Query psy14029
Match_columns 277
No_of_seqs 156 out of 385
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 17:49:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14029.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14029hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3flp_A SAP-like pentraxin; phy 99.7 6.6E-15 2.3E-19 125.4 18.3 163 80-256 9-185 (217)
2 3pvn_A C-reactive protein; pen 99.6 2.5E-14 8.4E-19 120.9 19.1 164 78-256 7-178 (206)
3 3kqr_A Serum amyloid P-compone 99.6 7.7E-14 2.6E-18 117.7 18.9 158 78-255 7-175 (204)
4 1a8d_A Tetanus neurotoxin; clo 99.5 1.6E-13 5.6E-18 124.7 16.2 172 78-258 58-247 (452)
5 2v73_A CBM40, putative EXO-alp 99.5 7.1E-12 2.4E-16 103.1 20.1 145 97-253 35-187 (191)
6 2nyy_A Botulinum neurotoxin ty 99.5 1.8E-12 6.1E-17 128.0 19.0 159 101-276 937-1103(1295)
7 4dqa_A Uncharacterized protein 99.5 1.9E-12 6.6E-17 117.9 18.2 135 100-254 159-303 (355)
8 3rsj_A BONT/F; clostridium bot 99.5 9.3E-12 3.2E-16 111.2 20.6 149 101-258 66-221 (413)
9 3v0a_B NTNH; botulinum neuroto 99.3 6.4E-11 2.2E-15 114.5 18.7 139 101-257 901-1039(1196)
10 1epw_A Bontoxilysin B, botulin 99.3 2.5E-11 8.5E-16 120.0 14.9 159 102-276 923-1090(1290)
11 2sli_A Intramolecular trans-si 99.2 2.9E-10 9.9E-15 111.6 18.7 176 80-267 12-205 (679)
12 2jkb_A Sialidase B; intramolec 99.2 2.1E-10 7.1E-15 112.7 15.9 174 80-267 37-226 (686)
13 2vu9_A Botulinum neurotoxin A 99.1 3.4E-09 1.2E-13 94.8 17.7 147 101-257 85-239 (444)
14 3n7l_A Neurotoxin; HCR/D-SA, g 99.0 5.9E-08 2E-12 86.0 19.5 147 101-257 70-228 (424)
15 3pme_A Type C neurotoxin; stru 98.9 3.1E-08 1.1E-12 87.6 15.9 144 101-256 66-217 (420)
16 3ffz_A Botulinum neurotoxin ty 98.9 1.9E-07 6.4E-12 92.4 20.8 160 101-277 912-1080(1252)
17 2vxr_A Botulinum neurotoxin ty 98.9 2.4E-08 8.3E-13 89.8 13.4 147 101-257 113-270 (482)
18 3vuo_A NTNHA; protection of bo 98.8 1.2E-07 4.1E-12 94.4 18.1 138 101-256 898-1035(1196)
19 1za4_A Thrombospondin 1; TSP-1 98.7 8.7E-07 3E-11 76.6 16.5 130 102-249 72-212 (251)
20 2erf_A Thrombospondin-1; TSP-1 98.6 3.3E-06 1.1E-10 71.0 17.3 130 102-249 62-202 (209)
21 1pz7_A Agrin; structural prote 98.6 1.8E-06 6.3E-11 72.0 15.3 149 80-245 15-187 (204)
22 3pve_A Agrin, AGRN protein; mR 98.5 3.8E-06 1.3E-10 69.3 15.6 150 78-244 10-172 (189)
23 3sh4_A LG3 peptide; actin disa 98.5 8.8E-06 3E-10 67.4 17.4 146 79-241 7-167 (195)
24 2h0b_A Neurexin-1-alpha; B-san 98.4 7E-06 2.4E-10 67.2 14.7 151 79-247 7-167 (184)
25 2r16_A Neurexin-1-alpha; beta- 98.4 4.3E-06 1.5E-10 68.5 13.2 146 78-244 6-159 (182)
26 3v64_A Low-density lipoprotein 98.4 9.6E-06 3.3E-10 67.0 15.3 151 78-245 3-174 (191)
27 1dyk_A Laminin alpha 2 chain; 98.2 5.9E-05 2E-09 69.0 16.1 142 82-241 216-367 (394)
28 2jd4_A Laminin subunit alpha-1 98.1 0.00014 4.9E-09 66.1 17.8 152 78-245 20-180 (383)
29 2jd4_A Laminin subunit alpha-1 98.0 9.5E-05 3.2E-09 67.3 13.9 147 80-243 201-357 (383)
30 1d2s_A SHBG, sex hormone-bindi 98.0 0.0003 1E-08 56.8 15.1 124 102-243 26-156 (170)
31 2uur_A Collagen alpha-1(IX) ch 97.9 0.00013 4.4E-09 62.7 12.8 153 77-243 61-221 (245)
32 1dyk_A Laminin alpha 2 chain; 97.9 0.00056 1.9E-08 62.4 17.9 153 79-247 35-195 (394)
33 3bod_A Neurexin-1-alpha; neure 97.9 0.00031 1.1E-08 57.1 14.3 149 76-243 3-157 (178)
34 2wjs_A Laminin subunit alpha-2 97.8 0.0003 1E-08 68.0 14.8 148 78-245 388-544 (608)
35 1ms9_A Trans-sialidase; trans- 97.8 0.0012 4.1E-08 64.0 18.1 159 78-254 465-636 (648)
36 1f5f_A SHBG, sex hormone-bindi 97.7 0.0016 5.4E-08 54.0 15.7 128 102-244 38-175 (205)
37 1h30_A GAS6, growth-arrest-spe 97.7 0.0011 3.8E-08 61.1 15.5 146 80-243 43-198 (422)
38 3asi_A Neurexin-1-alpha; beta- 97.7 0.0021 7E-08 59.0 16.9 146 80-244 8-164 (410)
39 3asi_A Neurexin-1-alpha; beta- 97.5 0.0016 5.5E-08 59.7 13.9 125 101-243 248-377 (410)
40 2wjs_A Laminin subunit alpha-2 97.4 0.0049 1.7E-07 59.4 16.1 150 79-245 205-368 (608)
41 2r1d_A Neurexin-1-beta, neurex 97.2 0.012 4.3E-07 49.5 14.7 149 75-242 38-190 (226)
42 2r1b_A Neurexin-1-beta, neurex 97.1 0.013 4.5E-07 49.1 14.0 150 74-242 7-192 (220)
43 3qcw_A Neurexin-1-alpha; synap 97.1 0.022 7.6E-07 59.5 18.4 152 80-249 424-601 (1245)
44 3qcw_A Neurexin-1-alpha; synap 96.8 0.034 1.2E-06 58.1 16.7 148 80-245 840-997 (1245)
45 4b1m_A Levanase; hydrolase, CB 95.8 0.074 2.5E-06 43.2 10.2 93 102-203 64-159 (185)
46 3zr5_A Galactocerebrosidase; h 95.0 0.32 1.1E-05 47.3 13.4 102 103-220 530-639 (656)
47 1h30_A GAS6, growth-arrest-spe 93.5 1.8 6.2E-05 39.3 14.4 126 103-246 250-399 (422)
48 3zyp_A CIP1; metal binding pro 93.3 0.44 1.5E-05 39.5 9.1 93 102-202 65-164 (218)
49 4azz_A Levanase; hydrolase; 1. 89.4 0.061 2.1E-06 42.9 0.0 35 164-203 104-138 (172)
50 3gne_A Val-1; alginate lyase, 82.6 1.8 6.2E-05 36.7 5.3 39 166-204 159-203 (252)
51 3imm_A Putative secreted glyco 77.1 4.3 0.00015 33.1 5.8 32 167-203 117-148 (201)
52 2zzj_A Glucuronan lyase A; bet 73.5 39 0.0013 28.2 13.8 38 165-202 144-181 (238)
53 3s5q_A Putative glycosylhydrol 72.7 6.4 0.00022 32.5 5.8 32 167-203 130-161 (214)
54 1oq1_A Protein YESU; structura 71.7 9.4 0.00032 31.6 6.4 64 167-240 155-218 (223)
55 3h3l_A Putative sugar hydrolas 71.1 6.1 0.00021 33.2 5.4 33 166-203 149-181 (241)
56 3u1x_A Putative glycosyl hydro 69.1 7 0.00024 32.7 5.3 34 165-203 155-188 (236)
57 3osd_A Putative glycosyl hydro 67.2 8 0.00027 33.0 5.4 32 167-203 176-207 (265)
58 3hbk_A Putative glycosyl hydro 63.6 9.1 0.00031 32.2 5.0 32 167-203 160-192 (245)
59 1dyo_A Endo-1,4-beta-xylanase 44.4 1E+02 0.0035 23.5 9.8 19 97-115 64-82 (160)
60 1b0n_B Protein (SINI protein); 32.7 41 0.0014 21.5 3.1 30 23-52 13-42 (57)
61 2ayh_A 1,3-1,4-beta-D-glucan 4 32.1 62 0.0021 26.0 5.0 33 170-208 142-174 (214)
62 3vkl_A Galectin-8; beta-sandwi 30.0 2.5E+02 0.0087 23.8 10.1 36 164-204 232-267 (291)
63 1y74_B MLIN-2/CASK, peripheral 29.6 96 0.0033 18.7 4.5 42 23-71 3-44 (50)
64 3i4i_A 1,3-1,4-beta-glucanase; 28.8 88 0.003 25.8 5.5 34 169-208 161-194 (234)
65 1cpn_A Circularly permuted; hy 26.3 98 0.0034 24.9 5.2 65 170-242 84-156 (208)
66 3o5s_A Beta-glucanase; glycosy 26.2 81 0.0028 26.1 4.8 44 169-220 165-211 (238)
67 1dyp_A Kappa-carrageenase; hyd 25.5 83 0.0028 26.3 4.8 29 170-203 190-218 (271)
68 2kd2_A FAS apoptotic inhibitor 25.3 19 0.00065 25.6 0.5 17 186-202 30-46 (94)
69 3b9c_A HSPC159; beta sandwich, 24.0 2.3E+02 0.0077 21.2 6.6 36 164-204 87-122 (144)
70 3iln_A Laminarinase; jelly ROW 22.9 1.1E+02 0.0037 25.4 4.9 30 169-203 164-193 (251)
71 2uwa_A Cellulase; glycoside hy 22.7 1E+02 0.0035 26.1 4.8 67 169-243 141-222 (274)
72 3bwu_D FIMD, outer membrane us 22.3 81 0.0028 23.0 3.7 20 188-208 34-53 (125)
73 4b0m_A F1 capsule-anchoring pr 22.3 62 0.0021 24.3 3.0 17 188-204 33-49 (136)
74 2kgf_A Capsid protein P27; ret 21.8 79 0.0027 24.1 3.5 26 25-50 41-66 (140)
75 2v4x_A JSRV capsid, capsid pro 21.5 84 0.0029 23.9 3.5 26 25-50 36-61 (140)
76 1w0p_A Sialidase; hydrolase, n 21.4 3.5E+02 0.012 26.5 8.9 32 168-201 149-180 (781)
77 1em9_A GAG polyprotein capsid 21.3 84 0.0029 24.2 3.5 25 25-49 36-60 (154)
78 1ajo_A CPA16M-127, circularly 21.1 1.6E+02 0.0054 23.8 5.5 77 170-265 16-100 (214)
79 2y5p_A Internalin B, INLB; pro 20.4 42 0.0014 22.4 1.5 16 99-114 32-47 (74)
80 2hyk_A Beta-1,3-glucanase; fam 20.3 1.4E+02 0.0048 24.4 5.1 29 170-203 166-194 (245)
81 2vy0_A Endo-beta-1,3-glucanase 20.2 1.4E+02 0.0049 24.6 5.2 30 169-203 180-209 (264)
82 1a78_A Galectin-1; S-lectin, c 20.1 2.6E+02 0.0091 20.5 6.6 36 164-204 77-112 (134)
No 1
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A
Probab=99.65 E-value=6.6e-15 Score=125.38 Aligned_cols=163 Identities=18% Similarity=0.286 Sum_probs=105.7
Q ss_pred EeecCCC-cccEECCCCCCCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeCC-CCeEEEEEeC-Ce----EEEEEe
Q psy14029 80 FSFPGKK-GSAMVLPPLAKWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSK-GVGYTAHFVG-NC----LVLTSM 152 (277)
Q Consensus 80 f~F~g~~-~s~i~lp~~~~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~-g~g~e~~~~~-~~----lvv~~~ 152 (277)
|.|+... .++..+++....|..+.||+|+|++.+. .. ...|||.-+.. ...+.++..+ +. +.+.+.
T Consensus 9 ~~Fp~~s~~~yv~l~~~~~~p~l~~fTvc~wv~~~~-~~------~~~lfSy~~~~~~n~l~l~~~~~~~g~~~~~l~i~ 81 (217)
T 3flp_A 9 ISFPGTQNPKFPHLRFMQTLPAVRQLTVCQRIKPFH-RN------TGYIFSCATSNQDNQFITSMYVKSDGTLNLGLQVN 81 (217)
T ss_dssp EEECCCBTTBCCEEEESSCBCCBSEEEEEEEEEESC-SS------CEEEEEEEETTEEEEEEEEEEECTTSEEEEEEEET
T ss_pred EEcCCCCCCCEEEEecCCCCCCCccEEEEEEEEecC-CC------CeeEEEEECCCCCceEEEEEeCCCCcceEEEEEEC
Confidence 6676542 3566665423457568999999999876 32 46799987642 2234444432 22 444332
Q ss_pred eecCcc-eeeeeeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeee-cccccccCCCcceeEeCCCCCC-----C
Q psy14029 153 KIKGKG-FQHCVKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTE-MAWFVSTNEPFDKCYIGATPEL-----D 225 (277)
Q Consensus 153 ~~~~~~-~~~~~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~-l~~~p~~~~~~~~~~IG~~~~~-----~ 225 (277)
|.. ........+.+++|||||+|.+. ....+.+||||+++.+.+ +. -.....+-....||..... +
T Consensus 82 ---g~~~~~~~~~~~~~~g~W~Hv~~t~d~---~~G~~~lYvdG~~~~~~~~~~-~g~~i~~~g~l~lG~~~~~~gg~f~ 154 (217)
T 3flp_A 82 ---ASSNKYISCPIEIELGQWYHVCHVWSG---VDGRMAVYANGSPCGTMENVG-KGHQISAGGTVVIGQEQDKIGGGFE 154 (217)
T ss_dssp ---TCCCEEEEEEEECCTTSCEEEEEEEET---TTTEEEEEETTEEEEEESCSS-TTCCBCSCBEEEESSCCSBTTBCCC
T ss_pred ---CccceeEEcccccCCCCEEEEEEEEEC---CCCEEEEEECCEEecceeccc-cCcEECCCCEEEeCCcccCCCCccC
Confidence 221 11223456889999999999983 234899999999998743 21 1111112345678876431 2
Q ss_pred CCccceEeccceeEecCCCCHHHHHHHHhCC
Q psy14029 226 EERVFCGQMAAIYLFNESLSTHQICAMHRLG 256 (277)
Q Consensus 226 ~~~~f~g~lg~~~lf~~aLs~~~I~~iy~lG 256 (277)
....|.|.|++++||+.+|+++||+.++..+
T Consensus 155 ~~~~f~G~i~~v~iw~~aLs~~eI~~l~~c~ 185 (217)
T 3flp_A 155 EQESWSGELSDLQVWDEALTTHQVSTVASCN 185 (217)
T ss_dssp GGGCCCEEEEEEEEESSCCCHHHHHHHHCTT
T ss_pred CCCceEEEEeeEEEECccCCHHHHHHHHhCC
Confidence 3468999999999999999999999999744
No 2
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A
Probab=99.63 E-value=2.5e-14 Score=120.89 Aligned_cols=164 Identities=14% Similarity=0.148 Sum_probs=106.4
Q ss_pred ceEeecCCC-cccEECCCCCCCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeCCC-CeEEEEEeC-CeEEEEEeee
Q psy14029 78 VFFSFPGKK-GSAMVLPPLAKWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKG-VGYTAHFVG-NCLVLTSMKI 154 (277)
Q Consensus 78 ~ff~F~g~~-~s~i~lp~~~~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g-~g~e~~~~~-~~lvv~~~~~ 154 (277)
..|.|++.. ..+..+++....| ...||+|+|++.+.... ....|||..+... ..+.++..+ +.+.+.+.
T Consensus 7 k~l~Fp~~s~~~yv~l~~~~~~~-l~~fTvc~wv~~~~~~~-----~~~~lfSy~~~~~~n~l~l~~~~~g~~~l~i~-- 78 (206)
T 3pvn_A 7 KAFVFPKESDTSYVSLKAPLTKP-LKAFTVCLHFYTELSST-----RGYSIFSYATKRQDNEILIFWSKDIGYSFTVG-- 78 (206)
T ss_dssp EEEEECSCCSSCEEEECCCCCSC-BSEEEEEEEEEESGGGT-----CCEEEEEEEETTEEEEEEEEEETTTEEEEEET--
T ss_pred CEEEcCCCCCCCEEEEecCCCCC-cCCEEEEEEEEecCCCC-----CcEEEEEEEcCCCCCEEEEEEcCCCeEEEEEC--
Confidence 457887752 3566665422223 58899999999876411 2357999877422 234444443 34544431
Q ss_pred cCcceeeeeeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCCcceeEeCCCCC-----CCCCcc
Q psy14029 155 KGKGFQHCVKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPFDKCYIGATPE-----LDEERV 229 (277)
Q Consensus 155 ~~~~~~~~~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~~~~~IG~~~~-----~~~~~~ 229 (277)
|+. ......+.+++|||||++.+. ....+.+||||+++.+..+. -.....+-....||.... .+....
T Consensus 79 -g~~--~~~~~~~~~g~W~Hv~~twd~---~~G~~~lyvdG~~~~~~~~~-~g~~i~~~g~l~lGq~qd~~gg~f~~~~~ 151 (206)
T 3pvn_A 79 -GSE--ILFEVPEVTVAPVHICTSWES---ASGIVEFWVDGKPRVRKSLK-KGYTVGAEASIILGQEQDSFGGNFEGSQS 151 (206)
T ss_dssp -TEE--EEEECSSCCSSCEEEEEEEET---TTCEEEEEETTEECCCEECC-TTCCBCSSCEEEESSCCSBTTBCCCGGGC
T ss_pred -CeE--EEEeccCCCCceEEEEEEEEC---CCCeEEEEECCEEccccccc-CCcEECCCCEEEEccccccCCCCcCCccc
Confidence 221 223456788999999999983 23589999999999764432 111111223567887642 123468
Q ss_pred ceEeccceeEecCCCCHHHHHHHHhCC
Q psy14029 230 FCGQMAAIYLFNESLSTHQICAMHRLG 256 (277)
Q Consensus 230 f~g~lg~~~lf~~aLs~~~I~~iy~lG 256 (277)
|.|.|++++||+.+|+++||+.++.-.
T Consensus 152 f~G~i~~v~iw~~aLs~~eI~~~~~~~ 178 (206)
T 3pvn_A 152 LVGDIGNVNMWDFVLSPDEINTIYLGG 178 (206)
T ss_dssp CCEEEEEEEEESSCCCHHHHHHHHHCC
T ss_pred eEEEEeeEEEECccCCHHHHHHHHhCC
Confidence 999999999999999999999999743
No 3
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A*
Probab=99.60 E-value=7.7e-14 Score=117.66 Aligned_cols=158 Identities=16% Similarity=0.167 Sum_probs=103.5
Q ss_pred ceEeecCCC-cccEECCCCCCCC-CCCceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCCeEEE--EEeC-CeEEEEEe
Q psy14029 78 VFFSFPGKK-GSAMVLPPLAKWP-HENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGVGYTA--HFVG-NCLVLTSM 152 (277)
Q Consensus 78 ~ff~F~g~~-~s~i~lp~~~~~p-~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~g~e~--~~~~-~~lvv~~~ 152 (277)
..|.|++.. ..+..+++ ..| +.+-||+|+|++.+.. ....|||.-+. +...+. +..+ +.+.+.+.
T Consensus 7 k~l~Fp~~s~~~yv~l~~--~~~~~l~~fTvc~wv~~~~~-------~~~tlfSy~~~-~~~nel~l~~~~~~~~~l~i~ 76 (204)
T 3kqr_A 7 KVFVFPRESVTDHVNLIT--PLEKPLQNFTLCFRAYSDLS-------RAYSLFSYNTQ-GRDNELLVYKERVGEYSLYIG 76 (204)
T ss_dssp EEEEECSCCSSCEEEEEC--CCCSCBSEEEEEEEEECCCC-------SCEEEEEEEET-TEEEEEEEEEEETTEEEEEET
T ss_pred CEEEcCCCCCCCEEEEeC--CCCCCcCCEEEEEEEEeCCC-------CCeEEEEEECC-CCCceEEEEEcCCCeEEEEEC
Confidence 357787652 35566543 224 2588999999997643 14679998764 333333 3323 34444321
Q ss_pred eecCcceeeeeeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeecc-cccccCCCcceeEeCCCCC-----CCC
Q psy14029 153 KIKGKGFQHCVKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMA-WFVSTNEPFDKCYIGATPE-----LDE 226 (277)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~-~~p~~~~~~~~~~IG~~~~-----~~~ 226 (277)
|+. ......+.+++|||||++.+. ....+.+||||+++.+..+. .++ + .+-....||...+ .+.
T Consensus 77 ---g~~--~~~~~~~~~g~W~Hv~~twd~---~~G~~~lyvdG~~~~~~~~~~g~~-i-~~~g~l~lGq~qd~~gg~f~~ 146 (204)
T 3kqr_A 77 ---RHK--VTSKVIEKFPAPVHICVSWES---SSGIAEFWINGTPLVKKGLRQGYF-V-EAQPKIVLGQEQDSYGGKFDR 146 (204)
T ss_dssp ---TEE--EEEECCCCSSCCEEEEEEEET---TTCEEEEEETTEECCCEECCTTCC-B-CSSCEEEESSCCSSSSCCCCG
T ss_pred ---CeE--EEEecccCCCceEEEEEEEEC---CCCeEEEEECCEEeeeeccCCCCE-E-CCCcEEEEcccccCCCCCcCc
Confidence 221 223466788999999999983 23489999999999764432 011 1 1223567887643 123
Q ss_pred CccceEeccceeEecCCCCHHHHHHHHhC
Q psy14029 227 ERVFCGQMAAIYLFNESLSTHQICAMHRL 255 (277)
Q Consensus 227 ~~~f~g~lg~~~lf~~aLs~~~I~~iy~l 255 (277)
..+|.|.|++++||+.+|+++||+.++.-
T Consensus 147 ~~~f~G~i~~v~iW~~aLs~~eI~~l~~~ 175 (204)
T 3kqr_A 147 SQSFVGEIGDLYMWDSVLPPENILSAYQG 175 (204)
T ss_dssp GGCCCEEEEEEEEESSCCCHHHHHHHHHT
T ss_pred ccceeEEEeeEEEECccCCHHHHHHHHhC
Confidence 46899999999999999999999999974
No 4
>1a8d_A Tetanus neurotoxin; clostridial, ganglioside binding region; 1.57A {Clostridium tetani} SCOP: b.29.1.6 b.42.4.2 PDB: 1af9_A 1fv3_A* 1fv2_A* 3hmy_A* 3hn1_A* 1d0h_A* 1dfq_A* 1dll_A* 1yxw_A* 1yyn_A* 1diw_A*
Probab=99.54 E-value=1.6e-13 Score=124.71 Aligned_cols=172 Identities=19% Similarity=0.263 Sum_probs=108.0
Q ss_pred ceEeecCCCcc--cEECCCCCCC-CCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeC---C----CCeEEEEEeCCeE
Q psy14029 78 VFFSFPGKKGS--AMVLPPLAKW-PHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTS---K----GVGYTAHFVGNCL 147 (277)
Q Consensus 78 ~ff~F~g~~~s--~i~lp~~~~~-p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~---~----g~g~e~~~~~~~l 147 (277)
..|.|.|...+ .+..|+--.. --.+-||+|+|+|....+...+..+....+++... . ..|.++++.++.+
T Consensus 58 kA~~l~~~~~s~~~V~~~n~ii~N~~t~dFSISFWvK~~k~~~~~i~~~~~~e~TIin~k~~n~~s~nsGW~I~l~gn~l 137 (452)
T 1a8d_A 58 KAIHLVNNESSEVIVHKAMDIEYNDMFNNFTVSFWLRVPKVSASHLEQYGTNEYSIISSMKKHSLSIGSGWSVSLKGNNL 137 (452)
T ss_dssp EEEEEESSTTCCEEEECCGGGTTTTTTSCEEEEEEEECCCCCHHHHHHHTTCEEEEEECCEECGGGCEEEEEEEEETTEE
T ss_pred ceEEeccCCCcceEEecCchHhhccCCCceEEEEEEECCCcCcccccccccCcceEEeeeccccccCCCCeEEEeCCCeE
Confidence 44666664212 3555531000 11357999999999886311000111223444422 2 5689999999999
Q ss_pred EEEEeeecCcceeee---eeeEEe---CCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCCcceeEeC--
Q psy14029 148 VLTSMKIKGKGFQHC---VKYEFQ---PRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPFDKCYIG-- 219 (277)
Q Consensus 148 vv~~~~~~~~~~~~~---~~~~~~---~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~~~~~IG-- 219 (277)
+.......|...... ....++ .++|||||||+++ ....++||||+++.+..+...-.+... ....+|
T Consensus 138 iw~l~Dsng~~~~i~f~~~~~~Isd~~~nkW~fVtItvDR----~g~~~IYING~Lv~s~~It~lG~I~ss-~~i~~gi~ 212 (452)
T 1a8d_A 138 IWTLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDR----LSSANLYINGVLMGSAEITGLGAIRED-NNITLKLD 212 (452)
T ss_dssp EEEEECTTSCEEEEEEECCSBTTSCSSSSSCEEEEEEECT----TSEEEEEETTEEEEEEECTTCCCCCCC-SEEEEEEE
T ss_pred EEEEEcCCCceeeEEeccccccCccccCCeEEEEEEEECC----CCCEEEEECCEEeeccchhhccceeec-CeEEEEEc
Confidence 887665544433221 123333 6999999999995 334599999999999876532222111 122344
Q ss_pred CCCCCCCCccceEeccceeEecCCCCHHHHHHHHhCCCC
Q psy14029 220 ATPELDEERVFCGQMAAIYLFNESLSTHQICAMHRLGPG 258 (277)
Q Consensus 220 ~~~~~~~~~~f~g~lg~~~lf~~aLs~~~I~~iy~lGp~ 258 (277)
+... .++.+.|+.++||+++|+++||+.||.-.|+
T Consensus 213 ~~~d----~~~~~~IDef~Iynk~Lt~~EI~~LY~~~~~ 247 (452)
T 1a8d_A 213 RCNN----NNQYVSIDKFRIFCKALNPKEIEKLYTSYLS 247 (452)
T ss_dssp SCCC----TTCEEEEEEEEEESSCCCHHHHHHHHHTTCC
T ss_pred ccCC----CcccceEeeEEEecccCCHHHHHHHHhcCCC
Confidence 5443 2467899999999999999999999998886
No 5
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}
Probab=99.48 E-value=7.1e-12 Score=103.11 Aligned_cols=145 Identities=17% Similarity=0.199 Sum_probs=105.0
Q ss_pred CCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeCC--CCeEEEEEeCCeEEEEEeeecCcceee-eeeeE-EeCCcE
Q psy14029 97 KWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSK--GVGYTAHFVGNCLVLTSMKIKGKGFQH-CVKYE-FQPRKW 172 (277)
Q Consensus 97 ~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~--g~g~e~~~~~~~lvv~~~~~~~~~~~~-~~~~~-~~~~~W 172 (277)
+.+.-.-+|+.+|++-++ +. ...|||+.++. +.-+.+|+.++.+-++..+..+...+. ..... ....+|
T Consensus 35 ~lk~L~~gTI~v~fks~~-~~------~q~LfSIsN~k~~n~yf~lyi~~g~lg~e~R~~~~~~~~~~~~~a~v~~~~~w 107 (191)
T 2v73_A 35 KFSSLEEGTIVTRFNMND-TS------IQSLIGLSDGNKANNYFSLYVSGGKVGYELRRQEGNGDFNVHHSADVTFNRGI 107 (191)
T ss_dssp GTTTCSSEEEEEEEEECC-CS------CEEEEEEECTTCSSCEEEEEECSSEEEEEEEECTTSSCEEEEEEEECCCCSSC
T ss_pred HhcCcCCcEEEEEEecCC-Cc------ceEEEEccCCCCccceEEEEEeCCEEEEEEecCCCceeeeeecccceecCCce
Confidence 445557899999999998 33 35799998753 334677888777777765544433222 12222 233599
Q ss_pred EEEEEEEEeccCCCCeEEEEECCEEeeeeeccc--ccccCCCcceeEeCCCCC--CCCCccceEeccceeEecCCCCHHH
Q psy14029 173 YMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAW--FVSTNEPFDKCYIGATPE--LDEERVFCGQMAAIYLFNESLSTHQ 248 (277)
Q Consensus 173 ~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~--~p~~~~~~~~~~IG~~~~--~~~~~~f~g~lg~~~lf~~aLs~~~ 248 (277)
||||++.+. .+.++||+||+++.+.+... +.+.. ......||+..- +....+|.|+|+.+.||++||+++|
T Consensus 108 ntvaf~~d~----~~~~~ly~NG~~V~t~~~~~~~fi~~i-~ln~~~IG~~~r~sg~~~y~F~G~Id~~~iYn~aLs~eE 182 (191)
T 2v73_A 108 NTLALKIEK----GIGAKIFLNGSLVKTVSDPNIKFLNAI-NLNSGFIGKTDRANGYNEYLFRGNIDFMNIYDKPVSDNY 182 (191)
T ss_dssp EEEEEEEET----TTEEEEEETTEEEEEEECTTCCCGGGS-CCCEEEESSCCCCSSSCCCCCCEEEEEEEEESSCCCHHH
T ss_pred EEEEEEEcC----CccEEEEECCEEEEEEecccccceeec-CCceEEEcceeecCCceeeccCCeEEEEEEEcCcCCHHH
Confidence 999999984 56999999999999986541 23332 456788999532 2345789999999999999999999
Q ss_pred HHHHH
Q psy14029 249 ICAMH 253 (277)
Q Consensus 249 I~~iy 253 (277)
|+.+|
T Consensus 183 i~~lt 187 (191)
T 2v73_A 183 LLRKT 187 (191)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 99998
No 6
>2nyy_A Botulinum neurotoxin type A; neurotoxin, FAB, protein antibody complex, toxin- system complex; 2.61A {Clostridium botulinum} PDB: 2nz9_A 3bta_A 3v0a_A* 3v0b_A 3v0c_A 3zus_A 3zur_A
Probab=99.47 E-value=1.8e-12 Score=128.04 Aligned_cols=159 Identities=13% Similarity=0.177 Sum_probs=114.5
Q ss_pred CCceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCCeEEEEEeCCeEEEEEeeecCcceeeeee----eEEe--CCcEEE
Q psy14029 101 ENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGVGYTAHFVGNCLVLTSMKIKGKGFQHCVK----YEFQ--PRKWYM 174 (277)
Q Consensus 101 ~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~g~e~~~~~~~lvv~~~~~~~~~~~~~~~----~~~~--~~~W~h 174 (277)
.+-||+|+|+|+.............+|++.. .+++|.+++|.+++++.+..++.|+......+ ..++ .++|||
T Consensus 937 ~~nFSIsFWvRipk~~~~~~~~neyTIIg~~-~nNsGW~Is~~~n~LIWtl~Dsng~~k~I~f~y~~~~nisdyiNkW~f 1015 (1295)
T 2nyy_A 937 YENFSTSFWIRIPKYFNSISLNNEYTIINCM-ENNSGWKVSLNYGEIIWTLQDTQEIKQRVVFKYSQMINISDYINRWIF 1015 (1295)
T ss_dssp TSEEEEEEEEECCCCCSGGGGGCCEEEEEEE-ETTEEEEEEEETTEEEEEEECSSSCEEEEEEECCSBSSSCSSTTSCEE
T ss_pred cCceEEEEEEEcCCcccccccCCcceEEEee-cCCCCcEEEECCCeEEEEEecCCCccceEEEecccccchhhccCceEE
Confidence 3479999999998875422122336888665 46789999999999999877776655543332 2333 599999
Q ss_pred EEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCCcce--eEeCCCCCCCCCccceEeccceeEecCCCCHHHHHHH
Q psy14029 175 IAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPFDK--CYIGATPELDEERVFCGQMAAIYLFNESLSTHQICAM 252 (277)
Q Consensus 175 lavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~~~--~~IG~~~~~~~~~~f~g~lg~~~lf~~aLs~~~I~~i 252 (277)
|+|++++ .....+||||+++.+.++.....+..+... -.+|.+- .++.+.|..+.||+.+|+++||..+
T Consensus 1016 VTITndR----lgna~IYINGkLi~~~~I~~l~nI~~sd~Isfk~~g~nD-----~~~~i~Id~l~IfnkeLt~~EI~~L 1086 (1295)
T 2nyy_A 1016 VTITNNR----LNNSKIYINGRLIDQKPISNLGNIHASNNIMFKLDGCRD-----THRYIWIKYFNLFDKELNEKEIKDL 1086 (1295)
T ss_dssp EEEEEET----TSEEEEEETTEEEEEEECTTCCCCCCCSEEEEEEESCCC-----TTCEEEEEEEEEESSCCCHHHHHHH
T ss_pred EEEEEcC----CCceeEEECCEEeecceecccCCcccCceEEEEeccCCC-----CccceeEeeEEEecCcCCHHHHHHH
Confidence 9999995 445699999999999887754444333221 2366552 2578999999999999999999999
Q ss_pred HhCCCCCccCCCCCcccCcccccC
Q psy14029 253 HRLGPGYKVKTGWVEELNSSWGEE 276 (277)
Q Consensus 253 y~lGp~y~~~fq~~~~~~~~~~~~ 276 (277)
|...|+ .+-+--.|++.
T Consensus 1087 Y~~~~~-------~s~lkD~wgn~ 1103 (1295)
T 2nyy_A 1087 YDNQSN-------SGILKDFWGDY 1103 (1295)
T ss_dssp HHHHTC-------TTBCBCTTSSB
T ss_pred HhcccC-------cchhhhccCCc
Confidence 998876 33344455554
No 7
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus}
Probab=99.47 E-value=1.9e-12 Score=117.90 Aligned_cols=135 Identities=16% Similarity=0.222 Sum_probs=89.3
Q ss_pred CCCceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCCeEEEEEe--------CCeEEEEEeeecCcceeeeeeeEEeCCc
Q psy14029 100 HENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGVGYTAHFV--------GNCLVLTSMKIKGKGFQHCVKYEFQPRK 171 (277)
Q Consensus 100 ~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~g~e~~~~--------~~~lvv~~~~~~~~~~~~~~~~~~~~~~ 171 (277)
..+.||+.+|||++.+.. ..+|+. .. ..+.+.+. .+.|-+. +.+ .......+.+++
T Consensus 159 ~~~~~T~eawv~~~~~~~------~~ti~g---~e-~~~~lr~gd~~~g~~~~~~Lq~~---~~~---~~~s~~~l~~g~ 222 (355)
T 4dqa_A 159 FFSSFTYEALINVDYFLD------NNTIMG---TE-GVMILRIGDAGGGITPKDYLEVA---GGQ---NYRVTKPLLTNR 222 (355)
T ss_dssp CBSSEEEEEEEEESCCCS------SEEEEE---ET-TTEEEEEEEGGGTSEEEEEEEEE---ESS---CEECSSCCCSSC
T ss_pred CCCcEEEEEEEECCcCCC------cceEEe---CC-CeEEEEEecCCCCCCcCCeEEEe---cCC---ccccCCcccCCC
Confidence 356999999999999864 234543 11 22333332 1223332 111 122345688999
Q ss_pred EEEEEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCC-cceeEeCCCCCCC-CCccceEeccceeEecCCCCHHHH
Q psy14029 172 WYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEP-FDKCYIGATPELD-EERVFCGQMAAIYLFNESLSTHQI 249 (277)
Q Consensus 172 W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~-~~~~~IG~~~~~~-~~~~f~g~lg~~~lf~~aLs~~~I 249 (277)
|||||+|++.. ...+++||||+++.+.... ...+... ...+.||...... ....|.|.|++++||+.||+++||
T Consensus 223 W~HvA~t~d~~---~~~~~lYvNG~~~~~~~~~-~~~~~~~~~~~l~IG~~~~~~~~~~~f~G~IdevrIw~~aLs~~eI 298 (355)
T 4dqa_A 223 WYHVALTYDQP---TGKTGIYVNGEKWAGSDWG-IDGFDPNSDMGFYIGRIYGFKWGERPFHGKMSEVRVWSVARTENQL 298 (355)
T ss_dssp EEEEEEEEETT---TTEEEEEETTEEEEEEECC-CCCBCTTSTTCEEESCCTTCTTCCCCCEEEEEEEEEESSCCCHHHH
T ss_pred EEEEEEEEECC---CCEEEEEECCEEEEEEecC-CCccccCCCceEEECCCCCCCCCCcceeEEEEEEEEECCcCCHHHH
Confidence 99999999842 4589999999999887643 1222111 2347899875421 245799999999999999999999
Q ss_pred HHHHh
Q psy14029 250 CAMHR 254 (277)
Q Consensus 250 ~~iy~ 254 (277)
+..+.
T Consensus 299 ~~~~~ 303 (355)
T 4dqa_A 299 KQNML 303 (355)
T ss_dssp HHTTT
T ss_pred HHHhh
Confidence 97543
No 8
>3rsj_A BONT/F; clostridium botulinum type F, ganglioside binding site, GD1A; HET: NGA GAL SIA; 2.00A {Clostridium botulinum} PDB: 3fuq_A
Probab=99.45 E-value=9.3e-12 Score=111.18 Aligned_cols=149 Identities=13% Similarity=0.199 Sum_probs=104.4
Q ss_pred CCceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCCeEEEEEeCCeEEEEEeeecCcceeeeee------e-EEeCCcEE
Q psy14029 101 ENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGVGYTAHFVGNCLVLTSMKIKGKGFQHCVK------Y-EFQPRKWY 173 (277)
Q Consensus 101 ~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~g~e~~~~~~~lvv~~~~~~~~~~~~~~~------~-~~~~~~W~ 173 (277)
.+.||+|+|||+..+.+...-.....+++-...++.|.+++|..++++.+....+|+.....+. . +. .++|+
T Consensus 66 ~~nfSiSFWvRi~k~~~~~nl~n~ytii~~wp~NNwGW~i~~~~n~~iWtliD~ng~~~~i~fry~~~~~~~dy-in~W~ 144 (413)
T 3rsj_A 66 YQNFSISFWVRIPKYFNKVNLNNEYTIIDCIRNNNSGWKISLNYNKIIWTLQDTAGNNQKLVFNYTQMISISDY-INKWI 144 (413)
T ss_dssp SCCEEEEEEEECCCCCSGGGTTCCEEEEEEEETTTEEEEEEEETTEEEEEEECTTSCEEEEEEECCSBSSSCSS-TTSEE
T ss_pred ccceEEEEEEEcCCcccccccccccceecceeccCccceEEecCCceEEEEEcCCCCeeEEEEeecccCCcccc-ccceE
Confidence 5789999999999986411112345677666668899999999999999888777765433221 1 12 39999
Q ss_pred EEEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCCcceeEeCCCCCCCCCccceEeccceeEecCCCCHHHHHHHH
Q psy14029 174 MIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPFDKCYIGATPELDEERVFCGQMAAIYLFNESLSTHQICAMH 253 (277)
Q Consensus 174 hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~~~~~IG~~~~~~~~~~f~g~lg~~~lf~~aLs~~~I~~iy 253 (277)
||+|++++ .+ .-.+||||+++.+.+.......... .....|...+.+ .+.|-+..+.+|+.+|+++||..||
T Consensus 145 hVTIT~dr--lg--~~~IYINGklv~~~~i~~L~~I~~s-n~I~fg~~~~~~---~~n~~Idd~~IfdKeLt~~EV~~mY 216 (413)
T 3rsj_A 145 FVTITNNR--LG--NSRIYINGNLIDEKSISNLGDIHVS-DNILFKIVGCND---TRYVGIRYFKVFDTELGKTEIETLY 216 (413)
T ss_dssp EEEEEECT--TS--EEEEEETTEEEEEEECTTCCCCCCC-SEEEEEEESCCS---SCEEEEEEEEEESSCCCHHHHHHHH
T ss_pred EEEEEecC--CC--CeeEEECCEEecceehhhccccccc-cceEEeeecccC---cceEEEEEEEEEcccCCHHHHHHHH
Confidence 99999984 22 3599999999999886532222111 111223222211 3789999999999999999999999
Q ss_pred hCCCC
Q psy14029 254 RLGPG 258 (277)
Q Consensus 254 ~lGp~ 258 (277)
.-.+.
T Consensus 217 ~~~~~ 221 (413)
T 3rsj_A 217 SDEPD 221 (413)
T ss_dssp HHSSC
T ss_pred hccCC
Confidence 87654
No 9
>3v0a_B NTNH; botulinum neurotoxin, toxin, neurotoxin associated protein, progenitor toxin complex, VHH bound interlocked complex; HET: MES; 2.70A {Clostridium botulinum} PDB: 3v0b_B
Probab=99.33 E-value=6.4e-11 Score=114.51 Aligned_cols=139 Identities=14% Similarity=0.197 Sum_probs=102.1
Q ss_pred CCceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCCeEEEEEeCCeEEEEEeeecCcceeeeeeeEEeCCcEEEEEEEEE
Q psy14029 101 ENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGVGYTAHFVGNCLVLTSMKIKGKGFQHCVKYEFQPRKWYMIAIVYI 180 (277)
Q Consensus 101 ~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~g~e~~~~~~~lvv~~~~~~~~~~~~~~~~~~~~~~W~hlavv~~ 180 (277)
.+.||+|+|+|+..... +.+.|++... +++|.+++|.+++++.+...+.|+......+ .+.+++||||+|+++
T Consensus 901 tnnFSISFWVRipk~~~-----~eyTIIg~~~-nNsGW~ISf~~n~LIWtl~DsnGn~knI~f~-dy~~NkWyfITISvD 973 (1196)
T 3v0a_B 901 TNSFSIYFWLRNLGKDT-----IKSKLIGSKE-DNCGWEIYFQDTGLVFNMIDSNGNEKNIYLS-DVSNNSWHYITISVD 973 (1196)
T ss_dssp SCCEEEEEEEEECCCCC-----SCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTCCEEEEEEC-SCCSSSCEEEEEEEE
T ss_pred ccceEEEEEEEcCCcCC-----ccceEEEeec-CCCCcEEEECCCeEEEEEEcCCCcccceEec-cccCCcEEEEEEEEc
Confidence 35799999999999854 3578987664 6789999999999998877666655433333 567899999999999
Q ss_pred eccCCCCeEEEEECCEEeeeeecccccccCCCcceeEeCCCCCCCCCccceEeccceeEecCCCCHHHHHHHHhCCC
Q psy14029 181 YNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPFDKCYIGATPELDEERVFCGQMAAIYLFNESLSTHQICAMHRLGP 257 (277)
Q Consensus 181 ~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~~~~~IG~~~~~~~~~~f~g~lg~~~lf~~aLs~~~I~~iy~lGp 257 (277)
+- +..+.+||||+++.+..+...-.+...-....+|.+ ..-.|..+.||+.+|++++|..+|.--+
T Consensus 974 RL---GnalkIYINGkLv~~~sI~~l~nI~sSn~Isfvg~n--------~~i~Ie~f~IfnKeLt~eEI~~lY~s~l 1039 (1196)
T 3v0a_B 974 RL---KEQLLIFIDDNLVANESIKEILNIYSSNIISLLSEN--------NPSYIEGLTILNKPTTSQEVLSNYFEVL 1039 (1196)
T ss_dssp TT---TTEEEEEETTEEEEEEECTTCCCCCCCSEEEECCTT--------CCEEEEEEEEESSCCCHHHHHHHHHHHH
T ss_pred CC---CceeEEEECCEEeechhhhhhcCeeecceEEEecCC--------CeeeeeeeehhcccCCHHHHHHHHHhcC
Confidence 53 446699999999999887622222111111224443 1237899999999999999999997443
No 10
>1epw_A Bontoxilysin B, botulinum neurotoxin type B; zinc, metalloprotease, transmembrane, hydrolase; 1.90A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 1f31_A* 1g9a_A* 1g9b_A* 1g9c_A* 1g9d_A* 1i1e_A* 1s0b_A 1s0c_A 1s0d_A 1s0e_A 1s0f_A 1s0g_A 2np0_A 3zuq_A 2etf_A 2xhl_A 1z0h_A 2nm1_A 3g94_A 1f82_A ...
Probab=99.31 E-value=2.5e-11 Score=119.99 Aligned_cols=159 Identities=19% Similarity=0.331 Sum_probs=109.3
Q ss_pred CceeEEEEEEecCCCCCCCC---CCCceEEEEEeCCCCeEEEEEeCCeEEEEEeeecCcceeeeee----eEEe--CCcE
Q psy14029 102 NGFTFTTWFRLDPINSVNIE---REKPYLYSFKTSKGVGYTAHFVGNCLVLTSMKIKGKGFQHCVK----YEFQ--PRKW 172 (277)
Q Consensus 102 ~GfTfs~Wi~le~~~~~~~~---~~~~~Lfs~~~~~g~g~e~~~~~~~lvv~~~~~~~~~~~~~~~----~~~~--~~~W 172 (277)
+.||+|+|+|+.......+. ....+|++.. .+++|.+++|.+++++.+..++.|+...+..+ ..++ .++|
T Consensus 923 ~nFSIsFWiRipk~~~~~it~y~~nEyTiIg~~-~nNsGW~Isi~~n~lIWtl~D~ng~~k~I~f~y~~~~nisdyiNkW 1001 (1290)
T 1epw_A 923 LDFSVSFWIRIPKYKNDGIQNYIHNEYTIINCM-KNNSGWKISIRGNRIIWTLIDINGKTKSVFFEYNIREDISEYINRW 1001 (1290)
T ss_dssp CCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEE-ETTEEEEEEEETTEEEEEEECTTCCEEEEEEECCSSCSSCSSTTSC
T ss_pred cceeEEEEEEcCCccccccccccCCCceEEEEe-cCCCCcEEEECCCeEEEEEecCCCcceeEEEecccccchhhccCce
Confidence 47999999999887322221 1236788655 46789999999999999877777765544332 2233 5999
Q ss_pred EEEEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCCcceeEeCCCCCCCCCccceEeccceeEecCCCCHHHHHHH
Q psy14029 173 YMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPFDKCYIGATPELDEERVFCGQMAAIYLFNESLSTHQICAM 252 (277)
Q Consensus 173 ~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~~~~~IG~~~~~~~~~~f~g~lg~~~lf~~aLs~~~I~~i 252 (277)
||||||++ ..++.+||||+++.+.++...-.+.. .....+|-..+.+ .++.+-|..+.||+.+|+++||..+
T Consensus 1002 ~fVTItnd-----lg~~~IYING~Li~~~~I~~L~dI~s-s~~I~fglvn~~D--~~~~i~Id~f~IfnkeLt~~EI~~L 1073 (1290)
T 1epw_A 1002 FFVTITNN-----LNNAKIYINGKLESNTDIKDIREVIA-NGEIIFKLDGDID--RTQFIWMKYFSIFNTELSQSNIEER 1073 (1290)
T ss_dssp EEEEEEEC-----SSEEEEEETTEEEEEEECSSCCCCCC-CSEEEEEEEESCC--TTCCEEEEEEEEESSCCCHHHHHHH
T ss_pred EEEEEEec-----CCceEEEECCEEeechhhhhhhceee-cceEEEEeccCCC--CCceeeEeeEEEecCcCCHHHHHHH
Confidence 99999998 23899999999999987652111111 1122333111112 2578899999999999999999999
Q ss_pred HhCCCCCccCCCCCcccCcccccC
Q psy14029 253 HRLGPGYKVKTGWVEELNSSWGEE 276 (277)
Q Consensus 253 y~lGp~y~~~fq~~~~~~~~~~~~ 276 (277)
|...|+ .+-+--.|++.
T Consensus 1074 Y~~~~~-------~s~lkD~wGn~ 1090 (1290)
T 1epw_A 1074 YKIQSY-------SEYLKDFWGNP 1090 (1290)
T ss_dssp HHHHHC-------CSBCBCTTSSB
T ss_pred HhcccC-------cchhhhccCCc
Confidence 998765 33344455554
No 11
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=99.24 E-value=2.9e-10 Score=111.56 Aligned_cols=176 Identities=13% Similarity=0.117 Sum_probs=119.4
Q ss_pred EeecCCCcccEECCCC--CCCCC-CCceeEEEEEEecCCCCCCCCCCCceEEEEEeCC----CCeEEEEEeCC-eEEEEE
Q psy14029 80 FSFPGKKGSAMVLPPL--AKWPH-ENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSK----GVGYTAHFVGN-CLVLTS 151 (277)
Q Consensus 80 f~F~g~~~s~i~lp~~--~~~p~-~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~----g~g~e~~~~~~-~lvv~~ 151 (277)
.+++|. .++.||.. .+.-. .+-||+++|++.+..+. ...||++.... +..+.+|+.++ .+.++.
T Consensus 12 ~~~~~~--~~~~l~~~~~~~~~~~l~~~Ti~~~~~~~~~~~------~~~lfs~s~~~~~~~~~~~~~~i~~~g~~~~~~ 83 (679)
T 2sli_A 12 VDIAEG--QGYSLDQEAGAKYVKAMTQGTIILSYKSTSENG------IQSLFSVGNSTAGNQDRHFHIYITNSGGIGIEL 83 (679)
T ss_dssp EEECTT--TCEECTTSTTHHHHTTCSSEEEEEEEEECCCCS------EEEEEEEECCSTTCTTEEEEEEEETTSCEEEEE
T ss_pred EEecCC--CceeCCHHHHHHhhccccCeEEEEEEEcCCCCC------ceEEEEeecCCccccCcceEEEEcCCCeEEEEE
Confidence 567775 68999962 12221 46799999999998643 24798887643 24578888854 576765
Q ss_pred eeecCc-ceeeeeeeEEeC---C--cEEEEEEEEEeccCCCCeEEEEECCEEeeeeecccc---cccCCCcceeEeCCC-
Q psy14029 152 MKIKGK-GFQHCVKYEFQP---R--KWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWF---VSTNEPFDKCYIGAT- 221 (277)
Q Consensus 152 ~~~~~~-~~~~~~~~~~~~---~--~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~---p~~~~~~~~~~IG~~- 221 (277)
....+. .+.......+.+ + .|+|||+|.+.. ...+++||||+++.+.+...+ +.+. ......||..
T Consensus 84 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~---~~~~~lyvnG~~v~~~~~~~~~f~~~~~-~~~~~~iG~~~ 159 (679)
T 2sli_A 84 RNTDGVFNYTLDRPASVRALYKGERVFNTVALKADAA---NKQCRLFANGELLATLDKDAFKFISDIT-GVDNVTLGGTK 159 (679)
T ss_dssp EECTTTCEEEEEESSCCCSEETTEECCEEEEEEEETT---TTEEEEEETTEEEEEEECSSCCCGGGST-TCCEEEESSEE
T ss_pred ecCCCCeeeecccccccccccCCCceeEEEEEEEECC---CCeEEEEECCEEeEeecccccccccccC-CCceEEEeeee
Confidence 544332 222111223332 4 699999999842 568999999999998765311 2332 2456789983
Q ss_pred CCCCCCccceEeccceeEecCCCCHHHHHHHHhCCCCCccCCCCCc
Q psy14029 222 PELDEERVFCGQMAAIYLFNESLSTHQICAMHRLGPGYKVKTGWVE 267 (277)
Q Consensus 222 ~~~~~~~~f~g~lg~~~lf~~aLs~~~I~~iy~lGp~y~~~fq~~~ 267 (277)
.......+|.|+|+.+.||++||+++||+.++..=|.-..-|+...
T Consensus 160 ~~g~~~~~f~G~i~~~~iy~~~Ls~~ev~~~~~~~~~~~~~f~~g~ 205 (679)
T 2sli_A 160 RQGKIAYPFGGTIGDIKVYSNALSDEELIQATGVTTYGENIFYAGD 205 (679)
T ss_dssp ETTEEESCCCEEEEEEEEESSCCCHHHHHHHHTTCCCSBCSSCTTS
T ss_pred cCCceeccccceEeEEEEeCCCCCHHHHhhhhccCcccceeEeCCC
Confidence 2122233699999999999999999999999988777667776643
No 12
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=99.21 E-value=2.1e-10 Score=112.72 Aligned_cols=174 Identities=17% Similarity=0.199 Sum_probs=115.8
Q ss_pred EeecCCCcccEECCC--CCCCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeCC----CCeEEEEEeCC-eEEEEEe
Q psy14029 80 FSFPGKKGSAMVLPP--LAKWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSK----GVGYTAHFVGN-CLVLTSM 152 (277)
Q Consensus 80 f~F~g~~~s~i~lp~--~~~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~----g~g~e~~~~~~-~lvv~~~ 152 (277)
..|+| .++.+|. +.+.+. .-|||++||+.+.... -..||++.... +..+.+|+.++ .+.+...
T Consensus 37 ~~~~~---~~~~l~~~~~~~~~~-~~~T~~~~~~~~~~~~------~~~lfs~sn~~~~~~~~~~~~~i~~~g~~~~~~r 106 (686)
T 2jkb_A 37 YQLNN---KSIDISSLLLDKLSG-ESQTVVMKFKADKPNS------LQALFGLSNSKAGFKNNYFSIFMRDSGEIGVEIR 106 (686)
T ss_dssp EEEES---SCEECHHHHGGGCCS-SCEEEEEEEECSSCCS------EEEEEEEECCSTTCTTCEEEEEEETTSCEEEEEE
T ss_pred EEEcC---CeEECChhhhhhccc-CceEEEEEEEccCCCC------eeEEEEeecCcccccCcceEEEEcCCCeEEEEEe
Confidence 66774 5799875 234454 6689999999888642 24799987642 34588888744 5777755
Q ss_pred eecCcc-eeeeeeeEEe---CC--cEEEEEEEEEeccCCCCeEEEEECCEEeeeeecccc--cccCCCcceeEeCC-CCC
Q psy14029 153 KIKGKG-FQHCVKYEFQ---PR--KWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWF--VSTNEPFDKCYIGA-TPE 223 (277)
Q Consensus 153 ~~~~~~-~~~~~~~~~~---~~--~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~--p~~~~~~~~~~IG~-~~~ 223 (277)
.+++.. +.......+. .+ +|+|||++.+.. ...+++||||+++.+.+...| -+..+......||+ ...
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~d~~---~~~~~lyvnG~~v~~~~~~~~~~~~~~~~~~~~~iG~~~~~ 183 (686)
T 2jkb_A 107 DAQKGINYLFSRPASLWGKHKGQAVENTLVFVSDSK---DKTYTMYVNGIEVFSETVDTFLPISNINGIDKATLGAVNRE 183 (686)
T ss_dssp ETTTTEEEEEEESSCCCCEETTEECCEEEEEEEETT---TTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEEET
T ss_pred cCCCCeeeeccccccccccccCCcceeEEEEEEECC---CCeEEEEECCEEEEeecccccceeccCCCcceeeecccccC
Confidence 444432 2221112233 35 799999999842 458999999999998764312 11112234567997 333
Q ss_pred CCCCccceEeccceeEecCCCCHHHHHHHHhCCCCCccCCCCCc
Q psy14029 224 LDEERVFCGQMAAIYLFNESLSTHQICAMHRLGPGYKVKTGWVE 267 (277)
Q Consensus 224 ~~~~~~f~g~lg~~~lf~~aLs~~~I~~iy~lGp~y~~~fq~~~ 267 (277)
.....+|.|+|+.+.||++||+++||+.++..-| |..-|+...
T Consensus 184 g~~~~~f~G~id~~~iy~~~Ls~~ei~~~~~~~~-~~~lf~~g~ 226 (686)
T 2jkb_A 184 GKEHYLAKGSIDEISLFNKAISDQEVSTIPLSNP-FQLIFQSGD 226 (686)
T ss_dssp TEEESCCEEEEEEEEEESSCCCHHHHHTSCCCCS-CBCSSCTTS
T ss_pred CcccccccceEeEEEEecCCCCHHHHHHHhcCCc-chhhccCCC
Confidence 2333469999999999999999999999886444 356666543
No 13
>2vu9_A Botulinum neurotoxin A heavy chain; hydrolase, metalloprotease, ganglioside, metal-B toxin, protease, membrane, receptor, secreted; HET: BGC GAL SIA NGA; 1.6A {Clostridium botulinum} PDB: 2vua_A 3fuo_A
Probab=99.12 E-value=3.4e-09 Score=94.80 Aligned_cols=147 Identities=13% Similarity=0.186 Sum_probs=100.7
Q ss_pred CCceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCCeEEEEEeCCeEEEEEeeecCcceeeeeee------EEeCCcEEE
Q psy14029 101 ENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGVGYTAHFVGNCLVLTSMKIKGKGFQHCVKY------EFQPRKWYM 174 (277)
Q Consensus 101 ~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~g~e~~~~~~~lvv~~~~~~~~~~~~~~~~------~~~~~~W~h 174 (277)
.+.||+|+|+|+-.....-......+|++... +++|.+++|..++++.+..++.|++....+.+ .-..++||.
T Consensus 85 ~~nFSIsFWiRipk~~~~~~~~neytII~~~~-nNsGWkIsl~~n~iiwtL~D~ngn~k~i~f~Y~~~~~isdyiNkW~f 163 (444)
T 2vu9_A 85 YENFSTSFWIRIPKYFNSISLNNEYTIINCME-NNSGWKVSLNYGEIIWTLQDTQEIKQRVVFKYSQMINISDYINRWIF 163 (444)
T ss_dssp SCCEEEEEEEECCCCCSGGGTTCCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTSCEEEEEEECCSBSSSCSSTTSCEE
T ss_pred ccceEEEEEEecCCcccccccCcceEEEEecc-CCCCcEEEEecCcEEEEEEeCCCCeeEEEEeeccccchhhhhcceEE
Confidence 57899999999976533201223467886554 78999999999999998887777665443331 111299999
Q ss_pred EEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCCcceeE--eCCCCCCCCCccceEeccceeEecCCCCHHHHHHH
Q psy14029 175 IAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPFDKCY--IGATPELDEERVFCGQMAAIYLFNESLSTHQICAM 252 (277)
Q Consensus 175 lavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~~~~~--IG~~~~~~~~~~f~g~lg~~~lf~~aLs~~~I~~i 252 (277)
|+|+.++ -....+||||+++.+.++...-.+...-.... +|...+ ... =-|-.+.||+.+|+++||..+
T Consensus 164 ITITndR----L~n~~IyINg~Li~~~~I~~lgnI~~sn~I~fkl~~~nd~---~~~--i~I~~f~IfnkeL~~~EI~~l 234 (444)
T 2vu9_A 164 VTITNNR----LNNSKIYINGRLIDQKPISNLGNIHASNNIMFKLDGCRDT---HRY--IWIKYFNLFDKELNEKEIKDL 234 (444)
T ss_dssp EEEEECT----TSEEEEEETTEEEEEEECTTCCCEECCSEEEEEEESCCCT---TCE--EEEEEEEEESSCCCHHHHHHH
T ss_pred EEEEccc----ccceeEEECCEEeeccchhhhhcceecceEEEEecCCCCC---Cce--EEEeeeeeecccCCHHHHHHH
Confidence 9999985 33449999999999988752222211111112 455422 112 257889999999999999999
Q ss_pred HhCCC
Q psy14029 253 HRLGP 257 (277)
Q Consensus 253 y~lGp 257 (277)
|.--|
T Consensus 235 Y~~~~ 239 (444)
T 2vu9_A 235 YDNQS 239 (444)
T ss_dssp HHHHH
T ss_pred Hhhcc
Confidence 97443
No 14
>3n7l_A Neurotoxin; HCR/D-SA, ganglioside binding loop; 2.00A {Clostridium botulinum} PDB: 3azw_A 3azv_A 3n7m_A 4fvv_A* 3n7k_A 3r4s_A* 3r4u_A
Probab=98.98 E-value=5.9e-08 Score=85.96 Aligned_cols=147 Identities=15% Similarity=0.250 Sum_probs=98.9
Q ss_pred CCceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCCeEEEEEeCCeEEEEEeeecCcceeeeeeeE------EeCCcEEE
Q psy14029 101 ENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGVGYTAHFVGNCLVLTSMKIKGKGFQHCVKYE------FQPRKWYM 174 (277)
Q Consensus 101 ~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~g~e~~~~~~~lvv~~~~~~~~~~~~~~~~~------~~~~~W~h 174 (277)
.+.||+++|+|+....+. ...-+|+... .+++|.++++.+++++.+..+..|++....+.+. =. ++|+.
T Consensus 70 y~nFSIsFWiRi~k~~~n---~~nytII~~~-~nNsGWkI~~~~n~iiwtL~D~ngn~k~i~fsY~~~~~isdy-NkW~f 144 (424)
T 3n7l_A 70 YESFSISFWIRINKWVSN---LPGYTIIDSV-KNNSGWSIGIISNFLVFTLKQNENSEQDINFSYDISKNAAGY-NKWFF 144 (424)
T ss_dssp TTEEEEEEEEEEETCCTT---CCCEEEEEEE-SSSCEEEEEEETTEEEEEEEEETTEEEEEEEECCGGGCTTCC-CSCEE
T ss_pred ccceEEEEEEEccccccC---CCccEEEeee-cCCCceEEEEecCcEEEEEEeCCCCeEEEEEecccccccccc-ccEEE
Confidence 478999999999988552 1235666655 4789999999999999998887776654433211 11 89999
Q ss_pred EEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCC--cceeEeCCCC----CCCCCccceEeccceeEecCCCCHHH
Q psy14029 175 IAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEP--FDKCYIGATP----ELDEERVFCGQMAAIYLFNESLSTHQ 248 (277)
Q Consensus 175 lavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~--~~~~~IG~~~----~~~~~~~f~g~lg~~~lf~~aLs~~~ 248 (277)
|+|+.++ -....+||||+++.+.++...-.+... ...--.|+.. +.+...... -|-.+.||+.+|++++
T Consensus 145 ITITnnr----l~n~~IyINg~Li~~~~I~~l~nI~~sn~I~f~~~~c~~~~~~~~~d~~~~i-~I~~f~If~keL~~~E 219 (424)
T 3n7l_A 145 VTITTNM----MGNMMIYINGKLIDTIKVKELTGINFSKTITFQMNKIPNTGLITSDSDNINM-WIRDFYIFAKELDDKD 219 (424)
T ss_dssp EEEEEET----TSEEEEEETTEEEEEEECCCCTTCCCCSEEEEEEEECTTSCCCC----CCEE-EEEEEEEESSCCCHHH
T ss_pred EEEEccc----cccceEEECCEEecchhhhhhcceeeccEEEEEecCCcccccccccCCCceE-EEEeeeeecccCCHHH
Confidence 9999985 334599999999999887532222111 1111122221 111121222 5778999999999999
Q ss_pred HHHHHhCCC
Q psy14029 249 ICAMHRLGP 257 (277)
Q Consensus 249 I~~iy~lGp 257 (277)
|..+|.--+
T Consensus 220 I~~lY~s~~ 228 (424)
T 3n7l_A 220 INILFNSLQ 228 (424)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHhccc
Confidence 999997544
No 15
>3pme_A Type C neurotoxin; structural genomics, seattle structural genomics center for infectious disease, ssgcid, botulinum neurotoxin; 1.56A {Clostridium botulinum} PDB: 4f83_A* 3ogg_A 3n7j_A 3obr_A 3obt_A* 3rmx_A 3rmy_A
Probab=98.93 E-value=3.1e-08 Score=87.58 Aligned_cols=144 Identities=14% Similarity=0.200 Sum_probs=97.4
Q ss_pred CCceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCCeEEEEEeCCeEEEEEeeecCcceeeeeeeE------EeCCcEEE
Q psy14029 101 ENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGVGYTAHFVGNCLVLTSMKIKGKGFQHCVKYE------FQPRKWYM 174 (277)
Q Consensus 101 ~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~g~e~~~~~~~lvv~~~~~~~~~~~~~~~~~------~~~~~W~h 174 (277)
.+.||+|+|+|+....++ .....+|+... .+++|.+++|..++++.+..+..|++....+.+. =..++|+.
T Consensus 66 y~nFSIsFWlRipk~~~n--~~neytII~s~-~nNsGWkIsl~~n~iIwtL~D~ngn~k~I~fsY~~~~~isdyiNkW~f 142 (420)
T 3pme_A 66 YENSSVSFWIKISKDLTN--SHNEYTIINSI-KQNSGWKLCIRNGNIEWILQDINRKYKSLIFDYSESLSHTGYTNKWFF 142 (420)
T ss_dssp GTEEEEEEEEEECHHHHT--CCSEEEEEEEE-ETTEEEEEEEETTEEEEEEECTTSCEEEEEEECSTTTCTTSCTTSCEE
T ss_pred ccceEEEEEEEccccccc--CCcceEEEEEe-cCCCceEEEEecCcEEEEEEeCCCCeeEEEEeehhccchhhhccceEE
Confidence 468999999999654321 11235677655 4789999999999999998887776654433311 11289999
Q ss_pred EEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCCcceeEeC--CCCCCCCCccceEeccceeEecCCCCHHHHHHH
Q psy14029 175 IAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPFDKCYIG--ATPELDEERVFCGQMAAIYLFNESLSTHQICAM 252 (277)
Q Consensus 175 lavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~~~~~IG--~~~~~~~~~~f~g~lg~~~lf~~aLs~~~I~~i 252 (277)
|+|+.++ -....+||||+++.+.++...-.+...- ...+. ++. +..... -|-.+.||+.+|+++||..+
T Consensus 143 ITITnnR----L~n~~IyINg~Li~~~~I~~L~nI~~Sn-~I~fki~~~~--d~n~~i--~I~~f~IfnkeL~~~EI~~l 213 (420)
T 3pme_A 143 VTITNNI----MGYMKLYINGELKQSERIEDLDEVKLDK-TIVFGIDENI--DENQML--WIRDFNIFSKELSNEDINIV 213 (420)
T ss_dssp EEEEEET----TSEEEEEETTEEEEEEECTTSCCCCCCS-EEEESCCSCC--CTTCCE--EEEEEEEESSCCCHHHHHHH
T ss_pred EEEEccc----cccceEEECCEEecchhhhhhcceeecc-EEEEEEcCCC--CCCcEE--EEEeeEeecccCCHHHHHHH
Confidence 9999985 3344999999999998875322221111 11222 222 111222 57788999999999999999
Q ss_pred HhCC
Q psy14029 253 HRLG 256 (277)
Q Consensus 253 y~lG 256 (277)
|.--
T Consensus 214 Y~s~ 217 (420)
T 3pme_A 214 YEGQ 217 (420)
T ss_dssp HHHH
T ss_pred Hhcc
Confidence 9643
No 16
>3ffz_A Botulinum neurotoxin type E; botulinum neurotoxin serotype E, botulism, domain organization, endopeptidase, translocation, hydrolase; 2.65A {Clostridium botulinum}
Probab=98.88 E-value=1.9e-07 Score=92.41 Aligned_cols=160 Identities=14% Similarity=0.247 Sum_probs=107.7
Q ss_pred CCceeEEEEEEecCCCCCCCC-CCCceEEEEEeCCCCeEEEEEeCCeEEEEEeeecCcceeeeee------eEEeCCcEE
Q psy14029 101 ENGFTFTTWFRLDPINSVNIE-REKPYLYSFKTSKGVGYTAHFVGNCLVLTSMKIKGKGFQHCVK------YEFQPRKWY 173 (277)
Q Consensus 101 ~~GfTfs~Wi~le~~~~~~~~-~~~~~Lfs~~~~~g~g~e~~~~~~~lvv~~~~~~~~~~~~~~~------~~~~~~~W~ 173 (277)
.+.||+|+|+|+-..+...+. ....+|++....+++|.++++.+++++.+..++.|+.....+. ..=..++||
T Consensus 912 ~~nFSIsFWiRipk~~~~~in~~nEytII~~~~~nNsGWkI~l~~n~iiwtl~D~ngn~k~i~f~y~~~~~isdyiNkW~ 991 (1252)
T 3ffz_A 912 YKNFSISFWVRIPNYDNKIVNVNNEYTIINCMRDNNSGWKVSLNHNEIIWTLQDNAGINQKLAFNYGNANGISDYINKWI 991 (1252)
T ss_dssp CCCCEEEEEEECCCCCSTTTCCCCCEEEEEEEETTTEEEEEEEETTEEEEEEECSSSCEEEEEEECCCCSBCCSSTTSCE
T ss_pred ccceeEEEEEEcCCcCccccccCCceeEEeeccCCCCCcEEEEecCeEEEEEEeCCCCeeeEEEecccccchhhhhcceE
Confidence 578999999999766422111 2335788777678899999999999999888777766544332 111128999
Q ss_pred EEEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCCccee--EeCCCCCCCCCccceEeccceeEecCCCCHHHHHH
Q psy14029 174 MIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPFDKC--YIGATPELDEERVFCGQMAAIYLFNESLSTHQICA 251 (277)
Q Consensus 174 hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~~~~--~IG~~~~~~~~~~f~g~lg~~~lf~~aLs~~~I~~ 251 (277)
.|+|+.++ + ....+||||+++.+.++...-.+...-... -+|..-. .. -.|-.+.||+.+|+.++|..
T Consensus 992 fITITnnR--L--~~~~IyINg~Li~~~~I~~l~nI~~sn~I~fki~~~~d~-----~~-i~I~~f~Ifnkel~~~EI~~ 1061 (1252)
T 3ffz_A 992 FVTITNDR--L--GDSKLYINGNLIDQKSILNLGNIHVSDNILFKIVNCSYT-----RY-IGIRYFNIFDKELDETEIQT 1061 (1252)
T ss_dssp EEEEEECT--T--SEEEEEETTEEEEEEECTTCCCCCCCSEEEEEEESCSSC-----CE-EEEEEEEEESSCCCHHHHHH
T ss_pred EEEEEecc--C--ccceEEECCEEeeccchhhhccceecceEEEEeccCCCC-----ce-EEEeeeeeecccCCHHHHHH
Confidence 99999985 3 344999999999998875222221111111 2444321 12 25778999999999999999
Q ss_pred HHhCCCCCccCCCCCcccCcccccCC
Q psy14029 252 MHRLGPGYKVKTGWVEELNSSWGEEL 277 (277)
Q Consensus 252 iy~lGp~y~~~fq~~~~~~~~~~~~~ 277 (277)
+|.--|+ .+-+--.|++.|
T Consensus 1062 lY~~~~~-------~s~lkD~wGn~L 1080 (1252)
T 3ffz_A 1062 LYSNEPN-------TNILKDFWGNYL 1080 (1252)
T ss_dssp HHTTSSC-------TTBCBBSSSSBC
T ss_pred HHHhccC-------cchhhhccCCcc
Confidence 9975554 334555566543
No 17
>2vxr_A Botulinum neurotoxin type G; hydrolase, ganglioside, protease, recepto secreted, binding domain, metalloprotease; 1.90A {Clostridium botulinum} PDB: 3mpp_G
Probab=98.88 E-value=2.4e-08 Score=89.83 Aligned_cols=147 Identities=18% Similarity=0.330 Sum_probs=98.7
Q ss_pred CCceeEEEEEEecCCCCCCCC---CCCceEEEEEeCCCCeEEEEEeCCeEEEEEeeecCcceeeeeeeE----E--eCCc
Q psy14029 101 ENGFTFTTWFRLDPINSVNIE---REKPYLYSFKTSKGVGYTAHFVGNCLVLTSMKIKGKGFQHCVKYE----F--QPRK 171 (277)
Q Consensus 101 ~~GfTfs~Wi~le~~~~~~~~---~~~~~Lfs~~~~~g~g~e~~~~~~~lvv~~~~~~~~~~~~~~~~~----~--~~~~ 171 (277)
.+.||+|+|+|+-......+. ...-+|++... +++|.+++|.+++++.+..++.|++....+.+. + ..++
T Consensus 113 y~nFSIsFWlRipk~~~~~i~~y~~nEytII~~~~-nNsGWkIsl~~n~iIwtL~D~ngn~k~I~f~Y~~~~~isDyiNk 191 (482)
T 2vxr_A 113 FDNFSINFWVRTPKYNNNDIQTYLQNEYTIISCIK-NDSGWKVSIKGNRIIWTLIDVNAKSKSIFFEYSIKDNISDYINK 191 (482)
T ss_dssp SCCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEEE-TTEEEEEEEETTEEEEEEECTTSCEEEEEEECCSCCSSCSSTTS
T ss_pred ccceEEEEEEEcCCcccchhhcccCCceEEEEEec-CCCccEEEEecCcEEEEEEeCCCCeeEEEEecccccchhhhhcc
Confidence 578999999999665321111 12246775443 789999999999999998887776654433311 1 1289
Q ss_pred EEEEEEEEEeccCCCCeEEEEECCEEeeeeecccccccC--CCcceeEeCCCCCCCCCccceEeccceeEecCCCCHHHH
Q psy14029 172 WYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTN--EPFDKCYIGATPELDEERVFCGQMAAIYLFNESLSTHQI 249 (277)
Q Consensus 172 W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~--~~~~~~~IG~~~~~~~~~~f~g~lg~~~lf~~aLs~~~I 249 (277)
|+.|+|+.++ -....+||||+++.+.++...-.+. .....--.|+... .... -|-.+.||+.+|+++||
T Consensus 192 W~fVTITnnR----L~n~~IYINg~Li~~~~I~~L~nI~~Sn~I~fkld~c~d~---n~~i--~I~~f~IfnkeL~~~EI 262 (482)
T 2vxr_A 192 WFSITITNDR----LGNANIYINGSLKKSEKILNLDRINSSNDIDFKLINCTDT---TKFV--WIKDFNIFGRELNATEV 262 (482)
T ss_dssp CEEEEEEECT----TSEEEEEETTEEEEEEECTTCCCEECCSEEEEEEESCCCT---TCEE--EEEEEEEESSCCCHHHH
T ss_pred eEEEEEEccc----cccceEEECCEEecchhhhhhhceeecceEEEEEcccCCC---CcEE--EEEeeeeecccCCHHHH
Confidence 9999999875 3344999999999998875222221 1111223444321 2222 57789999999999999
Q ss_pred HHHHhCCC
Q psy14029 250 CAMHRLGP 257 (277)
Q Consensus 250 ~~iy~lGp 257 (277)
..+|.--|
T Consensus 263 ~~lY~s~~ 270 (482)
T 2vxr_A 263 SSLYWIQS 270 (482)
T ss_dssp HHHHHHHT
T ss_pred HHHHhccc
Confidence 99997544
No 18
>3vuo_A NTNHA; protection of botulinum neurotoxin, botulinum neurotoxin, to; 3.90A {Clostridium botulinum}
Probab=98.84 E-value=1.2e-07 Score=94.42 Aligned_cols=138 Identities=15% Similarity=0.236 Sum_probs=97.3
Q ss_pred CCceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCCeEEEEEeCCeEEEEEeeecCcceeeeeeeEEeCCcEEEEEEEEE
Q psy14029 101 ENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGVGYTAHFVGNCLVLTSMKIKGKGFQHCVKYEFQPRKWYMIAIVYI 180 (277)
Q Consensus 101 ~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~g~e~~~~~~~lvv~~~~~~~~~~~~~~~~~~~~~~W~hlavv~~ 180 (277)
...||+|+|||+...+. ....++... .+++|.++++.+++++.+-.++.|+.....+... ..++|+.|+|+.+
T Consensus 898 y~nFSISFWiRi~k~~~-----~~~~iI~~~-~nNSGWkIsl~~n~IIwtLqD~ngn~k~i~fs~~-i~NkW~FVTITnn 970 (1196)
T 3vuo_A 898 TNNFTICFWLRFTGKDD-----DKTRLIGNK-VNNCGWEIYFEDNGLVFEIIDSNGNQESVYLSNV-INNNWYYISISVD 970 (1196)
T ss_dssp SCCEEEEEEEEECCCCS-----SCEEEEEEE-CSSCEEEEEEETTEEEEEEECTTCCEEEEEECSC-TTSCCEEEEEEEE
T ss_pred ccceeEEEEEEccCCCC-----CceeEeeec-ccCCCcEEEEeCCcEEEEEEecCCceeeEEEeEe-ecceEEEEEEEec
Confidence 36799999999976543 234565544 3779999999999999988887776655443333 2389999999988
Q ss_pred eccCCCCeEEEEECCEEeeeeecccccccCCCcceeEeCCCCCCCCCccceEeccceeEecCCCCHHHHHHHHhCC
Q psy14029 181 YNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPFDKCYIGATPELDEERVFCGQMAAIYLFNESLSTHQICAMHRLG 256 (277)
Q Consensus 181 ~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~~~~~IG~~~~~~~~~~f~g~lg~~~lf~~aLs~~~I~~iy~lG 256 (277)
+ . +..+.+||||+++.+..+...-.+...-..-+++.. .+.| |-.+.||+.+|+.++|..+|.--
T Consensus 971 R--L-~~s~~IYING~Li~~~~I~~LgnI~~sn~I~~v~~n-------~~i~-Ir~F~IFnkeL~~~EI~~lY~~~ 1035 (1196)
T 3vuo_A 971 R--L-KDQLLIFINDKNVANVSIEQILNIYSTNVISLVNKN-------NSIY-VEELSVLDKPVASEEVIRNYFSY 1035 (1196)
T ss_dssp T--T-TTEEEEEETTEEEEEEECTTCCCCCCCSEEEECCCS-------SCEE-EEEEEEESSCCCHHHHHHHHHHH
T ss_pred c--c-CceeEEEECCEEecchhhhhhcceeecCeeEEecCC-------ceEE-EEeeEeecccCCHHHHHHHHhcC
Confidence 4 2 356899999999999887522222111111123222 3445 88999999999999999999743
No 19
>1za4_A Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cell adhesion; HET: SGN; 1.90A {Homo sapiens} SCOP: b.29.1.4 PDB: 2ouh_A 2ouj_A
Probab=98.68 E-value=8.7e-07 Score=76.62 Aligned_cols=130 Identities=13% Similarity=0.220 Sum_probs=90.2
Q ss_pred CceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCCe--EEEEEeC--CeEEEEEeeecCcce-eeeeeeEEeCCcEEEEE
Q psy14029 102 NGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGVG--YTAHFVG--NCLVLTSMKIKGKGF-QHCVKYEFQPRKWYMIA 176 (277)
Q Consensus 102 ~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~g--~e~~~~~--~~lvv~~~~~~~~~~-~~~~~~~~~~~~W~hla 176 (277)
.+|||.+|+|..+.. ...||++.+.+|.. +++...+ +.+.+.. .+.|+.. ..+.++.+.+++||+|+
T Consensus 72 ~eFsil~tlr~~~~~-------~g~LfsI~~~~g~~~ql~l~~~G~~~~l~~~Y-~~~g~~~~~~f~~~~L~Dg~WH~la 143 (251)
T 1za4_A 72 KGFLLLASLRQMKKT-------RGTLLALERKDHSGQVFSVVSNGKAGTLDLSL-TVQGKQHVVSVEEALLATGQWKSIT 143 (251)
T ss_dssp TEEEEEEEEEECTTC-------EEEEEEEEETTSSCEEEEEEEETTTTEEEEEE-EETTEEEEEEESSCCCCSSSCEEEE
T ss_pred CcEEEEEEEEecCCC-------CeEEEEEEeCCCCEEEEEEEECCCCcEEEEEE-EcCCCeeeEEEecccccCCCEEEEE
Confidence 899999999998754 34699998876533 3444433 3444332 2223322 22345678899999999
Q ss_pred EEEEeccCCCCeEEEEECCEEeeeeecccccccCC---C---cceeEeCCCCCCCCCccceEeccceeEecCCCCHHHH
Q psy14029 177 IVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNE---P---FDKCYIGATPELDEERVFCGQMAAIYLFNESLSTHQI 249 (277)
Q Consensus 177 vv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~---~---~~~~~IG~~~~~~~~~~f~g~lg~~~lf~~aLs~~~I 249 (277)
|... ...|++|||.+++.+..+. -|.... . -....||..... .. |.|.|-.+.|+.+ .+.++|
T Consensus 144 lsV~-----~~~VtLyvDC~~~~~~~l~-~~~~~i~~~~~~~~~~~~iGq~~~~--~~-F~G~lq~l~i~~~-~~~~~i 212 (251)
T 1za4_A 144 LFVQ-----EDRAQLYIDCEKMENAELD-VPIQSVFTRDLASIARLRIAKGGVN--DN-FQGVLQNVRFVFG-TTPEDI 212 (251)
T ss_dssp EEEE-----TTEEEEEETTSCCEEEECS-SCGGGTSCTTGGGTEEEEESCCSTT--CB-CCEEEEEEEEECS-CCHHHH
T ss_pred EEEE-----CCEEEEEECCcccceeecc-CccccccccccCCCcEEEEEecCCC--CC-CeEEeEEEEEEcC-CCHHHH
Confidence 9988 6789999999999998876 333221 1 235689988642 23 9999999999988 566666
No 20
>2erf_A Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sugar binding protein; 1.45A {Homo sapiens} SCOP: b.29.1.4 PDB: 2es3_A 1z78_A
Probab=98.60 E-value=3.3e-06 Score=71.00 Aligned_cols=130 Identities=12% Similarity=0.190 Sum_probs=90.5
Q ss_pred CceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCC--eEEEEEeC--CeEEEEEeeecCcceee-eeeeEEeCCcEEEEE
Q psy14029 102 NGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGV--GYTAHFVG--NCLVLTSMKIKGKGFQH-CVKYEFQPRKWYMIA 176 (277)
Q Consensus 102 ~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~--g~e~~~~~--~~lvv~~~~~~~~~~~~-~~~~~~~~~~W~hla 176 (277)
.+|||.+|+|..+.+. ..||++.+..+. -+++.+.+ +.+.+.. ...|+.... +.++.+..++||+|+
T Consensus 62 ~eFsi~~t~r~~~~~~-------~~LfsI~~~~~~~~ql~l~l~g~~~~l~~~y-~~~g~~~~~~f~~v~l~dg~WH~l~ 133 (209)
T 2erf_A 62 KGFLLLASLRQMKKTR-------GTLLALERKDHSGQVFSVVSNGKAGTLDLSL-TVQGKQHVVSVEEALLATGQWKSIT 133 (209)
T ss_dssp TEEEEEEEEEECTTCE-------EEEEEEEETTSSCEEEEEEEETTTTEEEEEE-EETTEEEEEEESSCCCCSSSEEEEE
T ss_pred CCEEEEEEEEcCCCCC-------ceEEEEEcCCCCEEEEEEEEcCCCCEEEEEE-cCCCCEEEEEEeccccCCCcEEEEE
Confidence 8999999999988643 479999987653 34555543 3454443 344433222 335668899999999
Q ss_pred EEEEeccCCCCeEEEEECCEEeeeeecccccccCC---C---cceeEeCCCCCCCCCccceEeccceeEecCCCCHHHH
Q psy14029 177 IVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNE---P---FDKCYIGATPELDEERVFCGQMAAIYLFNESLSTHQI 249 (277)
Q Consensus 177 vv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~---~---~~~~~IG~~~~~~~~~~f~g~lg~~~lf~~aLs~~~I 249 (277)
+... +..|++|||.+.+.+..+. -|..+. . -....||..... .. |.|.|-.+.|+-+. |-+.|
T Consensus 134 l~V~-----~~~v~L~vDC~~~~~~~l~-~~~~~~~~~~~~~~~~~~iGq~~~~--~~-F~G~lq~l~i~~~~-s~~~i 202 (209)
T 2erf_A 134 LFVQ-----EDRAQLYIDCEKMENAELD-VPIQSVFTRDLASIARLRIAKGGVN--DN-FQGVLQNVRFVFGT-TPEDI 202 (209)
T ss_dssp EEEE-----TTEEEEEETTTEEEEEECS-SCGGGTCCTTHHHHEEEEESCCTTT--CB-CCEEEEEEEEECSC-CHHHH
T ss_pred EEEE-----CCEEEEEEcCeEeEeEEcc-CCchhccccccCCceEEEEecCCCC--CC-CeEEeEEEEEECCC-CHHHH
Confidence 9988 6789999999999998876 333222 1 235679987642 23 99999999998765 44444
No 21
>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A
Probab=98.58 E-value=1.8e-06 Score=72.03 Aligned_cols=149 Identities=9% Similarity=0.057 Sum_probs=91.7
Q ss_pred EeecCCCcccEECCCC-------------CCCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeC--CCCeEEEEEeC
Q psy14029 80 FSFPGKKGSAMVLPPL-------------AKWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTS--KGVGYTAHFVG 144 (277)
Q Consensus 80 f~F~g~~~s~i~lp~~-------------~~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~--~g~g~e~~~~~ 144 (277)
..|+|. +++..|.. +.|.....+++++|||-...+ .-||..... ...-+.+.+.+
T Consensus 15 ~~F~G~--sy~~~~~~~~~~~~~l~~~~~~~~~~~~~~~is~~frT~~~~--------GlLl~~g~~~~~~dfl~l~L~~ 84 (204)
T 1pz7_A 15 IAFDGR--TYMEYHNAVTKSPDALDYPAEPSEKALQSNHFELSIKTEATQ--------GLILWSGKGLERSDYIALAIVD 84 (204)
T ss_dssp EEEESS--CCEEEECCSCCC-------CCSSCEEESEEEEEEEEEECCSS--------EEEEEESCCSTTCCEEEEEEET
T ss_pred eeECCc--eeEEEcCcccccccccccccccccccceeEEEEEEEEcCCCC--------eEEEEeCCCCCCCCeEEEEEEC
Confidence 456775 56666532 234333578999999976532 234432211 12345667778
Q ss_pred CeEEEEEeeecCcceeeeeeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeeccc-ccccCCCcceeEeCCCCC
Q psy14029 145 NCLVLTSMKIKGKGFQHCVKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAW-FVSTNEPFDKCYIGATPE 223 (277)
Q Consensus 145 ~~lvv~~~~~~~~~~~~~~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~-~p~~~~~~~~~~IG~~~~ 223 (277)
+.+.++...+.+. ........+.+|+||+|.|... ...+.++|||....+..... ...++ .....+||+.+.
T Consensus 85 G~l~~~~~~G~g~-~~v~s~~~lnDg~WH~V~v~r~-----~~~~~L~VD~~~~~~~~~~~~~~~l~-~~~~lylGG~p~ 157 (204)
T 1pz7_A 85 GFVQMMYDLGSKP-VVLRSTVPINTNHWTHIKAYRV-----QREGSLQVGNEAPITGSSPLGATQLD-TDGALWLGGMER 157 (204)
T ss_dssp TEEEEEEESSSCC-EEEEEEEECCSSSCEEEEEEEE-----TTEEEEEETTSCCEEEECCSSCCCEE-ECCEEEESSCSC
T ss_pred CEEEEEEECCCCe-EEEECCcccCCCCeEEEEEEEe-----CCEEEEEECCcceEEEECCCCCceEc-CCCCEEEecCCC
Confidence 8887765433222 2234457799999999999887 56899999998765443210 00111 123568999765
Q ss_pred CC--------CCccceEeccceeEecCCCC
Q psy14029 224 LD--------EERVFCGQMAAIYLFNESLS 245 (277)
Q Consensus 224 ~~--------~~~~f~g~lg~~~lf~~aLs 245 (277)
.. ....|.|.|..+.|-.+++.
T Consensus 158 ~~~~~~~~~~~~~~F~GCi~~l~in~~~~d 187 (204)
T 1pz7_A 158 LSVAHKLPKAYSTGFIGCIRDVIVDRQELH 187 (204)
T ss_dssp CSTTTTSCGGGGSBCEEEEEEEEETTEECC
T ss_pred cccccccccccCCCceEEEEEEEECCEEcc
Confidence 32 13579999999999776654
No 22
>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus}
Probab=98.53 E-value=3.8e-06 Score=69.31 Aligned_cols=150 Identities=16% Similarity=0.089 Sum_probs=93.6
Q ss_pred ceEeecCCCcccEECCCCCCCC--CCCceeEEEEEEecCCCCCCCCCCCceEEEEEe---CCCCeEEEEEeCCeEEEEEe
Q psy14029 78 VFFSFPGKKGSAMVLPPLAKWP--HENGFTFTTWFRLDPINSVNIEREKPYLYSFKT---SKGVGYTAHFVGNCLVLTSM 152 (277)
Q Consensus 78 ~ff~F~g~~~s~i~lp~~~~~p--~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~---~~g~g~e~~~~~~~lvv~~~ 152 (277)
....|+|. +.+.+|.....+ ....+++++|||-...+ .-|+.... ..+.-+.+.+.++.+.+...
T Consensus 10 ~~~~F~g~--syl~~~~~~~~~~~~~~~~~isl~frT~~~~--------GlLl~~~~~~~~~~d~l~l~L~~G~l~~~~~ 79 (189)
T 3pve_A 10 FLADFNGF--SYLELKGLHTFERDLGEKMALEMVFLARGPS--------GLLLYNGQKTDGKGDFVSLALHNRHLEFRYD 79 (189)
T ss_dssp CCEEEESS--CEEEECCGGGC-------CEEEEEEEESSSC--------EEEEEEESCC-CCSCEEEEEEETTEEEEEEE
T ss_pred eeeEECCC--ceEEEcCcccccccccceEEEEEEEEeCCCC--------EEEEEecCCCCCCCCeEEEEEECCEEEEEEe
Confidence 44678887 799998753222 23579999999976543 22444332 12334666777877777654
Q ss_pred eecCcceeeeeeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeeccc-ccccCCCcceeEeCCCCCCC------
Q psy14029 153 KIKGKGFQHCVKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAW-FVSTNEPFDKCYIGATPELD------ 225 (277)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~-~p~~~~~~~~~~IG~~~~~~------ 225 (277)
.+.+ .........+.+|+||||.|... ...+.++|||....+..... ...++ .....+||+.+...
T Consensus 80 ~G~g-~~~l~s~~~l~Dg~WH~V~v~r~-----~~~~~L~VD~~~~~~~~~~~~~~~l~-~~~~lyvGG~p~~~~~~~~~ 152 (189)
T 3pve_A 80 LGKG-AAIIRSKEPIALGTWVRVFLERN-----GRKGALQVGDGPRVLGESPVPHTMLN-LKEPLYVGGAPDFSKLARGA 152 (189)
T ss_dssp SSSC-EEEEECSSCCCTTSEEEEEEEEE-----TTEEEEEETTSCCEEEECCSSCCCCC-CCSCEEESCCSCGGGSCGGG
T ss_pred cCCC-CEEEEcCcccCCCCEEEEEEEEe-----CCEEEEEECCceeEeEEcCCCcceec-CCCCEEECCcCchhhccccc
Confidence 3332 22223456788999999999887 56899999998654443220 11111 12346899976421
Q ss_pred -CCccceEeccceeEecCCC
Q psy14029 226 -EERVFCGQMAAIYLFNESL 244 (277)
Q Consensus 226 -~~~~f~g~lg~~~lf~~aL 244 (277)
....|.|.|..+.+-.+.+
T Consensus 153 ~~~~~F~GCi~~v~ing~~l 172 (189)
T 3pve_A 153 AVASGFDGAIQLVSLRGHQL 172 (189)
T ss_dssp CCCSBCEEEEEEEEETTEEC
T ss_pred ccCCCCcEEceEEEECCEEc
Confidence 2457999999999977765
No 23
>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} PDB: 3sh5_A
Probab=98.51 E-value=8.8e-06 Score=67.44 Aligned_cols=146 Identities=14% Similarity=0.078 Sum_probs=93.1
Q ss_pred eEeecCCCcccEECCCC--CCCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEe-----C-CCCeEEEEEeCCeEEEE
Q psy14029 79 FFSFPGKKGSAMVLPPL--AKWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKT-----S-KGVGYTAHFVGNCLVLT 150 (277)
Q Consensus 79 ff~F~g~~~s~i~lp~~--~~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~-----~-~g~g~e~~~~~~~lvv~ 150 (277)
-..|+|. +++.+|.. ..+.....+++++|||-...+. -|+.... . .+.-+.+.+.++.+.+.
T Consensus 7 ~~~F~G~--syl~lp~~~~~~~~~~~~~~is~~frT~~~~G--------lLl~~~~~~~~~~~~~d~l~l~L~~G~l~~~ 76 (195)
T 3sh4_A 7 GAYFHDD--GFLAFPGHVFSRSLPEVPETIELEVRTSTASG--------LLLWQGVEVGEAGQGKDFISLGLQDGHLVFR 76 (195)
T ss_dssp EEEEEEE--EEEEECGGGGCCCSTTCCEEEEEEEEECCSSE--------EEEEECCCTTCTTSTTCEEEEEEETTEEEEE
T ss_pred cCEECCC--EEEEEccccccccccccceEEEEEEEeCCCCc--------EEEEecccccCCCCCCcEEEEEEeCCEEEEE
Confidence 3567787 79999863 1222245689999999766432 2433321 1 12246667778888776
Q ss_pred EeeecCcceeeeeeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeeccc-ccccCCCcceeEeCCCCCC-----
Q psy14029 151 SMKIKGKGFQHCVKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAW-FVSTNEPFDKCYIGATPEL----- 224 (277)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~-~p~~~~~~~~~~IG~~~~~----- 224 (277)
...+.+. ........+.+|+||||.|... ...+.++|||....+..... ...++ .....+||+.+..
T Consensus 77 ~~~G~g~-~~~~s~~~l~Dg~WH~V~v~r~-----~~~~~L~VD~~~~~~~~~~~~~~~l~-~~~~lyvGG~p~~~~~~~ 149 (195)
T 3sh4_A 77 YQLGSGE-ARLVSEDPINDGEWHRVTALRE-----GRRGSIQVDGEELVSGRSPGPNVAVN-AKGSVYIGGAPDVATLTG 149 (195)
T ss_dssp EECSSCE-EEEEEEEECCSSSCEEEEEEEE-----TTEEEEEETTCCCEEEECCSSCCCCC-CCSCEEESCCTTHHHHTT
T ss_pred EECCCCc-EEEEcCceeCCCCeEEEEEEEe-----CCEEEEEECCeeeeeeeCCCCccccc-CCCCEEECCCCCcccccc
Confidence 5433332 2234467789999999999887 57899999998765544320 11121 1235799998642
Q ss_pred -CCCccceEeccceeEec
Q psy14029 225 -DEERVFCGQMAAIYLFN 241 (277)
Q Consensus 225 -~~~~~f~g~lg~~~lf~ 241 (277)
.....|.|.|..+++=+
T Consensus 150 ~~~~~~F~GCi~~l~in~ 167 (195)
T 3sh4_A 150 GRFSSGITGCVKNLVLHS 167 (195)
T ss_dssp TSCCCCCSEEEEEEEEEE
T ss_pred cccccCCEEEEEEEEECC
Confidence 12467999999999954
No 24
>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus}
Probab=98.43 E-value=7e-06 Score=67.20 Aligned_cols=151 Identities=14% Similarity=0.117 Sum_probs=93.3
Q ss_pred eEeecCCCcccEECCCCCCCCC-CCceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCCeEEEEEeCCeEEEEEeeecCc
Q psy14029 79 FFSFPGKKGSAMVLPPLAKWPH-ENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGVGYTAHFVGNCLVLTSMKIKGK 157 (277)
Q Consensus 79 ff~F~g~~~s~i~lp~~~~~p~-~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~g~e~~~~~~~lvv~~~~~~~~ 157 (277)
-..|+|. +.+..+... -|. ...+++++|||-...+ --||.. ...+.-+.+.+.++.+.+......+.
T Consensus 7 ~~~F~G~--sy~~~~~~~-~~~~~~~~~isl~frT~~~~--------GlLl~~-g~~~d~l~l~L~~G~l~~~~~~G~g~ 74 (184)
T 2h0b_A 7 IATFKGS--EYFCYDLSQ-NPIQSSSDEITLSFKTLQRN--------GLMLHT-GKSADYVNLALKNGAVSLVINLGSGA 74 (184)
T ss_dssp EEEEESS--EEEEEECSS-SCEEESEEEEEEEEEESCSC--------EEEEEE-CCTTEEEEEEEETTEEEEEEEESSCE
T ss_pred eeEECCc--eEEEEcccc-CccccCccEEEEEEEeCCCC--------EEEEEe-CCCCCEEEEEEECCEEEEEEECCCCe
Confidence 3567887 677665421 111 2568999999976632 235433 22233456677788887765433321
Q ss_pred ceee--eeeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeeccc-ccccCCCcceeEeCCCCCC------CCCc
Q psy14029 158 GFQH--CVKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAW-FVSTNEPFDKCYIGATPEL------DEER 228 (277)
Q Consensus 158 ~~~~--~~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~-~p~~~~~~~~~~IG~~~~~------~~~~ 228 (277)
.... .....+.+|+||+|.|... ...+.++|||....+..... +..++ .....+||+.+.. ....
T Consensus 75 ~~~~~~~~~~~l~Dg~WH~V~v~r~-----~~~~~L~VD~~~~~~~~~~~~~~~l~-~~~~l~lGG~p~~~~~~~~~~~~ 148 (184)
T 2h0b_A 75 FEALVEPVNGKFNDNAWHDVKVTRN-----LRQVTISVDGILTTTGYTQEDYTMLG-SDDFFYVGGSPSTADLPGSPVSN 148 (184)
T ss_dssp EEEEECCSSSCSSSSSCEEEEEEEE-----TTEEEEEETTTEEEEEECSTTCCCEE-ECSEEEESCCTTGGGSTTCSCCC
T ss_pred EEEEEecCCcccCCCCeEEEEEEEe-----CCEEEEEEcCceeeeeECCCCceecc-CCCCEEECCCCccccCcCCcccC
Confidence 1111 2345688999999999876 56899999998876544220 01111 1135689998652 1245
Q ss_pred cceEeccceeEecCCCCHH
Q psy14029 229 VFCGQMAAIYLFNESLSTH 247 (277)
Q Consensus 229 ~f~g~lg~~~lf~~aLs~~ 247 (277)
.|.|.|..+.+-+.+++.+
T Consensus 149 ~F~GCi~~v~in~~~~~l~ 167 (184)
T 2h0b_A 149 NFMGCLKEVVYKNNDVRLE 167 (184)
T ss_dssp BCEEEEEEEEEEESSCEEC
T ss_pred CCEEEeeEEEECCEEcchh
Confidence 7999999999988886533
No 25
>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus}
Probab=98.42 E-value=4.3e-06 Score=68.54 Aligned_cols=146 Identities=18% Similarity=0.210 Sum_probs=92.1
Q ss_pred ceEeecCCCcccEE--CCCCCCCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEe-CCCCeEEEEEeCCeEEEEEeee
Q psy14029 78 VFFSFPGKKGSAMV--LPPLAKWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKT-SKGVGYTAHFVGNCLVLTSMKI 154 (277)
Q Consensus 78 ~ff~F~g~~~s~i~--lp~~~~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~-~~g~g~e~~~~~~~lvv~~~~~ 154 (277)
.-+.|+|. +.+. +|.. +....+++++|||-...+ --||.... ..+.-+.+.+.++.+.++....
T Consensus 6 ~~~~F~G~--sy~~~~~~~~---~~~~~~~isl~FrT~~~~--------GlLl~~~~~~~~d~l~L~L~~G~l~~~~~~G 72 (182)
T 2r16_A 6 TVLSYDGS--MFMKIQLPVV---MHTEAEDVSLRFRSQRAY--------GILMATTSRDSADTLRLELDAGRVKLTVNLG 72 (182)
T ss_dssp CEEEEESS--CCEEEEEEEE---EEESEEEEEEEEECSCSS--------EEEEEEECSSSCCEEEEEEETTEEEEEEESS
T ss_pred ccEEECCC--ceEEEECCCc---CCccceEEEEEEEECCCC--------EEEEEeCCCCCCCEEEEEEECCEEEEEEECC
Confidence 34678887 5655 4432 335679999999966532 23554433 2234567778888888775433
Q ss_pred cCcceeeeeeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeeccc-ccccCCCcceeEeCCCCCCC----CCcc
Q psy14029 155 KGKGFQHCVKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAW-FVSTNEPFDKCYIGATPELD----EERV 229 (277)
Q Consensus 155 ~~~~~~~~~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~-~p~~~~~~~~~~IG~~~~~~----~~~~ 229 (277)
.+. ........+.+|+||+|.|... ...+.++|||..+.+..... ...++ ....+||+.+... ...+
T Consensus 73 ~~~-~~~~~~~~lnDg~WH~V~v~r~-----~~~~~L~VD~~~~~~~~~~g~~~~l~--~~~l~iGG~~~~~~~~~~~~~ 144 (182)
T 2r16_A 73 KGP-ETLFAGYNLNDNEWHTVRVVRR-----GKSLKLTVDDQQAMTGQMAGDHTRLE--FHNIETGIITERRYLSSVPSN 144 (182)
T ss_dssp SCC-EEEEECSSCCSSSCEEEEEEEE-----TTEEEEEETTCCEEEEECCSSCCCEE--EEEEEESSCCCCTTCSSCCCC
T ss_pred CCc-eEEEcCcccCCCCeEEEEEEEE-----CCEEEEEECCceeEeEECCCCccEEe--ccCeEECCcccccccCCCCCC
Confidence 322 2233456789999999999987 56899999998775543220 11111 1245799875421 1357
Q ss_pred ceEeccceeEecCCC
Q psy14029 230 FCGQMAAIYLFNESL 244 (277)
Q Consensus 230 f~g~lg~~~lf~~aL 244 (277)
|.|.|..+++=...+
T Consensus 145 F~GCi~~l~in~~~~ 159 (182)
T 2r16_A 145 FIGHLQSLTFNGMAY 159 (182)
T ss_dssp CEEEEEEEEETTEEH
T ss_pred CEEEEeEEEECCEEh
Confidence 999999999855553
No 26
>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} PDB: 3v65_A
Probab=98.42 E-value=9.6e-06 Score=66.97 Aligned_cols=151 Identities=11% Similarity=0.059 Sum_probs=92.4
Q ss_pred ceEeecCCCcccEECCCC----------CCCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeC--CCCeEEEEEeCC
Q psy14029 78 VFFSFPGKKGSAMVLPPL----------AKWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTS--KGVGYTAHFVGN 145 (277)
Q Consensus 78 ~ff~F~g~~~s~i~lp~~----------~~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~--~g~g~e~~~~~~ 145 (277)
.-+.|+|. +.+..+.. ..|.....+++++|||-...+ .-|+..... .+.-+.+.+.++
T Consensus 3 ~~~~F~G~--sy~~y~~~~~~~~~~~~~~~~~~~~~~~isl~frT~~~~--------GlLl~~~~~~~~~d~l~l~L~~G 72 (191)
T 3v64_A 3 ETLAFDGR--TYIEYLNAVIESELTNEIPAEKALQSNHFELSLRTEATQ--------GLVLWIGKAAERADYMALAIVDG 72 (191)
T ss_dssp CEEEEESS--CCEEEECSCCCHHHHCCCCCCEEESEEEEEEEEECSCSS--------EEEEEESCCSTTCCEEEEEEETT
T ss_pred ccceecCc--eeEEEccccccccccccccccccccceEEEEEEEeCCCC--------eEEEEeCCCCCCCcEEEEEEECC
Confidence 35778888 66665431 113335678999999976532 123332221 223456677777
Q ss_pred eEEEEEeeecCcceeeeeeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeeccc-ccccCCCcceeEeCCCCCC
Q psy14029 146 CLVLTSMKIKGKGFQHCVKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAW-FVSTNEPFDKCYIGATPEL 224 (277)
Q Consensus 146 ~lvv~~~~~~~~~~~~~~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~-~p~~~~~~~~~~IG~~~~~ 224 (277)
.+.++...+.+. ........+.+|+||+|.|... ...+.++|||....+...+. ...++ .....+||+.+..
T Consensus 73 ~l~~~~~~G~~~-~~l~s~~~v~Dg~WH~V~v~r~-----~~~~~L~VD~~~~~~~~~~~~~~~l~-~~~~lylGG~p~~ 145 (191)
T 3v64_A 73 HLQLSYDLGSQP-VVLRSTVKVNTNRWLRIRAHRE-----HREGSLQVGNEAPVTGSSPLGATQLD-TDGALWLGGLQKL 145 (191)
T ss_dssp EEEEEEESSSCC-EEEEEEEECTTSSCEEEEEEEE-----TTEEEEEETTSCCEEEECCTTCCCEE-ECSEEEESCCSSC
T ss_pred EEEEEEECCCcc-EEEecCccccCCCCEEEEEEEe-----CCEEEEEECCeeeEeEECCCCcceec-cCCceEEcccCcc
Confidence 777765433332 2233456789999999999887 56899999998655543320 11111 1135689997643
Q ss_pred C--------CCccceEeccceeEecCCCC
Q psy14029 225 D--------EERVFCGQMAAIYLFNESLS 245 (277)
Q Consensus 225 ~--------~~~~f~g~lg~~~lf~~aLs 245 (277)
. ....|.|.|..+.+=.+.+.
T Consensus 146 ~~~~~~~~~~~~~F~GCi~~l~in~~~l~ 174 (191)
T 3v64_A 146 PVGQALPKAYGTGFVGCLRDVVVGHRQLH 174 (191)
T ss_dssp CSSCCSCGGGTSBCEEEEEEEEETTEECC
T ss_pred cccccccccccCCceEEeeEEEECCEEcc
Confidence 2 13579999999998555543
No 27
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=98.16 E-value=5.9e-05 Score=69.02 Aligned_cols=142 Identities=15% Similarity=0.150 Sum_probs=88.7
Q ss_pred ecCCCcccEECCCCCCCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCCeEEEEEeCCeEEEEEeeecCcceee
Q psy14029 82 FPGKKGSAMVLPPLAKWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGVGYTAHFVGNCLVLTSMKIKGKGFQH 161 (277)
Q Consensus 82 F~g~~~s~i~lp~~~~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~g~e~~~~~~~lvv~~~~~~~~~~~~ 161 (277)
|+|. +.+.+. ..|+....++++++||-...+ -.|+......+.-+.+.+.++.+.++.....+.....
T Consensus 216 F~g~--gy~~~~--~~~~~~~~~~is~~frT~~~~--------GlLl~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~ 283 (394)
T 1dyk_A 216 FDGT--GFAKAV--GGFKVGLDLLVEFEFRTTRPT--------GVLLGVSSQKMDGMGIEMIDEKLMFHVDNGAGRFTAI 283 (394)
T ss_dssp EEEE--EEEECC--SSBCCBSEEEEEEEEEESCSC--------EEEEEEECSSSCEEEEEEETTEEEEEEESSSCCEEEE
T ss_pred eCCC--ceeEEc--CCcccCCceEEEEEEEeCCCC--------EEEEEecCCCCCEEEEEEECCEEEEEEECCCCcEEEE
Confidence 4554 444443 245656679999999976532 2465554333445677788888877754333221111
Q ss_pred e---eeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeeccc-ccccCCCcceeEeCCCCCCC------CCccce
Q psy14029 162 C---VKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAW-FVSTNEPFDKCYIGATPELD------EERVFC 231 (277)
Q Consensus 162 ~---~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~-~p~~~~~~~~~~IG~~~~~~------~~~~f~ 231 (277)
. ....+.+|+||+|.|... .+.+.++|||..+....... ...+ ......+||+.+... ....|.
T Consensus 284 ~~~~~~~~l~DG~WH~V~v~~~-----~~~~~L~VD~~~~~~~~~~~~~~~l-~~~~~lylGG~p~~~~~~~~~~~~~F~ 357 (394)
T 1dyk_A 284 YDAEIPGHMCNGQWHKVTAKKI-----KNRLELVVDGNQVDAQSPNSASTSA-DTNDPVFVGGFPGGLNQFGLTTNIRFR 357 (394)
T ss_dssp ECCCSTTSTTSSSCEEEEEEEE-----TTEEEEEETTEEEEEECCCTTCCCB-CCCBCCEESCCCTTCCCTTCSCCCCCE
T ss_pred EecCCCccccCCceEEEEEEEe-----CCEEEEEECCcccccccCCCcceec-ccCCCEEEcCCCccccccccccCCCCc
Confidence 1 134588999999999887 56899999999876543210 1111 122356899976531 245799
Q ss_pred EeccceeEec
Q psy14029 232 GQMAAIYLFN 241 (277)
Q Consensus 232 g~lg~~~lf~ 241 (277)
|.|..+.+-+
T Consensus 358 GCi~~v~in~ 367 (394)
T 1dyk_A 358 GCIRSLKLTK 367 (394)
T ss_dssp EEEEEEEEEC
T ss_pred eeeeEEEECC
Confidence 9999999965
No 28
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=98.13 E-value=0.00014 Score=66.07 Aligned_cols=152 Identities=17% Similarity=0.120 Sum_probs=96.5
Q ss_pred ceEeecCCCcccEECCCCCCCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeC-CCCeEEEEEeCCeEEEEEeeecC
Q psy14029 78 VFFSFPGKKGSAMVLPPLAKWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTS-KGVGYTAHFVGNCLVLTSMKIKG 156 (277)
Q Consensus 78 ~ff~F~g~~~s~i~lp~~~~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~-~g~g~e~~~~~~~lvv~~~~~~~ 156 (277)
..+.|.+...+.+.+|. ..|+....+++++|||-...+ --||-.... .+.-+.+.+.++.+.++...+.+
T Consensus 20 ~a~~Fg~~~~S~~~~~~-~~~~~~~~~~is~~frT~~~~--------GlLly~~~~~~~d~~~l~L~~G~l~~~~~~g~~ 90 (383)
T 2jd4_A 20 GAHQFGLSQNSHLVLPL-QQSDVRKRLQVQLSIRTFASS--------GLIYYVAHQNQMDYATLQLQEGRLHFMFDLGKG 90 (383)
T ss_dssp TCEECCSSTTCEEEEEC-CSCCCSSEEEEEEEEEECCSC--------EEEEEEECTTSSSEEEEEEETTEEEEEEECSSC
T ss_pred cccccCCCCCeeEEEeC-CchhcccceEEEEEEEcCCCC--------eEEEEeCCCCCCcEEEEEEECCEEEEEEECCCC
Confidence 34667654337777764 244556789999999976532 224433222 23346677788888776543332
Q ss_pred cceeeeeeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeeccc-ccccCCCcceeEeCCCCCCC-------CCc
Q psy14029 157 KGFQHCVKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAW-FVSTNEPFDKCYIGATPELD-------EER 228 (277)
Q Consensus 157 ~~~~~~~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~-~p~~~~~~~~~~IG~~~~~~-------~~~ 228 (277)
. ........+.+|+||+|.|... ...+.++|||.......... ...++ .....+||+.+... ...
T Consensus 91 ~-~~~~~~~~~~Dg~WH~V~v~r~-----~~~~~L~VD~~~~~~~~~~g~~~~l~-~~~~l~vGG~p~~~~~~~~~~~~~ 163 (383)
T 2jd4_A 91 R-TKVSHPALLSDGKWHTVKTEYI-----KRKAFMTVDGQESPSVTVVGKATTLD-VERKLYLGGLPSHYRARNIGTITH 163 (383)
T ss_dssp E-EEEECCCCCTTSSCEEEEEEEE-----TTEEEEEETTEECCCEECCSSCCCCC-CCSEEEESSCCTTCCCCSSCSCCS
T ss_pred e-EEEeCcceecCCCcEEEEEEEe-----CCEEEEEEcCccccceecCCCcceec-CCCCeEEeccCcccccccccccCC
Confidence 2 2223456788999999999887 56899999999876554210 11111 12457899976421 135
Q ss_pred cceEeccceeEecCCCC
Q psy14029 229 VFCGQMAAIYLFNESLS 245 (277)
Q Consensus 229 ~f~g~lg~~~lf~~aLs 245 (277)
.|.|.|..+.+-+..+.
T Consensus 164 ~F~GCi~~l~in~~~l~ 180 (383)
T 2jd4_A 164 SIPACIGEIMVNGQQLD 180 (383)
T ss_dssp BCCEEEEEEEETTEECC
T ss_pred CceEEeEEEEECCEEec
Confidence 79999999999877665
No 29
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=98.00 E-value=9.5e-05 Score=67.26 Aligned_cols=147 Identities=18% Similarity=0.153 Sum_probs=87.3
Q ss_pred EeecCCCcccEECCCCCCCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCCeEEEEEeCCeEEEEEeeecCcce
Q psy14029 80 FSFPGKKGSAMVLPPLAKWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGVGYTAHFVGNCLVLTSMKIKGKGF 159 (277)
Q Consensus 80 f~F~g~~~s~i~lp~~~~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~g~e~~~~~~~lvv~~~~~~~~~~ 159 (277)
..|+|. +.+.++. ..|+....++++++||-...+ --|+......+.-+.+.+.++.+.+....+.+...
T Consensus 201 ~~F~g~--sy~~~~~-~~~~~~~~~~isl~frT~~~~--------GlLl~~~~~~~d~l~l~L~~G~l~~~~~~g~g~~~ 269 (383)
T 2jd4_A 201 TFFEGS--GYAALVK-EGYKVRLDLQITLEFRTTSKN--------GVLLGISSAKVDAIGLEIVDGKVLFHVNNGAGRIT 269 (383)
T ss_dssp EEEEEE--EEEEEEE-EEECCBSCEEEEEEEEESCSC--------EEEEEEECSSSCEEEEEEETTEEEEEEESSSCEEE
T ss_pred ceECCC--eEEEEec-CccccCCceEEEEEEEeCCCC--------EEEEEecCCCCcEEEEEEECCEEEEEEECCCCcEE
Confidence 346665 4555521 134455678999999976532 23554433333456677778888776543332211
Q ss_pred eee---eeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeeccc-ccccCCCcceeEeCCCCCCC------CCcc
Q psy14029 160 QHC---VKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAW-FVSTNEPFDKCYIGATPELD------EERV 229 (277)
Q Consensus 160 ~~~---~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~-~p~~~~~~~~~~IG~~~~~~------~~~~ 229 (277)
... ....+.+|+||+|.|... .+.+.++|||..+.+..-.. ...+ ......+||+.+... ....
T Consensus 270 ~~~~~~~~~~l~DG~WH~V~l~~~-----~~~~~L~VD~~~~~~~~~~~~~~~l-~~~~~lylGG~p~~~~~~~~~~~~~ 343 (383)
T 2jd4_A 270 ATYQPRAARALCDGKWHTLQAHKS-----KHRIVLTVDGNSVRAESPHTHSTSA-DTNDPIYVGGYPAHIKQNSLSSRAS 343 (383)
T ss_dssp EEECCSSTTGGGSSSCEEEEEEEE-----TTEEEEEETTEEEEEC----CCCCB-CCCEEEEESCCCTTSCCTTCSCCCB
T ss_pred EEEecCCCccccCCCcEEEEEEEc-----CCEEEEEECCeecccccCCCCcccc-cCCCCEEEeccccccccCCccccCC
Confidence 111 124488999999999876 56899999999876542110 1112 122357899976421 2357
Q ss_pred ceEeccceeEecCC
Q psy14029 230 FCGQMAAIYLFNES 243 (277)
Q Consensus 230 f~g~lg~~~lf~~a 243 (277)
|.|.|..+.+-+.+
T Consensus 344 F~GCi~~v~in~~~ 357 (383)
T 2jd4_A 344 FRGCVRNLRLSRGS 357 (383)
T ss_dssp CEEEEEEEEEC---
T ss_pred CceEccEEEECCCC
Confidence 99999999996653
No 30
>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A*
Probab=97.98 E-value=0.0003 Score=56.83 Aligned_cols=124 Identities=6% Similarity=-0.034 Sum_probs=78.7
Q ss_pred CceeEEEEEEecCCCCCCCCCCCceEEEEEeCC-CCeEEEEEeCCeEEEEEeeecCcceeeeeeeEEeCCcEEEEEEEEE
Q psy14029 102 NGFTFTTWFRLDPINSVNIEREKPYLYSFKTSK-GVGYTAHFVGNCLVLTSMKIKGKGFQHCVKYEFQPRKWYMIAIVYI 180 (277)
Q Consensus 102 ~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~-g~g~e~~~~~~~lvv~~~~~~~~~~~~~~~~~~~~~~W~hlavv~~ 180 (277)
..+++++-||-...+ --|+-..... ..-+.+.+.++.+.++...+.+ .........+.+|+||+|.|...
T Consensus 26 ~~~~is~~FrT~~~~--------GlLly~~~~~~~df~~l~L~~G~l~~~~~~g~~-~~~~~s~~~vnDG~WH~V~v~~~ 96 (170)
T 1d2s_A 26 TKTSSSFEVRTWDPE--------GVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWA-QLTVGAGPRLDDGRWHQVEVKME 96 (170)
T ss_dssp CCCEEEEEEEESCSS--------EEEEEEEEETTTEEEEEEEETTEEEEEEESSSC-EEEEECSCCCCSSSCEEEEEEEE
T ss_pred CceEEEEEEEeCCCC--------EEEEEecCCCCCCEEEEEEeCCEEEEEEECCCc-eEEEeCCCccCCCCCEEEEEEEe
Confidence 456888877865532 2344333322 2335566778888776543322 22223355689999999999887
Q ss_pred eccCCCCeEEEEECCEEeeeeecccccccCCCcceeEeCCCCCC------CCCccceEeccceeEecCC
Q psy14029 181 YNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPFDKCYIGATPEL------DEERVFCGQMAAIYLFNES 243 (277)
Q Consensus 181 ~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~~~~~IG~~~~~------~~~~~f~g~lg~~~lf~~a 243 (277)
...+.+.|||....+..- .+.. +....+||+.+.. ....+|.|.|..+.+-++.
T Consensus 97 -----~~~~~L~VD~~~~~~~~~--~~~l--~~~~lylGG~p~~~~~~~~~~~~~F~GCi~~l~in~~~ 156 (170)
T 1d2s_A 97 -----GDSVLLEVDGEEVLRLRQ--VSGH--PIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWLDKQ 156 (170)
T ss_dssp -----TTEEEEEETTEEEEEETT--CCCC--CEEEEEESSCSSCGGGSSSCCCCCCCEEEEEEEESCGG
T ss_pred -----CCEEEEEECCeeeeeecc--CCCc--ccccEEEECcccchhhcccCCCCCeeeEeEEeEECCcc
Confidence 567999999998866432 1222 2356789997642 1235799999999886544
No 31
>2uur_A Collagen alpha-1(IX) chain; glycoprotein, hydroxylation, structural protein, NC4, collagen IX, polymorphism, extracellular matrix; 1.8A {Homo sapiens}
Probab=97.94 E-value=0.00013 Score=62.71 Aligned_cols=153 Identities=13% Similarity=0.197 Sum_probs=96.0
Q ss_pred cceEeecCCCcccEECCCCCCCC--CCCceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCC-eEEEEEeC--CeEEEEE
Q psy14029 77 DVFFSFPGKKGSAMVLPPLAKWP--HENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGV-GYTAHFVG--NCLVLTS 151 (277)
Q Consensus 77 ~~ff~F~g~~~s~i~lp~~~~~p--~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~-g~e~~~~~--~~lvv~~ 151 (277)
...+.|... .-|..|.-..+| ...+|||.+=+|+...+. +..-.||++.+.++. -+++-+.+ +.+.+..
T Consensus 61 ~~Ay~l~~~--a~l~~pt~~~fP~glp~eFsil~tlr~~~~~~----~~~~~L~sI~d~~~~~qlgv~l~g~~~~l~~~y 134 (245)
T 2uur_A 61 QVAYKLGNN--VDFRIPTRNLYPSGLPEEYSFLTTFRMTGSTL----KKNWNIWQIQDSSGKEQVGIKINGQTQSVVFSY 134 (245)
T ss_dssp CEEEEECSS--CCCEEEHHHHCTTCCCSSEEEEEEEECCGGGG----GCEEEEEEEECTTSCEEEEEEEEGGGTEEEEEE
T ss_pred ceeEEecCc--cccccchhHhccccCCCCEEEEEEEEcCCCCC----CcceEEEEEECCCCcEEEEEEEcCCCCEEEEEe
Confidence 456777665 345544322222 236899999999765432 112359999886553 23444443 3455544
Q ss_pred eeecCcceeeeeee--EEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeecccccccC-CCcceeEeCCCCCCCCCc
Q psy14029 152 MKIKGKGFQHCVKY--EFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTN-EPFDKCYIGATPELDEER 228 (277)
Q Consensus 152 ~~~~~~~~~~~~~~--~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~-~~~~~~~IG~~~~~~~~~ 228 (277)
....|+.....+.. .+..|+||+|++... ++.|++|||=+.+.+..+. |..+ ..-....||.... +...
T Consensus 135 ~~~~g~~q~v~F~~~~~L~Dg~WHklalsV~-----~~~VtLyvDC~~~~~~~l~--~~~~i~~~G~~~lG~~~~-~~~~ 206 (245)
T 2uur_A 135 KGLDGSLQTAAFSNLSSLFDSQWHKIMIGVE-----RSSATLFVDCNRIESLPIK--PRGPIDIDGFAVLGKLAD-NPQV 206 (245)
T ss_dssp EBTTSCEEEEEECCCGGGCSSSCEEEEEEEE-----TTEEEEEETTEEEEEEECC--CBCCCCCSSEEEEEEESS-CTTC
T ss_pred cCCCCCeeEEEecCCccccCCCEEEEEEEEE-----CCEEEEEEecCcccccccC--CCCccccCCEEEEEEecC-CCCC
Confidence 33444433332233 367899999999998 6789999999999998886 3221 2234556787632 2223
Q ss_pred cceEeccceeEecCC
Q psy14029 229 VFCGQMAAIYLFNES 243 (277)
Q Consensus 229 ~f~g~lg~~~lf~~a 243 (277)
+|.|.|-.+.|+-++
T Consensus 207 ~f~g~lQ~l~i~~dp 221 (245)
T 2uur_A 207 SVPFELQWMLIHCDP 221 (245)
T ss_dssp BCCEEEEEEEEESCT
T ss_pred ceEEEeEEEEEEcCc
Confidence 799999999999877
No 32
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=97.93 E-value=0.00056 Score=62.44 Aligned_cols=153 Identities=12% Similarity=0.082 Sum_probs=93.8
Q ss_pred eEeecCCCcccEECCCCCCCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeC-CCCeEEEEEeCCeEEEEEeeecCc
Q psy14029 79 FFSFPGKKGSAMVLPPLAKWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTS-KGVGYTAHFVGNCLVLTSMKIKGK 157 (277)
Q Consensus 79 ff~F~g~~~s~i~lp~~~~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~-~g~g~e~~~~~~~lvv~~~~~~~~ 157 (277)
-..|.+...+.+.++ +..+.....+++++|||-...+ --||-.-.. .+.-+.+.+.++.+.++.....+
T Consensus 35 a~~Fg~~~~s~~~~~-~~~~~~~~~~~is~~frT~~~~--------GlLly~~~~~~~dfi~l~L~~G~l~~~~~~g~g- 104 (394)
T 1dyk_A 35 SKQFGLSRNSHIAIA-FDDTKVKNRLTIELEVRTEAES--------GLLFYMARINHADFATVQLRNGFPYFSYDLGSG- 104 (394)
T ss_dssp CEECCSSTTCEEEEE-CCGGGGSSEEEEEEEEEECCSC--------EEEEEEECTTSSSEEEEEEETTEEEEEEESSSC-
T ss_pred ceecCCCCCcEEEEE-cCccccccceEEEEEEEeCCCC--------eEEEEcCCCCCCceEEEEEECCEEEEEEECCCC-
Confidence 345654433555554 2234445789999999976532 224332221 23346667778888776533322
Q ss_pred ceeeeeeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCCcceeEeCCCCCCC-------CCccc
Q psy14029 158 GFQHCVKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPFDKCYIGATPELD-------EERVF 230 (277)
Q Consensus 158 ~~~~~~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~~~~~IG~~~~~~-------~~~~f 230 (277)
.........+.+|+||+|.|... ...+.++|||.............++ .....+||+.+... ...+|
T Consensus 105 ~~~~~~~~~~~Dg~WH~V~v~r~-----~~~~~L~VD~~~~~~~~~g~~~~l~-~~~~l~vGG~p~~~~~~~~~~~~~~F 178 (394)
T 1dyk_A 105 DTSTMIPTKINDGQWHKIKIVRV-----KQEGILYVDDASSQTISPKKADILD-VVGILYVGGLPINYTTRRIGPVTYSL 178 (394)
T ss_dssp EEEEECCSCCCSSSCEEEEEEEE-----TTEEEEEETTEEEEEECSTTCCCCC-CCSEEEESSCCTTCCCCSSCSCCSBC
T ss_pred ceEEEcccccCCCCEEEEEEEEe-----CCEEEEEEcCcccceecCCCCceec-CCCCEEEcccCCcccccccccCCCCc
Confidence 22223456788999999999987 5689999999987654311011121 12357899976421 13479
Q ss_pred eEeccceeEecCCCCHH
Q psy14029 231 CGQMAAIYLFNESLSTH 247 (277)
Q Consensus 231 ~g~lg~~~lf~~aLs~~ 247 (277)
.|.|..+.+-++++.-.
T Consensus 179 ~GCi~~l~in~~~~~l~ 195 (394)
T 1dyk_A 179 DGCVRNLHMEQAPVDLD 195 (394)
T ss_dssp SEEEEEEEESSSCCCTT
T ss_pred cEeeeEEEECCEEecCC
Confidence 99999999988776543
No 33
>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} PDB: 2vh8_C 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A*
Probab=97.92 E-value=0.00031 Score=57.09 Aligned_cols=149 Identities=11% Similarity=0.005 Sum_probs=87.9
Q ss_pred CcceEeecCCCcccEECCCCC-CCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeC--CCCeEEEEEeCCeEEEEEe
Q psy14029 76 PDVFFSFPGKKGSAMVLPPLA-KWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTS--KGVGYTAHFVGNCLVLTSM 152 (277)
Q Consensus 76 p~~ff~F~g~~~s~i~lp~~~-~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~--~g~g~e~~~~~~~lvv~~~ 152 (277)
|..-+.|++.. +.+...-.. .-+...-+++++.||-...+ --|+..... .+.-+.+.+.++.+.++..
T Consensus 3 ~~t~~~F~~~~-s~l~y~~~~~~~~~~~~~~isl~FrT~~~~--------GlLl~~~~~~~~~dfi~l~L~~G~l~~~~~ 73 (178)
T 3bod_A 3 LGSTYIFSKGG-GQITYKWPPNDRPSTRADRLAIGFSTVQKE--------AVLVRVDSSSGLGDYLELHIHQGKIGVKFN 73 (178)
T ss_dssp CSCEEEEEEEE-EEEEEECCTTSCCCBSEEEEEEEEECCCSS--------EEEEEEEESSSSCCEEEEEEETTEEEEEEE
T ss_pred CceEEEECCCC-cEEEEECCCcCCCCccccEEEEEEEECCCC--------EEEEEEcCCCCCCCEEEEEEECCEEEEEEE
Confidence 45568886542 555432111 11223457888888854422 235443222 2334566777888877654
Q ss_pred eecCcceeeeeeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeecccccc---cCCCcceeEeCCCCCCCCCcc
Q psy14029 153 KIKGKGFQHCVKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVS---TNEPFDKCYIGATPELDEERV 229 (277)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~---~~~~~~~~~IG~~~~~~~~~~ 229 (277)
.+.+..........+.+|+||+|.|... ...+.+.|||....+.... -+. ++ .....+||+.+. ...
T Consensus 74 ~G~~~~~~~~~~~~vnDg~WH~V~v~r~-----~~~~~L~VD~~~~~~~~~~-~~~~~~l~-~~~~lylGG~p~---~~~ 143 (178)
T 3bod_A 74 VGTDDIAIEESNAIINDGKYHVVRFTRS-----GGNATLQVDSWPVIERYPA-GRQLTIFN-SQATIIIGGKEQ---GQP 143 (178)
T ss_dssp SSSCCEEEECCSSCCCSSSCEEEEEEEE-----TTEEEEEETTSCCEEECCC-SCCCCCBC-CEEEEEESCCTT---SCB
T ss_pred CCCCceEEecCCcCccCCCeEEEEEEEe-----CCEEEEEEeCCceeeeecC-CCcceEEe-CCCcEEEecccC---CCC
Confidence 3322211112345688999999999887 5689999999876544211 011 11 123578999875 358
Q ss_pred ceEeccceeEecCC
Q psy14029 230 FCGQMAAIYLFNES 243 (277)
Q Consensus 230 f~g~lg~~~lf~~a 243 (277)
|.|.|..+++=...
T Consensus 144 F~GCi~~v~in~~~ 157 (178)
T 3bod_A 144 FQGQLSGLYYNGLK 157 (178)
T ss_dssp CCEEEEEEEETTEE
T ss_pred CEEEEEEEEECCEe
Confidence 99999999985444
No 34
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=97.83 E-value=0.0003 Score=67.95 Aligned_cols=148 Identities=9% Similarity=0.017 Sum_probs=90.6
Q ss_pred ceEeecCCCcccEECCCCCCCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCCeEEEEEeCCeEEEEEeeecCc
Q psy14029 78 VFFSFPGKKGSAMVLPPLAKWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGVGYTAHFVGNCLVLTSMKIKGK 157 (277)
Q Consensus 78 ~ff~F~g~~~s~i~lp~~~~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~g~e~~~~~~~lvv~~~~~~~~ 157 (277)
.-..|.+. +.+.+|. |+....++++++||-...+ --|+........-+.+++.++.+.+....+.+.
T Consensus 388 ~~~~F~~~--g~~~~~~---~~~~~~~~i~~~FRT~~~~--------GlLl~~~~~~~~~l~l~L~~G~l~~~~~~g~~~ 454 (608)
T 2wjs_A 388 YTVSFPKP--GFVELAA---VSIDVGTEINLSFSTRNES--------GIILLGSGGGQAYYAIFLNKGRLEVHLSSGTRT 454 (608)
T ss_dssp TEEECSSS--CEEEECC---CCBCTTEEEEEEEEESCSS--------EEEEEEC---CCEEEEEEETTEEEEEEEC----
T ss_pred cccccCCC--CeEEecC---ccCCCCcEEEEEEEeCCCC--------eEEEEEcCCCCceEEEEEECCEEEEEEECCCCc
Confidence 34567765 6777764 3445678999999865432 235554332334467778888887765432221
Q ss_pred ce--eee-eeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCCcceeEeCCCCCCC------CCc
Q psy14029 158 GF--QHC-VKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPFDKCYIGATPELD------EER 228 (277)
Q Consensus 158 ~~--~~~-~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~~~~~IG~~~~~~------~~~ 228 (277)
.. ... ....+.+|+||+|.|... .+.+.++|||......... -... ......+||+.+... ...
T Consensus 455 ~~~~~l~~~~~~l~DG~WH~V~v~~~-----~~~~~L~VD~~~~~~~~~~-~~~~-l~~~~lylGG~p~~~~~~~~~~~~ 527 (608)
T 2wjs_A 455 MRKIVIKPEPNRFHDGREHSVHVERT-----RGIFTVQIDEDRRHMQNLT-EEQP-IEVKKLFVGGAPPEFQPSPLRNIP 527 (608)
T ss_dssp CEEEEECCCSSCSSSSSCEEEEEEEC-----SSEEEEEESSSCCEEEECC-CCSC-BCCSCEEESCCCC--------CCC
T ss_pred eeEEEEeCCCcccCCCCeEEEEEEEe-----CCEEEEEECCcccccccCC-cccc-cccCceEEeCCCccccccccccCC
Confidence 11 111 245688999999999876 5689999999887544332 1111 122457899986431 235
Q ss_pred cceEeccceeEecCCCC
Q psy14029 229 VFCGQMAAIYLFNESLS 245 (277)
Q Consensus 229 ~f~g~lg~~~lf~~aLs 245 (277)
.|.|.|..+.+-.+.++
T Consensus 528 ~F~GCi~~v~in~~~ld 544 (608)
T 2wjs_A 528 AFQGCVWNLVINSIPMD 544 (608)
T ss_dssp CCCEEEEEEEETTEECC
T ss_pred CCcEEEEEEEECCEEcc
Confidence 79999999998665543
No 35
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...
Probab=97.79 E-value=0.0012 Score=64.04 Aligned_cols=159 Identities=10% Similarity=0.115 Sum_probs=93.6
Q ss_pred ceEeecCCCcccEECCCCC-------CCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCC---eEEEEEeCCe-
Q psy14029 78 VFFSFPGKKGSAMVLPPLA-------KWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGV---GYTAHFVGNC- 146 (277)
Q Consensus 78 ~ff~F~g~~~s~i~lp~~~-------~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~---g~e~~~~~~~- 146 (277)
.=|.|.|.. ++-.=|.-. -|. +..||+.+=|-|+..+.. ...|.-....++. -+.+....++
T Consensus 465 ~g~~f~g~~-~~a~wpv~~~~~n~~y~f~-n~~ftlvatv~i~~~p~~-----~~pl~g~~~~~~~~~~~~glsy~~~~k 537 (648)
T 1ms9_A 465 NGLKFAGVG-GGALWPVSQQGQNQRYHFA-NHAFTLVASVTIHEVPKG-----ASPLLGASLDSSGGKKLLGLSYDKRHQ 537 (648)
T ss_dssp TEEEECSTT-CEEEEESGGGTTBCTTGGG-GTEEEEEEEEEECSCCSS-----CEEEEEEESSSSSSSEEEEEEECTTSC
T ss_pred CceEEecCC-CcEEeecCccCCceEEEEE-CceEEEEEEEEeccccCC-----CCceEEEEecCCCCcEEEEEEEeCCcc
Confidence 446776662 444434211 111 578999999999988753 2456555433221 2333444332
Q ss_pred EEEEEeeecCcceeeeeeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEe-eeeecccccccC-CCcceeEeCCCCCC
Q psy14029 147 LVLTSMKIKGKGFQHCVKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLA-SSTEMAWFVSTN-EPFDKCYIGATPEL 224 (277)
Q Consensus 147 lvv~~~~~~~~~~~~~~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~-~s~~l~~~p~~~-~~~~~~~IG~~~~~ 224 (277)
=.+.+. ++... ....-+|++=||+||+.. ..+.++||||+.+ .+..+. ..... ...+++|||++...
T Consensus 538 w~~~~~---~~~~~--~~~~we~~~~~qv~l~l~-----~~~~s~yvdg~~~~~~~~~~-~~~~~~~~ishfy~g~~~~~ 606 (648)
T 1ms9_A 538 WQPIYG---STPVT--PTGSWEMGKRYHVVLTMA-----NKIGSVYIDGEPLEGSGQTV-VPDERTPDISHFYVGGYKRS 606 (648)
T ss_dssp EEEEET---TSCCC--CBSCCCTTCEEEEEEEEE-----TTEEEEEETTEECTTCCEEC-SCSSCCCCCCEEEESSCSCT
T ss_pred EEEEeC---CCccc--ccccccCCcceEEEEEEe-----CCcEEEEECCEEecCCcccc-cccCCCcccceEEEcCCCCC
Confidence 111111 11100 112456788899999997 3489999999999 444443 22221 23568999997532
Q ss_pred CCCccceEeccceeEecCCCCHHHHHHHHh
Q psy14029 225 DEERVFCGQMAAIYLFNESLSTHQICAMHR 254 (277)
Q Consensus 225 ~~~~~f~g~lg~~~lf~~aLs~~~I~~iy~ 254 (277)
.......=-.-.|.|||++|+++||.+|..
T Consensus 607 ~~~~~~~vtv~nv~lynr~l~~~e~~~~~~ 636 (648)
T 1ms9_A 607 GMPTDSRVTVNNVLLYNRQLNAEEIRTLFL 636 (648)
T ss_dssp TSCCCCCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CcccCCCEEEEEeeEecCCCCHHHHhhhcc
Confidence 211112236778999999999999999974
No 36
>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A*
Probab=97.72 E-value=0.0016 Score=54.05 Aligned_cols=128 Identities=7% Similarity=-0.043 Sum_probs=80.3
Q ss_pred CceeEEEEEEecCCCCCCCCCCCceEEEEEeCCC-CeEEEEEeCCeEEEEEeeecCcceeeeeeeEEeCCcEEEEEEEEE
Q psy14029 102 NGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKG-VGYTAHFVGNCLVLTSMKIKGKGFQHCVKYEFQPRKWYMIAIVYI 180 (277)
Q Consensus 102 ~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g-~g~e~~~~~~~lvv~~~~~~~~~~~~~~~~~~~~~~W~hlavv~~ 180 (277)
..+++++-||-...+ --|+-.....+ .-+.+.+.++.+.++.....+ .........+.+|+||+|.|...
T Consensus 38 ~~~~is~~frT~~~~--------GlLly~~~~~~~d~~~l~L~~G~l~~~~~~g~~-~~~~~s~~~vnDG~WH~V~v~r~ 108 (205)
T 1f5f_A 38 TKTSSSFEVRTWDPE--------GVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWA-QLTVGAGPRLDDGRWHQVEVKME 108 (205)
T ss_dssp CCCEEEEEEEESCSS--------EEEEEEEEETTTEEEEEEEETTEEEEEEESSSC-EEEEECSCCCCSSSCEEEEEEEE
T ss_pred CceEEEEEEEeCCCC--------EEEEEeCCCCCCCEEEEEEECCEEEEEEECCCc-eEEEecCCccCCCCCEEEEEEEe
Confidence 347888877765532 23443333222 335566778888776543322 22223345689999999999887
Q ss_pred eccCCCCeEEEEECCEEeeeee-ccccccc--CCCcceeEeCCCCCC------CCCccceEeccceeEecCCC
Q psy14029 181 YNRWTKSEIKCFVNGQLASSTE-MAWFVST--NEPFDKCYIGATPEL------DEERVFCGQMAAIYLFNESL 244 (277)
Q Consensus 181 ~~~~~~s~v~lYvDG~l~~s~~-l~~~p~~--~~~~~~~~IG~~~~~------~~~~~f~g~lg~~~lf~~aL 244 (277)
...+.+.|||....+.. .. -|.. .......+||+.+.. ....+|.|.|..+.+.++.+
T Consensus 109 -----~~~~~L~VD~~~~~~~~~~~-~~~~~~~~~~~~lyiGG~p~~~~~~~~~~~~~F~GCi~~l~i~~~~~ 175 (205)
T 1f5f_A 109 -----GDSVLLEVDGEEVLRLRQVS-GPLTSKRHPIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWLDKQA 175 (205)
T ss_dssp -----TTEEEEEETTEEEEEECSCC-CCC----CCEEEEEESSCSSCGGGSSSCCCCCCCEEEEEEECSCGGG
T ss_pred -----CCEEEEEECCeeeeeeeccC-CCcccccCCCceEEEeCccCccccccccCCCCeeEEeeeeEECCeec
Confidence 56799999999877542 22 1211 112346789997642 22357999999999887763
No 37
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=97.68 E-value=0.0011 Score=61.09 Aligned_cols=146 Identities=12% Similarity=0.012 Sum_probs=83.6
Q ss_pred EeecCCCcccEECCCCCCCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeCC-CCeEEEEEeCCeEEEEEeeecCcc
Q psy14029 80 FSFPGKKGSAMVLPPLAKWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSK-GVGYTAHFVGNCLVLTSMKIKGKG 158 (277)
Q Consensus 80 f~F~g~~~s~i~lp~~~~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~-g~g~e~~~~~~~lvv~~~~~~~~~ 158 (277)
..|+|.....+..+. ++ ...++++++||-...+ --||-.-... +.-+.+.+.++.+.++.....+ .
T Consensus 43 ~~F~g~~~~~~~f~~---~~-~~~~~is~~FrT~~~~--------GlLly~~~~~~~df~~l~L~~G~l~~~~~~g~~-~ 109 (422)
T 1h30_A 43 RMFSGTPVIRLRFKR---LQ-PTRLVAEFDFRTFDPE--------GILLFAGGHQDSTWIVLALRAGRLELQLRYNGV-G 109 (422)
T ss_dssp C-----CCEEEECCB---SS-CCCCEEEEEEEECCSS--------EEEEEEESCTTSEEEEEEEETTEEEEEEEETTE-E
T ss_pred eEECCCceEEEEccC---CC-CCceEEEEEEEeCCCC--------eEEEEECCCCCCcEEEEEEECCEEEEEEECCCC-c
Confidence 367776323333332 33 4678999999976633 2344332212 2335667778888776543322 1
Q ss_pred eeeeeeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeeccc-ccccCC--CcceeEeCCCCCCC------CCcc
Q psy14029 159 FQHCVKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAW-FVSTNE--PFDKCYIGATPELD------EERV 229 (277)
Q Consensus 159 ~~~~~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~-~p~~~~--~~~~~~IG~~~~~~------~~~~ 229 (277)
........+.+|+||+|.|... ...+.+.|||..+.+..... .-.++. .....+||+.+... ....
T Consensus 110 ~~~~~~~~~nDg~WH~V~v~r~-----~~~~~L~VD~~~~~~~~~~g~~~~l~~~~~~~~lyvGG~p~~~~~~~~~~~~~ 184 (422)
T 1h30_A 110 RVTSSGPVINHGMWQTISVEEL-----ARNLVIKVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPR 184 (422)
T ss_dssp EEEEEEEECCSSCCEEEEEEEC-----SSEEEEEETTEEEEEEECCSCSSEEETTEEECEEEESSCSSCGGGSSSCCCCC
T ss_pred EEEecCceecCCCCEEEEEEEc-----CCEEEEEECCeeeEEeecCCcccccccccccceEEEecCcccccccccccCCC
Confidence 2223456799999999999876 56899999999876654321 001110 12356899976431 1357
Q ss_pred ceEeccceeEecCC
Q psy14029 230 FCGQMAAIYLFNES 243 (277)
Q Consensus 230 f~g~lg~~~lf~~a 243 (277)
|.|.|..+.+.+..
T Consensus 185 F~GCi~~v~i~~~~ 198 (422)
T 1h30_A 185 LDGCMRSWNWLNGE 198 (422)
T ss_dssp CCEEEEEEEEC---
T ss_pred CeEEEEEeEECCcc
Confidence 99999999997654
No 38
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=97.66 E-value=0.0021 Score=59.00 Aligned_cols=146 Identities=12% Similarity=0.087 Sum_probs=88.6
Q ss_pred EeecCCCcccEECCCCCCCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCCeEEEEEeCCeEEEEEeeecCcce
Q psy14029 80 FSFPGKKGSAMVLPPLAKWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGVGYTAHFVGNCLVLTSMKIKGKGF 159 (277)
Q Consensus 80 f~F~g~~~s~i~lp~~~~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~g~e~~~~~~~lvv~~~~~~~~~~ 159 (277)
+.|.+.. +++.+|.++ ....++++++||-...+ --|+-.....+.-+.+.+.++.+.++...+.|. .
T Consensus 8 v~F~~~~-Syl~~p~~~---~~~~~~is~~frT~~~~--------GlLly~~~~~~dfi~l~L~~G~l~~~~~~G~g~-~ 74 (410)
T 3asi_A 8 VTFKTKS-SYVALATLQ---AYTSMHLFFQFKTTSLD--------GLILYNSGDGNDFIVVELVKGYLHYVFDLGNGA-N 74 (410)
T ss_dssp EEECSTT-CEEEESCCC---CSSCEEEEEEEECSCSC--------EEEEEEEBSTTCEEEEEEETTEEEEEEESSSCE-E
T ss_pred cEeCCCC-eeEEeCCCC---CCceEEEEEEEEeCCCC--------eEEEEeCCCCCCEEEEEEECCEEEEEEECCCCc-E
Confidence 5676553 789988653 34578999999866532 123322222233466677788877765332221 1
Q ss_pred eee--eeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCCcceeEeCCCCCC---------CCCc
Q psy14029 160 QHC--VKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPFDKCYIGATPEL---------DEER 228 (277)
Q Consensus 160 ~~~--~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~~~~~IG~~~~~---------~~~~ 228 (277)
... ....+.+|+||+|.|.... ++.+.+.|||..+.+..-. ...++ .....+||+.+.. ....
T Consensus 75 ~~~~~s~~~vnDg~WH~V~v~r~~----~~~~~l~VD~~~~~~~~~~-~~~l~-~~~~lyvGG~p~~~~~~~~~~~~~~~ 148 (410)
T 3asi_A 75 LIKGSSNKPLNDNQWHNVMISRDT----SNLHTVKIDTKITTQITAG-ARNLD-LKSDLYIGGVAKETYKSLPKLVHAKE 148 (410)
T ss_dssp EEECCCSSCSCSSSCEEEEEEECT----TCEEEEEETTEEEEEECTT-CCCCC-BCSCEEESCCCGGGGGGSCTTCCCSS
T ss_pred EEEeccCcEeCCCCeEEEEEEEcC----CceEEEEECCEeceeccCC-cccee-cCCceEECccccchhhhhhhhccccc
Confidence 111 3456889999999998762 3357899999877553211 11111 1135689997642 1234
Q ss_pred cceEeccceeEecCCC
Q psy14029 229 VFCGQMAAIYLFNESL 244 (277)
Q Consensus 229 ~f~g~lg~~~lf~~aL 244 (277)
.|.|.|..+.+-.+.+
T Consensus 149 ~F~GCi~~l~ing~~~ 164 (410)
T 3asi_A 149 GFQGCLASVDLNGRLP 164 (410)
T ss_dssp BCCEEEEEEESSSCCC
T ss_pred CchhheeheeeCCccc
Confidence 6999999998865543
No 39
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=97.50 E-value=0.0016 Score=59.70 Aligned_cols=125 Identities=11% Similarity=0.010 Sum_probs=77.8
Q ss_pred CCceeEEEEEEecCCCCCCCCCCCceEEEEEeCC--CCeEEEEEeCCeEEEEEeeecCcceeee-eeeEEeCCcEEEEEE
Q psy14029 101 ENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSK--GVGYTAHFVGNCLVLTSMKIKGKGFQHC-VKYEFQPRKWYMIAI 177 (277)
Q Consensus 101 ~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~--g~g~e~~~~~~~lvv~~~~~~~~~~~~~-~~~~~~~~~W~hlav 177 (277)
....++++|||-... ..-|+...+.+ +.-+.+.+.++.+.+......+ ..... ....+..|+||+|.|
T Consensus 248 ~~~~~i~l~frT~~~--------~GlLl~~~~~~~~~~~l~l~L~~G~l~~~~~~g~~-~~~~~~~~~~l~DG~wH~V~v 318 (410)
T 3asi_A 248 TRADRLAIGFSTVQK--------EAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTD-DIAIEESNAIINDGKYHVVRF 318 (410)
T ss_dssp BSEEEEEEEEECCCS--------EEEEEEEEECTTCCCEEEEEEETTEEEEEEESSSS-CEEEECCSCCCCSSSCEEEEE
T ss_pred ceeeEEEEEEEeCCC--------CEEEEEEecCCCCCceEEEEEeCCEEEEEEECCCC-ceEEecCccCcCCCCeEEEEE
Confidence 345688888884332 12355544433 3346677777777776433322 12222 236789999999999
Q ss_pred EEEeccCCCCeEEEEECCEEeeeeeccccccc--CCCcceeEeCCCCCCCCCccceEeccceeEecCC
Q psy14029 178 VYIYNRWTKSEIKCFVNGQLASSTEMAWFVST--NEPFDKCYIGATPELDEERVFCGQMAAIYLFNES 243 (277)
Q Consensus 178 v~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~--~~~~~~~~IG~~~~~~~~~~f~g~lg~~~lf~~a 243 (277)
... ...+.++|||..+....... ... .......+||+.+. ...|.|.|..+++-..+
T Consensus 319 ~r~-----~~~~~L~VD~~~~~~~~~~g-~~~~~~~~~~~lylGG~p~---~~~F~GCi~~v~ing~~ 377 (410)
T 3asi_A 319 TRS-----GGNATLQVDSWPVIERYPAG-RQLTIFNSQATIIIGGKEQ---GQPFQGQLSGLYYNGLK 377 (410)
T ss_dssp EEE-----TTEEEEEETTSCCEEECCSS-CCCCCBCCEEEEEESSTTT---TCCCCEEEEEEEETTBC
T ss_pred EEE-----CCEEEEEECCcceecccCCC-ccceeeeccceEEECCccc---CCCCEEEEEEEEECCHH
Confidence 887 56899999998765442110 001 01223578999765 25899999999986554
No 40
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=97.37 E-value=0.0049 Score=59.41 Aligned_cols=150 Identities=15% Similarity=0.144 Sum_probs=89.7
Q ss_pred eEeecCCCcccEECCCCCCCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeCC-CCeEEEEEeCCeEEEEEeeecCc
Q psy14029 79 FFSFPGKKGSAMVLPPLAKWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSK-GVGYTAHFVGNCLVLTSMKIKGK 157 (277)
Q Consensus 79 ff~F~g~~~s~i~lp~~~~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~-g~g~e~~~~~~~lvv~~~~~~~~ 157 (277)
-+.|+|. +++.++....+. ...++++++||-...+ --||...+.+ +.-+.+.+.++.+.++...+.+.
T Consensus 205 ~~~F~g~--sy~~~~~~~~~~-~~~~~isl~FrT~~~~--------GlLl~~~~~~~~d~l~L~L~~G~l~~~~~~g~~~ 273 (608)
T 2wjs_A 205 TIQFDGE--GYALVSRPIRWY-PNISTVMFKFRTFSSS--------ALLMYLATRDLKDFMSVELSDGHVKVSYDLGSGM 273 (608)
T ss_dssp CEEEEEE--EEEEEECCTTCB-TTEEEEEEEEEESCSE--------EEEEEEECTTSSSEEEEEEETTEEEEEEECSSCE
T ss_pred ceEECCC--cceEEeccccCC-CcceEEEEEEEeCCCC--------eEEEEecCCCCCceEEEEEECCEEEEEEECCCCc
Confidence 3677776 566665311222 3678999999965532 2344333222 23466777888888775433222
Q ss_pred ceeeeeeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEE-----eeeeeccc-ccccCC-CcceeEeCCCCCCC-----
Q psy14029 158 GFQHCVKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQL-----ASSTEMAW-FVSTNE-PFDKCYIGATPELD----- 225 (277)
Q Consensus 158 ~~~~~~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l-----~~s~~l~~-~p~~~~-~~~~~~IG~~~~~~----- 225 (277)
........+.+|+||+|.|... ...+.++|||.. ........ ...++. .....+||+.+...
T Consensus 274 -~~l~s~~~~nDg~WH~V~v~r~-----~~~~~L~VD~~~~~~~~~~~~~~~g~~~~l~~~~~~~lylGG~p~~~~~~~~ 347 (608)
T 2wjs_A 274 -TSVVSNQNHNDGKWKAFTLSRI-----QKQANISIVDIDSNQEENVATSSSGNNFGLDLKADDKIYFGGLPTLRNLRPE 347 (608)
T ss_dssp -EEEEEEEECCSSSCEEEEEEEE-----TTEEEEEEEETTTCCEEEEEEECCSSCCCCCCCTTCEEEESCCCCCSCCCTT
T ss_pred -EEEEcCccccCCceEEEEEEEe-----cceEEEEEeccccccccccccccCCccccccccCCCceEEeccCcccccCcc
Confidence 2234456789999999999887 568999999732 11111110 011110 23467999976532
Q ss_pred -CCccceEeccceeEecCCCC
Q psy14029 226 -EERVFCGQMAAIYLFNESLS 245 (277)
Q Consensus 226 -~~~~f~g~lg~~~lf~~aLs 245 (277)
...+|.|.|..+.+-...+.
T Consensus 348 ~~~~~F~GCi~~v~in~~~~~ 368 (608)
T 2wjs_A 348 VNVKKYSGCLKDIEISRTPYN 368 (608)
T ss_dssp CCCCCCEEEEEEEEETTEEEC
T ss_pred cccCCceEEeeeEEECCEecC
Confidence 13579999999988665543
No 41
>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E*
Probab=97.19 E-value=0.012 Score=49.50 Aligned_cols=149 Identities=14% Similarity=0.089 Sum_probs=82.0
Q ss_pred CCcceEeecCCCcccEECCCCCCCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeC--CCCeEEEEEeCCeEEEEEe
Q psy14029 75 GPDVFFSFPGKKGSAMVLPPLAKWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTS--KGVGYTAHFVGNCLVLTSM 152 (277)
Q Consensus 75 ~p~~ff~F~g~~~s~i~lp~~~~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~--~g~g~e~~~~~~~lvv~~~ 152 (277)
+...-|.|+|. .-.+..|.... +...-..+++-||-...+ --|+-.... .+.-+.+.+.++.+.++..
T Consensus 38 gc~y~f~~~gs-~i~y~~~~~~~-~~~~~~~isl~FrT~~~~--------GlLl~~~~~~~~~dfi~L~L~~G~l~~~~~ 107 (226)
T 2r1d_A 38 GTTYIFSKGGG-QITYKWPPNDR-PSTRADRLAIGFSTVQKE--------AVLVRVDSSSGLGDYLELHIHQGKIGVKFN 107 (226)
T ss_dssp SSEEEEEEEEE-EEEEECCGGGC-CCBSEEEEEEEEECCCSS--------EEEEEEEECTTCCCEEEEEEETTEEEEEEE
T ss_pred CeEEEEecCCc-EEEEECCcccc-ccccccEEEEEEEeCCCC--------EEEEEecCCCCCCCEEEEEEECCEEEEEEE
Confidence 44445667763 12233443111 112345677666643321 234433222 2334566777888777654
Q ss_pred eecCcceeeeeeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeee-eccc-ccccCCCcceeEeCCCCCCCCCccc
Q psy14029 153 KIKGKGFQHCVKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASST-EMAW-FVSTNEPFDKCYIGATPELDEERVF 230 (277)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~-~l~~-~p~~~~~~~~~~IG~~~~~~~~~~f 230 (277)
.+.+..........+.+|+||+|.|... ...+.+.|||....+. .... +..++ .....+||+.+. ..+|
T Consensus 108 ~G~~~~~~~~~~~~vnDG~WH~V~v~r~-----~~~~~L~VD~~~~~~~~~~~~~~~~l~-~~~~lylGG~p~---~~~F 178 (226)
T 2r1d_A 108 VGTDDIAIEESNAIINDGKYHVVRFTRS-----GGNATLQVDSWPVIERYPAGRQLTIFN-SQATIIIGGKEQ---GQPF 178 (226)
T ss_dssp SSSCEEEEECCSSCCCSSSCEEEEEEEE-----TTEEEEEETTSCCEEECCSSCCCCCBC-SEEEEEESSTTT---TCCC
T ss_pred CCCCcEEEEeCCeEecCCCCEEEEEEEe-----CCEEEEEEcCccceEEecCCCcceecc-CCCeEEEccccC---CCCC
Confidence 3322111111235688999999999887 5689999999754322 1110 01111 123568999875 2589
Q ss_pred eEeccceeEecC
Q psy14029 231 CGQMAAIYLFNE 242 (277)
Q Consensus 231 ~g~lg~~~lf~~ 242 (277)
.|.|..+++=..
T Consensus 179 ~GCi~~v~ing~ 190 (226)
T 2r1d_A 179 QGQLSGLYYNGL 190 (226)
T ss_dssp CEEEEEEEETTB
T ss_pred eEEEeeEEECCE
Confidence 999999998443
No 42
>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} PDB: 3mw2_A* 3b3q_E* 3mw3_A*
Probab=97.10 E-value=0.013 Score=49.08 Aligned_cols=150 Identities=12% Similarity=0.082 Sum_probs=81.4
Q ss_pred CCCcceEeecCCCcccEE--CCCCCCCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeCC--CCeEEEEEeCCeEEE
Q psy14029 74 NGPDVFFSFPGKKGSAMV--LPPLAKWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSK--GVGYTAHFVGNCLVL 149 (277)
Q Consensus 74 ~~p~~ff~F~g~~~s~i~--lp~~~~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~--g~g~e~~~~~~~lvv 149 (277)
..+..-+.|.+.. +.+. .|+. .-+...-..+++-||-...+ --|+-..... +.-+.+.+.++.+.+
T Consensus 7 ~~~~t~~~F~~g~-s~l~y~~~~~-~~~~~~~~~isl~FrT~~~~--------GlLly~~~~~~~~dfi~LeL~~G~l~~ 76 (220)
T 2r1b_A 7 GHAGTTYIFSKGG-GQITYKWPPN-DRPSTRADRLAIGFSTVQKE--------AVLVRVDSSSGLGDYLELHIHQGKIGV 76 (220)
T ss_dssp CCCSSEEEEEEEE-EEEEEECCGG-GCCCBSEEEEEEEEECCCSS--------EEEEEEEESTTCCCEEEEEEETTEEEE
T ss_pred CCCCceEEECCCC-eEEEEECCCC-CcccccCcEEEEEEEeCCCC--------EEEEEecCCCCCCCeEEEEEECCEEEE
Confidence 3344557886431 4443 3321 01222344666666643321 2344322322 234566777888877
Q ss_pred EEeeecCcceeeeeeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeee---------ecccccc------------
Q psy14029 150 TSMKIKGKGFQHCVKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASST---------EMAWFVS------------ 208 (277)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~---------~l~~~p~------------ 208 (277)
+...+.+..........+.+|+||+|.|... ...+++.||+..+... .+. ..+
T Consensus 77 ~~~~G~~~~~~~~~~~~vnDG~WH~V~v~r~-----~~~~~L~VD~~~~~~~~~~g~~~~~~l~-~~~~~ip~~~~~~~~ 150 (220)
T 2r1b_A 77 KFNVGTDDIAIEESNAIINDGKYHVVRFTRS-----GGNATLQVDSWPVIERYPAGNNDNERLA-IARQRIPYRLGRVVD 150 (220)
T ss_dssp EEESSSSCEEEECTTCCCCSSSCEEEEEEEE-----TTEEEEEETTSCCEEECC------------------CHHHHHHH
T ss_pred EEECCCCceEEEeCceEecCCceEEEEEEEe-----CCEEEEEECCcceeeeccCCCccchhee-ccccccccccccccc
Confidence 6543322211111124588999999999887 5689999999855332 111 000
Q ss_pred ---------c--CCCcceeEeCCCCCCCCCccceEeccceeEecC
Q psy14029 209 ---------T--NEPFDKCYIGATPELDEERVFCGQMAAIYLFNE 242 (277)
Q Consensus 209 ---------~--~~~~~~~~IG~~~~~~~~~~f~g~lg~~~lf~~ 242 (277)
. -......+||+.+. ...|.|.|..+++=..
T Consensus 151 ~~~~~~~~~~~~~n~~~~l~lGG~p~---~~~F~GCi~~l~ing~ 192 (220)
T 2r1b_A 151 EWLLDKGRQLTIFNSQATIIIGGKEQ---GQPFQGQLSGLYYNGL 192 (220)
T ss_dssp HHHHHHHHGGGSBCCEEEEEESSTTT---TCCCCEEEEEEEETTB
T ss_pred cccccccccceEecCCCcEEECCccC---CCCCEEEEeEEEECCC
Confidence 0 00023568999763 4579999999988433
No 43
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=97.08 E-value=0.022 Score=59.48 Aligned_cols=152 Identities=16% Similarity=0.163 Sum_probs=91.8
Q ss_pred EeecCCCcccEECCCCCCCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeCC-------------CCeEEEEEeCCe
Q psy14029 80 FSFPGKKGSAMVLPPLAKWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSK-------------GVGYTAHFVGNC 146 (277)
Q Consensus 80 f~F~g~~~s~i~lp~~~~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~-------------g~g~e~~~~~~~ 146 (277)
..|.+.. +.+.+|. |+....++++++||-...+. -|+...... .--+.+.+.++.
T Consensus 424 vsF~~~~-syl~lp~---~~~~~~~~is~~FrT~~~~G--------lLly~~~~~~~~~~~~~~~~~~~df~~LeL~~G~ 491 (1245)
T 3qcw_A 424 ITFETPE-SFISLPK---WNAKKTGSISFDFRTTEPNG--------LILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGH 491 (1245)
T ss_dssp EEECSTT-CCEEECC---CCCSSEEEEEEEEECCCSCE--------EEEEEECCCCSSCCSSCTTSCCCCEEEEEEETTE
T ss_pred ceeCCCC-eEEEecC---CCccCceEEEEEEEeCCCCe--------EEEEecCccccccccccccccCCCEEEEEEeCCe
Confidence 5666663 7888885 45567789999988655321 233322111 123556677777
Q ss_pred EEEEEeeecCcceeeeeeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCCcceeEeCCCCCCCC
Q psy14029 147 LVLTSMKIKGKGFQHCVKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPFDKCYIGATPELDE 226 (277)
Q Consensus 147 lvv~~~~~~~~~~~~~~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~~~~~IG~~~~~~~ 226 (277)
+.+......|..........+.+|+||+|.|... ...+.+.||+.......-. ....-......+||+.|....
T Consensus 492 l~l~~~~G~g~~~l~~s~~~vnDG~WH~V~l~r~-----~~~~~L~VD~~~~~~~~~~-~~~~l~~~~~lylGG~p~~~~ 565 (1245)
T 3qcw_A 492 LYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRD-----GRSGTISVNTLRTPYTAPG-ESEILDLDDELYLGGLPENKA 565 (1245)
T ss_dssp EEEEEESSSCEEEEESCSSCCCSSCCEEEEEEEE-----TTEEEEEETTEEEEEECSS-SCCCCCCCSCEEESSCCSSCT
T ss_pred EEEEEECCCCeEEEeecccEecCCCEEEEEEEEe-----cCEEEEEEcccccccccCC-CcceeccCCceEEcccccccc
Confidence 7766433222211112345688999999999887 5679999999755321110 111111123568999764211
Q ss_pred -------------CccceEeccceeEecCCCCHHHH
Q psy14029 227 -------------ERVFCGQMAAIYLFNESLSTHQI 249 (277)
Q Consensus 227 -------------~~~f~g~lg~~~lf~~aLs~~~I 249 (277)
...|.|.|..+.|=.+.+.-..+
T Consensus 566 ~~~~p~~~~~~~~~~gF~GCir~l~ing~~~dl~~~ 601 (1245)
T 3qcw_A 566 GLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQM 601 (1245)
T ss_dssp TCCCCTTCHHHHTTCBCCEEEEEEEETTEEECHHHH
T ss_pred cccccccccccccccCceEEEEEEEECCEEcCchhh
Confidence 35799999999997777765543
No 44
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=96.79 E-value=0.034 Score=58.11 Aligned_cols=148 Identities=12% Similarity=0.108 Sum_probs=88.2
Q ss_pred EeecCCCcccEECCCCCCCCCCCceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCCeEEEEEeCCeEEEEEeeecCcce
Q psy14029 80 FSFPGKKGSAMVLPPLAKWPHENGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGVGYTAHFVGNCLVLTSMKIKGKGF 159 (277)
Q Consensus 80 f~F~g~~~s~i~lp~~~~~p~~~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~g~e~~~~~~~lvv~~~~~~~~~~ 159 (277)
..|.+.. +++.+|..+ ....++++++||-...+ --|+.......--+.+.+.++.+.++.....|...
T Consensus 840 ~~F~~~~-sy~~~p~~~---~~~~~~is~~frT~~~~--------GlLly~~~~~~dfi~l~L~~G~l~~~~~~G~g~~~ 907 (1245)
T 3qcw_A 840 VTFKTKS-SYVALATLQ---AYTSMHLFFQFKTTSLD--------GLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANL 907 (1245)
T ss_dssp EEECSTT-CEEEESCCC---CSSCEEEEEEEECSCSC--------EEEEEEEESTTCEEEEEEETTEEEEEEESSSCCEE
T ss_pred ccccccc-cEEEcCCcc---ccceEEEEEEEEeCCCC--------EEEEEeCCCCCCEEEEEEeCCEEEEEEECCCCcEE
Confidence 3455553 788888653 33468899988865432 12332222223346667778877665433222111
Q ss_pred e-eeeeeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCCcceeEeCCCCCC---------CCCcc
Q psy14029 160 Q-HCVKYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPFDKCYIGATPEL---------DEERV 229 (277)
Q Consensus 160 ~-~~~~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~~~~~IG~~~~~---------~~~~~ 229 (277)
. ......+.+|+||+|.+.... +....+.|||..+...... ...+ ......+||+.+.. .....
T Consensus 908 ~~~~s~~~vnDg~WH~V~~~~~~----~~~~~L~VD~~~~~~~~~~-~~~l-~~~~~lylGG~p~~~~~~~~~~~~~~~~ 981 (1245)
T 3qcw_A 908 IKGSSNKPLNDNQWHNVMISRDT----SNLHTVKIDTKITTQITAG-ARNL-DLKSDLYIGGVAKETYKSLPKLVHAKEG 981 (1245)
T ss_dssp EECCCSSCSCSSSCEEEEEEECT----TCEEEEEETTEEEEEECCC-CCCC-CEEEEEEESCCCGGGGGGCCTTCCCSSB
T ss_pred EEecCcccccCCCeEEEEEEEeC----CeeEEEEECCEeeeeccCC-ccee-ccCCCeEECcccccchhhhcccccccCC
Confidence 1 123466889999999998752 3356799999876544321 1112 12235689997631 12357
Q ss_pred ceEeccceeEecCCCC
Q psy14029 230 FCGQMAAIYLFNESLS 245 (277)
Q Consensus 230 f~g~lg~~~lf~~aLs 245 (277)
|.|.|..+.|-.+.+.
T Consensus 982 F~GCi~~l~ing~~~~ 997 (1245)
T 3qcw_A 982 FQGCLASVDLNGRLPD 997 (1245)
T ss_dssp CCEEEEEEEETTBCCC
T ss_pred cEEEeeeEEECCEEcc
Confidence 9999999999665443
No 45
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=95.81 E-value=0.074 Score=43.19 Aligned_cols=93 Identities=13% Similarity=0.149 Sum_probs=52.7
Q ss_pred CceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCCeEEEEEeCC--eEEEEEeeecCcceee-eeeeEEeCCcEEEEEEE
Q psy14029 102 NGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGVGYTAHFVGN--CLVLTSMKIKGKGFQH-CVKYEFQPRKWYMIAIV 178 (277)
Q Consensus 102 ~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~g~e~~~~~~--~lvv~~~~~~~~~~~~-~~~~~~~~~~W~hlavv 178 (277)
..|++.+=+++...+... ..--+|....+...++.+.+... .+.+.-. ..|..... ..+..+.+++||+|.|+
T Consensus 64 ~Df~le~dvk~~~~~~~g---~~Gi~fR~~~d~~~gY~~~i~~~~~~~~l~k~-~~g~~~~L~~~~~~~~~g~w~~l~I~ 139 (185)
T 4b1m_A 64 SDFTYESDITIKDGNGRG---AGALMFRSDKDAKNGYLANVDAKHDLVKFFKF-ENGAASVIAEYKTPIDVNKKYHLKTE 139 (185)
T ss_dssp SSEEEEEEEEEEEEEEEE---EEEEEEEECTTSSSEEEEEEETTTTEEEEEEE-ETTEEEEEEEEECCCCSSCCEEEEEE
T ss_pred cCEEEEEEEEEcCCCCcc---eEEEEEEEcCCCCCcEEEEEECCCCEEEEEEE-eCCcEEEeeeccccCCCCCeEEEEEE
Confidence 457777777775521000 00123332123446777777753 3322211 11211111 12346789999999999
Q ss_pred EEeccCCCCeEEEEECCEEeeeeec
Q psy14029 179 YIYNRWTKSEIKCFVNGQLASSTEM 203 (277)
Q Consensus 179 ~~~~~~~~s~v~lYvDG~l~~s~~l 203 (277)
.. .+.+++||||+.+.+..-
T Consensus 140 ~~-----G~~i~~~vnG~~v~~~~D 159 (185)
T 4b1m_A 140 AE-----GDRFKIYLDDRLVIDAHD 159 (185)
T ss_dssp EE-----TTEEEEEETTEEEEEEEC
T ss_pred EE-----CCEEEEEECCEEEEEEEC
Confidence 98 789999999998876653
No 46
>3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A*
Probab=95.03 E-value=0.32 Score=47.29 Aligned_cols=102 Identities=13% Similarity=0.125 Sum_probs=62.1
Q ss_pred ceeEEEEEEecCCCCCCCCCCCceEEEEEe-CCCC------eEEEEEeCCe-EEEEEeeecCcceeeeeeeEEeCCcEEE
Q psy14029 103 GFTFTTWFRLDPINSVNIEREKPYLYSFKT-SKGV------GYTAHFVGNC-LVLTSMKIKGKGFQHCVKYEFQPRKWYM 174 (277)
Q Consensus 103 GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~-~~g~------g~e~~~~~~~-lvv~~~~~~~~~~~~~~~~~~~~~~W~h 174 (277)
-||+++-|+++..... ..-|. ++. ..|+ |+-+.+..++ +.+.. ...+........+.+..++||+
T Consensus 530 dytVs~Dv~~~~~~~g-----~a~i~-~Rv~~~g~~~~~~~gy~~~i~~~G~~~l~~-~~~~~~vLa~g~~~~~~~~w~~ 602 (656)
T 3zr5_A 530 NMTVQCDVYIETPRSG-----GVFIA-GRVNKGGILIRSATGVFFWIFANGSYRVTA-DLGGWITYASGHADVTAKRWYT 602 (656)
T ss_dssp EEEEEEEEEECSTTTC-----EEEEE-EEECCCGGGGGGCEEEEEEEETTTEEEEEE-ETTCCSEEEEEECSCCTTCEEE
T ss_pred cEEEEEEEEeccCCCC-----cEEEE-EEEcCCCCCccccceEEEEEEcCCEEEEEE-ecCCeEEEEEEEecCCCCceEE
Confidence 3889999999986431 11122 222 2233 5655555444 54432 2222222123345789999999
Q ss_pred EEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCCcceeEeCC
Q psy14029 175 IAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPFDKCYIGA 220 (277)
Q Consensus 175 lavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~~~~~IG~ 220 (277)
|.|+.. .+.++.||||+.+.+..-.-+| . -...-||+
T Consensus 603 L~l~~~-----G~~i~~~ldG~~v~~~~D~~~p-~---~G~vgi~T 639 (656)
T 3zr5_A 603 LTLGIK-----GYFAFGMLNGTILWKNVRVKYP-G---HGWAAIGT 639 (656)
T ss_dssp EEEEEE-----TTEEEEEETTEEEEEEEECCSS-C---CCEEEEEE
T ss_pred EEEEEE-----CCEEEEEECCEEEEEEecCCCC-C---CCeEEEEe
Confidence 999998 8899999999999876432144 1 23456776
No 47
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=93.45 E-value=1.8 Score=39.34 Aligned_cols=126 Identities=12% Similarity=0.083 Sum_probs=66.2
Q ss_pred ceeEEEEEEecCCCCCCCCCCCceEEEEEeCCC--CeEEEEEeCCe---------EEEEEeeecCcceeeeeeeEEeCCc
Q psy14029 103 GFTFTTWFRLDPINSVNIEREKPYLYSFKTSKG--VGYTAHFVGNC---------LVLTSMKIKGKGFQHCVKYEFQPRK 171 (277)
Q Consensus 103 GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g--~g~e~~~~~~~---------lvv~~~~~~~~~~~~~~~~~~~~~~ 171 (277)
.+++++.||-...+ --|+...+.++ .-+.+.+.++. +.+... .+ ........+.+|+
T Consensus 250 ~~~is~~fRT~~~~--------GlLl~~~~~~~~~d~l~l~L~~G~le~~~~~~~l~~~~~--~g--~~~~~~~~l~DG~ 317 (422)
T 1h30_A 250 EVEVVAHIRPAADT--------GVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVLAVE--HT--ALALMEIKVCDGQ 317 (422)
T ss_dssp CEEEEEEEEESSSC--------EEEEEEEEGGGTEEEEEEEEESCC-----CCCEEEEEET--TE--EEEEEECCTTSSC
T ss_pred ceEEEEEEecCCCC--------EEEEEecCCCcCCCcEEEEEEcCccccccccceEEEEeC--Ce--eEEEeeecccCCC
Confidence 56778877765532 23554433221 12455566654 344321 11 1223346688999
Q ss_pred EEEEEEEEEeccCCCCeEEEEECCEEeeeeecc-cccc-c------CCCcceeEeCCCCCCC-----CCccceEecccee
Q psy14029 172 WYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMA-WFVS-T------NEPFDKCYIGATPELD-----EERVFCGQMAAIY 238 (277)
Q Consensus 172 W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~-~~p~-~------~~~~~~~~IG~~~~~~-----~~~~f~g~lg~~~ 238 (277)
||+|+|...+. .+ .+.||+.......-. ..|. . -......+||+.|... ....|.|.| .+.
T Consensus 318 WH~V~~~l~~~---~~--~L~vD~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lyiGG~p~~~~~~~~~~~~F~GCi-~l~ 391 (422)
T 1h30_A 318 EHVVTVSLRDG---EA--TLEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTSAPVTAFYRGCM-TLE 391 (422)
T ss_dssp CEEEEEEEETT---EE--EEEETTEECEESSCHHHHHHHHHHHHHHHTSCCEEEESCCCSCCTTSSSCCSBCCEEE-EEE
T ss_pred EeEeEEEEEEe---cc--EEEEeCCccceeechhhcccchhhhhhhhccCCceEEcccCCCCccccCccCCccccE-EEE
Confidence 99995555432 12 288999876543100 0011 0 0122357899987532 124699999 687
Q ss_pred EecCCCCH
Q psy14029 239 LFNESLST 246 (277)
Q Consensus 239 lf~~aLs~ 246 (277)
|=.+.++-
T Consensus 392 ing~~ldl 399 (422)
T 1h30_A 392 VNRRLLDL 399 (422)
T ss_dssp ETTEECCG
T ss_pred ECCEEecH
Confidence 74444443
No 48
>3zyp_A CIP1; metal binding protein, calcium-binding, CBM-containing, beta sandwich jelly roll, carbohydrate-binding; HET: NAG; 1.50A {Hypocrea jecorina}
Probab=93.30 E-value=0.44 Score=39.46 Aligned_cols=93 Identities=10% Similarity=0.066 Sum_probs=53.4
Q ss_pred CceeEEEEEEecCCCCCCCCCCCceEEEEEeCCCCeEEEEEe--CCeEEEEEeeec-----CcceeeeeeeEEeCCcEEE
Q psy14029 102 NGFTFTTWFRLDPINSVNIEREKPYLYSFKTSKGVGYTAHFV--GNCLVLTSMKIK-----GKGFQHCVKYEFQPRKWYM 174 (277)
Q Consensus 102 ~GfTfs~Wi~le~~~~~~~~~~~~~Lfs~~~~~g~g~e~~~~--~~~lvv~~~~~~-----~~~~~~~~~~~~~~~~W~h 174 (277)
.-+.+.+|||++..... ....|+.+......+.+..+. .+.+........ ...........++.++|||
T Consensus 65 ~~~y~r~~v~~~~~~~~----~~~t~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~l~~g~W~c 140 (218)
T 3zyp_A 65 GDVYVRAWIRLQTALGS----NHVTFIIMPDTAQGGKHLRIGGQSQVLDYNRESDDATLPDLSPNGIASTVTLPTGAFQC 140 (218)
T ss_dssp SSEEEEEEEEESSCCCS----SCEEEEEEEBGGGTTCEEEEEEETTEEEEEETTTCCEESCSSHHHHHHSCCCCCSSCEE
T ss_pred ceEEEEEEEEecccCCC----CcEEEEEeecCCCCCceEEeecccceeeEEEcCCccccCcccccccccceeecCCcEEE
Confidence 56889999999865321 234566665432223333332 334433321100 0000001235688999999
Q ss_pred EEEEEEeccCCCCeEEEEECCEEeeeee
Q psy14029 175 IAIVYIYNRWTKSEIKCFVNGQLASSTE 202 (277)
Q Consensus 175 lavv~~~~~~~~s~v~lYvDG~l~~s~~ 202 (277)
|-+.... ...+.+|+||+++....
T Consensus 141 vE~~~~~----~G~~~~W~DG~~v~~~t 164 (218)
T 3zyp_A 141 FEYHLGT----DGTIETWLNGSLIPGMT 164 (218)
T ss_dssp EEEEECS----SSCEEEEETTEECGGGC
T ss_pred EEEEECC----CCeEEEEECCEEeeeee
Confidence 9876652 45899999999996543
No 49
>4azz_A Levanase; hydrolase; 1.70A {Bacillus subtilis}
Probab=89.36 E-value=0.061 Score=42.89 Aligned_cols=35 Identities=14% Similarity=0.162 Sum_probs=29.0
Q ss_pred eeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeec
Q psy14029 164 KYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEM 203 (277)
Q Consensus 164 ~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l 203 (277)
...+.+++||||-|+.. .+.+.+||||+++.+...
T Consensus 104 ~~~~~~g~w~~l~I~~~-----G~~i~~~vnG~~v~~~~D 138 (172)
T 4azz_A 104 KTPIDVNKKYHLKTEAE-----GDRFKIYLDDRLVIDAHD 138 (172)
Confidence 34567899999999987 788999999988877654
No 50
>3gne_A Val-1; alginate lyase, polysaccharide lyase family 14, chlorella VI lyase; HET: FLC; 1.20A {Chlorella virus} PDB: 3a0n_A* 3im0_A*
Probab=82.63 E-value=1.8 Score=36.70 Aligned_cols=39 Identities=21% Similarity=0.207 Sum_probs=30.8
Q ss_pred EEeCCcEEEEEEEEEecc------CCCCeEEEEECCEEeeeeecc
Q psy14029 166 EFQPRKWYMIAIVYIYNR------WTKSEIKCFVNGQLASSTEMA 204 (277)
Q Consensus 166 ~~~~~~W~hlavv~~~~~------~~~s~v~lYvDG~l~~s~~l~ 204 (277)
.|.+|+||+|..-..-+. ...-.+.++|||+++....+.
T Consensus 159 ~f~~G~W~~V~q~VkLNT~~~G~g~aDG~v~v~VNG~~v~~~~i~ 203 (252)
T 3gne_A 159 ALKYDVWNRIEIGTKMNTFKNGIPQLDGESYVIVNGKKEVLKRIN 203 (252)
T ss_dssp CSCBTSCEEEEEEEECCCEETTEECSCEEEEEEETTEEEEEEEEC
T ss_pred eEcCCceEEEEEEEEcCCCCCCCccCCceEEEEECCEEEEECCEE
Confidence 689999999998776444 233478999999999766676
No 51
>3imm_A Putative secreted glycosylhydrolase; YP_001301887.1, putative glycosyl hydrolase; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}
Probab=77.07 E-value=4.3 Score=33.12 Aligned_cols=32 Identities=22% Similarity=0.452 Sum_probs=27.2
Q ss_pred EeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeec
Q psy14029 167 FQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEM 203 (277)
Q Consensus 167 ~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l 203 (277)
-++|+|.+.-|+.. ...|++++||+.|....+
T Consensus 117 kp~GeWN~~~I~~~-----g~~i~v~lNG~~V~~~~~ 148 (201)
T 3imm_A 117 KKPGEWNHMRIKCA-----GQHIMVILNGKKVTEMDM 148 (201)
T ss_dssp CCTTSEEEEEEEEE-----TTEEEEEETTEEEEEEEG
T ss_pred CCCCeeEEEEEEEE-----CCEEEEEECCEEEEEEEc
Confidence 35899999999887 678999999999987654
No 52
>2zzj_A Glucuronan lyase A; beta-jelly roll; HET: CIT; 1.80A {Trichoderma reesei}
Probab=73.48 E-value=39 Score=28.22 Aligned_cols=38 Identities=8% Similarity=0.144 Sum_probs=27.6
Q ss_pred eEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeee
Q psy14029 165 YEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTE 202 (277)
Q Consensus 165 ~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~ 202 (277)
..+..|+||-|+|-..=..-+.--+.+++||+++-...
T Consensus 144 ~~v~~G~Wh~iVihvkWs~d~~Gf~~vW~dG~~v~~~~ 181 (238)
T 2zzj_A 144 ATVSAGAWHRVVLQIKWASDNTGYFKIWFDGAKVHEEY 181 (238)
T ss_dssp EECCTTSCEEEEEEEEECSSTTEEEEEEETTEEEEEEE
T ss_pred ccccCCceEEEEEEEEEeCCCCcEEEEEECCEEEEeec
Confidence 45789999998775543222444799999999997654
No 53
>3s5q_A Putative glycosylhydrolase; concanavalin A-like lectins/glucanases, structural genomics, center for structural genomics, JCSG; 1.85A {Parabacteroides distasonis}
Probab=72.73 E-value=6.4 Score=32.46 Aligned_cols=32 Identities=22% Similarity=0.369 Sum_probs=27.1
Q ss_pred EeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeec
Q psy14029 167 FQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEM 203 (277)
Q Consensus 167 ~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l 203 (277)
-++|+|.+.-|+.. ...|++++||+.|....+
T Consensus 130 kp~GeWN~~~I~~~-----g~~i~v~lNG~~V~~~~~ 161 (214)
T 3s5q_A 130 KKPGEWNRMIITAK-----GQQIDIELNGKHIVSANL 161 (214)
T ss_dssp CCTTSEEEEEEEEE-----TTEEEEEETTEEEEEEEG
T ss_pred CCCCccEEEEEEEE-----CCEEEEEECCEEEEEEEc
Confidence 35899999999987 678999999999987644
No 54
>1oq1_A Protein YESU; structural genomics, singleton, PSI, protein structure initi midwest center for structural genomics, MCSG, unknown funct; 1.70A {Bacillus subtilis} SCOP: b.29.1.17
Probab=71.71 E-value=9.4 Score=31.58 Aligned_cols=64 Identities=11% Similarity=-0.038 Sum_probs=40.8
Q ss_pred EeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCCcceeEeCCCCCCCCCccceEeccceeEe
Q psy14029 167 FQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPFDKCYIGATPELDEERVFCGQMAAIYLF 240 (277)
Q Consensus 167 ~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~~~~~IG~~~~~~~~~~f~g~lg~~~lf 240 (277)
..++.||||-|+.+ +..|+..|||.++.+.+-. =-+...+....+||=.. -.+...++..+.++
T Consensus 155 ~dan~~Y~i~i~kd-----~~~v~f~vNg~~lF~~~D~-~~~~g~~~~~G~fGfR~----m~~~~~~y~nf~V~ 218 (223)
T 1oq1_A 155 DDADSPYRMKLIKD-----KGYVHFSINGLPILEWMDD-GSTYGPVLTKGKIGFRQ----MAPMKAVYRDFAVH 218 (223)
T ss_dssp GGCCSCEEEEEEEE-----TTEEEEEETTEEEEEEECC-SSSSSSCCCSBEEEEEE----ETTCEEEEEEEEEE
T ss_pred cCCCCcEEEEEEEe-----CCEEEEEECCEEEEEeeCC-CcccCCCCCCceEEEEe----cchhhhhccceEEE
Confidence 45689999999998 6789999999999887643 11111234445666432 12344555555554
No 55
>3h3l_A Putative sugar hydrolase; YP_001304206.1, structural genomic center for structural genomics, JCSG; HET: MSE; 1.59A {Parabacteroides distasonis atcc 8503}
Probab=71.06 E-value=6.1 Score=33.24 Aligned_cols=33 Identities=12% Similarity=0.139 Sum_probs=28.6
Q ss_pred EEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeec
Q psy14029 166 EFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEM 203 (277)
Q Consensus 166 ~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l 203 (277)
...+|+|.+.-|+.. .+.|+++|||+.|.....
T Consensus 149 ~kp~GeWNt~~I~v~-----g~~v~v~lNG~~V~~~~~ 181 (241)
T 3h3l_A 149 VKPYGNWNKTRIVVY-----NQRVIHYMNDVKILEFQF 181 (241)
T ss_dssp CCCTTSCEEEEEEEE-----TTEEEEEETTEEEEEEET
T ss_pred CCCCCcceEEEEEEE-----CCEEEEEECCEEEEEEEC
Confidence 356899999999887 679999999999988765
No 56
>3u1x_A Putative glycosyl hydrolase; glycosyl hydrolysis, carbohydrate metabolism,, structural GE joint center for structural genomics, JCSG; HET: MSE PGE; 1.70A {Parabacteroides distasonis}
Probab=69.12 E-value=7 Score=32.68 Aligned_cols=34 Identities=18% Similarity=0.322 Sum_probs=28.9
Q ss_pred eEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeec
Q psy14029 165 YEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEM 203 (277)
Q Consensus 165 ~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l 203 (277)
....+|+|.+.-|+.. ...|+++|||+.|.....
T Consensus 155 ~~~p~geWN~~~I~~~-----g~~i~v~lNG~~V~~~~~ 188 (236)
T 3u1x_A 155 QVNPPGEWNSSMVLYK-----DGYVEHWLNGEKLFSFQE 188 (236)
T ss_dssp CCCCTTSCEEEEEEEE-----TTEEEEEETTEEEEEEET
T ss_pred cCCCCCceEEEEEEEE-----CCEEEEEECCEEEEEEec
Confidence 3567899999999886 678999999999987654
No 57
>3osd_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.80A {Bacteroides thetaiotaomicron} PDB: 3nmb_A 4hxc_A*
Probab=67.21 E-value=8 Score=33.00 Aligned_cols=32 Identities=13% Similarity=0.064 Sum_probs=27.5
Q ss_pred EeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeec
Q psy14029 167 FQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEM 203 (277)
Q Consensus 167 ~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l 203 (277)
-.+|+|.+.-|+.. ...|+++|||+.|.....
T Consensus 176 kp~GeWNt~~I~v~-----g~~v~v~lNG~~V~d~~~ 207 (265)
T 3osd_A 176 KPFGEWNKAKIMVY-----KGTVVHGQNDENVLEYHL 207 (265)
T ss_dssp CCTTSCEEEEEEEE-----TTEEEEEETTEEEEEEET
T ss_pred CCCCceEEEEEEEE-----CCEEEEEECCEEEEEeec
Confidence 34799999999887 679999999999988764
No 58
>3hbk_A Putative glycosyl hydrolase; YP_001302580.1, WAS domain of U function (DUF1080), structural genomics; HET: MSE; 2.36A {Parabacteroides distasonis atcc 8503}
Probab=63.63 E-value=9.1 Score=32.22 Aligned_cols=32 Identities=13% Similarity=0.200 Sum_probs=26.9
Q ss_pred EeCCcEEEEEEEE-EeccCCCCeEEEEECCEEeeeeec
Q psy14029 167 FQPRKWYMIAIVY-IYNRWTKSEIKCFVNGQLASSTEM 203 (277)
Q Consensus 167 ~~~~~W~hlavv~-~~~~~~~s~v~lYvDG~l~~s~~l 203 (277)
-.+|+|.+.-|+. . ...|+++|||+.|.....
T Consensus 160 kp~GeWNt~~I~~~~-----g~~v~v~lNG~~V~~~~~ 192 (245)
T 3hbk_A 160 NGVGEWNTAVVKVFP-----NNHVEHWLNGVKVLEYER 192 (245)
T ss_dssp CCTTSEEEEEEEECT-----TCEEEEEETTEEEEEEET
T ss_pred CCCCccEEEEEEEEc-----CCEEEEEECCEEEEEEec
Confidence 4579999999988 4 678999999999988653
No 59
>1dyo_A Endo-1,4-beta-xylanase Y; carbohydrate-binding module, xylan-binding; 2.1A {Clostridium thermocellum} SCOP: b.18.1.7 PDB: 1h6y_A 1h6x_A
Probab=44.44 E-value=1e+02 Score=23.48 Aligned_cols=19 Identities=11% Similarity=0.071 Sum_probs=14.7
Q ss_pred CCCCCCceeEEEEEEecCC
Q psy14029 97 KWPHENGFTFTTWFRLDPI 115 (277)
Q Consensus 97 ~~p~~~GfTfs~Wi~le~~ 115 (277)
.+-+..-|+|++||++..-
T Consensus 64 ~l~~g~~Y~~Sa~V~~~~g 82 (160)
T 1dyo_A 64 TFVPGNTYCFSVVASFIEG 82 (160)
T ss_dssp TSCTTCEEEEEEEEECCSS
T ss_pred hccCCCEEEEEEEEEECCC
Confidence 3445689999999998664
No 60
>1b0n_B Protein (SINI protein); transcription regulator, antagonist, sporulation; 1.90A {Bacillus subtilis} SCOP: a.34.1.1
Probab=32.65 E-value=41 Score=21.50 Aligned_cols=30 Identities=13% Similarity=0.209 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHhhc
Q psy14029 23 DLLIDMMGVLASYSITVKELKLFFAAMKAV 52 (277)
Q Consensus 23 ~~l~~li~~L~s~sis~~elr~ll~ll~~~ 52 (277)
..-++||...-..++|..|+|.||.+.+..
T Consensus 13 ~ewl~LI~~Ak~lGlsleEIrefL~l~~~~ 42 (57)
T 1b0n_B 13 QEWVELMVEAKEANISPEEIRKYLLLNKKS 42 (57)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHhccC
Confidence 345678888889999999999999988643
No 61
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A
Probab=32.07 E-value=62 Score=25.99 Aligned_cols=33 Identities=21% Similarity=0.297 Sum_probs=26.1
Q ss_pred CcEEEEEEEEEeccCCCCeEEEEECCEEeeeeecccccc
Q psy14029 170 RKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVS 208 (277)
Q Consensus 170 ~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~ 208 (277)
..||--+|.-+ ...|..||||+++.+..-. +|.
T Consensus 142 ~~fH~Y~~~W~-----~~~I~~yvDg~~~~~~~~~-~p~ 174 (214)
T 2ayh_A 142 KGFHTYAFDWQ-----PGYIKWYVDGVLKHTATAN-IPS 174 (214)
T ss_dssp GSCEEEEEEEE-----TTEEEEEETTEEEEEECSS-CCC
T ss_pred CCeEEEEEEEe-----CCEEEEEECCEEEEEcCCC-CCC
Confidence 57887788766 5689999999999987655 663
No 62
>3vkl_A Galectin-8; beta-sandwich, carbohydrate binding, oligosaccharide, sugar protein; HET: GAL BGC; 2.55A {Homo sapiens} PDB: 3naj_A* 3vkm_A* 4fqz_A* 3ojb_A
Probab=30.02 E-value=2.5e+02 Score=23.75 Aligned_cols=36 Identities=22% Similarity=0.327 Sum_probs=30.6
Q ss_pred eeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeecc
Q psy14029 164 KYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMA 204 (277)
Q Consensus 164 ~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~ 204 (277)
.+.|.+|+=..|.|... .....++|||+...+.+-+
T Consensus 232 ~fPF~~g~~F~l~I~~~-----~~~f~V~vng~~~~~F~hR 267 (291)
T 3vkl_A 232 SFPFSPGMYFEMIIYCD-----VREFKVAVNGVHSLEYKHR 267 (291)
T ss_dssp CCCCCTTCEEEEEEEEC-----SSEEEEEETTEEEEEEECS
T ss_pred CCCCCCCCcEEEEEEEC-----CCEEEEEECCEEEEEecCC
Confidence 57799999999999887 6789999999999877644
No 63
>1y74_B MLIN-2/CASK, peripheral plasma membrane protein CASK; L27 domain, scaffold protein, protein assembly, cell polarity, transport protein; NMR {Mus musculus} SCOP: a.194.1.1 PDB: 1zl8_B
Probab=29.59 E-value=96 Score=18.74 Aligned_cols=42 Identities=12% Similarity=0.166 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHhhcCCCCCccHHHHHHHHHhcc
Q psy14029 23 DLLIDMMGVLASYSITVKELKLFFAAMKAVNNKWPRHSTKLLNVLRQMP 71 (277)
Q Consensus 23 ~~l~~li~~L~s~sis~~elr~ll~ll~~~~~~~~~~~~~ll~~L~~m~ 71 (277)
+...++++.|..+..+ .+.+.|.++|. .++...||.+-...+
T Consensus 3 ~l~~ev~~~L~~~~~~-~~~~EL~~lL~------~PHfqaLl~ahD~Va 44 (50)
T 1y74_B 3 QRAKEVLEEISCYPEN-NDAKELKRILT------QPHFMALLQTHDVVA 44 (50)
T ss_dssp HHHHHHHHHHHTCSSC-HHHHHHHHHHH------SHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCC-hHHHHHHHHHc------CHHHHHHHHHHHHHH
Confidence 3456778888887664 58888888887 346666776655443
No 64
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid}
Probab=28.83 E-value=88 Score=25.79 Aligned_cols=34 Identities=12% Similarity=0.120 Sum_probs=27.2
Q ss_pred CCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeecccccc
Q psy14029 169 PRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVS 208 (277)
Q Consensus 169 ~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~ 208 (277)
...||--+|.-+ ...|..||||+++.+.+-. +|.
T Consensus 161 ~~~fHtY~ieW~-----p~~I~~yVDG~~~~t~~~~-~P~ 194 (234)
T 3i4i_A 161 SEDFHIYAFNWQ-----PNYIAWLVDGEEVYRAYDD-IPV 194 (234)
T ss_dssp TTSCEEEEEEEE-----TTEEEEEETTEEEEEECSS-CCC
T ss_pred cCCeEEEEEEEE-----CCEEEEEECCEEEEEEcCC-CCC
Confidence 467877777766 5789999999999998765 773
No 65
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A
Probab=26.26 E-value=98 Score=24.88 Aligned_cols=65 Identities=14% Similarity=0.176 Sum_probs=40.5
Q ss_pred CcEEEEEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCCc---ceeEeCCC-----CCCCCCccceEeccceeEec
Q psy14029 170 RKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPF---DKCYIGAT-----PELDEERVFCGQMAAIYLFN 241 (277)
Q Consensus 170 ~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~---~~~~IG~~-----~~~~~~~~f~g~lg~~~lf~ 241 (277)
..||--+|.-+ ...|..||||+++.+..-. +|. .++ ....+|+. ...+...+..-.++-|++|.
T Consensus 84 ~~fHtY~veW~-----p~~I~~yVDG~~~~t~~~~-~P~--~p~~lilNl~~ggg~~~W~G~~~~~~p~~m~VDyVRvy~ 155 (208)
T 1cpn_A 84 KGFHTYAFDWQ-----PGYIKWYVDGVLKHTATAN-IPS--TPGKIMMNLWNGTGVDDWLGSYNGANPLYAEYDWVKYTS 155 (208)
T ss_dssp GSCEEEEEEEE-----TTEEEEEETTEEEEEECSS-CCC--SCBEEEEEEEEBSSCHHHHCCCCCCCCEEEEEEEEEEEE
T ss_pred cCcEEEEEEEC-----CCeEEEEECCEEEEEecCC-CCC--CCcEEEEEEEcCCCCCCCCCCCCCCCCeEEEEEEEEEEE
Confidence 57877777766 5689999999999987544 663 333 23356621 00011225566788888876
Q ss_pred C
Q psy14029 242 E 242 (277)
Q Consensus 242 ~ 242 (277)
.
T Consensus 156 ~ 156 (208)
T 1cpn_A 156 N 156 (208)
T ss_dssp T
T ss_pred C
Confidence 4
No 66
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A
Probab=26.22 E-value=81 Score=26.06 Aligned_cols=44 Identities=20% Similarity=0.312 Sum_probs=30.9
Q ss_pred CCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCCc---ceeEeCC
Q psy14029 169 PRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPF---DKCYIGA 220 (277)
Q Consensus 169 ~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~---~~~~IG~ 220 (277)
...||--+|.-+ ...|..||||+++.+.+-. +|. .++ ....+|+
T Consensus 165 ~~~fHtY~ieW~-----p~~I~~yVDG~~~~~~~~~-~P~--~P~~l~lnlw~Gg 211 (238)
T 3o5s_A 165 ANAYHTYAFDWQ-----PNSIKWYVDGQLKHTATNQ-IPT--TPGKIMMNLWNGT 211 (238)
T ss_dssp GGSCEEEEEEEC-----SSCEEEEETTEEEEEECSS-CCC--SCBEEEEEEEEBS
T ss_pred ccCeEEEEEEEE-----CCEEEEEECCEEEEEEcCC-CCC--CCeEEEEEEEcCC
Confidence 357877777654 6789999999999998765 774 343 2345665
No 67
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2
Probab=25.46 E-value=83 Score=26.29 Aligned_cols=29 Identities=14% Similarity=0.366 Sum_probs=23.2
Q ss_pred CcEEEEEEEEEeccCCCCeEEEEECCEEeeeeec
Q psy14029 170 RKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEM 203 (277)
Q Consensus 170 ~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l 203 (277)
..||--+|.-+ ...|+.||||+++.+.+-
T Consensus 190 ~~fHtY~veW~-----~~~I~~yvDg~~~~~~~~ 218 (271)
T 1dyp_A 190 NDFHTYGVNVT-----KDKITWYVDGEIVGEKDN 218 (271)
T ss_dssp SSCEEEEEEEC-----SSEEEEEETTEEEEEEEC
T ss_pred CCcEEEEEEEE-----CCEEEEEECCEEEEeecC
Confidence 57877777754 678999999999988754
No 68
>2kd2_A FAS apoptotic inhibitory molecule 1; protein, beta sandwich, apoptosis; NMR {Mus musculus} PDB: 2kw1_A
Probab=25.25 E-value=19 Score=25.59 Aligned_cols=17 Identities=24% Similarity=0.433 Sum_probs=14.2
Q ss_pred CCeEEEEECCEEeeeee
Q psy14029 186 KSEIKCFVNGQLASSTE 202 (277)
Q Consensus 186 ~s~v~lYvDG~l~~s~~ 202 (277)
+..+.+|+||+.+.+..
T Consensus 30 K~tmdVwvNG~~iet~g 46 (94)
T 2kd2_A 30 KDTMDVWCNGQKMETAG 46 (94)
T ss_dssp TTTTEEEESSSBCCCCC
T ss_pred cCcEEEEECCEEeEEee
Confidence 56789999999998763
No 69
>3b9c_A HSPC159; beta sandwich, unknown function; 1.90A {Homo sapiens} PDB: 2jj6_A
Probab=24.01 E-value=2.3e+02 Score=21.25 Aligned_cols=36 Identities=17% Similarity=0.292 Sum_probs=30.1
Q ss_pred eeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeecc
Q psy14029 164 KYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMA 204 (277)
Q Consensus 164 ~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~ 204 (277)
.+.|.+|+=.-|.|... .....++|||+...+.+-.
T Consensus 87 ~~PF~~G~~F~l~I~~~-----~~~f~V~Vng~~~~~F~hR 122 (144)
T 3b9c_A 87 YFPFIPDQPFRVEILCE-----YPRFRVFVDGHQLFDFYHR 122 (144)
T ss_dssp CCCCCTTCEEEEEEEEC-----SSEEEEEETTEEEEEEECS
T ss_pred CCcccCCCcEEEEEEEc-----CCEEEEEECCEEEEEecCC
Confidence 46789999999999887 5789999999998877654
No 70
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=22.88 E-value=1.1e+02 Score=25.38 Aligned_cols=30 Identities=23% Similarity=0.294 Sum_probs=23.5
Q ss_pred CCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeec
Q psy14029 169 PRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEM 203 (277)
Q Consensus 169 ~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l 203 (277)
...||--+|.-+ ...|..||||+++.+..-
T Consensus 164 ~~~fH~Y~veWt-----~~~I~~yVDg~~~~~~~~ 193 (251)
T 3iln_A 164 RTDFHVYAIEWT-----PEEIRWFVDDSLYYRFPN 193 (251)
T ss_dssp TTSCEEEEEEEC-----SSEEEEEETTEEEEEEEC
T ss_pred ccCcEEEEEEEE-----CCEEEEEECCEEEEEEeC
Confidence 467877777654 679999999999988763
No 71
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=22.71 E-value=1e+02 Score=26.08 Aligned_cols=67 Identities=19% Similarity=0.209 Sum_probs=42.8
Q ss_pred CCcEEEEEEEEEeccCCCCeEEEEECCEEeeeee----cccccccCCCc---ceeEeCCCCC---C----C-CCccceEe
Q psy14029 169 PRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTE----MAWFVSTNEPF---DKCYIGATPE---L----D-EERVFCGQ 233 (277)
Q Consensus 169 ~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~----l~~~p~~~~~~---~~~~IG~~~~---~----~-~~~~f~g~ 233 (277)
...||--+|.-+ ...|..||||+++.+.+ .. +| ..++ ....+|+.-. + + ...+|.-.
T Consensus 141 ~~~FHtY~ieWt-----p~~I~fyVDG~~v~t~~~~~~~~-~P--~~P~~l~lnlw~Gg~Wa~~gG~~~~d~~~~P~~~~ 212 (274)
T 2uwa_A 141 TQDYHNYAIYWT-----PSEIIFFVDDVPIRRYPRKSDAT-FP--LRPLWVYGSVWDASSWATENGKYKADYRYQPFVGK 212 (274)
T ss_dssp TSSCEEEEEEEC-----SSEEEEEETTEEEEEEECCCGGG-SC--CSCEEEEEEEEECTTTTBGGGTBCCCGGGCCEEEE
T ss_pred CCCcEEEEEEEe-----cCeEEEEECCeEEEEEECCcCCC-CC--CCCEEEEEEEEeCCCCccCCCcccccCCCCCEEEE
Confidence 367877777754 67999999999998864 23 56 2343 2345666422 1 1 13467778
Q ss_pred ccceeEecCC
Q psy14029 234 MAAIYLFNES 243 (277)
Q Consensus 234 lg~~~lf~~a 243 (277)
+..|.+..-+
T Consensus 213 v~~v~v~~c~ 222 (274)
T 2uwa_A 213 YEDFKLGSCT 222 (274)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEecc
Confidence 8888887644
No 72
>3bwu_D FIMD, outer membrane usher protein FIMD, N-terminal DOM; usher, N-terminal domain, ternary complex with chaperone and subunit, chaperone, structural protein, mebrane protein; 1.76A {Escherichia coli} SCOP: b.167.1.1 PDB: 1ze3_D 1zdx_A
Probab=22.30 E-value=81 Score=23.00 Aligned_cols=20 Identities=10% Similarity=0.433 Sum_probs=16.5
Q ss_pred eEEEEECCEEeeeeecccccc
Q psy14029 188 EIKCFVNGQLASSTEMAWFVS 208 (277)
Q Consensus 188 ~v~lYvDG~l~~s~~l~~~p~ 208 (277)
.|.|||||+.+.+..+. |..
T Consensus 34 ~vdI~vN~~~~~~~~i~-f~~ 53 (125)
T 3bwu_D 34 RVDIYLNNGYMATRDVT-FNT 53 (125)
T ss_dssp EEEEEETTEEEEEEEEE-EEE
T ss_pred EEEEEECCeEccceEEE-EEe
Confidence 47899999999998887 643
No 73
>4b0m_A F1 capsule-anchoring protein; protein transport, chaperone-usher pathway, PILI assembly; 1.80A {Yersinia pestis} PDB: 4b0e_A
Probab=22.28 E-value=62 Score=24.28 Aligned_cols=17 Identities=29% Similarity=0.491 Sum_probs=14.3
Q ss_pred eEEEEECCEEeeeeecc
Q psy14029 188 EIKCFVNGQLASSTEMA 204 (277)
Q Consensus 188 ~v~lYvDG~l~~s~~l~ 204 (277)
.|.|||||+.+.+..+.
T Consensus 33 ~vdI~vN~~~~~~~~i~ 49 (136)
T 4b0m_A 33 FVNVFVNGRKVDSGNID 49 (136)
T ss_dssp EEEEEETTEEEEEEEEE
T ss_pred EEEEEECCccccceEEE
Confidence 47899999999888776
No 74
>2kgf_A Capsid protein P27; retrovirus capsid protein, N-terminal core domain (SCOP), viral protein; NMR {Mason-pfizer monkey virus}
Probab=21.80 E-value=79 Score=24.08 Aligned_cols=26 Identities=12% Similarity=0.156 Sum_probs=23.1
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHh
Q psy14029 25 LIDMMGVLASYSITVKELKLFFAAMK 50 (277)
Q Consensus 25 l~~li~~L~s~sis~~elr~ll~ll~ 50 (277)
-+.+++.|+.+.++|.|++++.|..-
T Consensus 41 T~~lle~la~~~LtP~DW~~lara~L 66 (140)
T 2kgf_A 41 TLAIVESVADNWLTPTDWNTLVRAVL 66 (140)
T ss_dssp HHHHHHHHHTSBCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCChHHHHHHHHHHc
Confidence 36799999999999999999998863
No 75
>2v4x_A JSRV capsid, capsid protein P27; virion, zinc-finger, metal-binding, CAPS protein, structural protein, viral nucleoprotein; HET: MSE; 1.5A {Jaagsiekte sheep retrovirus}
Probab=21.54 E-value=84 Score=23.95 Aligned_cols=26 Identities=19% Similarity=0.148 Sum_probs=23.1
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHh
Q psy14029 25 LIDMMGVLASYSITVKELKLFFAAMK 50 (277)
Q Consensus 25 l~~li~~L~s~sis~~elr~ll~ll~ 50 (277)
-+.+++.|+.+.++|.|++++.|..-
T Consensus 36 T~a~le~La~~~LtP~DW~~lara~L 61 (140)
T 2v4x_A 36 TIAMIENLGTQALPPNDWKQTARACL 61 (140)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCCChHHHHHHHHHHc
Confidence 46799999999999999999998863
No 76
>1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A*
Probab=21.38 E-value=3.5e+02 Score=26.52 Aligned_cols=32 Identities=9% Similarity=0.347 Sum_probs=25.6
Q ss_pred eCCcEEEEEEEEEeccCCCCeEEEEECCEEeeee
Q psy14029 168 QPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASST 201 (277)
Q Consensus 168 ~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~ 201 (277)
..+.||-+.|++.++. ...+++|+||.+..+.
T Consensus 149 ~~~~~h~~~~~~~~~~--~~~~~f~~dG~l~~~~ 180 (781)
T 1w0p_A 149 AATEYHKFELVFLPGS--NPSASFYFDGKLIRDN 180 (781)
T ss_dssp GGGSCEEEEEEEECSS--SCEEEEEETTEEEEEE
T ss_pred CCCceeEEEEEeecCC--CceeEEecCCcEEEEe
Confidence 4669999999977642 4579999999999854
No 77
>1em9_A GAG polyprotein capsid protein P27; virus/viral protein; 2.05A {Rous sarcoma virus - prague C} SCOP: a.73.1.1
Probab=21.32 E-value=84 Score=24.22 Aligned_cols=25 Identities=8% Similarity=0.153 Sum_probs=22.9
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHH
Q psy14029 25 LIDMMGVLASYSITVKELKLFFAAM 49 (277)
Q Consensus 25 l~~li~~L~s~sis~~elr~ll~ll 49 (277)
-+.++|.|++..+.|.|+|++-|..
T Consensus 36 T~a~lEaL~~~~L~P~Dwk~laRa~ 60 (154)
T 1em9_A 36 TMAEVEALMSSPLLPHDVTNLMRVI 60 (154)
T ss_dssp HHHHHHHHTSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCChHHHHHHHHHH
Confidence 4679999999999999999999986
No 78
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2
Probab=21.11 E-value=1.6e+02 Score=23.80 Aligned_cols=77 Identities=14% Similarity=0.153 Sum_probs=47.0
Q ss_pred CcEEEEEEEEEeccCCCCeEEEEECCEEeeeeecccccccCCCc---ceeEeCCCC-----CCCCCccceEeccceeEec
Q psy14029 170 RKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMAWFVSTNEPF---DKCYIGATP-----ELDEERVFCGQMAAIYLFN 241 (277)
Q Consensus 170 ~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~~~p~~~~~~---~~~~IG~~~-----~~~~~~~f~g~lg~~~lf~ 241 (277)
..||--+|.-+ ...|..||||+++.+..-. +|.. |+ ....+|+.. ..+...++.-.++-|.++.
T Consensus 16 ~~fH~Y~i~W~-----~~~I~~~VDg~~~~~~~~~-~p~~--p~~l~lnlw~gg~~~~W~g~~~~~~P~~m~VDyVrvy~ 87 (214)
T 1ajo_A 16 KGFHTYAFDWQ-----PGYIKWYVDGVLKHTATAN-IPST--PGKIMMNLWNGTGVDDWLGSYNGANPLYAEYDWVKYTS 87 (214)
T ss_dssp GSCEEEEEEEE-----TTEEEEEETTEEEEEECSS-CCCS--CBEEEEEEEEBSSCHHHHCCCCCCCCEEEEEEEEEEEE
T ss_pred CCcEEEEEEEe-----CCeEEEEECCEEEEEEcCC-CCCC--CeEEEEEEEeccCccccccccccCCCceEEEeeeeccc
Confidence 45766677655 5689999999999987655 6643 43 233566310 0011224455777778877
Q ss_pred CCCCHHHHHHHHhCCCCCccCCCC
Q psy14029 242 ESLSTHQICAMHRLGPGYKVKTGW 265 (277)
Q Consensus 242 ~aLs~~~I~~iy~lGp~y~~~fq~ 265 (277)
.+ +|..|.-.|..
T Consensus 88 ~a-----------~g~~~~~dFt~ 100 (214)
T 1ajo_A 88 NQ-----------TGGSFFEPFNS 100 (214)
T ss_dssp SS-----------TTCCEEECCSS
T ss_pred cc-----------ccceeEEeecc
Confidence 65 45556666654
No 79
>2y5p_A Internalin B, INLB; protein binding, virulence factor, pathogenicity factor, BET fold; 1.30A {Listeria monocytogenes}
Probab=20.41 E-value=42 Score=22.35 Aligned_cols=16 Identities=25% Similarity=0.891 Sum_probs=13.2
Q ss_pred CCCCceeEEEEEEecC
Q psy14029 99 PHENGFTFTTWFRLDP 114 (277)
Q Consensus 99 p~~~GfTfs~Wi~le~ 114 (277)
|...||+|.-|..-+.
T Consensus 32 Ptk~GYtF~GWyt~~~ 47 (74)
T 2y5p_A 32 PTKQGYVFKGWYTEKN 47 (74)
T ss_dssp CEETTEEEEEEESSSS
T ss_pred ceeCCeEEeeeeecCC
Confidence 6689999999987554
No 80
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A
Probab=20.27 E-value=1.4e+02 Score=24.40 Aligned_cols=29 Identities=14% Similarity=0.138 Sum_probs=22.3
Q ss_pred CcEEEEEEEEEeccCCCCeEEEEECCEEeeeeec
Q psy14029 170 RKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEM 203 (277)
Q Consensus 170 ~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l 203 (277)
..||--++.-+ ...|+.||||+++.+..-
T Consensus 166 ~~fH~Y~~eW~-----~~~I~~yvDg~~~~~~~~ 194 (245)
T 2hyk_A 166 DTFHTFAVDWR-----PGSITWSVDGVAYQTYTS 194 (245)
T ss_dssp GSCEEEEEEEE-----TTEEEEEETTEEEEEEEG
T ss_pred CCCEEEEEEEe-----CCEEEEEECCEEEEEEcc
Confidence 46776666655 568999999999988753
No 81
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus}
Probab=20.24 E-value=1.4e+02 Score=24.63 Aligned_cols=30 Identities=20% Similarity=0.436 Sum_probs=22.5
Q ss_pred CCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeec
Q psy14029 169 PRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEM 203 (277)
Q Consensus 169 ~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l 203 (277)
...||--++.-+ ...|+.||||+++.+..-
T Consensus 180 ~~~fH~Y~~eW~-----~~~I~~yvDg~~~~~~~~ 209 (264)
T 2vy0_A 180 TEDFHVFGIVWY-----PDKIKWYVDGTFYHEVTK 209 (264)
T ss_dssp TTSCEEEEEEEE-----TTEEEEEETTEEEEEEEH
T ss_pred CCCCEEEEEEEe-----cCEEEEEECCEEEEEEch
Confidence 356776666655 568999999999988653
No 82
>1a78_A Galectin-1; S-lectin, carbohydrate binding, complex (lectin/saccharide); HET: TDG; 2.00A {Bufo arenarum} SCOP: b.29.1.3 PDB: 1gan_A*
Probab=20.14 E-value=2.6e+02 Score=20.49 Aligned_cols=36 Identities=17% Similarity=0.108 Sum_probs=30.1
Q ss_pred eeEEeCCcEEEEEEEEEeccCCCCeEEEEECCEEeeeeecc
Q psy14029 164 KYEFQPRKWYMIAIVYIYNRWTKSEIKCFVNGQLASSTEMA 204 (277)
Q Consensus 164 ~~~~~~~~W~hlavv~~~~~~~~s~v~lYvDG~l~~s~~l~ 204 (277)
.+.|.+|+=..|.|... .....++|||+...+.+-.
T Consensus 77 ~~PF~~G~~F~l~i~~~-----~~~f~V~Vng~~~~~F~hR 112 (134)
T 1a78_A 77 VFPFQQGAEVMVCFEYQ-----TQKIIIKFSSGDQFSFPVR 112 (134)
T ss_dssp CCCCCTTSEEEEEEEEC-----SSEEEEEETTSCEEEEECS
T ss_pred CCcccCCCcEEEEEEEc-----CCEEEEEECCEEEEEecCC
Confidence 56889999999999887 5789999999988777654
Done!