Your job contains 1 sequence.
>psy14042
MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGYLR
TRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLK
RSLVQTGGAQAAAPWKSNTTLVRASAVIVGSVDGNRIWGKEFKKTSMLGVQWTSDSQNLL
FAIKGGQVHLYDYEGNFMNKVSMWSGPGSEMGEIAALKYYLNRTSARSLNKFEGCPSV
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14042
(238 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-060810-148 - symbol:wdr35 "WD repeat domain... 193 2.0e-29 2
UNIPROTKB|Q9P2L0 - symbol:WDR35 "WD repeat-containing pro... 181 2.1e-28 2
RGD|1564116 - symbol:Wdr35 "WD repeat domain 35" species:... 179 5.5e-28 2
MGI|MGI:1921932 - symbol:Wdr35 "WD repeat domain 35" spec... 179 5.7e-28 2
UNIPROTKB|E1BWD7 - symbol:WDR35 "Uncharacterized protein"... 184 1.9e-27 2
UNIPROTKB|F1SCU2 - symbol:WDR35 "Uncharacterized protein"... 179 3.4e-26 2
FB|FBgn0035264 - symbol:Oseg4 "Oseg4" species:7227 "Droso... 190 1.2e-25 2
FB|FBgn0085426 - symbol:Rgk3 "Rad, Gem/Kir family member ... 276 9.3e-24 1
FB|FBgn0085419 - symbol:Rgk2 "Rad, Gem/Kir family member ... 227 8.4e-18 1
UNIPROTKB|Q8IYK8 - symbol:REM2 "GTP-binding protein REM 2... 169 2.4e-11 1
RGD|69081 - symbol:Rem2 "RAS (RAD and GEM) like GTP bindi... 169 2.4e-11 1
UNIPROTKB|F1NUA6 - symbol:REM1 "Uncharacterized protein" ... 153 4.5e-11 1
UNIPROTKB|E1BPW7 - symbol:REM2 "Uncharacterized protein" ... 167 5.5e-11 1
MGI|MGI:2155260 - symbol:Rem2 "rad and gem related GTP bi... 165 1.2e-10 1
ZFIN|ZDB-GENE-060825-251 - symbol:gem "GTP binding protei... 163 1.4e-10 1
UNIPROTKB|E2QY62 - symbol:REM2 "Uncharacterized protein" ... 162 3.4e-10 1
UNIPROTKB|F1NW22 - symbol:RRAD "Uncharacterized protein" ... 156 1.4e-09 1
ZFIN|ZDB-GENE-030131-5607 - symbol:rrad "Ras-related asso... 156 1.5e-09 1
UNIPROTKB|F1P6W5 - symbol:RRAD "Uncharacterized protein" ... 156 1.6e-09 1
RGD|1564487 - symbol:Tulp4 "tubby like protein 4" species... 113 1.6e-09 2
FB|FBgn0260658 - symbol:CG42541 species:7227 "Drosophila ... 162 3.2e-09 1
UNIPROTKB|F1MMK7 - symbol:RRAD "Uncharacterized protein" ... 153 4.1e-09 1
UNIPROTKB|P55042 - symbol:RRAD "GTP-binding protein RAD" ... 153 4.1e-09 1
MGI|MGI:1930943 - symbol:Rrad "Ras-related associated wit... 153 4.1e-09 1
MGI|MGI:99844 - symbol:Gem "GTP binding protein (gene ove... 152 4.7e-09 1
RGD|1307386 - symbol:Gem "GTP binding protein overexpress... 152 4.7e-09 1
UNIPROTKB|A4IFA1 - symbol:GEM "Uncharacterized protein" s... 152 4.8e-09 1
UNIPROTKB|J9P6J7 - symbol:GEM "Uncharacterized protein" s... 152 4.8e-09 1
UNIPROTKB|P55040 - symbol:GEM "GTP-binding protein GEM" s... 152 4.8e-09 1
UNIPROTKB|F1RY45 - symbol:GEM "Uncharacterized protein" s... 152 4.8e-09 1
ZFIN|ZDB-GENE-040317-1 - symbol:rem1 "rad and gem related... 152 4.9e-09 1
RGD|69357 - symbol:Rrad "Ras-related associated with diab... 151 7.4e-09 1
UNIPROTKB|P55043 - symbol:Rrad "GTP-binding protein RAD" ... 151 7.4e-09 1
UNIPROTKB|E1BH25 - symbol:TULP4 "Uncharacterized protein"... 113 8.0e-09 2
UNIPROTKB|F1P9V3 - symbol:TULP4 "Uncharacterized protein"... 113 8.9e-09 2
UNIPROTKB|F1P5M4 - symbol:GEM "Uncharacterized protein" s... 150 8.9e-09 1
UNIPROTKB|Q9NRJ4 - symbol:TULP4 "Tubby-related protein 4"... 113 9.0e-09 2
MGI|MGI:1916092 - symbol:Tulp4 "tubby like protein 4" spe... 113 9.0e-09 2
UNIPROTKB|J9P1J3 - symbol:TULP4 "Uncharacterized protein"... 113 9.0e-09 2
MGI|MGI:1097696 - symbol:Rem1 "rad and gem related GTP bi... 149 1.2e-08 1
RGD|1306560 - symbol:Rem1 "RAS (RAD and GEM)-like GTP-bin... 149 1.2e-08 1
UNIPROTKB|J9NWX9 - symbol:REM1 "Uncharacterized protein" ... 148 1.6e-08 1
UNIPROTKB|F1PQQ4 - symbol:REM1 "Uncharacterized protein" ... 148 1.9e-08 1
UNIPROTKB|I3L820 - symbol:RRAD "Uncharacterized protein" ... 144 2.1e-08 1
UNIPROTKB|O75628 - symbol:REM1 "GTP-binding protein REM 1... 147 2.2e-08 1
UNIPROTKB|Q29RP3 - symbol:REM1 "Uncharacterized protein" ... 146 3.0e-08 1
ZFIN|ZDB-GENE-060503-215 - symbol:tulp4 "tubby like prote... 112 4.0e-08 2
UNIPROTKB|F1SES8 - symbol:F1SES8 "Uncharacterized protein... 145 4.1e-08 1
FB|FBgn0039530 - symbol:Tusp "Tusp" species:7227 "Drosoph... 106 1.6e-07 2
ZFIN|ZDB-GENE-081110-1 - symbol:rem2 "RAS (RAD and GEM)-l... 137 4.2e-07 1
TAIR|locus:2202280 - symbol:ARA-2 species:3702 "Arabidops... 129 1.2e-06 1
ASPGD|ASPL0000059035 - symbol:rasA species:162425 "Emeric... 126 2.7e-06 1
DICTYBASE|DDB_G0269238 - symbol:rab11A "Rab GTPase" speci... 125 3.8e-06 1
TAIR|locus:2124092 - symbol:RABA1d "RAB GTPase homolog A1... 124 5.0e-06 1
WB|WBGene00016935 - symbol:ifta-1 species:6239 "Caenorhab... 115 5.9e-06 2
ASPGD|ASPL0000062894 - symbol:srgE species:162425 "Emeric... 123 6.2e-06 1
TAIR|locus:2086290 - symbol:RABA1g "RAB GTPase homolog A1... 123 7.3e-06 1
MGI|MGI:108054 - symbol:Rit2 "Ras-like without CAAX 2" sp... 122 9.6e-06 1
TAIR|locus:2159285 - symbol:RABA1f "RAB GTPase homolog A1... 122 9.6e-06 1
ZFIN|ZDB-GENE-041212-69 - symbol:rab25a "RAB25, member RA... 121 1.1e-05 1
WB|WBGene00013124 - symbol:Y52B11A.4 species:6239 "Caenor... 128 1.1e-05 1
ZFIN|ZDB-GENE-120215-85 - symbol:si:ch1073-112i17.1 "si:c... 118 3.5e-05 1
RGD|1307654 - symbol:Rit2 "Ras-like without CAAX 2" speci... 116 5.3e-05 1
UNIPROTKB|Q96HU8 - symbol:DIRAS2 "GTP-binding protein Di-... 114 6.7e-05 1
POMBASE|SPAC18G6.03 - symbol:ypt3 "GTPase Ypt3" species:4... 115 6.9e-05 1
TAIR|locus:504954951 - symbol:AT5G46025 species:3702 "Ara... 99 7.4e-05 1
ZFIN|ZDB-GENE-050706-113 - symbol:rab25b "RAB25, member R... 114 8.4e-05 1
TAIR|locus:2171943 - symbol:RABA1c "RAB GTPase homolog A1... 114 9.3e-05 1
SGD|S000003178 - symbol:YPT32 "Rab family GTPase involved... 114 0.00010 1
RGD|1559874 - symbol:Rit1 "Ras-like without CAAX 1" speci... 112 0.00010 1
DICTYBASE|DDB_G0292998 - symbol:rasB "Ras GTPase" species... 112 0.00012 1
WB|WBGene00004285 - symbol:rab-37 species:6239 "Caenorhab... 113 0.00014 1
ZFIN|ZDB-GENE-070912-329 - symbol:rit1 "Ras-like without ... 112 0.00015 1
WB|WBGene00022139 - symbol:tub-2 species:6239 "Caenorhabd... 92 0.00015 2
MGI|MGI:1915453 - symbol:Diras2 "DIRAS family, GTP-bindin... 111 0.00016 1
RGD|1305580 - symbol:Diras2 "DIRAS family, GTP-binding RA... 111 0.00016 1
UNIPROTKB|Q8HZJ5 - symbol:RAB27B "Ras-related protein Rab... 112 0.00017 1
TAIR|locus:2018698 - symbol:RABA1i "RAB GTPase homolog A1... 112 0.00017 1
MGI|MGI:108053 - symbol:Rit1 "Ras-like without CAAX 1" sp... 112 0.00017 1
UNIPROTKB|F1PH82 - symbol:RIT2 "Uncharacterized protein" ... 111 0.00019 1
UNIPROTKB|E1C6J7 - symbol:RAB17 "Uncharacterized protein"... 111 0.00021 1
UNIPROTKB|C9J8Q6 - symbol:MRAS "Ras-related protein M-Ras... 95 0.00021 1
UNIPROTKB|Q6PJZ0 - symbol:RAB17 "RAB17 protein" species:9... 95 0.00021 1
UNIPROTKB|F1RN13 - symbol:LOC100739440 "Uncharacterized p... 110 0.00021 1
UNIPROTKB|I3LCQ9 - symbol:KRAS "Uncharacterized protein" ... 111 0.00022 1
UNIPROTKB|J9NUC1 - symbol:RIT2 "Uncharacterized protein" ... 111 0.00022 1
UNIPROTKB|Q3MHP2 - symbol:RAB11B "Ras-related protein Rab... 111 0.00022 1
UNIPROTKB|J9JHN1 - symbol:RAB11B "Uncharacterized protein... 111 0.00022 1
UNIPROTKB|Q15907 - symbol:RAB11B "Ras-related protein Rab... 111 0.00022 1
UNIPROTKB|F2Z5J9 - symbol:RAB11B "Uncharacterized protein... 111 0.00022 1
MGI|MGI:99425 - symbol:Rab11b "RAB11B, member RAS oncogen... 111 0.00022 1
RGD|620114 - symbol:Rab27b "RAB27B, member RAS oncogene f... 111 0.00022 1
RGD|68369 - symbol:Rab11b "RAB11B, member RAS oncogene fa... 111 0.00022 1
UNIPROTKB|P11233 - symbol:RALA "Ras-related protein Ral-A... 110 0.00024 1
UNIPROTKB|E1C880 - symbol:RIT2 "Uncharacterized protein" ... 110 0.00029 1
UNIPROTKB|Q99578 - symbol:RIT2 "GTP-binding protein Rit2"... 110 0.00029 1
UNIPROTKB|Q5F3R8 - symbol:RAB11B "Uncharacterized protein... 110 0.00029 1
UNIPROTKB|E2R5L5 - symbol:RAB27B "Uncharacterized protein... 110 0.00029 1
MGI|MGI:1931295 - symbol:Rab27b "RAB27b, member RAS oncog... 110 0.00029 1
ZFIN|ZDB-GENE-040426-2860 - symbol:rab11ba "RAB11B, membe... 110 0.00029 1
WARNING: Descriptions of 39 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-060810-148 [details] [associations]
symbol:wdr35 "WD repeat domain 35" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-060810-148
Gene3D:2.130.10.10 SUPFAM:SSF50978 GeneTree:ENSGT00610000085970
CTD:57539 eggNOG:NOG263340 HOGENOM:HOG000255527 HOVERGEN:HBG079343
OMA:DENHPQE OrthoDB:EOG43FGW3 InterPro:IPR017233 PIRSF:PIRSF037536
EMBL:AL935163 IPI:IPI00832855 RefSeq:NP_001139061.1
UniGene:Dr.87936 Ensembl:ENSDART00000100663 GeneID:565515
KEGG:dre:565515 NextBio:20885926 Uniprot:B7ZD88
Length = 1203
Score = 193 (73.0 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 146 AVIVGSVDGNRIWGKEFKKTSMLGVQWTSDSQNLLFAIKGGQVHLYDYEGNFMNKVSM 203
AVIVGSVDGNRIWGKE K T + V W+ DS+ LLF + G++H+YD +GNF+ K+SM
Sbjct: 138 AVIVGSVDGNRIWGKELKGTQLAHVAWSPDSKILLFGMANGEIHIYDNQGNFIMKMSM 195
Score = 176 (67.0 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 30/44 (68%), Positives = 39/44 (88%)
Query: 1 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKPSYH 44
MNQ+L+GHSG V+ + WNEQY+KLT+SD+ GLIIVWMLYK S++
Sbjct: 63 MNQTLEGHSGAVQVVTWNEQYQKLTTSDQNGLIIVWMLYKGSWY 106
Score = 40 (19.1 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 7/45 (15%), Positives = 25/45 (55%)
Query: 149 VGSVDGNRIWG--KEFKKTSMLGVQWTSDSQNLLFAIKGGQVHLY 191
+G +G G +F++ + ++W +D+ +L ++ +++++
Sbjct: 598 MGDAEGGSTAGDPSKFERKDVWDMKWANDNPDLFSMMEKTRMYVF 642
Score = 38 (18.4 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 12 VRAIIWNEQYEKLTSSDETGLIIV 35
VR++ WN K+ E G +IV
Sbjct: 118 VRSMSWNADGLKICIVYEDGAVIV 141
>UNIPROTKB|Q9P2L0 [details] [associations]
symbol:WDR35 "WD repeat-containing protein 35" species:9606
"Homo sapiens" [GO:0030991 "intraflagellar transport particle A"
evidence=IDA] [GO:0042384 "cilium assembly" evidence=IMP]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0035085 "cilium axoneme"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005813 EMBL:CH471053
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005932
GO:GO:0042384 GO:GO:0035085 Orphanet:1515 Orphanet:93271
EMBL:AC079145 EMBL:AB037757 EMBL:AK122917 EMBL:BC036659
IPI:IPI00165984 IPI:IPI00172480 RefSeq:NP_001006658.1
RefSeq:NP_065830.2 UniGene:Hs.205427 ProteinModelPortal:Q9P2L0
SMR:Q9P2L0 IntAct:Q9P2L0 STRING:Q9P2L0 PhosphoSite:Q9P2L0
DMDM:48474987 PaxDb:Q9P2L0 PRIDE:Q9P2L0 Ensembl:ENST00000281405
Ensembl:ENST00000345530 GeneID:57539 KEGG:hsa:57539 UCSC:uc002rdi.3
UCSC:uc002rdj.3 CTD:57539 GeneCards:GC02M020110 HGNC:HGNC:29250
HPA:HPA044147 MIM:613602 MIM:613610 MIM:614091 neXtProt:NX_Q9P2L0
PharmGKB:PA134928987 eggNOG:NOG263340 HOGENOM:HOG000255527
HOVERGEN:HBG079343 InParanoid:Q9P2L0 OMA:DENHPQE OrthoDB:EOG43FGW3
PhylomeDB:Q9P2L0 GenomeRNAi:57539 NextBio:63968 ArrayExpress:Q9P2L0
Bgee:Q9P2L0 CleanEx:HS_WDR35 Genevestigator:Q9P2L0
GermOnline:ENSG00000118965 InterPro:IPR017233 PIRSF:PIRSF037536
Uniprot:Q9P2L0
Length = 1181
Score = 181 (68.8 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 146 AVIVGSVDGNRIWGKEFKKTSMLGVQWTSDSQNLLFAIKGGQVHLYDYEGNFMNKVSM 203
AVIVGSVDGNRIWGK+ K + V W++DS+ LLF + G++H+YD +GNFM K+ +
Sbjct: 138 AVIVGSVDGNRIWGKDLKGIQLSHVTWSADSKVLLFGMANGEIHIYDNQGNFMIKMKL 195
Score = 178 (67.7 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 1 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKPSY 43
MNQ+L+GHSG V+ + WNEQY+KLT+SDE GLIIVWMLYK S+
Sbjct: 63 MNQTLEGHSGSVQVVTWNEQYQKLTTSDENGLIIVWMLYKGSW 105
Score = 44 (20.5 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 164 KTSMLGVQWTSDSQNLLFAIKGGQVHLYDYEGN 196
K+ + + W +D Q + + G V + +GN
Sbjct: 115 KSVVRSMSWNADGQKICIVYEDGAVIVGSVDGN 147
Score = 43 (20.2 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 12 VRAIIWNEQYEKLTSSDETGLIIV 35
VR++ WN +K+ E G +IV
Sbjct: 118 VRSMSWNADGQKICIVYEDGAVIV 141
Score = 40 (19.1 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 11 KVRAIIWNEQYEKLTSSDETGLIIVWML 38
K++ + WN++ + E GL+ V L
Sbjct: 16 KLQCVSWNKEQGFIACGGEDGLLKVLKL 43
Score = 36 (17.7 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 103 HHNVDELLVGILNQIRLKRSLVQTGGAQAAA 133
H N D L+ + +R R+L++ G + A+
Sbjct: 657 HPNKDYLINFEIRSLRDSRALIEKVGIKDAS 687
>RGD|1564116 [details] [associations]
symbol:Wdr35 "WD repeat domain 35" species:10116 "Rattus
norvegicus" [GO:0005813 "centrosome" evidence=ISO;ISS] [GO:0005932
"microtubule basal body" evidence=ISO;ISS] [GO:0030991
"intraflagellar transport particle A" evidence=ISO;ISS] [GO:0035085
"cilium axoneme" evidence=ISO;ISS] [GO:0042384 "cilium assembly"
evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005813 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005932 GO:GO:0042384
GO:GO:0035085 EMBL:CH473947 eggNOG:NOG263340 HOGENOM:HOG000255527
HOVERGEN:HBG079343 InterPro:IPR017233 PIRSF:PIRSF037536
EMBL:EF613262 IPI:IPI00854039 RefSeq:NP_001092810.1
UniGene:Rn.14574 ProteinModelPortal:A6N6J5 GeneID:503018
KEGG:rno:503018 CTD:503018 RGD:1306545 NextBio:713094
Genevestigator:A6N6J5 Uniprot:A6N6J5
Length = 1170
Score = 179 (68.1 bits), Expect = 5.5e-28, Sum P(2) = 5.5e-28
Identities = 31/58 (53%), Positives = 44/58 (75%)
Query: 146 AVIVGSVDGNRIWGKEFKKTSMLGVQWTSDSQNLLFAIKGGQVHLYDYEGNFMNKVSM 203
AVIVGSVDGNRIWGK+ K + V W++DS+ LLF + G++H+YD +GNF+ K+ +
Sbjct: 138 AVIVGSVDGNRIWGKDLKGIQLCHVTWSADSKILLFGMANGEIHIYDNQGNFIMKMKL 195
Score = 176 (67.0 bits), Expect = 5.5e-28, Sum P(2) = 5.5e-28
Identities = 30/44 (68%), Positives = 39/44 (88%)
Query: 1 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKPSYH 44
MNQ+L+GHSG V+ + WNEQY+KLT+SD+ GLIIVWMLYK S++
Sbjct: 63 MNQNLEGHSGAVQVVTWNEQYQKLTTSDQNGLIIVWMLYKGSWY 106
Score = 43 (20.2 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 12 VRAIIWNEQYEKLTSSDETGLIIV 35
VR++ WN +K+ E G +IV
Sbjct: 118 VRSMSWNADGQKICIVYEDGAVIV 141
Score = 40 (19.1 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 11 KVRAIIWNEQYEKLTSSDETGLIIVWML 38
K++ I WN+ + E GL+ V L
Sbjct: 16 KLKCISWNKDQGFIACGGEDGLLKVLRL 43
Score = 36 (17.7 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 11/44 (25%), Positives = 19/44 (43%)
Query: 150 GSVDGNRIWGKEFKKTSMLGVQWTSDSQNLLFAIKGGQVHLYDY 193
GSVDG + K + T T+ + L+ + G + Y +
Sbjct: 477 GSVDGVFDYSKAIQGTRDPICAITASDKTLIVGRESGVIQRYSF 520
>MGI|MGI:1921932 [details] [associations]
symbol:Wdr35 "WD repeat domain 35" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0030991 "intraflagellar transport particle A" evidence=ISO]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=ISO;IMP] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921932 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005932 GO:GO:0042384
GO:GO:0035085 GeneTree:ENSGT00610000085970 CTD:57539
eggNOG:NOG263340 HOGENOM:HOG000255527 HOVERGEN:HBG079343
OMA:DENHPQE InterPro:IPR017233 PIRSF:PIRSF037536 EMBL:AK029896
EMBL:AK083971 EMBL:AC110376 EMBL:BC056925 IPI:IPI00318154
IPI:IPI01007988 RefSeq:NP_001152999.1 RefSeq:NP_766058.3
UniGene:Mm.87389 ProteinModelPortal:Q8BND3 SMR:Q8BND3
PhosphoSite:Q8BND3 PaxDb:Q8BND3 PRIDE:Q8BND3
Ensembl:ENSMUST00000085745 Ensembl:ENSMUST00000111113 GeneID:74682
KEGG:mmu:74682 UCSC:uc007naj.2 UCSC:uc007nak.2 InParanoid:Q8BND3
NextBio:341374 Bgee:Q8BND3 CleanEx:MM_WDR35 Genevestigator:Q8BND3
GermOnline:ENSMUSG00000066643 Uniprot:Q8BND3
Length = 1181
Score = 179 (68.1 bits), Expect = 5.7e-28, Sum P(2) = 5.7e-28
Identities = 31/58 (53%), Positives = 44/58 (75%)
Query: 146 AVIVGSVDGNRIWGKEFKKTSMLGVQWTSDSQNLLFAIKGGQVHLYDYEGNFMNKVSM 203
AVIVGSVDGNRIWGK+ K + V W++DS+ LLF + G++H+YD +GNF+ K+ +
Sbjct: 138 AVIVGSVDGNRIWGKDLKGIQLCHVTWSADSKILLFGMANGEIHIYDNQGNFIMKMKL 195
Score = 176 (67.0 bits), Expect = 5.7e-28, Sum P(2) = 5.7e-28
Identities = 30/44 (68%), Positives = 39/44 (88%)
Query: 1 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKPSYH 44
MNQ+L+GHSG V+ + WNEQY+KLT+SD+ GLIIVWMLYK S++
Sbjct: 63 MNQNLEGHSGAVQVVTWNEQYQKLTTSDQNGLIIVWMLYKGSWY 106
Score = 43 (20.2 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 12 VRAIIWNEQYEKLTSSDETGLIIV 35
VR++ WN +K+ E G +IV
Sbjct: 118 VRSMSWNADGQKICIVYEDGAVIV 141
Score = 40 (19.1 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 11 KVRAIIWNEQYEKLTSSDETGLIIVWML 38
K++ I WN+ + E GL+ V L
Sbjct: 16 KLKCISWNKDQGFIACGGEDGLLKVLRL 43
Score = 36 (17.7 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 11/44 (25%), Positives = 19/44 (43%)
Query: 150 GSVDGNRIWGKEFKKTSMLGVQWTSDSQNLLFAIKGGQVHLYDY 193
GSVDG + K + T T+ + L+ + G + Y +
Sbjct: 488 GSVDGVFDYSKAIQGTRDPICAITASDKTLIVGRESGVIQRYSF 531
>UNIPROTKB|E1BWD7 [details] [associations]
symbol:WDR35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005813 "centrosome" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0035085 "cilium axoneme"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR016024 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 SUPFAM:SSF48371 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005932 GO:GO:0035085
GeneTree:ENSGT00610000085970 OMA:DENHPQE InterPro:IPR017233
PIRSF:PIRSF037536 EMBL:AADN02018563 IPI:IPI00591631
Ensembl:ENSGALT00000026583 Uniprot:E1BWD7
Length = 1180
Score = 184 (69.8 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 146 AVIVGSVDGNRIWGKEFKKTSMLGVQWTSDSQNLLFAIKGGQVHLYDYEGNFMNKVSM 203
AVIVGSVDGNRIWGK+ K T + V W+SDS+ LLF + G++H+YD GNF+ K+ +
Sbjct: 140 AVIVGSVDGNRIWGKDLKGTHLCHVAWSSDSKVLLFGMANGEIHIYDSNGNFIVKMKL 197
Score = 166 (63.5 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 27/44 (61%), Positives = 38/44 (86%)
Query: 1 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKPSYH 44
MNQ+L+GHSG V+ + WNEQY KLT+SD+ GLIIVW++YK +++
Sbjct: 65 MNQTLEGHSGSVQVVTWNEQYHKLTTSDQNGLIIVWIIYKGAWY 108
Score = 44 (20.5 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 164 KTSMLGVQWTSDSQNLLFAIKGGQVHLYDYEGN 196
K+ + + W +D Q + + G V + +GN
Sbjct: 117 KSVVRSMSWNADGQKICIVYEDGAVIVGSVDGN 149
Score = 43 (20.2 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 12 VRAIIWNEQYEKLTSSDETGLIIV 35
VR++ WN +K+ E G +IV
Sbjct: 120 VRSMSWNADGQKICIVYEDGAVIV 143
Score = 39 (18.8 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 11 KVRAIIWNEQYEKLTSSDETGLIIVWML 38
++R I WN+ + E GL+ V L
Sbjct: 16 RLRCISWNKDEGFIACGGEDGLLKVLKL 43
Score = 38 (18.4 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 150 GSVDGNRIWGKEFKKTSMLGVQWTSDSQNLLFAIKGGQVHLY 191
GS DG+ + K + T T+ + LL + G +H Y
Sbjct: 490 GSGDGHLDYSKAVEGTRDPICAITASDKILLVGRESGTIHRY 531
>UNIPROTKB|F1SCU2 [details] [associations]
symbol:WDR35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR016024 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 SUPFAM:SSF48371 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005932 GO:GO:0042384 GO:GO:0035085
GeneTree:ENSGT00610000085970 OMA:DENHPQE InterPro:IPR017233
PIRSF:PIRSF037536 EMBL:CU463914 Ensembl:ENSSSCT00000009415
Uniprot:F1SCU2
Length = 1186
Score = 179 (68.1 bits), Expect = 3.4e-26, Sum P(2) = 3.4e-26
Identities = 31/58 (53%), Positives = 44/58 (75%)
Query: 146 AVIVGSVDGNRIWGKEFKKTSMLGVQWTSDSQNLLFAIKGGQVHLYDYEGNFMNKVSM 203
AVIVGSVDGNRIWGK+ K + V W++DS+ LLF + G++H+YD +GNF+ K+ +
Sbjct: 142 AVIVGSVDGNRIWGKDLKGIQLCHVAWSADSKILLFGMANGEIHIYDNQGNFIMKMKL 199
Score = 159 (61.0 bits), Expect = 3.4e-26, Sum P(2) = 3.4e-26
Identities = 27/38 (71%), Positives = 34/38 (89%)
Query: 1 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWML 38
MNQ+L+GHSG V+ + WNEQY+KLT+SD+ GLIIVWML
Sbjct: 63 MNQTLEGHSGSVQVVTWNEQYQKLTTSDQNGLIIVWML 100
Score = 44 (20.5 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 164 KTSMLGVQWTSDSQNLLFAIKGGQVHLYDYEGN 196
K+ + + W +D Q + + G V + +GN
Sbjct: 119 KSVVRSMSWNADGQKICIVYEDGAVIVGSVDGN 151
Score = 43 (20.2 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 12 VRAIIWNEQYEKLTSSDETGLIIV 35
VR++ WN +K+ E G +IV
Sbjct: 122 VRSMSWNADGQKICIVYEDGAVIV 145
Score = 40 (19.1 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 11 KVRAIIWNEQYEKLTSSDETGLIIVWML 38
K++ I WN+ + E GL+ V L
Sbjct: 16 KLKCISWNKDQGFIACGGEDGLLKVLKL 43
>FB|FBgn0035264 [details] [associations]
symbol:Oseg4 "Oseg4" species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0042384 "cilium
assembly" evidence=ISM;IEP] [GO:0035058 "nonmotile primary cilium
assembly" evidence=ISS] [GO:0031513 "nonmotile primary cilium"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011990
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 Gene3D:1.25.40.10 GO:GO:0035058
GeneTree:ENSGT00610000085970 eggNOG:NOG263340 OMA:DENHPQE
InterPro:IPR017233 PIRSF:PIRSF037536 EMBL:AY061373
RefSeq:NP_647653.1 UniGene:Dm.12583 SMR:Q9W097 MINT:MINT-748327
EnsemblMetazoa:FBtr0072797 EnsemblMetazoa:FBtr0334077 GeneID:38219
KEGG:dme:Dmel_CG2069 UCSC:CG2069-RA CTD:38219 FlyBase:FBgn0035264
InParanoid:Q9W097 OrthoDB:EOG4V15FM ChiTaRS:Oseg4 GenomeRNAi:38219
NextBio:807582 Uniprot:Q9W097
Length = 1205
Score = 190 (71.9 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 43/102 (42%), Positives = 63/102 (61%)
Query: 131 AAAPWKSNTTLV----RASAVIVGSVDGNRIWGKEFKKTSMLGVQWTSDSQNLLFAIKGG 186
A+ W S+ + + A+IVGSVDGNRI+GKE K T + GVQW+ D++ +LFA+ G
Sbjct: 120 ASMSWTSDGSRICIVYEDGAIIVGSVDGNRIFGKELKGTHLTGVQWSPDNRLILFALANG 179
Query: 187 QVHLYDYEGNFMNKVSMW----SGPGSEMGE-IAALKYYLNR 223
+ HLYD +GNF K+ + SG S G IA++ ++ R
Sbjct: 180 ECHLYDNQGNFAMKLHIQCVNISGGSSSRGHRIASICWFSGR 221
Score = 143 (55.4 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 1 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKPSYH 44
MNQ+L GH VR + WN+ +KLTSSD G+I+VWMLYK S++
Sbjct: 64 MNQTLDGHKESVRVVTWNDAQQKLTSSDTDGVIMVWMLYKGSWY 107
Score = 55 (24.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 163 KKTSMLGVQWTSDSQNLLFAIKGGQVHLYDYEGN 196
KK+++ + WTSD + + G + + +GN
Sbjct: 115 KKSTVASMSWTSDGSRICIVYEDGAIIVGSVDGN 148
>FB|FBgn0085426 [details] [associations]
symbol:Rgk3 "Rad, Gem/Kir family member 3" species:7227
"Drosophila melanogaster" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IEA]
InterPro:IPR001806 InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449
PROSITE:PS51421 EMBL:AE013599 GO:GO:0005525 GO:GO:0007264
GO:GO:0016020 GO:GO:0003924 PANTHER:PTHR24070
GeneTree:ENSGT00700000104060 RefSeq:NP_001097395.1 UniGene:Dm.25813
ProteinModelPortal:A8DYK6 SMR:A8DYK6 EnsemblMetazoa:FBtr0112646
GeneID:5740446 KEGG:dme:Dmel_CG34397 UCSC:CG34397-RC CTD:5740446
FlyBase:FBgn0085426 eggNOG:NOG290112 InParanoid:A8DYK6 OMA:SSECINA
OrthoDB:EOG4B2RDB PhylomeDB:A8DYK6 GenomeRNAi:5740446
NextBio:20891484 Bgee:A8DYK6 Uniprot:A8DYK6
Length = 449
Score = 276 (102.2 bits), Expect = 9.3e-24, P = 9.3e-24
Identities = 66/145 (45%), Positives = 92/145 (63%)
Query: 5 LQGHSGKVRAIIWN-EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRP 63
L G +++ + N E ++L +D L++ + K S+ R +Q + RL + LR RP
Sbjct: 279 LNGTESELKFLTGNPESKDELEQADAF-LVVYSCIDKESFTRAKQILSRLQDMDLLRHRP 337
Query: 64 AIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRSL 123
I+VANKIDLAR+RAVS+QD K +A +F KFIEVSVGI+HN DELL G L QIRLK+
Sbjct: 338 TILVANKIDLARSRAVSAQDGKCVACTFGAKFIEVSVGINHNCDELLAGTLTQIRLKKDQ 397
Query: 124 VQTGG---AQAAAPWKSNTTLVRAS 145
VQ G A + A W + +++ AS
Sbjct: 398 VQLQGPRDANSPAHWYKSRSVMLAS 422
>FB|FBgn0085419 [details] [associations]
symbol:Rgk2 "Rad, Gem/Kir family member 2" species:7227
"Drosophila melanogaster" [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001806 InterPro:IPR020849
Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421 EMBL:AE013599
GO:GO:0005525 GO:GO:0007264 GO:GO:0016020 GO:GO:0003924 HSSP:P01112
PANTHER:PTHR24070 KO:K07847 GeneTree:ENSGT00700000104060
EMBL:BT011477 RefSeq:NP_611342.1 UniGene:Dm.15909 SMR:Q6NN22
EnsemblMetazoa:FBtr0112633 GeneID:37132 KEGG:dme:Dmel_CG34390
UCSC:CG34390-RA CTD:37132 FlyBase:FBgn0085419 eggNOG:NOG262433
InParanoid:Q6NN22 OMA:NSRASER OrthoDB:EOG4ZPC9V GenomeRNAi:37132
NextBio:802108 Uniprot:Q6NN22
Length = 740
Score = 227 (85.0 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 49/98 (50%), Positives = 67/98 (68%)
Query: 24 LTSSDETGLIIVWMLYKPSYHRVEQDVIR-LHEEGYLRTRPAIIVANKIDLARARAVSSQ 82
L++ + G ++V+ + S RV +++I L +E Y + + I+V NK DLARAR ++SQ
Sbjct: 595 LSTYEPHGCVVVFSVVDRSSFRVAEEIINYLWQENYTKDKAVILVGNKADLARARLITSQ 654
Query: 83 DAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLK 120
+ K LAAS KFIE S GI HNVDELLVGIL Q+RLK
Sbjct: 655 EGKALAASRDAKFIETSSGIQHNVDELLVGILKQMRLK 692
>UNIPROTKB|Q8IYK8 [details] [associations]
symbol:REM2 "GTP-binding protein REM 2" species:9606 "Homo
sapiens" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] InterPro:IPR001806 InterPro:IPR020849
Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421 GO:GO:0005525
GO:GO:0005886 GO:GO:0007264 GO:GO:0003924 eggNOG:COG1100
InterPro:IPR025662 PANTHER:PTHR24070 HOGENOM:HOG000246961
HOVERGEN:HBG104899 InterPro:IPR017358 PIRSF:PIRSF038017
EMBL:AL135998 EMBL:AK096283 EMBL:BC035663 IPI:IPI00793200
RefSeq:NP_775798.2 UniGene:Hs.444911 PDB:3CBQ PDBsum:3CBQ
ProteinModelPortal:Q8IYK8 SMR:Q8IYK8 STRING:Q8IYK8
PhosphoSite:Q8IYK8 DMDM:290457655 PaxDb:Q8IYK8 PRIDE:Q8IYK8
Ensembl:ENST00000267396 GeneID:161253 KEGG:hsa:161253
UCSC:uc001whf.1 CTD:161253 GeneCards:GC14P023352 HGNC:HGNC:20248
neXtProt:NX_Q8IYK8 PharmGKB:PA134916581 InParanoid:Q8IYK8 KO:K07848
OMA:PAQKDGI OrthoDB:EOG43JC57 PhylomeDB:Q8IYK8 BRENDA:3.4.23.15
EvolutionaryTrace:Q8IYK8 GenomeRNAi:161253 NextBio:88040
ArrayExpress:Q8IYK8 Bgee:Q8IYK8 CleanEx:HS_REM2
Genevestigator:Q8IYK8 GermOnline:ENSG00000139890 Uniprot:Q8IYK8
Length = 340
Score = 169 (64.5 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 37/97 (38%), Positives = 55/97 (56%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
LI+ + + S+ +V + ++RL P I+V NK DLAR+R VS ++ ++LA +
Sbjct: 192 LIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVGNKSDLARSREVSLEEGRHLAGTL 251
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGG 128
K IE S +HHN EL G + QIRL+R GG
Sbjct: 252 SCKHIETSAALHHNTRELFEGAVRQIRLRRGRNHAGG 288
>RGD|69081 [details] [associations]
symbol:Rem2 "RAS (RAD and GEM) like GTP binding 2" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0016020 "membrane" evidence=IDA]
InterPro:IPR001806 InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449
PROSITE:PS51421 RGD:69081 GO:GO:0005525 GO:GO:0005886 GO:GO:0007264
GO:GO:0016020 GO:GO:0003924 eggNOG:COG1100 InterPro:IPR025662
PANTHER:PTHR24070 HOGENOM:HOG000246961 HOVERGEN:HBG104899
InterPro:IPR017358 PIRSF:PIRSF038017 GeneTree:ENSGT00700000104060
CTD:161253 KO:K07848 OMA:PAQKDGI OrthoDB:EOG43JC57 EMBL:AY916790
EMBL:AF084464 IPI:IPI00203485 RefSeq:NP_073176.2 UniGene:Rn.48804
PDB:4AII PDBsum:4AII ProteinModelPortal:Q9WTY2 SMR:Q9WTY2
PhosphoSite:Q9WTY2 PRIDE:Q9WTY2 Ensembl:ENSRNOT00000016020
GeneID:64626 KEGG:rno:64626 UCSC:RGD:69081 InParanoid:Q5D202
NextBio:613574 ArrayExpress:Q9WTY2 Genevestigator:Q9WTY2
GermOnline:ENSRNOG00000011646 Uniprot:Q9WTY2
Length = 341
Score = 169 (64.5 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 37/97 (38%), Positives = 55/97 (56%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
LI+ + + S+ +V + ++RL P I+V NK DLAR+R VS ++ ++LA +
Sbjct: 193 LIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVGNKSDLARSREVSLEEGRHLAGTL 252
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGG 128
K IE S +HHN EL G + QIRL+R GG
Sbjct: 253 SCKHIETSAALHHNTRELFEGAVRQIRLRRGRGHAGG 289
>UNIPROTKB|F1NUA6 [details] [associations]
symbol:REM1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR020849 Pfam:PF00071
PRINTS:PR00449 PROSITE:PS51421 GO:GO:0005525 GO:GO:0007264
GO:GO:0016020 GO:GO:0003924 PANTHER:PTHR24070 OMA:KLDESWS
GeneTree:ENSGT00700000104060 EMBL:AADN02019105 IPI:IPI00591509
ProteinModelPortal:F1NUA6 Ensembl:ENSGALT00000039372 Uniprot:F1NUA6
Length = 209
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 34/90 (37%), Positives = 49/90 (54%)
Query: 33 IIVWMLY-KPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
+IV+ + + S+ + I L P I+V NK DL R R VS ++ + A F
Sbjct: 71 VIVYSITDRSSFESASELRIHLRRARQAEDIPIILVGNKSDLVRCREVSIEEGRACAVVF 130
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKR 121
KFIE S + HNVDEL G++ Q+RL+R
Sbjct: 131 DCKFIETSAALQHNVDELFEGVVRQLRLRR 160
>UNIPROTKB|E1BPW7 [details] [associations]
symbol:REM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR020849 Pfam:PF00071
PRINTS:PR00449 PROSITE:PS51421 GO:GO:0005525 GO:GO:0007264
GO:GO:0016020 GO:GO:0003924 EMBL:DAAA02028045 InterPro:IPR025662
PROSITE:PS00675 PANTHER:PTHR24070 InterPro:IPR017358
PIRSF:PIRSF038017 GeneTree:ENSGT00700000104060 CTD:161253 KO:K07848
OMA:PAQKDGI IPI:IPI00685580 RefSeq:NP_001179637.1 UniGene:Bt.30417
Ensembl:ENSBTAT00000021784 GeneID:531597 KEGG:bta:531597
NextBio:20875490 Uniprot:E1BPW7
Length = 340
Score = 167 (63.8 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 37/97 (38%), Positives = 55/97 (56%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
LI+ + + S+ +V + ++RL P I+V NK DLAR+R VS ++ ++LA +
Sbjct: 192 LIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVGNKSDLARSREVSLEEGRHLAGTL 251
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGG 128
K IE S +HHN EL G + QIRL+R GG
Sbjct: 252 SCKHIETSAALHHNTRELFEGAVRQIRLRRGRNGAGG 288
>MGI|MGI:2155260 [details] [associations]
symbol:Rem2 "rad and gem related GTP binding protein 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0016020 "membrane"
evidence=ISO] InterPro:IPR001806 InterPro:IPR020849 Pfam:PF00071
PRINTS:PR00449 PROSITE:PS51421 MGI:MGI:2155260 GO:GO:0005525
GO:GO:0005886 GO:GO:0007264 GO:GO:0003924 eggNOG:COG1100
InterPro:IPR025662 PANTHER:PTHR24070 HOGENOM:HOG000246961
HOVERGEN:HBG104899 InterPro:IPR017358 PIRSF:PIRSF038017 CTD:161253
KO:K07848 OrthoDB:EOG43JC57 EMBL:AK077317 EMBL:AK090165
EMBL:BC018219 IPI:IPI00124740 IPI:IPI01008327 RefSeq:NP_542764.2
UniGene:Mm.274727 PDB:3Q85 PDBsum:3Q85 ProteinModelPortal:Q8VEL9
SMR:Q8VEL9 STRING:Q8VEL9 PhosphoSite:Q8VEL9 PaxDb:Q8VEL9
PRIDE:Q8VEL9 GeneID:140743 KEGG:mmu:140743 UCSC:uc007twe.1
InParanoid:Q8VEL9 EvolutionaryTrace:Q8VEL9 NextBio:369967
CleanEx:MM_REM2 Genevestigator:Q8VEL9 GermOnline:ENSMUSG00000022176
Uniprot:Q8VEL9
Length = 341
Score = 165 (63.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 36/97 (37%), Positives = 54/97 (55%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
LI+ + + + +V + ++RL P I+V NK DLAR+R VS ++ ++LA +
Sbjct: 193 LIVFSVTDRRGFSKVPETLLRLRAGRPHHDLPVILVGNKSDLARSREVSLEEGRHLAGTL 252
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGG 128
K IE S +HHN EL G + QIRL+R GG
Sbjct: 253 SCKHIETSAALHHNTRELFEGAVRQIRLRRGRGHAGG 289
>ZFIN|ZDB-GENE-060825-251 [details] [associations]
symbol:gem "GTP binding protein overexpressed in
skeletal muscle" species:7955 "Danio rerio" [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
ZFIN:ZDB-GENE-060825-251 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0016020 GO:GO:0003924 eggNOG:COG1100
PANTHER:PTHR24070 CTD:2669 HOGENOM:HOG000246961 HOVERGEN:HBG104899
InterPro:IPR017358 PIRSF:PIRSF038017 GeneTree:ENSGT00700000104060
EMBL:BX511010 EMBL:BC122113 IPI:IPI00502930 RefSeq:NP_001039314.1
UniGene:Dr.45197 SMR:Q0P4E7 Ensembl:ENSDART00000048036
GeneID:560566 KEGG:dre:560566 InParanoid:Q0P4E7 OMA:ELHRWSI
OrthoDB:EOG40CHHZ NextBio:20883497 Uniprot:Q0P4E7
Length = 291
Score = 163 (62.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 41/111 (36%), Positives = 60/111 (54%)
Query: 17 WNEQYEKLTSSDETGLIIVWMLY-KPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLAR 75
W +Q L + D IIV+ + + S+ R ++L E + P I+V NK DL R
Sbjct: 136 WTQQ-RCLQTGD--AFIIVYAITDRSSFLRASDLRVQLRREREVDRTPIILVGNKCDLVR 192
Query: 76 ARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQT 126
R VS + ++ AA F KFIE S + HNV L GI+ Q+RL+R ++T
Sbjct: 193 CREVSISEGRSSAAVFDCKFIETSAAMQHNVWPLFEGIIRQLRLRRDSMET 243
>UNIPROTKB|E2QY62 [details] [associations]
symbol:REM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] InterPro:IPR001806 InterPro:IPR020849
Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421 GO:GO:0005525
GO:GO:0007264 GO:GO:0016020 GO:GO:0003924 InterPro:IPR025662
PROSITE:PS00675 PANTHER:PTHR24070 InterPro:IPR017358
PIRSF:PIRSF038017 GeneTree:ENSGT00700000104060 OMA:PAQKDGI
EMBL:AAEX03005604 Ensembl:ENSCAFT00000017813 Uniprot:E2QY62
Length = 347
Score = 162 (62.1 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 35/90 (38%), Positives = 53/90 (58%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
LI+ + + S+ +V + ++RL P I+V NK DLAR+R VS ++ ++LA +
Sbjct: 195 LIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVGNKSDLARSREVSLEEGRHLAGTL 254
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKR 121
K IE S +HHN EL G + QIRL+R
Sbjct: 255 SCKHIETSAALHHNTRELFEGAVRQIRLRR 284
>UNIPROTKB|F1NW22 [details] [associations]
symbol:RRAD "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0003924 PANTHER:PTHR24070 InterPro:IPR017358
PIRSF:PIRSF038017 GeneTree:ENSGT00700000104060 OMA:YSVTDKS
EMBL:AADN02031833 IPI:IPI00601668 Ensembl:ENSGALT00000008251
Uniprot:F1NW22
Length = 296
Score = 156 (60.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 39/121 (32%), Positives = 63/121 (52%)
Query: 33 IIVWMLY-KPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
+IV+ + K S+ + + I+L P I+V NK DL R+R VS + + A F
Sbjct: 154 VIVYSVTDKVSFEKASELRIQLRRARQTEDIPIILVGNKSDLVRSREVSVDEGRACAVVF 213
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQAAAPWKSNTTLVRASAVIVGS 151
KFIE S +HHNV +L GI+ QIRL++ + A+ A K ++ + + +G
Sbjct: 214 DCKFIETSAALHHNVKDLFEGIVRQIRLRKDSKEDN-ARRMANTKRRESIGKKAKRFLGR 272
Query: 152 V 152
+
Sbjct: 273 I 273
>ZFIN|ZDB-GENE-030131-5607 [details] [associations]
symbol:rrad "Ras-related associated with diabetes"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR020849
Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
ZFIN:ZDB-GENE-030131-5607 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0016020 GO:GO:0003924 PANTHER:PTHR24070
HOVERGEN:HBG104899 InterPro:IPR017358 PIRSF:PIRSF038017 CTD:6236
KO:K07845 GeneTree:ENSGT00700000104060 HSSP:P10114 OMA:YSVTDKS
EMBL:BX511110 EMBL:BC055120 IPI:IPI00491625 RefSeq:NP_956092.1
UniGene:Dr.80392 SMR:Q7SY56 Ensembl:ENSDART00000073735
GeneID:327396 KEGG:dre:327396 InParanoid:Q7SY56 NextBio:20810014
Uniprot:Q7SY56
Length = 300
Score = 156 (60.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 42/135 (31%), Positives = 67/135 (49%)
Query: 33 IIVWMLY-KPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
IIV+ + K S+ + + I+L P I+V NK DL R+R VS + A F
Sbjct: 158 IIVYSVTDKSSFEKASELRIQLRRARQSENIPIILVGNKSDLVRSREVSMDEGSACAVVF 217
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQAAAPWKSNTTLVRASAVIVGS 151
KFIE S +HHNV +L GI+ QIRL++ + A+ A K ++ + + +G
Sbjct: 218 DCKFIETSASLHHNVRDLFEGIVRQIRLRKDSKEEN-ARRMANCKRRESISKKAKRFLGR 276
Query: 152 VDGNRIWGKEFKKTS 166
+ + F++ S
Sbjct: 277 MVARKNKKMAFRQKS 291
>UNIPROTKB|F1P6W5 [details] [associations]
symbol:RRAD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0003924 PANTHER:PTHR24070 InterPro:IPR017358
PIRSF:PIRSF038017 CTD:6236 KO:K07845 OMA:EDNARRQ
GeneTree:ENSGT00700000104060 EMBL:AAEX03004131 RefSeq:XP_854048.1
Ensembl:ENSCAFT00000032478 GeneID:611304 KEGG:cfa:611304
Uniprot:F1P6W5
Length = 304
Score = 156 (60.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 35/101 (34%), Positives = 54/101 (53%)
Query: 33 IIVWMLY-KPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
+IV+ + K S+ + + ++L + P I+V NK DL R+R VS + + A F
Sbjct: 162 VIVYSVTDKGSFEKASELRVQLRRARQMDDVPIILVGNKSDLVRSREVSLDEGRACAVVF 221
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQAA 132
KFIE S +HHNV L G++ QIRL+R + + A
Sbjct: 222 DCKFIETSAALHHNVQALFEGVVRQIRLRRDSKEANARRQA 262
>RGD|1564487 [details] [associations]
symbol:Tulp4 "tubby like protein 4" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0035556 "intracellular
signal transduction" evidence=IEA] InterPro:IPR017986
InterPro:IPR001496 InterPro:IPR001680 InterPro:IPR008983
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00320 SMART:SM00969
UniPathway:UPA00143 RGD:1564487 INTERPRO:IPR000007
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0035556 GO:GO:0016567
GO:GO:0005622 SUPFAM:SSF49842 Gene3D:3.20.90.10 IPI:IPI00567008
Ensembl:ENSRNOT00000046285 ArrayExpress:F1LW93 Uniprot:F1LW93
Length = 719
Score = 113 (44.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 36/107 (33%), Positives = 48/107 (44%)
Query: 109 LLVGILNQIRLKRSLVQTGGAQAAA-PWKSNTT--LV--RASAVIVGSVDGNRIWGKEFK 163
+ V I + R LV GAQ + W + T L+ R V+VGSV G R W E
Sbjct: 148 IFVWIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEIN 207
Query: 164 KTSML--GVQWTSDSQNLLFAIKGGQVHLYDYEGNFMNKVSMWSGPG 208
S + G+ WT D Q +LF GQV + D G + V + G
Sbjct: 208 LESQITCGI-WTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDG 253
Score = 97 (39.2 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 1 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 40
+N +L+GH+ +V + WNE Y+KL + D G I VW+ Y+
Sbjct: 116 INFNLRGHNSEVVLVRWNEPYQKLATCDADGGIFVWIQYE 155
>FB|FBgn0260658 [details] [associations]
symbol:CG42541 species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0006911 "phagocytosis, engulfment" evidence=IMP]
InterPro:IPR001806 InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449
PROSITE:PS51421 GO:GO:0005525 GO:GO:0007264 GO:GO:0006911
GO:GO:0016020 EMBL:AE014298 GO:GO:0003924 PANTHER:PTHR24070
GeneTree:ENSGT00700000104060 UniGene:Dm.20557 GeneID:31344
KEGG:dme:Dmel_CG42541 FlyBase:FBgn0260658 GenomeRNAi:31344
NextBio:773153 RefSeq:NP_996345.3 ProteinModelPortal:Q7KVX6
SMR:Q7KVX6 EnsemblMetazoa:FBtr0301099 UCSC:CG32776-RB
InParanoid:Q7KVX6 OMA:CATYNID PhylomeDB:Q7KVX6 ArrayExpress:Q7KVX6
Bgee:Q7KVX6 Uniprot:Q7KVX6
Length = 1418
Score = 162 (62.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 37/88 (42%), Positives = 56/88 (63%)
Query: 33 IIVW-MLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
++V+ ++ + ++ E+ + L E L +R AI+VANK DL R R V+ Q + +A
Sbjct: 1085 VVVYSVIDRNTFAAAERVLQYLKENEMLLSRGAILVANKTDLQRHRVVTRQMGRKVAKEI 1144
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRL 119
KFIE S G+ HNVDELLVGI+ Q++L
Sbjct: 1145 ACKFIETSSGLDHNVDELLVGIVAQVKL 1172
>UNIPROTKB|F1MMK7 [details] [associations]
symbol:RRAD "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0003924 PANTHER:PTHR24070 InterPro:IPR017358
PIRSF:PIRSF038017 OMA:EDNARRQ GeneTree:ENSGT00700000104060
EMBL:DAAA02046678 IPI:IPI00710510 UniGene:Bt.12891
Ensembl:ENSBTAT00000018501 Uniprot:F1MMK7
Length = 308
Score = 153 (58.9 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 35/101 (34%), Positives = 53/101 (52%)
Query: 33 IIVWMLY-KPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
+IV+ + K S+ + + ++L P I+V NK DL R+R VS + + A F
Sbjct: 166 VIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRSREVSLDEGRACAVVF 225
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQAA 132
KFIE S +HHNV L G++ QIRL+R + + A
Sbjct: 226 DCKFIETSAALHHNVQALFEGVVRQIRLRRDSKEANARRQA 266
>UNIPROTKB|P55042 [details] [associations]
symbol:RRAD "GTP-binding protein RAD" species:9606 "Homo
sapiens" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001806
InterPro:IPR005225 InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449
PROSITE:PS51421 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0030308 GO:GO:0003924 eggNOG:COG1100
PANTHER:PTHR24070 HOGENOM:HOG000246961 HOVERGEN:HBG104899
InterPro:IPR017358 PIRSF:PIRSF038017 EMBL:L24564 EMBL:BC011645
EMBL:BC057815 IPI:IPI00375333 PIR:A49334 RefSeq:NP_001122322.1
RefSeq:NP_004156.1 UniGene:Hs.1027 PDB:2DPX PDB:2GJS PDB:3Q72
PDB:3Q7P PDB:3Q7Q PDBsum:2DPX PDBsum:2GJS PDBsum:3Q72 PDBsum:3Q7P
PDBsum:3Q7Q ProteinModelPortal:P55042 SMR:P55042 IntAct:P55042
STRING:P55042 PhosphoSite:P55042 DMDM:38258885 PaxDb:P55042
PRIDE:P55042 DNASU:6236 Ensembl:ENST00000299759
Ensembl:ENST00000420652 GeneID:6236 KEGG:hsa:6236 UCSC:uc002eqn.2
CTD:6236 GeneCards:GC16M066955 HGNC:HGNC:10446 HPA:HPA041755
MIM:179503 neXtProt:NX_P55042 PharmGKB:PA34860 InParanoid:P55042
KO:K07845 OMA:EDNARRQ OrthoDB:EOG4WSWB3 PhylomeDB:P55042
EvolutionaryTrace:P55042 GenomeRNAi:6236 NextBio:24211 Bgee:P55042
CleanEx:HS_RRAD Genevestigator:P55042 GermOnline:ENSG00000166592
Uniprot:P55042
Length = 308
Score = 153 (58.9 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 35/101 (34%), Positives = 53/101 (52%)
Query: 33 IIVWMLY-KPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
+IV+ + K S+ + + ++L P I+V NK DL R+R VS + + A F
Sbjct: 166 VIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRSREVSVDEGRACAVVF 225
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQAA 132
KFIE S +HHNV L G++ QIRL+R + + A
Sbjct: 226 DCKFIETSAALHHNVQALFEGVVRQIRLRRDSKEANARRQA 266
>MGI|MGI:1930943 [details] [associations]
symbol:Rrad "Ras-related associated with diabetes"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
InterPro:IPR001806 InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449
PROSITE:PS51421 MGI:MGI:1930943 GO:GO:0005525 GO:GO:0005886
GO:GO:0007264 GO:GO:0003924 eggNOG:COG1100 PANTHER:PTHR24070
HOGENOM:HOG000246961 HOVERGEN:HBG104899 InterPro:IPR017358
PIRSF:PIRSF038017 OrthoDB:EOG4WSWB3 EMBL:AF084466 IPI:IPI00133102
UniGene:Mm.29467 ProteinModelPortal:O88667 SMR:O88667 IntAct:O88667
MINT:MINT-101873 STRING:O88667 PhosphoSite:O88667 PaxDb:O88667
PRIDE:O88667 InParanoid:O88667 CleanEx:MM_RRAD
Genevestigator:O88667 GermOnline:ENSMUSG00000031880 Uniprot:O88667
Length = 308
Score = 153 (58.9 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 34/90 (37%), Positives = 50/90 (55%)
Query: 33 IIVWMLY-KPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
+IV+ + K S+ + + ++L P I+V NK DL R+R VS + + A F
Sbjct: 166 VIVYSITDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRSREVSVDEGRACAVVF 225
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKR 121
KFIE S +HHNV L G++ QIRL+R
Sbjct: 226 DCKFIETSAALHHNVQALFEGVVRQIRLRR 255
>MGI|MGI:99844 [details] [associations]
symbol:Gem "GTP binding protein (gene overexpressed in
skeletal muscle)" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000287 "magnesium ion
binding" evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0009898 "internal
side of plasma membrane" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=ISO]
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR020849
Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421 MGI:MGI:99844
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634 GO:GO:0007264
GO:GO:0000287 GO:GO:0003924 eggNOG:COG1100 GO:GO:0009898
GO:GO:0019003 PANTHER:PTHR24070 CTD:2669 HOGENOM:HOG000246961
HOVERGEN:HBG104899 KO:K07846 OMA:APEDHCR OrthoDB:EOG49KFR5
InterPro:IPR017358 PIRSF:PIRSF038017 EMBL:U10551 EMBL:U13053
EMBL:BC029668 IPI:IPI00323446 PIR:B54575 PIR:I49117
RefSeq:NP_034406.2 UniGene:Mm.247486 ProteinModelPortal:P55041
SMR:P55041 PhosphoSite:P55041 PRIDE:P55041
Ensembl:ENSMUST00000029868 Ensembl:ENSMUST00000108304 GeneID:14579
KEGG:mmu:14579 InParanoid:P55041 NextBio:286302 Bgee:P55041
Genevestigator:P55041 GermOnline:ENSMUSG00000028214 Uniprot:P55041
Length = 295
Score = 152 (58.6 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 34/90 (37%), Positives = 48/90 (53%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
LI+ + + S+ + + I+L P I+V NK DL R R VS + + A F
Sbjct: 153 LIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVF 212
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKR 121
KFIE S + HNV EL GI+ Q+RL+R
Sbjct: 213 DCKFIETSAAVQHNVKELFEGIVRQVRLRR 242
>RGD|1307386 [details] [associations]
symbol:Gem "GTP binding protein overexpressed in skeletal
muscle" species:10116 "Rattus norvegicus" [GO:0000287 "magnesium
ion binding" evidence=IEA;ISO] [GO:0003924 "GTPase activity"
evidence=IEA;ISO] [GO:0005525 "GTP binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0009898 "internal
side of plasma membrane" evidence=IEA;ISO] [GO:0019003 "GDP
binding" evidence=IEA;ISO] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
RGD:1307386 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634
GO:GO:0007264 GO:GO:0000287 GO:GO:0003924 GO:GO:0009898
GO:GO:0019003 PANTHER:PTHR24070 GeneTree:ENSGT00700000104060
IPI:IPI00870039 Ensembl:ENSRNOT00000020826 UCSC:RGD:1307386
Uniprot:E9PT99
Length = 295
Score = 152 (58.6 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 34/90 (37%), Positives = 48/90 (53%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
LI+ + + S+ + + I+L P I+V NK DL R R VS + + A F
Sbjct: 153 LIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVF 212
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKR 121
KFIE S + HNV EL GI+ Q+RL+R
Sbjct: 213 DCKFIETSAAVQHNVKELFEGIVRQVRLRR 242
>UNIPROTKB|A4IFA1 [details] [associations]
symbol:GEM "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019003 "GDP binding" evidence=IEA] [GO:0009898
"internal side of plasma membrane" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0000287 "magnesium
ion binding" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR005225 InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449
PROSITE:PS51421 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634
GO:GO:0007264 GO:GO:0000287 GO:GO:0003924 eggNOG:COG1100
GO:GO:0009898 GO:GO:0019003 PANTHER:PTHR24070 CTD:2669
HOGENOM:HOG000246961 HOVERGEN:HBG104899 KO:K07846 OMA:APEDHCR
OrthoDB:EOG49KFR5 InterPro:IPR017358 PIRSF:PIRSF038017
GeneTree:ENSGT00700000104060 EMBL:DAAA02039467 EMBL:BC134475
IPI:IPI00705047 RefSeq:NP_001077201.1 UniGene:Bt.37823 SMR:A4IFA1
Ensembl:ENSBTAT00000009992 GeneID:538437 KEGG:bta:538437
InParanoid:A4IFA1 NextBio:20877360 Uniprot:A4IFA1
Length = 296
Score = 152 (58.6 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 34/90 (37%), Positives = 48/90 (53%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
LI+ + + S+ + + I+L P I+V NK DL R R VS + + A F
Sbjct: 154 LIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVF 213
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKR 121
KFIE S + HNV EL GI+ Q+RL+R
Sbjct: 214 DCKFIETSAAVQHNVKELFEGIVRQVRLRR 243
>UNIPROTKB|J9P6J7 [details] [associations]
symbol:GEM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0003924 PANTHER:PTHR24070 CTD:2669 KO:K07846 OMA:APEDHCR
InterPro:IPR017358 PIRSF:PIRSF038017 GeneTree:ENSGT00700000104060
EMBL:AAEX03015955 EMBL:AAEX03015956 RefSeq:XP_854414.2
ProteinModelPortal:J9P6J7 Ensembl:ENSCAFT00000048850 GeneID:611634
KEGG:cfa:611634 Uniprot:J9P6J7
Length = 296
Score = 152 (58.6 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 34/90 (37%), Positives = 48/90 (53%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
LI+ + + S+ + + I+L P I+V NK DL R R VS + + A F
Sbjct: 154 LIVYSITDRASFEKASELRIQLRRARQAEDIPIILVGNKSDLVRCREVSVSEGRACAVVF 213
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKR 121
KFIE S + HNV EL GI+ Q+RL+R
Sbjct: 214 DCKFIETSAAVQHNVKELFEGIVRQVRLRR 243
>UNIPROTKB|P55040 [details] [associations]
symbol:GEM "GTP-binding protein GEM" species:9606 "Homo
sapiens" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006955 "immune response"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007166 "cell surface receptor signaling pathway" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019003 "GDP
binding" evidence=IDA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0000287 "magnesium ion binding" evidence=IDA] [GO:0005525 "GTP
binding" evidence=IDA] [GO:0009898 "internal side of plasma
membrane" evidence=IDA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634 GO:GO:0007264
EMBL:CH471060 GO:GO:0006955 GO:GO:0000287 GO:GO:0003924
GO:GO:0007166 eggNOG:COG1100 GO:GO:0009898 GO:GO:0019003
PANTHER:PTHR24070 EMBL:U10550 EMBL:U13052 EMBL:AK314017
EMBL:BC022010 IPI:IPI00022710 PIR:A54575 PIR:I38745
RefSeq:NP_005252.1 RefSeq:NP_859053.1 UniGene:Hs.654463 PDB:2CJW
PDB:2G3Y PDB:2HT6 PDBsum:2CJW PDBsum:2G3Y PDBsum:2HT6
ProteinModelPortal:P55040 SMR:P55040 DIP:DIP-41587N IntAct:P55040
MINT:MINT-1468979 STRING:P55040 PhosphoSite:P55040 DMDM:1707896
PaxDb:P55040 PRIDE:P55040 DNASU:2669 Ensembl:ENST00000297596
Ensembl:ENST00000396194 GeneID:2669 KEGG:hsa:2669 UCSC:uc003ygi.3
CTD:2669 GeneCards:GC08M095330 HGNC:HGNC:4234 HPA:HPA024798
MIM:600164 neXtProt:NX_P55040 PharmGKB:PA28645 HOGENOM:HOG000246961
HOVERGEN:HBG104899 InParanoid:P55040 KO:K07846 OMA:APEDHCR
OrthoDB:EOG49KFR5 PhylomeDB:P55040 EvolutionaryTrace:P55040
GenomeRNAi:2669 NextBio:10532 ArrayExpress:P55040 Bgee:P55040
CleanEx:HS_GEM Genevestigator:P55040 GermOnline:ENSG00000164949
InterPro:IPR017358 PIRSF:PIRSF038017 Uniprot:P55040
Length = 296
Score = 152 (58.6 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 34/90 (37%), Positives = 48/90 (53%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
LI+ + + S+ + + I+L P I+V NK DL R R VS + + A F
Sbjct: 154 LIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVF 213
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKR 121
KFIE S + HNV EL GI+ Q+RL+R
Sbjct: 214 DCKFIETSAAVQHNVKELFEGIVRQVRLRR 243
>UNIPROTKB|F1RY45 [details] [associations]
symbol:GEM "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019003 "GDP binding" evidence=IEA] [GO:0009898
"internal side of plasma membrane" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0000287 "magnesium
ion binding" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR005225 InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449
PROSITE:PS51421 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634
GO:GO:0007264 GO:GO:0000287 GO:GO:0003924 GO:GO:0009898
GO:GO:0019003 PANTHER:PTHR24070 CTD:2669 KO:K07846 OMA:APEDHCR
InterPro:IPR017358 PIRSF:PIRSF038017 GeneTree:ENSGT00700000104060
EMBL:CU407285 RefSeq:XP_001927011.3 UniGene:Ssc.639
Ensembl:ENSSSCT00000006697 Ensembl:ENSSSCT00000033083 GeneID:404772
KEGG:ssc:404772 Uniprot:F1RY45
Length = 296
Score = 152 (58.6 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 34/90 (37%), Positives = 48/90 (53%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
LI+ + + S+ + + I+L P I+V NK DL R R VS + + A F
Sbjct: 154 LIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVF 213
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKR 121
KFIE S + HNV EL GI+ Q+RL+R
Sbjct: 214 DCKFIETSAAVQHNVKELFEGIVRQVRLRR 243
>ZFIN|ZDB-GENE-040317-1 [details] [associations]
symbol:rem1 "rad and gem related GTP binding protein
1" species:7955 "Danio rerio" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR020849
Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421 ZFIN:ZDB-GENE-040317-1
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0003924 eggNOG:COG1100 PANTHER:PTHR24070 HOGENOM:HOG000246961
HOVERGEN:HBG104899 InterPro:IPR017358 PIRSF:PIRSF038017 CTD:28954
KO:K07847 OrthoDB:EOG4G7C0D GeneTree:ENSGT00700000104060
HSSP:P10114 EMBL:AL831791 EMBL:BC045943 IPI:IPI00504564
RefSeq:NP_957468.1 UniGene:Dr.132758 SMR:Q7ZVA2
Ensembl:ENSDART00000017599 GeneID:394149 KEGG:dre:394149
InParanoid:Q7ZVA2 OMA:SVYKRKE NextBio:20815100 Uniprot:Q7ZVA2
Length = 298
Score = 152 (58.6 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 35/90 (38%), Positives = 50/90 (55%)
Query: 33 IIVWMLY-KPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
IIV+ + + S+ + I+L P I+V NK DL R+R V+ ++ + A F
Sbjct: 156 IIVYSITDRSSFESASELRIQLRRIRQAENIPIILVGNKSDLVRSREVAVEEGRACAVMF 215
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKR 121
KFIE S +HHNV EL G + QIRL+R
Sbjct: 216 DCKFIETSASLHHNVHELFEGTVRQIRLRR 245
>RGD|69357 [details] [associations]
symbol:Rrad "Ras-related associated with diabetes" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IMP] InterPro:IPR001806 InterPro:IPR020849 Pfam:PF00071
PRINTS:PR00449 PROSITE:PS51421 RGD:69357 GO:GO:0005525 GO:GO:0005886
GO:GO:0007264 GO:GO:0030308 GO:GO:0003924 eggNOG:COG1100
PANTHER:PTHR24070 HOGENOM:HOG000246961 HOVERGEN:HBG104899
InterPro:IPR017358 PIRSF:PIRSF038017 OrthoDB:EOG4WSWB3 EMBL:U12187
IPI:IPI00213511 UniGene:Rn.11189 ProteinModelPortal:P55043
SMR:P55043 STRING:P55043 UCSC:RGD:69357 InParanoid:P55043
NextBio:615995 Genevestigator:P55043 GermOnline:ENSRNOG00000011901
Uniprot:P55043
Length = 306
Score = 151 (58.2 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 38/121 (31%), Positives = 63/121 (52%)
Query: 33 IIVWMLY-KPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
+IV+ + K S+ + + ++L P I+V NK DL R+R VS + + A F
Sbjct: 165 VIVYSITDKGSFEKASELRVQLRARRQTDV-PIILVGNKSDLVRSREVSVDEGRACAEVF 223
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQAAAPWKSNTTLVRASAVIVGS 151
KFIE S +HHNV L G++ QIRL+R + A+ A + +L + + + +G
Sbjct: 224 DCKFIETSAALHHNVQALFEGVVRQIRLRRDSKEDN-ARRQAGTRRRESLGKKAKLFLGR 282
Query: 152 V 152
+
Sbjct: 283 I 283
>UNIPROTKB|P55043 [details] [associations]
symbol:Rrad "GTP-binding protein RAD" species:10116 "Rattus
norvegicus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
RGD:69357 GO:GO:0005525 GO:GO:0005886 GO:GO:0007264 GO:GO:0030308
GO:GO:0003924 eggNOG:COG1100 PANTHER:PTHR24070 HOGENOM:HOG000246961
HOVERGEN:HBG104899 InterPro:IPR017358 PIRSF:PIRSF038017
OrthoDB:EOG4WSWB3 EMBL:U12187 IPI:IPI00213511 UniGene:Rn.11189
ProteinModelPortal:P55043 SMR:P55043 STRING:P55043 UCSC:RGD:69357
InParanoid:P55043 NextBio:615995 Genevestigator:P55043
GermOnline:ENSRNOG00000011901 Uniprot:P55043
Length = 306
Score = 151 (58.2 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 38/121 (31%), Positives = 63/121 (52%)
Query: 33 IIVWMLY-KPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
+IV+ + K S+ + + ++L P I+V NK DL R+R VS + + A F
Sbjct: 165 VIVYSITDKGSFEKASELRVQLRARRQTDV-PIILVGNKSDLVRSREVSVDEGRACAEVF 223
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQAAAPWKSNTTLVRASAVIVGS 151
KFIE S +HHNV L G++ QIRL+R + A+ A + +L + + + +G
Sbjct: 224 DCKFIETSAALHHNVQALFEGVVRQIRLRRDSKEDN-ARRQAGTRRRESLGKKAKLFLGR 282
Query: 152 V 152
+
Sbjct: 283 I 283
>UNIPROTKB|E1BH25 [details] [associations]
symbol:TULP4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0035556 "intracellular
signal transduction" evidence=IEA] InterPro:IPR017986
InterPro:IPR001496 InterPro:IPR001680 InterPro:IPR008983
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00320 SMART:SM00969
UniPathway:UPA00143 INTERPRO:IPR000007 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0035556 GO:GO:0016567
SUPFAM:SSF49842 InterPro:IPR025659 SUPFAM:SSF54518
Gene3D:3.20.90.10 Pfam:PF01167 GeneTree:ENSGT00610000085970
OMA:PCTSATL EMBL:DAAA02027335 EMBL:DAAA02027336 EMBL:DAAA02027337
IPI:IPI00841171 Ensembl:ENSBTAT00000045051 Uniprot:E1BH25
Length = 1463
Score = 113 (44.8 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 36/107 (33%), Positives = 48/107 (44%)
Query: 109 LLVGILNQIRLKRSLVQTGGAQAAA-PWKSNTT--LV--RASAVIVGSVDGNRIWGKEFK 163
+ V I + R LV GAQ + W + T L+ R V+VGSV G R W E
Sbjct: 106 IFVWIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEIN 165
Query: 164 KTSML--GVQWTSDSQNLLFAIKGGQVHLYDYEGNFMNKVSMWSGPG 208
S + G+ WT D Q +LF GQV + D G + V + G
Sbjct: 166 LESQITCGI-WTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDG 211
Score = 97 (39.2 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 1 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 40
+N +L+GH+ +V + WNE Y+KL + D G I VW+ Y+
Sbjct: 74 INFNLRGHNSEVVLVRWNEPYQKLATCDADGGIFVWIQYE 113
>UNIPROTKB|F1P9V3 [details] [associations]
symbol:TULP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR008983 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082 PROSITE:PS50225
PROSITE:PS50294 SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
INTERPRO:IPR000007 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0035556
GO:GO:0016567 GO:GO:0005622 SUPFAM:SSF49842 InterPro:IPR025659
SUPFAM:SSF54518 Gene3D:3.20.90.10 Pfam:PF01167
GeneTree:ENSGT00610000085970 EMBL:AAEX03000309
Ensembl:ENSCAFT00000001007 Uniprot:F1P9V3
Length = 1537
Score = 113 (44.8 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 36/107 (33%), Positives = 48/107 (44%)
Query: 109 LLVGILNQIRLKRSLVQTGGAQAAA-PWKSNTT--LV--RASAVIVGSVDGNRIWGKEFK 163
+ V I + R LV GAQ + W + T L+ R V+VGSV G R W E
Sbjct: 106 IFVWIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEIN 165
Query: 164 KTSML--GVQWTSDSQNLLFAIKGGQVHLYDYEGNFMNKVSMWSGPG 208
S + G+ WT D Q +LF GQV + D G + V + G
Sbjct: 166 LESQITCGI-WTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDG 211
Score = 97 (39.2 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 1 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 40
+N +L+GH+ +V + WNE Y+KL + D G I VW+ Y+
Sbjct: 74 INFNLRGHNSEVVLVRWNEPYQKLATCDADGGIFVWIQYE 113
>UNIPROTKB|F1P5M4 [details] [associations]
symbol:GEM "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009898 "internal side of plasma membrane" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR005225 InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449
PROSITE:PS51421 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634
GO:GO:0007264 GO:GO:0000287 GO:GO:0003924 GO:GO:0009898
GO:GO:0019003 PANTHER:PTHR24070 OMA:APEDHCR InterPro:IPR017358
PIRSF:PIRSF038017 GeneTree:ENSGT00700000104060 EMBL:AADN02024875
IPI:IPI00595265 Ensembl:ENSGALT00000025711 ArrayExpress:F1P5M4
Uniprot:F1P5M4
Length = 297
Score = 150 (57.9 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 34/90 (37%), Positives = 48/90 (53%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
LI+ + + S+ + + I+L P I+V NK DL R R VS + + A F
Sbjct: 155 LIVYSITDRASFEKASELRIQLRRARQKEDIPIILVGNKSDLVRCREVSVAEGRACAVVF 214
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKR 121
KFIE S + HNV EL GI+ Q+RL+R
Sbjct: 215 DCKFIETSAAVQHNVKELFEGIVRQVRLRR 244
>UNIPROTKB|Q9NRJ4 [details] [associations]
symbol:TULP4 "Tubby-related protein 4" species:9606 "Homo
sapiens" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0007584 "response
to nutrient" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR008983 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 INTERPRO:IPR000007 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0035556
EMBL:CH471051 GO:GO:0007584 GO:GO:0003700 GO:GO:0016567
SUPFAM:SSF49842 InterPro:IPR025659 SUPFAM:SSF54518
Gene3D:3.20.90.10 Pfam:PF01167 EMBL:AF219946 EMBL:AF288480
EMBL:AB037818 EMBL:AL360169 EMBL:AL353800 EMBL:BC152476
IPI:IPI00024994 IPI:IPI00216584 RefSeq:NP_001007467.1
RefSeq:NP_064630.2 UniGene:Hs.486993 ProteinModelPortal:Q9NRJ4
SMR:Q9NRJ4 IntAct:Q9NRJ4 MINT:MINT-3973117 STRING:Q9NRJ4
PhosphoSite:Q9NRJ4 DMDM:212276475 PaxDb:Q9NRJ4 PRIDE:Q9NRJ4
DNASU:56995 Ensembl:ENST00000367094 Ensembl:ENST00000367097
GeneID:56995 KEGG:hsa:56995 UCSC:uc003qrf.3 UCSC:uc003qrg.3
CTD:56995 GeneCards:GC06P158733 H-InvDB:HIX0006328 HGNC:HGNC:15530
HPA:HPA005445 neXtProt:NX_Q9NRJ4 PharmGKB:PA134880863
eggNOG:NOG255100 HOGENOM:HOG000060128 HOVERGEN:HBG058280
InParanoid:Q9NRJ4 OMA:PCTSATL OrthoDB:EOG4C2H8N ChiTaRS:TULP4
GenomeRNAi:56995 NextBio:62701 Bgee:Q9NRJ4 CleanEx:HS_TULP4
Genevestigator:Q9NRJ4 GermOnline:ENSG00000130338 Uniprot:Q9NRJ4
Length = 1543
Score = 113 (44.8 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 36/107 (33%), Positives = 48/107 (44%)
Query: 109 LLVGILNQIRLKRSLVQTGGAQAAA-PWKSNTT--LV--RASAVIVGSVDGNRIWGKEFK 163
+ V I + R LV GAQ + W + T L+ R V+VGSV G R W E
Sbjct: 106 IFVWIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEIN 165
Query: 164 KTSML--GVQWTSDSQNLLFAIKGGQVHLYDYEGNFMNKVSMWSGPG 208
S + G+ WT D Q +LF GQV + D G + V + G
Sbjct: 166 LESQITCGI-WTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDG 211
Score = 97 (39.2 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 1 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 40
+N +L+GH+ +V + WNE Y+KL + D G I VW+ Y+
Sbjct: 74 INFNLRGHNSEVVLVRWNEPYQKLATCDADGGIFVWIQYE 113
>MGI|MGI:1916092 [details] [associations]
symbol:Tulp4 "tubby like protein 4" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISA] [GO:0008150 "biological_process"
evidence=ND] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR008983 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082 PROSITE:PS50225
PROSITE:PS50294 SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
MGI:MGI:1916092 INTERPRO:IPR000007 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0035556 GO:GO:0016567
SUPFAM:SSF49842 InterPro:IPR025659 SUPFAM:SSF54518
Gene3D:3.20.90.10 Pfam:PF01167 GeneTree:ENSGT00610000085970
CTD:56995 eggNOG:NOG255100 HOGENOM:HOG000060128 OMA:PCTSATL
OrthoDB:EOG4C2H8N ChiTaRS:TULP4 EMBL:AF219945 EMBL:AK039439
EMBL:BC008557 EMBL:BC138024 EMBL:BC138025 IPI:IPI00120734
RefSeq:NP_473381.1 UniGene:Mm.449307 UniGene:Mm.482119
UniGene:Mm.486644 ProteinModelPortal:Q9JIL5 SMR:Q9JIL5
STRING:Q9JIL5 PhosphoSite:Q9JIL5 PaxDb:Q9JIL5 PRIDE:Q9JIL5
Ensembl:ENSMUST00000039655 GeneID:68842 KEGG:mmu:68842
UCSC:uc008agh.2 HOVERGEN:HBG057880 InParanoid:B2RQP8 NextBio:328035
Bgee:Q9JIL5 CleanEx:MM_TULP4 Genevestigator:Q9JIL5
GermOnline:ENSMUSG00000034377 Uniprot:Q9JIL5
Length = 1547
Score = 113 (44.8 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 36/107 (33%), Positives = 48/107 (44%)
Query: 109 LLVGILNQIRLKRSLVQTGGAQAAA-PWKSNTT--LV--RASAVIVGSVDGNRIWGKEFK 163
+ V I + R LV GAQ + W + T L+ R V+VGSV G R W E
Sbjct: 106 IFVWIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEIN 165
Query: 164 KTSML--GVQWTSDSQNLLFAIKGGQVHLYDYEGNFMNKVSMWSGPG 208
S + G+ WT D Q +LF GQV + D G + V + G
Sbjct: 166 LESQITCGI-WTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDG 211
Score = 97 (39.2 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 1 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 40
+N +L+GH+ +V + WNE Y+KL + D G I VW+ Y+
Sbjct: 74 INFNLRGHNSEVVLVRWNEPYQKLATCDADGGIFVWIQYE 113
>UNIPROTKB|J9P1J3 [details] [associations]
symbol:TULP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR008983 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082 PROSITE:PS50225
PROSITE:PS50294 SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
INTERPRO:IPR000007 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0035556
GO:GO:0016567 GO:GO:0005622 SUPFAM:SSF49842 InterPro:IPR025659
SUPFAM:SSF54518 Gene3D:3.20.90.10 Pfam:PF01167
GeneTree:ENSGT00610000085970 CTD:56995 OMA:PCTSATL
EMBL:AAEX03000309 RefSeq:XP_541170.4 Ensembl:ENSCAFT00000049968
GeneID:484053 KEGG:cfa:484053 Uniprot:J9P1J3
Length = 1548
Score = 113 (44.8 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 36/107 (33%), Positives = 48/107 (44%)
Query: 109 LLVGILNQIRLKRSLVQTGGAQAAA-PWKSNTT--LV--RASAVIVGSVDGNRIWGKEFK 163
+ V I + R LV GAQ + W + T L+ R V+VGSV G R W E
Sbjct: 106 IFVWIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEIN 165
Query: 164 KTSML--GVQWTSDSQNLLFAIKGGQVHLYDYEGNFMNKVSMWSGPG 208
S + G+ WT D Q +LF GQV + D G + V + G
Sbjct: 166 LESQITCGI-WTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDG 211
Score = 97 (39.2 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 1 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 40
+N +L+GH+ +V + WNE Y+KL + D G I VW+ Y+
Sbjct: 74 INFNLRGHNSEVVLVRWNEPYQKLATCDADGGIFVWIQYE 113
>MGI|MGI:1097696 [details] [associations]
symbol:Rem1 "rad and gem related GTP binding protein 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
EMBL:U91601 MGI:MGI:1097696 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0016020 GO:GO:0003924 eggNOG:COG1100
PANTHER:PTHR24070 HOGENOM:HOG000246961 HOVERGEN:HBG104899
InterPro:IPR017358 PIRSF:PIRSF038017 CTD:28954 KO:K07847
OMA:KLDESWS OrthoDB:EOG4G7C0D EMBL:AK053133 EMBL:AK084460
IPI:IPI00136140 RefSeq:NP_033073.1 UniGene:Mm.8752
ProteinModelPortal:O35929 SMR:O35929 MINT:MINT-101892 STRING:O35929
PhosphoSite:O35929 PRIDE:O35929 Ensembl:ENSMUST00000000369
GeneID:19700 KEGG:mmu:19700 GeneTree:ENSGT00700000104060
InParanoid:O35929 ChiTaRS:REM1 NextBio:297060 Bgee:O35929
CleanEx:MM_REM1 Genevestigator:O35929 GermOnline:ENSMUSG00000000359
Uniprot:O35929
Length = 297
Score = 149 (57.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 34/90 (37%), Positives = 50/90 (55%)
Query: 33 IIVWMLY-KPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
+IV+ + + S+ + I+L P I+V NK DLAR R VS ++ + A F
Sbjct: 157 VIVYSIADRSSFESASELRIQLRRTHQANHVPIILVGNKADLARCREVSVEEGRACAVVF 216
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKR 121
KFIE S + HNV EL G++ Q+RL+R
Sbjct: 217 DCKFIETSATLQHNVTELFEGVVRQLRLRR 246
>RGD|1306560 [details] [associations]
symbol:Rem1 "RAS (RAD and GEM)-like GTP-binding 1" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
RGD:1306560 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0016020 GO:GO:0003924 EMBL:CH474050 eggNOG:COG1100
PANTHER:PTHR24070 HOGENOM:HOG000246961 HOVERGEN:HBG104899
InterPro:IPR017358 PIRSF:PIRSF038017 CTD:28954 KO:K07847
OMA:KLDESWS OrthoDB:EOG4G7C0D GeneTree:ENSGT00700000104060
EMBL:BC098946 IPI:IPI00368816 RefSeq:NP_001020924.1
UniGene:Rn.88325 SMR:Q4KLY1 Ensembl:ENSRNOT00000010149
GeneID:366232 KEGG:rno:366232 UCSC:RGD:1306560 InParanoid:Q4KLY1
NextBio:689021 Genevestigator:Q4KLY1 Uniprot:Q4KLY1
Length = 297
Score = 149 (57.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 35/105 (33%), Positives = 54/105 (51%)
Query: 17 WNEQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARA 76
W++ E + +I+ + + S+ + I+L P I+V NK DLAR
Sbjct: 144 WSQ--ESCLQAGSAYVIVYSIADRSSFESASELRIQLRRTHQAAHVPIILVGNKADLARC 201
Query: 77 RAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKR 121
R VS ++ + A F KFIE S + HNV EL G++ Q+RL+R
Sbjct: 202 REVSVEEGRACAVVFDCKFIETSATLQHNVTELFEGVVRQLRLRR 246
>UNIPROTKB|J9NWX9 [details] [associations]
symbol:REM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0003924 PANTHER:PTHR24070 InterPro:IPR017358
PIRSF:PIRSF038017 CTD:28954 KO:K07847 OMA:KLDESWS
GeneTree:ENSGT00700000104060 EMBL:AAEX03013871 RefSeq:XP_542947.1
Ensembl:ENSCAFT00000046761 GeneID:485823 KEGG:cfa:485823
Uniprot:J9NWX9
Length = 298
Score = 148 (57.2 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 31/70 (44%), Positives = 43/70 (61%)
Query: 52 RLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLV 111
R H+ ++ P I+V NK DLAR R VS ++ + A F KFIE S + HNV EL
Sbjct: 181 RTHQADHV---PIILVGNKADLARCREVSVEEGRACAVVFDCKFIETSAALQHNVAELFE 237
Query: 112 GILNQIRLKR 121
G++ Q+RL+R
Sbjct: 238 GVVRQLRLRR 247
>UNIPROTKB|F1PQQ4 [details] [associations]
symbol:REM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0003924 PANTHER:PTHR24070 InterPro:IPR017358
PIRSF:PIRSF038017 GeneTree:ENSGT00700000104060 EMBL:AAEX03013871
Ensembl:ENSCAFT00000011203 Uniprot:F1PQQ4
Length = 312
Score = 148 (57.2 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 31/70 (44%), Positives = 43/70 (61%)
Query: 52 RLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLV 111
R H+ ++ P I+V NK DLAR R VS ++ + A F KFIE S + HNV EL
Sbjct: 195 RTHQADHV---PIILVGNKADLARCREVSVEEGRACAVVFDCKFIETSAALQHNVAELFE 251
Query: 112 GILNQIRLKR 121
G++ Q+RL+R
Sbjct: 252 GVVRQLRLRR 261
>UNIPROTKB|I3L820 [details] [associations]
symbol:RRAD "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR001806 InterPro:IPR020849 Pfam:PF00071
PRINTS:PR00449 PROSITE:PS51421 GO:GO:0005525 GO:GO:0007264
GO:GO:0016020 GO:GO:0003924 PANTHER:PTHR24070
GeneTree:ENSGT00700000104060 Ensembl:ENSSSCT00000026454 OMA:YSVTDKS
Uniprot:I3L820
Length = 237
Score = 144 (55.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 37/115 (32%), Positives = 58/115 (50%)
Query: 33 IIVWMLY-KPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
+IV+ + K S+ + + ++L P I+V NK DL R+R VS + + F
Sbjct: 114 VIVYSVTDKDSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRSREVSLDGVEVIV--F 171
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQAAAPWKSNTTLVRASA 146
KFIE S +HHNV L G++ QIRL+R + + A + + +ASA
Sbjct: 172 LAKFIETSAALHHNVQALFEGVVRQIRLRRDSKEANARRQAGTRRRESLGKKASA 226
>UNIPROTKB|O75628 [details] [associations]
symbol:REM1 "GTP-binding protein REM 1" species:9606 "Homo
sapiens" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR020849
Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CH471077 GO:GO:0007264 GO:GO:0016020
GO:GO:0003924 eggNOG:COG1100 PANTHER:PTHR24070 EMBL:AL121751
HOGENOM:HOG000246961 HOVERGEN:HBG104899 InterPro:IPR017358
PIRSF:PIRSF038017 EMBL:AF084465 EMBL:AF152863 EMBL:BT020078
EMBL:BT020079 EMBL:AK313060 EMBL:BC039813 IPI:IPI00289912
RefSeq:NP_054731.2 UniGene:Hs.247729 PDB:2NZJ PDBsum:2NZJ
ProteinModelPortal:O75628 SMR:O75628 STRING:O75628
PhosphoSite:O75628 PaxDb:O75628 PRIDE:O75628 DNASU:28954
Ensembl:ENST00000201979 GeneID:28954 KEGG:hsa:28954 UCSC:uc002wwa.3
CTD:28954 GeneCards:GC20P030063 HGNC:HGNC:15922 HPA:HPA049821
MIM:610388 neXtProt:NX_O75628 PharmGKB:PA34324 InParanoid:O75628
KO:K07847 OMA:KLDESWS OrthoDB:EOG4G7C0D PhylomeDB:O75628
EvolutionaryTrace:O75628 GenomeRNAi:28954 NextBio:51769 Bgee:O75628
CleanEx:HS_REM1 Genevestigator:O75628 GermOnline:ENSG00000088320
Uniprot:O75628
Length = 298
Score = 147 (56.8 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 35/93 (37%), Positives = 51/93 (54%)
Query: 52 RLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLV 111
R H+ ++ P I+V NK DLAR R VS ++ + A F KFIE S + HNV EL
Sbjct: 181 RTHQADHV---PIILVGNKADLARCREVSVEEGRACAVVFDCKFIETSATLQHNVAELFE 237
Query: 112 GILNQIRLKRSLVQTGGAQAAAPWKSNTTLVRA 144
G++ Q+RL+R + + AP + + RA
Sbjct: 238 GVVRQLRLRRR--DSAAKEPPAPRRPASLAQRA 268
>UNIPROTKB|Q29RP3 [details] [associations]
symbol:REM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0003924 eggNOG:COG1100 PANTHER:PTHR24070 HOGENOM:HOG000246961
HOVERGEN:HBG104899 InterPro:IPR017358 PIRSF:PIRSF038017 CTD:28954
KO:K07847 OMA:KLDESWS OrthoDB:EOG4G7C0D
GeneTree:ENSGT00700000104060 EMBL:DAAA02036384 EMBL:BC114085
IPI:IPI00685212 RefSeq:NP_001039466.1 UniGene:Bt.28596 SMR:Q29RP3
Ensembl:ENSBTAT00000018843 GeneID:508364 KEGG:bta:508364
InParanoid:Q29RP3 NextBio:20868484 Uniprot:Q29RP3
Length = 298
Score = 146 (56.5 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 31/70 (44%), Positives = 43/70 (61%)
Query: 52 RLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLV 111
R H+ ++ P I+V NK DLAR R VS ++ + A F KFIE S + HNV EL
Sbjct: 181 RTHQADHV---PIILVGNKADLARCREVSVEEGRACAVVFDCKFIETSATLQHNVAELFE 237
Query: 112 GILNQIRLKR 121
G++ Q+RL+R
Sbjct: 238 GVVRQLRLRR 247
>ZFIN|ZDB-GENE-060503-215 [details] [associations]
symbol:tulp4 "tubby like protein 4" species:7955
"Danio rerio" [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR008983 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294
SMART:SM00320 INTERPRO:IPR000007 ZFIN:ZDB-GENE-060503-215
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0035556 GO:GO:0005622
SUPFAM:SSF49842 InterPro:IPR025659 SUPFAM:SSF54518 EMBL:BX890562
Gene3D:3.20.90.10 Pfam:PF01167 GeneTree:ENSGT00610000085970
IPI:IPI00499393 Ensembl:ENSDART00000132625 Uniprot:F6NJC6
Length = 1736
Score = 112 (44.5 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 35/107 (32%), Positives = 48/107 (44%)
Query: 109 LLVGILNQIRLKRSLVQTGGAQAAA-PWKSNTT--LV--RASAVIVGSVDGNRIWGKEFK 163
+ V I + R LV GAQ + W + T L+ R V+VGSV G R W E
Sbjct: 106 IFVWIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEIN 165
Query: 164 KTSML--GVQWTSDSQNLLFAIKGGQVHLYDYEGNFMNKVSMWSGPG 208
S + G+ WT D Q +LF GQV + D G + + + G
Sbjct: 166 LESQITCGI-WTPDDQQVLFGTADGQVIVMDCHGRMLAHILLHEAEG 211
Score = 93 (37.8 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 1 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 40
+N +L+GH+ +V + WNE ++KL + D G I VW+ Y+
Sbjct: 74 INFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYE 113
>UNIPROTKB|F1SES8 [details] [associations]
symbol:F1SES8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR001806 InterPro:IPR020849 Pfam:PF00071
PRINTS:PR00449 PROSITE:PS51421 GO:GO:0005525 GO:GO:0007264
GO:GO:0016020 GO:GO:0003924 PANTHER:PTHR24070 InterPro:IPR017358
PIRSF:PIRSF038017 GeneTree:ENSGT00700000104060 EMBL:CU407217
Ensembl:ENSSSCT00000007657 OMA:DRTESAT Uniprot:F1SES8
Length = 303
Score = 145 (56.1 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 52 RLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLV 111
R H+ ++ P I+V NK DLAR R VS + + A F KFIE S + HNV EL
Sbjct: 186 RTHQADHV---PIILVGNKADLARCREVSVEXGRACAVVFDCKFIETSATLQHNVTELFE 242
Query: 112 GILNQIRLKRSLVQTGG 128
G++ Q+RL+R ++ G
Sbjct: 243 GVVRQLRLRRRDLRAQG 259
>FB|FBgn0039530 [details] [associations]
symbol:Tusp "Tusp" species:7227 "Drosophila melanogaster"
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00320 SMART:SM00969
INTERPRO:IPR000007 EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0035556 GO:GO:0005622 InterPro:IPR025659 SUPFAM:SSF54518
Gene3D:3.20.90.10 Pfam:PF01167 RefSeq:NP_001189303.1
RefSeq:NP_651573.4 ProteinModelPortal:Q9VB18 SMR:Q9VB18
GeneID:43317 KEGG:dme:Dmel_CG5586 CTD:43317 FlyBase:FBgn0039530
InParanoid:Q9VB18 OrthoDB:EOG47H44T GenomeRNAi:43317 NextBio:833311
Bgee:Q9VB18 Uniprot:Q9VB18
Length = 1401
Score = 106 (42.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 2 NQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 40
N +L+GH V + WNE Y+KL S D +G+I VW+ Y+
Sbjct: 47 NYNLRGHRSDVILVKWNEPYQKLASCDSSGIIFVWIKYE 85
Score = 92 (37.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 147 VIVGSVDGNRIWGK--EFKKTSMLGVQWTSDSQNLLFAIKGGQVHLYDYEGNFMNKVSM 203
V+VGSV G R W + T G+ WT D Q + F GQV + D G +++V +
Sbjct: 121 VLVGSVAGQRYWSSMLNLESTITCGI-WTPDDQQVYFGTTQGQVIVMDVHGAMVSQVQL 178
>ZFIN|ZDB-GENE-081110-1 [details] [associations]
symbol:rem2 "RAS (RAD and GEM)-like GTP binding 2"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IMP] InterPro:IPR001806 InterPro:IPR020849 Pfam:PF00071
PRINTS:PR00449 PROSITE:PS51421 ZFIN:ZDB-GENE-081110-1 GO:GO:0005525
GO:GO:0007264 GO:GO:0016020 GO:GO:0071542 GO:GO:0003924
PANTHER:PTHR24070 HOGENOM:HOG000246961 HOVERGEN:HBG104899
GeneTree:ENSGT00700000104060 CTD:161253 eggNOG:NOG262433
EMBL:AL953896 IPI:IPI00868297 RefSeq:NP_001116518.1
UniGene:Dr.76420 Ensembl:ENSDART00000109219 GeneID:798285
KEGG:dre:798285 OMA:SIDSETQ OrthoDB:EOG4H19WQ NextBio:20933347
Uniprot:B0R168
Length = 306
Score = 137 (53.3 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 45/146 (30%), Positives = 76/146 (52%)
Query: 18 NEQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARAR 77
N + E T E +++ + + S+HR+ Q + L E L P I+V NK DL R+R
Sbjct: 133 NWKQELSTLQCEVCILVFSLTDRRSFHRIAQLRLLLRES--LPHTPIILVGNKSDLVRSR 190
Query: 78 AVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQ--TGGAQAAAPW 135
+S+++A + A F ++E+SV + H ++LL + R SL T G+ +AA
Sbjct: 191 EISTEEAHSSAMMFGCLYLELSVSLDHRTNDLLEAAVRAAR-GHSLGPGWTEGSPSAARR 249
Query: 136 KSNTTLVRASAVIVGSVDGNRIWGKE 161
+S T+ RA + G V + + G+E
Sbjct: 250 ESLTS--RAKRFLSGLVPRSHL-GRE 272
>TAIR|locus:2202280 [details] [associations]
symbol:ARA-2 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS;IDA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0003924 "GTPase
activity" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0007264 GO:GO:0009733
GO:GO:0015031 GO:GO:0003924 EMBL:AC068143 PROSITE:PS51419
eggNOG:COG1100 UniGene:At.133 UniGene:At.24592 KO:K07976
EMBL:D01024 EMBL:AF332428 EMBL:AY065306 EMBL:AY096439
IPI:IPI00533864 PIR:JS0639 RefSeq:NP_172128.1
ProteinModelPortal:P28185 SMR:P28185 STRING:P28185 PaxDb:P28185
PRIDE:P28185 EnsemblPlants:AT1G06400.1 GeneID:837151
KEGG:ath:AT1G06400 TAIR:At1g06400 HOGENOM:HOG000233968
InParanoid:P28185 OMA:HATFENA PhylomeDB:P28185
ProtClustDB:CLSN2914143 Genevestigator:P28185 GermOnline:AT1G06400
Uniprot:P28185
Length = 216
Score = 129 (50.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 47/151 (31%), Positives = 69/151 (45%)
Query: 10 GKV-RAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPA 64
GKV +A IW+ E+Y +TS+ G + ++Y + H ++ R E T P
Sbjct: 59 GKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPN 118
Query: 65 IIV---ANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRL-- 119
I+V NK DL AV +++AK A + F+E S NV+ +L QI
Sbjct: 119 IVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIV 178
Query: 120 -KRSLVQTGGAQAAAPWKSNTTLVRASAVIV 149
KRS V GG A P K T V+ ++
Sbjct: 179 SKRS-VDGGGESADLPGKGETINVKEDGSVL 208
>ASPGD|ASPL0000059035 [details] [associations]
symbol:rasA species:162425 "Emericella nidulans"
[GO:0009847 "spore germination" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=IMP;IDA] [GO:0075306 "regulation of conidium
formation" evidence=IMP] [GO:0048315 "conidium formation"
evidence=IMP] [GO:0007124 "pseudohyphal growth" evidence=IEA]
[GO:0030437 "ascospore formation" evidence=IEA] [GO:0000411
"positive regulation of transcription by galactose" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0090028
"positive regulation of pheromone-dependent signal transduction
involved in conjugation with cellular fusion" evidence=IEA]
[GO:0007051 "spindle organization" evidence=IEA] [GO:0007163
"establishment or maintenance of cell polarity" evidence=IEA]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IEA]
[GO:0043943 "regulation of asexual sporulation resulting in
formation of a cellular spore" evidence=IEA] [GO:0007097 "nuclear
migration" evidence=IEA] [GO:0043936 "asexual sporulation resulting
in formation of a cellular spore" evidence=IEA] [GO:0030448 "hyphal
growth" evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0033205
"cell cycle cytokinesis" evidence=IEA] [GO:0007329 "positive
regulation of transcription from RNA polymerase II promoter by
pheromones" evidence=IEA] [GO:0000750 "pheromone-dependent signal
transduction involved in conjugation with cellular fusion"
evidence=IEA] [GO:0009405 "pathogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030428 "cell septum" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0006184
"GTP catabolic process" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR005225 InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449
PROSITE:PS51421 SMART:SM00173 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 EMBL:BN001308 GO:GO:0003924
eggNOG:COG1100 EMBL:AACD01000005 KO:K07974 PANTHER:PTHR24070
HOGENOM:HOG000233973 OMA:MSKEGKK OrthoDB:EOG4578H0 EMBL:U03025
EMBL:U03023 PIR:A53778 RefSeq:XP_657786.1 ProteinModelPortal:Q12526
SMR:Q12526 EnsemblFungi:CADANIAT00002552 GeneID:2875958
KEGG:ani:AN0182.2 Uniprot:Q12526
Length = 212
Score = 126 (49.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 32/103 (31%), Positives = 55/103 (53%)
Query: 19 EQYEKLTSSDETGLIIVWMLYKPSYHRV---EQDVIRLHEEGYLRTRPAIIVANKIDLAR 75
EQY + + E L++ + + S+ + +Q ++R+ ++ Y P I+V NK DL +
Sbjct: 74 EQYMR---TGEGFLLVYSITSRQSFEEIMTFQQQILRVKDKDYF---PIIVVGNKCDLDK 127
Query: 76 ARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIR 118
R VS Q+ ++LA F KFIE S NV+ ++ +IR
Sbjct: 128 ERVVSEQEGESLARQFGCKFIETSAKSRINVENAFYDLVREIR 170
>DICTYBASE|DDB_G0269238 [details] [associations]
symbol:rab11A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0034394 "protein localization to
cell surface" evidence=IMP] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000331 "contractile vacuole" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0031164 "contractile
vacuolar membrane" evidence=IEA;IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA;IDA] [GO:0007231
"osmosensory signaling pathway" evidence=IMP] [GO:0005525 "GTP
binding" evidence=IEA;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA;IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005773 "vacuole" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0269238 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0045335 GO:GO:0015031
PROSITE:PS51419 GO:GO:0007231 GO:GO:0031164 GO:GO:0034394
eggNOG:COG1100 KO:K07976 OMA:AMGTRDD EMBL:U02925 RefSeq:XP_646557.1
ProteinModelPortal:P36412 SMR:P36412 MINT:MINT-6947977
STRING:P36412 PRIDE:P36412 EnsemblProtists:DDB0191190
GeneID:8617525 KEGG:ddi:DDB_G0269238 ProtClustDB:CLSZ2431439
Uniprot:P36412
Length = 214
Score = 125 (49.1 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 37/123 (30%), Positives = 62/123 (50%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSS---DETGLIIVWMLYKPS-YHRVEQDVIRLH 54
+++Q ++A +W+ E+Y +TS+ G ++V+ + K + Y VE+ ++ L
Sbjct: 53 RTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELR 112
Query: 55 EEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGIL 114
E R ++V NK DL R VS+ +AK + K+ FIE S NV+ IL
Sbjct: 113 ENAD-RNIEIMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNIL 171
Query: 115 NQI 117
QI
Sbjct: 172 TQI 174
>TAIR|locus:2124092 [details] [associations]
symbol:RABA1d "RAB GTPase homolog A1D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0031901 "early
endosome membrane" evidence=IDA] [GO:0032588 "trans-Golgi network
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0009506 GO:GO:0005794 GO:GO:0007264 GO:GO:0031901
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0032588 EMBL:AL161549
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 EMBL:AL035526
KO:K07976 HOGENOM:HOG000233968 ProtClustDB:CLSN2685455
EMBL:BT003901 EMBL:BT004936 EMBL:AK228509 IPI:IPI00535318
PIR:T04872 RefSeq:NP_193615.1 UniGene:At.24230 HSSP:P20339
ProteinModelPortal:Q9SN35 SMR:Q9SN35 IntAct:Q9SN35 PaxDb:Q9SN35
PRIDE:Q9SN35 EnsemblPlants:AT4G18800.1 GeneID:827614
KEGG:ath:AT4G18800 TAIR:At4g18800 InParanoid:Q9SN35 OMA:AMGTRDD
PhylomeDB:Q9SN35 Genevestigator:Q9SN35 Uniprot:Q9SN35
Length = 214
Score = 124 (48.7 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 44/154 (28%), Positives = 71/154 (46%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGY 58
+SL + ++A IW+ E+Y +TS+ G + ++Y + H ++V R E
Sbjct: 53 RSLNVNEKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELR 112
Query: 59 LRTRPAIIV---ANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILN 115
T P I+V NK DL AV ++DAK+ A + + F+E S NV+ +L
Sbjct: 113 DHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLT 172
Query: 116 QIR--LKRSLVQTGGAQAAAPWKSNTTLVRASAV 147
QI + + ++ G P K V SAV
Sbjct: 173 QIYHVVSKKAMEAGEDSGNVPSKGEKIDVDVSAV 206
>WB|WBGene00016935 [details] [associations]
symbol:ifta-1 species:6239 "Caenorhabditis elegans"
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0005932 "microtubule
basal body" evidence=IDA] [GO:0042073 "intraflagellar transport"
evidence=IDA] [GO:0006935 "chemotaxis" evidence=IMP] [GO:0035058
"nonmotile primary cilium assembly" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011990
InterPro:IPR015943 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0006935 Gene3D:1.25.40.10
GO:GO:0005932 GO:GO:0042073 GO:GO:0035085 GO:GO:0035058
GeneTree:ENSGT00610000085970 eggNOG:NOG263340 OMA:DENHPQE
InterPro:IPR017233 PIRSF:PIRSF037536 EMBL:FO080821 PIR:T15842
RefSeq:NP_508940.3 UniGene:Cel.24816 ProteinModelPortal:Q18859
SMR:Q18859 DIP:DIP-24733N MINT:MINT-1087476 STRING:Q18859
EnsemblMetazoa:C54G7.4 GeneID:183817 KEGG:cel:CELE_C54G7.4
UCSC:C54G7.4 CTD:183817 WormBase:C54G7.4 HOGENOM:HOG000020416
InParanoid:Q18859 NextBio:922466 Uniprot:Q18859
Length = 1199
Score = 115 (45.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 1 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKPSY 43
+NQ+L+GH+ V WNE +KLT+SD +GLIIVW ++ +
Sbjct: 61 VNQALEGHNATVMNATWNENNQKLTTSDTSGLIIVWGMFNEQW 103
Score = 65 (27.9 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 11/17 (64%), Positives = 15/17 (88%)
Query: 147 VIVGSVDGNRIWGKEFK 163
VIVG+++GNRIW KE +
Sbjct: 137 VIVGTLEGNRIWNKELE 153
>ASPGD|ASPL0000062894 [details] [associations]
symbol:srgE species:162425 "Emericella nidulans"
[GO:0034498 "early endosome to Golgi transport" evidence=IEA]
[GO:0033205 "cell cycle cytokinesis" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IEA] [GO:0071852
"fungal-type cell wall organization or biogenesis" evidence=IEA]
[GO:0006887 "exocytosis" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005741 "mitochondrial
outer membrane" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:BN001308
GO:GO:0015031 OMA:ERSAHDE ProteinModelPortal:C8VTZ0
EnsemblFungi:CADANIAT00002359 Uniprot:C8VTZ0
Length = 210
Score = 123 (48.4 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 43/138 (31%), Positives = 70/138 (50%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEE-- 56
+S+Q S ++A IW+ E+Y +TS+ G + ++Y S H+ +V R +E
Sbjct: 49 RSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELR 108
Query: 57 GYLRTRPAI-IVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILN 115
+ + I +V NK DL RAV +++AK A+ + FIE S NV+ IL
Sbjct: 109 DHADSNIVIMLVGNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILT 168
Query: 116 QI-RLKRSLV---QTGGA 129
+I R+ S ++GGA
Sbjct: 169 EIYRIVSSKALEGESGGA 186
>TAIR|locus:2086290 [details] [associations]
symbol:RABA1g "RAB GTPase homolog A1G" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0005829
"cytosol" evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0046686 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 EMBL:AP000370
KO:K07976 HOGENOM:HOG000233968 HSSP:P35278 EMBL:AK118727
EMBL:BT005565 IPI:IPI00529915 RefSeq:NP_188124.1 UniGene:At.24446
UniGene:At.70390 ProteinModelPortal:Q9LK99 SMR:Q9LK99 PaxDb:Q9LK99
PRIDE:Q9LK99 EnsemblPlants:AT3G15060.1 GeneID:820735
KEGG:ath:AT3G15060 TAIR:At3g15060 InParanoid:Q9LK99 OMA:DHTEANI
PhylomeDB:Q9LK99 ProtClustDB:CLSN2915648 Genevestigator:Q9LK99
Uniprot:Q9LK99
Length = 217
Score = 123 (48.4 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 45/149 (30%), Positives = 70/149 (46%)
Query: 12 VRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAII- 66
V+A IW+ E+Y +TS+ G + ++Y + H ++V R +E T I+
Sbjct: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVI 121
Query: 67 --VANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRSLV 124
V NK DL RAVS++DAK A F+E S NV+ +L+QI
Sbjct: 122 MLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQI------Y 175
Query: 125 QTGGAQAAAPWKSNTTLVRASAVIVGSVD 153
+ +A +TTL + ++ VGS D
Sbjct: 176 RVASKKALDIGDDHTTLPKGQSINVGSKD 204
>MGI|MGI:108054 [details] [associations]
symbol:Rit2 "Ras-like without CAAX 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
SMART:SM00173 MGI:MGI:108054 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005634 GO:GO:0007264 GO:GO:0003924
eggNOG:COG1100 HOVERGEN:HBG009351 PANTHER:PTHR24070
GeneTree:ENSGT00700000104060 OrthoDB:EOG4VDQ0C CTD:6014 KO:K07833
OMA:VYKIVIL EMBL:U71202 EMBL:AF084463 EMBL:AK040743 EMBL:AK046425
EMBL:AK046484 EMBL:AK138206 EMBL:AK139394 EMBL:AK140133
EMBL:AK140726 EMBL:AK162862 EMBL:AK162953 EMBL:BC018267
IPI:IPI00109248 RefSeq:NP_033091.1 UniGene:Mm.5163
ProteinModelPortal:P70425 SMR:P70425 IntAct:P70425 STRING:P70425
PaxDb:P70425 PRIDE:P70425 Ensembl:ENSMUST00000153060 GeneID:19762
KEGG:mmu:19762 UCSC:uc008ehx.1 InParanoid:P70425 ChiTaRS:RIT2
NextBio:297208 Bgee:P70425 CleanEx:MM_RIT2 Genevestigator:P70425
GermOnline:ENSMUSG00000057455 Uniprot:P70425
Length = 217
Score = 122 (48.0 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 63 PAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRS 122
P ++V NKIDL + R VS+++ NLA + F E S + +D+ G++ +IR K S
Sbjct: 127 PLVLVGNKIDLEQFRQVSTEEGMNLARDYNCAFFETSAALRFGIDDAFQGLVREIRRKES 186
Query: 123 LV 124
++
Sbjct: 187 ML 188
>TAIR|locus:2159285 [details] [associations]
symbol:RABA1f "RAB GTPase homolog A1F" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031 EMBL:AB015472
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968
HSSP:P20339 EMBL:AK118670 EMBL:BT005238 IPI:IPI00535677
RefSeq:NP_200894.1 UniGene:At.29139 UniGene:At.50545
ProteinModelPortal:Q9FJH0 SMR:Q9FJH0 IntAct:Q9FJH0 PaxDb:Q9FJH0
PRIDE:Q9FJH0 EnsemblPlants:AT5G60860.1 GeneID:836207
KEGG:ath:AT5G60860 TAIR:At5g60860 InParanoid:Q9FJH0 OMA:IHVDDKI
PhylomeDB:Q9FJH0 ProtClustDB:CLSN2916414 Genevestigator:Q9FJH0
Uniprot:Q9FJH0
Length = 217
Score = 122 (48.0 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 44/137 (32%), Positives = 65/137 (47%)
Query: 12 VRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAII- 66
V+A IW+ E+Y +TS+ G + ++Y + H ++V R +E T I+
Sbjct: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVI 121
Query: 67 --VANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIR--LKRS 122
V NK DL RAVS++DAK A F+E S NV+ +L+QI + R
Sbjct: 122 MFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRK 181
Query: 123 LVQTGGAQAAAPWKSNT 139
+ G AA P K T
Sbjct: 182 ALDIGDDPAALP-KGQT 197
>ZFIN|ZDB-GENE-041212-69 [details] [associations]
symbol:rab25a "RAB25, member RAS oncogene family a"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-041212-69 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
CTD:57111 EMBL:BC086715 IPI:IPI00488879 RefSeq:NP_001008641.1
UniGene:Dr.81751 ProteinModelPortal:Q5PRC5 SMR:Q5PRC5 GeneID:494098
KEGG:dre:494098 InParanoid:Q5PRC5 NextBio:20865605
ArrayExpress:Q5PRC5 Uniprot:Q5PRC5
Length = 210
Score = 121 (47.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGY 58
+S+Q S ++A IW+ E+Y +TS+ G + ++Y + H + V R +E Y
Sbjct: 50 RSVQVDSITIKAQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELY 109
Query: 59 LRTRPAIIV---ANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILN 115
P I+V NK DLA R V +++AK+ A + + F+E S NV+ + +L
Sbjct: 110 DHADPHIVVMLVGNKNDLATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLT 169
Query: 116 QIRLK 120
I K
Sbjct: 170 AIHQK 174
>WB|WBGene00013124 [details] [associations]
symbol:Y52B11A.4 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449
PROSITE:PS51421 GO:GO:0005525 GO:GO:0007264 GO:GO:0016020
GO:GO:0003924 PANTHER:PTHR24070 EMBL:AL032654
GeneTree:ENSGT00700000104060 eggNOG:NOG290112 PIR:T27108
RefSeq:NP_492856.1 ProteinModelPortal:Q9U254 SMR:Q9U254
PaxDb:Q9U254 EnsemblMetazoa:Y52B11A.4.1 EnsemblMetazoa:Y52B11A.4.2
GeneID:173003 KEGG:cel:CELE_Y52B11A.4 UCSC:Y52B11A.4 CTD:173003
WormBase:Y52B11A.4 HOGENOM:HOG000153604 InParanoid:Q9U254
OMA:RVRQFKI NextBio:877877 Uniprot:Q9U254
Length = 467
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/95 (29%), Positives = 52/95 (54%)
Query: 24 LTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQD 83
LT+ L++ + K S+ + + + + R P ++ NKIDL R R V+ Q+
Sbjct: 301 LTNEIHAFLVVYSIDSKSSWKQAMVALEMIRDRPGTRNLPTLVAGNKIDLERKRTVTKQE 360
Query: 84 AKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIR 118
+ A+ + E+SV + H+VD+LLVG++ +I+
Sbjct: 361 VRAAKAAMGFEHFEISVALDHDVDDLLVGLVAEIQ 395
>ZFIN|ZDB-GENE-120215-85 [details] [associations]
symbol:si:ch1073-112i17.1 "si:ch1073-112i17.1"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-120215-85 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104288 EMBL:CABZ01056446 EMBL:CABZ01056447
EMBL:CABZ01083287 EMBL:CABZ01083288 EMBL:CABZ01083289
EMBL:CABZ01100268 EMBL:CU530420 EMBL:CU694471
Ensembl:ENSDART00000151601 Uniprot:I3IRW5
Length = 224
Score = 118 (46.6 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 34/123 (27%), Positives = 61/123 (49%)
Query: 7 GHSGKVRAIIWN----EQYEKLTSS---DETGLIIVWMLY-KPSYHRVEQDVIRLHEEGY 58
G + KV +W+ E++ LT++ D G ++++ L + S+ V + +L Y
Sbjct: 70 GKTFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 129
Query: 59 LRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIR 118
++V NK DLA R V + AK LA + + + E S VD+ +V +L+ +
Sbjct: 130 CENPDIVLVGNKADLADQREVQEKQAKELADKYGIPYFETSAATGSEVDKAVVTLLDLV- 188
Query: 119 LKR 121
+KR
Sbjct: 189 MKR 191
>RGD|1307654 [details] [associations]
symbol:Rit2 "Ras-like without CAAX 2" species:10116 "Rattus
norvegicus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR005225 InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449
PROSITE:PS51421 SMART:SM00173 RGD:1307654 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005634
Reactome:REACT_111984 GO:GO:0007264 GO:GO:0003924 eggNOG:COG1100
HOVERGEN:HBG009351 PANTHER:PTHR24070 HOGENOM:HOG000233973
GeneTree:ENSGT00700000104060 OrthoDB:EOG4VDQ0C CTD:6014 KO:K07833
OMA:VYKIVIL EMBL:BC091382 IPI:IPI00363283 RefSeq:NP_001013078.1
UniGene:Rn.106719 ProteinModelPortal:Q5BJQ5 STRING:Q5BJQ5
PRIDE:Q5BJQ5 Ensembl:ENSRNOT00000023874 GeneID:291713
KEGG:rno:291713 UCSC:RGD:1307654 InParanoid:Q5BJQ5 NextBio:633064
Genevestigator:Q5BJQ5 GermOnline:ENSRNOG00000017568 Uniprot:Q5BJQ5
Length = 217
Score = 116 (45.9 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 63 PAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRS 122
P ++V NKIDL + R VS+++ LA + F E S + +D+ G++ +IR K S
Sbjct: 127 PLVLVGNKIDLEQFRQVSTEEGMTLARDYNCAFFETSAALRFGIDDAFQGLVREIRRKES 186
Query: 123 LV 124
++
Sbjct: 187 ML 188
>UNIPROTKB|Q96HU8 [details] [associations]
symbol:DIRAS2 "GTP-binding protein Di-Ras2" species:9606
"Homo sapiens" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR001806
InterPro:IPR005225 InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449
PROSITE:PS51421 SMART:SM00173 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0003924 EMBL:CH471089
eggNOG:COG1100 HOVERGEN:HBG009351 PANTHER:PTHR24070
HOGENOM:HOG000233973 OrthoDB:EOG46MBKP EMBL:AB076889 EMBL:AK122986
EMBL:AL353619 EMBL:BC008065 IPI:IPI00063302 RefSeq:NP_060064.2
UniGene:Hs.165636 PDB:2ERX PDBsum:2ERX ProteinModelPortal:Q96HU8
SMR:Q96HU8 IntAct:Q96HU8 STRING:Q96HU8 PhosphoSite:Q96HU8
DMDM:62286631 PaxDb:Q96HU8 PRIDE:Q96HU8 DNASU:54769
Ensembl:ENST00000375765 GeneID:54769 KEGG:hsa:54769 UCSC:uc004aqx.1
CTD:54769 GeneCards:GC09M093374 HGNC:HGNC:19323 HPA:HPA043758
MIM:607863 neXtProt:NX_Q96HU8 PharmGKB:PA134958969
InParanoid:Q96HU8 KO:K07841 OMA:RQVISCN PhylomeDB:Q96HU8
ChiTaRS:DIRAS2 EvolutionaryTrace:Q96HU8 GenomeRNAi:54769
NextBio:57425 Bgee:Q96HU8 CleanEx:HS_DIRAS2 Genevestigator:Q96HU8
GermOnline:ENSG00000165023 Uniprot:Q96HU8
Length = 199
Score = 114 (45.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 31/112 (27%), Positives = 62/112 (55%)
Query: 22 EKLTSSDETGLIIVWMLY-KPSYHRVEQDVIRLHE-EGYLRTRPAIIVANKIDLARARAV 79
++L+ S I+V+ + + S ++ ++ E +G + + P ++V NK D + +R V
Sbjct: 72 QRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPSREV 131
Query: 80 SSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQA 131
S +A+ LA ++K F+E S ++HNV EL +LN + + +Q G ++
Sbjct: 132 QSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQIDGKKS 183
>POMBASE|SPAC18G6.03 [details] [associations]
symbol:ypt3 "GTPase Ypt3" species:4896
"Schizosaccharomyces pombe" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=TAS]
[GO:0006887 "exocytosis" evidence=IMP] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IC] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0033205 "cell cycle cytokinesis"
evidence=IMP] [GO:0042144 "vacuole fusion, non-autophagic"
evidence=IMP] [GO:0071852 "fungal-type cell wall organization or
biogenesis" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC18G6.03 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0006886 GO:GO:0007264
GO:GO:0000139 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003924
GO:GO:0010008 GO:GO:0006887 PROSITE:PS51419 GO:GO:0033205
eggNOG:COG1100 GO:GO:0042144 GO:GO:0071852 KO:K07976
HOGENOM:HOG000233968 OMA:QKQIRDS OrthoDB:EOG41K2ND EMBL:X52100
EMBL:X52732 PIR:S10026 RefSeq:NP_593667.1 ProteinModelPortal:P17610
SMR:P17610 STRING:P17610 PRIDE:P17610 EnsemblFungi:SPAC18G6.03.1
GeneID:2542219 KEGG:spo:SPAC18G6.03 NextBio:20803288 Uniprot:P17610
Length = 214
Score = 115 (45.5 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 37/115 (32%), Positives = 59/115 (51%)
Query: 11 KVRAIIWN----EQYEKLTSS---DETGLIIVWMLYKPS-YHRVEQDVIRLHEEGYLRTR 62
K++A IW+ E+Y +TS+ G +IV+ + K S + V + + L E
Sbjct: 58 KIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNI- 116
Query: 63 PAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQI 117
++V NK DL RAVS+++A+ AA + FIE S NV+E +L +I
Sbjct: 117 VIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEI 171
>TAIR|locus:504954951 [details] [associations]
symbol:AT5G46025 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0007264 EMBL:AB006698 eggNOG:COG1100 KO:K07976
HOGENOM:HOG000233968 IPI:IPI00538449 RefSeq:NP_680401.1
UniGene:At.65643 ProteinModelPortal:Q3E8G1 SMR:Q3E8G1
EnsemblPlants:AT5G46025.1 GeneID:834643 KEGG:ath:AT5G46025
TAIR:At5g46025 InParanoid:Q3E8G1 OMA:HARYHRA PhylomeDB:Q3E8G1
Genevestigator:Q3E8G1 Uniprot:Q3E8G1
Length = 113
Score = 99 (39.9 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 32/90 (35%), Positives = 46/90 (51%)
Query: 31 GLIIVWMLYK-PSYHRVEQDVIRLHEEGYLRTRPAII--VANKIDLARARAVSSQDAKNL 87
G +IV+ + ++ VEQ + L G+ T +I V NK DL R VS ++AK+
Sbjct: 19 GALIVYDITSHTTFKNVEQWLKELR--GFFDTDKLMIMLVGNKSDLDHRREVSMEEAKSF 76
Query: 88 AASFKVKFIEVSVGIHHNVDELLVGILNQI 117
A K+ FIE S NV+E +L QI
Sbjct: 77 AEKEKLLFIETSALDATNVEECFTNVLTQI 106
>ZFIN|ZDB-GENE-050706-113 [details] [associations]
symbol:rab25b "RAB25, member RAS oncogene family b"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050706-113 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 KO:K07906 EMBL:BC098608 IPI:IPI00629715
RefSeq:NP_001025142.1 UniGene:Dr.152897 ProteinModelPortal:Q4KME3
SMR:Q4KME3 GeneID:574424 KEGG:dre:574424 InParanoid:Q4KME3
NextBio:20891932 Uniprot:Q4KME3
Length = 210
Score = 114 (45.2 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 40/129 (31%), Positives = 62/129 (48%)
Query: 12 VRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIV 67
++A IW+ E+Y +TS+ G + ++Y S H + R +E Y P I+V
Sbjct: 59 IKAQIWDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVV 118
Query: 68 ---ANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLK-RSL 123
NK DLA R+V ++DAK+ A + F E S NV+ +L +I K S
Sbjct: 119 MLVGNKSDLAAVRSVPTEDAKDFAEKNGLLFKETSALESVNVEAAFNTVLTEIHKKVNSK 178
Query: 124 VQTGGAQAA 132
T G+ +A
Sbjct: 179 EVTRGSISA 187
>TAIR|locus:2171943 [details] [associations]
symbol:RABA1c "RAB GTPase homolog A1C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005773
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
EMBL:AB012245 KO:K07976 HOGENOM:HOG000233968 EMBL:AF370219
EMBL:AY059111 EMBL:AY084274 IPI:IPI00534558 RefSeq:NP_199387.1
UniGene:At.7538 HSSP:Q15907 ProteinModelPortal:Q9FK68 SMR:Q9FK68
PaxDb:Q9FK68 PRIDE:Q9FK68 EnsemblPlants:AT5G45750.1 GeneID:834614
KEGG:ath:AT5G45750 TAIR:At5g45750 InParanoid:Q9FK68 OMA:QKQIRDS
PhylomeDB:Q9FK68 ProtClustDB:CLSN2685455 Genevestigator:Q9FK68
Uniprot:Q9FK68
Length = 216
Score = 114 (45.2 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 39/145 (26%), Positives = 66/145 (45%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGY 58
+SL ++A IW+ E+Y +TS+ G + ++Y + H ++V +E
Sbjct: 53 RSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELR 112
Query: 59 LRTRPAIIV---ANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILN 115
T P I+V NK DL AV ++DAK+ A + F+E S NV+ +L
Sbjct: 113 NHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLT 172
Query: 116 QIR--LKRSLVQTGGAQAAAPWKSN 138
QI + + ++ A P K +
Sbjct: 173 QIHHIVSKKAMEAASESANVPSKGD 197
>SGD|S000003178 [details] [associations]
symbol:YPT32 "Rab family GTPase involved in the exocytic
pathway" species:4932 "Saccharomyces cerevisiae" [GO:0015031
"protein transport" evidence=IEA] [GO:0006887 "exocytosis"
evidence=IEA;IMP] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=ISS;IDA;IPI] [GO:0016192 "vesicle-mediated
transport" evidence=IGI;IMP] [GO:0005741 "mitochondrial outer
membrane" evidence=IDA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0034498 "early endosome to Golgi transport" evidence=IGI]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005768 "endosome" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 SGD:S000003178
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0000139 EMBL:BK006941 GO:GO:0005741 GO:GO:0015031
GO:GO:0005768 GO:GO:0003924 GO:GO:0006887 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0034498 EMBL:U33754 EMBL:Z72732 KO:K07976
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
OrthoDB:EOG41K2ND EMBL:X72834 EMBL:AY558506 PIR:S58514
RefSeq:NP_011305.1 PDB:3RWM PDB:3RWO PDBsum:3RWM PDBsum:3RWO
ProteinModelPortal:P51996 SMR:P51996 DIP:DIP-6597N IntAct:P51996
MINT:MINT-703976 STRING:P51996 PaxDb:P51996 PeptideAtlas:P51996
PRIDE:P51996 EnsemblFungi:YGL210W GeneID:852662 KEGG:sce:YGL210W
NextBio:971948 Genevestigator:P51996 GermOnline:YGL210W
Uniprot:P51996
Length = 222
Score = 114 (45.2 bits), Expect = 0.00010, P = 0.00010
Identities = 39/127 (30%), Positives = 61/127 (48%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSS---DETGLIIVWMLYKPS-YHRVEQDVIRLH 54
++++ + K++A IW+ E+Y +TS+ G +IV+ + K S Y + L
Sbjct: 53 RTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELR 112
Query: 55 EEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVD----ELL 110
E +I NK DLA RAV + +AKN A ++ F E S NVD EL+
Sbjct: 113 ENADDNVAVGLI-GNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELI 171
Query: 111 VGILNQI 117
V I +
Sbjct: 172 VAIFQMV 178
>RGD|1559874 [details] [associations]
symbol:Rit1 "Ras-like without CAAX 1" species:10116 "Rattus
norvegicus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
SMART:SM00173 RGD:1559874 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0003924 PANTHER:PTHR24070
EMBL:CH473976 GeneTree:ENSGT00700000104060 CTD:6016 KO:K07832
OrthoDB:EOG4VDQ0C IPI:IPI00202073 RefSeq:NP_001102655.1
UniGene:Rn.50417 Ensembl:ENSRNOT00000027455 GeneID:499652
KEGG:rno:499652 UCSC:RGD:1559874 NextBio:703562 Uniprot:D3ZJH4
Length = 192
Score = 112 (44.5 bits), Expect = 0.00010, P = 0.00010
Identities = 34/140 (24%), Positives = 62/140 (44%)
Query: 2 NQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLY-KPSYHRVEQDVIRLHEEGYLR 60
N + +G+ +QY + + E G II + + + S+H V + ++
Sbjct: 43 NLDILDTAGQAEFTAMRDQYMR---AGE-GFIICYSITDRRSFHEVREFKQLIYRVRRTD 98
Query: 61 TRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLK 120
P ++V NK DL + R VS ++ +LA F F E S + +D++ ++ +IR K
Sbjct: 99 DTPVVLVGNKSDLKQLRQVSKEEGLSLAREFNCPFFETSAAYRYYIDDVFHALVREIRKK 158
Query: 121 RSLVQTGGAQAAAP----WK 136
+ + A P WK
Sbjct: 159 EKELVLAMEKKAKPKSSVWK 178
>DICTYBASE|DDB_G0292998 [details] [associations]
symbol:rasB "Ras GTPase" species:44689 "Dictyostelium
discoideum" [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0051726 "regulation of cell
cycle" evidence=IEP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0016363 "nuclear matrix" evidence=IDA]
[GO:0000910 "cytokinesis" evidence=IGI;IMP] [GO:0007265 "Ras
protein signal transduction" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=IEA;ISS] [GO:0051270 "regulation of cellular
component movement" evidence=IGI] [GO:0045806 "negative regulation
of endocytosis" evidence=IMP] [GO:0005525 "GTP binding"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR005225 InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449
PROSITE:PS51421 SMART:SM00173 dictyBase:DDB_G0292998 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007265 GO:GO:0045335
GenomeReviews:CM000155_GR GO:GO:0003924 GO:GO:0042127 GO:GO:0000910
GO:GO:0051726 GO:GO:0016363 eggNOG:COG1100 GO:GO:0051270
EMBL:AAFI02000199 KO:K07974 PANTHER:PTHR24070 GO:GO:0045806
EMBL:M96622 RefSeq:XP_629300.1 ProteinModelPortal:P32252 SMR:P32252
STRING:P32252 PRIDE:P32252 EnsemblProtists:DDB0201661
GeneID:8629023 KEGG:ddi:DDB_G0292998 OMA:DECFFEV
ProtClustDB:PTZ00369 Uniprot:P32252
Length = 197
Score = 112 (44.5 bits), Expect = 0.00012, P = 0.00012
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 46 VEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHN 105
V + +IR+ + + P ++V NK DL R V+ + LA SF V F+E S N
Sbjct: 99 VREQIIRVKDNDKV---PIVLVGNKCDLENLREVTEGEGSELAKSFSVPFLETSAKKRLN 155
Query: 106 VDELLVGILNQIRLKRSLVQTG 127
VDE ++ +I K+SL + G
Sbjct: 156 VDECFFEVVREI--KKSLKEPG 175
>WB|WBGene00004285 [details] [associations]
symbol:rab-37 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
KO:K07976 GeneTree:ENSGT00700000104031 EMBL:FO081187
UniGene:Cel.23034 GeneID:180696 KEGG:cel:CELE_W01H2.3 CTD:180696
NextBio:910498 RefSeq:NP_001041294.1 ProteinModelPortal:G5EFA6
SMR:G5EFA6 EnsemblMetazoa:W01H2.3b WormBase:W01H2.3b OMA:KLKYGFV
Uniprot:G5EFA6
Length = 223
Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
Identities = 37/130 (28%), Positives = 66/130 (50%)
Query: 11 KVRAIIWN----EQYEKLTSS---DETGLIIVW-MLYKPSYHRVEQDVIRLHEEGYLRTR 62
KV+ IW+ E++ +T+S D L++V+ + + S+ + ++ E G +
Sbjct: 78 KVKLQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQ 137
Query: 63 PAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQ-IRLKR 121
+V NK DL RA V + + K LA ++++ F+E S NVD +G+ + ++LK
Sbjct: 138 -VTLVGNKCDLPRA--VPTDEGKRLAEAYQIPFMETSAKTGFNVDRAFLGLAERMLKLKY 194
Query: 122 SLVQTGGAQA 131
V GG A
Sbjct: 195 GFVP-GGEMA 203
>ZFIN|ZDB-GENE-070912-329 [details] [associations]
symbol:rit1 "Ras-like without CAAX 1" species:7955
"Danio rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0006184
"GTP catabolic process" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR005225 InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449
PROSITE:PS51421 SMART:SM00173 ZFIN:ZDB-GENE-070912-329
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0003924 eggNOG:COG1100 HOVERGEN:HBG009351 PANTHER:PTHR24070
HOGENOM:HOG000233973 GeneTree:ENSGT00700000104060 CTD:6016
KO:K07832 OrthoDB:EOG4VDQ0C OMA:MERWLFL EMBL:BX548249 EMBL:BC163607
EMBL:BC163608 IPI:IPI00507020 RefSeq:NP_001122253.1
UniGene:Dr.80202 Ensembl:ENSDART00000100422
Ensembl:ENSDART00000126492 GeneID:793942 KEGG:dre:793942
NextBio:20931650 Uniprot:B3DJU3
Length = 211
Score = 112 (44.5 bits), Expect = 0.00015, P = 0.00015
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 63 PAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIR 118
P ++V NK DL R VS ++ K LA F+ F E S + +DE+ ++ QIR
Sbjct: 120 PVVLVGNKSDLVHLRQVSVEEGKQLAREFQCPFFETSAAFRYYIDEVFAALVRQIR 175
>WB|WBGene00022139 [details] [associations]
symbol:tub-2 species:6239 "Caenorhabditis elegans"
[GO:0005506 "iron ion binding" evidence=IEA] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0042597 "periplasmic space" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR009155 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07361 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 INTERPRO:IPR000007 Gene3D:2.130.10.10 GO:GO:0005506
GO:GO:0009055 GO:GO:0020037 GO:GO:0022900 GO:GO:0042597
InterPro:IPR025659 SUPFAM:SSF54518 Gene3D:3.20.90.10 Pfam:PF01167
PRINTS:PR01573 GeneTree:ENSGT00610000085970 eggNOG:NOG255100
HSSP:P50586 EMBL:FO081637 RefSeq:NP_490913.2
ProteinModelPortal:Q9BL53 SMR:Q9BL53 MINT:MINT-3386900 PaxDb:Q9BL53
EnsemblMetazoa:Y71G12A.3 GeneID:171758 KEGG:cel:CELE_Y71G12A.3
UCSC:Y71G12A.3 CTD:171758 WormBase:Y71G12A.3 HOGENOM:HOG000022247
InParanoid:Q9BL53 OMA:TSEERQF NextBio:872569 Uniprot:Q9BL53
Length = 869
Score = 92 (37.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 2 NQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWM 37
N +L+GH +R + WN+ KL S D +G+I VW+
Sbjct: 62 NFNLRGHHNAIRMVTWNKSQSKLASCDASGIIYVWV 97
Score = 74 (31.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 23/94 (24%), Positives = 40/94 (42%)
Query: 109 LLVGILNQIRLKRSLVQTGGAQAA-APWK--SNTTLV--RASAVIVGSVDGNRIWGKEFK 163
+ V + N R LV G + + W + L+ + V++GS +G R+W F
Sbjct: 93 IYVWVRNDDRWSVELVNDRGVKVSDLSWSPCGGSALICYDDNFVLIGSANGQRVWSNSFP 152
Query: 164 KTSML--GVQWTSDSQNLLFAIKGGQVHLYDYEG 195
+ + GV W DS+ L+ G + + G
Sbjct: 153 LPAAVTCGV-WAPDSRQLVLGFSTGTIQVLSNAG 185
>MGI|MGI:1915453 [details] [associations]
symbol:Diras2 "DIRAS family, GTP-binding RAS-like 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
SMART:SM00173 MGI:MGI:1915453 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0003924 eggNOG:COG1100
HOVERGEN:HBG009351 PANTHER:PTHR24070 HOGENOM:HOG000233973
OrthoDB:EOG46MBKP GeneTree:ENSGT00700000104149 CTD:54769 KO:K07841
OMA:RQVISCN ChiTaRS:DIRAS2 EMBL:BC086799 IPI:IPI00126551
RefSeq:NP_001019645.1 UniGene:Mm.29362 ProteinModelPortal:Q5PR73
SMR:Q5PR73 IntAct:Q5PR73 PhosphoSite:Q5PR73 PaxDb:Q5PR73
PRIDE:Q5PR73 Ensembl:ENSMUST00000057442 GeneID:68203 KEGG:mmu:68203
InParanoid:Q5PR73 NextBio:326698 Bgee:Q5PR73 CleanEx:MM_DIRAS2
Genevestigator:Q5PR73 GermOnline:ENSMUSG00000047842 Uniprot:Q5PR73
Length = 199
Score = 111 (44.1 bits), Expect = 0.00016, P = 0.00016
Identities = 31/112 (27%), Positives = 61/112 (54%)
Query: 22 EKLTSSDETGLIIVWMLY-KPSYHRVEQDVIRLHE-EGYLRTRPAIIVANKIDLARARAV 79
++L+ S I+V+ + + S ++ ++ E +G + + P ++V NK D + R V
Sbjct: 72 QRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPNREV 131
Query: 80 SSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQA 131
S +A+ LA ++K F+E S ++HNV EL +LN + + +Q G ++
Sbjct: 132 QSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQIDGKKS 183
>RGD|1305580 [details] [associations]
symbol:Diras2 "DIRAS family, GTP-binding RAS-like 2"
species:10116 "Rattus norvegicus" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001806
InterPro:IPR005225 InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449
PROSITE:PS51421 SMART:SM00173 RGD:1305580 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020 GO:GO:0003924
PANTHER:PTHR24070 OrthoDB:EOG46MBKP GeneTree:ENSGT00700000104149
CTD:54769 KO:K07841 OMA:RQVISCN IPI:IPI00194649
RefSeq:NP_001163049.1 UniGene:Rn.214733 ProteinModelPortal:D3ZHX3
SMR:D3ZHX3 PRIDE:D3ZHX3 Ensembl:ENSRNOT00000044842 GeneID:291006
KEGG:rno:291006 NextBio:631979 Uniprot:D3ZHX3
Length = 199
Score = 111 (44.1 bits), Expect = 0.00016, P = 0.00016
Identities = 31/112 (27%), Positives = 61/112 (54%)
Query: 22 EKLTSSDETGLIIVWMLY-KPSYHRVEQDVIRLHE-EGYLRTRPAIIVANKIDLARARAV 79
++L+ S I+V+ + + S ++ ++ E +G + + P ++V NK D + R V
Sbjct: 72 QRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPNREV 131
Query: 80 SSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQA 131
S +A+ LA ++K F+E S ++HNV EL +LN + + +Q G ++
Sbjct: 132 QSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQIDGKKS 183
>UNIPROTKB|Q8HZJ5 [details] [associations]
symbol:RAB27B "Ras-related protein Rab-27B" species:9913
"Bos taurus" [GO:0019003 "GDP binding" evidence=ISS] [GO:0005525
"GTP binding" evidence=ISS] [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0071985 "multivesicular body sorting pathway"
evidence=IEA] [GO:0045921 "positive regulation of exocytosis"
evidence=IEA] [GO:0032585 "multivesicular body membrane"
evidence=IEA] [GO:0030140 "trans-Golgi network transport vesicle"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005795 "Golgi stack" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0005795
GO:GO:0032585 PROSITE:PS51419 GO:GO:0030140 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 GO:GO:0071985
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104288 OrthoDB:EOG4PRSRM
EMBL:AY010899 IPI:IPI00718679 RefSeq:NP_777163.1 UniGene:Bt.12771
ProteinModelPortal:Q8HZJ5 SMR:Q8HZJ5 PRIDE:Q8HZJ5
Ensembl:ENSBTAT00000003613 GeneID:282858 KEGG:bta:282858 CTD:5874
InParanoid:Q8HZJ5 KO:K07886 OMA:QNVEKSV NextBio:20806387
Uniprot:Q8HZJ5
Length = 218
Score = 112 (44.5 bits), Expect = 0.00017, P = 0.00017
Identities = 31/123 (25%), Positives = 62/123 (50%)
Query: 7 GHSGKVRAIIWN----EQYEKLTSS---DETGLIIVWMLY-KPSYHRVEQDVIRLHEEGY 58
G + KV +W+ E++ LT++ D G ++++ L + S+ V + +L Y
Sbjct: 63 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122
Query: 59 LRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIR 118
+++ NK DL R V+ + A++LA + + + E S NV++ + +L+ I
Sbjct: 123 CENPDIVLIGNKADLPDQREVNERQARDLAEKYSIPYFETSAATGQNVEKAVETLLDLI- 181
Query: 119 LKR 121
+KR
Sbjct: 182 MKR 184
>TAIR|locus:2018698 [details] [associations]
symbol:RABA1i "RAB GTPase homolog A1I" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009827 "plant-type
cell wall modification" evidence=RCA] [GO:0009860 "pollen tube
growth" evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC010155 EMBL:AC007508
KO:K07976 HOGENOM:HOG000233968 HSSP:P35278 ProtClustDB:CLSN2679642
EMBL:DQ056467 IPI:IPI00536131 RefSeq:NP_174177.1 UniGene:At.51281
ProteinModelPortal:Q9S810 SMR:Q9S810 PaxDb:Q9S810 PRIDE:Q9S810
EnsemblPlants:AT1G28550.1 GeneID:839755 KEGG:ath:AT1G28550
TAIR:At1g28550 InParanoid:Q9S810 OMA:HDSRATI PhylomeDB:Q9S810
Genevestigator:Q9S810 Uniprot:Q9S810
Length = 218
Score = 112 (44.5 bits), Expect = 0.00017, P = 0.00017
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGY 58
+S+Q V+A IW+ E+Y +TS+ G + ++Y + H ++V R +E
Sbjct: 53 RSIQCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR 112
Query: 59 LRTRPAII---VANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILN 115
T I+ V NK DL RA+S+++AK A F+E S NVD +L
Sbjct: 113 DHTDANIVIMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLT 172
Query: 116 QI 117
QI
Sbjct: 173 QI 174
>MGI|MGI:108053 [details] [associations]
symbol:Rit1 "Ras-like without CAAX 1" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005525 "GTP binding" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR020849
Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421 SMART:SM00173
MGI:MGI:108053 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0003924 eggNOG:COG1100 CleanEx:MM_RIT1
HOVERGEN:HBG009351 PANTHER:PTHR24070 HOGENOM:HOG000233973
GeneTree:ENSGT00700000104060 CTD:6016 KO:K07832 OrthoDB:EOG4VDQ0C
EMBL:U71205 EMBL:AK005357 EMBL:AK014126 EMBL:BC012694
IPI:IPI00109252 RefSeq:NP_033095.1 UniGene:Mm.4009
ProteinModelPortal:P70426 SMR:P70426 STRING:P70426
PhosphoSite:P70426 PRIDE:P70426 Ensembl:ENSMUST00000029692
GeneID:19769 KEGG:mmu:19769 UCSC:uc008pwh.2 InParanoid:P70426
OMA:MERWLFL NextBio:297224 Bgee:P70426 Genevestigator:P70426
GermOnline:ENSMUSG00000028057 Uniprot:P70426
Length = 219
Score = 112 (44.5 bits), Expect = 0.00017, P = 0.00017
Identities = 34/140 (24%), Positives = 62/140 (44%)
Query: 2 NQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLY-KPSYHRVEQDVIRLHEEGYLR 60
N + +G+ +QY + + E G II + + + S+H V + ++
Sbjct: 70 NLDILDTAGQAEFTAMRDQYMR---AGE-GFIICYSITDRRSFHEVREFKQLIYRVRRTD 125
Query: 61 TRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLK 120
P ++V NK DL + R VS ++ +LA F F E S + +D++ ++ +IR K
Sbjct: 126 DTPVVLVGNKSDLKQLRQVSKEEGLSLAREFSCPFFETSAAYRYYIDDVFHALVREIRKK 185
Query: 121 RSLVQTGGAQAAAP----WK 136
+ + A P WK
Sbjct: 186 EKELVLAMEKKAKPKNSVWK 205
>UNIPROTKB|F1PH82 [details] [associations]
symbol:RIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
SMART:SM00173 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0016020 GO:GO:0003924 PANTHER:PTHR24070
GeneTree:ENSGT00700000104060 EMBL:AAEX03005386
Ensembl:ENSCAFT00000028057 Uniprot:F1PH82
Length = 209
Score = 111 (44.1 bits), Expect = 0.00019, P = 0.00019
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 63 PAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRS 122
P ++V NKIDL + R VS+++ +LA + F E S + +D+ G++ +IR K S
Sbjct: 119 PLVLVGNKIDLEQFRQVSTEEGLSLAREYNCAFFETSAALRFCIDDAFHGLVREIRKKES 178
Query: 123 L 123
+
Sbjct: 179 M 179
>UNIPROTKB|E1C6J7 [details] [associations]
symbol:RAB17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005622 CTD:64284 KO:K07909 OMA:KLLFMET
GeneTree:ENSGT00640000091139 EMBL:AADN02034487 IPI:IPI00574832
RefSeq:XP_421874.2 UniGene:Gga.8154 Ensembl:ENSGALT00000006196
GeneID:424017 KEGG:gga:424017 NextBio:20826403 Uniprot:E1C6J7
Length = 213
Score = 111 (44.1 bits), Expect = 0.00021, P = 0.00021
Identities = 37/141 (26%), Positives = 71/141 (50%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLY----KPSYHRVEQDVIRLH 54
Q++Q + ++ IW+ E+Y + G ++Y K + +R +Q ++ L
Sbjct: 58 QTIQLETATIKLEIWDTAGQEKYHSVCHLYYRGAHAALLVYDLTNKETLNRAKQWLMELE 117
Query: 55 EEGYLRTRPAI-IVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGI 113
+E +L I +V NK DLA R V+++D + A S + F+E S +H V+++ + +
Sbjct: 118 KE-FLPDEIVIALVGNKTDLADEREVAAEDGEEFARSRSLLFMETSAKSNHQVNDVFMAV 176
Query: 114 LNQIRLKRSLVQTGGAQAAAP 134
++ L+R G +AA P
Sbjct: 177 AQEL-LRRE-----GKKAAVP 191
>UNIPROTKB|C9J8Q6 [details] [associations]
symbol:MRAS "Ras-related protein M-Ras" species:9606 "Homo
sapiens" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR020849 Pfam:PF00071
PROSITE:PS51421 GO:GO:0005525 GO:GO:0007264 GO:GO:0016020
GO:GO:0003924 PANTHER:PTHR24070 HOGENOM:HOG000233973 EMBL:AC022337
EMBL:AC022497 HGNC:HGNC:7227 ChiTaRS:MRAS IPI:IPI00982726
ProteinModelPortal:C9J8Q6 SMR:C9J8Q6 STRING:C9J8Q6
Ensembl:ENST00000494949 ArrayExpress:C9J8Q6 Bgee:C9J8Q6
Uniprot:C9J8Q6
Length = 107
Score = 95 (38.5 bits), Expect = 0.00021, P = 0.00021
Identities = 31/105 (29%), Positives = 54/105 (51%)
Query: 19 EQYEKLTSSDETGLIIVWMLY-KPSYHRVE---QDVIRLHEEGYLRTRPAIIVANKIDLA 74
EQY + + D G +IV+ + K S+ V+ Q ++R+ + + P I+VANK+DL
Sbjct: 3 EQY--MRTGD--GFLIVYSVTDKASFEHVDRFHQLILRVKDR---ESFPMILVANKVDLM 55
Query: 75 RARAVSSQDAKNLAASFKVKFIEVSVGIHH-NVDELLVGILNQIR 118
R ++ + K +A + +IE S NVD+ ++ IR
Sbjct: 56 HLRKITREQGKEMATKHNIPYIETSAKDPPLNVDKAFHDLVRVIR 100
>UNIPROTKB|Q6PJZ0 [details] [associations]
symbol:RAB17 "RAB17 protein" species:9606 "Homo sapiens"
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 Pfam:PF00071 GO:GO:0005525 GO:GO:0007264
EMBL:CH471063 HOGENOM:HOG000233968 EMBL:AC104667 RefSeq:NP_071894.1
UniGene:Hs.44278 DNASU:64284 GeneID:64284 KEGG:hsa:64284 CTD:64284
HGNC:HGNC:16523 PharmGKB:PA34105 KO:K07909 GenomeRNAi:64284
NextBio:66211 EMBL:BC007907 EMBL:BC009827 IPI:IPI00917363
SMR:Q6PJZ0 STRING:Q6PJZ0 Ensembl:ENST00000409822
Ensembl:ENST00000538644 Uniprot:Q6PJZ0
Length = 85
Score = 95 (38.5 bits), Expect = 0.00021, P = 0.00021
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 65 IIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRS 122
++V NK DL++ R V+ Q+ K A S K+ F+E S ++H V E+ + ++ L+RS
Sbjct: 1 MLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQEL-LQRS 57
>UNIPROTKB|F1RN13 [details] [associations]
symbol:LOC100739440 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
SMART:SM00173 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0016020 GO:GO:0003924 PANTHER:PTHR24070
GeneTree:ENSGT00700000104149 KO:K07841 OMA:RQVISCN EMBL:FP565650
EMBL:CT990612 RefSeq:XP_003483425.1 Ensembl:ENSSSCT00000029621
Ensembl:ENSSSCT00000030359 GeneID:100739440 KEGG:ssc:100739440
Uniprot:F1RN13
Length = 199
Score = 110 (43.8 bits), Expect = 0.00021, P = 0.00021
Identities = 31/112 (27%), Positives = 60/112 (53%)
Query: 22 EKLTSSDETGLIIVWMLY-KPSYHRVEQDVIRLHE-EGYLRTRPAIIVANKIDLARARAV 79
++L+ S I+V+ + + S ++ ++ E +G + + P ++V NK D + R V
Sbjct: 72 QRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPNREV 131
Query: 80 SSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQA 131
S +A+ LA +K F+E S ++HNV EL +LN + + +Q G ++
Sbjct: 132 ESSEAEALARKWKCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQIDGKKS 183
>UNIPROTKB|I3LCQ9 [details] [associations]
symbol:KRAS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051146 "striated muscle cell differentiation"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0035022 "positive
regulation of Rac protein signal transduction" evidence=IEA]
[GO:0032228 "regulation of synaptic transmission, GABAergic"
evidence=IEA] [GO:0030036 "actin cytoskeleton organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0010628
"positive regulation of gene expression" evidence=IEA] [GO:0008542
"visual learning" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0001934 "positive regulation
of protein phosphorylation" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
SMART:SM00173 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0016020 GO:GO:0030036 GO:GO:0008284 GO:GO:0003924
GO:GO:0008542 GO:GO:0043524 GO:GO:0032228 GO:GO:0010628
GO:GO:0001934 GO:GO:0051146 GO:GO:0035022 GO:GO:0048169
PANTHER:PTHR24070 GeneTree:ENSGT00690000101785 OMA:MSKEGKK
EMBL:FP089548 Ensembl:ENSSSCT00000025989 Uniprot:I3LCQ9
Length = 216
Score = 111 (44.1 bits), Expect = 0.00022, P = 0.00022
Identities = 25/104 (24%), Positives = 51/104 (49%)
Query: 63 PAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRS 122
P ++V NK DL +R V ++ A++LA S+ + FIE S VD+ ++ +IR +
Sbjct: 110 PMVLVGNKCDLP-SRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREIRKHKE 168
Query: 123 LVQTGGAQAAAPWKSNTTLVRASAVIVGSVDGNRIWGKEFKKTS 166
+ G + K+ ++ +A+++ +++ TS
Sbjct: 169 KMSKDGKKKKKKSKTKCIIIFIAALVISMKASHQVTSNSLHLTS 212
>UNIPROTKB|J9NUC1 [details] [associations]
symbol:RIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
SMART:SM00173 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0016020 GO:GO:0003924 PANTHER:PTHR24070
GeneTree:ENSGT00700000104060 CTD:6014 KO:K07833 OMA:VYKIVIL
EMBL:AAEX03005386 RefSeq:XP_547597.3 Ensembl:ENSCAFT00000044906
GeneID:490475 KEGG:cfa:490475 Uniprot:J9NUC1
Length = 217
Score = 111 (44.1 bits), Expect = 0.00022, P = 0.00022
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 63 PAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRS 122
P ++V NKIDL + R VS+++ +LA + F E S + +D+ G++ +IR K S
Sbjct: 127 PLVLVGNKIDLEQFRQVSTEEGLSLAREYNCAFFETSAALRFCIDDAFHGLVREIRKKES 186
Query: 123 L 123
+
Sbjct: 187 M 187
>UNIPROTKB|Q3MHP2 [details] [associations]
symbol:RAB11B "Ras-related protein Rab-11B" species:9913
"Bos taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0005525 "GTP binding"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0003924
"GTPase activity" evidence=ISS] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7 EMBL:BC105162
IPI:IPI00718152 RefSeq:NP_001030468.1 UniGene:Bt.4347
ProteinModelPortal:Q3MHP2 SMR:Q3MHP2 STRING:Q3MHP2 PRIDE:Q3MHP2
Ensembl:ENSBTAT00000003206 GeneID:532723 KEGG:bta:532723 CTD:9230
InParanoid:Q3MHP2 KO:K07905 OMA:ERSAHDE NextBio:20875786
Uniprot:Q3MHP2
Length = 218
Score = 111 (44.1 bits), Expect = 0.00022, P = 0.00022
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEE-- 56
+S+Q ++A IW+ E+Y +TS+ G + ++Y + H ++V R +E
Sbjct: 51 RSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR 110
Query: 57 GYLRTRPAI-IVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILN 115
+ + I +V NK DL RAV + +A+ A + FIE S NV+E IL
Sbjct: 111 DHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
Query: 116 QI 117
+I
Sbjct: 171 EI 172
>UNIPROTKB|J9JHN1 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101664 CTD:9230 KO:K07905 OMA:ERSAHDE
EMBL:AAEX03012474 EMBL:AAEX03012473 RefSeq:XP_854399.2
ProteinModelPortal:J9JHN1 Ensembl:ENSCAFT00000048184 GeneID:611619
KEGG:cfa:611619 Uniprot:J9JHN1
Length = 218
Score = 111 (44.1 bits), Expect = 0.00022, P = 0.00022
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEE-- 56
+S+Q ++A IW+ E+Y +TS+ G + ++Y + H ++V R +E
Sbjct: 51 RSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR 110
Query: 57 GYLRTRPAI-IVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILN 115
+ + I +V NK DL RAV + +A+ A + FIE S NV+E IL
Sbjct: 111 DHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
Query: 116 QI 117
+I
Sbjct: 171 EI 172
>UNIPROTKB|Q15907 [details] [associations]
symbol:RAB11B "Ras-related protein Rab-11B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005525
"GTP binding" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0032402 "melanosome transport" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0006184 "GTP catabolic
process" evidence=IDA;TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0016023
GO:GO:0055037 GO:GO:0007049 EMBL:CH471139 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE EMBL:X79780 EMBL:AF498947 EMBL:AK312994 EMBL:BT019536
EMBL:BC110081 IPI:IPI00020436 PIR:JC2487 RefSeq:NP_004209.2
UniGene:Hs.626404 PDB:2F9L PDB:2F9M PDBsum:2F9L PDBsum:2F9M
ProteinModelPortal:Q15907 SMR:Q15907 IntAct:Q15907 STRING:Q15907
PhosphoSite:Q15907 DMDM:38258938 PaxDb:Q15907 PeptideAtlas:Q15907
PRIDE:Q15907 DNASU:9230 Ensembl:ENST00000328024 GeneID:9230
KEGG:hsa:9230 UCSC:uc002mju.4 GeneCards:GC19P008455 HGNC:HGNC:9761
MIM:604198 neXtProt:NX_Q15907 PharmGKB:PA34102 InParanoid:Q15907
PhylomeDB:Q15907 ChiTaRS:RAB11B EvolutionaryTrace:Q15907
GenomeRNAi:9230 NextBio:34597 Bgee:Q15907 CleanEx:HS_RAB11B
Genevestigator:Q15907 GermOnline:ENSG00000185236 Uniprot:Q15907
Length = 218
Score = 111 (44.1 bits), Expect = 0.00022, P = 0.00022
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEE-- 56
+S+Q ++A IW+ E+Y +TS+ G + ++Y + H ++V R +E
Sbjct: 51 RSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR 110
Query: 57 GYLRTRPAI-IVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILN 115
+ + I +V NK DL RAV + +A+ A + FIE S NV+E IL
Sbjct: 111 DHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
Query: 116 QI 117
+I
Sbjct: 171 EI 172
>UNIPROTKB|F2Z5J9 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019003 "GDP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0019003 GeneTree:ENSGT00690000101664 CTD:9230
KO:K07905 OMA:ERSAHDE EMBL:FP090904 RefSeq:NP_001231804.1
UniGene:Ssc.5570 ProteinModelPortal:F2Z5J9 SMR:F2Z5J9 PRIDE:F2Z5J9
Ensembl:ENSSSCT00000014854 GeneID:100513782 KEGG:ssc:100513782
Uniprot:F2Z5J9
Length = 218
Score = 111 (44.1 bits), Expect = 0.00022, P = 0.00022
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEE-- 56
+S+Q ++A IW+ E+Y +TS+ G + ++Y + H ++V R +E
Sbjct: 51 RSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR 110
Query: 57 GYLRTRPAI-IVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILN 115
+ + I +V NK DL RAV + +A+ A + FIE S NV+E IL
Sbjct: 111 DHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
Query: 116 QI 117
+I
Sbjct: 171 EI 172
>MGI|MGI:99425 [details] [associations]
symbol:Rab11b "RAB11B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=ISO] [GO:0019003
"GDP binding" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:99425 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0003924 GO:GO:0016023
GO:GO:0007049 PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100
GO:GO:0019003 GO:GO:0032402 HOVERGEN:HBG009351 GO:GO:0033572
HOGENOM:HOG000233968 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE ChiTaRS:RAB11B EMBL:L26528 EMBL:BC054753 EMBL:BC085270
IPI:IPI00135869 PIR:A55005 RefSeq:NP_033023.1 UniGene:Mm.387587
ProteinModelPortal:P46638 SMR:P46638 IntAct:P46638 STRING:P46638
PhosphoSite:P46638 PaxDb:P46638 PRIDE:P46638
Ensembl:ENSMUST00000057373 GeneID:19326 KEGG:mmu:19326
InParanoid:P46638 NextBio:296291 Bgee:P46638 CleanEx:MM_RAB11B
Genevestigator:P46638 GermOnline:ENSMUSG00000002290 GO:GO:2001135
Uniprot:P46638
Length = 218
Score = 111 (44.1 bits), Expect = 0.00022, P = 0.00022
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEE-- 56
+S+Q ++A IW+ E+Y +TS+ G + ++Y + H ++V R +E
Sbjct: 51 RSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR 110
Query: 57 GYLRTRPAI-IVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILN 115
+ + I +V NK DL RAV + +A+ A + FIE S NV+E IL
Sbjct: 111 DHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
Query: 116 QI 117
+I
Sbjct: 171 EI 172
>RGD|620114 [details] [associations]
symbol:Rab27b "RAB27B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO;ISS] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0005795 "Golgi stack" evidence=IEA;ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016324 "apical plasma membrane" evidence=IDA] [GO:0017157
"regulation of exocytosis" evidence=IDA] [GO:0019003 "GDP binding"
evidence=ISO;ISS] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0030140 "trans-Golgi network transport
vesicle" evidence=IEA;ISO] [GO:0030667 "secretory granule membrane"
evidence=IDA] [GO:0032585 "multivesicular body membrane"
evidence=IEA;ISO] [GO:0042589 "zymogen granule membrane"
evidence=IDA] [GO:0045921 "positive regulation of exocytosis"
evidence=IEA;ISO] [GO:0071985 "multivesicular body sorting pathway"
evidence=IEA;ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620114 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0016324 GO:GO:0003924 GO:GO:0005795
GO:GO:0032585 PROSITE:PS51419 GO:GO:0030140 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 GO:GO:0017157
GO:GO:0042589 GO:GO:0071985 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104288 OrthoDB:EOG4PRSRM CTD:5874 KO:K07886
OMA:QNVEKSV EMBL:AF325693 IPI:IPI00200425 RefSeq:NP_445911.1
UniGene:Rn.112603 ProteinModelPortal:Q99P74 SMR:Q99P74
STRING:Q99P74 PRIDE:Q99P74 Ensembl:ENSRNOT00000016369 GeneID:84590
KEGG:rno:84590 InParanoid:Q99P74 NextBio:617189
Genevestigator:Q99P74 GermOnline:ENSRNOG00000012176 Uniprot:Q99P74
Length = 218
Score = 111 (44.1 bits), Expect = 0.00022, P = 0.00022
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 3 QSLQGHSGK---VRAIIWN----EQYEKLTSS---DETGLIIVWMLY-KPSYHRVEQDVI 51
Q G SGK V +W+ E++ LT++ D G ++++ L + S+ V +
Sbjct: 56 QGADGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMS 115
Query: 52 RLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLV 111
+L Y +++ NK DL R V+ + A+ LA + + + E S NV++ +
Sbjct: 116 QLQANAYCENPDIVLIGNKADLLDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVE 175
Query: 112 GILNQIRLKR 121
+L+ I +KR
Sbjct: 176 TLLDLI-MKR 184
>RGD|68369 [details] [associations]
symbol:Rab11b "RAB11B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;ISS]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=ISO] [GO:0006928 "cellular component
movement" evidence=NAS] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=ISO;ISS] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0032402 "melanosome transport"
evidence=ISS] [GO:0045335 "phagocytic vesicle" evidence=ISO;ISS]
[GO:0055037 "recycling endosome" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:68369 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0006928 GO:GO:0016023 GO:GO:0055037
GO:GO:0007049 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE EMBL:D01046 EMBL:AF286534 EMBL:BC062041 IPI:IPI00210381
RefSeq:NP_116006.1 UniGene:Rn.124832 ProteinModelPortal:O35509
SMR:O35509 IntAct:O35509 STRING:O35509 PhosphoSite:O35509
PRIDE:O35509 Ensembl:ENSRNOT00000010197 GeneID:79434 KEGG:rno:79434
UCSC:RGD:68369 InParanoid:O35509 NextBio:614803
Genevestigator:O35509 GermOnline:ENSRNOG00000007648 Uniprot:O35509
Length = 218
Score = 111 (44.1 bits), Expect = 0.00022, P = 0.00022
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEE-- 56
+S+Q ++A IW+ E+Y +TS+ G + ++Y + H ++V R +E
Sbjct: 51 RSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR 110
Query: 57 GYLRTRPAI-IVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILN 115
+ + I +V NK DL RAV + +A+ A + FIE S NV+E IL
Sbjct: 111 DHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
Query: 116 QI 117
+I
Sbjct: 171 EI 172
>UNIPROTKB|P11233 [details] [associations]
symbol:RALA "Ras-related protein Ral-A" species:9606 "Homo
sapiens" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0019048 "virus-host
interaction" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0051665 "membrane raft localization"
evidence=IDA] [GO:0017157 "regulation of exocytosis" evidence=IDA]
[GO:0031755 "Edg-2 lysophosphatidic acid receptor binding"
evidence=IDA] [GO:0009986 "cell surface" evidence=IDA] [GO:0030139
"endocytic vesicle" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IDA] [GO:0032154 "cleavage furrow" evidence=IDA]
[GO:0006935 "chemotaxis" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0007265 "Ras protein signal
transduction" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0031532 "actin cytoskeleton
reorganization" evidence=IDA] [GO:0051491 "positive regulation of
filopodium assembly" evidence=IDA] Reactome:REACT_11123
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR020849
Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421 SMART:SM00173
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
Pathway_Interaction_DB:foxopathway Reactome:REACT_111102
GO:GO:0048011 GO:GO:0007265 GO:GO:0019048 GO:GO:0009986
EMBL:CH471073 GO:GO:0003924 GO:GO:0006935 GO:GO:0007049
GO:GO:0000910 GO:GO:0031532
Pathway_Interaction_DB:arf6_traffickingpathway GO:GO:0006887
GO:GO:0051491 GO:GO:0030496 EMBL:CH236951 GO:GO:0032154
eggNOG:COG1100 GO:GO:0031755
Pathway_Interaction_DB:p38alphabetapathway HOVERGEN:HBG009351
GO:GO:0017157 PANTHER:PTHR24070 HOGENOM:HOG000233973 PDB:1UAD
PDBsum:1UAD PDB:1ZC3 PDB:1ZC4 PDBsum:1ZC3 PDBsum:1ZC4 CTD:5898
KO:K07834 OMA:SKATSGR EMBL:X15014 EMBL:M29893 EMBL:AF493910
EMBL:AC004837 EMBL:BC039858 IPI:IPI00217519 PIR:S04596
RefSeq:NP_005393.2 UniGene:Hs.6906 PDB:2A78 PDB:2A9K PDB:2BOV
PDBsum:2A78 PDBsum:2A9K PDBsum:2BOV ProteinModelPortal:P11233
SMR:P11233 IntAct:P11233 MINT:MINT-238571 STRING:P11233
PhosphoSite:P11233 DMDM:131834 PaxDb:P11233 PRIDE:P11233
Ensembl:ENST00000005257 GeneID:5898 KEGG:hsa:5898 UCSC:uc003thd.3
GeneCards:GC07P039663 HGNC:HGNC:9839 MIM:179550 neXtProt:NX_P11233
PharmGKB:PA34197 InParanoid:P11233 OrthoDB:EOG4HX524
PhylomeDB:P11233 ChiTaRS:Rala EvolutionaryTrace:P11233
GenomeRNAi:5898 NextBio:22942 ArrayExpress:P11233 Bgee:P11233
CleanEx:HS_RALA Genevestigator:P11233 GermOnline:ENSG00000006451
GO:GO:0051665 Uniprot:P11233
Length = 206
Score = 110 (43.8 bits), Expect = 0.00024, P = 0.00024
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 48 QDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVD 107
+ ++R+ E+ + P ++V NK DL R VS ++AKN A + V ++E S NVD
Sbjct: 109 EQILRVKEDENV---PFLLVGNKSDLEDKRQVSVEEAKNRAEQWNVNYVETSAKTRANVD 165
Query: 108 ELLVGILNQIRLKR 121
++ ++ +IR ++
Sbjct: 166 KVFFDLMREIRARK 179
>UNIPROTKB|E1C880 [details] [associations]
symbol:RIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
SMART:SM00173 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0016020 GO:GO:0003924 PANTHER:PTHR24070
GeneTree:ENSGT00700000104060 OMA:VYKIVIL EMBL:AADN02076346
EMBL:AADN02076347 EMBL:AADN02076348 EMBL:AADN02076349
EMBL:AADN02076350 EMBL:AADN02076351 EMBL:AADN02076352
EMBL:AADN02076353 EMBL:AADN02076354 EMBL:AADN02076355
EMBL:AADN02076356 EMBL:AADN02076357 EMBL:AADN02076358
EMBL:AADN02076359 EMBL:AADN02076360 EMBL:AADN02076361
EMBL:AADN02076362 EMBL:AADN02076363 EMBL:AADN02076364
EMBL:AADN02076365 EMBL:AADN02076366 EMBL:AADN02076367
EMBL:AADN02076368 EMBL:AADN02076369 EMBL:AADN02076370
EMBL:AADN02076371 EMBL:AADN02076372 EMBL:AADN02076373
EMBL:AADN02076374 EMBL:AADN02076375 IPI:IPI00810723
ProteinModelPortal:E1C880 Ensembl:ENSGALT00000028294 Uniprot:E1C880
Length = 217
Score = 110 (43.8 bits), Expect = 0.00029, P = 0.00029
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 63 PAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRS 122
P ++V NK DL R VS+++ +LA ++ F E S + +D++ G++ +IR K S
Sbjct: 127 PLVVVGNKTDLEEFRQVSTEEGMSLARAYSCSFFETSAALRFYIDDVFHGLVREIRRKES 186
>UNIPROTKB|Q99578 [details] [associations]
symbol:RIT2 "GTP-binding protein Rit2" species:9606 "Homo
sapiens" [GO:0005516 "calmodulin binding" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007264 "small
GTPase mediated signal transduction" evidence=NAS;TAS] [GO:0003924
"GTPase activity" evidence=NAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
SMART:SM00173 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005634 Reactome:REACT_111102 GO:GO:0048011 GO:GO:0007264
GO:GO:0007268 GO:GO:0003924 EMBL:CH471088
Pathway_Interaction_DB:trkrpathway GO:GO:0005516 eggNOG:COG1100
Pathway_Interaction_DB:mapktrkpathway HOVERGEN:HBG009351
PANTHER:PTHR24070 HOGENOM:HOG000233973 OrthoDB:EOG4VDQ0C
EMBL:U71204 EMBL:Y07565 EMBL:U78164 EMBL:U78166 EMBL:AF493922
EMBL:AY563951 EMBL:AK313823 EMBL:BC018060 IPI:IPI00163763
IPI:IPI00289566 RefSeq:NP_001259006.1 RefSeq:NP_002921.1
UniGene:Hs.464985 ProteinModelPortal:Q99578 SMR:Q99578
IntAct:Q99578 STRING:Q99578 DMDM:38258639 PRIDE:Q99578 DNASU:6014
Ensembl:ENST00000282028 Ensembl:ENST00000326695 GeneID:6014
KEGG:hsa:6014 UCSC:uc002lav.3 UCSC:uc010dnf.3 CTD:6014
GeneCards:GC18M040323 H-InvDB:HIX0014415 HGNC:HGNC:10017 MIM:609592
neXtProt:NX_Q99578 PharmGKB:PA35527 InParanoid:Q99578 KO:K07833
OMA:VYKIVIL PhylomeDB:Q99578 GenomeRNAi:6014 NextBio:23463
Bgee:Q99578 CleanEx:HS_RIT2 Genevestigator:Q99578
GermOnline:ENSG00000152214 Uniprot:Q99578
Length = 217
Score = 110 (43.8 bits), Expect = 0.00029, P = 0.00029
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 63 PAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRS 122
P ++V NKIDL + R VS+++ +LA + F E S + +D+ G++ +IR K S
Sbjct: 127 PLVLVGNKIDLEQFRQVSTEEGLSLAQEYNCGFFETSAALRFCIDDAFHGLVREIRKKES 186
Query: 123 L 123
+
Sbjct: 187 M 187
>UNIPROTKB|Q5F3R8 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7
CTD:9230 KO:K07905 OMA:ERSAHDE EMBL:AADN02063526 EMBL:AJ851582
IPI:IPI00573563 RefSeq:NP_001012569.1 UniGene:Gga.1828 SMR:Q5F3R8
STRING:Q5F3R8 Ensembl:ENSGALT00000000866 GeneID:420063
KEGG:gga:420063 InParanoid:Q5F3R8 NextBio:20823028 Uniprot:Q5F3R8
Length = 218
Score = 110 (43.8 bits), Expect = 0.00029, P = 0.00029
Identities = 37/124 (29%), Positives = 60/124 (48%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGY 58
+S+Q ++A IW+ E+Y +TS+ G + ++Y + H ++V R +E
Sbjct: 51 RSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKE-- 108
Query: 59 LRTRP-----AIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGI 113
LR ++V NK DL RAV + +A+ A + FIE S NV+E I
Sbjct: 109 LRDHADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNI 168
Query: 114 LNQI 117
L +I
Sbjct: 169 LTEI 172
>UNIPROTKB|E2R5L5 [details] [associations]
symbol:RAB27B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071985 "multivesicular body sorting pathway"
evidence=IEA] [GO:0045921 "positive regulation of exocytosis"
evidence=IEA] [GO:0032585 "multivesicular body membrane"
evidence=IEA] [GO:0030140 "trans-Golgi network transport vesicle"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005795 "Golgi stack" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0003924 GO:GO:0005795 GO:GO:0032585
GO:GO:0030140 GO:GO:0045921 GO:GO:0071985
GeneTree:ENSGT00700000104288 CTD:5874 KO:K07886 OMA:QNVEKSV
EMBL:AAEX03000143 RefSeq:XP_541092.2 ProteinModelPortal:E2R5L5
Ensembl:ENSCAFT00000000237 GeneID:483974 KEGG:cfa:483974
NextBio:20858255 Uniprot:E2R5L5
Length = 218
Score = 110 (43.8 bits), Expect = 0.00029, P = 0.00029
Identities = 34/130 (26%), Positives = 64/130 (49%)
Query: 3 QSLQGHSGK---VRAIIWN----EQYEKLTSS---DETGLIIVWMLY-KPSYHRVEQDVI 51
Q G SGK V +W+ E++ LT++ D G ++++ L + S+ V +
Sbjct: 56 QGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMS 115
Query: 52 RLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLV 111
+L Y +++ NK DL R V+ + A++LA + + + E S NV++ +
Sbjct: 116 QLQANAYCENPDIVLIGNKADLPDQREVNERQARDLADKYGIPYFETSAATGQNVEKAVE 175
Query: 112 GILNQIRLKR 121
+L+ I +KR
Sbjct: 176 TLLDLI-MKR 184
>MGI|MGI:1931295 [details] [associations]
symbol:Rab27b "RAB27b, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005795 "Golgi stack" evidence=ISO] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016324 "apical plasma membrane" evidence=ISO] [GO:0017157
"regulation of exocytosis" evidence=ISO] [GO:0019003 "GDP binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030140 "trans-Golgi network transport vesicle"
evidence=ISO] [GO:0030667 "secretory granule membrane"
evidence=ISO] [GO:0032585 "multivesicular body membrane"
evidence=ISO] [GO:0042589 "zymogen granule membrane" evidence=ISO]
[GO:0045921 "positive regulation of exocytosis" evidence=ISO]
[GO:0071985 "multivesicular body sorting pathway" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1931295
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0016324 GO:GO:0003924 GO:GO:0005795
GO:GO:0032585 PROSITE:PS51419 GO:GO:0030140 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 GO:GO:0042589
GO:GO:0071985 PDB:2ZET PDBsum:2ZET HOGENOM:HOG000233968
GeneTree:ENSGT00700000104288 OrthoDB:EOG4PRSRM CTD:5874 KO:K07886
OMA:QNVEKSV EMBL:AF328893 EMBL:AY010898 EMBL:BC032928
IPI:IPI00120346 RefSeq:NP_001076022.1 RefSeq:NP_085031.3
UniGene:Mm.246753 PDB:2IEY PDB:2IEZ PDB:2IF0 PDBsum:2IEY
PDBsum:2IEZ PDBsum:2IF0 ProteinModelPortal:Q99P58 SMR:Q99P58
DIP:DIP-46237N STRING:Q99P58 PhosphoSite:Q99P58 PaxDb:Q99P58
PRIDE:Q99P58 Ensembl:ENSMUST00000069749 Ensembl:ENSMUST00000117692
Ensembl:ENSMUST00000121693 GeneID:80718 KEGG:mmu:80718
InParanoid:Q99P58 ChiTaRS:RAB27B EvolutionaryTrace:Q99P58
NextBio:350069 Bgee:Q99P58 CleanEx:MM_RAB27B Genevestigator:Q99P58
GermOnline:ENSMUSG00000024511 Uniprot:Q99P58
Length = 218
Score = 110 (43.8 bits), Expect = 0.00029, P = 0.00029
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 3 QSLQGHSGK---VRAIIWN----EQYEKLTSS---DETGLIIVWMLY-KPSYHRVEQDVI 51
Q G SGK V +W+ E++ LT++ D G ++++ L + S+ V +
Sbjct: 56 QGADGASGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMS 115
Query: 52 RLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLV 111
+L Y +++ NK DL R V+ + A+ LA + + + E S NV++ +
Sbjct: 116 QLQANAYCENPDIVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVE 175
Query: 112 GILNQIRLKR 121
+L+ I +KR
Sbjct: 176 TLLDLI-MKR 184
>ZFIN|ZDB-GENE-040426-2860 [details] [associations]
symbol:rab11ba "RAB11B, member RAS oncogene
family, a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040426-2860
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HSSP:P35278 KO:K07905 EMBL:BC048889
IPI:IPI00509689 RefSeq:NP_999935.1 UniGene:Dr.76644
ProteinModelPortal:Q802D1 SMR:Q802D1 STRING:Q802D1 PRIDE:Q802D1
GeneID:406798 KEGG:dre:406798 CTD:406798 InParanoid:Q802D1
NextBio:20818308 ArrayExpress:Q802D1 Bgee:Q802D1 Uniprot:Q802D1
Length = 218
Score = 110 (43.8 bits), Expect = 0.00029, P = 0.00029
Identities = 37/124 (29%), Positives = 60/124 (48%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGY 58
+S+Q ++A IW+ E+Y +TS+ G + ++Y + H ++V R +E
Sbjct: 51 RSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKE-- 108
Query: 59 LRTRP-----AIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGI 113
LR ++V NK DL RAV + +A+ A + FIE S NV+E I
Sbjct: 109 LRDHADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNI 168
Query: 114 LNQI 117
L +I
Sbjct: 169 LTEI 172
>ZFIN|ZDB-GENE-040718-293 [details] [associations]
symbol:rab11bb "RAB11B, member RAS oncogene family,
b" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040718-293
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 GeneTree:ENSGT00690000101664 KO:K07905
OMA:ERSAHDE EMBL:AL929146 EMBL:CU469531 EMBL:BC076247
IPI:IPI00489756 RefSeq:NP_001002555.1 RefSeq:XP_003198017.1
RefSeq:XP_003198018.1 UniGene:Dr.84381 SMR:Q6DGU2 STRING:Q6DGU2
Ensembl:ENSDART00000036452 Ensembl:ENSDART00000123392
GeneID:100536606 GeneID:436828 KEGG:dre:100536606 KEGG:dre:436828
CTD:436828 InParanoid:Q6DGU2 NextBio:20831260 Uniprot:Q6DGU2
Length = 218
Score = 110 (43.8 bits), Expect = 0.00029, P = 0.00029
Identities = 37/124 (29%), Positives = 60/124 (48%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGY 58
+S+Q ++A IW+ E+Y +TS+ G + ++Y + H ++V R +E
Sbjct: 51 RSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKE-- 108
Query: 59 LRTRP-----AIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGI 113
LR ++V NK DL RAV + +A+ A + FIE S NV+E I
Sbjct: 109 LRDHADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNI 168
Query: 114 LNQI 117
L +I
Sbjct: 169 LTEI 172
>SGD|S000000833 [details] [associations]
symbol:YPT31 "Rab family GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0005794 "Golgi apparatus" evidence=IEA;IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISS;IDA;IPI] [GO:0005768
"endosome" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0034498 "early
endosome to Golgi transport" evidence=IGI] [GO:0006887 "exocytosis"
evidence=IMP] [GO:0005741 "mitochondrial outer membrane"
evidence=IDA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IGI;IMP] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
SGD:S000000833 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0000139 GO:GO:0005741 GO:GO:0015031
GO:GO:0005768 GO:GO:0003924 EMBL:BK006939 GO:GO:0006887 EMBL:U18778
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0034498 PDB:3CPJ PDBsum:3CPJ
KO:K07976 HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664
OMA:ERSAHDE EMBL:L17070 EMBL:X72833 PIR:S42679 RefSeq:NP_010948.1
ProteinModelPortal:P38555 SMR:P38555 DIP:DIP-2022N IntAct:P38555
MINT:MINT-386034 STRING:P38555 PaxDb:P38555 PeptideAtlas:P38555
PRIDE:P38555 EnsemblFungi:YER031C GeneID:856753 KEGG:sce:YER031C
OrthoDB:EOG41K2ND EvolutionaryTrace:P38555 NextBio:982908
Genevestigator:P38555 GermOnline:YER031C Uniprot:P38555
Length = 223
Score = 110 (43.8 bits), Expect = 0.00031, P = 0.00031
Identities = 40/144 (27%), Positives = 67/144 (46%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSS---DETGLIIVWMLYKPS-YHRVEQDVIRLH 54
++L+ +++A IW+ E+Y +TS+ G +IV+ + K S Y + L
Sbjct: 53 RTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELR 112
Query: 55 EEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGIL 114
E +I NK DLA RAV ++++K A ++ F E S NVD+ ++
Sbjct: 113 ENADDNVAVGLI-GNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELI 171
Query: 115 NQIRLKRSLVQTGGAQAAAPWKSN 138
N I K S Q ++A +N
Sbjct: 172 NTIYQKVSKHQMDLGDSSANGNAN 195
>TAIR|locus:2152753 [details] [associations]
symbol:RABA4C "RAB GTPase homolog A4C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968
HSSP:P20339 EMBL:AF218121 EMBL:AB024025 EMBL:BT024842
IPI:IPI00524205 RefSeq:NP_199607.1 UniGene:At.49142
ProteinModelPortal:Q9FE79 SMR:Q9FE79 STRING:Q9FE79 PaxDb:Q9FE79
PRIDE:Q9FE79 EnsemblPlants:AT5G47960.1 GeneID:834847
KEGG:ath:AT5G47960 TAIR:At5g47960 InParanoid:Q9FE79 OMA:QSFDHVA
PhylomeDB:Q9FE79 ProtClustDB:CLSN2916334 Genevestigator:Q9FE79
Uniprot:Q9FE79
Length = 223
Score = 110 (43.8 bits), Expect = 0.00031, P = 0.00031
Identities = 39/148 (26%), Positives = 75/148 (50%)
Query: 12 VRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEE--GYLRTRPAI 65
++A IW+ E+Y +TS+ G + ++Y + + V R EE G+ I
Sbjct: 64 IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVI 123
Query: 66 -IVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQI-RL--KR 121
++ NK DL RAV ++DAK A + F+E S +NV+ + +L +I R+ K+
Sbjct: 124 MLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKK 183
Query: 122 SLVQTGGAQAAAPWKSNTTLVRASAVIV 149
+LV ++ +++L++ + ++V
Sbjct: 184 NLVANEEGESGG----DSSLLQGTKIVV 207
>UNIPROTKB|H9L0N4 [details] [associations]
symbol:RIT1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
SMART:SM00173 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0016020 GO:GO:0003924 PANTHER:PTHR24070
GeneTree:ENSGT00700000104060 OMA:MERWLFL EMBL:AADN02015898
EMBL:AADN02015897 Ensembl:ENSGALT00000023608 Uniprot:H9L0N4
Length = 224
Score = 110 (43.8 bits), Expect = 0.00032, P = 0.00032
Identities = 30/120 (25%), Positives = 55/120 (45%)
Query: 2 NQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLY-KPSYHRVEQDVIRLHEEGYLR 60
N + +G+ +QY + + E G II + + + S+H V + ++
Sbjct: 75 NLDILDTAGQAEFTAMRDQYMR---AGE-GFIICYSITDRRSFHEVREFKQLIYRVRRTD 130
Query: 61 TRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLK 120
P ++V NK DL + R VS ++ LA F F E S + +D++ ++ +IR K
Sbjct: 131 DTPVVLVGNKSDLTQLRQVSKEEGSALAREFNCPFFETSAAYRYYIDDVFHALVREIRRK 190
>UNIPROTKB|E1C524 [details] [associations]
symbol:RALA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0017157 "regulation of
exocytosis" evidence=IEA] [GO:0030139 "endocytic vesicle"
evidence=IEA] [GO:0031532 "actin cytoskeleton reorganization"
evidence=IEA] [GO:0031755 "Edg-2 lysophosphatidic acid receptor
binding" evidence=IEA] [GO:0032154 "cleavage furrow" evidence=IEA]
[GO:0051491 "positive regulation of filopodium assembly"
evidence=IEA] [GO:0051665 "membrane raft localization"
evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
SMART:SM00173 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0009986 GO:GO:0003924 GO:GO:0000910
GO:GO:0031532 GO:GO:0030139 GO:GO:0051491 GO:GO:0032154
PANTHER:PTHR24070 CTD:5898 GeneTree:ENSGT00700000104315 KO:K07834
OMA:SKATSGR EMBL:AADN02001421 IPI:IPI00584318 RefSeq:XP_418863.1
UniGene:Gga.2712 Ensembl:ENSGALT00000020118 GeneID:420765
KEGG:gga:420765 NextBio:20823635 Uniprot:E1C524
Length = 206
Score = 109 (43.4 bits), Expect = 0.00033, P = 0.00033
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 48 QDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVD 107
+ ++R+ E+ + P ++V NK DL R VS ++AKN A + V ++E S NVD
Sbjct: 109 EQILRVKEDENV---PFLLVGNKSDLEDKRQVSIEEAKNRADQWNVNYVETSAKTRANVD 165
Query: 108 ELLVGILNQIRLKR 121
++ ++ +IR ++
Sbjct: 166 KVFFDLMREIRARK 179
>UNIPROTKB|P63320 [details] [associations]
symbol:RALA "Ras-related protein Ral-A" species:9490
"Saguinus oedipus" [GO:0000910 "cytokinesis" evidence=ISS]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=ISS] [GO:0017157 "regulation of exocytosis"
evidence=ISS] [GO:0031755 "Edg-2 lysophosphatidic acid receptor
binding" evidence=ISS] [GO:0032154 "cleavage furrow" evidence=ISS]
[GO:0051665 "membrane raft localization" evidence=ISS]
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR020849
Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421 SMART:SM00173
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0009986 GO:GO:0003924 GO:GO:0007049 GO:GO:0000910
GO:GO:0006887 GO:GO:0030496 GO:GO:0032154 GO:GO:0031755
HOVERGEN:HBG009351 GO:GO:0017157 PANTHER:PTHR24070 GO:GO:0051665
EMBL:X04328 PDB:1U8Y PDB:1U8Z PDB:1U90 PDBsum:1U8Y PDBsum:1U8Z
PDBsum:1U90 ProteinModelPortal:P63320 SMR:P63320 PRIDE:P63320
EvolutionaryTrace:P63320 Uniprot:P63320
Length = 206
Score = 109 (43.4 bits), Expect = 0.00033, P = 0.00033
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 48 QDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVD 107
+ ++R+ E+ + P ++V NK DL R VS ++AKN A + V ++E S NVD
Sbjct: 109 EQILRVKEDENV---PFLLVGNKSDLEDKRQVSVEEAKNRADQWNVNYVETSAKTRANVD 165
Query: 108 ELLVGILNQIRLKR 121
++ ++ +IR ++
Sbjct: 166 KVFFDLMREIRARK 179
>MGI|MGI:1927243 [details] [associations]
symbol:Rala "v-ral simian leukemia viral oncogene homolog A
(ras related)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0006887 "exocytosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0009986 "cell
surface" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=ISO;IDA]
[GO:0031532 "actin cytoskeleton reorganization" evidence=ISO]
[GO:0031755 "Edg-2 lysophosphatidic acid receptor binding"
evidence=ISO] [GO:0032154 "cleavage furrow" evidence=ISO]
[GO:0051301 "cell division" evidence=IEA] [GO:0051491 "positive
regulation of filopodium assembly" evidence=ISO] [GO:0051665
"membrane raft localization" evidence=ISO;IDA] Reactome:REACT_88307
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR020849
Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421 SMART:SM00173
MGI:MGI:1927243 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
Reactome:REACT_147847 GO:GO:0007264 GO:GO:0009986 GO:GO:0003924
GO:GO:0007049 GO:GO:0000910 GO:GO:0031532 GO:GO:0030139
GO:GO:0006887 GO:GO:0051491 GO:GO:0030496 GO:GO:0032154
eggNOG:COG1100 GO:GO:0031755 HOVERGEN:HBG009351 GO:GO:0017157
PANTHER:PTHR24070 HOGENOM:HOG000233973 CTD:5898
GeneTree:ENSGT00700000104315 KO:K07834 OMA:SKATSGR
OrthoDB:EOG4HX524 ChiTaRS:Rala GO:GO:0051665 EMBL:Z48587
EMBL:AF244951 EMBL:BC031741 IPI:IPI00124282 RefSeq:NP_062364.3
UniGene:Mm.27348 ProteinModelPortal:P63321 SMR:P63321 IntAct:P63321
STRING:P63321 PhosphoSite:P63321 PaxDb:P63321 PRIDE:P63321
Ensembl:ENSMUST00000009003 GeneID:56044 KEGG:mmu:56044
InParanoid:P63321 NextBio:311812 Bgee:P63321 Genevestigator:P63321
GermOnline:ENSMUSG00000008859 Uniprot:P63321
Length = 206
Score = 109 (43.4 bits), Expect = 0.00033, P = 0.00033
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 48 QDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVD 107
+ ++R+ E+ + P ++V NK DL R VS ++AKN A + V ++E S NVD
Sbjct: 109 EQILRVKEDENV---PFLLVGNKSDLEDKRQVSVEEAKNRADQWNVNYVETSAKTRANVD 165
Query: 108 ELLVGILNQIRLKR 121
++ ++ +IR ++
Sbjct: 166 KVFFDLMREIRARK 179
>RGD|619851 [details] [associations]
symbol:Rala "v-ral simian leukemia viral oncogene homolog A (ras
related)" species:10116 "Rattus norvegicus" [GO:0000910
"cytokinesis" evidence=ISO;ISS] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=NAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO;ISS] [GO:0006887 "exocytosis" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0009986 "cell
surface" evidence=IEA;ISO] [GO:0017157 "regulation of exocytosis"
evidence=ISO;ISS] [GO:0030139 "endocytic vesicle" evidence=IEA;ISO]
[GO:0030496 "midbody" evidence=IEA] [GO:0031532 "actin cytoskeleton
reorganization" evidence=IEA;ISO] [GO:0031755 "Edg-2
lysophosphatidic acid receptor binding" evidence=ISO;ISS]
[GO:0032154 "cleavage furrow" evidence=ISO;ISS] [GO:0051491
"positive regulation of filopodium assembly" evidence=IEA;ISO]
[GO:0051665 "membrane raft localization" evidence=ISO;ISS]
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR020849
Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421 SMART:SM00173
RGD:619851 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 Reactome:REACT_111984 GO:GO:0007264 GO:GO:0009986
GO:GO:0003924 GO:GO:0007049 GO:GO:0000910 GO:GO:0031532
GO:GO:0030139 GO:GO:0006887 GO:GO:0051491 GO:GO:0030496
GO:GO:0032154 eggNOG:COG1100 GO:GO:0031755 HOVERGEN:HBG009351
GO:GO:0017157 PANTHER:PTHR24070 HOGENOM:HOG000233973 CTD:5898
GeneTree:ENSGT00700000104315 KO:K07834 OMA:SKATSGR
OrthoDB:EOG4HX524 GO:GO:0051665 EMBL:L19698 IPI:IPI00203575
PIR:JN0622 RefSeq:NP_112355.1 UniGene:Rn.100380
ProteinModelPortal:P63322 SMR:P63322 IntAct:P63322 STRING:P63322
PhosphoSite:P63322 PRIDE:P63322 Ensembl:ENSRNOT00000018190
GeneID:81757 KEGG:rno:81757 UCSC:RGD:619851 InParanoid:P63322
NextBio:615530 Genevestigator:P63322 GermOnline:ENSRNOG00000013454
Uniprot:P63322
Length = 206
Score = 109 (43.4 bits), Expect = 0.00033, P = 0.00033
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 48 QDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVD 107
+ ++R+ E+ + P ++V NK DL R VS ++AKN A + V ++E S NVD
Sbjct: 109 EQILRVKEDENV---PFLLVGNKSDLEDKRQVSVEEAKNRADQWNVNYVETSAKTRANVD 165
Query: 108 ELLVGILNQIRLKR 121
++ ++ +IR ++
Sbjct: 166 KVFFDLMREIRARK 179
>UNIPROTKB|F1PXB8 [details] [associations]
symbol:RAP2C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0061097 "regulation of protein tyrosine
kinase activity" evidence=IEA] [GO:0055038 "recycling endosome
membrane" evidence=IEA] [GO:0032486 "Rap protein signal
transduction" evidence=IEA] [GO:0031954 "positive regulation of
protein autophosphorylation" evidence=IEA] [GO:0030336 "negative
regulation of cell migration" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] InterPro:IPR001806
InterPro:IPR005225 InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449
PROSITE:PS51421 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0003924 GO:GO:0030336 GO:GO:0055038 PANTHER:PTHR24070
GeneTree:ENSGT00700000104149 GO:GO:0031954 GO:GO:0032486
GO:GO:0061097 EMBL:AAEX03026922 Ensembl:ENSCAFT00000036743
Uniprot:F1PXB8
Length = 117
Score = 93 (37.8 bits), Expect = 0.00034, P = 0.00034
Identities = 28/91 (30%), Positives = 46/91 (50%)
Query: 31 GLIIVWMLY-KPSYHRVE---QDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKN 86
G I+V+ L + S+ ++ ++R+ Y + P I+V NK+DL R V S + +
Sbjct: 11 GFILVYSLVNQQSFQDIKPMRDQIVRVKR--YEKV-PLILVGNKVDLEPEREVMSSEGRA 67
Query: 87 LAASFKVKFIEVSVGIHHNVDELLVGILNQI 117
LA + F+E S VDEL I+ Q+
Sbjct: 68 LAQEWGCPFMETSAKSKSMVDELFAEIVRQM 98
>ZFIN|ZDB-GENE-041010-217 [details] [associations]
symbol:rras "related RAS viral (r-ras) oncogene
homolog" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IMP]
[GO:0045199 "maintenance of epithelial cell apical/basal polarity"
evidence=IMP] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
SMART:SM00173 ZFIN:ZDB-GENE-041010-217 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020 GO:GO:0003924
GO:GO:0007219 GO:GO:0045199 eggNOG:COG1100 HOVERGEN:HBG009351
PANTHER:PTHR24070 HOGENOM:HOG000233973 GeneTree:ENSGT00700000104315
KO:K07830 OrthoDB:EOG4P5KB6 CTD:6237 OMA:FGASHHV EMBL:CR936975
EMBL:BC096943 IPI:IPI00613126 RefSeq:NP_001005931.2
UniGene:Dr.76729 SMR:Q4V9D8 STRING:Q4V9D8
Ensembl:ENSDART00000025496 GeneID:449660 KEGG:dre:449660
InParanoid:Q4V9D8 NextBio:20832761 Uniprot:Q4V9D8
Length = 196
Score = 108 (43.1 bits), Expect = 0.00035, P = 0.00035
Identities = 30/104 (28%), Positives = 55/104 (52%)
Query: 19 EQYEKLTSSDETGLIIVWMLYKP-SYHRVEQ---DVIRLHEEGYLRTRPAIIVANKIDLA 74
EQY + S E G ++V+ L SY+ +++ ++R+ + P ++V NK DL
Sbjct: 72 EQYMR---SGE-GFLLVFALNDSGSYNEIQKFHTQILRVKDRDDF---PMVLVGNKSDLD 124
Query: 75 RARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIR 118
+ R +S ++A A ++ ++E S HNVDE + ++ IR
Sbjct: 125 QQRVISKEEAMTFARENRIHYMESSAKNRHNVDEAFMEVVRAIR 168
>RGD|1562478 [details] [associations]
symbol:Rab17 "RAB17, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=ISO] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0019003 "GDP binding" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1562478 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 OMA:KLLFMET
GeneTree:ENSGT00640000091139 IPI:IPI00767844
Ensembl:ENSRNOT00000026918 UCSC:RGD:1562478 Uniprot:F1M7S7
Length = 185
Score = 107 (42.7 bits), Expect = 0.00036, P = 0.00036
Identities = 29/117 (24%), Positives = 59/117 (50%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
L++ + K S+H+ +Q + L +E + ++V NK DL R V+ Q+ K A S
Sbjct: 67 LLVYDITRKDSFHKAQQWLEDLEKEFHPGEVVVMLVGNKTDLGEEREVTFQEGKEFAESK 126
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQAAAPWKSNTTLVRASAVI 148
+ F+E S +++ V E+ I ++ L+R+ G Q+++P + ++ +
Sbjct: 127 SLLFMESSAKLNYQVSEIFNTIAQEL-LQRA----GDGQSSSPQEGEAVVLNQGPTV 178
>UNIPROTKB|E2RK40 [details] [associations]
symbol:DIRAS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
SMART:SM00173 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0016020 GO:GO:0003924 PANTHER:PTHR24070
GeneTree:ENSGT00700000104149 CTD:54769 KO:K07841 OMA:RQVISCN
EMBL:AAEX03000636 RefSeq:XP_003432700.1 ProteinModelPortal:E2RK40
Ensembl:ENSCAFT00000003414 GeneID:484197 KEGG:cfa:484197
NextBio:20858409 Uniprot:E2RK40
Length = 199
Score = 108 (43.1 bits), Expect = 0.00038, P = 0.00038
Identities = 31/112 (27%), Positives = 60/112 (53%)
Query: 22 EKLTSSDETGLIIVWMLY-KPSYHRVEQDVIRLHE-EGYLRTRPAIIVANKIDLARARAV 79
++L+ S I+V+ + + S ++ ++ E +G + + P ++V NK D + R V
Sbjct: 72 QRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPNREV 131
Query: 80 SSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQA 131
S +A+ LA +K F+E S ++HNV EL +LN + + +Q G ++
Sbjct: 132 ESGEAEALARKWKCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQIDGKKS 183
>UNIPROTKB|O00194 [details] [associations]
symbol:RAB27B "Ras-related protein Rab-27B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016324 "apical plasma membrane" evidence=IEA]
[GO:0042589 "zymogen granule membrane" evidence=IEA] [GO:0003924
"GTPase activity" evidence=ISS] [GO:0045921 "positive regulation of
exocytosis" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0030140 "trans-Golgi network transport vesicle" evidence=IDA]
[GO:0032585 "multivesicular body membrane" evidence=IDA]
[GO:0071985 "multivesicular body sorting pathway" evidence=IMP]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0019003 "GDP binding"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0016324 GO:GO:0003924 GO:GO:0005795 GO:GO:0032585
PROSITE:PS51419 GO:GO:0030140 eggNOG:COG1100 GO:GO:0019003
EMBL:CH471096 GO:GO:0045921 HOVERGEN:HBG009351 GO:GO:0042589
GO:GO:0071985 HOGENOM:HOG000233968 OrthoDB:EOG4PRSRM CTD:5874
KO:K07886 OMA:QNVEKSV EMBL:U57093 EMBL:AF329499 EMBL:AF498954
EMBL:AK314115 EMBL:BC027474 IPI:IPI00010491 RefSeq:NP_004154.2
UniGene:Hs.25318 PDB:2F7S PDBsum:2F7S ProteinModelPortal:O00194
SMR:O00194 DIP:DIP-48948N STRING:O00194 PhosphoSite:O00194
OGP:O00194 PaxDb:O00194 PRIDE:O00194 DNASU:5874
Ensembl:ENST00000262094 GeneID:5874 KEGG:hsa:5874 UCSC:uc002lfr.3
GeneCards:GC18P052495 HGNC:HGNC:9767 HPA:CAB017712 HPA:HPA019849
MIM:603869 neXtProt:NX_O00194 PharmGKB:PA34118 InParanoid:O00194
PhylomeDB:O00194 EvolutionaryTrace:O00194 GenomeRNAi:5874
NextBio:22822 Bgee:O00194 CleanEx:HS_RAB27B Genevestigator:O00194
GermOnline:ENSG00000041353 Uniprot:O00194
Length = 218
Score = 109 (43.4 bits), Expect = 0.00039, P = 0.00039
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 3 QSLQGHSGK---VRAIIWN----EQYEKLTSS---DETGLIIVWMLY-KPSYHRVEQDVI 51
Q G SGK V +W+ E++ LT++ D G ++++ L + S+ V +
Sbjct: 56 QGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMS 115
Query: 52 RLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLV 111
+L Y +++ NK DL R V+ + A+ LA + + + E S NV++ +
Sbjct: 116 QLQANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVE 175
Query: 112 GILNQIRLKR 121
+L+ I +KR
Sbjct: 176 TLLDLI-MKR 184
>POMBASE|SPAC17H9.09c [details] [associations]
symbol:ras1 "GTPase Ras1" species:4896
"Schizosaccharomyces pombe" [GO:0000747 "conjugation with cellular
fusion" evidence=IMP] [GO:0000750 "pheromone-dependent signal
transduction involved in conjugation with cellular fusion"
evidence=IMP] [GO:0000751 "cell cycle arrest in response to
pheromone" evidence=TAS] [GO:0002134 "UTP binding" evidence=IDA]
[GO:0002135 "CTP binding" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0005525 "GTP binding" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0006995
"cellular response to nitrogen starvation" evidence=IGI]
[GO:0007051 "spindle organization" evidence=IGI] [GO:0007329
"positive regulation of transcription from RNA polymerase II
promoter by pheromones" evidence=IMP] [GO:0009272 "fungal-type cell
wall biogenesis" evidence=IMP] [GO:0019003 "GDP binding"
evidence=IDA] [GO:0030437 "ascospore formation" evidence=TAS]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IMP] [GO:0032005 "signal transduction involved in
conjugation with cellular fusion" evidence=IMP] [GO:0032488 "Cdc42
protein signal transduction" evidence=IC] [GO:0033205 "cell cycle
cytokinesis" evidence=IGI] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0071521 "Cdc42 GTPase
complex" evidence=TAS] [GO:0071963 "establishment or maintenance of
cell polarity regulating cell shape" evidence=TAS] [GO:0090028
"positive regulation of pheromone-dependent signal transduction
involved in conjugation with cellular fusion" evidence=IMP]
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR020849
Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421 SMART:SM00173
PomBase:SPAC17H9.09c GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 EMBL:CU329670 GO:GO:0043161
GenomeReviews:CU329670_GR GO:GO:0003924 GO:GO:0032488 GO:GO:0071963
GO:GO:0009272 GO:GO:0000750 GO:GO:0033205 GO:GO:0030437
GO:GO:0006995 eggNOG:COG1100 GO:GO:0007051 GO:GO:0000751
GO:GO:0071521 KO:K07974 PANTHER:PTHR24070 GO:GO:0007329
HOGENOM:HOG000233973 GO:GO:0090028 OMA:IDDETCL OrthoDB:EOG4578H0
EMBL:X02331 EMBL:X03771 PIR:A22715 PIR:T37875 PIR:T45545
RefSeq:NP_593579.1 ProteinModelPortal:P08647 SMR:P08647
STRING:P08647 EnsemblFungi:SPAC17H9.09c.1 GeneID:2542285
KEGG:spo:SPAC17H9.09c NextBio:20803348 Uniprot:P08647
Length = 219
Score = 109 (43.4 bits), Expect = 0.00040, P = 0.00040
Identities = 37/135 (27%), Positives = 63/135 (46%)
Query: 19 EQYEKLTSSDETGLIIVWMLYKPSYHRVE---QDVIRLHEEGYLRTRPAIIVANKIDLAR 75
EQY + + E L++ + + S+ + Q ++R+ ++ T P ++VANK DL
Sbjct: 74 EQYMR---TGEGFLLVYNITSRSSFDEISTFYQQILRVKDKD---TFPVVLVANKCDLEA 127
Query: 76 ARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKRSLVQTGGAQAAAPW 135
R VS + + LA S ++E S + NV+E ++ IR + G A
Sbjct: 128 ERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIRRYNKSEEKGFQNKQAVQ 187
Query: 136 KSN---TTLVRASAV 147
+ +T RASAV
Sbjct: 188 TAQVPASTAKRASAV 202
>ZFIN|ZDB-GENE-040625-121 [details] [associations]
symbol:ralbb "v-ral simian leukemia viral oncogene
homolog Bb (ras related)" species:7955 "Danio rerio" [GO:0005525
"GTP binding" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR020849
Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421 SMART:SM00173
ZFIN:ZDB-GENE-040625-121 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0016020 GO:GO:0003924 GO:GO:0001525
HOVERGEN:HBG009351 HSSP:P01112 PANTHER:PTHR24070 EMBL:BC071460
IPI:IPI00484105 RefSeq:NP_001002123.1 UniGene:Dr.35859
ProteinModelPortal:Q6IQE6 SMR:Q6IQE6 PRIDE:Q6IQE6 GeneID:415213
KEGG:dre:415213 CTD:415213 InParanoid:Q6IQE6 NextBio:20818881
Bgee:Q6IQE6 Uniprot:Q6IQE6
Length = 206
Score = 108 (43.1 bits), Expect = 0.00043, P = 0.00043
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 31 GLIIVWMLYKP-SYH---RVEQDVIRLH-EEGYLRTRPAIIVANKIDLARARAVSSQDAK 85
G ++V+ + +P S+ + ++R+ EE + P ++V NK DL R VS+ +A+
Sbjct: 88 GFLLVFSITEPESFSASAEFREQILRVKAEEDKI---PLLVVGNKSDLEERRQVSADEAR 144
Query: 86 NLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLKR 121
+ A + V+++E S NVD++ ++ ++R K+
Sbjct: 145 SKADEWGVQYVETSAKTRANVDKVFFDLMREVRTKK 180
>UNIPROTKB|J9NZ45 [details] [associations]
symbol:RAP2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
SMART:SM00173 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0016020 GO:GO:0003924 PANTHER:PTHR24070
GeneTree:ENSGT00700000104149 KO:K07838 CTD:5912 EMBL:AAEX03013693
RefSeq:XP_854638.1 Ensembl:ENSCAFT00000049624 GeneID:611828
KEGG:cfa:611828 Uniprot:J9NZ45
Length = 148
Score = 101 (40.6 bits), Expect = 0.00049, P = 0.00049
Identities = 33/103 (32%), Positives = 50/103 (48%)
Query: 19 EQYEKLTSSDETGLIIVWMLY-KPSYHRVE---QDVIRLHEEGYLRTRPAIIVANKIDLA 74
E L + G I+V+ L + S+ ++ +IR+ Y R P I+V NK+DL
Sbjct: 30 ESMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKR--YERV-PMILVGNKVDLE 86
Query: 75 RARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQI 117
R VS + K LA + F+E S +VDEL I+ Q+
Sbjct: 87 GEREVSYGEGKALAEEWSCPFMETSAKNKASVDELFAEIVRQM 129
>TAIR|locus:2015576 [details] [associations]
symbol:RABA1b "RAB GTPase homolog A1B" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS;IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=NAS] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=TAS] [GO:0005773
"vacuole" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005774 GO:GO:0006886
GO:GO:0007264 PROSITE:PS51419 EMBL:AC051629 GO:GO:0042538
eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968 EMBL:L18883
EMBL:BT006406 EMBL:AK227865 EMBL:AY086881 IPI:IPI00537039
PIR:S59942 RefSeq:NP_173136.1 UniGene:At.324
ProteinModelPortal:Q39222 SMR:Q39222 STRING:Q39222 PaxDb:Q39222
PRIDE:Q39222 EnsemblPlants:AT1G16920.1 GeneID:838263
KEGG:ath:AT1G16920 TAIR:At1g16920 InParanoid:Q39222 OMA:QIYRITS
PhylomeDB:Q39222 ProtClustDB:CLSN2914413 Genevestigator:Q39222
GermOnline:AT1G16920 Uniprot:Q39222
Length = 216
Score = 108 (43.1 bits), Expect = 0.00050, P = 0.00050
Identities = 41/136 (30%), Positives = 66/136 (48%)
Query: 10 GKV-RAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPA 64
GKV +A IW+ E+Y +TS+ G + ++Y + ++V R +E T P
Sbjct: 59 GKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPN 118
Query: 65 IIV---ANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQI-RL- 119
I+V NK DL AV ++D K+ A + F+E S NV++ +L QI R+
Sbjct: 119 IVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRIT 178
Query: 120 KRSLVQTG-GAQAAAP 134
+ V+ G A+ P
Sbjct: 179 SKKQVEAGEDGNASVP 194
>UNIPROTKB|F1MX39 [details] [associations]
symbol:RAB42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00690000101664 CTD:115273 KO:K07929
EMBL:DAAA02006334 IPI:IPI00706837 RefSeq:XP_002685729.1
RefSeq:XP_592115.2 UniGene:Bt.87211 ProteinModelPortal:F1MX39
Ensembl:ENSBTAT00000028686 GeneID:514286 KEGG:bta:514286
OMA:RFRCITR NextBio:20871263 Uniprot:F1MX39
Length = 220
Score = 108 (43.1 bits), Expect = 0.00053, P = 0.00053
Identities = 38/142 (26%), Positives = 74/142 (52%)
Query: 3 QSLQGHSG-KVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEEG 57
+++Q +G +V+ +W+ E++ +T S ++ V +++ + + + ++ H+E
Sbjct: 56 RTVQLQAGPRVKLQLWDTAGQERFRCITRSFYRNVVGVLLVFDVTNRKSFEHILDWHQEV 115
Query: 58 YLRTRP--AI--IVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGI 113
P AI ++ +K DL AR VS+Q+A+ LAAS + F+E S + NVD +
Sbjct: 116 MATQGPDKAIFLLIGHKSDLQSARCVSTQEAEELAASLGIGFMETSAKSNCNVDLAFDTL 175
Query: 114 LNQIRLKRSLVQTGGAQAAAPW 135
N I+ ++L Q G + W
Sbjct: 176 ANTIQ--QALWQ-GAIKLEEDW 194
>WB|WBGene00004266 [details] [associations]
symbol:rab-1 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0006915
GO:GO:0007264 GO:GO:0002119 GO:GO:0015031 GO:GO:0018996
GO:GO:0040011 GO:GO:0048477 HOGENOM:HOG000233968 HSSP:P07560
GeneTree:ENSGT00700000104049 KO:K07874 OMA:NRVGPPS EMBL:FO080829
PIR:T33781 RefSeq:NP_503397.1 ProteinModelPortal:Q9UAQ6 SMR:Q9UAQ6
DIP:DIP-24638N IntAct:Q9UAQ6 MINT:MINT-1101433 STRING:Q9UAQ6
EnsemblMetazoa:C39F7.4.1 EnsemblMetazoa:C39F7.4.2 GeneID:178620
KEGG:cel:CELE_C39F7.4 UCSC:C39F7.4.1 CTD:178620 WormBase:C39F7.4
InParanoid:Q9UAQ6 NextBio:901876 ArrayExpress:Q9UAQ6 Uniprot:Q9UAQ6
Length = 205
Score = 107 (42.7 bits), Expect = 0.00055, P = 0.00055
Identities = 35/130 (26%), Positives = 67/130 (51%)
Query: 10 GK-VRAIIWN----EQYEKLTSS---DETGLIIVWMLY-KPSYHRVEQDVIRLHEEGYLR 60
GK ++ IW+ E++ +TSS G+I+V+ + + +++ V+Q + +
Sbjct: 57 GKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACEN 116
Query: 61 TRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLK 120
++V NK DL RAV +Q A++ A + F+E S NV++ + + ++I+ +
Sbjct: 117 VNK-LLVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSR 175
Query: 121 RSLVQ-TGGA 129
VQ GGA
Sbjct: 176 MGPVQGAGGA 185
>UNIPROTKB|B4DMK0 [details] [associations]
symbol:RAB11B "cDNA FLJ61134, highly similar to Ras-related
protein Rab-11B" species:9606 "Homo sapiens" [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HOGENOM:HOG000233968 UniGene:Hs.626404
EMBL:AK297498 IPI:IPI01022454 ProteinModelPortal:B4DMK0 SMR:B4DMK0
STRING:B4DMK0 PRIDE:B4DMK0 Uniprot:B4DMK0
Length = 179
Score = 105 (42.0 bits), Expect = 0.00057, P = 0.00057
Identities = 35/119 (29%), Positives = 58/119 (48%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIRLHEE-- 56
+S+Q ++A IW+ E+Y +TS+ G + ++Y + H ++V R +E
Sbjct: 51 RSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR 110
Query: 57 GYLRTRPAI-IVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGIL 114
+ + I +V NK DL RAV + +A+ A + FIE S NV+E IL
Sbjct: 111 DHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNIL 169
>UNIPROTKB|Q92930 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0030911 "TPR domain
binding" evidence=IEA] [GO:0031346 "positive regulation of cell
projection organization" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0051286 "cell tip"
evidence=IEA] [GO:0051461 "positive regulation of corticotropin
secretion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0015031 "protein transport" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0034332 "adherens junction
organization" evidence=ISS] [GO:0005102 "receptor binding"
evidence=IPI] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0045046 "protein import into peroxisome membrane" evidence=IDA]
[GO:0005778 "peroxisomal membrane" evidence=IDA] [GO:0019003 "GDP
binding" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=NAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0048471 GO:GO:0007264 GO:GO:0051286 GO:GO:0003924
GO:GO:0031410 GO:GO:0005778 GO:GO:0034332 PROSITE:PS51419
GO:GO:0051461 EMBL:AC016207 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0031346 GO:GO:0045046 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 OMA:TSFFRCL CTD:51762 KO:K07902 EMBL:AB038995
EMBL:AK001111 EMBL:AL833365 EMBL:BC020654 EMBL:U66624
IPI:IPI00024282 RefSeq:NP_057614.1 UniGene:Hs.389733
ProteinModelPortal:Q92930 SMR:Q92930 IntAct:Q92930 STRING:Q92930
PhosphoSite:Q92930 DMDM:13638434 PaxDb:Q92930 PeptideAtlas:Q92930
PRIDE:Q92930 DNASU:51762 Ensembl:ENST00000321437 GeneID:51762
KEGG:hsa:51762 UCSC:uc002alz.3 GeneCards:GC15P063481
HGNC:HGNC:30273 MIM:613532 neXtProt:NX_Q92930 PharmGKB:PA134944620
InParanoid:Q92930 PhylomeDB:Q92930 ChiTaRS:RAB8B GenomeRNAi:51762
NextBio:55874 ArrayExpress:Q92930 Bgee:Q92930 CleanEx:HS_RAB8B
Genevestigator:Q92930 GermOnline:ENSG00000166128 Uniprot:Q92930
Length = 207
Score = 107 (42.7 bits), Expect = 0.00057, P = 0.00057
Identities = 35/136 (25%), Positives = 65/136 (47%)
Query: 11 KVRAIIWN----EQYEKLTSSDETGLIIVWMLY----KPSYHRVEQDVIRLHEEGYLRTR 62
K++ IW+ E++ +T++ G + + ++Y + S+ ++ + IR EE
Sbjct: 56 KIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIK-NWIRNIEEHASSDV 114
Query: 63 PAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQI--RLK 120
+I+ NK D+ R VS + + LA + +KF+E S NV+E + I +L
Sbjct: 115 ERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLN 174
Query: 121 RSLVQTGGAQAAAPWK 136
R + + A A P K
Sbjct: 175 RKMNDSNSAGAGGPVK 190
>UNIPROTKB|Q5REC9 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9601
"Pongo abelii" [GO:0019003 "GDP binding" evidence=ISS] [GO:0034332
"adherens junction organization" evidence=ISS] [GO:0045335
"phagocytic vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0034332 PROSITE:PS51419
GO:GO:0019003 HOVERGEN:HBG009351 OrthoDB:EOG4K3KX6 HSSP:P55258
GeneTree:ENSGT00700000104031 OMA:TSFFRCL CTD:51762 KO:K07902
EMBL:CR857602 RefSeq:NP_001124875.1 UniGene:Pab.18127
ProteinModelPortal:Q5REC9 SMR:Q5REC9 PRIDE:Q5REC9
Ensembl:ENSPPYT00000007720 Ensembl:ENSPPYT00000033546
GeneID:100171739 KEGG:pon:100171739 InParanoid:Q5REC9
Uniprot:Q5REC9
Length = 207
Score = 107 (42.7 bits), Expect = 0.00057, P = 0.00057
Identities = 35/136 (25%), Positives = 65/136 (47%)
Query: 11 KVRAIIWN----EQYEKLTSSDETGLIIVWMLY----KPSYHRVEQDVIRLHEEGYLRTR 62
K++ IW+ E++ +T++ G + + ++Y + S+ ++ + IR EE
Sbjct: 56 KIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIK-NWIRNIEEHASSDV 114
Query: 63 PAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQI--RLK 120
+I+ NK D+ R VS + + LA + +KF+E S NV+E + I +L
Sbjct: 115 ERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLN 174
Query: 121 RSLVQTGGAQAAAPWK 136
R + + A A P K
Sbjct: 175 RKMNDSNSAGAGGPVK 190
>UNIPROTKB|Q8N4Z0 [details] [associations]
symbol:RAB42 "Putative Ras-related protein Rab-42"
species:9606 "Homo sapiens" [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 Pfam:PF00071 PRINTS:PR00449 GO:GO:0005525
GO:GO:0007264 GO:GO:0016020 EMBL:CH471059 PROSITE:PS51419
eggNOG:COG1100 EMBL:AK312176 EMBL:AL513497 EMBL:BC033175
IPI:IPI00843865 RefSeq:NP_001180461.1 RefSeq:NP_689517.1
UniGene:Hs.652321 ProteinModelPortal:Q8N4Z0 SMR:Q8N4Z0
DMDM:74751010 PRIDE:Q8N4Z0 Ensembl:ENST00000373826 GeneID:115273
KEGG:hsa:115273 UCSC:uc001bqu.3 CTD:115273 GeneCards:GC01P028918
HGNC:HGNC:28702 neXtProt:NX_Q8N4Z0 PharmGKB:PA134976516
HOGENOM:HOG000059540 InParanoid:Q8N4Z0 KO:K07929 OMA:MAFLETS
OrthoDB:EOG498V1X PhylomeDB:Q8N4Z0 ChiTaRS:RAB42 GenomeRNAi:115273
NextBio:79548 Bgee:Q8N4Z0 CleanEx:HS_RAB42 Genevestigator:Q8N4Z0
Uniprot:Q8N4Z0
Length = 105
Score = 91 (37.1 bits), Expect = 0.00057, P = 0.00057
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 65 IIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVD 107
++V +K DL R VS+Q+A+ LAAS + F+E SV + NVD
Sbjct: 12 LLVGHKSDLQSTRCVSAQEAEELAASLGMAFVETSVKNNCNVD 54
>UNIPROTKB|I3L5J7 [details] [associations]
symbol:LOC100623430 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0003924 PANTHER:PTHR24070 InterPro:IPR017358
PIRSF:PIRSF038017 OMA:KLDESWS GeneTree:ENSGT00700000104060
Ensembl:ENSSSCT00000025234 Uniprot:I3L5J7
Length = 289
Score = 110 (43.8 bits), Expect = 0.00060, P = 0.00060
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 52 RLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDEL 109
R H+ ++ P I+V NK DLA R VS ++ + A F KFIE S + HNV EL
Sbjct: 181 RTHQADHV---PIILVGNKADLAXCREVSVEEGRACAVVFDCKFIETSATLQHNVTEL 235
>WB|WBGene00004272 [details] [associations]
symbol:rab-8 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040039 "inductive cell migration" evidence=IMP]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0030538 "embryonic genitalia
morphogenesis" evidence=IMP] [GO:0010008 "endosome membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0009792 GO:GO:0006915 GO:GO:0007264 GO:GO:0003924
GO:GO:0071688 GO:GO:0048477 GO:GO:0009306 GO:GO:0010008
GO:GO:0040039 GO:GO:0030538 HSSP:P07560
GeneTree:ENSGT00700000104031 KO:K07901 OMA:SNVEQHA EMBL:AB112929
EMBL:FO080997 RefSeq:NP_491199.2 UniGene:Cel.23073
ProteinModelPortal:G5EFC1 SMR:G5EFC1 EnsemblMetazoa:D1037.4
GeneID:171935 KEGG:cel:CELE_D1037.4 CTD:171935 WormBase:D1037.4
NextBio:873315 Uniprot:G5EFC1
Length = 211
Score = 107 (42.7 bits), Expect = 0.00061, P = 0.00061
Identities = 32/128 (25%), Positives = 63/128 (49%)
Query: 11 KVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDV---IRLHEEGYLRTRP 63
K++ IW+ E++ +T++ G + + ++Y + R +++ IR EE
Sbjct: 56 KIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVE 115
Query: 64 AIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLK--R 121
+I+ NK D+ R VS + LA + KF+E S + N+DE + I+ K +
Sbjct: 116 RMIIGNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQ 175
Query: 122 SLVQTGGA 129
+ ++ GG+
Sbjct: 176 NEMRAGGS 183
>UNIPROTKB|G5EFC1 [details] [associations]
symbol:rab-8 "Rab8" species:6239 "Caenorhabditis elegans"
[GO:0006184 "GTP catabolic process" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0009792 GO:GO:0006915
GO:GO:0007264 GO:GO:0003924 GO:GO:0071688 GO:GO:0048477
GO:GO:0009306 GO:GO:0010008 GO:GO:0040039 GO:GO:0030538 HSSP:P07560
GeneTree:ENSGT00700000104031 KO:K07901 OMA:SNVEQHA EMBL:AB112929
EMBL:FO080997 RefSeq:NP_491199.2 UniGene:Cel.23073
ProteinModelPortal:G5EFC1 SMR:G5EFC1 EnsemblMetazoa:D1037.4
GeneID:171935 KEGG:cel:CELE_D1037.4 CTD:171935 WormBase:D1037.4
NextBio:873315 Uniprot:G5EFC1
Length = 211
Score = 107 (42.7 bits), Expect = 0.00061, P = 0.00061
Identities = 32/128 (25%), Positives = 63/128 (49%)
Query: 11 KVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDV---IRLHEEGYLRTRP 63
K++ IW+ E++ +T++ G + + ++Y + R +++ IR EE
Sbjct: 56 KIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVE 115
Query: 64 AIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLK--R 121
+I+ NK D+ R VS + LA + KF+E S + N+DE + I+ K +
Sbjct: 116 RMIIGNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQ 175
Query: 122 SLVQTGGA 129
+ ++ GG+
Sbjct: 176 NEMRAGGS 183
>ZFIN|ZDB-GENE-040426-2818 [details] [associations]
symbol:rap2b "RAP2B, member of RAS oncogene
family" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
SMART:SM00173 ZFIN:ZDB-GENE-040426-2818 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020 GO:GO:0003924
eggNOG:COG1100 HOVERGEN:HBG009351 PANTHER:PTHR24070
HOGENOM:HOG000233973 GeneTree:ENSGT00700000104149 OrthoDB:EOG4P2Q3G
KO:K07838 CTD:5912 OMA:RVCAVEL HSSP:P10114 EMBL:CU640433
EMBL:BC054999 IPI:IPI00508529 RefSeq:NP_001001729.1 UniGene:Dr.1058
SMR:Q7SY59 Ensembl:ENSDART00000058967 GeneID:414329 KEGG:dre:414329
InParanoid:Q7SY59 NextBio:20818687 Uniprot:Q7SY59
Length = 182
Score = 105 (42.0 bits), Expect = 0.00061, P = 0.00061
Identities = 32/91 (35%), Positives = 48/91 (52%)
Query: 31 GLIIVWMLY-KPSYHRVE---QDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKN 86
G I+V+ L + S+ ++ +IR+ Y R P I+V NK+DL R VSS + K
Sbjct: 77 GFILVYSLVNQQSFQDIKPMRDQIIRVKR--YERV-PMILVGNKVDLEGEREVSSGEGKA 133
Query: 87 LAASFKVKFIEVSVGIHHNVDELLVGILNQI 117
LA + F+E S +VDEL I+ Q+
Sbjct: 134 LADEWSCPFMETSAKNKGSVDELFAEIVRQM 164
>RGD|727778 [details] [associations]
symbol:Rhebl1 "Ras homolog enriched in brain like 1"
species:10116 "Rattus norvegicus" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0031929 "TOR signaling cascade"
evidence=IEA;ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA;ISO] InterPro:IPR001806
InterPro:IPR005225 InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449
PROSITE:PS51421 SMART:SM00173 RGD:727778 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737 GO:GO:0007264
GO:GO:0031929 GO:GO:0003924 GO:GO:0051092 eggNOG:COG1100
HOVERGEN:HBG009351 PANTHER:PTHR24070 HOGENOM:HOG000233973
CTD:121268 KO:K07849 OrthoDB:EOG4VMFGG OMA:ERRCRLM HSSP:Q15382
GeneTree:ENSGT00660000095554 EMBL:AY327411 IPI:IPI00382177
RefSeq:NP_877977.1 UniGene:Rn.43211 ProteinModelPortal:Q7TNZ5
SMR:Q7TNZ5 PhosphoSite:Q7TNZ5 Ensembl:ENSRNOT00000035659
GeneID:359959 KEGG:rno:359959 UCSC:RGD:727778 InParanoid:Q7TNZ5
NextBio:672712 Genevestigator:Q7TNZ5 Uniprot:Q7TNZ5
Length = 183
Score = 105 (42.0 bits), Expect = 0.00063, P = 0.00063
Identities = 25/97 (25%), Positives = 55/97 (56%)
Query: 31 GLIIVWMLYKPSYHRVEQDVIRLHEEGYLRTR-PAIIVANKIDLARARAVSSQDAKNLAA 89
G ++V+ + ++ +++ + +EG+ +TR P ++V NK DL+ R V + + K LA
Sbjct: 80 GYVLVYNVTSLRSFQIVKNLYQKLQEGHGKTRLPVLLVGNKADLSADREVQAVEGKKLAE 139
Query: 90 SFKVKFIEVSVGIHHNVDELLVGILNQI-RLKRSLVQ 125
S+ F+E S + + ++ + ++ +I R++ S Q
Sbjct: 140 SWGATFMESSARDNQLIQDIFIRVIQEIARVENSYGQ 176
>TAIR|locus:2024992 [details] [associations]
symbol:RABA2b "RAB GTPase homolog A2B" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0009504 "cell plate" evidence=IDA] [GO:0006457
"protein folding" evidence=RCA] [GO:0009408 "response to heat"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0010008 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0009504 EMBL:AC022464 KO:K07976
IPI:IPI00522346 PIR:A86209 RefSeq:NP_172221.1 UniGene:At.51514
HSSP:P07560 ProteinModelPortal:Q9LNW1 SMR:Q9LNW1 PaxDb:Q9LNW1
PRIDE:Q9LNW1 EnsemblPlants:AT1G07410.1 GeneID:837253
KEGG:ath:AT1G07410 TAIR:At1g07410 InParanoid:Q9LNW1 OMA:QVDNKTV
Genevestigator:Q9LNW1 Uniprot:Q9LNW1
Length = 214
Score = 107 (42.7 bits), Expect = 0.00063, P = 0.00063
Identities = 34/122 (27%), Positives = 65/122 (53%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIR-LHE-E 56
++LQ V+A IW+ E+Y +TS+ G + ++Y + + ++V+R L E
Sbjct: 52 RTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELR 111
Query: 57 GYLRTRPAIIVA-NKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILN 115
+ + I++A NK DL R+V+ +D ++LA + F+E S N+++ IL+
Sbjct: 112 DHADSNIVIMMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILS 171
Query: 116 QI 117
+I
Sbjct: 172 EI 173
>TAIR|locus:2024276 [details] [associations]
symbol:RAB11c "RAB GTPase 11C" species:3702 "Arabidopsis
thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005886
"plasma membrane" evidence=ISM;IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0005768 "endosome" evidence=IDA] [GO:0009504 "cell plate"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0019932
"second-messenger-mediated signaling" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0010008 GO:GO:0000910
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0009504 EMBL:AC000132
KO:K07976 HOGENOM:HOG000233968 EMBL:U74669 EMBL:AY045620
EMBL:AY133657 EMBL:AY085684 IPI:IPI00547311 PIR:A86230
RefSeq:NP_172434.1 UniGene:At.20265 ProteinModelPortal:O04486
SMR:O04486 IntAct:O04486 STRING:O04486 PaxDb:O04486 PRIDE:O04486
EnsemblPlants:AT1G09630.1 GeneID:837490 KEGG:ath:AT1G09630
TAIR:At1g09630 InParanoid:O04486 OMA:AKKPCCS PhylomeDB:O04486
ProtClustDB:CLSN2679279 Genevestigator:O04486 GermOnline:AT1G09630
Uniprot:O04486
Length = 217
Score = 107 (42.7 bits), Expect = 0.00066, P = 0.00066
Identities = 38/149 (25%), Positives = 73/149 (48%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSS---DETGLIIVWMLYKPS-YHRVEQDVIRLH 54
++LQ V+A IW+ E+Y +TS+ G ++V+ + KP+ + V + + L
Sbjct: 52 RTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELR 111
Query: 55 EEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGIL 114
+ +++ NK DL RAV+++DA++ A + FIE S NV++ IL
Sbjct: 112 DHADSNI-VIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTIL 170
Query: 115 NQIR--LKRSLVQTGGAQAAAPWKSNTTL 141
+++ + + + + A A K T+
Sbjct: 171 SEVYRIISKKSISSDQTTANANIKEGQTI 199
>TAIR|locus:2168469 [details] [associations]
symbol:RABA2D "RAB GTPase homolog A2D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0009504
"cell plate" evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0010008 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0009504 EMBL:AB016890 KO:K07976 HOGENOM:HOG000233968
HSSP:P07560 ProtClustDB:PLN03110 EMBL:AF370127 EMBL:AY040051
IPI:IPI00533551 RefSeq:NP_200723.1 UniGene:At.24606
ProteinModelPortal:Q9FIF9 SMR:Q9FIF9 PaxDb:Q9FIF9 PRIDE:Q9FIF9
EnsemblPlants:AT5G59150.1 GeneID:836033 KEGG:ath:AT5G59150
TAIR:At5g59150 InParanoid:Q9FIF9 OMA:VEQDYDY PhylomeDB:Q9FIF9
Genevestigator:Q9FIF9 Uniprot:Q9FIF9
Length = 217
Score = 107 (42.7 bits), Expect = 0.00066, P = 0.00066
Identities = 40/149 (26%), Positives = 74/149 (49%)
Query: 3 QSLQGHSGKVRAIIWN----EQYEKLTSSDETGLIIVWMLYKPSYHRVEQDVIR-LHE-E 56
++LQ V+A IW+ E+Y +TS+ G + ++Y + + +V+R L E
Sbjct: 52 RTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELR 111
Query: 57 GYLRTRPAIIVA-NKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILN 115
+ + I++A NK DL R+V+ +D + LA + + F+E S NV++ +L
Sbjct: 112 DHADSNIVIMMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLA 171
Query: 116 QIR---LKRSLV--QTGGAQAAAPWKSNT 139
+I K++L + A +A P + T
Sbjct: 172 EIYHIISKKALAAQEAAAANSAIPGQGTT 200
>UNIPROTKB|I3LBP8 [details] [associations]
symbol:RIT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421
SMART:SM00173 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0003924 PANTHER:PTHR24070
GeneTree:ENSGT00700000104060 CTD:6016 KO:K07832 OMA:MERWLFL
EMBL:CU151868 EMBL:GACC01000043 RefSeq:NP_001070698.2
UniGene:Ssc.27535 Ensembl:ENSSSCT00000025383 GeneID:100155905
KEGG:ssc:100155905 Uniprot:I3LBP8
Length = 218
Score = 107 (42.7 bits), Expect = 0.00067, P = 0.00067
Identities = 30/120 (25%), Positives = 55/120 (45%)
Query: 2 NQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLY-KPSYHRVEQDVIRLHEEGYLR 60
N + +G+ +QY + + E G II + + + S+H V + ++
Sbjct: 69 NLDILDTAGQAEFTAMRDQYMR---AGE-GFIICYSITDRRSFHEVREFKQLIYRVRRTD 124
Query: 61 TRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQIRLK 120
P ++V NK DL + R VS ++ LA F F E S + +D++ ++ +IR K
Sbjct: 125 DTPVVLVGNKSDLKQLRQVSKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRK 184
>UNIPROTKB|B2RAA6 [details] [associations]
symbol:RAB26 "cDNA, FLJ94800, Homo sapiens RAB26, member
RAS oncogene family (RAB26), mRNA" species:9606 "Homo sapiens"
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0017157 "regulation of
exocytosis" evidence=IEA] [GO:0031226 "intrinsic to plasma
membrane" evidence=IEA] [GO:0035272 "exocrine system development"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0031226 EMBL:AC009065 HOVERGEN:HBG009351 GO:GO:0017157
GO:GO:0035272 UniGene:Hs.3797 HGNC:HGNC:14259 ChiTaRS:RAB26
EMBL:AK314110 IPI:IPI01011362 SMR:B2RAA6 STRING:B2RAA6
Ensembl:ENST00000541451 Uniprot:B2RAA6
Length = 190
Score = 105 (42.0 bits), Expect = 0.00074, P = 0.00074
Identities = 33/131 (25%), Positives = 66/131 (50%)
Query: 2 NQSLQGHSGKVRAIIWN----EQYEKLTSS---DETGLIIVW-MLYKPSYHRVEQDVIRL 53
N+ L KV+ +W+ E++ +T + D L++++ + K S+ ++ + +
Sbjct: 37 NKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEI 96
Query: 54 HEEGYLRTRPAI-IVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVG 112
HE Y + A+ ++ NK+D A R V +D + LA + + F+E S NVD
Sbjct: 97 HE--YAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTA 154
Query: 113 ILNQIRLKRSL 123
I +++ +RS+
Sbjct: 155 IAKELK-QRSM 164
>CGD|CAL0001430 [details] [associations]
symbol:YPT1 species:5476 "Candida albicans" [GO:0009306
"protein secretion" evidence=IGI;IMP] [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0035690 "cellular response
to drug" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IMP]
[GO:0005795 "Golgi stack" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000407
"pre-autophagosomal structure" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0034498 "early endosome to Golgi transport" evidence=IEA]
[GO:0048211 "Golgi vesicle docking" evidence=IEA] [GO:0032258 "CVT
pathway" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0035494 "SNARE complex disassembly" evidence=IEA]
[GO:0090114 "COPII-coated vesicle budding" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] [GO:0048194 "Golgi vesicle budding" evidence=IEA]
[GO:0070317 "negative regulation of G0 to G1 transition"
evidence=IEA] [GO:0032456 "endocytic recycling" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=IEA] [GO:0016236
"macroautophagy" evidence=IEA] [GO:0000149 "SNARE binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 CGD:CAL0001430
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
EMBL:AACQ01000017 EMBL:AACQ01000015 GO:GO:0009306 GO:GO:0035690
GO:GO:0006888 eggNOG:COG1100 GO:GO:0000390 HOGENOM:HOG000233968
KO:K07874 RefSeq:XP_721279.1 RefSeq:XP_721550.1
ProteinModelPortal:Q5AI00 SMR:Q5AI00 STRING:Q5AI00 GeneID:3636915
GeneID:3637145 KEGG:cal:CaO19.10570 KEGG:cal:CaO19.3052
Uniprot:Q5AI00
Length = 207
Score = 106 (42.4 bits), Expect = 0.00077, P = 0.00077
Identities = 40/144 (27%), Positives = 70/144 (48%)
Query: 10 GK-VRAIIWN----EQYEKLTSS---DETGLIIVW-MLYKPSYHRVEQ---DVIRLHEEG 57
GK ++ IW+ E++ +TSS G+IIV+ + + S++ V+Q ++ R G
Sbjct: 54 GKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGG 113
Query: 58 YLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQI 117
++ ++V NK DL+ + V AK A + + F+E S NV++ + QI
Sbjct: 114 VMK----LLVGNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
Query: 118 RLKRSLVQTGGAQAAAPWKSNTTL 141
+ + + G A A KSN L
Sbjct: 170 KAQMTNNANAGNAANAKGKSNVNL 193
>UNIPROTKB|Q5AI00 [details] [associations]
symbol:YPT1 "Likely RAB family GTP binding protein involved
in secretion" species:237561 "Candida albicans SC5314" [GO:0000390
"spliceosomal complex disassembly" evidence=ISS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0009306 "protein
secretion" evidence=IGI;IMP] [GO:0035690 "cellular response to
drug" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
CGD:CAL0001430 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 EMBL:AACQ01000017 EMBL:AACQ01000015 GO:GO:0009306
GO:GO:0035690 GO:GO:0006888 eggNOG:COG1100 GO:GO:0000390
HOGENOM:HOG000233968 KO:K07874 RefSeq:XP_721279.1
RefSeq:XP_721550.1 ProteinModelPortal:Q5AI00 SMR:Q5AI00
STRING:Q5AI00 GeneID:3636915 GeneID:3637145 KEGG:cal:CaO19.10570
KEGG:cal:CaO19.3052 Uniprot:Q5AI00
Length = 207
Score = 106 (42.4 bits), Expect = 0.00077, P = 0.00077
Identities = 40/144 (27%), Positives = 70/144 (48%)
Query: 10 GK-VRAIIWN----EQYEKLTSS---DETGLIIVW-MLYKPSYHRVEQ---DVIRLHEEG 57
GK ++ IW+ E++ +TSS G+IIV+ + + S++ V+Q ++ R G
Sbjct: 54 GKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGG 113
Query: 58 YLRTRPAIIVANKIDLARARAVSSQDAKNLAASFKVKFIEVSVGIHHNVDELLVGILNQI 117
++ ++V NK DL+ + V AK A + + F+E S NV++ + QI
Sbjct: 114 VMK----LLVGNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
Query: 118 RLKRSLVQTGGAQAAAPWKSNTTL 141
+ + + G A A KSN L
Sbjct: 170 KAQMTNNANAGNAANAKGKSNVNL 193
>UNIPROTKB|F1MFE7 [details] [associations]
symbol:RHEBL1 "GTPase RhebL1" species:9913 "Bos taurus"
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0031929 "TOR signaling cascade"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR020849
Pfam:PF00071 PRINTS:PR00449 PROSITE:PS51421 SMART:SM00173
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264
GO:GO:0016020 GO:GO:0031929 GO:GO:0003924 GO:GO:0051092
PANTHER:PTHR24070 IPI:IPI00708286 OMA:ERRCRLM
GeneTree:ENSGT00660000095554 EMBL:DAAA02012950 EMBL:DAAA02012951
Ensembl:ENSBTAT00000008614 Uniprot:F1MFE7
Length = 180
Score = 104 (41.7 bits), Expect = 0.00080, P = 0.00080
Identities = 30/98 (30%), Positives = 53/98 (54%)
Query: 31 GLIIVWMLYK-PSYHRVEQDVIRLHEEGYLRTR-PAIIVANKIDLARARAVSSQDAKNLA 88
G ++V+ + S+ +E +LHE G+ +TR P ++V NK DL+ R V + + K LA
Sbjct: 77 GYVLVYSVTSLHSFQVIESLYQKLHE-GHGKTRLPVVLVGNKADLSPDREVQAVEGKKLA 135
Query: 89 ASFKVKFIEVSVGIHHNVDELLVGILNQI-RLKRSLVQ 125
AS+ F+E S + + ++ +I R++ S Q
Sbjct: 136 ASWGATFMESSARNNQLTQGIFTKVIQEIARVENSYGQ 173
>UNIPROTKB|Q7YS69 [details] [associations]
symbol:RHEBL1 "GTPase RhebL1" species:9913 "Bos taurus"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR001806
InterPro:IPR005225 InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449
PROSITE:PS51421 SMART:SM00173 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0007264 GO:GO:0003924
eggNOG:COG1100 HOVERGEN:HBG009351 PANTHER:PTHR24070
HOGENOM:HOG000233973 EMBL:AY293823 IPI:IPI00708286
RefSeq:NP_858054.1 UniGene:Bt.22959 HSSP:Q96HU8
ProteinModelPortal:Q7YS69 SMR:Q7YS69 PRIDE:Q7YS69 GeneID:353300
KEGG:bta:353300 CTD:121268 InParanoid:Q7YS69 KO:K07849
OrthoDB:EOG4VMFGG NextBio:20812728 Uniprot:Q7YS69
Length = 181
Score = 104 (41.7 bits), Expect = 0.00082, P = 0.00082
Identities = 30/98 (30%), Positives = 53/98 (54%)
Query: 31 GLIIVWMLYK-PSYHRVEQDVIRLHEEGYLRTR-PAIIVANKIDLARARAVSSQDAKNLA 88
G ++V+ + S+ +E +LHE G+ +TR P ++V NK DL+ R V + + K LA
Sbjct: 78 GYVLVYSVTSLHSFQVIESLYQKLHE-GHGKTRLPVVLVGNKADLSPDREVQAVEGKKLA 136
Query: 89 ASFKVKFIEVSVGIHHNVDELLVGILNQI-RLKRSLVQ 125
AS+ F+E S + + ++ +I R++ S Q
Sbjct: 137 ASWGATFMESSARNNQLTQGIFTKVIQEIARVENSYGQ 174
>UNIPROTKB|Q9H0T7 [details] [associations]
symbol:RAB17 "Ras-related protein Rab-17" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0002415
"immunoglobulin transcytosis in epithelial cells mediated by
polymeric immunoglobulin receptor" evidence=ISS] [GO:0032401
"establishment of melanosome localization" evidence=ISS]
[GO:0032402 "melanosome transport" evidence=ISS] [GO:0032456
"endocytic recycling" evidence=ISS] [GO:0045056 "transcytosis"
evidence=ISS] [GO:0046847 "filopodium assembly" evidence=ISS]
[GO:0050773 "regulation of dendrite development" evidence=ISS]
[GO:0051489 "regulation of filopodium assembly" evidence=ISS]
[GO:0051963 "regulation of synapse assembly" evidence=ISS]
[GO:0016323 "basolateral plasma membrane" evidence=ISS] [GO:0016324
"apical plasma membrane" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0042470 "melanosome" evidence=ISS] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0055037 "recycling endosome"
evidence=ISS] [GO:0055038 "recycling endosome membrane"
evidence=ISS] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005622
"intracellular" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470 GO:GO:0007264
GO:GO:0015031 GO:GO:0016324 EMBL:CH471063 GO:GO:0043025
GO:GO:0030425 GO:GO:0016323 GO:GO:0051963 PROSITE:PS51419
GO:GO:0050773 GO:GO:0032456 GO:GO:0046847 GO:GO:0055038
eggNOG:COG1100 GO:GO:0051489 GO:GO:0019003 GO:GO:0032402
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:AL136645 EMBL:AK022600
EMBL:CR457282 EMBL:AC104667 EMBL:BC000929 EMBL:BC050426
IPI:IPI00007866 RefSeq:NP_071894.1 UniGene:Hs.44278
ProteinModelPortal:Q9H0T7 SMR:Q9H0T7 IntAct:Q9H0T7
MINT:MINT-1422334 STRING:Q9H0T7 PhosphoSite:Q9H0T7 DMDM:37999892
PaxDb:Q9H0T7 PRIDE:Q9H0T7 DNASU:64284 Ensembl:ENST00000264601
GeneID:64284 KEGG:hsa:64284 UCSC:uc002vwz.2 CTD:64284
GeneCards:GC02M238499 HGNC:HGNC:16523 HPA:HPA035176 MIM:602206
neXtProt:NX_Q9H0T7 PharmGKB:PA34105 InParanoid:Q9H0T7 KO:K07909
OMA:KLLFMET OrthoDB:EOG4JT06J PhylomeDB:Q9H0T7 GenomeRNAi:64284
NextBio:66211 ArrayExpress:Q9H0T7 Bgee:Q9H0T7 CleanEx:HS_RAB17
Genevestigator:Q9H0T7 GermOnline:ENSG00000124839 GO:GO:0002415
Uniprot:Q9H0T7
Length = 212
Score = 106 (42.4 bits), Expect = 0.00083, P = 0.00083
Identities = 28/91 (30%), Positives = 51/91 (56%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
L++ + K S+ + +Q + L EE + ++V NK DL++ R V+ Q+ K A S
Sbjct: 95 LLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLSQEREVTFQEGKEFADSQ 154
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQIRLKRS 122
K+ F+E S ++H V E+ + ++ L+RS
Sbjct: 155 KLLFMETSAKLNHQVSEVFNTVAQEL-LQRS 184
>UNIPROTKB|I3L9K0 [details] [associations]
symbol:I3L9K0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GeneTree:ENSGT00640000091139 Ensembl:ENSSSCT00000024770 OMA:ASAKENH
Uniprot:I3L9K0
Length = 214
Score = 106 (42.4 bits), Expect = 0.00085, P = 0.00085
Identities = 25/86 (29%), Positives = 46/86 (53%)
Query: 32 LIIVWMLYKPSYHRVEQDVIRLHEEGYLRTRPAIIVANKIDLARARAVSSQDAKNLAASF 91
L++ + K S+ + +Q + L EE L ++V NK+DL + R ++S++ K A S
Sbjct: 95 LVVYDVTRKDSFLKAQQWLKDLEEEFRLGDVVVMLVGNKLDLGKERKITSEEGKEFAESK 154
Query: 92 KVKFIEVSVGIHHNVDELLVGILNQI 117
+ F+E S ++H V E I ++
Sbjct: 155 GLLFMETSAKLNHQVTEAFGAIAQEL 180
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 238 238 0.00091 113 3 11 22 0.43 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 139
No. of states in DFA: 605 (64 KB)
Total size of DFA: 189 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.41u 0.05s 19.46t Elapsed: 00:00:13
Total cpu time: 19.43u 0.05s 19.48t Elapsed: 00:00:13
Start: Thu Aug 15 14:21:28 2013 End: Thu Aug 15 14:21:41 2013
WARNINGS ISSUED: 1