BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14042
(238 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9P2L0|WDR35_HUMAN WD repeat-containing protein 35 OS=Homo sapiens GN=WDR35 PE=1 SV=3
Length = 1181
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 146 AVIVGSVDGNRIWGKEFKKTSMLGVQWTSDSQNLLFAIKGGQVHLYDYEGNFMNKVSM 203
AVIVGSVDGNRIWGK+ K + V W++DS+ LLF + G++H+YD +GNFM K+ +
Sbjct: 138 AVIVGSVDGNRIWGKDLKGIQLSHVTWSADSKVLLFGMANGEIHIYDNQGNFMIKMKL 195
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 1 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKPSY 43
MNQ+L+GHSG V+ + WNEQY+KLT+SDE GLIIVWMLYK S+
Sbjct: 63 MNQTLEGHSGSVQVVTWNEQYQKLTTSDENGLIIVWMLYKGSW 105
>sp|Q8BND3|WDR35_MOUSE WD repeat-containing protein 35 OS=Mus musculus GN=Wdr35 PE=2 SV=3
Length = 1181
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 44/58 (75%)
Query: 146 AVIVGSVDGNRIWGKEFKKTSMLGVQWTSDSQNLLFAIKGGQVHLYDYEGNFMNKVSM 203
AVIVGSVDGNRIWGK+ K + V W++DS+ LLF + G++H+YD +GNF+ K+ +
Sbjct: 138 AVIVGSVDGNRIWGKDLKGIQLCHVTWSADSKILLFGMANGEIHIYDNQGNFIMKMKL 195
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 39/45 (86%)
Query: 1 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKPSYHR 45
MNQ+L+GHSG V+ + WNEQY+KLT+SD+ GLIIVWMLYK S++
Sbjct: 63 MNQNLEGHSGAVQVVTWNEQYQKLTTSDQNGLIIVWMLYKGSWYE 107
>sp|A6N6J5|WDR35_RAT WD repeat-containing protein 35 OS=Rattus norvegicus GN=Wdr35 PE=1
SV=1
Length = 1170
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 44/58 (75%)
Query: 146 AVIVGSVDGNRIWGKEFKKTSMLGVQWTSDSQNLLFAIKGGQVHLYDYEGNFMNKVSM 203
AVIVGSVDGNRIWGK+ K + V W++DS+ LLF + G++H+YD +GNF+ K+ +
Sbjct: 138 AVIVGSVDGNRIWGKDLKGIQLCHVTWSADSKILLFGMANGEIHIYDNQGNFIMKMKL 195
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 39/44 (88%)
Query: 1 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKPSYH 44
MNQ+L+GHSG V+ + WNEQY+KLT+SD+ GLIIVWMLYK S++
Sbjct: 63 MNQNLEGHSGAVQVVTWNEQYQKLTTSDQNGLIIVWMLYKGSWY 106
>sp|Q8IYK8|REM2_HUMAN GTP-binding protein REM 2 OS=Homo sapiens GN=REM2 PE=1 SV=2
Length = 340
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
LI+ + + S+ +V + ++RL P I+V NK DLAR+R VS ++ ++LA +
Sbjct: 192 LIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVGNKSDLARSREVSLEEGRHLAGTL 251
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGG 128
K IE S +HHN EL G + QIRL+R GG
Sbjct: 252 SCKHIETSAALHHNTRELFEGAVRQIRLRRGRNHAGG 288
>sp|Q9WTY2|REM2_RAT GTP-binding protein REM 2 OS=Rattus norvegicus GN=Rem2 PE=1 SV=2
Length = 341
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
LI+ + + S+ +V + ++RL P I+V NK DLAR+R VS ++ ++LA +
Sbjct: 193 LIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVGNKSDLARSREVSLEEGRHLAGTL 252
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQ--------AAAPWKSNTTLVR 143
K IE S +HHN EL G + QIRL+R GG + A P + + +
Sbjct: 253 SCKHIETSAALHHNTRELFEGAVRQIRLRRGRGHAGGQRPEPSSPDGPAPPTRRESLTKK 312
Query: 144 ASAVIVGSVDGNRIWGKEFKKTS 166
A + V N K FK+ S
Sbjct: 313 AKRFLANLVPRN---AKFFKQRS 332
>sp|Q8VEL9|REM2_MOUSE GTP-binding protein REM 2 OS=Mus musculus GN=Rem2 PE=1 SV=2
Length = 341
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
LI+ + + + +V + ++RL P I+V NK DLAR+R VS ++ ++LA +
Sbjct: 193 LIVFSVTDRRGFSKVPETLLRLRAGRPHHDLPVILVGNKSDLARSREVSLEEGRHLAGTL 252
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQ--------AAAPWKSNTTLVR 143
K IE S +HHN EL G + QIRL+R GG + A P + + +
Sbjct: 253 SCKHIETSAALHHNTRELFEGAVRQIRLRRGRGHAGGQRPEPSSPDGPAPPTRRESLTKK 312
Query: 144 ASAVIVGSVDGNRIWGKEFKKTS 166
A + V N K FK+ S
Sbjct: 313 AKRFLANLVPRN---AKFFKQRS 332
>sp|Q5R541|GEM_PONAB GTP-binding protein GEM OS=Pongo abelii GN=GEM PE=2 SV=1
Length = 296
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
LI+ + + S+ + + I+L P I+V NK DL R R VS + + A F
Sbjct: 154 LIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRTCAVVF 213
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQAAAPWKSNTTLVRASAVIVGS 151
KFIE S + HNV EL GI+ Q+RL+R + + A + + +A
Sbjct: 214 DCKFIETSAAVQHNVKELFEGIVRQVRLRRDSKEKNERRLAYQKRKESMPRKA------- 266
Query: 152 VDGNRIWGKEFKKTSMLGVQWTSDSQNLLFAIKGGQVH 189
R WGK K +++N+ F +K H
Sbjct: 267 ---RRFWGKIVAK----------NNKNMAFKLKSKSCH 291
>sp|P55040|GEM_HUMAN GTP-binding protein GEM OS=Homo sapiens GN=GEM PE=1 SV=1
Length = 296
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
LI+ + + S+ + + I+L P I+V NK DL R R VS + + A F
Sbjct: 154 LIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVF 213
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQAAAPWKSNTTLVRASAVIVGS 151
KFIE S + HNV EL GI+ Q+RL+R + + A + + +A
Sbjct: 214 DCKFIETSAAVQHNVKELFEGIVRQVRLRRDSKEKNERRLAYQKRKESMPRKA------- 266
Query: 152 VDGNRIWGKEFKKTSMLGVQWTSDSQNLLFAIKGGQVH 189
R WGK K +++N+ F +K H
Sbjct: 267 ---RRFWGKIVAK----------NNKNMAFKLKSKSCH 291
>sp|P55041|GEM_MOUSE GTP-binding protein GEM OS=Mus musculus GN=Gem PE=1 SV=2
Length = 295
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
LI+ + + S+ + + I+L P I+V NK DL R R VS + + A F
Sbjct: 153 LIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVF 212
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQAAAPWKSNTTLVRASAVIVGS 151
KFIE S + HNV EL GI+ Q+RL+R + + A + + +A
Sbjct: 213 DCKFIETSAAVQHNVKELFEGIVRQVRLRRDSKEKNERRLAYQKRRESIPRKA------- 265
Query: 152 VDGNRIWGKEFKKTSMLGVQWTSDSQNLLFAIKGGQVH 189
R WGK K +++N+ F +K H
Sbjct: 266 ---RRFWGKIVAK----------NNKNMAFKLKSKSCH 290
>sp|O35929|REM1_MOUSE GTP-binding protein REM 1 OS=Mus musculus GN=Rem1 PE=1 SV=1
Length = 297
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 52 RLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLV 111
R H+ ++ P I+V NK DLAR R VS ++ + A F KFIE S + HNV EL
Sbjct: 180 RTHQANHV---PIILVGNKADLARCREVSVEEGRACAVVFDCKFIETSATLQHNVTELFE 236
Query: 112 GILNQIRLKR 121
G++ Q+RL+R
Sbjct: 237 GVVRQLRLRR 246
>sp|O88667|RAD_MOUSE GTP-binding protein RAD OS=Mus musculus GN=Rrad PE=1 SV=1
Length = 308
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
+I+ + K S+ + + ++L P I+V NK DL R+R VS + + A F
Sbjct: 166 VIVYSITDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRSREVSVDEGRACAVVF 225
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKR 121
KFIE S +HHNV L G++ QIRL+R
Sbjct: 226 DCKFIETSAALHHNVQALFEGVVRQIRLRR 255
>sp|P55042|RAD_HUMAN GTP-binding protein RAD OS=Homo sapiens GN=RRAD PE=1 SV=2
Length = 308
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
+I+ + K S+ + + ++L P I+V NK DL R+R VS + + A F
Sbjct: 166 VIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRSREVSVDEGRACAVVF 225
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRS 122
KFIE S +HHNV L G++ QIRL+R
Sbjct: 226 DCKFIETSAALHHNVQALFEGVVRQIRLRRD 256
>sp|P55043|RAD_RAT GTP-binding protein RAD OS=Rattus norvegicus GN=Rrad PE=2 SV=2
Length = 306
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 37/59 (62%)
Query: 63 PAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKR 121
P I+V NK DL R+R VS + + A F KFIE S +HHNV L G++ QIRL+R
Sbjct: 195 PIILVGNKSDLVRSREVSVDEGRACAEVFDCKFIETSAALHHNVQALFEGVVRQIRLRR 253
>sp|P0CQ42|RAS_CRYNJ Ras-like protein OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=RAS1 PE=2
SV=1
Length = 216
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Query: 22 EKLTSSDETGLIIVWMLYKPSYHRV---EQDVIRLHEEGYLRTRPAIIVANKIDLARARA 78
E+ + E L++ + + S+ V Q ++R+ ++ Y P ++VANK DL R
Sbjct: 75 EQYMRTGEGFLLVYSITSRSSFEEVSTFHQQILRVKDKDYF---PVVVVANKCDLEYERQ 131
Query: 79 VSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQAA-APWKS 137
V + ++LA F + IE S NVDE + ++ IR R ++G QA AP KS
Sbjct: 132 VQPHEGRDLAKRFNAQCIETSAKQRVNVDEAFIAVVRAIR--RYQKESGPPQAVNAPAKS 189
Query: 138 NTTLV 142
+ V
Sbjct: 190 QMSAV 194
>sp|P0CQ43|RAS_CRYNB Ras-like protein OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=RAS1 PE=3 SV=1
Length = 216
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Query: 22 EKLTSSDETGLIIVWMLYKPSYHRV---EQDVIRLHEEGYLRTRPAIIVANKIDLARARA 78
E+ + E L++ + + S+ V Q ++R+ ++ Y P ++VANK DL R
Sbjct: 75 EQYMRTGEGFLLVYSITSRSSFEEVSTFHQQILRVKDKDYF---PVVVVANKCDLEYERQ 131
Query: 79 VSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQAA-APWKS 137
V + ++LA F + IE S NVDE + ++ IR R ++G QA AP KS
Sbjct: 132 VQPHEGRDLAKRFNAQCIETSAKQRVNVDEAFIAVVRAIR--RYQKESGPPQAVNAPAKS 189
Query: 138 NTTLV 142
+ V
Sbjct: 190 QMSAV 194
>sp|O42785|RASL_COLTR Ras-like protein OS=Colletotrichum trifolii GN=RAS PE=2 SV=1
Length = 214
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 22 EKLTSSDETGLIIVWMLYKPSYHRV---EQDVIRLHEEGYLRTRPAIIVANKIDLARARA 78
E+ + E L++ + + S+ + +Q ++R+ ++ Y P ++V NK DL R
Sbjct: 74 EQYMRTGEGFLLVYSITSRQSFEEITTFQQQILRVKDKDYF---PMVVVGNKCDLEGERE 130
Query: 79 VSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIR 118
V+ Q+ + LA SF KFIE S NVD+ I+ +IR
Sbjct: 131 VTRQEGEALAKSFGCKFIETSAKSRINVDKAFYDIVREIR 170
>sp|P22126|RAS1_NEUCR Protein ras-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=ras-1 PE=2 SV=1
Length = 213
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 51 IRLHEEGYLRTR-----PAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHN 105
IR++++ LR + P IIV NK DL R VS Q+ + LAA F K+IE S HN
Sbjct: 98 IRIYQQQILRVKDRDSFPMIIVGNKYDLRGERVVSEQEGQALAAEFGTKYIETSAKTQHN 157
Query: 106 VDELLVGILNQIR 118
V+ ++ +IR
Sbjct: 158 VENAFYDLVREIR 170
>sp|O93856|RAS_LACBI Ras-like protein OS=Laccaria bicolor PE=2 SV=1
Length = 209
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Query: 22 EKLTSSDETGLIIVWMLYKPSYHRV---EQDVIRLHEEGYLRTRPAIIVANKIDLARARA 78
E+ + E L++ + + S+ + +Q ++R+ ++ Y P I+V NK DL + R
Sbjct: 74 EQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKDKDYF---PIIVVGNKCDLDKERV 130
Query: 79 VSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQI-RLKRSLVQTGGAQAAAP 134
VS Q+ ++LA F KFIE S NV+ ++ +I R + + G A AP
Sbjct: 131 VSKQEGESLARQFGCKFIETSAKSRINVENAFYDLVREIRRYNKEMSNPSGFGARAP 187
>sp|P87018|RAS_BOTFU Ras-like protein OS=Botryotinia fuckeliana GN=ras1 PE=3 SV=1
Length = 212
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 22 EKLTSSDETGLIIVWMLYKPSYHRV---EQDVIRLHEEGYLRTRPAIIVANKIDLARARA 78
E+ + E L++ + + S+ + +Q ++R+ ++ Y P I+V NK DL R
Sbjct: 74 EQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKDKDYF---PIIVVGNKCDLEGERQ 130
Query: 79 VSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIR 118
VS Q+ + LA F KFIE S NVD I+ +IR
Sbjct: 131 VSKQEGQQLADDFGCKFIETSAKSRINVDNAFYDIVREIR 170
>sp|Q12526|RAS_EMENI Ras-like protein OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=rasA PE=2 SV=2
Length = 212
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 22 EKLTSSDETGLIIVWMLYKPSYHRV---EQDVIRLHEEGYLRTRPAIIVANKIDLARARA 78
E+ + E L++ + + S+ + +Q ++R+ ++ Y P I+V NK DL + R
Sbjct: 74 EQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKDKDYF---PIIVVGNKCDLDKERV 130
Query: 79 VSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIR 118
VS Q+ ++LA F KFIE S NV+ ++ +IR
Sbjct: 131 VSEQEGESLARQFGCKFIETSAKSRINVENAFYDLVREIR 170
>sp|O75628|REM1_HUMAN GTP-binding protein REM 1 OS=Homo sapiens GN=REM1 PE=1 SV=2
Length = 298
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 52 RLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLV 111
R H+ ++ P I+V NK DLAR R VS ++ + A F KFIE S + HNV EL
Sbjct: 181 RTHQADHV---PIILVGNKADLARCREVSVEEGRACAVVFDCKFIETSATLQHNVAELFE 237
Query: 112 G 112
G
Sbjct: 238 G 238
>sp|P22278|RAS1_MUCCL Ras-like protein 1 OS=Mucor circinelloides f. lusitanicus GN=RAS1
PE=2 SV=1
Length = 203
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 48 QDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVD 107
Q + R+ + Y P ++V NK DL R VSSQ+ ++LA +F +FIE S NVD
Sbjct: 105 QQICRVKDRDYF---PMVLVGNKCDLEGDRQVSSQEGRDLAKNFGCQFIETSAKQRINVD 161
Query: 108 ELLVGILNQIR 118
E ++ IR
Sbjct: 162 EAFFEVVRDIR 172
>sp|P70425|RIT2_MOUSE GTP-binding protein Rit2 OS=Mus musculus GN=Rit2 PE=1 SV=1
Length = 217
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 63 PAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRS 122
P ++V NKIDL + R VS+++ NLA + F E S + +D+ G++ +IR K S
Sbjct: 127 PLVLVGNKIDLEQFRQVSTEEGMNLARDYNCAFFETSAALRFGIDDAFQGLVREIRRKES 186
Query: 123 LV 124
++
Sbjct: 187 ML 188
>sp|Q01111|YPT3_NICPL Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2
SV=1
Length = 218
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGY 58
+SL + ++A IW+ E+Y +TS+ G + ++Y + H ++V R +E
Sbjct: 53 KSLNIDNKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELR 112
Query: 59 LRTRPAIIV---ANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILN 115
T P I+V NK DL AVS+ +AK LA + F+E S NV+ L
Sbjct: 113 DHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALT 172
Query: 116 QIR--LKRSLVQTG--GAQAAAPWKSNTTLVR 143
QI + + V+ G GA ++AP K T ++
Sbjct: 173 QIYRIVSKKAVEAGDEGATSSAPPKGETINIK 204
>sp|P28185|RAA1A_ARATH Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=1
SV=1
Length = 216
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Query: 12 VRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIV 67
V+A IW+ E+Y +TS+ G + ++Y + H ++ R E T P I+V
Sbjct: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVV 121
Query: 68 ---ANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRL---KR 121
NK DL AV +++AK A + F+E S NV+ +L QI KR
Sbjct: 122 MLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKR 181
Query: 122 SLVQTGGAQAAAPWKSNTTLVRASAVIV 149
S V GG A P K T V+ ++
Sbjct: 182 S-VDGGGESADLPGKGETINVKEDGSVL 208
>sp|Q5BJQ5|RIT2_RAT GTP-binding protein Rit2 OS=Rattus norvegicus GN=Rit2 PE=2 SV=1
Length = 217
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 63 PAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRS 122
P ++V NKIDL + R VS+++ LA + F E S + +D+ G++ +IR K S
Sbjct: 127 PLVLVGNKIDLEQFRQVSTEEGMTLARDYNCAFFETSAALRFGIDDAFQGLVREIRRKES 186
Query: 123 LV 124
++
Sbjct: 187 ML 188
>sp|Q9LK99|RAA1G_ARATH Ras-related protein RABA1g OS=Arabidopsis thaliana GN=RABA1G PE=2
SV=1
Length = 217
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 12 VRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAII- 66
V+A IW+ E+Y +TS+ G + ++Y + H ++V R +E T I+
Sbjct: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVI 121
Query: 67 --VANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRSLV 124
V NK DL RAVS++DAK A F+E S NV+ +L+QI
Sbjct: 122 MLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQI------Y 175
Query: 125 QTGGAQAAAPWKSNTTLVRASAVIVGSVD 153
+ +A +TTL + ++ VGS D
Sbjct: 176 RVASKKALDIGDDHTTLPKGQSINVGSKD 204
>sp|Q9SN35|RAA1D_ARATH Ras-related protein RABA1d OS=Arabidopsis thaliana GN=RABA1D PE=2
SV=1
Length = 214
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGY 58
+SL + ++A IW+ E+Y +TS+ G + ++Y + H ++V R E
Sbjct: 53 RSLNVNEKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELR 112
Query: 59 LRTRPAIIV---ANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILN 115
T P I+V NK DL AV ++DAK+ A + + F+E S NV+ +L
Sbjct: 113 DHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLT 172
Query: 116 QIR--LKRSLVQTGGAQAAAPWKSNTTLVRASAV 147
QI + + ++ G P K V SAV
Sbjct: 173 QIYHVVSKKAMEAGEDSGNVPSKGEKIDVDVSAV 206
>sp|Q9FJH0|RAA1F_ARATH Ras-related protein RABA1f OS=Arabidopsis thaliana GN=RABA1F PE=2
SV=1
Length = 217
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 12 VRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAII- 66
V+A IW+ E+Y +TS+ G + ++Y + H ++V R +E T I+
Sbjct: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVI 121
Query: 67 --VANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIR--LKRS 122
V NK DL RAVS++DAK A F+E S NV+ +L+QI + R
Sbjct: 122 MFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRK 181
Query: 123 LVQTGGAQAAAP 134
+ G AA P
Sbjct: 182 ALDIGDDPAALP 193
>sp|P28775|RAS_LENED Ras-like protein OS=Lentinula edodes PE=3 SV=1
Length = 217
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 22 EKLTSSDETGLIIVWMLYKPSYHRV---EQDVIRLHEEGYLRTRPAIIVANKIDLARARA 78
E+ + E L++ + + S+ + Q ++R+ ++ T P ++VANK DL R
Sbjct: 76 EQYMRTGEGFLLVYSITSRNSFEEISTFHQQILRVKDQD---TFPVVVVANKCDLEYERQ 132
Query: 79 VSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIR 118
V + ++LA F KF+E S + NVD+ ++ +IR
Sbjct: 133 VGMNEGRDLARHFGCKFVETSAKVRINVDQAFQDLVREIR 172
>sp|Q95KD9|DIRA2_MACFA GTP-binding protein Di-Ras2 OS=Macaca fascicularis GN=DIRAS2 PE=2
SV=1
Length = 199
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 40 KPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVS 99
KP Y ++ +G + + P ++V NK D + +R V S +A+ LA ++K F+E S
Sbjct: 98 KPIYEQI------CEIKGDMESIPIMLVGNKCDESPSREVQSSEAEALARTWKCAFMETS 151
Query: 100 VGIHHNVDELLVGILNQIRLKRSLVQTGGAQA 131
++HNV EL +LN + + +Q G ++
Sbjct: 152 AKLNHNVKELFQELLNLEKRRTVSLQIDGKKS 183
>sp|Q99578|RIT2_HUMAN GTP-binding protein Rit2 OS=Homo sapiens GN=RIT2 PE=1 SV=1
Length = 217
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 63 PAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRS 122
P ++V NKIDL + R VS+++ +LA + F E S + +D+ G++ +IR K S
Sbjct: 127 PLVLVGNKIDLEQFRQVSTEEGLSLAQEYNCGFFETSAALRFCIDDAFHGLVREIRKKES 186
Query: 123 L 123
+
Sbjct: 187 M 187
>sp|Q05058|RASL_COPCI 24 kDa Ras-like protein OS=Coprinopsis cinerea GN=CC-RAS PE=3 SV=1
Length = 215
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 22 EKLTSSDETGLIIVWMLYKPSYHRV---EQDVIRLHEEGYLRTRPAIIVANKIDLARARA 78
E+ + E L++ + + S+ + Q ++R+ ++ P I+VANK DL R
Sbjct: 76 EQYMRTGEGFLLVYSITSRNSFEEISIFHQQILRVKDQDSF---PVIVVANKCDLEYERQ 132
Query: 79 VSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIR 118
V + ++LA F KFIE S NVDE ++ +IR
Sbjct: 133 VGMNEGRDLAKHFGCKFIETSAKQRINVDEAFSNLVREIR 172
>sp|A8NU18|RASL_COPC7 24 kDa Ras-like protein OS=Coprinopsis cinerea (strain Okayama-7 /
130 / ATCC MYA-4618 / FGSC 9003) GN=CC-RAS PE=3 SV=3
Length = 215
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 22 EKLTSSDETGLIIVWMLYKPSYHRV---EQDVIRLHEEGYLRTRPAIIVANKIDLARARA 78
E+ + E L++ + + S+ + Q ++R+ ++ P I+VANK DL R
Sbjct: 76 EQYMRTGEGFLLVYSITSRNSFEEISIFHQQILRVKDQDSF---PVIVVANKCDLEYERQ 132
Query: 79 VSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIR 118
V + ++LA F KFIE S NVDE ++ +IR
Sbjct: 133 VGMNEGRDLAKHFGCKFIETSAKQRINVDEAFSNLVREIR 172
>sp|P36412|RB11A_DICDI Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A
PE=1 SV=1
Length = 214
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 2 NQSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLY----KPSYHRVEQDVIRL 53
+++Q ++A +W+ E+Y +TS+ G + ++Y + +Y VE+ ++ L
Sbjct: 52 TRTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILEL 111
Query: 54 HEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGI 113
E R ++V NK DL R VS+ +AK + K+ FIE S NV+ I
Sbjct: 112 RENAD-RNIEIMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNI 170
Query: 114 LNQI 117
L QI
Sbjct: 171 LTQI 174
>sp|Q96HU8|DIRA2_HUMAN GTP-binding protein Di-Ras2 OS=Homo sapiens GN=DIRAS2 PE=1 SV=1
Length = 199
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 40 KPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVS 99
KP Y ++ +G + + P ++V NK D + +R V S +A+ LA ++K F+E S
Sbjct: 98 KPIYEQI------CEIKGDVESIPIMLVGNKCDESPSREVQSSEAEALARTWKCAFMETS 151
Query: 100 VGIHHNVDELLVGILNQIRLKRSLVQTGGAQA 131
++HNV EL +LN + + +Q G ++
Sbjct: 152 AKLNHNVKELFQELLNLEKRRTVSLQIDGKKS 183
>sp|Q5R6S2|DIRA2_PONAB GTP-binding protein Di-Ras2 OS=Pongo abelii GN=DIRAS2 PE=2 SV=1
Length = 199
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 40 KPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVS 99
KP Y ++ +G + + P ++V NK D + +R V S +A+ LA ++K F+E S
Sbjct: 98 KPIYEQI------CEIKGDVESIPIMLVGNKCDESPSREVQSSEAEALARTWKCAFMETS 151
Query: 100 VGIHHNVDELLVGILNQIRLKRSLVQTGGAQA 131
++HNV EL +LN + + +Q G ++
Sbjct: 152 AKLNHNVKELFQELLNLEKRRTVSLQIDGKKS 183
>sp|Q9S810|RAA1I_ARATH Ras-related protein RABA1i OS=Arabidopsis thaliana GN=RABA1I PE=2
SV=1
Length = 218
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGY 58
+S+Q V+A IW+ E+Y +TS+ G + ++Y + H ++V R +E
Sbjct: 53 RSIQCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR 112
Query: 59 LRTRPAII---VANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILN 115
T I+ V NK DL RA+S+++AK A F+E S NVD +L
Sbjct: 113 DHTDANIVIMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLT 172
Query: 116 QI 117
QI
Sbjct: 173 QI 174
>sp|P32252|RASB_DICDI Ras-like protein rasB OS=Dictyostelium discoideum GN=rasB PE=1 SV=1
Length = 197
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 46 VEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHN 105
V + +IR+ + + P ++V NK DL R V+ + LA SF V F+E S N
Sbjct: 99 VREQIIRVKDNDKV---PIVLVGNKCDLENLREVTEGEGSELAKSFSVPFLETSAKKRLN 155
Query: 106 VDELLVGILNQIRLKRSLVQTGGAQ 130
VDE ++ +I K+SL + G ++
Sbjct: 156 VDECFFEVVREI--KKSLKEPGRSK 178
>sp|Q5PR73|DIRA2_MOUSE GTP-binding protein Di-Ras2 OS=Mus musculus GN=Diras2 PE=2 SV=1
Length = 199
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 40 KPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVS 99
KP Y ++ +G + + P ++V NK D + R V S +A+ LA ++K F+E S
Sbjct: 98 KPIYEQI------CEIKGDVESIPIMLVGNKCDESPNREVQSSEAEALARTWKCAFMETS 151
Query: 100 VGIHHNVDELLVGILNQIRLKRSLVQTGGAQA 131
++HNV EL +LN + + +Q G ++
Sbjct: 152 AKLNHNVKELFQELLNLEKRRTVSLQIDGKKS 183
>sp|P34726|RAS2_PHYPO Ras-like protein 2 OS=Physarum polycephalum GN=RAS-2 PE=2 SV=1
Length = 193
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 61 TRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIR 118
T P ++ NK DLA R V++ + + LA +F F+E S NV+E G++ +IR
Sbjct: 110 TVPMVLAGNKCDLASERQVTTNEGQELARAFGCPFVETSAKARLNVEECFYGLVREIR 167
>sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1
Length = 217
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 12 VRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAII- 66
V+A IW+ E+Y +TS+ G + ++Y + H ++V R +E T I+
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVI 122
Query: 67 --VANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIR--LKRS 122
V NK DL RAVS++DAK A F+E S NV+ +L +I + R
Sbjct: 123 MLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRK 182
Query: 123 LVQTGGAQAAAP 134
++ G AA P
Sbjct: 183 ALEVGDDPAALP 194
>sp|P40393|RIC2_ORYSJ Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2
PE=2 SV=2
Length = 217
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGY 58
+SLQ V+A IW+ E+Y +TS+ G + ++Y + H ++V R +E
Sbjct: 54 RSLQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELR 113
Query: 59 LRTRPAIIV---ANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILN 115
T P I+V NK DL AV + + K A + F+E S NV+ +L
Sbjct: 114 DHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLT 173
Query: 116 QI-RL--KRSLVQTGGAQAAAPWK 136
QI R+ KRS V+ G + P K
Sbjct: 174 QIYRIVSKRS-VEAGDDAGSGPGK 196
>sp|P22280|RAS3_MUCCL Ras-like protein 3 OS=Mucor circinelloides f. lusitanicus GN=RAS3
PE=2 SV=1
Length = 205
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 63 PAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRL--K 120
P ++V NK DL R VSSQ+ ++LA SF F E S VD+ ++ +IR K
Sbjct: 116 PMVLVGNKCDLEGDRQVSSQEGRDLAKSFGCPFSETSAKQRIRVDDTFYEVVREIRRMNK 175
Query: 121 RSLVQTGGAQAAAPWKSNT 139
++ G Q A S+T
Sbjct: 176 EQEGRSKGGQREAFEMSDT 194
>sp|P15064|RASG_DICDI Ras-like protein rasG OS=Dictyostelium discoideum GN=rasG PE=1 SV=1
Length = 189
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 63 PAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIR 118
P I+V NK DL R V++ + ++LA SF F+E S I NV+E ++ +IR
Sbjct: 110 PMIVVGNKCDLESDRQVTTGEGQDLAKSFGSPFLETSAKIRVNVEEAFYSLVREIR 165
>sp|P22279|RAS2_MUCCL Ras-like protein 2 OS=Mucor circinelloides f. lusitanicus GN=RAS2
PE=2 SV=2
Length = 198
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 31 GLIIVWMLYKPSYHRVEQDVIRLHEE----GYLRTRPAIIVANKIDLARARAVSSQDAKN 86
G ++++ + SYH EQ V +LHE+ L P ++V NK DL + R V + ++
Sbjct: 85 GFVLIYSI--TSYHTFEQ-VQKLHEQIARVKDLEHFPMVLVGNKCDLEQDRQVPTSAGRD 141
Query: 87 LAASFKVKFIEVSVGIHHNVDELLVGILNQIR 118
LA + +F E S + + + G++ +IR
Sbjct: 142 LAKQYNCQFFEASAKQNVRIQDAFHGLVREIR 173
>sp|Q8HZJ5|RB27B_BOVIN Ras-related protein Rab-27B OS=Bos taurus GN=RAB27B PE=2 SV=3
Length = 218
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 7 GHSGKVRAIIWN----EQYEKLTSS---DETGLIIVWMLY-KPSYHRVEQDVIRLHEEGY 58
G + KV +W+ E++ LT++ D G ++++ L + S+ V + +L Y
Sbjct: 63 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122
Query: 59 LRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQI- 117
+++ NK DL R V+ + A++LA + + + E S NV++ + +L+ I
Sbjct: 123 CENPDIVLIGNKADLPDQREVNERQARDLAEKYSIPYFETSAATGQNVEKAVETLLDLIM 182
Query: 118 -RLKRSLVQT 126
R+++ + +T
Sbjct: 183 KRMEQCVEKT 192
>sp|P11233|RALA_HUMAN Ras-related protein Ral-A OS=Homo sapiens GN=RALA PE=1 SV=1
Length = 206
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 48 QDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVD 107
+ ++R+ E+ + P ++V NK DL R VS ++AKN A + V ++E S NVD
Sbjct: 109 EQILRVKEDENV---PFLLVGNKSDLEDKRQVSVEEAKNRAEQWNVNYVETSAKTRANVD 165
Query: 108 ELLVGILNQIRLKR 121
++ ++ +IR ++
Sbjct: 166 KVFFDLMREIRARK 179
>sp|P70426|RIT1_MOUSE GTP-binding protein Rit1 OS=Mus musculus GN=Rit1 PE=1 SV=1
Length = 219
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 31 GLIIVWMLY-KPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAA 89
G II + + + S+H V + ++ P ++V NK DL + R VS ++ +LA
Sbjct: 95 GFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVSKEEGLSLAR 154
Query: 90 SFKVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQAAAPWKS 137
F F E S + +D++ ++ +IR K + + A P S
Sbjct: 155 EFSCPFFETSAAYRYYIDDVFHALVREIRKKEKELVLAMEKKAKPKNS 202
>sp|Q92930|RAB8B_HUMAN Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2
Length = 207
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDV---IRLHE 55
++++ K++ IW+ E++ +T++ G + + ++Y + + ++ IR E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 56 EGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILN 115
E +I+ NK D+ R VS + + LA + +KF+E S NV+E +
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLAR 167
Query: 116 QI--RLKRSLVQTGGAQAAAPWK 136
I +L R + + A A P K
Sbjct: 168 DIMTKLNRKMNDSNSAGAGGPVK 190
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,236,052
Number of Sequences: 539616
Number of extensions: 3271435
Number of successful extensions: 9822
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 139
Number of HSP's that attempted gapping in prelim test: 9353
Number of HSP's gapped (non-prelim): 591
length of query: 238
length of database: 191,569,459
effective HSP length: 114
effective length of query: 124
effective length of database: 130,053,235
effective search space: 16126601140
effective search space used: 16126601140
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)