BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14045
(287 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CKJ|A Chain A, Human Milk Xanthine Oxidoreductase
pdb|2CKJ|B Chain B, Human Milk Xanthine Oxidoreductase
pdb|2CKJ|C Chain C, Human Milk Xanthine Oxidoreductase
pdb|2CKJ|D Chain D, Human Milk Xanthine Oxidoreductase
Length = 1333
Score = 305 bits (782), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 140/240 (58%), Positives = 179/240 (74%), Gaps = 2/240 (0%)
Query: 35 ACSKLNERLKPYKEKNPTGKWQDWVKAAFFDRTSLAATGYFKTPDIGYDMKKNEGAIFNY 94
AC + +RL+PYK+KNP+G W+DWV AA+ D SL+ATG+++TP++GY + N G F+Y
Sbjct: 1094 ACQTILKRLEPYKKKNPSGSWEDWVTAAYMDTVSLSATGFYRTPNLGYSFETNSGNPFHY 1153
Query: 95 FGYGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQVEGAFMQGYGLYVMEELM 154
F YG + SEVEIDCLTGDH+ T+IVMDVG SLNPAID+GQVEGAF+QG GL+ +EEL
Sbjct: 1154 FSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELH 1213
Query: 155 FSPSGVLYTRGPGTYKIPGFADIPAEFNVSLLKGAPNPRAVYSSKAVGEPPLLLASSVYF 214
+SP G L+TRGP TYKIP F IP EF VSLL+ PN +A+Y+SKAVGEPPL LA+S++F
Sbjct: 1214 YSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKKAIYASKAVGEPPLFLAASIFF 1273
Query: 215 AIRDAIDAYRKQELGR--EDYYRLDSPATPAKIRLLCEDSITKEFPAPEPGSYKPWNISI 272
AI+DAI A R Q G ++ +RLDSPATP KIR C D T P + KPW++ +
Sbjct: 1274 AIKDAIRAARAQHTGNNVKELFRLDSPATPEKIRNACVDKFTTLCVTGVPENCKPWSVRV 1333
>pdb|2E1Q|A Chain A, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
pdb|2E1Q|B Chain B, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
pdb|2E1Q|C Chain C, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
pdb|2E1Q|D Chain D, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
Length = 1333
Score = 305 bits (782), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 140/240 (58%), Positives = 179/240 (74%), Gaps = 2/240 (0%)
Query: 35 ACSKLNERLKPYKEKNPTGKWQDWVKAAFFDRTSLAATGYFKTPDIGYDMKKNEGAIFNY 94
AC + +RL+PYK+KNP+G W+DWV AA+ D SL+ATG+++TP++GY + N G F+Y
Sbjct: 1094 ACQTILKRLEPYKKKNPSGSWEDWVTAAYMDTVSLSATGFYRTPNLGYSFETNSGNPFHY 1153
Query: 95 FGYGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQVEGAFMQGYGLYVMEELM 154
F YG + SEVEIDCLTGDH+ T+IVMDVG SLNPAID+GQVEGAF+QG GL+ +EEL
Sbjct: 1154 FSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELH 1213
Query: 155 FSPSGVLYTRGPGTYKIPGFADIPAEFNVSLLKGAPNPRAVYSSKAVGEPPLLLASSVYF 214
+SP G L+TRGP TYKIP F IP EF VSLL+ PN +A+Y+SKAVGEPPL LA+S++F
Sbjct: 1214 YSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKKAIYASKAVGEPPLFLAASIFF 1273
Query: 215 AIRDAIDAYRKQELGR--EDYYRLDSPATPAKIRLLCEDSITKEFPAPEPGSYKPWNISI 272
AI+DAI A R Q G ++ +RLDSPATP KIR C D T P + KPW++ +
Sbjct: 1274 AIKDAIRAARAQHTGNNVKELFRLDSPATPEKIRNACVDKFTTLCVTGVPENCKPWSVRV 1333
>pdb|3UNA|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nad Bound
pdb|3UNA|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nad Bound
pdb|3UNC|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase To
1.65a Resolution
pdb|3UNC|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase To
1.65a Resolution
pdb|3UNI|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nadh Bound
pdb|3UNI|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nadh Bound
Length = 1332
Score = 304 bits (779), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 139/241 (57%), Positives = 178/241 (73%), Gaps = 2/241 (0%)
Query: 34 DACSKLNERLKPYKEKNPTGKWQDWVKAAFFDRTSLAATGYFKTPDIGYDMKKNEGAIFN 93
+AC + +RL+P+K+KNP G W+DWV AA+ DR SL+ TG+++TP++GY + N G F+
Sbjct: 1092 EACQTILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFH 1151
Query: 94 YFGYGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQVEGAFMQGYGLYVMEEL 153
YF YG + SEVEIDCLTGDH+ T+IVMDVG SLNPAID+GQVEGAF+QG GL+ +EEL
Sbjct: 1152 YFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEEL 1211
Query: 154 MFSPSGVLYTRGPGTYKIPGFADIPAEFNVSLLKGAPNPRAVYSSKAVGEPPLLLASSVY 213
+SP G L+TRGP TYKIP F IP EF VSLL+ PN +A+Y+SKAVGEPPL L +SV+
Sbjct: 1212 HYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVF 1271
Query: 214 FAIRDAIDAYRKQELGR--EDYYRLDSPATPAKIRLLCEDSITKEFPAPEPGSYKPWNIS 271
FAI+DAI A R Q ++ +RLDSPATP KIR C D T PG+ KPW++
Sbjct: 1272 FAIKDAIRAARAQHTNNNTKELFRLDSPATPEKIRNACVDKFTTLCVTGAPGNCKPWSLR 1331
Query: 272 I 272
+
Sbjct: 1332 V 1332
>pdb|1FO4|A Chain A, Crystal Structure Of Xanthine Dehydrogenase Isolated From
Bovine Milk
pdb|1FO4|B Chain B, Crystal Structure Of Xanthine Dehydrogenase Isolated From
Bovine Milk
pdb|1V97|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase
Fyx-051 Bound Form
pdb|1V97|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase
Fyx-051 Bound Form
pdb|1VDV|A Chain A, Bovine Milk Xanthine Dehydrogenase Y-700 Bound Form
pdb|1VDV|B Chain B, Bovine Milk Xanthine Dehydrogenase Y-700 Bound Form
pdb|3BDJ|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
A Covalently Bound Oxipurinol Inhibitor
pdb|3BDJ|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
A Covalently Bound Oxipurinol Inhibitor
pdb|3AM9|A Chain A, Complex Of Bovine Xanthine Dehydrogenase And Trihydroxy
Fyx-051
pdb|3AM9|B Chain B, Complex Of Bovine Xanthine Dehydrogenase And Trihydroxy
Fyx-051
pdb|3AMZ|A Chain A, Bovine Xanthine Oxidoreductase Urate Bound Form
pdb|3AMZ|B Chain B, Bovine Xanthine Oxidoreductase Urate Bound Form
pdb|3AX7|A Chain A, Bovine Xanthine Oxidase, Protease Cleaved Form
pdb|3AX7|B Chain B, Bovine Xanthine Oxidase, Protease Cleaved Form
pdb|3AX9|A Chain A, Bovine Xanthone Oxidase, Protease Cleaved Form
pdb|3AX9|B Chain B, Bovine Xanthone Oxidase, Protease Cleaved Form
Length = 1332
Score = 304 bits (779), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 139/241 (57%), Positives = 178/241 (73%), Gaps = 2/241 (0%)
Query: 34 DACSKLNERLKPYKEKNPTGKWQDWVKAAFFDRTSLAATGYFKTPDIGYDMKKNEGAIFN 93
+AC + +RL+P+K+KNP G W+DWV AA+ DR SL+ TG+++TP++GY + N G F+
Sbjct: 1092 EACQTILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFH 1151
Query: 94 YFGYGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQVEGAFMQGYGLYVMEEL 153
YF YG + SEVEIDCLTGDH+ T+IVMDVG SLNPAID+GQVEGAF+QG GL+ +EEL
Sbjct: 1152 YFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEEL 1211
Query: 154 MFSPSGVLYTRGPGTYKIPGFADIPAEFNVSLLKGAPNPRAVYSSKAVGEPPLLLASSVY 213
+SP G L+TRGP TYKIP F IP EF VSLL+ PN +A+Y+SKAVGEPPL L +SV+
Sbjct: 1212 HYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVF 1271
Query: 214 FAIRDAIDAYRKQELGR--EDYYRLDSPATPAKIRLLCEDSITKEFPAPEPGSYKPWNIS 271
FAI+DAI A R Q ++ +RLDSPATP KIR C D T PG+ KPW++
Sbjct: 1272 FAIKDAIRAARAQHTNNNTKELFRLDSPATPEKIRNACVDKFTTLCVTGAPGNCKPWSLR 1331
Query: 272 I 272
+
Sbjct: 1332 V 1332
>pdb|3EUB|C Chain C, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|L Chain L, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|U Chain U, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|4 Chain 4, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
Length = 762
Score = 304 bits (778), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 139/241 (57%), Positives = 178/241 (73%), Gaps = 2/241 (0%)
Query: 34 DACSKLNERLKPYKEKNPTGKWQDWVKAAFFDRTSLAATGYFKTPDIGYDMKKNEGAIFN 93
+AC + +RL+P+K+KNP G W+DWV AA+ DR SL+ TG+++TP++GY + N G F+
Sbjct: 522 EACQTILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFH 581
Query: 94 YFGYGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQVEGAFMQGYGLYVMEEL 153
YF YG + SEVEIDCLTGDH+ T+IVMDVG SLNPAID+GQVEGAF+QG GL+ +EEL
Sbjct: 582 YFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEEL 641
Query: 154 MFSPSGVLYTRGPGTYKIPGFADIPAEFNVSLLKGAPNPRAVYSSKAVGEPPLLLASSVY 213
+SP G L+TRGP TYKIP F IP EF VSLL+ PN +A+Y+SKAVGEPPL L +SV+
Sbjct: 642 HYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVF 701
Query: 214 FAIRDAIDAYRKQELGR--EDYYRLDSPATPAKIRLLCEDSITKEFPAPEPGSYKPWNIS 271
FAI+DAI A R Q ++ +RLDSPATP KIR C D T PG+ KPW++
Sbjct: 702 FAIKDAIRAARAQHTNNNTKELFRLDSPATPEKIRNACVDKFTTLCVTGAPGNCKPWSLR 761
Query: 272 I 272
+
Sbjct: 762 V 762
>pdb|1N5X|A Chain A, Xanthine Dehydrogenase From Bovine Milk With Inhibitor Tei-
6720 Bound
pdb|1N5X|B Chain B, Xanthine Dehydrogenase From Bovine Milk With Inhibitor Tei-
6720 Bound
Length = 1331
Score = 304 bits (778), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 139/241 (57%), Positives = 178/241 (73%), Gaps = 2/241 (0%)
Query: 34 DACSKLNERLKPYKEKNPTGKWQDWVKAAFFDRTSLAATGYFKTPDIGYDMKKNEGAIFN 93
+AC + +RL+P+K+KNP G W+DWV AA+ DR SL+ TG+++TP++GY + N G F+
Sbjct: 1091 EACQTILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFH 1150
Query: 94 YFGYGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQVEGAFMQGYGLYVMEEL 153
YF YG + SEVEIDCLTGDH+ T+IVMDVG SLNPAID+GQVEGAF+QG GL+ +EEL
Sbjct: 1151 YFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEEL 1210
Query: 154 MFSPSGVLYTRGPGTYKIPGFADIPAEFNVSLLKGAPNPRAVYSSKAVGEPPLLLASSVY 213
+SP G L+TRGP TYKIP F IP EF VSLL+ PN +A+Y+SKAVGEPPL L +SV+
Sbjct: 1211 HYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVF 1270
Query: 214 FAIRDAIDAYRKQELGR--EDYYRLDSPATPAKIRLLCEDSITKEFPAPEPGSYKPWNIS 271
FAI+DAI A R Q ++ +RLDSPATP KIR C D T PG+ KPW++
Sbjct: 1271 FAIKDAIRAARAQHTNNNTKELFRLDSPATPEKIRNACVDKFTTLCVTGAPGNCKPWSLR 1330
Query: 272 I 272
+
Sbjct: 1331 V 1331
>pdb|1FIQ|C Chain C, Crystal Structure Of Xanthine Oxidase From Bovine Milk
pdb|3B9J|C Chain C, Structure Of Xanthine Oxidase With
2-Hydroxy-6-Methylpurine
pdb|3B9J|K Chain K, Structure Of Xanthine Oxidase With
2-Hydroxy-6-Methylpurine
Length = 763
Score = 304 bits (778), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 139/241 (57%), Positives = 178/241 (73%), Gaps = 2/241 (0%)
Query: 34 DACSKLNERLKPYKEKNPTGKWQDWVKAAFFDRTSLAATGYFKTPDIGYDMKKNEGAIFN 93
+AC + +RL+P+K+KNP G W+DWV AA+ DR SL+ TG+++TP++GY + N G F+
Sbjct: 523 EACQTILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFH 582
Query: 94 YFGYGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQVEGAFMQGYGLYVMEEL 153
YF YG + SEVEIDCLTGDH+ T+IVMDVG SLNPAID+GQVEGAF+QG GL+ +EEL
Sbjct: 583 YFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEEL 642
Query: 154 MFSPSGVLYTRGPGTYKIPGFADIPAEFNVSLLKGAPNPRAVYSSKAVGEPPLLLASSVY 213
+SP G L+TRGP TYKIP F IP EF VSLL+ PN +A+Y+SKAVGEPPL L +SV+
Sbjct: 643 HYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVF 702
Query: 214 FAIRDAIDAYRKQELGR--EDYYRLDSPATPAKIRLLCEDSITKEFPAPEPGSYKPWNIS 271
FAI+DAI A R Q ++ +RLDSPATP KIR C D T PG+ KPW++
Sbjct: 703 FAIKDAIRAARAQHTNNNTKELFRLDSPATPEKIRNACVDKFTTLCVTGAPGNCKPWSLR 762
Query: 272 I 272
+
Sbjct: 763 V 763
>pdb|3NRZ|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Hypoxanthine
pdb|3NRZ|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Hypoxanthine
pdb|3NVW|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Guanine
pdb|3NVW|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Guanine
pdb|3NVY|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Quercetin
pdb|3NVY|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Quercetin
Length = 756
Score = 295 bits (756), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 137/235 (58%), Positives = 173/235 (73%), Gaps = 2/235 (0%)
Query: 34 DACSKLNERLKPYKEKNPTGKWQDWVKAAFFDRTSLAATGYFKTPDIGYDMKKNEGAIFN 93
+AC + +RL+P+K+KNP G W+DWV AA+ DR SL+ TG+++TP++GY + N G F+
Sbjct: 522 EACQTILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFH 581
Query: 94 YFGYGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQVEGAFMQGYGLYVMEEL 153
YF YG + SEVEIDCLTGDH+ T+IVMDVG SLNPAID+GQVEGAF+QG GL+ +EEL
Sbjct: 582 YFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEEL 641
Query: 154 MFSPSGVLYTRGPGTYKIPGFADIPAEFNVSLLKGAPNPRAVYSSKAVGEPPLLLASSVY 213
+SP G L+TRGP TYKIP F IP EF VSLL+ PN +A+Y+SKAVGEPPL L +SV+
Sbjct: 642 HYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVF 701
Query: 214 FAIRDAIDAYRKQELGR--EDYYRLDSPATPAKIRLLCEDSITKEFPAPEPGSYK 266
FAI+DAI A R Q ++ +RLDSPATP KIR C D T PG+ K
Sbjct: 702 FAIKDAIRAARAQHTNNNTKELFRLDSPATPEKIRNACVDKFTTLCVTGAPGNCK 756
>pdb|3ETR|C Chain C, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3ETR|N Chain N, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3NS1|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With 6- Mercaptopurine
pdb|3NS1|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With 6- Mercaptopurine
pdb|3NVV|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Arsenite
pdb|3NVV|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Arsenite
pdb|3NVZ|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Indole-3- Aldehyde
pdb|3NVZ|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Indole-3- Aldehyde
Length = 755
Score = 294 bits (753), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 136/233 (58%), Positives = 172/233 (73%), Gaps = 2/233 (0%)
Query: 34 DACSKLNERLKPYKEKNPTGKWQDWVKAAFFDRTSLAATGYFKTPDIGYDMKKNEGAIFN 93
+AC + +RL+P+K+KNP G W+DWV AA+ DR SL+ TG+++TP++GY + N G F+
Sbjct: 522 EACQTILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFH 581
Query: 94 YFGYGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQVEGAFMQGYGLYVMEEL 153
YF YG + SEVEIDCLTGDH+ T+IVMDVG SLNPAID+GQVEGAF+QG GL+ +EEL
Sbjct: 582 YFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEEL 641
Query: 154 MFSPSGVLYTRGPGTYKIPGFADIPAEFNVSLLKGAPNPRAVYSSKAVGEPPLLLASSVY 213
+SP G L+TRGP TYKIP F IP EF VSLL+ PN +A+Y+SKAVGEPPL L +SV+
Sbjct: 642 HYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVF 701
Query: 214 FAIRDAIDAYRKQELGR--EDYYRLDSPATPAKIRLLCEDSITKEFPAPEPGS 264
FAI+DAI A R Q ++ +RLDSPATP KIR C D T PG+
Sbjct: 702 FAIKDAIRAARAQHTNNNTKELFRLDSPATPEKIRNACVDKFTTLCVTGAPGN 754
>pdb|3SR6|C Chain C, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
pdb|3SR6|L Chain L, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
Length = 745
Score = 293 bits (749), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 134/223 (60%), Positives = 169/223 (75%), Gaps = 2/223 (0%)
Query: 34 DACSKLNERLKPYKEKNPTGKWQDWVKAAFFDRTSLAATGYFKTPDIGYDMKKNEGAIFN 93
+AC + +RL+P+K+KNP G W+DWV AA+ DR SL+ TG+++TP++GY + N G F+
Sbjct: 522 EACQTILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFH 581
Query: 94 YFGYGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQVEGAFMQGYGLYVMEEL 153
YF YG + SEVEIDCLTGDH+ T+IVMDVG SLNPAID+GQVEGAF+QG GL+ +EEL
Sbjct: 582 YFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEEL 641
Query: 154 MFSPSGVLYTRGPGTYKIPGFADIPAEFNVSLLKGAPNPRAVYSSKAVGEPPLLLASSVY 213
+SP G L+TRGP TYKIP F IP EF VSLL+ PN +A+Y+SKAVGEPPL L +SV+
Sbjct: 642 HYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVF 701
Query: 214 FAIRDAIDAYRKQELGR--EDYYRLDSPATPAKIRLLCEDSIT 254
FAI+DAI A R Q ++ +RLDSPATP KIR C D T
Sbjct: 702 FAIKDAIRAARAQHTNNNTKELFRLDSPATPEKIRNACVDKFT 744
>pdb|2E3T|A Chain A, Crystal Structure Of Rat Xanthine Oxidoreductase Mutant
(W335a And F336l)
pdb|2E3T|B Chain B, Crystal Structure Of Rat Xanthine Oxidoreductase Mutant
(W335a And F336l)
Length = 1331
Score = 291 bits (744), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 138/240 (57%), Positives = 173/240 (72%), Gaps = 1/240 (0%)
Query: 34 DACSKLNERLKPYKEKNPTGKWQDWVKAAFFDRTSLAATGYFKTPDIGYDMKKNEGAIFN 93
+AC + +RL+P+K+K PTG W+ WV A+ SL+ATG++KTP++GY + N G F+
Sbjct: 1092 EACQTILKRLEPFKKKKPTGPWEAWVMDAYTSAVSLSATGFYKTPNLGYSFETNSGNPFH 1151
Query: 94 YFGYGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQVEGAFMQGYGLYVMEEL 153
YF YG + SEVEIDCLTGDH+ T+IVMDVG SLNPAID+GQVEGAF+QG GL+ MEEL
Sbjct: 1152 YFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTMEEL 1211
Query: 154 MFSPSGVLYTRGPGTYKIPGFADIPAEFNVSLLKGAPNPRAVYSSKAVGEPPLLLASSVY 213
+SP G L+TRGP TYKIP F IP EF VSLL+ PN RA+Y+SKAVGEPPL LASS++
Sbjct: 1212 HYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKRAIYASKAVGEPPLFLASSIF 1271
Query: 214 FAIRDAIDAYRKQELGR-EDYYRLDSPATPAKIRLLCEDSITKEFPAPEPGSYKPWNISI 272
FAI+DAI A R Q + ++LDSPATP KIR C D T P + K W++ I
Sbjct: 1272 FAIKDAIRAARAQHGDNAKQLFQLDSPATPEKIRNACVDQFTTLCVTGVPENCKSWSVRI 1331
>pdb|3AN1|A Chain A, Crystal Structure Of Rat D428a Mutant, Urate Bound Form
pdb|3AN1|B Chain B, Crystal Structure Of Rat D428a Mutant, Urate Bound Form
Length = 1331
Score = 291 bits (744), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 138/240 (57%), Positives = 173/240 (72%), Gaps = 1/240 (0%)
Query: 34 DACSKLNERLKPYKEKNPTGKWQDWVKAAFFDRTSLAATGYFKTPDIGYDMKKNEGAIFN 93
+AC + +RL+P+K+K PTG W+ WV A+ SL+ATG++KTP++GY + N G F+
Sbjct: 1092 EACQTILKRLEPFKKKKPTGPWEAWVMDAYTSAVSLSATGFYKTPNLGYSFETNSGNPFH 1151
Query: 94 YFGYGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQVEGAFMQGYGLYVMEEL 153
YF YG + SEVEIDCLTGDH+ T+IVMDVG SLNPAID+GQVEGAF+QG GL+ MEEL
Sbjct: 1152 YFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTMEEL 1211
Query: 154 MFSPSGVLYTRGPGTYKIPGFADIPAEFNVSLLKGAPNPRAVYSSKAVGEPPLLLASSVY 213
+SP G L+TRGP TYKIP F IP EF VSLL+ PN RA+Y+SKAVGEPPL LASS++
Sbjct: 1212 HYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKRAIYASKAVGEPPLFLASSIF 1271
Query: 214 FAIRDAIDAYRKQELGR-EDYYRLDSPATPAKIRLLCEDSITKEFPAPEPGSYKPWNISI 272
FAI+DAI A R Q + ++LDSPATP KIR C D T P + K W++ I
Sbjct: 1272 FAIKDAIRAARAQHGDNAKQLFQLDSPATPEKIRNACVDQFTTLCVTGVPENCKSWSVRI 1331
>pdb|1WYG|A Chain A, Crystal Structure Of A Rat Xanthine Dehydrogenase Triple
Mutant (C535a, C992r And C1324s)
Length = 1331
Score = 290 bits (743), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 138/240 (57%), Positives = 173/240 (72%), Gaps = 1/240 (0%)
Query: 34 DACSKLNERLKPYKEKNPTGKWQDWVKAAFFDRTSLAATGYFKTPDIGYDMKKNEGAIFN 93
+AC + +RL+P+K+K PTG W+ WV A+ SL+ATG++KTP++GY + N G F+
Sbjct: 1092 EACQTILKRLEPFKKKKPTGPWEAWVMDAYTSAVSLSATGFYKTPNLGYSFETNSGNPFH 1151
Query: 94 YFGYGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQVEGAFMQGYGLYVMEEL 153
YF YG + SEVEIDCLTGDH+ T+IVMDVG SLNPAID+GQVEGAF+QG GL+ MEEL
Sbjct: 1152 YFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTMEEL 1211
Query: 154 MFSPSGVLYTRGPGTYKIPGFADIPAEFNVSLLKGAPNPRAVYSSKAVGEPPLLLASSVY 213
+SP G L+TRGP TYKIP F IP EF VSLL+ PN RA+Y+SKAVGEPPL LASS++
Sbjct: 1212 HYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKRAIYASKAVGEPPLFLASSIF 1271
Query: 214 FAIRDAIDAYRKQELGR-EDYYRLDSPATPAKIRLLCEDSITKEFPAPEPGSYKPWNISI 272
FAI+DAI A R Q + ++LDSPATP KIR C D T P + K W++ I
Sbjct: 1272 FAIKDAIRAARAQHGDNAKQLFQLDSPATPEKIRNACVDQFTTLCVTGVPENSKSWSVRI 1331
>pdb|3ZYV|A Chain A, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
pdb|3ZYV|B Chain B, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
pdb|3ZYV|C Chain C, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
pdb|3ZYV|D Chain D, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
Length = 1335
Score = 241 bits (614), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 126/240 (52%), Positives = 162/240 (67%), Gaps = 1/240 (0%)
Query: 33 QDACSKLNERLKPYKEKNPTGKWQDWVKAAFFDRTSLAATGYFKTPDIGYDMKKNEGAIF 92
Q+AC L +RL+P ++NP+G W++WVK AF SL+ATGYF+ D +K EG IF
Sbjct: 1096 QNACQILMKRLEPIIKQNPSGTWEEWVKEAFVQSISLSATGYFRGYQADMDWEKGEGDIF 1155
Query: 93 NYFGYGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQVEGAFMQGYGLYVMEE 152
YF +GA+ SEVEIDCLTG H+ T+IVMD S+NPA+D+GQ+EGAF+QG GLY +EE
Sbjct: 1156 PYFVFGAACSEVEIDCLTGAHKNIRTDIVMDGSFSINPAVDIGQIEGAFVQGLGLYTLEE 1215
Query: 153 LMFSPSGVLYTRGPGTYKIPGFADIPAEFNVSLLKGAPNPRAVYSSKAVGEPPLLLASSV 212
L +SP GVLYTRGP YKI DIP EF+VSLL PNP+A+YSSK +GE L SV
Sbjct: 1216 LKYSPEGVLYTRGPHQYKIASVTDIPEEFHVSLLTPTPNPKAIYSSKGLGEAGTFLGCSV 1275
Query: 213 YFAIRDAIDAYRKQELGREDYYRLDSPATPAKIRLLCEDSITKEFPAPEPGSYKPWNISI 272
+FAI A+ A R +E G + ++SPAT IR+ CED T P + KPW+I +
Sbjct: 1276 FFAIAAAVAAAR-EERGLSPIWAINSPATAEVIRMACEDQFTNLVPQTDSKCCKPWSIPV 1334
>pdb|2W55|B Chain B, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
pdb|2W55|D Chain D, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
pdb|2W55|F Chain F, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
pdb|2W55|H Chain H, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
Length = 777
Score = 164 bits (414), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 134/241 (55%), Gaps = 25/241 (10%)
Query: 24 GNEYWSICSQDACSKLNERLKPY----------------KEKNPTGK-WQ--DWVKAAFF 64
G + + +DAC L RL + + +GK W+ + V AA+
Sbjct: 532 GADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYM 591
Query: 65 DRTSLAATGYFKTPDIGYDMKKNEGAIFNYFGYGASVSEVEIDCLTGDHQVRATEIVMDV 124
R SL+ATG++ TP + +D + +G F YF YGA+++EV ID LTG++++ T+I+ D
Sbjct: 592 ARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRILRTDILHDA 651
Query: 125 GESLNPAIDVGQVEGAFMQGYGLYVMEELMFSPSGVLYTRGPGTYKIPGFADIPAEFNVS 184
G SLNPA+D+GQ+EGA++QG G EEL++ G L T P TYKIP F+D P FNV+
Sbjct: 652 GASLNPALDIGQIEGAYVQGAGWLTTEELVWDHCGRLMTHAPSTYKIPAFSDRPRIFNVA 711
Query: 185 LLKGAPNPRAVYSSKAVGEPPLLLASSVYFAIRDAIDAYRKQELGREDYYRLDSPATPAK 244
L ++ SKAVGEPP LL S + A+ DA A + L +PATP
Sbjct: 712 LWDQPNREETIFRSKAVGEPPFLLGISAFLALHDACAACGPH------WPDLQAPATPEA 765
Query: 245 I 245
+
Sbjct: 766 V 766
>pdb|1JRO|B Chain B, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRO|D Chain D, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRO|F Chain F, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRO|H Chain H, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRP|B Chain B, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|D Chain D, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|F Chain F, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|H Chain H, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|2W3R|B Chain B, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|D Chain D, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|F Chain F, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|H Chain H, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3S|B Chain B, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|D Chain D, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|F Chain F, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|H Chain H, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W54|B Chain B, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|D Chain D, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|F Chain F, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|H Chain H, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
Length = 777
Score = 163 bits (413), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 134/241 (55%), Gaps = 25/241 (10%)
Query: 24 GNEYWSICSQDACSKLNERLKPY----------------KEKNPTGK-WQ--DWVKAAFF 64
G + + +DAC L RL + + +GK W+ + V AA+
Sbjct: 532 GADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYM 591
Query: 65 DRTSLAATGYFKTPDIGYDMKKNEGAIFNYFGYGASVSEVEIDCLTGDHQVRATEIVMDV 124
R SL+ATG++ TP + +D + +G F YF YGA+++EV ID LTG++++ T+I+ D
Sbjct: 592 ARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRILRTDILHDA 651
Query: 125 GESLNPAIDVGQVEGAFMQGYGLYVMEELMFSPSGVLYTRGPGTYKIPGFADIPAEFNVS 184
G SLNPA+D+GQ+EGA++QG G EEL++ G L T P TYKIP F+D P FNV+
Sbjct: 652 GASLNPALDIGQIEGAYVQGAGWLTTEELVWDHCGRLMTHAPSTYKIPAFSDRPRIFNVA 711
Query: 185 LLKGAPNPRAVYSSKAVGEPPLLLASSVYFAIRDAIDAYRKQELGREDYYRLDSPATPAK 244
L ++ SKAVGEPP LL S + A+ DA A + L +PATP
Sbjct: 712 LWDQPNREETIFRSKAVGEPPFLLGISAFLALHDACAACGPH------WPDLQAPATPEA 765
Query: 245 I 245
+
Sbjct: 766 V 766
>pdb|3HRD|B Chain B, Crystal Structure Of Nicotinate Dehydrogenase
pdb|3HRD|F Chain F, Crystal Structure Of Nicotinate Dehydrogenase
Length = 330
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 53 GKWQDWVKAAFFDRTSLAATGYFKTPDIGYDMKKNEGAIFNYFGYGASVSEVEIDCLTGD 112
G+ +KAA R ++ A G + G + G F + Y +++EVE+D TG+
Sbjct: 143 GELMAAMKAA--GRMAVGA-GSYNPNTTGLAPENMSGIPFEVYSYATTIAEVEVDTETGE 199
Query: 113 HQVRATEIVMDVGESLNPAIDVGQVEGAFMQGYGLYVMEEL-MFSPSGVLYTRGPGTYKI 171
V DVG +N ++ GQ+EG G G +MEE+ + + +G + Y I
Sbjct: 200 VDVLKVVSAHDVGTPINRSMVEGQIEGGVTMGQGFVLMEEIEVNTKNGAIKNPSMSKYII 259
Query: 172 PGFADIPAEFNVSLL--KGAPNPRAVYSSKAVGEPPLL-LASSVYFAIRDAI 220
P D+P E + L+ +G P P + +K VGEP L+ + +V AI DA+
Sbjct: 260 PSNRDVP-EIHSILVESEGGPGP---FGAKGVGEPALIPMIPAVVAAIEDAL 307
>pdb|1RM6|A Chain A, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1RM6|D Chain D, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|A Chain A, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|D Chain D, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
Length = 769
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 39 LNERLKPYKEKNPTGKWQDWVKAAFFDRTSLAATGYFKTPDIGYDMKKNEGAIFNY---F 95
++E ++P +Q+ VKAA D ++ G + P KK G+ F
Sbjct: 562 IDEMFMVSGSQDPGLSFQEVVKAAMVDSGTITVKGTYTCPTEFQGDKKIRGSAIGATMGF 621
Query: 96 GYGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQVEGAFMQGYGLYVMEELMF 155
Y A V E +D +TG + +DVG++LNP GQ +G G G + EE ++
Sbjct: 622 CYAAQVVEASVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEETVY 681
Query: 156 SPSGVLYTRGPGTYKIPGFADIP 178
+G + Y++P + P
Sbjct: 682 D-NGRMVHGNILDYRVPTIVESP 703
>pdb|1SIJ|A Chain A, Crystal Structure Of The Aldehyde Dehydrogenase (A.K.A.
Aor Or Mop) Of Desulfovibrio Gigas Covalently Bound To
[aso3]-
pdb|1VLB|A Chain A, Structure Refinement Of The Aldehyde Oxidoreductase From
Desulfovibrio Gigas At 1.28 A
pdb|3FAH|A Chain A, Glycerol Inhibited Form Of Aldehyde Oxidoreductase From
Desulfovibrio Gigas
pdb|3FC4|A Chain A, Ethylene Glycol Inhibited Form Of Aldehyde Oxidoreductase
From Desulfovibrio Gigas
pdb|3L4P|A Chain A, Crystal Structure Of The Aldehyde Dehydrogenase (A.K.A.
Aor Or Mop) Of Desulfovibrio Gigas Covalently Bound To
[aso3]-
Length = 907
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 91/229 (39%), Gaps = 20/229 (8%)
Query: 19 NSERVGNEYWSICSQDACSKLNERLKPYKEKNPTGKWQ-DWVKAAFFDRTSLAATGYFKT 77
NS G + + +A E L EK G + D +KAA D+ + + +
Sbjct: 691 NSGPSGGSRQQVMTGNAIRVACENLLKACEKPGGGYYTYDELKAA--DKPTKITGNWTAS 748
Query: 78 PDIGYDMKKNEGAIFNYFGYGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQV 137
D G F + YG ++EV +D TG V ++ D+G N GQ+
Sbjct: 749 GATHCDAVTGLGKPFVVYMYGVFMAEVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQI 808
Query: 138 EGAFMQGYGLYVMEELM-FSPSGVLYTRGPGTYKIPGFADIPAEFNVSLLKGAPNPRAVY 196
G QG GL + E+ L G P IP + ++ + P P +
Sbjct: 809 YGGLAQGIGLALSEDFEDIKKHATLVGAG-----FPFIKQIPDKLDIVYVN-HPRPDGPF 862
Query: 197 SSKAVGEPPLLLASSVYFAIRDAIDAYRKQELGREDYYRLDSPATPAKI 245
+ VGE PL +S + AI +AI + + YRL PA P K+
Sbjct: 863 GASGVGELPL---TSPHAAIINAIKSATGVRI-----YRL--PAYPEKV 901
>pdb|1T3Q|B Chain B, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
pdb|1T3Q|E Chain E, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
Length = 788
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Query: 81 GYDMKKNEGAIFN----YFGYGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQ 136
G+D A ++ G + VEID T +V V D G +NP I GQ
Sbjct: 619 GFDATLEATATYDPSDLVLANGGHAAIVEIDASTYATRVTDFFAVEDCGTMINPMIVEGQ 678
Query: 137 VEGAFMQGYGLYVMEELMFSPSGVLYTRGPGTYKIPGFADIPAEFNVSLLKGAPNPRAVY 196
+ G Q G ++EE+++ G L T Y IP D+P + + L+ P+P
Sbjct: 679 IRGGIAQAIGQTLLEEVIYDDFGQLVTTTLMDYLIPTTLDVP-DIRIRHLE-TPSPLVPG 736
Query: 197 SSKAVGEPPLL 207
K +GE ++
Sbjct: 737 GIKGMGESAMI 747
>pdb|1DGJ|A Chain A, Crystal Structure Of The Aldehyde Oxidoreductase From
Desulfovibrio Desulfuricans Atcc 27774
Length = 907
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Query: 86 KNEGAIFNYFGYGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQVEGAFMQGY 145
K +G+ F + YG ++EV ++ TG V V D+G+ N + GQ+ G QG
Sbjct: 757 KGQGSPFACYMYGLFLTEVAVEVATGKATVEKMVCVADIGKICNKLVVDGQIYGGLAQGV 816
Query: 146 GLYVMEELMFSPSGVLYTRGPGTYKIPGFADIPAEFNVSLLKGAPNPRAVYSSKAVGEPP 205
GL + E+ + G IP IP + + ++ P + + VGE P
Sbjct: 817 GLALSEDY----EDLKKHSTMGGAGIPSIKMIPDDIEIVYVE-TPRKDGPFGASGVGEMP 871
Query: 206 L 206
L
Sbjct: 872 L 872
>pdb|1FFU|B Chain B, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of
The Molybdenum Cofactor
pdb|1FFU|E Chain E, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of
The Molybdenum Cofactor
pdb|1FFV|B Chain B, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
pdb|1FFV|E Chain E, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
Length = 803
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 97 YGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQVEGAFMQGYGLYVMEELMFS 156
+G + V+ID TG+ +VR + D G +NP I GQ+ G +GY + + +++ F
Sbjct: 653 FGIYLCVVDIDRATGETKVRRFYALDDCGTRINPMIIEGQIHGGLTEGYAVAMGQQMPFD 712
Query: 157 PSGVLYTRGPGTYKIPGFADIPA-EFNVSLLKGAPNPRAVYSSKAVGEPP 205
G L Y +P + P E + ++ P+P +K V E P
Sbjct: 713 AQGNLLGNTLMDYFLPTAVETPHWETDHTV---TPSPHHPIGAKGVAESP 759
>pdb|1N5W|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N5W|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N60|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N60|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N61|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N61|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N62|B Chain B, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N62|E Chain E, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N63|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
pdb|1N63|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
Length = 809
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 69 LAATGYFKTPDIGYDMKKNEGAIFNYFGYGASVSEVEIDCLTGDHQVRATEIVMDVGESL 128
L A Y+ P++ Y +GA ++ID TG + R + D G +
Sbjct: 644 LEAVNYYDPPNMTYP-------------FGAYFCIMDIDVDTGVAKTRRFYALDDCGTRI 690
Query: 129 NPAIDVGQVEGAFMQGYGLYVMEELMFSPSGVLYTRGPGTYKIPGFADIP---AEFNVSL 185
NP I GQV G + + + + +E+ + G + + +P + P ++ V+
Sbjct: 691 NPMIIEGQVHGGLTEAFAVAMGQEIRYDEQGNVLGASFMDFFLPTAVETPKWETDYTVT- 749
Query: 186 LKGAPNPRAVYSSKAVGEPP 205
P+P +K VGE P
Sbjct: 750 ----PSPHHPIGAKGVGESP 765
>pdb|1ZXI|B Chain B, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
pdb|1ZXI|E Chain E, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
Length = 809
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 69 LAATGYFKTPDIGYDMKKNEGAIFNYFGYGASVSEVEIDCLTGDHQVRATEIVMDVGESL 128
L A Y+ P++ Y +GA ++ID TG + R + D G +
Sbjct: 644 LEAVNYYDPPNMTYP-------------FGAYFCIMDIDIDTGVAKTRRFYALDDCGTRI 690
Query: 129 NPAIDVGQVEGAFMQGYGLYVMEELMFSPSGVLYTRGPGTYKIPGFADIP---AEFNVSL 185
NP I GQV G + + + + +E+ + G + + +P + P ++ V+
Sbjct: 691 NPMIIEGQVHGGLTEAFAVAMGQEIRYDEQGNVLGASFMDFFLPTAVETPKWETDYTVT- 749
Query: 186 LKGAPNPRAVYSSKAVGEPP 205
P+P +K VGE P
Sbjct: 750 ----PSPHHPIGAKGVGESP 765
>pdb|2O6D|A Chain A, Structure Of Native Rtp34 From Treponema Pallidum
pdb|2O6D|B Chain B, Structure Of Native Rtp34 From Treponema Pallidum
pdb|2O6E|A Chain A, Structure Of Native Rtp34 From Treponema Pallidum From
Zinc-Soaked Crystals
pdb|2O6E|B Chain B, Structure Of Native Rtp34 From Treponema Pallidum From
Zinc-Soaked Crystals
pdb|2O6F|A Chain A, Structure Of Metal- Free Rtp34 From Treponema Pallidum
pdb|2O6F|B Chain B, Structure Of Metal- Free Rtp34 From Treponema Pallidum
Length = 189
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 12/84 (14%)
Query: 98 GASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQVEGAFMQGYGLYVMEELMFSP 157
GA S+ E DC + + A E D+G + + +V AF+Q +G ++++MF+P
Sbjct: 63 GAQPSKEEADCHI-EADIHANEAGKDLGYGVGDFVPYLRVV-AFLQKHGSEKVQKVMFAP 120
Query: 158 ----------SGVLYTRGPGTYKI 171
+ V + G GTYK+
Sbjct: 121 MNAGDGPHYGANVKFEEGLGTYKV 144
>pdb|3PJL|A Chain A, The Crystal Structure Of Tp34 Bound To Co (Ii) Ion At Ph
7.5
pdb|3PJL|B Chain B, The Crystal Structure Of Tp34 Bound To Co (Ii) Ion At Ph
7.5
pdb|3PJN|A Chain A, The Crystal Structure Of Tp34 Bound To Zn(Ii) Ion At Ph
7.5
pdb|3PJN|B Chain B, The Crystal Structure Of Tp34 Bound To Zn(Ii) Ion At Ph
7.5
Length = 212
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 12/84 (14%)
Query: 98 GASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAIDVGQVEGAFMQGYGLYVMEELMFSP 157
GA S+ E DC + + A E D+G + + +V AF+Q +G ++++MF+P
Sbjct: 86 GAQPSKEEADCHI-EADIHANEAGKDLGYGVGDFVPYLRVV-AFLQKHGSEKVQKVMFAP 143
Query: 158 ----------SGVLYTRGPGTYKI 171
+ V + G GTYK+
Sbjct: 144 MNAGDGPHYGANVKFEEGLGTYKV 167
>pdb|3IZY|P Chain P, Mammalian Mitochondrial Translation Initiation Factor 2
Length = 537
Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 97 YGASVSEVEIDCLTGDHQVRATEIVMDVGESLNPAID-VGQVEGAFMQGY 145
YG V V + LTG++ + E + + E L D G VEG ++ +
Sbjct: 138 YGGDVQAVHVSALTGENMMALAEATIALAEMLELKADPTGAVEGTVIESF 187
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,681,192
Number of Sequences: 62578
Number of extensions: 434180
Number of successful extensions: 1195
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1157
Number of HSP's gapped (non-prelim): 31
length of query: 287
length of database: 14,973,337
effective HSP length: 98
effective length of query: 189
effective length of database: 8,840,693
effective search space: 1670890977
effective search space used: 1670890977
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)