RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14014
(615 letters)
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein
phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId:
9606]}
Length = 588
Score = 438 bits (1127), Expect = e-148
Identities = 468/611 (76%), Positives = 524/611 (85%), Gaps = 25/611 (4%)
Query: 2 ASSDSAPDDSLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETI 61
A++D DDSLYPIAVLIDEL+NEDVQLRLNSIKKLSTIALALG ERTR EL+PFLT+TI
Sbjct: 1 AAADG--DDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTI 58
Query: 62 YDEDEVLLALAEQLGTFTPNVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRLISAQH 121
YDEDEVLLALAEQLGTFT VGGPEYVHCLLPPLESLATVEETVVRDKAVESLR IS +H
Sbjct: 59 YDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEH 118
Query: 122 SPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQDDTP 181
SP DLEAHFVPLV+RLA GDWFTSRTSACGLFSVCYPRV++ VKAELR +FRNLC DDTP
Sbjct: 119 SPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTP 178
Query: 182 MVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSD 241
MVRRAAA KLGE AKV+E+D +K++IIPMF NLA DEQDSVRLLAVEACV+IA LL Q D
Sbjct: 179 MVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQED 238
Query: 242 VEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVR 301
+E LVMPTLRQ + D SWRVRYMVADKFT+LQKAVGPEITKTDLV AFQ L+KD EAEVR
Sbjct: 239 LEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVR 298
Query: 302 AAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKH 361
AAA++KV++FC+NL A +EN+IM+ ILP +K+LV+D NQHVKSALASVIMGLSPILGK
Sbjct: 299 AAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKD 358
Query: 362 NTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGV 421
NT++HLLPLFL+QLKDECPEVRLNIISNLDCVNEVIGI+Q
Sbjct: 359 NTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLS------------------ 400
Query: 422 EFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVY 481
+ +IVELAED+KWRVRLAIIEYMPLLAGQLGVEFFDEKLN+LCM WLVDHVY
Sbjct: 401 -----QSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVY 455
Query: 482 AIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTV 541
AIREAAT NLKKLVE+FG EWA +T+IPKV+AMS D NYLHRMT LFCINVL+E CG +
Sbjct: 456 AIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDI 515
Query: 542 TANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKLNGDTDVDVK 601
T +LPTVL MAGD VANVRFNVAK+LQKIGPIL+ + +QS+VKP L+KL D DVDVK
Sbjct: 516 TTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVK 575
Query: 602 YFAQEAISSIA 612
YFAQEA++ ++
Sbjct: 576 YFAQEALTVLS 586
Score = 72.5 bits (176), Expect = 6e-14
Identities = 37/201 (18%), Positives = 69/201 (34%), Gaps = 1/201 (0%)
Query: 76 GTFTPNVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQ 135
+G + LLP + LA + VR +E + L++ Q + L
Sbjct: 388 DCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCM 447
Query: 136 RLASGDWFTSRTSACGLFSVCYPRV-TAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGEL 194
+ R +A + A + + D + R + L
Sbjct: 448 AWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVL 507
Query: 195 AKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCS 254
++V D ++P + +A D +VR ++ I +L S ++ V P L + +
Sbjct: 508 SEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLT 567
Query: 255 GDTSWRVRYMVADKFTDLQKA 275
D V+Y + T L A
Sbjct: 568 QDQDVDVKYFAQEALTVLSLA 588
Score = 50.9 bits (120), Expect = 3e-07
Identities = 22/138 (15%), Positives = 48/138 (34%), Gaps = 1/138 (0%)
Query: 476 LVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAE 535
L + +R + L + G E +S ++P + D++ + +
Sbjct: 19 LRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDE-VLLALAEQLGTFTT 77
Query: 536 ACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKLNGD 595
G + LLP + ++A VR ++L+ I + +++ P + +L G
Sbjct: 78 LVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGG 137
Query: 596 TDVDVKYFAQEAISSIAD 613
+ A S
Sbjct: 138 DWFTSRTSACGLFSVCYP 155
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId:
9606]}
Length = 458
Score = 71.4 bits (173), Expect = 1e-13
Identities = 52/399 (13%), Positives = 121/399 (30%), Gaps = 47/399 (11%)
Query: 204 KTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQC--SGDTSWRV 261
+ ++ + E + + IA + ++P L + +++ +
Sbjct: 87 RREVKNYVLQTLGTETYRPSSAS-QCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHM 145
Query: 262 RYMVADKFTDLQKAVGPEITKTDLVQAFQMLLK-----DSEAEVRAAAANKVRDFCQNLD 316
+ + + + + PE + + +++ + V+ AA N + + +
Sbjct: 146 KESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTK 205
Query: 317 AYNQENIIMTYILPYVKDLVADPNQHVKSALASVI---MGLSPILGKHNTVDHLLPLFLS 373
A + +I+ V + P+ V+ A + M L + L + +
Sbjct: 206 ANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIE 265
Query: 374 QLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSI 433
+K + EV L I + E D + A
Sbjct: 266 AMKSDIDEVALQGIEFW--------------------------SNVCDEEMDLAIEASEA 299
Query: 434 VELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKK 493
E + + + L L + D + +AA + L
Sbjct: 300 AEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQ------DENDDDDDWNPCKAAGVCLML 353
Query: 494 LVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVTANFL---LPTV 550
L + V+P + ++ ++ +R + + E P+ + +PT+
Sbjct: 354 LATCCEDDIVP-HVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTL 412
Query: 551 LNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPAL 589
+ + D VR A T+ +I +L I L
Sbjct: 413 IELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPL 451
Score = 44.8 bits (104), Expect = 2e-05
Identities = 48/386 (12%), Positives = 114/386 (29%), Gaps = 27/386 (6%)
Query: 8 PDDSLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETI---YDE 64
++ + + + + ++ + ++ IA A ELIP L +
Sbjct: 83 DANARREVKNYVLQTLGTETYRPSSASQCVAGIACAEIPVNQWPELIPQLVANVTNPNST 142
Query: 65 DEVLLALAEQLGTFTPNVGGPEYVHCLLPPLES-----LATVEETVVRDKAVE----SLR 115
+ + + E +G ++ + L + V+ A SL
Sbjct: 143 EHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLE 202
Query: 116 LISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLF----SVCYPRVTAGVKAELRSH 171
A + +V R +A S+ Y + + L +
Sbjct: 203 FTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAI 262
Query: 172 FRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACV 231
+ D V + ++ + + + + A A
Sbjct: 263 TIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASE---AAEQGRPPEHTSKFYAKGALQ 319
Query: 232 SIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQM 291
+ +L+Q+ +Q + D W L +I ++ +
Sbjct: 320 YLVPILTQTLTKQD------ENDDDDDWNPCKAAGVCLMLLATCCEDDIVPH-VLPFIKE 372
Query: 292 LLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVI 351
+K+ + R AA + + + +++ +P + +L+ DP+ V+ A +
Sbjct: 373 HIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQ-AMPTLIELMKDPSVVVRDTAAWTV 431
Query: 352 MGLSPILGKHNTVDHLLPLFLSQLKD 377
+ +L + D L L L +
Sbjct: 432 GRICELLPEAAINDVYLAPLLQCLIE 457
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 888
Score = 68.2 bits (165), Expect = 2e-12
Identities = 57/404 (14%), Positives = 129/404 (31%), Gaps = 21/404 (5%)
Query: 204 KTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRY 263
I +N D +R +IAS + L +P L +
Sbjct: 86 TDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDL-LPKLCSLLDSEDYNTCE 144
Query: 264 MVADKFTDLQKAVGPEITK-------TDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLD 316
+ + + ++ F K S ++R+ A V F +
Sbjct: 145 GAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISR- 203
Query: 317 AYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKH--NTVDHLLPLFLSQ 374
+ + + L D V+ + ++ L + + +++ L +
Sbjct: 204 -TQALMLHIDSFTENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQR 262
Query: 375 LKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIV 434
+D+ V L + E + VR + + +P+L + D L +
Sbjct: 263 TQDQDENVALEACEFWLTLAEQPICKDVLVR-HLPKLIPVLVNGMKYSDIDIILLKGDVE 321
Query: 435 ELAE----DSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLN 490
E + R R + + G+E D+ + + + +R+ +
Sbjct: 322 EDETIPDSEQDIRPRFHRSRTVAQQHDEDGIEEEDDDDDEI-DDDDTISDWNLRKCSAAA 380
Query: 491 LKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVTANF--LLP 548
L L + E ++P + + ++ + + + + +AE C + L+P
Sbjct: 381 LDVLANVYRDELLP-HILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIP 439
Query: 549 TVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKL 592
++ D A VR TL + + + + +KP + +L
Sbjct: 440 HLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTEL 483
Score = 50.5 bits (119), Expect = 5e-07
Identities = 53/336 (15%), Positives = 101/336 (30%), Gaps = 33/336 (9%)
Query: 129 HFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQDDTPMVRRAAA 188
+ + S G + + EL H D +VR
Sbjct: 398 PLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITC 457
Query: 189 GKLGELAKVV---EVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQL 245
L A V D ++ + D V+ A A ++ V L
Sbjct: 458 WTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYL 517
Query: 246 --VMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAA 303
++ TL + ++ D L +VG + K + +Q L ++
Sbjct: 518 AYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDE 577
Query: 304 AANKVRDF-CQNLDAYNQENIIMTYILPYVKDLVADPNQHVK------------------ 344
+ C + A ++ + Y P + V + +
Sbjct: 578 DKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKD 637
Query: 345 ------SALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIG 398
L+ + GL + + ++L L ++D+ PEVR + + L + +
Sbjct: 638 FMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACF 697
Query: 399 IQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIV 434
V+ I ++MP+L L EF NA +
Sbjct: 698 QH---VKPCIADFMPILGTNLNPEFISVCNNATWAI 730
Score = 50.5 bits (119), Expect = 6e-07
Identities = 65/530 (12%), Positives = 148/530 (27%), Gaps = 52/530 (9%)
Query: 102 EETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVT 161
++R + I+++ + L L S D+ T + L +C
Sbjct: 100 SSPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKIC----- 154
Query: 162 AGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDS 221
E+ +D +IP F+ +
Sbjct: 155 ---------------------------EDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPK 187
Query: 222 VRLLAVEACVSIASLLSQSDVEQL--VMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPE 279
+R AV +Q+ + + L +GD VR V V +
Sbjct: 188 IRSHAVACVNQFIISRTQALMLHIDSFTENLFALAGDEEPEVRKNVCRALVM-LLEVRMD 246
Query: 280 ITKTDLVQAFQML---LKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLV 336
+ + + +D + V A + + + ++P + + +
Sbjct: 247 RLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGM 306
Query: 337 ADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEV 396
+ + V + + + + + + + D +++
Sbjct: 307 KYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRS-RTVAQQHDEDGIEEEDDDDDEIDDD 365
Query: 397 IGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRV-RLAIIEYMPLL 455
I W +R + +LA E L L + + + + ++ +
Sbjct: 366 DTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEG 425
Query: 456 AGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSE---WAQSTVIPKVV 512
Q + + E + L L D +R L + S+ ++ +++
Sbjct: 426 CMQGMIPYLPELIPHLIQ-CLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELL 484
Query: 513 AMSRDQNYLHRMTCLFCINVLAEACGPTVTANF--LLPTVLNMAGDNVANVRFNVAKTLQ 570
D N + L E + +L T++ + +
Sbjct: 485 KRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIG 544
Query: 571 KIGP-----ILETNVIQSQVKPALDKLNGDTDVDVKYF-AQEAISSIADS 614
+ + + IQ + P + K N D D F E +SS+A +
Sbjct: 545 TLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATA 594
Score = 46.6 bits (109), Expect = 8e-06
Identities = 56/411 (13%), Positives = 120/411 (29%), Gaps = 36/411 (8%)
Query: 25 EDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDEDEVLLALAEQLGTFTPNVGG 84
+D++ R + + ++ G E + + + + A L
Sbjct: 331 QDIRPRFHRSRTVAQQHDEDGIEEEDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRD 390
Query: 85 P--EYVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDW 142
++ LL L + ++ Q L L+Q L+
Sbjct: 391 ELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKA 450
Query: 143 FTSRTSACGLFSVCY---PRVTAGVKAELRSHFRNLCQDDTPMVRRA---AAGKLGELAK 196
+ L + + L + D V+ A A L E A
Sbjct: 451 LVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEAC 510
Query: 197 VVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEA----CVSIASLLSQSDVEQLVMPTLRQ 252
V YL I+ V Q L+ +A S+ L++ + Q++MP L Q
Sbjct: 511 TELVPYLA-YILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQ 569
Query: 253 ---------------------CSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQM 291
+ + V + + L A
Sbjct: 570 KWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPD 629
Query: 292 LLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVI 351
+ + + A + + + L ++ + + IL + + D V+ + +++
Sbjct: 630 QYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALL 689
Query: 352 MGLSPILGKHNT--VDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQ 400
L+ +H + +P+ + L E V N + ++ +GI+
Sbjct: 690 GDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIE 740
Score = 32.7 bits (73), Expect = 0.14
Identities = 19/118 (16%), Positives = 41/118 (34%), Gaps = 12/118 (10%)
Query: 278 PEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVA 337
P + + DS +RA + + N ++ LP + L+
Sbjct: 82 PNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDL-----LPKLCSLLD 136
Query: 338 DPNQHVK----SALASVIMGLSPILGKHNT---VDHLLPLFLSQLKDECPEVRLNIIS 388
+ + AL + + IL ++ ++P FL K P++R + ++
Sbjct: 137 SEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVA 194
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter
vinelandii [TaxId: 354]}
Length = 233
Score = 62.1 bits (150), Expect = 2e-11
Identities = 40/223 (17%), Positives = 68/223 (30%), Gaps = 66/223 (29%)
Query: 173 RNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVS 232
L +D +VRRA A +L L DE VR+ +
Sbjct: 72 TPLIRDSDEVVRRAVAYRLPR---------------EQLSALMFDEDREVRITVAD---- 112
Query: 233 IASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQML 292
+L + L Q + D + VR V +
Sbjct: 113 -----------RLPLEQLEQMAADRDYLVRAYVVQRIP---------------PGRLFRF 146
Query: 293 LKDSEAEVRAAAANK-----VRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSAL 347
++D + +VR A + + Q+ + + + + +L+ DP+ V+ A
Sbjct: 147 MRDEDRQVRKLVAKRLPEESLGLMTQDPEPEVRRIVASRLRGDDLLELLHDPDWTVRLAA 206
Query: 348 ASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNL 390
+H L +L + PEVRL I L
Sbjct: 207 V----------------EHASLEALRELDEPDPEVRLAIAGRL 233
Score = 49.0 bits (116), Expect = 5e-07
Identities = 44/257 (17%), Positives = 81/257 (31%), Gaps = 67/257 (26%)
Query: 255 GDTSWRVRYM-VADKFTDLQKAVGPE------------ITKTDLVQAFQMLLKDSEAEVR 301
GD V D+F + + + V+A L++DS+ VR
Sbjct: 24 GDACVAVESGRQIDRFFRNNPHLAVQYLADPFWERRAIAVRYSPVEALTPLIRDSDEVVR 83
Query: 302 AAAANKV-RDFCQNL----DAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSP 356
A A ++ R+ L D + + L ++ + AD + V++ +
Sbjct: 84 RAVAYRLPREQLSALMFDEDREVRITVADRLPLEQLEQMAADRDYLVRAYVV-------- 135
Query: 357 ILGKHNTVDHLLPLFLSQLKDECPEVRLNIISN--LDCVNEVIGIQQWRVRLAIIEYMPL 414
L F+ +DE +VR + + + + + VR + +
Sbjct: 136 ----QRIPPGRLFRFM---RDEDRQVRKLVAKRLPEESLGLMTQDPEPEVRRIVASRLRG 188
Query: 415 LAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMT 474
++EL D W VRLA +E+ L A +
Sbjct: 189 DD----------------LLELLHDPDWTVRLAAVEHASLEA----------------LR 216
Query: 475 WLVDHVYAIREAATLNL 491
L + +R A L
Sbjct: 217 ELDEPDPEVRLAIAGRL 233
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment
{Human (Homo sapiens) [TaxId: 9606]}
Length = 579
Score = 59.8 bits (144), Expect = 5e-10
Identities = 46/366 (12%), Positives = 112/366 (30%), Gaps = 35/366 (9%)
Query: 207 IIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVA 266
+ FV +D +R LAV I + + + LR+C D VR A
Sbjct: 84 AVNSFVKDCEDPNPLIRALAVRTMGCIRV----DKITEYLCEPLRKCLKDEDPYVRKTAA 139
Query: 267 DKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMT 326
L + + + + L+ DS V A A + + ++ N ++
Sbjct: 140 VCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQ 199
Query: 327 YILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNI 386
+ + + + + + + + +P + +L V L+
Sbjct: 200 -NINKLLTALNECTEWGQIFILDCLSNYNP--KDDREAQSICERVTPRLSHANSAVVLSA 256
Query: 387 ISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRL 446
+ L E++ + + + P L L + V+
Sbjct: 257 VKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLL-------------------SGEPEVQY 297
Query: 447 AIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQST 506
+ + L+ + E +++ + ++ + +L S+ +
Sbjct: 298 VALRNINLIVQKRP-EILKQEIK--VFFVKYNDPIYVKLEKLDIMIRLA----SQANIAQ 350
Query: 507 VIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVA 566
V+ ++ + + + + I A +A + T+L++ V V
Sbjct: 351 VLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQ--SAERCVSTLLDLIQTKVNYVVQEAI 408
Query: 567 KTLQKI 572
++ I
Sbjct: 409 VVIRDI 414
Score = 51.3 bits (122), Expect = 2e-07
Identities = 51/388 (13%), Positives = 116/388 (29%), Gaps = 27/388 (6%)
Query: 15 IAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRG--ELIPFLTETIYDEDEVLLALA 72
I L EL NE + R ++KK+ A+ +G++ + +++ + + +++
Sbjct: 12 IFELKAELNNEKKEKRKEAVKKV-IAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYL 70
Query: 73 EQLGTFTPNVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVP 132
P++ V+ + E ++R A +R + E P
Sbjct: 71 MNYAKSQPDM-AIMAVNSFVKDCED----PNPLIRALA---VRTMGCIRVDKITEYLCEP 122
Query: 133 LVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQDDTPMVRRAAAGKLG 192
L + L D + +T+A + + R+L D PMV A L
Sbjct: 123 LRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALS 182
Query: 193 ELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVE-QLVMPTLR 251
E+++ L L + + +++ + D E Q + +
Sbjct: 183 EISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVT 242
Query: 252 QCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQ----AFQMLLKDSEAEVRAAAANK 307
+ V + + + +++ + L E EV+ A
Sbjct: 243 PRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRN 302
Query: 308 VRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHL 367
+ Q ++ I + ++ DP L + L + +
Sbjct: 303 INLIVQKRPEILKQEIKVFFVKY------NDPIYVKLEKLD-----IMIRLASQANIAQV 351
Query: 368 LPLFLSQLKDECPEVRLNIISNLDCVNE 395
L + + + +
Sbjct: 352 LAELKEYATEVDVDFVRKAVRAIGRCAI 379
Score = 50.5 bits (120), Expect = 4e-07
Identities = 48/432 (11%), Positives = 124/432 (28%), Gaps = 63/432 (14%)
Query: 1 MASSDSAPDDSLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTET 60
M + S PD ++ + + + ++ + +R +++ + I + ++ +L E
Sbjct: 71 MNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVD--------KITEYLCEP 122
Query: 61 I-----YDEDEVLLALAEQLGTFTPNVGGPEYVHCLLPPLESLATVEETVVRDKAVESLR 115
+ ++ V A + L L L +V AV +L
Sbjct: 123 LRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALS 182
Query: 116 LISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSV--CYPRVTAGVKAELRSHFR 173
IS H +L + +L + + + Y +
Sbjct: 183 EISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVT 242
Query: 174 NLCQDDTPMVRRAAAGKLGELAKVVEVDY-LKTDIIPMFVNLAQDEQDSVRLLAVEACVS 232
V +A L + +++ D ++ + A +
Sbjct: 243 PRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRN 302
Query: 233 IASLLSQS-DVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQM 291
I ++ + ++ + + D + + D+ + + ++ +
Sbjct: 303 INLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKL-----DIMIRLASQANIAQVLAELKE 357
Query: 292 LLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVI 351
+ + + A + ++ + + + DL+ +V VI
Sbjct: 358 YATEVDVDFVRKAVRAIGRCAIKVEQSAE------RCVSTLLDLIQTKVNYVVQEAIVVI 411
Query: 352 MGLSP-------------------------------ILGKH----NTVDHLLPLFLSQLK 376
+ I+G++ + D LL FL
Sbjct: 412 RDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFH 471
Query: 377 DECPEVRLNIIS 388
DE +V+L +++
Sbjct: 472 DESTQVQLTLLT 483
Score = 42.1 bits (98), Expect = 2e-04
Identities = 33/168 (19%), Positives = 65/168 (38%), Gaps = 10/168 (5%)
Query: 81 NVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASG 140
+ + +L L+ AT + KAV ++ A E L+ + +
Sbjct: 341 RLASQANIAQVLAELKEYATEVDVDFVRKAVRAIG-RCAIKVEQSAERCVSTLLDLIQTK 399
Query: 141 DWFTSRTSACGLFSVC--YPRVTAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVV 198
+ + + + + YP + A L + +L D P R A +GE A+ +
Sbjct: 400 VNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSL---DEPDARAAMIWIVGEYAERI 456
Query: 199 EVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLV 246
+ +++ F+ DE V+L + A V + L S+ ++LV
Sbjct: 457 D---NADELLESFLEGFHDESTQVQLTLLTAIVKL-FLKKPSETQELV 500
Score = 28.2 bits (62), Expect = 3.6
Identities = 36/170 (21%), Positives = 59/170 (34%), Gaps = 27/170 (15%)
Query: 465 DEKLNALC-----------MTWLVDHVYAIREAATLNLKKLVEQFGSEWAQST------V 507
+++ A+ ++ L V + L LKKLV + +A+S
Sbjct: 25 EKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMA 84
Query: 508 IPKVVAMSRDQNYLHR---MTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFN 564
+ V D N L R + + CI V +L + D VR
Sbjct: 85 VNSFVKDCEDPNPLIRALAVRTMGCIRV-------DKITEYLCEPLRKCLKDEDPYVRKT 137
Query: 565 VAKTLQKIGPILETNVIQSQVKPALDKLNGDTDVDVKYFAQEAISSIADS 614
A + K+ I V +L L D++ V A A+S I++S
Sbjct: 138 AAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISES 187
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 861
Score = 58.7 bits (140), Expect = 1e-09
Identities = 60/478 (12%), Positives = 144/478 (30%), Gaps = 56/478 (11%)
Query: 95 LESLATVEETVVRDKAVESLRLISAQHSP-------HDLEAHFVPLVQRLASGDWFTSRT 147
LE+ + +R + L+ +S + L L R+ + +
Sbjct: 10 LENSILSPDQNIRLTSETQLKKLSNDNFLQFAGLSSQVLIDENTKLEGRILAALTLKNEL 69
Query: 148 SAC------GLFSVCYPRVTAGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVD 201
+ +V+ K +++++ P + AAA + +A +
Sbjct: 70 VSKDSVKTQQFAQRWITQVSPEAKNQIKTNALTALVSIEPRIANAAAQLIAAIADIELPH 129
Query: 202 YLKTDIIP-MFVNLAQDEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQCSGDTSWR 260
+++ M N ++ ++V+ ++ A +
Sbjct: 130 GAWPELMKIMVDNTGAEQPENVKRASLLALGYM--------------------------- 162
Query: 261 VRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQ 320
+ +A+ + ++ VR AA N + D + +
Sbjct: 163 -----CESADPQSQALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNME 217
Query: 321 ENIIMTYILPYVKDLVADPNQHVKSALASVI---MGLSPILGKHNTVDHLLPLFLSQLKD 377
Y++ V + + V++A + M K L L ++ +K
Sbjct: 218 REGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKS 277
Query: 378 ECPEVRLNIISNLDCVNEV---IGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIV 434
+V + + E I + + + ++ + +
Sbjct: 278 PNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQN 337
Query: 435 ELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKL 494
E ED W V ++ + L A G + L + + REAA + +
Sbjct: 338 EDPEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNI-TADNWRNREAAVMAFGSI 396
Query: 495 VEQFGSEWAQ---STVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPT 549
++ +P ++ + DQ+ + T +CI +A++ ++ LP
Sbjct: 397 MDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHLPG 454
Score = 51.0 bits (120), Expect = 4e-07
Identities = 53/480 (11%), Positives = 136/480 (28%), Gaps = 44/480 (9%)
Query: 166 AELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLL 225
AE N +R + +L +L+ + + + V + ++ + R+L
Sbjct: 4 AEFAQLLENSILSPDQNIRLTSETQLKKLSNDNFLQFA---GLSSQVLIDENTKLEGRIL 60
Query: 226 AV----------------EACVSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKF 269
A + + +S Q + R+ A
Sbjct: 61 AALTLKNELVSKDSVKTQQFAQRWITQVSPEAKNQ-IKTNALTALVSIEPRIANAAAQLI 119
Query: 270 TDLQKAVGPEITKTDLVQA-FQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQE-----NI 323
+ P +L++ + V+ A+ + C++ D +Q N
Sbjct: 120 AAIADIELPHGAWPELMKIMVDNTGAEQPENVKRASLLALGYMCESADPQSQALVSSSNN 179
Query: 324 IMTYILPYVKDLVADPNQHVKSA--LASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPE 381
I+ I+ + + + LA ++ + + + ++L+ + + E E
Sbjct: 180 ILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEATQAEDIE 239
Query: 382 VRLNIISNL------------DCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLN 429
V+ L + + + + + + + + +E+++
Sbjct: 240 VQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEID 299
Query: 430 ALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATL 489
+ S + + + + L + D ++ A L
Sbjct: 300 IAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQN----EDPEDDDWNVSMSAGACL 355
Query: 490 NLKKLVEQFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPT 549
L + + + +N + I + T + LP+
Sbjct: 356 QLFAQNCGNHILEPVLEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPS 415
Query: 550 VLNMAGDNVANVRFNVAKTLQKIGPILETNVIQSQVKPALDKLNGDTDVDVKYFAQEAIS 609
+LN+ D V+ A + +I + ++ Q P + + D A
Sbjct: 416 ILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQDHPKVATNCSW 475
Score = 43.7 bits (101), Expect = 6e-05
Identities = 73/630 (11%), Positives = 170/630 (26%), Gaps = 48/630 (7%)
Query: 18 LIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDED---------EVL 68
+ L + + ++ + + ++ IA EL+ + + E L
Sbjct: 100 ALTALVSIEPRIANAAAQLIAAIADIELPHGAWPELMKIMVDNTGAEQPENVKRASLLAL 159
Query: 69 LALAEQLGTFTPNVGGPEYVHCLLPPLESLATVEETVVRDKAVE----SLRLISAQHSPH 124
+ E + + + + +T VR A+ SL I
Sbjct: 160 GYMCESADPQSQALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMERE 219
Query: 125 DLEAHFVPLVQRLASGDWFTSRTSACGLF----SVCYPRVTAGVKAELRSHFRNLCQDDT 180
+ + +V + + +A G S Y + ++ L + +
Sbjct: 220 GERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPN 279
Query: 181 PMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQS 240
V + + DI Q S + +LL+
Sbjct: 280 DKVASMTVEFWSTICEEEI------DIAYELAQFPQSPLQSYNFALSSIKDVVPNLLN-- 331
Query: 241 DVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEV 300
++ + D W V + G I + ++ + +
Sbjct: 332 -----LLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILEPV-LEFVEQNITADNWRN 385
Query: 301 RAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGK 360
R AA D + + LP + +L+ D + VK A I ++ + +
Sbjct: 386 REAAVMAFGSIMDGPDKVQRTY-YVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAE 444
Query: 361 HNTVDHLLPLF---LSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAG 417
LP + P+V N + + E + +
Sbjct: 445 SIDPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAEATPSPIYNFYPALVDGLI 504
Query: 418 QLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLV 477
+E S + E ++ + ++ + ++ +
Sbjct: 505 GAANRIDNEFNARASAFSALTTMVEYATDTVAETSASISTFV-MDKLGQTMSVDENQLTL 563
Query: 478 D---HVYAIREAATLNLKKLVEQFGSE---WAQSTVIPKVVAMSRDQNYLHRMTCLFCIN 531
+ + ++ L ++ + S A + + + + + I+
Sbjct: 564 EDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAIS 623
Query: 532 VLAEACGPTVTA--NFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILETNVIQS--QVKP 587
LA + G P +L + V + I LE + + +
Sbjct: 624 ALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMN 683
Query: 588 ALDKL--NGDTDVDVKYFAQEAISSIADSI 615
L ++ N + ++K IA +I
Sbjct: 684 VLAQMISNPNARRELKPAVLSVFGDIASNI 713
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein
1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Length = 1207
Score = 58.6 bits (140), Expect = 2e-09
Identities = 55/449 (12%), Positives = 128/449 (28%), Gaps = 50/449 (11%)
Query: 177 QDDTPMVRRAAAGKLGELAKVVEVDYLKTD------IIPMFVNLAQDEQDSVRLLAVEAC 230
R A +L ++ D +K D ++ M + L +D+ V+ LAV+
Sbjct: 13 TSSDKDFRFMA---TNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCL 69
Query: 231 VSIASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQA-- 288
+ S + + VE +V TL ++R + + + + P + + L
Sbjct: 70 GPLVSKVKEYQVETIV-DTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVC 128
Query: 289 -------FQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQ 341
+ K + V+ A + + D IL + + P
Sbjct: 129 KKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPS--ILTCLLPQLTSPRL 186
Query: 342 HVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQ 401
V+ + L G L+ LS+L
Sbjct: 187 AVRKRTIIALGHLVMSCGNI-VFVDLIEHLLSELSKN---------------------DS 224
Query: 402 WRVRLAIIEYMPLLAGQLGVEFFDEKLNALSI-VELAEDSKWRVRLAIIEYMPLLAGQLG 460
I+ + ++ Q G + + + V+ +R I+ +
Sbjct: 225 MSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCP 284
Query: 461 VEF--FDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQ 518
E + +C+ +L + + + G + Q + D
Sbjct: 285 KEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQ--GSDDEYSDDDDM 342
Query: 519 NYLHRMTCLFCINVLAEACGPTVTANF--LLPTVLNMAGDNVANVRFNVAKTLQKIGPIL 576
++ R C++ + + + + P +++ + NV+ +V +
Sbjct: 343 SWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPALISRFKEREENVKADVFHAYLSLLKQT 402
Query: 577 ETNVIQSQVKPALDKLNGDTDVDVKYFAQ 605
A+++ +
Sbjct: 403 RPVQSWLCDPDAMEQGETPLTMLQSQVPN 431
Score = 57.1 bits (136), Expect = 5e-09
Identities = 33/251 (13%), Positives = 77/251 (30%), Gaps = 18/251 (7%)
Query: 175 LCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSI- 233
L +D V+ A LG L V+ ++T I+ +++ +R ++ ++
Sbjct: 53 LLEDKNGEVQNLAVKCLGPLVSKVKEYQVET-IVDTLCTNMLSDKEQLRDISSIGLKTVI 111
Query: 234 --------ASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITK--T 283
S L+ + +++ + V+ D D+ G +
Sbjct: 112 GELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHP 171
Query: 284 DLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHV 343
++ L VR + +L + + I + +L + +
Sbjct: 172 SILTCLLPQLTSPRLAVRKRTIIAL----GHLVMSCGNIVFVDLIEHLLSELSKNDSMST 227
Query: 344 KSALASVIMGLSPILGKH--NTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQ 401
I +S G ++ ++PL + + E+R I + +
Sbjct: 228 TRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEV 287
Query: 402 WRVRLAIIEYM 412
+ II
Sbjct: 288 YPHVSTIINIC 298
Score = 52.1 bits (123), Expect = 2e-07
Identities = 62/519 (11%), Positives = 159/519 (30%), Gaps = 41/519 (7%)
Query: 109 KAVESLRLISAQHSPHDLEAHFVPLVQRLASGD-----WFTSRTSACGLFSVCYPRVTAG 163
K + L S+ + ++ F ++RL + D + + + + +
Sbjct: 545 KVIRPLDQPSSFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIICNLGDNLGSD 604
Query: 164 VKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVR 223
+ L+ L + T + A + +++ + + +P+ + + Q +++
Sbjct: 605 LPNTLQIFLERLKNEITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALK 664
Query: 224 LLAVEACVSIASLLSQS---DVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEI 280
L + A + S S + V+ L ++ V M T L K +
Sbjct: 665 LGTLSALDILIKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTLAKVYPSSL 724
Query: 281 TKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPN 340
+K +++ ++ A + + DF Q L N+ +L + V +
Sbjct: 725 SKISGSILNELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQS 784
Query: 341 QHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQ 400
H + + ++ L CP+ ++ +
Sbjct: 785 ----------------TALTHKQSYYSIAKCVAALTRACPKEGPAVVGQF-IQDVKNSRS 827
Query: 401 QWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLG 460
+RL + + + + + E + I+E V+ A + ++
Sbjct: 828 TDSIRLLALLSLGEVGHHIDLSGQLELKSV--ILEAFSSPSEEVKSAASYALGSISVGNL 885
Query: 461 VEFFDEKLNALCMTWLVDH--VYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAMSRDQ 518
E+ L + + +++++E + ++ + + ++
Sbjct: 886 PEYLPFVLQEITSQPKRQYLLLHSLKEIISSASVVGLKPY-----VENIWALLLKHCECA 940
Query: 519 NYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGPILET 578
R C+ L + LLP + + R +V ++
Sbjct: 941 EEGTRNVVAECLGKLT-----LIDPETLLPRLKGYLISGSSYARSSVVTAVKFTISDHPQ 995
Query: 579 NVIQ--SQVKPALDKLNGDTDVDVKYFAQEAISSIADSI 615
+ K D D++V+ A +S A +
Sbjct: 996 PIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAAHNK 1034
Score = 46.7 bits (109), Expect = 9e-06
Identities = 52/469 (11%), Positives = 125/469 (26%), Gaps = 55/469 (11%)
Query: 73 EQLGTFTPNVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHDLEAHFVP 132
+ + + +P L S + ++ + +L ++ +S A
Sbjct: 630 TLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDA 689
Query: 133 LVQRLASGDWFT------SRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQDD--TPMVR 184
++ L + S + YP + + + + L +
Sbjct: 690 VLDELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIGLVRSPLLQGGAL 749
Query: 185 RAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVR----LLAVEACVSIASLLSQS 240
A L + D++ M + ++ ++ CV+ +
Sbjct: 750 SAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPK 809
Query: 241 DVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEV 300
+ +V ++ S ++A + +L EV
Sbjct: 810 EGPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFSSPSEEV 869
Query: 301 RAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASV--IMGLSPIL 358
++AA+ + + LP+V + + L S+ I+ + ++
Sbjct: 870 KSAASYALGSISVG---------NLPEYLPFVLQEITSQPKRQYLLLHSLKEIISSASVV 920
Query: 359 GKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQ 418
G V+++ L L + R + L G+
Sbjct: 921 GLKPYVENIWALLLKHCECAEEGTRNVVAECL--------------------------GK 954
Query: 419 LGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFD--EKLNALCMTWL 476
L + + L L R +++ + + + L
Sbjct: 955 LTLIDPETLLPRL--KGYLISGSSYARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLKTL 1012
Query: 477 VDHVYAIREAATLNLKKLVEQFGSEWAQ--STVIPKVVAMSRDQNYLHR 523
D +R A + S TV+P + ++ + L R
Sbjct: 1013 EDPDLNVRRVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIR 1061
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 584
Score = 52.9 bits (126), Expect = 8e-08
Identities = 52/389 (13%), Positives = 122/389 (31%), Gaps = 20/389 (5%)
Query: 204 KTDIIPMFVNLAQ----DEQDSVRLLAVEACVSIASLLSQSDVEQLVMPTLRQC-SGDTS 258
+++I + N + + LA+ IA++ S+ E + +GDT
Sbjct: 97 NSELIRLINNAIKNDLASRNPTFMGLALHC---IANVGSREMAEAFAGEIPKILVAGDTM 153
Query: 259 WRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAY 318
V+ A L + + D LL D V AA + + Q
Sbjct: 154 DSVKQSAALCLLRLYRTSPDLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQ--KNP 211
Query: 319 NQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDE 378
+ ++ + + +V + ++ + + + P ++
Sbjct: 212 EEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDPAVRGR 271
Query: 379 CPEVRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAE 438
E I++ + +Q + A++ L E + + +
Sbjct: 272 LTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHHDSEPNLLVRACNQLGQFLQ 331
Query: 439 DSKWRVRLAIIEYMPLLAGQLGV-EFFDEKLNALCMTWLV-DHVYAIREAATLNLKKLVE 496
+ +R +E M LA E + + V + A L L +
Sbjct: 332 HRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDL-LYAMC- 389
Query: 497 QFGSEWAQSTVIPKVVAMSRDQNYLHRMTCLFCINVLAEACGPTVTANF-LLPTVLNMAG 555
++ ++++ +Y R + + +LAE T + ++ +AG
Sbjct: 390 ---DRSNAQQIVAEMLSYLETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAG 446
Query: 556 DNVAN-VRFNVAKTLQKIGPILETNVIQS 583
D V+ V + V + + ++ ++
Sbjct: 447 DYVSEEVWYRVIQIVINR-DDVQGYAAKT 474
Score = 37.8 bits (87), Expect = 0.003
Identities = 32/240 (13%), Positives = 77/240 (32%), Gaps = 27/240 (11%)
Query: 13 YPIAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDEDEVLLALA 72
++V + L +++ T L + + + ++ VL
Sbjct: 247 PWLSVKLLRLLQCYPPPEDPAVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAI 306
Query: 73 EQLGTFTPNVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRLISAQHSPHD-LEAHFV 131
+ P + L ET +R A+ES+ +++ H+ ++ H
Sbjct: 307 SLIIHHDSE---PNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIE 363
Query: 132 PLVQRLASGD-WFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQDDTPMVRRAAAGK 190
++ L + + + L+++C + AE+ S+ + +R K
Sbjct: 364 TVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSY----LETADYSIREEIVLK 419
Query: 191 LGELA--------KVVEV---------DYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSI 233
+ LA V+ DY+ ++ + + +D V+ A +
Sbjct: 420 VAILAEKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVI-NRDDVQGYAAKTVFEA 478
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli
[TaxId: 562]}
Length = 276
Score = 42.9 bits (99), Expect = 5e-05
Identities = 33/230 (14%), Positives = 56/230 (24%), Gaps = 27/230 (11%)
Query: 174 NLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSI 233
L D + R ++A L D + + + D+ R + I
Sbjct: 26 RLLDDHNSLKRISSARVLQLRG--------GQDAVRLAIEFCSDKNYIRRDIGAFILGQI 77
Query: 234 ASLLSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLL 293
D + D S VR + K I +V+ Q+
Sbjct: 78 KICKKCED--NVFNILNNMALNDKSACVRATAIESTAQRCK--KNPIYSPKIVEQSQITA 133
Query: 294 KDSEAEVRAAAAN-------------KVRDFCQNLDAYNQENIIMTYILPYVKDLVADPN 340
D VR A A + I Y + D
Sbjct: 134 FDKSTNVRRATAFAISVINDKATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCF 193
Query: 341 QHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNL 390
+ + + I + +L + +LK V +II
Sbjct: 194 VEMLQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKK--NTVYDDIIEAA 241
Score = 34.8 bits (78), Expect = 0.026
Identities = 25/275 (9%), Positives = 66/275 (24%), Gaps = 29/275 (10%)
Query: 335 LVADPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLDCVN 394
L+ D N + + A V+ + L + D+ R L +
Sbjct: 27 LLDDHNSLKRISSARVLQLRGG--------QDAVRLAIEFCSDKNYIRRDIGAFILGQIK 78
Query: 395 EVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMPL 454
+ + + + +E + + + +
Sbjct: 79 ICKKCEDNVFNILNNMALND----------KSACVRATAIESTAQRCKKNPIYSPKIVEQ 128
Query: 455 LAGQLGVEFFDEKLNALCMTWLVDHVYAIREAATLNLKKLVEQFGSEWAQSTVIPKVVAM 514
+ + + +++ I L + + +
Sbjct: 129 SQITAFDKSTNVRRATAFAISVINDKATIPLLINLLKDPNGDVRNWAAFAININKYDNSD 188
Query: 515 SRDQNYLHRMTCLFCINVLAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKIGP 574
RD + + A +L + + N V ++ + ++G
Sbjct: 189 IRDCFVEMLQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKN--TVYDDIIEAAGELG- 245
Query: 575 ILETNVIQSQVKPALDK-LNGDTDVDVKYFAQEAI 608
+ P LD L D ++ A + +
Sbjct: 246 -------DKTLLPVLDTMLYKFDDNEIITSAIDKL 273
Score = 27.9 bits (60), Expect = 3.1
Identities = 26/232 (11%), Positives = 53/232 (22%), Gaps = 28/232 (12%)
Query: 15 IAVLIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDEDEVLLALAEQ 74
+ + I+ +++ R L I + E L ++ +
Sbjct: 52 VRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNV---FNILNNMALNDKSACVRATAI 108
Query: 75 LGTFTPNVGGPEYVHCLLPPLESLATVEETVVRDKAVESL------RLISAQHSPHDLEA 128
T P Y ++ + A + T VR ++ I +
Sbjct: 109 ESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVINDKATIPLLINLLKDPN 168
Query: 129 HFVPLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRSHFRNLCQD---------- 178
V A + F V+ E
Sbjct: 169 GDVRNWAAFAININKYDNSDIRDCFVEMLQDKNEEVRIEAIIGLSYRKDKRVLSVLCDEL 228
Query: 179 DTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDS-VRLLAVEA 229
V GEL ++P+ + D+ + A++
Sbjct: 229 KKNTVYDDIIEAAGELG--------DKTLLPVLDTMLYKFDDNEIITSAIDK 272
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 111
Score = 38.4 bits (88), Expect = 3e-04
Identities = 20/130 (15%), Positives = 39/130 (30%), Gaps = 25/130 (19%)
Query: 177 QDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASL 236
D+ VRR + L + + + +E +R A
Sbjct: 2 ADENKWVRRDVSTALSRMGD---------EAFEPLLESLSNEDWRIRGAAAWII------ 46
Query: 237 LSQSDVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDS 296
+ ++ + L + D S VR A +++ +I + A + L +
Sbjct: 47 --GNFQDERAVEPLIKLLEDDSGFVRSGAA-------RSLE-QIGGERVRAAMEKLAETG 96
Query: 297 EAEVRAAAAN 306
R A N
Sbjct: 97 TGFARKVAVN 106
Score = 33.4 bits (75), Expect = 0.017
Identities = 24/128 (18%), Positives = 42/128 (32%), Gaps = 24/128 (18%)
Query: 102 EETVVRDKAVESLRLISAQHSPHDLEAHFVPLVQRLASGDWFTSRTSACGLFSVCYPRVT 161
E VR +L + + PL++ L++ DW +A + + R
Sbjct: 4 ENKWVRRDVSTALSRMGDEAFE--------PLLESLSNEDWRIRGAAAWIIGNFQDERAV 55
Query: 162 AGVKAELRSHFRNLCQDDTPMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDS 221
L +DD+ VR AA L ++ ++ LA+
Sbjct: 56 E--------PLIKLLEDDSGFVRSGAARSLEQIGGERVRAAME--------KLAETGTGF 99
Query: 222 VRLLAVEA 229
R +AV
Sbjct: 100 ARKVAVNY 107
Score = 27.6 bits (60), Expect = 1.7
Identities = 12/114 (10%), Positives = 25/114 (21%), Gaps = 20/114 (17%)
Query: 293 LKDSEAEVRAAAA---------------NKVRDFCQNLDAYNQENIIMTYILPYVKDLVA 337
+ D VR + + + + I V+ L+
Sbjct: 1 MADENKWVRRDVSTALSRMGDEAFEPLLESLSNEDWRIRGAAAWIIGNFQDERAVEPLIK 60
Query: 338 DPNQHVKSALASVIMGLSPILGKHNTVDHLLPLFLSQLKDECPEVRLNIISNLD 391
+ L I G + L + R ++ L+
Sbjct: 61 LLEDDSGFVRSGAARSLEQI-GGERVRAAMEKL----AETGTGFARKVAVNYLE 109
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId:
9606]}
Length = 876
Score = 39.3 bits (90), Expect = 0.001
Identities = 55/400 (13%), Positives = 107/400 (26%), Gaps = 33/400 (8%)
Query: 18 LIDELKNEDVQLRLNSIKKLSTIALALGQERTRGELIPFLTETIYDEDE-------VLLA 70
++ L E ++ + ++ IA A ELIP L + + + L A
Sbjct: 95 VLHTLGTET-YRPSSASQCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEA 153
Query: 71 LAEQLGTFTPNVGGPEYVHCLLPPLESLATVEETVVRDKA------VESLRLISAQHSPH 124
+ P + +L + EE K + SL A
Sbjct: 154 IGYICQDIDPEQLQD-KSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKE 212
Query: 125 DLEAHFVPLVQRLASGDWFTSRTSACG----LFSVCYPRVTAGVKAELRSHFRNLCQDDT 180
+ +V R +A + S+ Y + + L + + D
Sbjct: 213 SERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDI 272
Query: 181 PMVRRAAAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLLAVEACVSIASLLSQS 240
V + D+ A+ + A ++ L+
Sbjct: 273 DEVALQGIEFWSNVCDEE------MDLAIEASEAAEQGRPPEHTSKFYAKGALQYLV--- 323
Query: 241 DVEQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEV 300
+ + + D W L +I L + +
Sbjct: 324 PILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYR 383
Query: 301 RAAAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGK 360
AA +Q ++ +P + +L+ DP+ V+ A + + +L +
Sbjct: 384 D--AAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPE 441
Query: 361 HNTVDHLLPLFLSQLK---DECPEVRLNIISNLDCVNEVI 397
D L L L P V N+ + E
Sbjct: 442 AAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAA 481
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId:
9606]}
Length = 529
Score = 36.8 bits (83), Expect = 0.007
Identities = 22/152 (14%), Positives = 46/152 (30%), Gaps = 21/152 (13%)
Query: 206 DIIPMFVNLAQDEQDSVRLLAVEACVSIASL--LSQSDVEQLVMPTLRQCSGDTSWRVRY 263
IP V L + + + ++ + L + D R+
Sbjct: 397 GAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIV- 455
Query: 264 MVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENI 323
I + + F LL ++ AA + + Q+ + E I
Sbjct: 456 ----------------IRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKE--AAEAI 497
Query: 324 IMTYILPYVKDLVADPNQHVKSALASVIMGLS 355
+ +L+ N+ V + A+V+ +S
Sbjct: 498 EAEGATAPLTELLHSRNEGVATYAAAVLFRMS 529
Score = 30.2 bits (66), Expect = 0.89
Identities = 16/102 (15%), Positives = 29/102 (28%), Gaps = 12/102 (11%)
Query: 174 NLCQDDTPMVRRAAAGKLGELAKVVEVDYL---KTDIIPMFVNLAQDEQDSVRLLAVEAC 230
L D+ +V AA + +L+K + ++ V Q+ D
Sbjct: 24 KLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVE---TARCT 80
Query: 231 VSIASLLSQSD------VEQLVMPTLRQCSGDTSWRVRYMVA 266
LS + +P L + G V +
Sbjct: 81 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAI 122
Score = 29.9 bits (65), Expect = 1.2
Identities = 13/63 (20%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Query: 174 NLCQDDTPMVRRAAAGKLGELAKVVE--VDYLKTDIIPMFVNLAQDEQDSVRLLAVEACV 231
L ++R AAG L ELA+ E L + V A
Sbjct: 467 QLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLF 526
Query: 232 SIA 234
++
Sbjct: 527 RMS 529
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId:
10090]}
Length = 434
Score = 30.9 bits (68), Expect = 0.47
Identities = 11/86 (12%), Positives = 29/86 (33%), Gaps = 4/86 (4%)
Query: 174 NLCQDDTPMVRRAAAGKLGELAKVVEVDYLKT----DIIPMFVNLAQDEQDSVRLLAVEA 229
+ ++ AA + V+ + II +NL + + + ++A
Sbjct: 321 GVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDA 380
Query: 230 CVSIASLLSQSDVEQLVMPTLRQCSG 255
+I + + + + +C G
Sbjct: 381 ISNIFQAAEKLGETEKLSIMIEECGG 406
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 457
Score = 29.8 bits (65), Expect = 1.1
Identities = 50/419 (11%), Positives = 103/419 (24%), Gaps = 41/419 (9%)
Query: 132 PLVQRLASGDWFTSRTSACGLFSVCYPRVTAGVKAELRS-----HFRNLCQDDTPMVRRA 186
VQ L+S D A + C+ K ++ +L + V++A
Sbjct: 6 KAVQYLSSQDEKYQAIGAYYIQHTCF--QDESAKQQVYQLGGICKLVDLLRSPNQNVQQA 63
Query: 187 AAGKLGELAKVVEVDYLKTDIIPMFVNLAQDEQDSVRLL----AVEACVSIASLLSQSDV 242
AAG L NL + + VS+ +++
Sbjct: 64 AAGALR--------------------NLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEI 103
Query: 243 EQLVMPTLRQCSGDTSWRVRYMVADKFTDLQKAVGPEITKTDLVQAFQMLLKDSEAEVRA 302
++ + L S + + + + P M + + EV
Sbjct: 104 QKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFS--GWCDGNSNMSREVVDPEVFF 161
Query: 303 AAANKVRDFCQNLDAYNQENIIMTYILPYVKDLVADPNQHVKSALASVIMGLSPILGKHN 362
A +R+ I + V + + SV + +
Sbjct: 162 NATGCLRNLSSADAGRQTMRNYSGLI-DSLMAYVQNCVAASRCDDKSVENCMCVLHNLSY 220
Query: 363 TVDHLLPLFLSQLKDECPE--VRLNIISNLDCVNEVIGIQQWRVRLAIIEYMPLLAGQLG 420
+D +P QL+ + ++ + + L E P +G L
Sbjct: 221 RLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLY 280
Query: 421 VEFFDEKLNAL----SIVELAEDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWL 476
L E ++ + +G + EK L
Sbjct: 281 HSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLL 340
Query: 477 VDHVYAIREAATLNLKKLVEQFGSEWA-QSTVIPKVVAMSRDQNYLHRMTCLFCINVLA 534
+ + L + + V P+V + + +
Sbjct: 341 QSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACY 399
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 959
Score = 29.1 bits (64), Expect = 2.1
Identities = 17/125 (13%), Positives = 44/125 (35%), Gaps = 14/125 (11%)
Query: 482 AIREAATLNLKKLVEQFGSEWAQSTVIP---------KVVAMSRDQNYLHRMTCLFCINV 532
+ R A L K +++ + + ++P ++V + ++ I+
Sbjct: 52 STRLAGALFFKNFIKRKWVDENGNHLLPANNVELIKKEIVPLMISLPNNLQVQIGEAISS 111
Query: 533 LAEACGPTVTANFLLPTVLNMAGDNVANVRFNVAKTLQKI----GPILETNVIQSQVKPA 588
+A++ P LL + + ++ V I P+ ++ + ++K
Sbjct: 112 IADSDFPDRWPT-LLSDLASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDELFLEIKLV 170
Query: 589 LDKLN 593
LD
Sbjct: 171 LDVFT 175
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 264
Score = 26.5 bits (57), Expect = 8.5
Identities = 34/229 (14%), Positives = 71/229 (31%), Gaps = 11/229 (4%)
Query: 279 EITKTDLVQAFQMLLKDSEAEVRAAAANKVRDFCQNLDAYNQENII-MTYILPYVKDLVA 337
+ + + ++ + R A + D C+N+D N + ++ + V +
Sbjct: 12 RVLSQPMPPTAGEAEQAADQQEREGALELLADLCENMD--NAADFCQLSGMHLLVGRYLE 69
Query: 338 DPNQHVKSALASVIMGLSPILGKHNTV---DHLLPLFLSQLKD-ECPEVRLNIISNLDCV 393
++ A +I S + L L L C VR+ + + C+
Sbjct: 70 AGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCL 129
Query: 394 NEVIGIQQWRVRLAIIEYMPLLAGQLGVEFFDEKLNALSIVELAEDSKWRVRLAIIEYMP 453
+ + + A Q V+ K L L + + L + +
Sbjct: 130 VREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQ 189
Query: 454 LLAGQLGVEFFDEKLNALCMTW--LVDHVYAIREA--ATLNLKKLVEQF 498
L + E + L + D +RE L L++L+
Sbjct: 190 QLVALVRTEHSPFHEHVLGALCSLVTDFPQGVRECREPELGLEELLRHR 238
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.135 0.388
Gapped
Lambda K H
0.267 0.0500 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,158,104
Number of extensions: 97790
Number of successful extensions: 329
Number of sequences better than 10.0: 1
Number of HSP's gapped: 233
Number of HSP's successfully gapped: 48
Length of query: 615
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 524
Effective length of database: 1,158,166
Effective search space: 606878984
Effective search space used: 606878984
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (25.9 bits)