RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy14043
(205 letters)
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 108 bits (273), Expect = 6e-29
Identities = 36/92 (39%), Positives = 54/92 (58%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
+TDMWSLG L+Y+LLSG++PFL E+ ++ +I A+Y+F E IS+ A + + +
Sbjct: 181 STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDR 240
Query: 76 LLNTHADKRPTAGQLLQVAWFAEIAIPNNTKV 107
LL R TA + LQ W + +TKV
Sbjct: 241 LLVKERKSRMTASEALQHPWLKQKIERVSTKV 272
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 107 bits (269), Expect = 3e-28
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
+TDMW++G++ Y+LL+ SPF+ E +ET +IS + + E +S A + I
Sbjct: 211 TTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQS 270
Query: 76 LLNTHADKRPTAGQLLQVAWFAEIAIPNNTK 106
LL + +KRPTA L +W + N
Sbjct: 271 LLVKNPEKRPTAEICLSHSWLQQWDFENLFH 301
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 106 bits (266), Expect = 3e-28
Identities = 37/88 (42%), Positives = 51/88 (57%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
G DMWS+GV+ YILLSG SPFL E+++ET +IS +Y F E + S A++ I +
Sbjct: 189 GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 248
Query: 76 LLNTHADKRPTAGQLLQVAWFAEIAIPN 103
LL +R T Q L+ +W I N
Sbjct: 249 LLVKDPKRRMTIAQSLEHSWIKAIRRRN 276
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 107 bits (268), Expect = 5e-28
Identities = 34/90 (37%), Positives = 48/90 (53%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
G DMWS+GV+ YILLSG SPFL ++++ET A+I+ Y F E S A++ I +
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255
Query: 76 LLNTHADKRPTAGQLLQVAWFAEIAIPNNT 105
LL KR T + L+ W +
Sbjct: 256 LLVKETRKRLTIQEALRHPWITPVDTQQAM 285
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 106 bits (266), Expect = 6e-28
Identities = 35/90 (38%), Positives = 49/90 (54%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
G DMWS+GV+ YILLSG SPFL ++++ET A+I+ Y F E H S A++ I +
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255
Query: 76 LLNTHADKRPTAGQLLQVAWFAEIAIPNNT 105
LL KR T + L+ W +
Sbjct: 256 LLVKETRKRLTIQEALRHPWITPVDNQQAM 285
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 106 bits (266), Expect = 7e-28
Identities = 35/89 (39%), Positives = 48/89 (53%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
G DMWS+GV+ YILLSG SPFL ++++ET A++S +Y F E + S A++ I +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 76 LLNTHADKRPTAGQLLQVAWFAEIAIPNN 104
LL KR T LQ W
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPKDTQQA 283
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 106 bits (267), Expect = 8e-28
Identities = 31/89 (34%), Positives = 50/89 (56%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
TDMWS+GV+ Y+LLSG+SPFL +++ ET +I + E+ IS A+E I +
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISK 325
Query: 76 LLNTHADKRPTAGQLLQVAWFAEIAIPNN 104
LL R +A + L+ W ++ + +
Sbjct: 326 LLIKEKSWRISASEALKHPWLSDHKLHSR 354
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 106 bits (267), Expect = 1e-27
Identities = 31/95 (32%), Positives = 47/95 (49%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
G TDMW++GVL Y+LLSG+SPF E + ET ++ D+ F + +S A++ I
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN 287
Query: 76 LLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCL 110
LL KR T L+ W +++
Sbjct: 288 LLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSS 322
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 107 bits (269), Expect = 2e-27
Identities = 33/91 (36%), Positives = 47/91 (51%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
G TDMWS+GVL YILLSG+SPF E+++ET ++ D++ IS ++ I +
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRK 393
Query: 76 LLNTHADKRPTAGQLLQVAWFAEIAIPNNTK 106
LL + R T Q L+ W P
Sbjct: 394 LLLADPNTRMTIHQALEHPWLTPGNAPGRDS 424
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 101 bits (254), Expect = 2e-26
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
D+WS GV++Y LL+G PF S EE + + + ++ E C ++ A +L+ Q
Sbjct: 203 TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE-CRPLTPQAVDLLKQ 261
Query: 76 LLNTHADKRPTAGQLLQVAWFAE 98
+L ++RP+A Q+L WF +
Sbjct: 262 MLTKDPERRPSAAQVLHHEWFKQ 284
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 101 bits (254), Expect = 3e-26
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
GP D WS GVLL++LL G PF ++ +T + + F +S AR+L+
Sbjct: 254 GPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSN 313
Query: 76 LLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVN 108
LLN + D+R A + LQ W ++ + K++
Sbjct: 314 LLNRNVDERFDAMRALQHPWISQFS-DKIYKMS 345
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 99 bits (250), Expect = 7e-26
Identities = 40/142 (28%), Positives = 55/142 (38%), Gaps = 33/142 (23%)
Query: 2 NGAVLKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLS 33
GA +KL D G + D+W+ GV+LYILL
Sbjct: 143 KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 202
Query: 34 GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV 93
G PF DE + A I Y +P + ++ A+ LI +L + KR TA Q L+V
Sbjct: 203 GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262
Query: 94 AWFAEIA-----IPNNTKVNCL 110
W I V+CL
Sbjct: 263 PWICNRERVASAIHRQDTVDCL 284
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 99.6 bits (249), Expect = 1e-25
Identities = 25/89 (28%), Positives = 39/89 (43%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
G DMWS GV++Y LL+G PF + I +Y F + S ++L+ +
Sbjct: 207 GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 266
Query: 76 LLNTHADKRPTAGQLLQVAWFAEIAIPNN 104
L KR TA + L +F + +
Sbjct: 267 FLVVQPQKRYTAEEALAHPFFQQYVVEEV 295
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 99.2 bits (248), Expect = 1e-25
Identities = 29/83 (34%), Positives = 44/83 (53%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
GP D WS GV++Y+LL G PF ++ E I ++FP + ++S A LI +
Sbjct: 185 GPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRR 244
Query: 76 LLNTHADKRPTAGQLLQVAWFAE 98
LL +R T+ Q L+ WF +
Sbjct: 245 LLTKSPKQRITSLQALEHEWFEK 267
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 99.2 bits (248), Expect = 2e-25
Identities = 27/89 (30%), Positives = 39/89 (43%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
+ D WS+GV+ YILL G PF +E+E + I Y F IS A++ I
Sbjct: 185 SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICH 244
Query: 76 LLNTHADKRPTAGQLLQVAWFAEIAIPNN 104
LL ++R T + L W +
Sbjct: 245 LLEKDPNERYTCEKALSHPWIDGNTALHR 273
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 98.9 bits (247), Expect = 3e-25
Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 11/107 (10%)
Query: 3 GAVLKLID-------LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETR----AHIS 51
A+LKL D G S DMWSLGV++YILL G PF I
Sbjct: 156 NAILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 215
Query: 52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE 98
+ Y FP + +S + LI LL T +R T + + W +
Sbjct: 216 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 262
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 99.7 bits (249), Expect = 3e-25
Identities = 36/125 (28%), Positives = 50/125 (40%), Gaps = 28/125 (22%)
Query: 2 NGAVLKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLS 33
GA +KL D G + D+W+ GV+LYILL
Sbjct: 166 KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 225
Query: 34 GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV 93
G PF DE + A I Y +P + ++ A+ LI +L + KR TA Q L+V
Sbjct: 226 GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285
Query: 94 AWFAE 98
W
Sbjct: 286 PWICN 290
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 99.7 bits (249), Expect = 7e-25
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 29/126 (23%)
Query: 2 NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILL 32
GA +KL D G + G D+W+ GV+LYILL
Sbjct: 148 KGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILL 207
Query: 33 SGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ 92
G PF DE + I Y FP + ++ A++LI ++L + KR TA + L+
Sbjct: 208 VGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267
Query: 93 VAWFAE 98
W +
Sbjct: 268 HPWISH 273
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 97.3 bits (243), Expect = 7e-25
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 27/124 (21%)
Query: 4 AVLKLIDLGSSA---------------------------GPSTDMWSLGVLLYILLSGVS 36
+K+ID G S D+WS GV+LYILLSG
Sbjct: 161 CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTP 220
Query: 37 PFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF 96
PF ++E + + Y+F Q IS A++LI ++L H R TA Q L+ W
Sbjct: 221 PFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280
Query: 97 AEIA 100
+ +
Sbjct: 281 QKYS 284
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 99.8 bits (249), Expect = 9e-25
Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 27/125 (21%)
Query: 3 GAVLKLIDLGSSA---------------------------GPSTDMWSLGVLLYILLSGV 35
+K++D G S+ D+WS GV++YILL G
Sbjct: 185 LLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGY 244
Query: 36 SPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 95
PF +++++ + Y F +IS A+ELI +L +KR TA + L W
Sbjct: 245 PPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRW 304
Query: 96 FAEIA 100
+ A
Sbjct: 305 IKKYA 309
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 98.2 bits (245), Expect = 3e-24
Identities = 37/130 (28%), Positives = 53/130 (40%), Gaps = 27/130 (20%)
Query: 3 GAVLKLIDLGSSA---------------------------GPSTDMWSLGVLLYILLSGV 35
+K+ID G S D+WS GV+LYILLSG
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGT 219
Query: 36 SPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 95
PF ++E + + Y+F Q IS A++LI ++L H R TA Q L+ W
Sbjct: 220 PPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
Query: 96 FAEIAIPNNT 105
+ + T
Sbjct: 280 IQKYSSETPT 289
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 98.2 bits (245), Expect = 3e-24
Identities = 32/121 (26%), Positives = 47/121 (38%), Gaps = 27/121 (22%)
Query: 3 GAVLKLIDLGSSA---------------------------GPSTDMWSLGVLLYILLSGV 35
A +++ID G S D+WS GV+LYILLSG
Sbjct: 165 DANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGC 224
Query: 36 SPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 95
PF +E + + Y+F Q +S A++LI ++L R +A L W
Sbjct: 225 PPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284
Query: 96 F 96
Sbjct: 285 I 285
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 96.2 bits (240), Expect = 4e-24
Identities = 34/126 (26%), Positives = 46/126 (36%), Gaps = 30/126 (23%)
Query: 2 NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILL 32
N A +KL G + G D+W GV+L+ILL
Sbjct: 168 NSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILL 227
Query: 33 SGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ 92
SG PF E I Y P Q HIS A++L+ ++L +R T + L
Sbjct: 228 SGCLPFYGTKERLFEG-IIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286
Query: 93 VAWFAE 98
W E
Sbjct: 287 HPWLKE 292
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 96.2 bits (240), Expect = 5e-24
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPF---LDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
+ D+WSLGVLLY +L+G +PF D++ EE A I +S +S A++L
Sbjct: 198 DAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDL 257
Query: 73 IGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVN 108
+ ++L+ +R TA +L+ W ++N
Sbjct: 258 VSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLN 293
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 95.8 bits (239), Expect = 5e-24
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEET-RAHISVADYSFPPEQCGHISVPARELIG 74
+ D WSLGV+L+I LSG PF + + + + I+ Y+F PE +S A +L+
Sbjct: 197 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVK 256
Query: 75 QLLNTHADKRPTAGQLLQVAWFAEIAIPNN 104
+LL R T + L+ W + +
Sbjct: 257 KLLVVDPKARFTTEEALRHPWLQDEDMKRK 286
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 97.5 bits (243), Expect = 6e-24
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 27/133 (20%)
Query: 3 GAVLKLIDLGSSA---------------------------GPSTDMWSLGVLLYILLSGV 35
A++K++D G SA D+WS+GV+L+ILL+G
Sbjct: 175 DALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGY 234
Query: 36 SPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 95
PF ++++E + Y+F + ++S A++LI Q+L + +R +A Q L+ W
Sbjct: 235 PPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPW 294
Query: 96 FAEIAIPNNTKVN 108
E+ + +
Sbjct: 295 IKEMCSKKESGIE 307
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 95.9 bits (239), Expect = 7e-24
Identities = 26/81 (32%), Positives = 38/81 (46%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
G D+W+ GV+L+ LL+G PF + I Y F + S ++LI +
Sbjct: 283 GKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISR 342
Query: 76 LLNTHADKRPTAGQLLQVAWF 96
LL + R TA Q LQ +F
Sbjct: 343 LLQVDPEARLTAEQALQHPFF 363
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 96.7 bits (241), Expect = 7e-24
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEET-RAHISVADYSFPPEQCGHISVPARELIG 74
+ D WSLGV+L+I LSG PF + + + + I+ Y+F PE +S A +L+
Sbjct: 322 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVK 381
Query: 75 QLLNTHADKRPTAGQLLQVAWFAEIAIPNNTK 106
+LL R T + L+ W + + +
Sbjct: 382 KLLVVDPKARFTTEEALRHPWLQDEDMKRKFQ 413
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 95.5 bits (238), Expect = 1e-23
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDE-SEEETRAHISVADYSFPPEQCGHISVPARELIG 74
GP DMWS+G++ YILL G PF DE ++ I +Y F +S+ A++L+
Sbjct: 228 GPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVR 287
Query: 75 QLLNTHADKRPTAGQLLQVAWFAEIA 100
+L+ KR T Q LQ W A
Sbjct: 288 KLIVLDPKKRLTTFQALQHPWVTGKA 313
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 95.1 bits (237), Expect = 1e-23
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH----ISVADYSFPPEQCGHISVPARE 71
S DMWSLGV++YILL G PF + + I + Y FP + +S A++
Sbjct: 207 DKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQ 266
Query: 72 LIGQLLNTHADKRPTAGQLLQVAWFAE 98
LI LL T +R T Q + W +
Sbjct: 267 LIRLLLKTDPTERLTITQFMNHPWINQ 293
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 93.9 bits (234), Expect = 2e-23
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH-------ISVADYSFPPEQCGHISVP 68
S D+WSLGV+LY +LSG PF T I D+SF E ++S
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQE 246
Query: 69 ARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNT 105
A++LI LL +KR L W + + ++
Sbjct: 247 AKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSN 283
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 92.6 bits (231), Expect = 4e-23
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
D+WS+G ++Y LL G PF +ET I +YS P HI+ A LI +
Sbjct: 193 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQK 248
Query: 76 LLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLA 111
+L T RPT +LL +F IP + CL
Sbjct: 249 MLQTDPTARPTINELLNDEFFTSGYIPARLPITCLT 284
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 92.8 bits (231), Expect = 7e-23
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
D+WS+G ++Y LL G PF +ET I +YS P HI+ A LI +
Sbjct: 219 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQK 274
Query: 76 LLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCL 110
+L T RPT +LL +F IP + CL
Sbjct: 275 MLQTDPTARPTINELLNDEFFTSGYIPARLPITCL 309
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 92.0 bits (229), Expect = 1e-22
Identities = 40/117 (34%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 5 VLKLIDLGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH-------------- 49
V++ +S D+WSLGV+LYILLSG PF+ +
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFE 251
Query: 50 -ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNT 105
I Y FP + HIS A++LI +LL A +R +A Q+LQ W A P NT
Sbjct: 252 SIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA-PENT 307
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 92.9 bits (231), Expect = 1e-22
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRA----HISVADYSFPPEQCGHISVPARE 71
S DMWSLGV++YILL G PF I + Y FP + +S +
Sbjct: 241 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM 300
Query: 72 LIGQLLNTHADKRPTAGQLLQVAWFAE 98
LI LL T +R T + + W +
Sbjct: 301 LIRNLLKTEPTQRMTITEFMNHPWIMQ 327
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 88.4 bits (220), Expect = 1e-21
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
G +D+WSLG + Y LL G PF ++ + T + +ADY P +S+ A++LI Q
Sbjct: 190 GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPS----FLSIEAKDLIHQ 245
Query: 76 LLNTHADKRPTAGQLLQVAWFAEIAIP 102
LL + R + +L + + +
Sbjct: 246 LLRRNPADRLSLSSVLDHPFMSRNSST 272
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 85.9 bits (212), Expect = 4e-20
Identities = 14/89 (15%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQ-----CGHISVPAR 70
+ + W LG+ +Y + PF + + + + C + +
Sbjct: 271 THALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVK 330
Query: 71 ELIGQLLNTHADKRPTAGQLLQVAWFAEI 99
LIG+ LN +R + ++ F ++
Sbjct: 331 TLIGRFLNFDRRRRLLPLEAMETPEFLQL 359
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 83.8 bits (208), Expect = 7e-20
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
D+WSLGVL Y L G PF + +ET IS +++FP ++ AR+LI +
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISR 240
Query: 76 LLNTHADKRPTAGQLLQVAWF 96
LL + +RP ++L+ W
Sbjct: 241 LLKHNPSQRPMLREVLEHPWI 261
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 85.1 bits (210), Expect = 8e-20
Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 8/88 (9%)
Query: 12 GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
+ S D W+LG+++Y + P ++ I C +I P R
Sbjct: 287 RTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIF--------RSCKNIPQPVRA 338
Query: 72 LIGQLLNTHADKRPTAGQLLQVAWFAEI 99
L+ L + R Q ++ + ++
Sbjct: 339 LLEGFLRYPKEDRLLPLQAMETPEYEQL 366
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 83.4 bits (207), Expect = 9e-20
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
D+W GVL Y L G+ PF S ET I D FPP +S +++LI +
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKDLISK 245
Query: 76 LLNTHADKRPTAGQLLQVAWF 96
LL H +R +++ W
Sbjct: 246 LLRYHPPQRLPLKGVMEHPWV 266
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 82.4 bits (204), Expect = 3e-19
Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
DM+SLG++ + ++ + FPP+ + +++I
Sbjct: 209 NEKIDMYSLGIIFFEMIYP--FSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRL 266
Query: 76 LLNTHADKRPTAGQLLQVAWF 96
L++ +KRP A LL W
Sbjct: 267 LIDHDPNKRPGARTLLNSGWL 287
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 81.6 bits (201), Expect = 1e-18
Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 8/89 (8%)
Query: 12 GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
+ + D W+LG+ +Y + P D++ I C +I P R
Sbjct: 291 PTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIF--------RSCKNIPQPVRA 342
Query: 72 LIGQLLNTHADKRPTAGQLLQVAWFAEIA 100
L+ L + R Q ++ + ++
Sbjct: 343 LLEGFLRYPKEDRLLPLQAMETPEYEQLR 371
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 80.8 bits (200), Expect = 2e-18
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 15 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
GP D+WSLGV+LY L+SG PF ++ +E R + Y P ++S L+
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLK 246
Query: 75 QLLNTHADKRPTAGQLLQVAWF 96
+ L + KR T Q+++ W
Sbjct: 247 RFLVLNPIKRGTLEQIMKDRWI 268
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 79.3 bits (196), Expect = 6e-18
Identities = 32/125 (25%), Positives = 44/125 (35%), Gaps = 38/125 (30%)
Query: 6 LKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLSGVSP 37
LKLID GS A G S +WSLG+LLY ++ G P
Sbjct: 189 LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
Query: 38 FLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFA 97
F + E I F +S + LI L RPT ++ W
Sbjct: 249 FEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298
Query: 98 EIAIP 102
++ +P
Sbjct: 299 DVLLP 303
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 79.1 bits (195), Expect = 1e-17
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 16 GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCG---HISVPARE 71
S D++S+G + Y +LS G PF D+ E ++I +S +C + A +
Sbjct: 217 TRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATD 274
Query: 72 LIGQLLNTHADKRPTAGQLLQVAWF 96
LI Q+++ KRPTA ++L+ F
Sbjct: 275 LISQMIDHDPLKRPTAMKVLRHPLF 299
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 77.7 bits (192), Expect = 2e-17
Identities = 31/119 (26%), Positives = 42/119 (35%), Gaps = 38/119 (31%)
Query: 6 LKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLSGVSP 37
KLID GS A +WSLG+LLY ++ G P
Sbjct: 179 AKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIP 238
Query: 38 FLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF 96
F + E I A+ FP H+S LI + L RP+ ++L W
Sbjct: 239 FERDQE------ILEAELHFPA----HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWM 287
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 78.3 bits (193), Expect = 2e-17
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 10 DLGSSAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVP 68
D + + D++S G + Y ++S G PF + + + + H V
Sbjct: 201 DCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPE-KHEDVI 259
Query: 69 ARELIGQLLNTHADKRPTAGQLLQVAWF 96
ARELI +++ KRP+A +L+ +F
Sbjct: 260 ARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 76.9 bits (190), Expect = 2e-17
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 15 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
AGP D+WS GV+LY LL G PF DE I + P +++ L+
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----YLNRSVATLLM 243
Query: 75 QLLNTHADKRPTAGQLLQVAWF 96
+L KR T + + WF
Sbjct: 244 HMLQVDPLKRATIKDIREHEWF 265
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 76.1 bits (188), Expect = 4e-17
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 15 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
AGP D+WS GV+LY++L PF DES +IS Y+ P +S A LI
Sbjct: 189 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIK 244
Query: 75 QLLNTHADKRPTAGQLLQVAWF 96
++L + R + +++Q WF
Sbjct: 245 RMLIVNPLNRISIHEIMQDDWF 266
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 75.9 bits (187), Expect = 8e-17
Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 5/99 (5%)
Query: 8 LIDL--GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEE-ETRAHISVADYSFPPEQCGH 64
L + TD+WSLG +LY ++ G P+ ++ ++ A S P
Sbjct: 214 LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSP--R 271
Query: 65 ISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPN 103
S +L+ ++ +RP LL + P
Sbjct: 272 HSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 75.4 bits (186), Expect = 1e-16
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 15 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
AGP D+WS G++LY++L G PF DE ++ Y P +S A+ LI
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPD----FLSPGAQSLIR 240
Query: 75 QLLNTHADKRPTAGQLLQVAWF 96
+++ +R T ++ + WF
Sbjct: 241 RMIVADPMQRITIQEIRRDPWF 262
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 75.5 bits (186), Expect = 1e-16
Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 16/113 (14%)
Query: 12 GSSAGPSTDMWSLGVLLYILLSGVSPFLDE-SEEETRAHISVADYSFPPEQCG------- 63
S G D+WSLG+ LY++ V PF + S E +I + +P ++
Sbjct: 226 SSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTN 285
Query: 64 --------HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVN 108
+S + + L + +R T+ L+ W A+ I + + +
Sbjct: 286 KKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREFS 338
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 75.0 bits (185), Expect = 2e-16
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 15 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
+G D+WS GV LY + +G+ PF ++ + +I Y+ P P +L+
Sbjct: 190 SGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPG----DCGPPLSDLLK 245
Query: 75 QLLNTHADKRPTAGQLLQVAWF 96
+L KR + Q+ Q +WF
Sbjct: 246 GMLEYEPAKRFSIRQIRQHSWF 267
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 75.6 bits (186), Expect = 2e-16
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 15 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
AGP D+WS GV+LY LL G PF D+ I + P +++ L+
Sbjct: 193 AGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQ----YLNPSVISLLK 248
Query: 75 QLLNTHADKRPTAGQLLQVAWF 96
+L KR T + + WF
Sbjct: 249 HMLQVDPMKRATIKDIREHEWF 270
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 74.4 bits (183), Expect = 4e-16
Identities = 31/120 (25%), Positives = 43/120 (35%), Gaps = 39/120 (32%)
Query: 6 LKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVS 36
+KLID GS+A GP +MWSLGV LY L+ +
Sbjct: 169 IKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEEN 228
Query: 37 PFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF 96
PF + E A P +S L+ LL ++R T +L+ W
Sbjct: 229 PFCELEE------TVEAAIHPPY----LVSKELMSLVSGLLQPVPERRTTLEKLVTDPWV 278
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 74.3 bits (183), Expect = 4e-16
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Query: 15 AGPSTDMWSLGVLLYILLSGVSPFLDESEEE----TRAHISVADYSFPPEQCGHISVPAR 70
G D+WS GV LY++L G PF D E T I YS P + IS
Sbjct: 195 DGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDI--RISPECC 252
Query: 71 ELIGQLLNTHADKRPTAGQLLQVAWF 96
LI ++ R + ++ +WF
Sbjct: 253 HLISRIFVADPATRISIPEIKTHSWF 278
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 72.1 bits (177), Expect = 3e-15
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 8 LIDLGSSA--GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 65
+IDL S+ G D+W+LG +LY+L PF E+ + I YS PP
Sbjct: 221 IIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF----EDGAKLRIVNGKYSIPPHD--TQ 274
Query: 66 SVPARELIGQLLNTHADKRPTAGQLLQVAW 95
LI +L + ++R + +++
Sbjct: 275 YTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 71.1 bits (175), Expect = 3e-15
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
+D+WSLG LLY L + + PF S++E I + P S E+I +
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPY---RYSDELNEIITR 250
Query: 76 LLNTHADKRPTAGQLLQVAWFAE 98
+LN RP+ ++L+ E
Sbjct: 251 MLNLKDYHRPSVEEILENPLILE 273
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 71.1 bits (175), Expect = 4e-15
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 15 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
+G + D+W++GV LY + G PF+DE + I FP + I+ ++LI
Sbjct: 217 SGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQP--DIAEDLKDLIT 274
Query: 75 QLLNTHADKRPTAGQLLQVAWF 96
++L+ + + R ++ W
Sbjct: 275 RMLDKNPESRIVVPEIKLHPWV 296
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 69.6 bits (171), Expect = 2e-14
Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 5/93 (5%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEE-ETRAHISVADYSFP-PEQCGHISVPARELI 73
P +D+WSLG +LY + G +PF + I ++ P+ ++++
Sbjct: 217 SPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD---IPEKDLQDVL 273
Query: 74 GQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTK 106
L +R + +LL + P N
Sbjct: 274 KCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 306
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 68.8 bits (169), Expect = 2e-14
Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 3/83 (3%)
Query: 15 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR-AHISVADYSFPPEQCGHISVPARELI 73
D+WS G++L +L+G P+ S+ + P + I L+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK--KIDSAPLALL 242
Query: 74 GQLLNTHADKRPTAGQLLQVAWF 96
++L + R T + + W+
Sbjct: 243 HKILVENPSARITIPDIKKDRWY 265
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 69.0 bits (169), Expect = 3e-14
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 5/95 (5%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETR-AHISVADYSFP-PEQCGHISVPARELI 73
P +D+WSLG +LY + G +PF + ++ I ++ P+ ++++
Sbjct: 198 SPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD---IPEKDLQDVL 254
Query: 74 GQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVN 108
L +R + +LL + P N
Sbjct: 255 KCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAK 289
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 69.1 bits (169), Expect = 4e-14
Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH-ISVADYSFP-PEQCGHISVPARELI 73
P +D+WSLG +LY + G +PF + ++ H I ++ P+ ++++
Sbjct: 245 SPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD---IPEKDLQDVL 301
Query: 74 GQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVN 108
L +R + +LL + P N
Sbjct: 302 KCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAK 336
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 68.2 bits (167), Expect = 4e-14
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 19 TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
D++SLG++L+ LL PF + E V + FPP ++ +L+
Sbjct: 211 VDIFSLGLILFELLY---PFSTQMERVRTLTD-VRNLKFPPLFT-QKYPCEYVMVQDMLS 265
Query: 79 THADKRPTAGQLLQVAWFAEIAIPNNTKVN 108
+RP A +++ A F ++ P T +
Sbjct: 266 PSPMERPEAINIIENAVFEDLDFPGKTVLR 295
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 68.0 bits (167), Expect = 5e-14
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 11 LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
SA S+D+W+LG ++Y L++G+ PF +E I +Y FP AR
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----KFFPKAR 260
Query: 71 ELIGQLLNTHADKRPTAGQLLQVA------WFAEI 99
+L+ +LL A KR ++ +F +
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 68.1 bits (167), Expect = 6e-14
Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 15 AGPSTDMWSLGVLLYILLSGVSPFLDESEE-ETRAHISVADYSFPPEQCGHISVPARELI 73
D+WS G++L +L+G P+ S+ + + P + I L+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK--KIDSAPLALL 242
Query: 74 GQLLNTHADKRPTAGQLLQVAWF 96
++L + R T + + W+
Sbjct: 243 HKILVENPSARITIPDIKKDRWY 265
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 65.8 bits (161), Expect = 3e-13
Identities = 23/84 (27%), Positives = 36/84 (42%)
Query: 12 GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
+ +D+WSLG LLY + + SPF + + +PP H S R+
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQ 269
Query: 72 LIGQLLNTHADKRPTAGQLLQVAW 95
L+ +N +KRP + VA
Sbjct: 270 LVNMCINPDPEKRPDVTYVYDVAK 293
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 66.2 bits (161), Expect = 4e-13
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 9 IDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVP 68
I G S D W+ GVLLY +L+G +PF E E+E I + ++P +S
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKE 568
Query: 69 ARELIGQLLNTHADKR 84
A + L+ H KR
Sbjct: 569 AVAICKGLMTKHPGKR 584
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 65.5 bits (160), Expect = 5e-13
Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Query: 12 GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
+D+W+LG +LY L + F S + I + H S R
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSL---HYSYDLRS 255
Query: 72 LIGQLLNTHADKRPTAGQLLQVAWFAE 98
L+ QL + RP+ +L+ + A+
Sbjct: 256 LVSQLFKRNPRDRPSVNSILEKGFIAK 282
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 65.3 bits (160), Expect = 7e-13
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 9 IDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVP 68
I LG S D WS GVLLY +L G SPF + EEE I + + +P +
Sbjct: 189 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR----WLEKE 244
Query: 69 ARELIGQLLNTHADKRPTAGQLLQV-AWFAEI 99
A++L+ +L +KR ++ F EI
Sbjct: 245 AKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 64.2 bits (157), Expect = 1e-12
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 9 IDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVP 68
I G S D W+ GVLLY +L+G +PF E E+E I + ++P +S
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKE 247
Query: 69 ARELIGQLLNTHADKR 84
A + L+ H KR
Sbjct: 248 AVAICKGLMTKHPGKR 263
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 63.6 bits (155), Expect = 3e-12
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 5/88 (5%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIG 74
GP D W+LGV Y + G +PF +S ET I P + AR+ I
Sbjct: 248 GPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQ 307
Query: 75 QLLNTHADKRPTAGQLLQV---AWFAEI 99
+LL + R G +F +
Sbjct: 308 RLL-CPPETRLGRGGAGDFRTHPFFFGL 334
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 63.2 bits (154), Expect = 4e-12
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIG 74
GP D WSLGV +Y +L G +PF ES ET I F P Q +S A++LI
Sbjct: 259 GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIR 318
Query: 75 QLLNTHADKRPTAGQLLQV---AWFAEI 99
+L+ + R + +F+ I
Sbjct: 319 RLI-CSREHRLGQNGIEDFKKHPFFSGI 345
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 63.0 bits (154), Expect = 4e-12
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
GP+ D W++GVLLY +L G +PF E+E++ I + +P + A ++
Sbjct: 202 GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT----WLHEDATGILKS 257
Query: 76 LLNTHADKR 84
+ + R
Sbjct: 258 FMTKNPTMR 266
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 62.2 bits (152), Expect = 6e-12
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
S D WS GVL++ +L+G PF + +ET I A P +S A+ L+
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLRM 259
Query: 76 LLNTHADKR 84
L + R
Sbjct: 260 LFKRNPANR 268
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 62.2 bits (152), Expect = 6e-12
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
+ D WSLG L+Y +L+G PF E+ ++T I + PP +++ AR+L+ +
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP----YLTQEARDLLKK 254
Query: 76 LLNTHADKR 84
LL +A R
Sbjct: 255 LLKRNAASR 263
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 61.9 bits (151), Expect = 9e-12
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
G + D W LGV++Y ++ G PF ++ E I + + FP +S A+ L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAG 238
Query: 76 LLNTHADKR 84
LL +R
Sbjct: 239 LLKKDPKQR 247
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 62.0 bits (151), Expect = 9e-12
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Query: 16 GPSTDMWSLGVLLYILLSGVS-PFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
G + D++SLG+ + + + P E ++ R PPE +S R ++
Sbjct: 233 GTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY------LPPEFTAGLSSELRSVLV 286
Query: 75 QLLNTHADKRPTAGQLLQVAWFAE 98
+L R TA LL + +
Sbjct: 287 MMLEPDPKLRATAEALLALPVLRQ 310
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 61.8 bits (151), Expect = 9e-12
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
S D WS G+L+Y +L+G +PF D + +T I A+ FPP + ++L+ +
Sbjct: 181 NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP----FFNEDVKDLLSR 236
Query: 76 LLNTHADKR-----PTAGQLLQVAWFAEI 99
L+ +R + WF E+
Sbjct: 237 LITRDLSQRLGNLQNGTEDVKNHPWFKEV 265
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 61.5 bits (150), Expect = 1e-11
Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 8/83 (9%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
G D+++LG++L LL + S+ T + D + L+ +
Sbjct: 199 GKEVDLYALGLILAELLHVCDTAFETSKFFTD----LRDGIISD----IFDKKEKTLLQK 250
Query: 76 LLNTHADKRPTAGQLLQVAWFAE 98
LL+ + RP ++L+ +
Sbjct: 251 LLSKKPEDRPNTSEILRTLTVWK 273
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 62.1 bits (151), Expect = 1e-11
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
G + D W LGV++Y ++ G PF ++ E+ I + + FP + A+ L+
Sbjct: 327 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSG 382
Query: 76 LLNTHADKR 84
LL +R
Sbjct: 383 LLKKDPKQR 391
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 61.1 bits (149), Expect = 2e-11
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
+ D W LG +LY +L G+ PF + E +I P +I+ AR L+
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKP----NITNSARHLLEG 272
Query: 76 LLNTHADKR 84
LL KR
Sbjct: 273 LLQKDRTKR 281
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 61.2 bits (149), Expect = 2e-11
Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 8/88 (9%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPF---LDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
+ D WSLGV Y LL G P+ S +E ++P S L
Sbjct: 195 SFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPS----AWSQEMVSL 250
Query: 73 IGQLLNTHADKR-PTAGQLLQVAWFAEI 99
+ +LL + D+R + + +I
Sbjct: 251 LKKLLEPNPDQRFSQLSDVQNFPYMNDI 278
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 60.2 bits (146), Expect = 3e-11
Identities = 16/106 (15%), Positives = 28/106 (26%), Gaps = 25/106 (23%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI---------------------SVAD 54
G + D+WS+GV Y +G PF + D
Sbjct: 201 GATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPID 260
Query: 55 YSFPPEQCGHISVPARE----LIGQLLNTHADKRPTAGQLLQVAWF 96
+S +S + ++ +L +K Q
Sbjct: 261 WSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 60.0 bits (146), Expect = 4e-11
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
+ D W+LGVL+Y + +G PF + + I FP H S ++L+
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRN 271
Query: 76 LLNTHADKR 84
LL KR
Sbjct: 272 LLQVDLTKR 280
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 60.1 bits (145), Expect = 5e-11
Identities = 17/112 (15%), Positives = 32/112 (28%), Gaps = 20/112 (17%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR----- 70
+ D WS G L + ++G PFL + + ++ +
Sbjct: 201 TVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVL 260
Query: 71 ---------------ELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKV 107
+ +L H +R T Q V F + + K+
Sbjct: 261 PTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLKL 312
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 59.5 bits (144), Expect = 5e-11
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 20 DMWSLGVLLYILLSGVSPFLDESEEETRAHI--SVADYSFPPEQCGHISVPARELIGQLL 77
D++SLG++L+ LL F + E R I V + FP ++ +L
Sbjct: 258 DIFSLGLILFELLY---SFSTQME---RVRIITDVRNLKFPLL-FTQKYPQEHMMVQDML 310
Query: 78 NTHADKRPTAGQLLQVAWFAEI 99
+ +RP A +++ A F +
Sbjct: 311 SPSPTERPEATDIIENAIFENL 332
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 58.2 bits (141), Expect = 2e-10
Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 5 VLKLIDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI--SVADYSFPPEQC 62
VLK G D WS+GV LY +L G +PF +S T + I +FP +
Sbjct: 240 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDN- 298
Query: 63 GHISVPARELIGQLLNTHADKRPTAGQLLQV---AWFAEI 99
IS A+ LI L T + R + ++ +F
Sbjct: 299 -DISKEAKNLICAFL-TDREVRLGRNGVEEIKRHLFFKND 336
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 57.9 bits (140), Expect = 3e-10
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
S D W+LG LLY +++G SPF ++ R + P E S AR L Q
Sbjct: 363 TFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQ 422
Query: 76 LLNTHADKR-----PTAGQLLQVAWFAEI 99
LL +R +A ++ + F ++
Sbjct: 423 LLCKDPAERLGCRGGSAREVKEHPLFKKL 451
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 57.4 bits (139), Expect = 4e-10
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 13/85 (15%)
Query: 9 IDLGSSAGPSTDMWSLGVLLYILLSGVSPFL---------DESEEETRAHISVADYSFPP 59
I G G S D W+LGVL++ +++G SPF +E+ I P
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 283
Query: 60 EQCGHISVPARELIGQLLNTHADKR 84
+SV A ++ LN +R
Sbjct: 284 ----SLSVKAASVLKSFLNKDPKER 304
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 56.9 bits (138), Expect = 4e-10
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 13/78 (16%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFL---------DESEEETRAHISVADYSFPPEQCGHIS 66
G S D W+LGVL++ +++G SPF +E+ I P +S
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLS 243
Query: 67 VPARELIGQLLNTHADKR 84
V A ++ LN +R
Sbjct: 244 VKAASVLKSFLNKDPKER 261
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 56.9 bits (138), Expect = 6e-10
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 13/93 (13%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH----ISVADYSFPPEQCGHISVPARE 71
+ D WSLGVL+Y LL+G SPF + E+ ++A I ++ +P +S A++
Sbjct: 240 DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ----EMSALAKD 295
Query: 72 LIGQLLNTHADKR----PT-AGQLLQVAWFAEI 99
LI +LL KR P A ++ + +F +I
Sbjct: 296 LIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 55.7 bits (134), Expect = 2e-09
Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 7/80 (8%)
Query: 8 LIDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESE---EETRAHISVADYSFPPEQCGH 64
++ G + S D +SLG +L+ LL G SPF E P
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD----S 416
Query: 65 ISVPARELIGQLLNTHADKR 84
S R L+ LL ++R
Sbjct: 417 FSPELRSLLEGLLQRDVNRR 436
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 55.2 bits (133), Expect = 3e-09
Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Query: 11 LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH----ISVADYSFPPEQCGHIS 66
LG S D ++LGV LY +++ PF E+ + ++P S
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD----KFS 417
Query: 67 VPARELIGQLLNTHADKR 84
+++ LL +KR
Sbjct: 418 PASKDFCEALLQKDPEKR 435
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 54.9 bits (132), Expect = 3e-09
Identities = 18/126 (14%), Positives = 34/126 (26%), Gaps = 29/126 (23%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI---------------------SVAD 54
G + D+WS+GV Y +G PF + D
Sbjct: 201 GATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPID 260
Query: 55 YSFPPEQCGHISVPARE----LIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCL 110
+S +S + ++ +L +K Q I + ++
Sbjct: 261 WSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD----ILHRMVIHVF 316
Query: 111 AWHQNQ 116
+ Q
Sbjct: 317 SLQQMT 322
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 48.6 bits (116), Expect = 3e-07
Identities = 17/92 (18%), Positives = 26/92 (28%), Gaps = 8/92 (8%)
Query: 2 NGAVLKLIDLG--SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEET--RAHISVADYSF 57
+G V L A P D+ +G LY LL P + A A
Sbjct: 165 DGDV-VLAYPATMPDANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPI 223
Query: 58 PPEQCGHISVPA--RELIGQLLNTHADKRPTA 87
P +P + + + R +
Sbjct: 224 EPADIDR-DIPFQISAVAARSVQGDGGIRSAS 254
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 48.5 bits (116), Expect = 3e-07
Identities = 12/77 (15%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
P D+++L + + + I P+ +S EL+
Sbjct: 209 LPKADIFALALTVVCAAGAEPLP---RNGDQWHEIRQGRLPRIPQ---VLSQEFTELLKV 262
Query: 76 LLNTHADKRPTAGQLLQ 92
+++ ++RP+A L++
Sbjct: 263 MIHPDPERRPSAMALVK 279
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller;
3.30A {Saccharomyces cerevisiae}
Length = 416
Score = 47.7 bits (114), Expect = 7e-07
Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 15/108 (13%)
Query: 100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH 159
++ ++K N L W N IA D+G L++ + + + H
Sbjct: 63 SLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSM----------ARFSNH 112
Query: 160 SGKVRAIIWNEQYEKL---TSSDETGLIIVWMLYKEKNPQDKLPPLML 204
S V+ + +N + + + ++ I +W + K PL
Sbjct: 113 SSSVKTVKFNAKQDNVLASGGNNGE--IFIWDMNKCTESPSNYTPLTP 158
Score = 40.4 bits (95), Expect = 2e-04
Identities = 14/83 (16%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 107 VNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
V + ++ Q +A GG++G + + ++ ES +N +V +
Sbjct: 116 VKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTES-----PSNYTPLTPGQSMSSVDEVIS 170
Query: 166 IIWNEQYEK-LTSSDETGLIIVW 187
+ WN+ S+ + +W
Sbjct: 171 LAWNQSLAHVFASAGSSNFASIW 193
Score = 38.9 bits (91), Expect = 6e-04
Identities = 17/86 (19%), Positives = 30/86 (34%), Gaps = 13/86 (15%)
Query: 107 VNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
V LAW+Q+ A G + L KE +L+ G ++
Sbjct: 168 VISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVI--------HLSYTSPNSGIKQQLSV 219
Query: 166 IIWN--EQYEKLTSS--DETGLIIVW 187
+ W+ T++ D I++W
Sbjct: 220 VEWHPKNSTRVATATGSDNDPSILIW 245
Score = 32.3 bits (74), Expect = 0.100
Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 17/86 (19%)
Query: 107 VNCLAWH-QNQGWIAVGGDDGLLKVLKL-DTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
++ + WH +N +A + + D N N + QGH +
Sbjct: 217 LSVVEWHPKNSTRVATATGSDNDPSILIWD----------LRNANTPLQTLNQGHQKGIL 266
Query: 165 AIIWNEQYEKL---TSSDETGLIIVW 187
++ W Q E L + D T +++W
Sbjct: 267 SLDWCHQDEHLLLSSGRDNT--VLLW 290
Score = 31.5 bits (72), Expect = 0.17
Identities = 7/83 (8%), Positives = 23/83 (27%), Gaps = 16/83 (19%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSG--KVR 164
++ + A D L++ L + + K
Sbjct: 26 PLLVSGTVSGTVDANFSTDSSLELWSLLAADSE--------------KPIASLQVDSKFN 71
Query: 165 AIIWNEQYEKLTSSDETGLIIVW 187
+ W+ + + + + G + ++
Sbjct: 72 DLDWSHNNKIIAGALDNGSLELY 94
Score = 30.0 bits (68), Expect = 0.47
Identities = 9/85 (10%), Positives = 19/85 (22%), Gaps = 20/85 (23%)
Query: 107 VNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
+ L W + G D + + ++ ++
Sbjct: 265 ILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ--------------LSQFPARGNWCFK 310
Query: 166 IIWNEQYEKLT---SSDETGLIIVW 187
+ + L S D I V
Sbjct: 311 TKFAPEAPDLFACASFDNK--IEVQ 333
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase,
spliceosome, DNA damage, D repair, mRNA processing,
nucleus; 2.60A {Saccharomyces cerevisiae}
Length = 343
Score = 47.1 bits (111), Expect = 1e-06
Identities = 14/101 (13%), Positives = 38/101 (37%), Gaps = 15/101 (14%)
Query: 101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHS 160
++ + + H++ +A+ DG+L V L + + A ++
Sbjct: 167 AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ------------ASSRFPVDEE 214
Query: 161 GKVRAIIWNEQ-YEKLTSSDETGLIIVWMLYKEKNPQDKLP 200
K++ + + + Y + D+T ++ + L K+
Sbjct: 215 AKIKEVKFADNGYWMVVECDQT--VVCFDLRKDVGTLAYPT 253
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 45.5 bits (108), Expect = 4e-06
Identities = 15/88 (17%), Positives = 29/88 (32%), Gaps = 5/88 (5%)
Query: 12 GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRA--HISVADYSFPPEQCGHISVPA 69
G D+WS ++ +L+G P+ I ++ E +
Sbjct: 230 GKPCDAKVDIWSSCCMMLHMLNGCHPWTQY--FRGPLCLKI-ASEPPPIREIPPSCAPLT 286
Query: 70 RELIGQLLNTHADKRPTAGQLLQVAWFA 97
+ I + L R +A +L + A
Sbjct: 287 AQAIQEGLRKEPVHRASAMELRRKVGKA 314
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 45.0 bits (107), Expect = 5e-06
Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 28/124 (22%)
Query: 1 MNGAVLKLIDLGSSA--------------------------GPSTDMWSLGVLLYILLSG 34
G+V K+ DLG + S D+++ G+ + + +
Sbjct: 167 PTGSV-KIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATS 225
Query: 35 VSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVA 94
P+ + V P +E+I + + D+R + LL A
Sbjct: 226 EYPYSECQNAAQIYRR-VTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHA 284
Query: 95 WFAE 98
+F E
Sbjct: 285 FFQE 288
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor,
phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila
melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A*
3gfc_A 3cfs_B 3cfv_B
Length = 430
Score = 45.1 bits (107), Expect = 5e-06
Identities = 19/85 (22%), Positives = 28/85 (32%), Gaps = 6/85 (7%)
Query: 107 VNCLAWHQNQGWI-AVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
+ + W + I A G D L V L E A + + GH+ K+
Sbjct: 324 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 383
Query: 166 IIWNEQYEKL---TSSDETGLIIVW 187
WN + S D + VW
Sbjct: 384 FSWNPNEPWIICSVSEDNI--MQVW 406
Score = 43.2 bits (102), Expect = 3e-05
Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 19/94 (20%)
Query: 107 VNCLAWHQNQGWI-AVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
VNCL+++ +I A G D + + L K S + H ++
Sbjct: 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL-------------HSFESHKDEIFQ 326
Query: 166 IIWNEQYEKL---TSSDETGLIIVWMLYKEKNPQ 196
+ W+ E + + +D + VW L K Q
Sbjct: 327 VQWSPHNETILASSGTDRR--LHVWDLSKIGEEQ 358
Score = 41.3 bits (97), Expect = 9e-05
Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 15/84 (17%)
Query: 107 VNCLAWHQNQGWI-AVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
V +AWH + DD L + DT +T + + ++ H+ +V
Sbjct: 234 VEDVAWHLLHESLFGSVADDQKLMIW--DTRNNNTSKPS---------HTVDAHTAEVNC 282
Query: 166 IIWNEQYEKL--TSSDETGLIIVW 187
+ +N E + T S + + +W
Sbjct: 283 LSFNPYSEFILATGSAD-KTVALW 305
Score = 40.5 bits (95), Expect = 2e-04
Identities = 20/92 (21%), Positives = 31/92 (33%), Gaps = 6/92 (6%)
Query: 98 EIAIPNNTKVNCLAWH-QNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL 156
EI I + +VN + QN IA + V +L L
Sbjct: 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDL----RL 177
Query: 157 QGHSGKVRAIIWNEQYEK-LTSSDETGLIIVW 187
+GH + + WN L S+ + I +W
Sbjct: 178 RGHQKEGYGLSWNPNLNGYLLSASDDHTICLW 209
Score = 35.9 bits (83), Expect = 0.007
Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 13/85 (15%)
Query: 107 VNCLAW-HQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
L+W G++ DD + + ++ + + A GH+ V
Sbjct: 184 GYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDA-------KNIFTGHTAVVED 236
Query: 166 IIWNEQYEKL---TSSDETGLIIVW 187
+ W+ +E L + D+ +++W
Sbjct: 237 VAWHLLHESLFGSVADDQK--LMIW 259
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 44.6 bits (106), Expect = 6e-06
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Query: 12 GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
G + D+WSLG + + +G PF E E A V + PE +S A+
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKPPF-YELGEPQAAMFKVGMFKVHPEIPESMSAEAKA 257
Query: 72 LIGQLLNTHADKRPTAGQLLQVAW 95
I + DKR A LL +
Sbjct: 258 FILKCFEPDPDKRACANDLLVDEF 281
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis
complex; 2.40A {Saccharomyces cerevisiae}
Length = 902
Score = 44.5 bits (104), Expect = 1e-05
Identities = 10/83 (12%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 105 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
K+ + + W+ +G +G + V +D + S+ ++ + + +
Sbjct: 99 GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKL---DNLQKSSFFPAARLSPIV 155
Query: 165 AIIWNEQYEKLTSSDETGLIIVW 187
+I WN + + + +
Sbjct: 156 SIQWNPRDIGTVLISYEYVTLTY 178
Score = 35.6 bits (81), Expect = 0.010
Identities = 16/125 (12%), Positives = 39/125 (31%), Gaps = 25/125 (20%)
Query: 104 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGK---ESTGQVAAANVNLAMNQSL---- 156
++K A+ Q +A+ G + + + + + A + L
Sbjct: 17 SSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVKGIYLVVIN 76
Query: 157 ------------------QGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEKNPQDK 198
GK+ +I + + + + G +IV+ + +++ K
Sbjct: 77 AKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFK 136
Query: 199 LPPLM 203
L L
Sbjct: 137 LDNLQ 141
Score = 34.1 bits (77), Expect = 0.031
Identities = 7/96 (7%), Positives = 26/96 (27%), Gaps = 4/96 (4%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKE----STGQVAAANVNLAMNQSLQGHSGK 162
+ + W+ + + + L + A ++ + + K
Sbjct: 154 IVSIQWNPRDIGTVLISYEYVTLTYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPK 213
Query: 163 VRAIIWNEQYEKLTSSDETGLIIVWMLYKEKNPQDK 198
V +++ + + E ++ W +
Sbjct: 214 VIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMAR 249
Score = 33.7 bits (76), Expect = 0.035
Identities = 11/62 (17%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKE-STGQVAAANVNLAMNQSLQGHSGKVRA 165
V +H N I +D L ++G V +N+ ++ S
Sbjct: 214 VIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAK 273
Query: 166 II 167
I
Sbjct: 274 IS 275
Score = 29.8 bits (66), Expect = 0.60
Identities = 9/72 (12%), Positives = 26/72 (36%)
Query: 90 LLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVN 149
+V + V+ +++ +AV + G + + K + + + + + +
Sbjct: 474 SFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGD 533
Query: 150 LAMNQSLQGHSG 161
L MN +
Sbjct: 534 LEMNFRRFSLNN 545
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 43.8 bits (103), Expect = 2e-05
Identities = 10/77 (12%), Positives = 19/77 (24%), Gaps = 8/77 (10%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
D + + +Y +L G + E + E
Sbjct: 263 NYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHLDMW--------NEFFHV 314
Query: 76 LLNTHADKRPTAGQLLQ 92
+LN + LL+
Sbjct: 315 MLNIPDCHHLPSLDLLR 331
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY
crystallography, beta-propeller, structure, mRNA export,
NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens}
PDB: 3fmo_A* 3fmp_A* 3fhc_A
Length = 434
Score = 43.0 bits (100), Expect = 3e-05
Identities = 20/134 (14%), Positives = 38/134 (28%), Gaps = 8/134 (5%)
Query: 73 IGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAV----GGDDGLL 128
I N +P V + +P ++ LA + ++ ++
Sbjct: 61 IFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSII 120
Query: 129 KVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEK-LTSSDETGLIIVW 187
+ T Q A ++ L+ G V + WN + G I V
Sbjct: 121 AFFDVRTFSNEAKQQKR---PFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVL 177
Query: 188 MLYKEKNPQDKLPP 201
+ + LP
Sbjct: 178 QVTETVKVCATLPS 191
Score = 35.7 bits (81), Expect = 0.008
Identities = 11/73 (15%), Positives = 22/73 (30%), Gaps = 8/73 (10%)
Query: 101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHS 160
+P+ V + W +AVG +G + ++ H
Sbjct: 189 LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKV--------IPCPPFYESDHP 240
Query: 161 GKVRAIIWNEQYE 173
+V ++W Y
Sbjct: 241 VRVLDVLWIGTYV 253
Score = 34.1 bits (77), Expect = 0.024
Identities = 14/101 (13%), Positives = 36/101 (35%), Gaps = 15/101 (14%)
Query: 103 NNTKVNCLAWH-QNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSG 161
V + W+ +AV DG + VL++ + + +
Sbjct: 148 AGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKV--------------CATLPSTV 193
Query: 162 KVRAIIWNEQYEKLTSSDETGLIIVWMLYKEKNPQDKLPPL 202
V ++ W+ + ++L + G ++ ++ ++ PP
Sbjct: 194 AVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPF 234
Score = 32.2 bits (72), Expect = 0.10
Identities = 17/104 (16%), Positives = 30/104 (28%), Gaps = 6/104 (5%)
Query: 89 QLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANV 148
L +V F + + LA G + GG G L++ N
Sbjct: 21 ALKKVRIFDSPEELPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNK 79
Query: 149 NLAMNQSLQ-GHSGKVRAIIWNEQYEKL----TSSDETGLIIVW 187
+ Q L + + + L SS+ +I +
Sbjct: 80 IVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFF 123
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX,
D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Length = 401
Score = 43.0 bits (102), Expect = 3e-05
Identities = 15/81 (18%), Positives = 34/81 (41%), Gaps = 16/81 (19%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V + W + +++VG +GL+ + +++ + +++ GH +V +
Sbjct: 137 VASVKWSHDGSFLSVGLGNGLVDIYDVESQTK--------------LRTMAGHQARVGCL 182
Query: 167 IWNEQYEKLTSSDETGLIIVW 187
WN L+S +G I
Sbjct: 183 SWNRHV--LSSGSRSGAIHHH 201
Score = 35.7 bits (83), Expect = 0.006
Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 14/62 (22%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V LAW + +A GG+D ++++ + + H+ V+A+
Sbjct: 220 VCGLAWRSDGLQLASGGNDNVVQIWDARSSIPK--------------FTKTNHNAAVKAV 265
Query: 167 IW 168
W
Sbjct: 266 AW 267
Score = 29.9 bits (68), Expect = 0.61
Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 15/63 (23%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V CL+W N+ ++ G G + + +LQGHS +V +
Sbjct: 179 VGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQI-------------GTLQGHSSEVCGL 223
Query: 167 IWN 169
W
Sbjct: 224 AWR 226
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 42.7 bits (100), Expect = 5e-05
Identities = 32/165 (19%), Positives = 58/165 (35%), Gaps = 50/165 (30%)
Query: 30 ILLSGVSPFLDESEEETRAH-ISVADYSFPPEQCGHISV-------------PARELIGQ 75
+ L + F E+ ++ + AD +F GH S+ L+ +
Sbjct: 1736 LTLMEKAAF-----EDLKSKGLIPADATF----AGH-SLGEYAALASLADVMSIESLV-E 1784
Query: 76 LLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 135
++ R G +QVA + +A N G +A L+ +
Sbjct: 1785 VVF----YR---GMTMQVA--VPRDELGRSNYGMIA--INPGRVAASFSQEALQYVVERV 1833
Query: 136 GKESTGQVAAANVNLAMNQSLQGH---SGKVRAIIWNEQYEKLTS 177
GK + V N N+ NQ Q +G +RA+ + +T+
Sbjct: 1834 GKRTGWLVEIVNYNVE-NQ--Q--YVAAGDLRAL------DTVTN 1867
Score = 39.6 bits (92), Expect = 5e-04
Identities = 30/185 (16%), Positives = 61/185 (32%), Gaps = 54/185 (29%)
Query: 36 SPFL---DESEEETRAHISVADYSFPPEQCGHISV-----------PARELIGQLLNTHA 81
SP L + ++E+ + +++ + P + IS+ P + L G LN
Sbjct: 336 SPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYG--LNLTL 393
Query: 82 DKRPTAGQLLQ------------VAWFAEIAIPNNTK-----VNCLAWHQNQGWIAVGGD 124
K L Q F +A P ++ + + + ++
Sbjct: 394 RKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAK 453
Query: 125 DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAII-----WNEQYEKLTSSD 179
D +++ DT S +V + +++ + V II W E T
Sbjct: 454 D--IQIPVYDTFDGSDLRVLSGSISERI----------VDCIIRLPVKW----ETTTQFK 497
Query: 180 ETGLI 184
T ++
Sbjct: 498 ATHIL 502
Score = 35.0 bits (80), Expect = 0.013
Identities = 33/214 (15%), Positives = 59/214 (27%), Gaps = 101/214 (47%)
Query: 8 LIDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY--SFPPEQCGHI 65
L +L + + +++ G+ + L S D+ DY S P I
Sbjct: 195 LSELIRTTLDAEKVFTQGLNILEWLENPSNTPDK------------DYLLSIP------I 236
Query: 66 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDD 125
S P LIG ++Q+A + V
Sbjct: 237 SCP---LIG---------------VIQLAHYV---------VTA---------------- 253
Query: 126 GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAII----------WNEQYEKL 175
K+L G+ + L+G +G + ++ W + +
Sbjct: 254 ---KLLGFTPGE--------------LRSYLKGATGHSQGLVTAVAIAETDSWESFFVSV 296
Query: 176 TSSDETGLIIVWMLY-----KEKNPQDKLPPLML 204
I + + E P LPP +L
Sbjct: 297 RK------AITVLFFIGVRCYEAYPNTSLPPSIL 324
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 41.8 bits (99), Expect = 5e-05
Identities = 22/112 (19%), Positives = 40/112 (35%), Gaps = 23/112 (20%)
Query: 11 LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVAD 54
L S+ DMWS+G + + F SE + I S+
Sbjct: 192 LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPR 251
Query: 55 YSFPP-------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI 99
+FPP + +L+ ++L + KR +A + LQ ++ +
Sbjct: 252 GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 303
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport
protein; 2.50A {Saccharomyces cerevisiae}
Length = 814
Score = 41.6 bits (98), Expect = 8e-05
Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 18/83 (21%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V + + WI VG DD ++V +TG++ + H +R+I
Sbjct: 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK--------------VVDFEAHPDYIRSI 103
Query: 167 IWNEQYEKLTSS--DETGLIIVW 187
+ + S D T + +W
Sbjct: 104 AVHPTKPYVLSGSDDLT--VKLW 124
Score = 38.9 bits (91), Expect = 8e-04
Identities = 15/84 (17%), Positives = 30/84 (35%), Gaps = 18/84 (21%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ +A H + ++ G DD +K+ + + Q+ +GH V +
Sbjct: 100 IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA-------------LEQTFEGHEHFVMCV 146
Query: 167 IWNEQYEKL---TSSDETGLIIVW 187
+N + D T + VW
Sbjct: 147 AFNPKDPSTFASGCLDRT--VKVW 168
Score = 37.0 bits (86), Expect = 0.003
Identities = 10/60 (16%), Positives = 20/60 (33%), Gaps = 14/60 (23%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V + +H + W+ G +++ +T +S+Q VRA
Sbjct: 16 VKGIDFHPTEPWVLTTLYSGRVEIWNYETQV--------------EVRSIQVTETPVRAG 61
Score = 35.8 bits (83), Expect = 0.007
Identities = 15/84 (17%), Positives = 24/84 (28%), Gaps = 19/84 (22%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V+ +H I G +DG LK+ T K ++L + I
Sbjct: 231 VSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE--------------KTLNVGLERSWCI 276
Query: 167 IW--NEQYEKLTS-SDETGLIIVW 187
+ + S D V
Sbjct: 277 ATHPTGRKNYIASGFDNG--FTVL 298
Score = 33.1 bits (76), Expect = 0.052
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 16/83 (19%)
Query: 107 VNCLAWHQ--NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
VN + ++ ++ ++ DD +K+ T +L+GH V
Sbjct: 187 VNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV--------------ATLEGHMSNVS 232
Query: 165 AIIWNEQYEKLTSSDETGLIIVW 187
+++ + S E G + +W
Sbjct: 233 FAVFHPTLPIIISGSEDGTLKIW 255
Score = 27.0 bits (60), Expect = 6.2
Identities = 11/101 (10%), Positives = 29/101 (28%), Gaps = 22/101 (21%)
Query: 106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKES-------------TGQVAAANV---- 148
K W + A+ + G +K K S +G +
Sbjct: 394 KCQDFVWGPDSNSYALIDETGQIKYYKNFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFV 453
Query: 149 ---NLAMNQSLQGHSGKVRAIIWNE--QYEKLTSSDETGLI 184
+ ++ + +IW++ + + +++ G
Sbjct: 454 YFFDWDNGTLVRRIDVNAKDVIWSDNGELVMIVNTNSNGDE 494
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat,
biosynthetic prote structural genomics, structural
genomics consortium; 1.70A {Homo sapiens}
Length = 345
Score = 41.4 bits (98), Expect = 9e-05
Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 10/84 (11%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ +AW Q G +A D ++V + D + + Q HS V +
Sbjct: 255 IYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTA-----HLHQAHSQDVNCV 309
Query: 167 IWNEQYEKL---TSSDETGLIIVW 187
WN + L S D + W
Sbjct: 310 AWNPKEPGLLASCSDDGE--VAFW 331
Score = 38.7 bits (91), Expect = 8e-04
Identities = 11/65 (16%), Positives = 24/65 (36%), Gaps = 11/65 (16%)
Query: 104 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKV 163
+++ LAW+ +A G D +++ + + + +GH V
Sbjct: 16 DSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSW-----------ICKSVLSEGHQRTV 64
Query: 164 RAIIW 168
R + W
Sbjct: 65 RKVAW 69
Score = 36.8 bits (86), Expect = 0.003
Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 12/63 (19%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V + WH +Q +A D +K+ + + L+GH V ++
Sbjct: 153 VKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCAT------------LEGHESTVWSL 200
Query: 167 IWN 169
++
Sbjct: 201 AFD 203
Score = 30.2 bits (69), Expect = 0.40
Identities = 16/85 (18%), Positives = 33/85 (38%), Gaps = 19/85 (22%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V +AW + +A D + V ++D E L H+ V+ +
Sbjct: 108 VKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECV-----------SVLNSHTQDVKHV 156
Query: 167 IW--NEQYEKL--TSSDETGLIIVW 187
+W +++ L S D+T + ++
Sbjct: 157 VWHPSQEL--LASASYDDT--VKLY 177
Score = 30.2 bits (69), Expect = 0.40
Identities = 11/54 (20%), Positives = 17/54 (31%), Gaps = 15/54 (27%)
Query: 107 VNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH 159
VNC+AW+ + +A DDG + K + H
Sbjct: 306 VNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG--------------LHHHHHH 345
Score = 29.8 bits (68), Expect = 0.51
Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 12/63 (19%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V +AW ++A D + K + L+GH +V+++
Sbjct: 64 VRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTT------------LEGHENEVKSV 111
Query: 167 IWN 169
W
Sbjct: 112 AWA 114
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 41.4 bits (98), Expect = 9e-05
Identities = 19/115 (16%), Positives = 38/115 (33%), Gaps = 23/115 (20%)
Query: 11 LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVAD 54
L SS D+WS+G + + F S+ + I ++
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 251
Query: 55 YSFPP-------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
+F + I ++L+ + L + KR +A L +F ++
Sbjct: 252 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC 306
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF,
cofilin, structural genomics, PSI, protein structure
initiative; 1.70A {Caenorhabditis elegans} SCOP:
b.69.4.1 b.69.4.1 PDB: 1pev_A
Length = 611
Score = 41.4 bits (98), Expect = 1e-04
Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 15/83 (18%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ +A+ N ++ + + E LA S H+ KV +
Sbjct: 494 ITSVAFSNNGAFLVATDQSRKVIPYSVANNFE-----------LAHTNSWTFHTAKVACV 542
Query: 167 IWNEQYEKL--TSSDETGLIIVW 187
W+ +L S D + +IVW
Sbjct: 543 SWSPDNVRLATGSLDNS--VIVW 563
Score = 41.0 bits (97), Expect = 1e-04
Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 17/83 (20%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+C+A ++ ++AVGG D + V KL S + H ++ ++
Sbjct: 451 SSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVK-------------TIVHPAEITSV 497
Query: 167 IW--NEQYEKLTSSDETGLIIVW 187
+ N + L ++D++ +I +
Sbjct: 498 AFSNNGAF--LVATDQSRKVIPY 518
Score = 37.2 bits (87), Expect = 0.003
Identities = 13/81 (16%), Positives = 25/81 (30%), Gaps = 14/81 (17%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
L + + +G + + + G Q GH+ + A+
Sbjct: 285 DQQLGIIWTKQALVSISANGFINFVNPELGSID--------------QVRYGHNKAITAL 330
Query: 167 IWNEQYEKLTSSDETGLIIVW 187
+ + L S+D G I W
Sbjct: 331 SSSADGKTLFSADAEGHINSW 351
Score = 35.6 bits (83), Expect = 0.007
Identities = 10/81 (12%), Positives = 24/81 (29%), Gaps = 13/81 (16%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ L+ + + +G + + TG + H+ + I
Sbjct: 327 ITALSSSADGKTLFSADAEGHINSWDISTGISNR-------------VFPDVHATMITGI 373
Query: 167 IWNEQYEKLTSSDETGLIIVW 187
+ + T S + L +V
Sbjct: 374 KTTSKGDLFTVSWDDHLKVVP 394
Score = 35.2 bits (82), Expect = 0.011
Identities = 8/62 (12%), Positives = 15/62 (24%), Gaps = 12/62 (19%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ + A G G +++ + SG V+ I
Sbjct: 62 TTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTT------------IPVFSGPVKDI 109
Query: 167 IW 168
W
Sbjct: 110 SW 111
Score = 34.1 bits (79), Expect = 0.027
Identities = 8/61 (13%), Positives = 19/61 (31%), Gaps = 15/61 (24%)
Query: 107 VNCLAWHQN-QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
+N + + + I G DD + + + K + H+ V +
Sbjct: 150 MNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKF--------------KSTFGEHTKFVHS 195
Query: 166 I 166
+
Sbjct: 196 V 196
Score = 32.6 bits (75), Expect = 0.080
Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 7/62 (11%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V+ + ++ + A G DG + + G + V + HSG V +
Sbjct: 193 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK-------TGVFEDDSLKNVAHSGSVFGL 245
Query: 167 IW 168
W
Sbjct: 246 TW 247
Score = 32.6 bits (75), Expect = 0.089
Identities = 12/84 (14%), Positives = 24/84 (28%), Gaps = 16/84 (19%)
Query: 106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
KV C++W + +A G D + V ++ + + H+
Sbjct: 538 KVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIII------------KGAHAMSSVN 585
Query: 166 IIWNEQYEKL--TSSDETGLIIVW 187
+ + D I W
Sbjct: 586 SVIWLNETTIVSAGQDSN--IKFW 607
Score = 31.4 bits (72), Expect = 0.21
Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 16/62 (25%)
Query: 107 VNCLAWHQNQGWIAVGGD--DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
V ++W IA G+ + V DTG + +L G + +
Sbjct: 106 VKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSN--------------GNLTGQARAMN 151
Query: 165 AI 166
++
Sbjct: 152 SV 153
Score = 27.2 bits (61), Expect = 5.0
Identities = 18/83 (21%), Positives = 25/83 (30%), Gaps = 17/83 (20%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR-- 164
V L W + IA D +K+ + T K G + +
Sbjct: 242 VFGLTWSPDGTKIASASADKTIKIWNVATLKV-------------EKTIPVGTRIEDQQL 288
Query: 165 AIIWNEQYEKLTSSDETGLIIVW 187
IIW +Q L S G I
Sbjct: 289 GIIWTKQA--LVSISANGFINFV 309
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 41.2 bits (97), Expect = 1e-04
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 20 DMWSLGVLLYILLSGVSPFLDESEEETRA--HISVADYSFPPEQCGHISVPARELIGQLL 77
D+WSLG+ L G P + + I + PP G+ S P +E + L
Sbjct: 201 DIWSLGITAIELARGEPPHSEL--HPMKVLFLIPKNN---PPTLEGNYSKPLKEFVEACL 255
Query: 78 NTHADKRPTAGQLLQVAWFAEIAIPNN 104
N RPTA +LL+ + A +
Sbjct: 256 NKEPSFRPTAKELLKHKFILRNAKKTS 282
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 40.3 bits (95), Expect = 2e-04
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 12 GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA------DYSFPPEQCGHI 65
G S +D++SLG +LY +L+G PF +S +SVA D P + +
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP------VSVAYQHVREDPIPPSARHEGL 246
Query: 66 SVPARELIGQLLNTHADKRP-TAGQLLQ 92
S ++ + L + + R TA ++
Sbjct: 247 SADLDAVVLKALAKNPENRYQTAAEMRA 274
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD
repeat, scaffold protein, ATP- binding, endosome, golgi
apparatus; 1.80A {Saccharomyces cerevisiae}
Length = 437
Score = 40.5 bits (95), Expect = 2e-04
Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Query: 104 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTG--QVAAANVNLAMNQSLQGHSG 161
++ V + N AV DG + VLK++ ++ + + + ++ +
Sbjct: 111 SSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEY 170
Query: 162 KVRAIIWN-EQYEKLTSSDETGLIIVW 187
VR + E+ L + +I++
Sbjct: 171 AVRMRAFVNEEKSLLVALTNLSRVIIF 197
Score = 30.9 bits (70), Expect = 0.24
Identities = 3/32 (9%), Positives = 12/32 (37%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKE 138
V+ + + + +G G++ + +
Sbjct: 217 VSSICIDEECCVLILGTTRGIIDIWDIRFNVL 248
Score = 30.5 bits (69), Expect = 0.34
Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 10/82 (12%)
Query: 107 VNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
+ A + ++ G D G++K+ + + G+V ++++ S V
Sbjct: 66 ITSSAVSPGETPYLITGSDQGVIKIW--NLKEIIVGEVYSSSL-------TYDCSSTVTQ 116
Query: 166 IIWNEQYEKLTSSDETGLIIVW 187
I ++ S + G IIV
Sbjct: 117 ITMIPNFDAFAVSSKDGQIIVL 138
Score = 30.5 bits (69), Expect = 0.36
Identities = 12/84 (14%), Positives = 27/84 (32%), Gaps = 17/84 (20%)
Query: 107 VNCLAWHQN-QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG--HSGKV 163
V A+ + + + + + + T + Q ++ G V
Sbjct: 172 VRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL--------------QIIENSPRHGAV 217
Query: 164 RAIIWNEQYEKLTSSDETGLIIVW 187
+I +E+ L G+I +W
Sbjct: 218 SSICIDEECCVLILGTTRGIIDIW 241
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat
protein TRM82; S-adenosyl-L-methionine, tRNA processing,
phosphorylation, M7G, spout MT, WD repeat; 2.40A
{Saccharomyces cerevisiae}
Length = 450
Score = 40.5 bits (94), Expect = 2e-04
Identities = 14/98 (14%), Positives = 32/98 (32%), Gaps = 11/98 (11%)
Query: 107 VNCLAWHQNQGW-IAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
+ L ++ IA D L V +D ++ ++ + S + A
Sbjct: 105 IRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKL----------RKRFCFSKRPNA 154
Query: 166 IIWNEQYEKLTSSDETGLIIVWMLYKEKNPQDKLPPLM 203
I E + +D+ G + + + P++
Sbjct: 155 ISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPIL 192
Score = 32.4 bits (73), Expect = 0.10
Identities = 8/85 (9%), Positives = 31/85 (36%), Gaps = 13/85 (15%)
Query: 106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
+ N ++ ++ + + G + + +++ E + + GH +
Sbjct: 151 RPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQ----------EPILGHVSMLTD 200
Query: 166 IIW---NEQYEKLTSSDETGLIIVW 187
+ ++ ++ + +SD I +
Sbjct: 201 VHLIKDSDGHQFIITSDRDEHIKIS 225
Score = 28.1 bits (62), Expect = 2.4
Identities = 6/32 (18%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKE 138
V+ + ++ + G D + TGK
Sbjct: 244 VSSICCGKD-YLLLSAGGDDKIFAWDWKTGKN 274
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase
activation, cytochrome C, procaspase-9, A nucleotide,
cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A*
3iyt_A* 3iza_A*
Length = 1249
Score = 40.6 bits (95), Expect = 2e-04
Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 16/83 (19%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V C A+ + +IA D +K+ TGK + HS +V
Sbjct: 660 VLCCAFSSDDSYIATCSADKKVKIWDSATGKL--------------VHTYDEHSEQVNCC 705
Query: 167 IW--NEQYEKLTSSDETGLIIVW 187
+ + L + + +W
Sbjct: 706 HFTNKSNHLLLATGSNDFFLKLW 728
Score = 40.2 bits (94), Expect = 3e-04
Identities = 11/81 (13%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
VN + + +A DG L++ + + E + L+ + V+
Sbjct: 746 VNHCRFSPDDELLASCSADGTLRLWDVRSANE-RKSINVKRFFLSSEDPPEDVEVIVKCC 804
Query: 167 IWNEQYEKLTSSDETGLIIVW 187
W+ +K+ + + +++
Sbjct: 805 SWSADGDKIIVAAKNKVLLFD 825
Score = 39.4 bits (92), Expect = 5e-04
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 14/81 (17%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V+C + ++A G +DG +K+++L + S GH VR I
Sbjct: 964 VSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVF--------------SSGVGHKKAVRHI 1009
Query: 167 IWNEQYEKLTSSDETGLIIVW 187
+ + L SS E +I VW
Sbjct: 1010 QFTADGKTLISSSEDSVIQVW 1030
Score = 38.7 bits (90), Expect = 0.001
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 14/81 (17%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V + Q+ IA G D L+V K +TG++ ++ H +V
Sbjct: 618 VYHACFSQDGQRIASCGADKTLQVFKAETGEKL--------------LDIKAHEDEVLCC 663
Query: 167 IWNEQYEKLTSSDETGLIIVW 187
++ + + + +W
Sbjct: 664 AFSSDDSYIATCSADKKVKIW 684
Score = 36.7 bits (85), Expect = 0.003
Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 14/81 (17%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V A + + D K+ D L+GH+G VR
Sbjct: 1088 VLSCAISSDATKFSSTSADKTAKIWSFDLLSPL--------------HELKGHNGCVRCS 1133
Query: 167 IWNEQYEKLTSSDETGLIIVW 187
++ L + D+ G I +W
Sbjct: 1134 AFSLDGILLATGDDNGEIRIW 1154
Score = 36.7 bits (85), Expect = 0.004
Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 15/81 (18%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V Q+ + DG +KV + TG+ + H G V +
Sbjct: 1047 VKDFRLLQD-SRLLSWSFDGTVKVWNVITGRIE--------------RDFTCHQGTVLSC 1091
Query: 167 IWNEQYEKLTSSDETGLIIVW 187
+ K +S+ +W
Sbjct: 1092 AISSDATKFSSTSADKTAKIW 1112
Score = 36.3 bits (84), Expect = 0.006
Identities = 16/81 (19%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V C A+ + +A G D+G +++ + S GQ+ + +++ + H G V +
Sbjct: 1130 VRCSAFSLDGILLATGDDNGEIRIWNV-----SDGQLLHSCAPISVEEGTATHGGWVTDV 1184
Query: 167 IWNEQYEKLTSSDETGLIIVW 187
++ + L S+ + W
Sbjct: 1185 CFSPDSKTLVSAGGY--LKWW 1203
Score = 36.0 bits (83), Expect = 0.007
Identities = 11/81 (13%), Positives = 24/81 (29%), Gaps = 17/81 (20%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ + +N+ + + L+++ TG Q +V
Sbjct: 925 EIDVVFQENETMVLAVDNIRGLQLIAGKTG-----------------QIDYLPEAQVSCC 967
Query: 167 IWNEQYEKLTSSDETGLIIVW 187
+ E + DE G I +
Sbjct: 968 CLSPHLEYVAFGDEDGAIKII 988
Score = 35.6 bits (82), Expect = 0.010
Identities = 7/81 (8%), Positives = 24/81 (29%), Gaps = 14/81 (17%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ + + +++ +D+ + +GH V +
Sbjct: 843 IQYCDFSPYDHLAVIALSQYCVELWNIDSRLKV--------------ADCRGHLSWVHGV 888
Query: 167 IWNEQYEKLTSSDETGLIIVW 187
+++ ++ + I VW
Sbjct: 889 MFSPDGSSFLTASDDQTIRVW 909
Score = 34.8 bits (80), Expect = 0.016
Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 14/81 (17%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V C +W + I V + KVL D ++G +A + GH ++
Sbjct: 801 VKCCSWSADGDKIIVAAKN---KVLLFDI--HTSGLLA---------EIHTGHHSTIQYC 846
Query: 167 IWNEQYEKLTSSDETGLIIVW 187
++ + + +W
Sbjct: 847 DFSPYDHLAVIALSQYCVELW 867
Score = 34.8 bits (80), Expect = 0.018
Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 18/82 (21%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V + + + + +D +++V TG LQ H V+
Sbjct: 1006 VRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVF---------------LQAHQETVKDF 1050
Query: 167 IWNEQYEKLT-SSDETGLIIVW 187
+ L+ S D T + VW
Sbjct: 1051 RLLQDSRLLSWSFDGT--VKVW 1070
Score = 32.5 bits (74), Expect = 0.10
Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 16/83 (19%)
Query: 107 VNCLAWH--QNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
VNC + N +A G +D LK+ L+ + ++ GH+ V
Sbjct: 702 VNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECR--------------NTMFGHTNSVN 747
Query: 165 AIIWNEQYEKLTSSDETGLIIVW 187
++ E L S G + +W
Sbjct: 748 HCRFSPDDELLASCSADGTLRLW 770
Score = 30.2 bits (68), Expect = 0.48
Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 19/103 (18%)
Query: 88 GQLLQVAWFAEIAIPNNT---KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVA 144
GQLL + T V + + + + G LK + TG S
Sbjct: 1159 GQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGGY--LKWWNVATGDSS----- 1211
Query: 145 AANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVW 187
Q+ + ++ I + + + D G++ +
Sbjct: 1212 ---------QTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYIL 1245
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori
complex, nuclear pore complex, macromolecular assembly,
MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A
3f3p_A 3ewe_A
Length = 351
Score = 39.6 bits (93), Expect = 3e-04
Identities = 15/90 (16%), Positives = 27/90 (30%), Gaps = 23/90 (25%)
Query: 107 VNCLAWHQNQGW---IAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKV 163
CL+W ++ +AV + + + GK L GH +
Sbjct: 170 DFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAK------------LPGHKSLI 217
Query: 164 RAIIW--NEQYEKLT----SSDETGLIIVW 187
R+I W + D I ++
Sbjct: 218 RSISWAPSIGRWYQLIATGCKDGR--IRIF 245
Score = 37.3 bits (87), Expect = 0.002
Identities = 12/82 (14%), Positives = 25/82 (30%), Gaps = 15/82 (18%)
Query: 107 VNCLAW-HQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
+ + W G IA D +K+ + E Q + +L G +
Sbjct: 60 IVAIDWASPEYGRIIASASYDKTVKLWE-----EDPDQEECSGRRWNKLCTLNDSKGSLY 114
Query: 165 AIIWNEQYEKLTSSDETGLIIV 186
++ + + GL +
Sbjct: 115 SVKF--------APAHLGLKLA 128
Score = 36.1 bits (84), Expect = 0.005
Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 10/88 (11%)
Query: 107 VNCLAW--HQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
+ + + +A G+DG+L++ + ++ H
Sbjct: 113 LYSVKFAPAHLGLKLACLGNDGILRLYDALEPS-DLRSWTLTSEMKVLSIPPANHLQSDF 171
Query: 165 AIIWN---EQYEKL--TSSDETGLIIVW 187
+ W EKL ++ ++ II
Sbjct: 172 CLSWCPSRFSPEKLAVSALEQA--IIYQ 197
Score = 33.0 bits (76), Expect = 0.053
Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 18/80 (22%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V+ + + +A D +KV KLD ++ + S + H + AI
Sbjct: 14 VHDVVYDFYGRHVATCSSDQHIKVFKLDKDTS-NWEL---------SDSWRAHDSSIVAI 63
Query: 167 IWNEQYEKLTSSDETGLIIV 186
W +S E G II
Sbjct: 64 DW--------ASPEYGRIIA 75
Score = 27.6 bits (62), Expect = 2.6
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKE 138
V ++W+ ++ GDDG +++ K E
Sbjct: 309 VWSVSWNLTGTILSSAGDDGKVRLWKATYSNE 340
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 39.5 bits (93), Expect = 4e-04
Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 28/122 (22%)
Query: 11 LGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS------------------ 51
+G + GP D+W++G + LLSGV + +S+ + I
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ 234
Query: 52 -VADYSFPPEQCG--------HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
+ P + +IS PA L+ L+ +R T QLL +F I
Sbjct: 235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREI 294
Query: 103 NN 104
+
Sbjct: 295 ED 296
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 38.8 bits (91), Expect = 7e-04
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 12 GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS 51
S A D+++L +LY L+G P+ + AHI+
Sbjct: 209 ESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHIN 248
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed
beta-propeller, protein binding; 2.30A {Saccharomyces
cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Length = 615
Score = 38.4 bits (90), Expect = 0.001
Identities = 12/89 (13%), Positives = 31/89 (34%), Gaps = 13/89 (14%)
Query: 98 EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ 157
++ P K + ++ ++ +IA G G + + L + + T +
Sbjct: 482 DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSR-------------WA 528
Query: 158 GHSGKVRAIIWNEQYEKLTSSDETGLIIV 186
+ K+ AI W + + ++
Sbjct: 529 FRTSKINAISWKPAEKGANEEEIEEDLVA 557
Score = 34.5 bits (80), Expect = 0.019
Identities = 13/85 (15%), Positives = 25/85 (29%), Gaps = 17/85 (20%)
Query: 107 VNCLAWHQN-QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
+N Q+ GDDG + + K A +++ VR
Sbjct: 163 INACHLKQSRPMRSMTVGDDGSVVFYQGPPFKF-----------SASDRTHHKQGSFVRD 211
Query: 166 IIWNEQYEKL---TSSDETGLIIVW 187
+ ++ + SD I +
Sbjct: 212 VEFSPDSGEFVITVGSDRK--ISCF 234
Score = 33.7 bits (78), Expect = 0.036
Identities = 7/63 (11%), Positives = 20/63 (31%), Gaps = 15/63 (23%)
Query: 107 VNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
V + + + G ++ G D + +G+ + ++ V+
Sbjct: 209 VRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL--------------KYIEDDQEPVQG 254
Query: 166 IIW 168
I+
Sbjct: 255 GIF 257
Score = 33.7 bits (78), Expect = 0.037
Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 18/71 (25%)
Query: 117 GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLT 176
G I DG L +L + +++ GH+ + A+ N L
Sbjct: 310 GRIISLSLDGTLNFYELGHDEVL--------------KTISGHNKGITALTVN----PLI 351
Query: 177 SSDETGLIIVW 187
S G I+ W
Sbjct: 352 SGSYDGRIMEW 362
Score = 33.7 bits (78), Expect = 0.038
Identities = 12/87 (13%), Positives = 27/87 (31%), Gaps = 10/87 (11%)
Query: 107 VNCLAW--HQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
V + + + ++ G + G + V KES +V + + Q +G +
Sbjct: 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESN------SVEVNVKSEFQVLAGPIS 120
Query: 165 AIIW--NEQYEKLTSSDETGLIIVWML 189
I W + + +
Sbjct: 121 DISWDFEGRRLCVVGEGRDNFGVFISW 147
Score = 32.2 bits (74), Expect = 0.096
Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 19/85 (22%)
Query: 107 VNCLAWHQNQGWIAV--GGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
++ ++W + V G D + D+G + GHS ++
Sbjct: 119 ISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNS--------------LGEVSGHSQRIN 164
Query: 165 AIIW--NEQYEKLTSSDETGLIIVW 187
A + +T D+ G ++ +
Sbjct: 165 ACHLKQSRPMRSMTVGDD-GSVVFY 188
Score = 32.2 bits (74), Expect = 0.096
Identities = 14/93 (15%), Positives = 29/93 (31%), Gaps = 26/93 (27%)
Query: 106 KVNCLAWH----------QNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQS 155
K+N ++W + +A G D + + + + ++
Sbjct: 533 KINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKII-------------KA 579
Query: 156 LQGHSGKVRAIIWNEQYEKLTSS-DETGLIIVW 187
L H V ++W ++S D I W
Sbjct: 580 LNAHKDGVNNLLWETPSTLVSSGADAC--IKRW 610
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 38.0 bits (89), Expect = 0.001
Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 28/120 (23%)
Query: 11 LGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVA 53
+G G + D+W++G L+ + G F +S+ + HI
Sbjct: 197 VGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256
Query: 54 DY---SFPP--------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
+ P + +S +L + L+ DKRP +LL +F
Sbjct: 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFA 316
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller,
structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1
PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C*
2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Length = 372
Score = 38.0 bits (89), Expect = 0.001
Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 12/62 (19%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
++C AW++++ IA+ ++ + + + K L+ H+G+V +
Sbjct: 11 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHE------------LKEHNGQVTGV 58
Query: 167 IW 168
W
Sbjct: 59 DW 60
Score = 36.1 bits (84), Expect = 0.006
Identities = 10/66 (15%), Positives = 17/66 (25%), Gaps = 4/66 (6%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMN----QSLQGHSGK 162
V L WH N +A G D ++ + + G
Sbjct: 145 VLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW 204
Query: 163 VRAIIW 168
V + +
Sbjct: 205 VHGVCF 210
Score = 34.5 bits (80), Expect = 0.018
Identities = 8/62 (12%), Positives = 18/62 (29%), Gaps = 10/62 (16%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
C+ W N+ AVG ++ + + + + V ++
Sbjct: 99 ARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW----------VCKHIKKPIRSTVLSL 148
Query: 167 IW 168
W
Sbjct: 149 DW 150
Score = 31.8 bits (73), Expect = 0.14
Identities = 8/82 (9%), Positives = 25/82 (30%), Gaps = 15/82 (18%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V+ + + N +A D + + D +L + + A+
Sbjct: 205 VHGVCFSANGSRVAWVSHDSTVCLADADKKMAV--------------ATLASETLPLLAV 250
Query: 167 IWNEQYEKLTS-SDETGLIIVW 187
+ + + + D ++ +
Sbjct: 251 TFITESSLVAAGHDCFPVLFTY 272
Score = 26.4 bits (59), Expect = 6.2
Identities = 16/100 (16%), Positives = 25/100 (25%), Gaps = 20/100 (20%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V + W + I G D V L V + + R +
Sbjct: 55 VTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLV------------ILRINRAARCV 102
Query: 167 IW--NEQYEKL--TSSDETGLIIVWMLYKEKNPQDKLPPL 202
W NE+ K S I + +E +
Sbjct: 103 RWAPNEK--KFAVGSGSRV--ISICYFEQENDWWVCKHIK 138
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A
{Homo sapiens}
Length = 368
Score = 38.0 bits (89), Expect = 0.001
Identities = 14/85 (16%), Positives = 26/85 (30%), Gaps = 21/85 (24%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V + W + + D K+ L + + + H V+ I
Sbjct: 89 VLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ---------------IAQHDAPVKTI 133
Query: 167 IWNE--QYEKL--TSSDETGLIIVW 187
W + Y + S D+T + W
Sbjct: 134 HWIKAPNYSCVMTGSWDKT--LKFW 156
Score = 34.9 bits (81), Expect = 0.011
Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 14/63 (22%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
VN +A+H G +A G DG D + ++ + + A
Sbjct: 276 VNGIAFHPVHGTLATVGSDGRFSFWDKDARTKL--------------KTSEQLDQPISAC 321
Query: 167 IWN 169
+N
Sbjct: 322 CFN 324
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 37.8 bits (88), Expect = 0.001
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 8/80 (10%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRA--HISVADYSFPPE-QCGHISVPAREL 72
D+WSLG+ L P + A HI+ + P Q GH S R
Sbjct: 231 DGKVDVWSLGITCIELAERKPPLFNM--NAMSALYHIAQNE---SPALQSGHWSEYFRNF 285
Query: 73 IGQLLNTHADKRPTAGQLLQ 92
+ L RPT+ LL+
Sbjct: 286 VDSCLQKIPQDRPTSEVLLK 305
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 37.7 bits (88), Expect = 0.001
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRA--HISVADYSFPP--EQCGHISVPARE 71
D+WSLG+ L + P + + R I+ +D PP SV R+
Sbjct: 200 DYKADIWSLGITLIEMAQIEPPHHELNP--MRVLLKIAKSD---PPTLLTPSKWSVEFRD 254
Query: 72 LIGQLLNTHADKRPTAGQLLQ 92
+ L+ + + RP+A QLL+
Sbjct: 255 FLKIALDKNPETRPSAAQLLE 275
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 37.6 bits (88), Expect = 0.001
Identities = 26/117 (22%), Positives = 41/117 (35%), Gaps = 25/117 (21%)
Query: 11 LGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVA 53
G+ G DMW++G +L LL V +S+ + I S+
Sbjct: 185 FGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP 244
Query: 54 DY-SFPP-------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
DY +F +LI L + R TA Q L++ +F+ P
Sbjct: 245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGP 301
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 37.6 bits (88), Expect = 0.001
Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Query: 12 GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEET-RAHISVADYSFPPEQCGHISVPAR 70
G + TD++S+G++LY +L G PF E+ HI + + + I
Sbjct: 186 GEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLS 245
Query: 71 ELIGQLLNTHADKRP-TAGQLLQ 92
+I + R T ++
Sbjct: 246 NVILRATEKDKANRYKTIQEMKD 268
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 37.5 bits (88), Expect = 0.001
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 26/118 (22%)
Query: 11 LGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVA 53
LG+ + D+WSLG + +++ + F +SE + I S+
Sbjct: 176 LGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 54 DY--SFPP-------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
DY SFP + + R L+ Q+L+ +KR +A L +F ++ P
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 37.6 bits (87), Expect = 0.001
Identities = 21/134 (15%), Positives = 35/134 (26%), Gaps = 52/134 (38%)
Query: 11 LGSSAGPSTDMWSLGVLLYILLSGVSPF---LDESEEETRAHI----------------- 50
+GS D+WS + + L +G F E HI
Sbjct: 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVA 325
Query: 51 ----------------------------SVADYSFPPEQCGHISVPARELIGQLLNTHAD 82
V Y + E+ + + + +L +
Sbjct: 326 GKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFT----DFLLPMLELIPE 381
Query: 83 KRPTAGQLLQVAWF 96
KR TA + L+ W
Sbjct: 382 KRATAAECLRHPWL 395
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 37.3 bits (87), Expect = 0.002
Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP-EQCGHISVPARELIG 74
D+WSLG+++ ++ G P+ + +A + D P + +S R+ +
Sbjct: 219 ATEVDIWSLGIMVIEMVDGEPPYFSD--SPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLE 276
Query: 75 QLLNTHADKRPTAGQLLQ 92
++L +R TA +LL
Sbjct: 277 RMLVRDPQERATAQELLD 294
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40
repeat, beta propeller, recombination; 1.90A
{Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Length = 397
Score = 37.4 bits (87), Expect = 0.002
Identities = 11/62 (17%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ + G IA G ++G +++ +L T + N S+ +S +R++
Sbjct: 189 ATSVDISER-GLIATGFNNGTVQISELSTLRPLY--------NFESQHSMINNSNSIRSV 239
Query: 167 IW 168
+
Sbjct: 240 KF 241
Score = 34.7 bits (80), Expect = 0.015
Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 8/86 (9%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKL---DTGKESTGQVAAANVNLAMNQSLQGHSGKV 163
+ + + +A+ D + L + G+ G ++ + + HS V
Sbjct: 236 IRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGER-IGSLSVPTHSSQASLGEFAHSSWV 294
Query: 164 RAIIWNEQYEKLTS--SDETGLIIVW 187
++ +N+ E L S D + W
Sbjct: 295 MSLSFNDSGETLCSAGWDGK--LRFW 318
Score = 27.4 bits (61), Expect = 4.0
Identities = 4/55 (7%), Positives = 12/55 (21%), Gaps = 4/55 (7%)
Query: 118 WIAVGGDDGLLKVLKLDTGKESTGQVAAANVN----LAMNQSLQGHSGKVRAIIW 168
+ G + K + + + +S S ++
Sbjct: 140 RLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDI 194
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national
project on prote structural and functional analysis,
structural genomics CON SGC; HET: M3L; 1.58A {Homo
sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A*
3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Length = 366
Score = 37.6 bits (88), Expect = 0.002
Identities = 13/88 (14%), Positives = 30/88 (34%), Gaps = 23/88 (26%)
Query: 107 VNCLAW----HQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGK 162
AW + + +AV G G+++++ T + + GH
Sbjct: 72 FYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCI--------------KHYVGHGNA 117
Query: 163 VRAIIWNEQYEKL---TSSDETGLIIVW 187
+ + ++ + L S D + +W
Sbjct: 118 INELKFHPRDPNLLLSVSKDHA--LRLW 143
Score = 35.7 bits (83), Expect = 0.007
Identities = 8/80 (10%), Positives = 25/80 (31%), Gaps = 10/80 (12%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V+C+ W + I + + K ++ ++ + N+ + + +
Sbjct: 234 VDCVRWLGD--LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYM 291
Query: 167 IWNEQYEKLTSSDETGLIIV 186
+ S D ++
Sbjct: 292 RF--------SMDFWQKMLA 303
Score = 31.8 bits (73), Expect = 0.13
Identities = 10/64 (15%), Positives = 24/64 (37%), Gaps = 12/64 (18%)
Query: 107 VNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
+N L +H + D L++ + T +A+ ++GH +V +
Sbjct: 118 INELKFHPRDPNLLLSVSKDHALRLWNIQTDTL-----------VAIFGGVEGHRDEVLS 166
Query: 166 IIWN 169
++
Sbjct: 167 ADYD 170
Score = 31.5 bits (72), Expect = 0.19
Identities = 12/95 (12%), Positives = 25/95 (26%), Gaps = 16/95 (16%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKE-----------STGQVAA---ANVNLAM 152
V + I G D LK+ ++++ + ++
Sbjct: 164 VLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPD 223
Query: 153 NQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVW 187
+ H V + W S + I+ W
Sbjct: 224 FSTRDIHRNYVDCVRWLGDLILSKSCENA--IVCW 256
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural
protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Length = 402
Score = 37.4 bits (87), Expect = 0.002
Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 13/85 (15%)
Query: 107 VNCLAWH-QNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
V +AW N IA G +D + V ++ G +L+GH+ +V
Sbjct: 84 VLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPV-------ITLEGHTKRVGI 136
Query: 166 IIWNEQYEKL---TSSDETGLIIVW 187
+ W+ + + D I+VW
Sbjct: 137 VAWHPTAQNVLLSAGCDNV--ILVW 159
Score = 32.4 bits (74), Expect = 0.076
Identities = 14/83 (16%), Positives = 28/83 (33%), Gaps = 13/83 (15%)
Query: 106 KVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
+V +AWH Q + G D ++ V + TG + H +
Sbjct: 133 RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA------------VLTLGPDVHPDTIY 180
Query: 165 AIIWNEQYEKLTSSDETGLIIVW 187
++ W+ + +S + V
Sbjct: 181 SVDWSRDGALICTSCRDKRVRVI 203
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription,
hypothetica protein, preinitiation complex, yeast RNA
polymerase III; 3.2A {Saccharomyces cerevisiae}
Length = 524
Score = 37.5 bits (86), Expect = 0.002
Identities = 7/41 (17%), Positives = 12/41 (29%), Gaps = 3/41 (7%)
Query: 102 PNNTKVNCLAWHQNQ---GWIAVGGDDGLLKVLKLDTGKES 139
+ + C W++ A GLL + L
Sbjct: 481 AHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEHHH 521
Score = 33.7 bits (76), Expect = 0.034
Identities = 11/103 (10%), Positives = 25/103 (24%), Gaps = 19/103 (18%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ + + L+ + L + AI
Sbjct: 358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAV--------------HPLVSRETTITAI 403
Query: 167 IWNEQYEKLTSSDETGLIIVW-----MLYKEKNPQDKLPPLML 204
+ + + + G +I+ +L+ KN L L
Sbjct: 404 GVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRL 446
Score = 31.4 bits (70), Expect = 0.21
Identities = 6/98 (6%), Positives = 27/98 (27%), Gaps = 17/98 (17%)
Query: 102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSG 161
++ + + + + G +G + L + + Q H
Sbjct: 264 LADSLITTFDFL-SPTTVVCGFKNGFVAEFDLTDPEVPS-------------FYDQVHDS 309
Query: 162 KVRAIIW---NEQYEKLTSSDETGLIIVWMLYKEKNPQ 196
+ ++ + + +++ G ++ +
Sbjct: 310 YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTK 347
Score = 28.3 bits (62), Expect = 2.1
Identities = 18/122 (14%), Positives = 31/122 (25%), Gaps = 33/122 (27%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVL-----------------------KLDTGKESTG-- 141
+ + + + G DG L + K D +
Sbjct: 400 ITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYR 459
Query: 142 -----QVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEK---LTSSDETGLIIVWMLYKEK 193
+V VN + H + WNE S+ GL+ + L E
Sbjct: 460 IDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEH 519
Query: 194 NP 195
+
Sbjct: 520 HH 521
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 37.1 bits (87), Expect = 0.002
Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 27/119 (22%)
Query: 11 LGSSA-GPSTDMWSLGVLLYILLSGVSPFLD-ESEEETRAHI----------------SV 52
G+ S DMWS G + L + P ++ I +
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233
Query: 53 ADY-SFPP--------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
DY +P ++ R+L+ LL + +R +A + LQ +F++ P
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 36.9 bits (86), Expect = 0.002
Identities = 19/81 (23%), Positives = 31/81 (38%), Gaps = 10/81 (12%)
Query: 20 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP--------PEQCGHISVPARE 71
D+WS G+ L +G +P+ + + P E R+
Sbjct: 209 DIWSFGITAIELATGAAPYHKY--PPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRK 266
Query: 72 LIGQLLNTHADKRPTAGQLLQ 92
+I L +KRPTA +LL+
Sbjct: 267 MISLCLQKDPEKRPTAAELLR 287
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A
{Saccharomyces cerevisiae}
Length = 313
Score = 37.1 bits (87), Expect = 0.002
Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 23/86 (26%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKL---DTGKESTGQVAAANVNLAMNQSLQGHSGKV 163
+N + + + + GG D ++ + L +L GH G V
Sbjct: 62 LNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPL--------------YTLIGHQGNV 107
Query: 164 RAIIWNEQYEKLTSS--DETGLIIVW 187
++ + + + S D+T VW
Sbjct: 108 CSLSFQDGV--VISGSWDKT--AKVW 129
Score = 33.6 bits (78), Expect = 0.032
Identities = 12/82 (14%), Positives = 28/82 (34%), Gaps = 18/82 (21%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V C+ N G I G+D +++ + G Q + + + ++
Sbjct: 228 VYCIKLLPN-GDIVSCGEDRTVRIWSKENGSLK--------------QVITLPAISIWSV 272
Query: 167 IWNEQYEKLT-SSDETGLIIVW 187
+ + SSD + ++
Sbjct: 273 DCMSNGDIIVGSSDNL--VRIF 292
Score = 32.9 bits (76), Expect = 0.061
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 19/76 (25%)
Query: 88 GQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAAN 147
G L QV I +P + + + N G I VG D L+++ + +
Sbjct: 256 GSLKQV-----ITLPAIS-IWSVDCMSN-GDIIVGSSDNLVRIFSQEKSR---------- 298
Query: 148 VNLAMNQSLQGHSGKV 163
A ++G
Sbjct: 299 --WASEDEIKGELRSG 312
Score = 27.5 bits (62), Expect = 2.7
Identities = 5/53 (9%), Positives = 15/53 (28%), Gaps = 14/53 (26%)
Query: 117 GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWN 169
+A DG +++ D + G + ++ ++
Sbjct: 30 SKVASVSRDGTVRLWSKDDQWLG--------------TVVYTGQGFLNSVCYD 68
Score = 26.3 bits (59), Expect = 7.4
Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 18/82 (21%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V LA + G +DGL+K++ + TG ++ +GH V I
Sbjct: 187 VRHLAVVDD-GHFISCSNDGLIKLVDMHTGDVL--------------RTYEGHESFVYCI 231
Query: 167 IWNEQYEKLTSS-DETGLIIVW 187
+ ++ D T + +W
Sbjct: 232 KLLPNGDIVSCGEDRT--VRIW 251
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 36.9 bits (86), Expect = 0.002
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP--EQCGHISVPARELI 73
GP D+WSLG++ ++ G P+L+E+ I+ P + +S R+ +
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG---TPELQNPEKLSAIFRDFL 250
Query: 74 GQLLNTHADKRPTAGQLLQ 92
+ L +KR +A +LLQ
Sbjct: 251 NRCLEMDVEKRGSAKELLQ 269
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 36.8 bits (86), Expect = 0.002
Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 27/119 (22%)
Query: 11 LGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVA 53
LGS S D+WS+ + +L F +SE + I ++
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALP 269
Query: 54 DY--SFPPEQ--------CGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
D+ SFP + + +L+ +L KR +A L+ +F+
Sbjct: 270 DWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDFD 328
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 36.8 bits (86), Expect = 0.003
Identities = 17/116 (14%), Positives = 40/116 (34%), Gaps = 27/116 (23%)
Query: 11 LGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVA 53
+GS S D+WS+G + +++G F ++++ I +
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251
Query: 54 DY---SFPP-------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI 99
+ +F +L+ +L +KR +A + +F ++
Sbjct: 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type
2 promoters, transcription, hypothetica protein,
preinitiation complex, yeast RNA polymerase III; 3.2A
{Saccharomyces cerevisiae}
Length = 588
Score = 37.1 bits (85), Expect = 0.003
Identities = 17/108 (15%), Positives = 35/108 (32%), Gaps = 3/108 (2%)
Query: 92 QVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLA 151
+ ++ +C W+ + I VG +DG L+ + E+T +
Sbjct: 117 MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENT---PEFYFESS 173
Query: 152 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEKNPQDKL 199
+ S G V I+W E S+ + + + +
Sbjct: 174 IRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMI 221
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision
repair, xeroderma pigmentosum, cytoplasm, DNA repair;
HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B*
4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Length = 383
Score = 37.0 bits (86), Expect = 0.003
Identities = 9/82 (10%), Positives = 22/82 (26%), Gaps = 13/82 (15%)
Query: 107 VNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
+ + ++Q + V G + QV
Sbjct: 121 ITGMKFNQFNTNQLFVSSIRGATTLRDFSGS---VIQVF---------AKTDSWDYWYCC 168
Query: 166 IIWNEQYEKLTSSDETGLIIVW 187
+ + + L + D TG +++
Sbjct: 169 VDVSVSRQMLATGDSTGRLLLL 190
Score = 35.4 bits (82), Expect = 0.010
Identities = 11/64 (17%), Positives = 20/64 (31%), Gaps = 13/64 (20%)
Query: 107 VNCLAWHQNQGW-IAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
V L WH +AVG G + + D +++ G +
Sbjct: 76 VTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSF------------IQGMGPGDAITG 123
Query: 166 IIWN 169
+ +N
Sbjct: 124 MKFN 127
Score = 34.6 bits (80), Expect = 0.014
Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 20/84 (23%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
C+ ++ +A G G L +L LD + + H KV
Sbjct: 166 YCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFK---------------EKLHKAKVTHA 210
Query: 167 IWN--EQYEKLTSS-DETGLIIVW 187
+N + TSS D T + +W
Sbjct: 211 EFNPRCDWLMATSSVDAT--VKLW 232
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 36.6 bits (85), Expect = 0.003
Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 26/66 (39%)
Query: 6 LKLIDLGSSA--------------------------GPSTDMWSLGVLLYILLSGVSPFL 39
+K+ID GSS G DMWSLG +L LL+G
Sbjct: 241 IKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP 300
Query: 40 DESEEE 45
E E +
Sbjct: 301 GEDEGD 306
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor,
actin-binding, ATP-binding, cytoskeleton, nucleot
binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces
pombe}
Length = 377
Score = 36.6 bits (85), Expect = 0.004
Identities = 14/84 (16%), Positives = 25/84 (29%), Gaps = 3/84 (3%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKEST---GQVAAANVNLAMNQSLQGHSGKV 163
+ L WH N +A G D VL V + + + G V
Sbjct: 149 ILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWV 208
Query: 164 RAIIWNEQYEKLTSSDETGLIIVW 187
A+ ++ L + + +
Sbjct: 209 HAVGFSPSGNALAYAGHDSSVTIA 232
Score = 36.3 bits (84), Expect = 0.005
Identities = 10/83 (12%), Positives = 22/83 (26%), Gaps = 14/83 (16%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ W N+ AVG ++ V + + + + ++
Sbjct: 103 ATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSK----------HLKRPLRSTILSL 152
Query: 167 IWNEQYEKL--TSSDETGLIIVW 187
W+ L +D V
Sbjct: 153 DWHPNNVLLAAGCADRK--AYVL 173
Score = 35.5 bits (82), Expect = 0.008
Identities = 6/62 (9%), Positives = 23/62 (37%), Gaps = 10/62 (16%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V+ + + + +A G D + + ++ + +++ +R++
Sbjct: 208 VHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRAL----------ITVKLSQLPLRSL 257
Query: 167 IW 168
+W
Sbjct: 258 LW 259
Score = 35.1 bits (81), Expect = 0.011
Identities = 8/83 (9%), Positives = 21/83 (25%), Gaps = 16/83 (19%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
A++ + +++ + D + H V +
Sbjct: 14 SYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHART------------FSDHDKIVTCV 61
Query: 167 IWNEQYEKL--TSSDETGLIIVW 187
W + ++ S D V+
Sbjct: 62 DWAPKSNRIVTCSQDRN--AYVY 82
Score = 27.8 bits (62), Expect = 2.3
Identities = 16/100 (16%), Positives = 23/100 (23%), Gaps = 19/100 (19%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V C+ W I D V + T + L + +
Sbjct: 58 VTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG--TWKQTLV---------LLRLNRAATFV 106
Query: 167 IW--NEQYEKL--TSSDETGLIIVWMLYKEKNPQDKLPPL 202
W NE K S I V +E +
Sbjct: 107 RWSPNED--KFAVGSGARV--ISVCYFEQENDWWVSKHLK 142
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 36.3 bits (85), Expect = 0.004
Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 26/115 (22%)
Query: 11 LGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVA 53
+GS + D+WS+G + +++G F SE + I +
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 54 DY--SFPP-------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI 99
Y +F + +L+ ++L ++R TA Q L+ A+F E
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A
{Saccharomyces cerevisiae}
Length = 330
Score = 36.4 bits (85), Expect = 0.004
Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 18/85 (21%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V + WH ++ +A D +++ K V L GH G V +
Sbjct: 156 VKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAV------------LNGHEGTVWSS 203
Query: 167 IW--NEQYEKL--TSSDETGLIIVW 187
+ E +L S D T + VW
Sbjct: 204 DFDKTEGVFRLCSGSDDST--VRVW 226
Score = 33.7 bits (78), Expect = 0.027
Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 11/62 (17%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V +AW N G IA G DG+L V + G+ ++L ++ +
Sbjct: 253 VYNVAWGFN-GLIASVGADGVLAVYEEVDGEWKVFAK----------RALCHGVYEINVV 301
Query: 167 IW 168
W
Sbjct: 302 KW 303
Score = 33.7 bits (78), Expect = 0.030
Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 12/63 (19%)
Query: 106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
K+ + Q +A G D +K++ + + V H +R+
Sbjct: 16 KIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDV----------LDETAHKKAIRS 63
Query: 166 IIW 168
+ W
Sbjct: 64 VAW 66
Score = 31.8 bits (73), Expect = 0.11
Identities = 10/63 (15%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ +AW + +A G D + + + + T + + + ++GH +V+ +
Sbjct: 61 IRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFE-------MDLLAIIEGHENEVKGV 113
Query: 167 IWN 169
W+
Sbjct: 114 AWS 116
Score = 30.6 bits (70), Expect = 0.30
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 10/62 (16%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V +AW + ++A D + + + D E + LQ HS V+ +
Sbjct: 110 VKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECI----------SVLQEHSQDVKHV 159
Query: 167 IW 168
IW
Sbjct: 160 IW 161
Score = 26.0 bits (58), Expect = 9.5
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 107 VNCLAWHQNQG--WIAVGGDDGLLKVLKLDTG 136
+N + W + G +A GGDDG++ L+
Sbjct: 298 INVVKWLELNGKTILATGGDDGIVNFWSLEKA 329
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage
repair; HET: DNA; 3.31A {Homo sapiens}
Length = 408
Score = 36.1 bits (84), Expect = 0.005
Identities = 13/82 (15%), Positives = 21/82 (25%), Gaps = 18/82 (21%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V+C + N + G D + + +
Sbjct: 337 VDCCVFQSNFQELYSGSRDCNILAWVPSLY-----------------EPVPDDDETTTKS 379
Query: 167 IWNEQYEKL-TSSDETGLIIVW 187
N +E +SSDE G W
Sbjct: 380 QLNPAFEDAWSSSDEEGGTSAW 401
Score = 35.7 bits (83), Expect = 0.007
Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 22/87 (25%)
Query: 107 VNCLAWH---QNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKV 163
V +AVG +++ L +G S LQGH ++
Sbjct: 144 VYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS--------------HILQGHRQEI 189
Query: 164 RAIIWNEQYEKL---TSSDETGLIIVW 187
A+ W+ +Y+ + S+D + +W
Sbjct: 190 LAVSWSPRYDYILATASADSR--VKLW 214
Score = 33.4 bits (77), Expect = 0.046
Identities = 11/65 (16%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Query: 107 VNCLAWHQNQGWI-AVGGDDGLLKVLKLDTGKE--STGQVAAANVNLAMNQSLQGHSGKV 163
+ ++W +I A D +K+ + T + A+ + H+GKV
Sbjct: 189 ILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKV 248
Query: 164 RAIIW 168
+ +
Sbjct: 249 NGLCF 253
Score = 31.4 bits (72), Expect = 0.15
Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 7/85 (8%)
Query: 107 VNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
+N L +G ++ GG DG++ + L+ V H V
Sbjct: 46 INTLDIEPVEGRYMLSGGSDGVIVLYDLENSSR-QSYYTCKAVCSIGRDHPDVHRYSVET 104
Query: 166 IIWNEQYEKL---TSSDETGLIIVW 187
+ W + +S D+T + VW
Sbjct: 105 VQWYPHDTGMFTSSSFDKT--LKVW 127
Score = 26.8 bits (60), Expect = 5.2
Identities = 11/72 (15%), Positives = 23/72 (31%), Gaps = 18/72 (25%)
Query: 118 WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS 177
+ V + +G++ L+GH V ++ +++L S
Sbjct: 306 EFVFVPYGSTIAVYTVYSGEQI--------------TMLKGHYKTVDCCVFQSNFQELYS 351
Query: 178 --SDETGLIIVW 187
D I+ W
Sbjct: 352 GSRDCN--ILAW 361
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 36.1 bits (84), Expect = 0.005
Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 20 DMWSLGVLLYILLSGVSPFLD-ESEEETRAHISVADYSFPPE-QCGHISVPARELIGQLL 77
D+WSLG+ + L P+ + + + P+ S + Q L
Sbjct: 195 DIWSLGITMIELAILRFPYDSWGTPFQQLKQVV---EEPSPQLPADKFSAEFVDFTSQCL 251
Query: 78 NTHADKRPTAGQLLQVAWF 96
++ +RPT +L+Q +F
Sbjct: 252 KKNSKERPTYPELMQHPFF 270
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 36.0 bits (84), Expect = 0.005
Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 27/116 (23%)
Query: 11 LGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVA 53
LGS+ DMW +G + Y + +G F + EE I S
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 232
Query: 54 DY---SFPP-------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI 99
++ ++P + +L+ +LL R +A ++ +F +
Sbjct: 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL 288
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 35.7 bits (83), Expect = 0.006
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 13/81 (16%)
Query: 20 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLN 78
DMWS VLL+ L++ PF D S E +++ P S +L+ +N
Sbjct: 193 DMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGI---SPHVSKLMKICMN 249
Query: 79 THADKRPTAGQLLQVAWFAEI 99
KRP F I
Sbjct: 250 EDPAKRPK---------FDMI 261
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 36.0 bits (83), Expect = 0.006
Identities = 9/79 (11%), Positives = 24/79 (30%), Gaps = 11/79 (13%)
Query: 15 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
+TD++++G L L + + + L+
Sbjct: 253 PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLP----------EDDPVLKTYDSYGRLLR 302
Query: 75 QLLNTHADKRP-TAGQLLQ 92
+ ++ +R TA ++
Sbjct: 303 RAIDPDPRQRFTTAEEMSA 321
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 35.8 bits (83), Expect = 0.007
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 9/81 (11%)
Query: 16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRA--HISVADYSFPP--EQCGHISVPARE 71
D+WSLG+ + G P+ D RA I PP + S +
Sbjct: 203 NCVADIWSLGITAIEMAEGKPPYADI--HPMRAIFMIPTNP---PPTFRKPELWSDNFTD 257
Query: 72 LIGQLLNTHADKRPTAGQLLQ 92
+ Q L ++R TA QLLQ
Sbjct: 258 FVKQCLVKSPEQRATATQLLQ 278
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A
{Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Length = 355
Score = 35.8 bits (82), Expect = 0.007
Identities = 13/87 (14%), Positives = 31/87 (35%), Gaps = 12/87 (13%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V + W + +AV D L V ++ +++ +N ++ +
Sbjct: 243 VVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWIN------MKYFQSEWSLC 296
Query: 167 IWNEQYE------KLTSSDETGLIIVW 187
+ + K+ E+ L++VW
Sbjct: 297 NFKLSVDKHVRGCKIAWISESSLVVVW 323
Score = 33.1 bits (75), Expect = 0.054
Identities = 7/72 (9%), Positives = 20/72 (27%), Gaps = 5/72 (6%)
Query: 102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKE----STGQVAAANVNLAMNQSLQ 157
+ V ++Q+Q + + ++ + ++ + N
Sbjct: 17 HVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAF 75
Query: 158 GHSGKVRAIIWN 169
K IW+
Sbjct: 76 VTGVKEVVHIWD 87
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 35.4 bits (82), Expect = 0.008
Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 8/95 (8%)
Query: 20 DMWSLGVLLYILLSGVSPFLD-ESEEETRAHISVADYSFPPE-QCGHISVPARELIGQLL 77
D+WSLG+ + L P+ + + + P+ S + Q L
Sbjct: 239 DIWSLGITMIELAILRFPYDSWGTPFQQLKQVV---EEPSPQLPADKFSAEFVDFTSQCL 295
Query: 78 NTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAW 112
++ +RPT +L+Q +F + + ++
Sbjct: 296 KKNSKERPTYPELMQHPFFTLH---ESKGTDVASF 327
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta
transducin repeat all beta, signaling protein; 1.10A
{Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A
2i3s_A 2i3t_A
Length = 342
Score = 35.6 bits (82), Expect = 0.008
Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 13/75 (17%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
VN + + ++ G DG++ L T K+ + + + V I
Sbjct: 254 VNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK-------------IKNFAKFNEDSVVKI 300
Query: 167 IWNEQYEKLTSSDET 181
++ L +SD+T
Sbjct: 301 ACSDNILCLATSDDT 315
Score = 34.4 bits (79), Expect = 0.017
Identities = 10/80 (12%), Positives = 18/80 (22%), Gaps = 23/80 (28%)
Query: 107 VNCLAWHQNQGW-IAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
+ C + N I VG G + + L Q+L + +
Sbjct: 59 LLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF--------------QALTNNEANLGI 104
Query: 166 IIWNEQYEKLTSSDETGLII 185
+I
Sbjct: 105 CRI--------CKYGDDKLI 116
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 35.4 bits (82), Expect = 0.009
Identities = 20/95 (21%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 20 DMWSLGVLLYILLSGVSPFLD-ESEEETRAHISVADY-SFPPEQCGHISVPARELIGQLL 77
D+WSLG+ LY L +G P+ S + + D + S + L
Sbjct: 211 DVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCL 270
Query: 78 NTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAW 112
KRP +LL+ + V +
Sbjct: 271 TKDESKRPKYKELLKHPFILMY---EERAVEVACY 302
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 35.1 bits (81), Expect = 0.010
Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 26/59 (44%)
Query: 6 LKLIDLGSSA--------------------------GPSTDMWSLGVLLYILLSGVSPF 38
+K+ DLG++ G D+WS L++ L++G F
Sbjct: 177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 235
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller,
3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core
complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A*
2h6q_A* 3eg6_A 4erq_A 2h6n_A 2gnq_A 2xl2_A 2xl3_A
3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A
2h13_A 3p4f_A 4a7j_A* 2h9l_A ...
Length = 312
Score = 35.1 bits (82), Expect = 0.011
Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 18/83 (21%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
++ +AW + + DD LK+ + +GK ++L+GHS V
Sbjct: 68 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL--------------KTLKGHSNYVFCC 113
Query: 167 IWNEQYEKL--TSSDETGLIIVW 187
+N Q + S DE+ + +W
Sbjct: 114 NFNPQSNLIVSGSFDES--VRIW 134
Score = 32.8 bits (76), Expect = 0.061
Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 18/83 (21%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V+ + + N W+A D L+K+ GK +++ GH + +
Sbjct: 26 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--------------EKTISGHKLGISDV 71
Query: 167 IWNEQYEKLT--SSDETGLIIVW 187
W+ L S D+T + +W
Sbjct: 72 AWSSDSNLLVSASDDKT--LKIW 92
Score = 30.9 bits (71), Expect = 0.24
Identities = 12/63 (19%), Positives = 20/63 (31%), Gaps = 14/63 (22%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V+ + + N +I D LK+ GK ++ GH + I
Sbjct: 195 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL--------------KTYTGHKNEKYCI 240
Query: 167 IWN 169
N
Sbjct: 241 FAN 243
Score = 28.2 bits (64), Expect = 1.6
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 14/63 (22%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V C ++ I G D +++ + TGK ++L HS V A+
Sbjct: 110 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL--------------KTLPAHSDPVSAV 155
Query: 167 IWN 169
+N
Sbjct: 156 HFN 158
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor,
WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB:
2zkq_a
Length = 340
Score = 34.8 bits (81), Expect = 0.011
Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 10/61 (16%)
Query: 107 VNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
V +A I D + + KL + + G ++L+GHS V
Sbjct: 41 VTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQ---------RALRGHSHFVSD 91
Query: 166 I 166
+
Sbjct: 92 V 92
Score = 30.9 bits (71), Expect = 0.24
Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 16/62 (25%)
Query: 107 VNCLAWHQN--QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
V+C+ + N I G D L+KV L K + GH+G +
Sbjct: 174 VSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLK--------------TNHIGHTGYLN 219
Query: 165 AI 166
+
Sbjct: 220 TV 221
Score = 30.2 bits (69), Expect = 0.40
Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 15/72 (20%)
Query: 119 IAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKL--- 175
+ G D G + E + +L+GH+G V I Q+ +
Sbjct: 7 HSSGVDLGTENLYFQSMMTE-QMTLR---------GTLKGHNGWVTQIATTPQFPDMILS 56
Query: 176 TSSDETGLIIVW 187
S D+T II+W
Sbjct: 57 ASRDKT--IIMW 66
Score = 27.9 bits (63), Expect = 2.1
Identities = 8/63 (12%), Positives = 21/63 (33%), Gaps = 8/63 (12%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKL-DTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
+N L + N+ W+ + K+ D + ++ S + + +
Sbjct: 259 INALCFSPNRYWLCAATGPSI----KIWDL---EGKIIVDELKQEVISTSSKAEPPQCTS 311
Query: 166 IIW 168
+ W
Sbjct: 312 LAW 314
Score = 27.1 bits (61), Expect = 3.8
Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 14/60 (23%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V+ + + + G DG L++ L TG + + GH+ V ++
Sbjct: 89 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT--------------RRFVGHTKDVLSV 134
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40
repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Length = 425
Score = 34.9 bits (81), Expect = 0.011
Identities = 10/95 (10%), Positives = 25/95 (26%), Gaps = 20/95 (21%)
Query: 74 GQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKL 133
G ++ K + + + + W + + G G + V ++
Sbjct: 181 GTVMQHFELKETGGSSINAENH-----SGDGSLGVDVEWVDD-DKFVIPGPKGAIFVYQI 234
Query: 134 DTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIW 168
+ L GH G + + +
Sbjct: 235 TEKTPT--------------GKLIGHHGPISVLEF 255
Score = 33.0 bits (76), Expect = 0.059
Identities = 7/70 (10%), Positives = 25/70 (35%), Gaps = 7/70 (10%)
Query: 107 VNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANV------NLAMNQSLQGH 159
+ W+ +A G + + ++ ++ + + + A++ S
Sbjct: 48 IVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKT 107
Query: 160 SGKVRAIIWN 169
+ +V + W+
Sbjct: 108 TNQVTCLAWS 117
Score = 31.1 bits (71), Expect = 0.23
Identities = 12/83 (14%), Positives = 24/83 (28%), Gaps = 15/83 (18%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ Q+ AV DG + V L ++SL G+ +
Sbjct: 333 IFAGRISQDGQKYAVAFMDGQVNVYDLKKLNS-------------KSRSLYGNRDGILNP 379
Query: 167 IWNEQYEKL--TSSDETGLIIVW 187
+ Y + ++ + W
Sbjct: 380 LPIPLYASYQSSQDNDYIFDLSW 402
Score = 31.1 bits (71), Expect = 0.23
Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 19/83 (22%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V CLAW + I G ++G L++ TG + L H + ++
Sbjct: 111 VTCLAWSHDGNSIVTGVENGELRLW------NKTGALL---------NVLNFHRAPIVSV 155
Query: 167 IWNEQYEKL--TSSDETGLIIVW 187
WN+ + + I+W
Sbjct: 156 KWNKDGTHIISMDVENV--TILW 176
Score = 30.3 bits (69), Expect = 0.39
Identities = 10/62 (16%), Positives = 19/62 (30%), Gaps = 14/62 (22%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
++ L ++ + DDG L++ G GHS + +
Sbjct: 250 ISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQ--------------NCFYGHSQSIVSA 295
Query: 167 IW 168
W
Sbjct: 296 SW 297
Score = 27.6 bits (62), Expect = 3.0
Identities = 7/83 (8%), Positives = 27/83 (32%), Gaps = 4/83 (4%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKE-STGQVAAANVNLAMNQSLQGHSGKVRA 165
+ + W+++ I + + + + +G ++ + ++ G
Sbjct: 152 IVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVD 211
Query: 166 IIWNEQYEKLTSS-DETGLIIVW 187
+ W + + + I V+
Sbjct: 212 VEWVDDDKFVIPGPKGA--IFVY 232
Score = 27.2 bits (61), Expect = 4.4
Identities = 5/60 (8%), Positives = 13/60 (21%), Gaps = 15/60 (25%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ +W + + DG +++ L + A
Sbjct: 292 IVSASWVGD-DKVISCSMDGSVRLWSLKQNTLL--------------ALSIVDGVPIFAG 336
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 35.0 bits (81), Expect = 0.012
Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Query: 20 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 79
D+WSLG+ + G P D RA + P + S + I L
Sbjct: 216 DLWSLGITAIEMAEGAPPLCDM--HPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVK 273
Query: 80 HADKRPTAGQLLQ 92
+ +RP QL++
Sbjct: 274 NHSQRPATEQLMK 286
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 34.9 bits (81), Expect = 0.013
Identities = 26/123 (21%), Positives = 41/123 (33%), Gaps = 31/123 (25%)
Query: 11 LGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVA 53
+GS S D+WS G +L +++G F ++EE I +
Sbjct: 181 MGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLP 240
Query: 54 DYS--------------FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI 99
Y+ P + + + LL + D R +A Q L WFAE
Sbjct: 241 KYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEY 300
Query: 100 AIP 102
Sbjct: 301 YHH 303
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A,
receptor for activiated protein C-kinase 1,
beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia
coli}
Length = 694
Score = 35.0 bits (81), Expect = 0.014
Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 10/65 (15%)
Query: 103 NNTKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSG 161
+ V +A + I D + + KL ++ G + L GHS
Sbjct: 381 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQ---------RRLTGHSH 431
Query: 162 KVRAI 166
V +
Sbjct: 432 FVEDV 436
Score = 30.0 bits (68), Expect = 0.53
Identities = 15/62 (24%), Positives = 22/62 (35%), Gaps = 16/62 (25%)
Query: 107 VNCLAWHQN--QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
V+C+ + N Q I D +KV L K +L GH+G V
Sbjct: 520 VSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL--------------RSTLAGHTGYVS 565
Query: 165 AI 166
+
Sbjct: 566 TV 567
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein;
RACK1, WD40, beta propeller, ribosome, translation,
acetylation; 2.13A {Saccharomyces cerevisiae} PDB:
3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A
3jyv_R*
Length = 319
Score = 34.4 bits (80), Expect = 0.016
Identities = 14/61 (22%), Positives = 19/61 (31%), Gaps = 10/61 (16%)
Query: 107 VNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
V LA Q + D L KL + G +S +GHS V+
Sbjct: 20 VTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPV---------RSFKGHSHIVQD 70
Query: 166 I 166
Sbjct: 71 C 71
Score = 28.6 bits (65), Expect = 1.4
Identities = 9/66 (13%), Positives = 20/66 (30%), Gaps = 20/66 (30%)
Query: 107 VNCLAWHQNQG------WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHS 160
V+ + N+ I G+D ++K L+ + GH+
Sbjct: 151 VSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIE--------------ADFIGHN 196
Query: 161 GKVRAI 166
+ +
Sbjct: 197 SNINTL 202
Score = 27.1 bits (61), Expect = 4.4
Identities = 9/60 (15%), Positives = 17/60 (28%), Gaps = 14/60 (23%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V + + D L++ + TG+ Q GH V ++
Sbjct: 68 VQDCTLTADGAYALSASWDKTLRLWDVATGETY--------------QRFVGHKSDVMSV 113
Score = 27.1 bits (61), Expect = 4.4
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 145 AANVNLAMNQSLQGHSGKVRAIIWNEQYEKL---TSSDETGLIIVW 187
A+N L + +L+GH+G V ++ + L S D+T +I W
Sbjct: 2 ASNEVLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKT--LISW 45
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 34.7 bits (80), Expect = 0.016
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 20 DMWSLGVLLYILLSGVSPFLD-ESEEETRAHISVADYSFPPEQCGHI--SVPARELIGQL 76
D+WSLG+ L L +G P+ + +++ E + + PP GH+ S + +
Sbjct: 211 DVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE---PPLLPGHMGFSGDFQSFVKDC 267
Query: 77 LNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAW 112
L KRP +LL+ ++ +V+ +W
Sbjct: 268 LTKDHRKRPKYNKLLEHSFIKRY---ETLEVDVASW 300
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology
modeling,de novo modeling,ribos proteins,novel ribosomal
proteins, ribosome; 5.50A {Triticum aestivum}
Length = 305
Score = 34.5 bits (80), Expect = 0.017
Identities = 3/84 (3%), Positives = 11/84 (13%), Gaps = 12/84 (14%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ + + A + I
Sbjct: 111 TFTNQLQTSFSEPRLLILTDPRTDHQPIKESALGNIPTIA-------FCDTDSPMRYVDI 163
Query: 167 IW--NEQYEKLTSS-DETGLIIVW 187
N + ++ +
Sbjct: 164 GIPANNKGKQSIGCLFWL--LARM 185
Score = 31.0 bits (71), Expect = 0.23
Identities = 2/61 (3%), Positives = 8/61 (13%), Gaps = 14/61 (22%)
Query: 106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
+ + Q+ + + H+
Sbjct: 68 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH--------------AIAGRHTPGTFT 113
Query: 166 I 166
Sbjct: 114 N 114
Score = 29.5 bits (67), Expect = 0.77
Identities = 6/83 (7%), Positives = 17/83 (20%), Gaps = 19/83 (22%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ ++ GK + LQ + + AI
Sbjct: 28 HLGTKNCDF-QMERYVYKRRTDGIYIINLGKTW--------------EKLQLAARVIVAI 72
Query: 167 IWNEQYEKLT--SSDETGLIIVW 187
+ + + ++
Sbjct: 73 ENPQDIIVQSARPYGQR--AVLK 93
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit;
lissencephaly, platelet activacting factor, regulator of
cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Length = 410
Score = 34.5 bits (80), Expect = 0.018
Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 18/83 (21%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V + +H +I DD L+V + ++L H V ++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM--------------KTLNAHEHFVTSL 386
Query: 167 IWNEQYEKL--TSSDETGLIIVW 187
+++ + S D+T + VW
Sbjct: 387 DFHKTAPYVVTGSVDQT--VKVW 407
Score = 33.0 bits (76), Expect = 0.058
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 18/83 (21%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V + +H + +D +KV +TG ++L+GH+ V+ I
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--------------RTLKGHTDSVQDI 156
Query: 167 IWNEQYEKLT--SSDETGLIIVW 187
++ + L S+D T I +W
Sbjct: 157 SFDHSGKLLASCSADMT--IKLW 177
Score = 32.6 bits (75), Expect = 0.082
Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 18/83 (21%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V +++ + +A D +K+ + +++ GH V ++
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECI--------------RTMHGHDHNVSSV 198
Query: 167 IWNEQYEKLT--SSDETGLIIVW 187
+ + S D+T I +W
Sbjct: 199 SIMPNGDHIVSASRDKT--IKMW 219
Score = 29.9 bits (68), Expect = 0.55
Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 16/77 (20%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V + +Q+ IA +D ++V + T + L+ H V I
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECK--------------AELREHRHVVECI 282
Query: 167 IW--NEQYEKLTSSDET 181
W Y ++ + +
Sbjct: 283 SWAPESSYSSISEATGS 299
Score = 28.7 bits (65), Expect = 1.3
Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 18/83 (21%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V+ ++ N I D +K+ ++ TG ++ GH VR +
Sbjct: 195 VSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV--------------KTFTGHREWVRMV 240
Query: 167 IWNEQYEKL--TSSDETGLIIVW 187
N+ + S+D+T + VW
Sbjct: 241 RPNQDGTLIASCSNDQT--VRVW 261
Score = 26.0 bits (58), Expect = 8.8
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 154 QSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVW 187
+L GH V +I++ + + S+ E I VW
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVW 135
Score = 26.0 bits (58), Expect = 9.8
Identities = 17/98 (17%), Positives = 32/98 (32%), Gaps = 28/98 (28%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGK---------------ESTGQVAAANVNLA 151
V C++W + ++ G G STG
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL------- 331
Query: 152 MNQSLQGHSGKVRAIIWNEQYEKL--TSSDETGLIIVW 187
+L GH VR ++++ + + + D+T + VW
Sbjct: 332 --MTLVGHDNWVRGVLFHSGGKFILSCADDKT--LRVW 365
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic
cleavage, mRNA transport, nuclear pore complex, nucleus,
phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Length = 316
Score = 34.2 bits (79), Expect = 0.019
Identities = 13/67 (19%), Positives = 22/67 (32%), Gaps = 14/67 (20%)
Query: 107 VNCLAWHQNQG----WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGK 162
V +AW + G IA DG + + D +T + L +
Sbjct: 215 VRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSP----------KLLHKFNDV 264
Query: 163 VRAIIWN 169
V + W+
Sbjct: 265 VWHVSWS 271
Score = 34.2 bits (79), Expect = 0.023
Identities = 12/80 (15%), Positives = 23/80 (28%), Gaps = 20/80 (25%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
++ +A D +K+ + G + L+GH G V +
Sbjct: 16 IHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIA------------DLRGHEGPVWQV 63
Query: 167 IWNEQYEKLTSSDETGLIIV 186
W + G I+
Sbjct: 64 AW--------AHPMYGNILA 75
Score = 33.8 bits (78), Expect = 0.028
Identities = 23/141 (16%), Positives = 40/141 (28%), Gaps = 27/141 (19%)
Query: 76 LLNTHADKRPTAGQLLQ--------VAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGL 127
LL + + ++ V+W + + A GG D L
Sbjct: 131 LLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNL 190
Query: 128 LKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIW--NEQYEKLT----SSDET 181
+K+ K + + Q L+ HS VR + W + T S D
Sbjct: 191 IKLWKEEEDGQ-----------WKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGR 239
Query: 182 GLIIVWMLYKEKNPQDKLPPL 202
+ +W + L
Sbjct: 240 --VFIWTCDDASSNTWSPKLL 258
Score = 33.4 bits (77), Expect = 0.036
Identities = 15/82 (18%), Positives = 26/82 (31%), Gaps = 22/82 (26%)
Query: 107 VNCLAW-HQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
V +AW H G +A D + + + + G GH V
Sbjct: 60 VWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHE------------HAGHDSSVN 107
Query: 165 AIIWNEQYEKLTSSDETGLIIV 186
++ W + + GLI+
Sbjct: 108 SVCW--------APHDYGLILA 121
Score = 31.5 bits (72), Expect = 0.17
Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 13/65 (20%)
Query: 107 VNCLAW--HQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
VN + W H +A G DG + +L + + + H+
Sbjct: 106 VNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVK-----------KINNAHTIGCN 154
Query: 165 AIIWN 169
A+ W
Sbjct: 155 AVSWA 159
Score = 30.7 bits (70), Expect = 0.28
Identities = 7/62 (11%), Positives = 17/62 (27%), Gaps = 14/62 (22%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V ++W +AV G D + + K + + + ++
Sbjct: 265 VWHVSWSITANILAVSGGDNKVTLWKESVDGQW--------------VCISDVNKGQGSV 310
Query: 167 IW 168
Sbjct: 311 SA 312
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling
protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1
b.69.4.1
Length = 435
Score = 34.2 bits (79), Expect = 0.020
Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 15/81 (18%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V L + N G + D + V + + + + + + L GH V +
Sbjct: 216 VLHLRF--NNGMMVTCSKDRSIAVWDMASPTD-----------ITLRRVLVGHRAAVNVV 262
Query: 167 IWNEQYEKLTSSDETGLIIVW 187
++++Y S D T I VW
Sbjct: 263 DFDDKYIVSASGDRT--IKVW 281
Score = 32.7 bits (75), Expect = 0.063
Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 26/85 (30%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V CL + I G D +K+ +T + + L GH+G V +
Sbjct: 136 VYCLQYDDQ--KIVSGLRDNTIKIWDKNTLECK--------------RILTGHTGSVLCL 179
Query: 167 IWNEQYEKLT----SSDETGLIIVW 187
QY++ SSD T + VW
Sbjct: 180 ----QYDERVIITGSSDST--VRVW 198
Score = 32.3 bits (74), Expect = 0.092
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V C+ + + I G DG +KV L + + ++L HSG+V +
Sbjct: 339 VRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCL-----RTLVEHSGRVFRL 391
Query: 167 IWNEQYEKLTSSDETGLIIVW 187
++E +S D+T I++W
Sbjct: 392 QFDEFQIVSSSHDDT--ILIW 410
Score = 30.0 bits (68), Expect = 0.53
Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 18/81 (22%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
VN + + I D +KV T + ++L GH + +
Sbjct: 259 VNVVDFDDKY--IVSASGDRTIKVWNTSTCEF--------------VRTLNGHKRGIACL 302
Query: 167 IWNEQYEKLTSSDETGLIIVW 187
+ ++ SSD T I +W
Sbjct: 303 QYRDRLVVSGSSDNT--IRLW 321
Score = 28.8 bits (65), Expect = 1.2
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 22/84 (26%)
Query: 106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
+ CL + + G D +++ ++ G + L+GH VR
Sbjct: 298 GIACLQYRDRL--VVSGSSDNTIRLWDIECGACL--------------RVLEGHEELVRC 341
Query: 166 IIWNEQYEKLTS--SDETGLIIVW 187
I ++ + + S D I VW
Sbjct: 342 IRFDNKR--IVSGAYDGK--IKVW 361
Score = 26.5 bits (59), Expect = 6.6
Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 18/81 (22%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V CL + + I G D ++V ++TG+ +L H V +
Sbjct: 176 VLCLQYDER--VIITGSSDSTVRVWDVNTGEML--------------NTLIHHCEAVLHL 219
Query: 167 IWNEQYEKLTSSDETGLIIVW 187
+N S D + I VW
Sbjct: 220 RFNNGMMVTCSKDRS--IAVW 238
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 34.2 bits (79), Expect = 0.022
Identities = 11/66 (16%), Positives = 20/66 (30%), Gaps = 26/66 (39%)
Query: 6 LKLIDLGSSA--------------------------GPSTDMWSLGVLLYILLSGVSPFL 39
+++ D GS+ D+WS+G +L+ G + F
Sbjct: 181 IRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 240
Query: 40 DESEEE 45
E
Sbjct: 241 THENRE 246
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 33.9 bits (78), Expect = 0.024
Identities = 15/66 (22%), Positives = 24/66 (36%), Gaps = 26/66 (39%)
Query: 6 LKLIDLGSSA--------------------------GPSTDMWSLGVLLYILLSGVSPFL 39
+K++D GSS + DMWSLG +L + +G F
Sbjct: 200 IKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 259
Query: 40 DESEEE 45
+E +
Sbjct: 260 GANEVD 265
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional
CO-repressor, WD40, transcription repressor, WD repeat;
1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Length = 337
Score = 34.0 bits (79), Expect = 0.027
Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 15/60 (25%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ L + W+AVG + ++VL ++ + L H V ++
Sbjct: 227 IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ---------------LHLHESCVLSL 271
Score = 29.4 bits (67), Expect = 0.87
Identities = 8/60 (13%), Positives = 17/60 (28%), Gaps = 12/60 (20%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ + + VGG+ L + L T ++ L + A+
Sbjct: 100 IRSCKLLPDGCTLIVGGEASTLSIWDLAAP---TPRIK---------AELTSSAPACYAL 147
Score = 27.1 bits (61), Expect = 4.0
Identities = 10/60 (16%), Positives = 13/60 (21%), Gaps = 15/60 (25%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V L + W G D LL + G S V +
Sbjct: 268 VLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS---------------IFQSKESSSVLSC 312
Score = 26.7 bits (60), Expect = 5.9
Identities = 10/60 (16%), Positives = 14/60 (23%), Gaps = 14/60 (23%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
LA + DG + V L + QGH+ I
Sbjct: 144 CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV--------------RQFQGHTDGASCI 189
>3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin
NUP145; protein complex, cytoplasmic vesicle,
endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Length = 379
Score = 33.8 bits (78), Expect = 0.028
Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 23/75 (30%)
Query: 107 VNCLAWH-------------QNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMN 153
VN +W + GG D L+K+ K ++ + T +
Sbjct: 150 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ-TYVLE--------- 199
Query: 154 QSLQGHSGKVRAIIW 168
+L+GHS VR + W
Sbjct: 200 STLEGHSDWVRDVAW 214
Score = 31.9 bits (73), Expect = 0.11
Identities = 7/66 (10%), Positives = 16/66 (24%), Gaps = 12/66 (18%)
Query: 107 VNCLAWHQNQG---WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKV 163
V +AW ++A D + D + + + +
Sbjct: 209 VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLK---------EEKFPDVL 259
Query: 164 RAIIWN 169
W+
Sbjct: 260 WRASWS 265
Score = 31.1 bits (71), Expect = 0.24
Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 22/82 (26%)
Query: 107 VNCLAW-HQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
V + W H G +A DG + + K + G+ + HS V
Sbjct: 58 VWRVDWAHPKFGTILASCSYDGKVLIWKEENGR------------WSQIAVHAVHSASVN 105
Query: 165 AIIWNEQYEKLTSSDETGLIIV 186
++ W + E G +++
Sbjct: 106 SVQW--------APHEYGPLLL 119
Score = 29.6 bits (67), Expect = 0.72
Identities = 11/65 (16%), Positives = 23/65 (35%), Gaps = 14/65 (21%)
Query: 107 VNCLAW--HQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
VN + W H+ + V DG + V++ ++ + + H+ V
Sbjct: 104 VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII------------IDAHAIGVN 151
Query: 165 AIIWN 169
+ W
Sbjct: 152 SASWA 156
Score = 28.4 bits (64), Expect = 1.7
Identities = 12/80 (15%), Positives = 27/80 (33%), Gaps = 20/80 (25%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
++ +A D +K+ +++ T ++ +L GH G V +
Sbjct: 14 IHDAVLDYYGKRLATCSSDKTIKIFEVEGE---THKLI---------DTLTGHEGPVWRV 61
Query: 167 IWNEQYEKLTSSDETGLIIV 186
W + + G I+
Sbjct: 62 DW--------AHPKFGTILA 73
Score = 26.9 bits (60), Expect = 5.8
Identities = 11/92 (11%), Positives = 23/92 (25%), Gaps = 17/92 (18%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGK--ESTGQVAAANVN--------------- 149
+ +W + +A+ G D + + K + E G+V
Sbjct: 259 LWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEVHQGGGGSGGGGATSKEFDGPC 318
Query: 150 LAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET 181
L E+ ++ T
Sbjct: 319 QNEIDLLFSECNDEIDNAKLIMKERRFTASYT 350
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 33.8 bits (78), Expect = 0.029
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 19 TDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPAR--ELIG 74
+D+WS G+LL+ G SP+ + S ++TR + P PE C P L+
Sbjct: 296 SDVWSFGILLWETFSLGASPYPNLSNQQTREFVE-KGGRLPCPELC-----PDAVFRLME 349
Query: 75 QLLNTHADKRPTAGQLLQ 92
Q +RP+ + Q
Sbjct: 350 QCWAYEPGQRPSFSTIYQ 367
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double
phosphorylation, transcription-C complex; HET: TPO;
2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB:
2ovp_B* 2ovq_B*
Length = 445
Score = 33.8 bits (78), Expect = 0.031
Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 18/81 (22%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V C+ H+ + G D L+V ++TG+ L GH VR +
Sbjct: 202 VRCMHLHEK--RVVSGSRDATLRVWDIETGQCL--------------HVLMGHVAAVRCV 245
Query: 167 IWNEQYEKLTSSDETGLIIVW 187
++ + + D + VW
Sbjct: 246 QYDGRRVVSGAYDFM--VKVW 264
Score = 33.4 bits (77), Expect = 0.040
Identities = 20/79 (25%), Positives = 28/79 (35%), Gaps = 20/79 (25%)
Query: 111 AWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE 170
I G DD LKV TGK ++L GH+G V + +
Sbjct: 124 CLQFCGNRIVSGSDDNTLKVWSAVTGKCL--------------RTLVGHTGGVWSSQMRD 169
Query: 171 QYEKLT--SSDETGLIIVW 187
+ S+D T + VW
Sbjct: 170 N--IIISGSTDRT--LKVW 184
Score = 31.9 bits (73), Expect = 0.14
Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 18/81 (22%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V C+ + + G D ++KV +T +LQGH+ +V ++
Sbjct: 242 VRCVQYDGR--RVVSGAYDFMVKVWDPETETC--------------LHTLQGHTNRVYSL 285
Query: 167 IWNEQYEKLTSSDETGLIIVW 187
++ + S D + I VW
Sbjct: 286 QFDGIHVVSGSLDTS--IRVW 304
Score = 30.7 bits (70), Expect = 0.27
Identities = 21/81 (25%), Positives = 29/81 (35%), Gaps = 18/81 (22%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V N I G D LKV +TG+ +L GH+ VR +
Sbjct: 162 VWSSQMRDN--IIISGSTDRTLKVWNAETGECI--------------HTLYGHTSTVRCM 205
Query: 167 IWNEQYEKLTSSDETGLIIVW 187
+E+ S D T + VW
Sbjct: 206 HLHEKRVVSGSRDAT--LRVW 224
Score = 28.0 bits (63), Expect = 2.3
Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 22/83 (26%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V L + + G D ++V ++TG +L GH +
Sbjct: 282 VYSLQFDGIH--VVSGSLDTSIRVWDVETGNCI--------------HTLTGHQSLTSGM 325
Query: 167 IWNEQYEKLTS--SDETGLIIVW 187
+ L S +D T + +W
Sbjct: 326 ELKDNI--LVSGNADST--VKIW 344
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 33.4 bits (77), Expect = 0.036
Identities = 16/66 (24%), Positives = 21/66 (31%), Gaps = 26/66 (39%)
Query: 6 LKLIDLGSSA--------------------------GPSTDMWSLGVLLYILLSGVSPFL 39
+KLID G + S+DMWS G +L L +G F
Sbjct: 201 IKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260
Query: 40 DESEEE 45
E
Sbjct: 261 THEHME 266
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A
{Saccharomyces cerevisiae}
Length = 369
Score = 33.3 bits (77), Expect = 0.036
Identities = 10/84 (11%), Positives = 20/84 (23%), Gaps = 17/84 (20%)
Query: 106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
W +I G DG + + E S+ H +
Sbjct: 177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNNYE-------------YVDSIDLHEKSISD 223
Query: 166 IIWNEQYEKL--TSSDETGLIIVW 187
+ ++ +S D +
Sbjct: 224 MQFSPDLTYFITSSRDTN--SFLV 245
Score = 28.0 bits (63), Expect = 2.4
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGK 137
+N +A A GG+DG +++ +
Sbjct: 318 LNTVAISPQGTSYASGGEDGFIRLHHFEKSY 348
Score = 26.4 bits (59), Expect = 6.6
Identities = 14/90 (15%), Positives = 25/90 (27%), Gaps = 18/90 (20%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKE---------STGQVAAANVNLAMNQSLQ 157
+N + +I +GG V + + +Q
Sbjct: 262 LNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEI---------GRVQ 312
Query: 158 GHSGKVRAIIWNEQYEKLTSSDETGLIIVW 187
GH G + + + Q S E G I +
Sbjct: 313 GHFGPLNTVAISPQGTSYASGGEDGFIRLH 342
Score = 26.4 bits (59), Expect = 6.9
Identities = 8/63 (12%), Positives = 20/63 (31%), Gaps = 14/63 (22%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ + +++ + D V G+ +L GH+G + +I
Sbjct: 35 LTQVKYNKEGDLLFSCSKDSSASVWYSLNGERL--------------GTLDGHTGTIWSI 80
Query: 167 IWN 169
+
Sbjct: 81 DVD 83
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31;
beta propeller, alpha solenoid; 2.35A {Saccharomyces
cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Length = 297
Score = 33.0 bits (76), Expect = 0.045
Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 23/75 (30%)
Query: 107 VNCLAWH-------------QNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMN 153
VN +W + GG D L+K+ K ++ + T +
Sbjct: 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ-TYVLE--------- 197
Query: 154 QSLQGHSGKVRAIIW 168
+L+GHS VR + W
Sbjct: 198 STLEGHSDWVRDVAW 212
Score = 30.7 bits (70), Expect = 0.28
Identities = 11/65 (16%), Positives = 23/65 (35%), Gaps = 14/65 (21%)
Query: 107 VNCLAW--HQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
VN + W H+ + V DG + V++ ++ + + H+ V
Sbjct: 102 VNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPII------------IDAHAIGVN 149
Query: 165 AIIWN 169
+ W
Sbjct: 150 SASWA 154
Score = 29.9 bits (68), Expect = 0.48
Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 22/82 (26%)
Query: 107 VNCLAW-HQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
V + W H G +A DG + + K + G+ + HS V
Sbjct: 56 VWRVDWAHPKFGTILASCSYDGKVMIWKEENGR------------WSQIAVHAVHSASVN 103
Query: 165 AIIWNEQYEKLTSSDETGLIIV 186
++ W + E G +++
Sbjct: 104 SVQW--------APHEYGPMLL 117
Score = 27.2 bits (61), Expect = 3.5
Identities = 12/80 (15%), Positives = 27/80 (33%), Gaps = 20/80 (25%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
++ +A D +K+ +++ T ++ +L GH G V +
Sbjct: 12 IHDAVMDYYGKRMATCSSDKTIKIFEVEGE---THKLID---------TLTGHEGPVWRV 59
Query: 167 IWNEQYEKLTSSDETGLIIV 186
W + + G I+
Sbjct: 60 DW--------AHPKFGTILA 71
Score = 26.4 bits (59), Expect = 7.6
Identities = 5/32 (15%), Positives = 14/32 (43%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKE 138
+ +W + +A+ G D + + K + +
Sbjct: 257 LWRASWSLSGNVLALSGGDNKVTLWKENLEGK 288
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40
beta-barrel fold, DNA D DNA repair, HOST-virus
interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB:
3ei4_B*
Length = 435
Score = 33.1 bits (76), Expect = 0.046
Identities = 11/61 (18%), Positives = 17/61 (27%), Gaps = 13/61 (21%)
Query: 107 VNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
LAWH +AVG G + + + T G G +
Sbjct: 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTF------------IKGIGAGGSITG 169
Query: 166 I 166
+
Sbjct: 170 L 170
Score = 32.0 bits (73), Expect = 0.13
Identities = 10/63 (15%), Positives = 19/63 (30%), Gaps = 15/63 (23%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
L + + G + G + +L +D + L+ H KV +
Sbjct: 212 FCSLDVSASSRMVVTGDNVGNVILLNMDGKELWN---------------LRMHKKKVTHV 256
Query: 167 IWN 169
N
Sbjct: 257 ALN 259
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 33.0 bits (76), Expect = 0.050
Identities = 12/66 (18%), Positives = 21/66 (31%), Gaps = 26/66 (39%)
Query: 6 LKLIDLGSSA--------------------------GPSTDMWSLGVLLYILLSGVSPFL 39
+K++D GS+ D+WS+G +L G + F
Sbjct: 176 IKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFP 235
Query: 40 DESEEE 45
+E
Sbjct: 236 THDSKE 241
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 32.7 bits (75), Expect = 0.055
Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 20 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA--RELIGQLL 77
D++S G++LY L++G P+ + + + Y+ P + + P + L+ +
Sbjct: 219 DVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCV 278
Query: 78 NTHADKRPTAGQLLQV 93
++RP Q+L
Sbjct: 279 KKVKEERPLFPQILSS 294
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 32.6 bits (75), Expect = 0.059
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 13/81 (16%)
Query: 20 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLN 78
D+WS GVLL+ LL+G PF +++ + P P C P +L+ N
Sbjct: 196 DVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTC---PEPFAKLMEDCWN 252
Query: 79 THADKRPTAGQLLQVAWFAEI 99
RP+ F I
Sbjct: 253 PDPHSRPS---------FTNI 264
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer
signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP:
b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B*
1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A
3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B*
3sn6_B*
Length = 340
Score = 32.5 bits (75), Expect = 0.068
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 13/82 (15%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V A+ + ++A GG D + + L T + N+ +++ L GH+G +
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREG----------NVRVSRELAGHTGYLSCC 149
Query: 167 IWNEQYEKLTSS-DETGLIIVW 187
+ + + +TSS D T +W
Sbjct: 150 RFLDDNQIVTSSGDTT--CALW 169
Score = 32.1 bits (74), Expect = 0.10
Identities = 8/61 (13%), Positives = 16/61 (26%), Gaps = 14/61 (22%)
Query: 106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
K+ + W + + DG L + T + ++ S V
Sbjct: 57 KIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKV--------------HAIPLRSSWVMT 102
Query: 166 I 166
Sbjct: 103 C 103
Score = 28.6 bits (65), Expect = 1.2
Identities = 11/60 (18%), Positives = 17/60 (28%), Gaps = 14/60 (23%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V L+ + G D K+ + G Q+ GH + AI
Sbjct: 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCR--------------QTFTGHESDINAI 232
Score = 27.9 bits (63), Expect = 2.4
Identities = 9/60 (15%), Positives = 23/60 (38%), Gaps = 15/60 (25%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
++C + + I D + ++TG+++ + GH+G V ++
Sbjct: 146 LSCCRFLDD-NQIVTSSGDTTCALWDIETGQQT--------------TTFTGHTGDVMSL 190
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics,
structural genomic consortium, SGC, apoptosis,
transcription; 1.95A {Homo sapiens}
Length = 357
Score = 32.7 bits (75), Expect = 0.069
Identities = 12/87 (13%), Positives = 24/87 (27%), Gaps = 17/87 (19%)
Query: 107 VNCLAWH---QNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKV 163
V L + + + +G V + T + G + S + H V
Sbjct: 212 VCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFA---------SVSEKAHKSTV 262
Query: 164 RAIIWNEQYEKL---TSSDETGLIIVW 187
+ Q +L + +W
Sbjct: 263 WQVRHLPQNRELFLTAGGAGG--LHLW 287
Score = 31.9 bits (73), Expect = 0.11
Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 11/90 (12%)
Query: 107 VNCLAWH-QNQGWIAVGGDDGLLKVLKLDTGKE-----STGQVAAANVNLAMNQSLQGHS 160
V + QN+ G G L + K + + S G ++++ Q++ +
Sbjct: 262 VWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLST 321
Query: 161 GKVRAIIWNEQYEKL---TSSDETGLIIVW 187
+ ++ W+ L +S D+T + V
Sbjct: 322 QPISSLDWSPDKRGLCVCSSFDQT--VRVL 349
Score = 31.6 bits (72), Expect = 0.15
Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 13/62 (20%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
A Q ++A G G L + L+ + S++GH + AI
Sbjct: 71 GTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPV-------------YSVKGHKEIINAI 117
Query: 167 IW 168
Sbjct: 118 DG 119
Score = 26.9 bits (60), Expect = 4.7
Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 22/86 (25%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
A++Q + + G D+G +K+ L + V ++
Sbjct: 171 AFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL---------------RWETNIKNGVCSL 215
Query: 167 IWN---EQYEKL--TSSDETGLIIVW 187
++ KL TS + V+
Sbjct: 216 EFDRKDISMNKLVATSLEGK--FHVF 239
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS
domain, DEP domain, DHEX domain, GGL domain, propeller,
signaling protein; 1.95A {Mus musculus}
Length = 354
Score = 32.5 bits (75), Expect = 0.072
Identities = 11/61 (18%), Positives = 19/61 (31%), Gaps = 14/61 (22%)
Query: 106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
KV C+ W +++ I DG + V T + ++ V A
Sbjct: 66 KVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKE--------------HAVTMPCTWVMA 111
Query: 166 I 166
Sbjct: 112 C 112
Score = 32.1 bits (74), Expect = 0.10
Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 14/84 (16%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGK-ESTGQVAAANVNLAMNQSLQGHSGKVRA 165
V A+ + IA GG D V L K E+ +S+ H+ + A
Sbjct: 109 VMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK---------KSVAMHTNYLSA 159
Query: 166 IIWNEQYEKLTSS--DETGLIIVW 187
+ ++ ++ D T +W
Sbjct: 160 CSFTNSDMQILTASGDGT--CALW 181
Score = 28.7 bits (65), Expect = 1.5
Identities = 13/80 (16%), Positives = 25/80 (31%), Gaps = 22/80 (27%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
++ ++ + I DG + +++G+ QS GH V +
Sbjct: 157 LSACSFTNSDMQILTASGDGTCALWDVESGQLL--------------QSFHGHGADVLCL 202
Query: 167 IWNEQYEKLTSSDETGLIIV 186
+ ETG V
Sbjct: 203 DL--------APSETGNTFV 214
Score = 28.3 bits (64), Expect = 2.0
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 133 LDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS--SDETGLIIVW 187
++ + + A + ++L+GH KV + W + ++ S D +IVW
Sbjct: 37 VELHQVAERVEALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGK--VIVW 91
Score = 26.7 bits (60), Expect = 5.8
Identities = 11/62 (17%), Positives = 20/62 (32%), Gaps = 16/62 (25%)
Query: 107 VNCLAWHQNQG--WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
V CL ++ GG D V + +G+ Q+ + H V
Sbjct: 199 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCV--------------QAFETHESDVN 244
Query: 165 AI 166
++
Sbjct: 245 SV 246
Score = 26.4 bits (59), Expect = 7.8
Identities = 8/60 (13%), Positives = 18/60 (30%), Gaps = 14/60 (23%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ + + + + G +D + V + G L GH +V +
Sbjct: 287 ASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR--------------VSILFGHENRVSTL 332
>3jro_A Fusion protein of protein transport protein SEC13 and nucleoporin
NUP145; protein complex, cytoplasmic vesicle,
endoplasmic reticulum, ER-golgi transport, membrane,
mRNA transport; 4.00A {Saccharomyces cerevisiae}
Length = 753
Score = 32.6 bits (74), Expect = 0.081
Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 23/75 (30%)
Query: 107 VNCLAWH-------------QNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMN 153
VN +W + GG D L+K+ K ++ T +
Sbjct: 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSD-AQTYVLE--------- 197
Query: 154 QSLQGHSGKVRAIIW 168
+L+GHS VR + W
Sbjct: 198 STLEGHSDWVRDVAW 212
Score = 31.5 bits (71), Expect = 0.20
Identities = 7/66 (10%), Positives = 16/66 (24%), Gaps = 12/66 (18%)
Query: 107 VNCLAWHQNQG---WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKV 163
V +AW ++A D + D + + + +
Sbjct: 207 VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLL---------KEEKFPDVL 257
Query: 164 RAIIWN 169
W+
Sbjct: 258 WRASWS 263
Score = 30.3 bits (68), Expect = 0.41
Identities = 14/113 (12%), Positives = 31/113 (27%), Gaps = 31/113 (27%)
Query: 107 VNCLAW--HQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
VN + W H+ + V DG + V++ ++ + + H+ V
Sbjct: 102 VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII------------IDAHAIGVN 149
Query: 165 AIIWNEQYEKLT---------------SSDETGLIIVWMLYKEKNPQDKLPPL 202
+ W + +D + +W + L
Sbjct: 150 SASWAPATIEEDGEHNGTKESRKFVTGGADNL--VKIWKYNSDAQTYVLESTL 200
Score = 28.0 bits (62), Expect = 2.7
Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 22/82 (26%)
Query: 107 VNCLAW-HQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
V + W H G +A DG + + K + G+ + HS V
Sbjct: 56 VWRVDWAHPKFGTILASCSYDGKVLIWKEENGR------------WSQIAVHAVHSASVN 103
Query: 165 AIIWNEQYEKLTSSDETGLIIV 186
++ W + E G +++
Sbjct: 104 SVQW--------APHEYGPLLL 117
Score = 26.1 bits (57), Expect = 10.0
Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 12/62 (19%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
++ +A D +K+ +++ T ++ +L GH G V +
Sbjct: 12 IHDAVLDYYGKRLATCSSDKTIKIFEVEGE---THKL---------IDTLTGHEGPVWRV 59
Query: 167 IW 168
W
Sbjct: 60 DW 61
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone,
RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Length = 420
Score = 32.2 bits (74), Expect = 0.094
Identities = 12/83 (14%), Positives = 25/83 (30%), Gaps = 18/83 (21%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+G +G +KVL + + + Q H ++ +
Sbjct: 100 TAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQR--------------EIDQAHVSEITKL 145
Query: 167 IWNEQYEKL--TSSDETGLIIVW 187
+ E L +S D + +W
Sbjct: 146 KFFPSGEALISSSQDMQ--LKIW 166
Score = 31.8 bits (73), Expect = 0.12
Identities = 12/97 (12%), Positives = 33/97 (34%), Gaps = 17/97 (17%)
Query: 74 GQLLNTHADKRPTAGQLLQVAWF----AEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLK 129
G ++T K + +A F ++ + +K N L + ++ G G++
Sbjct: 213 GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVIT 272
Query: 130 VLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V + + +++ Q + ++
Sbjct: 273 VHNVFSKEQTI-------------QLPSKFTCSCNSL 296
Score = 29.9 bits (68), Expect = 0.51
Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 13/61 (21%)
Query: 107 VNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
N L N +I G ++G+L L + + G+ L +
Sbjct: 293 CNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEF------------LINEGTPINN 340
Query: 166 I 166
+
Sbjct: 341 V 341
Score = 28.0 bits (63), Expect = 2.4
Identities = 10/63 (15%), Positives = 18/63 (28%), Gaps = 14/63 (22%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ L + + + D LK+ + G ++L GH V I
Sbjct: 142 ITKLKFFPSGEALISSSQDMQLKIWSVKDGSNP--------------RTLIGHRATVTDI 187
Query: 167 IWN 169
Sbjct: 188 AII 190
Score = 27.2 bits (61), Expect = 3.8
Identities = 8/84 (9%), Positives = 24/84 (28%), Gaps = 9/84 (10%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+N + + G D +K+ + S + + L + V
Sbjct: 338 INNVYFAAG-ALFVSSGFDTSIKLDII-----SDPESERPAIEFETPTFLVSNDDAVSQF 391
Query: 167 IW---NEQYEKLTSSDETGLIIVW 187
+ +E ++ + ++
Sbjct: 392 CYVSDDESNGEVLEVGKNNFCALY 415
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 31.9 bits (73), Expect = 0.099
Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 11/80 (13%)
Query: 20 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 79
D+++LG + Y L + PF + E + P + +++
Sbjct: 225 DVFALGTIWYELHAREWPFKTQPAEAIIW--QMGTGMKPNLSQIGMGKEISDILLFCWAF 282
Query: 80 HADKRPTAGQLLQVAWFAEI 99
++RPT F ++
Sbjct: 283 EQEERPT---------FTKL 293
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 31.9 bits (73), Expect = 0.11
Identities = 15/73 (20%), Positives = 30/73 (41%)
Query: 20 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 79
D +S ++LY +L+G PF + S + + + + P R +I +
Sbjct: 210 DTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSG 269
Query: 80 HADKRPTAGQLLQ 92
KRP +++
Sbjct: 270 DPKKRPHFSYIVK 282
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide
complex, E3 ubiquitin ligase, cell cycle, phospho
binding protein, phosphorylation; HET: SEP; 2.31A
{Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Length = 464
Score = 32.2 bits (74), Expect = 0.11
Identities = 23/94 (24%), Positives = 33/94 (35%), Gaps = 17/94 (18%)
Query: 107 VNCL--AWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMN---------QS 155
V CL ++N +I G D L V KL + L +
Sbjct: 206 VRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 265
Query: 156 LQGHSGKVRAIIWNEQYEKL--TSSDETGLIIVW 187
L+GH VR + + + S D T +IVW
Sbjct: 266 LRGHMASVRTVSGHGNI--VVSGSYDNT--LIVW 295
Score = 30.7 bits (70), Expect = 0.30
Identities = 11/50 (22%), Positives = 17/50 (34%), Gaps = 14/50 (28%)
Query: 117 GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
++ G DD +++V K L GH G V A+
Sbjct: 133 NYVITGADDKMIRVYDSINKKFL--------------LQLSGHDGGVWAL 168
Score = 29.9 bits (68), Expect = 0.64
Identities = 13/84 (15%), Positives = 31/84 (36%), Gaps = 20/84 (23%)
Query: 106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
++ + + D +++ L+ G+ +LQGH+ V
Sbjct: 312 RIYSTIYDHERKRCISASMDTTIRIWDLENGELM--------------YTLQGHTALVGL 357
Query: 166 IIWNEQYEKLTS--SDETGLIIVW 187
+ ++++ L S +D + I W
Sbjct: 358 LRLSDKF--LVSAAADGS--IRGW 377
Score = 28.8 bits (65), Expect = 1.2
Identities = 6/82 (7%), Positives = 26/82 (31%), Gaps = 15/82 (18%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
++ + I V G + + L +GK ++ ++ + ++ ++
Sbjct: 394 SAITTFYVS-DNILVSGSENQFNIYNLRSGKL-------------VHANILKDADQIWSV 439
Query: 167 IWNEQYEKLTSSDETGLII-VW 187
+ + + + +
Sbjct: 440 NFKGKTLVAAVEKDGQSFLEIL 461
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 32.0 bits (73), Expect = 0.12
Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 18 STDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 76
+D+WS G+LL L + G P+ E + P +C +L+ Q
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQC 417
Query: 77 LNTHADKRPTAGQLLQV 93
++RPT L
Sbjct: 418 WRKEPEERPTFEYLQAF 434
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 31.8 bits (72), Expect = 0.13
Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 18 STDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 76
+D+WS G+LL L + G P+ E + P +C +L+ Q
Sbjct: 444 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQC 500
Query: 77 LNTHADKRPTAGQLLQV 93
++RPT L
Sbjct: 501 WRKEPEERPTFEYLQAF 517
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB:
2xzn_R
Length = 343
Score = 31.4 bits (72), Expect = 0.15
Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+N +A++ W+AVG D G+ K+ L T + + + +G + + ++
Sbjct: 258 INQIAFNPKLQWVAVGTDQGV-KIFNLMTQSK-APVCTIEAEPITKAEGQKGKNPQCTSL 315
Query: 167 IW 168
W
Sbjct: 316 AW 317
Score = 29.9 bits (68), Expect = 0.58
Identities = 10/66 (15%), Positives = 23/66 (34%), Gaps = 13/66 (19%)
Query: 107 VNCLAWHQNQG------WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHS 160
V + +Q + G D + + KL +++ +++L GH+
Sbjct: 24 VTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIP-------HKALTGHN 76
Query: 161 GKVRAI 166
V +
Sbjct: 77 HFVSDL 82
Score = 29.1 bits (66), Expect = 1.1
Identities = 14/84 (16%), Positives = 27/84 (32%), Gaps = 21/84 (25%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
VN L+ N +IA GG D L + + Q + I
Sbjct: 216 VNHLSISPNGKYIATGGKDKKLLIWDILNLTYP--------------QREFDAGSTINQI 261
Query: 167 IW--NEQYEKLTS-SDETGLIIVW 187
+ Q+ + +D+ + ++
Sbjct: 262 AFNPKLQW--VAVGTDQG--VKIF 281
Score = 26.0 bits (58), Expect = 9.4
Identities = 12/60 (20%), Positives = 20/60 (33%), Gaps = 14/60 (23%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V+ LA Q + D L++ L TG + GH +V ++
Sbjct: 79 VSDLALSQENCFAISSSWDKTLRLWDLRTGTTY--------------KRFVGHQSEVYSV 124
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 31.6 bits (72), Expect = 0.16
Identities = 11/91 (12%), Positives = 30/91 (32%), Gaps = 18/91 (19%)
Query: 20 DMWSLGVLLYILLSGVSPFLDES------EEETRAHISVADY-----------SFPPEQC 62
D+W+ G++L+ + + + S D + P
Sbjct: 205 DIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWF 264
Query: 63 GHISVPA-RELIGQLLNTHADKRPTAGQLLQ 92
++ + +L+ + + R TA ++ +
Sbjct: 265 SDPTLTSLAKLMKECWYQNPSARLTALRIKK 295
>3ow8_A WD repeat-containing protein 61; structural genomics consortium,
SGC, transcriptio; 2.30A {Homo sapiens}
Length = 321
Score = 31.3 bits (72), Expect = 0.17
Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 16/64 (25%)
Query: 107 VNCLAW----HQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGK 162
+ +AW +N + G D L+KV K + SL+GH
Sbjct: 35 IWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQ------------WSLEGHQLG 82
Query: 163 VRAI 166
V ++
Sbjct: 83 VVSV 86
Score = 30.9 bits (71), Expect = 0.22
Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 18/83 (21%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ L + + + DDG +K+ + + +L GH+ V +
Sbjct: 209 IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA--------------GTLSGHASWVLNV 254
Query: 167 IWNEQYEKLT--SSDETGLIIVW 187
+ SSD++ + VW
Sbjct: 255 AFCPDDTHFVSSSSDKS--VKVW 275
Score = 30.5 bits (70), Expect = 0.33
Identities = 7/60 (11%), Positives = 16/60 (26%), Gaps = 14/60 (23%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V + A D +++ L+ GK+ +S+ +
Sbjct: 83 VVSVDISHTLPIAASSSLDAHIRLWDLENGKQI--------------KSIDAGPVDAWTL 128
Score = 28.6 bits (65), Expect = 1.3
Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 14/60 (23%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
LA+ + ++A G G + + +++GK+ SL + +I
Sbjct: 125 AWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE--------------YSLDTRGKFILSI 170
Score = 28.2 bits (64), Expect = 1.9
Identities = 12/60 (20%), Positives = 28/60 (46%), Gaps = 14/60 (23%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ +A+ + ++A G DG++ + + TGK +L+GH+ +R++
Sbjct: 167 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLL--------------HTLEGHAMPIRSL 212
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 31.7 bits (72), Expect = 0.18
Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Query: 19 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
+D+W+ GVLL+ + + G+SP+ + + PE C EL+
Sbjct: 400 SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC---PEKVYELMRACW 456
Query: 78 NTHADKRPTAGQLLQV 93
+ RP+ ++ Q
Sbjct: 457 QWNPSDRPSFAEIHQA 472
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 31.2 bits (71), Expect = 0.23
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 19 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQL 76
+D+WS G+LL+ + S G P+ ++ + Y P+ C +++
Sbjct: 367 SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGC---PPAVYDVMKNC 422
Query: 77 LNTHADKRPTAGQLLQV 93
+ A RPT QL +
Sbjct: 423 WHLDAATRPTFLQLREQ 439
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 31.0 bits (70), Expect = 0.24
Identities = 18/123 (14%), Positives = 37/123 (30%), Gaps = 42/123 (34%)
Query: 16 GPSTDMWSLGV-------------------LLYILLSGVSPFLDESEEETRAHISVADYS 56
+D++S+G+ +L L+G P L ++ ++++
Sbjct: 215 DAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSR 274
Query: 57 FPPEQCGHISVPA-----------------------RELIGQLLNTHADKRPTAGQLLQV 93
S+ + Q L + D RP+A LL
Sbjct: 275 SVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334
Query: 94 AWF 96
++F
Sbjct: 335 SFF 337
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 30.3 bits (69), Expect = 0.40
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 20 DMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 62
D+WS GV+++ +L+ G P+ + + + + + Y P P C
Sbjct: 236 DVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE-EGYRLPAPMGC 279
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 29.9 bits (68), Expect = 0.50
Identities = 20/121 (16%), Positives = 35/121 (28%), Gaps = 29/121 (23%)
Query: 11 LGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS------------------ 51
LG GP D+W G ++ + + +E+ A IS
Sbjct: 201 LGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYE 260
Query: 52 -VADYSFPP-------EQCGHISVP--ARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI 101
++ A +LI +LL +R + L +F +
Sbjct: 261 LYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPM 320
Query: 102 P 102
P
Sbjct: 321 P 321
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 29.5 bits (67), Expect = 0.58
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 20 DMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 62
D+W+ GVL++ + S G P+ + ET HI+ P
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYRPHLA 246
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 30.0 bits (68), Expect = 0.58
Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 26/125 (20%)
Query: 11 LGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEE------------TRAHI-----SV 52
G++ + D+WS G ++ L+ G F ES + +R I +
Sbjct: 214 FGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNY 273
Query: 53 ADYSFPPEQ--------CGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNN 104
++ FP + A +LI +LL R TA + L +F E+
Sbjct: 274 MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGEA 333
Query: 105 TKVNC 109
N
Sbjct: 334 RMPNG 338
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 29.1 bits (64), Expect = 0.59
Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 12/35 (34%)
Query: 170 EQYEKLTSSDETGLIIVWMLYKEKNPQDKLPPLML 204
+ +KL +S L LY D P L +
Sbjct: 20 QALKKLQAS----L----KLYA---D-DSAPALAI 42
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 29.7 bits (67), Expect = 0.61
Identities = 9/91 (9%), Positives = 32/91 (35%), Gaps = 18/91 (19%)
Query: 20 DMWSLGVLLYILLSGVSPFLDESE------EETRAHISVADY-----------SFPPEQC 62
D++++G++ + + S + + + SV + + P
Sbjct: 200 DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQ 259
Query: 63 GHISVPA-RELIGQLLNTHADKRPTAGQLLQ 92
++ +++ + + R TA ++ +
Sbjct: 260 SCEALRVMAKIMRECWYANGAARLTALRIKK 290
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 29.6 bits (67), Expect = 0.66
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 20 DMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 62
D+WS G++L+ ++S G P+ + S ++ + Y P P C
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-EGYRLPPPMDC 275
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 29.5 bits (67), Expect = 0.68
Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 20 DMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 62
D+W+ G+L++ + S G P+ + E +S + P
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS-QGHRLYRPHLA 230
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 29.6 bits (67), Expect = 0.68
Identities = 15/76 (19%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 20 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA--RELIGQLL 77
D+++ G++LY L++G P+ + + + + P + P + L+ + L
Sbjct: 207 DVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECL 266
Query: 78 NTHADKRPTAGQLLQV 93
D+RP+ ++L
Sbjct: 267 KKKRDERPSFPRILAE 282
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 29.6 bits (67), Expect = 0.70
Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 13/81 (16%)
Query: 20 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLN 78
D++S GV+L+ L + P+ + + + A + P + +I
Sbjct: 221 DVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNL---NPQVAAIIEGCWT 277
Query: 79 THADKRPTAGQLLQVAWFAEI 99
KRP+ FA I
Sbjct: 278 NEPWKRPS---------FATI 289
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription
inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP:
b.69.4.1
Length = 393
Score = 29.5 bits (67), Expect = 0.71
Identities = 19/116 (16%), Positives = 44/116 (37%), Gaps = 20/116 (17%)
Query: 74 GQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKL 133
G L+ +D +A + ++ + + + + ++A G +D L+++ +
Sbjct: 95 GSLVARLSD--DSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDI 152
Query: 134 DTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLT--SSDETGLIIVW 187
+ K LQGH + ++ + +KL S D T + +W
Sbjct: 153 ENRKIV--------------MILQGHEQDIYSLDYFPSGDKLVSGSGDRT--VRIW 192
Score = 29.1 bits (66), Expect = 1.1
Identities = 8/60 (13%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V + + ++ + G D +K+ L + + + GH V ++
Sbjct: 259 VYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCE--VTYIGHKDFVLSV 316
Score = 28.7 bits (65), Expect = 1.2
Identities = 16/89 (17%), Positives = 23/89 (25%), Gaps = 24/89 (26%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
V +A QN +I G D + +G LQGH V ++
Sbjct: 313 VLSVATTQNDEYILSGSKDRGVLFWDKKSGNPL--------------LMLQGHRNSVISV 358
Query: 167 IWNEQYEKLT--------SSDETGLIIVW 187
S D +W
Sbjct: 359 AVANGSSLGPEYNVFATGSGDCK--ARIW 385
Score = 26.4 bits (59), Expect = 6.4
Identities = 3/60 (5%), Positives = 10/60 (16%), Gaps = 7/60 (11%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
+ + + L + + H+ V +
Sbjct: 18 IPPFLLDLDSQSVPDALKKQTNDYYILYNPA--LPREIDVEL-----HKSLDHTSVVCCV 70
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 29.4 bits (66), Expect = 0.76
Identities = 13/74 (17%), Positives = 23/74 (31%)
Query: 12 GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
G+ +D+WS+G+ L + G P +E E P R
Sbjct: 204 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263
Query: 72 LIGQLLNTHADKRP 85
L +++
Sbjct: 264 LNKFGMDSRPPMAI 277
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 29.4 bits (66), Expect = 0.78
Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 8/76 (10%)
Query: 20 DMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR--ELIGQL 76
D+W GV ++ +L GV PF + I + P C P L+ +
Sbjct: 574 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC-----PPTLYSLMTKC 628
Query: 77 LNTHADKRPTAGQLLQ 92
+RP +L
Sbjct: 629 WAYDPSRRPRFTELKA 644
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 29.1 bits (66), Expect = 0.79
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 20 DMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 62
D+WS GVL++ + S G P+ + S E IS + P
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLYKPRLA 230
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 29.1 bits (66), Expect = 0.79
Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 12/87 (13%)
Query: 20 DMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPAR--ELIGQ 75
D+WS GVL++ S G P+ E A + P C P +L+
Sbjct: 202 DVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-KGERMGCPAGC-----PREMYDLMNL 255
Query: 76 LLNTHADKRPTAGQLLQV--AWFAEIA 100
+ RP + ++ ++
Sbjct: 256 CWTYDVENRPGFAAVELRLRNYYYDVV 282
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 29.2 bits (66), Expect = 0.83
Identities = 15/82 (18%), Positives = 33/82 (40%), Gaps = 14/82 (17%)
Query: 20 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP--PEQCGHISVPARELIGQLL 77
D++S G++L+ +++ PF + R +V + + P + P L+ +
Sbjct: 185 DVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK---PIESLMTRCW 241
Query: 78 NTHADKRPTAGQLLQVAWFAEI 99
+ +RP+ EI
Sbjct: 242 SKDPSQRPS---------MEEI 254
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 29.4 bits (66), Expect = 0.89
Identities = 9/91 (9%), Positives = 32/91 (35%), Gaps = 18/91 (19%)
Query: 20 DMWSLGVLLYILLSGVSPFLDESE------EETRAHISVADY-----------SFPPEQC 62
D++++G++ + + S + + + SV + + P
Sbjct: 239 DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQ 298
Query: 63 GHISVPA-RELIGQLLNTHADKRPTAGQLLQ 92
++ +++ + + R TA ++ +
Sbjct: 299 SCEALRVMAKIMRECWYANGAARLTALRIKK 329
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 29.3 bits (66), Expect = 1.00
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 20 DMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLL 77
D+WS G+LL +++ G P+ S E + Y P PE C ++ +
Sbjct: 367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYRMPRPENC---PEELYNIMMRCW 422
Query: 78 NTHADKRPTAGQLLQV 93
++RPT + V
Sbjct: 423 KNRPEERPTFEYIQSV 438
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 29.1 bits (66), Expect = 1.0
Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 20 DMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 62
D+WS G+LL+ + S G P+ ++ + Y P+ C
Sbjct: 196 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGC 239
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 28.7 bits (65), Expect = 1.0
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 20 DMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPAR--ELIGQ 75
D+W+ GVLL+ + + G+SP+ + + DY PE C P + EL+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEGC-----PEKVYELMRA 247
Query: 76 LLNTHADKRPTAGQLLQV 93
+ RP+ ++ Q
Sbjct: 248 CWQWNPSDRPSFAEIHQA 265
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 29.0 bits (65), Expect = 1.0
Identities = 22/136 (16%), Positives = 40/136 (29%), Gaps = 44/136 (32%)
Query: 11 LGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD--------------- 54
LG+ + D+W++G + LL+ F E+ ++ D
Sbjct: 208 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADK 267
Query: 55 ----------------------------YSFPPEQCGHISVPARELIGQLLNTHADKRPT 86
+ + A L+ +LL KR T
Sbjct: 268 DWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRIT 327
Query: 87 AGQLLQVAWFAEIAIP 102
+ Q +Q +F E +P
Sbjct: 328 SEQAMQDPYFLEDPLP 343
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 29.1 bits (65), Expect = 1.1
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 20 DMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 62
D+WS GV ++ LS G P+ E A I P +C
Sbjct: 521 DVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-QGKRMECPPEC 564
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 28.7 bits (65), Expect = 1.1
Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 20 DMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 62
D+WS G+LL +++ G P+ + E ++ Y P+ C
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNC 235
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 28.8 bits (65), Expect = 1.1
Identities = 19/78 (24%), Positives = 27/78 (34%), Gaps = 10/78 (12%)
Query: 20 DMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPAR--ELIGQ 75
D+WS GV ++ LS G P+ E A I P +C P L+
Sbjct: 195 DVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-QGKRMECPPEC-----PPELYALMSD 248
Query: 76 LLNTHADKRPTAGQLLQV 93
+ RP + Q
Sbjct: 249 CWIYKWEDRPDFLTVEQR 266
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 28.9 bits (65), Expect = 1.2
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 19 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQL 76
TD WS GVLL+ + S G P+ +S +E + + P+ C P ++ Q
Sbjct: 267 TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV-TSGGRMDPPKNC---PGPVYRIMTQC 322
Query: 77 LNTHADKRPTAGQLLQ 92
+ RP +L+
Sbjct: 323 WQHQPEDRPNFAIILE 338
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 28.9 bits (65), Expect = 1.3
Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 26/119 (21%)
Query: 11 LGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEE------------TRAHI-----SV 52
G++ S D+WS G +L LL G F +S + TR I +
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288
Query: 53 ADYSFPPEQ--------CGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPN 103
++ FP + A L +LL R T + ++F E+ PN
Sbjct: 289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 347
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 28.8 bits (65), Expect = 1.3
Identities = 23/128 (17%), Positives = 39/128 (30%), Gaps = 29/128 (22%)
Query: 11 LGSSA-GPSTDMWSLGVLLYILLSGVSPF--------LDE--------SEEETRAHIS-V 52
G+ + D+WS+G + ++ G F L E S E R
Sbjct: 204 FGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSH 263
Query: 53 ADYSFP-----------PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI 101
D + + A +L+ LL ++R + L +F E+
Sbjct: 264 TDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323
Query: 102 PNNTKVNC 109
P N
Sbjct: 324 PATKLPNN 331
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 28.5 bits (64), Expect = 1.5
Identities = 15/91 (16%), Positives = 30/91 (32%), Gaps = 18/91 (19%)
Query: 20 DMWSLGVLLYILLSGVSPFLDESE------EETRAHISVADY-----------SFPPEQC 62
DM+S G++L+ + E + + S D SFP
Sbjct: 234 DMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWS 293
Query: 63 GHISVPA-RELIGQLLNTHADKRPTAGQLLQ 92
+ +L+ + + R TA ++ +
Sbjct: 294 SDECLRQMGKLMTECWAHNPASRLTALRVKK 324
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha
isoform; holoenzyme, PR55, WD repeat, hydrolase, iron,
manganese binding, methylation, phosphoprotein, protein
phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Length = 447
Score = 28.6 bits (63), Expect = 1.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 104 NTKVNCLAWHQNQGWIAVGGDDGL 127
N K+ AWH + IAV + L
Sbjct: 416 NKKILHTAWHPKENIIAVATTNNL 439
Score = 27.8 bits (61), Expect = 2.5
Identities = 14/100 (14%), Positives = 36/100 (36%), Gaps = 15/100 (15%)
Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH------- 159
++ + ++ + +A G G + + + + + + QS +
Sbjct: 31 ISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSL 90
Query: 160 --SGKVRAIIWNEQYEK----LTSSDETGLIIVWMLYKEK 193
K+ I W Q L+++D+T I +W + +
Sbjct: 91 EIEEKINKIRWLPQKNAAQFLLSTNDKT--IKLWKISERD 128
Score = 27.8 bits (61), Expect = 2.7
Identities = 5/42 (11%), Positives = 16/42 (38%)
Query: 108 NCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVN 149
W+ + + G + ++ +T ++ T + + N
Sbjct: 346 FECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNK 387
>1k32_A Tricorn protease; protein degradation, substrate gating, serine
protease, beta propeller, proteasome, hydrolase; 2.00A
{Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1
b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Length = 1045
Score = 28.6 bits (63), Expect = 1.6
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 97 AEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKEST 140
AE N V + +N + V D + + L+TGK +
Sbjct: 371 AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTV 414
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 28.4 bits (64), Expect = 1.6
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 20 DMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 62
D+WS G++++ +++ G P+ + S E I+ + P P C
Sbjct: 232 DVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN-DGFRLPTPMDC 275
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 28.4 bits (64), Expect = 1.7
Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 19 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
+D+W+ GV ++ + + G++P+ E ++ PE C E++
Sbjct: 230 SDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDC---LDELYEIMYSCW 286
Query: 78 NTHADKRPTAGQLLQ 92
T RPT L
Sbjct: 287 RTDPLDRPTFSVLRL 301
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 28.1 bits (63), Expect = 1.8
Identities = 14/75 (18%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 19 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
+D+W+ GV ++ +++ G +P+ E ++ + P +C +L+ Q
Sbjct: 220 SDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPEC---MEEVYDLMYQCW 276
Query: 78 NTHADKRPTAGQLLQ 92
+ +RP+ L
Sbjct: 277 SADPKQRPSFTCLRM 291
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 28.2 bits (63), Expect = 2.1
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 19 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQC 62
+D+WS GVLL+ L++ G P+ D + + ++ PE C
Sbjct: 277 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 321
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 28.0 bits (63), Expect = 2.2
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Query: 19 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR--ELIGQ 75
TD WS GVLL+ + S G P+ +S +E ++ PP+ C P ++ Q
Sbjct: 226 TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC-----PGPVYRIMTQ 280
Query: 76 LLNTHADKRPTAGQLLQ 92
+ RP +L+
Sbjct: 281 CWQHQPEDRPNFAIILE 297
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 27.8 bits (62), Expect = 2.3
Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 19/92 (20%)
Query: 20 DMWSLGVLLYILLSGVSPFLDESEE-------ETRAHISVADY-----------SFPPEQ 61
DM+++G++L+ L S + +E E H S+ D
Sbjct: 220 DMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYW 279
Query: 62 CGHISVPA-RELIGQLLNTHADKRPTAGQLLQ 92
H + E I + + A+ R +AG + +
Sbjct: 280 QKHAGMAMLCETIEECWDHDAEARLSAGCVGE 311
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 28.0 bits (63), Expect = 2.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 18 STDMWSLGVLLYILLSGVSPF 38
S DMWSLG +L ++ PF
Sbjct: 211 SLDMWSLGCMLASMIFRKEPF 231
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 27.6 bits (62), Expect = 2.6
Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 10/78 (12%)
Query: 19 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPAR--ELIG 74
+D+WS GV+L+ + + G P+ S E I+ P C P ++
Sbjct: 241 SDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT-QGRELERPRAC-----PPEVYAIMR 294
Query: 75 QLLNTHADKRPTAGQLLQ 92
+R + +
Sbjct: 295 GCWQREPQQRHSIKDVHA 312
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 27.6 bits (62), Expect = 2.8
Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 19 TDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
+D+WS GV+L+ I P+ S E+ + P+ C EL+
Sbjct: 221 SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC---PDMLFELMRMCW 277
Query: 78 NTHADKRPTAGQLLQ 92
+ RP+ +++
Sbjct: 278 QYNPKMRPSFLEIIS 292
>3ipq_A Oxysterols receptor LXR-alpha; LXR homodimer, LXR signaling,
alternative DNA-binding, metal-binding, nucleus,
polymorphism, receptor transcription; HET: 965; 2.00A
{Homo sapiens} PDB: 3ips_A* 3ipu_A* 3fc6_B* 3fal_B*
1uhl_B* 2acl_B* 1upv_A* 1upw_A* 1p8d_A* 1pq9_A* 1pq6_A*
1pqc_A* 3kfc_A* 4dk7_A* 4dk8_A* 3l0e_A*
Length = 283
Score = 27.4 bits (61), Expect = 2.9
Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 1/75 (1%)
Query: 41 ESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHAD-KRPTAGQLLQVAWFAEI 99
+ EE+ A S PP+ +S +I +L+ R + L+V +
Sbjct: 18 QEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPMA 77
Query: 100 AIPNNTKVNCLAWHQ 114
P++ + +
Sbjct: 78 PDPHSREARQQRFAH 92
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 27.6 bits (62), Expect = 3.1
Identities = 18/78 (23%), Positives = 27/78 (34%), Gaps = 10/78 (12%)
Query: 20 DMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPAR--ELIGQ 75
D+W GV ++ +L GV PF + I P P C P L+ +
Sbjct: 199 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNC-----PPTLYSLMTK 252
Query: 76 LLNTHADKRPTAGQLLQV 93
+RP +L
Sbjct: 253 CWAYDPSRRPRFTELKAQ 270
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 27.6 bits (62), Expect = 3.1
Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 20 DMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 62
D W GV L+ + + G P++ + + I P PE C
Sbjct: 206 DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 250
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 27.2 bits (61), Expect = 3.3
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 19 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQC 62
+D+WS GVLL+ L++ G P+ D + + ++ PE C
Sbjct: 213 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 257
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 27.3 bits (61), Expect = 3.3
Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 8/77 (10%)
Query: 19 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQL 76
TD WS G L+ + S G P + + P P+ LI
Sbjct: 199 TDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE-DRHQLPAPKAA-----ELANLINNC 252
Query: 77 LNTHADKRPTAGQLLQV 93
++ D RP+ +++
Sbjct: 253 MDYEPDHRPSFRAIIRD 269
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 27.3 bits (61), Expect = 3.4
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 69 ARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPN 103
A +L+ +LL + +KR +A L+ + + PN
Sbjct: 305 ALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPN 339
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 27.3 bits (61), Expect = 4.0
Identities = 14/84 (16%), Positives = 32/84 (38%), Gaps = 18/84 (21%)
Query: 20 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS--FPPEQCGHISVPA--RELIGQ 75
D++S G++L ++ V+ D ++V + + P C P + +
Sbjct: 204 DVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNC-----PPSFFPITVR 258
Query: 76 LLNTHADKRPTAGQLLQVAWFAEI 99
+ +KRP+ F ++
Sbjct: 259 CCDLDPEKRPS---------FVKL 273
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 26.8 bits (60), Expect = 4.5
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 19 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 62
+D+WS GV+L+ + S G+ P+ S ++ I P P+ C
Sbjct: 211 SDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR-NRQVLPCPDDC 255
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 26.8 bits (60), Expect = 4.5
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 19 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQC 62
+D+WS GVLL+ LL+ G P+ + ++ PE C
Sbjct: 209 SDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYC 253
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 26.9 bits (60), Expect = 5.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 69 ARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPN 103
A +L+ ++L DKR TA Q L +F P
Sbjct: 282 AADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPE 316
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 26.8 bits (60), Expect = 5.6
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 19 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQC 62
+D+WS GV+L+ + + G P+ S E I+ P C
Sbjct: 216 SDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVC 260
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 26.5 bits (59), Expect = 5.8
Identities = 10/33 (30%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 19 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHI 50
+D+W+ GV+L+ + S G+ P+ + EE ++
Sbjct: 257 SDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYV 289
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 26.4 bits (59), Expect = 6.3
Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 20 DMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 62
D+W V ++ +LS G PF ++ + P P+ C
Sbjct: 196 DVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE-KGDRLPKPDLC 239
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 26.4 bits (59), Expect = 7.4
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 19 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 62
+D+WS GV ++ L++ G P+ E + + P P C
Sbjct: 200 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-KGERLPQPPIC 244
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 26.4 bits (58), Expect = 8.2
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Query: 19 TDMWSLGVLLY-ILLSGVSP 37
+D+WS GVLL+ I G SP
Sbjct: 276 SDVWSFGVLLWEIFSLGASP 295
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 26.0 bits (58), Expect = 8.7
Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 19 TDMWSLGVLLYILLSGVSPFLDESEEE 45
+D++S GV+L +++G+ +DE E
Sbjct: 215 SDIYSFGVVLLEIITGLPA-VDEHREP 240
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 26.2 bits (58), Expect = 9.2
Identities = 9/25 (36%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 20 DMWSLGVLLYILLS-GVSPFLDESE 43
D+WS GV+LY L + +E
Sbjct: 212 DVWSFGVVLYELFTYCDKSCSPSAE 236
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 26.1 bits (58), Expect = 9.3
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 20 DMWSLGVLLYILLS-GVSPFLDESEEETRAHI 50
D+WS GV ++ L++ G P+ E + +
Sbjct: 201 DVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.315 0.133 0.400
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,085,731
Number of extensions: 171988
Number of successful extensions: 1113
Number of sequences better than 10.0: 1
Number of HSP's gapped: 866
Number of HSP's successfully gapped: 493
Length of query: 205
Length of database: 6,701,793
Length adjustment: 89
Effective length of query: 116
Effective length of database: 4,216,824
Effective search space: 489151584
Effective search space used: 489151584
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.1 bits)