, some of which have been implicated in intracellular trafficking and sorting. The VHS domain of the Tom1 protein is essential for the negative regulation of Interleukin-1 and Tumor Necrosis Factor-induced signaling pathways.
Probab=78.20 E-value=36 Score=28.49 Aligned_cols=96 Identities=14% Similarity=0.134 Sum_probs=60.8
Q ss_pred hhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHHHHhChHHhh----hchhHH-
Q psy14014 437 AEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLV-DHVYAIREAATLNLKKLVEQFGSEWAQ----STVIPK- 510 (615)
Q Consensus 437 ~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~-d~~~~vR~~a~~~l~~l~~~~~~~~~~----~~i~~~- 510 (615)
+..++|..-..+++.+.. +..|+. ..+..+.+.+. +++..+...|+..+..+++++|..+.. ..++..
T Consensus 14 l~~~dw~~ileicD~In~--~~~~~k----~a~ralkkRl~~~~n~~v~l~aL~LLe~~vkNCG~~fh~eiask~Fl~e~ 87 (141)
T cd03565 14 LQSEDWGLNMEICDIINE--TEDGPK----DAVRALKKRLNGNKNHKEVMLTLTVLETCVKNCGHRFHVLVAKKDFIKDV 87 (141)
T ss_pred CCCcCHHHHHHHHHHHhC--CCCcHH----HHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHhhhHH
Confidence 345677655555554432 222332 34445555565 467888888999999999999986532 456765
Q ss_pred HHhhhcC---CCchHHHHHHHHHHHHHhhhC
Q psy14014 511 VVAMSRD---QNYLHRMTCLFCINVLAEACG 538 (615)
Q Consensus 511 l~~~~~d---~~~~~R~~a~~~l~~l~~~~~ 538 (615)
|.+++.. ....||...+..+...+..+.
T Consensus 88 L~~~i~~~~~~~~~Vk~kil~li~~W~~~f~ 118 (141)
T cd03565 88 LVKLINPKNNPPTIVQEKVLALIQAWADAFR 118 (141)
T ss_pred HHHHHcccCCCcHHHHHHHHHHHHHHHHHhC
Confidence 7776653 234678777777777776554
No 304
>KOG3678|consensus
Probab=77.69 E-value=82 Score=31.69 Aligned_cols=152 Identities=10% Similarity=0.081 Sum_probs=86.6
Q ss_pred hhhHHHHHHhhccCc--hhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCC-CChHHHHHHHHHHHHHHHHhCcc--
Q psy14014 205 TDIIPMFVNLAQDEQ--DSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGD-TSWRVRYMVADKFTDLQKAVGPE-- 279 (615)
Q Consensus 205 ~~ll~~l~~~~~d~~--~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d-~~~~vR~~~~~~l~~l~~~~~~~-- 279 (615)
..-+..++.++..++ ..||..|...+.++...-..+.+...-+..+..+.+. .-....+..+..++.+..+...-
T Consensus 179 ~~~lD~Llrmf~aPn~et~vRve~~rlLEq~~~aeN~d~va~~~~~~Il~lAK~~e~~e~aR~~~~il~~mFKHSeet~~ 258 (832)
T KOG3678|consen 179 DGGLDLLLRMFQAPNLETSVRVEAARLLEQILVAENRDRVARIGLGVILNLAKEREPVELARSVAGILEHMFKHSEETCQ 258 (832)
T ss_pred cchHHHHHHHHhCCchhHHHHHHHHHHHHHHHhhhhhhHHhhccchhhhhhhhhcCcHHHHHHHHHHHHHHhhhhHHHHH
Confidence 345556666666554 4578888888877654433333332223333333332 23345555666666665442211
Q ss_pred -chhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhch
Q psy14014 280 -ITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSP 356 (615)
Q Consensus 280 -~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~ 356 (615)
......+..++..++-.+|.+-..++-+|+.++-+-+...+...+...+-..|..+....+.-.|-.+|-+...++.
T Consensus 259 ~Lvaa~~lD~vl~~~rRt~P~lLRH~ALAL~N~~L~~~~a~qrrmveKr~~EWLF~LA~skDel~R~~AClAV~vlat 336 (832)
T KOG3678|consen 259 RLVAAGGLDAVLYWCRRTDPALLRHCALALGNCALHGGQAVQRRMVEKRAAEWLFPLAFSKDELLRLHACLAVAVLAT 336 (832)
T ss_pred HHHhhcccchheeecccCCHHHHHHHHHHhhhhhhhchhHHHHHHHHhhhhhhhhhhhcchHHHHHHHHHHHHhhhhh
Confidence 11123344455566777788888888899988876554433333444455556666666777778888777776654
No 305
>smart00185 ARM Armadillo/beta-catenin-like repeats. Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.
Probab=76.88 E-value=5.6 Score=24.41 Aligned_cols=28 Identities=25% Similarity=0.301 Sum_probs=19.3
Q ss_pred hHHHHHHhhCCCCHHHHHHHHHHHHhhc
Q psy14014 328 ILPYVKDLVADPNQHVKSALASVIMGLS 355 (615)
Q Consensus 328 l~p~l~~~~~d~~~~vR~~~~~~l~~l~ 355 (615)
.+|.+.+++++.++.++..++++|.+++
T Consensus 13 ~i~~L~~ll~~~~~~i~~~a~~aL~nl~ 40 (41)
T smart00185 13 GLPALVELLKSEDEEVVKEAAWALSNLS 40 (41)
T ss_pred CHHHHHHHHcCCCHHHHHHHHHHHHHHc
Confidence 5666666666667777777777776654
No 306
>cd03572 ENTH_epsin_related ENTH domain, Epsin Related family; composed of hypothetical proteins containing an ENTH-like domain. The epsin N-terminal homology (ENTH) domain is an evolutionarily conserved protein module found primarily in proteins that participate in clathrin-mediated endocytosis. A set of proteins previously designated as harboring an ENTH domain in fact contains a highly similar, yet unique module referred to as an AP180 N-terminal homology (ANTH) domain. ENTH and ANTH (E/ANTH) domains are structurally similar to the VHS domain and are composed of a superhelix of eight alpha helices. E/ANTH domains bind both inositol phospholipids and proteins and contribute to the nucleation and formation of clathrin coats on membranes. ENTH domains also function in the development of membrane curvature through lipid remodeling during the formation of clathrin-coated vesicles. E/ANTH-bearing proteins have recently been shown to function with adaptor protein-1 and GGA adaptors at the t
Probab=76.03 E-value=33 Score=27.76 Aligned_cols=35 Identities=17% Similarity=0.326 Sum_probs=28.2
Q ss_pred hhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhcc
Q psy14014 282 KTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLD 316 (615)
Q Consensus 282 ~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~ 316 (615)
..+++..|.+-|++..+.|+..+++.|..++..-+
T Consensus 36 ~~ei~d~L~kRL~~~~~hVK~K~Lrilk~l~~~G~ 70 (122)
T cd03572 36 CQELLEYLLKRLKRSSPHVKLKVLKIIKHLCEKGN 70 (122)
T ss_pred HHHHHHHHHHHhcCCCCcchHHHHHHHHHHHhhCC
Confidence 34788888888888888898888888888887543
No 307
>smart00802 UME Domain in UVSB PI-3 kinase, MEI-41 and ESR-1. Characteristic domain in UVSP PI-3 kinase, MEI-41 and ESR-1. Found in nucleolar proteins. Associated with FAT, FATC, PI3_PI4_kinase modules.
Probab=75.68 E-value=37 Score=26.73 Aligned_cols=63 Identities=14% Similarity=0.166 Sum_probs=44.7
Q ss_pred ChHHHHHHHHhHHHHHHHhchh--hhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHH
Q psy14014 180 TPMVRRAAAGKLGELAKVVEVD--YLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQ 244 (615)
Q Consensus 180 ~~~vR~~a~~~l~~l~~~~~~~--~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~ 244 (615)
+..-|+.+..+++.+.+..++. ...+.+.-.+...+. .++.|..|+.+|..+...++++...+
T Consensus 28 ~~~ek~~~i~ai~~lI~~~g~~i~~a~pQI~acL~saL~--~~eL~~~al~~W~~~i~~L~~~~l~~ 92 (107)
T smart00802 28 PYNEKKRALRSIGFLIKLMGKHISSALPQIMACLQSALE--IPELRSLALRCWHVLIKTLKEEELGP 92 (107)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--chhHHHHHHHHHHHHHHhCCHHHHHH
Confidence 4466889999999999866642 123344444555443 56799999999999999998866443
No 308
>KOG2199|consensus
Probab=75.20 E-value=27 Score=34.08 Aligned_cols=100 Identities=14% Similarity=0.158 Sum_probs=71.3
Q ss_pred CCCChHHHHHHHHHHHHHHHHhCccc-hhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHHHH
Q psy14014 255 GDTSWRVRYMVADKFTDLQKAVGPEI-TKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVK 333 (615)
Q Consensus 255 ~d~~~~vR~~~~~~l~~l~~~~~~~~-~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~ 333 (615)
...+|.+-..++..++. .. .....+..+.+.+.+.++.|...|+..++.+..++++..+.+.....+..-+.
T Consensus 22 T~enW~~IlDvCD~v~~-------~~~~~kd~lk~i~KRln~~dphV~L~AlTLlda~~~NCg~~~r~EVsSr~F~~el~ 94 (462)
T KOG2199|consen 22 TSENWSLILDVCDKVGS-------DPDGGKDCLKAIMKRLNHKDPHVVLQALTLLDACVANCGKRFRLEVSSRDFTTELR 94 (462)
T ss_pred ccccHHHHHHHHHhhcC-------CCcccHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHhcchHHHHHHhhhhHHHHHH
Confidence 44567654444433322 21 12467888999999999999999999999999999988776666666777777
Q ss_pred HhhC-CCCHHHHHHHHHHHHhhchhhcch
Q psy14014 334 DLVA-DPNQHVKSALASVIMGLSPILGKH 361 (615)
Q Consensus 334 ~~~~-d~~~~vR~~~~~~l~~l~~~~g~~ 361 (615)
.++. ...++|+......+...++.+..+
T Consensus 95 al~~~~~h~kV~~k~~~lv~eWsee~K~D 123 (462)
T KOG2199|consen 95 ALIESKAHPKVCEKMRDLVKEWSEEFKKD 123 (462)
T ss_pred HHHhhcccHHHHHHHHHHHHHHHHHhccC
Confidence 7777 567888877766666666655443
No 309
>COG5369 Uncharacterized conserved protein [Function unknown]
Probab=74.94 E-value=38 Score=34.72 Aligned_cols=145 Identities=9% Similarity=0.081 Sum_probs=83.9
Q ss_pred HHHHHHHHhCCCChHHHHHHHHhHHHHHHH---hchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHH-
Q psy14014 168 LRSHFRNLCQDDTPMVRRAAAGKLGELAKV---VEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVE- 243 (615)
Q Consensus 168 l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~---~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~- 243 (615)
+.+.+++++.+++-.+..-+...+..+.-- ++.......++..+..++...++..|+.....+..+.-...++...
T Consensus 432 I~elLi~~Ls~Peimi~~~~t~~icn~vv~fsnL~~~fL~~~iIdvl~~~v~sKDdaLqans~wvlrHlmyncq~~ekf~ 511 (743)
T COG5369 432 IVELLIDALSNPEIMIEFPDTIDICNKVVPFSNLGAGFLEKSIIDVLVNLVMSKDDALQANSEWVLRHLMYNCQKNEKFK 511 (743)
T ss_pred hHHHHHHHhcCccceeeccchhhhhheeeeccchHHHHHHhhHHHHHHHHhhcchhhhhhcchhhhhhhhhcCcchhhhh
Confidence 455667777776555544333333222211 1223345678888888888777788877777777665555443211
Q ss_pred ---HhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCc-cch--------hh-hHHHHHHHhhcCCcHHHHHHHHHHHHH
Q psy14014 244 ---QLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGP-EIT--------KT-DLVQAFQMLLKDSEAEVRAAAANKVRD 310 (615)
Q Consensus 244 ---~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~-~~~--------~~-~l~~~l~~~l~d~~~~vr~~a~~~l~~ 310 (615)
..-+..+.++.+||.|.|...+.+.+.++.-...+ +.. +. -+...+.+.++..+|---+..++.+..
T Consensus 512 ~Lakig~~kvl~~~NDpc~~vq~q~lQilrNftc~~~knEkskdv~~K~~p~~ylfk~l~~k~e~~np~~i~~~~yilv~ 591 (743)
T COG5369 512 FLAKIGVEKVLSYTNDPCFKVQHQVLQILRNFTCDTSKNEKSKDVFIKATPRRYLFKRLIDKYEENNPMEILEGCYILVR 591 (743)
T ss_pred hHHhcCHHHHHHHhcCcccccHHHHHHHHHhcccccccccccceeEEecChHHHHHHHHHHHHHhcCchhhhhhHHHHHH
Confidence 22355678889999999999999999887642222 111 11 244555555555554333333444444
Q ss_pred HH
Q psy14014 311 FC 312 (615)
Q Consensus 311 ~~ 312 (615)
.+
T Consensus 592 ~a 593 (743)
T COG5369 592 NA 593 (743)
T ss_pred HH
Confidence 33
No 310
>smart00185 ARM Armadillo/beta-catenin-like repeats. Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.
Probab=74.79 E-value=4.7 Score=24.80 Aligned_cols=28 Identities=18% Similarity=0.228 Sum_probs=17.7
Q ss_pred hHHHHHhhCCCCCchHHHHHHHHHHHHh
Q psy14014 546 LLPTVLNMAGDNVANVRFNVAKTLQKIG 573 (615)
Q Consensus 546 i~~~l~~~~~D~~~~vr~~a~~~l~~l~ 573 (615)
.+|.|.+++...+++++..++.+|.++.
T Consensus 13 ~i~~L~~ll~~~~~~i~~~a~~aL~nl~ 40 (41)
T smart00185 13 GLPALVELLKSEDEEVVKEAAWALSNLS 40 (41)
T ss_pred CHHHHHHHHcCCCHHHHHHHHHHHHHHc
Confidence 4555666666666666666666666653
No 311
>KOG2199|consensus
Probab=73.39 E-value=22 Score=34.62 Aligned_cols=72 Identities=11% Similarity=-0.040 Sum_probs=52.8
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhh----hchhHHHHhhhc-CCCchHHHHHHHHHHHHHhhhC
Q psy14014 467 KLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQ----STVIPKVVAMSR-DQNYLHRMTCLFCINVLAEACG 538 (615)
Q Consensus 467 ~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~----~~i~~~l~~~~~-d~~~~~R~~a~~~l~~l~~~~~ 538 (615)
..+..+++.+++.++.|-.-|+..++.++.+||..+.. ..+...|..++. ...+.++...-..+.+.++.+.
T Consensus 45 d~lk~i~KRln~~dphV~L~AlTLlda~~~NCg~~~r~EVsSr~F~~el~al~~~~~h~kV~~k~~~lv~eWsee~K 121 (462)
T KOG2199|consen 45 DCLKAIMKRLNHKDPHVVLQALTLLDACVANCGKRFRLEVSSRDFTTELRALIESKAHPKVCEKMRDLVKEWSEEFK 121 (462)
T ss_pred HHHHHHHHHhcCCCcchHHHHHHHHHHHHHhcchHHHHHHhhhhHHHHHHHHHhhcccHHHHHHHHHHHHHHHHHhc
Confidence 46777888999999999999999999999999976533 346677777777 4566666655555555555443
No 312
>PF03130 HEAT_PBS: PBS lyase HEAT-like repeat; InterPro: IPR004155 These proteins contain a short bi-helical repeat that is related to HEAT. Cyanobacteria and red algae harvest light energy using macromolecular complexes known as phycobilisomes (PBS), peripherally attached to the photosynthetic membrane. The major components of PBS are the phycobiliproteins. These heterodimeric proteins are covalently attached to phycobilins: open-chain tetrapyrrole chromophores, which function as the photosynthetic light-harvesting pigments. Phycobiliproteins differ in sequence and in the nature and number of attached phycobilins to each of their subunits. These proteins include the lyase enzymes that specifically attach particular phycobilins to apophycobiliprotein subunits. The most comprehensively studied of these is the CpcE/Flyase P31967 from SWISSPROT, P31968 from SWISSPROT, which attaches phycocyanobilin (PCB) to the alpha subunit of apophycocyanin []. Similarly, MpeU/V attaches phycoerythrobilin to phycoerythrin II, while CpeY/Z is thought to be involved in phycoerythrobilin (PEB) attachment to phycoerythrin (PE) I (PEs I and II differ in sequence and in the number of attached molecules of PEB: PE I has five, PE II has six) []. All the reactions of the above lyases involve an apoprotein cysteine SH addition to a terminal delta 3,3'-double bond. Such a reaction is not possible in the case of phycoviolobilin (PVB), the phycobilin of alpha-phycoerythrocyanin (alpha-PEC). It is thought that in this case, PCB, not PVB, is first added to apo-alpha-PEC, and is then isomerized to PVB. The addition reaction has been shown to occur in the presence of either of the components of alpha-PEC-PVB lyase PecE or PecF (or both). The isomerisation reaction occurs only when both PecE and PecF components are present, i.e. the PecE/F phycobiliprotein lyase is also a phycobilin isomerase []. Another member of this family is the NblB protein, whose similarity to the phycobiliprotein lyases was previously noted []. This constitutively expressed protein is not known to have any lyase activity. It is thought to be involved in the coordination of PBS degradation with environmental nutrient limitation. It has been suggested that the similarity of NblB to the phycobiliprotein lyases is due to the ability to bind tetrapyrrole phycobilins via the common repeated motif [].; PDB: 1TE4_A.
Probab=73.02 E-value=2.7 Score=23.42 Aligned_cols=26 Identities=19% Similarity=0.226 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhc
Q psy14014 261 VRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLK 294 (615)
Q Consensus 261 vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~ 294 (615)
||..++..||.+.. +..+|.|++.++
T Consensus 1 VR~~Aa~aLg~igd--------~~ai~~L~~~L~ 26 (27)
T PF03130_consen 1 VRRAAARALGQIGD--------PRAIPALIEALE 26 (27)
T ss_dssp HHHHHHHHHGGG-S--------HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCC--------HHHHHHHHHHhc
Confidence 56777777776653 355666665554
No 313
>COG2733 Predicted membrane protein [Function unknown]
Probab=71.75 E-value=1.1e+02 Score=30.25 Aligned_cols=98 Identities=12% Similarity=0.069 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHH
Q psy14014 165 KAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQ 244 (615)
Q Consensus 165 ~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~ 244 (615)
.......+-...+|++...|+..-..+-.+...+..++....=...+.+.+. +++.++.++-.++..+
T Consensus 235 ~~a~~~~~D~v~~~p~h~~rk~~~R~~~~~i~~L~~Dp~~~~r~e~iK~~~~-~~~~i~~~~~~~w~~~----------- 302 (415)
T COG2733 235 SDAVNSFLDEVRRDPDHKMRKDFDRFLFDLIDDLYHDPGMAARAEAIKSYLK-EDEAIATAAGDMWTSL----------- 302 (415)
T ss_pred HHHHHHHHHHHHhCcCccchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHH-----------
Confidence 3344444555566777778877666655555444332111111222222221 1233444444444332
Q ss_pred hHHHHHHHhcCCCChHHHHHHHHHHHHHHHHh
Q psy14014 245 LVMPTLRQCSGDTSWRVRYMVADKFTDLQKAV 276 (615)
Q Consensus 245 ~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~ 276 (615)
-..+.+-.++++..+|.-.+..+..+++.+
T Consensus 303 --~~~l~~D~e~~~s~l~~~l~~~~~~~Ge~l 332 (415)
T COG2733 303 --SEWLKEDYESEDSMLRKRLARAVQSVGEEL 332 (415)
T ss_pred --HHHHHhcccCchhHHHHHHHHHHHHHHHHH
Confidence 234445567788888888888877777654
No 314
>PF07539 DRIM: Down-regulated in metastasis; InterPro: IPR011430 These eukaryotic proteins include DRIM (Down-Regulated In Metastasis) (O75691 from SWISSPROT), which is differentially expressed in metastatic and non-metastatic human breast carcinoma cells []. It is believed to be involved in processing of non-coding RNA [].
Probab=71.54 E-value=35 Score=28.53 Aligned_cols=31 Identities=23% Similarity=0.301 Sum_probs=26.1
Q ss_pred hhHHHHHHHhhcCCcHHHHHHHHHHHHHHHh
Q psy14014 283 TDLVQAFQMLLKDSEAEVRAAAANKVRDFCQ 313 (615)
Q Consensus 283 ~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~ 313 (615)
+++-..+..++.+.+++|+..|+.++-.+-.
T Consensus 16 ~~l~~~~~~LL~~~d~~vQklAL~cll~~k~ 46 (141)
T PF07539_consen 16 DELYDALLRLLSSRDPEVQKLALDCLLTWKD 46 (141)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc
Confidence 4677788899999999999999999877543
No 315
>KOG2229|consensus
Probab=70.30 E-value=1.3e+02 Score=30.76 Aligned_cols=142 Identities=11% Similarity=0.084 Sum_probs=82.4
Q ss_pred ChhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChh
Q psy14014 161 TAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQS 240 (615)
Q Consensus 161 ~~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~ 240 (615)
..+...++..++..-+.--.++.|...+.+|..+-..- -....+++..|..++.-.+...|..+..-+......+...
T Consensus 14 ~a~FP~el~dLL~~~~~~lp~~Lr~~i~~~LiLLrNk~--~i~~~~LL~lff~l~~~~dk~lRkllythiv~~Ikn~n~~ 91 (616)
T KOG2229|consen 14 LANFPSELKDLLRTNHTVLPPELREKIVKALILLRNKN--LIVAEDLLELFFPLLRCGDKNLRKLLYTHIVTTIKNINKK 91 (616)
T ss_pred HHhhhHHHHHHHHhccccCCHHHHHHHHHHHHHHhccC--cCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHhh
Confidence 33445556666666566668999999999998875421 1234578888888887778888999888887776654432
Q ss_pred ----hHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccch-hhhHHHHHHHhhcCCcHHHHHHHHHH
Q psy14014 241 ----DVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEIT-KTDLVQAFQMLLKDSEAEVRAAAANK 307 (615)
Q Consensus 241 ----~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~-~~~l~~~l~~~l~d~~~~vr~~a~~~ 307 (615)
.....+...+...+.+++..- +..++..+...+..... ...-+.++...+-+..+.|..+++..
T Consensus 92 ~kn~klnkslq~~~fsml~~~d~~~---ak~a~~~~~eL~kr~iW~d~~tV~i~~~acf~~~~ki~vs~l~F 160 (616)
T KOG2229|consen 92 HKNDKLNKSLQAFMFSMLDQSDSTA---AKMALDTMIELYKRNIWNDSKTVNIITTACFSKVPKILVSGLRF 160 (616)
T ss_pred cccchHHHHHHHHHHHHHhCCCchh---HHHHHHHHHHHHHhcccccchhHHHHHHHHhccCcHHHHhhhHH
Confidence 223334555666777776542 22333333333333221 12333334444455555555544443
No 316
>COG5369 Uncharacterized conserved protein [Function unknown]
Probab=69.60 E-value=12 Score=38.09 Aligned_cols=107 Identities=17% Similarity=0.238 Sum_probs=79.3
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHh---ChHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhh--
Q psy14014 467 KLNALCMTWLVDHVYAIREAATLNLKKLVEQF---GSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTV-- 541 (615)
Q Consensus 467 ~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~---~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~-- 541 (615)
.+...+.+.|.++...+.-.+...++.+.-.+ |..+....++..+.++....+...|.+..+.+.++...+....
T Consensus 431 ~I~elLi~~Ls~Peimi~~~~t~~icn~vv~fsnL~~~fL~~~iIdvl~~~v~sKDdaLqans~wvlrHlmyncq~~ekf 510 (743)
T COG5369 431 PIVELLIDALSNPEIMIEFPDTIDICNKVVPFSNLGAGFLEKSIIDVLVNLVMSKDDALQANSEWVLRHLMYNCQKNEKF 510 (743)
T ss_pred chHHHHHHHhcCccceeeccchhhhhheeeeccchHHHHHHhhHHHHHHHHhhcchhhhhhcchhhhhhhhhcCcchhhh
Confidence 46677888898887777777777766665444 3445557799999998887788889999999999887776542
Q ss_pred --HHHhhHHHHHhhCCCCCchHHHHHHHHHHHHh
Q psy14014 542 --TANFLLPTVLNMAGDNVANVRFNVAKTLQKIG 573 (615)
Q Consensus 542 --~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~ 573 (615)
....-...+..+.+|++-.|.....+.|.++.
T Consensus 511 ~~Lakig~~kvl~~~NDpc~~vq~q~lQilrNft 544 (743)
T COG5369 511 KFLAKIGVEKVLSYTNDPCFKVQHQVLQILRNFT 544 (743)
T ss_pred hhHHhcCHHHHHHHhcCcccccHHHHHHHHHhcc
Confidence 12233556677788988888888888888774
No 317
>PF09324 DUF1981: Domain of unknown function (DUF1981); InterPro: IPR015403 This domain is functionally uncharacterised and found in various plant and yeast protein transport proteins. It is noramlly associated with and C-termianl to the SEC7 domain. The SEC7 domain was named after the first protein found to contain such a region []. It has been shown to be linked with guanine nucleotide exchange function [, ].
Probab=69.58 E-value=34 Score=25.71 Aligned_cols=65 Identities=14% Similarity=0.078 Sum_probs=36.2
Q ss_pred hhHHHHHhh-CCCCCchHHHHHHHHHHHHhHhhhhhh--HHhhHHHHHhhhcCCCCccHHHHHHHHHH
Q psy14014 545 FLLPTVLNM-AGDNVANVRFNVAKTLQKIGPILETNV--IQSQVKPALDKLNGDTDVDVKYFAQEAIS 609 (615)
Q Consensus 545 ~i~~~l~~~-~~D~~~~vr~~a~~~l~~l~~~~~~~~--~~~~~~~~l~~l~~d~d~~v~~~a~~a~~ 609 (615)
.++..+... .+.++.+||.....++.++....+... .=..+..++.....|.++++-..|.+.++
T Consensus 17 ~fL~Pf~~i~~~~~~~~vre~il~ci~qil~~~~~~i~SGW~~if~il~~aa~~~~e~lv~~af~~~~ 84 (86)
T PF09324_consen 17 DFLKPFEYIMSNNPSIDVRELILECILQILQSRGENIKSGWKVIFSILRAAAKDNDESLVRLAFQIVQ 84 (86)
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHhCCCccHHHHHHHHHh
Confidence 333334443 345566777777777777776544221 11234444444456667777777666654
No 318
>PF14222 MOR2-PAG1_N: Cell morphogenesis N-terminal
Probab=68.20 E-value=1.7e+02 Score=31.13 Aligned_cols=35 Identities=14% Similarity=0.127 Sum_probs=29.5
Q ss_pred hhHHhhHHHHHhhhcCCCCccHHHHHHHHHHHHhh
Q psy14014 579 NVIQSQVKPALDKLNGDTDVDVKYFAQEAISSIAD 613 (615)
Q Consensus 579 ~~~~~~~~~~l~~l~~d~d~~v~~~a~~a~~~~~~ 613 (615)
......+..++.+..-..|+.|++.|..|++.+++
T Consensus 466 ~i~~~~lielL~R~tvHvd~~I~~~A~~aLk~la~ 500 (552)
T PF14222_consen 466 SIPFKSLIELLCRGTVHVDPNIRESAAQALKRLAR 500 (552)
T ss_pred CCcHHHHHHHHhcccccCCHHHHHHHHHHHHHHHH
Confidence 34456778888888889999999999999999876
No 319
>cd07064 AlkD_like_1 A new structural DNA glycosylase containing HEAT-like repeats. This domain represents a new and uncharacterized structural superfamily of DNA glycosylases that form an alpha-alpha superhelix fold that are not belong to the identified five structural DNA glycosylase superfamilies (UDG, AAG/MNPG, MutM/Fpg and helix-hairpin-helix). DNA glycosylases removing alkylated base residues have been identified in all organisms investigated and may be universally present in nature. DNA glycosylases catalyze the first step in Base Excision Repair (BER) pathway by cleaving damaged DNA bases within double strand DNA to produce an abasic site. The resulting abasic site is further processed by AP endonuclease, phosphodiesterase, DNA polymerases, and DNA ligase functions to restore the DNA to an undamaged state. All glycosylase examined to date utilize a similar strategy for binding DNA and base flipping despite their structural diversity. The known structures for members of this fa
Probab=66.35 E-value=1e+02 Score=27.86 Aligned_cols=130 Identities=15% Similarity=0.101 Sum_probs=71.6
Q ss_pred HHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCc-hhHH-HHHHHHHHHHHhhcChhhHHHhHH
Q psy14014 170 SHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQ-DSVR-LLAVEACVSIASLLSQSDVEQLVM 247 (615)
Q Consensus 170 ~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~-~~vr-~~a~~~l~~l~~~~~~~~~~~~l~ 247 (615)
.+...+.+++-.+.|..++..+...-+....+ -++.+..++.+-+ +.+- ..|...++.+... .+...
T Consensus 49 ~l~~~Lw~~~~~E~r~~al~~l~~~~~~~~~~-----~~~~~~~~l~~~~~Wd~vD~~~~~i~g~~~~~------~~~~~ 117 (208)
T cd07064 49 ELVLELWQQPEREYQYVAIDLLRKYKKFLTPE-----DLPLLEELITTKSWWDTVDSLAKVVGGILLAD------YPEFE 117 (208)
T ss_pred HHHHHHHcchHHHHHHHHHHHHHHHHhcCCHH-----HHHHHHHHHcCCchHHHHHHHHHHHhHHHHhC------ChhHH
Confidence 33445566666677777777666544333221 2444444544432 3322 2233333333211 22235
Q ss_pred HHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhh
Q psy14014 248 PTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQN 314 (615)
Q Consensus 248 ~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~ 314 (615)
+.+.+...+++..+|++++-+....... ...+.+..+...++.|++.-|+.+.-.+|-++++.
T Consensus 118 ~~l~~W~~s~~~W~rR~ai~~~l~~~~~----~~~~~l~~~~~~~~~d~e~fI~KAiGW~LRe~~k~ 180 (208)
T cd07064 118 PVMDEWSTDENFWLRRTAILHQLKYKEK----TDTDLLFEIILANLGSKEFFIRKAIGWALREYSKT 180 (208)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHc----cCHHHHHHHHHHhCCChHHHHHHHHHHHHHHHhcc
Confidence 6677777777766666665443333322 22345666677788888888888888888877764
No 320
>PF14868 DUF4487: Domain of unknown function (DUF4487)
Probab=63.01 E-value=2.1e+02 Score=30.36 Aligned_cols=75 Identities=17% Similarity=0.224 Sum_probs=46.3
Q ss_pred hHHHHHHhhc-CCChhHHHHHHHhhhHhhhhhchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHH
Q psy14014 367 LLPLFLSQLK-DECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVR 445 (615)
Q Consensus 367 l~p~l~~~l~-d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr 445 (615)
++-.+...+. .+...++..+++.++.+++..-+...+... .|.+. ..+..++.|++|-++
T Consensus 480 v~~~l~~l~~~~pp~~~kl~~~~FLs~lg~~~i~~~~q~~~-----~~~Ls--------------~Lf~~LL~d~~Wll~ 540 (559)
T PF14868_consen 480 VLTELTSLFKSEPPDHVKLALLDFLSSLGKLFIPESDQNPV-----SPALS--------------ELFHMLLADRHWLLH 540 (559)
T ss_pred HHHHHHHHHhhCCCccchHHHHHHHHHhccccCCccccchh-----hhHHH--------------HHHHHHhcCCcHHHH
Confidence 3334444443 334457777777777776655333322221 33222 345567889999999
Q ss_pred HHHHHHhHHHHhhhC
Q psy14014 446 LAIIEYMPLLAGQLG 460 (615)
Q Consensus 446 ~~~~~~l~~l~~~~~ 460 (615)
+.++++++.++....
T Consensus 541 q~ALeAF~~FAe~T~ 555 (559)
T PF14868_consen 541 QHALEAFGQFAERTS 555 (559)
T ss_pred HHHHHHHHHHhccCC
Confidence 999999999987543
No 321
>COG5101 CRM1 Importin beta-related nuclear transport receptor [Nuclear structure / Intracellular trafficking and secretion]
Probab=62.30 E-value=2.2e+02 Score=30.27 Aligned_cols=62 Identities=15% Similarity=0.111 Sum_probs=36.2
Q ss_pred ccCchhHHHHHHHHHHHHHhhcCh-hhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhC
Q psy14014 216 QDEQDSVRLLAVEACVSIASLLSQ-SDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVG 277 (615)
Q Consensus 216 ~d~~~~vr~~a~~~l~~l~~~~~~-~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~ 277 (615)
+|....|....+...+..-+.+.. -.+...++..+.++.......|+..++..+-+++...+
T Consensus 540 KdnKAVvASnIMyvvGQYpRFLkahw~FLkTVv~KLFEFMhE~HEGvqDMACDtFiKIvqKC~ 602 (1053)
T COG5101 540 KDNKAVVASNIMYVVGQYPRFLKAHWSFLKTVVKKLFEFMHEDHEGVQDMACDTFIKIVQKCP 602 (1053)
T ss_pred CCcchhhecceeeeeccchHHHHHHHHHHHHHHHHHHHHHhhhhhhHHhhhHHHHHHHHHhCc
Confidence 344444444444444443333221 13344566666677777788888899888888877654
No 322
>KOG0929|consensus
Probab=62.17 E-value=3.4e+02 Score=32.49 Aligned_cols=224 Identities=13% Similarity=0.129 Sum_probs=121.3
Q ss_pred ccchhhhhhhcCCcH-HHHHHHHHHhccccCCCCCcchhhhchHHHhhhhcCchhHHHHHHHHHHHHHHhhcChhHHh--
Q psy14014 51 GELIPFLTETIYDED-EVLLALAEQLGTFTPNVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDLE-- 127 (615)
Q Consensus 51 ~~ll~~l~~~~~~~~-~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~-- 127 (615)
..+.|+-...-.+.. +||..+.+|...-++ .-|..++.++..-..++...+-..+.+.+..+.....+..+.
T Consensus 1036 ~fl~Pfe~im~~s~s~~Irelv~rC~~~nik-----SGWk~if~i~~~aA~~~~~~iv~~~fe~v~~i~~~~f~~~~~~~ 1110 (1514)
T KOG0929|consen 1036 DFLRPFEHIMKRSSSAEIRELVVRCISSNIK-----SGWKNIFKIFTTAASDSSKNIVELAFETVSKILQELFENVFPQE 1110 (1514)
T ss_pred hhcCcchHHhhccCcchhHHHHHhhhhhhhh-----hhhhHHHHHHHHhhccchhhHHHHhHHHHHHHHHHhhhhhchhh
Confidence 345555544444444 589889988883222 237888888888888888888888888887665554443332
Q ss_pred ----hhHHHHHHHhhcCC-CcchhhhHHhhhhhhccCCChh----------------hHHHHHHHH---HHHhCCCChHH
Q psy14014 128 ----AHFVPLVQRLASGD-WFTSRTSACGLFSVCYPRVTAG----------------VKAELRSHF---RNLCQDDTPMV 183 (615)
Q Consensus 128 ----~~~l~~l~~l~~~~-~~~~r~~a~~~l~~~~~~~~~~----------------~~~~l~~~l---~~l~~d~~~~v 183 (615)
...++.+.....+. ....-..+++.+...+..+.+. .....+|.+ ...+.+....|
T Consensus 1111 ~~sf~d~v~cl~~F~~~~~~~~~s~~aI~~lr~ca~k~~e~~~~~~~~~~~~~~~~~~~~~wfP~l~~ls~i~~~~~~~v 1190 (1514)
T KOG0929|consen 1111 MDSFKDCVKCLEEFTKNLGFPDDSLNAIRFLRLCALKLAEGVYNEKLKVGKDSEFDVWNSGWFPMLFQLSKIINDYRLEV 1190 (1514)
T ss_pred hHHHHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHhccccchhhcccccccccccceeeeehhHhhhhHHhhccHHHH
Confidence 12334444433322 1112222222222221111110 111233333 33345788999
Q ss_pred HHHHHHhHHHHHHHhch---hhhHhhhHHHHHHhh----ccC-----chhHHHHHHHHHHHHHhhcCh-----hhHHHhH
Q psy14014 184 RRAAAGKLGELAKVVEV---DYLKTDIIPMFVNLA----QDE-----QDSVRLLAVEACVSIASLLSQ-----SDVEQLV 246 (615)
Q Consensus 184 R~~a~~~l~~l~~~~~~---~~~~~~ll~~l~~~~----~d~-----~~~vr~~a~~~l~~l~~~~~~-----~~~~~~l 246 (615)
|+.+++.+-.+.+..+. +.+|..++.++.... .+. +++....+..++..++..+.. ....+.+
T Consensus 1191 r~~al~vlF~il~~~g~~F~~~~We~v~~~~fpIF~~~~~~~~~~~~~eW~~tT~~~Al~~~v~lf~~~~~~l~~lL~~~ 1270 (1514)
T KOG0929|consen 1191 RKRALEVLFDILKEHGDDFSKEFWEDVFRILFPIFDNVKLDEDESEKDEWLSTTCNHALQALVDLFTQFFKQLNNLLPKV 1270 (1514)
T ss_pred HHHHHHHHHHHHHhhhhhccHHHHHHHHHheeecccccCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888877665 334555444333322 222 235555666666555554432 1223334
Q ss_pred HHHHHHhcCCCChHHHHHHHHHHHHHHHHhCcc
Q psy14014 247 MPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPE 279 (615)
Q Consensus 247 ~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~ 279 (615)
+..+..++..++...-+....+|..+....|..
T Consensus 1271 ~~ll~~ci~~~n~~la~~g~~cl~~l~~~n~~~ 1303 (1514)
T KOG0929|consen 1271 LGLLVGCIKQDNQQLARIGTSCLLQLVSSNGEK 1303 (1514)
T ss_pred HHHHHHHhcCcchhhHHhHHHHHHHHHHhcccc
Confidence 444455566666666666677777776665544
No 323
>KOG3961|consensus
Probab=61.59 E-value=67 Score=28.65 Aligned_cols=72 Identities=14% Similarity=0.007 Sum_probs=40.7
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHh--hhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhh
Q psy14014 466 EKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWA--QSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEAC 537 (615)
Q Consensus 466 ~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~--~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~ 537 (615)
..++|.+++.+.+....-|-.|-.-+..+.-..|.+.. ...++..+...+...+..+-..+++++..+....
T Consensus 113 ~~yLp~F~dGL~e~~hpyrf~A~~Gi~DLLl~~g~kilpVLPqLI~plK~al~trd~ev~~~~Lkvlq~lv~~~ 186 (262)
T KOG3961|consen 113 CPYLPLFFDGLAETDHPYRFVARQGITDLLLAGGEKILPVLPQLILPLKAALVTRDDEVICRTLKVLQQLVVSV 186 (262)
T ss_pred hHHHHHHhhhhhhcCCCcchhhhhcHHHHHHhcccccccccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHhc
Confidence 34666666666666677777776666666665553311 1223333344555666666666666666665443
No 324
>cd03572 ENTH_epsin_related ENTH domain, Epsin Related family; composed of hypothetical proteins containing an ENTH-like domain. The epsin N-terminal homology (ENTH) domain is an evolutionarily conserved protein module found primarily in proteins that participate in clathrin-mediated endocytosis. A set of proteins previously designated as harboring an ENTH domain in fact contains a highly similar, yet unique module referred to as an AP180 N-terminal homology (ANTH) domain. ENTH and ANTH (E/ANTH) domains are structurally similar to the VHS domain and are composed of a superhelix of eight alpha helices. E/ANTH domains bind both inositol phospholipids and proteins and contribute to the nucleation and formation of clathrin coats on membranes. ENTH domains also function in the development of membrane curvature through lipid remodeling during the formation of clathrin-coated vesicles. E/ANTH-bearing proteins have recently been shown to function with adaptor protein-1 and GGA adaptors at the t
Probab=61.58 E-value=86 Score=25.40 Aligned_cols=66 Identities=14% Similarity=0.039 Sum_probs=41.4
Q ss_pred HHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhC
Q psy14014 432 SIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFG 499 (615)
Q Consensus 432 ~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~ 499 (615)
.+.+..++.+|..=....+-|..+... ... -...++.++.+-|+++...|+..++.+|..++..-+
T Consensus 5 ll~~ATsdd~~p~pgy~~~Eia~~t~~-s~~-~~~ei~d~L~kRL~~~~~hVK~K~Lrilk~l~~~G~ 70 (122)
T cd03572 5 LLSKATSDDDEPTPGYLYEEIAKLTRK-SVG-SCQELLEYLLKRLKRSSPHVKLKVLKIIKHLCEKGN 70 (122)
T ss_pred HHHHHhcCCCCCCchHHHHHHHHHHHc-CHH-HHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHhhCC
Confidence 444555555544433334434444332 111 234688888999999999999999999999887633
No 325
>KOG1087|consensus
Probab=61.44 E-value=1.4e+02 Score=30.85 Aligned_cols=103 Identities=12% Similarity=0.146 Sum_probs=71.8
Q ss_pred HhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHHHhhHHH
Q psy14014 252 QCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPY 331 (615)
Q Consensus 252 ~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~ 331 (615)
..+.+++|..=..++..+.. ......+.+-.+.+.+.+.++.|..-|+..|..+.++++........-..+++-
T Consensus 12 ~~l~~pDWa~NleIcD~IN~------~~~~~~eAvralkKRi~~k~s~vq~lALtlLE~cvkNCG~~fh~~Va~k~fL~e 85 (470)
T KOG1087|consen 12 ESLAEPDWALNLEICDLINS------TEGGPKEAVRALKKRLNSKNSKVQLLALTLLETCVKNCGYSFHLQVASKEFLNE 85 (470)
T ss_pred ccccCccHHHHHHHHHHHhc------CccCcHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 34667888765444433322 111234778888899999999999999999999999998776654555666666
Q ss_pred HHHhhCC--CCHHHHHHHHHHHHhhchhhcc
Q psy14014 332 VKDLVAD--PNQHVKSALASVIMGLSPILGK 360 (615)
Q Consensus 332 l~~~~~d--~~~~vR~~~~~~l~~l~~~~g~ 360 (615)
+.++... .+..||.-++..|..-.+.++.
T Consensus 86 mVk~~k~~~~~~~Vr~kiL~LI~~W~~af~~ 116 (470)
T KOG1087|consen 86 MVKRPKNKPRDLKVREKILELIDTWQQAFCG 116 (470)
T ss_pred HHhccccCCcchhHHHHHHHHHHHHHHHccC
Confidence 6666654 4678888888877766666655
No 326
>cd00197 VHS_ENTH_ANTH VHS, ENTH and ANTH domain superfamily; composed of proteins containing a VHS, ENTH or ANTH domain. The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal Transducing Adaptor Molecule). It is located at the N-termini of proteins involved in intracellular membrane trafficking. The epsin N-terminal homology (ENTH) domain is an evolutionarily conserved protein module found primarily in proteins that participate in clathrin-mediated endocytosis. A set of proteins previously designated as harboring an ENTH domain in fact contains a highly similar, yet unique module referred to as an AP180 N-terminal homology (ANTH) domain. VHS, ENTH and ANTH domains are structurally similar and are composed of a superhelix of eight alpha helices. ENTH adnd ANTH (E/ANTH) domains bind both inositol phospholipids and proteins and contribute to the nucleation and formation of clathrin coats on membra
Probab=60.09 E-value=86 Score=24.94 Aligned_cols=39 Identities=13% Similarity=0.107 Sum_probs=32.8
Q ss_pred hhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccch
Q psy14014 282 KTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQ 320 (615)
Q Consensus 282 ~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~ 320 (615)
...++..+.+.+.+.+|.+...|+..|..+.++.++...
T Consensus 35 ~~~~~~~l~kRl~~~~~~~~lkaL~lLe~lvkN~g~~f~ 73 (115)
T cd00197 35 PKEAVDAIKKRINNKNPHVVLKALTLLEYCVKNCGERFH 73 (115)
T ss_pred HHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHccHHHH
Confidence 356888888888999999999999999999998876644
No 327
>KOG2229|consensus
Probab=59.52 E-value=2.2e+02 Score=29.36 Aligned_cols=95 Identities=13% Similarity=0.185 Sum_probs=58.0
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccccchhHHHH
Q psy14014 246 VMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIM 325 (615)
Q Consensus 246 l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~ 325 (615)
+..+|..-..--.+..|..++.+|.-+-.. +-.....++..|..++.-.+...|.-+...+...+.++..........
T Consensus 21 l~dLL~~~~~~lp~~Lr~~i~~~LiLLrNk--~~i~~~~LL~lff~l~~~~dk~lRkllythiv~~Ikn~n~~~kn~kln 98 (616)
T KOG2229|consen 21 LKDLLRTNHTVLPPELREKIVKALILLRNK--NLIVAEDLLELFFPLLRCGDKNLRKLLYTHIVTTIKNINKKHKNDKLN 98 (616)
T ss_pred HHHHHHhccccCCHHHHHHHHHHHHHHhcc--CcCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHhhcccchHH
Confidence 444444333334567888888877665431 223356788888888888888889888888887777654433322222
Q ss_pred HhhHHHHHHhhCCCCHH
Q psy14014 326 TYILPYVKDLVADPNQH 342 (615)
Q Consensus 326 ~~l~p~l~~~~~d~~~~ 342 (615)
..+-..+..++.+++..
T Consensus 99 kslq~~~fsml~~~d~~ 115 (616)
T KOG2229|consen 99 KSLQAFMFSMLDQSDST 115 (616)
T ss_pred HHHHHHHHHHHhCCCch
Confidence 33334455566666653
No 328
>KOG4524|consensus
Probab=58.60 E-value=3.1e+02 Score=30.85 Aligned_cols=76 Identities=17% Similarity=0.152 Sum_probs=56.7
Q ss_pred HHHhhHHHHHHhhCCCCHHHHHHHHHHHHhhchhhcc--hhh---hhhhHHHHHHhhcCCChhHHHHHHHhhhHhhhhhc
Q psy14014 324 IMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGK--HNT---VDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIG 398 (615)
Q Consensus 324 ~~~~l~p~l~~~~~d~~~~vR~~~~~~l~~l~~~~g~--~~~---~~~l~p~l~~~l~d~~~~vr~~a~~~l~~l~~~~~ 398 (615)
+...++..-..++.+++-.+|-.++..+......+.. +.+ ..+..|.+.+.+.+.++-+...|++++..++...|
T Consensus 800 iv~kIl~r~~~~LS~e~l~irvkaLdvl~~gl~~La~~~n~LlPlvhq~W~~vie~~~~k~~L~v~~a~~~i~~m~~~sg 879 (1014)
T KOG4524|consen 800 IVLKILGRGIHLLSHESLRIRVKALDVLSLGLPLLATYHNLLLPLVHQTWPSVIECLLCKDPLIVQRAFSCIEQMGKYSG 879 (1014)
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHhccHHHhccchhHhHHHHhhhhHHHHHHhcCchHHHHHHHHHHHHHHHHhh
Confidence 3445555666788999999999999988766555432 212 33556778888888899999999999998888777
Q ss_pred h
Q psy14014 399 I 399 (615)
Q Consensus 399 ~ 399 (615)
+
T Consensus 880 D 880 (1014)
T KOG4524|consen 880 D 880 (1014)
T ss_pred h
Confidence 5
No 329
>PF12397 U3snoRNP10: U3 small nucleolar RNA-associated protein 10 ; InterPro: IPR022125 This domain family is found in eukaryotes, and is approximately 120 amino acids in length. The family is found in association with PF08146 from PFAM. This family is the protein associated with U3 snoRNA which is involved in the processing of pre-rRNA.
Probab=57.40 E-value=1e+02 Score=24.86 Aligned_cols=35 Identities=11% Similarity=0.165 Sum_probs=24.4
Q ss_pred HhhhHHHHHHhhc-cCchhHHHHHHHHHHHHHhhcC
Q psy14014 204 KTDIIPMFVNLAQ-DEQDSVRLLAVEACVSIASLLS 238 (615)
Q Consensus 204 ~~~ll~~l~~~~~-d~~~~vr~~a~~~l~~l~~~~~ 238 (615)
...++|.+...++ ....+.|.++...++.++...+
T Consensus 4 l~~lLP~l~~~L~~s~~~d~~~a~ymIl~~La~k~~ 39 (121)
T PF12397_consen 4 LPRLLPFLLKGLKSSSSPDLQAAAYMILSVLASKVP 39 (121)
T ss_pred HHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHhhcC
Confidence 4456777777776 5666777777777777776655
No 330
>PF04078 Rcd1: Cell differentiation family, Rcd1-like ; InterPro: IPR007216 Rcd1 (Required cell differentiation 1) -like proteins are found among a wide range of organisms []. Rcd1 was initially identified as an essential factor in nitrogen starvation-invoked differentiation in fission yeast. This results largely from a defect in nitrogen starvation-invoked induction of ste11+, a key transcriptional factor gene required for the onset of sexual development. It is one of the most conserved proteins in eukaryotes, and its mammalian homologue is expressed in a variety of differentiating tissues [, ]. The mammalian Rcd1 is a novel transcriptional cofactor and is critical for retinoic acid-induced differentiation of F9 mouse teratocarcinoma cells, at least in part, via forming complexes with retinoic acid receptor and activation transcription factor-2 (ATF-2) []. Two of the members in this family have been characterised as being involved in regulation of Ste11 regulated sex genes [, ].; PDB: 2FV2_B.
Probab=56.67 E-value=1.7e+02 Score=27.30 Aligned_cols=130 Identities=13% Similarity=0.115 Sum_probs=70.9
Q ss_pred chHHHHHHHHHHHHHHHHhChHHh----hhchhHHHHhhhcCCCchHHHHHHHHHHHHHhh-hChh-------hHH---H
Q psy14014 480 VYAIREAATLNLKKLVEQFGSEWA----QSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEA-CGPT-------VTA---N 544 (615)
Q Consensus 480 ~~~vR~~a~~~l~~l~~~~~~~~~----~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~-~~~~-------~~~---~ 544 (615)
...+|-+++..+|.+++.-..+.. ..+++|..+..++.++...|..|...+..+... .|-. .|. .
T Consensus 109 ~E~LRLtsLGVIgaLvK~d~~evi~fLl~tEiiplcLr~me~GselSKtvAtfIlqKIL~dd~GL~yiC~t~eRf~av~~ 188 (262)
T PF04078_consen 109 FEYLRLTSLGVIGALVKTDDPEVISFLLQTEIIPLCLRIMEFGSELSKTVATFILQKILLDDVGLNYICQTAERFFAVAM 188 (262)
T ss_dssp HHHHHHHHHHHHHHHHTT--HHHHHHHHCTTHHHHHHHHHHHS-HHHHHHHHHHHHHHHHSHHHHHHHTSSHHHHHHHHH
T ss_pred cchhhHhHHHHHHHHHcCCcHHHHHHHHhhchHHHHHHHHHhccHHHHHHHHHHHHHHHcchhHHHHHhcCHHHHHHHHH
Confidence 456888888888888875444321 245788877777777777777787777776532 1211 121 1
Q ss_pred hhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhhHHhhHHHHHhhh--------cCCCCccHHHHHHHHHHHHh
Q psy14014 545 FLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKL--------NGDTDVDVKYFAQEAISSIA 612 (615)
Q Consensus 545 ~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~l--------~~d~d~~v~~~a~~a~~~~~ 612 (615)
-+-..+..+.+++.+.+-..++++.-++...-.. .+.+..++... .-..|+.++.+-.+-+..+.
T Consensus 189 vL~~mV~~l~~~pS~RLLKhIIrCYlRLsdnpra---r~aL~~~LP~~Lrd~~f~~~l~~D~~~k~~l~qLl~nl~ 261 (262)
T PF04078_consen 189 VLNKMVEQLVKQPSPRLLKHIIRCYLRLSDNPRA---REALRQCLPDQLRDGTFSNILKDDPSTKRWLQQLLSNLN 261 (262)
T ss_dssp HHHHHHHHHHHS--HHHHHHHHHHHHHHTTSTTH---HHHHHHHS-GGGTSSTTTTGGCS-HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHccCCChhHHHHHHHHHHHHccCHHH---HHHHHHhCcHHHhcHHHHHHHhcCHHHHHHHHHHHHHhc
Confidence 2223334456777777777777777777643222 12222222111 12337777777776665543
No 331
>PF11841 DUF3361: Domain of unknown function (DUF3361)
Probab=56.10 E-value=1.3e+02 Score=25.72 Aligned_cols=93 Identities=9% Similarity=0.046 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHH--hChHHhhhchhHHHHhhhcCC--CchHHHHHHHHHHHHHhhhChhh---HHHhhHHHHHhhCCCC
Q psy14014 485 EAATLNLKKLVEQ--FGSEWAQSTVIPKVVAMSRDQ--NYLHRMTCLFCINVLAEACGPTV---TANFLLPTVLNMAGDN 557 (615)
Q Consensus 485 ~~a~~~l~~l~~~--~~~~~~~~~i~~~l~~~~~d~--~~~~R~~a~~~l~~l~~~~~~~~---~~~~i~~~l~~~~~D~ 557 (615)
..++.++..+-+. .+-+.....++..+....+.+ +..+-+.++..+..+....+.-+ ..+.-++.|...+.+.
T Consensus 35 a~~L~af~eLMeHg~vsWd~l~~~FI~Kia~~Vn~~~~d~~i~q~sLaILEs~Vl~S~~ly~~V~~evt~~~Li~hLq~~ 114 (160)
T PF11841_consen 35 AYALTAFVELMEHGIVSWDTLSDSFIKKIASYVNSSAMDASILQRSLAILESIVLNSPKLYQLVEQEVTLESLIRHLQVS 114 (160)
T ss_pred HHHHHHHHHHHhcCcCchhhccHHHHHHHHHHHccccccchHHHHHHHHHHHHHhCCHHHHHHHhccCCHHHHHHHHHcC
Confidence 3444444444442 122222234455555444332 45556666666666654322111 1234456666667777
Q ss_pred CchHHHHHHHHHHHHhHhhh
Q psy14014 558 VANVRFNVAKTLQKIGPILE 577 (615)
Q Consensus 558 ~~~vr~~a~~~l~~l~~~~~ 577 (615)
++.++.++...+..+....+
T Consensus 115 ~~~iq~naiaLinAL~~kA~ 134 (160)
T PF11841_consen 115 NQEIQTNAIALINALFLKAD 134 (160)
T ss_pred CHHHHHHHHHHHHHHHhcCC
Confidence 88888888877777765554
No 332
>PF14668 RICTOR_V: Rapamycin-insensitive companion of mTOR, domain 5
Probab=56.02 E-value=48 Score=23.95 Aligned_cols=53 Identities=15% Similarity=0.350 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHH-hChHHhh-hchhHHHHhhhc-CCCchHHHHHHHHHHHHHhh
Q psy14014 484 REAATLNLKKLVEQ-FGSEWAQ-STVIPKVVAMSR-DQNYLHRMTCLFCINVLAEA 536 (615)
Q Consensus 484 R~~a~~~l~~l~~~-~~~~~~~-~~i~~~l~~~~~-d~~~~~R~~a~~~l~~l~~~ 536 (615)
.++|+.+++.++.. .|..+.. ..+++.+.++.+ ++.+.+|-.+..+++-++..
T Consensus 4 lKaaLWaighIgss~~G~~lL~~~~iv~~iv~~a~~s~v~siRGT~fy~Lglis~T 59 (73)
T PF14668_consen 4 LKAALWAIGHIGSSPLGIQLLDESDIVEDIVKIAENSPVLSIRGTCFYVLGLISST 59 (73)
T ss_pred HHHHHHHHHhHhcChHHHHHHhhcCHHHHHHHHHHhCCccchHHHHHHHHHHHhCC
Confidence 35566666666543 2333332 246666666543 56777777777777777654
No 333
>COG4912 Predicted DNA alkylation repair enzyme [DNA replication, recombination, and repair]
Probab=55.50 E-value=1.3e+02 Score=27.07 Aligned_cols=100 Identities=14% Similarity=0.120 Sum_probs=58.8
Q ss_pred chhHHHHhhhcCCCchHHHHHH-HHHHHHHhhhChhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhhhhHHhh
Q psy14014 506 TVIPKVVAMSRDQNYLHRMTCL-FCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQ 584 (615)
Q Consensus 506 ~i~~~l~~~~~d~~~~~R~~a~-~~l~~l~~~~~~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~~~~~~~ 584 (615)
.+++....-.++.+...|..++ .++.. +........++++....+.|+..-|+.+.-.+|+++..+. ++.....
T Consensus 118 ~li~~~~a~~~~~~~w~rraaiv~~l~~----~k~~~~~~~if~i~E~~l~d~e~fV~KAigWaLrq~~k~~-~e~~~~a 192 (222)
T COG4912 118 DLIEEWAADAEEDNRWERRAAIVHQLVY----KKKTLDLLEIFEIIELLLGDKEFFVQKAIGWALRQIGKHS-NELWVRA 192 (222)
T ss_pred HHHHHHHhccccchHHHHHHHHHHHHHH----hcCccchhHHHHHHHHHccChHHHHHHHHHHHHHHHHhhc-hHHHHHH
Confidence 4555553334444555444333 33332 2333334468999999999999999999999999998732 2222222
Q ss_pred HHHHHhhhcCCCCccHHHHHHHHHHHH
Q psy14014 585 VKPALDKLNGDTDVDVKYFAQEAISSI 611 (615)
Q Consensus 585 ~~~~l~~l~~d~d~~v~~~a~~a~~~~ 611 (615)
+. .-++|..-++...+.+...++.-.
T Consensus 193 ~~-~~~~la~ls~r~a~~~~~~~~~~~ 218 (222)
T COG4912 193 FA-NAHDLAPLSDREARKNLKDALREK 218 (222)
T ss_pred HH-HHhhccccchhhHhhhcchhhHHH
Confidence 22 223355556666666666666543
No 334
>PF14668 RICTOR_V: Rapamycin-insensitive companion of mTOR, domain 5
Probab=53.62 E-value=50 Score=23.86 Aligned_cols=54 Identities=15% Similarity=0.190 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHhh-hChhhHH-HhhHHHHHhhC-CCCCchHHHHHHHHHHHHhHhh
Q psy14014 523 RMTCLFCINVLAEA-CGPTVTA-NFLLPTVLNMA-GDNVANVRFNVAKTLQKIGPIL 576 (615)
Q Consensus 523 R~~a~~~l~~l~~~-~~~~~~~-~~i~~~l~~~~-~D~~~~vr~~a~~~l~~l~~~~ 576 (615)
...++.|+|+++.. .|...+. ..+.+.+.++. +.++..+|-.+..+|+-+....
T Consensus 4 lKaaLWaighIgss~~G~~lL~~~~iv~~iv~~a~~s~v~siRGT~fy~Lglis~T~ 60 (73)
T PF14668_consen 4 LKAALWAIGHIGSSPLGIQLLDESDIVEDIVKIAENSPVLSIRGTCFYVLGLISSTE 60 (73)
T ss_pred HHHHHHHHHhHhcChHHHHHHhhcCHHHHHHHHHHhCCccchHHHHHHHHHHHhCCH
Confidence 45688999999865 4444444 35777777765 6889999999999999987643
No 335
>PF07539 DRIM: Down-regulated in metastasis; InterPro: IPR011430 These eukaryotic proteins include DRIM (Down-Regulated In Metastasis) (O75691 from SWISSPROT), which is differentially expressed in metastatic and non-metastatic human breast carcinoma cells []. It is believed to be involved in processing of non-coding RNA [].
Probab=52.94 E-value=95 Score=25.96 Aligned_cols=30 Identities=23% Similarity=0.197 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHhHHHH
Q psy14014 165 KAELRSHFRNLCQDDTPMVRRAAAGKLGEL 194 (615)
Q Consensus 165 ~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l 194 (615)
.+++...+..++.+++.+|++.|++++..+
T Consensus 15 ~~~l~~~~~~LL~~~d~~vQklAL~cll~~ 44 (141)
T PF07539_consen 15 SDELYDALLRLLSSRDPEVQKLALDCLLTW 44 (141)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 355667778888999999999999988876
No 336
>cd00197 VHS_ENTH_ANTH VHS, ENTH and ANTH domain superfamily; composed of proteins containing a VHS, ENTH or ANTH domain. The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal Transducing Adaptor Molecule). It is located at the N-termini of proteins involved in intracellular membrane trafficking. The epsin N-terminal homology (ENTH) domain is an evolutionarily conserved protein module found primarily in proteins that participate in clathrin-mediated endocytosis. A set of proteins previously designated as harboring an ENTH domain in fact contains a highly similar, yet unique module referred to as an AP180 N-terminal homology (ANTH) domain. VHS, ENTH and ANTH domains are structurally similar and are composed of a superhelix of eight alpha helices. ENTH adnd ANTH (E/ANTH) domains bind both inositol phospholipids and proteins and contribute to the nucleation and formation of clathrin coats on membra
Probab=52.63 E-value=1.2e+02 Score=24.18 Aligned_cols=37 Identities=11% Similarity=0.024 Sum_probs=30.6
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHH
Q psy14014 466 EKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEW 502 (615)
Q Consensus 466 ~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~ 502 (615)
..++..+.+.+.++++.+...|+..+..+++++|..+
T Consensus 36 ~~~~~~l~kRl~~~~~~~~lkaL~lLe~lvkN~g~~f 72 (115)
T cd00197 36 KEAVDAIKKRINNKNPHVVLKALTLLEYCVKNCGERF 72 (115)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHccHHH
Confidence 4567777888888899999999999999999888754
No 337
>PF12783 Sec7_N: Guanine nucleotide exchange factor in Golgi transport N-terminal
Probab=52.14 E-value=1.6e+02 Score=25.46 Aligned_cols=93 Identities=15% Similarity=0.234 Sum_probs=58.9
Q ss_pred hHHHHHHHHhHHHHhhhChHh------------HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHh--hhchh
Q psy14014 443 RVRLAIIEYMPLLAGQLGVEF------------FDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWA--QSTVI 508 (615)
Q Consensus 443 ~vr~~~~~~l~~l~~~~~~~~------------~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~--~~~i~ 508 (615)
+.|..+++.+..+.+..|..+ ..+.+.+.+.+.+..++..+=..++..+..+...++.... .+.++
T Consensus 37 ~~k~l~LeLl~~iL~~~~~~f~~~~~~~~l~~~lk~~l~~~Ll~~~~~~~~~i~~~slri~~~l~~~~~~~Lk~ele~~l 116 (168)
T PF12783_consen 37 RSKLLSLELLESILENHGSVFRSSEEHPSLINLLKDDLCPALLKNLSSSDFPIFSRSLRIFLTLLSRFRSHLKLELEVFL 116 (168)
T ss_pred HHHHHHHHHHHHHHHhCHHHHhCCcchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555666655555444322 2355667777766656688888899999998888765422 23455
Q ss_pred HHHHh-hhcCCC--chHHHHHHHHHHHHHh
Q psy14014 509 PKVVA-MSRDQN--YLHRMTCLFCINVLAE 535 (615)
Q Consensus 509 ~~l~~-~~~d~~--~~~R~~a~~~l~~l~~ 535 (615)
+.+.. .+..++ +..|..+++++..+..
T Consensus 117 ~~i~~~il~~~~~~~~~k~~~Le~l~~l~~ 146 (168)
T PF12783_consen 117 SHIILRILESDNSSLWQKELALEILRELCK 146 (168)
T ss_pred HHHHHHHHccCCCcHHHHHHHHHHHHHHHh
Confidence 65555 444333 4678888888888874
No 338
>COG5231 VMA13 Vacuolar H+-ATPase V1 sector, subunit H [Energy production and conversion]
Probab=52.12 E-value=26 Score=33.25 Aligned_cols=69 Identities=13% Similarity=0.069 Sum_probs=44.6
Q ss_pred chhHHHHhhhcCCCch-HHHHHHHHHHHHHhhhChhh-H--HHhhHHHHHhhCCCCCchHHHHHHHHHHHHhH
Q psy14014 506 TVIPKVVAMSRDQNYL-HRMTCLFCINVLAEACGPTV-T--ANFLLPTVLNMAGDNVANVRFNVAKTLQKIGP 574 (615)
Q Consensus 506 ~i~~~l~~~~~d~~~~-~R~~a~~~l~~l~~~~~~~~-~--~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~ 574 (615)
.++..|...++..+++ .-+.||.-++.+.+..++.. + .-.....+..+++.+|++||..|.+++..++.
T Consensus 356 ~i~k~L~~~lq~n~~nt~i~vAc~Di~~~Vr~~PE~~~vl~Kyg~k~~im~L~nh~d~~VkfeAl~a~q~~i~ 428 (432)
T COG5231 356 EIVKVLKKYLQSNNPNTWICVACSDIFQLVRASPEINAVLSKYGVKEIIMNLINHDDDDVKFEALQALQTCIS 428 (432)
T ss_pred HHHHHHHHHHhcCCCCceEeeeHhhHHHHHHhCchHHHHHHHhhhHHHHHHHhcCCCchhhHHHHHHHHHHHh
Confidence 4777777777777776 33456666777766665432 1 23456667777777777777777777766653
No 339
>KOG2038|consensus
Probab=51.68 E-value=3.6e+02 Score=29.52 Aligned_cols=73 Identities=14% Similarity=0.104 Sum_probs=55.5
Q ss_pred HHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHhhccc
Q psy14014 243 EQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDA 317 (615)
Q Consensus 243 ~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~ 317 (615)
....+..|..+..|+=..||..++.++..+...-+.+ -..++-.+.+-+.|++..+-..|.+.|..+...-|+
T Consensus 302 y~rfievLe~lS~D~L~~vk~raL~ti~~lL~~kPEq--E~~LL~~lVNKlGDpqnKiaskAsylL~~L~~~HPn 374 (988)
T KOG2038|consen 302 YFRFIEVLEELSKDPLEEVKKRALKTIYDLLTNKPEQ--ENNLLVLLVNKLGDPQNKIASKASYLLEGLLAKHPN 374 (988)
T ss_pred HHHHHHHHHHHccccHHHHHHHHHHHHHHHHhCCcHH--HHHHHHHHHHhcCCcchhhhhhHHHHHHHHHhhCCc
Confidence 4457778888899999999998888887766543322 246778888899999998888888888887765444
No 340
>KOG1837|consensus
Probab=50.70 E-value=5.1e+02 Score=31.04 Aligned_cols=70 Identities=16% Similarity=0.236 Sum_probs=51.2
Q ss_pred hHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhhH--HHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhh
Q psy14014 508 IPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVT--ANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILE 577 (615)
Q Consensus 508 ~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~--~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~ 577 (615)
...++.-..+.+++.|..|+..+..+....|+... .++..|.+..++.|.+..|-..+...+.++-..+|
T Consensus 1543 ~~k~l~~trss~~~~r~~ai~~~~~l~~~lge~~~~lL~q~iPfLaEL~ED~~~~Ve~~~q~li~q~e~~lG 1614 (1621)
T KOG1837|consen 1543 NQKILKKTRSSSRKARYLAIIQVKLLYTKLGENVIVLLPQSIPFLAELMEDEDDEVECLCQKLIRQLEEVLG 1614 (1621)
T ss_pred HHHHHHHhccccHHHHHHHHHHHHHHHHHhcchhHHhhhhhhHHHHHHHhhhHHHHHHHHHHHHHHHHHHhc
Confidence 33334445677788899999999888888887653 57889999999999888887766665555544444
No 341
>PF11935 DUF3453: Domain of unknown function (DUF3453); InterPro: IPR021850 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is typically between 239 to 261 amino acids in length. ; PDB: 3ODS_A 3ODR_A 3O2Q_A 3O2T_A 3O2S_A 3GS3_A.
Probab=50.35 E-value=2.1e+02 Score=26.49 Aligned_cols=145 Identities=15% Similarity=0.150 Sum_probs=75.2
Q ss_pred HhCCCChHHHHHHHHhHHHHHHHhch--------hhhHh---hhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHH
Q psy14014 175 LCQDDTPMVRRAAAGKLGELAKVVEV--------DYLKT---DIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVE 243 (615)
Q Consensus 175 l~~d~~~~vR~~a~~~l~~l~~~~~~--------~~~~~---~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~ 243 (615)
++.|+++.|.+.++.+.+.+...+-. +..|. .+-..+...+.++++.||..|++.+..+.-........
T Consensus 1 Ll~d~d~~v~K~~I~~~~~iy~~~~~~i~~~~~~~~~W~~~~~lK~~Il~~~~~~~~gvk~~~iKFle~vIl~qs~~~~~ 80 (239)
T PF11935_consen 1 LLNDEDPAVVKRAIQCSTSIYPLVFRWICVNPSDEQLWESMNELKDRILSLWDSENPGVKLAAIKFLERVILVQSPGSSD 80 (239)
T ss_dssp HCT-SSHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHGGGSSSHHHHHHHHHHHHHHHHHTS---TT
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHhcCCCCCC
Confidence 45788888888888887776654211 22333 34445566677788889999998888776554432110
Q ss_pred HhH---HH--HHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCc--HHHHHHHHHHHHHHHhhcc
Q psy14014 244 QLV---MP--TLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSE--AEVRAAAANKVRDFCQNLD 316 (615)
Q Consensus 244 ~~l---~~--~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~--~~vr~~a~~~l~~~~~~~~ 316 (615)
+.- -+ .=...+....+-++....+. ....++..++..+.++. +.+-.+.+.+|..+++.-+
T Consensus 81 ~~~~~~~~~d~SL~~vp~~Hp~l~~~~Le~------------Ea~~lL~~Ll~~l~~~~i~~~~~~a~insL~~Iak~RP 148 (239)
T PF11935_consen 81 SPPRRGSPNDFSLSSVPPNHPLLNPQQLEA------------EANGLLDRLLDVLQSPHISSPLLTAIINSLSNIAKQRP 148 (239)
T ss_dssp S---GGGTTS--GGGS-TT-SSS-HHHHHH------------HHHHHHHHHHHHHC-TT--HHHHHHHHHHHHHHHHHSG
T ss_pred CccccccccCCCHHHcCCCCCcCCHHHHHH------------HHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHhh
Confidence 000 00 00000000111111111110 12346666666666554 5666777888888777543
Q ss_pred ccchhHHHHHhhHHHHHHhhC
Q psy14014 317 AYNQENIIMTYILPYVKDLVA 337 (615)
Q Consensus 317 ~~~~~~~~~~~l~p~l~~~~~ 337 (615)
.+.+.++|.+..+-.
T Consensus 149 ------~~~~~Il~~ll~~~~ 163 (239)
T PF11935_consen 149 ------QFMSRILPALLSFNP 163 (239)
T ss_dssp ------GGHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHhcCc
Confidence 345667777766544
No 342
>PF11935 DUF3453: Domain of unknown function (DUF3453); InterPro: IPR021850 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is typically between 239 to 261 amino acids in length. ; PDB: 3ODS_A 3ODR_A 3O2Q_A 3O2T_A 3O2S_A 3GS3_A.
Probab=50.19 E-value=2.1e+02 Score=26.48 Aligned_cols=71 Identities=24% Similarity=0.215 Sum_probs=39.6
Q ss_pred hhcCCChhHHHHHHHhhhHhhhh----hchhHHHHHHHHHhhhhhhhhccccchhhhhhhhHHHHHhhhcCCchHHHHHH
Q psy14014 374 QLKDECPEVRLNIISNLDCVNEV----IGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAII 449 (615)
Q Consensus 374 ~l~d~~~~vr~~a~~~l~~l~~~----~~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~~~~~vr~~~~ 449 (615)
+++|+++.|...++.+.+.+... +....+.+.. ++.+-. +. ..+....++.++.+|..++
T Consensus 1 Ll~d~d~~v~K~~I~~~~~iy~~~~~~i~~~~~~~~~--W~~~~~-------------lK-~~Il~~~~~~~~gvk~~~i 64 (239)
T PF11935_consen 1 LLNDEDPAVVKRAIQCSTSIYPLVFRWICVNPSDEQL--WESMNE-------------LK-DRILSLWDSENPGVKLAAI 64 (239)
T ss_dssp HCT-SSHHHHHHHHHHHHHHHHHHHHHHS--HHHHHH--HHHHHH-------------HH-HHHHHGGGSSSHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHcCCchHHHH--HHHHHH-------------HH-HHHHHHhcCCCchHHHHHH
Confidence 46788889999998887765432 1111111111 011110 11 3455556677888888888
Q ss_pred HHhHHHHhhhC
Q psy14014 450 EYMPLLAGQLG 460 (615)
Q Consensus 450 ~~l~~l~~~~~ 460 (615)
..+..+.....
T Consensus 65 KFle~vIl~qs 75 (239)
T PF11935_consen 65 KFLERVILVQS 75 (239)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHhcC
Confidence 88888766543
No 343
>PF10304 DUF2411: Domain of unknown function (DUF2411); InterPro: IPR019414 This entry represents a 38 residue domain of unknown function that is found at the extreme C-terminal end of some HEAT repeats.
Probab=50.18 E-value=35 Score=20.66 Aligned_cols=20 Identities=30% Similarity=0.373 Sum_probs=17.0
Q ss_pred cCCCCccHHHHHHHHHHHHh
Q psy14014 593 NGDTDVDVKYFAQEAISSIA 612 (615)
Q Consensus 593 ~~d~d~~v~~~a~~a~~~~~ 612 (615)
.+|+|.-||..|..+++.+.
T Consensus 15 ~~D~D~lvr~hA~~~Le~Le 34 (36)
T PF10304_consen 15 STDNDDLVREHAQDALEELE 34 (36)
T ss_pred HhCCcHHHHHHHHHHHHHHh
Confidence 58999999999999988764
No 344
>KOG1851|consensus
Probab=50.00 E-value=5.3e+02 Score=31.00 Aligned_cols=104 Identities=15% Similarity=0.086 Sum_probs=61.6
Q ss_pred HHHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhc-CCcchHHHHHHHHHHHHHHHHhChHHhhhchhHH
Q psy14014 432 SIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWL-VDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPK 510 (615)
Q Consensus 432 ~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l-~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~ 510 (615)
.+...+.|..-.+|+.++.++..+.+.---.+..+..-+...... .......+..|+..++.++-.+.-. .+..+|.
T Consensus 1573 l~~s~l~D~~i~vre~Aa~~Lsgl~~~s~~~~~~~k~d~~~~~~~s~s~~~i~~HgavlgLgA~VlafPy~--vP~wip~ 1650 (1710)
T KOG1851|consen 1573 LLESLLNDDQIEVREEAAKCLSGLLQGSKFQFVSDKRDTTSNILQSKSKDEIKAHGAVLGLGAIVLAFPYV--VPLWIPK 1650 (1710)
T ss_pred HHHHHHcchHHHHHHHHHHHHHHHHhccccccchHhhhhhhhhhhhcchHHHHhhhhHHHHHHHHHhcccc--chhhhHH
Confidence 556677788788999999999888653211111111111111221 2335667788899999998776532 2335555
Q ss_pred HHhhh---cCCCchHHHHHHHHHHHHHhhh
Q psy14014 511 VVAMS---RDQNYLHRMTCLFCINVLAEAC 537 (615)
Q Consensus 511 l~~~~---~d~~~~~R~~a~~~l~~l~~~~ 537 (615)
.+..+ ......+++++-+++.+.-...
T Consensus 1651 ~L~~Ls~fa~e~~~i~~tvkktvseFrrth 1680 (1710)
T KOG1851|consen 1651 PLMNLSSFARESAAIKQTVKKTVSEFRRTH 1680 (1710)
T ss_pred HHHHHHhhcCCchHHHHHHHHHHHHHHHHh
Confidence 44432 2233667888888888876543
No 345
>COG4912 Predicted DNA alkylation repair enzyme [DNA replication, recombination, and repair]
Probab=49.63 E-value=1.2e+02 Score=27.47 Aligned_cols=69 Identities=14% Similarity=0.125 Sum_probs=47.8
Q ss_pred hHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Q psy14014 203 LKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQK 274 (615)
Q Consensus 203 ~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~ 274 (615)
.++.+++.+....++.+...|.+++....... .+......+++++...+.|....|+.+...+|..++.
T Consensus 115 ~~~~li~~~~a~~~~~~~w~rraaiv~~l~~~---k~~~~~~~if~i~E~~l~d~e~fV~KAigWaLrq~~k 183 (222)
T COG4912 115 LWPDLIEEWAADAEEDNRWERRAAIVHQLVYK---KKTLDLLEIFEIIELLLGDKEFFVQKAIGWALRQIGK 183 (222)
T ss_pred cCHHHHHHHHhccccchHHHHHHHHHHHHHHh---cCccchhHHHHHHHHHccChHHHHHHHHHHHHHHHHh
Confidence 35677777755555666666766655443333 3333344688888889999999999999988888876
No 346
>KOG1087|consensus
Probab=48.20 E-value=1.3e+02 Score=30.96 Aligned_cols=99 Identities=15% Similarity=0.166 Sum_probs=67.0
Q ss_pred HhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhh----hchhHH
Q psy14014 435 ELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQ----STVIPK 510 (615)
Q Consensus 435 ~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~----~~i~~~ 510 (615)
..+.+++|.+-..+|+.+..- ..|. ...+-.+.+.+++.+..+...|+..|..++++||..+.. +.+++.
T Consensus 12 ~~l~~pDWa~NleIcD~IN~~--~~~~----~eAvralkKRi~~k~s~vq~lALtlLE~cvkNCG~~fh~~Va~k~fL~e 85 (470)
T KOG1087|consen 12 ESLAEPDWALNLEICDLINST--EGGP----KEAVRALKKRLNSKNSKVQLLALTLLETCVKNCGYSFHLQVASKEFLNE 85 (470)
T ss_pred ccccCccHHHHHHHHHHHhcC--ccCc----HHHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 345677887655555543221 1111 245556778888888899999999999999999986532 457777
Q ss_pred HHhhhcC--CCchHHHHHHHHHHHHHhhhCh
Q psy14014 511 VVAMSRD--QNYLHRMTCLFCINVLAEACGP 539 (615)
Q Consensus 511 l~~~~~d--~~~~~R~~a~~~l~~l~~~~~~ 539 (615)
++...+. ....+|..++..|....+.++.
T Consensus 86 mVk~~k~~~~~~~Vr~kiL~LI~~W~~af~~ 116 (470)
T KOG1087|consen 86 MVKRPKNKPRDLKVREKILELIDTWQQAFCG 116 (470)
T ss_pred HHhccccCCcchhHHHHHHHHHHHHHHHccC
Confidence 7766554 3667888888877777766544
No 347
>PF08324 PUL: PUL domain; InterPro: IPR013535 The PUL (after PLAP, UFD3 and lub1) domain is a predicted predominantly alpha helical globular domain found in eukaryotes. It is found in association with either WD repeats (see PDOC00574 from PROSITEDOC) and the PFU domain (see PDOC51394 from PROSITEDOC) or PPPDE and thioredoxin (see PDOC00172 from PROSITEDOC) domains. The PUL domain is a protein-protein interaction domain [, ]. Some proteins known to contain a PUL domain are listed below: Saccharomyces cerevisiae DOA1 (UFD3, ZZZ4), involved in ubiquitin conjugation pathway. DOA1 participates in the regulation of the ubiquitin conjugation pathway involving CDC48 by hindering multiubiquitination of substrates at the CDC48 chaperone. Schizosaccharomyces pombe ubiquitin homeostasis protein lub1, acts as a negative regulator of vacuole-dependent ubiquitin degradation. Mammalian phospholipase A-2-activating protein (PLA2P, PLAA), the homologue of DOA1. PLA2P plays an important role in the regulation of specific inflammatory disease processes. ; PDB: 3EBB_A 3L3F_X 3GAE_B 3PST_A 3PSP_A.
Probab=47.58 E-value=2.5e+02 Score=26.47 Aligned_cols=99 Identities=17% Similarity=0.182 Sum_probs=65.0
Q ss_pred hcCCCchHHHHHHHHHHHHHhhhC-hhhHH---H-hhHHHHHhhCCCC---CchHHHHHHHHHHHHhHhhh----hhhHH
Q psy14014 515 SRDQNYLHRMTCLFCINVLAEACG-PTVTA---N-FLLPTVLNMAGDN---VANVRFNVAKTLQKIGPILE----TNVIQ 582 (615)
Q Consensus 515 ~~d~~~~~R~~a~~~l~~l~~~~~-~~~~~---~-~i~~~l~~~~~D~---~~~vr~~a~~~l~~l~~~~~----~~~~~ 582 (615)
..+.++..++.+++++.++...-. ...+. . .++..+....... +.++|..++..+-++.-... +....
T Consensus 119 ~~~~~~~~~ml~lR~l~NlF~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~kn~~~A~ATl~~Nlsv~~~~~~~~~~~~ 198 (268)
T PF08324_consen 119 SSSSPPANQMLALRLLANLFSHPPGRQLLLSHFDSSILELLSSLLSSLLDSNKNVRIALATLLLNLSVLLHKNRSDEEWQ 198 (268)
T ss_dssp TTTSSHHHHHHHHHHHHHHTTSCCCHHHHHCTHHTCHHHHCHCCCTTS-HHHHHHHHHHHHHHHHHHHHHHHCTS-CCHH
T ss_pred cCCCcHHHHHHHHHHHHHhhCCCccHHHHHhcccchHHHHHHHHhhccccccHHHHHHHHHHHHHHHHHHHhcCCChHHH
Confidence 334678889999999999876532 22222 2 4555555555554 88999999998888764432 12223
Q ss_pred hhHHHHHhh-hc-CCCCccHHHHHHHHHHHHhh
Q psy14014 583 SQVKPALDK-LN-GDTDVDVKYFAQEAISSIAD 613 (615)
Q Consensus 583 ~~~~~~l~~-l~-~d~d~~v~~~a~~a~~~~~~ 613 (615)
..+...+.. +. ...|+|+.+.+.-|+|++..
T Consensus 199 ~~ll~~i~~~~~~~~~d~Ea~~R~LvAlGtL~~ 231 (268)
T PF08324_consen 199 SELLSSIIEVLSREESDEEALYRLLVALGTLLS 231 (268)
T ss_dssp HHHHHHHHHHCHCCHTSHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhccccCCHHHHHHHHHHHHHHhc
Confidence 334444444 43 44799999999999999863
No 348
>PF14225 MOR2-PAG1_C: Cell morphogenesis C-terminal
Probab=47.04 E-value=2.5e+02 Score=26.43 Aligned_cols=106 Identities=16% Similarity=0.213 Sum_probs=48.3
Q ss_pred HHHHHHHHHHhhcChhHHhhhHHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHHHHHhCCCChHHHHHHH
Q psy14014 109 KAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQDDTPMVRRAAA 188 (615)
Q Consensus 109 ~a~~~l~~l~~~~~~~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~~l~~d~~~~vR~~a~ 188 (615)
..++.+..+++.-+...+.. .+..++.........-....+..+...+-+....+++..+..++....+.+|..+.
T Consensus 134 ~~A~~La~~a~~~~~~~La~----il~~ya~~~fr~~~dfl~~v~~~l~~~f~P~~~~~~l~~Ll~lL~n~~~w~~~~~L 209 (262)
T PF14225_consen 134 EIAEALAQVAEAQGLPNLAR----ILSSYAKGRFRDKDDFLSQVVSYLREAFFPDHEFQILTFLLGLLENGPPWLRRKTL 209 (262)
T ss_pred HHHHHHHHHHHhCCCccHHH----HHHHHHhcCCCCHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHhCCcHHHHHHHH
Confidence 44466666665444333322 22233333321111222233333433333344444555556666666666666666
Q ss_pred HhHHHHHHHhch-hhhHhhhHHHHHHhhccC
Q psy14014 189 GKLGELAKVVEV-DYLKTDIIPMFVNLAQDE 218 (615)
Q Consensus 189 ~~l~~l~~~~~~-~~~~~~ll~~l~~~~~d~ 218 (615)
+.+..+.....- .....+++..+.++++.+
T Consensus 210 ~iL~~ll~~~d~~~~~~~dlispllrlL~t~ 240 (262)
T PF14225_consen 210 QILKVLLPHVDMRSPHGADLISPLLRLLQTD 240 (262)
T ss_pred HHHHHHhccccCCCCcchHHHHHHHHHhCCc
Confidence 666666554432 113344454455555433
No 349
>PF12333 Ipi1_N: Rix1 complex component involved in 60S ribosome maturation; InterPro: IPR024679 This domain is found in IPI1, which is a component of the Rix1 complex involved in pre-rRNA-processing [, ]. It is also found in testis-expressed sequence 10 protein, a nuclear membrane protein, which is a component of the MLL1/MLL complex [].
Probab=44.75 E-value=97 Score=24.14 Aligned_cols=51 Identities=18% Similarity=0.100 Sum_probs=37.6
Q ss_pred HHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchh---hhHhhhHHHHHHhhccC
Q psy14014 168 LRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVD---YLKTDIIPMFVNLAQDE 218 (615)
Q Consensus 168 l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~---~~~~~ll~~l~~~~~d~ 218 (615)
++.++...+.+-.++||..+...|.-+.+.++.+ ..+.++++.+..++.-.
T Consensus 12 l~~~i~sAMTHi~~~Ir~dsl~~L~~lL~~~p~~~~~~~~~kil~~f~~ll~~~ 65 (102)
T PF12333_consen 12 LMLYISSAMTHISPDIREDSLKFLDLLLEHAPDELCSGGWVKILPNFLDLLGWS 65 (102)
T ss_pred HHHHHHHHHHhCCHHHHHhHHHHHHHHHHHCChHhHhhhHHHHHHHHHHHHCCC
Confidence 4445566778889999999999999998888775 24556777777766533
No 350
>KOG3961|consensus
Probab=44.33 E-value=1e+02 Score=27.62 Aligned_cols=86 Identities=16% Similarity=0.189 Sum_probs=51.3
Q ss_pred hhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChh--hHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhh
Q psy14014 206 DIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQS--DVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKT 283 (615)
Q Consensus 206 ~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~--~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~ 283 (615)
..+|.|..-+.+.+...|-.|.+.+..+....+++ ...+.++..+...+...+.+|...+.+.+..+....+- ...
T Consensus 114 ~yLp~F~dGL~e~~hpyrf~A~~Gi~DLLl~~g~kilpVLPqLI~plK~al~trd~ev~~~~Lkvlq~lv~~~~~--vG~ 191 (262)
T KOG3961|consen 114 PYLPLFFDGLAETDHPYRFVARQGITDLLLAGGEKILPVLPQLILPLKAALVTRDDEVICRTLKVLQQLVVSVGC--VGA 191 (262)
T ss_pred HHHHHHhhhhhhcCCCcchhhhhcHHHHHHhcccccccccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHhccc--cch
Confidence 46666666666666666666666666665555533 22445666667777777777777777777766554331 123
Q ss_pred hHHHHHHHhh
Q psy14014 284 DLVQAFQMLL 293 (615)
Q Consensus 284 ~l~~~l~~~l 293 (615)
.++|.+.+++
T Consensus 192 aLVPfYRQlL 201 (262)
T KOG3961|consen 192 ALVPFYRQLL 201 (262)
T ss_pred hhhhHHHHhh
Confidence 4555555443
No 351
>PF12612 TFCD_C: Tubulin folding cofactor D C terminal; InterPro: IPR022577 This region is found in eukaryotes, and is typically between 182 and 199 amino acids in length. There is a single completely conserved residue R that may be functionally important. Tubulin folding cofactor D does not co-polymerise with microtubules either in vivo or in vitro, but instead modulates microtubule dynamics by sequestering beta-tubulin from GTP-bound alphabeta-heterodimers in microtubules [].
Probab=44.31 E-value=1.9e+02 Score=25.69 Aligned_cols=31 Identities=16% Similarity=0.131 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHhHHHHH
Q psy14014 165 KAELRSHFRNLCQDDTPMVRRAAAGKLGELA 195 (615)
Q Consensus 165 ~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~ 195 (615)
...++..+.+...+.-.+||..|..++..+.
T Consensus 5 ~~~~~~~llrqa~EKiDrvR~~A~~~l~~ll 35 (193)
T PF12612_consen 5 VQQIIGGLLRQAAEKIDRVREVAGKCLQRLL 35 (193)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445555566666777789999999988887
No 352
>PF11841 DUF3361: Domain of unknown function (DUF3361)
Probab=43.69 E-value=2.1e+02 Score=24.50 Aligned_cols=97 Identities=8% Similarity=0.052 Sum_probs=62.0
Q ss_pred HHHHHHHHhHHHHhh--hChHhHHHHHHHHHHHhcCCc--chHHHHHHHHHHHHHHHHhCh--HHhh-hchhHHHHhhhc
Q psy14014 444 VRLAIIEYMPLLAGQ--LGVEFFDEKLNALCMTWLVDH--VYAIREAATLNLKKLVEQFGS--EWAQ-STVIPKVVAMSR 516 (615)
Q Consensus 444 vr~~~~~~l~~l~~~--~~~~~~~~~l~~~l~~~l~d~--~~~vR~~a~~~l~~l~~~~~~--~~~~-~~i~~~l~~~~~ 516 (615)
.-..++.++..+.+. .+.+...+.++..+....+.+ +..+-..|+..+..++..... .... +--++.|...++
T Consensus 33 ~La~~L~af~eLMeHg~vsWd~l~~~FI~Kia~~Vn~~~~d~~i~q~sLaILEs~Vl~S~~ly~~V~~evt~~~Li~hLq 112 (160)
T PF11841_consen 33 ILAYALTAFVELMEHGIVSWDTLSDSFIKKIASYVNSSAMDASILQRSLAILESIVLNSPKLYQLVEQEVTLESLIRHLQ 112 (160)
T ss_pred HHHHHHHHHHHHHhcCcCchhhccHHHHHHHHHHHccccccchHHHHHHHHHHHHHhCCHHHHHHHhccCCHHHHHHHHH
Confidence 333445555555542 244555566666666665533 467888899988888764221 0111 224678888888
Q ss_pred CCCchHHHHHHHHHHHHHhhhChh
Q psy14014 517 DQNYLHRMTCLFCINVLAEACGPT 540 (615)
Q Consensus 517 d~~~~~R~~a~~~l~~l~~~~~~~ 540 (615)
+.++.++.+++.-+..+....+++
T Consensus 113 ~~~~~iq~naiaLinAL~~kA~~~ 136 (160)
T PF11841_consen 113 VSNQEIQTNAIALINALFLKADDS 136 (160)
T ss_pred cCCHHHHHHHHHHHHHHHhcCChH
Confidence 899999999999888887665543
No 353
>KOG1789|consensus
Probab=43.34 E-value=5.7e+02 Score=29.45 Aligned_cols=128 Identities=16% Similarity=0.170 Sum_probs=71.5
Q ss_pred HHHHHhHHHHHHHhc-------hhhhHhhhHHHHHHhhc-cCchhHHHHHHHHHHHHHhhcChh--hHHHhHHHHHHHhc
Q psy14014 185 RAAAGKLGELAKVVE-------VDYLKTDIIPMFVNLAQ-DEQDSVRLLAVEACVSIASLLSQS--DVEQLVMPTLRQCS 254 (615)
Q Consensus 185 ~~a~~~l~~l~~~~~-------~~~~~~~ll~~l~~~~~-d~~~~vr~~a~~~l~~l~~~~~~~--~~~~~l~~~l~~~~ 254 (615)
..++.++..+.+..+ .+...-..++.+..++. ...+.+...|++.+..+..+-+.- .....++-.+.+++
T Consensus 1743 ~m~LtAL~Nli~~nPdlasvfgSe~~lig~F~l~~~~lr~~~~~~iq~LaL~Vi~~~Tan~~Cv~~~a~~~vL~~LL~lL 1822 (2235)
T KOG1789|consen 1743 LMTLTALANLVSANPDLASVFGSEILLIGNFPLLITYLRCRKHPKLQILALQVILLATANKECVTDLATCNVLTTLLTLL 1822 (2235)
T ss_pred HHHHHHHHHHHhhCcchhhhccchhhhhcccHHHHHHHHHcCCchHHHHHHHHHHHHhcccHHHHHHHhhhHHHHHHHHH
Confidence 344556666655443 22222234455544443 556778888888887665544321 11112333344443
Q ss_pred CCCChHHHHHHHHHHHHHHHH--hCccch-hhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHh
Q psy14014 255 GDTSWRVRYMVADKFTDLQKA--VGPEIT-KTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQ 313 (615)
Q Consensus 255 ~d~~~~vR~~~~~~l~~l~~~--~~~~~~-~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~ 313 (615)
+..+..|..+.+.+..++.. ++++.. ...++.++.-++....+++|.+++.-++.+..
T Consensus 1823 -HS~PS~R~~vL~vLYAL~S~~~i~keA~~hg~l~yil~~~c~~~~~QqRAqaAeLlaKl~A 1883 (2235)
T KOG1789|consen 1823 -HSQPSMRARVLDVLYALSSNGQIGKEALEHGGLMYILSILCLTNSDQQRAQAAELLAKLQA 1883 (2235)
T ss_pred -hcChHHHHHHHHHHHHHhcCcHHHHHHHhcCchhhhhHHHhccCcHHHHHHHHHHHHHhhh
Confidence 34566788888888777642 111111 11234444455677888999999999888754
No 354
>COG5110 RPN1 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]
Probab=42.35 E-value=4.2e+02 Score=27.68 Aligned_cols=298 Identities=17% Similarity=0.088 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCcchHHHHH-HHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcH-HHHHHHHHHhcc-
Q psy14014 1 MASSDSAPDDSLYPIAVLI-DELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDED-EVLLALAEQLGT- 77 (615)
Q Consensus 1 ~~~~~~~~~~~~~~i~~ll-~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~-~vr~~a~~~l~~- 77 (615)
.+-|+..+-+.-.|+..+| +.+++++...|.+|+-.|+..-..-..+....-|.|++.. .|.. ++--.+.-.||.
T Consensus 437 ig~s~~~v~~E~~palalLs~yl~s~s~k~~~aaiLGlg~afsGt~~eevl~lL~Pi~~s--td~pie~~~~asltLg~v 514 (881)
T COG5110 437 IGLSGLRVFEERPPALALLSNYLQSSSSKHVIAAILGLGAAFSGTQAEEVLELLQPIMFS--TDSPIEVVFFASLTLGSV 514 (881)
T ss_pred eeecccccccccchHHHHHHHhccCCchHHHHHHHhhhHHhhcCCcHHHHHHHhhhhhcC--CCCcHHHHHHHHHhhhhe
Q ss_pred ccCCCCCcchhhhchHHHhhhh-cCchhHHHHHHHHHHHHHHhhcCh-hHHhhhHHHHHHHhhcCCCcchhhhHHhhhhh
Q psy14014 78 FTPNVGGPEYVHCLLPPLESLA-TVEETVVRDKAVESLRLISAQHSP-HDLEAHFVPLVQRLASGDWFTSRTSACGLFSV 155 (615)
Q Consensus 78 l~~~~~~~~~~~~l~~~l~~l~-~~~~~~vr~~a~~~l~~l~~~~~~-~~~~~~~l~~l~~l~~~~~~~~r~~a~~~l~~ 155 (615)
|+..+.+.-....+-.+++.-. ..+.+.+|-.|+-.-.-+...-.. ++.+..++.+=..+. ....++-.
T Consensus 515 FvGtcngD~ts~ilqtf~Er~~~e~~tqw~RFlaLgLa~Lf~g~~d~~d~v~eti~aIeg~ls---------~~~eiLv~ 585 (881)
T COG5110 515 FVGTCNGDLTSLILQTFVERGKIESETQWFRFLALGLASLFYGRKDQVDDVEETIMAIEGALS---------KHEEILVK 585 (881)
T ss_pred EeeccCchHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHccccchhHHHHHHHHHhcchhh---------hhHHHHHh
Q ss_pred hccCCChhhHHHHHHHHH--HHhCCCChHHHHHHHHhHHHHHHHh---chhhhHhhhHHHHHHhhccCchhHHHHHHHHH
Q psy14014 156 CYPRVTAGVKAELRSHFR--NLCQDDTPMVRRAAAGKLGELAKVV---EVDYLKTDIIPMFVNLAQDEQDSVRLLAVEAC 230 (615)
Q Consensus 156 ~~~~~~~~~~~~l~~~l~--~l~~d~~~~vR~~a~~~l~~l~~~~---~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l 230 (615)
.|.+.+..-...+..++. .-....+..--.+.++.++.+.-.. |.+...+..+-.|-..+--.++.+|...--++
T Consensus 586 ~c~Y~GTGdvl~Iq~lLhv~~e~~~D~~k~~ea~ie~~a~Lg~AliamGedig~eMvlRhf~h~mhyg~~hiR~~~PLa~ 665 (881)
T COG5110 586 GCQYVGTGDVLVIQSLLHVKDEFTGDTLKNEEALIESLALLGCALIAMGEDIGSEMVLRHFSHSMHYGSSHIRSVLPLAY 665 (881)
T ss_pred hceecccCcHHHHHHHHhccCCCCcccchhhHHHHHHHHHhhhHHhhhcchhhHHHHHHHhhhHhhcCcHHHHHHHHHHH
Q ss_pred HHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhCccchhhhHHHHHHHhhcCCcHHHHHHHHHHHHH
Q psy14014 231 VSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRD 310 (615)
Q Consensus 231 ~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~ 310 (615)
+.+...-|.-. ++..+.+...|.+-.|-..++-++|-++....+.-...-+-......-++++.---...++.|-.
T Consensus 666 gils~SnPQm~----vfDtL~r~shd~dl~v~~ntIfamGLiGAGT~NaRlaqlLrQlaSYY~kes~aLfv~riAQGLl~ 741 (881)
T COG5110 666 GILSPSNPQMN----VFDTLERSSHDGDLNVIINTIFAMGLIGAGTLNARLAQLLRQLASYYYKESKALFVLRIAQGLLS 741 (881)
T ss_pred hcccCCCcchH----HHHHHHHhccccchhHHHHHHHHhhccccCcchHHHHHHHHHHHHHHhhccchhhHHHHHHHHHH
Q ss_pred HHh
Q psy14014 311 FCQ 313 (615)
Q Consensus 311 ~~~ 313 (615)
+.+
T Consensus 742 LGK 744 (881)
T COG5110 742 LGK 744 (881)
T ss_pred hcC
No 355
>KOG4346|consensus
Probab=40.82 E-value=5e+02 Score=28.08 Aligned_cols=105 Identities=12% Similarity=0.040 Sum_probs=55.4
Q ss_pred HHHhhhhcCchhHHHHHHHHHHHHHHhhcCh--hHHhhhHHHHHHHhhcC----CCcchhhhHHhhhhhhccCCChhhHH
Q psy14014 93 PPLESLATVEETVVRDKAVESLRLISAQHSP--HDLEAHFVPLVQRLASG----DWFTSRTSACGLFSVCYPRVTAGVKA 166 (615)
Q Consensus 93 ~~l~~l~~~~~~~vr~~a~~~l~~l~~~~~~--~~~~~~~l~~l~~l~~~----~~~~~r~~a~~~l~~~~~~~~~~~~~ 166 (615)
.+++.+...++.++-++|...+.++....+. .++...++..+..+-+. ...+.|..++..+.. .-.+..-+
T Consensus 512 Dl~emL~~~E~yE~~eaAL~nae~LI~r~pt~~rq~A~eLlq~lLhLqn~f~~~~F~etq~~aiVa~~v---T~p~pcap 588 (849)
T KOG4346|consen 512 DLFEMLLEKEKYEVFEAALFNAENLINRRPTGFRQIAEELLQRLLHLQNNFGTPKFKETQVDAIVAACV---TQPPPCAP 588 (849)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhcCccchhhhhHHHHHHHHh---cCCCcchh
Confidence 3445556677889999999999999997765 23334455555444332 112233333322211 11122223
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhch
Q psy14014 167 ELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEV 200 (615)
Q Consensus 167 ~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~ 200 (615)
.+...|...-+--+-+.|--..+++..-++.++.
T Consensus 589 ylcrqf~a~n~~YS~rQRiliL~vi~lAA~els~ 622 (849)
T KOG4346|consen 589 YLCRQFIAPNQGYSIRQRILILSVIHLAADELSA 622 (849)
T ss_pred HHHHHhhcCCCcccHHHHHHHHHHHHHHHHHhCc
Confidence 3333333222224566777777777777766544
No 356
>KOG4646|consensus
Probab=36.88 E-value=2.5e+02 Score=23.35 Aligned_cols=105 Identities=13% Similarity=0.047 Sum_probs=58.7
Q ss_pred hhHHHHhhhcCCCchHHHHHHHHHHHHHhhh-ChhhHH-HhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhh---hhhH
Q psy14014 507 VIPKVVAMSRDQNYLHRMTCLFCINVLAEAC-GPTVTA-NFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILE---TNVI 581 (615)
Q Consensus 507 i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~-~~~~~~-~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~---~~~~ 581 (615)
++..+.+.+..+|.....-++.++.+++..- ...++. ..-+|.+...++|+...+.-.++.++..+...-. +...
T Consensus 59 vLdlFvdsl~e~ne~LvefgIgglCNlC~d~~n~~~I~ea~g~plii~~lssp~e~tv~sa~~~l~~l~~~~Rt~r~ell 138 (173)
T KOG4646|consen 59 VLDLFVDSLEEQNELLVEFGIGGLCNLCLDKTNAKFIREALGLPLIIFVLSSPPEITVHSAALFLQLLEFGERTERDELL 138 (173)
T ss_pred HHHHHHHHhhcccHHHHHHhHHHHHhhccChHHHHHHHHhcCCceEEeecCCChHHHHHHHHHHHHHhcCcccchhHHhc
Confidence 5555566666666555554554444443111 111122 2235666667788888888878777777653221 2234
Q ss_pred HhhHHHHHhhhcCCCCccHHHHHHHHHHHH
Q psy14014 582 QSQVKPALDKLNGDTDVDVKYFAQEAISSI 611 (615)
Q Consensus 582 ~~~~~~~l~~l~~d~d~~v~~~a~~a~~~~ 611 (615)
.+.+..++.+.....--+-|..|..+++..
T Consensus 139 ~p~Vv~~v~r~~~s~s~~~rnLa~~fl~~~ 168 (173)
T KOG4646|consen 139 SPAVVRTVQRWRESKSHDERNLASAFLDKH 168 (173)
T ss_pred cHHHHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 455666666654445556677777776654
No 357
>PF14631 FancD2: Fanconi anaemia protein FancD2 nuclease; PDB: 3S4W_B.
Probab=36.82 E-value=7.6e+02 Score=30.05 Aligned_cols=148 Identities=13% Similarity=0.077 Sum_probs=0.0
Q ss_pred HHHHHHHhhcCCCcchhhhHHhhhhhhccCCChhhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhch--hhhHhhh
Q psy14014 130 FVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEV--DYLKTDI 207 (615)
Q Consensus 130 ~l~~l~~l~~~~~~~~r~~a~~~l~~~~~~~~~~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~--~~~~~~l 207 (615)
++.+...+..++...++..+..+...++..+....+++++..+...+.+.+..--..++..|..++...+. ..+-..+
T Consensus 436 iL~la~~Ll~S~e~~v~~FG~~~Y~~lF~~fds~~qqeVv~~Lvthi~sg~~~ev~~aL~vL~~L~~~~~~~l~~fa~~l 515 (1426)
T PF14631_consen 436 ILSLAQSLLRSKEPSVREFGSHLYKYLFKEFDSYCQQEVVGALVTHIGSGNSQEVDAALDVLCELAEKNPSELQPFATFL 515 (1426)
T ss_dssp HHHHHHHHHTSSSHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH-HHHHHHTHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Q ss_pred HHHHHHhhccCchhHHH-HHHHHHHHHHhhcChhhHHHhHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhC
Q psy14014 208 IPMFVNLAQDEQDSVRL-LAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVG 277 (615)
Q Consensus 208 l~~l~~~~~d~~~~vr~-~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vR~~~~~~l~~l~~~~~ 277 (615)
.+++..+-+=....+|+ .-+-+.-.+...-....+...+.-.+.+.+..++.+.++..+-....+...++
T Consensus 516 ~giLD~l~~Ls~~qiR~lf~il~~La~~~~~~~s~i~del~ivIRKQLss~~~~~K~~GIIGav~~i~~la 586 (1426)
T PF14631_consen 516 KGILDYLDNLSLQQIRKLFDILCTLAFSDSSSSSSIQDELHIVIRKQLSSSNPKYKRIGIIGAVMMIKHLA 586 (1426)
T ss_dssp HGGGGGGGG--HHHHHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHT-SSHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhcCCcccchhhHHHHHHHHHHhhcCCcHHHHHHhHHHHHHHHHHHH
No 358
>COG5234 CIN1 Beta-tubulin folding cofactor D [Posttranslational modification, protein turnover, chaperones / Cytoskeleton]
Probab=35.09 E-value=6.2e+02 Score=27.51 Aligned_cols=151 Identities=16% Similarity=0.106 Sum_probs=84.2
Q ss_pred hhHHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhh--hHHH-----HHHhhc------cCchhHHHHHHHH
Q psy14014 163 GVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTD--IIPM-----FVNLAQ------DEQDSVRLLAVEA 229 (615)
Q Consensus 163 ~~~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~--ll~~-----l~~~~~------d~~~~vr~~a~~~ 229 (615)
...+-+.+.+..-..+.+..+|..++..+.++++.++.....+. +... +...++ +.++.+-..++..
T Consensus 242 ~~l~~iV~f~~~s~Ss~~~~~rf~~a~~~aki~srl~w~l~~sfi~ii~~~~en~~~s~l~~~cdii~tnel~w~~~i~~ 321 (993)
T COG5234 242 IYLEVIVDFLLSSVSSIDSFVRFSAAKGLAKIISRLPWNLAESFIDIIELMTENMFLSPLENTCDIIITNELVWHGAILF 321 (993)
T ss_pred HHHHHHHHHHHcCcccccHHHHHHHHhhHHHHHhhcccccHHHHHHHHHhcccccchhhhhCccceeecchHHHHHHHHH
Confidence 34566777777777888999999999999999998876322211 1111 222222 2344444444444
Q ss_pred HHHHHhhcChhhHHHhHHHHHHHhcCC--------CChHHHHHHHHHHHHHHHHhCccchhh---hHHHHH-HHhhcCCc
Q psy14014 230 CVSIASLLSQSDVEQLVMPTLRQCSGD--------TSWRVRYMVADKFTDLQKAVGPEITKT---DLVQAF-QMLLKDSE 297 (615)
Q Consensus 230 l~~l~~~~~~~~~~~~l~~~l~~~~~d--------~~~~vR~~~~~~l~~l~~~~~~~~~~~---~l~~~l-~~~l~d~~ 297 (615)
++ ++...+-+-..-.+.|++.+.++- +...+|.++.-.+..+.....+..... .+.-.+ .+.+-|++
T Consensus 322 ~a-la~~~~id~~d~~i~~iI~kg~~y~~~~~~~v~g~~IRdss~f~vWs~~r~~S~s~~~~lqt~L~hll~~~alFDpe 400 (993)
T COG5234 322 FA-LAGAGLIDYSDCLILPIIEKGLSYEVRYGTRVTGQSIRDSSCFFVWSFYRCYSKSAIEGLQTNLIHLLLQTALFDPE 400 (993)
T ss_pred HH-HhhccccchhhhhhhhheccccceeehheeeeccceeecccceeeeeeeeccccccchhHHHHHHHHHHhhhhcCch
Confidence 44 444433332222255555544332 223466666555555544433332211 122223 33778999
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy14014 298 AEVRAAAANKVRDFCQN 314 (615)
Q Consensus 298 ~~vr~~a~~~l~~~~~~ 314 (615)
-.+|.+|..++-+.+..
T Consensus 401 l~vRr~a~Aal~E~iGR 417 (993)
T COG5234 401 LNVRRAATAALFEVIGR 417 (993)
T ss_pred hhhhhHHHHHHHHHhcc
Confidence 99999999888776543
No 359
>COG2733 Predicted membrane protein [Function unknown]
Probab=34.48 E-value=4.8e+02 Score=26.02 Aligned_cols=27 Identities=15% Similarity=0.111 Sum_probs=18.9
Q ss_pred HHHhhhcCCchHHHHHHHHhHHHHhhh
Q psy14014 433 IVELAEDSKWRVRLAIIEYMPLLAGQL 459 (615)
Q Consensus 433 i~~~~~~~~~~vr~~~~~~l~~l~~~~ 459 (615)
+.+-.++++..+|......+..+++.+
T Consensus 306 l~~D~e~~~s~l~~~l~~~~~~~Ge~l 332 (415)
T COG2733 306 LKEDYESEDSMLRKRLARAVQSVGEEL 332 (415)
T ss_pred HHhcccCchhHHHHHHHHHHHHHHHHH
Confidence 334456778888888888877776654
No 360
>KOG1837|consensus
Probab=32.73 E-value=9.6e+02 Score=28.99 Aligned_cols=65 Identities=17% Similarity=0.161 Sum_probs=52.6
Q ss_pred hhcCCchHHHHHHHHhHHHHhhhChHhH--HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChH
Q psy14014 437 AEDSKWRVRLAIIEYMPLLAGQLGVEFF--DEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSE 501 (615)
Q Consensus 437 ~~~~~~~vr~~~~~~l~~l~~~~~~~~~--~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~ 501 (615)
..+.+.+.|..++..+..+.+.+|..+. .++.+|.+-+++.|.+.+|-..+...+.++=..+|..
T Consensus 1550 trss~~~~r~~ai~~~~~l~~~lge~~~~lL~q~iPfLaEL~ED~~~~Ve~~~q~li~q~e~~lGE~ 1616 (1621)
T KOG1837|consen 1550 TRSSSRKARYLAIIQVKLLYTKLGENVIVLLPQSIPFLAELMEDEDDEVECLCQKLIRQLEEVLGEP 1616 (1621)
T ss_pred hccccHHHHHHHHHHHHHHHHHhcchhHHhhhhhhHHHHHHHhhhHHHHHHHHHHHHHHHHHHhchh
Confidence 3566778888899999999988888763 4788998889999998888888888777777777764
No 361
>KOG4199|consensus
Probab=30.15 E-value=5.3e+02 Score=25.21 Aligned_cols=131 Identities=16% Similarity=0.107 Sum_probs=63.9
Q ss_pred hHHHHHHHHhHHHHHHH--hchhhhHhhhHHHHHHhhcc-CchhHHHHHHHHHHHHHhhcChhhHHHh---------HHH
Q psy14014 181 PMVRRAAAGKLGELAKV--VEVDYLKTDIIPMFVNLAQD-EQDSVRLLAVEACVSIASLLSQSDVEQL---------VMP 248 (615)
Q Consensus 181 ~~vR~~a~~~l~~l~~~--~~~~~~~~~ll~~l~~~~~d-~~~~vr~~a~~~l~~l~~~~~~~~~~~~---------l~~ 248 (615)
|.+-...+..++.++-. +..+.....-+..+.+.+.| .+..+|..+-+++..+-...|.+..... ++.
T Consensus 256 p~~L~~l~~tl~~lAVr~E~C~~I~e~GGl~tl~~~i~d~n~~~~r~l~k~~lslLralAG~DsvKs~IV~~gg~~~ii~ 335 (461)
T KOG4199|consen 256 PDSLVSLSTTLKALAVRDEICKSIAESGGLDTLLRCIDDSNEQGNRTLAKTCLSLLRALAGSDSVKSTIVEKGGLDKIIT 335 (461)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHhhhchhhHHHHHHHHHHHHHHHhCCCchHHHHHHhcChHHHHH
Confidence 44555555555555422 11222334456677777777 5667887777777777666666544333 233
Q ss_pred HHHHhcCCCChHHHHHHHHHHHHHHHHhCccc---hhhhHHHHHHHhhc-CC-cHHHHHHHHHHHHHHHh
Q psy14014 249 TLRQCSGDTSWRVRYMVADKFTDLQKAVGPEI---TKTDLVQAFQMLLK-DS-EAEVRAAAANKVRDFCQ 313 (615)
Q Consensus 249 ~l~~~~~d~~~~vR~~~~~~l~~l~~~~~~~~---~~~~l~~~l~~~l~-d~-~~~vr~~a~~~l~~~~~ 313 (615)
.+.+..+| +.|-..++-++..++--.+++- .....-....+.++ ++ ...|+..|+..+-.+..
T Consensus 336 l~~~h~~~--p~Vi~~~~a~i~~l~LR~pdhsa~~ie~G~a~~avqAmkahP~~a~vQrnac~~IRNiv~ 403 (461)
T KOG4199|consen 336 LALRHSDD--PLVIQEVMAIISILCLRSPDHSAKAIEAGAADLAVQAMKAHPVAAQVQRNACNMIRNIVV 403 (461)
T ss_pred HHHHcCCC--hHHHHHHHHHHHHHHhcCcchHHHHHhcchHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 33333443 4444444444444443222110 00111222233332 22 24566667766666554
No 362
>PF06371 Drf_GBD: Diaphanous GTPase-binding Domain; InterPro: IPR010473 Diaphanous-related formins (Drfs) are a family of formin homology (FH) proteins that act as effectors of Rho small GTPases during growth factor-induced cytoskeletal remodelling, stress fibre formation, and cell division []. Drf proteins are characterised by a variety of shared domains: an N-terminal GTPase-binding domain (GBD), formin-homology domains FH1, FH2 (IPR003104 from INTERPRO) and FH3 (IPR010472 from INTERPRO), and a C-terminal conserved Dia-autoregulatory domain (DAD) that binds the GBD. This entry represents the GBD, which is a bifunctional autoinhibitory domain that interacts with and is regulated by activated Rho family members. Mammalian Drf3 contains a CRIB-like motif within its GBD for binding to Cdc42, which is required for Cdc42 to activate and guide Drf3 towards the cell cortex where it remodels the actin skeleton [].; GO: 0003779 actin binding, 0017048 Rho GTPase binding, 0030036 actin cytoskeleton organization; PDB: 3OBV_A 2BNX_A 3EG5_D 2BAP_B 3O4X_B 1Z2C_B 2F31_A.
Probab=30.13 E-value=2.7e+02 Score=24.35 Aligned_cols=55 Identities=13% Similarity=0.109 Sum_probs=35.2
Q ss_pred CchHHHHHHHHHHHHHhh-hChhhH--HHhhHHHHHhhCCCCCchHHHHHHHHHHHHh
Q psy14014 519 NYLHRMTCLFCINVLAEA-CGPTVT--ANFLLPTVLNMAGDNVANVRFNVAKTLQKIG 573 (615)
Q Consensus 519 ~~~~R~~a~~~l~~l~~~-~~~~~~--~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~ 573 (615)
+...-..+++|+..++.. .|-..+ .+..+..+...+..++..+|..++..|+.++
T Consensus 129 ~~~~~~~~l~Clkal~n~~~G~~~v~~~~~~v~~i~~~L~s~~~~~r~~~leiL~~lc 186 (187)
T PF06371_consen 129 DIDIEHECLRCLKALMNTKYGLEAVLSHPDSVNLIALSLDSPNIKTRKLALEILAALC 186 (187)
T ss_dssp CHHHHHHHHHHHHHHTSSHHHHHHHHCSSSHHHHHHHT--TTSHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHccHHHHHHHHcCcHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 344556677788777653 232322 2456777777788888888888888887764
No 363
>KOG2842|consensus
Probab=29.95 E-value=5.7e+02 Score=25.48 Aligned_cols=104 Identities=18% Similarity=0.159 Sum_probs=52.6
Q ss_pred cchHHHHHHHhcCccHHHHHHHHhcHHHHHH-HhCcchhhc---cchhhhhhhcCCcH-HHHHHHHHHhcc-ccCC---C
Q psy14014 12 LYPIAVLIDELKNEDVQLRLNSIKKLSTIAL-ALGQERTRG---ELIPFLTETIYDED-EVLLALAEQLGT-FTPN---V 82 (615)
Q Consensus 12 ~~~i~~ll~~l~s~d~~~R~~a~~~l~~~~~-~~~~~~~~~---~ll~~l~~~~~~~~-~vr~~a~~~l~~-l~~~---~ 82 (615)
++.....+.+.+....+.|..+++.+..... ..-++.+.+ .+...+...++... +-...+...+|- ++.. .
T Consensus 59 ~~~~~d~lde~~dk~AktR~~~le~i~lalt~r~l~~fi~e~~~tl~~~~~k~~~k~~sd~q~~a~~~~g~~~vqlg~~q 138 (427)
T KOG2842|consen 59 EEKLKDDLDEVKDKSAKTRQEALEKIYLALTSRHLPEFILENRATLEDLLEKCLNKPKSDEQLLAAALIGLLCVQAGPGQ 138 (427)
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHhccCcc
Confidence 4556667777788889999999988776644 222332222 22233333333322 222222222221 2211 1
Q ss_pred CCcchhhhchHHHhhhhcCchhHH--HHHHHHHHH
Q psy14014 83 GGPEYVHCLLPPLESLATVEETVV--RDKAVESLR 115 (615)
Q Consensus 83 ~~~~~~~~l~~~l~~l~~~~~~~v--r~~a~~~l~ 115 (615)
.+++......|.+..+..+++..| |..++-++.
T Consensus 139 ~~ee~~~t~~~~~~li~~d~s~sv~~r~~ca~sl~ 173 (427)
T KOG2842|consen 139 EEEEWTKTLGPFLALILDDESASIKARSICATSLG 173 (427)
T ss_pred hhhHHHhccchHHHHHhhccccchHHHHHHHHHHH
Confidence 124555666777777767766544 444444443
No 364
>PF14663 RasGEF_N_2: Rapamycin-insensitive companion of mTOR RasGEF_N domain
Probab=29.64 E-value=1.1e+02 Score=24.47 Aligned_cols=33 Identities=15% Similarity=-0.048 Sum_probs=23.7
Q ss_pred hhhchhHHHHhhhcCCCchHHHHHHHHHHHHHh
Q psy14014 503 AQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAE 535 (615)
Q Consensus 503 ~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~ 535 (615)
+....++.|.+-+.|+++.++..|+..+.+.+.
T Consensus 5 f~~w~i~lLv~QL~D~~~~V~~~A~~iL~e~c~ 37 (115)
T PF14663_consen 5 FEDWGIELLVTQLYDPSPEVVAAALEILEEACE 37 (115)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHh
Confidence 344567777777888888888777777777653
No 365
>PF04821 TIMELESS: Timeless protein; InterPro: IPR006906 The timeless gene in Drosophila melanogaster (Fruit fly) and its homologues in a number of other insects and mammals (including human) are involved in circadian rhythm control []. This family includes related proteins from a number of fungal species and from Arabidopsis thaliana.
Probab=28.83 E-value=5e+02 Score=24.51 Aligned_cols=65 Identities=26% Similarity=0.306 Sum_probs=44.5
Q ss_pred CCCCCcchHHHHHHHhcCccHHHHHHHHhcHHHHHHHhCcchhhccchhhhhhhcCCcHHHHHHHHHHhcccc
Q psy14014 7 APDDSLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDEDEVLLALAEQLGTFT 79 (615)
Q Consensus 7 ~~~~~~~~i~~ll~~l~s~d~~~R~~a~~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~~vr~~a~~~l~~l~ 79 (615)
.+++.+..+..+.-.+..+|...| .+.+.++..- -....|+|+|...-+ ++.+-..+.+.|..+.
T Consensus 7 ~g~dcl~~LkdL~r~lr~dd~~~~-~v~r~lg~~~------iv~~DLiPiL~~~~~-~~~l~~~~l~LLV~LT 71 (266)
T PF04821_consen 7 KGDDCLECLKDLKRFLRRDDEDQR-DVRRQLGEWN------IVQKDLIPILISYKD-DDKLFLACLRLLVNLT 71 (266)
T ss_pred cCHhHHHHHHHHHHHHHHhCcchH-HHHHHHHHhc------hhhhhHHHHHHhccC-chHHHHHHHHHHHHhC
Confidence 466777788889999999999888 6666666552 255689999987644 3345555555555443
No 366
>KOG3036|consensus
Probab=27.82 E-value=5e+02 Score=24.14 Aligned_cols=67 Identities=10% Similarity=0.148 Sum_probs=41.0
Q ss_pred hhHHHHHHHhhcCC-CcchhhhHHhhhhhhccCCChhh-----HHHHHHHHHHHhCCCChHHHHHHHHhHHHH
Q psy14014 128 AHFVPLVQRLASGD-WFTSRTSACGLFSVCYPRVTAGV-----KAELRSHFRNLCQDDTPMVRRAAAGKLGEL 194 (615)
Q Consensus 128 ~~~l~~l~~l~~~~-~~~~r~~a~~~l~~~~~~~~~~~-----~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l 194 (615)
-++.|++.....+. ....|.++.+.++.+...-..++ ..++.|++.+.....+..-+..+...+..+
T Consensus 123 lylYpfL~Tt~~~r~fEyLRLtsLGVIgaLvk~dd~eVi~fLl~TeIVPlCLrime~GSelSKtvA~fIlqKI 195 (293)
T KOG3036|consen 123 LYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKNDDQEVIRFLLTTEIVPLCLRIMESGSELSKTVATFILQKI 195 (293)
T ss_pred hhhHHhhhccccCCchHHHhHHHHHHHHHHHhcCcHHHHHHHHHhhhHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 35667776555553 44577888888887766655443 345667777776666665555555554444
No 367
>KOG1988|consensus
Probab=27.73 E-value=9e+02 Score=27.08 Aligned_cols=107 Identities=9% Similarity=0.022 Sum_probs=61.1
Q ss_pred HHHHhhhcCCchHHHHHHHHhHHHHhhhChHhH-HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHH
Q psy14014 432 SIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFF-DEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPK 510 (615)
Q Consensus 432 ~i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~-~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~ 510 (615)
.+.+.++...|...-.++..+..+.....-..+ ...++. +.+.+.+.+.-+|-+-++..++-.+.+..-....+++.+
T Consensus 28 ~ldkGlr~~~t~eqpeavvr~~RLFek~PfpifiNs~llr-LaDaF~~Gn~llRf~V~rv~~q~g~hln~v~n~aE~lrr 106 (970)
T KOG1988|consen 28 ELDKGLRSGKTSEQPEAVVRFPRLFEKYPFPIFINSQLLR-LADAFPVGNNLLRFAVLRVDQQSGKHLNKVLNGAEFLRR 106 (970)
T ss_pred HHhhcccccccccchHHHHHHHHHHhhCCchhhhhHHHHH-HHHHhccCcHHHHHHHHHHHhhccccchhhhhhhhhhhe
Confidence 344555656665555555555555443333222 233333 445566667778888777776544444332223345555
Q ss_pred HHhhhcCCCchHHHHHHHHHHHHHhhhCh
Q psy14014 511 VVAMSRDQNYLHRMTCLFCINVLAEACGP 539 (615)
Q Consensus 511 l~~~~~d~~~~~R~~a~~~l~~l~~~~~~ 539 (615)
+......++|..|..++..+|.+....++
T Consensus 107 i~~V~hsnDp~aRAllL~ilg~~s~lipE 135 (970)
T KOG1988|consen 107 IFYVDHSNDPVARALLLRILGQLSALIPE 135 (970)
T ss_pred eEEeecCCCHHHHHHHHHHHHHhhhhccc
Confidence 55556667777888888888887765554
No 368
>KOG1222|consensus
Probab=27.25 E-value=7.1e+02 Score=25.69 Aligned_cols=56 Identities=14% Similarity=0.197 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHh--chhhhHhhhHHHHHHhhccCch
Q psy14014 165 KAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVV--EVDYLKTDIIPMFVNLAQDEQD 220 (615)
Q Consensus 165 ~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~--~~~~~~~~ll~~l~~~~~d~~~ 220 (615)
...+...+.+++....++.|+..+..+-.++-.. .+......++|.+..++.++..
T Consensus 343 ~~~iveKL~klfp~~h~dL~~~tl~LlfNlSFD~glr~KMv~~GllP~l~~ll~~d~~ 400 (791)
T KOG1222|consen 343 QNGIVEKLLKLFPIQHPDLRKATLMLLFNLSFDSGLRPKMVNGGLLPHLASLLDSDTK 400 (791)
T ss_pred hccHHHHHHHhcCCCCHHHHHHHHHHhhhccccccccHHHhhccchHHHHHHhCCccc
Confidence 3456777788888888899998888776664322 2234456788988888876543
No 369
>PF12333 Ipi1_N: Rix1 complex component involved in 60S ribosome maturation; InterPro: IPR024679 This domain is found in IPI1, which is a component of the Rix1 complex involved in pre-rRNA-processing [, ]. It is also found in testis-expressed sequence 10 protein, a nuclear membrane protein, which is a component of the MLL1/MLL complex [].
Probab=27.22 E-value=2.2e+02 Score=22.14 Aligned_cols=53 Identities=17% Similarity=0.077 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHh---hhchhHHHHhhhcC
Q psy14014 465 DEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWA---QSTVIPKVVAMSRD 517 (615)
Q Consensus 465 ~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~---~~~i~~~l~~~~~d 517 (615)
.+.++.++...+++-..+||.-|+..+..+.+.++.... ...+++.+.+++..
T Consensus 9 ~~~l~~~i~sAMTHi~~~Ir~dsl~~L~~lL~~~p~~~~~~~~~kil~~f~~ll~~ 64 (102)
T PF12333_consen 9 FPLLMLYISSAMTHISPDIREDSLKFLDLLLEHAPDELCSGGWVKILPNFLDLLGW 64 (102)
T ss_pred HHHHHHHHHHHHHhCCHHHHHhHHHHHHHHHHHCChHhHhhhHHHHHHHHHHHHCC
Confidence 345666677778888899999999999999998876521 12356666665543
No 370
>PF04388 Hamartin: Hamartin protein; InterPro: IPR007483 This family includes the hamartin protein which is thought to function as a tumour suppressor. The hamartin protein interacts with the tuberin protein IPR003913 from INTERPRO. Tuberous sclerosis complex (TSC) is an autosomal dominant disorder and is characterised by the presence of hamartomas in many organs, such as brain, skin, heart, lung, and kidney. It is caused by mutation in either TSC1 or TSC2 tumour suppressor genes. TSC1 encodes a protein, hamartin, containing two coiled-coil regions, which have been shown to mediate binding to tuberin. The TSC2 gene codes for tuberin IPR003913 from INTERPRO. These two proteins function within the same pathway(s) regulating cell cycle, cell growth, adhesion, and vesicular trafficking [].
Probab=26.65 E-value=8.9e+02 Score=26.66 Aligned_cols=88 Identities=14% Similarity=0.090 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHhchh---hhHhhhHHHHHHh-hccCchhHHHHHHHHHHHHHhhcChh
Q psy14014 165 KAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVD---YLKTDIIPMFVNL-AQDEQDSVRLLAVEACVSIASLLSQS 240 (615)
Q Consensus 165 ~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~~~~---~~~~~ll~~l~~~-~~d~~~~vr~~a~~~l~~l~~~~~~~ 240 (615)
-+.++..+-..+.. +.-|..++..|+.+...-++. .....+++-+... ..|.+..+-..|+.+|..+...++..
T Consensus 68 ~K~~~~~l~~~~~~--~~~Rl~~L~Ll~~~v~~qp~~l~~i~~t~Lf~~LLk~L~~D~~~~~~~~al~~LimlLP~ip~~ 145 (668)
T PF04388_consen 68 DKHLFDKLNDYFVK--PSYRLQALTLLGHFVRSQPPWLYKILQTPLFKSLLKCLQFDTSITVVSSALLVLIMLLPHIPSS 145 (668)
T ss_pred HHHHHHHHHHHHcC--chhHHHHHHHHHHHHhcCCchHHHHhcChhHHHHHHHHhhcccHHHHHHHHHHHHHHhccccch
Confidence 35566666666664 467888888888888765442 2233455544444 45888899999999999998888753
Q ss_pred --hHHHhHHHHHHHhc
Q psy14014 241 --DVEQLVMPTLRQCS 254 (615)
Q Consensus 241 --~~~~~l~~~l~~~~ 254 (615)
.+.+.++.++..++
T Consensus 146 l~~~L~~Lf~If~Rl~ 161 (668)
T PF04388_consen 146 LGPHLPDLFNIFGRLL 161 (668)
T ss_pred hhHHHHHHHHHHHHHH
Confidence 44556666665554
No 371
>KOG3036|consensus
Probab=26.04 E-value=5.4e+02 Score=23.94 Aligned_cols=55 Identities=20% Similarity=0.328 Sum_probs=37.4
Q ss_pred CChHHHHHHHHhHHHHHHHhchhh----hHhhhHHHHHHhhccCchhHHHHHHHHHHHH
Q psy14014 179 DTPMVRRAAAGKLGELAKVVEVDY----LKTDIIPMFVNLAQDEQDSVRLLAVEACVSI 233 (615)
Q Consensus 179 ~~~~vR~~a~~~l~~l~~~~~~~~----~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l 233 (615)
+....|-.++..+|.+.+.-.++. ...+++|...+....+++.-+..|...+..+
T Consensus 137 ~fEyLRLtsLGVIgaLvk~dd~eVi~fLl~TeIVPlCLrime~GSelSKtvA~fIlqKI 195 (293)
T KOG3036|consen 137 PFEYLRLTSLGVIGALVKNDDQEVIRFLLTTEIVPLCLRIMESGSELSKTVATFILQKI 195 (293)
T ss_pred chHHHhHHHHHHHHHHHhcCcHHHHHHHHHhhhHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 456788888888888887655542 2456777777777766666666666665544
No 372
>PF06371 Drf_GBD: Diaphanous GTPase-binding Domain; InterPro: IPR010473 Diaphanous-related formins (Drfs) are a family of formin homology (FH) proteins that act as effectors of Rho small GTPases during growth factor-induced cytoskeletal remodelling, stress fibre formation, and cell division []. Drf proteins are characterised by a variety of shared domains: an N-terminal GTPase-binding domain (GBD), formin-homology domains FH1, FH2 (IPR003104 from INTERPRO) and FH3 (IPR010472 from INTERPRO), and a C-terminal conserved Dia-autoregulatory domain (DAD) that binds the GBD. This entry represents the GBD, which is a bifunctional autoinhibitory domain that interacts with and is regulated by activated Rho family members. Mammalian Drf3 contains a CRIB-like motif within its GBD for binding to Cdc42, which is required for Cdc42 to activate and guide Drf3 towards the cell cortex where it remodels the actin skeleton [].; GO: 0003779 actin binding, 0017048 Rho GTPase binding, 0030036 actin cytoskeleton organization; PDB: 3OBV_A 2BNX_A 3EG5_D 2BAP_B 3O4X_B 1Z2C_B 2F31_A.
Probab=25.22 E-value=3.6e+02 Score=23.50 Aligned_cols=56 Identities=18% Similarity=0.169 Sum_probs=37.5
Q ss_pred cchHHHHHHHHHHHHHHHH-hChHHh--hhchhHHHHhhhcCCCchHHHHHHHHHHHHH
Q psy14014 479 HVYAIREAATLNLKKLVEQ-FGSEWA--QSTVIPKVVAMSRDQNYLHRMTCLFCINVLA 534 (615)
Q Consensus 479 ~~~~vR~~a~~~l~~l~~~-~~~~~~--~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~ 534 (615)
.....-..++.|+..+.+. .|-+.. .+..++.+...+..+++.+|..++..|+.++
T Consensus 128 ~~~~~~~~~l~Clkal~n~~~G~~~v~~~~~~v~~i~~~L~s~~~~~r~~~leiL~~lc 186 (187)
T PF06371_consen 128 EDIDIEHECLRCLKALMNTKYGLEAVLSHPDSVNLIALSLDSPNIKTRKLALEILAALC 186 (187)
T ss_dssp TCHHHHHHHHHHHHHHTSSHHHHHHHHCSSSHHHHHHHT--TTSHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHccHHHHHHHHcCcHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 4455667777777776542 232222 2457788888888999999999999888764
No 373
>KOG0929|consensus
Probab=25.10 E-value=1.3e+03 Score=28.05 Aligned_cols=228 Identities=13% Similarity=0.135 Sum_probs=118.8
Q ss_pred HHHhCCCChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcChh------hHHHhH
Q psy14014 173 RNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQS------DVEQLV 246 (615)
Q Consensus 173 ~~l~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~------~~~~~l 246 (615)
...-...+.+||..+++++..-. +..|..++.++.....|.+..+-+.+.+.+..+....... .-....
T Consensus 1043 ~im~~s~s~~Irelv~rC~~~ni-----kSGWk~if~i~~~aA~~~~~~iv~~~fe~v~~i~~~~f~~~~~~~~~sf~d~ 1117 (1514)
T KOG0929|consen 1043 HIMKRSSSAEIRELVVRCISSNI-----KSGWKNIFKIFTTAASDSSKNIVELAFETVSKILQELFENVFPQEMDSFKDC 1117 (1514)
T ss_pred HHhhccCcchhHHHHHhhhhhhh-----hhhhhHHHHHHHHhhccchhhHHHHhHHHHHHHHHHhhhhhchhhhHHHHHH
Confidence 34445678899999999888332 2347888999988888888888888888777443332221 112234
Q ss_pred HHHHHHhcCCC-ChHHHHHHHHHH----HHHHHH-----hC------ccchhhhHHHH---HHHhhcCCcHHHHHHHHHH
Q psy14014 247 MPTLRQCSGDT-SWRVRYMVADKF----TDLQKA-----VG------PEITKTDLVQA---FQMLLKDSEAEVRAAAANK 307 (615)
Q Consensus 247 ~~~l~~~~~d~-~~~vR~~~~~~l----~~l~~~-----~~------~~~~~~~l~~~---l~~~l~d~~~~vr~~a~~~ 307 (615)
++.+.++..+. .|..-..++..+ ..+.+. +. .+.....-.|. +.....+...+||..+...
T Consensus 1118 v~cl~~F~~~~~~~~~s~~aI~~lr~ca~k~~e~~~~~~~~~~~~~~~~~~~~~wfP~l~~ls~i~~~~~~~vr~~al~v 1197 (1514)
T KOG0929|consen 1118 VKCLEEFTKNLGFPDDSLNAIRFLRLCALKLAEGVYNEKLKVGKDSEFDVWNSGWFPMLFQLSKIINDYRLEVRKRALEV 1197 (1514)
T ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHHHhccccchhhcccccccccccceeeeehhHhhhhHHhhccHHHHHHHHHHH
Confidence 44444443221 111111111111 111111 11 01111122333 3344457889999999999
Q ss_pred HHHHHhhccccchhHHHHHhhH----HHHHHhhCCC-----CHHHHHHHHHHHHhhchhhcc--h---hhhhhhHHHHHH
Q psy14014 308 VRDFCQNLDAYNQENIIMTYIL----PYVKDLVADP-----NQHVKSALASVIMGLSPILGK--H---NTVDHLLPLFLS 373 (615)
Q Consensus 308 l~~~~~~~~~~~~~~~~~~~l~----p~l~~~~~d~-----~~~vR~~~~~~l~~l~~~~g~--~---~~~~~l~p~l~~ 373 (615)
+-.+....+..... .+++.++ |.+..+-.+. +.....++..++..++..+.. + ...+.++-.+..
T Consensus 1198 lF~il~~~g~~F~~-~~We~v~~~~fpIF~~~~~~~~~~~~~eW~~tT~~~Al~~~v~lf~~~~~~l~~lL~~~~~ll~~ 1276 (1514)
T KOG0929|consen 1198 LFDILKEHGDDFSK-EFWEDVFRILFPIFDNVKLDEDESEKDEWLSTTCNHALQALVDLFTQFFKQLNNLLPKVLGLLVG 1276 (1514)
T ss_pred HHHHHHhhhhhccH-HHHHHHHHheeecccccCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887766555443 2344333 3332222222 223345555666666655443 1 122233334444
Q ss_pred hhcCCChhHHHHHHHhhhHhhh----hhchhHHHHHH
Q psy14014 374 QLKDECPEVRLNIISNLDCVNE----VIGIQQWRVRL 406 (615)
Q Consensus 374 ~l~d~~~~vr~~a~~~l~~l~~----~~~~~~~~~~~ 406 (615)
++..++..+-..-..+|..++. .+.+..|.+..
T Consensus 1277 ci~~~n~~la~~g~~cl~~l~~~n~~~fse~~Wde~~ 1313 (1514)
T KOG0929|consen 1277 CIKQDNQQLARIGTSCLLQLVSSNGEKFSEEDWDEIC 1313 (1514)
T ss_pred HhcCcchhhHHhHHHHHHHHHHhcccccCHhhHHHHH
Confidence 5555666665555566655543 44567787654
No 374
>COG5101 CRM1 Importin beta-related nuclear transport receptor [Nuclear structure / Intracellular trafficking and secretion]
Probab=24.87 E-value=8.9e+02 Score=26.06 Aligned_cols=76 Identities=9% Similarity=0.103 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhh------hchhHH----HHhhhcCCCchHHHHHHHHHHHH
Q psy14014 464 FDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQ------STVIPK----VVAMSRDQNYLHRMTCLFCINVL 533 (615)
Q Consensus 464 ~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~------~~i~~~----l~~~~~d~~~~~R~~a~~~l~~l 533 (615)
|...++..++.++......|+.-|+.++-.++..+..++.. +.++.. +...-.|-.|.......+++|-+
T Consensus 567 FLkTVv~KLFEFMhE~HEGvqDMACDtFiKIvqKC~~hFv~Qq~gesEpFI~~Iirnl~ktT~dL~pqQ~htfYeAcg~v 646 (1053)
T COG5101 567 FLKTVVKKLFEFMHEDHEGVQDMACDTFIKIVQKCPVHFVTQQEGESEPFIVYIIRNLPKTTGDLEPQQKHTFYEACGMV 646 (1053)
T ss_pred HHHHHHHHHHHHHhhhhhhHHhhhHHHHHHHHHhCcHHHhhcCCCCCCcHHHHHHHhhhhhcccCChHHHhHHHHHHhHH
Confidence 34556777888888888899999999999999988765432 123333 33344566777777788888887
Q ss_pred HhhhCh
Q psy14014 534 AEACGP 539 (615)
Q Consensus 534 ~~~~~~ 539 (615)
....+.
T Consensus 647 Ise~p~ 652 (1053)
T COG5101 647 ISEVPK 652 (1053)
T ss_pred Hhccch
Confidence 755443
No 375
>PF11919 DUF3437: Domain of unknown function (DUF3437); InterPro: IPR021843 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is typically between 142 to 163 amino acids in length. ; PDB: 3L5Q_6 1VSY_5.
Probab=24.70 E-value=3.2e+02 Score=20.79 Aligned_cols=54 Identities=22% Similarity=0.183 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHhhhChhh--HHHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhh
Q psy14014 522 HRMTCLFCINVLAEACGPTV--TANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPIL 576 (615)
Q Consensus 522 ~R~~a~~~l~~l~~~~~~~~--~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~ 576 (615)
.|-+++.+|+.+....+.+. +.+.++..|.+..+| ..-++..+-++|+.+-..-
T Consensus 5 ~rH~~VLGL~Alv~a~Py~vP~w~P~~l~~La~~~~~-~~~I~~tvk~tl~eFkrtH 60 (90)
T PF11919_consen 5 RRHAAVLGLSALVLAFPYDVPPWMPEVLEELARHAND-PQPIRTTVKKTLSEFKRTH 60 (90)
T ss_dssp HHHHHHHHHHHHHTT-S--SS-HHHHHHHHHHTTSSS--SSHHHHTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHhCC-CchHHHHHHHHHHHHHHhC
Confidence 46777888888887655432 456666667777776 6678888899998887554
No 376
>PF09759 Atx10homo_assoc: Spinocerebellar ataxia type 10 protein domain; InterPro: IPR019156 This is the conserved C-terminal 100 residues of Ataxin-10. Ataxin-10 belongs to the family of armadillo repeat proteins and in solution it tends to form homotrimeric complexes, which associate via a tip-to-tip association in a horseshoe-shaped contact with the concave sides of the molecules facing each other. This domain may represent the homo-association site since that is located near the C terminus of Ataxin-10. The protein does not contain a signal sequence for secretion or any subcellular compartment confirming its cytoplasmic localisation, specifically to the olivocerebellar region [].
Probab=24.57 E-value=2.4e+02 Score=22.04 Aligned_cols=33 Identities=18% Similarity=0.203 Sum_probs=23.1
Q ss_pred hHHHHHHhhc--cCchhHHHHHHHHHHHHHhhcCh
Q psy14014 207 IIPMFVNLAQ--DEQDSVRLLAVEACVSIASLLSQ 239 (615)
Q Consensus 207 ll~~l~~~~~--d~~~~vr~~a~~~l~~l~~~~~~ 239 (615)
-+|.+++.+. |.++.+|+.|+.++..+++.-++
T Consensus 29 Gi~liL~~c~iD~~nP~irEwai~aiRnL~e~n~e 63 (102)
T PF09759_consen 29 GIPLILSCCNIDDHNPFIREWAIFAIRNLCEGNPE 63 (102)
T ss_pred ChHHHHHhcCCCcccHHHHHHHHHHHHHHHhCCHH
Confidence 4666655543 66788899988888888765543
No 377
>PF04388 Hamartin: Hamartin protein; InterPro: IPR007483 This family includes the hamartin protein which is thought to function as a tumour suppressor. The hamartin protein interacts with the tuberin protein IPR003913 from INTERPRO. Tuberous sclerosis complex (TSC) is an autosomal dominant disorder and is characterised by the presence of hamartomas in many organs, such as brain, skin, heart, lung, and kidney. It is caused by mutation in either TSC1 or TSC2 tumour suppressor genes. TSC1 encodes a protein, hamartin, containing two coiled-coil regions, which have been shown to mediate binding to tuberin. The TSC2 gene codes for tuberin IPR003913 from INTERPRO. These two proteins function within the same pathway(s) regulating cell cycle, cell growth, adhesion, and vesicular trafficking [].
Probab=24.31 E-value=9.8e+02 Score=26.34 Aligned_cols=146 Identities=14% Similarity=0.107 Sum_probs=83.1
Q ss_pred HHHhhhcCCchHHHHHHHHhHHHHhhhChHhHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHH
Q psy14014 433 IVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVV 512 (615)
Q Consensus 433 i~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~ 512 (615)
+..++++.+-.+.+.+-..+......-...++...++.+.++ ..+..++..++. +... ....++..|-
T Consensus 9 l~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~y~~~----------t~s~~~~~il~~-~~~P-~~K~~~~~l~ 76 (668)
T PF04388_consen 9 LLSLLESNDLSVLEEIKALLQELLNSDREPWLVNGLVDYYLS----------TNSQRALEILVG-VQEP-HDKHLFDKLN 76 (668)
T ss_pred HHHHhcCCchhhHHHHHHHHHHHhhccchHHHHHHHHHHHhh----------cCcHHHHHHHHh-cCCc-cHHHHHHHHH
Confidence 444556666666666666555544332223444444443322 222222223332 2211 1134666676
Q ss_pred hhhcCCCchHHHHHHHHHHHHHhhhChhhH---HHhhHHHHHhh-CCCCCchHHHHHHHHHHHHhHhhhhh--hHHhhHH
Q psy14014 513 AMSRDQNYLHRMTCLFCINVLAEACGPTVT---ANFLLPTVLNM-AGDNVANVRFNVAKTLQKIGPILETN--VIQSQVK 586 (615)
Q Consensus 513 ~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~---~~~i~~~l~~~-~~D~~~~vr~~a~~~l~~l~~~~~~~--~~~~~~~ 586 (615)
+.+..+ ..|..++..|+.+...-++... ...+++.|.++ ..|.+..+-..|+.+|-.+++.++.. .+.+.+.
T Consensus 77 ~~~~~~--~~Rl~~L~Ll~~~v~~qp~~l~~i~~t~Lf~~LLk~L~~D~~~~~~~~al~~LimlLP~ip~~l~~~L~~Lf 154 (668)
T PF04388_consen 77 DYFVKP--SYRLQALTLLGHFVRSQPPWLYKILQTPLFKSLLKCLQFDTSITVVSSALLVLIMLLPHIPSSLGPHLPDLF 154 (668)
T ss_pred HHHcCc--hhHHHHHHHHHHHHhcCCchHHHHhcChhHHHHHHHHhhcccHHHHHHHHHHHHHHhccccchhhHHHHHHH
Confidence 766654 5799999999999876555432 23466666664 57999999999999999999887632 2334444
Q ss_pred HHHhhh
Q psy14014 587 PALDKL 592 (615)
Q Consensus 587 ~~l~~l 592 (615)
.+..+|
T Consensus 155 ~If~Rl 160 (668)
T PF04388_consen 155 NIFGRL 160 (668)
T ss_pred HHHHHH
Confidence 444444
No 378
>PF08158 NUC130_3NT: NUC130/3NT domain; InterPro: IPR012977 This N-terminal domain is found in a novel nucleolar protein family defined by NUC130/133 [].
Probab=23.21 E-value=1.3e+02 Score=20.01 Aligned_cols=30 Identities=27% Similarity=0.119 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHhHHHH
Q psy14014 165 KAELRSHFRNLCQDDTPMVRRAAAGKLGEL 194 (615)
Q Consensus 165 ~~~l~~~l~~l~~d~~~~vR~~a~~~l~~l 194 (615)
.+++...+..-...=+++.|...+.+|..+
T Consensus 17 p~~L~~lL~~~~~~L~p~lR~~lv~aLiLL 46 (52)
T PF08158_consen 17 PQELIDLLRNHHTVLDPDLRMKLVKALILL 46 (52)
T ss_pred HHHHHHHHHhccccCCHHHHHHHHHHHHHH
Confidence 344555555555556889999988888765
No 379
>KOG1789|consensus
Probab=22.69 E-value=1.3e+03 Score=27.00 Aligned_cols=96 Identities=18% Similarity=0.133 Sum_probs=55.7
Q ss_pred CCCChHHHHHHHHhHHHHHHHhc--hhhhHhhhHHHHHHhhccCchhHHHHHHHHHHHHHhhcC--hhhHHH-hHHHHHH
Q psy14014 177 QDDTPMVRRAAAGKLGELAKVVE--VDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLS--QSDVEQ-LVMPTLR 251 (615)
Q Consensus 177 ~d~~~~vR~~a~~~l~~l~~~~~--~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~--~~~~~~-~l~~~l~ 251 (615)
...++.+.+.|++.+..+....+ ........+..+.+++ +..+..|..++..+-.+++.-. .+.... .++.++.
T Consensus 1782 ~~~~~~iq~LaL~Vi~~~Tan~~Cv~~~a~~~vL~~LL~lL-HS~PS~R~~vL~vLYAL~S~~~i~keA~~hg~l~yil~ 1860 (2235)
T KOG1789|consen 1782 CRKHPKLQILALQVILLATANKECVTDLATCNVLTTLLTLL-HSQPSMRARVLDVLYALSSNGQIGKEALEHGGLMYILS 1860 (2235)
T ss_pred HcCCchHHHHHHHHHHHHhcccHHHHHHHhhhHHHHHHHHH-hcChHHHHHHHHHHHHHhcCcHHHHHHHhcCchhhhhH
Confidence 34566777777776655543211 1111222344444444 5667889988888877765321 121111 1333344
Q ss_pred HhcCCCChHHHHHHHHHHHHHH
Q psy14014 252 QCSGDTSWRVRYMVADKFTDLQ 273 (615)
Q Consensus 252 ~~~~d~~~~vR~~~~~~l~~l~ 273 (615)
-++...+.++|.++++.++++.
T Consensus 1861 ~~c~~~~~QqRAqaAeLlaKl~ 1882 (2235)
T KOG1789|consen 1861 ILCLTNSDQQRAQAAELLAKLQ 1882 (2235)
T ss_pred HHhccCcHHHHHHHHHHHHHhh
Confidence 4567788899999999998875
No 380
>PF09759 Atx10homo_assoc: Spinocerebellar ataxia type 10 protein domain; InterPro: IPR019156 This is the conserved C-terminal 100 residues of Ataxin-10. Ataxin-10 belongs to the family of armadillo repeat proteins and in solution it tends to form homotrimeric complexes, which associate via a tip-to-tip association in a horseshoe-shaped contact with the concave sides of the molecules facing each other. This domain may represent the homo-association site since that is located near the C terminus of Ataxin-10. The protein does not contain a signal sequence for secretion or any subcellular compartment confirming its cytoplasmic localisation, specifically to the olivocerebellar region [].
Probab=22.67 E-value=2.7e+02 Score=21.77 Aligned_cols=32 Identities=28% Similarity=0.364 Sum_probs=23.8
Q ss_pred hhHHHHhhh--cCCCchHHHHHHHHHHHHHhhhC
Q psy14014 507 VIPKVVAMS--RDQNYLHRMTCLFCINVLAEACG 538 (615)
Q Consensus 507 i~~~l~~~~--~d~~~~~R~~a~~~l~~l~~~~~ 538 (615)
-+|.+++.+ .+.||..|..|+.|+..+.+...
T Consensus 29 Gi~liL~~c~iD~~nP~irEwai~aiRnL~e~n~ 62 (102)
T PF09759_consen 29 GIPLILSCCNIDDHNPFIREWAIFAIRNLCEGNP 62 (102)
T ss_pred ChHHHHHhcCCCcccHHHHHHHHHHHHHHHhCCH
Confidence 467777643 45688999999999999886543
No 381
>COG5330 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.57 E-value=3.3e+02 Score=26.84 Aligned_cols=61 Identities=10% Similarity=0.055 Sum_probs=27.6
Q ss_pred HHhhhcCCCchHHHHHHHHHHHHHhhhC-hhhHHHhhHHHHHhhCCCCCchHHHHHHHHHHH
Q psy14014 511 VVAMSRDQNYLHRMTCLFCINVLAEACG-PTVTANFLLPTVLNMAGDNVANVRFNVAKTLQK 571 (615)
Q Consensus 511 l~~~~~d~~~~~R~~a~~~l~~l~~~~~-~~~~~~~i~~~l~~~~~D~~~~vr~~a~~~l~~ 571 (615)
++.+.++++.-.|..++..++......+ ...-..+..+.+..++.|+.+.||..++.+|++
T Consensus 12 ~i~~~~~a~~~eR~~~A~~l~~~~~~~~~sr~d~~~~~~l~~~Ll~d~s~~vrr~lA~aL~~ 73 (364)
T COG5330 12 LIRLLEEASSGERALAARVLAFASLQRPLSREDMRQFEDLARPLLDDSSEEVRRELAAALAQ 73 (364)
T ss_pred HHHHhcCCChhHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhhCccHHHHHHHHHHHHh
Confidence 3444455555555444444444332222 111123344444445555555555555555544
No 382
>KOG1988|consensus
Probab=22.36 E-value=1.1e+03 Score=26.44 Aligned_cols=104 Identities=12% Similarity=0.095 Sum_probs=64.9
Q ss_pred HhcCCcchHHHHHHHHHHHHHHHHhChHHhhhchhHHHHhhhcCCCchHHHHHHHHHHHHHhhhChhhHHHhhHHHHHhh
Q psy14014 474 TWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNM 553 (615)
Q Consensus 474 ~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~~~~~~~i~~~l~~~ 553 (615)
+.+....+.-.-.+...+..+........+.+..+=.|.+.+.+++...|...++..+.-.++..+-.....++--+...
T Consensus 31 kGlr~~~t~eqpeavvr~~RLFek~PfpifiNs~llrLaDaF~~Gn~llRf~V~rv~~q~g~hln~v~n~aE~lrri~~V 110 (970)
T KOG1988|consen 31 KGLRSGKTSEQPEAVVRFPRLFEKYPFPIFINSQLLRLADAFPVGNNLLRFAVLRVDQQSGKHLNKVLNGAEFLRRIFYV 110 (970)
T ss_pred hcccccccccchHHHHHHHHHHhhCCchhhhhHHHHHHHHHhccCcHHHHHHHHHHHhhccccchhhhhhhhhhheeEEe
Confidence 33443334344455555555554433333334455566777888899999999998887655555433333333333344
Q ss_pred CCCCCchHHHHHHHHHHHHhHhhh
Q psy14014 554 AGDNVANVRFNVAKTLQKIGPILE 577 (615)
Q Consensus 554 ~~D~~~~vr~~a~~~l~~l~~~~~ 577 (615)
....||.-|..++..++.+....+
T Consensus 111 ~hsnDp~aRAllL~ilg~~s~lip 134 (970)
T KOG1988|consen 111 DHSNDPVARALLLRILGQLSALIP 134 (970)
T ss_pred ecCCCHHHHHHHHHHHHHhhhhcc
Confidence 567888999999999999877665
No 383
>PF01465 GRIP: GRIP domain; InterPro: IPR000237 The GRIP (golgin-97, RanBP2alpha,Imh1p and p230/golgin-245) domain [, , ] is found in many large coiled-coil proteins. It has been shown to be sufficient for targeting to the Golgi []. The GRIP domain contains a completely conserved tyrosine residue.; GO: 0005515 protein binding, 0000042 protein targeting to Golgi; PDB: 1R4A_H 1UPT_B.
Probab=21.83 E-value=1.9e+02 Score=18.63 Aligned_cols=33 Identities=15% Similarity=0.179 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhCCCChHHHHHHHHhHHHHHHHh
Q psy14014 166 AELRSHFRNLCQDDTPMVRRAAAGKLGELAKVV 198 (615)
Q Consensus 166 ~~l~~~l~~l~~d~~~~vR~~a~~~l~~l~~~~ 198 (615)
+++.+.+.+++..+++..|...+.+++.+.+.-
T Consensus 6 eYLKNvl~~fl~~~~~~~~~~llpvi~tlL~fs 38 (46)
T PF01465_consen 6 EYLKNVLLQFLESREPSEREQLLPVIATLLKFS 38 (46)
T ss_dssp HHHHHHHHHHHTTSS---HHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHhcCCchhhHHHHHHHHHHHHCCC
Confidence 455666777777777778877777777665543
No 384
>KOG0905|consensus
Probab=21.31 E-value=5.3e+02 Score=30.05 Aligned_cols=112 Identities=20% Similarity=0.241 Sum_probs=0.0
Q ss_pred CChHHHHHHHHhHHHHHHHhchhhhHhhhHHHHHHhhc----cCchhHHHHHHHHHHHHHhhcChhhHHHhHHHHHHHhc
Q psy14014 179 DTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQ----DEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCS 254 (615)
Q Consensus 179 ~~~~vR~~a~~~l~~l~~~~~~~~~~~~ll~~l~~~~~----d~~~~vr~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~ 254 (615)
+|.+||+.|++-++.+.. ...-+.+|-+.+.++ .+++-||-.--.++..+ .+...+.-.|...+
T Consensus 902 PDqeVR~~AVqwi~~ls~-----DeL~d~LPQlVQALK~E~yl~S~Lv~FLL~rsl~sl-------~~ah~lYWlLk~~l 969 (1639)
T KOG0905|consen 902 PDQEVRAHAVQWIARLSN-----DELLDYLPQLVQALKFELYLKSALVQFLLSRSLVSL-------QFAHELYWLLKDAL 969 (1639)
T ss_pred CcHHHHHHHHHHHHhcCc-----HHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHhcch-------HHHHHHHHHHhhcc
Q ss_pred CCCChHHHHHHHHHHHHHHHHhCccchhhhHHHH-HHHhhcCCcHHHHHHH
Q psy14014 255 GDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQA-FQMLLKDSEAEVRAAA 304 (615)
Q Consensus 255 ~d~~~~vR~~~~~~l~~l~~~~~~~~~~~~l~~~-l~~~l~d~~~~vr~~a 304 (615)
.|....+|+ =..++.+....|+.+..+-.... +.+.|.+--..||+++
T Consensus 970 ~d~qfs~rY--q~ll~aLl~~~gk~L~~ef~~Q~~Lv~~L~~iae~Vr~as 1018 (1639)
T KOG0905|consen 970 DDSQFSLRY--QNLLAALLDCCGKNLREEFKKQHKLVNELGSIAEDVRSAS 1018 (1639)
T ss_pred ccceeehHH--HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
No 385
>COG5330 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.23 E-value=4.8e+02 Score=25.82 Aligned_cols=61 Identities=16% Similarity=0.023 Sum_probs=36.9
Q ss_pred HHHHhCCCChHHHHHHHHhHHHHHHHhc-hhhhHhhhHHHHHHhhccCchhHHHHHHHHHHH
Q psy14014 172 FRNLCQDDTPMVRRAAAGKLGELAKVVE-VDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVS 232 (615)
Q Consensus 172 l~~l~~d~~~~vR~~a~~~l~~l~~~~~-~~~~~~~ll~~l~~~~~d~~~~vr~~a~~~l~~ 232 (615)
++.+.++++..-|..++..++......+ .......+.+.+..++.|.++.+|..+..+|..
T Consensus 12 ~i~~~~~a~~~eR~~~A~~l~~~~~~~~~sr~d~~~~~~l~~~Ll~d~s~~vrr~lA~aL~~ 73 (364)
T COG5330 12 LIRLLEEASSGERALAARVLAFASLQRPLSREDMRQFEDLARPLLDDSSEEVRRELAAALAQ 73 (364)
T ss_pred HHHHhcCCChhHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhhCccHHHHHHHHHHHHh
Confidence 4555666666666666665555444333 223344566666777777777777777776655
No 386
>PF12612 TFCD_C: Tubulin folding cofactor D C terminal; InterPro: IPR022577 This region is found in eukaryotes, and is typically between 182 and 199 amino acids in length. There is a single completely conserved residue R that may be functionally important. Tubulin folding cofactor D does not co-polymerise with microtubules either in vivo or in vitro, but instead modulates microtubule dynamics by sequestering beta-tubulin from GTP-bound alphabeta-heterodimers in microtubules [].
Probab=20.79 E-value=5.9e+02 Score=22.52 Aligned_cols=29 Identities=17% Similarity=0.241 Sum_probs=18.9
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHH
Q psy14014 467 KLNALCMTWLVDHVYAIREAATLNLKKLV 495 (615)
Q Consensus 467 ~l~~~l~~~l~d~~~~vR~~a~~~l~~l~ 495 (615)
.++..+++...++-..||..|..++..+.
T Consensus 7 ~~~~~llrqa~EKiDrvR~~A~~~l~~ll 35 (193)
T PF12612_consen 7 QIIGGLLRQAAEKIDRVREVAGKCLQRLL 35 (193)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444555555566667888877777776
No 387
>KOG4524|consensus
Probab=20.79 E-value=1.3e+03 Score=26.39 Aligned_cols=87 Identities=10% Similarity=0.107 Sum_probs=61.9
Q ss_pred hhHHHHhhhcCCCchHHHHHHHHHHHHHhhhCh--hhH---HHhhHHHHHhhCCCCCchHHHHHHHHHHHHhHhhhh---
Q psy14014 507 VIPKVVAMSRDQNYLHRMTCLFCINVLAEACGP--TVT---ANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILET--- 578 (615)
Q Consensus 507 i~~~l~~~~~d~~~~~R~~a~~~l~~l~~~~~~--~~~---~~~i~~~l~~~~~D~~~~vr~~a~~~l~~l~~~~~~--- 578 (615)
|+-....++.+++-..|..++.++.-....+.. +.+ .+...|.+...+.++++-+-..|++++.+++.+.|+
T Consensus 804 Il~r~~~~LS~e~l~irvkaLdvl~~gl~~La~~~n~LlPlvhq~W~~vie~~~~k~~L~v~~a~~~i~~m~~~sgDFv~ 883 (1014)
T KOG4524|consen 804 ILGRGIHLLSHESLRIRVKALDVLSLGLPLLATYHNLLLPLVHQTWPSVIECLLCKDPLIVQRAFSCIEQMGKYSGDFVA 883 (1014)
T ss_pred HHHHHHHHhcchhHHHHHHHHHHHHhccHHHhccchhHhHHHHhhhhHHHHHHhcCchHHHHHHHHHHHHHHHHhhhHHH
Confidence 333444577888889999888877765544322 222 245677777788899999999999999999998875
Q ss_pred hhHHhhHHHHHhhhc
Q psy14014 579 NVIQSQVKPALDKLN 593 (615)
Q Consensus 579 ~~~~~~~~~~l~~l~ 593 (615)
..+.+.+.|-++.+.
T Consensus 884 sR~l~dvlP~l~~~~ 898 (1014)
T KOG4524|consen 884 SRFLEDVLPWLKHLC 898 (1014)
T ss_pred HHHHHHHHHHHHHHH
Confidence 455566666666553
No 388
>KOG4151|consensus
Probab=20.16 E-value=1.1e+03 Score=26.09 Aligned_cols=31 Identities=16% Similarity=0.288 Sum_probs=22.1
Q ss_pred HhhhHHHHHHhhccCchhHHHHHHHHHHHHH
Q psy14014 204 KTDIIPMFVNLAQDEQDSVRLLAVEACVSIA 234 (615)
Q Consensus 204 ~~~ll~~l~~~~~d~~~~vr~~a~~~l~~l~ 234 (615)
.+.-++.+.+++.++++..+.++++.+..+.
T Consensus 582 ke~~~~~ie~~~~ee~~~lqraa~e~~~NLl 612 (748)
T KOG4151|consen 582 KEKALGKIEELMTEENPALQRAALESIINLL 612 (748)
T ss_pred HHhcchhhHHHhhcccHHHHHHHHHHHHHHH
Confidence 3444555666677888888888888887764
Done!