BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14030
(63 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P18088|DCE1_RAT Glutamate decarboxylase 1 OS=Rattus norvegicus GN=Gad1 PE=2 SV=1
Length = 593
Score = 93.2 bits (230), Expect = 5e-19, Method: Composition-based stats.
Identities = 39/50 (78%), Positives = 44/50 (88%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTV GAFDPI IADIC +Y++WLHVDAAWGGG L+SRKHRH L+GIER
Sbjct: 345 GTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLSGIER 394
>sp|P48318|DCE1_MOUSE Glutamate decarboxylase 1 OS=Mus musculus GN=Gad1 PE=2 SV=2
Length = 593
Score = 93.2 bits (230), Expect = 5e-19, Method: Composition-based stats.
Identities = 39/50 (78%), Positives = 44/50 (88%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTV GAFDPI IADIC +Y++WLHVDAAWGGG L+SRKHRH L+GIER
Sbjct: 345 GTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLSGIER 394
>sp|P14748|DCE1_FELCA Glutamate decarboxylase 1 OS=Felis catus GN=GAD1 PE=2 SV=3
Length = 594
Score = 93.2 bits (230), Expect = 5e-19, Method: Composition-based stats.
Identities = 39/50 (78%), Positives = 44/50 (88%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTV GAFDPI IADIC +Y++WLHVDAAWGGG L+SRKHRH L+GIER
Sbjct: 346 GTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLSGIER 395
>sp|A0PA85|DCE1_CANFA Glutamate decarboxylase 1 OS=Canis familiaris GN=GAD1 PE=2 SV=1
Length = 594
Score = 93.2 bits (230), Expect = 5e-19, Method: Composition-based stats.
Identities = 39/50 (78%), Positives = 44/50 (88%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTV GAFDPI IADIC +Y++WLHVDAAWGGG L+SRKHRH L+GIER
Sbjct: 346 GTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLSGIER 395
>sp|P48319|DCE1_PIG Glutamate decarboxylase 1 OS=Sus scrofa GN=GAD1 PE=2 SV=1
Length = 594
Score = 92.8 bits (229), Expect = 5e-19, Method: Composition-based stats.
Identities = 39/50 (78%), Positives = 44/50 (88%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTV GAFDPI IADIC +Y++WLHVDAAWGGG L+SRKHRH L+GIER
Sbjct: 346 GTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLSGIER 395
>sp|Q5R7S7|DCE1_PONAB Glutamate decarboxylase 1 OS=Pongo abelii GN=GAD1 PE=2 SV=1
Length = 594
Score = 92.4 bits (228), Expect = 7e-19, Method: Composition-based stats.
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTV GAFDPI IADIC +Y++WLHVDAAWGGG L+SRKHRH L GIER
Sbjct: 346 GTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIER 395
>sp|Q5IS68|DCE1_PANTR Glutamate decarboxylase 1 OS=Pan troglodytes GN=GAD1 PE=2 SV=1
Length = 594
Score = 92.4 bits (228), Expect = 7e-19, Method: Composition-based stats.
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTV GAFDPI IADIC +Y++WLHVDAAWGGG L+SRKHRH L GIER
Sbjct: 346 GTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIER 395
>sp|Q99259|DCE1_HUMAN Glutamate decarboxylase 1 OS=Homo sapiens GN=GAD1 PE=1 SV=1
Length = 594
Score = 92.4 bits (228), Expect = 7e-19, Method: Composition-based stats.
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTV GAFDPI IADIC +Y++WLHVDAAWGGG L+SRKHRH L GIER
Sbjct: 346 GTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIER 395
>sp|Q0VCA1|DCE1_BOVIN Glutamate decarboxylase 1 OS=Bos taurus GN=GAD1 PE=2 SV=1
Length = 594
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/50 (76%), Positives = 44/50 (88%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTV GAFDPI IADIC +Y++WLHVDAAWGGG L+S+KHRH L+GIER
Sbjct: 346 GTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSQKHRHKLSGIER 395
>sp|Q64611|CSAD_RAT Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus GN=Csad
PE=1 SV=1
Length = 493
Score = 86.7 bits (213), Expect = 4e-17, Method: Composition-based stats.
Identities = 36/50 (72%), Positives = 42/50 (84%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTVLGAFDP+ AIAD+C + +WLHVDAAWGG L+SR HRHLL GI+R
Sbjct: 246 GTTVLGAFDPLDAIADVCQRHGLWLHVDAAWGGSVLLSRTHRHLLDGIQR 295
>sp|Q9Y600|CSAD_HUMAN Cysteine sulfinic acid decarboxylase OS=Homo sapiens GN=CSAD PE=1
SV=2
Length = 493
Score = 85.5 bits (210), Expect = 9e-17, Method: Composition-based stats.
Identities = 35/50 (70%), Positives = 42/50 (84%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTVLGAFDP+ AIAD+C + +WLHVDAAWGG L+S+ HRHLL GI+R
Sbjct: 246 GTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQR 295
>sp|Q9DBE0|CSAD_MOUSE Cysteine sulfinic acid decarboxylase OS=Mus musculus GN=Csad PE=2
SV=1
Length = 493
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/50 (70%), Positives = 41/50 (82%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTVLGAFDP+ AIAD+C + +W HVDAAWGG L+SR HRHLL GI+R
Sbjct: 246 GTTVLGAFDPLDAIADVCQRHGLWFHVDAAWGGSVLLSRTHRHLLDGIQR 295
>sp|A6QM00|GADL1_BOVIN Glutamate decarboxylase-like protein 1 OS=Bos taurus GN=GADL1 PE=2
SV=2
Length = 521
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/50 (72%), Positives = 41/50 (82%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTVLGAFDP+ IADIC + +WLHVDA+WGG AL+SRKHR LL GI R
Sbjct: 274 GTTVLGAFDPLDEIADICERHGLWLHVDASWGGSALMSRKHRRLLQGIHR 323
>sp|Q6ZQY3|GADL1_HUMAN Glutamate decarboxylase-like protein 1 OS=Homo sapiens GN=GADL1
PE=2 SV=4
Length = 521
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/50 (72%), Positives = 41/50 (82%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTVLGAFDP+ IADIC + +WLHVDA+WGG AL+SRKHR LL GI R
Sbjct: 274 GTTVLGAFDPLDEIADICERHSLWLHVDASWGGSALMSRKHRKLLHGIHR 323
>sp|Q80WP8|GADL1_MOUSE Glutamate decarboxylase-like protein 1 OS=Mus musculus GN=Gadl1
PE=2 SV=3
Length = 550
Score = 83.2 bits (204), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/50 (70%), Positives = 41/50 (82%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTVLGAFDP+ IA++C + +WLHVDA+WGG ALVSRKHR LL GI R
Sbjct: 303 GTTVLGAFDPLDEIAEVCERHGLWLHVDASWGGSALVSRKHRRLLHGIHR 352
>sp|Q05329|DCE2_HUMAN Glutamate decarboxylase 2 OS=Homo sapiens GN=GAD2 PE=1 SV=1
Length = 585
Score = 82.8 bits (203), Expect = 5e-16, Method: Composition-based stats.
Identities = 34/50 (68%), Positives = 43/50 (86%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTV GAFDP+ A+ADIC +Y +W+HVDAAWGGG L+SRKH+ L+G+ER
Sbjct: 337 GTTVYGAFDPLLAVADICKKYKIWMHVDAAWGGGLLMSRKHKWKLSGVER 386
>sp|P48321|DCE2_PIG Glutamate decarboxylase 2 OS=Sus scrofa GN=GAD2 PE=2 SV=1
Length = 585
Score = 82.8 bits (203), Expect = 6e-16, Method: Composition-based stats.
Identities = 34/50 (68%), Positives = 43/50 (86%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTV GAFDP+ A+ADIC +Y +W+HVDAAWGGG L+SRKH+ L+G+ER
Sbjct: 337 GTTVYGAFDPLLAVADICKKYKIWMHVDAAWGGGLLMSRKHKWKLSGVER 386
>sp|P48320|DCE2_MOUSE Glutamate decarboxylase 2 OS=Mus musculus GN=Gad2 PE=2 SV=1
Length = 585
Score = 82.8 bits (203), Expect = 6e-16, Method: Composition-based stats.
Identities = 34/50 (68%), Positives = 43/50 (86%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTV GAFDP+ A+ADIC +Y +W+HVDAAWGGG L+SRKH+ L+G+ER
Sbjct: 337 GTTVYGAFDPLLAVADICKKYKIWMHVDAAWGGGLLMSRKHKWKLSGVER 386
>sp|Q4PRC2|DCE2_CANFA Glutamate decarboxylase 2 OS=Canis familiaris GN=GAD2 PE=2 SV=1
Length = 585
Score = 82.8 bits (203), Expect = 6e-16, Method: Composition-based stats.
Identities = 34/50 (68%), Positives = 43/50 (86%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTV GAFDP+ A+ADIC +Y +W+HVDAAWGGG L+SRKH+ L+G+ER
Sbjct: 337 GTTVYGAFDPLLAVADICKKYKIWMHVDAAWGGGLLMSRKHKWKLSGVER 386
>sp|Q05683|DCE2_RAT Glutamate decarboxylase 2 OS=Rattus norvegicus GN=Gad2 PE=1 SV=1
Length = 585
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 34/50 (68%), Positives = 42/50 (84%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTV GAFDP+ A+ADIC +Y +W+HVDAAWGGG L+SRKH+ L G+ER
Sbjct: 337 GTTVYGAFDPLLAVADICKKYKIWMHVDAAWGGGLLMSRKHKWKLNGVER 386
>sp|P20228|DCE_DROME Glutamate decarboxylase OS=Drosophila melanogaster GN=Gad1 PE=2
SV=2
Length = 510
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRH-LLTGIER 53
GTTVLGAFD I IADIC +Y+ W+H+DAAWGGG L+SRKHRH TG+ER
Sbjct: 262 GTTVLGAFDDINTIADICQKYNCWMHIDAAWGGGLLMSRKHRHPRFTGVER 312
>sp|Q28D99|GADL1_XENTR Glutamate decarboxylase-like protein 1 (Fragment) OS=Xenopus
tropicalis GN=gadl1 PE=2 SV=2
Length = 511
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/50 (62%), Positives = 40/50 (80%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTTVLGAFDP+ IA+IC ++ +W HVDA+WGG AL+S+K+R L GI R
Sbjct: 264 GTTVLGAFDPLDDIANICEKHKLWFHVDASWGGSALMSQKYRKRLHGIHR 313
>sp|P71362|DDC_HAEIN L-2,4-diaminobutyrate decarboxylase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ddc PE=1
SV=1
Length = 511
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIE 52
GTT GA D + AI + EY WLHVDAAWGG L+S+ +R+ L GIE
Sbjct: 261 GTTDAGAIDDLKAIRKLADEYQAWLHVDAAWGGALLLSKDYRYFLDGIE 309
>sp|Q9Z3R1|RHBB_RHIME L-2,4-diaminobutyrate decarboxylase OS=Rhizobium meliloti (strain
1021) GN=rhbB PE=3 SV=1
Length = 495
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIERPQNRSED 60
GTT LGA DP+ IAD+ A ++W+HVDAA+GGG L SR HR L G+E + + D
Sbjct: 254 GTTDLGAIDPLVEIADLAAAQNVWMHVDAAYGGGLLFSR-HRSRLEGLEHAHSITLD 309
>sp|P54769|TYDC2_PAPSO Tyrosine/DOPA decarboxylase 2 OS=Papaver somniferum GN=TYDC2 PE=2
SV=1
Length = 531
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIERPQNRS 58
GTT A DPI I ++ EY+MW+HVDAA+ G A + + RH + G+E + S
Sbjct: 260 GTTSSTAVDPISPICEVAKEYEMWVHVDAAYAGSACICPEFRHFIDGVEEADSFS 314
>sp|P48861|DDC_MANSE Aromatic-L-amino-acid decarboxylase OS=Manduca sexta GN=Ddc PE=2
SV=1
Length = 508
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTT AFD + I D+C D+WLHVDAA+ G A + ++RH + G+E+
Sbjct: 244 GTTSSCAFDALDEIGDVCNASDIWLHVDAAYAGSAFICPEYRHFMKGVEK 293
>sp|Q43908|DDC_ACIBA L-2,4-diaminobutyrate decarboxylase OS=Acinetobacter baumannii
GN=ddc PE=1 SV=1
Length = 510
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIE 52
GTT GA P+ I +I +Y W+H+DAAWGG ++S +R +L GIE
Sbjct: 260 GTTDAGAIHPLKKIREITNKYGSWMHIDAAWGGALILSNTYRAMLDGIE 308
>sp|P54770|TYDC3_PAPSO Tyrosine/DOPA decarboxylase 3 OS=Papaver somniferum GN=TYDC3 PE=2
SV=2
Length = 533
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIERPQNRS 58
GTT A DPI I ++ EY+MW+H+DAA+ G A + + RH + G+E + S
Sbjct: 260 GTTSSTAVDPIGPICEVAKEYEMWVHIDAAYAGSACICPEFRHFIDGVEEADSFS 314
>sp|Q7XHL3|TYDC1_ORYSJ Tyrosine decarboxylase 1 OS=Oryza sativa subsp. japonica
GN=Os07g0437500 PE=2 SV=1
Length = 497
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIE 52
GTT A DP+P + I DMW H+DAA+ G A + ++RH L G+E
Sbjct: 255 GTTSSSAVDPLPELGQIAKSNDMWFHIDAAYAGSACICPEYRHHLNGVE 303
>sp|P80041|DDC_PIG Aromatic-L-amino-acid decarboxylase OS=Sus scrofa GN=DDC PE=1 SV=2
Length = 486
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIE 52
GTT +FD + + IC E D+WLHVDAA+ G A + + RHLL G+E
Sbjct: 244 GTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVE 292
>sp|P20711|DDC_HUMAN Aromatic-L-amino-acid decarboxylase OS=Homo sapiens GN=DDC PE=1
SV=2
Length = 480
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIE 52
GTT +FD + + IC + D+WLHVDAA+ G A + + RHLL G+E
Sbjct: 244 GTTTCCSFDNLLEVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVE 292
>sp|P22781|DDC_CAVPO Aromatic-L-amino-acid decarboxylase OS=Cavia porcellus GN=DDC PE=2
SV=1
Length = 480
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIE 52
GTT +FD + + IC + +MWLH+DAA+ G A + + RHLL G+E
Sbjct: 244 GTTNCCSFDSLLEVGPICNQEEMWLHIDAAYAGSAFICPEFRHLLDGVE 292
>sp|P27718|DDC_BOVIN Aromatic-L-amino-acid decarboxylase OS=Bos taurus GN=DDC PE=2 SV=2
Length = 487
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIE 52
GTT +FD + + IC E +WLHVDAA+ G A + + RHLL G+E
Sbjct: 244 GTTSCCSFDNLLEVGPICHEEGLWLHVDAAYAGSAFICPEFRHLLNGVE 292
>sp|Q06087|TYDC3_PETCR Tyrosine decarboxylase 3 OS=Petroselinum crispum GN=TYRDC-3 PE=2
SV=1
Length = 516
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 12 DPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIERPQNRS 58
DP+PA+ ++ +YD+W+HVDAA+ G A + + R L G+E + S
Sbjct: 268 DPLPALTEVAKKYDLWVHVDAAYAGSACICPEFRQYLDGVENADSFS 314
>sp|Q06086|TYDC2_PETCR Tyrosine decarboxylase 2 OS=Petroselinum crispum GN=TYRDC-2 PE=2
SV=1
Length = 514
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 12 DPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIERPQNRS 58
DP+PA+ ++ +YD+W+HVDAA+ G A + + R L G+E + S
Sbjct: 266 DPLPALTEVAKKYDLWVHVDAAYAGSACICPEFRQYLDGVENADSFS 312
>sp|Q06088|TYDC4_PETCR Tyrosine decarboxylase 4 OS=Petroselinum crispum GN=TYRDC-4 PE=2
SV=1
Length = 508
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 12 DPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIERPQNRS 58
DP+PA+ ++ +YD+W+HVDAA+ G A + + R L G+E + S
Sbjct: 267 DPLPALTEVAKKYDLWVHVDAAYAGSACICPEFRQYLDGVENADSFS 313
>sp|Q05733|DCHS_DROME Histidine decarboxylase OS=Drosophila melanogaster GN=Hdc PE=2 SV=2
Length = 847
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTT +FD + I +CAE+ +WLHVDAA+ G A + + R L GIER
Sbjct: 245 GTTGSCSFDNLEEIGIVCAEHHLWLHVDAAYAGSAFICPEFRTWLRGIER 294
>sp|Q9M0G4|TYDC2_ARATH Probable tyrosine decarboxylase 2 OS=Arabidopsis thaliana
GN=At4g28680 PE=2 SV=1
Length = 545
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIE 52
GTT A DP+ + +I +Y +WLHVDAA+ G A + ++R + GIE
Sbjct: 302 GTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIE 350
>sp|O96569|L2AM_DROLE Alpha-methyldopa hypersensitive protein (Fragment) OS=Drosophila
lebanonensis GN=amd PE=3 SV=1
Length = 439
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTT A+D + ++A +C +Y++WLHVDAA+ GGA + L G+ER
Sbjct: 173 GTTGTCAYDDVDSLATVCEQYNVWLHVDAAYAGGAFALDECSELRRGLER 222
>sp|P17770|DDC_CATRO Aromatic-L-amino-acid decarboxylase OS=Catharanthus roseus GN=TDC
PE=2 SV=1
Length = 500
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 12 DPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
DP+ ++++I E+ +W+HVDAA+ G A + + RH L GIER
Sbjct: 268 DPVDSLSEIANEFGIWIHVDAAYAGSACICPEFRHYLDGIER 309
>sp|P54771|TYDC5_PAPSO Tyrosine/DOPA decarboxylase 5 OS=Papaver somniferum GN=TYDC5 PE=2
SV=1
Length = 523
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIERPQNRS 58
GTT A DPI + ++ ++ +W+HVDAA+ G A + + RH + G+E + S
Sbjct: 262 GTTSSTAVDPIGPLCEVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEEADSFS 316
>sp|Q06085|TYDC1_PETCR Tyrosine decarboxylase 1 (Fragment) OS=Petroselinum crispum
GN=TYRDC-1 PE=2 SV=1
Length = 432
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 12 DPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIERPQNRS 58
DP+PA+ ++ +Y +W+HVDAA+ G A + + R L G+E + S
Sbjct: 243 DPLPALTEVAKKYKLWVHVDAAYAGSACICPEFRQYLDGVENADSFS 289
>sp|P16453|DCHS_RAT Histidine decarboxylase OS=Rattus norvegicus GN=Hdc PE=2 SV=2
Length = 656
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIE 52
GTT + AFD + + ICA +WLHVDAA+ G A + + R L GIE
Sbjct: 249 GTTGVCAFDKLSELGPICAREGLWLHVDAAYAGTAFLRPELRGFLKGIE 297
>sp|P18486|L2AM_DROME Alpha-methyldopa hypersensitive protein OS=Drosophila melanogaster
GN=amd PE=2 SV=2
Length = 510
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTT A+D I +++ +C E+ +WLHVDAA+ GGA + L G++R
Sbjct: 244 GTTGTCAYDDIESLSAVCEEFKVWLHVDAAYAGGAFALEECSDLRKGLDR 293
>sp|O88533|DDC_MOUSE Aromatic-L-amino-acid decarboxylase OS=Mus musculus GN=Ddc PE=2
SV=1
Length = 480
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIE 52
GTT +FD + + IC + +WLH+DAA+ G A + + R+LL G+E
Sbjct: 244 GTTSCCSFDNLLEVGPICNQEGVWLHIDAAYAGSAFICPEFRYLLNGVE 292
>sp|P81893|L2AM_DROSI Alpha-methyldopa hypersensitive protein (Fragment) OS=Drosophila
simulans GN=amd PE=2 SV=1
Length = 328
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIER 53
GTT A+D I +++ +C E+ +WLHVDAA+ GGA + L G++R
Sbjct: 163 GTTGTCAYDDIESLSAVCEEFKVWLHVDAAYAGGAFALEECSDLRKGLDR 212
>sp|P14173|DDC_RAT Aromatic-L-amino-acid decarboxylase OS=Rattus norvegicus GN=Ddc
PE=1 SV=1
Length = 480
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIE 52
GTT +FD + + IC + +WLH+DAA+ G A + + R+LL G+E
Sbjct: 244 GTTSCCSFDNLLEVGPICNQEGVWLHIDAAYAGSAFICPEFRYLLNGVE 292
>sp|Q9HSA3|MFNA_HALSA L-tyrosine decarboxylase OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=mfnA PE=3 SV=1
Length = 355
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 26/41 (63%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKH 44
GTT G DPIPA+ADI A D LHVDAAWGG L H
Sbjct: 152 GTTEYGRVDPIPALADIAAGVDANLHVDAAWGGFVLPFTDH 192
>sp|B0R349|MFNA_HALS3 L-tyrosine decarboxylase OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=mfnA PE=3 SV=1
Length = 355
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 26/41 (63%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKH 44
GTT G DPIPA+ADI A D LHVDAAWGG L H
Sbjct: 152 GTTEYGRVDPIPALADIAAGVDANLHVDAAWGGFVLPFTDH 192
>sp|Q5EA83|DCHS_BOVIN Histidine decarboxylase OS=Bos taurus GN=HDC PE=2 SV=1
Length = 658
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 4 GTTVLGAFDPIPAIADICAEYDMWLHVDAAWGGGALVSRKHRHLLTGIE 52
GTT + AFD + + ICA +WLH+DAA+ G A + + R L GIE
Sbjct: 246 GTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIE 294
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.473
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,625,644
Number of Sequences: 539616
Number of extensions: 850153
Number of successful extensions: 1559
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1431
Number of HSP's gapped (non-prelim): 130
length of query: 63
length of database: 191,569,459
effective HSP length: 35
effective length of query: 28
effective length of database: 172,682,899
effective search space: 4835121172
effective search space used: 4835121172
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)