Query psy1403
Match_columns 384
No_of_seqs 284 out of 2300
Neff 6.7
Searched_HMMs 46136
Date Fri Aug 16 17:49:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1403.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1403hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372|consensus 100.0 4.7E-84 1E-88 593.3 17.5 289 78-375 2-291 (303)
2 KOG0373|consensus 100.0 1.2E-77 2.5E-82 543.6 17.0 289 77-374 4-294 (306)
3 KOG0374|consensus 100.0 2.2E-76 4.8E-81 579.3 24.9 294 76-369 6-303 (331)
4 PTZ00480 serine/threonine-prot 100.0 4.4E-75 9.6E-80 568.3 31.7 297 76-372 8-304 (320)
5 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 7E-74 1.5E-78 556.3 30.3 291 79-369 2-292 (293)
6 PTZ00244 serine/threonine-prot 100.0 1.6E-73 3.5E-78 553.4 29.6 291 78-368 3-293 (294)
7 cd07420 MPP_RdgC Drosophila me 100.0 9.3E-73 2E-77 552.6 31.2 284 74-366 2-320 (321)
8 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 1.1E-72 2.3E-77 546.1 28.8 283 79-370 2-285 (285)
9 PTZ00239 serine/threonine prot 100.0 8.2E-72 1.8E-76 543.2 29.5 286 78-372 2-289 (303)
10 cd07417 MPP_PP5_C PP5, C-termi 100.0 8.5E-71 1.8E-75 539.2 30.0 291 74-373 11-308 (316)
11 smart00156 PP2Ac Protein phosp 100.0 2.6E-70 5.6E-75 526.8 29.7 270 100-369 1-270 (271)
12 cd07416 MPP_PP2B PP2B, metallo 100.0 3.8E-70 8.1E-75 533.1 30.8 283 79-370 3-298 (305)
13 cd07419 MPP_Bsu1_C Arabidopsis 100.0 1.9E-68 4E-73 522.9 28.0 286 83-368 2-311 (311)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 5.5E-66 1.2E-70 512.3 30.9 298 74-372 7-369 (377)
15 KOG0371|consensus 100.0 6.3E-68 1.4E-72 489.7 12.4 287 77-372 18-305 (319)
16 KOG0375|consensus 100.0 4.9E-64 1.1E-68 481.0 13.6 269 99-368 60-341 (517)
17 KOG0377|consensus 100.0 7.7E-56 1.7E-60 433.1 15.9 302 58-368 100-431 (631)
18 KOG0376|consensus 100.0 2.9E-52 6.4E-57 416.0 15.8 352 13-378 97-467 (476)
19 cd00144 MPP_PPP_family phospho 100.0 1.2E-35 2.7E-40 276.4 20.5 214 130-354 1-224 (225)
20 cd07425 MPP_Shelphs Shewanella 99.9 7.2E-26 1.6E-30 210.3 17.6 175 130-339 1-196 (208)
21 PRK13625 bis(5'-nucleosyl)-tet 99.9 7.4E-26 1.6E-30 215.2 16.6 122 127-250 1-146 (245)
22 PRK00166 apaH diadenosine tetr 99.9 2.6E-24 5.5E-29 207.7 17.1 218 128-359 2-262 (275)
23 cd07422 MPP_ApaH Escherichia c 99.9 4E-25 8.7E-30 211.2 11.4 157 129-293 1-168 (257)
24 TIGR00668 apaH bis(5'-nucleosy 99.9 3.3E-25 7.2E-30 212.8 10.6 195 128-326 2-208 (279)
25 cd07413 MPP_PA3087 Pseudomonas 99.9 8.3E-24 1.8E-28 198.4 16.9 115 130-247 2-143 (222)
26 cd07423 MPP_PrpE Bacillus subt 99.9 1.6E-23 3.5E-28 197.6 17.7 121 127-250 1-143 (234)
27 PRK11439 pphA serine/threonine 99.9 1.7E-22 3.7E-27 188.8 13.4 115 127-247 17-146 (218)
28 PHA02239 putative protein phos 99.9 5.1E-22 1.1E-26 187.8 14.6 157 128-325 2-205 (235)
29 cd07424 MPP_PrpA_PrpB PrpA and 99.9 8.1E-22 1.7E-26 182.6 13.8 169 127-326 1-184 (207)
30 cd07421 MPP_Rhilphs Rhilph pho 99.9 3.5E-21 7.5E-26 185.6 15.6 148 128-280 3-243 (304)
31 PRK09968 serine/threonine-spec 99.8 8.4E-21 1.8E-25 177.6 9.6 115 127-247 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.4 1.8E-12 3.9E-17 110.3 11.5 158 128-321 2-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.2 4.6E-10 1E-14 98.6 14.8 83 128-247 1-86 (155)
34 COG0639 ApaH Diadenosine tetra 99.2 4.6E-11 9.9E-16 101.9 5.8 145 199-344 2-155 (155)
35 PF12850 Metallophos_2: Calcin 99.1 6.2E-10 1.3E-14 96.9 11.5 122 128-324 2-123 (156)
36 TIGR00040 yfcE phosphoesterase 99.1 1.2E-09 2.5E-14 96.8 11.8 62 128-198 2-64 (158)
37 PRK09453 phosphodiesterase; Pr 99.0 1E-09 2.3E-14 99.5 8.1 68 128-199 2-77 (182)
38 cd07379 MPP_239FB Homo sapiens 99.0 4.1E-09 8.8E-14 90.9 10.2 118 128-326 1-120 (135)
39 cd00838 MPP_superfamily metall 98.8 3.2E-08 7E-13 81.9 10.6 118 130-327 1-120 (131)
40 cd07397 MPP_DevT Myxococcus xa 98.8 2.6E-08 5.6E-13 94.4 10.6 156 128-322 2-208 (238)
41 cd07388 MPP_Tt1561 Thermus the 98.8 3.9E-07 8.4E-12 85.8 17.9 71 127-198 5-75 (224)
42 cd07394 MPP_Vps29 Homo sapiens 98.7 5.3E-07 1.1E-11 81.9 15.4 110 128-323 1-119 (178)
43 cd07392 MPP_PAE1087 Pyrobaculu 98.7 2.3E-07 5E-12 83.1 11.8 66 129-200 1-67 (188)
44 cd07404 MPP_MS158 Microscilla 98.6 1.7E-07 3.6E-12 83.4 8.6 67 129-198 1-68 (166)
45 PRK05340 UDP-2,3-diacylglucosa 98.5 4.1E-07 9E-12 86.2 9.4 211 127-365 1-237 (241)
46 cd07403 MPP_TTHA0053 Thermus t 98.5 9.6E-07 2.1E-11 76.0 10.8 107 130-326 1-107 (129)
47 cd07400 MPP_YydB Bacillus subt 98.5 2.3E-06 5E-11 74.0 11.7 118 129-327 1-130 (144)
48 TIGR01854 lipid_A_lpxH UDP-2,3 98.4 1.7E-06 3.6E-11 81.6 10.2 205 129-358 1-229 (231)
49 cd07399 MPP_YvnB Bacillus subt 98.4 1.6E-05 3.5E-10 74.1 15.8 193 128-368 2-213 (214)
50 TIGR03729 acc_ester putative p 98.3 6.1E-06 1.3E-10 78.0 11.2 68 128-198 1-74 (239)
51 COG0622 Predicted phosphoester 98.2 5E-05 1.1E-09 68.8 14.8 158 127-368 2-165 (172)
52 PRK11340 phosphodiesterase Yae 98.2 8.1E-06 1.8E-10 78.9 9.6 70 127-198 50-125 (271)
53 PRK11148 cyclic 3',5'-adenosin 98.1 6.9E-05 1.5E-09 72.3 14.7 70 127-198 15-98 (275)
54 PF08321 PPP5: PPP5 TPR repeat 98.1 6.7E-06 1.5E-10 67.2 6.3 83 35-125 1-95 (95)
55 cd07395 MPP_CSTP1 Homo sapiens 98.0 0.00016 3.4E-09 69.1 14.7 71 128-198 6-99 (262)
56 cd07385 MPP_YkuE_C Bacillus su 98.0 1.1E-05 2.3E-10 74.8 5.5 71 127-199 2-77 (223)
57 cd07393 MPP_DR1119 Deinococcus 97.9 9.3E-05 2E-09 69.8 11.6 47 298-346 181-230 (232)
58 cd07383 MPP_Dcr2 Saccharomyces 97.8 0.0003 6.6E-09 64.4 12.8 69 128-196 4-87 (199)
59 COG2908 Uncharacterized protei 97.7 0.00014 3.1E-09 68.5 9.1 201 130-361 1-230 (237)
60 cd07396 MPP_Nbla03831 Homo sap 97.7 8.3E-05 1.8E-09 71.5 7.4 73 128-200 2-88 (267)
61 PRK04036 DNA polymerase II sma 97.7 0.00022 4.7E-09 75.0 10.7 72 127-200 244-345 (504)
62 TIGR00619 sbcd exonuclease Sbc 97.5 0.00017 3.8E-09 69.0 6.6 71 128-198 2-88 (253)
63 COG2129 Predicted phosphoester 97.5 0.018 4E-07 54.0 19.1 204 127-358 4-217 (226)
64 cd07391 MPP_PF1019 Pyrococcus 97.5 0.0003 6.4E-09 63.2 7.1 57 142-198 30-88 (172)
65 cd07402 MPP_GpdQ Enterobacter 97.5 0.00031 6.7E-09 65.7 7.2 69 128-198 1-83 (240)
66 PHA02546 47 endonuclease subun 97.4 0.00024 5.2E-09 71.0 6.5 71 128-198 2-89 (340)
67 cd08165 MPP_MPPE1 human MPPE1 97.4 0.00096 2.1E-08 59.2 9.7 47 152-198 37-89 (156)
68 cd07398 MPP_YbbF-LpxH Escheric 97.4 0.0004 8.7E-09 63.9 6.9 69 130-199 1-83 (217)
69 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.4 0.00029 6.3E-09 68.0 6.1 70 129-198 1-86 (262)
70 cd00840 MPP_Mre11_N Mre11 nucl 97.4 0.00032 7E-09 64.5 6.1 74 128-201 1-92 (223)
71 PF06874 FBPase_2: Firmicute f 97.3 0.001 2.3E-08 70.2 10.0 71 298-370 507-587 (640)
72 TIGR00024 SbcD_rel_arch putati 97.1 0.0013 2.9E-08 62.0 7.2 69 127-199 15-103 (225)
73 cd07390 MPP_AQ1575 Aquifex aeo 97.1 0.0008 1.7E-08 60.2 5.4 67 129-200 1-84 (168)
74 PRK10966 exonuclease subunit S 97.1 0.0011 2.4E-08 67.9 6.7 71 128-199 2-88 (407)
75 TIGR00583 mre11 DNA repair pro 96.9 0.0021 4.6E-08 65.7 7.1 73 127-199 4-124 (405)
76 cd07384 MPP_Cdc1_like Saccharo 96.9 0.0087 1.9E-07 54.0 9.9 48 152-199 44-101 (171)
77 COG1409 Icc Predicted phosphoh 96.8 0.0038 8.2E-08 59.4 7.7 72 128-201 2-81 (301)
78 cd07401 MPP_TMEM62_N Homo sapi 96.8 0.0026 5.6E-08 60.9 6.0 71 129-199 2-90 (256)
79 COG1408 Predicted phosphohydro 96.7 0.0061 1.3E-07 59.6 8.4 71 128-200 46-120 (284)
80 cd00839 MPP_PAPs purple acid p 96.5 0.0025 5.5E-08 61.5 4.1 69 128-200 6-83 (294)
81 cd07386 MPP_DNA_pol_II_small_a 96.5 0.0039 8.5E-08 59.0 5.2 68 130-199 2-95 (243)
82 cd08163 MPP_Cdc1 Saccharomyces 96.4 0.084 1.8E-06 50.8 13.9 31 297-329 203-233 (257)
83 KOG0376|consensus 96.1 0.003 6.4E-08 64.9 2.2 239 99-344 14-299 (476)
84 cd07380 MPP_CWF19_N Schizosacc 96.0 0.012 2.6E-07 52.1 5.4 119 130-321 1-121 (150)
85 cd08166 MPP_Cdc1_like_1 unchar 95.9 0.013 2.9E-07 54.1 5.5 46 153-198 42-93 (195)
86 COG4186 Predicted phosphoester 95.8 0.04 8.7E-07 49.0 7.4 46 152-201 44-89 (186)
87 cd00845 MPP_UshA_N_like Escher 95.5 0.017 3.7E-07 54.6 4.5 66 128-198 2-82 (252)
88 PF14582 Metallophos_3: Metall 95.5 0.038 8.3E-07 52.1 6.6 73 127-199 6-103 (255)
89 cd08164 MPP_Ted1 Saccharomyces 95.2 0.037 7.9E-07 51.1 5.4 66 133-198 23-111 (193)
90 COG0420 SbcD DNA repair exonuc 95.0 0.062 1.3E-06 54.5 6.9 73 128-200 2-90 (390)
91 PLN02533 probable purple acid 94.3 0.05 1.1E-06 56.2 4.5 70 127-199 140-212 (427)
92 cd07410 MPP_CpdB_N Escherichia 94.1 0.058 1.3E-06 52.0 4.2 66 128-198 2-95 (277)
93 COG1311 HYS2 Archaeal DNA poly 93.7 1.2 2.5E-05 46.4 13.0 207 128-358 227-461 (481)
94 cd00842 MPP_ASMase acid sphing 93.5 1 2.2E-05 43.6 11.8 49 153-201 68-125 (296)
95 cd07378 MPP_ACP5 Homo sapiens 93.1 0.17 3.7E-06 48.3 5.7 70 128-198 2-83 (277)
96 COG1407 Predicted ICC-like pho 93.0 0.27 5.8E-06 46.7 6.5 74 125-201 18-113 (235)
97 KOG3325|consensus 92.1 3.2 6.9E-05 36.9 11.4 115 129-326 3-123 (183)
98 cd07408 MPP_SA0022_N Staphyloc 91.4 0.25 5.5E-06 47.1 4.4 66 128-198 2-82 (257)
99 cd07412 MPP_YhcR_N Bacillus su 91.3 0.21 4.6E-06 48.7 3.9 66 128-198 2-88 (288)
100 KOG3662|consensus 90.3 0.5 1.1E-05 48.3 5.6 56 142-197 81-143 (410)
101 cd07387 MPP_PolD2_C PolD2 (DNA 88.9 7.2 0.00016 37.6 12.1 48 311-363 204-254 (257)
102 cd07411 MPP_SoxB_N Thermus the 88.7 0.61 1.3E-05 44.7 4.7 64 129-198 3-95 (264)
103 KOG0918|consensus 86.4 0.019 4.1E-07 57.8 -7.3 192 155-358 49-250 (476)
104 PRK09419 bifunctional 2',3'-cy 84.7 0.97 2.1E-05 52.5 4.3 66 128-198 662-736 (1163)
105 COG1768 Predicted phosphohydro 84.4 3.7 8.1E-05 37.7 6.9 84 151-250 41-126 (230)
106 cd07409 MPP_CD73_N CD73 ecto-5 83.8 1.7 3.6E-05 42.2 4.8 66 128-198 2-94 (281)
107 KOG2863|consensus 83.4 2.2 4.9E-05 42.9 5.5 74 127-200 1-90 (456)
108 PF04042 DNA_pol_E_B: DNA poly 82.5 2.2 4.7E-05 39.1 4.9 72 129-200 1-93 (209)
109 cd07406 MPP_CG11883_N Drosophi 82.1 2 4.4E-05 41.0 4.6 56 137-197 21-82 (257)
110 TIGR00282 metallophosphoestera 81.7 2.2 4.7E-05 41.4 4.7 66 128-198 2-71 (266)
111 KOG3339|consensus 78.4 22 0.00048 32.8 9.7 85 155-244 40-140 (211)
112 KOG2476|consensus 77.9 3.8 8.2E-05 42.5 5.2 69 126-195 5-75 (528)
113 COG3855 Fbp Uncharacterized pr 77.2 1.5 3.2E-05 45.4 2.0 41 155-200 192-232 (648)
114 cd07382 MPP_DR1281 Deinococcus 75.8 4.8 0.0001 38.7 5.1 66 128-198 1-70 (255)
115 COG0737 UshA 5'-nucleotidase/2 74.9 3.1 6.8E-05 43.9 3.9 68 127-199 27-116 (517)
116 KOG1432|consensus 74.7 6.3 0.00014 39.5 5.6 48 152-200 99-149 (379)
117 cd07407 MPP_YHR202W_N Saccharo 72.1 4.1 9E-05 39.7 3.7 66 128-198 7-97 (282)
118 cd07405 MPP_UshA_N Escherichia 70.3 4.6 9.9E-05 39.3 3.6 65 129-198 3-87 (285)
119 PTZ00422 glideosome-associated 67.7 7.7 0.00017 39.8 4.6 71 128-198 28-109 (394)
120 PRK09420 cpdB bifunctional 2', 66.7 6 0.00013 43.2 3.9 68 126-198 25-122 (649)
121 cd08162 MPP_PhoA_N Synechococc 66.3 7.7 0.00017 38.4 4.3 65 129-198 3-91 (313)
122 PRK09419 bifunctional 2',3'-cy 65.6 6.3 0.00014 46.0 4.0 67 127-198 42-139 (1163)
123 KOG3947|consensus 65.2 10 0.00023 36.9 4.7 67 127-200 62-128 (305)
124 TIGR01390 CycNucDiestase 2',3' 65.0 6.7 0.00014 42.6 3.8 66 128-198 4-99 (626)
125 PTZ00235 DNA polymerase epsilo 64.2 21 0.00045 35.1 6.7 73 127-199 28-123 (291)
126 PRK09558 ushA bifunctional UDP 57.8 12 0.00027 39.8 4.3 66 128-198 36-121 (551)
127 PRK11907 bifunctional 2',3'-cy 53.7 14 0.00031 41.4 4.0 67 127-198 116-213 (814)
128 KOG2310|consensus 52.1 38 0.00082 36.2 6.5 54 127-180 14-79 (646)
129 TIGR01530 nadN NAD pyrophospha 52.1 19 0.00041 38.5 4.6 40 154-198 50-94 (550)
130 KOG2679|consensus 51.4 14 0.00031 36.1 3.1 91 108-198 20-126 (336)
131 PF12641 Flavodoxin_3: Flavodo 41.0 1.2E+02 0.0026 27.0 7.2 102 130-250 2-116 (160)
132 PRK09418 bifunctional 2',3'-cy 37.6 33 0.00072 38.4 3.7 67 126-197 39-141 (780)
133 PF02875 Mur_ligase_C: Mur lig 36.2 92 0.002 24.3 5.2 70 126-195 11-82 (91)
134 PF06874 FBPase_2: Firmicute f 33.9 39 0.00084 36.6 3.4 42 155-201 186-227 (640)
135 KOG1378|consensus 31.7 79 0.0017 33.0 5.1 67 126-196 147-219 (452)
136 PF14164 YqzH: YqzH-like prote 30.6 1.8E+02 0.004 22.1 5.6 45 76-121 3-47 (64)
137 PF10083 DUF2321: Uncharacteri 29.4 18 0.0004 32.2 0.1 46 297-348 22-76 (158)
138 PF15007 CEP44: Centrosomal sp 28.8 43 0.00094 29.1 2.2 85 134-232 1-87 (131)
139 smart00854 PGA_cap Bacterial c 27.1 1E+02 0.0022 28.8 4.7 37 304-342 199-235 (239)
140 PF09587 PGA_cap: Bacterial ca 25.1 1.2E+02 0.0025 28.6 4.7 40 302-343 208-247 (250)
141 PF13258 DUF4049: Domain of un 24.9 88 0.0019 30.1 3.7 59 184-249 126-187 (318)
142 TIGR00282 metallophosphoestera 23.9 58 0.0013 31.6 2.4 39 156-198 2-41 (266)
143 cd00839 MPP_PAPs purple acid p 23.7 1.1E+02 0.0024 29.0 4.4 28 300-327 183-210 (294)
144 PF09637 Med18: Med18 protein; 23.2 1.2E+02 0.0026 29.0 4.4 37 298-337 139-175 (250)
145 COG0634 Hpt Hypoxanthine-guani 22.5 5.4E+02 0.012 23.5 8.1 78 96-177 8-116 (178)
146 cd07382 MPP_DR1281 Deinococcus 20.9 85 0.0019 30.2 2.9 37 156-193 1-37 (255)
No 1
>KOG0372|consensus
Probab=100.00 E-value=4.7e-84 Score=593.33 Aligned_cols=289 Identities=45% Similarity=0.903 Sum_probs=280.1
Q ss_pred hHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeeCCCeeEEecCCCCHHHHHHHHHhCCCCCCCce
Q psy1403 78 DLDLIIQKLLDLRGTRQRRNVRLEEKEIVSLIQISRKIFMSQPMLLELEPPLKICGDVHGQYTDLLRLFDHGKFPPASNY 157 (384)
Q Consensus 78 ~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~i~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~ 157 (384)
++|..|++|...+ .+.++++..||.+++++|.+|++++.++.|++|+||||||+.||+.+|+..|-+++++|
T Consensus 2 dldr~ie~L~~~~--------li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~Y 73 (303)
T KOG0372|consen 2 DLDRQIEQLRRCE--------LIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNY 73 (303)
T ss_pred cHHHHHHHHHhcC--------CCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCce
Confidence 5788999999875 68999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHhc-hHHHHHHHHHHccCCcEEEEc
Q psy1403 158 LFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECKRRYN-VKLWKTFTECFNCMPVAAIVD 236 (384)
Q Consensus 158 vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPl~a~i~ 236 (384)
+|||||||||.+|+|++.+|+.||++||+++.+||||||++.+++.|||++||.+||+ ..+|+++.+.|+.||++|+|+
T Consensus 74 LFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid 153 (303)
T KOG0372|consen 74 LFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIID 153 (303)
T ss_pred EeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheec
Confidence 9999999999999999999999999999999999999999999999999999999995 689999999999999999999
Q ss_pred CcEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEEE
Q psy1403 237 EKIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICR 316 (384)
Q Consensus 237 ~~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIR 316 (384)
+++||||||+||.+.+++||+.+.|..++|+.+.++|+|||||++. .+|..||||+|+.||.+++++|++.||+++|+|
T Consensus 154 ~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~-~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~R 232 (303)
T KOG0372|consen 154 GKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEG-PGWGLSPRGAGYLFGEDVVESFLEANGLSLICR 232 (303)
T ss_pred CcEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccC-CCcccCCCCccccccHHHHHHHHHhCChHHHHH
Confidence 9999999999999999999999999999999999999999999865 699999999999999999999999999999999
Q ss_pred eeeeeecCeEEecCCeEEEEeccCCCCCCCCCceEEEEEcCCCceEEEEecCCcccCCC
Q psy1403 317 AHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMSVDQNLMCSFQILKPTERNRAG 375 (384)
Q Consensus 317 gH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~~ 375 (384)
+||.+.+||++.++++++|||||||||+.++|.||||.++++....|++|+.++...++
T Consensus 233 aHQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~~ 291 (303)
T KOG0372|consen 233 AHQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESRG 291 (303)
T ss_pred HHHHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhcC
Confidence 99999999999999999999999999999999999999999999999999988866553
No 2
>KOG0373|consensus
Probab=100.00 E-value=1.2e-77 Score=543.61 Aligned_cols=289 Identities=43% Similarity=0.860 Sum_probs=280.2
Q ss_pred hhHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeeCCCeeEEecCCCCHHHHHHHHHhCCCCCCCc
Q psy1403 77 PDLDLIIQKLLDLRGTRQRRNVRLEEKEIVSLIQISRKIFMSQPMLLELEPPLKICGDVHGQYTDLLRLFDHGKFPPASN 156 (384)
Q Consensus 77 ~~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~i~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~ 156 (384)
.++|++|+...+++ .|+++++..||+.++++|..|.++..++.|+.|+||||||+.||+++|+..|--|.++
T Consensus 4 ~d~d~wi~~vk~ck--------yLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tn 75 (306)
T KOG0373|consen 4 MDLDQWIETVKKCK--------YLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTN 75 (306)
T ss_pred CCHHHHHHHHHHcC--------CCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcc
Confidence 47899999999887 6999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHhc-hHHHHHHHHHHccCCcEEEE
Q psy1403 157 YLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECKRRYN-VKLWKTFTECFNCMPVAAIV 235 (384)
Q Consensus 157 ~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPl~a~i 235 (384)
|+|+|||||||..|+|++.+|+.||.+||.++.+||||||.+.+.+.|||++||+.+|+ ...|+++.++|+.|+++|+|
T Consensus 76 YiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiI 155 (306)
T KOG0373|consen 76 YIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAII 155 (306)
T ss_pred eEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999995 68999999999999999999
Q ss_pred cCcEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEE
Q psy1403 236 DEKIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLIC 315 (384)
Q Consensus 236 ~~~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iI 315 (384)
+++++|||||+||++.++|+|+.|.|..++|+.+.++||+||||+. .+.|.-++||+|++||.+++.+|+..|++++|+
T Consensus 156 D~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPed-ve~W~vSpRGAGwlFGskVt~eF~~iN~L~Lic 234 (306)
T KOG0373|consen 156 DEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPED-VETWAVSPRGAGWLFGSKVTTEFNHINNLNLIC 234 (306)
T ss_pred cCcEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhh-hhhheeCCCCcceeechhhhHHHHhccchHHHH
Confidence 9999999999999999999999999999999999999999999985 799999999999999999999999999999999
Q ss_pred EeeeeeecCeEEecCCe-EEEEeccCCCCCCCCCceEEEEEcCCCceEEEEecCCcccCC
Q psy1403 316 RAHQVVEEGYEFFADKK-LVTLFSAPNYCGEFDNAGAMMSVDQNLMCSFQILKPTERNRA 374 (384)
Q Consensus 316 RgH~~~~~G~~~~~~~~-~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~ 374 (384)
|+||.+++||++.++.| ++|||||||||+.++|.|++|.+++++..++++|...+..+.
T Consensus 235 RaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~~~ 294 (306)
T KOG0373|consen 235 RAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDNSR 294 (306)
T ss_pred hHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCccc
Confidence 99999999999988877 999999999999999999999999999999999998887643
No 3
>KOG0374|consensus
Probab=100.00 E-value=2.2e-76 Score=579.32 Aligned_cols=294 Identities=67% Similarity=1.208 Sum_probs=281.8
Q ss_pred hhhHHHHHHHHHhccCCCCC--ccccCCHHHHHHHHHHHHHHHhhCCCeeeeCCCeeEEecCCCCHHHHHHHHHhCC-CC
Q psy1403 76 DPDLDLIIQKLLDLRGTRQR--RNVRLEEKEIVSLIQISRKIFMSQPMLLELEPPLKICGDVHGQYTDLLRLFDHGK-FP 152 (384)
Q Consensus 76 ~~~~~~~i~~l~~~~~~~~~--~~~~l~~~~i~~l~~~a~~il~~ep~ll~i~~~i~ViGDIHG~~~~L~~il~~~g-~~ 152 (384)
...++++|.+++........ ....++++++..||.++.++|..+|+++++++||.|+||||||+.||+++|+..| +|
T Consensus 6 ~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~p 85 (331)
T KOG0374|consen 6 SLDLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFP 85 (331)
T ss_pred hhhHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCC
Confidence 45678888888887543222 2455999999999999999999999999999999999999999999999999999 99
Q ss_pred CCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHhc-hHHHHHHHHHHccCCc
Q psy1403 153 PASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECKRRYN-VKLWKTFTECFNCMPV 231 (384)
Q Consensus 153 ~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPl 231 (384)
++++|||||||||||++|+|++.+|+++|++||+++++||||||.+.++..|||++||.++|+ ..+|+.|++.|++||+
T Consensus 86 p~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~ 165 (331)
T KOG0374|consen 86 PDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPL 165 (331)
T ss_pred CcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCch
Confidence 999999999999999999999999999999999999999999999999999999999999999 6999999999999999
Q ss_pred EEEEcCcEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCC
Q psy1403 232 AAIVDEKIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHM 311 (384)
Q Consensus 232 ~a~i~~~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l 311 (384)
+|+|+++++|+|||+||.+.++++++.|.||.++++.++++||+||||+....+|.+|.||.++.||++++++||+++++
T Consensus 166 ~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~l 245 (331)
T KOG0374|consen 166 AALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDL 245 (331)
T ss_pred hheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred ceEEEeeeeeecCeEEecCCeEEEEeccCCCCCCCCCceEEEEEcCCCceEEEEecCC
Q psy1403 312 DLICRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMSVDQNLMCSFQILKPT 369 (384)
Q Consensus 312 ~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 369 (384)
++||||||++++||+++.+++++||||||+|||++.|.||+|.||+++.++|.+++|.
T Consensus 246 dlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 246 DLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred ceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 9999999999999999999999999999999999999999999999999999999994
No 4
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=4.4e-75 Score=568.30 Aligned_cols=297 Identities=72% Similarity=1.315 Sum_probs=285.2
Q ss_pred hhhHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeeCCCeeEEecCCCCHHHHHHHHHhCCCCCCC
Q psy1403 76 DPDLDLIIQKLLDLRGTRQRRNVRLEEKEIVSLIQISRKIFMSQPMLLELEPPLKICGDVHGQYTDLLRLFDHGKFPPAS 155 (384)
Q Consensus 76 ~~~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~i~~~i~ViGDIHG~~~~L~~il~~~g~~~~~ 155 (384)
..+++.+|+++++.+...++....|+++++.+||++|+++|++||+++++++|++|+|||||++.+|.++|+..++++.+
T Consensus 8 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~ 87 (320)
T PTZ00480 8 EIDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPES 87 (320)
T ss_pred CcCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcc
Confidence 34689999999987654556666899999999999999999999999999999999999999999999999999999999
Q ss_pred ceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHhchHHHHHHHHHHccCCcEEEE
Q psy1403 156 NYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECKRRYNVKLWKTFTECFNCMPVAAIV 235 (384)
Q Consensus 156 ~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~a~i 235 (384)
+|||||||||||++|+||+.+++++|+.+|.++++||||||.+.++..|||+.|+..+|+..+|..+.++|++||++|++
T Consensus 88 ~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~~LPlaAiI 167 (320)
T PTZ00480 88 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVAALI 167 (320)
T ss_pred eEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHHHHHHHHHHHHhccHhhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEE
Q psy1403 236 DEKIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLIC 315 (384)
Q Consensus 236 ~~~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iI 315 (384)
++++|||||||+|.+.++++++.+.||.+.++.++++|+|||||.....+|.+|+||.|+.||++++++||++||+++||
T Consensus 168 ~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~Ii 247 (320)
T PTZ00480 168 DEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLIC 247 (320)
T ss_pred cCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEE
Confidence 99999999999999999999999999999999999999999999987789999999999999999999999999999999
Q ss_pred EeeeeeecCeEEecCCeEEEEeccCCCCCCCCCceEEEEEcCCCceEEEEecCCccc
Q psy1403 316 RAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMSVDQNLMCSFQILKPTERN 372 (384)
Q Consensus 316 RgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 372 (384)
||||++++||++.++++|+||||||||||..+|.||+|.|++++.+.|++|+|.+..
T Consensus 248 R~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 304 (320)
T PTZ00480 248 RAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQG 304 (320)
T ss_pred EcCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccc
Confidence 999999999999999999999999999999999999999999999999999987764
No 5
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=7e-74 Score=556.28 Aligned_cols=291 Identities=78% Similarity=1.381 Sum_probs=280.9
Q ss_pred HHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeeCCCeeEEecCCCCHHHHHHHHHhCCCCCCCceE
Q psy1403 79 LDLIIQKLLDLRGTRQRRNVRLEEKEIVSLIQISRKIFMSQPMLLELEPPLKICGDVHGQYTDLLRLFDHGKFPPASNYL 158 (384)
Q Consensus 79 ~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~i~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~v 158 (384)
++.+|+++++.+....+....++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..++++.++||
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 67889999987655556777899999999999999999999999999999999999999999999999999999999999
Q ss_pred eecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHhchHHHHHHHHHHccCCcEEEEcCc
Q psy1403 159 FLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECKRRYNVKLWKTFTECFNCMPVAAIVDEK 238 (384)
Q Consensus 159 fLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~a~i~~~ 238 (384)
|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||++|+..+|+..+|..+.++|++||++|+++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~~~ 161 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEK 161 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEEEee
Q psy1403 239 IFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICRAH 318 (384)
Q Consensus 239 il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH 318 (384)
++|||||++|.+.++++++.++||.+.++.+.++|+|||||.....+|.+|+||.|+.||++++++||++||+++|||||
T Consensus 162 i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 241 (293)
T cd07414 162 IFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAH 241 (293)
T ss_pred EEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECC
Confidence 99999999999999999999999999999999999999999987889999999999999999999999999999999999
Q ss_pred eeeecCeEEecCCeEEEEeccCCCCCCCCCceEEEEEcCCCceEEEEecCC
Q psy1403 319 QVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMSVDQNLMCSFQILKPT 369 (384)
Q Consensus 319 ~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 369 (384)
|++++||+++++++|+||||||||||..+|+||+|.|++++.++|++|+|.
T Consensus 242 e~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 242 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred ccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999999999999999999999999999999874
No 6
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=1.6e-73 Score=553.42 Aligned_cols=291 Identities=58% Similarity=1.111 Sum_probs=279.2
Q ss_pred hHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeeCCCeeEEecCCCCHHHHHHHHHhCCCCCCCce
Q psy1403 78 DLDLIIQKLLDLRGTRQRRNVRLEEKEIVSLIQISRKIFMSQPMLLELEPPLKICGDVHGQYTDLLRLFDHGKFPPASNY 157 (384)
Q Consensus 78 ~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~i~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~ 157 (384)
-++.+|+++++......+....++++++.+||++|+++|++||+++++++|++|+||||||+.+|.++|+..++++.++|
T Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~ 82 (294)
T PTZ00244 3 LVQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNY 82 (294)
T ss_pred hHHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccE
Confidence 46889999998765555666679999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHhchHHHHHHHHHHccCCcEEEEcC
Q psy1403 158 LFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECKRRYNVKLWKTFTECFNCMPVAAIVDE 237 (384)
Q Consensus 158 vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~a~i~~ 237 (384)
+|||||||||++|+||+.+++++|+.+|.++++||||||.+.++..|||++++..+|+..+|+.+.++|+.||++|++++
T Consensus 83 lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaaii~~ 162 (294)
T PTZ00244 83 LFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCVISE 162 (294)
T ss_pred EEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEEEe
Q psy1403 238 KIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICRA 317 (384)
Q Consensus 238 ~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRg 317 (384)
+++|||||++|.+.++++++.++||.+.++.++++|++||||.....+|.+++||.|+.||++++++||++||+++||||
T Consensus 163 ~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 242 (294)
T PTZ00244 163 KIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRA 242 (294)
T ss_pred eeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEc
Confidence 99999999999999999999999999999999999999999997778999999999999999999999999999999999
Q ss_pred eeeeecCeEEecCCeEEEEeccCCCCCCCCCceEEEEEcCCCceEEEEecC
Q psy1403 318 HQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMSVDQNLMCSFQILKP 368 (384)
Q Consensus 318 H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 368 (384)
||++++||+++++++|+||||||||||..+|.||+|.|++++.++|++|+.
T Consensus 243 Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 243 HQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred CccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 999999999999999999999999999999999999999999999998764
No 7
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=9.3e-73 Score=552.60 Aligned_cols=284 Identities=33% Similarity=0.614 Sum_probs=261.2
Q ss_pred CChhhHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeeCC----CeeEEecCCCCHHHHHHHHHhC
Q psy1403 74 MADPDLDLIIQKLLDLRGTRQRRNVRLEEKEIVSLIQISRKIFMSQPMLLELEP----PLKICGDVHGQYTDLLRLFDHG 149 (384)
Q Consensus 74 ~~~~~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~i~~----~i~ViGDIHG~~~~L~~il~~~ 149 (384)
++..+++.+|+++++.. .|+++++.+||++|+++|++||+++++++ |++||||||||+.+|.++|+..
T Consensus 2 ~~~~~~~~~i~~~~~~~--------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~ 73 (321)
T cd07420 2 LTKDHIDALIEAFKEKQ--------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKN 73 (321)
T ss_pred CCHHHHHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHc
Confidence 34567899999999754 58999999999999999999999999976 8999999999999999999999
Q ss_pred CCCCC-CceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHhc---hHHHHHHHHH
Q psy1403 150 KFPPA-SNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECKRRYN---VKLWKTFTEC 225 (384)
Q Consensus 150 g~~~~-~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~---~~~~~~~~~~ 225 (384)
|+++. ++|||||||||||++|+||+.+|++||+.+|+++++||||||.+.++..|||++||..+|+ ..+|+.+.++
T Consensus 74 g~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~ 153 (321)
T cd07420 74 GLPSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDV 153 (321)
T ss_pred CCCCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHH
Confidence 99864 6799999999999999999999999999999999999999999999999999999999997 7899999999
Q ss_pred HccCCcEEEEcCcEEEecCCCCCCCCChhhhcCCCCCCC-----CCC----------------------cchHHHhhhcC
Q psy1403 226 FNCMPVAAIVDEKIFCCHGGLSPDLDSFEDIKRIPRPTD-----VPD----------------------QGLLCDLLWSD 278 (384)
Q Consensus 226 f~~LPl~a~i~~~il~vHgGisp~~~~l~~i~~i~r~~~-----~~~----------------------~~~~~dlLWsd 278 (384)
|++||++|++++++|||||||+| ..++++|+.|+|+.. .|. .+++.|+||||
T Consensus 154 F~~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSD 232 (321)
T cd07420 154 FSWLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSD 232 (321)
T ss_pred HHhCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecC
Confidence 99999999999999999999997 578999999887421 111 14678999999
Q ss_pred CCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEEEeeeeeecCeEEecCCeEEEEeccCCCCCCCCCceEEEEEcCC
Q psy1403 279 PDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMSVDQN 358 (384)
Q Consensus 279 p~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~ 358 (384)
|......|.+++||.|+.||++++++||++|++++||||||++++||++.++++|+||||||||||..+|.||+|.|+++
T Consensus 233 P~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~ 312 (321)
T cd07420 233 PKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPD 312 (321)
T ss_pred CccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCC
Confidence 98655557788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEe
Q psy1403 359 LMCSFQIL 366 (384)
Q Consensus 359 ~~~~~~~~ 366 (384)
+.++|.+|
T Consensus 313 ~~~~f~~~ 320 (321)
T cd07420 313 LTPHFVQY 320 (321)
T ss_pred CceeEEEe
Confidence 99999877
No 8
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=1.1e-72 Score=546.05 Aligned_cols=283 Identities=48% Similarity=0.925 Sum_probs=272.4
Q ss_pred HHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeeCCCeeEEecCCCCHHHHHHHHHhCCCCCCCceE
Q psy1403 79 LDLIIQKLLDLRGTRQRRNVRLEEKEIVSLIQISRKIFMSQPMLLELEPPLKICGDVHGQYTDLLRLFDHGKFPPASNYL 158 (384)
Q Consensus 79 ~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~i~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~v 158 (384)
++++|+++++.. .++++++.+||++|+++|++||+++++++|++|+||||||+.+|.++|+..++++.++||
T Consensus 2 ~~~~~~~~~~~~--------~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~l 73 (285)
T cd07415 2 LDKWIEQLKKCE--------LLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYL 73 (285)
T ss_pred HHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEE
Confidence 677888888754 589999999999999999999999999999999999999999999999999999999999
Q ss_pred eecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHhch-HHHHHHHHHHccCCcEEEEcC
Q psy1403 159 FLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECKRRYNV-KLWKTFTECFNCMPVAAIVDE 237 (384)
Q Consensus 159 fLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~-~~~~~~~~~f~~LPl~a~i~~ 237 (384)
|||||||||++|+|++.++++||+.+|.++++||||||.+.++..|||++||..+|+. .+|+.+.++|++||++|++++
T Consensus 74 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~ 153 (285)
T cd07415 74 FLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDN 153 (285)
T ss_pred EEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCC
Confidence 9999999999999999999999999999999999999999999999999999999974 899999999999999999999
Q ss_pred cEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEEEe
Q psy1403 238 KIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICRA 317 (384)
Q Consensus 238 ~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRg 317 (384)
+++||||||+|.+.++++++.++|+.+.+..+.+.|+|||||... .+|.+|+||.|+.||++++++||++||+++||||
T Consensus 154 ~i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 232 (285)
T cd07415 154 QIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDI-EGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRA 232 (285)
T ss_pred eEEEEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCcc-CCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEc
Confidence 999999999999999999999999999999999999999999864 7999999999999999999999999999999999
Q ss_pred eeeeecCeEEecCCeEEEEeccCCCCCCCCCceEEEEEcCCCceEEEEecCCc
Q psy1403 318 HQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMSVDQNLMCSFQILKPTE 370 (384)
Q Consensus 318 H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~ 370 (384)
||++++||++.++++|+|||||||||+..+|.||+|.|+++++++|.+|+|.+
T Consensus 233 He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 233 HQLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred CccccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 99999999999999999999999999999999999999999999999999853
No 9
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=8.2e-72 Score=543.20 Aligned_cols=286 Identities=41% Similarity=0.858 Sum_probs=272.2
Q ss_pred hHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeeCCCeeEEecCCCCHHHHHHHHHhCCCCCCCce
Q psy1403 78 DLDLIIQKLLDLRGTRQRRNVRLEEKEIVSLIQISRKIFMSQPMLLELEPPLKICGDVHGQYTDLLRLFDHGKFPPASNY 157 (384)
Q Consensus 78 ~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~i~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~ 157 (384)
+++.+|+++++.. .++++++.+||++|+++|++||+++++++|++|+||||||+.+|.++|+..+.++.++|
T Consensus 2 ~~~~~~~~~~~~~--------~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~ 73 (303)
T PTZ00239 2 DIDRHIATLLNGG--------CLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANY 73 (303)
T ss_pred CHHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceE
Confidence 4788899988754 58999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHhch-HHHHHHHHHHccCCcEEEEc
Q psy1403 158 LFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECKRRYNV-KLWKTFTECFNCMPVAAIVD 236 (384)
Q Consensus 158 vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~-~~~~~~~~~f~~LPl~a~i~ 236 (384)
+|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||++|+.++|+. .+|+.+.++|++||++|+++
T Consensus 74 lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~ 153 (303)
T PTZ00239 74 IFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIE 153 (303)
T ss_pred EEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEc
Confidence 99999999999999999999999999999999999999999999999999999999974 79999999999999999999
Q ss_pred CcEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEEE
Q psy1403 237 EKIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICR 316 (384)
Q Consensus 237 ~~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIR 316 (384)
++++|||||++|.+.++++++.+.|+.++|..+.++|+|||||.. ..+|.+|+||.|+.||++++++||++||+++|||
T Consensus 154 ~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 232 (303)
T PTZ00239 154 GQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEE-VEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICR 232 (303)
T ss_pred CeEEEEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccc-cCCCccCCCCCccccCHHHHHHHHHHCCCcEEEE
Confidence 999999999999999999999999999999999999999999984 5789999999999999999999999999999999
Q ss_pred eeeeeecCeEEecC-CeEEEEeccCCCCCCCCCceEEEEEcCCCceEEEEecCCccc
Q psy1403 317 AHQVVEEGYEFFAD-KKLVTLFSAPNYCGEFDNAGAMMSVDQNLMCSFQILKPTERN 372 (384)
Q Consensus 317 gH~~~~~G~~~~~~-~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 372 (384)
|||++++||++.++ ++|+|||||||||+..+|.||+|.+++++.+.|++|+|.+..
T Consensus 233 ~He~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~ 289 (303)
T PTZ00239 233 AHQLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPES 289 (303)
T ss_pred cChhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcc
Confidence 99999999998664 559999999999999999999999999999999999997764
No 10
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=8.5e-71 Score=539.25 Aligned_cols=291 Identities=38% Similarity=0.755 Sum_probs=274.0
Q ss_pred CChhhHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeeCCC----eeEEecCCCCHHHHHHHHHhC
Q psy1403 74 MADPDLDLIIQKLLDLRGTRQRRNVRLEEKEIVSLIQISRKIFMSQPMLLELEPP----LKICGDVHGQYTDLLRLFDHG 149 (384)
Q Consensus 74 ~~~~~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~i~~~----i~ViGDIHG~~~~L~~il~~~ 149 (384)
++...++++++++...+ .|+++++.+||++|+++|++||++++++.| ++||||||||+.+|.++|+..
T Consensus 11 i~~~~~~~~~~~~~~~~--------~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~ 82 (316)
T cd07417 11 VTLEFVKEMIEWFKDQK--------KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELN 82 (316)
T ss_pred CCHHHHHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhc
Confidence 56678899999988754 589999999999999999999999999866 999999999999999999999
Q ss_pred CCCCCC-ceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHhchHHHHHHHHHHcc
Q psy1403 150 KFPPAS-NYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECKRRYNVKLWKTFTECFNC 228 (384)
Q Consensus 150 g~~~~~-~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~ 228 (384)
|+++.+ +|+|||||||||++|+||+.+|++||+.+|.++++||||||.+.++..|||..|+..+|+..+|..+.++|++
T Consensus 83 g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~~l~~~~~~~f~~ 162 (316)
T cd07417 83 GLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNEQMFDLFSEVFNW 162 (316)
T ss_pred CCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccHHHHHHHHHHHHh
Confidence 987654 6999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCcEEEecCCC-CCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHH
Q psy1403 229 MPVAAIVDEKIFCCHGGL-SPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLD 307 (384)
Q Consensus 229 LPl~a~i~~~il~vHgGi-sp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~ 307 (384)
||++++++++++|||||+ +|...++++++.+.|+.+.+..++++|+|||||... .+|.+|+||.|+.||++++++||+
T Consensus 163 LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~s~Rg~g~~fg~~~~~~Fl~ 241 (316)
T cd07417 163 LPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQ-PGRSPSKRGVGCQFGPDVTKRFLE 241 (316)
T ss_pred chHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCC-CCCCccCCCCceEeCHHHHHHHHH
Confidence 999999999999999999 567889999999999999999999999999999854 689999999999999999999999
Q ss_pred hcCCceEEEeeeeeecCeEEecCCeEEEEeccCCCCCCCCCceEEEEEcC-CCceEEEEecCCcccC
Q psy1403 308 KHHMDLICRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMSVDQ-NLMCSFQILKPTERNR 373 (384)
Q Consensus 308 ~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~-~~~~~~~~~~~~~~~~ 373 (384)
+||+++||||||++++||++.++++|+|||||||||+..+|.||+|.|++ ++++.|++|+|.+...
T Consensus 242 ~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~~ 308 (316)
T cd07417 242 ENNLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHPN 308 (316)
T ss_pred HcCCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999 8999999999875443
No 11
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=2.6e-70 Score=526.77 Aligned_cols=270 Identities=54% Similarity=1.035 Sum_probs=262.8
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeeeCCCeeEEecCCCCHHHHHHHHHhCCCCCCCceEeecceeccCCCcHHHHHHHHH
Q psy1403 100 LEEKEIVSLIQISRKIFMSQPMLLELEPPLKICGDVHGQYTDLLRLFDHGKFPPASNYLFLGDYVDRGKQSLETICLLLA 179 (384)
Q Consensus 100 l~~~~i~~l~~~a~~il~~ep~ll~i~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~ 179 (384)
++++++.+||++|+++|++||+++++++|++|+||||||+.+|.++|+..+.++.++|||||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHhchHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChhhhcCC
Q psy1403 180 YKIKHPETFFLLRGNHESANINRIYGFYDECKRRYNVKLWKTFTECFNCMPVAAIVDEKIFCCHGGLSPDLDSFEDIKRI 259 (384)
Q Consensus 180 Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~a~i~~~il~vHgGisp~~~~l~~i~~i 259 (384)
+|+.+|.++++||||||.+.++..|||++|+..+|+..+|+.+.++|++||++|+++++++|||||++|.+.++++++.+
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i 160 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKL 160 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcchHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEEEeeeeeecCeEEecCCeEEEEecc
Q psy1403 260 PRPTDVPDQGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQVVEEGYEFFADKKLVTLFSA 339 (384)
Q Consensus 260 ~r~~~~~~~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa 339 (384)
.||.+.++.+.+.|+|||||.....+|.+|+||.++.||++++++||++||+++||||||++++||+++++++|+|||||
T Consensus 161 ~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa 240 (271)
T smart00156 161 KRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSA 240 (271)
T ss_pred cCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECC
Confidence 99999999999999999999877889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCceEEEEEcCCCceEEEEecCC
Q psy1403 340 PNYCGEFDNAGAMMSVDQNLMCSFQILKPT 369 (384)
Q Consensus 340 ~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 369 (384)
||||+..+|.||+|.+++++.++|.+|+|.
T Consensus 241 ~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 241 PNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred cccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999999999874
No 12
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=3.8e-70 Score=533.14 Aligned_cols=283 Identities=39% Similarity=0.787 Sum_probs=266.2
Q ss_pred HHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeeCCCeeEEecCCCCHHHHHHHHHhCCCCCCCceE
Q psy1403 79 LDLIIQKLLDLRGTRQRRNVRLEEKEIVSLIQISRKIFMSQPMLLELEPPLKICGDVHGQYTDLLRLFDHGKFPPASNYL 158 (384)
Q Consensus 79 ~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~i~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~v 158 (384)
++.+++.+.+.. .|+++++.+||++|+++|++||+++++++|++|+||||||+.+|.++|+..+.++.++|+
T Consensus 3 ~~~~~~~~~~~~--------~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~yl 74 (305)
T cd07416 3 IDVLKAHFMREG--------RLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYL 74 (305)
T ss_pred HHHHHHHHHcCC--------CCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEE
Confidence 566777777654 589999999999999999999999999999999999999999999999999999999999
Q ss_pred eecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHhchHHHHHHHHHHccCCcEEEEcCc
Q psy1403 159 FLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECKRRYNVKLWKTFTECFNCMPVAAIVDEK 238 (384)
Q Consensus 159 fLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~a~i~~~ 238 (384)
|||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+..+|..+.++|++||++|+++++
T Consensus 75 FLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPlaaii~~~ 154 (305)
T cd07416 75 FLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMEAFDCLPLAALMNQQ 154 (305)
T ss_pred EECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccHHHHHHHHHHHhhccceeEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCC------CCCCC-CCCcccccChhhHHHHHHhcCC
Q psy1403 239 IFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNIL------DWGDN-DRGVSYTFGPNVVKTFLDKHHM 311 (384)
Q Consensus 239 il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~------~~~~~-~rG~~~~fg~~~~~~fl~~~~l 311 (384)
++|||||++|.+.++++++.++|+.+.+..++++|+|||||..... +|.++ +||.|+.||++++++||++||+
T Consensus 155 i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l 234 (305)
T cd07416 155 FLCVHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNL 234 (305)
T ss_pred EEEEcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999975432 47765 8999999999999999999999
Q ss_pred ceEEEeeeeeecCeEEecCC------eEEEEeccCCCCCCCCCceEEEEEcCCCceEEEEecCCc
Q psy1403 312 DLICRAHQVVEEGYEFFADK------KLVTLFSAPNYCGEFDNAGAMMSVDQNLMCSFQILKPTE 370 (384)
Q Consensus 312 ~~iIRgH~~~~~G~~~~~~~------~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~ 370 (384)
++||||||++++||++++++ +|+||||||||||.++|+||+|.|+++. ..|++|.+.+
T Consensus 235 ~~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~ 298 (305)
T cd07416 235 LSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSP 298 (305)
T ss_pred eEEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCC
Confidence 99999999999999998876 8999999999999999999999999985 6899998765
No 13
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=1.9e-68 Score=522.94 Aligned_cols=286 Identities=44% Similarity=0.831 Sum_probs=264.0
Q ss_pred HHHHHhccCCCC--CccccCCHHHHHHHHHHHHHHHhhCCCeeeeCCCeeEEecCCCCHHHHHHHHHhCCCCCC------
Q psy1403 83 IQKLLDLRGTRQ--RRNVRLEEKEIVSLIQISRKIFMSQPMLLELEPPLKICGDVHGQYTDLLRLFDHGKFPPA------ 154 (384)
Q Consensus 83 i~~l~~~~~~~~--~~~~~l~~~~i~~l~~~a~~il~~ep~ll~i~~~i~ViGDIHG~~~~L~~il~~~g~~~~------ 154 (384)
|.++++.....+ ..+..++++++.+||++|+++|++||+++++++|++||||||||+++|.++|+..++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~ 81 (311)
T cd07419 2 ITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDI 81 (311)
T ss_pred hHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCC
Confidence 566666554333 445679999999999999999999999999999999999999999999999999998754
Q ss_pred --CceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHhch------HHHHHHHHHH
Q psy1403 155 --SNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECKRRYNV------KLWKTFTECF 226 (384)
Q Consensus 155 --~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~------~~~~~~~~~f 226 (384)
.+|||||||||||++|+||+.+|++|++.+|.++++||||||.+.++..|||..++..+|+. .+|..+.++|
T Consensus 82 ~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f 161 (311)
T cd07419 82 EYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLF 161 (311)
T ss_pred cCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999864 6899999999
Q ss_pred ccCCcEEEEcCcEEEecCCCCCCCCChhhhcCCCCCC-CCCCcchHHHhhhcCCCCC--CCCCCCCC---CCcc--cccC
Q psy1403 227 NCMPVAAIVDEKIFCCHGGLSPDLDSFEDIKRIPRPT-DVPDQGLLCDLLWSDPDNN--ILDWGDND---RGVS--YTFG 298 (384)
Q Consensus 227 ~~LPl~a~i~~~il~vHgGisp~~~~l~~i~~i~r~~-~~~~~~~~~dlLWsdp~~~--~~~~~~~~---rG~~--~~fg 298 (384)
++||++++++++++|||||++|.+.++++++.+.||. ..+..+.+.|++||||... ..+|.+++ ||.| +.||
T Consensus 162 ~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg 241 (311)
T cd07419 162 EWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFG 241 (311)
T ss_pred HhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeEC
Confidence 9999999999999999999999999999999999997 4566788999999999854 45787776 9988 7999
Q ss_pred hhhHHHHHHhcCCceEEEeeeeeecCeEEecCCeEEEEeccCCCCCCCCCceEEEEEcCCCceEEEEecC
Q psy1403 299 PNVVKTFLDKHHMDLICRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMSVDQNLMCSFQILKP 368 (384)
Q Consensus 299 ~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 368 (384)
++++++||++||+++||||||++++||++.++++|+|||||||||+.++|.||++.|++++.+++++++|
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred HHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999987
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=5.5e-66 Score=512.30 Aligned_cols=298 Identities=33% Similarity=0.608 Sum_probs=262.7
Q ss_pred CChhhHHHHHHHHHhccCCC--CCccccCCHHHHHHHHHHHHHHHhhCCCeeeeC----CCeeEEecCCCCHHHHHHHHH
Q psy1403 74 MADPDLDLIIQKLLDLRGTR--QRRNVRLEEKEIVSLIQISRKIFMSQPMLLELE----PPLKICGDVHGQYTDLLRLFD 147 (384)
Q Consensus 74 ~~~~~~~~~i~~l~~~~~~~--~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~i~----~~i~ViGDIHG~~~~L~~il~ 147 (384)
.+...++.+|.++......- ......++.+++.+||++|+++|++||++++++ +|++|||||||++.+|.++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~ 86 (377)
T cd07418 7 LTNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLE 86 (377)
T ss_pred cCHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHH
Confidence 46678899999987653221 122235789999999999999999999999998 899999999999999999999
Q ss_pred hCCCCCCC-ceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHhch---HHHHHHH
Q psy1403 148 HGKFPPAS-NYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECKRRYNV---KLWKTFT 223 (384)
Q Consensus 148 ~~g~~~~~-~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~---~~~~~~~ 223 (384)
..|+++.+ .|||||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||.+|+..+|+. .+|+.+.
T Consensus 87 ~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~ 166 (377)
T cd07418 87 DAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCL 166 (377)
T ss_pred HhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHH
Confidence 99998754 5999999999999999999999999999999999999999999999999999999999964 7999999
Q ss_pred HHHccCCcEEEEcCcEEEecCCC---------------------------CCCCCChhhhcCCCCCC-CCCCcc---hHH
Q psy1403 224 ECFNCMPVAAIVDEKIFCCHGGL---------------------------SPDLDSFEDIKRIPRPT-DVPDQG---LLC 272 (384)
Q Consensus 224 ~~f~~LPl~a~i~~~il~vHgGi---------------------------sp~~~~l~~i~~i~r~~-~~~~~~---~~~ 272 (384)
++|++||++|++++++||||||| +|.+.++++|+.++|+. +.+..+ +++
T Consensus 167 ~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~ 246 (377)
T cd07418 167 GCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPG 246 (377)
T ss_pred HHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccccce
Confidence 99999999999999999999999 44567899999999974 666554 478
Q ss_pred HhhhcCCCCCCCCCCCC-CCCcccccChhhHHHHHHhcCCceEEEeeee------------eecCeEEecC---CeEEEE
Q psy1403 273 DLLWSDPDNNILDWGDN-DRGVSYTFGPNVVKTFLDKHHMDLICRAHQV------------VEEGYEFFAD---KKLVTL 336 (384)
Q Consensus 273 dlLWsdp~~~~~~~~~~-~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~------------~~~G~~~~~~---~~~iTv 336 (384)
|+|||||... .+|.++ +||.|+.||++++++||++|++++||||||+ +++||++.++ ++|+||
T Consensus 247 dlLWSDP~~~-~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTv 325 (377)
T cd07418 247 DVLWSDPSLT-PGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLITL 325 (377)
T ss_pred eeEeeCCccC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEEE
Confidence 9999999864 677776 7999999999999999999999999999996 6799999876 999999
Q ss_pred eccCCCC------CCCCCceEEEEEcCCC--ceEEEEecCCccc
Q psy1403 337 FSAPNYC------GEFDNAGAMMSVDQNL--MCSFQILKPTERN 372 (384)
Q Consensus 337 fSa~~y~------~~~~n~ga~l~i~~~~--~~~~~~~~~~~~~ 372 (384)
||||||| +.++|.||+|.++.+. ..+|++|+.+.+.
T Consensus 326 FSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~~~~ 369 (377)
T cd07418 326 FSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAVKPR 369 (377)
T ss_pred ecCCccccccccccccCcceEEEEEecCCCCCccceEeeccCCC
Confidence 9999999 6789999999996654 6888888766444
No 15
>KOG0371|consensus
Probab=100.00 E-value=6.3e-68 Score=489.70 Aligned_cols=287 Identities=45% Similarity=0.883 Sum_probs=278.1
Q ss_pred hhHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeeCCCeeEEecCCCCHHHHHHHHHhCCCCCCCc
Q psy1403 77 PDLDLIIQKLLDLRGTRQRRNVRLEEKEIVSLIQISRKIFMSQPMLLELEPPLKICGDVHGQYTDLLRLFDHGKFPPASN 156 (384)
Q Consensus 77 ~~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~i~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~ 156 (384)
.+++..|+.|.+++ .+++.++..+|+.|+++|.+|.++..+..|++|+||+||||++|+++|+..|..++.+
T Consensus 18 ~~vd~~ie~L~~ck--------~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtn 89 (319)
T KOG0371|consen 18 LDVDPWIEQLYKCK--------PLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTN 89 (319)
T ss_pred cccccchHHHHhcC--------CCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcc
Confidence 46888999999987 6899999999999999999999999999999999999999999999999999999999
Q ss_pred eEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHh-chHHHHHHHHHHccCCcEEEE
Q psy1403 157 YLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECKRRY-NVKLWKTFTECFNCMPVAAIV 235 (384)
Q Consensus 157 ~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~-~~~~~~~~~~~f~~LPl~a~i 235 (384)
|+|+|||||||++|.|++.+|.++|++||++|.+||||||.+.+++.|||++||.++| +..+|+.|.+.|+.+|++|+|
T Consensus 90 ylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali 169 (319)
T KOG0371|consen 90 YLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALI 169 (319)
T ss_pred eeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhh
Confidence 9999999999999999999999999999999999999999999999999999999999 578999999999999999999
Q ss_pred cCcEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEE
Q psy1403 236 DEKIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLIC 315 (384)
Q Consensus 236 ~~~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iI 315 (384)
+++++|+|||+||.+.+++.++.+.|..++|.++.++|||||||+. .-+|..++||+++.||++..++|-+++|++++-
T Consensus 170 ~~~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpdd-r~gwg~sprgag~tfg~di~~~fn~~n~lslis 248 (319)
T KOG0371|consen 170 ESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHKNGLSLIS 248 (319)
T ss_pred ccceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCccc-CCCCCCCCCCCCcccchhhHHHhhccCCchHhH
Confidence 9999999999999999999999999999999999999999999984 589999999999999999999999999999999
Q ss_pred EeeeeeecCeEEecCCeEEEEeccCCCCCCCCCceEEEEEcCCCceEEEEecCCccc
Q psy1403 316 RAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMSVDQNLMCSFQILKPTERN 372 (384)
Q Consensus 316 RgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 372 (384)
|+||.+++||.|.....++|+|||||||+.++|.+|+|.++++....|.+|+|++.+
T Consensus 249 Rahqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k 305 (319)
T KOG0371|consen 249 RAHQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRK 305 (319)
T ss_pred HHHHHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccc
Confidence 999999999999999999999999999999999999999999999999999997643
No 16
>KOG0375|consensus
Probab=100.00 E-value=4.9e-64 Score=480.98 Aligned_cols=269 Identities=38% Similarity=0.803 Sum_probs=253.0
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeeCCCeeEEecCCCCHHHHHHHHHhCCCCCCCceEeecceeccCCCcHHHHHHHH
Q psy1403 99 RLEEKEIVSLIQISRKIFMSQPMLLELEPPLKICGDVHGQYTDLLRLFDHGKFPPASNYLFLGDYVDRGKQSLETICLLL 178 (384)
Q Consensus 99 ~l~~~~i~~l~~~a~~il~~ep~ll~i~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~ 178 (384)
.++++..+.|+.++.++|++|++++++++||.|+|||||||.||+++|+..|-|.+++|+|||||||||..|+||+.+|.
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLw 139 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLW 139 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHhchHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChhhhcC
Q psy1403 179 AYKIKHPETFFLLRGNHESANINRIYGFYDECKRRYNVKLWKTFTECFNCMPVAAIVDEKIFCCHGGLSPDLDSFEDIKR 258 (384)
Q Consensus 179 ~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~a~i~~~il~vHgGisp~~~~l~~i~~ 258 (384)
+||+.||..+++||||||++.++..+.|..||.-+|+.++|+...+.|++||+||+.++++||||||+||++.++++|+.
T Consensus 140 sLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~ 219 (517)
T KOG0375|consen 140 SLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRK 219 (517)
T ss_pred HHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcchHHHhhhcCCCCCC------CCCCCC-CCCcccccChhhHHHHHHhcCCceEEEeeeeeecCeEEecCC
Q psy1403 259 IPRPTDVPDQGLLCDLLWSDPDNNI------LDWGDN-DRGVSYTFGPNVVKTFLDKHHMDLICRAHQVVEEGYEFFADK 331 (384)
Q Consensus 259 i~r~~~~~~~~~~~dlLWsdp~~~~------~~~~~~-~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~ 331 (384)
+.|..++|.-|++||||||||.++. +.|..| -||++|.|...++.+||+.||+--|||+|+.++-||..+.+.
T Consensus 220 l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrks 299 (517)
T KOG0375|consen 220 LDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKS 299 (517)
T ss_pred hhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhcc
Confidence 9999999999999999999997542 234444 699999999999999999999999999999999999987554
Q ss_pred ------eEEEEeccCCCCCCCCCceEEEEEcCCCceEEEEecC
Q psy1403 332 ------KLVTLFSAPNYCGEFDNAGAMMSVDQNLMCSFQILKP 368 (384)
Q Consensus 332 ------~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 368 (384)
.+|||||||||-+.++|+||||..+++. .++.+|.-
T Consensus 300 qttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnNV-MNIRQFnc 341 (517)
T KOG0375|consen 300 QTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNC 341 (517)
T ss_pred cccCCchheeeecCCchhhhhccHHHHhhhhccc-ceeeccCC
Confidence 5899999999999999999999987664 45666644
No 17
>KOG0377|consensus
Probab=100.00 E-value=7.7e-56 Score=433.10 Aligned_cols=302 Identities=31% Similarity=0.603 Sum_probs=272.3
Q ss_pred CCCCccchhccccccCCChhhHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeeC----CCeeEEe
Q psy1403 58 KLGDNTIFNKISKSVSMADPDLDLIIQKLLDLRGTRQRRNVRLEEKEIVSLIQISRKIFMSQPMLLELE----PPLKICG 133 (384)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~i~----~~i~ViG 133 (384)
....+.+|++.+.+++....+++.+|+.+...+ .|++..+..|+.+|+++|++.|++-+++ ..|+|||
T Consensus 100 sidv~d~y~Gp~ls~Pl~~~~i~~lieaFk~kq--------~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCG 171 (631)
T KOG0377|consen 100 SIDVPDSYNGPKLSLPLRKNHIDLLIEAFKKKQ--------RLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICG 171 (631)
T ss_pred ceecCccCCCcccccCcCchHHHHHHHHHHHhh--------hccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEec
Confidence 344455888888888999999999999998765 6999999999999999999999998874 4699999
Q ss_pred cCCCCHHHHHHHHHhCCCCCCC-ceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHH
Q psy1403 134 DVHGQYTDLLRLFDHGKFPPAS-NYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECKR 212 (384)
Q Consensus 134 DIHG~~~~L~~il~~~g~~~~~-~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~ 212 (384)
|+||.++||.-+|-+.|+|..+ .|||.||+||||.+|+|||.+|+++-+.||..+++-|||||+.++|-.|||..|+..
T Consensus 172 DLHGklDDL~~I~yKNGlPS~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~ 251 (631)
T KOG0377|consen 172 DLHGKLDDLLVILYKNGLPSSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVES 251 (631)
T ss_pred cccccccceEEEEecCCCCCCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHH
Confidence 9999999999999999999775 599999999999999999999999999999999999999999999999999999999
Q ss_pred Hh---chHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChhhhcCCCCCCC-----CC-----------------C
Q psy1403 213 RY---NVKLWKTFTECFNCMPVAAIVDEKIFCCHGGLSPDLDSFEDIKRIPRPTD-----VP-----------------D 267 (384)
Q Consensus 213 ~~---~~~~~~~~~~~f~~LPl~a~i~~~il~vHgGisp~~~~l~~i~~i~r~~~-----~~-----------------~ 267 (384)
+| +..+.+.+.++|++||++.+++.++|.||||+| +.+.++-+..|+|... .| +
T Consensus 252 KYk~~~k~Ilr~leevy~WLPi~tiid~~ilvvHGGiS-d~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dE 330 (631)
T KOG0377|consen 252 KYKRHGKRILRFLEEVYRWLPIGTIIDSRILVVHGGIS-DSTDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDE 330 (631)
T ss_pred HhhhcccHHHHHHHHHHHhcchhhhcccceEEEecCcc-cchhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHH
Confidence 99 568999999999999999999999999999998 4566666666665321 11 2
Q ss_pred cchHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEEEeeeeeecCeEEecCCeEEEEeccCCCCCCCC
Q psy1403 268 QGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFD 347 (384)
Q Consensus 268 ~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~ 347 (384)
+..+.|++||||....-+|...-||.|++||+|++.+||++++++++||+|++.++||++.+|++|+|||||+||....+
T Consensus 331 W~Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GS 410 (631)
T KOG0377|consen 331 WQQIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGS 410 (631)
T ss_pred HHHHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecC
Confidence 35678999999998777777778999999999999999999999999999999999999999999999999999998889
Q ss_pred CceEEEEEcCCCceEEEEecC
Q psy1403 348 NAGAMMSVDQNLMCSFQILKP 368 (384)
Q Consensus 348 n~ga~l~i~~~~~~~~~~~~~ 368 (384)
|+||++.+...+...|.++..
T Consensus 411 NrGAYikl~~~~~PhfvQY~a 431 (631)
T KOG0377|consen 411 NRGAYIKLGNQLTPHFVQYQA 431 (631)
T ss_pred CCceEEEeCCCCCchHHHHHh
Confidence 999999999999988888764
No 18
>KOG0376|consensus
Probab=100.00 E-value=2.9e-52 Score=415.95 Aligned_cols=352 Identities=35% Similarity=0.671 Sum_probs=300.8
Q ss_pred cccccCCcccccchhhhhcccccccchhhhhHHHHHHHhhccCCCCCCCc-cc-hhc---------cccccCCChhh-HH
Q psy1403 13 PALSLSPSIMNTKISSILGKRHKSQYCEHHETQQLLIALAHHHVPKLGDN-TI-FNK---------ISKSVSMADPD-LD 80 (384)
Q Consensus 13 ~~~~~~p~~~~~~~~~~~~~~~k~~~c~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~---------~~~~~~~~~~~-~~ 80 (384)
-++++.|++.++ +.|..+|++.+++..|+.++..+....+.. .. .++ ....+ .+..+ -.
T Consensus 97 ~~~~l~Pnd~~~--------~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~~~~~~i~~~y~g~~-le~~kvt~ 167 (476)
T KOG0376|consen 97 KVKKLAPNDPDA--------TRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDEEDMDLIESDYSGPV-LEDHKVTL 167 (476)
T ss_pred HhhhcCcCcHHH--------HHHHHHHHHHHHHHhhhhcccCCccCCccccccccccccccccccccCCcc-cccchhhH
Confidence 467899999999 999999999999999999887665222221 11 111 11110 01101 12
Q ss_pred HHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeeCC----CeeEEecCCCCHHHHHHHHHhCCCCCC-C
Q psy1403 81 LIIQKLLDLRGTRQRRNVRLEEKEIVSLIQISRKIFMSQPMLLELEP----PLKICGDVHGQYTDLLRLFDHGKFPPA-S 155 (384)
Q Consensus 81 ~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~i~~----~i~ViGDIHG~~~~L~~il~~~g~~~~-~ 155 (384)
+++..+.+.. .....++..-+-.|+..++.++..+|++++++. .+.|+||+||++.++.++|+..|.|+. .
T Consensus 168 e~vk~~~~~~----~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~ 243 (476)
T KOG0376|consen 168 EFVKTLMEVF----KNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETN 243 (476)
T ss_pred HHHHHHHHhh----hcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcc
Confidence 2344443221 112246777788899999999999999999864 489999999999999999999998876 4
Q ss_pred ceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHhchHHHHHHHHHHccCCcEEEE
Q psy1403 156 NYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECKRRYNVKLWKTFTECFNCMPVAAIV 235 (384)
Q Consensus 156 ~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~a~i 235 (384)
.|+|.||++|||..|.|++..++..|+.+|+++|++|||||+..+++.|||.+++..+|..+.+..+.+.|..||++.+|
T Consensus 244 ~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~i 323 (476)
T KOG0376|consen 244 PYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHLI 323 (476)
T ss_pred cccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhhh
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCC-CCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceE
Q psy1403 236 DEKIFCCHGGL-SPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLI 314 (384)
Q Consensus 236 ~~~il~vHgGi-sp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~i 314 (384)
+++++.+|||+ +|+-.++++++.|.|+...++.+.++++|||||... .|..+|.||.|..||++++++||+.++++.|
T Consensus 324 ~~~~~~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~-~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i 402 (476)
T KOG0376|consen 324 NNKVLVMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPA-NGRSPSKRGVGLQFGPDVTERFLQDNNLDKI 402 (476)
T ss_pred cCceEEEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccc-cCCCccccCceeeeCCCchhhHHhhcchHHH
Confidence 99999999998 566679999999999999999999999999999864 8999999999999999999999999999999
Q ss_pred EEeeeeeecCeEEecCCeEEEEeccCCCCCCCCCceEEEEEc-CCCceEEEEecCCcccCCCCCC
Q psy1403 315 CRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMSVD-QNLMCSFQILKPTERNRAGPKA 378 (384)
Q Consensus 315 IRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~-~~~~~~~~~~~~~~~~~~~~~~ 378 (384)
||||++.+.||++-++|+|+|||||||||...+|.||++.++ .++...+..|++.+--...|-+
T Consensus 403 ~rshe~~d~gy~~eh~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~~~~ma 467 (476)
T KOG0376|consen 403 IRSHEVKDEGYEVEHSGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPDVKPMA 467 (476)
T ss_pred hhccccCCCceeeecCCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCCCCCcc
Confidence 999999999999999999999999999999999999999999 7888999999988765554443
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=1.2e-35 Score=276.39 Aligned_cols=214 Identities=48% Similarity=0.828 Sum_probs=179.2
Q ss_pred eEEecCCCCHHHHHHHHHhCCCCCCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHH
Q psy1403 130 KICGDVHGQYTDLLRLFDHGKFPPASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDE 209 (384)
Q Consensus 130 ~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e 209 (384)
+|||||||++++|.++++..+..+.+.+|||||+||||+.+.+++.++..++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999988899999999999999999999999999876 8899999999999988776665543
Q ss_pred H---------HHHhchHHHHHHHHHHccCCcEEEEcC-cEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCC
Q psy1403 210 C---------KRRYNVKLWKTFTECFNCMPVAAIVDE-KIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDP 279 (384)
Q Consensus 210 ~---------~~~~~~~~~~~~~~~f~~LPl~a~i~~-~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp 279 (384)
. .......++..+.+++..||+++.++. +++|||||++|.+...++.. ..+......+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 223355678888999999999998887 99999999999977665544 2334456789999999
Q ss_pred CCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEEEeeeeeecCeEEecCCeEEEEeccCCCCCCCCCceEEEE
Q psy1403 280 DNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMS 354 (384)
Q Consensus 280 ~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~ 354 (384)
.........+.++. |+++++.|++.++.+.|||||+++.+|+.....++++||+|++.|++..+|..+++.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 75444444444544 899999999999999999999999999876678899999999999987778777664
No 20
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.94 E-value=7.2e-26 Score=210.33 Aligned_cols=175 Identities=21% Similarity=0.329 Sum_probs=129.8
Q ss_pred eEEecCCCCHHHHHHHHHhCCC--------CCCCceEeecceeccCCCcHHHHHHHHHHHHh---cCCcEEEEcCCCcch
Q psy1403 130 KICGDVHGQYTDLLRLFDHGKF--------PPASNYLFLGDYVDRGKQSLETICLLLAYKIK---HPETFFLLRGNHESA 198 (384)
Q Consensus 130 ~ViGDIHG~~~~L~~il~~~g~--------~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~---~p~~v~lLrGNHE~~ 198 (384)
+||||||||+++|.++|+.+++ .+.+.++|+||+||||+++.+|+++|++|+.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999875 35678999999999999999999999999754 467899999999999
Q ss_pred hhhhhhcchH--HHHHHhc-----hHHH---HHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChhhhcCCCCCCCCCCc
Q psy1403 199 NINRIYGFYD--ECKRRYN-----VKLW---KTFTECFNCMPVAAIVDEKIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQ 268 (384)
Q Consensus 199 ~~~~~~gf~~--e~~~~~~-----~~~~---~~~~~~f~~LPl~a~i~~~il~vHgGisp~~~~l~~i~~i~r~~~~~~~ 268 (384)
.+...+.+.. ....... ..++ ..+.+|++.+|+...++ +++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 9875443321 1111000 1111 34578999999997765 68899999833
Q ss_pred chHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEEEeeeeeecCeEEecCCeEEEEecc
Q psy1403 269 GLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQVVEEGYEFFADKKLVTLFSA 339 (384)
Q Consensus 269 ~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa 339 (384)
+|++.-.....+ .+ -+...+.++++.++.+++|+|||+++.|....+++++++|.+.
T Consensus 140 ------~w~r~y~~~~~~---~~-----~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g 196 (208)
T cd07425 140 ------LWYRGYSKETSD---KE-----CAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVG 196 (208)
T ss_pred ------HHhhHhhhhhhh---cc-----chHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCC
Confidence 343221000000 00 0124678899999999999999999988766889999999873
No 21
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.94 E-value=7.4e-26 Score=215.21 Aligned_cols=122 Identities=23% Similarity=0.428 Sum_probs=97.7
Q ss_pred CCeeEEecCCCCHHHHHHHHHhCCCC---------CCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcc
Q psy1403 127 PPLKICGDVHGQYTDLLRLFDHGKFP---------PASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHES 197 (384)
Q Consensus 127 ~~i~ViGDIHG~~~~L~~il~~~g~~---------~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~ 197 (384)
.+++||||||||++.|.++|+.+++. ..++++||||||||||+|.+|+++++++. .+.++++|+||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 36899999999999999999998874 45789999999999999999999998885 56689999999999
Q ss_pred hhhhhhhcc-------hHHHHHHh-------chHHHHHHHHHHccCCcEEEEc-CcEEEecCCCCCCC
Q psy1403 198 ANINRIYGF-------YDECKRRY-------NVKLWKTFTECFNCMPVAAIVD-EKIFCCHGGLSPDL 250 (384)
Q Consensus 198 ~~~~~~~gf-------~~e~~~~~-------~~~~~~~~~~~f~~LPl~a~i~-~~il~vHgGisp~~ 250 (384)
++++...+- ..+....| ...+.+.+.+||+++|++..++ ++++|||||+.|..
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 887643321 11122222 1346678899999999997764 67999999998863
No 22
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.92 E-value=2.6e-24 Score=207.67 Aligned_cols=218 Identities=18% Similarity=0.301 Sum_probs=142.8
Q ss_pred CeeEEecCCCCHHHHHHHHHhCCCC-CCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcc
Q psy1403 128 PLKICGDVHGQYTDLLRLFDHGKFP-PASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGF 206 (384)
Q Consensus 128 ~i~ViGDIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf 206 (384)
+++||||||||+++|.++|+.+++. ..+.++|+||+|||||+|.+|++++.++ +.++++|+||||.+.+...+|.
T Consensus 2 ~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g~ 77 (275)
T PRK00166 2 ATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAGI 77 (275)
T ss_pred cEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcCC
Confidence 5899999999999999999999875 4578999999999999999999999876 3579999999999988766664
Q ss_pred h-----HHHHHHhchHHHHHHHHHHccCCcEEEE-cCcEEEecCCCCCCCCChhhhcCCCC---CCCCCC-cchHHHhhh
Q psy1403 207 Y-----DECKRRYNVKLWKTFTECFNCMPVAAIV-DEKIFCCHGGLSPDLDSFEDIKRIPR---PTDVPD-QGLLCDLLW 276 (384)
Q Consensus 207 ~-----~e~~~~~~~~~~~~~~~~f~~LPl~a~i-~~~il~vHgGisp~~~~l~~i~~i~r---~~~~~~-~~~~~dlLW 276 (384)
. +.+.........+.+.+|++++|+...+ ++++++||||++|.|...+.+..... ....++ ...+..+.|
T Consensus 78 ~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~~~~~my~ 157 (275)
T PRK00166 78 KRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRDFLANMYG 157 (275)
T ss_pred ccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhcC
Confidence 3 1122222233456688999999998665 66899999999999854443322111 111112 124455555
Q ss_pred cCCCCCCCCCCCCCCCcc-cccChhhHH--HHHHhcC-----------------------------CceEEEeeeeeecC
Q psy1403 277 SDPDNNILDWGDNDRGVS-YTFGPNVVK--TFLDKHH-----------------------------MDLICRAHQVVEEG 324 (384)
Q Consensus 277 sdp~~~~~~~~~~~rG~~-~~fg~~~~~--~fl~~~~-----------------------------l~~iIRgH~~~~~G 324 (384)
+.|. .|.++..|.. ..|.-.++. +||...| -..||-||.....|
T Consensus 158 ~~p~----~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~G 233 (275)
T PRK00166 158 NEPD----RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAALEG 233 (275)
T ss_pred CCcC----ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcccCC
Confidence 5553 5666655532 111111111 1222222 34689999998767
Q ss_pred eEEecCCeEEEEeccCCCCCCCCCceEEEEEcCCC
Q psy1403 325 YEFFADKKLVTLFSAPNYCGEFDNAGAMMSVDQNL 359 (384)
Q Consensus 325 ~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~ 359 (384)
... ...++.+=+..-+ ++.=..|.++...
T Consensus 234 ~~~--~~~~~~LDtGcvw----gg~Lta~~l~~~~ 262 (275)
T PRK00166 234 LTT--PPNIIALDTGCVW----GGKLTALRLEDKQ 262 (275)
T ss_pred ccC--CCCeEEeeccccc----CCeEEEEEeCCCc
Confidence 764 3446666444222 3444567776543
No 23
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.92 E-value=4e-25 Score=211.23 Aligned_cols=157 Identities=23% Similarity=0.375 Sum_probs=113.9
Q ss_pred eeEEecCCCCHHHHHHHHHhCCCC-CCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcch
Q psy1403 129 LKICGDVHGQYTDLLRLFDHGKFP-PASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFY 207 (384)
Q Consensus 129 i~ViGDIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~ 207 (384)
++||||||||+++|+++|+++++. +.+.++|+||+|||||+|+||++++.+++ .++++|+||||.+.+...+|+.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999986 56889999999999999999999999885 4799999999999887666643
Q ss_pred -----HHHHHHhchHHHHHHHHHHccCCcEEEEcC-cEEEecCCCCCCCCChhhhcCCCCC---CCCCCc-chHHHhhhc
Q psy1403 208 -----DECKRRYNVKLWKTFTECFNCMPVAAIVDE-KIFCCHGGLSPDLDSFEDIKRIPRP---TDVPDQ-GLLCDLLWS 277 (384)
Q Consensus 208 -----~e~~~~~~~~~~~~~~~~f~~LPl~a~i~~-~il~vHgGisp~~~~l~~i~~i~r~---~~~~~~-~~~~dlLWs 277 (384)
+.....+.....+.+.+|++++|+...+++ ++++||||++|.|...+........ ...++. ..+..+.|+
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~~~~~~~~a~eve~~l~~~~~~~~~~~my~~ 156 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWSIEQALKLAREVEAALRGPNYREFLKNMYGN 156 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhhCC
Confidence 111122233344678899999999987765 8999999999998543322211111 111222 233444444
Q ss_pred CCCCCCCCCCCCCCCc
Q psy1403 278 DPDNNILDWGDNDRGV 293 (384)
Q Consensus 278 dp~~~~~~~~~~~rG~ 293 (384)
.| ..|.++.+|.
T Consensus 157 ~p----~~W~~~l~g~ 168 (257)
T cd07422 157 EP----DRWSDDLTGI 168 (257)
T ss_pred CC----cccCcccCcc
Confidence 44 3677776664
No 24
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.92 E-value=3.3e-25 Score=212.77 Aligned_cols=195 Identities=19% Similarity=0.265 Sum_probs=134.9
Q ss_pred CeeEEecCCCCHHHHHHHHHhCCCCC-CCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcc
Q psy1403 128 PLKICGDVHGQYTDLLRLFDHGKFPP-ASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGF 206 (384)
Q Consensus 128 ~i~ViGDIHG~~~~L~~il~~~g~~~-~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf 206 (384)
+++||||||||+++|.++|+++++.+ .+.++|+||+|||||+|+||+.++.++. .++++|+||||.+.+...+|+
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g~ 77 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAGI 77 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcCC
Confidence 58999999999999999999999764 5789999999999999999999998774 468899999999999877775
Q ss_pred h-----HHHHHHhchHHHHHHHHHHccCCcEEEEc-CcEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCC
Q psy1403 207 Y-----DECKRRYNVKLWKTFTECFNCMPVAAIVD-EKIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPD 280 (384)
Q Consensus 207 ~-----~e~~~~~~~~~~~~~~~~f~~LPl~a~i~-~~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~ 280 (384)
. +.....+.....+.+.+|++++|+....+ .++++||||++|.|..-+..............+.+.+++.+...
T Consensus 78 ~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~l~~a~~~a~eve~~L~~~~~~~fl~~myg 157 (279)
T TIGR00668 78 SRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYG 157 (279)
T ss_pred CccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCcHHHHHHHHHHHHHHHcCCCHHHHHHHhhC
Confidence 2 33444445566788999999999986554 46999999999999533333222222222222334556666666
Q ss_pred CCCCCCCCCCCCcc-cccChhhHH--HHHHhcC-CceEEEee-eeeecCeE
Q psy1403 281 NNILDWGDNDRGVS-YTFGPNVVK--TFLDKHH-MDLICRAH-QVVEEGYE 326 (384)
Q Consensus 281 ~~~~~~~~~~rG~~-~~fg~~~~~--~fl~~~~-l~~iIRgH-~~~~~G~~ 326 (384)
..+..|.++..|.. ..|--.++. +||...| +++-..+. +-.+.||.
T Consensus 158 n~p~~W~~~l~g~~r~r~i~n~~TRmR~c~~~g~ld~~~k~~~~~~p~~~~ 208 (279)
T TIGR00668 158 DMPNRWSPELQGLARLRFIINAFTRMRFCFPNGQLDMYSKESPEDAPAPLK 208 (279)
T ss_pred CCCccCCCCCchHHHHHHHHHHHhhheeeCCCCCCcccccCCcccCCCCCC
Confidence 55667888877642 222222222 2454444 44444432 12355654
No 25
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.91 E-value=8.3e-24 Score=198.36 Aligned_cols=115 Identities=22% Similarity=0.356 Sum_probs=91.4
Q ss_pred eEEecCCCCHHHHHHHHHhCCCC--------CCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhh
Q psy1403 130 KICGDVHGQYTDLLRLFDHGKFP--------PASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANIN 201 (384)
Q Consensus 130 ~ViGDIHG~~~~L~~il~~~g~~--------~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~ 201 (384)
+||||||||++.|.++|+.+++. +.+.+|||||||||||+|.+|+++|.++. .+.++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~--~~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMV--DAGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhh--cCCCEEEEEccCcHHHHH
Confidence 68999999999999999998875 46789999999999999999999999986 345899999999998875
Q ss_pred hhhcc------h-----------HHHHHHh--chHHHHHHHHHHccCCcEEEEcCcEEEecCCCC
Q psy1403 202 RIYGF------Y-----------DECKRRY--NVKLWKTFTECFNCMPVAAIVDEKIFCCHGGLS 247 (384)
Q Consensus 202 ~~~gf------~-----------~e~~~~~--~~~~~~~~~~~f~~LPl~a~i~~~il~vHgGis 247 (384)
...+- . .+..+.+ ..+.++.+.+||++||+.... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 32210 0 1122222 134567789999999999665 68999999985
No 26
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.91 E-value=1.6e-23 Score=197.64 Aligned_cols=121 Identities=26% Similarity=0.509 Sum_probs=97.5
Q ss_pred CCeeEEecCCCCHHHHHHHHHhCCCCC----------CCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCc
Q psy1403 127 PPLKICGDVHGQYTDLLRLFDHGKFPP----------ASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHE 196 (384)
Q Consensus 127 ~~i~ViGDIHG~~~~L~~il~~~g~~~----------~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE 196 (384)
+||.||||||||+.+|.++|+.+++.+ .++++|||||||||++|.||+++|.+++. +.++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 479999999999999999999998763 35799999999999999999999998864 457999999999
Q ss_pred chhhhhhhc--------chHHHHHHh---chHHHHHHHHHHccCCcEEEEc-CcEEEecCCCCCCC
Q psy1403 197 SANINRIYG--------FYDECKRRY---NVKLWKTFTECFNCMPVAAIVD-EKIFCCHGGLSPDL 250 (384)
Q Consensus 197 ~~~~~~~~g--------f~~e~~~~~---~~~~~~~~~~~f~~LPl~a~i~-~~il~vHgGisp~~ 250 (384)
.+.++...+ +. +....+ ...+.+.+.+||+.||+...++ ++++|||||+++.+
T Consensus 79 ~~l~~~~~~~~~~~~~~~~-~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLE-ETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHHhcCCCccccCccc-chHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 988764322 22 222223 2456778899999999987765 47999999987753
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.88 E-value=1.7e-22 Score=188.85 Aligned_cols=115 Identities=27% Similarity=0.356 Sum_probs=89.1
Q ss_pred CCeeEEecCCCCHHHHHHHHHhCCCC-CCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhc
Q psy1403 127 PPLKICGDVHGQYTDLLRLFDHGKFP-PASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYG 205 (384)
Q Consensus 127 ~~i~ViGDIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~g 205 (384)
++++||||||||+++|+++|+.+++. ..++++||||+|||||+|.+|+++|.. .++++|+||||.++++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHHHHHHC
Confidence 58999999999999999999999886 567899999999999999999999864 25789999999998864322
Q ss_pred chH--------HHHHHh---chHHHHHHHHHHccCCcEEEE---cCcEEEecCCCC
Q psy1403 206 FYD--------ECKRRY---NVKLWKTFTECFNCMPVAAIV---DEKIFCCHGGLS 247 (384)
Q Consensus 206 f~~--------e~~~~~---~~~~~~~~~~~f~~LPl~a~i---~~~il~vHgGis 247 (384)
-.. +....+ ....+..+.+|++.||+...+ ++++++||||++
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 100 000111 123456677899999998655 357999999973
No 28
>PHA02239 putative protein phosphatase
Probab=99.88 E-value=5.1e-22 Score=187.80 Aligned_cols=157 Identities=24% Similarity=0.366 Sum_probs=112.2
Q ss_pred CeeEEecCCCCHHHHHHHHHhCCCC--CCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhc
Q psy1403 128 PLKICGDVHGQYTDLLRLFDHGKFP--PASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYG 205 (384)
Q Consensus 128 ~i~ViGDIHG~~~~L~~il~~~g~~--~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~g 205 (384)
++++||||||+++.|.++++.+... +.+.++|+|||||||++|.+++..++.+.. .+.++++|+||||.+++.....
T Consensus 2 ~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~~ 80 (235)
T PHA02239 2 AIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIMEN 80 (235)
T ss_pred eEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHhC
Confidence 6899999999999999999987543 467899999999999999999999998753 4668999999999987653211
Q ss_pred -----ch---------HHHHHHhc-------------------------------hHHHHHHHHHHccCCcEEEEcCcEE
Q psy1403 206 -----FY---------DECKRRYN-------------------------------VKLWKTFTECFNCMPVAAIVDEKIF 240 (384)
Q Consensus 206 -----f~---------~e~~~~~~-------------------------------~~~~~~~~~~f~~LPl~a~i~~~il 240 (384)
.. .+....|+ ...+..+.+|++.||+... .++++
T Consensus 81 ~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~-~~~~i 159 (235)
T PHA02239 81 VDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYK-EDKYI 159 (235)
T ss_pred chhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEE-ECCEE
Confidence 00 11112221 1133456679999999955 56899
Q ss_pred EecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEEEeeee
Q psy1403 241 CCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQV 320 (384)
Q Consensus 241 ~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~ 320 (384)
|||||+.|... +++ ....+++|.+. . .+.. .-+.||.|||+
T Consensus 160 fVHAGi~p~~~-~~~-------------q~~~~llWiR~-f-----~~~~-------------------~g~~vV~GHTp 200 (235)
T PHA02239 160 FSHSGGVSWKP-VEE-------------QTIDQLIWSRD-F-----QPRK-------------------DGFTYVCGHTP 200 (235)
T ss_pred EEeCCCCCCCC-hhh-------------CCHhHeEEecc-c-----CCCC-------------------CCcEEEECCCC
Confidence 99999988743 211 12378999985 1 1111 11358999999
Q ss_pred eecCe
Q psy1403 321 VEEGY 325 (384)
Q Consensus 321 ~~~G~ 325 (384)
+.++.
T Consensus 201 ~~~~~ 205 (235)
T PHA02239 201 TDSGE 205 (235)
T ss_pred CCCCc
Confidence 87654
No 29
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.87 E-value=8.1e-22 Score=182.65 Aligned_cols=169 Identities=23% Similarity=0.287 Sum_probs=115.0
Q ss_pred CCeeEEecCCCCHHHHHHHHHhCCCC-CCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhc
Q psy1403 127 PPLKICGDVHGQYTDLLRLFDHGKFP-PASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYG 205 (384)
Q Consensus 127 ~~i~ViGDIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~g 205 (384)
++++|+|||||++.+|.++++..++. ..+.++|+||+||||+++.+++.+|.. .++++++||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47999999999999999999998875 467788999999999999999998864 36899999999998876544
Q ss_pred c--hHHHHHHh---------chHHHHHHHHHHccCCcEEEEc---CcEEEecCCCCCCCCChhhhcCCCCCCCCCCcchH
Q psy1403 206 F--YDECKRRY---------NVKLWKTFTECFNCMPVAAIVD---EKIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLL 271 (384)
Q Consensus 206 f--~~e~~~~~---------~~~~~~~~~~~f~~LPl~a~i~---~~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~ 271 (384)
. ..+..... ...+++.+.+||++||+...++ .++++||||+++... ..... + +.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCcccc
Confidence 2 11111111 1225566888999999998764 469999999865431 11100 0 11122334
Q ss_pred HHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEEEeeeeeecCeE
Q psy1403 272 CDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQVVEEGYE 326 (384)
Q Consensus 272 ~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~ 326 (384)
.+++|+++..... . +...-+.+.||.||++.+..+.
T Consensus 149 ~~~~w~~~~~~~~-~------------------~~~~~~~~~iV~GHTh~~~~~~ 184 (207)
T cd07424 149 EELLWSRTRIQKA-Q------------------TQPIKGVDAVVHGHTPVKRPLR 184 (207)
T ss_pred eeeeeccchhhhc-C------------------ccccCCCCEEEECCCCCCcceE
Confidence 5688886642100 0 0001145679999999875443
No 30
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.86 E-value=3.5e-21 Score=185.58 Aligned_cols=148 Identities=24% Similarity=0.357 Sum_probs=107.7
Q ss_pred CeeEEecCCCCHHHHHHHHHhCCCC------CCCceEeecceeccCCCcHHHHHHHHHHHHhcCC-cEEEEcCCCcchhh
Q psy1403 128 PLKICGDVHGQYTDLLRLFDHGKFP------PASNYLFLGDYVDRGKQSLETICLLLAYKIKHPE-TFFLLRGNHESANI 200 (384)
Q Consensus 128 ~i~ViGDIHG~~~~L~~il~~~g~~------~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~-~v~lLrGNHE~~~~ 200 (384)
++++||||||+++.|.++|+.+... ..+.+||||||||||++|.+|+++|.+++..+|. ++++|+||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 6899999999999999999865421 2456999999999999999999999999988876 68999999998876
Q ss_pred hhhhc---------ch------------------------------------------------------HHHHHHhch-
Q psy1403 201 NRIYG---------FY------------------------------------------------------DECKRRYNV- 216 (384)
Q Consensus 201 ~~~~g---------f~------------------------------------------------------~e~~~~~~~- 216 (384)
..... |. .+..+.|+.
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 43211 00 111222321
Q ss_pred --------HHHHHHHHHHccCCcEEEEcCcE-------------EEecCCCCCCCCChhhhcCC-CCCCCCCCcchHHHh
Q psy1403 217 --------KLWKTFTECFNCMPVAAIVDEKI-------------FCCHGGLSPDLDSFEDIKRI-PRPTDVPDQGLLCDL 274 (384)
Q Consensus 217 --------~~~~~~~~~f~~LPl~a~i~~~i-------------l~vHgGisp~~~~l~~i~~i-~r~~~~~~~~~~~dl 274 (384)
.+-+...+|++.||.....+ .+ +|||||+-|...--+|.+.+ .+....|. .++
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~~-~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~----~~~ 237 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEED-DVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPK----IAP 237 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEeC-cccccccccccccceEEEEcccCCCCChHHhhhhhhcccccccc----ccc
Confidence 12244678999999986543 45 99999999998877776653 23333333 388
Q ss_pred hhcCCC
Q psy1403 275 LWSDPD 280 (384)
Q Consensus 275 LWsdp~ 280 (384)
+|.+..
T Consensus 238 l~~R~~ 243 (304)
T cd07421 238 LSGRKN 243 (304)
T ss_pred cccchh
Confidence 888864
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.83 E-value=8.4e-21 Score=177.57 Aligned_cols=115 Identities=23% Similarity=0.315 Sum_probs=86.2
Q ss_pred CCeeEEecCCCCHHHHHHHHHhCCCC-CCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhc
Q psy1403 127 PPLKICGDVHGQYTDLLRLFDHGKFP-PASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYG 205 (384)
Q Consensus 127 ~~i~ViGDIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~g 205 (384)
++++||||||||+++|+++++.+.+. ..+.++|+||+||||++|.+|+++|.+ .++++|+||||.+++.....
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 58999999999999999999998865 457788999999999999999998853 36889999999988864321
Q ss_pred ch-H-------HHHHHhc---hHHHHHHHHHHccCCcEEEEc---CcEEEecCCCC
Q psy1403 206 FY-D-------ECKRRYN---VKLWKTFTECFNCMPVAAIVD---EKIFCCHGGLS 247 (384)
Q Consensus 206 f~-~-------e~~~~~~---~~~~~~~~~~f~~LPl~a~i~---~~il~vHgGis 247 (384)
-. . +....+. ........+|++.||+...+. .++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 00 0 0001111 123344567999999987653 46899999983
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.41 E-value=1.8e-12 Score=110.33 Aligned_cols=158 Identities=22% Similarity=0.272 Sum_probs=102.7
Q ss_pred CeeEEecCCCCHHHH----HHHHHhCCCCCCCceEeecceeccCCCcHHHHHHH--HHHHHhcCCcEEEEcCCCcchhhh
Q psy1403 128 PLKICGDVHGQYTDL----LRLFDHGKFPPASNYLFLGDYVDRGKQSLETICLL--LAYKIKHPETFFLLRGNHESANIN 201 (384)
Q Consensus 128 ~i~ViGDIHG~~~~L----~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll--~~Lk~~~p~~v~lLrGNHE~~~~~ 201 (384)
+|+++||+|+..... ..+.+.....+.+.+|++||++++|..+.+..... .......+..+++++||||.....
T Consensus 2 ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~~ 81 (200)
T PF00149_consen 2 RILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSGN 81 (200)
T ss_dssp EEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHHH
T ss_pred eEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhccccccccccccccceec
Confidence 689999999999987 34444444455677889999999999887776654 455556778899999999998765
Q ss_pred hhhcchHHHHH----------------------------------HhchHHHHHHHHHHccCCcEEEEcCcEEEecCCCC
Q psy1403 202 RIYGFYDECKR----------------------------------RYNVKLWKTFTECFNCMPVAAIVDEKIFCCHGGLS 247 (384)
Q Consensus 202 ~~~gf~~e~~~----------------------------------~~~~~~~~~~~~~f~~LPl~a~i~~~il~vHgGis 247 (384)
..+........ ............+.............++++|.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~ 161 (200)
T PF00149_consen 82 SFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPY 161 (200)
T ss_dssp HHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSS
T ss_pred cccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCCC
Confidence 43322211110 01111112222223333334445668999999987
Q ss_pred CCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEEEeeeee
Q psy1403 248 PDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQVV 321 (384)
Q Consensus 248 p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~ 321 (384)
+........ .....+.+.+..++++.++++++.||+..
T Consensus 162 ~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 162 SSSSDSSSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp TTSSSTHHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred Ccccccccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 653211111 12345677899999999999999999864
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.20 E-value=4.6e-10 Score=98.57 Aligned_cols=83 Identities=22% Similarity=0.320 Sum_probs=63.3
Q ss_pred CeeEEecCCCCHHHHHHHHHhCCCCCCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcch
Q psy1403 128 PLKICGDVHGQYTDLLRLFDHGKFPPASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFY 207 (384)
Q Consensus 128 ~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~ 207 (384)
++.++||+||+...+.++++.... .+.++++||++++++.+. + .....+++++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcCC-------
Confidence 578999999999999999998654 678999999999998665 1 133469999999998532
Q ss_pred HHHHHHhchHHHHHHHHHHccCCcEEEE---cCcEEEecCCCC
Q psy1403 208 DECKRRYNVKLWKTFTECFNCMPVAAIV---DEKIFCCHGGLS 247 (384)
Q Consensus 208 ~e~~~~~~~~~~~~~~~~f~~LPl~a~i---~~~il~vHgGis 247 (384)
+..+|....+ +.+++++||...
T Consensus 62 ------------------~~~~p~~~~~~~~g~~i~v~Hg~~~ 86 (155)
T cd00841 62 ------------------FPILPEEAVLEIGGKRIFLTHGHLY 86 (155)
T ss_pred ------------------cccCCceEEEEECCEEEEEECCccc
Confidence 3556654443 347999999653
No 34
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=99.15 E-value=4.6e-11 Score=101.86 Aligned_cols=145 Identities=39% Similarity=0.650 Sum_probs=121.6
Q ss_pred hhhhhhcchHHHHHHhchH-HHHH---HHHHHccCCcEEEEcC-cEEEecCCCCCCC-CChhhhcCCCCCC--CCCCcch
Q psy1403 199 NINRIYGFYDECKRRYNVK-LWKT---FTECFNCMPVAAIVDE-KIFCCHGGLSPDL-DSFEDIKRIPRPT--DVPDQGL 270 (384)
Q Consensus 199 ~~~~~~gf~~e~~~~~~~~-~~~~---~~~~f~~LPl~a~i~~-~il~vHgGisp~~-~~l~~i~~i~r~~--~~~~~~~ 270 (384)
.++..+|+.+++...+... .|.. ..++|+.+|+.+++++ .++|.|++++|.+ ..+++++.+.|.. ++...+.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ 81 (155)
T COG0639 2 LLTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGH 81 (155)
T ss_pred hhhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCccc
Confidence 3455678888877777654 5666 9999999999999888 9999999999976 6788888777766 7777888
Q ss_pred HHHhhhcCCCCC-CCCCCCCCCCcccccChhhHHHHHHhcCCceEEEeeeeeecCeEEecCCeEEEEeccCCCCC
Q psy1403 271 LCDLLWSDPDNN-ILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQVVEEGYEFFADKKLVTLFSAPNYCG 344 (384)
Q Consensus 271 ~~dlLWsdp~~~-~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~ 344 (384)
..+.+|+++... ...|.++++|.+..+ .+....|+..+..+.+.++|+..+.++.....+..+|.|++++||.
T Consensus 82 ~~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~~ 155 (155)
T COG0639 82 THDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYCY 155 (155)
T ss_pred cccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEecccccC
Confidence 888899998863 688999999998888 7788889988887779999999999998877757999999999974
No 35
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.12 E-value=6.2e-10 Score=96.87 Aligned_cols=122 Identities=20% Similarity=0.326 Sum_probs=79.7
Q ss_pred CeeEEecCCCCHHHHHHHHHhCCCCCCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcch
Q psy1403 128 PLKICGDVHGQYTDLLRLFDHGKFPPASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFY 207 (384)
Q Consensus 128 ~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~ 207 (384)
+|+++||+|++..++.++++.+ ...+.++++||++++ .++++.+... .++.++||||...........
T Consensus 2 ki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~~ 69 (156)
T PF12850_consen 2 KIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDEE 69 (156)
T ss_dssp EEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECTC
T ss_pred EEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhcc
Confidence 6899999999999999999987 346778899999993 6777766444 599999999976543221100
Q ss_pred HHHHHHhchHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCCCCC
Q psy1403 208 DECKRRYNVKLWKTFTECFNCMPVAAIVDEKIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNILDWG 287 (384)
Q Consensus 208 ~e~~~~~~~~~~~~~~~~f~~LPl~a~i~~~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~~~~ 287 (384)
. +....... ....+++++||.....
T Consensus 70 ----------~------~~~~~~~~-~~~~~i~~~H~~~~~~-------------------------------------- 94 (156)
T PF12850_consen 70 ----------Y------LLDALRLT-IDGFKILLSHGHPYDV-------------------------------------- 94 (156)
T ss_dssp ----------S------SHSEEEEE-ETTEEEEEESSTSSSS--------------------------------------
T ss_pred ----------c------cccceeee-ecCCeEEEECCCCccc--------------------------------------
Confidence 0 11111111 2255799999965430
Q ss_pred CCCCCcccccChhhHHHHHHhcCCceEEEeeeeeecC
Q psy1403 288 DNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQVVEEG 324 (384)
Q Consensus 288 ~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G 324 (384)
..+.+.+.+.+...+.++++.||...+.-
T Consensus 95 --------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~ 123 (156)
T PF12850_consen 95 --------QWDPAELREILSRENVDLVLHGHTHRPQV 123 (156)
T ss_dssp --------TTTHHHHHHHHHHTTSSEEEESSSSSEEE
T ss_pred --------ccChhhhhhhhcccCCCEEEcCCcccceE
Confidence 12344566777799999999999997543
No 36
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.08 E-value=1.2e-09 Score=96.79 Aligned_cols=62 Identities=15% Similarity=0.162 Sum_probs=48.3
Q ss_pred CeeEEecCCCCHHHHHHHHHhCCCC-CCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcch
Q psy1403 128 PLKICGDVHGQYTDLLRLFDHGKFP-PASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESA 198 (384)
Q Consensus 128 ~i~ViGDIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~ 198 (384)
++.++||+||++.++..+++..... ..+.++++||++ +.+++..+..+. ..++.++||||..
T Consensus 2 ~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 2 KILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred EEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 6899999999998887776665554 567888999999 467777665442 3599999999983
No 37
>PRK09453 phosphodiesterase; Provisional
Probab=99.00 E-value=1e-09 Score=99.47 Aligned_cols=68 Identities=25% Similarity=0.332 Sum_probs=54.6
Q ss_pred CeeEEecCCCCHHHHHHHHHhCCCCCCCceEeecceeccCCC--------cHHHHHHHHHHHHhcCCcEEEEcCCCcchh
Q psy1403 128 PLKICGDVHGQYTDLLRLFDHGKFPPASNYLFLGDYVDRGKQ--------SLETICLLLAYKIKHPETFFLLRGNHESAN 199 (384)
Q Consensus 128 ~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~--------s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~ 199 (384)
++.++||+||++.++.++++.+...+.+.++++||++|+|+. +.+++..+..+ ...+++++||||...
T Consensus 2 ri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~~ 77 (182)
T PRK09453 2 KLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSEV 77 (182)
T ss_pred eEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcchh
Confidence 689999999999999999988755667889999999999874 45566655433 346999999999753
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.97 E-value=4.1e-09 Score=90.86 Aligned_cols=118 Identities=20% Similarity=0.239 Sum_probs=79.0
Q ss_pred CeeEEecCCCCHHHHHHHHHhCCCCCCCceEeecceeccCCCcH--HHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhc
Q psy1403 128 PLKICGDVHGQYTDLLRLFDHGKFPPASNYLFLGDYVDRGKQSL--ETICLLLAYKIKHPETFFLLRGNHESANINRIYG 205 (384)
Q Consensus 128 ~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~--evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~g 205 (384)
++.++||+||++. .......+.++++||++++|..+. +.+.++..++ .+ .+++++||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCcCC-----
Confidence 4789999999987 122345677889999999886432 2344443332 22 36789999996411
Q ss_pred chHHHHHHhchHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCCC
Q psy1403 206 FYDECKRRYNVKLWKTFTECFNCMPVAAIVDEKIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNILD 285 (384)
Q Consensus 206 f~~e~~~~~~~~~~~~~~~~f~~LPl~a~i~~~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~~ 285 (384)
.-+.+++++||.+.+.. + ..+ .
T Consensus 66 ----------------------------~~~~~ilv~H~~p~~~~---~-------------------~~~--------~ 87 (135)
T cd07379 66 ----------------------------PEDTDILVTHGPPYGHL---D-------------------LVS--------S 87 (135)
T ss_pred ----------------------------CCCCEEEEECCCCCcCc---c-------------------ccc--------c
Confidence 12457999999542210 0 000 0
Q ss_pred CCCCCCCcccccChhhHHHHHHhcCCceEEEeeeeeecCeE
Q psy1403 286 WGDNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQVVEEGYE 326 (384)
Q Consensus 286 ~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~ 326 (384)
....|.+.+.+++++.+.++++.||+..+.|++
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 123567788999999999999999999988876
No 39
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.83 E-value=3.2e-08 Score=81.88 Aligned_cols=118 Identities=25% Similarity=0.336 Sum_probs=85.0
Q ss_pred eEEecCCCCHHHHHHHH--HhCCCCCCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcch
Q psy1403 130 KICGDVHGQYTDLLRLF--DHGKFPPASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFY 207 (384)
Q Consensus 130 ~ViGDIHG~~~~L~~il--~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~ 207 (384)
+++||+|+......... ........+.++++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47899999999988765 33344555778899999999988777655533334456678999999999
Q ss_pred HHHHHHhchHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCCCCC
Q psy1403 208 DECKRRYNVKLWKTFTECFNCMPVAAIVDEKIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNILDWG 287 (384)
Q Consensus 208 ~e~~~~~~~~~~~~~~~~f~~LPl~a~i~~~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~~~~ 287 (384)
++++|+++.+........
T Consensus 70 -------------------------------i~~~H~~~~~~~~~~~~~------------------------------- 87 (131)
T cd00838 70 -------------------------------ILLTHGPPYDPLDELSPD------------------------------- 87 (131)
T ss_pred -------------------------------EEEeccCCCCCchhhccc-------------------------------
Confidence 899999876542100000
Q ss_pred CCCCCcccccChhhHHHHHHhcCCceEEEeeeeeecCeEE
Q psy1403 288 DNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQVVEEGYEF 327 (384)
Q Consensus 288 ~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~ 327 (384)
.......+...+.+.+.+++|.||+.....+..
T Consensus 88 -------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~ 120 (131)
T cd00838 88 -------EDPGSEALLELLEKYGVDLVLSGHTHVYERREP 120 (131)
T ss_pred -------chhhHHHHHHHHHHhCCCEEEeCCeeccccccC
Confidence 000456777888999999999999998766543
No 40
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.82 E-value=2.6e-08 Score=94.43 Aligned_cols=156 Identities=22% Similarity=0.273 Sum_probs=95.7
Q ss_pred CeeEEecCCCCHHHHH-HHHHhCCCCCCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhh---
Q psy1403 128 PLKICGDVHGQYTDLL-RLFDHGKFPPASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRI--- 203 (384)
Q Consensus 128 ~i~ViGDIHG~~~~L~-~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~--- 203 (384)
+|+++|||||++.... +.++.. ..+.++++||+++ .+.+++..|..+ +..++.++||||.+.....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~---~pD~Vl~~GDi~~---~~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLL---QPDLVLFVGDFGN---ESVQLVRAISSL----PLPKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhcc---CCCEEEECCCCCc---ChHHHHHHHHhC----CCCeEEEcCCCcccccccccch
Confidence 5899999999987642 344432 3478889999986 456766666544 3458999999998653200
Q ss_pred ----------hc-----------------------c---------hHHHHHHhc-hHHHHHHHHHHccCCcEEEEcCcEE
Q psy1403 204 ----------YG-----------------------F---------YDECKRRYN-VKLWKTFTECFNCMPVAAIVDEKIF 240 (384)
Q Consensus 204 ----------~g-----------------------f---------~~e~~~~~~-~~~~~~~~~~f~~LPl~a~i~~~il 240 (384)
.| | ..++...|+ ...++.+...++.++.+......+|
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 00 0 024555553 3455666677777764333345799
Q ss_pred EecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHHhcC----CceEEE
Q psy1403 241 CCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHH----MDLICR 316 (384)
Q Consensus 241 ~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~----l~~iIR 316 (384)
+.|++++.... +.+ +|+ ...|.+. +..+|...+.+.++... .++++-
T Consensus 152 iaH~~~~G~g~---~~~--------------------~~c--g~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~f 202 (238)
T cd07397 152 LAHNGPSGLGS---DAE--------------------DPC--GRDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVF 202 (238)
T ss_pred EeCcCCcCCCc---ccc--------------------ccc--ccccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEe
Confidence 99999864421 111 111 1234332 22467766766665544 799999
Q ss_pred eeeeee
Q psy1403 317 AHQVVE 322 (384)
Q Consensus 317 gH~~~~ 322 (384)
||..-.
T Consensus 203 GH~H~~ 208 (238)
T cd07397 203 GHMHHR 208 (238)
T ss_pred CCccCc
Confidence 998854
No 41
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.80 E-value=3.9e-07 Score=85.85 Aligned_cols=71 Identities=11% Similarity=0.169 Sum_probs=57.9
Q ss_pred CCeeEEecCCCCHHHHHHHHHhCCCCCCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcch
Q psy1403 127 PPLKICGDVHGQYTDLLRLFDHGKFPPASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESA 198 (384)
Q Consensus 127 ~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~ 198 (384)
.+|.++||+||++..+.++++.......+.+|++||++++|+..-++..++..+.. .+..++.++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~-l~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGE-AHLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHh-cCCceEEEcCCCChH
Confidence 46899999999999999999876545668899999999999777777666666642 344699999999975
No 42
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.71 E-value=5.3e-07 Score=81.93 Aligned_cols=110 Identities=19% Similarity=0.289 Sum_probs=74.6
Q ss_pred CeeEEecCC-CCHH-----HHHHHHHhCCCCCCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhh
Q psy1403 128 PLKICGDVH-GQYT-----DLLRLFDHGKFPPASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANIN 201 (384)
Q Consensus 128 ~i~ViGDIH-G~~~-----~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~ 201 (384)
.|.|+||.| |.-. .+.++++. .+.+.++.+||+++ .+++.++..+. ..++.++||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~~-- 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDENL-- 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCccc--
Confidence 478999999 5533 35556554 34578889999987 77777775542 25899999999731
Q ss_pred hhhcchHHHHHHhchHHHHHHHHHHccCCcEEEE---cCcEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcC
Q psy1403 202 RIYGFYDECKRRYNVKLWKTFTECFNCMPVAAIV---DEKIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSD 278 (384)
Q Consensus 202 ~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~a~i---~~~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsd 278 (384)
.+|....+ +.+++++||..-.. |
T Consensus 67 --------------------------~lp~~~~~~~~g~~i~l~HG~~~~~--------------------------~-- 92 (178)
T cd07394 67 --------------------------NYPETKVITVGQFKIGLIHGHQVVP--------------------------W-- 92 (178)
T ss_pred --------------------------cCCCcEEEEECCEEEEEEECCcCCC--------------------------C--
Confidence 45554443 34899999942000 0
Q ss_pred CCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEEEeeeeeec
Q psy1403 279 PDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQVVEE 323 (384)
Q Consensus 279 p~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~ 323 (384)
...+.+.++.+..+.+++|.||+..+.
T Consensus 93 ------------------~~~~~~~~~~~~~~~dvii~GHTH~p~ 119 (178)
T cd07394 93 ------------------GDPDSLAALQRQLDVDILISGHTHKFE 119 (178)
T ss_pred ------------------CCHHHHHHHHHhcCCCEEEECCCCcce
Confidence 012345566677889999999999763
No 43
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.67 E-value=2.3e-07 Score=83.12 Aligned_cols=66 Identities=24% Similarity=0.280 Sum_probs=46.6
Q ss_pred eeEEecCCCCHHHHHHHHHhCCCCCCCceEeecceeccCCCc-HHHHHHHHHHHHhcCCcEEEEcCCCcchhh
Q psy1403 129 LKICGDVHGQYTDLLRLFDHGKFPPASNYLFLGDYVDRGKQS-LETICLLLAYKIKHPETFFLLRGNHESANI 200 (384)
Q Consensus 129 i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s-~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~ 200 (384)
|.++||+||++..+.+ ......+.+-+|+.||++++|... .+.+..+. ..+..++.+.||||....
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~----~~~~p~~~v~GNHD~~~~ 67 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLL----AIGVPVLAVPGNCDTPEI 67 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHH----hcCCCEEEEcCCCCCHHH
Confidence 5789999999999877 223334557788999999998753 33333332 234569999999997543
No 44
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.60 E-value=1.7e-07 Score=83.36 Aligned_cols=67 Identities=25% Similarity=0.265 Sum_probs=47.4
Q ss_pred eeEEecCCCCHHHHHHHH-HhCCCCCCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcch
Q psy1403 129 LKICGDVHGQYTDLLRLF-DHGKFPPASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESA 198 (384)
Q Consensus 129 i~ViGDIHG~~~~L~~il-~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~ 198 (384)
+.++||+|++...+...+ +.......+.++++||+++++.....+. ++. ....+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~--~~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLL--ALKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHH--hhcCCccEEEeCCCcceE
Confidence 578999999988776655 2233344567889999999887655543 222 223456799999999986
No 45
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.52 E-value=4.1e-07 Score=86.18 Aligned_cols=211 Identities=17% Similarity=0.208 Sum_probs=105.2
Q ss_pred CCeeEEecCCCC------HHHHHHHHHhCCCCCCCceEeecceecc--C-----CCcHHHHHHHHHHHHhcCCcEEEEcC
Q psy1403 127 PPLKICGDVHGQ------YTDLLRLFDHGKFPPASNYLFLGDYVDR--G-----KQSLETICLLLAYKIKHPETFFLLRG 193 (384)
Q Consensus 127 ~~i~ViGDIHG~------~~~L~~il~~~g~~~~~~~vfLGD~VDR--G-----~~s~evl~ll~~Lk~~~p~~v~lLrG 193 (384)
.++++++|+|.. ...+.+.++.. ....+.++++||++|. | +...+++.+|..++. .+..++++.|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEEeC
Confidence 368999999954 23455555432 1345678899999985 2 224566777766653 3357999999
Q ss_pred CCcchhhhhhhcchHHHHHHhchHHHHHHHHHHccCCcEEEE-cCcEEEecCCCCCCCC-ChhhhcCCCCCCCCCCcchH
Q psy1403 194 NHESANINRIYGFYDECKRRYNVKLWKTFTECFNCMPVAAIV-DEKIFCCHGGLSPDLD-SFEDIKRIPRPTDVPDQGLL 271 (384)
Q Consensus 194 NHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~a~i-~~~il~vHgGisp~~~-~l~~i~~i~r~~~~~~~~~~ 271 (384)
|||..... ...+..+. ..+.. |....+ +.+++++||-.-+.-. ....++.+-|. ..+
T Consensus 79 NHD~~~~~-------~~~~~~g~-------~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~------~~~ 137 (241)
T PRK05340 79 NRDFLLGK-------RFAKAAGM-------TLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRN------PWL 137 (241)
T ss_pred CCchhhhH-------HHHHhCCC-------EEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhC------HHH
Confidence 99974321 11111111 11111 222223 4569999997654221 11112222111 000
Q ss_pred HHhhhcCCCCC----CCCCC-----CCCCCcc--cccChhhHHHHHHhcCCceEEEeeeeeecCeEEecCCeEEEEeccC
Q psy1403 272 CDLLWSDPDNN----ILDWG-----DNDRGVS--YTFGPNVVKTFLDKHHMDLICRAHQVVEEGYEFFADKKLVTLFSAP 340 (384)
Q Consensus 272 ~dlLWsdp~~~----~~~~~-----~~~rG~~--~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~ 340 (384)
.-++=.-|-.. ...+. .+.+... .-..++.+.+.+++.+.+.+|.||+..+.-.....++.-++-.+-+
T Consensus 138 ~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lg 217 (241)
T PRK05340 138 QWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLG 217 (241)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeC
Confidence 00000000000 00000 0000011 1234567888899999999999999986444433333112222222
Q ss_pred CCCCCCCCceEEEEEcCCCceEEEE
Q psy1403 341 NYCGEFDNAGAMMSVDQNLMCSFQI 365 (384)
Q Consensus 341 ~y~~~~~n~ga~l~i~~~~~~~~~~ 365 (384)
+. ...+.++.++++. .+++.
T Consensus 218 dw----~~~~~~~~~~~~~-~~~~~ 237 (241)
T PRK05340 218 DW----HEQGSVLKVDADG-VELIP 237 (241)
T ss_pred CC----CCCCeEEEEECCc-eEEEe
Confidence 22 2347888888764 44443
No 46
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.52 E-value=9.6e-07 Score=75.95 Aligned_cols=107 Identities=17% Similarity=0.161 Sum_probs=74.6
Q ss_pred eEEecCCCCHHHHHHHHHhCCCCCCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHH
Q psy1403 130 KICGDVHGQYTDLLRLFDHGKFPPASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDE 209 (384)
Q Consensus 130 ~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e 209 (384)
.|+||.||..+.+.++... ..+.+.++++||+. .+++..+..++ +..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc-------------
Confidence 3899999998877777664 45667899999974 34555555541 334899999999
Q ss_pred HHHHhchHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCCCCCCC
Q psy1403 210 CKRRYNVKLWKTFTECFNCMPVAAIVDEKIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNILDWGDN 289 (384)
Q Consensus 210 ~~~~~~~~~~~~~~~~f~~LPl~a~i~~~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~~~~~~ 289 (384)
-+++++|+-+.+.. +.+ .
T Consensus 57 ---------------------------~~Ilv~H~pp~~~~-------------------------~~~-----~----- 74 (129)
T cd07403 57 ---------------------------VDILLTHAPPAGIG-------------------------DGE-----D----- 74 (129)
T ss_pred ---------------------------cCEEEECCCCCcCc-------------------------Ccc-----c-----
Confidence 47899998422110 000 0
Q ss_pred CCCcccccChhhHHHHHHhcCCceEEEeeeeeecCeE
Q psy1403 290 DRGVSYTFGPNVVKTFLDKHHMDLICRAHQVVEEGYE 326 (384)
Q Consensus 290 ~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~ 326 (384)
...-|.+.+.+++++.+.++++-||...+..+.
T Consensus 75 ----~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ----FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ----ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 011345678888899999999999999877665
No 47
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.46 E-value=2.3e-06 Score=73.99 Aligned_cols=118 Identities=22% Similarity=0.193 Sum_probs=74.4
Q ss_pred eeEEecCCCCHH------H----HHHHHHhCCCCCCCceEeecceeccCCCc--HHHHHHHHHHHHhcCCcEEEEcCCCc
Q psy1403 129 LKICGDVHGQYT------D----LLRLFDHGKFPPASNYLFLGDYVDRGKQS--LETICLLLAYKIKHPETFFLLRGNHE 196 (384)
Q Consensus 129 i~ViGDIHG~~~------~----L~~il~~~g~~~~~~~vfLGD~VDRG~~s--~evl~ll~~Lk~~~p~~v~lLrGNHE 196 (384)
|+.++|+|=... . |.++++.......+.++++||+++.|... .+...++..+.... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899993211 1 22244444444567788999999988742 12233333333211 37999999999
Q ss_pred chhhhhhhcchHHHHHHhchHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhh
Q psy1403 197 SANINRIYGFYDECKRRYNVKLWKTFTECFNCMPVAAIVDEKIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLW 276 (384)
Q Consensus 197 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~a~i~~~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLW 276 (384)
. ++++|..+.+...
T Consensus 80 ~-----------------------------------------iv~~Hhp~~~~~~------------------------- 93 (144)
T cd07400 80 V-----------------------------------------IVVLHHPLVPPPG------------------------- 93 (144)
T ss_pred E-----------------------------------------EEEecCCCCCCCc-------------------------
Confidence 8 8889986543210
Q ss_pred cCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEEEeeeeeecCeEE
Q psy1403 277 SDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQVVEEGYEF 327 (384)
Q Consensus 277 sdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~ 327 (384)
.+.... . +.+.+.+++++.++++++.||...+..+.+
T Consensus 94 --------~~~~~~-----~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 94 --------SGRERL-----L-DAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred --------cccccC-----C-CHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 000000 1 456788899999999999999998765553
No 48
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.40 E-value=1.7e-06 Score=81.59 Aligned_cols=205 Identities=13% Similarity=0.153 Sum_probs=100.1
Q ss_pred eeEEecCCCCH------HHHHHHHHhCCCCCCCceEeecceeccC--C---C--cHHHHHHHHHHHHhcCCcEEEEcCCC
Q psy1403 129 LKICGDVHGQY------TDLLRLFDHGKFPPASNYLFLGDYVDRG--K---Q--SLETICLLLAYKIKHPETFFLLRGNH 195 (384)
Q Consensus 129 i~ViGDIHG~~------~~L~~il~~~g~~~~~~~vfLGD~VDRG--~---~--s~evl~ll~~Lk~~~p~~v~lLrGNH 195 (384)
+++++|+|... ..+.+.+..... ..+.++++||++|.. . . ..++...+..|+. .+..++.+.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 36899999543 234455544322 457788999999952 1 1 1345555655543 345799999999
Q ss_pred cchhhhhhhcchHHHHHHhchHHHHHHHHHHccCCcEE-EEcCcEEEecCCCCCCC-CChhhhcCCCCCC-------CCC
Q psy1403 196 ESANINRIYGFYDECKRRYNVKLWKTFTECFNCMPVAA-IVDEKIFCCHGGLSPDL-DSFEDIKRIPRPT-------DVP 266 (384)
Q Consensus 196 E~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~a-~i~~~il~vHgGisp~~-~~l~~i~~i~r~~-------~~~ 266 (384)
|...-. ...+..+. .++.. |... +-+.+++++||-.-..- ......+..-|.. ..|
T Consensus 79 D~~~~~-------~~~~~~gi-------~~l~~-~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l~ 143 (231)
T TIGR01854 79 DFLIGK-------RFAREAGM-------TLLPD-PSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHLP 143 (231)
T ss_pred chhhhH-------HHHHHCCC-------EEECC-CEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhCC
Confidence 974211 00000000 11111 1111 22567999999643210 1111112111110 000
Q ss_pred C--cchHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEEEeeeeeecCeEEecCCeEEEEeccCCCCC
Q psy1403 267 D--QGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQVVEEGYEFFADKKLVTLFSAPNYCG 344 (384)
Q Consensus 267 ~--~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~ 344 (384)
. ...+...+++..... ... .+ ..-....+..+.+.++..+.+++|.||+..+.-..+..++.-.+-++-++.
T Consensus 144 ~~~r~~l~~~~~~~s~~~-~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW-- 217 (231)
T TIGR01854 144 LAVRVKLARKIRAESRAD-KQM--KS-QDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDW-- 217 (231)
T ss_pred HHHHHHHHHHHHHHHHHh-cCC--Cc-chhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCC--
Confidence 0 111223333321100 000 00 011223466788888999999999999998654443333322233333333
Q ss_pred CCCCceEEEEEcCC
Q psy1403 345 EFDNAGAMMSVDQN 358 (384)
Q Consensus 345 ~~~n~ga~l~i~~~ 358 (384)
...+.++.++++
T Consensus 218 --~~~~~~~~~~~~ 229 (231)
T TIGR01854 218 --YRQGSILRVDAD 229 (231)
T ss_pred --ccCCeEEEEcCC
Confidence 234666777665
No 49
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.37 E-value=1.6e-05 Score=74.09 Aligned_cols=193 Identities=17% Similarity=0.144 Sum_probs=98.2
Q ss_pred CeeEEecCCCC----HHHH----HHHHHhCCCCCCCceEeecceeccCCCcHHH---HHHHHHHHHhcCCcEEEEcCCCc
Q psy1403 128 PLKICGDVHGQ----YTDL----LRLFDHGKFPPASNYLFLGDYVDRGKQSLET---ICLLLAYKIKHPETFFLLRGNHE 196 (384)
Q Consensus 128 ~i~ViGDIHG~----~~~L----~~il~~~g~~~~~~~vfLGD~VDRG~~s~ev---l~ll~~Lk~~~p~~v~lLrGNHE 196 (384)
+++++||+|-- ...+ ..+.+...-...+-++++||++|.|....+- ...+..|. ..+-.++.++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~-~~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLD-KAGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHH-HcCCcEEEECCCCc
Confidence 47899999952 2223 3334443333456788999999998843322 22222222 12345899999999
Q ss_pred chhhhhhhcchHHHHHHhchHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhh
Q psy1403 197 SANINRIYGFYDECKRRYNVKLWKTFTECFNCMPVAAIVDEKIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLW 276 (384)
Q Consensus 197 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~a~i~~~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLW 276 (384)
.... -.+.. ..+-++-+.+.++.-|- ..-++++|--+.+... |
T Consensus 81 ~~~~-ld~~~--------~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~------------------------~ 123 (214)
T cd07399 81 LVLA-LEFGP--------RDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDS------------------------R 123 (214)
T ss_pred chhh-CCCCC--------CHHHHHHHHHHHHHCCC----CCEEEEecccccCCCC------------------------c
Confidence 4321 11111 11222223344443221 1247788885432210 0
Q ss_pred cCCCCCCCCCCCCCCCcccccChhhHHHHHHhc-CCceEEEeeeeeecCeEEe-----cCCeEEEEeccCCCCCCCCCce
Q psy1403 277 SDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKH-HMDLICRAHQVVEEGYEFF-----ADKKLVTLFSAPNYCGEFDNAG 350 (384)
Q Consensus 277 sdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~-~l~~iIRgH~~~~~G~~~~-----~~~~~iTvfSa~~y~~~~~n~g 350 (384)
.+ ....|. ...-+...+.+.++++ ++++++-||.... +.... .++.+..+.+....-...+|..
T Consensus 124 ~~---~~~~~~------~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~ 193 (214)
T cd07399 124 PD---SIDYDS------DVNDGQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEPNGGNGF 193 (214)
T ss_pred Cc---cccccc------ccccHHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCCCCCcce
Confidence 00 001110 1123445677888888 7999999998864 33322 1334555544321111112211
Q ss_pred -EEEEEcCC-CceEEEEecC
Q psy1403 351 -AMMSVDQN-LMCSFQILKP 368 (384)
Q Consensus 351 -a~l~i~~~-~~~~~~~~~~ 368 (384)
.++.++++ ..+.++.|.|
T Consensus 194 ~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 194 LRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred EEEEEEecCCCEEEEEeCCC
Confidence 45666766 4677777766
No 50
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.29 E-value=6.1e-06 Score=78.01 Aligned_cols=68 Identities=21% Similarity=0.136 Sum_probs=48.3
Q ss_pred CeeEEecCCCCH------HHHHHHHHhCCCCCCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcch
Q psy1403 128 PLKICGDVHGQY------TDLLRLFDHGKFPPASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESA 198 (384)
Q Consensus 128 ~i~ViGDIHG~~------~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~ 198 (384)
+|.+++|+|+++ ..|.++++.+.-...+-+|+.||++++++.+.+++..+..+ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 478999999753 22556666554445677889999999876666655555442 345699999999964
No 51
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.21 E-value=5e-05 Score=68.76 Aligned_cols=158 Identities=16% Similarity=0.166 Sum_probs=96.1
Q ss_pred CCeeEEecCCCCHHHHHHHHHhCCCCCCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcc
Q psy1403 127 PPLKICGDVHGQYTDLLRLFDHGKFPPASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGF 206 (384)
Q Consensus 127 ~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf 206 (384)
.+|.|+||.||...+..+..+.......+.++.+||++..... ..+-. ....+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~-----~~l~~---~~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTL-----DALEG---GLAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccch-----HHhhc---ccccceEEEEccCCCcccc-----
Confidence 4689999999999766666666666667788899999985541 11111 0245799999999986432
Q ss_pred hHHHHHHhchHHHHHHHHHHccCCcEE--EE-cCcEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCC
Q psy1403 207 YDECKRRYNVKLWKTFTECFNCMPVAA--IV-DEKIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNI 283 (384)
Q Consensus 207 ~~e~~~~~~~~~~~~~~~~f~~LPl~a--~i-~~~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~ 283 (384)
..+|-.. .+ +-+++++||.....
T Consensus 69 --------------------~~~p~~~~~~~~g~ki~l~HGh~~~~---------------------------------- 94 (172)
T COG0622 69 --------------------EELPEELVLEVGGVKIFLTHGHLYFV---------------------------------- 94 (172)
T ss_pred --------------------ccCChhHeEEECCEEEEEECCCcccc----------------------------------
Confidence 2223222 22 45899999965321
Q ss_pred CCCCCCCCCcccccChhhHHHHHHhcCCceEEEeeeeeecCeEEecCCeEEEEeccCCCCCCCC--CceEEEEEcCC-Cc
Q psy1403 284 LDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFD--NAGAMMSVDQN-LM 360 (384)
Q Consensus 284 ~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~--n~ga~l~i~~~-~~ 360 (384)
......+..+-+..+.+.+|.||+..+.=++ . ++ + ++-.|.-+.... +..+++.++.+ .+
T Consensus 95 ------------~~~~~~l~~la~~~~~Dvli~GHTH~p~~~~-~-~~-i--~~vNPGS~s~pr~~~~~sy~il~~~~~~ 157 (172)
T COG0622 95 ------------KTDLSLLEYLAKELGADVLIFGHTHKPVAEK-V-GG-I--LLVNPGSVSGPRGGNPASYAILDVDNLE 157 (172)
T ss_pred ------------ccCHHHHHHHHHhcCCCEEEECCCCcccEEE-E-CC-E--EEEcCCCcCCCCCCCCcEEEEEEcCCCE
Confidence 0123456667778889999999999863322 2 22 2 233443332222 34345555444 45
Q ss_pred eEEEEecC
Q psy1403 361 CSFQILKP 368 (384)
Q Consensus 361 ~~~~~~~~ 368 (384)
.....+..
T Consensus 158 ~~~~~~~~ 165 (172)
T COG0622 158 VEVLFLER 165 (172)
T ss_pred EEEEEeec
Confidence 55555544
No 52
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.18 E-value=8.1e-06 Score=78.88 Aligned_cols=70 Identities=19% Similarity=0.084 Sum_probs=50.6
Q ss_pred CCeeEEecCCCC----HHHHHHHHHhCCCCCCCceEeecceeccC--CCcHHHHHHHHHHHHhcCCcEEEEcCCCcch
Q psy1403 127 PPLKICGDVHGQ----YTDLLRLFDHGKFPPASNYLFLGDYVDRG--KQSLETICLLLAYKIKHPETFFLLRGNHESA 198 (384)
Q Consensus 127 ~~i~ViGDIHG~----~~~L~~il~~~g~~~~~~~vfLGD~VDRG--~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~ 198 (384)
-+|++++|+|.. ...+.++++...-...+-+++.||++|++ ....++...|..|+.. ..++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~--~pv~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAEC--APTFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhc--CCEEEecCCCCcc
Confidence 469999999976 55577777765545567788999999954 2333455666666643 3599999999974
No 53
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.12 E-value=6.9e-05 Score=72.33 Aligned_cols=70 Identities=13% Similarity=0.057 Sum_probs=47.3
Q ss_pred CCeeEEecCC-C-----------CHHHHHHHHHhCC-C-CCCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEc
Q psy1403 127 PPLKICGDVH-G-----------QYTDLLRLFDHGK-F-PPASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLR 192 (384)
Q Consensus 127 ~~i~ViGDIH-G-----------~~~~L~~il~~~g-~-~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLr 192 (384)
-+++.++|+| . ....|.++++.+. . +..+-+|+.||+++.|. .+-+..+...-...+..++.+.
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v~ 92 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWLP 92 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEeC
Confidence 4689999999 1 2456777777653 2 23466889999999874 3333333332233456799999
Q ss_pred CCCcch
Q psy1403 193 GNHESA 198 (384)
Q Consensus 193 GNHE~~ 198 (384)
||||..
T Consensus 93 GNHD~~ 98 (275)
T PRK11148 93 GNHDFQ 98 (275)
T ss_pred CCCCCh
Confidence 999974
No 54
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=98.11 E-value=6.7e-06 Score=67.25 Aligned_cols=83 Identities=12% Similarity=0.196 Sum_probs=54.7
Q ss_pred cccchhhhhHHHHHHHhhccC--CCCCCC---------ccchhccccc-cCCChhhHHHHHHHHHhccCCCCCccccCCH
Q psy1403 35 KSQYCEHHETQQLLIALAHHH--VPKLGD---------NTIFNKISKS-VSMADPDLDLIIQKLLDLRGTRQRRNVRLEE 102 (384)
Q Consensus 35 k~~~c~~~~~~~~~~~~~~~~--~~~~~~---------~~~~~~~~~~-~~~~~~~~~~~i~~l~~~~~~~~~~~~~l~~ 102 (384)
|+++|+|.+++..|+.+++.+ .++..+ ...|++.+.. ..++...+.++++.+...+ .|+.
T Consensus 1 Kl~ec~k~ir~~~FekAI~~d~~~~s~~e~~d~~~i~Ve~sY~GP~l~~~~it~efv~~mie~FK~~K--------~Lhk 72 (95)
T PF08321_consen 1 KLKECEKLIRRIAFEKAIAVDEEKKSVSESIDLESIDVEDSYDGPRLEDEPITLEFVKAMIEWFKNQK--------KLHK 72 (95)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHHHHHSTTTS-TTSTT---SS--SS--BTTB--HHHHHHHHHHHHCT------------H
T ss_pred CHHHHHHHHHHHHHHHHhccCCcccCHHHhcCccceecCCCCCCCCCCCCCCCHHHHHHHHHHHHhCC--------CccH
Confidence 688999999999999988772 122222 1244444432 4456667777887776554 6899
Q ss_pred HHHHHHHHHHHHHHhhCCCeeee
Q psy1403 103 KEIVSLIQISRKIFMSQPMLLEL 125 (384)
Q Consensus 103 ~~i~~l~~~a~~il~~ep~ll~i 125 (384)
..+..|+.++.++|+++|+++++
T Consensus 73 kyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 73 KYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp HHHHHHHHHHHHHHHTS-SEEEE
T ss_pred HHHHHHHHHHHHHHHhCcCccCC
Confidence 99999999999999999999985
No 55
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.01 E-value=0.00016 Score=69.09 Aligned_cols=71 Identities=13% Similarity=0.033 Sum_probs=43.0
Q ss_pred CeeEEecCCCCH----------------HHHHHHHHhCCC--CCCCceEeecceeccCCCcH---HHHHHHHH-HHHh-c
Q psy1403 128 PLKICGDVHGQY----------------TDLLRLFDHGKF--PPASNYLFLGDYVDRGKQSL---ETICLLLA-YKIK-H 184 (384)
Q Consensus 128 ~i~ViGDIHG~~----------------~~L~~il~~~g~--~~~~~~vfLGD~VDRG~~s~---evl~ll~~-Lk~~-~ 184 (384)
+++++||+|-.. ..|.++++.+.- +..+-++++||+++.|...- +....+.. ++.. .
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 467888888663 234556665432 24456779999999887541 11222222 2211 2
Q ss_pred CCcEEEEcCCCcch
Q psy1403 185 PETFFLLRGNHESA 198 (384)
Q Consensus 185 p~~v~lLrGNHE~~ 198 (384)
+-.++.++||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 34699999999974
No 56
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=97.96 E-value=1.1e-05 Score=74.76 Aligned_cols=71 Identities=24% Similarity=0.231 Sum_probs=51.8
Q ss_pred CCeeEEecCCCCHH----HHHHHHHhCCCCCCCceEeecceeccCCCcH-HHHHHHHHHHHhcCCcEEEEcCCCcchh
Q psy1403 127 PPLKICGDVHGQYT----DLLRLFDHGKFPPASNYLFLGDYVDRGKQSL-ETICLLLAYKIKHPETFFLLRGNHESAN 199 (384)
Q Consensus 127 ~~i~ViGDIHG~~~----~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~-evl~ll~~Lk~~~p~~v~lLrGNHE~~~ 199 (384)
.++++++|+|+... .+.++++.+.-...+-+++.||++|.+.... ++..++..+. .+..++.+.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCccccc
Confidence 36899999998744 5677776655445567889999999987764 4555554443 3456999999999853
No 57
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.94 E-value=9.3e-05 Score=69.82 Aligned_cols=47 Identities=6% Similarity=-0.036 Sum_probs=33.2
Q ss_pred ChhhHHHHHHhcCCceEEEeeeeeecCeE---EecCCeEEEEeccCCCCCCC
Q psy1403 298 GPNVVKTFLDKHHMDLICRAHQVVEEGYE---FFADKKLVTLFSAPNYCGEF 346 (384)
Q Consensus 298 g~~~~~~fl~~~~l~~iIRgH~~~~~G~~---~~~~~~~iTvfSa~~y~~~~ 346 (384)
+...+.+.+++.++++++.||.....-.. ...+| |+.+++|+-|.++
T Consensus 181 ~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~g--i~~~~~~~~~~~~ 230 (232)
T cd07393 181 DDSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGG--IRYQLVSADYLNF 230 (232)
T ss_pred CHHHHHHHHHHcCCCEEEECCCCCCcccccccceECC--EEEEEEcchhcCc
Confidence 44567788888999999999999754333 12344 6778888777654
No 58
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=97.84 E-value=0.0003 Score=64.42 Aligned_cols=69 Identities=12% Similarity=0.106 Sum_probs=43.4
Q ss_pred CeeEEecCCCCHH-----------HHHHHHH-hCCCCCCCceEeecceeccCCCc---HHHHHHHHHHHHhcCCcEEEEc
Q psy1403 128 PLKICGDVHGQYT-----------DLLRLFD-HGKFPPASNYLFLGDYVDRGKQS---LETICLLLAYKIKHPETFFLLR 192 (384)
Q Consensus 128 ~i~ViGDIHG~~~-----------~L~~il~-~~g~~~~~~~vfLGD~VDRG~~s---~evl~ll~~Lk~~~p~~v~lLr 192 (384)
++.+++|+|-... ...+.++ .+.....+.+|++||+++.+... .+.+..++.......-.++++.
T Consensus 4 ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~ 83 (199)
T cd07383 4 KILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAATF 83 (199)
T ss_pred EEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEEC
Confidence 5889999996322 1112222 22223456788999999976653 4555555443333445689999
Q ss_pred CCCc
Q psy1403 193 GNHE 196 (384)
Q Consensus 193 GNHE 196 (384)
||||
T Consensus 84 GNHD 87 (199)
T cd07383 84 GNHD 87 (199)
T ss_pred ccCC
Confidence 9999
No 59
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.75 E-value=0.00014 Score=68.51 Aligned_cols=201 Identities=15% Similarity=0.232 Sum_probs=104.3
Q ss_pred eEEecCCCC------HHHHHHHHHhCCCCCCCceEeecceec--cCCC-----cHHHHHHHHHHHHhcCCcEEEEcCCCc
Q psy1403 130 KICGDVHGQ------YTDLLRLFDHGKFPPASNYLFLGDYVD--RGKQ-----SLETICLLLAYKIKHPETFFLLRGNHE 196 (384)
Q Consensus 130 ~ViGDIHG~------~~~L~~il~~~g~~~~~~~vfLGD~VD--RG~~-----s~evl~ll~~Lk~~~p~~v~lLrGNHE 196 (384)
++|+|+|=. -+.|.+.++... +..+.+.+|||++| .|.+ -.+|...|..+. +.+.+++.+.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a-~~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLA-RKGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHH-hcCCeEEEecCchH
Confidence 368999854 233455555433 35577889999998 2333 234444444433 45678999999999
Q ss_pred chhhhhhhcchHHHHHHhchHHHHHHHHHHccCCcEEEE---cCcEEEecCCCCCC-CCChhhhcCCCCC-------CCC
Q psy1403 197 SANINRIYGFYDECKRRYNVKLWKTFTECFNCMPVAAIV---DEKIFCCHGGLSPD-LDSFEDIKRIPRP-------TDV 265 (384)
Q Consensus 197 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~a~i---~~~il~vHgGisp~-~~~l~~i~~i~r~-------~~~ 265 (384)
.. +...++ .. .--+.-+|-..++ +.+++.+||-.--. ...-..++...+. ...
T Consensus 79 fl-l~~~f~------~~---------~g~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lflnl 142 (237)
T COG2908 79 FL-LGKRFA------QE---------AGGMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLNL 142 (237)
T ss_pred HH-HHHHHH------hh---------cCceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHHh
Confidence 43 322110 00 0012233433332 67899999964211 0000001100000 000
Q ss_pred CCc--chHHHhhhcCCCCCCCCCCCCCCCccc---ccChhhHHHHHHhcCCceEEEeeeeeecCeEEecCCeEEEEeccC
Q psy1403 266 PDQ--GLLCDLLWSDPDNNILDWGDNDRGVSY---TFGPNVVKTFLDKHHMDLICRAHQVVEEGYEFFADKKLVTLFSAP 340 (384)
Q Consensus 266 ~~~--~~~~dlLWsdp~~~~~~~~~~~rG~~~---~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~ 340 (384)
+-. .-+..-+|+.- .|.+....... ...+.++.+-++++|++.+|.||+..+..-....-..+.
T Consensus 143 ~l~~R~ri~~k~r~~s-----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~yi~------ 211 (237)
T COG2908 143 PLRVRRRIAYKIRSLS-----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGITYIN------ 211 (237)
T ss_pred HHHHHHHHHHHHHHhh-----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCCceEEe------
Confidence 000 01122244442 23333222122 234667778899999999999999987665543211111
Q ss_pred CCCCCCCCceEEEEEcCCCce
Q psy1403 341 NYCGEFDNAGAMMSVDQNLMC 361 (384)
Q Consensus 341 ~y~~~~~n~ga~l~i~~~~~~ 361 (384)
||.-...|++++++.+...
T Consensus 212 --lGdW~~~~s~~~v~~~~~~ 230 (237)
T COG2908 212 --LGDWVSEGSILEVDDGGLE 230 (237)
T ss_pred --cCcchhcceEEEEecCcEE
Confidence 3444467899999887544
No 60
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.72 E-value=8.3e-05 Score=71.51 Aligned_cols=73 Identities=19% Similarity=0.200 Sum_probs=49.6
Q ss_pred CeeEEecCC-CC------------HHHHHHHHHhCCCCCCCceEeecceeccCCC-cHHHHHHHHHHHHhcCCcEEEEcC
Q psy1403 128 PLKICGDVH-GQ------------YTDLLRLFDHGKFPPASNYLFLGDYVDRGKQ-SLETICLLLAYKIKHPETFFLLRG 193 (384)
Q Consensus 128 ~i~ViGDIH-G~------------~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~-s~evl~ll~~Lk~~~p~~v~lLrG 193 (384)
+++++||+| +. ...|.++++.+.....+-+|++||+++.|.. +.+-+..+...-...+-.++.+.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 588999999 21 4556677766654446678899999998863 334444444333334457999999
Q ss_pred CCcchhh
Q psy1403 194 NHESANI 200 (384)
Q Consensus 194 NHE~~~~ 200 (384)
|||....
T Consensus 82 NHD~~~~ 88 (267)
T cd07396 82 NHDLYNP 88 (267)
T ss_pred ccccccc
Confidence 9998644
No 61
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.70 E-value=0.00022 Score=75.02 Aligned_cols=72 Identities=19% Similarity=0.218 Sum_probs=43.7
Q ss_pred CCeeEEecCC-CCH----HHHHHHHHhCC-C--------CCCCceEeecceecc-CCCc---------------HHHHHH
Q psy1403 127 PPLKICGDVH-GQY----TDLLRLFDHGK-F--------PPASNYLFLGDYVDR-GKQS---------------LETICL 176 (384)
Q Consensus 127 ~~i~ViGDIH-G~~----~~L~~il~~~g-~--------~~~~~~vfLGD~VDR-G~~s---------------~evl~l 176 (384)
..+++++|+| |.. ..+..+++.+. . ...+.+|++||++|. |..+ .++..+
T Consensus 244 ~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~ 323 (504)
T PRK04036 244 VYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEY 323 (504)
T ss_pred cEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHH
Confidence 4589999999 653 23444444322 2 223578899999994 3221 133444
Q ss_pred HHHHHHhcCCcEEEEcCCCcchhh
Q psy1403 177 LLAYKIKHPETFFLLRGNHESANI 200 (384)
Q Consensus 177 l~~Lk~~~p~~v~lLrGNHE~~~~ 200 (384)
|..+. ..-.+++++||||....
T Consensus 324 L~~L~--~~i~V~~ipGNHD~~~~ 345 (504)
T PRK04036 324 LKQIP--EDIKIIISPGNHDAVRQ 345 (504)
T ss_pred HHhhh--cCCeEEEecCCCcchhh
Confidence 44443 33469999999998643
No 62
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.53 E-value=0.00017 Score=69.02 Aligned_cols=71 Identities=23% Similarity=0.277 Sum_probs=47.8
Q ss_pred CeeEEecCCC-C-----------HHHHHHHHHhCCCCCCCceEeecceeccCCCcHHHH----HHHHHHHHhcCCcEEEE
Q psy1403 128 PLKICGDVHG-Q-----------YTDLLRLFDHGKFPPASNYLFLGDYVDRGKQSLETI----CLLLAYKIKHPETFFLL 191 (384)
Q Consensus 128 ~i~ViGDIHG-~-----------~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl----~ll~~Lk~~~p~~v~lL 191 (384)
+++.++|+|- . ...|.++++.+.-...+.+++.||++|+...+.+.. .++..|+...|-.++++
T Consensus 2 kilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~i 81 (253)
T TIGR00619 2 RILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVVI 81 (253)
T ss_pred EEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 6889999993 2 234555655544445677889999999886655443 33444443233579999
Q ss_pred cCCCcch
Q psy1403 192 RGNHESA 198 (384)
Q Consensus 192 rGNHE~~ 198 (384)
.||||..
T Consensus 82 ~GNHD~~ 88 (253)
T TIGR00619 82 SGNHDSA 88 (253)
T ss_pred ccCCCCh
Confidence 9999985
No 63
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.49 E-value=0.018 Score=54.00 Aligned_cols=204 Identities=17% Similarity=0.224 Sum_probs=113.9
Q ss_pred CCeeEEecCCCCHHHHHHHHHhCCCCCCCceEeeccee--ccCCCcHHHHHH--HHHHHHhcCCcEEEEcCCCcchhhhh
Q psy1403 127 PPLKICGDVHGQYTDLLRLFDHGKFPPASNYLFLGDYV--DRGKQSLETICL--LLAYKIKHPETFFLLRGNHESANINR 202 (384)
Q Consensus 127 ~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~V--DRG~~s~evl~l--l~~Lk~~~p~~v~lLrGNHE~~~~~~ 202 (384)
.++..+.|+||.++.+.++++...-...+-+++.||+. +.|+.-.. ... +..++ .....++.++||-|...+-.
T Consensus 4 mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~-~~~~~~e~l~-~~~~~v~avpGNcD~~~v~~ 81 (226)
T COG2129 4 MKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVA-EELNKLEALK-ELGIPVLAVPGNCDPPEVID 81 (226)
T ss_pred ceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHH-HhhhHHHHHH-hcCCeEEEEcCCCChHHHHH
Confidence 57899999999999999999887766677788999999 88874322 222 33343 24567999999988875532
Q ss_pred hhcchHHHHHHhchHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCC-CCC-----hhhhcCCCCCCCCCCcchHHHhhh
Q psy1403 203 IYGFYDECKRRYNVKLWKTFTECFNCMPVAAIVDEKIFCCHGGLSPD-LDS-----FEDIKRIPRPTDVPDQGLLCDLLW 276 (384)
Q Consensus 203 ~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~a~i~~~il~vHgGisp~-~~~-----l~~i~~i~r~~~~~~~~~~~dlLW 276 (384)
. ...++..+.. -...+++--+|-=||..|. +.+ .++|....+..-........=++.
T Consensus 82 ~-------l~~~~~~v~~----------~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~~~Il~~ 144 (226)
T COG2129 82 V-------LKNAGVNVHG----------RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNPVNILLT 144 (226)
T ss_pred H-------HHhccccccc----------ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCcceEEEe
Confidence 1 1111111111 1112333334444666543 211 222211100000000000000011
Q ss_pred cCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEEEeeeeeecCeEEecCCeEEEEeccCCCCCCCCCceEEEEEc
Q psy1403 277 SDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMSVD 356 (384)
Q Consensus 277 sdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~ 356 (384)
--|.-. .....+-| -.--|..+++++.++.+-.+.+.||=....|...-.+ ||+-.|.--+ .-..|++.++
T Consensus 145 HaPP~g--t~~d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~----TivVNPG~~~--~g~yA~i~l~ 215 (226)
T COG2129 145 HAPPYG--TLLDTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN----TIVVNPGPLG--EGRYALIELE 215 (226)
T ss_pred cCCCCC--ccccCCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC----eEEECCCCcc--CceEEEEEec
Confidence 111100 00111222 1346899999999999999999999887778765432 5666665422 3567888887
Q ss_pred CC
Q psy1403 357 QN 358 (384)
Q Consensus 357 ~~ 358 (384)
+.
T Consensus 216 ~~ 217 (226)
T COG2129 216 KE 217 (226)
T ss_pred Cc
Confidence 76
No 64
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.49 E-value=0.0003 Score=63.23 Aligned_cols=57 Identities=19% Similarity=0.158 Sum_probs=34.0
Q ss_pred HHHHHHhCCCCCCCceEeecceeccCCCcH-HHHHHH-HHHHHhcCCcEEEEcCCCcch
Q psy1403 142 LLRLFDHGKFPPASNYLFLGDYVDRGKQSL-ETICLL-LAYKIKHPETFFLLRGNHESA 198 (384)
Q Consensus 142 L~~il~~~g~~~~~~~vfLGD~VDRG~~s~-evl~ll-~~Lk~~~p~~v~lLrGNHE~~ 198 (384)
+.++.+.+.....+.++++||+++...... +....+ .......+-.+++++||||..
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccc
Confidence 344444444445688999999998654332 211111 111123455799999999985
No 65
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.47 E-value=0.00031 Score=65.73 Aligned_cols=69 Identities=26% Similarity=0.301 Sum_probs=45.8
Q ss_pred CeeEEecCCCC------------HHHHHHHHHhCCCC--CCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcC
Q psy1403 128 PLKICGDVHGQ------------YTDLLRLFDHGKFP--PASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRG 193 (384)
Q Consensus 128 ~i~ViGDIHG~------------~~~L~~il~~~g~~--~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrG 193 (384)
++++++|+|=. ...|.++++.+.-. ..+-+|++||+++.|.. +....+.....+.+-.++.++|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~l~~~~~p~~~v~G 78 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSP--ESYERLRELLAALPIPVYLLPG 78 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCH--HHHHHHHHHHhhcCCCEEEeCC
Confidence 57899999944 34567777765433 55678899999998752 2222222222223556999999
Q ss_pred CCcch
Q psy1403 194 NHESA 198 (384)
Q Consensus 194 NHE~~ 198 (384)
|||..
T Consensus 79 NHD~~ 83 (240)
T cd07402 79 NHDDR 83 (240)
T ss_pred CCCCH
Confidence 99974
No 66
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.45 E-value=0.00024 Score=70.98 Aligned_cols=71 Identities=23% Similarity=0.334 Sum_probs=47.9
Q ss_pred CeeEEecCC-C-----------CHHHHHHHHHhCCCCCCCceEeecceeccC-CCcHHHHHHHHH--HH--HhcCCcEEE
Q psy1403 128 PLKICGDVH-G-----------QYTDLLRLFDHGKFPPASNYLFLGDYVDRG-KQSLETICLLLA--YK--IKHPETFFL 190 (384)
Q Consensus 128 ~i~ViGDIH-G-----------~~~~L~~il~~~g~~~~~~~vfLGD~VDRG-~~s~evl~ll~~--Lk--~~~p~~v~l 190 (384)
+++.+||+| | ....|.++++.+.-...+.+++.||++|+. +.+.+++.++.. ++ ...+-.+++
T Consensus 2 KilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~ 81 (340)
T PHA02546 2 KILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLHV 81 (340)
T ss_pred eEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 688999999 4 234455665555445557788999999985 455555544433 21 123557999
Q ss_pred EcCCCcch
Q psy1403 191 LRGNHESA 198 (384)
Q Consensus 191 LrGNHE~~ 198 (384)
+.||||..
T Consensus 82 I~GNHD~~ 89 (340)
T PHA02546 82 LVGNHDMY 89 (340)
T ss_pred EccCCCcc
Confidence 99999974
No 67
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.44 E-value=0.00096 Score=59.24 Aligned_cols=47 Identities=26% Similarity=0.295 Sum_probs=29.7
Q ss_pred CCCCceEeecceeccCCCc-HHHH-HHHHHHHHh---c-CCcEEEEcCCCcch
Q psy1403 152 PPASNYLFLGDYVDRGKQS-LETI-CLLLAYKIK---H-PETFFLLRGNHESA 198 (384)
Q Consensus 152 ~~~~~~vfLGD~VDRG~~s-~evl-~ll~~Lk~~---~-p~~v~lLrGNHE~~ 198 (384)
...+.++++||++|.+... .+.. ..+..++.. . +-.++++.||||..
T Consensus 37 ~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 3457788999999987643 2222 222223222 1 34699999999975
No 68
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.39 E-value=0.0004 Score=63.94 Aligned_cols=69 Identities=25% Similarity=0.324 Sum_probs=39.0
Q ss_pred eEEecCC---CCHHH---HHHHHHhCCCCCCCceEeecceeccC--CC------cHHHHHHHHHHHHhcCCcEEEEcCCC
Q psy1403 130 KICGDVH---GQYTD---LLRLFDHGKFPPASNYLFLGDYVDRG--KQ------SLETICLLLAYKIKHPETFFLLRGNH 195 (384)
Q Consensus 130 ~ViGDIH---G~~~~---L~~il~~~g~~~~~~~vfLGD~VDRG--~~------s~evl~ll~~Lk~~~p~~v~lLrGNH 195 (384)
++|+|+| +...+ +...++.......+.++++||++|.- .. ..+.+..++.+. ..+..++.+.|||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~~v~GNH 79 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLA-DRGTRVYYVPGNH 79 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHH-HCCCeEEEECCCc
Confidence 4899999 22222 22222221113567899999999842 11 112223333332 3456799999999
Q ss_pred cchh
Q psy1403 196 ESAN 199 (384)
Q Consensus 196 E~~~ 199 (384)
|...
T Consensus 80 D~~~ 83 (217)
T cd07398 80 DFLL 83 (217)
T ss_pred hHHH
Confidence 9853
No 69
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.39 E-value=0.00029 Score=68.01 Aligned_cols=70 Identities=19% Similarity=0.365 Sum_probs=45.2
Q ss_pred eeEEecCCCCHHHHHHHHHh---CCCCCCCceEeecceeccCCC-cHHHHH------HHH---HH---HHhcCCcEEEEc
Q psy1403 129 LKICGDVHGQYTDLLRLFDH---GKFPPASNYLFLGDYVDRGKQ-SLETIC------LLL---AY---KIKHPETFFLLR 192 (384)
Q Consensus 129 i~ViGDIHG~~~~L~~il~~---~g~~~~~~~vfLGD~VDRG~~-s~evl~------ll~---~L---k~~~p~~v~lLr 192 (384)
|+|+||+||+++.+.+.++. -...+.+-+|++||+-..+.. ..+.+. -+. .+ ....|-.++++-
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 68999999999998765443 223456778899999754432 232221 111 11 223566689999
Q ss_pred CCCcch
Q psy1403 193 GNHESA 198 (384)
Q Consensus 193 GNHE~~ 198 (384)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999974
No 70
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.38 E-value=0.00032 Score=64.48 Aligned_cols=74 Identities=22% Similarity=0.259 Sum_probs=49.3
Q ss_pred CeeEEecCC-CCH--------------HHHHHHHHhCCCCCCCceEeecceeccCCCcHHHHHHHHHHHHhc---CCcEE
Q psy1403 128 PLKICGDVH-GQY--------------TDLLRLFDHGKFPPASNYLFLGDYVDRGKQSLETICLLLAYKIKH---PETFF 189 (384)
Q Consensus 128 ~i~ViGDIH-G~~--------------~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~---p~~v~ 189 (384)
+|+.++|+| |.. ..|.++++.+.....+.+|+.||++|....+.+.+..+...-.+. .-.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 578999999 322 235666665544455678899999998876555444443322222 45699
Q ss_pred EEcCCCcchhhh
Q psy1403 190 LLRGNHESANIN 201 (384)
Q Consensus 190 lLrGNHE~~~~~ 201 (384)
++.||||.....
T Consensus 81 ~~~GNHD~~~~~ 92 (223)
T cd00840 81 IIAGNHDSPSRL 92 (223)
T ss_pred EecCCCCCcccc
Confidence 999999986543
No 71
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=97.35 E-value=0.001 Score=70.20 Aligned_cols=71 Identities=23% Similarity=0.310 Sum_probs=49.2
Q ss_pred ChhhHHHHHHhcCCc----eEEEeeeeee--cCeEE-ecCCeEEEE---eccCCCCCCCCCceEEEEEcCCCceEEEEec
Q psy1403 298 GPNVVKTFLDKHHMD----LICRAHQVVE--EGYEF-FADKKLVTL---FSAPNYCGEFDNAGAMMSVDQNLMCSFQILK 367 (384)
Q Consensus 298 g~~~~~~fl~~~~l~----~iIRgH~~~~--~G~~~-~~~~~~iTv---fSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~ 367 (384)
.++..+..|+.+|++ .||-||+||. .|-.. .++||++.| ||.. |...++=+|--| |.+.-.......+
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~TGIAGYTL-iyNS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTTGIAGYTL-IYNSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hccccCccceEE-EecCCcceeccCC
Confidence 346677889999998 9999999986 66553 589999988 6654 655554455444 4444455666666
Q ss_pred CCc
Q psy1403 368 PTE 370 (384)
Q Consensus 368 ~~~ 370 (384)
|-.
T Consensus 585 pF~ 587 (640)
T PF06874_consen 585 PFE 587 (640)
T ss_pred CCC
Confidence 644
No 72
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.11 E-value=0.0013 Score=62.01 Aligned_cols=69 Identities=17% Similarity=0.167 Sum_probs=43.6
Q ss_pred CCeeEEecCC-CCHHH----------------HHHHHHhCCCCCCCceEeecceeccCCCc---HHHHHHHHHHHHhcCC
Q psy1403 127 PPLKICGDVH-GQYTD----------------LLRLFDHGKFPPASNYLFLGDYVDRGKQS---LETICLLLAYKIKHPE 186 (384)
Q Consensus 127 ~~i~ViGDIH-G~~~~----------------L~~il~~~g~~~~~~~vfLGD~VDRG~~s---~evl~ll~~Lk~~~p~ 186 (384)
++..||+|+| |--.. |.++.+.......+.++++||+.+..... .++.+++..+ ..
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT----FR 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc----CC
Confidence 6789999999 54332 22333333334457899999999765542 2223333322 34
Q ss_pred cEEEEcCCCcchh
Q psy1403 187 TFFLLRGNHESAN 199 (384)
Q Consensus 187 ~v~lLrGNHE~~~ 199 (384)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999754
No 73
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.10 E-value=0.0008 Score=60.22 Aligned_cols=67 Identities=25% Similarity=0.323 Sum_probs=43.2
Q ss_pred eeEEecCCCCHHHH---------------HHHHHhCC--CCCCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEE
Q psy1403 129 LKICGDVHGQYTDL---------------LRLFDHGK--FPPASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLL 191 (384)
Q Consensus 129 i~ViGDIHG~~~~L---------------~~il~~~g--~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lL 191 (384)
+++++|+|=..... .++++... ..+.+.++++||++++|..+.. +.++.. .+..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~----~~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSR----LNGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHh----CCCCeEEE
Confidence 36788888655432 22232211 2345789999999999986543 344333 34569999
Q ss_pred cCCCcchhh
Q psy1403 192 RGNHESANI 200 (384)
Q Consensus 192 rGNHE~~~~ 200 (384)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997644
No 74
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.07 E-value=0.0011 Score=67.87 Aligned_cols=71 Identities=21% Similarity=0.319 Sum_probs=45.9
Q ss_pred CeeEEecCC-CC-H------HH----HHHHHHhCCCCCCCceEeecceeccCCCcHHHH----HHHHHHHHhcCCcEEEE
Q psy1403 128 PLKICGDVH-GQ-Y------TD----LLRLFDHGKFPPASNYLFLGDYVDRGKQSLETI----CLLLAYKIKHPETFFLL 191 (384)
Q Consensus 128 ~i~ViGDIH-G~-~------~~----L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl----~ll~~Lk~~~p~~v~lL 191 (384)
+++.++|+| |. + .+ |..+.+.+.-...+.+|+.||++|++..+.+.. .++..|+. .+-.++++
T Consensus 2 kilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v~~I 80 (407)
T PRK10966 2 RILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQLVVL 80 (407)
T ss_pred EEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcEEEE
Confidence 678999999 32 1 11 334444444455677889999999986554432 23334442 34569999
Q ss_pred cCCCcchh
Q psy1403 192 RGNHESAN 199 (384)
Q Consensus 192 rGNHE~~~ 199 (384)
.||||...
T Consensus 81 ~GNHD~~~ 88 (407)
T PRK10966 81 AGNHDSVA 88 (407)
T ss_pred cCCCCChh
Confidence 99999753
No 75
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=96.91 E-value=0.0021 Score=65.74 Aligned_cols=73 Identities=18% Similarity=0.226 Sum_probs=55.6
Q ss_pred CCeeEEecCCCC------------HHHHHHHHHhCCCCCCCceEeecceeccCCCcHHHHHHHHHHHHh-----------
Q psy1403 127 PPLKICGDVHGQ------------YTDLLRLFDHGKFPPASNYLFLGDYVDRGKQSLETICLLLAYKIK----------- 183 (384)
Q Consensus 127 ~~i~ViGDIHG~------------~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~----------- 183 (384)
.+|.+++|+|-- +..|.++++.+.-...+-+|+.||++|++.-|.+++..++.+-.+
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~~ 83 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCELE 83 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccchh
Confidence 478999999942 557788888776566677889999999999898887665443322
Q ss_pred -------------------------cCCcEEEEcCCCcchh
Q psy1403 184 -------------------------HPETFFLLRGNHESAN 199 (384)
Q Consensus 184 -------------------------~p~~v~lLrGNHE~~~ 199 (384)
..-.||.+-||||...
T Consensus 84 ~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 84 FLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1336999999999964
No 76
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.85 E-value=0.0087 Score=53.97 Aligned_cols=48 Identities=25% Similarity=0.320 Sum_probs=30.6
Q ss_pred CCCCceEeecceeccCCCcH--HHHHHHHHHHHhc--------CCcEEEEcCCCcchh
Q psy1403 152 PPASNYLFLGDYVDRGKQSL--ETICLLLAYKIKH--------PETFFLLRGNHESAN 199 (384)
Q Consensus 152 ~~~~~~vfLGD~VDRG~~s~--evl~ll~~Lk~~~--------p~~v~lLrGNHE~~~ 199 (384)
...+.++++||++|.|.... +....+..++..+ +-.++.+.||||...
T Consensus 44 ~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 44 LKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred cCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 34577889999999887432 2222222222211 346999999999864
No 77
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=96.82 E-value=0.0038 Score=59.39 Aligned_cols=72 Identities=19% Similarity=0.211 Sum_probs=52.2
Q ss_pred CeeEEecCCCC------HHHHHHHHHhCCCCCCCceEeecceeccCCCcHHHHHHHHHHHH--hcCCcEEEEcCCCcchh
Q psy1403 128 PLKICGDVHGQ------YTDLLRLFDHGKFPPASNYLFLGDYVDRGKQSLETICLLLAYKI--KHPETFFLLRGNHESAN 199 (384)
Q Consensus 128 ~i~ViGDIHG~------~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~--~~p~~v~lLrGNHE~~~ 199 (384)
+++.|+|+|-. ...+.++++.+...+.+-+|+.||+.+.|. .+-...+..+-. ..+..++.++||||.+.
T Consensus 2 ~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~~ 79 (301)
T COG1409 2 RIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDARV 79 (301)
T ss_pred eEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCCc
Confidence 57889999977 345566777777666688999999999964 222333333222 56778999999999987
Q ss_pred hh
Q psy1403 200 IN 201 (384)
Q Consensus 200 ~~ 201 (384)
.+
T Consensus 80 ~~ 81 (301)
T COG1409 80 VN 81 (301)
T ss_pred hH
Confidence 65
No 78
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=96.76 E-value=0.0026 Score=60.95 Aligned_cols=71 Identities=20% Similarity=0.165 Sum_probs=42.0
Q ss_pred eeEEecCCCCHH------HH-HHHHHhCCCCCCCceEeecceeccCCCc--------H---HHHHHHHHHHHhcCCcEEE
Q psy1403 129 LKICGDVHGQYT------DL-LRLFDHGKFPPASNYLFLGDYVDRGKQS--------L---ETICLLLAYKIKHPETFFL 190 (384)
Q Consensus 129 i~ViGDIHG~~~------~L-~~il~~~g~~~~~~~vfLGD~VDRG~~s--------~---evl~ll~~Lk~~~p~~v~l 190 (384)
++.++|+|-... .. ..+++.+.....+-+|++||++|++... . +.+..+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 567899995321 12 2344444444456788999999976521 1 1122222222223567999
Q ss_pred EcCCCcchh
Q psy1403 191 LRGNHESAN 199 (384)
Q Consensus 191 LrGNHE~~~ 199 (384)
++||||...
T Consensus 82 v~GNHD~~~ 90 (256)
T cd07401 82 IRGNHDLFN 90 (256)
T ss_pred eCCCCCcCC
Confidence 999999953
No 79
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.73 E-value=0.0061 Score=59.57 Aligned_cols=71 Identities=23% Similarity=0.188 Sum_probs=48.9
Q ss_pred CeeEEecCCCCHHH--HHHHHHhCCCCCCCceEeecceecc--CCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhh
Q psy1403 128 PLKICGDVHGQYTD--LLRLFDHGKFPPASNYLFLGDYVDR--GKQSLETICLLLAYKIKHPETFFLLRGNHESANI 200 (384)
Q Consensus 128 ~i~ViGDIHG~~~~--L~~il~~~g~~~~~~~vfLGD~VDR--G~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~ 200 (384)
+|+-++|+|-.... ..+.+........+-+++.|||+|+ -+....+...|..|+ .|-.+|.+.||||...-
T Consensus 46 ~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~--~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 46 KIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLK--APLGVFAVLGNHDYGVD 120 (284)
T ss_pred EEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhh--ccCCEEEEecccccccc
Confidence 58999999987655 2233333333333667799999995 445555666666666 56679999999987644
No 80
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=96.50 E-value=0.0025 Score=61.51 Aligned_cols=69 Identities=16% Similarity=0.160 Sum_probs=40.8
Q ss_pred CeeEEecCCC----CHHHHHHHHHhCCCCCCCceEeecceeccC-CCc----HHHHHHHHHHHHhcCCcEEEEcCCCcch
Q psy1403 128 PLKICGDVHG----QYTDLLRLFDHGKFPPASNYLFLGDYVDRG-KQS----LETICLLLAYKIKHPETFFLLRGNHESA 198 (384)
Q Consensus 128 ~i~ViGDIHG----~~~~L~~il~~~g~~~~~~~vfLGD~VDRG-~~s----~evl~ll~~Lk~~~p~~v~lLrGNHE~~ 198 (384)
+++|+||.|. ....+.++.+. ....+-++++||+++-+ ..+ -..+..+..+.. .-.++.++||||..
T Consensus 6 ~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~~~GNHD~~ 81 (294)
T cd00839 6 KFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLAS--YVPYMVTPGNHEAD 81 (294)
T ss_pred EEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHh--cCCcEEcCcccccc
Confidence 6899999995 23333334333 23445678999999544 321 122233322322 23589999999986
Q ss_pred hh
Q psy1403 199 NI 200 (384)
Q Consensus 199 ~~ 200 (384)
..
T Consensus 82 ~~ 83 (294)
T cd00839 82 YN 83 (294)
T ss_pred cC
Confidence 44
No 81
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.49 E-value=0.0039 Score=59.04 Aligned_cols=68 Identities=18% Similarity=0.179 Sum_probs=38.6
Q ss_pred eEEecCC--CCH---HHHHHHHHhC-CCC----CCCceEeecceeccCCC------------c----HHHHHHHHHHHHh
Q psy1403 130 KICGDVH--GQY---TDLLRLFDHG-KFP----PASNYLFLGDYVDRGKQ------------S----LETICLLLAYKIK 183 (384)
Q Consensus 130 ~ViGDIH--G~~---~~L~~il~~~-g~~----~~~~~vfLGD~VDRG~~------------s----~evl~ll~~Lk~~ 183 (384)
++++|+| +.. ..+..+++.+ +.. ..+.++++||++|+... . .++..++..|.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 6799999 331 2223333322 221 23678899999997310 0 11223333332
Q ss_pred cCCcEEEEcCCCcchh
Q psy1403 184 HPETFFLLRGNHESAN 199 (384)
Q Consensus 184 ~p~~v~lLrGNHE~~~ 199 (384)
..-.|+++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 2356999999999853
No 82
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.40 E-value=0.084 Score=50.78 Aligned_cols=31 Identities=10% Similarity=0.139 Sum_probs=24.7
Q ss_pred cChhhHHHHHHhcCCceEEEeeeeeecCeEEec
Q psy1403 297 FGPNVVKTFLDKHHMDLICRAHQVVEEGYEFFA 329 (384)
Q Consensus 297 fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~ 329 (384)
-.++.++..|++.+-.+|.-||+. ++++..+
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH--~~C~~~h 233 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH--DYCEVVH 233 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC--ccceeEc
Confidence 367889999999999999999987 4555443
No 83
>KOG0376|consensus
Probab=96.10 E-value=0.003 Score=64.89 Aligned_cols=239 Identities=11% Similarity=-0.003 Sum_probs=148.2
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeeCC----CeeEEecCCCCHHHHHHHHHhCCCCCCC-ceEeecceeccCCCcHHH
Q psy1403 99 RLEEKEIVSLIQISRKIFMSQPMLLELEP----PLKICGDVHGQYTDLLRLFDHGKFPPAS-NYLFLGDYVDRGKQSLET 173 (384)
Q Consensus 99 ~l~~~~i~~l~~~a~~il~~ep~ll~i~~----~i~ViGDIHG~~~~L~~il~~~g~~~~~-~~vfLGD~VDRG~~s~ev 173 (384)
.|...++..+++.+.+++.-+|+-..+.+ -.+.++|.||.+.|+.++++.- |... -|++-|++++++....+.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A 91 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKA 91 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHH
Confidence 35667788888889999999998776632 3789999999999999998854 3333 499999999999999999
Q ss_pred HHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHhch---HHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCC
Q psy1403 174 ICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECKRRYNV---KLWKTFTECFNCMPVAAIVDEKIFCCHGGLSPDL 250 (384)
Q Consensus 174 l~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~---~~~~~~~~~f~~LPl~a~i~~~il~vHgGisp~~ 250 (384)
+..+...+...|+...+.|++||+..+...++|..+....++. .++..+...+-. |+.....+.++ -|.-++-.+
T Consensus 92 ~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~~~~~-~i~~~y~g~~l-e~~kvt~e~ 169 (476)
T KOG0376|consen 92 LLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDEEDMD-LIESDYSGPVL-EDHKVTLEF 169 (476)
T ss_pred HHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCcccccccccccccc-ccccccCCccc-ccchhhHHH
Confidence 9999999999999999999999999988888887665544421 111111111110 12222222111 111100000
Q ss_pred --------------------CChhhhc----CCCCCCCCCCcchHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHH
Q psy1403 251 --------------------DSFEDIK----RIPRPTDVPDQGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFL 306 (384)
Q Consensus 251 --------------------~~l~~i~----~i~r~~~~~~~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl 306 (384)
.-++... .+..+.++. .-.|..|+++......+-+..++.+...++.....|+
T Consensus 170 vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~---~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~yl 246 (476)
T KOG0376|consen 170 VKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEIS---VPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYL 246 (476)
T ss_pred HHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEee---cCCCceEEecCCccccccchhhhHhhcCCCCCccccc
Confidence 0001111 111111111 2245677777655555555666666666777777777
Q ss_pred HhcCCceEEEeeeee------------ecCeEEecC---CeEEEEeccCCCCC
Q psy1403 307 DKHHMDLICRAHQVV------------EEGYEFFAD---KKLVTLFSAPNYCG 344 (384)
Q Consensus 307 ~~~~l~~iIRgH~~~------------~~G~~~~~~---~~~iTvfSa~~y~~ 344 (384)
...++.-+.+.|.-+ ..+|....+ +.+.++|+++.+|-
T Consensus 247 fngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 247 FNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred ccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 777777777766442 112222211 24677888887764
No 84
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.01 E-value=0.012 Score=52.12 Aligned_cols=119 Identities=17% Similarity=0.243 Sum_probs=80.0
Q ss_pred eEEecCCCCHHHHHHHHHhCC--CCCCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcch
Q psy1403 130 KICGDVHGQYTDLLRLFDHGK--FPPASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFY 207 (384)
Q Consensus 130 ~ViGDIHG~~~~L~~il~~~g--~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~ 207 (384)
.|+||+||+++.+.+-++... -.+-+-++++||+..-...+-+. .-...=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~-~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEEL-EAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhH-HHHhcCCccCCCCEEEECCCCC-----------
Confidence 489999999999877666532 23446788999999866555333 3333334467888999999998
Q ss_pred HHHHHHhchHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCCCCCCC
Q psy1403 208 DECKRRYNVKLWKTFTECFNCMPVAAIVDEKIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNNILDWG 287 (384)
Q Consensus 208 ~e~~~~~~~~~~~~~~~~f~~LPl~a~i~~~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~~~~~~ 287 (384)
+-.||++|.=+. .+...++.. .+
T Consensus 69 ----------------------------~~DILlTh~wP~-gi~~~~~~~-------------------~~--------- 91 (150)
T cd07380 69 ----------------------------GVDILLTSEWPK-GISKLSKVP-------------------FE--------- 91 (150)
T ss_pred ----------------------------CCCEEECCCCch-hhhhhCCCc-------------------cc---------
Confidence 557999998432 111111110 00
Q ss_pred CCCCCcccccChhhHHHHHHhcCCceEEEeeeee
Q psy1403 288 DNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQVV 321 (384)
Q Consensus 288 ~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~ 321 (384)
+.+..-|...+.+++++..=.+.+.||..+
T Consensus 92 ----~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 92 ----ETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ----ccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 012345788999999999999999999764
No 85
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=95.94 E-value=0.013 Score=54.09 Aligned_cols=46 Identities=20% Similarity=0.335 Sum_probs=33.3
Q ss_pred CCCceEeecceeccCCCcH--HHHHHHHHHHHhcC----CcEEEEcCCCcch
Q psy1403 153 PASNYLFLGDYVDRGKQSL--ETICLLLAYKIKHP----ETFFLLRGNHESA 198 (384)
Q Consensus 153 ~~~~~vfLGD~VDRG~~s~--evl~ll~~Lk~~~p----~~v~lLrGNHE~~ 198 (384)
..+-++|+||++|.|+.+. +....+..++..++ -.++.+.||||.-
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 4577889999999998542 35666655554322 3688999999975
No 86
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=95.76 E-value=0.04 Score=49.01 Aligned_cols=46 Identities=20% Similarity=0.216 Sum_probs=31.8
Q ss_pred CCCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhh
Q psy1403 152 PPASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANIN 201 (384)
Q Consensus 152 ~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~ 201 (384)
.|.+.+.+|||+.-.-....+..+++-+ -+++.++++||||..--.
T Consensus 44 ~p~D~lwhLGDl~~~~n~~~~a~~Iler----LnGrkhlv~GNhDk~~~~ 89 (186)
T COG4186 44 GPDDVLWHLGDLSSGANRERAAGLILER----LNGRKHLVPGNHDKCHPM 89 (186)
T ss_pred CccceEEEecccccccchhhHHHHHHHH----cCCcEEEeeCCCCCCccc
Confidence 4667788999999754444444343333 478899999999986443
No 87
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=95.47 E-value=0.017 Score=54.56 Aligned_cols=66 Identities=26% Similarity=0.294 Sum_probs=42.4
Q ss_pred CeeEEecCCCCH---------HHHHHHHHhCCCCCCC-ceEeecceeccCCCcH-----HHHHHHHHHHHhcCCcEEEEc
Q psy1403 128 PLKICGDVHGQY---------TDLLRLFDHGKFPPAS-NYLFLGDYVDRGKQSL-----ETICLLLAYKIKHPETFFLLR 192 (384)
Q Consensus 128 ~i~ViGDIHG~~---------~~L~~il~~~g~~~~~-~~vfLGD~VDRG~~s~-----evl~ll~~Lk~~~p~~v~lLr 192 (384)
+|+.++|+||.+ ..+..+++...-...+ -++..||+++.++.+. .++..+-.+. -. ++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g----~d-~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG----YD-AVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC----CC-EEee
Confidence 478899999887 4556666665433333 4567999999877543 4444443332 23 3556
Q ss_pred CCCcch
Q psy1403 193 GNHESA 198 (384)
Q Consensus 193 GNHE~~ 198 (384)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999974
No 88
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=95.45 E-value=0.038 Score=52.10 Aligned_cols=73 Identities=16% Similarity=0.220 Sum_probs=43.9
Q ss_pred CCeeEEecCCCCHHHHHHHHHhCCCCCCCceEeecceeccCCCcH-------------------------HHHHHHHHHH
Q psy1403 127 PPLKICGDVHGQYTDLLRLFDHGKFPPASNYLFLGDYVDRGKQSL-------------------------ETICLLLAYK 181 (384)
Q Consensus 127 ~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~-------------------------evl~ll~~Lk 181 (384)
.+|..++|.||+++.+.++.+.+.-...+-++|+||++-....+. |.++-++..-
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L 85 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL 85 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH
Confidence 468999999999999999988765556678999999986443322 2333333333
Q ss_pred HhcCCcEEEEcCCCcchh
Q psy1403 182 IKHPETFFLLRGNHESAN 199 (384)
Q Consensus 182 ~~~p~~v~lLrGNHE~~~ 199 (384)
-..+-.+++++||||...
T Consensus 86 ~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 86 GELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HCC-SEEEEE--TTS-SH
T ss_pred HhcCCcEEEecCCCCchH
Confidence 346668999999999863
No 89
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.16 E-value=0.037 Score=51.12 Aligned_cols=66 Identities=18% Similarity=0.176 Sum_probs=42.2
Q ss_pred ecCCCCHHHHHHHHHhCCC-CCCCceEeecceeccCCCcHHH-HHHHHHHHHhc---------------------CCcEE
Q psy1403 133 GDVHGQYTDLLRLFDHGKF-PPASNYLFLGDYVDRGKQSLET-ICLLLAYKIKH---------------------PETFF 189 (384)
Q Consensus 133 GDIHG~~~~L~~il~~~g~-~~~~~~vfLGD~VDRG~~s~ev-l~ll~~Lk~~~---------------------p~~v~ 189 (384)
=|++|+=.=|.++++.+-. -..+.++||||++|.|--+-+- -.....++..+ .-.++
T Consensus 23 ld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i 102 (193)
T cd08164 23 LDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLI 102 (193)
T ss_pred ehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEE
Confidence 3567776667777776543 3456788999999987543322 23333333322 13578
Q ss_pred EEcCCCcch
Q psy1403 190 LLRGNHESA 198 (384)
Q Consensus 190 lLrGNHE~~ 198 (384)
+|.||||.-
T Consensus 103 ~V~GNHDIG 111 (193)
T cd08164 103 NIAGNHDVG 111 (193)
T ss_pred EECCcccCC
Confidence 999999984
No 90
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=94.95 E-value=0.062 Score=54.49 Aligned_cols=73 Identities=21% Similarity=0.203 Sum_probs=50.4
Q ss_pred CeeEEecCCCC-------------HHHHHHHHHhCCCCCCCceEeecceeccCCCcHHHHHHHHHHHHhc---CCcEEEE
Q psy1403 128 PLKICGDVHGQ-------------YTDLLRLFDHGKFPPASNYLFLGDYVDRGKQSLETICLLLAYKIKH---PETFFLL 191 (384)
Q Consensus 128 ~i~ViGDIHG~-------------~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~---p~~v~lL 191 (384)
+|.-++|.|=- +.+|..+++.+.-...+-+|.-||+.|++.-|.+++..+...-.+. .-.|++|
T Consensus 2 kilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~I 81 (390)
T COG0420 2 KILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVVI 81 (390)
T ss_pred eeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEEe
Confidence 57778888844 3444455555444444778899999999988888776665433322 2379999
Q ss_pred cCCCcchhh
Q psy1403 192 RGNHESANI 200 (384)
Q Consensus 192 rGNHE~~~~ 200 (384)
.||||...-
T Consensus 82 ~GNHD~~~~ 90 (390)
T COG0420 82 AGNHDSPSR 90 (390)
T ss_pred cCCCCchhc
Confidence 999999643
No 91
>PLN02533 probable purple acid phosphatase
Probab=94.31 E-value=0.05 Score=56.19 Aligned_cols=70 Identities=14% Similarity=0.122 Sum_probs=39.8
Q ss_pred CCeeEEecCCCCHHHHHHHHHhCCCCCCCceEeecceeccCCCcH---HHHHHHHHHHHhcCCcEEEEcCCCcchh
Q psy1403 127 PPLKICGDVHGQYTDLLRLFDHGKFPPASNYLFLGDYVDRGKQSL---ETICLLLAYKIKHPETFFLLRGNHESAN 199 (384)
Q Consensus 127 ~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~---evl~ll~~Lk~~~p~~v~lLrGNHE~~~ 199 (384)
-+++++||+|-. ......++.+.....+-++++||+++-+...- +-..++..+.... .++.+.||||...
T Consensus 140 ~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~--P~m~~~GNHE~~~ 212 (427)
T PLN02533 140 IKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQR--PWMVTHGNHELEK 212 (427)
T ss_pred eEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcC--ceEEeCccccccc
Confidence 468999999632 22223333333334566789999997543221 1122222222223 4889999999864
No 92
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=94.05 E-value=0.058 Score=52.02 Aligned_cols=66 Identities=20% Similarity=0.199 Sum_probs=38.2
Q ss_pred CeeEEecCCCCHH----------------HHHHHHHhCCCCCCCceEe-ecceeccCCCc-----------HHHHHHHHH
Q psy1403 128 PLKICGDVHGQYT----------------DLLRLFDHGKFPPASNYLF-LGDYVDRGKQS-----------LETICLLLA 179 (384)
Q Consensus 128 ~i~ViGDIHG~~~----------------~L~~il~~~g~~~~~~~vf-LGD~VDRG~~s-----------~evl~ll~~ 179 (384)
.|+.++|+||++. .+..+++...-...+.+++ .||+++..+.+ ..++..+-.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 4678899999963 3455555543322233333 79999865421 234444444
Q ss_pred HHHhcCCcEEEEcCCCcch
Q psy1403 180 YKIKHPETFFLLRGNHESA 198 (384)
Q Consensus 180 Lk~~~p~~v~lLrGNHE~~ 198 (384)
+. . -++..||||..
T Consensus 82 ~g---~--d~~~lGNHe~d 95 (277)
T cd07410 82 LG---Y--DAGTLGNHEFN 95 (277)
T ss_pred cC---C--CEEeecccCcc
Confidence 43 2 25556999963
No 93
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=93.74 E-value=1.2 Score=46.40 Aligned_cols=207 Identities=17% Similarity=0.159 Sum_probs=104.5
Q ss_pred CeeEEecCCC-CHHH----HHHHHHhCCC----CCCCceE-eecceeccC------------CCcHHHHHHHHHHHHhcC
Q psy1403 128 PLKICGDVHG-QYTD----LLRLFDHGKF----PPASNYL-FLGDYVDRG------------KQSLETICLLLAYKIKHP 185 (384)
Q Consensus 128 ~i~ViGDIHG-~~~~----L~~il~~~g~----~~~~~~v-fLGD~VDRG------------~~s~evl~ll~~Lk~~~p 185 (384)
.+++++|+|= ...- +.+.++-++- .+..+|+ .-||.||.. .+..+-.+.+..+--+-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 3789999995 3322 3333333222 2334566 688999942 122333444444444455
Q ss_pred C--cEEEEcCCCcchhhhhhh-cchHHHHHHhchHHHHHHHHHHccCCcEEEE-cCcEEEecCCCCCCCCChhhhcCCCC
Q psy1403 186 E--TFFLLRGNHESANINRIY-GFYDECKRRYNVKLWKTFTECFNCMPVAAIV-DEKIFCCHGGLSPDLDSFEDIKRIPR 261 (384)
Q Consensus 186 ~--~v~lLrGNHE~~~~~~~~-gf~~e~~~~~~~~~~~~~~~~f~~LPl~a~i-~~~il~vHgGisp~~~~l~~i~~i~r 261 (384)
+ .+++.+||||..-....- .+..... .++...+-.|-.-|...-+ +..+|..||= +++++...-.
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~~k-----slf~~~n~~~v~NP~~~~l~G~~vL~~hG~------sidDii~~vP 375 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPELIK-----SLFSLNNLLFVSNPALVSLHGVDVLIYHGR------SIDDIIKLVP 375 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchhhc-----ccccccceEecCCCcEEEECCEEEEEecCC------CHHHHHhhCC
Confidence 5 588999999997554322 2222222 2222222223333444344 3468888882 5666543322
Q ss_pred CCC--CCCcchHHHhhhcCCCCCCCCCCCCCCCcccccChhhHHHHHHhcCCceEEEeeeeeecCeEEecCCeEEEEecc
Q psy1403 262 PTD--VPDQGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQVVEEGYEFFADKKLVTLFSA 339 (384)
Q Consensus 262 ~~~--~~~~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa 339 (384)
..+ -+.....+-|.|.-=.+...+-.+- +-|.+|. |.=.---++++.||++. .|+..+.+.+++..+|-
T Consensus 376 ~~~~~~~~~ame~lLk~rHlaPtygg~~p~-----aP~~kD~---lVIeevPDv~~~Ghvh~-~g~~~y~gv~~vns~T~ 446 (481)
T COG1311 376 GADYDSPLKAMEELLKRRHLAPTYGGTLPI-----APETKDY---LVIEEVPDVFHTGHVHK-FGTGVYEGVNLVNSGTW 446 (481)
T ss_pred CCCccchHHHHHHHHHhcccCCCCCCcccc-----ccCCcCc---eeeccCCcEEEEccccc-cceeEEeccceEEeeee
Confidence 211 1222233345555433221111100 0011110 00011246789999998 59988888888888887
Q ss_pred CCCCCCCCCceEEEEEcCC
Q psy1403 340 PNYCGEFDNAGAMMSVDQN 358 (384)
Q Consensus 340 ~~y~~~~~n~ga~l~i~~~ 358 (384)
|.+ .-.+-++-|+..
T Consensus 447 q~q----Tefqk~vni~p~ 461 (481)
T COG1311 447 QEQ----TEFQKMVNINPT 461 (481)
T ss_pred cch----hccceEEEecCc
Confidence 755 344556666554
No 94
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=93.46 E-value=1 Score=43.62 Aligned_cols=49 Identities=27% Similarity=0.342 Sum_probs=30.7
Q ss_pred CCCceEeecceeccCCCcH--H------HHHHHHHHHHhcCC-cEEEEcCCCcchhhh
Q psy1403 153 PASNYLFLGDYVDRGKQSL--E------TICLLLAYKIKHPE-TFFLLRGNHESANIN 201 (384)
Q Consensus 153 ~~~~~vfLGD~VDRG~~s~--e------vl~ll~~Lk~~~p~-~v~lLrGNHE~~~~~ 201 (384)
+.+-+|+.||+++-+.... + .-.+...++..+|. .++.+.||||....+
T Consensus 68 ~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~ 125 (296)
T cd00842 68 KPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVN 125 (296)
T ss_pred CCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCccc
Confidence 4566889999998775421 1 11222334433443 699999999987543
No 95
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=93.15 E-value=0.17 Score=48.35 Aligned_cols=70 Identities=21% Similarity=0.234 Sum_probs=39.3
Q ss_pred CeeEEecCCCC--H--HHHHHHHH-hCCCCCCCceEeeccee-ccCCCcH------HHHHHHHHHHHhcCCcEEEEcCCC
Q psy1403 128 PLKICGDVHGQ--Y--TDLLRLFD-HGKFPPASNYLFLGDYV-DRGKQSL------ETICLLLAYKIKHPETFFLLRGNH 195 (384)
Q Consensus 128 ~i~ViGDIHG~--~--~~L~~il~-~~g~~~~~~~vfLGD~V-DRG~~s~------evl~ll~~Lk~~~p~~v~lLrGNH 195 (384)
+++++||.=.. . .++.+.+. .+.....+-+|++||++ +-|..+. +.+..++... ...-.++.+.|||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~-~~~~P~~~v~GNH 80 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAP-SLQVPWYLVLGNH 80 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccch-hhcCCeEEecCCc
Confidence 47889998663 1 23333332 23223446688999997 5554221 2222222211 1234699999999
Q ss_pred cch
Q psy1403 196 ESA 198 (384)
Q Consensus 196 E~~ 198 (384)
|..
T Consensus 81 D~~ 83 (277)
T cd07378 81 DYS 83 (277)
T ss_pred ccC
Confidence 986
No 96
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=92.97 E-value=0.27 Score=46.74 Aligned_cols=74 Identities=19% Similarity=0.196 Sum_probs=46.4
Q ss_pred eCCCeeEEecCCCCHHHHH----------------HHHH-hCCCCCCCceEeecceeccCCC-----cHHHHHHHHHHHH
Q psy1403 125 LEPPLKICGDVHGQYTDLL----------------RLFD-HGKFPPASNYLFLGDYVDRGKQ-----SLETICLLLAYKI 182 (384)
Q Consensus 125 i~~~i~ViGDIHG~~~~L~----------------~il~-~~g~~~~~~~vfLGD~VDRG~~-----s~evl~ll~~Lk~ 182 (384)
...+..|++|+|=-+.... +.+. .......+++|.+||+-.-.+. ..++-.++-.++.
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 4678999999996554433 2222 1223345789999999964332 3444444433332
Q ss_pred hcCCcEEEEcCCCcchhhh
Q psy1403 183 KHPETFFLLRGNHESANIN 201 (384)
Q Consensus 183 ~~p~~v~lLrGNHE~~~~~ 201 (384)
. .+.+++||||...-.
T Consensus 98 -~--evi~i~GNHD~~i~~ 113 (235)
T COG1407 98 -R--EVIIIRGNHDNGIEE 113 (235)
T ss_pred -C--cEEEEeccCCCcccc
Confidence 2 499999999986544
No 97
>KOG3325|consensus
Probab=92.05 E-value=3.2 Score=36.89 Aligned_cols=115 Identities=25% Similarity=0.401 Sum_probs=77.6
Q ss_pred eeEEecCCC--CHHHHHHHHHhCCCCCC-CceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhc
Q psy1403 129 LKICGDVHG--QYTDLLRLFDHGKFPPA-SNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYG 205 (384)
Q Consensus 129 i~ViGDIHG--~~~~L~~il~~~g~~~~-~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~g 205 (384)
+.++||+|= ...+|-.=|++.-.|+. .+++++|++. |.|++++|..+. ..++++||--|..
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~------- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN------- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc-------
Confidence 568899984 34455555555556665 5688999965 588999987764 4799999987654
Q ss_pred chHHHHHHhchHHHHHHHHHHccCCcEEEE--c-CcEEEecCCCCCCCCChhhhcCCCCCCCCCCcchHHHhhhcCCCCC
Q psy1403 206 FYDECKRRYNVKLWKTFTECFNCMPVAAIV--D-EKIFCCHGGLSPDLDSFEDIKRIPRPTDVPDQGLLCDLLWSDPDNN 282 (384)
Q Consensus 206 f~~e~~~~~~~~~~~~~~~~f~~LPl~a~i--~-~~il~vHgGisp~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdp~~~ 282 (384)
..-|..-++ + =++-|+||-.- +=|.||.
T Consensus 67 ---------------------~~yP~~kvvtvGqfkIG~chGhqV--------------------------iP~gd~~-- 97 (183)
T KOG3325|consen 67 ---------------------LKYPENKVVTVGQFKIGLCHGHQV--------------------------IPWGDPE-- 97 (183)
T ss_pred ---------------------ccCCccceEEeccEEEEeecCcEe--------------------------ecCCCHH--
Confidence 112333222 2 27889999421 1244542
Q ss_pred CCCCCCCCCCcccccChhhHHHHHHhcCCceEEEeeeeeecCeE
Q psy1403 283 ILDWGDNDRGVSYTFGPNVVKTFLDKHHMDLICRAHQVVEEGYE 326 (384)
Q Consensus 283 ~~~~~~~~rG~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~ 326 (384)
.+.-.-+..+++.++-||+..-+.|+
T Consensus 98 ------------------sL~~LaRqldvDILl~G~Th~f~Aye 123 (183)
T KOG3325|consen 98 ------------------SLALLARQLDVDILLTGHTHKFEAYE 123 (183)
T ss_pred ------------------HHHHHHHhcCCcEEEeCCceeEEEEE
Confidence 45556677899999999999877776
No 98
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=91.35 E-value=0.25 Score=47.15 Aligned_cols=66 Identities=20% Similarity=0.127 Sum_probs=39.1
Q ss_pred CeeEEecCCCCH----------HHHHHHHHhCCCCCCCceEeecceeccCCCc-----HHHHHHHHHHHHhcCCcEEEEc
Q psy1403 128 PLKICGDVHGQY----------TDLLRLFDHGKFPPASNYLFLGDYVDRGKQS-----LETICLLLAYKIKHPETFFLLR 192 (384)
Q Consensus 128 ~i~ViGDIHG~~----------~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s-----~evl~ll~~Lk~~~p~~v~lLr 192 (384)
+|.-++|+||++ ..+..+++...-.+++-++..||+++..+.+ ..++..+-.+. -.+ +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g----~d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVG----YDA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcC----CcE-Ecc
Confidence 467889999985 3455566554333444466799999865532 23333333322 234 456
Q ss_pred CCCcch
Q psy1403 193 GNHESA 198 (384)
Q Consensus 193 GNHE~~ 198 (384)
||||..
T Consensus 77 GNHefd 82 (257)
T cd07408 77 GNHEFD 82 (257)
T ss_pred cccccc
Confidence 999963
No 99
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=91.33 E-value=0.21 Score=48.68 Aligned_cols=66 Identities=27% Similarity=0.321 Sum_probs=40.9
Q ss_pred CeeEEecCCCCHHH--------------HHHHHHhCCCC-CCCceEeecceeccCCC-c-----HHHHHHHHHHHHhcCC
Q psy1403 128 PLKICGDVHGQYTD--------------LLRLFDHGKFP-PASNYLFLGDYVDRGKQ-S-----LETICLLLAYKIKHPE 186 (384)
Q Consensus 128 ~i~ViGDIHG~~~~--------------L~~il~~~g~~-~~~~~vfLGD~VDRG~~-s-----~evl~ll~~Lk~~~p~ 186 (384)
.|..+.|+||++.. +..+++..... ++.-++..||++...+. + ..++..+-++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~---- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV---- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----
Confidence 46788999998653 55566654432 33345679999976553 2 244555554432
Q ss_pred cEEEEcCCCcch
Q psy1403 187 TFFLLRGNHESA 198 (384)
Q Consensus 187 ~v~lLrGNHE~~ 198 (384)
. .+..||||.-
T Consensus 78 D-a~t~GNHefd 88 (288)
T cd07412 78 D-ASAVGNHEFD 88 (288)
T ss_pred e-eeeecccccc
Confidence 2 4566999964
No 100
>KOG3662|consensus
Probab=90.33 E-value=0.5 Score=48.31 Aligned_cols=56 Identities=27% Similarity=0.367 Sum_probs=37.4
Q ss_pred HHHHHHhCCCCCC-CceEeecceeccCCCc--HHHHHHHHHHHHhcCC----cEEEEcCCCcc
Q psy1403 142 LLRLFDHGKFPPA-SNYLFLGDYVDRGKQS--LETICLLLAYKIKHPE----TFFLLRGNHES 197 (384)
Q Consensus 142 L~~il~~~g~~~~-~~~vfLGD~VDRG~~s--~evl~ll~~Lk~~~p~----~v~lLrGNHE~ 197 (384)
|.+.++...+.-. +-++||||++|-|... -|--.....++..++. .+..+.||||-
T Consensus 81 lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 81 LRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred HHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 4555655544433 4566899999988743 3444555556655554 68999999997
No 101
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=88.95 E-value=7.2 Score=37.64 Aligned_cols=48 Identities=19% Similarity=0.326 Sum_probs=29.2
Q ss_pred CceEEEeeeeeecCeEEec--CCeEEEEeccCCCCCCCCCceEEEEEc-CCCceEE
Q psy1403 311 MDLICRAHQVVEEGYEFFA--DKKLVTLFSAPNYCGEFDNAGAMMSVD-QNLMCSF 363 (384)
Q Consensus 311 l~~iIRgH~~~~~G~~~~~--~~~~iTvfSa~~y~~~~~n~ga~l~i~-~~~~~~~ 363 (384)
=++++.|||+.. |.+.+. +++-+.+.|.|.|.. .|.++.+| +++.+..
T Consensus 204 PhVyf~Gnq~~f-~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~ 254 (257)
T cd07387 204 PHVYFAGNQPKF-GTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEP 254 (257)
T ss_pred CCEEEeCCCcce-eeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEE
Confidence 456789999974 555443 256677788898743 45444443 3444443
No 102
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=88.74 E-value=0.61 Score=44.68 Aligned_cols=64 Identities=20% Similarity=0.180 Sum_probs=35.5
Q ss_pred eeEEecCCCCHHH----------------------HHHHHHhCCCC-CCCce-EeecceeccCCCc-----HHHHHHHHH
Q psy1403 129 LKICGDVHGQYTD----------------------LLRLFDHGKFP-PASNY-LFLGDYVDRGKQS-----LETICLLLA 179 (384)
Q Consensus 129 i~ViGDIHG~~~~----------------------L~~il~~~g~~-~~~~~-vfLGD~VDRG~~s-----~evl~ll~~ 179 (384)
|..++|+||++.. +..+++...-. ..+.+ +..||+++..+.+ ..++..+-.
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~ 82 (264)
T cd07411 3 LLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNA 82 (264)
T ss_pred EEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHh
Confidence 5667888887533 34455544322 23333 4599999876533 233444433
Q ss_pred HHHhcCCcEEEEcCCCcch
Q psy1403 180 YKIKHPETFFLLRGNHESA 198 (384)
Q Consensus 180 Lk~~~p~~v~lLrGNHE~~ 198 (384)
+ +-. .+. ||||..
T Consensus 83 ~----g~d-a~~-GNHefd 95 (264)
T cd07411 83 L----GVD-AMV-GHWEFT 95 (264)
T ss_pred h----CCe-EEe-cccccc
Confidence 3 222 334 999964
No 103
>KOG0918|consensus
Probab=86.36 E-value=0.019 Score=57.83 Aligned_cols=192 Identities=12% Similarity=-0.083 Sum_probs=113.8
Q ss_pred CceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHh----chHHHHHHHHHHccCC
Q psy1403 155 SNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECKRRY----NVKLWKTFTECFNCMP 230 (384)
Q Consensus 155 ~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~----~~~~~~~~~~~f~~LP 230 (384)
-..|+++++.+++.+.++.+.+-+..+..+..+.-..++||+.. +++++++.-.- ...+++..++-+..++
T Consensus 49 latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~-----~~~R~~LVlp~l~S~riyvid~~~ep~~~~l 123 (476)
T KOG0918|consen 49 LATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDS-----SFKRRYLVLPSLNSGRIYVIDVKTEPRKPSL 123 (476)
T ss_pred eeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCc-----chhhhheeecccccCceEEEEeccCcCccce
Confidence 45789999999999999999999999988988999999999543 22332221111 1234556677777788
Q ss_pred cEEEEcCcEEEecCCCCCCCCChhhhcCCCCCC--C--CCCcchHHHhhhcCCCCCCCCCCCCCCCcccccChhh--HHH
Q psy1403 231 VAAIVDEKIFCCHGGLSPDLDSFEDIKRIPRPT--D--VPDQGLLCDLLWSDPDNNILDWGDNDRGVSYTFGPNV--VKT 304 (384)
Q Consensus 231 l~a~i~~~il~vHgGisp~~~~l~~i~~i~r~~--~--~~~~~~~~dlLWsdp~~~~~~~~~~~rG~~~~fg~~~--~~~ 304 (384)
...+ +.++++.||+..|......++..+.-.. + -...+ ...|+-++-.. ...|... |....||.+. .-+
T Consensus 124 ~k~i-~~~il~~~~l~~Pht~hcla~g~v~vs~lGd~~gn~kg-~f~llD~~~~~-k~tw~~~--~~~p~~gyDfwyqpr 198 (476)
T KOG0918|consen 124 EKTI-DPDILEKTGLACPHTSHCLASGNVMVSCLGDAEGNAKG-GFLLLDSDFNE-KGTWEKP--GHSPLFGYDFWYQPR 198 (476)
T ss_pred eeee-chhhHhhcCCcCCcccccccCCCeeEEeecccccCCcC-CeEEecCccce-ecccccC--CCccccccceeeccc
Confidence 8755 4499999999999876544444322111 0 00111 11222222111 1234322 2233333322 122
Q ss_pred HHHhcCCceEEEeeeeeecCeEEecCCeEEEEeccCCCCCCCCCceEEEEEcCC
Q psy1403 305 FLDKHHMDLICRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMSVDQN 358 (384)
Q Consensus 305 fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~ 358 (384)
+....+.+...+.|.....+.....++ .+.++.+-|.-..++-++.+.++.+
T Consensus 199 ~~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~ 250 (476)
T KOG0918|consen 199 HNVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDT 250 (476)
T ss_pred cceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCC
Confidence 344445555666776654444445555 6777787777777788888887665
No 104
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=84.71 E-value=0.97 Score=52.51 Aligned_cols=66 Identities=20% Similarity=0.156 Sum_probs=39.6
Q ss_pred CeeEEecCCCCHH---HHHHHHHhCCCCCCCceEe-ecceeccCCCc-----HHHHHHHHHHHHhcCCcEEEEcCCCcch
Q psy1403 128 PLKICGDVHGQYT---DLLRLFDHGKFPPASNYLF-LGDYVDRGKQS-----LETICLLLAYKIKHPETFFLLRGNHESA 198 (384)
Q Consensus 128 ~i~ViGDIHG~~~---~L~~il~~~g~~~~~~~vf-LGD~VDRG~~s-----~evl~ll~~Lk~~~p~~v~lLrGNHE~~ 198 (384)
.|+.++|+||.+. .+..+++...-...+.+++ .||+++..+.+ ..++..+-.+. --+...||||..
T Consensus 662 ~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEfd 736 (1163)
T PRK09419 662 TILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEFD 736 (1163)
T ss_pred EEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEecccccc
Confidence 4788999999853 3444454433222233433 89999877543 23444443332 235699999973
No 105
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=84.42 E-value=3.7 Score=37.67 Aligned_cols=84 Identities=23% Similarity=0.282 Sum_probs=52.0
Q ss_pred CCCCCceEeeccee--ccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHHHHhchHHHHHHHHHHcc
Q psy1403 151 FPPASNYLFLGDYV--DRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECKRRYNVKLWKTFTECFNC 228 (384)
Q Consensus 151 ~~~~~~~vfLGD~V--DRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~ 228 (384)
..+++.++.-||+- -|-++..+=+.++-+| |..=+++|||||.+.-. ...+...+... ....++.|..
T Consensus 41 v~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw~s-----~skl~n~lp~~-l~~~n~~f~l 110 (230)
T COG1768 41 VSPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWWSS-----ISKLNNALPPI-LFYLNNGFEL 110 (230)
T ss_pred CChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCccccch-----HHHHHhhcCch-HhhhccceeE
Confidence 34566777889985 3555566666666544 88889999999998553 22333444333 3456677776
Q ss_pred CCcEEEEcCcEEEecCCCCCCC
Q psy1403 229 MPVAAIVDEKIFCCHGGLSPDL 250 (384)
Q Consensus 229 LPl~a~i~~~il~vHgGisp~~ 250 (384)
+-++ +++ +-|=++|..
T Consensus 111 ~n~a-I~G-----~RgW~s~~~ 126 (230)
T COG1768 111 LNYA-IVG-----VRGWDSPSF 126 (230)
T ss_pred eeEE-EEE-----eecccCCCC
Confidence 6644 545 444456643
No 106
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=83.77 E-value=1.7 Score=42.21 Aligned_cols=66 Identities=15% Similarity=0.115 Sum_probs=36.4
Q ss_pred CeeEEecCCCCH---------------------HHHHHHHHhCCCCCCC-ceEeecceeccCCCc-----HHHHHHHHHH
Q psy1403 128 PLKICGDVHGQY---------------------TDLLRLFDHGKFPPAS-NYLFLGDYVDRGKQS-----LETICLLLAY 180 (384)
Q Consensus 128 ~i~ViGDIHG~~---------------------~~L~~il~~~g~~~~~-~~vfLGD~VDRG~~s-----~evl~ll~~L 180 (384)
.|.-++|+||++ ..+..+++...-...+ -++..||+++..+.+ ...+..+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 366789999875 3344455544322223 344589999876532 3333433333
Q ss_pred HHhcCCcEEEEcCCCcch
Q psy1403 181 KIKHPETFFLLRGNHESA 198 (384)
Q Consensus 181 k~~~p~~v~lLrGNHE~~ 198 (384)
. . .+ +..||||.-
T Consensus 82 g---~-D~-~~lGNHefd 94 (281)
T cd07409 82 G---Y-DA-MTLGNHEFD 94 (281)
T ss_pred C---C-CE-EEecccccc
Confidence 2 2 33 445999974
No 107
>KOG2863|consensus
Probab=83.42 E-value=2.2 Score=42.88 Aligned_cols=74 Identities=23% Similarity=0.377 Sum_probs=48.1
Q ss_pred CCeeEEecCCCCHHHHHH---HHHhCCCCCCCceEeecceec-cCC---CcHHH---HHHHHH------HHHhcCCcEEE
Q psy1403 127 PPLKICGDVHGQYTDLLR---LFDHGKFPPASNYLFLGDYVD-RGK---QSLET---ICLLLA------YKIKHPETFFL 190 (384)
Q Consensus 127 ~~i~ViGDIHG~~~~L~~---il~~~g~~~~~~~vfLGD~VD-RG~---~s~ev---l~ll~~------Lk~~~p~~v~l 190 (384)
.+|.|-|=-||.++.+-+ ..++.|-.+.+-+++.||+=. |.. +++.| ...+-. =....|--.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 378999999999999874 445566667777889999864 322 22222 111111 11245666789
Q ss_pred EcCCCcchhh
Q psy1403 191 LRGNHESANI 200 (384)
Q Consensus 191 LrGNHE~~~~ 200 (384)
+=||||.++.
T Consensus 81 IGGNHEAsny 90 (456)
T KOG2863|consen 81 IGGNHEASNY 90 (456)
T ss_pred ecCchHHHHH
Confidence 9999999754
No 108
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=82.51 E-value=2.2 Score=39.12 Aligned_cols=72 Identities=10% Similarity=0.126 Sum_probs=40.7
Q ss_pred eeEEecCCCC-----HHHHHHHHHhCC-CCCCCceEeecceeccCCCcH----------HHHHHHHHHHHh-----cCCc
Q psy1403 129 LKICGDVHGQ-----YTDLLRLFDHGK-FPPASNYLFLGDYVDRGKQSL----------ETICLLLAYKIK-----HPET 187 (384)
Q Consensus 129 i~ViGDIHG~-----~~~L~~il~~~g-~~~~~~~vfLGD~VDRG~~s~----------evl~ll~~Lk~~-----~p~~ 187 (384)
|++++|+|=. ++.|.++|+... -...+.+|++|+++|.-.... .....+..+... .--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5677888765 666778887776 555577999999999632211 111122222211 2247
Q ss_pred EEEEcCCCcchhh
Q psy1403 188 FFLLRGNHESANI 200 (384)
Q Consensus 188 v~lLrGNHE~~~~ 200 (384)
|+++.|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998755
No 109
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=82.10 E-value=2 Score=41.02 Aligned_cols=56 Identities=21% Similarity=0.163 Sum_probs=34.7
Q ss_pred CCHHHHHHHHHhCCCCCCC-ceEeecceeccCCC-----cHHHHHHHHHHHHhcCCcEEEEcCCCcc
Q psy1403 137 GQYTDLLRLFDHGKFPPAS-NYLFLGDYVDRGKQ-----SLETICLLLAYKIKHPETFFLLRGNHES 197 (384)
Q Consensus 137 G~~~~L~~il~~~g~~~~~-~~vfLGD~VDRG~~-----s~evl~ll~~Lk~~~p~~v~lLrGNHE~ 197 (384)
|.+.-+..+++...-...+ -++..||+++.++. ...++..+-.+. --+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 4466677777765433333 45579999987642 234555554443 13567899996
No 110
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=81.65 E-value=2.2 Score=41.45 Aligned_cols=66 Identities=18% Similarity=0.165 Sum_probs=46.7
Q ss_pred CeeEEecCCCC--HHHHHHHHHhCCCCCC-CceEeecceeccC-CCcHHHHHHHHHHHHhcCCcEEEEcCCCcch
Q psy1403 128 PLKICGDVHGQ--YTDLLRLFDHGKFPPA-SNYLFLGDYVDRG-KQSLETICLLLAYKIKHPETFFLLRGNHESA 198 (384)
Q Consensus 128 ~i~ViGDIHG~--~~~L~~il~~~g~~~~-~~~vfLGD~VDRG-~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~ 198 (384)
+|.++|||=|. ...+...|..+..... +-++..||...-| .-+-++...|..+- -.++.+ |||+.-
T Consensus 2 ~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~G----vDviT~-GNH~~D 71 (266)
T TIGR00282 2 KFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSG----VNYITM-GNHTWF 71 (266)
T ss_pred eEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcC----CCEEEc-cchhcc
Confidence 68999999999 5667777766554433 4455589999766 45677788777654 356666 999875
No 111
>KOG3339|consensus
Probab=78.42 E-value=22 Score=32.79 Aligned_cols=85 Identities=15% Similarity=0.266 Sum_probs=64.9
Q ss_pred CceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcch----------------HHHHHHhchHH
Q psy1403 155 SNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFY----------------DECKRRYNVKL 218 (384)
Q Consensus 155 ~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~----------------~e~~~~~~~~~ 218 (384)
..+||+| .|-+.-|.+.++-.|+.+|-.+.+. .|+-|.|..++...|. .|....|-..+
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 4588887 5889999999999999998887665 8999999887655443 23333344567
Q ss_pred HHHHHHHHccCCcEEEEcCcEEEecC
Q psy1403 219 WKTFTECFNCMPVAAIVDEKIFCCHG 244 (384)
Q Consensus 219 ~~~~~~~f~~LPl~a~i~~~il~vHg 244 (384)
|..+...+.++++...+-..++.+-|
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECC
Confidence 77888888888888888777777777
No 112
>KOG2476|consensus
Probab=77.90 E-value=3.8 Score=42.48 Aligned_cols=69 Identities=22% Similarity=0.421 Sum_probs=53.2
Q ss_pred CCCeeEEecCCCCHHHHHHHHHhCCC--CCCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCC
Q psy1403 126 EPPLKICGDVHGQYTDLLRLFDHGKF--PPASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNH 195 (384)
Q Consensus 126 ~~~i~ViGDIHG~~~~L~~il~~~g~--~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNH 195 (384)
+.+|.|+||+-|+++.|.+-.+.+.- .|-+-++++|++.+-..++.|++.+...-+ ..|-.++++=+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 47899999999999999877765443 245778899999997777888877765543 5677788887765
No 113
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=77.25 E-value=1.5 Score=45.44 Aligned_cols=41 Identities=24% Similarity=0.387 Sum_probs=34.8
Q ss_pred CceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhh
Q psy1403 155 SNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANI 200 (384)
Q Consensus 155 ~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~ 200 (384)
+++-.+||+-||||++-.+++.|..+. .+-+-.||||-..+
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWm 232 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWM 232 (648)
T ss_pred hheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEe
Confidence 567789999999999999999997664 57788999998655
No 114
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=75.80 E-value=4.8 Score=38.74 Aligned_cols=66 Identities=17% Similarity=0.150 Sum_probs=43.1
Q ss_pred CeeEEecCCCCHH--HHHHHHHhCCCCCC-CceEeecceeccC-CCcHHHHHHHHHHHHhcCCcEEEEcCCCcch
Q psy1403 128 PLKICGDVHGQYT--DLLRLFDHGKFPPA-SNYLFLGDYVDRG-KQSLETICLLLAYKIKHPETFFLLRGNHESA 198 (384)
Q Consensus 128 ~i~ViGDIHG~~~--~L~~il~~~g~~~~-~~~vfLGD~VDRG-~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~ 198 (384)
+|.++|||=|..- .+...|....-... +-++-.||..--| .-+-++...|..+.. .+..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-cccccC
Confidence 5789999999853 34555554433222 3344589998766 367788887776653 44554 999865
No 115
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=74.90 E-value=3.1 Score=43.86 Aligned_cols=68 Identities=24% Similarity=0.239 Sum_probs=42.0
Q ss_pred CCeeEEecCCCCHH------------HHHHH---HHhCCCCCCCceE-eecceeccCC------CcHHHHHHHHHHHHhc
Q psy1403 127 PPLKICGDVHGQYT------------DLLRL---FDHGKFPPASNYL-FLGDYVDRGK------QSLETICLLLAYKIKH 184 (384)
Q Consensus 127 ~~i~ViGDIHG~~~------------~L~~i---l~~~g~~~~~~~v-fLGD~VDRG~------~s~evl~ll~~Lk~~~ 184 (384)
-.|.-..|+||++. .+.++ +++..-.....++ =.||+++..+ .....+.++-.++.
T Consensus 27 l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~y-- 104 (517)
T COG0737 27 LTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGY-- 104 (517)
T ss_pred EEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCC--
Confidence 45788899999998 33333 2222222223333 4999999833 33456666666652
Q ss_pred CCcEEEEcCCCcchh
Q psy1403 185 PETFFLLRGNHESAN 199 (384)
Q Consensus 185 p~~v~lLrGNHE~~~ 199 (384)
=..-.||||.-.
T Consensus 105 ---Da~tiGNHEFd~ 116 (517)
T COG0737 105 ---DAMTLGNHEFDY 116 (517)
T ss_pred ---cEEeeccccccc
Confidence 357889999853
No 116
>KOG1432|consensus
Probab=74.71 E-value=6.3 Score=39.55 Aligned_cols=48 Identities=17% Similarity=0.212 Sum_probs=31.9
Q ss_pred CCCCceEeecceeccCCC---cHHHHHHHHHHHHhcCCcEEEEcCCCcchhh
Q psy1403 152 PPASNYLFLGDYVDRGKQ---SLETICLLLAYKIKHPETFFLLRGNHESANI 200 (384)
Q Consensus 152 ~~~~~~vfLGD~VDRG~~---s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~ 200 (384)
...+-+||+||.|+. .. ...++.-.++=.+.+.-....+.||||....
T Consensus 99 E~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes~ 149 (379)
T KOG1432|consen 99 EKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDESD 149 (379)
T ss_pred cCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEecccccccc
Confidence 445678899999986 32 3334444444444555568999999998644
No 117
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=72.08 E-value=4.1 Score=39.70 Aligned_cols=66 Identities=20% Similarity=0.094 Sum_probs=36.5
Q ss_pred CeeEEecCCCCHHH-------------HHHHHHhC----CC-CCCCceEeecceeccCCCc-------HHHHHHHHHHHH
Q psy1403 128 PLKICGDVHGQYTD-------------LLRLFDHG----KF-PPASNYLFLGDYVDRGKQS-------LETICLLLAYKI 182 (384)
Q Consensus 128 ~i~ViGDIHG~~~~-------------L~~il~~~----g~-~~~~~~vfLGD~VDRG~~s-------~evl~ll~~Lk~ 182 (384)
.|.-+.|+||++.. +.++.+.. .- .++.-++..||.+..-+.+ .-.+.++-.+.
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg- 85 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP- 85 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC-
Confidence 47788999998641 22222221 11 1222344599999754322 22344444333
Q ss_pred hcCCcEEEEcCCCcch
Q psy1403 183 KHPETFFLLRGNHESA 198 (384)
Q Consensus 183 ~~p~~v~lLrGNHE~~ 198 (384)
-=.+..||||.-
T Consensus 86 ----yDa~tlGNHEFd 97 (282)
T cd07407 86 ----YDLLTIGNHELY 97 (282)
T ss_pred ----CcEEeecccccC
Confidence 236889999994
No 118
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=70.26 E-value=4.6 Score=39.27 Aligned_cols=65 Identities=18% Similarity=0.055 Sum_probs=34.8
Q ss_pred eeEEecCCCCHHH----------HHHHHHhCCC-----CCCCceEeecceeccCCC-----cHHHHHHHHHHHHhcCCcE
Q psy1403 129 LKICGDVHGQYTD----------LLRLFDHGKF-----PPASNYLFLGDYVDRGKQ-----SLETICLLLAYKIKHPETF 188 (384)
Q Consensus 129 i~ViGDIHG~~~~----------L~~il~~~g~-----~~~~~~vfLGD~VDRG~~-----s~evl~ll~~Lk~~~p~~v 188 (384)
|.-+.|+||++.. +..+++...- .++.-++-.||.+...+. ...++.++-.+.. .+
T Consensus 3 Il~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~----Da 78 (285)
T cd07405 3 ILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY----DA 78 (285)
T ss_pred EEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCC----cE
Confidence 6778999998533 3344443321 223334459999843221 2233444444432 33
Q ss_pred EEEcCCCcch
Q psy1403 189 FLLRGNHESA 198 (384)
Q Consensus 189 ~lLrGNHE~~ 198 (384)
...||||.-
T Consensus 79 -~~~GNHEfD 87 (285)
T cd07405 79 -MAVGNHEFD 87 (285)
T ss_pred -Eeecccccc
Confidence 445999964
No 119
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=67.69 E-value=7.7 Score=39.77 Aligned_cols=71 Identities=11% Similarity=0.061 Sum_probs=38.8
Q ss_pred CeeEEecCCCCHHHHH---HHHHhC-CCCCCCceEeecceeccCCCcHH------HHHHHHHHHH-hcCCcEEEEcCCCc
Q psy1403 128 PLKICGDVHGQYTDLL---RLFDHG-KFPPASNYLFLGDYVDRGKQSLE------TICLLLAYKI-KHPETFFLLRGNHE 196 (384)
Q Consensus 128 ~i~ViGDIHG~~~~L~---~il~~~-g~~~~~~~vfLGD~VDRG~~s~e------vl~ll~~Lk~-~~p~~v~lLrGNHE 196 (384)
+++++||-=+-..+-. +.+... .-.+.+-+|-+||-++.|..++. .++-++.-.. .-.-.+++++||||
T Consensus 28 ~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNHD 107 (394)
T PTZ00422 28 RFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQAD 107 (394)
T ss_pred EEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCccc
Confidence 5899999533222211 122222 22334556679999988876543 3333332111 01126899999999
Q ss_pred ch
Q psy1403 197 SA 198 (384)
Q Consensus 197 ~~ 198 (384)
.+
T Consensus 108 y~ 109 (394)
T PTZ00422 108 WD 109 (394)
T ss_pred cc
Confidence 74
No 120
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=66.70 E-value=6 Score=43.22 Aligned_cols=68 Identities=16% Similarity=0.078 Sum_probs=40.8
Q ss_pred CCCeeEEecCCCCHHH----------------HHHHHHhCCCC-CCCceEeecceeccCCCcH-------------HHHH
Q psy1403 126 EPPLKICGDVHGQYTD----------------LLRLFDHGKFP-PASNYLFLGDYVDRGKQSL-------------ETIC 175 (384)
Q Consensus 126 ~~~i~ViGDIHG~~~~----------------L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~-------------evl~ 175 (384)
+-+|.-..|+||++.. +..+++...-. ++.-+|-.||.+...+.+- -++.
T Consensus 25 ~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i~ 104 (649)
T PRK09420 25 DLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVYK 104 (649)
T ss_pred eEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHHH
Confidence 4568889999999743 23334433221 2334556999997655321 2455
Q ss_pred HHHHHHHhcCCcEEEEcCCCcch
Q psy1403 176 LLLAYKIKHPETFFLLRGNHESA 198 (384)
Q Consensus 176 ll~~Lk~~~p~~v~lLrGNHE~~ 198 (384)
.+-.|. -=....||||.-
T Consensus 105 amN~lg-----yDa~tlGNHEFd 122 (649)
T PRK09420 105 AMNTLD-----YDVGNLGNHEFN 122 (649)
T ss_pred HHHhcC-----CcEEeccchhhh
Confidence 555444 236789999964
No 121
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=66.30 E-value=7.7 Score=38.40 Aligned_cols=65 Identities=23% Similarity=0.112 Sum_probs=38.2
Q ss_pred eeEEecCCCCHH------HHHHHHHhCCC-----CCCCceEeecceeccCCC-------------cHHHHHHHHHHHHhc
Q psy1403 129 LKICGDVHGQYT------DLLRLFDHGKF-----PPASNYLFLGDYVDRGKQ-------------SLETICLLLAYKIKH 184 (384)
Q Consensus 129 i~ViGDIHG~~~------~L~~il~~~g~-----~~~~~~vfLGD~VDRG~~-------------s~evl~ll~~Lk~~~ 184 (384)
|.-+.|+||++. .+..+++...- .++.-++.-||.+.-++. ...++.++-.+..
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~-- 80 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGV-- 80 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCC--
Confidence 566789999953 33333443221 233345569999875442 3344555545542
Q ss_pred CCcEEEEcCCCcch
Q psy1403 185 PETFFLLRGNHESA 198 (384)
Q Consensus 185 p~~v~lLrGNHE~~ 198 (384)
=.+..||||.-
T Consensus 81 ---Da~tlGNHEFD 91 (313)
T cd08162 81 ---QAIALGNHEFD 91 (313)
T ss_pred ---cEEeccccccc
Confidence 35789999963
No 122
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=65.61 E-value=6.3 Score=45.95 Aligned_cols=67 Identities=21% Similarity=0.209 Sum_probs=38.4
Q ss_pred CCeeEEecCCCCHHH----------------HHHHHHhCCCCCCCceEe-ecceeccCCC--------------cHHHHH
Q psy1403 127 PPLKICGDVHGQYTD----------------LLRLFDHGKFPPASNYLF-LGDYVDRGKQ--------------SLETIC 175 (384)
Q Consensus 127 ~~i~ViGDIHG~~~~----------------L~~il~~~g~~~~~~~vf-LGD~VDRG~~--------------s~evl~ 175 (384)
-+|.-.+|+||++.. +..+++...-.....+++ .||.+...+- ...++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 358889999998643 233444332222233444 9999986541 123444
Q ss_pred HHHHHHHhcCCcEEEEcCCCcch
Q psy1403 176 LLLAYKIKHPETFFLLRGNHESA 198 (384)
Q Consensus 176 ll~~Lk~~~p~~v~lLrGNHE~~ 198 (384)
.+-.+. -=....||||.-
T Consensus 122 ~mN~lg-----yDa~~lGNHEFd 139 (1163)
T PRK09419 122 AMNALG-----YDAGTLGNHEFN 139 (1163)
T ss_pred HHhhcC-----ccEEeecccccc
Confidence 443333 235679999973
No 123
>KOG3947|consensus
Probab=65.18 E-value=10 Score=36.93 Aligned_cols=67 Identities=21% Similarity=0.196 Sum_probs=42.1
Q ss_pred CCeeEEecCCCCHHHHHHHHHhCCCCCCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhh
Q psy1403 127 PPLKICGDVHGQYTDLLRLFDHGKFPPASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANI 200 (384)
Q Consensus 127 ~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~ 200 (384)
.+++.++|.|+...+.. ..|+.+-++-+||+-.-|. +-||+.+=-.+-.+--+.=+.|+||||...-
T Consensus 62 ~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~gslph~yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 62 ARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLGSLPHEYKIVIAGNHELTFD 128 (305)
T ss_pred eEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhccCcceeeEEEeeccceeec
Confidence 36899999999665543 2455666788999987664 4455443222211111235789999998643
No 124
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=64.99 E-value=6.7 Score=42.64 Aligned_cols=66 Identities=18% Similarity=0.096 Sum_probs=38.5
Q ss_pred CeeEEecCCCCHHH----------------HHHHHHhCCCC-CCCceEeecceeccCCCc-------------HHHHHHH
Q psy1403 128 PLKICGDVHGQYTD----------------LLRLFDHGKFP-PASNYLFLGDYVDRGKQS-------------LETICLL 177 (384)
Q Consensus 128 ~i~ViGDIHG~~~~----------------L~~il~~~g~~-~~~~~vfLGD~VDRG~~s-------------~evl~ll 177 (384)
+|.-..|+||++.. +..++++..-. ++.-+|-.||.+...+.+ .-++.++
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~m 83 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKAM 83 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHHH
Confidence 47778999999753 23344433221 233355699999854432 2344555
Q ss_pred HHHHHhcCCcEEEEcCCCcch
Q psy1403 178 LAYKIKHPETFFLLRGNHESA 198 (384)
Q Consensus 178 ~~Lk~~~p~~v~lLrGNHE~~ 198 (384)
-.|. -=....||||.-
T Consensus 84 N~lg-----yDa~tlGNHEFd 99 (626)
T TIGR01390 84 NLLK-----YDVGNLGNHEFN 99 (626)
T ss_pred hhcC-----ccEEeccccccc
Confidence 4443 235789999964
No 125
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=64.21 E-value=21 Score=35.12 Aligned_cols=73 Identities=15% Similarity=0.222 Sum_probs=48.1
Q ss_pred CCeeEEecCCCC----HHHHHHHHHhCC-CCC----CCceEeecceeccC----CCc----HHHHHHHHHH-HHhcC---
Q psy1403 127 PPLKICGDVHGQ----YTDLLRLFDHGK-FPP----ASNYLFLGDYVDRG----KQS----LETICLLLAY-KIKHP--- 185 (384)
Q Consensus 127 ~~i~ViGDIHG~----~~~L~~il~~~g-~~~----~~~~vfLGD~VDRG----~~s----~evl~ll~~L-k~~~p--- 185 (384)
..++|+||+|=+ ++.|.++|+... ..+ ..-+||+|+++-+. ..+ .+-++-|..+ ...||
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 458999999954 778888888662 212 34588999999763 222 2334444432 22344
Q ss_pred --CcEEEEcCCCcchh
Q psy1403 186 --ETFFLLRGNHESAN 199 (384)
Q Consensus 186 --~~v~lLrGNHE~~~ 199 (384)
.++++++|-.|-+.
T Consensus 108 ~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 108 EHCYLIFIPGINDPCA 123 (291)
T ss_pred hcCeEEEECCCCCCCc
Confidence 58999999999753
No 126
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=57.80 E-value=12 Score=39.78 Aligned_cols=66 Identities=20% Similarity=0.074 Sum_probs=35.3
Q ss_pred CeeEEecCCCCHHH----------HHHHHHhCC-----CCCCCceEeecceeccCCCc-----HHHHHHHHHHHHhcCCc
Q psy1403 128 PLKICGDVHGQYTD----------LLRLFDHGK-----FPPASNYLFLGDYVDRGKQS-----LETICLLLAYKIKHPET 187 (384)
Q Consensus 128 ~i~ViGDIHG~~~~----------L~~il~~~g-----~~~~~~~vfLGD~VDRG~~s-----~evl~ll~~Lk~~~p~~ 187 (384)
.|.-+.|+||++.. +..+++... -.++.-++.-||.+...+.+ .-++.++-.+. -.
T Consensus 36 til~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g----~D 111 (551)
T PRK09558 36 TILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIG----YD 111 (551)
T ss_pred EEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCC----CC
Confidence 47888999998742 223333322 12333455689998633221 22334443332 23
Q ss_pred EEEEcCCCcch
Q psy1403 188 FFLLRGNHESA 198 (384)
Q Consensus 188 v~lLrGNHE~~ 198 (384)
+ ...||||.-
T Consensus 112 a-~tlGNHEFD 121 (551)
T PRK09558 112 A-MAVGNHEFD 121 (551)
T ss_pred E-EcccccccC
Confidence 4 445999974
No 127
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=53.73 E-value=14 Score=41.41 Aligned_cols=67 Identities=19% Similarity=0.100 Sum_probs=39.1
Q ss_pred CCeeEEecCCCCHHHH----------------HHHHHhCCCC-CCCceEeecceeccCCCc--------------HHHHH
Q psy1403 127 PPLKICGDVHGQYTDL----------------LRLFDHGKFP-PASNYLFLGDYVDRGKQS--------------LETIC 175 (384)
Q Consensus 127 ~~i~ViGDIHG~~~~L----------------~~il~~~g~~-~~~~~vfLGD~VDRG~~s--------------~evl~ 175 (384)
-+|.-..|+||++... ..+++...-. ++.-+|-.||.+..-+.+ .-++.
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 3578899999996432 2233332211 233455699999754322 12555
Q ss_pred HHHHHHHhcCCcEEEEcCCCcch
Q psy1403 176 LLLAYKIKHPETFFLLRGNHESA 198 (384)
Q Consensus 176 ll~~Lk~~~p~~v~lLrGNHE~~ 198 (384)
.+-.|. -=....||||.-
T Consensus 196 amN~LG-----yDA~tLGNHEFD 213 (814)
T PRK11907 196 ALEALG-----FDAGTLGNHEFN 213 (814)
T ss_pred HHhccC-----CCEEEechhhcc
Confidence 555554 236789999964
No 128
>KOG2310|consensus
Probab=52.13 E-value=38 Score=36.16 Aligned_cols=54 Identities=17% Similarity=0.193 Sum_probs=39.5
Q ss_pred CCeeEEecCCC------------CHHHHHHHHHhCCCCCCCceEeecceeccCCCcHHHHHHHHHH
Q psy1403 127 PPLKICGDVHG------------QYTDLLRLFDHGKFPPASNYLFLGDYVDRGKQSLETICLLLAY 180 (384)
Q Consensus 127 ~~i~ViGDIHG------------~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~L 180 (384)
-+|.|-.|+|= .+..|.++|..+.-...+-++.-||++.-..-|.++|.-.+.+
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~l 79 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLEL 79 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHH
Confidence 36888899883 3678888988776656666778999998877777765554443
No 129
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=52.08 E-value=19 Score=38.45 Aligned_cols=40 Identities=25% Similarity=0.129 Sum_probs=23.8
Q ss_pred CCceEeecceeccCCCc-----HHHHHHHHHHHHhcCCcEEEEcCCCcch
Q psy1403 154 ASNYLFLGDYVDRGKQS-----LETICLLLAYKIKHPETFFLLRGNHESA 198 (384)
Q Consensus 154 ~~~~vfLGD~VDRG~~s-----~evl~ll~~Lk~~~p~~v~lLrGNHE~~ 198 (384)
+.-++.-||.+...+.+ ...+.++-.+. --....||||.-
T Consensus 50 n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g-----~Da~~lGNHEFd 94 (550)
T TIGR01530 50 NALVLHAGDAIIGTLYFTLFGGRADAALMNAAG-----FDFFTLGNHEFD 94 (550)
T ss_pred CeEEEECCCCCCCccchhhcCCHHHHHHHhccC-----CCEEEecccccc
Confidence 34455799998754322 22344443333 246889999974
No 130
>KOG2679|consensus
Probab=51.41 E-value=14 Score=36.10 Aligned_cols=91 Identities=18% Similarity=0.232 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhCCCeeeeCCC-----eeEEec--CCCCHHHHHHHHHhCCCCCC---CceEeeccee-ccCCCcHHHHHH
Q psy1403 108 LIQISRKIFMSQPMLLELEPP-----LKICGD--VHGQYTDLLRLFDHGKFPPA---SNYLFLGDYV-DRGKQSLETICL 176 (384)
Q Consensus 108 l~~~a~~il~~ep~ll~i~~~-----i~ViGD--IHG~~~~L~~il~~~g~~~~---~~~vfLGD~V-DRG~~s~evl~l 176 (384)
++..+......-|.+.+...+ +.|||| .+|.+..-+-.+........ +-+|-+||-+ |-|..+.-==.+
T Consensus 20 ~I~~~~~s~~eLp~l~~p~~~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~F 99 (336)
T KOG2679|consen 20 FILSAISSTAELPRLYDPAKSDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRF 99 (336)
T ss_pred HHhhccchhhhhhhhcCCCCCCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhH
Q ss_pred HHHHHHhcCC-----cEEEEcCCCcch
Q psy1403 177 LLAYKIKHPE-----TFFLLRGNHESA 198 (384)
Q Consensus 177 l~~Lk~~~p~-----~v~lLrGNHE~~ 198 (384)
=....--|-. ..+.+.||||.+
T Consensus 100 q~sF~nIYT~pSLQkpWy~vlGNHDyr 126 (336)
T KOG2679|consen 100 QDSFENIYTAPSLQKPWYSVLGNHDYR 126 (336)
T ss_pred HhhhhhcccCcccccchhhhccCcccc
No 131
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=40.98 E-value=1.2e+02 Score=27.01 Aligned_cols=102 Identities=17% Similarity=0.241 Sum_probs=60.3
Q ss_pred eEEecCCCCHHHHHHHHH-hCCC------------CCCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCc
Q psy1403 130 KICGDVHGQYTDLLRLFD-HGKF------------PPASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHE 196 (384)
Q Consensus 130 ~ViGDIHG~~~~L~~il~-~~g~------------~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE 196 (384)
++.+-.+||-..+.+.+. .++- ...-++||+|-.+|+|.-+-++..+|-.|+ +.+|++.-
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~lF~---- 74 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVALFG---- 74 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEEEE----
Confidence 455666777766654432 2222 233579999999999999999999998875 45555421
Q ss_pred chhhhhhhcchHHHHHHhchHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCC
Q psy1403 197 SANINRIYGFYDECKRRYNVKLWKTFTECFNCMPVAAIVDEKIFCCHGGLSPDL 250 (384)
Q Consensus 197 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~a~i~~~il~vHgGisp~~ 250 (384)
..|+.. ...|...+.+....++..= ..+- ..|+|+|-++|.+
T Consensus 75 ------T~G~~~--~s~~~~~~~~~~~~~~~~~---~~~l-g~f~CqGk~~~~~ 116 (160)
T PF12641_consen 75 ------TAGAGP--DSEYAKKILKNVEALLPKG---NEIL-GTFMCQGKMDPKV 116 (160)
T ss_pred ------ecCCCC--chHHHHHHHHHHHHhhccC---Ceec-ceEEeCCcCCHHH
Confidence 123221 1223333444445554432 1222 3677899998763
No 132
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=37.59 E-value=33 Score=38.39 Aligned_cols=67 Identities=18% Similarity=0.115 Sum_probs=38.2
Q ss_pred CCCeeEEecCCCCHHH----------------HHHHHHhCCCC-CCCceEeecceeccCCC-------------------
Q psy1403 126 EPPLKICGDVHGQYTD----------------LLRLFDHGKFP-PASNYLFLGDYVDRGKQ------------------- 169 (384)
Q Consensus 126 ~~~i~ViGDIHG~~~~----------------L~~il~~~g~~-~~~~~vfLGD~VDRG~~------------------- 169 (384)
.-+|.-..|+||++.. +..++++..-. ++.-+|-.||++-.-+.
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 3468889999999643 22233332211 23345569998843221
Q ss_pred cHHHHHHHHHHHHhcCCcEEEEcCCCcc
Q psy1403 170 SLETICLLLAYKIKHPETFFLLRGNHES 197 (384)
Q Consensus 170 s~evl~ll~~Lk~~~p~~v~lLrGNHE~ 197 (384)
..-++.++-.|.. =....||||.
T Consensus 119 ~~p~i~~mN~lgy-----Da~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMKY-----DVISLGNHEF 141 (780)
T ss_pred chHHHHHHhccCC-----CEEecccccc
Confidence 1235555544442 3578999995
No 133
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=36.20 E-value=92 Score=24.28 Aligned_cols=70 Identities=13% Similarity=0.110 Sum_probs=46.7
Q ss_pred CCCeeEEecCCCCHHHHHHHHHhCC--CCCCCceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCC
Q psy1403 126 EPPLKICGDVHGQYTDLLRLFDHGK--FPPASNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNH 195 (384)
Q Consensus 126 ~~~i~ViGDIHG~~~~L~~il~~~g--~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNH 195 (384)
...+.|+=|---|.+.+..+++.+. ++....++.+|+.-|+|..+.+....+-.+...+...+++...|+
T Consensus 11 ~~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 11 PNGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp ETTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 3457788887777888888777653 234455678999999888888766677666666666666655554
No 134
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=33.95 E-value=39 Score=36.62 Aligned_cols=42 Identities=24% Similarity=0.399 Sum_probs=35.8
Q ss_pred CceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhh
Q psy1403 155 SNYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANIN 201 (384)
Q Consensus 155 ~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~ 201 (384)
+++-.+||+.||||.+-.+++.|+... +|=+-.||||-..|.
T Consensus 186 DhLHIvGDIyDRGp~pd~ImD~Lm~~h-----svDIQWGNHDIlWMG 227 (640)
T PF06874_consen 186 DHLHIVGDIYDRGPRPDKIMDRLMNYH-----SVDIQWGNHDILWMG 227 (640)
T ss_pred hheeecccccCCCCChhHHHHHHhcCC-----CccccccchHHHHHH
Confidence 456789999999999999999998653 688999999987663
No 135
>KOG1378|consensus
Probab=31.68 E-value=79 Score=33.03 Aligned_cols=67 Identities=22% Similarity=0.155 Sum_probs=0.0
Q ss_pred CCCeeEEecCCCCHHH--HHHHHHhCCCCCCCceEeeccee--ccCC--CcHHHHHHHHHHHHhcCCcEEEEcCCCc
Q psy1403 126 EPPLKICGDVHGQYTD--LLRLFDHGKFPPASNYLFLGDYV--DRGK--QSLETICLLLAYKIKHPETFFLLRGNHE 196 (384)
Q Consensus 126 ~~~i~ViGDIHG~~~~--L~~il~~~g~~~~~~~vfLGD~V--DRG~--~s~evl~ll~~Lk~~~p~~v~lLrGNHE 196 (384)
..+++|+||+==.... .+...+... ..+-++++||+. +..+ ..-+-...+..+...-| ..+.-||||
T Consensus 147 ~~~~~i~GDlG~~~~~~s~~~~~~~~~--k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vP--ymv~~GNHE 219 (452)
T KOG1378|consen 147 PTRAAIFGDMGCTEPYTSTLRNQEENL--KPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVP--YMVCSGNHE 219 (452)
T ss_pred ceeEEEEccccccccccchHhHHhccc--CCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCc--eEEeccccc
No 136
>PF14164 YqzH: YqzH-like protein
Probab=30.58 E-value=1.8e+02 Score=22.06 Aligned_cols=45 Identities=13% Similarity=0.083 Sum_probs=31.5
Q ss_pred hhhHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCC
Q psy1403 76 DPDLDLIIQKLLDLRGTRQRRNVRLEEKEIVSLIQISRKIFMSQPM 121 (384)
Q Consensus 76 ~~~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ 121 (384)
...++.+|.+-+... +......+|+..|...|+....+.-.++|.
T Consensus 3 ek~I~Kmi~~~l~QY-g~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 3 EKLIEKMIINCLRQY-GYDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred HHHHHHHHHHHHHHh-CCcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 334566665555443 223344579999999999999999988886
No 137
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=29.43 E-value=18 Score=32.19 Aligned_cols=46 Identities=22% Similarity=0.361 Sum_probs=29.2
Q ss_pred cChhhHHHHHHhcC---------CceEEEeeeeeecCeEEecCCeEEEEeccCCCCCCCCC
Q psy1403 297 FGPNVVKTFLDKHH---------MDLICRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDN 348 (384)
Q Consensus 297 fg~~~~~~fl~~~~---------l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n 348 (384)
-+++..+.||.+-| ...-|||+-.+++.+.+-.+ +.+|.||.+++.
T Consensus 22 ~~p~~~~~fC~kCG~~tI~~Cp~C~~~IrG~y~v~gv~~~g~~------~~~PsYC~~CGk 76 (158)
T PF10083_consen 22 KNPELREKFCSKCGAKTITSCPNCSTPIRGDYHVEGVFGLGGH------YEAPSYCHNCGK 76 (158)
T ss_pred cCchHHHHHHHHhhHHHHHHCcCCCCCCCCceecCCeeeeCCC------CCCChhHHhCCC
Confidence 34455667777764 55568999877544433222 569999986553
No 138
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=28.81 E-value=43 Score=29.05 Aligned_cols=85 Identities=22% Similarity=0.375 Sum_probs=46.1
Q ss_pred cCCCCHHHHHHHHHhCCCCCCCce--EeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcCCCcchhhhhhhcchHHHH
Q psy1403 134 DVHGQYTDLLRLFDHGKFPPASNY--LFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRGNHESANINRIYGFYDECK 211 (384)
Q Consensus 134 DIHG~~~~L~~il~~~g~~~~~~~--vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~ 211 (384)
|+.|++..|++.|..+++|..-++ +-.|| +...+.++.-.-..|+..|.-.. +...|..+..-.
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~~vd~~~l~~G~-------p~afLpil~~~L~~yS~~va~~l-------~~~g~eL~~k~D 66 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPDEVDYQGLYKGD-------PSAFLPILHYALLSYSTHVARLL-------VDRGYELYGKND 66 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCCccCHHHHhcCC-------HHHHHHHHHHHHHcCCHHHHHHH-------HHcCchhhcCCh
Confidence 899999999999999999944322 23343 22223333222223443221111 111122222233
Q ss_pred HHhchHHHHHHHHHHccCCcE
Q psy1403 212 RRYNVKLWKTFTECFNCMPVA 232 (384)
Q Consensus 212 ~~~~~~~~~~~~~~f~~LPl~ 232 (384)
.++-+.+|+.+.+.|.+-|..
T Consensus 67 ~RF~E~vyk~LRdef~YkP~l 87 (131)
T PF15007_consen 67 LRFVESVYKLLRDEFNYKPSL 87 (131)
T ss_pred HHHHHHHHHHHHHHhCCCCCC
Confidence 455567788888888887754
No 139
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=27.07 E-value=1e+02 Score=28.81 Aligned_cols=37 Identities=24% Similarity=0.337 Sum_probs=27.5
Q ss_pred HHHHhcCCceEEEeeeeeecCeEEecCCeEEEEeccCCC
Q psy1403 304 TFLDKHHMDLICRAHQVVEEGYEFFADKKLVTLFSAPNY 342 (384)
Q Consensus 304 ~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y 342 (384)
+.+-..|+++||-||..+..+++.. ++++| +||-=|+
T Consensus 199 ~~l~~~G~DvIiG~H~H~~~~~e~~-~~~~I-~YslGNf 235 (239)
T smart00854 199 HALIDAGADVVIGHHPHVLQPIEIY-KGKLI-AYSLGNF 235 (239)
T ss_pred HHHHHcCCCEEEcCCCCcCCceEEE-CCEEE-EEccccc
Confidence 3333469999999999999999876 55666 6776554
No 140
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=25.10 E-value=1.2e+02 Score=28.64 Aligned_cols=40 Identities=23% Similarity=0.303 Sum_probs=29.4
Q ss_pred HHHHHHhcCCceEEEeeeeeecCeEEecCCeEEEEeccCCCC
Q psy1403 302 VKTFLDKHHMDLICRAHQVVEEGYEFFADKKLVTLFSAPNYC 343 (384)
Q Consensus 302 ~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~ 343 (384)
+.+.|-..|+++||-+|..+..|++++ ++++| +||-=|+.
T Consensus 208 ~a~~lidaGaDiIiG~HpHv~q~~E~y-~~~~I-~YSLGNfi 247 (250)
T PF09587_consen 208 LARALIDAGADIIIGHHPHVIQPVEIY-KGKPI-FYSLGNFI 247 (250)
T ss_pred HHHHHHHcCCCEEEeCCCCcccceEEE-CCEEE-EEeCcccc
Confidence 334444479999999999999999987 55554 57765553
No 141
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=24.90 E-value=88 Score=30.07 Aligned_cols=59 Identities=20% Similarity=0.298 Sum_probs=33.4
Q ss_pred cCCcEEEEcCCCcchhhhhhhcchHHHHH-Hh-chHHHHHHHHHHccCCcEEEEc-CcEEEecCCCCCC
Q psy1403 184 HPETFFLLRGNHESANINRIYGFYDECKR-RY-NVKLWKTFTECFNCMPVAAIVD-EKIFCCHGGLSPD 249 (384)
Q Consensus 184 ~p~~v~lLrGNHE~~~~~~~~gf~~e~~~-~~-~~~~~~~~~~~f~~LPl~a~i~-~~il~vHgGisp~ 249 (384)
-.++|++|.||||.- .++.|.- .+.+ +. ..+.| +.+..+|.+-.-. .+++-.|-||-.+
T Consensus 126 inknvvvlagnhein-~ngny~a--rlanhkls~gDTY----nlIKtldVC~YD~erkvltsHHGIird 187 (318)
T PF13258_consen 126 INKNVVVLAGNHEIN-FNGNYMA--RLANHKLSAGDTY----NLIKTLDVCNYDPERKVLTSHHGIIRD 187 (318)
T ss_pred cccceEEEecCceec-cCchHHH--HHhhCCCCccchh----hccccccccccCcchhhhhcccCceec
Confidence 346899999999985 3433321 1111 11 22333 3446677764432 3588888888643
No 142
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=23.92 E-value=58 Score=31.61 Aligned_cols=39 Identities=23% Similarity=0.328 Sum_probs=25.0
Q ss_pred ceEeecceeccCCCcHHH-HHHHHHHHHhcCCcEEEEcCCCcch
Q psy1403 156 NYLFLGDYVDRGKQSLET-ICLLLAYKIKHPETFFLLRGNHESA 198 (384)
Q Consensus 156 ~~vfLGD~VDRG~~s~ev-l~ll~~Lk~~~p~~v~lLrGNHE~~ 198 (384)
+++|+||+|.+ -..+. -..|-.+|.+++-.+.+. |=|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 58999999965 22333 356777887787665544 44554
No 143
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=23.69 E-value=1.1e+02 Score=29.04 Aligned_cols=28 Identities=18% Similarity=0.116 Sum_probs=21.9
Q ss_pred hhHHHHHHhcCCceEEEeeeeeecCeEE
Q psy1403 300 NVVKTFLDKHHMDLICRAHQVVEEGYEF 327 (384)
Q Consensus 300 ~~~~~fl~~~~l~~iIRgH~~~~~G~~~ 327 (384)
..+.+.++++++++++-||....+-...
T Consensus 183 ~~l~~ll~~~~v~~vl~GH~H~y~r~~p 210 (294)
T cd00839 183 AALEDLFYKYGVDLVLSGHVHAYERTCP 210 (294)
T ss_pred HHHHHHHHHhCCCEEEEccceeeEeech
Confidence 4577788999999999999996544433
No 144
>PF09637 Med18: Med18 protein; InterPro: IPR019095 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med18 is one subunit of the Mediator complex and a component of the head module that is involved in stimulating basal RNA polymerase II (PolII) transcription. Med18 consists of an eight-stranded beta-barrel with a central pore and three flanking helices. It complexes with Med8 and Med20 proteins by forming a heterodimer of two-fold symmetry with Med20 and binding the C-terminal alpha-helix region of Med8 across the top of its barrel. This complex creates a multipartite TBP-binding site that can be modulated by transcriptional activators []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex; PDB: 2HZM_F 2HZS_H 3RJ1_E 3C0T_A.
Probab=23.20 E-value=1.2e+02 Score=28.96 Aligned_cols=37 Identities=27% Similarity=0.527 Sum_probs=30.3
Q ss_pred ChhhHHHHHHhcCCceEEEeeeeeecCeEEecCCeEEEEe
Q psy1403 298 GPNVVKTFLDKHHMDLICRAHQVVEEGYEFFADKKLVTLF 337 (384)
Q Consensus 298 g~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvf 337 (384)
....+-.||+.+|..+ -+|.+.+||.|+.++-.|+||
T Consensus 139 ~~~~~~~fl~~lGy~~---~~Eyv~~G~~F~~g~i~I~l~ 175 (250)
T PF09637_consen 139 TSGSLLSFLNELGYRF---DYEYVVEGYRFFKGDIVIELF 175 (250)
T ss_dssp SSSSHHHHHHHTTEEE---EEEEEEEEEEEEECCEEEEEE
T ss_pred CCCCHHHHHHHcCCce---EEEEEEEEEEEEECCEEEEEE
Confidence 4566889999999655 789999999999888777766
No 145
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=22.50 E-value=5.4e+02 Score=23.53 Aligned_cols=78 Identities=19% Similarity=0.221 Sum_probs=56.0
Q ss_pred ccccCCHHHHHHHHHHHHHHHhhCCCeeeeCCCeeEEecCCCCHHHHHHHHHhCCCCC----------------------
Q psy1403 96 RNVRLEEKEIVSLIQISRKIFMSQPMLLELEPPLKICGDVHGQYTDLLRLFDHGKFPP---------------------- 153 (384)
Q Consensus 96 ~~~~l~~~~i~~l~~~a~~il~~ep~ll~i~~~i~ViGDIHG~~~~L~~il~~~g~~~---------------------- 153 (384)
..+.++++++.+-+.+..+.+.++-.= ...+++|=++|.+--+-.++..+.++.
T Consensus 8 ~evLisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i 83 (178)
T COG0634 8 KEVLISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKI 83 (178)
T ss_pred ceEeeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEE
Confidence 346789999998888887777765432 567889999999877777776655432
Q ss_pred ---------CCceEeecceeccCCCcHHHHHHH
Q psy1403 154 ---------ASNYLFLGDYVDRGKQSLETICLL 177 (384)
Q Consensus 154 ---------~~~~vfLGD~VDRG~~s~evl~ll 177 (384)
..+++.+=|++|-|.-=-.+.++|
T Consensus 84 ~kDld~di~grdVLiVeDIiDsG~TLs~i~~~l 116 (178)
T COG0634 84 LKDLDEDIKGRDVLIVEDIIDSGLTLSKVRDLL 116 (178)
T ss_pred ecccccCCCCCeEEEEecccccChhHHHHHHHH
Confidence 246889999999887544444444
No 146
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=20.94 E-value=85 Score=30.18 Aligned_cols=37 Identities=24% Similarity=0.309 Sum_probs=25.7
Q ss_pred ceEeecceeccCCCcHHHHHHHHHHHHhcCCcEEEEcC
Q psy1403 156 NYLFLGDYVDRGKQSLETICLLLAYKIKHPETFFLLRG 193 (384)
Q Consensus 156 ~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~lLrG 193 (384)
+++|+||+|.+.-. ..+-..|-.+|.+++..+.+.-|
T Consensus 1 ~ilfigdi~g~~G~-~~~~~~l~~lk~~~~~D~vi~Ng 37 (255)
T cd07382 1 KILFIGDIVGKPGR-KAVKEHLPKLKKEYKIDFVIANG 37 (255)
T ss_pred CEEEEEeCCCHHHH-HHHHHHHHHHHHHCCCCEEEECC
Confidence 47899999987542 24456777888888766555544
Done!