Query psy14046
Match_columns 857
No_of_seqs 508 out of 3502
Neff 7.0
Searched_HMMs 46136
Date Fri Aug 16 18:12:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14046.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14046hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02906 xanthine dehydrogenas 100.0 5E-167 1E-171 1567.0 81.9 799 1-857 57-985 (1319)
2 TIGR02969 mam_aldehyde_ox alde 100.0 6E-167 1E-171 1564.8 79.7 795 1-857 77-990 (1330)
3 KOG0430|consensus 100.0 1E-158 2E-163 1382.6 62.1 763 1-857 76-949 (1257)
4 PLN00192 aldehyde oxidase 100.0 3E-157 6E-162 1478.7 76.7 774 1-857 80-1008(1344)
5 COG4630 XdhA Xanthine dehydrog 100.0 1.6E-95 4E-100 765.3 27.0 400 1-467 82-481 (493)
6 TIGR02963 xanthine_xdhA xanthi 100.0 1.5E-93 3.3E-98 817.5 42.9 393 1-463 74-466 (467)
7 PRK09800 putative hypoxanthine 100.0 4.4E-81 9.6E-86 763.6 42.9 309 537-849 170-638 (956)
8 TIGR03311 Se_dep_Molyb_1 selen 100.0 6.8E-81 1.5E-85 758.6 43.0 303 539-847 162-572 (848)
9 TIGR03313 Se_sel_red_Mo probab 100.0 2.5E-80 5.3E-85 757.9 42.9 310 537-849 166-634 (951)
10 TIGR02965 xanthine_xdhB xanthi 100.0 2.9E-66 6.3E-71 627.0 33.0 315 539-857 1-420 (758)
11 COG4631 XdhB Xanthine dehydrog 100.0 1.2E-66 2.7E-71 565.5 25.0 319 536-857 16-437 (781)
12 TIGR03196 pucD xanthine dehydr 100.0 4.9E-65 1.1E-69 615.7 32.5 306 538-846 2-414 (768)
13 PRK09970 xanthine dehydrogenas 100.0 6.7E-65 1.4E-69 615.9 32.4 313 538-853 2-432 (759)
14 TIGR03194 4hydrxCoA_A 4-hydrox 100.0 3.5E-64 7.6E-69 607.3 32.5 304 543-850 1-414 (746)
15 TIGR02416 CO_dehy_Mo_lg carbon 100.0 3.1E-62 6.7E-67 592.8 32.6 308 547-855 1-438 (770)
16 PRK09971 xanthine dehydrogenas 100.0 4.7E-60 1E-64 513.9 28.4 279 173-467 6-286 (291)
17 TIGR03195 4hydrxCoA_B 4-hydrox 100.0 3.1E-56 6.7E-61 484.8 29.1 277 171-465 4-320 (321)
18 TIGR03199 pucC xanthine dehydr 100.0 3.3E-54 7.1E-59 462.4 26.5 261 177-458 1-263 (264)
19 COG1319 CoxM Aerobic-type carb 100.0 1.2E-53 2.6E-58 453.5 23.5 278 171-467 3-282 (284)
20 PRK09799 putative oxidoreducta 100.0 1.8E-50 4E-55 430.7 25.2 250 173-467 4-254 (258)
21 TIGR03312 Se_sel_red_FAD proba 100.0 7.7E-50 1.7E-54 425.3 24.7 249 173-466 3-252 (257)
22 COG1529 CoxL Aerobic-type carb 100.0 1.5E-45 3.2E-50 444.1 28.0 309 537-850 4-415 (731)
23 PF00941 FAD_binding_5: FAD bi 100.0 3.1E-42 6.7E-47 346.3 13.8 170 171-351 2-171 (171)
24 PF02738 Ald_Xan_dh_C2: Molybd 100.0 1E-32 2.2E-37 325.7 16.9 176 680-856 15-291 (547)
25 PF01799 Fer2_2: [2Fe-2S] bind 100.0 1.4E-32 3.1E-37 235.4 7.6 75 8-84 1-75 (75)
26 TIGR03193 4hydroxCoAred 4-hydr 100.0 2.9E-32 6.2E-37 261.9 10.0 84 1-86 65-148 (148)
27 TIGR03198 pucE xanthine dehydr 100.0 8.7E-32 1.9E-36 260.8 10.1 84 1-87 67-150 (151)
28 PRK09908 xanthine dehydrogenas 100.0 2.7E-31 5.8E-36 257.8 10.3 86 1-87 71-157 (159)
29 COG2080 CoxS Aerobic-type carb 100.0 1.9E-30 4.1E-35 248.7 10.3 87 1-88 67-153 (156)
30 PRK11433 aldehyde oxidoreducta 100.0 3.5E-30 7.7E-35 261.5 10.5 86 1-88 115-215 (217)
31 PF01315 Ald_Xan_dh_C: Aldehyd 100.0 1.6E-29 3.5E-34 235.8 10.0 107 553-661 1-111 (111)
32 PF03450 CO_deh_flav_C: CO deh 99.8 1.7E-18 3.6E-23 159.9 11.7 102 359-464 2-103 (103)
33 COG1529 CoxL Aerobic-type carb 98.1 1.3E-07 2.8E-12 115.5 -6.6 199 531-768 177-387 (731)
34 PRK14652 UDP-N-acetylenolpyruv 97.5 0.00032 6.9E-09 77.2 9.4 160 163-351 28-193 (302)
35 PRK13905 murB UDP-N-acetylenol 96.9 0.0044 9.6E-08 68.3 10.2 161 163-352 23-191 (298)
36 TIGR00179 murB UDP-N-acetyleno 96.6 0.0069 1.5E-07 66.3 8.6 160 163-349 5-171 (284)
37 PRK14650 UDP-N-acetylenolpyruv 96.4 0.028 6E-07 61.8 12.1 164 163-352 25-193 (302)
38 PRK13906 murB UDP-N-acetylenol 96.4 0.021 4.6E-07 63.1 11.3 158 165-351 31-195 (307)
39 PF01565 FAD_binding_4: FAD bi 96.3 0.0044 9.5E-08 60.0 4.3 101 173-294 3-108 (139)
40 PRK14653 UDP-N-acetylenolpyruv 96.2 0.022 4.8E-07 62.6 9.8 159 163-351 26-191 (297)
41 TIGR01676 GLDHase galactonolac 96.0 0.0084 1.8E-07 70.6 5.9 102 171-294 62-167 (541)
42 COG0277 GlcD FAD/FMN-containin 96.0 0.0079 1.7E-07 70.0 5.5 102 172-294 33-139 (459)
43 PRK12436 UDP-N-acetylenolpyruv 95.8 0.038 8.3E-07 61.1 9.3 157 166-352 32-196 (305)
44 PRK00046 murB UDP-N-acetylenol 95.5 0.087 1.9E-06 58.8 11.0 159 163-350 13-185 (334)
45 PLN02465 L-galactono-1,4-lacto 95.2 0.11 2.4E-06 62.0 11.0 102 171-294 97-202 (573)
46 TIGR00387 glcD glycolate oxida 95.1 0.023 5.1E-07 65.5 5.1 99 175-293 2-105 (413)
47 PRK13903 murB UDP-N-acetylenol 95.1 0.095 2.1E-06 59.2 9.7 82 163-251 25-112 (363)
48 PRK14649 UDP-N-acetylenolpyruv 95.1 0.12 2.7E-06 56.9 10.3 160 163-350 13-189 (295)
49 TIGR01679 bact_FAD_ox FAD-link 95.0 0.051 1.1E-06 62.8 7.2 76 172-251 13-89 (419)
50 PRK11183 D-lactate dehydrogena 94.9 0.065 1.4E-06 62.8 7.8 102 171-294 39-152 (564)
51 PRK14648 UDP-N-acetylenolpyruv 94.8 0.16 3.5E-06 56.8 10.3 83 163-251 22-113 (354)
52 TIGR01678 FAD_lactone_ox sugar 94.7 0.041 8.8E-07 64.0 5.6 101 172-294 16-120 (438)
53 PRK11230 glycolate oxidase sub 94.3 0.086 1.9E-06 62.3 7.1 102 173-293 58-163 (499)
54 PRK14651 UDP-N-acetylenolpyruv 94.2 0.35 7.7E-06 52.5 11.0 155 163-352 13-169 (273)
55 TIGR01677 pln_FAD_oxido plant- 94.1 0.077 1.7E-06 63.3 6.2 81 172-252 33-118 (557)
56 PLN02805 D-lactate dehydrogena 94.1 0.088 1.9E-06 62.9 6.6 101 172-293 135-239 (555)
57 COG0812 MurB UDP-N-acetylmuram 93.0 0.27 5.9E-06 53.5 7.6 161 163-353 13-183 (291)
58 PRK11282 glcE glycolate oxidas 91.4 0.38 8.2E-06 54.3 6.6 92 181-294 8-102 (352)
59 PLN02441 cytokinin dehydrogena 88.6 0.73 1.6E-05 54.6 6.1 78 171-251 65-154 (525)
60 TIGR02965 xanthine_xdhB xanthi 82.8 1.9 4.1E-05 53.8 6.0 94 714-813 446-551 (758)
61 PRK09970 xanthine dehydrogenas 82.5 2.5 5.4E-05 52.8 6.9 96 712-813 457-565 (759)
62 TIGR02416 CO_dehy_Mo_lg carbon 79.9 2.4 5.3E-05 52.9 5.6 92 716-813 476-579 (770)
63 PRK13904 murB UDP-N-acetylenol 79.8 11 0.00024 40.7 9.7 146 163-352 11-158 (257)
64 TIGR03194 4hydrxCoA_A 4-hydrox 78.1 3.6 7.9E-05 51.2 6.3 94 714-813 443-548 (746)
65 PRK09800 putative hypoxanthine 75.1 7.1 0.00015 50.0 7.7 86 1-88 66-151 (956)
66 TIGR03313 Se_sel_red_Mo probab 72.8 8.5 0.00018 49.3 7.6 86 1-88 62-147 (951)
67 TIGR03196 pucD xanthine dehydr 67.1 12 0.00026 46.8 7.2 88 717-813 467-571 (768)
68 PF02738 Ald_Xan_dh_C2: Molybd 63.2 8.8 0.00019 46.1 4.8 93 716-814 320-424 (547)
69 PF10437 Lip_prot_lig_C: Bacte 62.1 39 0.00084 29.8 7.6 50 376-431 19-68 (86)
70 KOG1759|consensus 54.1 39 0.00083 31.8 6.2 69 739-809 21-95 (115)
71 TIGR03311 Se_dep_Molyb_1 selen 43.7 64 0.0014 41.0 8.0 85 1-88 62-146 (848)
72 TIGR02969 mam_aldehyde_ox alde 38.4 75 0.0016 42.5 7.8 59 713-772 1015-1084(1330)
73 PLN02906 xanthine dehydrogenas 37.0 75 0.0016 42.5 7.4 60 713-773 1010-1080(1319)
74 PRK01964 4-oxalocrotonate taut 32.7 37 0.00081 28.1 2.5 31 740-770 23-56 (64)
75 COG0245 IspF 2C-methyl-D-eryth 26.4 83 0.0018 31.4 4.0 34 739-772 110-144 (159)
76 PF03851 UvdE: UV-endonuclease 25.6 1.1E+02 0.0024 33.4 5.2 62 735-820 115-188 (275)
77 cd00491 4Oxalocrotonate_Tautom 25.1 72 0.0016 25.5 2.9 31 740-770 22-55 (58)
78 PF13046 DUF3906: Protein of u 23.9 1.1E+02 0.0023 25.9 3.5 18 635-652 16-33 (64)
79 PTZ00397 macrophage migration 23.8 72 0.0016 29.8 3.0 31 741-771 81-114 (116)
80 TIGR00013 taut 4-oxalocrotonat 23.2 80 0.0017 25.7 2.8 32 740-771 23-57 (63)
81 PLN00192 aldehyde oxidase 22.8 2.7E+02 0.0059 37.5 8.9 59 713-772 1028-1105(1344)
82 PRK02220 4-oxalocrotonate taut 21.9 70 0.0015 26.0 2.2 32 740-771 23-57 (61)
83 PF06971 Put_DNA-bind_N: Putat 20.1 84 0.0018 25.2 2.2 16 796-811 32-47 (50)
No 1
>PLN02906 xanthine dehydrogenase
Probab=100.00 E-value=5.3e-167 Score=1566.98 Aligned_cols=799 Identities=45% Similarity=0.755 Sum_probs=711.9
Q ss_pred CCCceEEEcCcCCCCCCCCcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHhCC-CCCCHHHHHHHHhCCcccCCCChhHH
Q psy14046 1 MHGLAVTTVEGIGSTKTKLHPVQERLAKAHGSQCGFCTPGIVMSMYALLRSLP-GKPTMKDMEVALQGNLCRCTGYRPIL 79 (857)
Q Consensus 1 ~~g~~i~Tveg~~~~~~~~~~iq~~~~~~~~~qCGfCtpg~v~~~~~ll~~~~-~~~~~~~i~~~l~gnlCrCtgy~~i~ 79 (857)
+||++|+|||||++.++.|||||++|+++||+|||||||||||++++||++++ . |++++|+++|+|||||||||+||+
T Consensus 57 ~~g~~i~Tvegl~~~~~~~~~vq~a~~~~~~~QCG~CtpG~vm~~~~ll~~~~~~-~~~~~i~~~l~gnlCRCtgy~~i~ 135 (1319)
T PLN02906 57 VEGMHVITVEGIGNRRDGLHPVQEALASMHGSQCGFCTPGFIMSMYALLRSSKTP-PTEEQIEECLAGNLCRCTGYRPIL 135 (1319)
T ss_pred hCCCEEEecCCCCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHHhCCCC-CCHHHHHHHhcCCcccCCCCHHHH
Confidence 58999999999986456899999999999999999999999999999999984 6 999999999999999999999999
Q ss_pred HHHHHHHHhhhhcccccCCCCCcCCCCCCCcccC----CCCCccCCCCCCCc---------hhh-hccCCC----CCCCC
Q psy14046 80 EGFKTFTEEWERDRLTNGTNGINGSVQNGNGVCA----MGENCCKNKKPGDE---------EEK-EELFSP----SEFTP 141 (857)
Q Consensus 80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~----~~~~c~~~~~~~~~---------~~~-~~~~~~----~~~~~ 141 (857)
+|+++++.+.+. .. .+.|. +++.||++....|. ..+ .++|++ ++|.+
T Consensus 136 ~a~~~~~~~~~~--~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (1319)
T PLN02906 136 DAFRVFAKTDDA--LY-------------TGVSSLSLQDGEPICPSTGKPCSCGSKTTSAAGTCKSDRFQPISYSEIDGS 200 (1319)
T ss_pred HHHHHHHhcccc--cC-------------CcccchhhhhccccccccCcccccccccccccccccccccccccccccccc
Confidence 999999876320 00 01121 11245532211110 001 134443 57889
Q ss_pred CCCCCCCCCCccccccccCCccceeeec-CCcEEEccCCHHHHHHHHHhCCCCEEEecCcchhhhhhcCCCCCCeeecCC
Q psy14046 142 YDKSQEPTFPPELQLNDTYDKEYLQIRG-PRATWYRPQTLTQLLELKAKFPEAKLVVGNSEIGVEVKFKKFFYPVLIQPS 220 (857)
Q Consensus 142 ~~~~~~~~fp~~l~~~~~~~~~~~~~~~-~~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~ 220 (857)
|++.||++|||+|+.. ...++.+.+ ..++|++|+||+||+++|+++|++++|||||||+++++++...++++|||+
T Consensus 201 ~~~~~~~~f~~~l~~~---~~~~~~~~~~~~~~~~~P~tl~ea~~ll~~~~~a~ivAGGTdl~~~~~~~~~~~~~lIdi~ 277 (1319)
T PLN02906 201 WYTEKELIFPPELLLR---KLTPLKLLGNGGLTWYRPTSLQHLLELKAEYPDAKLVVGNTEVGIEMRFKNAQYPVLISPT 277 (1319)
T ss_pred cCccccccCCHHHhhC---CCcceeecCCCCceEECcCCHHHHHHHHHhCCCCEEEEcCchhHHHhhhccCCCCeEEECC
Confidence 9999999999999632 234566754 689999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceecCCeEEEcccccHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccCCCCCHH
Q psy14046 221 LIPELTQPRVEENGVWIGGATSLNDMRAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGSPISDMN 300 (857)
Q Consensus 221 ~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~asp~sDl~ 300 (857)
+|+||++|+.++++|+|||+|||++|++++...+.+.|+...+.+|.|++++++|||+||||+||||||||+++|+||++
T Consensus 278 ~I~eL~~I~~~~~~l~IGA~vT~~el~~~l~~~i~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asP~sD~~ 357 (1319)
T PLN02906 278 HVPELNAIKVKDDGLEIGAAVRLSELQNLFRKVVKERPAHETSACKAFIEQLKWFAGTQIRNVASIGGNICTASPISDLN 357 (1319)
T ss_pred CChhhhcEEecCCEEEEecCCcHHHHHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCHhhcCceechhhhccCCCchhHH
Confidence 99999999999999999999999999999888777777777788999999999999999999999999999999999999
Q ss_pred HHHhhcCcEEEEEEcCCC-eEEEEcccccccccccccCCCCcEEEEEEecCCCccchhhheeeeccCCCchhheeeeEEE
Q psy14046 301 PILMAARCRLLLESKAEG-TREVTMDGSFYTSYRKNIVRPDEVLRAIYIPHTAETQYFKAYKQARRRDDDIAIVNAAFNV 379 (857)
Q Consensus 301 p~LlAldA~v~l~s~~~G-~R~vpl~e~F~~g~~~t~L~~~EiI~~I~iP~~~~~~~~~~~K~~~R~~~d~a~v~~A~~~ 379 (857)
|+|+||||+|+|.+. +| +|+||++| ||.||++|.|+++|||++|+||.+..+.++.+||+++|+++|||+||+|+.+
T Consensus 358 p~LlAl~A~v~l~s~-~g~~R~vpl~d-Ff~g~~kt~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~V~~A~~v 435 (1319)
T PLN02906 358 PLWMAAGATFVIISC-DGDIRSVPASD-FFLGYRKVDLKPDEILLSVFLPWTRPFEYVKEFKQAHRRDDDIAIVNAGMRV 435 (1319)
T ss_pred HHHHHcCcEEEEEcC-CCCeEEEEHHH-hcCccccccCCCCceEEEEEccCCCCCccEEEEEEcCccccchhheeeEEEE
Confidence 999999999999998 65 89999999 9999999999999999999999876667788999999999999999999999
Q ss_pred EEeecCCceEEeEeEEEEecCCCcceeHHHHHHHHhCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy14046 380 TLDIQSDGAVVKDCEFAFGGMAPTTVLAKKTTEQMINKPWNQSLLEDTWRNLMADLPLDHSAPGGMIQYRRSLTLSLFYK 459 (857)
Q Consensus 380 ~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~~i~~p~~d~~gs~~YRr~la~~ll~r 459 (857)
+++.++++++|+++||+||||+++|+|+.++|++|.|++|+++++++|++.+.+++.++.+.+++|++||++|+.+||+|
T Consensus 436 ~l~~~~~~~~i~~aria~Ggva~~p~ra~~~E~~L~G~~~~~~~i~~A~~~l~~~~~p~~d~~~~sa~YR~~la~~ll~r 515 (1319)
T PLN02906 436 KLEEKDGEWIVSDASIAYGGVAPLSVSARKTEEFLIGKPWNKETLQDALKVLQKDILIKEDAPGGMVEFRKSLALSFFFK 515 (1319)
T ss_pred EEecCCCCceEeEEEEEEeccCCceecHHHHHHHhcCCCCCHHHHHHHHHHHHhccCCCcCCCCCCHHHHHHHHHHHHHH
Confidence 99731121279999999999999999999999999999999999999999999999944444479999999999999999
Q ss_pred HHHHHhcccc-----CCCCCCCCCCCcccccCCCCCCcceeeeecccCCCCCchhHhhhhcCCCcccccCCcccCCCCcc
Q psy14046 460 FYIAVSVDTQ-----VTPISSRDKSGAQTFHTLPTKSSQYFQVFRVKSGPGGSLIRDLADALPPSLTRLAPYFQVPSTQA 534 (857)
Q Consensus 460 ~l~~~~~~~~-----~~~~~~~~~s~~~~~~~~~~~~~q~~~~~~~~~~~~g~~~~~aa~~~p~~~~~~~~~~~~~~~~~ 534 (857)
||++++++++ ...+++.+.|+.+.++||+++|.|.|+. .+
T Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~-----------------------------------~~ 560 (1319)
T PLN02906 516 FFLWVSHQLEADGSTIETFPESHLSAAQPFPRPSSVGMQDYET-----------------------------------VK 560 (1319)
T ss_pred HHHHHhhhccccccccccCChhhccccccccCCCCccceeccc-----------------------------------cc
Confidence 9999998763 1257788999999999999999999975 35
Q ss_pred ccCCCCCccccccccccCccceecccCcCCCCCcEEEEEEeCCCCCeEEecCCchhhhhCCCeEEEEecCCCCCCCCCCC
Q psy14046 535 KSDLVGRPIVHASAFKQATGEAIYCDDIPKYQTELYLAFVVSSKPHAKILSVDPSAALAMEGVRGWVDERDVPGQKNYVG 614 (857)
Q Consensus 535 ~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~vvt~~Dip~~~~~~g 614 (857)
++++||++++|+|+..||||+++|++|++.+|||||+++||||++||+|++||+++|++||||++|+|++|+|+.| .+|
T Consensus 561 ~~~~vGk~~~r~d~~~kvtG~a~Y~~Di~~~~g~L~a~~vrSp~aharI~sID~s~A~~~pGV~~v~t~~Dip~~~-~~g 639 (1319)
T PLN02906 561 QGTAVGQPEVHLSAELQVTGEAEYADDIPMPPNTLHAALVLSTKPHARILSIDDSEAKSSPGFAGIFLAKDVPGDN-MIG 639 (1319)
T ss_pred ccccCCCCccCcchhhhcceeEEeccCCcCCCCCEEEEEEecCcCceEEeecchHHHhCCCCeEEEEchhhCCCCC-CCC
Confidence 6788999999999999999999999999435899999999999999999999999999999999999999999766 567
Q ss_pred ccccccccccCCeEeecCCeEEEEEECCHHHHHHHhccceeEEeeCCCCCCHHHHHhcCCCCCCCCccccCCChhhhhhc
Q psy14046 615 GIIHDDVIFARDVVTCVGQPIGGVIAEDQLIAQRAAALVKVTYEELPAIFSIQEAIEHKSFFNLEPSVYGRGNVDEEFLK 694 (857)
Q Consensus 615 ~~~~d~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~v~V~ye~lp~v~~~~~Al~~~~~~~~~~~~~~~Gd~~~a~~~ 694 (857)
....|+|+|++++|+|+|||||+|||+|+++|++|+++|+|+||++|+++|+++|++++++|+.....+..||++++|++
T Consensus 640 ~~~~~~~~la~~~V~y~GqpVa~VvA~t~~~A~~Aa~~V~Veye~lp~v~~~~~Al~~~a~~~~~~~~~~~Gdv~~af~~ 719 (1319)
T PLN02906 640 PVVHDEELFATDVVTCVGQVIGVVVADTQENAKAAARKVKVEYEELPAILSIEEAIEAGSFHPNTERRLEKGDVELCFAS 719 (1319)
T ss_pred CCCCCeeEecCcEEEEcCCeEEEEEECCHHHHHHHhCCCEEEEecCCccCCHHHHhcCCCcccCCCceeecCCHHHHhhc
Confidence 66689999999999999999999999999999999999999999999999999999998877543445688999999998
Q ss_pred --CceeEEEEEEeCcccCCCCCCCceEEEEecCC-CeEEEEeCCCChHHHHHHHHHHhCCCCCCEEEEecccCCCCCCCC
Q psy14046 695 --VDHILEGEVSVGGQEHFYLETNVSVAVPKLED-GCMEIFVSSQHPSEIQEMTAHALGVPSNRIVAKTKRLGGGFGGKE 771 (857)
Q Consensus 695 --a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~-~~l~v~~stQ~p~~~~~~vA~~Lglp~~~V~V~~~~~GGgFGgK~ 771 (857)
++++||++|++++|+|+||||++|+|+|+ ++ |+|+||+|||+|+.+|..||++||||++||+|+++++|||||+|.
T Consensus 720 a~a~~vve~~~~~~~~~H~~mEp~~~~A~~~-~~~g~l~v~~sTQ~p~~~r~~vA~~Lgip~~kVrV~~~~vGGgFGgK~ 798 (1319)
T PLN02906 720 GQCDRIIEGEVQMGGQEHFYLEPNSSLVWTS-DSGNEVHMISSTQAPQKHQKYVAHVLGLPMSKVVCKTKRIGGGFGGKE 798 (1319)
T ss_pred cCCceEEEEEEEECCccccccCCCeEEEEEe-CCCCEEEEEECCcCHHHHHHHHHHHhCCChHHeEEEeCCcccCccccc
Confidence 79999999999999999999999999995 55 689999999999999999999999999999999999999999999
Q ss_pred CCCccc-------------------------------------c-------CeEE-------------------------
Q psy14046 772 KLQSEL-------------------------------------Y-------GLFT------------------------- 782 (857)
Q Consensus 772 ~~~~~~-------------------------------------y-------G~i~------------------------- 782 (857)
+..... | |+|+
T Consensus 799 ~~~~~~~~~aAlaA~~~gRPVkl~~sReE~~~~~~~R~~~~~~~k~g~~~dG~I~a~~~~~~~d~Ga~~~~~~~v~~~~~ 878 (1319)
T PLN02906 799 TRSAFIAAAAAVPAYLLNRPVKLTLDRDVDMMITGQRHAFLGKYKVGFTNEGKILALDLEIYNNGGNSLDLSGAVLERAM 878 (1319)
T ss_pred cccchHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCccceEEEEEEEECCCCCEEEEEEEEEecCcccCCcchHHHHHHH
Confidence 864211 1 6766
Q ss_pred ----------E-----------------Ee-----hhHHHHHHHHHHHHHHcCCCHHHHHHhcCCcCCCccccccccCCC
Q psy14046 783 ----------E-----------------VR-----EDDWIAETMGHHVAQFLKLDYADFARSNLFVTGNLTHYNQVLEHC 830 (857)
Q Consensus 783 ----------~-----------------~r-----q~~~a~E~~id~iA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~ 830 (857)
| +| |++|++|++||++|++|||||+|||++|++++|+.+++|+.++++
T Consensus 879 ~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~g~~~~~g~~~~~~ 958 (1319)
T PLN02906 879 FHSDNVYEIPNVRIVGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRIAVELNKSPEEIREMNFQGEGSVTHYGQVLQHC 958 (1319)
T ss_pred HhcCCCccCcceEEEEEEEECCCCCCCcccCCCHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCCCcCCccccCC
Confidence 1 23 999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhCCChhHHHHHHhhcC
Q psy14046 831 TLGRCFEQVHESGKYKERRKQCEEFNR 857 (857)
Q Consensus 831 ~~~~~l~~~~~~~~~~~r~~~~~~fN~ 857 (857)
.+++||+++++.++|++|++++++||+
T Consensus 959 ~~~~~l~~~~~~~~~~~r~~~~~~~~~ 985 (1319)
T PLN02906 959 TLPQLWDELKVSCDFLKRREEVDEFNA 985 (1319)
T ss_pred CHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 999999999999999999999999985
No 2
>TIGR02969 mam_aldehyde_ox aldehyde oxidase. Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.
Probab=100.00 E-value=6.2e-167 Score=1564.76 Aligned_cols=795 Identities=41% Similarity=0.709 Sum_probs=709.0
Q ss_pred CCCceEEEcCcCCCCCCCCcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHhCCCCCCHHHHHHHHhCCcccCCCChhHHH
Q psy14046 1 MHGLAVTTVEGIGSTKTKLHPVQERLAKAHGSQCGFCTPGIVMSMYALLRSLPGKPTMKDMEVALQGNLCRCTGYRPILE 80 (857)
Q Consensus 1 ~~g~~i~Tveg~~~~~~~~~~iq~~~~~~~~~qCGfCtpg~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCrCtgy~~i~~ 80 (857)
++|++|+|||||++.++.|||||++|+++||+|||||||||||++++||+++|. ||++||+++|+|||||||||++|++
T Consensus 77 ~~g~~v~TvEgl~~~~~~l~pvq~a~~~~~~~QCGfCtpG~vm~~~~ll~~~~~-p~~~~i~~~l~gnlCRCtgY~~i~~ 155 (1330)
T TIGR02969 77 LYGAAVTTVEGIGSTRTRLHPVQERIAKCHGTQCGFCTPGMVMSMYALLRNHPE-PTLDQLTDALGGNLCRCTGYRPIID 155 (1330)
T ss_pred hCCCEEEecCCcCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHHcCCC-CCHHHHHHHhcCCcccCCCCHHHHH
Confidence 589999999999864468999999999999999999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHHHhhhhcccccCCCCCcCCCCCCCcccCC--CCCccCCCC--C--CC---chhhhccCCCCCCCCCCCCCCCCCC
Q psy14046 81 GFKTFTEEWERDRLTNGTNGINGSVQNGNGVCAM--GENCCKNKK--P--GD---EEEKEELFSPSEFTPYDKSQEPTFP 151 (857)
Q Consensus 81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~--~~~c~~~~~--~--~~---~~~~~~~~~~~~~~~~~~~~~~~fp 151 (857)
|+++++.+ . +||.. +.+||.++. . .+ +....++++.+++.+|++.+++|||
T Consensus 156 a~~~~~~~-~-------------------~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fp 215 (1330)
T TIGR02969 156 ACKTFCKT-S-------------------GCCQSKENGVCCLDQGINGLPEFEEGDETSPELFSEEEFLPLDPTQELIFP 215 (1330)
T ss_pred HHHHHhhc-c-------------------CCchhccccCccccccccccccccccccccccccchhcccCCCccccccCC
Confidence 99999865 1 13322 235664211 0 01 1011245666778889999999999
Q ss_pred ccccccc-cCCccceeeecCCcEEEccCCHHHHHHHHHhCCCCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCcee
Q psy14046 152 PELQLND-TYDKEYLQIRGPRATWYRPQTLTQLLELKAKFPEAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRV 230 (857)
Q Consensus 152 ~~l~~~~-~~~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~ 230 (857)
|+|+... .+....+.+.+...+|++|+||+||+++|+++|++++|||||||+++++++...++.+|||++|+||+.|+.
T Consensus 216 ~~l~~~~~~~~~~~~~~~~~~~~~~~P~tl~ea~~ll~~~~~a~lvAGGTdl~~~~k~~~~~~~~lIdi~~I~EL~~i~~ 295 (1330)
T TIGR02969 216 PELMRMAEKQPQRTRVFYSERMMWISPVTLKELLEAKFKYPQAPVVMGNTSVGPEVKFKGVFHPVIISPDRIEELSVVNH 295 (1330)
T ss_pred hhHhhcccccccceeeecCCCceEECCCCHHHHHHHHHhCCCCEEEecCcchHHHhhhccCCCCeEEECCCChhhhcEEE
Confidence 9997421 111122666666689999999999999999999999999999999999999889999999999999999999
Q ss_pred cCCeEEEcccccHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccCCCCCHHHHHhhcCcEE
Q psy14046 231 EENGVWIGGATSLNDMRAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGSPISDMNPILMAARCRL 310 (857)
Q Consensus 231 ~~~~l~IGA~vTl~~l~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~asp~sDl~p~LlAldA~v 310 (857)
++++|+|||+|||+++++.+.+.+.++|+.+.+.+|.|++++++|||+||||+||||||||++||+||++|+|+||||+|
T Consensus 296 ~~~~l~IGA~vT~~el~~~l~~~i~~~p~~~~~~~p~L~~a~~~ias~qIRN~gTlGGNi~~asP~sD~~p~LlAl~A~v 375 (1330)
T TIGR02969 296 TGDGLTLGAGLSLAQVKDILADVVQKLPEETTQTYRALLKHLGTLAGSQIRNMASLGGHIISRHLDSDLNPLLAVGNCTL 375 (1330)
T ss_pred cCCEEEEeccccHHHHHHHHHHhhhcCchhhhHHHHHHHHHHHHhCChhhcccccchhhcccCCCchhHHHHHHHcCcEE
Confidence 99999999999999999998888777787777899999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCeEEEEcccccc-cccccccCCCCcEEEEEEecCCCccchhhheeeeccCCCchhheeeeEEEEEeecCCceE
Q psy14046 311 LLESKAEGTREVTMDGSFY-TSYRKNIVRPDEVLRAIYIPHTAETQYFKAYKQARRRDDDIAIVNAAFNVTLDIQSDGAV 389 (857)
Q Consensus 311 ~l~s~~~G~R~vpl~e~F~-~g~~~t~L~~~EiI~~I~iP~~~~~~~~~~~K~~~R~~~d~a~v~~A~~~~~~~~~~~~~ 389 (857)
+|.+. +|+|+||++| || .+|++|.|+++|||++|.||.+..+.++.+||+++|+++|||+||+|+.++++++++ +
T Consensus 376 ~l~s~-~g~R~vpl~d-ff~~~~~~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~V~~A~~v~l~~~~~--~ 451 (1330)
T TIGR02969 376 NLLSK-EGKRQIPLSE-QFLSKCPDADLKPQEILVSVNIPYSRKWEFVSAFRQAQRQQNALAIVNSGMRVFFGEGDG--I 451 (1330)
T ss_pred EEecC-CceEEEehHH-hhhcccccccCCCCceEEEEEecCCCCccceeEEEEcCCccccHHHhhheEEEEEEcCCC--E
Confidence 99999 8999999999 77 689999999999999999998765557779999999999999999999999952246 9
Q ss_pred EeEeEEEEecCCCcceeHHHHHHHHhCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy14046 390 VKDCEFAFGGMAPTTVLAKKTTEQMINKPWNQSLLEDTWRNLMADLPLDHSAPGGMIQYRRSLTLSLFYKFYIAVSVDTQ 469 (857)
Q Consensus 390 i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~~i~~p~~d~~gs~~YRr~la~~ll~r~l~~~~~~~~ 469 (857)
|+++||+||||+++|+|+.++|++|.||+|+++++++|.+.+.+++.+|.+|+++|++||++|+.+||+|||++++.+++
T Consensus 452 i~~aria~Ggvap~p~ra~~~E~~L~Gk~~~~~~~~~A~~~l~~~~~p~~~d~r~sa~YRr~la~~ll~kf~~~~~~~~~ 531 (1330)
T TIGR02969 452 IRELSISYGGVGPTTICAKNSCQKLIGRPWNEEMLDTACRLILDEVSLAGSAPGGKVEFKRTLIISFLFKFYLEVSQILK 531 (1330)
T ss_pred EeEEEEEEEcCcCceecHHHHHHHhcCCCCCHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999999999999778889999999999999999999999997763
Q ss_pred ------CCCCCCCCCCCcccccCCCCCCcceeeeecccCCCCCchhHhhhhcCCCcccccCCcccCCCCccccCCCCCcc
Q psy14046 470 ------VTPISSRDKSGAQTFHTLPTKSSQYFQVFRVKSGPGGSLIRDLADALPPSLTRLAPYFQVPSTQAKSDLVGRPI 543 (857)
Q Consensus 470 ------~~~~~~~~~s~~~~~~~~~~~~~q~~~~~~~~~~~~g~~~~~aa~~~p~~~~~~~~~~~~~~~~~~~~~iG~~~ 543 (857)
.+.+++.+.|+.+.++||.++|.|.|+. ++..+...++||+++
T Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~vGk~v 580 (1330)
T TIGR02969 532 RMDPGHYPSLADKYESALEDLHSKHHWSTLKHQN-------------------------------VDSMQLPQDPIGHPI 580 (1330)
T ss_pred cccccccccCChhhccccccccCCCCccccceec-------------------------------ccccccccCcCCCCC
Confidence 1246677889999999999999999985 222233448899999
Q ss_pred ccccccccCccceecccCcCCCCCcEEEEEEeCCCCCeEEecCCchhhhhCCCeEEEEecCCCCCCCCCCCccccccccc
Q psy14046 544 VHASAFKQATGEAIYCDDIPKYQTELYLAFVVSSKPHAKILSVDPSAALAMEGVRGWVDERDVPGQKNYVGGIIHDDVIF 623 (857)
Q Consensus 544 ~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~vvt~~Dip~~~~~~g~~~~d~~~~ 623 (857)
+|+|+..||||+++|++|++.+|||||+++||||++||+|++||+++|++||||++|+|++|+|+.| .. .++++|
T Consensus 581 ~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahArI~sID~s~A~~~pGV~~V~t~~Dvp~~~-~~----~~~~~l 655 (1330)
T TIGR02969 581 MHLSGVKHATGEAIYCDDMPAVDQELFLTFVTSSRAHAKIVSIDLSEALSLPGVVDIITAEHLQDAN-TF----GTEKLL 655 (1330)
T ss_pred cChhhHhhccccccccCCCCCCCCCEEEEEEecCCCceEEEeeeHHHHhcCCCeEEEEeHHHCCCCC-CC----CCeeec
Confidence 9999999999999999999437999999999999999999999999999999999999999999655 33 378999
Q ss_pred cCCeEeecCCeEEEEEECCHHHHHHHhccceeEEeeC-CCCCCHHHHHhcCCCCCCCCccccCCChhhhhhcCceeEEEE
Q psy14046 624 ARDVVTCVGQPIGGVIAEDQLIAQRAAALVKVTYEEL-PAIFSIQEAIEHKSFFNLEPSVYGRGNVDEEFLKVDHILEGE 702 (857)
Q Consensus 624 a~~~V~y~GqpVa~VvAet~~~A~~Aa~~v~V~ye~l-p~v~~~~~Al~~~~~~~~~~~~~~~Gd~~~a~~~a~~vve~~ 702 (857)
++++|+|+||||++|||+|+++|++|+++|+|+||++ |+++|+++|+++++++.. ...+..||++++|++|+++||++
T Consensus 656 a~~~Vr~~Gqpva~VvAet~~~A~~Aa~~V~VeYe~l~~~v~d~~~Al~~~a~~~~-~~~~~~Gdv~~af~~a~~vve~~ 734 (1330)
T TIGR02969 656 ATDKVHCVGQLVCAVIADSEVQAKQAAKHVKIVYRDLEPLILTIEEAIQHKSFFEP-ERKLEYGNVDEAFKVVDQILEGE 734 (1330)
T ss_pred CCCeEEEcCCeEEEEEECCHHHHHHHhcCCEEEEecCCCCcCCHHHHhcCCCEecc-cccccCCchhhhhccCCEEEEEE
Confidence 9999999999999999999999999999999999999 567999999998876543 34568899999999999999999
Q ss_pred EEeCcccCCCCCCCceEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCCEEEEecccCCCCCCCCCCCcc--c---
Q psy14046 703 VSVGGQEHFYLETNVSVAVPKLEDGCMEIFVSSQHPSEIQEMTAHALGVPSNRIVAKTKRLGGGFGGKEKLQSE--L--- 777 (857)
Q Consensus 703 ~~~~~~~H~~mEp~~~~a~~~~~~~~l~v~~stQ~p~~~~~~vA~~Lglp~~~V~V~~~~~GGgFGgK~~~~~~--~--- 777 (857)
|++++|+|+||||++|+|+|++++|+|+||+|||+|+.+|..||++||||.+||+|+++++|||||+|.+.... .
T Consensus 735 y~~~~~~H~~mEp~~~~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aA 814 (1330)
T TIGR02969 735 IHMGGQEHFYMETQSMLVVPKGEDQEMDVYVSTQFPKYIQDIVAATLKLPVNKVMCHVRRVGGAFGGKVGKTSIMAAITA 814 (1330)
T ss_pred EEECCEeecccCCCEEEEEEeCCCCeEEEEECCcCHHHHHHHHHHHhCCCHHHeEEEeCCcccCcccccccccHHHHHHH
Confidence 99999999999999999999533578999999999999999999999999999999999999999999986521 1
Q ss_pred --------------------------------c-------CeEE-----------------------------------E
Q psy14046 778 --------------------------------Y-------GLFT-----------------------------------E 783 (857)
Q Consensus 778 --------------------------------y-------G~i~-----------------------------------~ 783 (857)
| |+|+ |
T Consensus 815 ~aA~~~gRPVk~~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn 894 (1330)
T TIGR02969 815 FAANKHGRAVRCTLERGEDMLITGGRHPYLGKYKAGFMNDGRIVALDVEHYSNGGSSLDESLWVIEMGLLKMDNAYKFPN 894 (1330)
T ss_pred HHHHHhCCCEEEEecHHHHhhhcCCcCceEEEEEEEECCCCCEEEEEEEEEEecccccCcchHHHHHHHHhcCCCccCCc
Confidence 1 6666 1
Q ss_pred -----------------Ee-----hhHHHHHHHHHHHHHHcCCCHHHHHHhcCCcCCCccccccccCCCcHHHHHHHHHH
Q psy14046 784 -----------------VR-----EDDWIAETMGHHVAQFLKLDYADFARSNLFVTGNLTHYNQVLEHCTLGRCFEQVHE 841 (857)
Q Consensus 784 -----------------~r-----q~~~a~E~~id~iA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~~~~~l~~~~~ 841 (857)
+| |++|++|++||++|++|||||+|||++|++++|+.+++|++++++++++||+++++
T Consensus 895 ~~~~~~~v~TN~~~~~a~RG~G~~q~~fa~E~~mD~lA~~lg~DP~e~R~~N~~~~gd~~p~~~~~~~~~~~~~l~~~~~ 974 (1330)
T TIGR02969 895 LRCRGWACRTNLPSNTAFRGFGFPQAGLITEACITEVAAKCGLSPEKVRTINMYKEIDQTPYKQEINAKNLFQCWRECMA 974 (1330)
T ss_pred EEEEEEEEECCCCCCCccCCCchHHHHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCcccCCCCcccCCCcHHHHHHHHHH
Confidence 23 99999999999999999999999999999999999999999999999999999999
Q ss_pred hCCChhHHHHHHhhcC
Q psy14046 842 SGKYKERRKQCEEFNR 857 (857)
Q Consensus 842 ~~~~~~r~~~~~~fN~ 857 (857)
.++|++|+++++.||+
T Consensus 975 ~~~~~~r~~~~~~~~~ 990 (1330)
T TIGR02969 975 KSSYSERKVAVEKFNA 990 (1330)
T ss_pred hcCHHHHHHHHHHHhc
Confidence 9999999999888874
No 3
>KOG0430|consensus
Probab=100.00 E-value=1.1e-158 Score=1382.58 Aligned_cols=763 Identities=42% Similarity=0.729 Sum_probs=683.4
Q ss_pred CCCceEEEcCcCCCCCCCCcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHhCCCCCCHHHHHHHHhCCcccCCCChhHHH
Q psy14046 1 MHGLAVTTVEGIGSTKTKLHPVQERLAKAHGSQCGFCTPGIVMSMYALLRSLPGKPTMKDMEVALQGNLCRCTGYRPILE 80 (857)
Q Consensus 1 ~~g~~i~Tveg~~~~~~~~~~iq~~~~~~~~~qCGfCtpg~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCrCtgy~~i~~ 80 (857)
++|++|||+||||++..++||||++|++.||+|||||||||||+||+||+|++..||.+||+++|+||||||||||||+|
T Consensus 76 ~~g~~VtT~EGlGn~~~g~HPiq~RlA~~hgsQCGFCtPG~vmsmYalL~n~~~~~T~~eie~a~~GNLCRCTGYRPIld 155 (1257)
T KOG0430|consen 76 VHGLEVTTSEGLGNRRDGYHPIQERLAKMHGSQCGFCTPGFVMSMYALLRNSKNSPTMEEIENAFGGNLCRCTGYRPILD 155 (1257)
T ss_pred ccceEEEeeecccccccCcCcHHHHHhhccCCcccCCCccHHHHHHHHHHhCCCCCCHHHHHHhhccceeeecCCchHHH
Confidence 58999999999999888999999999999999999999999999999999999559999999999999999999999999
Q ss_pred HHHHHHHhhhhcccccCCCCCcCCCCCCCcccCCC-CCccCCCCCCCchhhhccCCCCCCCCCCCCCCCCCCcccccccc
Q psy14046 81 GFKTFTEEWERDRLTNGTNGINGSVQNGNGVCAMG-ENCCKNKKPGDEEEKEELFSPSEFTPYDKSQEPTFPPELQLNDT 159 (857)
Q Consensus 81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~-~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fp~~l~~~~~ 159 (857)
|+|+||.+. ++|.+| +.-|+. ..+++...+ +||||+++++|||+|+..
T Consensus 156 A~kSFa~d~--------------------~~~~~g~~~~~~~--------~~~~~~~~~-~~~dp~~~~i~~pe~~~~-- 204 (1257)
T KOG0430|consen 156 AMKSFAVDS--------------------DICGPGCDGFSIA--------EEKDIEDLS-PPYDPKKELIFPPELLKR-- 204 (1257)
T ss_pred HHhhhccCC--------------------CccccCccccccc--------ccccccccc-CCCCCccCcccChHHhcc--
Confidence 999999763 355443 222321 123445566 799999999999999853
Q ss_pred CCccceeeecCCcEEEccCCHHHHHHHHHhCCCCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEcc
Q psy14046 160 YDKEYLQIRGPRATWYRPQTLTQLLELKAKFPEAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGG 239 (857)
Q Consensus 160 ~~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA 239 (857)
... ..+...+.+|++|.||+|++++++++|++++++|||..+++++.+. ++++||++.|+||+.++.++++|+|||
T Consensus 205 -~~~-~~~~~~~~~W~~P~sl~eL~~~~~~~~~~~Lv~GNT~~gv~~r~~~--~~~~Id~~~v~el~~~~~~~~gi~lGa 280 (1257)
T KOG0430|consen 205 -KKT-TLLGNDGIRWYWPVSLEELFELKANKPDAKLVAGNTAHGVYRRSPD--YQKFIDVSGVPELKALNVDDNGLELGA 280 (1257)
T ss_pred -ccc-cccCCCCcEEeCcccHHHHHHHHhcCcceEEEeccccceEEeccCC--CcceechhcCchhhhcccCCCceEEcc
Confidence 112 4556678999999999999999999999999999999999998876 889999999999999888999999999
Q ss_pred cccHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccCC----CCCHHHHHhhcCcEEEEEEc
Q psy14046 240 ATSLNDMRAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGSP----ISDMNPILMAARCRLLLESK 315 (857)
Q Consensus 240 ~vTl~~l~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~asp----~sDl~p~LlAldA~v~l~s~ 315 (857)
++||+++.+.+++..+ +|.. +.|+.+.+|+++||++||||.|||||||+.++| .||++++|+|+||+|++.+.
T Consensus 281 ~~sls~~~~~l~~~~~-~~~~--~~~~~~~~hl~~~A~~~IRN~atigGnI~~~~~~~~f~SDl~~~l~a~~a~v~~~~~ 357 (1257)
T KOG0430|consen 281 ALSLSETMELLRKLVK-RPGF--EYFKALWEHLKWFANVQIRNVGTIGGNICTKAQSPEFPSDLFILLEALDAKVTILNN 357 (1257)
T ss_pred cccHHHHHHHHHHHHh-CcHH--HHHHHHHHHHHHhcccceeccccccceeEeccCCCCCchhHHHHHHhhccEEEEeec
Confidence 9999999999998776 5543 799999999999999999999999999999999 79999999999999999987
Q ss_pred CCCeEEEEcccccccccccccCCCCcEEEEEEecCCCccchhhheeeeccCCCchhheeeeEEEEEeecCCceEEeEeEE
Q psy14046 316 AEGTREVTMDGSFYTSYRKNIVRPDEVLRAIYIPHTAETQYFKAYKQARRRDDDIAIVNAAFNVTLDIQSDGAVVKDCEF 395 (857)
Q Consensus 316 ~~G~R~vpl~e~F~~g~~~t~L~~~EiI~~I~iP~~~~~~~~~~~K~~~R~~~d~a~v~~A~~~~~~~~~~~~~i~~~ri 395 (857)
.+. +++.||.+|+++.|.+.|||.+|.||...+ +|.+||+++|+++|+|+||++|+..+ + +|+++||
T Consensus 358 -~~~----~~~~~l~~y~~~~l~~~~illsv~ip~~~~--~f~~~k~a~R~e~a~a~vNa~fl~e~----~--~V~~~~i 424 (1257)
T KOG0430|consen 358 -SGD----LEKVFLEEYLGSSLGAKEILLSVVLPASRK--YFESYKQAPRRENAIAYVNAAFLAEV----G--KVSSARI 424 (1257)
T ss_pred -CCc----cceeeHhhhhccccCcceEEEEEEccCcHH--HHHHHHhcccccchhhhhhHHhhhcc----c--eeeeeeE
Confidence 442 444477777888899999999999999875 88999999999999999999887754 3 8999999
Q ss_pred EEecCCCcceeHHHHHHHHhCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccccCCCCCC
Q psy14046 396 AFGGMAPTTVLAKKTTEQMINKPWNQSLLEDTWRNLMADLPLDHSAPGGMIQYRRSLTLSLFYKFYIAVSVDTQVTPISS 475 (857)
Q Consensus 396 a~Ggv~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~~i~~p~~d~~gs~~YRr~la~~ll~r~l~~~~~~~~~~~~~~ 475 (857)
+|||++|..+++.++|+.|.|+.|+++.+++|+..|..++.++. |+++.+||+.||.+||||||+.+.++++ ...
T Consensus 425 ~fGg~~p~~i~a~~~~~~~~gk~~~~~ll~~a~~lL~~~l~~~~--p~~~~~yR~~La~sfffKF~l~~~~~~~---~~~ 499 (1257)
T KOG0430|consen 425 CFGGIAPDFIHAKKTEELLLGKPWEEELLEDAFGLLQSDLVPDE--PGGMPEYRKKLALGFFFKFLLKVAHKVK---NGN 499 (1257)
T ss_pred eecCcCcchhhhhhHHHHhhcccccHHHHHHHHHhhhhhccCCC--CCCcHHHHHHHHHHHHHHHHHHHhhhcc---ccC
Confidence 99999999999999999999999999999999999999998443 8999999999999999999999999873 112
Q ss_pred CCCCCcccccCCCCCCcceeeeecccCCCCCchhHhhhhcCCCcccccCCcccCCCCccccCCCCCccccccccccCccc
Q psy14046 476 RDKSGAQTFHTLPTKSSQYFQVFRVKSGPGGSLIRDLADALPPSLTRLAPYFQVPSTQAKSDLVGRPIVHASAFKQATGE 555 (857)
Q Consensus 476 ~~~s~~~~~~~~~~~~~q~~~~~~~~~~~~g~~~~~aa~~~p~~~~~~~~~~~~~~~~~~~~~iG~~~~r~d~~~kvtG~ 555 (857)
...++.....+|.+++.|.|.+ ....++||+|+.++.+..|+|||
T Consensus 500 ~~~~g~~~~~~~~ls~~Q~~~~-----------------------------------~q~~~pVG~pi~~~~a~~qaSGE 544 (1257)
T KOG0430|consen 500 KFITGGSLLARPLLSGGQQFET-----------------------------------TQEHYPVGRPVEKLEALIQASGE 544 (1257)
T ss_pred CccCCCccccccccccceeecC-----------------------------------CCCCCcCcchhhhhhhhhhcccc
Confidence 2334455667788888777764 23388999999999999999999
Q ss_pred eecccCcCCCCCcEEEEEEeCCCCCeEEecCCchhhhhCCCeEEEEecCCCCCCCC-CCCcc--ccccccccCCeEeecC
Q psy14046 556 AIYCDDIPKYQTELYLAFVVSSKPHAKILSVDPSAALAMEGVRGWVDERDVPGQKN-YVGGI--IHDDVIFARDVVTCVG 632 (857)
Q Consensus 556 a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~vvt~~Dip~~~~-~~g~~--~~d~~~~a~~~V~y~G 632 (857)
|.|+||||.+++.||++||.|+++||+|+|||+++|+++|||+++++++|+|+.|+ .+++. ..|+++||+++|+|+|
T Consensus 545 AvY~dDip~~~n~lh~aFV~St~p~A~I~sID~seAl~~~GVv~~~~akDiPg~n~~~i~~~~~~~de~lFA~~~v~~~G 624 (1257)
T KOG0430|consen 545 ATYVDDIPTPPNTLHAAFVLSTKPHAKILSIDASEALKLPGVVAFFSAKDIPGNNMKNIGNMFFPEDEELFATDVVTCVG 624 (1257)
T ss_pred eEEecCCCCCCCeeEEEEEEcccCCcEEeeecchhhcCCCceEEEEecccCCCCCccccccccCCCccceeecceeEEcC
Confidence 99999999999999999999999999999999999999999999999999999882 12221 5799999999999999
Q ss_pred CeEEEEEECCHHHHHHHhccceeEEeeC-CCCCCHHHHHhcCCCCCCCCccccCCChhhhh--hcCceeEEEEEEeCccc
Q psy14046 633 QPIGGVIAEDQLIAQRAAALVKVTYEEL-PAIFSIQEAIEHKSFFNLEPSVYGRGNVDEEF--LKVDHILEGEVSVGGQE 709 (857)
Q Consensus 633 qpVa~VvAet~~~A~~Aa~~v~V~ye~l-p~v~~~~~Al~~~~~~~~~~~~~~~Gd~~~a~--~~a~~vve~~~~~~~~~ 709 (857)
|||++|||+|.++|++||++|+|+|+++ |+++++++|+++.++++. +..+..+++...+ .++|.++||++++++|+
T Consensus 625 Q~ig~ivAdt~~~A~rAA~lVkv~Y~~l~p~I~t~e~Ai~~~s~~~~-~~~~~~~~~~~~~~~~~~d~i~~Ge~~mG~Qe 703 (1257)
T KOG0430|consen 625 QPIGVIVADTHELAKRAAKLVKVEYEELPPPILPSEDAVKDKSLSET-EPRLRKGDVGKSFQLEECDKILEGELDMGGQE 703 (1257)
T ss_pred cEEEEEEeCCHHHHHHhhhceEEEeccCCCceecHHHHHhhhcccCC-CccccccCccccccccccceeEEEEEEeccee
Confidence 9999999999999999999999999999 679999999999887765 5666777766666 55799999999999999
Q ss_pred CCCCCCCceEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCCEEEEecccCCCCCCCCCCCccc------------
Q psy14046 710 HFYLETNVSVAVPKLEDGCMEIFVSSQHPSEIQEMTAHALGVPSNRIVAKTKRLGGGFGGKEKLQSEL------------ 777 (857)
Q Consensus 710 H~~mEp~~~~a~~~~~~~~l~v~~stQ~p~~~~~~vA~~Lglp~~~V~V~~~~~GGgFGgK~~~~~~~------------ 777 (857)
|||||||+++|+|+ + |+|+||+|||||..+|..||++||||.|||+|+++|+|||||||.++..++
T Consensus 704 HFYmEtQttl~vP~-e-~el~v~~STQ~~~~tQ~~VA~~Lgipa~~V~v~trRvGGGFGGK~trs~~VA~a~ALaA~Kl~ 781 (1257)
T KOG0430|consen 704 HFYMEPQTTLVVPF-E-GELQVYSSTQWPDFTQSVVAHVLGLPANKVQVKTRRLGGGFGGKETRSNPVAAAAALAAYKLN 781 (1257)
T ss_pred EEEeccceeEEeec-C-CeEEEEEcCcCcHHHHHHHHHHhCCCccceEEEEEeeccccccccccccHHHHHHHHHHHHhC
Confidence 99999999999995 4 499999999999999999999999999999999999999999999998654
Q ss_pred -------------------------c-------CeEE----------------------------------E--------
Q psy14046 778 -------------------------Y-------GLFT----------------------------------E-------- 783 (857)
Q Consensus 778 -------------------------y-------G~i~----------------------------------~-------- 783 (857)
| |||+ +
T Consensus 782 RPvr~~l~r~~dM~itG~Rhp~~~~Ykvgf~~~GkI~aL~~~~~~naG~s~d~S~~~~~~~~~~~n~Y~~~~~r~~G~~c 861 (1257)
T KOG0430|consen 782 RPVRFVLSRESDMIITGKRHPFHGKYKVGFKSDGKILALDLEFYENAGWSKDESPSVLRAMFHSDNVYEIGDVRFDGYVC 861 (1257)
T ss_pred CCEEEEecchhhhhhcCCccceEEeEEEEEccCCeEEEEehhhhhccCCCcCcchHHHhhhhhhhheecccceeeeeeEE
Confidence 2 8877 1
Q ss_pred ---------Ee-----hhHHHHHHHHHHHHHHcCCCHHHHHHhcCCcCCCccccccccCCCcHHHHHHHHHHhCCChhHH
Q psy14046 784 ---------VR-----EDDWIAETMGHHVAQFLKLDYADFARSNLFVTGNLTHYNQVLEHCTLGRCFEQVHESGKYKERR 849 (857)
Q Consensus 784 ---------~r-----q~~~a~E~~id~iA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~~~~~l~~~~~~~~~~~r~ 849 (857)
+| |+++++|++|+++|.++|+||.|+|++|+|++|+.+++++.++.+.+++||+++.+.++|++|+
T Consensus 862 kTN~pSnTa~Rg~G~pQG~~i~E~iie~VA~~~g~d~eeVR~~N~y~eg~~~~~~~~~~~~~l~~~w~~~~~sS~y~~Rk 941 (1257)
T KOG0430|consen 862 KTNLPSNTAFRGPGSPQGILITENIIERIAFELGKDPEEVRKINFYVEGSLTYYHGELQHCTLPQLWPECLVSSKFEKRK 941 (1257)
T ss_pred ecCCCCcchhcCCCChhhHHHHHHHHHHHHHHhCCCHHHHhhhhhhhcccccccCCCcccCcHHHHHHHHHHhchHHHHH
Confidence 23 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcC
Q psy14046 850 KQCEEFNR 857 (857)
Q Consensus 850 ~~~~~fN~ 857 (857)
+++++||+
T Consensus 942 ~ev~~FN~ 949 (1257)
T KOG0430|consen 942 SEIEEFNK 949 (1257)
T ss_pred HHHHHhhh
Confidence 99999996
No 4
>PLN00192 aldehyde oxidase
Probab=100.00 E-value=2.6e-157 Score=1478.67 Aligned_cols=774 Identities=32% Similarity=0.542 Sum_probs=665.1
Q ss_pred CCCceEEEcCcCCCCCCCCcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHhC-----CC------CCCHHHHHHHHhCCc
Q psy14046 1 MHGLAVTTVEGIGSTKTKLHPVQERLAKAHGSQCGFCTPGIVMSMYALLRSL-----PG------KPTMKDMEVALQGNL 69 (857)
Q Consensus 1 ~~g~~i~Tveg~~~~~~~~~~iq~~~~~~~~~qCGfCtpg~v~~~~~ll~~~-----~~------~~~~~~i~~~l~gnl 69 (857)
+||++|+|||||++.++.|||||++|+++||+|||||||||||+||+||+++ |. +||++||+++|+|||
T Consensus 80 ~~g~~i~TvEgl~~~~~~lhpvq~a~~~~~~~QCGfCtpG~vms~~~ll~~~~~~~~~~p~~~~~~~~~~~i~~~l~gnl 159 (1344)
T PLN00192 80 VNGCSITTSEGLGNSKDGFHPIHKRFAGFHASQCGFCTPGMCISLFSALVNADKTDRPEPPSGFSKLTVVEAEKAVSGNL 159 (1344)
T ss_pred hCCCEEEeecCcCCCCCCCCHHHHHHHHcCCCccCCCChHHHHHHHHHHHhcccccCCCcccccCCCCHHHHHHHhcCCc
Confidence 5899999999998645689999999999999999999999999999999663 23 148999999999999
Q ss_pred ccCCCChhHHHHHHHHHHhhhhcccccCCCCCcCCCCCCCcccCCCCCccCCCCCCCchhhhccCCCCCCCCCCCCCCC-
Q psy14046 70 CRCTGYRPILEGFKTFTEEWERDRLTNGTNGINGSVQNGNGVCAMGENCCKNKKPGDEEEKEELFSPSEFTPYDKSQEP- 148 (857)
Q Consensus 70 CrCtgy~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 148 (857)
||||||+||++|+++++.+.+.++ .+.+||+.+. .+. .. ..++|.+|++.+++
T Consensus 160 CRCtgY~~i~~a~~~~~~~~~~~~--------------------~~~~~~~~~~-~~~-~~----~~~~~~~~~~~~~~~ 213 (1344)
T PLN00192 160 CRCTGYRPIVDACKSFAADVDIED--------------------LGLNSFWKKG-ESE-EA----KLSKLPPYNHSDHIC 213 (1344)
T ss_pred eeCCCCHHHHHHHHHHHhhccchh--------------------cccccccccC-Ccc-hh----hhhhcccCCCccccc
Confidence 999999999999999986622110 0123443211 111 00 12468899999998
Q ss_pred CCCccccccccCCccceeeecCCcEEEccCCHHHHHHHHHhCC----CCEEEecCcchhhhhhcCCCCCCeeecCCCCCC
Q psy14046 149 TFPPELQLNDTYDKEYLQIRGPRATWYRPQTLTQLLELKAKFP----EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPE 224 (857)
Q Consensus 149 ~fp~~l~~~~~~~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~----~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~E 224 (857)
+| |+|+... .+...+.+ .++++|++|+||+||+++|+++| ++++|||||||+++ +. ...++++|||++|+|
T Consensus 214 ~~-~~~~~~~-~~~~~~~~-~~~~~~~~P~sl~ea~~ll~~~~~~~~~a~lvAGgTdl~~~-k~-~~~p~~lIdi~~I~E 288 (1344)
T PLN00192 214 TF-PEFLKKE-IKSSLLLD-SSRYRWYTPVSVEELQSLLESNNFDGVSVKLVVGNTGTGYY-KD-EELYDKYIDIRHIPE 288 (1344)
T ss_pred cC-hhhhhcc-cCccceec-CCCceEECcCCHHHHHHHHHhCCCCCCCeEEEEeCCcceee-ec-cCCCCeEEEcCCChh
Confidence 78 7887432 22233444 47899999999999999999995 89999999999884 43 567799999999999
Q ss_pred CCCceecCCeEEEcccccHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccCC---CCCHHH
Q psy14046 225 LTQPRVEENGVWIGGATSLNDMRAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGSP---ISDMNP 301 (857)
Q Consensus 225 L~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~asp---~sDl~p 301 (857)
|++|+.++++|+|||+|||+++++.+.+. .++. ..+|.|++++++|||+||||+||||||||+|+| +||++|
T Consensus 289 L~~I~~~~~~l~IGA~vTl~el~~~l~~~--~~~~---~~~p~L~~~~~~vAs~qIRN~aTlGGNI~~Asp~~p~sD~~p 363 (1344)
T PLN00192 289 LSMIRRDEKGIEIGAVVTISKAIEALREE--SKSE---YVFKKIADHMEKIASRFVRNTGSIGGNLVMAQRKQFPSDIAT 363 (1344)
T ss_pred hhcEEecCCEEEEeecCcHHHHHHHHHhh--cccc---chHHHHHHHHHHhcChhhccceechhhhcccCCCCCchhHHH
Confidence 99999999999999999999999886542 1111 168999999999999999999999999999975 699999
Q ss_pred HHhhcCcEEEEEEcCCCeEEEEcccccccccccccCCCCcEEEEEEecCCC------ccchhhheeeeccC-CCchhhee
Q psy14046 302 ILMAARCRLLLESKAEGTREVTMDGSFYTSYRKNIVRPDEVLRAIYIPHTA------ETQYFKAYKQARRR-DDDIAIVN 374 (857)
Q Consensus 302 ~LlAldA~v~l~s~~~G~R~vpl~e~F~~g~~~t~L~~~EiI~~I~iP~~~------~~~~~~~~K~~~R~-~~d~a~v~ 374 (857)
+|+||||+|+|.+. +|+|+||++| ||.+ +.|++||||++|.||.+. .+.+|..||+++|+ ++|||+||
T Consensus 364 ~LlAl~A~v~l~s~-~g~R~vpl~d-Ff~~---~~l~~~Eil~~I~iP~~~~~~~~~~~~~f~~yk~~~Rr~~~diA~V~ 438 (1344)
T PLN00192 364 ILLAAGSTVNIQNA-SKREKLTLEE-FLER---PPLDSKSLLLSVEIPSWTSSSGSDTKLLFETYRAAPRPLGNALPYLN 438 (1344)
T ss_pred HHHHhCcEEEEEeC-CceEEEeHHH-Hhcc---CccCCcceEEEEEccCCccccccCcccceeeeeecccccccchhhhe
Confidence 99999999999999 8999999999 9985 569999999999999653 24567789999998 88999999
Q ss_pred eeEEEEEee----cCCceEEeEeEEEEecCCC-cceeHHHHHHHHhCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHH
Q psy14046 375 AAFNVTLDI----QSDGAVVKDCEFAFGGMAP-TTVLAKKTTEQMINKPWNQSLLEDTWRNLMADLPLDHSAPGGMIQYR 449 (857)
Q Consensus 375 ~A~~~~~~~----~~~~~~i~~~ria~Ggv~~-~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~~i~~p~~d~~gs~~YR 449 (857)
+||.++++. +++ +|+++||+||||++ +|+|+.++|++|.||+|+++++++|++.+.+++. |.++ ++|++||
T Consensus 439 aA~~v~~~~~~~~~~~--~i~~aria~Ggvap~~P~ra~~~E~~L~Gk~~~~~~l~~A~~~l~~~~~-p~~~-~~s~eYR 514 (1344)
T PLN00192 439 AAFLAEVSQDASSGGI--VVNDCRLAFGAYGTKHAIRARKVEEFLTGKVLSDSVLYEAVRLLKGIVV-PEDG-TSHPEYR 514 (1344)
T ss_pred eeEEEEEEecccCCCC--eEeEEEEEEecCCCCceecHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC-CCCC-CCCHHHH
Confidence 999999861 244 79999999999999 6999999999999999999999999999999998 6554 5799999
Q ss_pred HHHHHHHHHHHHHHHhccccCCCCCCCC-----------CCCcccccCCCCCCcceeeeecccCCCCCchhHhhhhcCCC
Q psy14046 450 RSLTLSLFYKFYIAVSVDTQVTPISSRD-----------KSGAQTFHTLPTKSSQYFQVFRVKSGPGGSLIRDLADALPP 518 (857)
Q Consensus 450 r~la~~ll~r~l~~~~~~~~~~~~~~~~-----------~s~~~~~~~~~~~~~q~~~~~~~~~~~~g~~~~~aa~~~p~ 518 (857)
++|+.+||+|||+++++++. +.+++.+ .|+...++||+++|.|.|++
T Consensus 515 r~la~~l~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~--------------------- 572 (1344)
T PLN00192 515 SSLAVGFLFDFLSPLIESNA-KSSNGWLDGGSNTKQNPDQHDDVKKPTLLLSSKQQVEE--------------------- 572 (1344)
T ss_pred HHHHHHHHHHHHHHHHhhcc-ccccccccccccccccccccccccccCCCCCcceeeec---------------------
Confidence 99999999999999997762 2344444 68888999999999999997
Q ss_pred cccccCCcccCCCCccccCCCCCccccccccccCccceecccCcCCCCCcEEEEEEeCCCCCeEEecCCchhhhhCCCeE
Q psy14046 519 SLTRLAPYFQVPSTQAKSDLVGRPIVHASAFKQATGEAIYCDDIPKYQTELYLAFVVSSKPHAKILSVDPSAALAMEGVR 598 (857)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~ 598 (857)
++++++||++++|+|+..|+||+++|++|++.+|||||+++||||++||+|++||+++|++||||+
T Consensus 573 --------------~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahArI~sID~s~A~~~pGV~ 638 (1344)
T PLN00192 573 --------------NNEYHPVGEPIKKVGAALQASGEAVYVDDIPSPKNCLYGAFIYSTKPLARVKGIKFKSNLVPQGVL 638 (1344)
T ss_pred --------------ccccCcCCCCCcChhhHhhcccceecccccCCCCCCEEEEEEecCCCceEEEEEEhHHhhcCCCcE
Confidence 456689999999999999999999999999547999999999999999999999999999999999
Q ss_pred EEEecCCCC-CCCCCCCc--cccccccccCCeEeecCCeEEEEEECCHHHHHHHhccceeEEee--C-CCCCCHHHHHhc
Q psy14046 599 GWVDERDVP-GQKNYVGG--IIHDDVIFARDVVTCVGQPIGGVIAEDQLIAQRAAALVKVTYEE--L-PAIFSIQEAIEH 672 (857)
Q Consensus 599 ~vvt~~Dip-~~~~~~g~--~~~d~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~v~V~ye~--l-p~v~~~~~Al~~ 672 (857)
+|+|++|+| +.+ .+|. ...|+|+||+++|+|+||||++|||+|+++|++|+++|+|+||+ + |++.|+++|+++
T Consensus 639 aV~t~~Dip~~~~-~~g~~~~~~~~~~la~~~Vr~~Gq~Va~VvA~t~~~A~~Aa~~V~VeYe~~~l~p~v~~i~~Al~~ 717 (1344)
T PLN00192 639 AVITFKDIPKGGQ-NIGSKTIFGPEPLFADEVTRCAGQRIALVVADTQKHADMAANLAVVEYDTENLEPPILTVEDAVKR 717 (1344)
T ss_pred EEEchHHcCcccc-cCCCCCCCCCceeccCCEEEEcCCeEEEEEECCHHHHHHHhccCEEEEecCCCCCcccCHHHHhcC
Confidence 999999998 223 2343 24689999999999999999999999999999999999999997 4 999999999999
Q ss_pred CCCCCCC--CccccCCChhhhhhcCceeE-EEEEEeCcccCCCCCCCceEEEEecCCCeEEEEeCCCChHHHHHHHHHHh
Q psy14046 673 KSFFNLE--PSVYGRGNVDEEFLKVDHIL-EGEVSVGGQEHFYLETNVSVAVPKLEDGCMEIFVSSQHPSEIQEMTAHAL 749 (857)
Q Consensus 673 ~~~~~~~--~~~~~~Gd~~~a~~~a~~vv-e~~~~~~~~~H~~mEp~~~~a~~~~~~~~l~v~~stQ~p~~~~~~vA~~L 749 (857)
+++++.. ......||++++|++|+++| |++|++++|+|+||||++|+|+|+ ++|+|+||+|||+|+.+|..||++|
T Consensus 718 ~s~~~~~~~~~~~~~GD~~~af~~a~~vv~e~~~~~~~q~H~~mEp~~~vA~~~-~dg~l~V~~sTQ~p~~~r~~vA~~L 796 (1344)
T PLN00192 718 SSLFEVPPFLYPKPVGDISKGMAEADHKILSAEIKLGSQYYFYMETQTALALPD-EDNCIVVYSSTQCPEYVHSVIARCL 796 (1344)
T ss_pred CCCcccChhhcccccCCHHHHhccCCeEEEEEEEEECCEeeeeccCceEEEEEc-CCCCEEEEECCCCHHHHHHHHHHHh
Confidence 8764321 12346799999999999977 999999999999999999999995 6778999999999999999999999
Q ss_pred CCCCCCEEEEecccCCCCCCCCCCCccc-------------------------------------c-------CeEE---
Q psy14046 750 GVPSNRIVAKTKRLGGGFGGKEKLQSEL-------------------------------------Y-------GLFT--- 782 (857)
Q Consensus 750 glp~~~V~V~~~~~GGgFGgK~~~~~~~-------------------------------------y-------G~i~--- 782 (857)
|||++||+|+++++|||||+|.+..... | |||+
T Consensus 797 gip~~~VrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVr~~~sR~Edm~~~~~R~~~~~~~k~g~~~dG~I~a~~ 876 (1344)
T PLN00192 797 GIPEHNVRVITRRVGGGFGGKAVKSMPVATACALAAFKLQRPVRMYLNRKTDMIMAGGRHPMKITYSVGFKSDGKITALH 876 (1344)
T ss_pred CCChHHEEEEecccccCCCccccccchHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCcCceEEEEEEEECCCCCEEEEE
Confidence 9999999999999999999998653221 1 7766
Q ss_pred -------------------------------E-----------------Ee-----hhHHHHHHHHHHHHHHcCCCHHHH
Q psy14046 783 -------------------------------E-----------------VR-----EDDWIAETMGHHVAQFLKLDYADF 809 (857)
Q Consensus 783 -------------------------------~-----------------~r-----q~~~a~E~~id~iA~~lg~DP~e~ 809 (857)
| +| |++|++|++||++|++|||||+||
T Consensus 877 ~~~~~d~Ga~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lg~DP~e~ 956 (1344)
T PLN00192 877 LDILINAGISPDISPIMPRNIIGALKKYDWGALSFDIKVCKTNLSSRSAMRAPGEVQGSYIAEAIIEHVASTLSMDVDSV 956 (1344)
T ss_pred EEEEEecccCCCcchHHHHHHhhcCCCcCCCceEEEEEEEECCCCCCCcccCCCHHHHHHHHHHHHHHHHHHhCcCHHHH
Confidence 1 23 999999999999999999999999
Q ss_pred HHhcCCcCCCcc-ccccc---cCCCcHHHHHHHHHHhCCChhHHHHHHhhcC
Q psy14046 810 ARSNLFVTGNLT-HYNQV---LEHCTLGRCFEQVHESGKYKERRKQCEEFNR 857 (857)
Q Consensus 810 R~~Nl~~~g~~~-~~g~~---~~~~~~~~~l~~~~~~~~~~~r~~~~~~fN~ 857 (857)
|++|+++++... +++++ ++++.+++||+++++.++|++|++++++||+
T Consensus 957 R~~Nl~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~n~ 1008 (1344)
T PLN00192 957 RKINLHTYESLKLFYGDSAGEPSEYTLPSIWDKLASSSEFKQRTEMVKEFNR 1008 (1344)
T ss_pred HHhcCCCccccccCCCCcccccCCCcHHHHHHHHHHhcChHHHHHHHHHHhh
Confidence 999999764332 56655 4788999999999999999999999999985
No 5
>COG4630 XdhA Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.6e-95 Score=765.31 Aligned_cols=400 Identities=34% Similarity=0.589 Sum_probs=360.7
Q ss_pred CCCceEEEcCcCCCCCCCCcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHhCCCCCCHHHHHHHHhCCcccCCCChhHHH
Q psy14046 1 MHGLAVTTVEGIGSTKTKLHPVQERLAKAHGSQCGFCTPGIVMSMYALLRSLPGKPTMKDMEVALQGNLCRCTGYRPILE 80 (857)
Q Consensus 1 ~~g~~i~Tveg~~~~~~~~~~iq~~~~~~~~~qCGfCtpg~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCrCtgy~~i~~ 80 (857)
+||++|+|||+|+..++.||||||+|+++|||||||||||||||||+|..+.+. |+.+.|+++|+|||||||||+||++
T Consensus 82 L~G~hvvTvE~L~~~~g~LHpVQqamvd~hGSQCGfCTPGFVmSLyal~~~~~~-P~~a~i~kALqGNLCRCTGY~pI~~ 160 (493)
T COG4630 82 LDGTHVVTVEHLRGQDGTLHPVQQAMVDFHGSQCGFCTPGFVMSLYALWMNSPT-PSRAAIEKALQGNLCRCTGYRPIIR 160 (493)
T ss_pred cCCceEEEehhhcCCCCCcCHHHHHHHhccCCccCCcCchHHHHHHHHHhcCCC-CchhHHHHHhhCCcccccCchHHHH
Confidence 689999999999985666999999999999999999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHHHhhhhcccccCCCCCcCCCCCCCcccCCCCCccCCCCCCCchhhhccCCCCCCCCCCCCCCCCCCccccccccC
Q psy14046 81 GFKTFTEEWERDRLTNGTNGINGSVQNGNGVCAMGENCCKNKKPGDEEEKEELFSPSEFTPYDKSQEPTFPPELQLNDTY 160 (857)
Q Consensus 81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fp~~l~~~~~~ 160 (857)
|....+.... +..|.|.....+.+- +.|. ...
T Consensus 161 AA~~~~a~~~---------------------------------------------~a~fDPl~~~R~~~~-~~L~--A~~ 192 (493)
T COG4630 161 AAEAIAALGP---------------------------------------------AAGFDPLAARRTAIT-ARLR--ALR 192 (493)
T ss_pred HHHHHhccCC---------------------------------------------cccCChhhhhHHHHH-HHHh--hcc
Confidence 9987654311 011112111111110 1111 122
Q ss_pred CccceeeecCCcEEEccCCHHHHHHHHHhCCCCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEccc
Q psy14046 161 DKEYLQIRGPRATWYRPQTLTQLLELKAKFPEAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGA 240 (857)
Q Consensus 161 ~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~ 240 (857)
...++.+.++.-.++.|.||+++..+++.+|+++||||+||++++..+.......+|-+++|+||+.|++..++|+|||+
T Consensus 193 ~~e~v~~~~~~~r~~~P~~l~D~a~l~aa~P~AtivAGsTDvgLwVtk~mr~l~~vi~v~~l~eL~~i~~~~~~l~iGAg 272 (493)
T COG4630 193 DTETVEVGSGDDRFIVPATLADFADLLAAHPGATIVAGSTDVGLWVTKQMRDLNPVIFVGHLAELRRIEVSTGGLEIGAG 272 (493)
T ss_pred CCcEEEecCCCceeEeeccHHHHHHHHhhCCCCEEEecCcchhhHHHHHHhhcCCeEEecchhhhheeeecCCcEEEccC
Confidence 34567777777889999999999999999999999999999999988777767779999999999999999999999999
Q ss_pred ccHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccCCCCCHHHHHhhcCcEEEEEEcCCCeE
Q psy14046 241 TSLNDMRAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGSPISDMNPILMAARCRLLLESKAEGTR 320 (857)
Q Consensus 241 vTl~~l~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~asp~sDl~p~LlAldA~v~l~s~~~G~R 320 (857)
+||++....+. ..+|.|.+...+|||.||||||||||||+|+||++|.+|+|+||||+|+|.++ +|.|
T Consensus 273 vt~t~a~~~la-----------~~~P~l~~L~~r~gg~qvRN~gTlGGNIangSPIGDtPPaLIALgA~ltLr~g-~~~R 340 (493)
T COG4630 273 VTYTQAYRALA-----------GRYPALGELWDRFGGEQVRNMGTLGGNIANGSPIGDTPPALIALGATLTLRSG-DGRR 340 (493)
T ss_pred ccHHHHHHHHH-----------hhCchHHHHHHHhcchhhhccccccccccCCCcCCCCCchhhhcCcEEEEEec-CCcc
Confidence 99999998864 57899999999999999999999999999999999999999999999999999 8999
Q ss_pred EEEcccccccccccccCCCCcEEEEEEecCCCccchhhheeeeccCCCchhheeeeEEEEEeecCCceEEeEeEEEEecC
Q psy14046 321 EVTMDGSFYTSYRKNIVRPDEVLRAIYIPHTAETQYFKAYKQARRRDDDIAIVNAAFNVTLDIQSDGAVVKDCEFAFGGM 400 (857)
Q Consensus 321 ~vpl~e~F~~g~~~t~L~~~EiI~~I~iP~~~~~~~~~~~K~~~R~~~d~a~v~~A~~~~~~~~~~~~~i~~~ria~Ggv 400 (857)
++|+++ ||.+|+|++++|||+|.+|+||.+.+...|.+||+++|+..||+.|.+||.++++ ++ +|.++||+||||
T Consensus 341 tlPLe~-~Fi~Y~kqdr~pGEfVe~v~vP~~~~~~rfa~yKisKRrdeDISAv~~Af~l~Ld--g~--~V~~arIa~GGm 415 (493)
T COG4630 341 TLPLED-YFIAYGKQDRQPGEFVEAVRVPLPAPSERFAAYKISKRRDEDISAVCGAFALDLD--GG--RVADARIAFGGM 415 (493)
T ss_pred cccHHH-HHHHhhhhccCcchhhhheecCCCCcchhhhhhhhhhhccchHHHHHhHheeeec--CC--eeeeeeeecCcc
Confidence 999999 9999999999999999999999998888999999999999999999999999997 56 999999999999
Q ss_pred CCcceeHHHHHHHHhCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy14046 401 APTTVLAKKTTEQMINKPWNQSLLEDTWRNLMADLPLDHSAPGGMIQYRRSLTLSLFYKFYIAVSVD 467 (857)
Q Consensus 401 ~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~~i~~p~~d~~gs~~YRr~la~~ll~r~l~~~~~~ 467 (857)
+.+|.|+.++|++|.||+|++++++.|.+++..++. |.+|.|+|++||..+++++++|||++....
T Consensus 416 AaTPkRA~~~EaAL~Gk~wteatve~A~aAl~~D~t-PltD~RAsaeYR~l~a~nlL~RfflEt~~~ 481 (493)
T COG4630 416 AATPKRASEVEAALLGKPWTEATVEAAAAALAGDFT-PLTDMRASAEYRALTAKNLLRRFFLETQGE 481 (493)
T ss_pred ccCccchHHHHHHHcCCCccHHHHHHHHHHHhcCCC-cccchhhhHHHHHHHHHHHHHHHhhhccCC
Confidence 999999999999999999999999999999999999 999999999999999999999999998765
No 6
>TIGR02963 xanthine_xdhA xanthine dehydrogenase, small subunit. Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and
Probab=100.00 E-value=1.5e-93 Score=817.48 Aligned_cols=393 Identities=39% Similarity=0.666 Sum_probs=360.1
Q ss_pred CCCceEEEcCcCCCCCCCCcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHhCCCCCCHHHHHHHHhCCcccCCCChhHHH
Q psy14046 1 MHGLAVTTVEGIGSTKTKLHPVQERLAKAHGSQCGFCTPGIVMSMYALLRSLPGKPTMKDMEVALQGNLCRCTGYRPILE 80 (857)
Q Consensus 1 ~~g~~i~Tveg~~~~~~~~~~iq~~~~~~~~~qCGfCtpg~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCrCtgy~~i~~ 80 (857)
++|++|+|||||++.++.+||||++|+++||+|||||||||||++++||+++|. ||++||+++|+|||||||||++|++
T Consensus 74 ~~g~~i~TvEgl~~~~~~l~~~q~a~~~~~~~QCG~CtpG~vm~~~~ll~~~~~-~~~~~i~~~l~gnlCRCtgy~~i~~ 152 (467)
T TIGR02963 74 LDGKAVVTVEDLRQPDGRLHPVQQAMVECHGSQCGFCTPGFVMSLYALYKNSPA-PSRADIEDALQGNLCRCTGYRPILD 152 (467)
T ss_pred cCCCEEEecCCCCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHhcCCC-CCHHHHHHHhcCCcccCCCCHHHHH
Confidence 589999999999864567999999999999999999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHHHhhhhcccccCCCCCcCCCCCCCcccCCCCCccCCCCCCCchhhhccCCCCCCCCCCCCCCCCCCccccccccC
Q psy14046 81 GFKTFTEEWERDRLTNGTNGINGSVQNGNGVCAMGENCCKNKKPGDEEEKEELFSPSEFTPYDKSQEPTFPPELQLNDTY 160 (857)
Q Consensus 81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fp~~l~~~~~~ 160 (857)
|+.. +.+.. | +++|++.++++| |+|+.. .
T Consensus 153 a~~~-~~~~~---------------------~--------------------------~~~~~~~~~~~~-~~l~~~--~ 181 (467)
T TIGR02963 153 AAEA-AFDYP---------------------C--------------------------SDPLDADRAPII-ERLRAL--R 181 (467)
T ss_pred HHHH-HHhCC---------------------C--------------------------CCcCCcchhhhh-hHHHhc--C
Confidence 9944 33200 1 235667778888 456521 1
Q ss_pred CccceeeecCCcEEEccCCHHHHHHHHHhCCCCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEccc
Q psy14046 161 DKEYLQIRGPRATWYRPQTLTQLLELKAKFPEAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGA 240 (857)
Q Consensus 161 ~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~ 240 (857)
+..++.+.+...+||+|+||+||+++|+++|+++++|||||++++++++...++++|||++|+||++|+.++++|+|||+
T Consensus 182 ~~~~~~~~~~~~~~~~P~sl~Ea~~ll~~~~~a~lvAGGTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~ 261 (467)
T TIGR02963 182 AGETVELNFGGERFIAPTTLDDLAALKAAHPDARIVAGSTDVGLWVTKQMRDLPDVIYVGQVAELKRIEETDDGIEIGAA 261 (467)
T ss_pred CCcceeecCCCceEECCCCHHHHHHHHhhCCCCEEEecCcchHHHHhcCCCCCCeEEECCCChhhccEEEcCCEEEEecC
Confidence 24456677777899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccCCCCCHHHHHhhcCcEEEEEEcCCCeE
Q psy14046 241 TSLNDMRAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGSPISDMNPILMAARCRLLLESKAEGTR 320 (857)
Q Consensus 241 vTl~~l~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~asp~sDl~p~LlAldA~v~l~s~~~G~R 320 (857)
+||+++.+.++ +.+|.|++++++|||+||||+|||||||++++|+||++|+|+||||+|+|.+. +|+|
T Consensus 262 vT~~el~~~l~-----------~~~p~L~~a~~~ias~qIRN~aTiGGNI~~asP~sD~~p~LlALdA~v~l~~~-~G~R 329 (467)
T TIGR02963 262 VTLTDAYAALA-----------KRYPELGELLRRFASLQIRNAGTLGGNIANGSPIGDSPPALIALGARLTLRKG-EGRR 329 (467)
T ss_pred CcHHHHHHHHH-----------HHhHHHHHHHHHhCCHHHcCceecccccccCCCchHHHHHHHHcCCEEEEEcC-CCcE
Confidence 99999986543 57889999999999999999999999999999999999999999999999999 8999
Q ss_pred EEEcccccccccccccCCCCcEEEEEEecCCCccchhhheeeeccCCCchhheeeeEEEEEeecCCceEEeEeEEEEecC
Q psy14046 321 EVTMDGSFYTSYRKNIVRPDEVLRAIYIPHTAETQYFKAYKQARRRDDDIAIVNAAFNVTLDIQSDGAVVKDCEFAFGGM 400 (857)
Q Consensus 321 ~vpl~e~F~~g~~~t~L~~~EiI~~I~iP~~~~~~~~~~~K~~~R~~~d~a~v~~A~~~~~~~~~~~~~i~~~ria~Ggv 400 (857)
+||++| ||.||+++.|+++|||++|+||.+..+.++.+||+++|+++|||+||+|++++++ ++ +|+++||+||||
T Consensus 330 ~vpl~d-F~~g~~kt~L~~~EiI~~I~iP~~~~~~~~~~~K~~~R~~~dia~V~~A~~v~~~--~~--~i~~~ria~Ggv 404 (467)
T TIGR02963 330 TLPLED-FFIDYGKTDRQPGEFVEALHVPRPTPGERFRAYKISKRFDDDISAVCAAFNLELD--GG--VVAEIRIAFGGM 404 (467)
T ss_pred EEeHHH-hhcccccccCCCCceEEEEEecCCCCCCceEEEEecccccccceeeEEEEEEEEc--CC--eEeEEEEEEecC
Confidence 999999 9999999999999999999999776566778899999999999999999999986 56 899999999999
Q ss_pred CCcceeHHHHHHHHhCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q psy14046 401 APTTVLAKKTTEQMINKPWNQSLLEDTWRNLMADLPLDHSAPGGMIQYRRSLTLSLFYKFYIA 463 (857)
Q Consensus 401 ~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~~i~~p~~d~~gs~~YRr~la~~ll~r~l~~ 463 (857)
+++|+|+.++|++|.|++|+++++++|.+.+.+++. |.+|.++|++||++|+.+|++||+.+
T Consensus 405 a~~p~r~~~~E~~L~G~~~~~~~l~~a~~~l~~~~~-p~~d~r~sa~YR~~la~~l~~r~~~~ 466 (467)
T TIGR02963 405 AATPKRAAATEAALLGKPWNEATVEAAMAALAGDFT-PLSDMRASAEYRLLTAKNLLRRFFLE 466 (467)
T ss_pred CCCceehHHHHHHhcCCCCCHHHHHHHHHHHHhhCC-CCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999998 88999999999999999999999976
No 7
>PRK09800 putative hypoxanthine oxidase; Provisional
Probab=100.00 E-value=4.4e-81 Score=763.61 Aligned_cols=309 Identities=22% Similarity=0.294 Sum_probs=270.6
Q ss_pred CCCCCccccccccccCccceecccCcCCCCCcEEEEEEeCCCCCeEEecCCchhhhhCCCeEEEEecCCCCCC------C
Q psy14046 537 DLVGRPIVHASAFKQATGEAIYCDDIPKYQTELYLAFVVSSKPHAKILSVDPSAALAMEGVRGWVDERDVPGQ------K 610 (857)
Q Consensus 537 ~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~vvt~~Dip~~------~ 610 (857)
+.||++++|+|+..||||+++|++|+ .+|||||++++|||++||+|++||+++|++||||++|+|++|+|.. +
T Consensus 170 ~~VGk~~~R~d~~~kvtG~a~Y~~D~-~~pgmL~a~vvrSp~ahArI~sID~s~A~a~pGV~~Vvt~~Dvp~~~~~~~~~ 248 (956)
T PRK09800 170 EVIGKHYPKTDAAKMVQAKPCYVEDR-VTADACVIKMLRSPHAHALITHLDVSKAEALPGVVHVITHLNCPDIYYTPGGQ 248 (956)
T ss_pred ccCCCCCCCcChHhhCcccccccccC-CCCCCEEEEEeecCCCcEEEeeeEHHHHHhCCCeEEEEcHHHCCcccccccCc
Confidence 44899999999999999999999999 8999999999999999999999999999999999999999999831 1
Q ss_pred CCCCccccccccccCCeEeecCCeEEEEEECCHHHHHHHhccceeEEeeCCCCCCHHHHHhcCCC--CCCC---------
Q psy14046 611 NYVGGIIHDDVIFARDVVTCVGQPIGGVIAEDQLIAQRAAALVKVTYEELPAIFSIQEAIEHKSF--FNLE--------- 679 (857)
Q Consensus 611 ~~~g~~~~d~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~v~V~ye~lp~v~~~~~Al~~~~~--~~~~--------- 679 (857)
..+....++++|++++|+|+||||++|||+|+|+|++|+++|+|+||+||+++|+++|+++++. |++.
T Consensus 249 -~~~~~~~~~~~l~~~~Vry~G~~vaaVvAet~~~A~~A~~~V~Veye~Lp~v~d~~~Al~~~a~~vh~~~~~~~~~~~~ 327 (956)
T PRK09800 249 -SAPEPSPLDRRMFGKKMRHVGDRVAAVVAESEEIALEALKLIDVEYEVLKPVMSIDEAMAEDAPVVHDEPVVYVAGAPD 327 (956)
T ss_pred -CCCCCCCCCccccCCeEEEcCCeEEEEEECCHHHHHHHhcCCceEEEeCCccCCHHHHhcCCCceeccccccccccccc
Confidence 1121112334456999999999999999999999999999999999999999999999998873 4310
Q ss_pred --------------------------------CccccCCChhhhhhcCceeEEEEEEeCcccCCCCCCCceEEEEecCCC
Q psy14046 680 --------------------------------PSVYGRGNVDEEFLKVDHILEGEVSVGGQEHFYLETNVSVAVPKLEDG 727 (857)
Q Consensus 680 --------------------------------~~~~~~Gd~~~a~~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~~ 727 (857)
......||++++|++|++|||++|++++|+|+||||++|+|+|+ +|
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~af~~a~~vve~~y~~~~~~H~~mEp~~aiA~~d--~~ 405 (956)
T PRK09800 328 TLEDDNSHAAQRGEHMIINFPIGSRPRKNIAASIHGHIGDMDKGFADADVIIERTYNSTQAQQCPTETHICFTRMD--GD 405 (956)
T ss_pred ccccccccccccccccccccccccCCCCceeeeccccCCCHHHHHhhCCEEEEEEEEeCCcccccCCCceEEEEEe--CC
Confidence 12246799999999999999999999999999999999999995 56
Q ss_pred eEEEEeCCCChHHHHHHHHHHhCCCCCCEEEEecccCCCCCCCCCCCccc------------------------------
Q psy14046 728 CMEIFVSSQHPSEIQEMTAHALGVPSNRIVAKTKRLGGGFGGKEKLQSEL------------------------------ 777 (857)
Q Consensus 728 ~l~v~~stQ~p~~~~~~vA~~Lglp~~~V~V~~~~~GGgFGgK~~~~~~~------------------------------ 777 (857)
+|+||+|||+|+.+|..||++||||++||+|+.+++|||||+|.+.....
T Consensus 406 ~l~v~~stQ~p~~~r~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~~e~~aA~aA~~~grPVkl~~tReE~~~~~~~R~ 485 (956)
T PRK09800 406 RLVIHASTQVPWHLRRQVARLVGMKQHKVHVIKERVGGGFGSKQDILLEEVCAWATCVTGRPVLFRYTREEEFIANTSRH 485 (956)
T ss_pred eeEEEECCCcHHHHHHHHHHHHCCCHHHeEEEcCCCCccCcCcccccHHHHHHHHHHHhCCCEEEEeeHHHHhhCcCCCC
Confidence 99999999999999999999999999999999999999999998654321
Q ss_pred -----c-------CeEE-----------------------------------E-----------------Ee-----hhH
Q psy14046 778 -----Y-------GLFT-----------------------------------E-----------------VR-----EDD 788 (857)
Q Consensus 778 -----y-------G~i~-----------------------------------~-----------------~r-----q~~ 788 (857)
| |+|+ | +| |+.
T Consensus 486 ~~~~~~k~g~d~dG~I~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~ 565 (956)
T PRK09800 486 VAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGPALSLPLYPCDNVDFQVTTYYSNICPNGAYQGYGAPKGN 565 (956)
T ss_pred ceEEEEEEEECCCCCEEEEEEEEEEcCCcCCCcchHHHHHHHhhcCcCcccceEEEEEEEEECCCCCCCCcCCCCcchHH
Confidence 0 6666 1 22 999
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHhcCCcCCCcccc-----------ccc-cCCCcHHHHHHHHHHhCCChhHH
Q psy14046 789 WIAETMGHHVAQFLKLDYADFARSNLFVTGNLTHY-----------NQV-LEHCTLGRCFEQVHESGKYKERR 849 (857)
Q Consensus 789 ~a~E~~id~iA~~lg~DP~e~R~~Nl~~~g~~~~~-----------g~~-~~~~~~~~~l~~~~~~~~~~~r~ 849 (857)
|++|++||++|++|||||+|||++|++++|+.+++ +.+ ++++.+.+||+++++.++|.+|+
T Consensus 566 fa~Es~mDelA~~lg~DPve~R~rN~~~~gd~~~~~~~~~~g~~~~~~~~~~s~~~~~~L~~~~e~~~w~~~~ 638 (956)
T PRK09800 566 FAITMALAELAEQLQIDQLEIIERNRVHEGQELKILGAIGEGKAPTSVPSAASCALEEILRQGREMIQWSSPK 638 (956)
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHhCCCCCcccccccccccccccccCccccCCCHHHHHHHHHHhcCcchhh
Confidence 99999999999999999999999999999987643 333 56888999999999999998764
No 8
>TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1. Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme.
Probab=100.00 E-value=6.8e-81 Score=758.56 Aligned_cols=303 Identities=27% Similarity=0.414 Sum_probs=272.7
Q ss_pred CCCccccccccccCccceecccCcCCCCCcEEEEEEeCCCCCeEEecCCchhhhhCCCeEEEEecCCCCCCCCCCCcccc
Q psy14046 539 VGRPIVHASAFKQATGEAIYCDDIPKYQTELYLAFVVSSKPHAKILSVDPSAALAMEGVRGWVDERDVPGQKNYVGGIIH 618 (857)
Q Consensus 539 iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~vvt~~Dip~~~~~~g~~~~ 618 (857)
||++++|+|+..||||+++|++|+ .+|||||++++|||++||+|++||+|+|++||||++|+|++|+|+.+ ..|....
T Consensus 162 iG~~~~R~d~~~kvtG~~~Y~~Di-~~pgmL~a~~vrSp~ahA~I~~ID~s~A~a~PGV~aVvt~~Dip~~~-~~g~~~~ 239 (848)
T TIGR03311 162 LGENFPRVDAVPKVLGEGVYVDDM-QIEGMLYGSALRSKYPRALVKSIDITVALKHPGVVAVLTAKDIPGNR-KIGHIFK 239 (848)
T ss_pred CCCccCCcChhhhCcccccccccC-CCCCCEEEEEEeCCCCCEEEEeeEHHHHHhCCCcEEEEeHHHCCCcc-CCCCCCC
Confidence 799999999999999999999999 89999999999999999999999999999999999999999999754 4454445
Q ss_pred ccc-ccc-CCeEeecCCeEEEEEECCHHHHHHHhccceeEEeeCCCCCCHHHHHhcCC--CCCCC----CccccCCChhh
Q psy14046 619 DDV-IFA-RDVVTCVGQPIGGVIAEDQLIAQRAAALVKVTYEELPAIFSIQEAIEHKS--FFNLE----PSVYGRGNVDE 690 (857)
Q Consensus 619 d~~-~~a-~~~V~y~GqpVa~VvAet~~~A~~Aa~~v~V~ye~lp~v~~~~~Al~~~~--~~~~~----~~~~~~Gd~~~ 690 (857)
+++ +|+ +++|+|+|||||+|+|+|+++|++|+++|+|+|+++|++.|+++|+++++ +|+.. ...+..||+++
T Consensus 240 ~~~~~~a~~~~Vry~Ge~VA~VvA~t~~~A~~A~~~V~Veye~lp~v~d~~~A~~~~a~~i~~~~Nv~~~~~~~~Gdv~~ 319 (848)
T TIGR03311 240 DWPALIAVGEITRYVGDAVALVAAKSKEALREALNLIKVDYEELPPLTSPEEALAEGAPAIHPKGNILSEEHVVRGDAEE 319 (848)
T ss_pred CccccccCCCEEEEcCCeEEEEEECCHHHHHHHhCCCcEEEecCCCcCCHHHHhcCCCCeECCCCCCcceeeecCCCHHH
Confidence 555 344 58999999999999999999999999999999999999999999999887 45421 23457899999
Q ss_pred hhhcCceeEEEEEEeCcccCCCCCCCceEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCCEEEEecccCCCCCCC
Q psy14046 691 EFLKVDHILEGEVSVGGQEHFYLETNVSVAVPKLEDGCMEIFVSSQHPSEIQEMTAHALGVPSNRIVAKTKRLGGGFGGK 770 (857)
Q Consensus 691 a~~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~~~l~v~~stQ~p~~~~~~vA~~Lglp~~~V~V~~~~~GGgFGgK 770 (857)
+|++|+++||++|++++|+|+||||++|+|+|+ +|+|+||+|||+|+.+|..+|++||||+++|+|+++++|||||+|
T Consensus 320 af~~A~~vve~~y~~~~~~h~~mEp~~~vA~~~--~~~l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~~vGGgFG~K 397 (848)
T TIGR03311 320 ALENSAYVVTNHYSTPFTEHAFLEPESALAVPE--GDGVIIYTSTQGVYDEQRELASLLGLPKEKIRVINKFVGGGFGGK 397 (848)
T ss_pred HhhcCCeEEEEEEEECCEeeeecCCceEEEEEe--CCeEEEEECCcCHHHHHHHHHHHhCCChHHEEEEeCCCCCcCCcc
Confidence 999999999999999999999999999999995 677999999999999999999999999999999999999999999
Q ss_pred CCCCccc-----------------------------------c-------CeEE--------------------------
Q psy14046 771 EKLQSEL-----------------------------------Y-------GLFT-------------------------- 782 (857)
Q Consensus 771 ~~~~~~~-----------------------------------y-------G~i~-------------------------- 782 (857)
....... | |+|+
T Consensus 398 ~~~~~~~~aA~~A~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~~v~~~~~~ 477 (848)
T TIGR03311 398 EDMSVQHHAALLAWATKRPVKVTLTRKESILVHPKRHAMEMTFTTGCDEAGNLTAMKADIIADTGAYASLGGPVLQRACT 477 (848)
T ss_pred ccccHHHHHHHHHHHhCCCEEEEechHHhhhccCCCCceEEEEEEEECCCCcEEEEEEEEEEccccCCCccHHHHHHHHH
Confidence 9876422 0 6766
Q ss_pred ---------E-----------------Ee-----hhHHHHHHHHHHHHHHcCCCHHHHHHhcCCcCCCccccccccC-CC
Q psy14046 783 ---------E-----------------VR-----EDDWIAETMGHHVAQFLKLDYADFARSNLFVTGNLTHYNQVLE-HC 830 (857)
Q Consensus 783 ---------~-----------------~r-----q~~~a~E~~id~iA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~-~~ 830 (857)
| +| |++|++|++||++|++|||||+|||++|++++|+.+++|+.++ +.
T Consensus 478 ~~~~~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~lg~DP~E~R~rN~~~~gd~~~~g~~~~~~~ 557 (848)
T TIGR03311 478 HAAGPYKYPNVDIRGTAVYTNNPPAGAFRGFGVTQSNFAMECNLNLLAEKVGLSPWEIRFKNAVEPGDTLPNGQVVSEGT 557 (848)
T ss_pred hcCCCccCceEEEEEEEEECCCCCCCCccCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCcCCCCceeCCCc
Confidence 2 22 9999999999999999999999999999999999999999997 55
Q ss_pred cHHHHHHHHHHhCCChh
Q psy14046 831 TLGRCFEQVHESGKYKE 847 (857)
Q Consensus 831 ~~~~~l~~~~~~~~~~~ 847 (857)
.+++||+++++. |++
T Consensus 558 ~~~~~l~~~~~~--~~~ 572 (848)
T TIGR03311 558 AIKETLLAVKEV--YEK 572 (848)
T ss_pred hHHHHHHHHHHH--hhh
Confidence 699999999985 653
No 9
>TIGR03313 Se_sel_red_Mo probable selenate reductase, molybdenum-binding subunit. Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity.
Probab=100.00 E-value=2.5e-80 Score=757.93 Aligned_cols=310 Identities=21% Similarity=0.288 Sum_probs=271.2
Q ss_pred CCCCCccccccccccCccceecccCcCCCCCcEEEEEEeCCCCCeEEecCCchhhhhCCCeEEEEecCCCCCCC-----C
Q psy14046 537 DLVGRPIVHASAFKQATGEAIYCDDIPKYQTELYLAFVVSSKPHAKILSVDPSAALAMEGVRGWVDERDVPGQK-----N 611 (857)
Q Consensus 537 ~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~vvt~~Dip~~~-----~ 611 (857)
..||++++|+|+..||||+++|++|+ .+|||||++++|||++||+|+|||+++|++||||++|+|++|+|..+ +
T Consensus 166 ~~iGk~~~R~d~~~kvtG~a~Y~~D~-~~pgmL~a~v~rSP~ahArI~sID~s~A~a~pGV~~Vvt~~D~p~~~~~~~~~ 244 (951)
T TIGR03313 166 TIIGKNCPKIDAAKMVQAKPCYVEDR-VPADACVIKMLRSPHPHAWITHLDVSKAEALPGVVHVITHLNCPDIYYTPGGQ 244 (951)
T ss_pred ccCCCCCcCcChHhhCccCccccccC-CCCCCEEEEEEecCCCcEEEEeeEHHHHHhCCCeEEEEeHHHCCccccCCCCc
Confidence 45899999999999999999999999 89999999999999999999999999999999999999999998311 0
Q ss_pred CCCccccccccccCCeEeecCCeEEEEEECCHHHHHHHhccceeEEeeCCCCCCHHHHHhcCCC--CCCC----------
Q psy14046 612 YVGGIIHDDVIFARDVVTCVGQPIGGVIAEDQLIAQRAAALVKVTYEELPAIFSIQEAIEHKSF--FNLE---------- 679 (857)
Q Consensus 612 ~~g~~~~d~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~v~V~ye~lp~v~~~~~Al~~~~~--~~~~---------- 679 (857)
..+....++++|++++|+|+||||++|||+|+|+|++|+++|+|+||+||+++|+++|+++++. |+..
T Consensus 245 ~~~~~~~~~~~l~~~~Vry~G~~vaaVvAet~~~A~~A~~~I~Veye~Lp~v~d~~~Al~~~ap~ih~~~~~~~~~~~~~ 324 (951)
T TIGR03313 245 SAPEPSPLDRRMFGQKMRHVGDRVAAVVAESEEIALHALKLIEVEYDVLTPVMSIDEAMAAEAPIVHDEPIVYGAGAPDD 324 (951)
T ss_pred cCCCCCCCcccccCCeEEEcCCEEEEEEECCHHHHHHHhcCCeeEEEeCCccCCHHHHhcCCCCeecccccccccccccc
Confidence 1111112344568999999999999999999999999999999999999999999999998873 4320
Q ss_pred -------------------------------CccccCCChhhhhhcCceeEEEEEEeCcccCCCCCCCceEEEEecCCCe
Q psy14046 680 -------------------------------PSVYGRGNVDEEFLKVDHILEGEVSVGGQEHFYLETNVSVAVPKLEDGC 728 (857)
Q Consensus 680 -------------------------------~~~~~~Gd~~~a~~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~~~ 728 (857)
......||++++|++++++||++|++++|+|+||||++|+|+|+ +|+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~af~~A~~vve~~y~~~~~~H~~mEp~~aiA~~d--~~~ 402 (951)
T TIGR03313 325 LEEQNANADPRGEHMIINFPIGSRPRKNIAASVHGHIGDLNKGFAEADVIIERTYESTQAQQCPTETHICFTYMD--GER 402 (951)
T ss_pred ccccccccccccccccccccccccCCCceeeeccccCCCHHHHHhcCCEEEEEEEEECCEeeecCCCceEEEEEc--CCe
Confidence 11246799999999999999999999999999999999999995 568
Q ss_pred EEEEeCCCChHHHHHHHHHHhCCCCCCEEEEecccCCCCCCCCCCCccc-------------------------------
Q psy14046 729 MEIFVSSQHPSEIQEMTAHALGVPSNRIVAKTKRLGGGFGGKEKLQSEL------------------------------- 777 (857)
Q Consensus 729 l~v~~stQ~p~~~~~~vA~~Lglp~~~V~V~~~~~GGgFGgK~~~~~~~------------------------------- 777 (857)
|+||+|||+|+.+|..||++||||.+||+|+++++|||||+|.+.....
T Consensus 403 l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~e~~aA~aA~~~GrPVkl~~tReE~~~~~~~R~~ 482 (951)
T TIGR03313 403 LVIHASTQVPWHVRRQVARIVGMKQHKVHVIKERVGGGFGSKQDILLEEVCAWATWVTGRPVYFRYTREEEFICNTSRHV 482 (951)
T ss_pred EEEEECCcCHHHHHHHHHHHHCCCHHHeEEEcCCCCcCcCCcccccHHHHHHHHHHHhCCCEEEEeeHHHHhhccCCCCC
Confidence 9999999999999999999999999999999999999999998654321
Q ss_pred ----c-------CeEE-----------------------------------E-----------------Ee-----hhHH
Q psy14046 778 ----Y-------GLFT-----------------------------------E-----------------VR-----EDDW 789 (857)
Q Consensus 778 ----y-------G~i~-----------------------------------~-----------------~r-----q~~~ 789 (857)
| |+|+ | +| |+.|
T Consensus 483 ~~~~~k~g~d~dG~I~A~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~p~ga~Rg~G~~q~~f 562 (951)
T TIGR03313 483 AKVTVKLGAKKDGKLTAIDMDFRANTGPYGNHSLTVPSNGPALSLPLYPCDNVDFRVTTYYSNICPTGAYQGYGAPKGNF 562 (951)
T ss_pred eEEEEEEEECCCCcEEEEEEEEEEcCccCcccchHHhhhhhhhcCcCccCCeEEEEEEEEECCCCCCCCcCCCCcccHHH
Confidence 0 6666 1 22 9999
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHhcCCcCCCccc-----------cccc-cCCCcHHHHHHHHHHhCCChhHH
Q psy14046 790 IAETMGHHVAQFLKLDYADFARSNLFVTGNLTH-----------YNQV-LEHCTLGRCFEQVHESGKYKERR 849 (857)
Q Consensus 790 a~E~~id~iA~~lg~DP~e~R~~Nl~~~g~~~~-----------~g~~-~~~~~~~~~l~~~~~~~~~~~r~ 849 (857)
++|++||++|++|||||+|||++|++++||.++ ++.+ ++++++.+||++++++++|++|+
T Consensus 563 a~Es~mDelA~~lG~DP~e~R~rN~~~~gd~~~~~~~~~~g~~~~~~~~~~s~~~~~~l~~~~~~~~w~~~~ 634 (951)
T TIGR03313 563 ALTMAMAELAEELGIDQLEMIETNRVHEGQELKILGAIGEGKMPTSVPKAASCALEEILRQGRELIEWDSPK 634 (951)
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHhCCCCCcccccccccccccccccccccCCCcHHHHHHHHHHhcCccchh
Confidence 999999999999999999999999999998763 3333 56788999999999999998765
No 10
>TIGR02965 xanthine_xdhB xanthine dehydrogenase, molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase.
Probab=100.00 E-value=2.9e-66 Score=627.00 Aligned_cols=315 Identities=40% Similarity=0.632 Sum_probs=288.9
Q ss_pred CCCccccccccccCccceecccCcCCCCCcEEEEEEeCCCCCeEEecCCchhhhhCCCeEEEEecCCCCCCCCCCCcccc
Q psy14046 539 VGRPIVHASAFKQATGEAIYCDDIPKYQTELYLAFVVSSKPHAKILSVDPSAALAMEGVRGWVDERDVPGQKNYVGGIIH 618 (857)
Q Consensus 539 iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~vvt~~Dip~~~~~~g~~~~ 618 (857)
+|++++|+|+..||||+++|++|+..+|||||++++|||++||+|++||+++|++||||++|+|++|+|+.| ..+....
T Consensus 1 ~G~~~~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~aha~I~~iD~s~A~~~pGV~~V~t~~D~p~~~-~~g~~~~ 79 (758)
T TIGR02965 1 VGTSLKHESAHKHVAGTAVYIDDIPEPAGTLHAALGLSTRAHARITSMDLSAVRAAPGVVDVLTAADIPGEN-DISPIIH 79 (758)
T ss_pred CCCCccCcchHhhCceeeEcccCCCCCCCCEEEEEEecCCCceEEeecchHHHhcCCCcEEEEEHHHCCCCC-CCCCCCC
Confidence 699999999999999999999999437999999999999999999999999999999999999999999766 5565567
Q ss_pred ccccccCCeEeecCCeEEEEEECCHHHHHHHhccceeEEeeCCCCCCHHHHHhcCCC--CCCCCccccCCChhhhhhcCc
Q psy14046 619 DDVIFARDVVTCVGQPIGGVIAEDQLIAQRAAALVKVTYEELPAIFSIQEAIEHKSF--FNLEPSVYGRGNVDEEFLKVD 696 (857)
Q Consensus 619 d~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~v~V~ye~lp~v~~~~~Al~~~~~--~~~~~~~~~~Gd~~~a~~~a~ 696 (857)
++|+|+.++|+|+||||++|||+|+++|++|+++|+|+||++|+++|+++|+++++. ++ ...+..||++++|++|+
T Consensus 80 ~~~~la~~~Vry~Ge~va~VvA~~~~~A~~A~~~i~V~ye~lp~v~d~~~Al~~~a~~~~~--~~~~~~Gd~~~af~~a~ 157 (758)
T TIGR02965 80 DDPLLADGKVEFVGQPIFAVIATSRDAARRAARLAKIEYEELPAVLDIEEALAAGSRFVTP--PLTLERGDAEAALAAAP 157 (758)
T ss_pred CceeccCCEEEEcCCeEEEEEECCHHHHHHHhhccEEEEEcCCccCCHHHHhcCCCCcccC--cccccCCCHHHHHhhCC
Confidence 999999999999999999999999999999999999999999999999999998863 33 33558899999999999
Q ss_pred eeEEEEEEeCcccCCCCCCCceEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCCEEEEecccCCCCCCCCCCCcc
Q psy14046 697 HILEGEVSVGGQEHFYLETNVSVAVPKLEDGCMEIFVSSQHPSEIQEMTAHALGVPSNRIVAKTKRLGGGFGGKEKLQSE 776 (857)
Q Consensus 697 ~vve~~~~~~~~~H~~mEp~~~~a~~~~~~~~l~v~~stQ~p~~~~~~vA~~Lglp~~~V~V~~~~~GGgFGgK~~~~~~ 776 (857)
++||++|++++|+|+||||++|+|+|+ ++|+|+||+|||+|+.+|..+|++||||+++|+|+++++|||||+|.+....
T Consensus 158 ~vve~~y~~~~~~h~~mEp~~~vA~~~-~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~~~~~~ 236 (758)
T TIGR02965 158 HRLSGEMRIGGQEHFYLEGQIALAVPG-EDGGMHVWSSTQHPSEVQHLVAHVLGVPSHAVTVEVRRMGGGFGGKETQANL 236 (758)
T ss_pred EEEEEEEEECCEeEEecCCceEEEEEc-CCCCEEEEECCCChHHHHHHHHHHhCCChHHEEEEeCCCccCccccccccch
Confidence 999999999999999999999999995 5688999999999999999999999999999999999999999999986431
Q ss_pred --c-----------------------------------c-------CeEE------------------------------
Q psy14046 777 --L-----------------------------------Y-------GLFT------------------------------ 782 (857)
Q Consensus 777 --~-----------------------------------y-------G~i~------------------------------ 782 (857)
. | |+|+
T Consensus 237 ~~~~aa~~A~~~grPVk~~~sR~E~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~~ 316 (758)
T TIGR02965 237 FACLAAVAARKTGRPVKLRPDRDDDMMITGKRHDFLVDYDVGFDDEGRILGVDIDMAARCGFSADLSGPVTDRALFHADN 316 (758)
T ss_pred HHHHHHHHHHHHCCCEEEEechHHhhhhccCccceEEEEEEEECCCCCEEEEEEEEeecCcccCCcchHHHHHHHHhcCC
Confidence 1 0 6666
Q ss_pred -----E-----------------Ee-----hhHHHHHHHHHHHHHHcCCCHHHHHHhcCCcCCCcc--ccccccCCCcHH
Q psy14046 783 -----E-----------------VR-----EDDWIAETMGHHVAQFLKLDYADFARSNLFVTGNLT--HYNQVLEHCTLG 833 (857)
Q Consensus 783 -----~-----------------~r-----q~~~a~E~~id~iA~~lg~DP~e~R~~Nl~~~g~~~--~~g~~~~~~~~~ 833 (857)
| +| |+.|++|++||++|++|||||+|||++|++++|+.+ ++|+.++++.++
T Consensus 317 ~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~~A~~lg~DP~e~R~~Nl~~~g~~~~~~~g~~~~s~~~~ 396 (758)
T TIGR02965 317 AYFLPDVTITSHPLKTNTQSNTAFRGFGGPQGMVAIERIMDEVARALGKDPLEVRKRNFYGKDERNVTPYHQTVEDNIIH 396 (758)
T ss_pred cccCCceEEEEEEEEcCCCCCccccCCChHHHHHHHHHHHHHHHHHhCcCHHHHHHHcCCCCCCCCcCCCceeccCCcHH
Confidence 1 23 999999999999999999999999999999988776 679999999999
Q ss_pred HHHHHHHHhCCChhHHHHHHhhcC
Q psy14046 834 RCFEQVHESGKYKERRKQCEEFNR 857 (857)
Q Consensus 834 ~~l~~~~~~~~~~~r~~~~~~fN~ 857 (857)
+||+++++.++|++|+++.++||+
T Consensus 397 ~~l~~~~~~~~~~~~~~~~~~~~~ 420 (758)
T TIGR02965 397 EIIEELEESSDYAARRAAIRAFNA 420 (758)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHh
Confidence 999999999999999988887764
No 11
>COG4631 XdhB Xanthine dehydrogenase, molybdopterin-binding subunit B [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.2e-66 Score=565.45 Aligned_cols=319 Identities=38% Similarity=0.601 Sum_probs=302.3
Q ss_pred cCCCCCccccccccccCccceecccCcCCCCCcEEEEEEeCCCCCeEEecCCchhhhhCCCeEEEEecCCCCCCCCCCCc
Q psy14046 536 SDLVGRPIVHASAFKQATGEAIYCDDIPKYQTELYLAFVVSSKPHAKILSVDPSAALAMEGVRGWVDERDVPGQKNYVGG 615 (857)
Q Consensus 536 ~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~vvt~~Dip~~~~~~g~ 615 (857)
...+|.+.+|-++..+|+|+|.|+||||.++|.||+++-.|+++||+|+++|++++++.|||+.|+|++|+||.| ..+|
T Consensus 16 ~~~v~~~~~HeSAhkHV~GtA~YiDD~pepag~LH~~~gls~~aHAri~~mDl~~v~a~PGVv~vlta~DvPGen-Disp 94 (781)
T COG4631 16 RGGVGTSLRHESAHKHVTGTAVYIDDIPEPAGTLHGALGLSERAHARITRMDLSAVRAAPGVVDVLTAADVPGEN-DISP 94 (781)
T ss_pred CCcccccccccchhhcccceeEEecCCCCcccchhhhccccccchheeeecchHHhhcCCCeEEEEEecCCCCCC-CCCc
Confidence 356999999999999999999999999999999999999999999999999999999999999999999999999 8888
Q ss_pred cccccccccCCeEeecCCeEEEEEECCHHHHHHHhccceeEEeeCCCCCCHHHHHhcCCCCCCCCccccCCChhhhhhcC
Q psy14046 616 IIHDDVIFARDVVTCVGQPIGGVIAEDQLIAQRAAALVKVTYEELPAIFSIQEAIEHKSFFNLEPSVYGRGNVDEEFLKV 695 (857)
Q Consensus 616 ~~~d~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~v~V~ye~lp~v~~~~~Al~~~~~~~~~~~~~~~Gd~~~a~~~a 695 (857)
..+|+|+|++++|.|+||||.+|+|+|.++|++|+++.+|+|++||+++|+++|++.+.+..+ +.++++||.+.+|+.|
T Consensus 95 ~~hddpl~a~gkVef~GQ~vfaV~A~s~e~ARraA~~a~ieYe~lp~~~di~~a~a~~~~v~~-p~~l~rGD~~a~~~~A 173 (781)
T COG4631 95 VKHDDPLLADGKVEFHGQPVFAVIAESREAARRAARLAKIEYEDLPPVTDIDEAIAAGRLVTP-PLTLKRGDAAAALAAA 173 (781)
T ss_pred ccCCCccccCceEEEccceEEEEeehhHHHHHHHHHhhhcccccCCccCCHHHHhhcccccCC-chhhcccchhhhhhhC
Confidence 899999999999999999999999999999999999999999999999999999999876544 6788999999999999
Q ss_pred ceeEEEEEEeCcccCCCCCCCceEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCCEEEEecccCCCCCCCCCCCc
Q psy14046 696 DHILEGEVSVGGQEHFYLETNVSVAVPKLEDGCMEIFVSSQHPSEIQEMTAHALGVPSNRIVAKTKRLGGGFGGKEKLQS 775 (857)
Q Consensus 696 ~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~~~l~v~~stQ~p~~~~~~vA~~Lglp~~~V~V~~~~~GGgFGgK~~~~~ 775 (857)
.+.++|++++++|+|||||.|.++|+| +|||.++||+|||.|..+|..||++||+|.|.|.|.++|||||||||++...
T Consensus 174 p~r~~G~~~iGGQehFYLEgqia~a~p-~Ed~~v~v~~STQhPtE~Q~~vahvLGvpsn~VtV~~rRMGGGFGGKEtQ~~ 252 (781)
T COG4631 174 PHRLQGEMRIGGQEHFYLEGQIALAVP-GEDGDVTVWSSTQHPTEVQHLVAHVLGVPSNAVTVEVRRMGGGFGGKETQAN 252 (781)
T ss_pred chhheeeEEEcCeeeEEEeeeeeEecc-CCCCCEEEEecCCCcHHHHHHHHHHhCCCcceEEEEEEeecCCcCcccccch
Confidence 999999999999999999999999999 5999999999999999999999999999999999999999999999998764
Q ss_pred cc-------------------------------------c-------CeEE-----------------------------
Q psy14046 776 EL-------------------------------------Y-------GLFT----------------------------- 782 (857)
Q Consensus 776 ~~-------------------------------------y-------G~i~----------------------------- 782 (857)
.. | |||+
T Consensus 253 ~fAa~aA~aA~k~~r~vk~RpdRdeDm~~TGKRHdF~v~y~vGfDdeGri~~v~~~~aarcGfS~DLSgpV~dRAlfH~D 332 (781)
T COG4631 253 QFAALAALAAKKTGRPVKIRPDRDEDMTATGKRHDFHVDYEVGFDDEGRILGVDATLAARCGFSADLSGPVTDRALFHAD 332 (781)
T ss_pred HHHHHHHHHHHHhCCceeecCCcchhhhhccCcCceEEEeeeccCCCCcEEEeeeehhhccCcccccCccchhhheeccc
Confidence 32 2 7777
Q ss_pred -----------------------EEe-----hhHHHHHHHHHHHHHHcCCCHHHHHHhcCCcCCC--ccccccccCCCcH
Q psy14046 783 -----------------------EVR-----EDDWIAETMGHHVAQFLKLDYADFARSNLFVTGN--LTHYNQVLEHCTL 832 (857)
Q Consensus 783 -----------------------~~r-----q~~~a~E~~id~iA~~lg~DP~e~R~~Nl~~~g~--~~~~g~~~~~~~~ 832 (857)
.+| |+|+++|.+||++|..||+||+|+|++|+|.++. .|||+|.++++.+
T Consensus 333 NaYf~p~v~~~s~~~kTntvSnTAfRGFGGPQGm~~~Eriid~vA~alGkdpleiRk~NfYg~~~~n~TpYhQ~Vednii 412 (781)
T COG4631 333 NAYFYPHVHILSRPLKTNTVSNTAFRGFGGPQGMLGIERIIDEVAYALGKDPLEIRKLNFYGKDGRNVTPYHQTVEDNII 412 (781)
T ss_pred cceeccceeeecceeeccccccccccccCCcchhhHHHHHHHHHHHHhCCCHHHHHhhhccCCCCCccCccccchHHhHH
Confidence 133 9999999999999999999999999999998655 7999999999999
Q ss_pred HHHHHHHHHhCCChhHHHHHHhhcC
Q psy14046 833 GRCFEQVHESGKYKERRKQCEEFNR 857 (857)
Q Consensus 833 ~~~l~~~~~~~~~~~r~~~~~~fN~ 857 (857)
.++|+++.++++|.+|++++.+||+
T Consensus 413 ~ri~~ELeaSsdyaaRr~~i~aFNa 437 (781)
T COG4631 413 ARIVDELEASSDYAARREAIRAFNA 437 (781)
T ss_pred HHHHHHHHhcchHHHHHHHHHHhhc
Confidence 9999999999999999999999996
No 12
>TIGR03196 pucD xanthine dehydrogenase D subunit. This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin.
Probab=100.00 E-value=4.9e-65 Score=615.67 Aligned_cols=306 Identities=28% Similarity=0.436 Sum_probs=280.7
Q ss_pred CCCCccc-cccccccCccceecccCcCCCCCcEEEEEEeCCCCCeEEecCCchhhhhCCCeEEEEecCCCCCCCCCCCcc
Q psy14046 538 LVGRPIV-HASAFKQATGEAIYCDDIPKYQTELYLAFVVSSKPHAKILSVDPSAALAMEGVRGWVDERDVPGQKNYVGGI 616 (857)
Q Consensus 538 ~iG~~~~-r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~vvt~~Dip~~~~~~g~~ 616 (857)
.||++++ |+|+..||||+++|++|+ .+|||||++++|||++||+|++||+++|++||||++|+|++|+|+.+ ..|..
T Consensus 2 ~iG~~~~~R~d~~~kvtG~a~Y~~Di-~~pgmL~a~~vrSp~aha~I~siD~s~A~a~pGV~~V~t~~D~p~~~-~~g~~ 79 (768)
T TIGR03196 2 GIGKPSRVRPDGPDKVTGEFKYMGDL-RFPGMLHAKTLRSAHAHAEIRRVCTDAAEKLEGVQAMVTAADVPGLA-RFGII 79 (768)
T ss_pred cCCCcCCcCcchHhhCcccccccccC-CCCCcEEEEEEecCCCcEEEeeccHHHHHhCCCcEEEEehHHCCCCC-CCCcc
Confidence 4899999 999999999999999999 89999999999999999999999999999999999999999999655 45555
Q ss_pred ccccccccCCeEeecCCeEEEEEECCHHHHHHHhccceeEEeeCCCCCCHHHHHhcCC--CCCCC----CccccCCChhh
Q psy14046 617 IHDDVIFARDVVTCVGQPIGGVIAEDQLIAQRAAALVKVTYEELPAIFSIQEAIEHKS--FFNLE----PSVYGRGNVDE 690 (857)
Q Consensus 617 ~~d~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~v~V~ye~lp~v~~~~~Al~~~~--~~~~~----~~~~~~Gd~~~ 690 (857)
..|+|+|++++|+|+|||||+|||+|+|+|++|+++|+|+||++|+++|+++|+++++ +|+.. ......||+++
T Consensus 80 ~~~~~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Veye~lp~v~d~~~a~~~~a~~i~~~~ni~~~~~~~~Gd~~~ 159 (768)
T TIGR03196 80 IADQPVFAADEIRYAGDAIAAVAAEDEEIAEAALAAIEVDYEELAPMDDPDKALQPDAEPLHEAGNILHEAEFRHGDPDE 159 (768)
T ss_pred CCCcccccCCEEEEcCCeEEEEEECCHHHHHHHhccCceEEEeCCCcCCHHHHhcCCCCeECCCCcCcceeeeccCCHhH
Confidence 6799999999999999999999999999999999999999999999999999998765 35321 22457899999
Q ss_pred hhhcCceeEEEEEEeCcccCCCCCCCceEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCCEEEEecccCCCCCCC
Q psy14046 691 EFLKVDHILEGEVSVGGQEHFYLETNVSVAVPKLEDGCMEIFVSSQHPSEIQEMTAHALGVPSNRIVAKTKRLGGGFGGK 770 (857)
Q Consensus 691 a~~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~~~l~v~~stQ~p~~~~~~vA~~Lglp~~~V~V~~~~~GGgFGgK 770 (857)
+|++|+++||++|++++|+|+||||++|+|+|+ ++|+|+||+|||+|+.+|..+|++||||++||+|+++++|||||+|
T Consensus 160 af~~a~~vve~~y~~~~~~h~~mEp~~~~A~~~-~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K 238 (768)
T TIGR03196 160 GFAAGDTVFEDQYELGMQDHAFLAPEAALAMPA-ADGGFDLRAATQHGHKDREQIAACFDIPEEKIRITLAGMGGAFGGK 238 (768)
T ss_pred HhccCCEEEEEEEEeCCeeeeecCCceEEEEEc-CCCCEEEEECCCchHHHHHHHHHHhCCCHHHEEEEeCCCCCccCCc
Confidence 999999999999999999999999999999995 5789999999999999999999999999999999999999999999
Q ss_pred CCCCccc-----------------------------------c-------CeEE--------------------------
Q psy14046 771 EKLQSEL-----------------------------------Y-------GLFT-------------------------- 782 (857)
Q Consensus 771 ~~~~~~~-----------------------------------y-------G~i~-------------------------- 782 (857)
......+ | |+|+
T Consensus 239 ~~~~~~~~aa~~A~~~gRPVk~~~sReE~~~~~~~r~~~~~~~k~g~~~dG~i~a~~~~~~~d~Gay~~~~~~v~~~~~~ 318 (768)
T TIGR03196 239 DDLNIQIHAALLALASGLPVKIAQDRKESFLGGIHRHPAKITFKHGADADGNLLAHDAKIVADGGAYASLGPAVLAFAVE 318 (768)
T ss_pred ccccHHHHHHHHHHHhCCCEEEEechHHhhhcCCCCCCeEEEEEEEECCCCcEEEEEEEEEecccccCCccHHHHHHHHH
Confidence 8875422 0 6666
Q ss_pred ---------E-----------------Ee-----hhHHHHHHHHHHHHHHcCCCHHHHHHhcCCcCCCccccccccC-CC
Q psy14046 783 ---------E-----------------VR-----EDDWIAETMGHHVAQFLKLDYADFARSNLFVTGNLTHYNQVLE-HC 830 (857)
Q Consensus 783 ---------~-----------------~r-----q~~~a~E~~id~iA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~-~~ 830 (857)
| +| |+.|++|++||++|++|||||+|||++|++++|+.+++|+++. +.
T Consensus 319 ~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~ 398 (768)
T TIGR03196 319 HAAGPYRIPNAHLEGISVFTNNGPAGAFRGFGGNQITFAHEAHLDRLADALGIDPLDLRRKNARKPGDLGPLEHRIAAPD 398 (768)
T ss_pred hcCCCcccceEEEEEEEEEcCCCCCCccCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCcCCCCcccCCcC
Confidence 2 22 9999999999999999999999999999999999999999986 78
Q ss_pred cHHHHHHHHHHhCCCh
Q psy14046 831 TLGRCFEQVHESGKYK 846 (857)
Q Consensus 831 ~~~~~l~~~~~~~~~~ 846 (857)
++++||++++++++|.
T Consensus 399 ~~~~~l~~~~~~~~w~ 414 (768)
T TIGR03196 399 GAAEVIEAIASRPLPK 414 (768)
T ss_pred CHHHHHHHHHhhcccc
Confidence 8999999999999998
No 13
>PRK09970 xanthine dehydrogenase subunit XdhA; Provisional
Probab=100.00 E-value=6.7e-65 Score=615.87 Aligned_cols=313 Identities=28% Similarity=0.427 Sum_probs=283.2
Q ss_pred CCCCccccccccccCccceecccCcCCCCCcEEEEEEeCCCCCeEEecCCchhhhhCCCeEEEEecCCCCCCCCC--CCc
Q psy14046 538 LVGRPIVHASAFKQATGEAIYCDDIPKYQTELYLAFVVSSKPHAKILSVDPSAALAMEGVRGWVDERDVPGQKNY--VGG 615 (857)
Q Consensus 538 ~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~vvt~~Dip~~~~~--~g~ 615 (857)
.||++++|+|+..||||+++|++|+ .+|||||++++|||++||+|+|||+++|++||||++|+|++|+|+.| . .+.
T Consensus 2 ~vG~~~~r~d~~~kvtG~~~Y~~D~-~~~gmL~a~~~rSp~aharI~siD~~~A~~~pGV~~Vvt~~D~p~~~-~~~~~~ 79 (759)
T PRK09970 2 AIGKSIMRVDAIAKVTGRAKYTDDY-VMAGMLYAKYVRSPIAHGKVKSIDTEEARSLPGVEAVFTWEDVPDIP-FPTAGH 79 (759)
T ss_pred CCCCCCcCcchHHhCcCCccccccC-CCCCCEEEEEEcCCCceEEEeeeeHHHHHhCCCcEEEEeHHHcCCcc-cccccc
Confidence 4899999999999999999999999 79999999999999999999999999999999999999999999654 2 111
Q ss_pred c--------ccccccccCCeEeecCCeEEEEEECCHHHHHHHhccceeEEeeCCCCCCHHHHHhcCC--CCCC-----CC
Q psy14046 616 I--------IHDDVIFARDVVTCVGQPIGGVIAEDQLIAQRAAALVKVTYEELPAIFSIQEAIEHKS--FFNL-----EP 680 (857)
Q Consensus 616 ~--------~~d~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~v~V~ye~lp~v~~~~~Al~~~~--~~~~-----~~ 680 (857)
. ..|+++|++++|+|+|||||+|||+|+++|++|+++|+|+||++|+++++++|+++++ +|++ ..
T Consensus 80 ~~~~~~~~~~~~~~~la~~~Vr~~G~~VAaVvA~~~~~A~~A~~~i~Veye~lp~v~~~~~Al~~~a~~ih~~~~ni~~~ 159 (759)
T PRK09970 80 PWSLDPNHRDIADRALLTRHVRHHGDAVAAVVARDELTAEKALKLIKVEYEELPVITDPEAALAEGAPPIHNGRGNLLKQ 159 (759)
T ss_pred ccCCCCCCCCCCCccCcCCEEEEcCCeEEEEEeCCHHHHHHHhCCCcEeEEeCCccCCHHHHhCCCCCccCCCCCceeee
Confidence 1 1378999999999999999999999999999999999999999999999999998876 4532 12
Q ss_pred ccccCCChhhhhhcCceeEEEEEEeCcccCCCCCCCceEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCCEEEEe
Q psy14046 681 SVYGRGNVDEEFLKVDHILEGEVSVGGQEHFYLETNVSVAVPKLEDGCMEIFVSSQHPSEIQEMTAHALGVPSNRIVAKT 760 (857)
Q Consensus 681 ~~~~~Gd~~~a~~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~~~l~v~~stQ~p~~~~~~vA~~Lglp~~~V~V~~ 760 (857)
..+..||++++|++|+++||++|++++|+|+||||++|+|+|+ ++|+|+||+|||+|+.+|..+|++||||++||+|++
T Consensus 160 ~~~~~Gd~~~a~~~a~~vve~~y~~~~~~h~~mEp~~~iA~~~-~~g~l~v~~stQ~p~~~~~~ia~~Lglp~~~VrV~~ 238 (759)
T PRK09970 160 STMSTGNVQQTIKAADYQVQGHYETPIVQHCHMENVTSYAYME-DDGRITIVSSTQIPHIVRRVVGQALGIPWGKVRVIK 238 (759)
T ss_pred eeeccCChhHhhccCCEEEEEEEEECCEeEeccCCceEEEEEC-CCCCEEEEECCCcHHHHHHHHHHHhCCCHHHEEEEe
Confidence 3467899999999999999999999999999999999999995 568999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCccc------------------------------------c-------CeEE---------------
Q psy14046 761 KRLGGGFGGKEKLQSEL------------------------------------Y-------GLFT--------------- 782 (857)
Q Consensus 761 ~~~GGgFGgK~~~~~~~------------------------------------y-------G~i~--------------- 782 (857)
+++|||||+|.+..... | |+|+
T Consensus 239 ~~vGGgFG~K~~~~~~~~aa~la~~~~grPVk~~~~R~E~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~Gay~~ 318 (759)
T PRK09970 239 PYVGGGFGNKQDVLEEPLAAFLTSKVGGRPVKVSLSREECFLATRTRHAFTIDIKMGVNRDGTLKGYSLDVLSNTGAYAS 318 (759)
T ss_pred CCCCCCcCcccccCHHHHHHHHHHHhcCCCeEEeechhHhhhcCCCCCceEEEEEEEECCCCcEEEEEEEEeeccccCCC
Confidence 99999999998765331 0 6666
Q ss_pred --------------------E-----------------Ee-----hhHHHHHHHHHHHHHHcCCCHHHHHHhcCCcCCCc
Q psy14046 783 --------------------E-----------------VR-----EDDWIAETMGHHVAQFLKLDYADFARSNLFVTGNL 820 (857)
Q Consensus 783 --------------------~-----------------~r-----q~~~a~E~~id~iA~~lg~DP~e~R~~Nl~~~g~~ 820 (857)
| +| |+.|++|++||++|++|||||+|||++|++++|+.
T Consensus 319 ~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~~A~~lg~DP~e~R~~N~~~~g~~ 398 (759)
T PRK09970 319 HGHSIASAGGNKVAYLYPRCAYKYSSKTVYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEFRLRNAAREGDA 398 (759)
T ss_pred cchHHHHHHHhhcCCCccCceEEEEEEEEECCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCc
Confidence 2 22 99999999999999999999999999999999999
Q ss_pred ccc-ccccCCCcHHHHHHHHHHhCCChhHHHHHH
Q psy14046 821 THY-NQVLEHCTLGRCFEQVHESGKYKERRKQCE 853 (857)
Q Consensus 821 ~~~-g~~~~~~~~~~~l~~~~~~~~~~~r~~~~~ 853 (857)
+++ |+.++++++++||+++++.++|++|+++.+
T Consensus 399 ~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~ 432 (759)
T PRK09970 399 NPLSGKRIYSAGLPECLEKGRKIFEWDKRRAECK 432 (759)
T ss_pred CCCCCeeecCCCHHHHHHHHHHhcCchhhhHhHh
Confidence 986 899999999999999999999998876554
No 14
>TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit. This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=100.00 E-value=3.5e-64 Score=607.28 Aligned_cols=304 Identities=28% Similarity=0.380 Sum_probs=276.7
Q ss_pred cccccccccCccceecccCcCCCCCcEEEEEEeCCCCCeEEecCCchhhhhCCCeEEEEecCCCCCCCCCCCc--ccccc
Q psy14046 543 IVHASAFKQATGEAIYCDDIPKYQTELYLAFVVSSKPHAKILSVDPSAALAMEGVRGWVDERDVPGQKNYVGG--IIHDD 620 (857)
Q Consensus 543 ~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~vvt~~Dip~~~~~~g~--~~~d~ 620 (857)
++|+|+..||||+++|++|+ .+|||||++++|||++||+|++||+++|++||||++|+|++|+|. + .+. ...|+
T Consensus 1 ~~R~d~~~kvtG~a~Y~~D~-~~pgmL~a~vvrSp~ahA~I~siD~s~A~a~pGV~~V~t~~D~p~-~--~g~~~~~~d~ 76 (746)
T TIGR03194 1 VPLVDGVEKVTGKAKYTADL-AAPGALVGRILRSPHAHARILAIDTSEAEALPGVIAVVTGADCPV-P--YGVLPIAENE 76 (746)
T ss_pred CcCcchHhhCccccccccCC-CCCCCEEEEEEecCCccEEEeeccHHHHHhCCCcEEEEeHHHCCc-c--cCCCCCCCCC
Confidence 47999999999999999999 789999999999999999999999999999999999999999984 3 131 23589
Q ss_pred ccccCCeEeecCCeEEEEEECCHHHHHHHhccceeEEeeCCCCCCHHHHHhcCCC--CCCC------CccccCCChhhhh
Q psy14046 621 VIFARDVVTCVGQPIGGVIAEDQLIAQRAAALVKVTYEELPAIFSIQEAIEHKSF--FNLE------PSVYGRGNVDEEF 692 (857)
Q Consensus 621 ~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~v~V~ye~lp~v~~~~~Al~~~~~--~~~~------~~~~~~Gd~~~a~ 692 (857)
|+|++++|+|+|||||+|||+|+++|++|+++|+|+||+||+++|+++|+++++. |+.. ...+..||++++|
T Consensus 77 ~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Veye~lp~v~d~~~Al~~~a~~ih~~~~~Nv~~~~~~~~Gd~~~a~ 156 (746)
T TIGR03194 77 YPLARDKVRYRGDPVAAVAAVDEVTAEKALALIKVEYEELPAYMDPKAAMKAGAILLHDNKPGNIEREVHNEFGDVAAAF 156 (746)
T ss_pred ccCCCCeEEEcCCeEEEEEECCHHHHHHHhcCCcEEEecCCCcCCHHHHhcCCCCccCCCCCCcEEEEEeeccCCHhHHh
Confidence 9999999999999999999999999999999999999999999999999998873 5421 1345789999999
Q ss_pred hcCceeEEEEEEeCcccCCCCCCCceEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCCEEEEecccCCCCCCCCC
Q psy14046 693 LKVDHILEGEVSVGGQEHFYLETNVSVAVPKLEDGCMEIFVSSQHPSEIQEMTAHALGVPSNRIVAKTKRLGGGFGGKEK 772 (857)
Q Consensus 693 ~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~~~l~v~~stQ~p~~~~~~vA~~Lglp~~~V~V~~~~~GGgFGgK~~ 772 (857)
++|+++||++|++++|+|+||||++|+|+|+.++|+|+||+|||+|+.+|..+|++||||.+||+|+++++|||||+|..
T Consensus 157 ~~a~~vve~~~~~~~~~h~~mEp~~~~A~~~~~~~~l~v~~stQ~p~~~r~~va~~Lglp~~kVrV~~~~vGGgFG~K~~ 236 (746)
T TIGR03194 157 AEADLIREKTFTCAEVNHAHMEPNATLAEYDPVRGMLTLNSVTQVPYYVHLKLARCLQMDSARIRVIKPFLGGGFGARVE 236 (746)
T ss_pred ccCCEEEEEEEEECCEeEEccCCCeEEEEEeCCCCeEEEEECCCchHHHHHHHHHHhCCCHHHeEEEcCCCcCccccccc
Confidence 99999999999999999999999999999963357899999999999999999999999999999999999999999988
Q ss_pred CC-ccc-----------------------------------c-------CeEE---------------------------
Q psy14046 773 LQ-SEL-----------------------------------Y-------GLFT--------------------------- 782 (857)
Q Consensus 773 ~~-~~~-----------------------------------y-------G~i~--------------------------- 782 (857)
.. ..+ | |+|+
T Consensus 237 ~~~~~~~aal~a~~~grPVk~~~~ReE~~~~~~~R~~~~~~~~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~ 316 (746)
T TIGR03194 237 PLNFEIIAGLLARKAKGTVRLLQTREETFITHRGRPQTYVKMKIGLKKDGKITACAAEVVQRGGAYAGYGIVTILYAGAL 316 (746)
T ss_pred cchHHHHHHHHHHHhCCCEEEecchhhhhhcCCCCCceEEEEEEEECCCCeEEEEEEEEeecccccCCcchHHHHHHHHh
Confidence 64 211 0 6666
Q ss_pred --------E-----------------Ee-----hhHHHHHHHHHHHHHHcCCCHHHHHHhcCCcCCCccccccccCCCcH
Q psy14046 783 --------E-----------------VR-----EDDWIAETMGHHVAQFLKLDYADFARSNLFVTGNLTHYNQVLEHCTL 832 (857)
Q Consensus 783 --------~-----------------~r-----q~~~a~E~~id~iA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~~ 832 (857)
| +| |+.|++|++||++|++|||||+|||++|++++|+.+++|+.++++++
T Consensus 317 ~~g~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~lA~~lg~DPve~R~~N~~~~~~~~~~g~~~~s~~~ 396 (746)
T TIGR03194 317 LHGLYDIPAVKYDGYRVYTNTPPCGAMRGHGTVDTRAAFESLLDEMAAELGIDPFAIRRRNLLQAPTVTMNDLRVMSYGL 396 (746)
T ss_pred cCCCcccceEEEEEEEEEcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCcCCCCCCCCCceecCCCH
Confidence 2 22 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhHHH
Q psy14046 833 GRCFEQVHESGKYKERRK 850 (857)
Q Consensus 833 ~~~l~~~~~~~~~~~r~~ 850 (857)
++||++++++++|.+|++
T Consensus 397 ~~~l~~~~e~~~w~~~~~ 414 (746)
T TIGR03194 397 PECLEKVEQASGWEERKG 414 (746)
T ss_pred HHHHHHHHHhcCchhhhh
Confidence 999999999999987754
No 15
>TIGR02416 CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large subunit. This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins.
Probab=100.00 E-value=3.1e-62 Score=592.83 Aligned_cols=308 Identities=23% Similarity=0.278 Sum_probs=267.9
Q ss_pred cccccCccceecccCcCCCCCcEEEEEEeCCCCCeEEecCCchhhhhCCCeEEEEecCCCCCCCCCC-Cccc-ccccccc
Q psy14046 547 SAFKQATGEAIYCDDIPKYQTELYLAFVVSSKPHAKILSVDPSAALAMEGVRGWVDERDVPGQKNYV-GGII-HDDVIFA 624 (857)
Q Consensus 547 d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~vvt~~Dip~~~~~~-g~~~-~d~~~~a 624 (857)
|+.++|||+++|++|+ .+|||||++++|||++||+|++||+++|++||||++|+|++|+|+.+... +... .++|+|+
T Consensus 1 e~~r~vtG~a~Y~~Di-~~pgmL~a~~vrSp~aha~I~~ID~s~A~~~pGV~~V~t~~D~p~~~~~~~~~~~~~~~~~la 79 (770)
T TIGR02416 1 EDIRFIQGKGNYVDDV-KLPGMLHGDIVRSPHAHARIKSIDTSAAKALPGVFAVLTAADLKPLNLHWMPTLAGDVQAVLA 79 (770)
T ss_pred CCcccccccccccccC-CCCCCEEEEEEcCCCccEEEecccHHHHhhCCCcEEEEEHHHcCCccCCcCCCCCCCCcccCc
Confidence 4678999999999999 79999999999999999999999999999999999999999998654111 2111 2389999
Q ss_pred CCeEeecCCeEEEEEECCHHHHHHHhccceeEEeeCCCCCCHHHHHhcCC--CCCCCC----------------ccc---
Q psy14046 625 RDVVTCVGQPIGGVIAEDQLIAQRAAALVKVTYEELPAIFSIQEAIEHKS--FFNLEP----------------SVY--- 683 (857)
Q Consensus 625 ~~~V~y~GqpVa~VvAet~~~A~~Aa~~v~V~ye~lp~v~~~~~Al~~~~--~~~~~~----------------~~~--- 683 (857)
+++|+|+|||||+|||+|+++|++|+++|+|+||++|+++|+++|+++++ +|+... ...
T Consensus 80 ~~~Vry~Ge~Va~VvA~t~~~A~~A~~~v~V~ye~lp~v~d~~~A~~~~a~~ih~~~~~~~~~~~~~~n~~~~~~~~~~g 159 (770)
T TIGR02416 80 DEKVLFQNQEVAFVVAKDRYVAADAIELVEVDYEPLPVVIDPFKALEPDAPVLREDLKGKTTGAHGARKHHNHIFRWEIG 159 (770)
T ss_pred CCEEEEcCCcEEEEEECCHHHHHHHhccceeeeecCCccCCHHHHhcCCCceecCCCCCccccccccccccceeeEEecC
Confidence 99999999999999999999999999999999999999999999998776 343210 012
Q ss_pred cCCChhhhhhcCceeEEEEEEeCcccCCCCCCCceEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCCEEEEeccc
Q psy14046 684 GRGNVDEEFLKVDHILEGEVSVGGQEHFYLETNVSVAVPKLEDGCMEIFVSSQHPSEIQEMTAHALGVPSNRIVAKTKRL 763 (857)
Q Consensus 684 ~~Gd~~~a~~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~~~l~v~~stQ~p~~~~~~vA~~Lglp~~~V~V~~~~~ 763 (857)
..||++++|++|+++||++|++++|+|+||||++|+|+|+.++|+|+||+|||+|+.+|..||++||||++||+|+++++
T Consensus 160 d~gd~~~af~~a~~vve~~~~~~~~~h~~mEp~~~iA~~~~~~g~l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~~v 239 (770)
T TIGR02416 160 DKAATDAVFAKAEVVVKQMMTYPRVHPSPLETCGCVASMDPIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIRVISPDI 239 (770)
T ss_pred CccchhHHhccCCEEEEEEEEeCceeeEcCCCCeEEEEEeCCCCeEEEEECCCcHHHHHHHHHHHhCCCHHHEEEEcCCC
Confidence 34567999999999999999999999999999999999952358999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcc-c-----------------------------------c-------CeEE------------------
Q psy14046 764 GGGFGGKEKLQSE-L-----------------------------------Y-------GLFT------------------ 782 (857)
Q Consensus 764 GGgFGgK~~~~~~-~-----------------------------------y-------G~i~------------------ 782 (857)
|||||+|...... + | |+|+
T Consensus 240 GGgFG~K~~~~~~~~~aa~~A~~~gRPVk~~~sR~E~~~~~~~r~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~ 319 (770)
T TIGR02416 240 GGGFGNKVGIYPGYVCAIVASIVLGVPVKWVEDRMENLSTTSFARDYHMTGELAATKDGKILAMRCNVLADHGAFDACAD 319 (770)
T ss_pred CCCcccccccccHHHHHHHHHHHhCCCEEEecchHHhhhcCCCCCceEEEEEEEECCCCcEEEEEEEEEeeccccCCCcc
Confidence 9999999876422 1 0 6655
Q ss_pred -------------------E------------------Ee------hhHHHHHHHHHHHHHHcCCCHHHHHHhcCCcCCC
Q psy14046 783 -------------------E------------------VR------EDDWIAETMGHHVAQFLKLDYADFARSNLFVTGN 819 (857)
Q Consensus 783 -------------------~------------------~r------q~~~a~E~~id~iA~~lg~DP~e~R~~Nl~~~g~ 819 (857)
| +| |+.|++|++||++|++|||||+|||++|++++++
T Consensus 320 ~~~~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~p~gta~Rgg~G~pq~~fa~E~~mD~~A~~lg~DP~e~R~~N~~~~~~ 399 (770)
T TIGR02416 320 PSKWPAGFFNICTGSYDIPVAHCAVDGVYTNKAPGGVAYRCSFRVTEAVYAIERAVDTLAQRLEMDSADLRIKNFIQPEQ 399 (770)
T ss_pred chhhhhhhhhhcCCccccceEEEEEEEEECCCCCCCCccccCCccHHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCcc
Confidence 1 22 8999999999999999999999999999998855
Q ss_pred ---ccccccccCCCcHHHHHHHHHHhCCChhHHHHHHhh
Q psy14046 820 ---LTHYNQVLEHCTLGRCFEQVHESGKYKERRKQCEEF 855 (857)
Q Consensus 820 ---~~~~g~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~f 855 (857)
.+++|+.++++++++||+++++.++|++|+++.+++
T Consensus 400 ~p~~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~ 438 (770)
T TIGR02416 400 FPYTAPLGWEYDSGDYPLAMKKAMDTVDYHQLRAEQAAK 438 (770)
T ss_pred CccccCCCceecCCCHHHHHHHHHHhcCchhhHHHHHHH
Confidence 345699999999999999999999999887765544
No 16
>PRK09971 xanthine dehydrogenase subunit XdhB; Provisional
Probab=100.00 E-value=4.7e-60 Score=513.85 Aligned_cols=279 Identities=29% Similarity=0.367 Sum_probs=261.8
Q ss_pred EEEccCCHHHHHHHHHhCCCCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceec-CCeEEEcccccHHHHHHHHH
Q psy14046 173 TWYRPQTLTQLLELKAKFPEAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVE-ENGVWIGGATSLNDMRAILS 251 (857)
Q Consensus 173 ~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~-~~~l~IGA~vTl~~l~~~l~ 251 (857)
+|++|+|++||+++|+++++++++||||||+++++.+...|+++|||++|+||++|+.+ +++|+|||+|||++++++
T Consensus 6 ~~~~P~sl~Ea~~ll~~~~~a~ivaGGTdl~~~~~~~~~~p~~lIdl~~i~eL~~I~~~~~~~l~IGA~vt~~~l~~~-- 83 (291)
T PRK09971 6 EYHEAATLEEAIELLADNPQAKLIAGGTDVLIQLHHHNDRYRHLVSIHNIAELRGITLAEDGSIRIGAATTFTQIIED-- 83 (291)
T ss_pred ceeCCCCHHHHHHHHHhCCCCEEEeccchHHHHHhCCCCCCCeEEEcCCChhhhCeEecCCCEEEEEeCCcHHHHhcC--
Confidence 79999999999999999999999999999999999999999999999999999999965 577999999999999874
Q ss_pred HHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccCCCCCHHHHHhhcCcEEEEEEcCCCeEEEEcccccccc
Q psy14046 252 EQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGSPISDMNPILMAARCRLLLESKAEGTREVTMDGSFYTS 331 (857)
Q Consensus 252 ~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~asp~sDl~p~LlAldA~v~l~s~~~G~R~vpl~e~F~~g 331 (857)
+.....+|.|.++++.||++||||+||||||||+++|+||++|+|+||||+|+|.+. +|+|++|++| ||.|
T Consensus 84 -------~~i~~~~p~L~~a~~~ia~~qIRN~aTiGGNi~~a~p~sD~~~~Llal~A~v~i~~~-~g~R~vp~~d-f~~g 154 (291)
T PRK09971 84 -------PIIQKHLPALAEAAVSIGGPQIRNVATIGGNICNGATSADSAPPLFALDAKLEIHSP-NGVRFVPING-FYTG 154 (291)
T ss_pred -------hHHHHHhHHHHHHHHHhCCHHHhcceecccccccCCcchhHHHHHHHcCCEEEEEcC-CCcEEEEHHH-hcCC
Confidence 233468999999999999999999999999999999999999999999999999999 8999999999 9999
Q ss_pred cccccCCCCcEEEEEEecCCC-ccchhhheeeeccCCCchhheeeeEEEEEeecCCceEEeEeEEEEecCCCcceeHHHH
Q psy14046 332 YRKNIVRPDEVLRAIYIPHTA-ETQYFKAYKQARRRDDDIAIVNAAFNVTLDIQSDGAVVKDCEFAFGGMAPTTVLAKKT 410 (857)
Q Consensus 332 ~~~t~L~~~EiI~~I~iP~~~-~~~~~~~~K~~~R~~~d~a~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~ 410 (857)
+++|.|+++|||++|+||.+. .+..+.+||+++|+++|||+||+|+.+.++ +| +|+++||+|||++++|+|+.++
T Consensus 155 ~~~t~l~~~Eil~~I~iP~~~~~~~~~~~~K~~~R~~~~~a~v~~a~~~~~~--~g--~i~~~ria~G~v~~~p~r~~~~ 230 (291)
T PRK09971 155 PGKVSLEHDEILVAFIIPPEPYEHAGGAYIKYAMRDAMDIATIGCAVLCRLD--NG--NFEDLRLAFGVAAPTPIRCQHA 230 (291)
T ss_pred ccccccCCCceEEEEEeCCCCCCCCceEEEEEcccchhhHhHheeEEEEEEc--CC--EEEEEEEEEEcccCceeeHHHH
Confidence 999999999999999999743 345566889999999999999999999986 56 8999999999999999999999
Q ss_pred HHHHhCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy14046 411 TEQMINKPWNQSLLEDTWRNLMADLPLDHSAPGGMIQYRRSLTLSLFYKFYIAVSVD 467 (857)
Q Consensus 411 E~~L~Gk~~~~~~l~~a~~~l~~~i~~p~~d~~gs~~YRr~la~~ll~r~l~~~~~~ 467 (857)
|++|.|+.|++++++++.+.+.+++. |.+|.++|++||++|+.+|++|++.++...
T Consensus 231 E~~L~G~~~~~~~~~~a~~~~~~~~~-p~~d~~~s~~YR~~l~~~l~~r~l~~~~~~ 286 (291)
T PRK09971 231 EQTAKGAPLNLETLEAIGELVLQDVA-PRSSWRASKEFRLHLIQELTKRVIKEAVAA 286 (291)
T ss_pred HHHhCCCCCCHHHHHHHHHHHHhcCC-CCCCCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 889999999999999999999999998654
No 17
>TIGR03195 4hydrxCoA_B 4-hydroxybenzoyl-CoA reductase, beta subunit. This model represents the second largest chain, beta, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=100.00 E-value=3.1e-56 Score=484.81 Aligned_cols=277 Identities=19% Similarity=0.250 Sum_probs=254.2
Q ss_pred CcEEEccCCHHHHHHHHHhCCCCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEcccccHHHHHHHH
Q psy14046 171 RATWYRPQTLTQLLELKAKFPEAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGATSLNDMRAIL 250 (857)
Q Consensus 171 ~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l 250 (857)
.|+|++|+|++||++++++++++++++|||||+++++.+...|+.+|||++|+||++|+.++++|+|||+|||++|+++
T Consensus 4 ~f~~~~P~sl~eA~~ll~~~~~a~ivaGGTdl~~~~~~~~~~p~~lIdi~~I~eL~~I~~~~~~l~IGA~vT~~~l~~~- 82 (321)
T TIGR03195 4 DFRTLRPASLADAVAALAAHPAARPLAGGTDLLPNLRRGLGQPETLVDLTGIDEIAQLSTLADGLRIGAGVTLAALAED- 82 (321)
T ss_pred CceEECCCCHHHHHHHHhhCCCCEEEEccchHHHHHhcccCCCCeEEECCCChhhccEEecCCEEEEeccCcHHHHhhC-
Confidence 5899999999999999999999999999999999999888899999999999999999999999999999999999886
Q ss_pred HHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCccc--------------------------------------c
Q psy14046 251 SEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIM--------------------------------------T 292 (857)
Q Consensus 251 ~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~--------------------------------------~ 292 (857)
+.+...+|+|+++++.||++||||+|||||||| +
T Consensus 83 --------~~i~~~~p~L~~a~~~ias~qIRN~aTiGGNi~~~~~c~~~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~c~ 154 (321)
T TIGR03195 83 --------ALVRTRWPALAQAARAVAGPTHRAAATLGGNLCLDTRCIYYNQSEWWRSGNGYCLKYRGDKCHVAPKSDRCY 154 (321)
T ss_pred --------hhhHhHhHHHHHHHHHhCCHHHhCceecHHhhhccCCCcccccccccccccccccccCCccccccCCCcccc
Confidence 234468999999999999999999999999999 5
Q ss_pred cCCCCCHHHHHhhcCcEEEEEEcCCCeEEEEcccccccc--cccccCCCCcEEEEEEecCCCccchhhheeeeccCCCch
Q psy14046 293 GSPISDMNPILMAARCRLLLESKAEGTREVTMDGSFYTS--YRKNIVRPDEVLRAIYIPHTAETQYFKAYKQARRRDDDI 370 (857)
Q Consensus 293 asp~sDl~p~LlAldA~v~l~s~~~G~R~vpl~e~F~~g--~~~t~L~~~EiI~~I~iP~~~~~~~~~~~K~~~R~~~d~ 370 (857)
++|+||++|+|+||||+|+|.+. +|+|+||++| ||.+ .++|.|+++|||++|+||.+. +..+.|+|+.+|...||
T Consensus 155 a~p~sD~~~~LlAldA~v~i~~~-~g~R~vpl~d-F~~~~g~~~t~L~~~Eiit~I~iP~~~-~~~~~y~k~~~r~a~~~ 231 (321)
T TIGR03195 155 AAFSGDVAPALLVLDAEAEIVGP-AGVRRVPLAE-LYVEDGAAHLTLEPGEVLAAVRVPPTG-GWTSAYSKVRVRGAIDF 231 (321)
T ss_pred CCCchHHHHHHHHcCCEEEEEeC-CccEEEEHHH-HhcccCCccccCCCCCeEEEEEecCCC-CCccEEEEEecCccccc
Confidence 77899999999999999999999 8999999999 9994 457999999999999999753 34455567777788999
Q ss_pred hheeeeEEEEEeecCCceEEeEeEEEEecCCCcceeHHHHHHHHhCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHH
Q psy14046 371 AIVNAAFNVTLDIQSDGAVVKDCEFAFGGMAPTTVLAKKTTEQMINKPWNQSLLEDTWRNLMADLPLDHSAPGGMIQYRR 450 (857)
Q Consensus 371 a~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~~i~~p~~d~~gs~~YRr 450 (857)
+++++|+.++.+ ++ +|+++||+|||++++|+|++++ ++|.|+.|++++++++.+++.+++. |.++.++|++||+
T Consensus 232 ~~~~vav~l~~~--~~--~i~~~ria~Ggva~~p~r~~~~-e~l~G~~~~~~~~~~a~~~~~~~~~-p~~d~~~s~~YRr 305 (321)
T TIGR03195 232 PLAGVAVALQRD--GD--RIAGLRVALTGTNSRPLMVPGT-DALAGRPLDDAAAEEIARLVRKTSQ-PMRTTLMGVKYRR 305 (321)
T ss_pred eeEEEEEEEEeC--CC--eEEEEEEEEECccCceeehHHH-HHhcCCCCCHHHHHHHHHHHHhhCC-CccCCCCCHHHHH
Confidence 999999888775 56 8999999999999999999998 5589999999999999999999999 8899999999999
Q ss_pred HHHHHHHHHHHHHHh
Q psy14046 451 SLTLSLFYKFYIAVS 465 (857)
Q Consensus 451 ~la~~ll~r~l~~~~ 465 (857)
+|+.+|++|++.++.
T Consensus 306 ~l~~~l~~r~~~~~~ 320 (321)
T TIGR03195 306 RVLLAIARRLVDQLW 320 (321)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998764
No 18
>TIGR03199 pucC xanthine dehydrogenase C subunit. This gene has been characterized in B. subtilis as the FAD binding-subunit of xanthine dehydrogenase (pucC), acting in conjunction with pucD, the molybdopterin-binding subunit and pucE, the FeS-binding subunit.
Probab=100.00 E-value=3.3e-54 Score=462.39 Aligned_cols=261 Identities=23% Similarity=0.365 Sum_probs=241.2
Q ss_pred cCCHHHHHHHHHhCCCCEEEecCcchhhhhhcC-CCCCCeeecCCCCCCCCCceecCCeEEEcccccHHHHHHHHHHHhh
Q psy14046 177 PQTLTQLLELKAKFPEAKLVVGNSEIGVEVKFK-KFFYPVLIQPSLIPELTQPRVEENGVWIGGATSLNDMRAILSEQIE 255 (857)
Q Consensus 177 P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~-~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~ 255 (857)
|+||+||+++|+++++++++||||+|++.++.+ ...|+.+|||++|+||++|+.++++|+|||+|||++++++
T Consensus 1 P~sl~ea~~ll~~~~~a~ivaGgT~l~~~~~~~~~~~~~~lIdi~~i~eL~~I~~~~~~l~IGA~vt~~~l~~~------ 74 (264)
T TIGR03199 1 PAALDEAWSLLEKAPDSTFVSGSTLLQLQWEKGTLPMKQHLVSLEGIDELKGISTSDTHVSIGALTTLNECRKN------ 74 (264)
T ss_pred CCCHHHHHHHHHhCCCCEEEEccChHHHHHhcCcCCCCCeEEEcCCChhhCcEEecCCEEEEecCCcHHHHhhC------
Confidence 899999999999999999999999999999876 4668999999999999999999999999999999999865
Q ss_pred hcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccCCCCCHHHHHhhcCcEEEEEEcCCCeEEEEcccccccccccc
Q psy14046 256 KLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGSPISDMNPILMAARCRLLLESKAEGTREVTMDGSFYTSYRKN 335 (857)
Q Consensus 256 ~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~asp~sDl~p~LlAldA~v~l~s~~~G~R~vpl~e~F~~g~~~t 335 (857)
+...+.+|.|+++++.|||+||||+||||||||++ +||++|+|+||||+|+|.+ +|+|+||+++ ||.+ +
T Consensus 75 ---~~i~~~~p~L~~a~~~ia~~qIRN~aTlGGNl~~~--~sD~~p~Llal~A~v~i~~--~g~r~vp~~~-f~~~---~ 143 (264)
T TIGR03199 75 ---PLIKRALPCFVDAASAIAAPGVRNRATIGGNIASG--IGDFIPALLVLGAELIVYQ--KELIRLPLGA-WLSE---E 143 (264)
T ss_pred ---hHhHhHhHHHHHHHHHhcCHHHhcceecHHhccCc--ccchHHHHHHcCCEEEEEe--CCEEEEEHHH-hhhc---c
Confidence 22356899999999999999999999999999998 7999999999999999998 4799999999 9984 6
Q ss_pred cCCCCcEEEEEEe-cCCCccchhhheeeeccCCCchhheeeeEEEEEeecCCceEEeEeEEEEecCCCcceeHHHHHHHH
Q psy14046 336 IVRPDEVLRAIYI-PHTAETQYFKAYKQARRRDDDIAIVNAAFNVTLDIQSDGAVVKDCEFAFGGMAPTTVLAKKTTEQM 414 (857)
Q Consensus 336 ~L~~~EiI~~I~i-P~~~~~~~~~~~K~~~R~~~d~a~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L 414 (857)
.|.++|||++|.| |.+..+..+.+||+++|..+++++||+|+.+.+++ ++ +|+++||+|||++++|+|+.++|++|
T Consensus 144 ~l~~~Eii~~I~i~p~~~~~~~~~~~k~~~R~~~~~a~v~~a~~~~~~~-~~--~i~~~ria~Ggv~~~p~r~~~~E~~L 220 (264)
T TIGR03199 144 DFKPTAIVTRVIIGPRAETGEFVFYHKVGRRETFTGSLVVVAGRFLLDG-SQ--TIKEIRLAVGGADITPRRLLDSEAKL 220 (264)
T ss_pred CCCCCcEEEEEEEECCCCCCCcEEEEEEeccchhHHHHheeeEEEEEcC-CC--eEEEEEEEeecCCCceeeHHHHHHHh
Confidence 8999999999999 76644566778899999999999999999998863 46 89999999999999999999999999
Q ss_pred hCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHHH
Q psy14046 415 INKPWNQSLLEDTWRNLMADLPLDHSAPGGMIQYRRSLTLSLFY 458 (857)
Q Consensus 415 ~Gk~~~~~~l~~a~~~l~~~i~~p~~d~~gs~~YRr~la~~ll~ 458 (857)
.|++|++++++++.+.+.+++. |.+|+++|++||++|+.+|+.
T Consensus 221 ~G~~~~~~~~~~a~~~~~~~~~-p~~d~~~s~~YR~~l~~~~~~ 263 (264)
T TIGR03199 221 MAPPWDPHLLAELYKTIIQELP-FSSDPFATAAYRKKVAANVIV 263 (264)
T ss_pred cCCCCCHHHHHHHHHHHHhhCC-CCCCCCCCHHHHHHHHHHHhc
Confidence 9999999999999999999999 888999999999999999874
No 19
>COG1319 CoxM Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]
Probab=100.00 E-value=1.2e-53 Score=453.50 Aligned_cols=278 Identities=26% Similarity=0.382 Sum_probs=255.3
Q ss_pred CcEEEccCCHHHHHHHHHhCCCCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCe-EEEcccccHHHHHHH
Q psy14046 171 RATWYRPQTLTQLLELKAKFPEAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENG-VWIGGATSLNDMRAI 249 (857)
Q Consensus 171 ~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~-l~IGA~vTl~~l~~~ 249 (857)
.|+|+||+|++||+.+++..+++++++|||+|..+||.+...|..+|||++|+++..+...+++ |+|||+||+++|..+
T Consensus 3 ~f~y~rp~Sv~eA~~ll~~~~~a~~laGGt~L~~~~k~~~~~p~~lVdI~~l~~~~~~~~~~g~~l~IGA~vt~~ei~~~ 82 (284)
T COG1319 3 NFEYYRPASVEEALNLLARAPDAKYLAGGTDLLPLMKLGIERPDHLVDINGLDELLGIVTTEGGSLRIGALVTLTEIARH 82 (284)
T ss_pred ceEEECCCCHHHHHHHHHhCCCcEEeeCcchHHHHhhcccCCcceEEEecCChhhhceEeecCCEEEEeecccHHHHHhC
Confidence 5899999999999999999899999999999999999999999999999999988888777555 999999999999987
Q ss_pred HHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccCCCCCHHHHHhhcCcEEEEEEcCCCeEEEEcccccc
Q psy14046 250 LSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGSPISDMNPILMAARCRLLLESKAEGTREVTMDGSFY 329 (857)
Q Consensus 250 l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~asp~sDl~p~LlAldA~v~l~s~~~G~R~vpl~e~F~ 329 (857)
+.++..+|+|.+++..+|++||||+||||||||+++|.+|++|+|+||||+|++.++ .|+|++|+++ ||
T Consensus 83 ---------~~~~~~~p~L~ea~~~ia~~qvRN~aTiGGn~c~a~p~aD~~~aLlaLdA~v~~~~~-~g~r~i~~~~-f~ 151 (284)
T COG1319 83 ---------PAVRRIPPALSEAASAIASPQVRNRATIGGNLCNADPAADLAPALLALDAEVEIRSP-GGERTIPIED-FF 151 (284)
T ss_pred ---------hhhhhhchHHHHHHHHhcChhhcceeeecchhccCCCchhhHHHHHHcCCEEEEecC-CccEEEEHHH-hh
Confidence 235679999999999999999999999999999999999999999999999999999 8999999999 99
Q ss_pred cccccccCCCCcEEEEEEecCCCccchhhhe-eeeccCCCchhheeeeEEEEEeecCCceEEeEeEEEEecCCCcceeHH
Q psy14046 330 TSYRKNIVRPDEVLRAIYIPHTAETQYFKAY-KQARRRDDDIAIVNAAFNVTLDIQSDGAVVKDCEFAFGGMAPTTVLAK 408 (857)
Q Consensus 330 ~g~~~t~L~~~EiI~~I~iP~~~~~~~~~~~-K~~~R~~~d~a~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~ 408 (857)
.++++|.|++|||||+|.||.+. +....+| |+.+|...+++.|++|..+.. + +|+++||++||++++|+|+.
T Consensus 152 ~~p~~t~l~~gelit~v~lP~~~-~~~~~~~kk~r~r~~~~~~~vsvA~~~~~----~--~v~~~RvAlgg~a~~p~R~~ 224 (284)
T COG1319 152 RGPGETALEPGELITAVILPPPP-AARGAYYKKVRRRASFAIALVSVAAKLRG----D--RVSEARVALGGVAPKPWRLE 224 (284)
T ss_pred cCccccccCCCcEEEEEEcCCCc-cCCccEEEEeecchhhhHHHHHHHhhhcc----c--ceeeeeeeecccCCcceehH
Confidence 99999999999999999999983 3444556 445566778888888876653 3 79999999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy14046 409 KTTEQMINKPWNQSLLEDTWRNLMADLPLDHSAPGGMIQYRRSLTLSLFYKFYIAVSVD 467 (857)
Q Consensus 409 ~~E~~L~Gk~~~~~~l~~a~~~l~~~i~~p~~d~~gs~~YRr~la~~ll~r~l~~~~~~ 467 (857)
++|+.|.|++++++.++.+.+.+.+++. |.+|+++|.+||++|+++++.|.+.++...
T Consensus 225 ~~E~~L~~~~l~~~~~~~~~~~~~~~~~-p~~d~r~s~~yr~~l~~~~~~ral~~a~~~ 282 (284)
T COG1319 225 DAEAALLGKPLSLETLEAAAEAAMQEAA-PISDVRGSAEYRRKLAKVLLARALAEAQGR 282 (284)
T ss_pred HHHHHhhCCCCChHHHHHHHHHhhcccC-CcccccchHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999 888999999999999999999999998754
No 20
>PRK09799 putative oxidoreductase; Provisional
Probab=100.00 E-value=1.8e-50 Score=430.69 Aligned_cols=250 Identities=22% Similarity=0.348 Sum_probs=222.9
Q ss_pred EEEccCCHHHHHHHHHhCC-CCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEcccccHHHHHHHHH
Q psy14046 173 TWYRPQTLTQLLELKAKFP-EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGATSLNDMRAILS 251 (857)
Q Consensus 173 ~~~~P~sl~eal~ll~~~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l~ 251 (857)
+|++|+|++||++++++++ +++++||||+|++.+ +...++.+|||++| ||++|+.++++|+|||+|||+++.++..
T Consensus 4 ~y~~P~sl~Ea~~ll~~~~~~a~ilAGGT~L~~~~--~~~~~~~lIdi~~i-eL~~I~~~~~~l~IGA~vT~~~l~~~~~ 80 (258)
T PRK09799 4 QFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATP--TRTDKKIAISLQDL-ELDWIEWDNGALRIGAMSRLQPLRDARF 80 (258)
T ss_pred cEeCCCCHHHHHHHHHhCCCCCEEEecCCChHhhh--CCCCCCEEEEcCCC-CCCeEEecCCEEEEccCCcHHHHHhCcc
Confidence 6999999999999999985 699999999998864 45567899999999 9999999999999999999999987621
Q ss_pred HHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccCCCCCHHHHHhhcCcEEEEEEcCCCeEEEEcccccccc
Q psy14046 252 EQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGSPISDMNPILMAARCRLLLESKAEGTREVTMDGSFYTS 331 (857)
Q Consensus 252 ~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~asp~sDl~p~LlAldA~v~l~s~~~G~R~vpl~e~F~~g 331 (857)
..+.|+++++.|||+||||+||||||||+++|+||++|+|+||||+|+|.+. |++|++| ||.|
T Consensus 81 ------------~~~~L~~a~~~vas~qIRN~aTiGGNl~~a~p~sD~~p~LlAldA~v~l~~~----r~vpl~~-f~~g 143 (258)
T PRK09799 81 ------------IPAALREALGFVYSRHLRNQSTIGGEIAARQEESVLLPVLLALDAELVFGNG----ETLSIED-YLAC 143 (258)
T ss_pred ------------cHHHHHHHHHHhCCHHHhccchhHHHhhcCCccHHHHHHHHHcCCEEEEecC----cEEeHHH-hcCC
Confidence 1238999999999999999999999999999999999999999999999764 8999999 9997
Q ss_pred cccccCCCCcEEEEEEecCCCccchhhheeeeccCCCchhheeeeEEEEEeecCCceEEeEeEEEEecCCCcceeHHHHH
Q psy14046 332 YRKNIVRPDEVLRAIYIPHTAETQYFKAYKQARRRDDDIAIVNAAFNVTLDIQSDGAVVKDCEFAFGGMAPTTVLAKKTT 411 (857)
Q Consensus 332 ~~~t~L~~~EiI~~I~iP~~~~~~~~~~~K~~~R~~~d~a~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E 411 (857)
.++|||++|.||.+. ..+.+||+. |+.+|+|+||+|+.++++ + .+||+|||++++|+|+.++|
T Consensus 144 ------~~~Eil~~I~iP~~~--~~~~~~K~~-r~~~~~a~v~~A~~~~~~---~-----~~ria~Ggv~~~p~r~~~~E 206 (258)
T PRK09799 144 ------PCDRLLTEIIIPDPY--RTCATRKIS-RSQAGLTVVTAAVALTDH---D-----GMRIALDGVASKPLRLHDVE 206 (258)
T ss_pred ------CCCcEEEEEEcCCCC--CcceEEEec-ccccChhhheeEEEEEEc---C-----CeEEEEECCCCcccchHHHh
Confidence 379999999999764 345577885 889999999999998874 2 48999999999999999999
Q ss_pred HHHhCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy14046 412 EQMINKPWNQSLLEDTWRNLMADLPLDHSAPGGMIQYRRSLTLSLFYKFYIAVSVD 467 (857)
Q Consensus 412 ~~L~Gk~~~~~~l~~a~~~l~~~i~~p~~d~~gs~~YRr~la~~ll~r~l~~~~~~ 467 (857)
+ +.++++++.++ +.+++. |.+|.++|++||++++.+|+.|+|.++.+.
T Consensus 207 ~----~~~~~~~~~~a---~~~~~~-p~~d~~~s~~YR~~~~~~l~~r~l~~~~~~ 254 (258)
T PRK09799 207 K----QNLEGNALEQA---VANAIF-PQEDLRGSVAYKRYIAGVLVADLYADCQQA 254 (258)
T ss_pred c----CCCCHHHHHHH---HHhcCC-CCccCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8 78999888876 447777 888999999999999999999999998763
No 21
>TIGR03312 Se_sel_red_FAD probable selenate reductase, FAD-binding subunit. This protein is suggested by Bebien, et al., to be the FAD-binding subunit of a molydbopterin-containing selenate reductase. Our comparative genomics suggests it to be a subunit of a selenium-dependent molybdenum hydroxylase for an unknown substrate.
Probab=100.00 E-value=7.7e-50 Score=425.33 Aligned_cols=249 Identities=21% Similarity=0.316 Sum_probs=220.6
Q ss_pred EEEccCCHHHHHHHHHhCC-CCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEcccccHHHHHHHHH
Q psy14046 173 TWYRPQTLTQLLELKAKFP-EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGATSLNDMRAILS 251 (857)
Q Consensus 173 ~~~~P~sl~eal~ll~~~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l~ 251 (857)
+||+|+|++||+++|++++ +++++||||||++.++ ...++.+|||++| ||++|+.++++|+|||+|||++|+++.
T Consensus 3 ~y~~P~sl~Ea~~ll~~~~~~a~~lAGGTdL~~~~~--~~~~~~lIdl~~i-eL~~I~~~~~~l~IGA~~t~~~l~~~~- 78 (257)
T TIGR03312 3 QFFRPESTIQALELKKRHTGVAVWFAGGSKLNATPT--RTDKKVAISLDKL-ALDKIELQGGALHIGAMCHLQSLIDNE- 78 (257)
T ss_pred ceECCCCHHHHHHHHHhCCCCCEEEecCcchhhhhc--ccCCCEEEEcCCC-CCCcEEecCCEEEEEeCCcHHHHHhCc-
Confidence 6999999999999999985 6999999999987654 4456789999999 999999999999999999999998762
Q ss_pred HHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccCCCCCHHHHHhhcCcEEEEEEcCCCeEEEEcccccccc
Q psy14046 252 EQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGSPISDMNPILMAARCRLLLESKAEGTREVTMDGSFYTS 331 (857)
Q Consensus 252 ~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~asp~sDl~p~LlAldA~v~l~s~~~G~R~vpl~e~F~~g 331 (857)
. ..+.|.++++.||++||||+||||||||+++|+||++|+|+||||+|+|.+. |+||++| ||.|
T Consensus 79 --------~---~~~~L~~aa~~va~~qIRN~gTlGGNl~~a~p~~D~~~~LlaldA~v~l~~~----r~vp~~d-F~~g 142 (257)
T TIGR03312 79 --------L---TPAALKEALGFVYSRHIRNQATIGGEIAAFQSESLLLPVLLALKATVVLANA----SQMDIED-YLAS 142 (257)
T ss_pred --------c---hHHHHHHHHHHhCCHHHhccccHHHHhhcCCCchHHHHHHHHcCCEEEEecC----cEEeHHH-hcCC
Confidence 1 1227999999999999999999999999999999999999999999999765 8999999 9998
Q ss_pred cccccCCCCcEEEEEEecCCCccchhhheeeeccCCCchhheeeeEEEEEeecCCceEEeEeEEEEecCCCcceeHHHHH
Q psy14046 332 YRKNIVRPDEVLRAIYIPHTAETQYFKAYKQARRRDDDIAIVNAAFNVTLDIQSDGAVVKDCEFAFGGMAPTTVLAKKTT 411 (857)
Q Consensus 332 ~~~t~L~~~EiI~~I~iP~~~~~~~~~~~K~~~R~~~d~a~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E 411 (857)
+ ++|||++|+||.+. ..+.++|+ .|+.+|||+|++|+.++++ + ++||++||++++|+|+.++|
T Consensus 143 ~------~~Ell~~V~iP~~~--~~~~~~k~-~R~~~~~a~v~~A~~~~~~---~-----~~ria~ggv~~~p~r~~~~E 205 (257)
T TIGR03312 143 E------QRELIVEVIIPNPN--LMCATRNI-SRSAAGLAVVTAAVAVDQK---G-----NMRIALDGVSPVPVRLRDVE 205 (257)
T ss_pred C------CCcEEEEEEcCCCC--CCceEEEe-cCcccchhhheeEEEEEec---C-----CEEEEEEccCCceeehHHHh
Confidence 4 69999999999764 34556788 7999999999999998764 2 48999999999999999999
Q ss_pred HHHhCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc
Q psy14046 412 EQMINKPWNQSLLEDTWRNLMADLPLDHSAPGGMIQYRRSLTLSLFYKFYIAVSV 466 (857)
Q Consensus 412 ~~L~Gk~~~~~~l~~a~~~l~~~i~~p~~d~~gs~~YRr~la~~ll~r~l~~~~~ 466 (857)
+. .++++.++++ +.+++. |.+|.++|++|||+|+.+|++|++.++.+
T Consensus 206 ~~----~~~~~~~~~~---~~~~~~-p~~D~r~sa~YRr~~~~~l~~r~l~~~~~ 252 (257)
T TIGR03312 206 AQ----DLKGEALEQA---VADAIH-PVADLCGSVAYKRYIAGVVVADLLAECQQ 252 (257)
T ss_pred hC----cCCHHHHHHH---HHhcCC-CCCCCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 85 5777777654 567888 89999999999999999999999998765
No 22
>COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]
Probab=100.00 E-value=1.5e-45 Score=444.08 Aligned_cols=309 Identities=27% Similarity=0.414 Sum_probs=273.5
Q ss_pred CCCCCccccccccccCccceecccCcCCCCCcEEEEEEeCCCCCeEEecCCchhhhhCCCeEEEEecCCCCC-CCCCCCc
Q psy14046 537 DLVGRPIVHASAFKQATGEAIYCDDIPKYQTELYLAFVVSSKPHAKILSVDPSAALAMEGVRGWVDERDVPG-QKNYVGG 615 (857)
Q Consensus 537 ~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~vvt~~Dip~-~~~~~g~ 615 (857)
..+|+++.|.|+..+|||.++|++|+ .+|||+|++|||||++|++|++||.++|+++|||++|+|++|+|. .+ ....
T Consensus 4 ~~~gr~~~R~~~~~~vtG~~~y~~d~-~~~~~~~~~~vrs~~a~a~i~~id~~ea~~~~gv~av~ta~~l~~~~~-~~~~ 81 (731)
T COG1529 4 EIIGRSVLRADGLGKVTGKGRYADDI-VAPGMLYAAFVRSPYAHARIVSIDVSEAQGLPGVLAVITAEELPAWSP-VRVE 81 (731)
T ss_pred ccCCCCcccccchhheeeeeheehhh-cCCCCceEEEEeccCCceEEEEechHHHhhCCCeEEEechhhCccccc-cccc
Confidence 56899999999999999999999999 899999999999999999999999999999999999999999984 33 1111
Q ss_pred cccccccccCCeEeecCCeEEEEEECCHHHHHHHhccceeEEeeCCCCCCHHHHHhcCC--CCCC--CCccccCCChhhh
Q psy14046 616 IIHDDVIFARDVVTCVGQPIGGVIAEDQLIAQRAAALVKVTYEELPAIFSIQEAIEHKS--FFNL--EPSVYGRGNVDEE 691 (857)
Q Consensus 616 ~~~d~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~v~V~ye~lp~v~~~~~Al~~~~--~~~~--~~~~~~~Gd~~~a 691 (857)
.....++|+.++|+|.||||++|+|+|+++|++|+++|.|+|+++|++.++++|+.++. +|+. .......||.+ +
T Consensus 82 ~~p~~~~l~~~~v~~~G~~vA~vva~d~~~A~~aa~~v~V~ye~l~~~v~~~~a~~~~~~~ih~~~n~~~~~~~g~~~-a 160 (731)
T COG1529 82 LAPADEVLARGKVRYTGEPVAAVVAEDEYQARAAAELVLVEYEALPPVVDPEEALAEDAPVIHDELNIARDATFGDDD-A 160 (731)
T ss_pred cCCcchhhccCceEEeCCeEEEEEeCCHHHHHHHHhhceeeeccCCCcCCHHHHhcCCCcccccccccccccccccch-h
Confidence 12222278999999999999999999999999999999999999999999999999876 3442 13445677888 9
Q ss_pred hhcCceeEEEEEEeCcccCCCCCCCceEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCCEEEEecccCCCCCCCC
Q psy14046 692 FLKVDHILEGEVSVGGQEHFYLETNVSVAVPKLEDGCMEIFVSSQHPSEIQEMTAHALGVPSNRIVAKTKRLGGGFGGKE 771 (857)
Q Consensus 692 ~~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~~~l~v~~stQ~p~~~~~~vA~~Lglp~~~V~V~~~~~GGgFGgK~ 771 (857)
|++|+++++.+|.++.+.|.+|||++++++|+ ++++|++|++||+|+.++..++++|++|+++|+|+.+++|||||+|.
T Consensus 161 ~a~A~~~v~~~~~~~~~~~~~~E~~g~~a~~~-d~~~lt~~~~tQ~~~~~~~~l~~~l~~p~~~vrvi~~dvGggfG~K~ 239 (731)
T COG1529 161 FAAAAVVVEAPYKTPRKDPNPMEPHGVVAVPD-DGDKLTVWASTQIPHRLRGMLAAVLGIPPSKVRVISPDVGGGFGSKG 239 (731)
T ss_pred hhcCcEEeeeeeeccCcCccCcccccceeeEc-CCCeEEEEEccCCchHHHHHHHHHhCCCHHHeEEecCCCCcccCCcc
Confidence 99999999999999999999999999999996 45699999999999999999999999999999999999999999998
Q ss_pred CCCccc------------------------------------------c-CeEE--------------------------
Q psy14046 772 KLQSEL------------------------------------------Y-GLFT-------------------------- 782 (857)
Q Consensus 772 ~~~~~~------------------------------------------y-G~i~-------------------------- 782 (857)
...... + |+|+
T Consensus 240 ~~~~~~~~~~~aa~~~grpVk~~~tR~e~~~~~~~~~~~~~~~~~~a~~dg~l~~~~~~~~~~~Gay~~~~~~~~~~~~~ 319 (731)
T COG1529 240 VVYVEEILAALAAVVAGRPVKWIETREELFVATGHRRATLIDVKLGADKDGRLLAIKGTVAADTGAYNGPTVPAAAAGLA 319 (731)
T ss_pred cceeHHHHHHHHHHhcCCCeEEecchHHhhhccCCCCCceEEeeeecCcCCcEEeeeeeEEecCCCccccchhHHHHHhc
Confidence 766422 0 4443
Q ss_pred ------------------------EEe-----hhHHHHHHHHHHHHHHcCCCHHHHHHhcCCcCCCccccccccCCCcHH
Q psy14046 783 ------------------------EVR-----EDDWIAETMGHHVAQFLKLDYADFARSNLFVTGNLTHYNQVLEHCTLG 833 (857)
Q Consensus 783 ------------------------~~r-----q~~~a~E~~id~iA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~~~ 833 (857)
.+| +++|+.|++||++|++|||||+|||++|+++.|... ++..+++.++.
T Consensus 320 ~g~Y~i~~~~~~~~~v~tn~~p~~~~Rg~g~~~~~~a~E~~~d~lA~~Lgidp~eiR~~n~~~~g~~~-~~~~~~~~~~~ 398 (731)
T COG1529 320 RGPYKIEAVYIEPYLVHTNMPPNGAYRGAGRPEGTFALERAVDELAEELGIDPVEIRLRNLIRGGPFG-LGRRYDSGDYL 398 (731)
T ss_pred CCceecccceeeeEEEEcCCCCCcccccCCCchhHHHHHHHHHHHHHHhCCCHHHHhhhhccccCCCC-CcccccCccHH
Confidence 122 999999999999999999999999999999887766 88899999999
Q ss_pred HHHHHHHHhCCChhHHH
Q psy14046 834 RCFEQVHESGKYKERRK 850 (857)
Q Consensus 834 ~~l~~~~~~~~~~~r~~ 850 (857)
+|+++++++++|.+|..
T Consensus 399 ~~~~~~ak~~~~~~~~~ 415 (731)
T COG1529 399 EELDEAAKRFGWSERPV 415 (731)
T ss_pred HHHHHHHHhcCcccccC
Confidence 99999999999976543
No 23
>PF00941 FAD_binding_5: FAD binding domain in molybdopterin dehydrogenase; InterPro: IPR002346 Oxidoreductases, that also bind molybdopterin, have essentially no similarity outside this common domain. They include aldehyde oxidase (1.2.3.1 from EC), that converts an aldehyde and water to an acid and hydrogen peroxide, and xanthine dehydrogenase (1.1.1.204 from EC), that converts xanthine to urate. These enzymes require molybdopterin and FAD as cofactors and have and two 2FE-2S clusters. Another enzyme that contains this domain is the Pseudomonas thermocarboxydovorans carbon monoxide oxygenase.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2E1Q_C 2CKJ_A 3EUB_K 3NS1_K 3NVV_B 1FO4_B 3AM9_A 3AX7_B 3BDJ_A 3ETR_B ....
Probab=100.00 E-value=3.1e-42 Score=346.28 Aligned_cols=170 Identities=35% Similarity=0.584 Sum_probs=151.5
Q ss_pred CcEEEccCCHHHHHHHHHhCCCCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEcccccHHHHHHHH
Q psy14046 171 RATWYRPQTLTQLLELKAKFPEAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGATSLNDMRAIL 250 (857)
Q Consensus 171 ~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l 250 (857)
+|+|++|+|++||+++++.+++++++||||+++++++.+...++.+|||++|+||++|+.++++|+|||+||+++++++.
T Consensus 2 ~~~~~~P~sl~ea~~ll~~~~~a~~vaGgT~l~~~~~~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vtl~~l~~~~ 81 (171)
T PF00941_consen 2 PFEYFRPKSLEEALELLAKGPDARIVAGGTDLGVQMREGILSPDVLIDLSRIPELNGISEDDGGLRIGAAVTLSELEESP 81 (171)
T ss_dssp S-EEEE-SSHHHHHHHHHHGTTEEEESS-TTHHHHHHTTS---SEEEEGTTSGGGG-EEEETSEEEEETTSBHHHHHHHH
T ss_pred CeEEEccCCHHHHHHHHhcCCCCEEEeCCCccchhcccCccccceEEEeEEecccccEEEeccEEEECCCccHHHHhhcc
Confidence 68999999999999999988999999999999999999888899999999999999999999999999999999999882
Q ss_pred HHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccCCCCCHHHHHhhcCcEEEEEEcCCCeEEEEccccccc
Q psy14046 251 SEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGSPISDMNPILMAARCRLLLESKAEGTREVTMDGSFYT 330 (857)
Q Consensus 251 ~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~asp~sDl~p~LlAldA~v~l~s~~~G~R~vpl~e~F~~ 330 (857)
...+.+|.|++++++||++||||+||||||||+++|.||++|+|+||||+|++.+. +|+|++|++| ||.
T Consensus 82 ---------~~~~~~p~L~~~~~~ias~~IRn~aTiGGNl~~~~~~sD~~~~Llal~A~v~i~~~-~g~r~~~~~~-f~~ 150 (171)
T PF00941_consen 82 ---------LIQQYFPALAQAARRIASPQIRNRATIGGNLCNASPASDLAPALLALDARVEIASP-DGTRTVPLED-FFT 150 (171)
T ss_dssp ---------HHHHHHHHHHHHHCTSS-HHHHTT-BHHHHHHHTBTT-SHHHHHHHTT-EEEEEET-TEEEEEEGGG-GEE
T ss_pred ---------hhhhhHHHHHHHHHHhCCHhHeeeeeeccccccCcccccHHHHHHHhCcEEEEEcC-CeeEEEEHHH-hcC
Confidence 34578999999999999999999999999999999999999999999999999999 8999999999 999
Q ss_pred ccccccCCCCcEEEEEEecCC
Q psy14046 331 SYRKNIVRPDEVLRAIYIPHT 351 (857)
Q Consensus 331 g~~~t~L~~~EiI~~I~iP~~ 351 (857)
|++++.|+++|||++|+||.+
T Consensus 151 g~~~~~l~~~eli~~I~iP~~ 171 (171)
T PF00941_consen 151 GPRKTDLEPGELITSIRIPKP 171 (171)
T ss_dssp CTTEESS-TTEEEEEEEEES-
T ss_pred ccccccCCCCcEEEEEECCCC
Confidence 999999999999999999975
No 24
>PF02738 Ald_Xan_dh_C2: Molybdopterin-binding domain of aldehyde dehydrogenase; InterPro: IPR008274 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3NVZ_C 3NVY_C 1FO4_B 3NRZ_L 3AM9_A 3B9J_C 3AX7_B 3NVW_L 3BDJ_A 3ETR_N ....
Probab=100.00 E-value=1e-32 Score=325.68 Aligned_cols=176 Identities=29% Similarity=0.477 Sum_probs=142.4
Q ss_pred CccccCCChhhhhhcCceeEEEEEEeCcccCCCCCCCceEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCCEEEE
Q psy14046 680 PSVYGRGNVDEEFLKVDHILEGEVSVGGQEHFYLETNVSVAVPKLEDGCMEIFVSSQHPSEIQEMTAHALGVPSNRIVAK 759 (857)
Q Consensus 680 ~~~~~~Gd~~~a~~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~~~l~v~~stQ~p~~~~~~vA~~Lglp~~~V~V~ 759 (857)
......||++++|++|+++||++|++++|+|++|||++|+|+|+ ++|+|+||+|||+|+.+|..||++||||++||+|+
T Consensus 15 ~~~~~~GDve~af~~a~~vve~~y~~~~~~h~~mEp~~~~A~~~-~~g~l~v~~~tQ~p~~~r~~va~~lglp~~~V~V~ 93 (547)
T PF02738_consen 15 ERHIERGDVEAAFAEADHVVEAEYRTPRQAHAPMEPHGAVAWWD-EDGRLTVWSSTQWPFHVRRAVAEALGLPPEKVRVI 93 (547)
T ss_dssp EEEEEESSHHHHHHHTSEEEEEEEEE-BB----SS-SEEEEEEE-TTTEEEEEES-SSHHHHHHHHHHHHTS-GGGEEEE
T ss_pred ccccccCCHHHHHhhCCEEEEEEEEECCccccCCCCCeEEEEEc-cCCCEEEEECCcCHhHHHHHHhhhhcCChhHEEEe
Confidence 34578999999999999999999999999999999999999996 78999999999999999999999999999999999
Q ss_pred ecccCCCCC-CCCCCCccc-----------------------------------c-------CeEE--------------
Q psy14046 760 TKRLGGGFG-GKEKLQSEL-----------------------------------Y-------GLFT-------------- 782 (857)
Q Consensus 760 ~~~~GGgFG-gK~~~~~~~-----------------------------------y-------G~i~-------------- 782 (857)
.+++||||| ++......+ + |+|+
T Consensus 94 ~~~~GGgFG~~~~~~~~~~~aa~~a~~~grPVk~~~tR~e~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~Ga~~ 173 (547)
T PF02738_consen 94 SPYVGGGFGKKKQDSPIAVLAALAAKKTGRPVKLVWTREEDFRAGPKRPPTRIRVRAGADKDGKITALDHDIYADGGAYA 173 (547)
T ss_dssp ESB-S--TTTTSSTHHHHHHHHHHHHHHSSEEEEE--HHHHHHHS-BB-EEEEEEEEEE-TTS-EEEEEEEEEEEEESS-
T ss_pred eeecCCCCCCccccchHHHHHHHHHhccCceEEEEechHHhcCCCCCccHHHhhhhheECCCCCEEEeeeeeeccCCccc
Confidence 999999999 443322111 0 7776
Q ss_pred ---------------------EEe----------------------hhHHHHHHHHHHHHHHcCCCHHHHHHhcCCcCCC
Q psy14046 783 ---------------------EVR----------------------EDDWIAETMGHHVAQFLKLDYADFARSNLFVTGN 819 (857)
Q Consensus 783 ---------------------~~r----------------------q~~~a~E~~id~iA~~lg~DP~e~R~~Nl~~~g~ 819 (857)
|+| |+.|++|++||++|+++|+||+|||++|+.++++
T Consensus 174 ~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~g~~Rg~G~~q~~fa~E~~~DelA~~lg~DP~e~R~~N~~~~~~ 253 (547)
T PF02738_consen 174 SFSPAVAPRAGAGADGPYRIPNVRIDARAVYTNTPPAGAFRGFGAPQAAFALESFMDELAEKLGMDPLEFRLKNLIDPGD 253 (547)
T ss_dssp TTHHHHHHHHHHTTTTTB--SEEEEEEEEEE-SSSSBE-STTTTHHHHHHHHHHHHHHHHHHHTS-HHHHHHHHB-GTTE
T ss_pred cccccchhhhhcccCCCcccccEEEEEEeccCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHhCcChHHHHHhccccccc
Confidence 222 9999999999999999999999999999999999
Q ss_pred ccccccccCCCcHHH-HHHHHHHhCCChhHHHHHHhhc
Q psy14046 820 LTHYNQVLEHCTLGR-CFEQVHESGKYKERRKQCEEFN 856 (857)
Q Consensus 820 ~~~~g~~~~~~~~~~-~l~~~~~~~~~~~r~~~~~~fN 856 (857)
.+++|+.++++++.+ ||+++++.++|.+|+++++.||
T Consensus 254 ~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 291 (547)
T PF02738_consen 254 RTPTGQPYDSGDYPEDCLEKAAEHSGWRRRQKEVREFG 291 (547)
T ss_dssp B-TTS-BETS--HHHHHHHHHHHHHCHHHHHHHHHHCC
T ss_pred ccccCcccccCcHHHHHHHHHHhhhchhhhhhHHhhcc
Confidence 999999999999998 9999999999999999988876
No 25
>PF01799 Fer2_2: [2Fe-2S] binding domain; InterPro: IPR002888 The [2Fe-2S] binding domain is found in a range of enzymes including dehydrogenases, oxidases and oxidoreductases. The aldehyde oxido-reductase (Mop) from the sulphate reducing anaerobic Gram-negative bacterium Desulfovibrio gigas is a homodimer of 907 amino acid residues subunits and is a member of the xanthine oxidase family. The protein contains a molybdopterin cofactor (Mo-co) and two different [2Fe-2S] centres. It is folded into four domains of which the first two bind the iron sulphur centres and the last two are involved in Mo-co binding. Mo-co is a molybdenum molybdopterin cytosine dinucleotide. Molybdopterin forms a tricyclic system with the pterin bicycle annealed to a pyran ring. The molybdopterin dinucleotide is deeply buried in the protein. The cis-dithiolene group of the pyran ring binds the molybdenum, which is coordinated by three more (oxygen) ligands [].; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 2E3T_A 1WYG_A 3AN1_B 2E1Q_C 2CKJ_A 3B9J_I 3NVY_J 1FO4_B 3NRZ_J 3AM9_A ....
Probab=99.97 E-value=1.4e-32 Score=235.41 Aligned_cols=75 Identities=55% Similarity=1.086 Sum_probs=64.3
Q ss_pred EcCcCCCCCCCCcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHhCCCCCCHHHHHHHHhCCcccCCCChhHHHHHHH
Q psy14046 8 TVEGIGSTKTKLHPVQERLAKAHGSQCGFCTPGIVMSMYALLRSLPGKPTMKDMEVALQGNLCRCTGYRPILEGFKT 84 (857)
Q Consensus 8 Tveg~~~~~~~~~~iq~~~~~~~~~qCGfCtpg~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCrCtgy~~i~~a~~~ 84 (857)
|||||++ ++.+||||++|+++|++|||||||||||++++||++++. |+++||+++|+|||||||||++|++|++.
T Consensus 1 TvEGl~~-~~~~~~iq~af~~~~a~QCGfCtpG~im~~~~ll~~~~~-p~~~ei~~al~gnlCRCTgY~~I~~Av~~ 75 (75)
T PF01799_consen 1 TVEGLAS-DGELHPIQQAFVEHGAVQCGFCTPGMIMAAYALLRRNPD-PTEEEIREALSGNLCRCTGYRPIVEAVRQ 75 (75)
T ss_dssp -GGGSSB-TTB--HHHHHHHHTT--SSSSSHHHHHHHHHHHHHHSSS--CHHHHHHHTTTS--SSSTSHHHHHHHH-
T ss_pred CcCcCCC-CCCcCHHHHHHHHhCCCcCCcchHHHHHHHHHHhhcccc-hhhHHHHHHHHcCccCCCCcHHHHHHHhC
Confidence 8999987 789999999999999999999999999999999999998 99999999999999999999999999973
No 26
>TIGR03193 4hydroxCoAred 4-hydroxybenzoyl-CoA reductase, gamma subunit. 4-hydroxybenzoyl-CoA reductase converts 4-hydroxybenzoyl-CoA to benzoyl-CoA, a common intermediate in the degradation of aromatic compounds. This protein family represents the gamma chain of this three-subunit enzyme.
Probab=99.97 E-value=2.9e-32 Score=261.93 Aligned_cols=84 Identities=44% Similarity=0.867 Sum_probs=80.0
Q ss_pred CCCceEEEcCcCCCCCCCCcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHhCCCCCCHHHHHHHHhCCcccCCCChhHHH
Q psy14046 1 MHGLAVTTVEGIGSTKTKLHPVQERLAKAHGSQCGFCTPGIVMSMYALLRSLPGKPTMKDMEVALQGNLCRCTGYRPILE 80 (857)
Q Consensus 1 ~~g~~i~Tveg~~~~~~~~~~iq~~~~~~~~~qCGfCtpg~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCrCtgy~~i~~ 80 (857)
++|++|+|||||++ .+.+||||++|+++|++|||||||||||++++||+++|. |+++||+++|+|||||||||++|++
T Consensus 65 ~~G~~V~TiEgl~~-~~~l~pvq~af~~~~a~QCGfCtPG~vms~~~ll~~~p~-ps~~ei~~al~GnLCRCTGY~~I~~ 142 (148)
T TIGR03193 65 VAGRKVETVEGLAT-NGRLSRLQQAFHERLGTQCGFCTPGMIMAAEALLRRNPS-PSRDEIRAALAGNLCRCTGYVKIIE 142 (148)
T ss_pred cCCCcEEEeCCCCC-CCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHcCCC-CCHHHHHHHHcCCccCCCCCHHHHH
Confidence 58999999999986 568999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHH
Q psy14046 81 GFKTFT 86 (857)
Q Consensus 81 a~~~~~ 86 (857)
|++.++
T Consensus 143 Av~~aa 148 (148)
T TIGR03193 143 SVEAAA 148 (148)
T ss_pred HHHHhC
Confidence 998753
No 27
>TIGR03198 pucE xanthine dehydrogenase E subunit. This gene has been characterized in B. subtilis as the Iron-sulfur cluster binding-subunit of xanthine dehydrogenase (pucE), acting in conjunction with pucC, the FAD-binding subunit and pucD, the molybdopterin binding subunit. The more common XDH complex (GenProp0640) includes the xdhA gene as the Fe-S cluster binding component.
Probab=99.97 E-value=8.7e-32 Score=260.82 Aligned_cols=84 Identities=44% Similarity=0.854 Sum_probs=79.9
Q ss_pred CCCceEEEcCcCCCCCCCCcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHhCCCCCCHHHHHHHHhCCcccCCCChhHHH
Q psy14046 1 MHGLAVTTVEGIGSTKTKLHPVQERLAKAHGSQCGFCTPGIVMSMYALLRSLPGKPTMKDMEVALQGNLCRCTGYRPILE 80 (857)
Q Consensus 1 ~~g~~i~Tveg~~~~~~~~~~iq~~~~~~~~~qCGfCtpg~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCrCtgy~~i~~ 80 (857)
++|++|+|||||+. +.+||||+||+++|++|||||||||||++++||+++|. ||++||+++|+|||||||||++|++
T Consensus 67 ~~G~~v~TiEgl~~--~~l~pvQ~af~~~~a~QCGfCtpG~im~~~~ll~~~p~-p~~~ei~~al~gnlCRCtgY~~I~~ 143 (151)
T TIGR03198 67 ADGHEITTIEGIAE--NELDPCQTAFLEEGGFQCGYCTPGMVVALKALFRETPQ-PSDEDMEEGLSGNLCRCTGYGGIIR 143 (151)
T ss_pred hcCCEEEecCCcCC--CCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHcCCC-CCHHHHHHHHcCCCcCCCCCHHHHH
Confidence 58999999999964 57999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHH
Q psy14046 81 GFKTFTE 87 (857)
Q Consensus 81 a~~~~~~ 87 (857)
|++++++
T Consensus 144 Av~~~~~ 150 (151)
T TIGR03198 144 SACRIRR 150 (151)
T ss_pred HHHHHhc
Confidence 9998764
No 28
>PRK09908 xanthine dehydrogenase subunit XdhC; Provisional
Probab=99.97 E-value=2.7e-31 Score=257.78 Aligned_cols=86 Identities=38% Similarity=0.684 Sum_probs=79.3
Q ss_pred CCCceEEEcCcCCCCCCCCcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHhCC-CCCCHHHHHHHHhCCcccCCCChhHH
Q psy14046 1 MHGLAVTTVEGIGSTKTKLHPVQERLAKAHGSQCGFCTPGIVMSMYALLRSLP-GKPTMKDMEVALQGNLCRCTGYRPIL 79 (857)
Q Consensus 1 ~~g~~i~Tveg~~~~~~~~~~iq~~~~~~~~~qCGfCtpg~v~~~~~ll~~~~-~~~~~~~i~~~l~gnlCrCtgy~~i~ 79 (857)
++|++|+|||||++ .+.+||||+||+++|++|||||||||||++++||+++| .+|+++||+++|+|||||||||++|+
T Consensus 71 ~~G~~V~TiEGl~~-~~~l~pvQ~Af~~~~a~QCGyCtPG~ims~~aLl~~~~~~~~s~~eI~~al~GNlCRCTGY~~I~ 149 (159)
T PRK09908 71 AEGKEIRTLEGEAK-GGKLSHVQQAYAKSGAVQCGFCTPGLIMATTAMLAKPREKPLTITEIRRGLAGNLCRCTGYQMIV 149 (159)
T ss_pred hCCCEEEeecCCCC-CCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHcCCCCCCCHHHHHHHHcCCccCCCCCHHHH
Confidence 58999999999987 56899999999999999999999999999999999986 32699999999999999999999999
Q ss_pred HHHHHHHH
Q psy14046 80 EGFKTFTE 87 (857)
Q Consensus 80 ~a~~~~~~ 87 (857)
+|++.+.+
T Consensus 150 ~Av~~~~~ 157 (159)
T PRK09908 150 NTVLDCEK 157 (159)
T ss_pred HHHHHHhh
Confidence 99987643
No 29
>COG2080 CoxS Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]
Probab=99.96 E-value=1.9e-30 Score=248.70 Aligned_cols=87 Identities=44% Similarity=0.813 Sum_probs=82.4
Q ss_pred CCCceEEEcCcCCCCCCCCcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHhCCCCCCHHHHHHHHhCCcccCCCChhHHH
Q psy14046 1 MHGLAVTTVEGIGSTKTKLHPVQERLAKAHGSQCGFCTPGIVMSMYALLRSLPGKPTMKDMEVALQGNLCRCTGYRPILE 80 (857)
Q Consensus 1 ~~g~~i~Tveg~~~~~~~~~~iq~~~~~~~~~qCGfCtpg~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCrCtgy~~i~~ 80 (857)
++|++|||||||+..+..|||+|+||+++++.|||||||||||++++||+++|. ||++||+++|+||+||||||..|++
T Consensus 67 ~~G~~ItTiEGl~~~~~~l~~vQ~Af~e~~~~QCGyCtpG~Imsa~~lL~~~~~-ps~~eI~~~lsGnlCRCt~Y~~I~~ 145 (156)
T COG2080 67 AEGAEITTIEGLAKKDGGLHPVQQAFLEHDAFQCGYCTPGQIMSATALLDRNPA-PTDEEIREALSGNLCRCTGYQNIVA 145 (156)
T ss_pred hCCCeEEEeecccCCCCCcCHHHHHHHHcCCCcCCCCcHHHHHHHHHHHHhCCC-CCHHHHHHHHhcCccccCCHHHHHH
Confidence 479999999999954677899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHh
Q psy14046 81 GFKTFTEE 88 (857)
Q Consensus 81 a~~~~~~~ 88 (857)
|++.++..
T Consensus 146 Ai~~aa~~ 153 (156)
T COG2080 146 AILDAAER 153 (156)
T ss_pred HHHHHHHH
Confidence 99988754
No 30
>PRK11433 aldehyde oxidoreductase 2Fe-2S subunit; Provisional
Probab=99.96 E-value=3.5e-30 Score=261.54 Aligned_cols=86 Identities=41% Similarity=0.814 Sum_probs=80.7
Q ss_pred CCCceEEEcCcCCCCCCCCcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHh---------------CCCCCCHHHHHHHH
Q psy14046 1 MHGLAVTTVEGIGSTKTKLHPVQERLAKAHGSQCGFCTPGIVMSMYALLRS---------------LPGKPTMKDMEVAL 65 (857)
Q Consensus 1 ~~g~~i~Tveg~~~~~~~~~~iq~~~~~~~~~qCGfCtpg~v~~~~~ll~~---------------~~~~~~~~~i~~~l 65 (857)
++|++|+|||||+. .+.+||+|++|+++|++|||||||||||++++||++ +|. ||++||+++|
T Consensus 115 ~~G~~ItTiEGL~~-~~~lhpvQ~Af~~~~a~QCGyCTPG~imsa~alL~~~~~~~~~~~~~~~~~~p~-pt~~eIreal 192 (217)
T PRK11433 115 HQGAEITTIEGLGS-PDNLHPMQAAFVKHDGFQCGYCTPGQICSSVAVLKEIKDGIPSHVTVDLTAAPE-LTADEIRERM 192 (217)
T ss_pred cCCCEEEEeCCcCC-CCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHhccccCccccccccccCCC-CCHHHHHHHH
Confidence 47999999999987 568999999999999999999999999999999998 676 9999999999
Q ss_pred hCCcccCCCChhHHHHHHHHHHh
Q psy14046 66 QGNLCRCTGYRPILEGFKTFTEE 88 (857)
Q Consensus 66 ~gnlCrCtgy~~i~~a~~~~~~~ 88 (857)
+|||||||||++|++|+++++..
T Consensus 193 sGNlCRCtgY~~Iv~Av~~~a~~ 215 (217)
T PRK11433 193 SGNICRCGAYSNILEAIEDVAGE 215 (217)
T ss_pred cCCccCCCCcHHHHHHHHHHHhc
Confidence 99999999999999999988753
No 31
>PF01315 Ald_Xan_dh_C: Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; InterPro: IPR000674 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1N63_E 1N60_B 1ZXI_E 1N5W_E 1N62_B 1N61_E 3AN1_B 2E3T_A 1WYG_A 2W3R_D ....
Probab=99.96 E-value=1.6e-29 Score=235.82 Aligned_cols=107 Identities=51% Similarity=0.685 Sum_probs=91.4
Q ss_pred ccceecccCcCCCCCcEEEEEEeCCCCCeEEecCCchhhhhCCCeEEEEecCCCCCCCCCCC--ccccc--cccccCCeE
Q psy14046 553 TGEAIYCDDIPKYQTELYLAFVVSSKPHAKILSVDPSAALAMEGVRGWVDERDVPGQKNYVG--GIIHD--DVIFARDVV 628 (857)
Q Consensus 553 tG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~vvt~~Dip~~~~~~g--~~~~d--~~~~a~~~V 628 (857)
||+++|++|+ .+|||||+++||||++||+|+|||+++|++||||++|+|++|+|+.| ..+ +...+ +|+|++++|
T Consensus 1 TG~a~Y~~Di-~~~~~l~~~~vrS~~a~a~I~sid~~~A~~~pGV~~v~t~~Dip~~~-~~~~~~~~~~~~~~~la~~~V 78 (111)
T PF01315_consen 1 TGEARYVDDI-PPPGMLYAAFVRSPIAHARIKSIDTSEALAMPGVVAVITAEDIPGIN-PNGGLPIPHDEPQPVLADDKV 78 (111)
T ss_dssp TT-S-BGGGS-CSTTTEEEEEEE-SSSSEEEEEEEGHHHHHSTTEEEEEEGGGHSSGS-EESCSCSTTSSEEESS-SSEE
T ss_pred CcCeEccccc-CCCCCeEEEEEecCcCcEEEEEEecHHHccCCCEEEEEEecccCccc-cCccccccCCCceEeccCCeE
Confidence 8999999999 79999999999999999999999999999999999999999999876 333 23334 579999999
Q ss_pred eecCCeEEEEEECCHHHHHHHhccceeEEeeCC
Q psy14046 629 TCVGQPIGGVIAEDQLIAQRAAALVKVTYEELP 661 (857)
Q Consensus 629 ~y~GqpVa~VvAet~~~A~~Aa~~v~V~ye~lp 661 (857)
+|+||||++|||+|+++|++|+++|+|+||+||
T Consensus 79 ~y~GqpVa~VvAet~~~A~~Aa~~V~V~Ye~lp 111 (111)
T PF01315_consen 79 RYVGQPVALVVAETREAARDAAELVKVEYEELP 111 (111)
T ss_dssp SSTT-EEEEEEESSHHHHHHHHHT-EEEEEE--
T ss_pred eECCCeEEEEEECCHHHHHHHhcCcEEEeEeCC
Confidence 999999999999999999999999999999986
No 32
>PF03450 CO_deh_flav_C: CO dehydrogenase flavoprotein C-terminal domain; InterPro: IPR005107 Proteins containing this domain form structural complexes with other known families, such as IPR008274 from INTERPRO and IPR001041 from INTERPRO]. The carbon monoxide (CO) dehydrogenase of Oligotropha carboxidovorans is a heterotrimeric complex composed of a apoflavoprotein, a molybdoprotein, and an iron-sulphur protein. It can be dissociated with sodium dodecylsulphate []. CO dehydrogenase catalyzes the oxidation of CO according to the following equation []: CO + H2O = CO2 + 2e + 2H+ Subunit S represents the iron-sulphur protein of CO dehydrogenase and is clearly divided into a C- and an N-terminal domain, each binding a [2Fe-2S] cluster [].; PDB: 3EUB_K 3NS1_K 3NVV_B 1FO4_B 3AM9_A 3AX7_B 3BDJ_A 3ETR_B 3UNI_A 3AMZ_A ....
Probab=99.77 E-value=1.7e-18 Score=159.86 Aligned_cols=102 Identities=34% Similarity=0.489 Sum_probs=95.8
Q ss_pred heeeeccCCCchhheeeeEEEEEeecCCceEEeEeEEEEecCCCcceeHHHHHHHHhCCCCCHHHHHHHHHHHhccCCCC
Q psy14046 359 AYKQARRRDDDIAIVNAAFNVTLDIQSDGAVVKDCEFAFGGMAPTTVLAKKTTEQMINKPWNQSLLEDTWRNLMADLPLD 438 (857)
Q Consensus 359 ~~K~~~R~~~d~a~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~~i~~p 438 (857)
+||+.+|.++|+|++|+|+.+.+++ ++ +|+++||++||++++|+|+.++|++|.|++|++++++++.+.+.+++. |
T Consensus 2 ayk~~~R~~~d~a~v~~a~~~~~~~-~~--~i~~~ria~g~v~~~p~r~~~~E~~L~g~~~~~~~~~~~~~~~~~~~~-~ 77 (103)
T PF03450_consen 2 AYKIGRRKANDIAIVNVAVLVSVDD-DG--RIEDARIAVGGVAPTPVRAEEVEAALIGKPLSEETLEEAAEAVSEEID-P 77 (103)
T ss_dssp EEEESSSSSSSSSSEEEEEEEEEET-TS--EEEEEEEEEESSSSSTEE-HHHHHHTTTSBSSHHHHHHHHHHHHHHTH-H
T ss_pred CeeccCccccHHHHHhhhheEEEec-Cc--eEEEEEEEEeccccceeehHHHHHHHhhcchhhhhHHHHHHHHHhcCC-C
Confidence 4699999999999999999999984 55 999999999999999999999999999999999999999999999999 8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHH
Q psy14046 439 HSAPGGMIQYRRSLTLSLFYKFYIAV 464 (857)
Q Consensus 439 ~~d~~gs~~YRr~la~~ll~r~l~~~ 464 (857)
.+|+++|++||++|+.+|++|+|.++
T Consensus 78 ~~d~r~s~~YR~~l~~~l~~ral~~~ 103 (103)
T PF03450_consen 78 ISDMRASAEYRRHLARVLVRRALEEV 103 (103)
T ss_dssp CTTTTBTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 88899999999999999999999874
No 33
>COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]
Probab=98.07 E-value=1.3e-07 Score=115.54 Aligned_cols=199 Identities=13% Similarity=0.019 Sum_probs=127.2
Q ss_pred CCccccCCCC-CccccccccccCccceecccCcCCCCCcEEEEEEeCCCCCeEEecCCchhhhhCCCeEEEEecCCCCCC
Q psy14046 531 STQAKSDLVG-RPIVHASAFKQATGEAIYCDDIPKYQTELYLAFVVSSKPHAKILSVDPSAALAMEGVRGWVDERDVPGQ 609 (857)
Q Consensus 531 ~~~~~~~~iG-~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~vvt~~Dip~~ 609 (857)
+.+....++| ...++ |+. ++|+.+.|..|. .+++||+..+.+++..-.+|.. |...+...++++.+...
T Consensus 177 ~~~~~~E~~g~~a~~~-d~~-~lt~~~~tQ~~~-~~~~~l~~~l~~p~~~vrvi~~-dvGggfG~K~~~~~~~~------ 246 (731)
T COG1529 177 KDPNPMEPHGVVAVPD-DGD-KLTVWASTQIPH-RLRGMLAAVLGIPPSKVRVISP-DVGGGFGSKGVVYVEEI------ 246 (731)
T ss_pred cCccCcccccceeeEc-CCC-eEEEEEccCCch-HHHHHHHHHhCCCHHHeEEecC-CCCcccCCcccceeHHH------
Confidence 3466778899 67788 777 999999999999 9999999999866655555555 87777777766443322
Q ss_pred CCCCCccccccccccCCeEeecCCeEEEEEECCHHHHHHHhccceeEEeeCCC-CCCHHHHHhc-CCCCC-CCCccccCC
Q psy14046 610 KNYVGGIIHDDVIFARDVVTCVGQPIGGVIAEDQLIAQRAAALVKVTYEELPA-IFSIQEAIEH-KSFFN-LEPSVYGRG 686 (857)
Q Consensus 610 ~~~~g~~~~d~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~v~V~ye~lp~-v~~~~~Al~~-~~~~~-~~~~~~~~G 686 (857)
.+-. +++++..++.+....+...+.....++ ..+..-+... +.+.. ......+.|
T Consensus 247 -------------~~~~---------aa~~~grpVk~~~tR~e~~~~~~~~~~~~~~~~~~a~~dg~l~~~~~~~~~~~G 304 (731)
T COG1529 247 -------------LAAL---------AAVVAGRPVKWIETREELFVATGHRRATLIDVKLGADKDGRLLAIKGTVAADTG 304 (731)
T ss_pred -------------HHHH---------HHHhcCCCeEEecchHHhhhccCCCCCceEEeeeecCcCCcEEeeeeeEEecCC
Confidence 1101 233333333333333333333211111 1111111111 11100 001112233
Q ss_pred C-----hhhhh---hcCceeEEEEEEeCcccCCCCCCCceEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCCEEE
Q psy14046 687 N-----VDEEF---LKVDHILEGEVSVGGQEHFYLETNVSVAVPKLEDGCMEIFVSSQHPSEIQEMTAHALGVPSNRIVA 758 (857)
Q Consensus 687 d-----~~~a~---~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~~~l~v~~stQ~p~~~~~~vA~~Lglp~~~V~V 758 (857)
+ +...+ ....+.++..|..++..|..||| ++..... ++. ..||.+...++.+|+.|||++.+||+
T Consensus 305 ay~~~~~~~~~~~~~~g~Y~i~~~~~~~~~v~tn~~p-~~~~Rg~--g~~----~~~~a~E~~~d~lA~~Lgidp~eiR~ 377 (731)
T COG1529 305 AYNGPTVPAAAAGLARGPYKIEAVYIEPYLVHTNMPP-NGAYRGA--GRP----EGTFALERAVDELAEELGIDPVEIRL 377 (731)
T ss_pred CccccchhHHHHHhcCCceecccceeeeEEEEcCCCC-CcccccC--CCc----hhHHHHHHHHHHHHHHhCCCHHHHhh
Confidence 3 33332 23346899999999999999999 6666542 333 88999999999999999999999999
Q ss_pred EecccCCCCC
Q psy14046 759 KTKRLGGGFG 768 (857)
Q Consensus 759 ~~~~~GGgFG 768 (857)
+....+|+||
T Consensus 378 ~n~~~~g~~~ 387 (731)
T COG1529 378 RNLIRGGPFG 387 (731)
T ss_pred hhccccCCCC
Confidence 9999999999
No 34
>PRK14652 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=97.52 E-value=0.00032 Score=77.23 Aligned_cols=160 Identities=15% Similarity=0.242 Sum_probs=104.9
Q ss_pred cceeeecCCcEEEccCCHHHHHHHHHh---CC-CCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEc
Q psy14046 163 EYLQIRGPRATWYRPQTLTQLLELKAK---FP-EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIG 238 (857)
Q Consensus 163 ~~~~~~~~~~~~~~P~sl~eal~ll~~---~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IG 238 (857)
.++.+.+..--|+.|+|.+|+.++++. +. ...++.|||.+.+. .. -.+..+|++++. +..|..+++.+++|
T Consensus 28 tt~~igg~a~~~v~p~~~edl~~~v~~a~~~~ip~~vlGgGSNllv~--d~-g~~gvVI~l~~~--~~~i~~~~~~v~v~ 102 (302)
T PRK14652 28 TAVRVGGPADLLVRPADPDALSALLRAVRELGVPLSILGGGANTLVA--DA-GVRGVVLRLPQD--FPGESTDGGRLVLG 102 (302)
T ss_pred cEeecCCcceEEEEcCCHHHHHHHHHHHHHCCCcEEEEcCCcceeec--CC-CEeeEEEEecCC--cceEEecCCEEEEE
Confidence 567788878889999999999887653 22 36789999998642 11 123578998652 55677777899999
Q ss_pred ccccHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccCC--CCCHHHHHhhcCcEEEEEEcC
Q psy14046 239 GATSLNDMRAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGSP--ISDMNPILMAARCRLLLESKA 316 (857)
Q Consensus 239 A~vTl~~l~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~asp--~sDl~p~LlAldA~v~l~s~~ 316 (857)
|++++.+|...+.+. .+. -+...++.+ |||||++++-.. .+++.=.+. .|++...
T Consensus 103 AG~~~~~L~~~~~~~----------GL~----GlE~l~gIP----GTvGGav~mNaGa~ggei~d~v~----~v~vv~~- 159 (302)
T PRK14652 103 AGAPISRLPARAHAH----------GLV----GMEFLAGIP----GTLGGAVAMNAGTKLGEMKDVVT----AVELATA- 159 (302)
T ss_pred CCCcHHHHHHHHHHc----------CCc----ccccccCCC----cchhHHHHHcCCCCceEhhheEE----EEEEECC-
Confidence 999999999886531 111 122333322 699999975432 123322222 4455556
Q ss_pred CCeEEEEcccccccccccccCCCCcEEEEEEecCC
Q psy14046 317 EGTREVTMDGSFYTSYRKNIVRPDEVLRAIYIPHT 351 (857)
Q Consensus 317 ~G~R~vpl~e~F~~g~~~t~L~~~EiI~~I~iP~~ 351 (857)
+|.++++-++ ..-+||...+..+-||+++.+...
T Consensus 160 ~G~~~~~~~e-~~f~YR~s~~~~~~II~~a~~~L~ 193 (302)
T PRK14652 160 DGAGFVPAAA-LGYAYRTCRLPPGAVITRVEVRLR 193 (302)
T ss_pred CCcEEeehhh-cCcccceeccCCCeEEEEEEEEEe
Confidence 5666777777 666777766655567777776554
No 35
>PRK13905 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.91 E-value=0.0044 Score=68.28 Aligned_cols=161 Identities=16% Similarity=0.220 Sum_probs=101.9
Q ss_pred cceeeecCCcEEEccCCHHHHHHHHHh---CC-CCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEc
Q psy14046 163 EYLQIRGPRATWYRPQTLTQLLELKAK---FP-EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIG 238 (857)
Q Consensus 163 ~~~~~~~~~~~~~~P~sl~eal~ll~~---~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IG 238 (857)
.++.+.+..-.++.|+|.+|+.++++. +. ...++.|||.+.+. .. .....+||+++ .|+.|+.+++.+++|
T Consensus 23 ~t~~igg~a~~vv~P~s~edv~~~v~~a~~~~~p~~v~GgGsnll~~--d~-g~~gvvI~l~~--~l~~i~~~~~~v~v~ 97 (298)
T PRK13905 23 TSFRVGGPADYLVEPADIEDLQEFLKLLKENNIPVTVLGNGSNLLVR--DG-GIRGVVIRLGK--GLNEIEVEGNRITAG 97 (298)
T ss_pred ceeecCceEeEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCceEEec--CC-CcceEEEEecC--CcceEEecCCEEEEE
Confidence 456777766778999999999887653 22 36789999998642 11 12357899873 477777778899999
Q ss_pred ccccHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccc-cCCCC-CHHHHHhhcCcEEEEEEcC
Q psy14046 239 GATSLNDMRAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMT-GSPIS-DMNPILMAARCRLLLESKA 316 (857)
Q Consensus 239 A~vTl~~l~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~-asp~s-Dl~p~LlAldA~v~l~s~~ 316 (857)
|++++.+|.+.+.+. .+. -+...++. -+||||.+++ +...+ ++.=.+ -.|++...
T Consensus 98 aG~~~~~L~~~l~~~----------Gl~----gle~~~gi----pGTVGGai~~NaG~~G~~~~d~v----~~v~vv~~- 154 (298)
T PRK13905 98 AGAPLIKLARFAAEA----------GLS----GLEFAAGI----PGTVGGAVFMNAGAYGGETADVL----ESVEVLDR- 154 (298)
T ss_pred CCCcHHHHHHHHHHc----------CCC----cchhccCC----CcchhHHHHHcCCcCceEhheeE----EEEEEEeC-
Confidence 999999999886531 110 11222222 2688888863 33222 111111 12344445
Q ss_pred CC-eEEEEcccccccccccccCCC-CcEEEEEEecCCC
Q psy14046 317 EG-TREVTMDGSFYTSYRKNIVRP-DEVLRAIYIPHTA 352 (857)
Q Consensus 317 ~G-~R~vpl~e~F~~g~~~t~L~~-~EiI~~I~iP~~~ 352 (857)
+| .++++-+| .+-+|+...+.. ..||+++.+-..+
T Consensus 155 ~G~~~~~~~~e-~~~~yR~s~~~~~~gII~~~~l~l~~ 191 (298)
T PRK13905 155 DGEIKTLSNEE-LGFGYRHSALQEEGLIVLSATFQLEP 191 (298)
T ss_pred CCCEEEEEHHH-cCCcCccccCCCCCEEEEEEEEEEcC
Confidence 44 45666666 777788777653 4588888875543
No 36
>TIGR00179 murB UDP-N-acetylenolpyruvoylglucosamine reductase. This model describes MurB, UDP-N-acetylenolpyruvoylglucosamine reductase, which is also called UDP-N-acetylmuramate dehydrogenase. It is part of the pathway for the biosynthesis of the UDP-N-acetylmuramoyl-pentapeptide that is a precursor of bacterial peptidoglycan.
Probab=96.59 E-value=0.0069 Score=66.28 Aligned_cols=160 Identities=14% Similarity=0.115 Sum_probs=95.6
Q ss_pred cceeeecCCcEEEccCCHHHHHHHHHh---C-CCCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEc
Q psy14046 163 EYLQIRGPRATWYRPQTLTQLLELKAK---F-PEAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIG 238 (857)
Q Consensus 163 ~~~~~~~~~~~~~~P~sl~eal~ll~~---~-~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IG 238 (857)
.++.+.+..--|+.|.|.+|+.++++. + -...+++|||.+.+. .......+|++++.. +.+..+++.+++|
T Consensus 5 tt~~igg~a~~~v~p~s~edl~~~l~~a~~~~~p~~vlGgGSNll~~---d~~~~gvvi~l~~~~--~~~~~~~~~v~v~ 79 (284)
T TIGR00179 5 TTYKIGGNARHIVCPESIEQLVNVLDNAKEEDQPLLILGEGSNLLIL---DDGRGGVIINLGKGI--DIEDDEGEYVHVG 79 (284)
T ss_pred ceeecCceeeEEEEeCCHHHHHHHHHHHHHcCCCEEEEecceEEEEc---cCCcCeEEEECCCCc--eEEEecCCEEEEE
Confidence 346667777789999999999987653 2 246799999999853 112234788886532 2222235689999
Q ss_pred ccccHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccCCCCCHHHHHhhcCcEEEEEEcCCC
Q psy14046 239 GATSLNDMRAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGSPISDMNPILMAARCRLLLESKAEG 318 (857)
Q Consensus 239 A~vTl~~l~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~asp~sDl~p~LlAldA~v~l~s~~~G 318 (857)
|++++.+|.+.+.+. .+. -+...++. -|||||++++-...--.-.-=... .|++... +|
T Consensus 80 aG~~~~~l~~~~~~~----------Gl~----GlE~l~gi----PGtvGGai~mNAGayG~~i~d~l~--~v~vv~~-~G 138 (284)
T TIGR00179 80 GGENWHKLVKYALKN----------GLS----GLEFLAGI----PGTVGGAVIMNAGAYGVEISEVLV--YATILLA-TG 138 (284)
T ss_pred cCCcHHHHHHHHHHC----------CCc----ccccCCCC----CchHHHHHHHhcccchhehhheEE--EEEEEeC-CC
Confidence 999999999886431 111 11222222 148999987543331111110112 2333445 45
Q ss_pred -eEEEEcccccccccccccCCCCc--EEEEEEec
Q psy14046 319 -TREVTMDGSFYTSYRKNIVRPDE--VLRAIYIP 349 (857)
Q Consensus 319 -~R~vpl~e~F~~g~~~t~L~~~E--iI~~I~iP 349 (857)
.+++.-+| .--+||...++... +|++..+.
T Consensus 139 ~~~~~~~~~-~~f~YR~S~f~~~~~~iil~a~~~ 171 (284)
T TIGR00179 139 KTEWLTNEQ-LGFGYRTSIFQHKYVGLVLKAEFQ 171 (284)
T ss_pred CEEEEEHHH-ccccCCccccCCCCcEEEEEEEEE
Confidence 46777777 66678877776543 56655543
No 37
>PRK14650 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.44 E-value=0.028 Score=61.82 Aligned_cols=164 Identities=12% Similarity=0.092 Sum_probs=101.8
Q ss_pred cceeeecCCcEEEccCCHHHHHHHHHhC----CCCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEc
Q psy14046 163 EYLQIRGPRATWYRPQTLTQLLELKAKF----PEAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIG 238 (857)
Q Consensus 163 ~~~~~~~~~~~~~~P~sl~eal~ll~~~----~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IG 238 (857)
.++.+.|..-.|+.|.|.+|+.++++.. -...++.||+-+++. .+......+|.+.. ++.|+.+++.|++|
T Consensus 25 tt~~iGG~A~~~~~p~~~~eL~~~l~~~~~~~~p~~vlG~GSNlLv~--D~g~~~g~vi~~~~---~~~i~~~~~~v~a~ 99 (302)
T PRK14650 25 TTYKIGGISKLFLTPKTIKDAEHIFKAAIEEKIKIFILGGGSNILIN--DEEEIDFPIIYTGH---LNKIEIHDNQIVAE 99 (302)
T ss_pred ceeeeCcEEEEEEecCCHHHHHHHHHHHHHcCCCEEEEeceeEEEEE--CCCccceEEEEECC---cCcEEEeCCEEEEE
Confidence 5688888888899999999998877542 136789999998873 12112345665533 67777777899999
Q ss_pred ccccHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccCCCCCHHHHHhhcCcEEEEEEcCCC
Q psy14046 239 GATSLNDMRAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGSPISDMNPILMAARCRLLLESKAEG 318 (857)
Q Consensus 239 A~vTl~~l~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~asp~sDl~p~LlAldA~v~l~s~~~G 318 (857)
|++++.++.....+. . -.-+-.|+-.=..+|+-.+-|.|+-|+-| +|.. -+|++...+..
T Consensus 100 AG~~~~~l~~~~~~~-----g--l~GlE~l~gIPGTVGGAv~mNAGayG~ei------~d~l-------~sV~~~d~~g~ 159 (302)
T PRK14650 100 CGTNFEDLCKFALQN-----E--LSGLEFIYGLPGTLGGAIWMNARCFGNEI------SEIL-------DKITFIDEKGK 159 (302)
T ss_pred eCCcHHHHHHHHHHc-----C--CchhhhhcCCCcchhHHHHhhCCccccch------heeE-------EEEEEEECCCC
Confidence 999999999875431 0 01111122221233444444444444433 2322 13444554233
Q ss_pred eEEEEcccccccccccccCCC-CcEEEEEEecCCC
Q psy14046 319 TREVTMDGSFYTSYRKNIVRP-DEVLRAIYIPHTA 352 (857)
Q Consensus 319 ~R~vpl~e~F~~g~~~t~L~~-~EiI~~I~iP~~~ 352 (857)
.++++-+| .--+||...++. +.+|+++.+...+
T Consensus 160 ~~~~~~~e-~~f~YR~S~f~~~~~iIl~a~f~L~~ 193 (302)
T PRK14650 160 TICKKFKK-EEFKYKISPFQNKNTFILKATLNLKK 193 (302)
T ss_pred EEEEEHHH-cCcccccccCCCCCEEEEEEEEEEcC
Confidence 56777788 777888888765 4578887775543
No 38
>PRK13906 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.43 E-value=0.021 Score=63.12 Aligned_cols=158 Identities=12% Similarity=0.181 Sum_probs=99.5
Q ss_pred eeeecCCcEEEccCCHHHHHHHHHh---CC-CCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEccc
Q psy14046 165 LQIRGPRATWYRPQTLTQLLELKAK---FP-EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGA 240 (857)
Q Consensus 165 ~~~~~~~~~~~~P~sl~eal~ll~~---~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~ 240 (857)
+.+.|..--|+.|.|.+|+.++++. +. ...++.|||.+.+. .+. ....+|++++ |+.|+.+++.+++||+
T Consensus 31 ~~iGG~A~~~v~p~~~edv~~~v~~a~~~~ip~~vlGgGSNll~~--d~g-~~GvvI~l~~---l~~i~~~~~~v~v~aG 104 (307)
T PRK13906 31 TKTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIR--EGG-IRGIVISLLS---LDHIEVSDDAIIAGSG 104 (307)
T ss_pred cCcCceeEEEEEcCCHHHHHHHHHHHHHcCCCEEEEcCceeEeec--CCC-cceEEEEecC---ccceEEeCCEEEEECC
Confidence 4455656678999999999887653 22 36789999998753 121 2357898765 6777777889999999
Q ss_pred ccHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccC-CCC-CHHHHHhhcCcEEEEEEcCCC
Q psy14046 241 TSLNDMRAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGS-PIS-DMNPILMAARCRLLLESKAEG 318 (857)
Q Consensus 241 vTl~~l~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~as-p~s-Dl~p~LlAldA~v~l~s~~~G 318 (857)
+++.+|.+.+.+. .+..+. ..++ =-|||||++.+-. -.+ ++.=.++ .|++...++.
T Consensus 105 ~~~~~l~~~~~~~----------Gl~GlE----~~~g----IPGtVGGav~mNaGayGg~i~D~l~----~v~vv~~~G~ 162 (307)
T PRK13906 105 AAIIDVSRVARDY----------ALTGLE----FACG----IPGSIGGAVYMNAGAYGGEVKDCID----YALCVNEQGS 162 (307)
T ss_pred CcHHHHHHHHHHc----------CCccch----hhcC----CCccHhHHHHhhCCcchhhhhhhee----EEEEEeCCCC
Confidence 9999999875431 111111 1111 1368888886433 222 2222222 2344444233
Q ss_pred eEEEEcccccccccccccCCCC-cEEEEEEecCC
Q psy14046 319 TREVTMDGSFYTSYRKNIVRPD-EVLRAIYIPHT 351 (857)
Q Consensus 319 ~R~vpl~e~F~~g~~~t~L~~~-EiI~~I~iP~~ 351 (857)
.++++-+| ..-+||...++.+ .+|+++.+-..
T Consensus 163 ~~~~~~~e-~~f~YR~S~~~~~~~ii~~~~~~l~ 195 (307)
T PRK13906 163 LIKLTTKE-LELDYRNSIIQKEHLVVLEAAFTLA 195 (307)
T ss_pred EEEEEHHH-ccCcCCcccCCCCCEEEEEEEEEEC
Confidence 56777777 7778888887754 37777766544
No 39
>PF01565 FAD_binding_4: FAD binding domain This is only a subset of the Pfam family; InterPro: IPR006094 Various enzymes use FAD as a co-factor, most of these enzymes are oxygen-dependent oxidoreductases, containing a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage. One of the enzymes Vanillyl-alcohol oxidase (VAO, 1.1.3.38 from EC) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110 []. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyses the oxidation of a wide variety of substrates, ranging from aromatic amines to 4-alkylphenols. ; GO: 0008762 UDP-N-acetylmuramate dehydrogenase activity, 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZR6_A 3HSU_A 2AXR_A 3D2J_A 3D2H_A 3FW9_A 3FW8_A 3FW7_A 3GSY_A 3FWA_A ....
Probab=96.27 E-value=0.0044 Score=59.96 Aligned_cols=101 Identities=13% Similarity=0.125 Sum_probs=68.4
Q ss_pred EEEccCCHHHHHHHHHh---C-CCCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEcccccHHHHHH
Q psy14046 173 TWYRPQTLTQLLELKAK---F-PEAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGATSLNDMRA 248 (857)
Q Consensus 173 ~~~~P~sl~eal~ll~~---~-~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~ 248 (857)
-+++|+|.+|+.++++. + -..++.+||+...-. .......+||++++...-.+..++..++++|++++.+|.+
T Consensus 3 ~vv~P~s~~ev~~~v~~a~~~~~~v~~~g~G~~~~~~---~~~~~~ivi~~~~l~~i~~id~~~~~v~v~aG~~~~~l~~ 79 (139)
T PF01565_consen 3 AVVRPKSVEEVQAIVKFANENGVPVRVRGGGHSWTGQ---SSDEGGIVIDMSRLNKIIEIDPENGTVTVGAGVTWGDLYE 79 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHTTSEEEEESSSTTSSST---TSSTTEEEEECTTCGCEEEEETTTTEEEEETTSBHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCcccc---cccCCcEEEeeccccccccccccceeEEEeccccchhccc
Confidence 36899999999987654 2 246778888887632 1124567999987554333444578999999999999999
Q ss_pred HHHHHhhhcCCchhhhHHHHHHHHHhhc-CHhhhcceeccCcccccC
Q psy14046 249 ILSEQIEKLPSHKSRVYVAIVEMLHWFA-GNQIRNVAAIGGNIMTGS 294 (857)
Q Consensus 249 ~l~~~~~~~p~~~~~~~~~L~~a~~~ia-s~qIRN~aTiGGNI~~as 294 (857)
.+.+. -..+. .+.--.-+|+||.|++..
T Consensus 80 ~l~~~------------------g~~~~~~~~~~~~~tvGG~i~~~~ 108 (139)
T PF01565_consen 80 ALAPR------------------GLMLPVEPGSGIPGTVGGAIAGNG 108 (139)
T ss_dssp HHHHH------------------TEEESSGGGSTTTSBHHHHHHTT-
T ss_pred ccccc------------------cccccccccccccceEchhhcCCC
Confidence 86421 12222 133445689999998765
No 40
>PRK14653 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.21 E-value=0.022 Score=62.58 Aligned_cols=159 Identities=12% Similarity=0.176 Sum_probs=99.8
Q ss_pred cceeeecCCcEEEccCCHHHHHHHHHhCC---CCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEcc
Q psy14046 163 EYLQIRGPRATWYRPQTLTQLLELKAKFP---EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGG 239 (857)
Q Consensus 163 ~~~~~~~~~~~~~~P~sl~eal~ll~~~~---~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA 239 (857)
.++.+.|..--|+.|.|.+|+.++++... ...++.|||-+.+. ....+..+|.+++ ++.|+.+++.|++||
T Consensus 26 tt~~iGG~A~~~v~p~s~eel~~~~~~~~~~~p~~vlG~GSNlLv~---d~g~~gvVI~l~~---~~~i~i~~~~v~v~A 99 (297)
T PRK14653 26 VSFKIGGPVPLFAIPNSTNGFIETINLLKEGIEVKILGNGTNVLPK---DEPMDFVVVSTER---LDDIFVDNDKIICES 99 (297)
T ss_pred CEeeeCcEEEEEEecCCHHHHHHHHHHHhcCCCEEEEcCCeeEEEe---cCCccEEEEEeCC---cCceEEeCCEEEEeC
Confidence 56788887778999999999998775321 36789999999873 1123356787654 667777778999999
Q ss_pred cccHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccCC-C-CCHHHHHhhcCcEEEEEEcCC
Q psy14046 240 ATSLNDMRAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGSP-I-SDMNPILMAARCRLLLESKAE 317 (857)
Q Consensus 240 ~vTl~~l~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~asp-~-sDl~p~LlAldA~v~l~s~~~ 317 (857)
++++.+|...+.+. .+.. ++.++.. =|||||++++-.- . .++.=.+. +|++.+. +
T Consensus 100 G~~l~~L~~~~~~~----------GL~G----lE~l~gI----PGTVGGAv~mNAGayG~ei~d~l~----~V~~~d~-g 156 (297)
T PRK14653 100 GLSLKKLCLVAAKN----------GLSG----FENAYGI----PGSVGGAVYMNAGAYGWETAENIV----EVVAYDG-K 156 (297)
T ss_pred CCcHHHHHHHHHHC----------CCcc----hhhhcCC----chhHHHHHHHhCccCchhhheeEE----EEEEECC-C
Confidence 99999999876531 1111 2223332 4778888864322 2 22222222 5555543 3
Q ss_pred CeEEEEcccccccccccccCCCC--cEEEEEEecCC
Q psy14046 318 GTREVTMDGSFYTSYRKNIVRPD--EVLRAIYIPHT 351 (857)
Q Consensus 318 G~R~vpl~e~F~~g~~~t~L~~~--EiI~~I~iP~~ 351 (857)
..+++.-+| .--+||...++.. -||+++.+...
T Consensus 157 ~v~~~~~~e-~~f~YR~S~~~~~~~~iI~~a~f~L~ 191 (297)
T PRK14653 157 KIIRLGKNE-IKFSYRNSIFKEEKDLIILRVTFKLK 191 (297)
T ss_pred EEEEEchhh-ccccCccccCCCCCcEEEEEEEEEEe
Confidence 356666666 5556766665432 26666665443
No 41
>TIGR01676 GLDHase galactonolactone dehydrogenase. This model represents L-Galactono-gamma-lactone dehydrogenase (EC 1.3.2.3). This enzyme catalyzes the final step in ascorbic acid biosynthesis in higher plants. This protein is homologous to ascorbic acid biosynthesis enzymes of other species: L-gulono-gamma-lactone oxidase in rat and L-galactono-gamma-lactone oxidase in yeast. All three covalently bind the cofactor FAD.
Probab=96.04 E-value=0.0084 Score=70.63 Aligned_cols=102 Identities=13% Similarity=0.125 Sum_probs=70.9
Q ss_pred CcEEEccCCHHHHHHHHHhC---C-CCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEcccccHHHH
Q psy14046 171 RATWYRPQTLTQLLELKAKF---P-EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGATSLNDM 246 (857)
Q Consensus 171 ~~~~~~P~sl~eal~ll~~~---~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l 246 (857)
.-.+++|+|.+|+.++++.. + ..++++||++..-. ......+||++++..+-.|..+...++++|++++.+|
T Consensus 62 p~~~~~P~s~eEV~~iV~~A~~~g~~Vr~~GsGhS~sg~----a~t~g~lldL~~ln~Vl~vD~~~~tVtV~AG~~l~~L 137 (541)
T TIGR01676 62 TRTFHQPEAIEELEGIVKQANEKKARIRPVGSGLSPNGI----GLSRAGMVNLALMDKVLEVDEEKKRVRVQAGIRVQQL 137 (541)
T ss_pred cceEECCCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCc----ccCCCeEEEhhhCCCCEEEcCCCCEEEEcCCCCHHHH
Confidence 45689999999999987653 2 47888888886331 1122358999987766666667789999999999999
Q ss_pred HHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccC
Q psy14046 247 RAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGS 294 (857)
Q Consensus 247 ~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~as 294 (857)
.+.+.+. --.+.+..--+..||||+|+++.
T Consensus 138 ~~~L~~~------------------Glal~n~gsi~~~TIGGaiatgt 167 (541)
T TIGR01676 138 VDAIKEY------------------GITLQNFASIREQQIGGIIQVGA 167 (541)
T ss_pred HHHHHHc------------------CCEeccCCCCCCceEccccccCC
Confidence 9886521 01122222235689999999763
No 42
>COG0277 GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion]
Probab=96.00 E-value=0.0079 Score=69.98 Aligned_cols=102 Identities=15% Similarity=0.148 Sum_probs=74.7
Q ss_pred cEEEccCCHHHHHHHHHhC--CC--CEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEcccccHHHHH
Q psy14046 172 ATWYRPQTLTQLLELKAKF--PE--AKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGATSLNDMR 247 (857)
Q Consensus 172 ~~~~~P~sl~eal~ll~~~--~~--a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 247 (857)
.-+..|+|.+|..++++.- .+ ..+.+|||++.-...-. ..++||++++..+..|..++..+++.+++++.+|.
T Consensus 33 ~~v~~p~s~~eV~~iv~~a~~~~~~v~prG~gts~~g~~~~~---~gvvl~l~~mn~i~~id~~~~~~~v~aGv~l~~l~ 109 (459)
T COG0277 33 LAVVFPKSEEEVAAILRLANENGIPVVPRGGGTSLSGGAVPD---GGVVLDLSRLNRILEIDPEDGTATVQAGVTLEDLE 109 (459)
T ss_pred CEEEccCCHHHHHHHHHHHHHcCCeEEEECCCCCccccccCC---CcEEEEchhhcchhccCcCCCEEEEcCCccHHHHH
Confidence 4678999999999877652 22 56779999985432111 15899999966555566678999999999999999
Q ss_pred HHHHHHhhhcCCchhhhHHHHHHHHHhh-cCHhhhcceeccCcccccC
Q psy14046 248 AILSEQIEKLPSHKSRVYVAIVEMLHWF-AGNQIRNVAAIGGNIMTGS 294 (857)
Q Consensus 248 ~~l~~~~~~~p~~~~~~~~~L~~a~~~i-as~qIRN~aTiGGNI~~as 294 (857)
+.++.. -..+ ..|+.++.+||||||++.+
T Consensus 110 ~~l~~~------------------G~~~p~~p~s~~~~tIGG~ia~~~ 139 (459)
T COG0277 110 KALAPH------------------GLFLPVDPSSSGTATIGGNIATNA 139 (459)
T ss_pred HHHHHc------------------CCccCCCccccccceEccchhcCC
Confidence 886532 1112 3666779999999999775
No 43
>PRK12436 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=95.77 E-value=0.038 Score=61.07 Aligned_cols=157 Identities=11% Similarity=0.204 Sum_probs=96.9
Q ss_pred eeecCCcEEEccCCHHHHHHHHHh---CC-CCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEcccc
Q psy14046 166 QIRGPRATWYRPQTLTQLLELKAK---FP-EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGAT 241 (857)
Q Consensus 166 ~~~~~~~~~~~P~sl~eal~ll~~---~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~v 241 (857)
.+.+..--++.|.|.+|+.++++- +. ...++.|||.+.+. .+. ....+|++++ |+.|+.+++.+++||++
T Consensus 32 ~igg~a~~vv~p~~~edv~~~l~~a~~~~ip~~v~GgGSNll~~--d~g-~~GvvI~l~~---l~~i~~~~~~v~v~aG~ 105 (305)
T PRK12436 32 KVGGKADVFVAPTNYDEIQEVIKYANKYNIPVTFLGNGSNVIIK--DGG-IRGITVSLIH---ITGVTVTGTTIVAQCGA 105 (305)
T ss_pred ccCceEEEEEecCCHHHHHHHHHHHHHcCCCEEEEcCCeEEEEe--CCC-eeEEEEEeCC---cCcEEEeCCEEEEEeCC
Confidence 445555568899999999987742 21 36789999999742 121 2357898865 56777778899999999
Q ss_pred cHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCccccc-CCCC-CHHHHHhhcCcEEEEEEcCCC-
Q psy14046 242 SLNDMRAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTG-SPIS-DMNPILMAARCRLLLESKAEG- 318 (857)
Q Consensus 242 Tl~~l~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~a-sp~s-Dl~p~LlAldA~v~l~s~~~G- 318 (857)
++.+|.+.+.+. .+..| ...+ ---|||||++.+- .-.+ ++.= .+ ..+++... +|
T Consensus 106 ~~~~L~~~~~~~----------gl~Gl----e~~~----giPGtVGGav~~NAGayG~~~~d---vl-~~v~vv~~-~G~ 162 (305)
T PRK12436 106 AIIDVSRIALDH----------NLTGL----EFAC----GIPGSVGGALYMNAGAYGGEISF---VL-TEAVVMTG-DGE 162 (305)
T ss_pred cHHHHHHHHHHc----------CCccc----hhhc----CCccchhHHHHhcCccchhehhe---ee-eEEEEEeC-CCC
Confidence 999999875431 01011 1111 1247899999743 3222 1100 01 12233344 34
Q ss_pred eEEEEcccccccccccccCCCC-cEEEEEEecCCC
Q psy14046 319 TREVTMDGSFYTSYRKNIVRPD-EVLRAIYIPHTA 352 (857)
Q Consensus 319 ~R~vpl~e~F~~g~~~t~L~~~-EiI~~I~iP~~~ 352 (857)
.++++-+| ..-+||...++.+ .||++..+....
T Consensus 163 v~~~~~~e-~~f~YR~s~~~~~~~iil~a~~~l~~ 196 (305)
T PRK12436 163 LRTLTKEA-FEFGYRKSVFANNHYIILEARFELEE 196 (305)
T ss_pred EEEEEHHH-hcCcCCCCcCCCCCEEEEEEEEEEcC
Confidence 56777777 7778888777653 367777765543
No 44
>PRK00046 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=95.55 E-value=0.087 Score=58.79 Aligned_cols=159 Identities=14% Similarity=0.123 Sum_probs=94.5
Q ss_pred cceeeecCCcEEEccCCHHHHHHHHHhC---C-CCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCcee---cCC--
Q psy14046 163 EYLQIRGPRATWYRPQTLTQLLELKAKF---P-EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRV---EEN-- 233 (857)
Q Consensus 163 ~~~~~~~~~~~~~~P~sl~eal~ll~~~---~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~---~~~-- 233 (857)
.++.+.|..-.|+.|.|.+|+.++++.. . ...+|.||+-+++. +..+..+|.+ + ++.++. +++
T Consensus 13 tt~riGG~A~~~~~p~~~~el~~~~~~~~~~~~p~~vlG~GSNlLv~----D~~~g~vI~~-~---~~~~~~~~~~~~~~ 84 (334)
T PRK00046 13 NTFGIDARARHLVEAESEEQLLEALADARAAGLPVLVLGGGSNVLFT----EDFDGTVLLN-R---IKGIEVLSEDDDAW 84 (334)
T ss_pred ceeccCcEEeEEEeeCCHHHHHHHHHHHHHcCCCEEEEeceEEEEEC----CCCCEEEEEe-c---CCceEEEecCCCeE
Confidence 4677888777899999999999987642 1 36789999999883 2244566764 2 455554 333
Q ss_pred eEEEcccccHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccCCCCCHHHHHhhcCcEEEEE
Q psy14046 234 GVWIGGATSLNDMRAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGSPISDMNPILMAARCRLLLE 313 (857)
Q Consensus 234 ~l~IGA~vTl~~l~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~asp~sDl~p~LlAldA~v~l~ 313 (857)
.|++||++.+.+|.....+. ...-+-.|+-.=..||+--+-|.|.-|+.| +|.. -+|++.
T Consensus 85 ~v~a~AG~~~~~l~~~~~~~-------gl~GlE~l~gIPGTVGGAv~mNaGayG~ei------~d~l-------~~V~v~ 144 (334)
T PRK00046 85 YLHVGAGENWHDLVLWTLQQ-------GMPGLENLALIPGTVGAAPIQNIGAYGVEL------KDVC-------DYVEAL 144 (334)
T ss_pred EEEEEcCCcHHHHHHHHHHc-------CchhhHHhcCCCcchhHHHHhcCCcCcccH------heeE-------EEEEEE
Confidence 69999999999999875431 001122222222334444444544444444 2221 134555
Q ss_pred EcC-CCeEEEEcccccccccccccCCCC----cEEEEEEecC
Q psy14046 314 SKA-EGTREVTMDGSFYTSYRKNIVRPD----EVLRAIYIPH 350 (857)
Q Consensus 314 s~~-~G~R~vpl~e~F~~g~~~t~L~~~----EiI~~I~iP~ 350 (857)
..+ +..+++.-+| ..-+||...++.+ .+|+++.+..
T Consensus 145 d~~~g~~~~~~~~e-~~f~YR~S~f~~~~~~~~iVl~a~f~L 185 (334)
T PRK00046 145 DLATGEFVRLSAAE-CRFGYRDSIFKHEYPDRYAITAVGFRL 185 (334)
T ss_pred ECCCCcEEEEEHHH-cCcccccccCCCCCcCCEEEEEEEEEe
Confidence 442 2356677777 6667776665532 3555555443
No 45
>PLN02465 L-galactono-1,4-lactone dehydrogenase
Probab=95.21 E-value=0.11 Score=61.97 Aligned_cols=102 Identities=16% Similarity=0.225 Sum_probs=66.1
Q ss_pred CcEEEccCCHHHHHHHHHhC---C-CCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEcccccHHHH
Q psy14046 171 RATWYRPQTLTQLLELKAKF---P-EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGATSLNDM 246 (857)
Q Consensus 171 ~~~~~~P~sl~eal~ll~~~---~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l 246 (857)
.-.+++|+|.+|+.++++.. . ..++++||.+..-.. .....+||++++..+-.|..+...++++|++++.+|
T Consensus 97 p~~vv~P~S~eEV~~iV~~A~~~g~~VrvvGsGhS~~~l~----~td~glIdL~~l~~Il~vD~e~~~VtV~AG~~l~~L 172 (573)
T PLN02465 97 TRRYHQPESLEELEDIVKEAHEKGRRIRPVGSGLSPNGLA----FSREGMVNLALMDKVLEVDKEKKRVTVQAGARVQQV 172 (573)
T ss_pred CCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCee----eCCCEEEECcCCCCcEEEeCCCCEEEEccCCCHHHH
Confidence 34689999999999877642 2 477888887542111 122357898775544334444578999999999999
Q ss_pred HHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccC
Q psy14046 247 RAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGS 294 (857)
Q Consensus 247 ~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~as 294 (857)
.+.+.+. .|+ +...++. +.+||||.|+++.
T Consensus 173 ~~~L~~~-------------GLa--l~n~g~I---~~~TIGGaIstGt 202 (573)
T PLN02465 173 VEALRPH-------------GLT--LQNYASI---REQQIGGFIQVGA 202 (573)
T ss_pred HHHHHHc-------------CCE--eccCCCC---CCeeecchhhCCC
Confidence 9886531 011 2223332 4679999997653
No 46
>TIGR00387 glcD glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity.
Probab=95.14 E-value=0.023 Score=65.53 Aligned_cols=99 Identities=9% Similarity=0.034 Sum_probs=65.3
Q ss_pred EccCCHHHHHHHHHh---CC-CCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEcccccHHHHHHHH
Q psy14046 175 YRPQTLTQLLELKAK---FP-EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGATSLNDMRAIL 250 (857)
Q Consensus 175 ~~P~sl~eal~ll~~---~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l 250 (857)
++|.|.+|+.++++. +. ...+.+|||.+.-.. -......+||++++.....|..++..++++|++++.+|.+.+
T Consensus 2 v~P~s~eev~~iv~~a~~~~i~v~~~G~Gt~~~g~~--~~~~~~vvidl~~mn~i~~id~~~~~v~veaGv~~~~l~~~l 79 (413)
T TIGR00387 2 VFPKNTEQVARILKLCHEHRIPIVPRGAGTGLSGGA--LPEEGGLVLVFKHMNKILEIDVVNLTAVVQPGVRNLELEQAV 79 (413)
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCc--cCCCCeEEEEhHHcCceeEEcCCCCEEEEcCCccHHHHHHHH
Confidence 479999999887653 32 367889999874110 001234788887654433344446789999999999999986
Q ss_pred HHHhhhcCCchhhhHHHHHHHHHhh-cCHhhhcceeccCccccc
Q psy14046 251 SEQIEKLPSHKSRVYVAIVEMLHWF-AGNQIRNVAAIGGNIMTG 293 (857)
Q Consensus 251 ~~~~~~~p~~~~~~~~~L~~a~~~i-as~qIRN~aTiGGNI~~a 293 (857)
.+. =..+ -.+.-...+||||+|++.
T Consensus 80 ~~~------------------gl~~~~~p~s~~~~tiGG~ia~n 105 (413)
T TIGR00387 80 EEH------------------NLFYPPDPSSQISSTIGGNIAEN 105 (413)
T ss_pred HHc------------------CCeeCCCCcccccceehhhhhcC
Confidence 531 0112 134445679999999864
No 47
>PRK13903 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=95.12 E-value=0.095 Score=59.19 Aligned_cols=82 Identities=13% Similarity=0.142 Sum_probs=61.7
Q ss_pred cceeeecCCcEEEccCCHHHHHHHHHhC----CCCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceec--CCeEE
Q psy14046 163 EYLQIRGPRATWYRPQTLTQLLELKAKF----PEAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVE--ENGVW 236 (857)
Q Consensus 163 ~~~~~~~~~~~~~~P~sl~eal~ll~~~----~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~--~~~l~ 236 (857)
.++.+.+..-.|+.|.|.+|+.++++.. -...++.||+-+.+. ..-.+..+|+++. +.|+.+ ++.|+
T Consensus 25 tt~~iGg~A~~~~~p~s~edl~~~l~~a~~~~~p~~vlGgGSNlLv~---D~g~~GvVI~l~~----~~i~i~~~~~~v~ 97 (363)
T PRK13903 25 TTLRVGGPARRLVTCTSTEELVAAVRELDAAGEPLLVLGGGSNLVIA---DDGFDGTVVRVAT----RGVTVDCGGGLVR 97 (363)
T ss_pred cEeecCccceEEEEeCCHHHHHHHHHHHHHCCCCEEEEeCCeeEeEC---CCCccEEEEEeCC----CcEEEeCCCCEEE
Confidence 5678888777888999999999877532 246789999998752 1223457888763 556655 67899
Q ss_pred EcccccHHHHHHHHH
Q psy14046 237 IGGATSLNDMRAILS 251 (857)
Q Consensus 237 IGA~vTl~~l~~~l~ 251 (857)
+||++++.++...+.
T Consensus 98 vgAG~~~~~l~~~a~ 112 (363)
T PRK13903 98 AEAGAVWDDVVARTV 112 (363)
T ss_pred EEcCCCHHHHHHHHH
Confidence 999999999998754
No 48
>PRK14649 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=95.10 E-value=0.12 Score=56.85 Aligned_cols=160 Identities=18% Similarity=0.238 Sum_probs=97.8
Q ss_pred cceeeecCCcEEEccCCHHHHHHHHHhC---C-CCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCC--eEE
Q psy14046 163 EYLQIRGPRATWYRPQTLTQLLELKAKF---P-EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEEN--GVW 236 (857)
Q Consensus 163 ~~~~~~~~~~~~~~P~sl~eal~ll~~~---~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~--~l~ 236 (857)
.++.+.|..-.|+.|+|.+|+.++++.. . ...++.||+-+.+. ..-....+|+++.. .+ .+..+++ .|+
T Consensus 13 tt~~iGg~a~~~v~p~~~~dl~~~l~~~~~~~ip~~vlG~GSNlL~~---d~g~~GvVI~l~~~-~~-~i~~~~~~~~v~ 87 (295)
T PRK14649 13 TSWRIGGPARYFVEPTTPDEAIAAAAWAEQRQLPLFWLGGGSNLLVR---DEGFDGLVARYRGQ-RW-ELHEHGDTAEVW 87 (295)
T ss_pred cEeeeCceeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEecceeEEEe---CCCcCeEEEEecCC-Cc-EEEEeCCcEEEE
Confidence 5678888877899999999999876532 2 36789999998763 22234578887642 23 4555555 799
Q ss_pred EcccccHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccC-cccccCCC-CCHHHHHhhcCcEEEEEE
Q psy14046 237 IGGATSLNDMRAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGG-NIMTGSPI-SDMNPILMAARCRLLLES 314 (857)
Q Consensus 237 IGA~vTl~~l~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGG-NI~~asp~-sDl~p~LlAldA~v~l~s 314 (857)
+||++++.++...+.+. .+..|- ..+.. =||+|| =++|+.-. .++.=.|. .|++..
T Consensus 88 v~AG~~~~~l~~~~~~~----------GL~GlE----~l~GI----PGTvGGa~~mNaGayg~ei~d~l~----~V~~~~ 145 (295)
T PRK14649 88 VEAGAPMAGTARRLAAQ----------GWAGLE----WAEGL----PGTIGGAIYGNAGCYGGDTATVLI----RAWLLL 145 (295)
T ss_pred EEcCCcHHHHHHHHHHc----------CCcccc----ccCCC----CcchhHHHHhhccccceEhheeEE----EEEEEe
Confidence 99999999999875431 111111 11111 257777 33444433 12222222 244444
Q ss_pred cCCCeEEEEcccccccccccccCCC---------CcEEEEEEecC
Q psy14046 315 KAEGTREVTMDGSFYTSYRKNIVRP---------DEVLRAIYIPH 350 (857)
Q Consensus 315 ~~~G~R~vpl~e~F~~g~~~t~L~~---------~EiI~~I~iP~ 350 (857)
.++..++++-+| .+-+||...++. +.+|+++.+-.
T Consensus 146 ~~g~~~~~~~~e-l~f~YR~S~~~~~~~~~~~~~~~ii~~~~~~l 189 (295)
T PRK14649 146 NGSECVEWSVHD-FAYGYRTSVLKQLRADGITWRPPLVLAARFRL 189 (295)
T ss_pred CCCCEEEEeHHH-cCcccceeecccccccccccCCeEEEEEEEEE
Confidence 423467778787 877888777664 23777766543
No 49
>TIGR01679 bact_FAD_ox FAD-linked oxidoreductase. This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae.
Probab=94.96 E-value=0.051 Score=62.84 Aligned_cols=76 Identities=12% Similarity=0.064 Sum_probs=55.7
Q ss_pred cEEEccCCHHHHHHHHHhCC-CCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEcccccHHHHHHHH
Q psy14046 172 ATWYRPQTLTQLLELKAKFP-EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGATSLNDMRAIL 250 (857)
Q Consensus 172 ~~~~~P~sl~eal~ll~~~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l 250 (857)
...++|+|.+|+.++++... ..++++||++..-. ......+||++++..+-.+..+.+.++++|++++.+|.+.+
T Consensus 13 ~~v~~P~s~~ev~~~v~~a~~~v~~~G~Ghs~~~~----~~~~g~~idl~~l~~i~~~d~~~~~v~v~aG~~l~~l~~~L 88 (419)
T TIGR01679 13 SAIVRPTDEGELADVIAQAAKPVRAVGSGHSFTDL----ACTDGTMISLTGLQGVVDVDQPTGLATVEAGTRLGALGPQL 88 (419)
T ss_pred CeEECCCCHHHHHHHHHHhCCCEEEEeCCCCCCCc----ccCCCEEEEhhHcCCceeecCCCCEEEEcCCCCHHHHHHHH
Confidence 35789999999999876542 47888888765431 12235799998755443445557899999999999999886
Q ss_pred H
Q psy14046 251 S 251 (857)
Q Consensus 251 ~ 251 (857)
.
T Consensus 89 ~ 89 (419)
T TIGR01679 89 A 89 (419)
T ss_pred H
Confidence 5
No 50
>PRK11183 D-lactate dehydrogenase; Provisional
Probab=94.91 E-value=0.065 Score=62.76 Aligned_cols=102 Identities=16% Similarity=0.090 Sum_probs=67.1
Q ss_pred CcEEEccCCHHHHHHHHHhC--CC--CEEEecCcchhhhhhcCCCCC--------CeeecCCCCCCCCCceecCCeEEEc
Q psy14046 171 RATWYRPQTLTQLLELKAKF--PE--AKLVVGNSEIGVEVKFKKFFY--------PVLIQPSLIPELTQPRVEENGVWIG 238 (857)
Q Consensus 171 ~~~~~~P~sl~eal~ll~~~--~~--a~lvAGgTdl~~~~~~~~~~~--------~~lIdl~~I~EL~~I~~~~~~l~IG 238 (857)
..-.++|.|.+|..++++-- -+ ...-+|||+|. +...| .++||+.++..+..|. ++..+++.
T Consensus 39 P~AVV~P~SteEVa~IVklC~e~~vPVIPRGgGTGLt-----GGAvP~~~~~dR~gVVIsl~RMNrIleID-~~~~VvVe 112 (564)
T PRK11183 39 ALAVVFPGTLLELWRVLQACVAADKIIIMQAANTGLT-----GGSTPNGNDYDRDIVIISTLRLDKIQLLN-NGKQVLAL 112 (564)
T ss_pred CCEEEecCCHHHHHHHHHHHHHcCCeEEEeCCCcccc-----cCcccCCCCCcCCEEEEEhhHcCCcEEEC-CCCeEEEe
Confidence 34567999999999877642 13 34558899883 22222 4789988866555555 45789999
Q ss_pred ccccHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccC
Q psy14046 239 GATSLNDMRAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGS 294 (857)
Q Consensus 239 A~vTl~~l~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~as 294 (857)
+++|+.+|.+.++.. ..+|. ..++|.+|- +||||||++.+
T Consensus 113 PGVtl~~LeeaLk~~---------Gl~p~-----sd~GSS~IG--asIGGnIAtNA 152 (564)
T PRK11183 113 PGTTLYQLEKALKPL---------GREPH-----SVIGSSCIG--ASVIGGICNNS 152 (564)
T ss_pred CCCcHHHHHHHHHHh---------CCCCC-----CcccccccC--CCCccceEECC
Confidence 999999999987632 11111 112343332 48999999765
No 51
>PRK14648 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=94.82 E-value=0.16 Score=56.83 Aligned_cols=83 Identities=17% Similarity=0.202 Sum_probs=60.0
Q ss_pred cceeeecCCcEEEccCCHHHHHHHHHhC--C--CCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCce----ecC-C
Q psy14046 163 EYLQIRGPRATWYRPQTLTQLLELKAKF--P--EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPR----VEE-N 233 (857)
Q Consensus 163 ~~~~~~~~~~~~~~P~sl~eal~ll~~~--~--~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~----~~~-~ 233 (857)
.++.+.|..-.|+.|.|.+|+.++++.. . ...+|.||+-+++. ..-.+..+|.++++ +.++ .++ .
T Consensus 22 tT~rIGG~A~~~~~p~s~~el~~~l~~~~~~~~p~~iLG~GSNlL~~---D~g~~G~VI~l~~~---~~i~i~~~~~~~~ 95 (354)
T PRK14648 22 CSFRIGGAAQFWAEPRSCTQLRALIEEAQRARIPLSLIGGGSNVLIA---DEGVPGLMLSLRRF---RSLHTQTQRDGSV 95 (354)
T ss_pred ceeeeCcEEEEEEeeCCHHHHHHHHHHHHHcCCCEEEEeceeEEEEe---CCCccEEEEEeCCc---CceEEeeccCCcE
Confidence 5678888888899999999999987632 1 35689999998873 22244567876544 4444 233 3
Q ss_pred eEEEcccccHHHHHHHHH
Q psy14046 234 GVWIGGATSLNDMRAILS 251 (857)
Q Consensus 234 ~l~IGA~vTl~~l~~~l~ 251 (857)
.|++||++.+.+|.....
T Consensus 96 ~v~agAG~~~~~Lv~~~~ 113 (354)
T PRK14648 96 LVHAGAGLPVAALLAFCA 113 (354)
T ss_pred EEEEEeCCcHHHHHHHHH
Confidence 699999999999988754
No 52
>TIGR01678 FAD_lactone_ox sugar 1,4-lactone oxidases. This model represents a family of at least two different sugar 1,4 lactone oxidases, both involved in synthesizing ascorbic acid or a derivative. These include L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. Members are proposed to have the cofactor FAD covalently bound at a site specified by Prosite motif PS00862; OX2_COVAL_FAD; 1.
Probab=94.74 E-value=0.041 Score=63.97 Aligned_cols=101 Identities=18% Similarity=0.226 Sum_probs=66.1
Q ss_pred cEEEccCCHHHHHHHHHhC---C-CCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEcccccHHHHH
Q psy14046 172 ATWYRPQTLTQLLELKAKF---P-EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGATSLNDMR 247 (857)
Q Consensus 172 ~~~~~P~sl~eal~ll~~~---~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 247 (857)
-..++|+|.+|+.++++.- . ..++++||++..-. ......+||++++..+..|..+.+.++++|++++.+|.
T Consensus 16 ~~v~~P~s~eev~~iv~~A~~~~~~v~v~G~GhS~s~~----~~~~gvvIdl~~l~~i~~id~~~~~vtV~aG~~l~~L~ 91 (438)
T TIGR01678 16 EVYYQPTSVEEVREVLALAREQKKKVKVVGGGHSPSDI----ACTDGFLIHLDKMNKVLQFDKEKKQITVEAGIRLYQLH 91 (438)
T ss_pred CEEEecCCHHHHHHHHHHHHHCCCeEEEECCCCCCCCC----ccCCeEEEEhhhcCCceEEcCCCCEEEEcCCCCHHHHH
Confidence 3578999999999877542 2 46788888654221 11235799998855444444445689999999999999
Q ss_pred HHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccccC
Q psy14046 248 AILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTGS 294 (857)
Q Consensus 248 ~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~as 294 (857)
+.+.+. . +. +...++. +.+||||.|+++.
T Consensus 92 ~~L~~~---------G----l~--l~~~g~~---~~~TvGG~iatg~ 120 (438)
T TIGR01678 92 EQLDEH---------G----YS--MSNLGSI---SEVSVAGIISTGT 120 (438)
T ss_pred HHHHHc---------C----CE--ecCCCCC---CCceeeehhcCCC
Confidence 886531 0 11 1222321 4589999887654
No 53
>PRK11230 glycolate oxidase subunit GlcD; Provisional
Probab=94.30 E-value=0.086 Score=62.34 Aligned_cols=102 Identities=10% Similarity=0.045 Sum_probs=68.3
Q ss_pred EEEccCCHHHHHHHHHh---CC-CCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEcccccHHHHHH
Q psy14046 173 TWYRPQTLTQLLELKAK---FP-EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGATSLNDMRA 248 (857)
Q Consensus 173 ~~~~P~sl~eal~ll~~---~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~ 248 (857)
-.++|.|.+|..++++. +. -..+.+|||.+.-.. -......+||++++..+..|..++..++++|++|+.+|.+
T Consensus 58 ~Vv~P~s~eeV~~iv~~a~~~~ipv~~rG~Gt~~~gg~--~~~~~gividl~~ln~I~~id~~~~~v~VeaGv~~~~L~~ 135 (499)
T PRK11230 58 LVVLPKQMEQVQALLAVCHRLRVPVVARGAGTGLSGGA--LPLEKGVLLVMARFNRILDINPVGRRARVQPGVRNLAISQ 135 (499)
T ss_pred EEEeeCCHHHHHHHHHHHHHcCCeEEEECCCcCcCCCc--ccCCCcEEEEcccCCCceEEcCCCCEEEEcCCccHHHHHH
Confidence 46789999999887663 22 245678888872210 0112357999988655545555678899999999999999
Q ss_pred HHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCccccc
Q psy14046 249 ILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTG 293 (857)
Q Consensus 249 ~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~a 293 (857)
.+.+. .. ..-..+.-...+||||||++.
T Consensus 136 ~l~~~---------Gl--------~~~~~p~s~~~~tvGG~ia~n 163 (499)
T PRK11230 136 AAAPH---------GL--------YYAPDPSSQIACSIGGNVAEN 163 (499)
T ss_pred HHHHc---------CC--------eeCCCCCccccceEcceeccC
Confidence 87531 00 011234445679999999864
No 54
>PRK14651 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=94.24 E-value=0.35 Score=52.50 Aligned_cols=155 Identities=19% Similarity=0.287 Sum_probs=95.9
Q ss_pred cceeeecCCcEEEccCCHHHHHHHHHhCCCCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEccccc
Q psy14046 163 EYLQIRGPRATWYRPQTLTQLLELKAKFPEAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGATS 242 (857)
Q Consensus 163 ~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vT 242 (857)
.++.+.|..-.|+ |.|.+|+.+++. -...++.||+-+++. ..-.+..+|-+++ .+..++.++ ++||++.
T Consensus 13 tt~riGG~A~~~~-p~~~~~l~~~~~--~p~~vlG~GSNlL~~---D~g~~g~vI~l~~--~~~~~~~~~---~a~AG~~ 81 (273)
T PRK14651 13 TTLGVGGPAELWT-VETHEQLAEATE--APYRVLGGGSNLLVS---DAGVPERVIRLGG--EFAEWDLDG---WVGGGVP 81 (273)
T ss_pred cEeecCceEEEEe-cCCHHHHHHHHC--CCeEEEeceeEEEEc---CCCcceEEEEECC--cceeEeECC---EEECCCc
Confidence 4577777665566 999999999883 357899999998873 1223356676643 255565443 7999999
Q ss_pred HHHHHHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccc-cCCC-CCHHHHHhhcCcEEEEEEcCCCeE
Q psy14046 243 LNDMRAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMT-GSPI-SDMNPILMAARCRLLLESKAEGTR 320 (857)
Q Consensus 243 l~~l~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~-asp~-sDl~p~LlAldA~v~l~s~~~G~R 320 (857)
+.++.....+. .+.. +.+++.. =|||||.+.+ |--. .++.=.+.. |++... +..+
T Consensus 82 ~~~l~~~~~~~----------gl~G----lE~l~gI----PGTVGGAv~mNaGayG~ei~d~l~~----V~~~~~-g~~~ 138 (273)
T PRK14651 82 LPGLVRRAARL----------GLSG----LEGLVGI----PAQVGGAVKMNAGTRFGEMADALHT----VEIVHD-GGFH 138 (273)
T ss_pred HHHHHHHHHHC----------CCcc----hhhhcCC----CcchhhHHHhhCCccccChheeEEE----EEEEEC-CCEE
Confidence 99999875431 1111 1222221 2566665542 2211 222222222 233333 4578
Q ss_pred EEEcccccccccccccCCCCcEEEEEEecCCC
Q psy14046 321 EVTMDGSFYTSYRKNIVRPDEVLRAIYIPHTA 352 (857)
Q Consensus 321 ~vpl~e~F~~g~~~t~L~~~EiI~~I~iP~~~ 352 (857)
+++-+| ..-+||.+.++.+.+|+++.+...+
T Consensus 139 ~~~~~e-~~f~YR~S~~~~~~iIl~a~f~l~~ 169 (273)
T PRK14651 139 QYSPDE-LGFGYRHSGLPPGHVVTRVRLKLRP 169 (273)
T ss_pred EEEHHH-ccccccccCCCCCEEEEEEEEEECC
Confidence 888888 8889999988877789988876654
No 55
>TIGR01677 pln_FAD_oxido plant-specific FAD-dependent oxidoreductase. This model represents an uncharacterized plant-specific family of FAD-dependent oxidoreductases. At least seven distinct members are found in Arabidopsis thaliana. The family shows considerable sequence similarity to three different enzymes of ascorbic acid biosynthesis: L-galactono-1,4-lactone dehydrogenase (EC 1.3.2.3) from higher plants, D-arabinono-1,4-lactone oxidase (EC 1.1.3.37 from Saccharomyces cerevisiae, and L-gulonolactone oxidase (EC 1.1.3.8) from mouse, as well as to a bacterial sorbitol oxidase. The class of compound acted on by members of this family is unknown.
Probab=94.10 E-value=0.077 Score=63.31 Aligned_cols=81 Identities=16% Similarity=0.085 Sum_probs=51.1
Q ss_pred cEEEccCCHHHHHHHHHhC---C-CCEEEecCcchhhhhhcCCCCC-CeeecCCCCCCCCCceecCCeEEEcccccHHHH
Q psy14046 172 ATWYRPQTLTQLLELKAKF---P-EAKLVVGNSEIGVEVKFKKFFY-PVLIQPSLIPELTQPRVEENGVWIGGATSLNDM 246 (857)
Q Consensus 172 ~~~~~P~sl~eal~ll~~~---~-~a~lvAGgTdl~~~~~~~~~~~-~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l 246 (857)
...++|+|.+|+.++++.- . ..++++|++.....+-...... ..+||++++..+-.|..+...++++|++++.+|
T Consensus 33 ~~vv~P~s~eeV~~iV~~A~~~g~~v~v~GG~gHs~~~~a~t~~~~ggvvIdL~~Ln~il~iD~~~~tVtV~AG~~l~~L 112 (557)
T TIGR01677 33 ANVAYPKTEAELVSVVAAATAAGRKMKVVTRYSHSIPKLACPDGSDGALLISTKRLNHVVAVDATAMTVTVESGMSLREL 112 (557)
T ss_pred CEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCcCcccccCCCCCEEEEEcccCCCCEEEeCCCCEEEECCCCcHHHH
Confidence 3578899999999877642 2 2455544332211110010111 279999886554445555578999999999999
Q ss_pred HHHHHH
Q psy14046 247 RAILSE 252 (857)
Q Consensus 247 ~~~l~~ 252 (857)
.+.|.+
T Consensus 113 ~~~L~~ 118 (557)
T TIGR01677 113 IVEAEK 118 (557)
T ss_pred HHHHHH
Confidence 988653
No 56
>PLN02805 D-lactate dehydrogenase [cytochrome]
Probab=94.08 E-value=0.088 Score=62.89 Aligned_cols=101 Identities=17% Similarity=0.123 Sum_probs=67.5
Q ss_pred cEEEccCCHHHHHHHHHh---CC-CCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEcccccHHHHH
Q psy14046 172 ATWYRPQTLTQLLELKAK---FP-EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGATSLNDMR 247 (857)
Q Consensus 172 ~~~~~P~sl~eal~ll~~---~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 247 (857)
.-.++|+|.+|+.++++. +. ...+.+|||++.-.. .. .....+||++++..+..|..++..++++|++++.+|.
T Consensus 135 ~~Vv~P~s~eeV~~ivk~a~~~~ipv~prGgGts~~G~~-~~-~~ggivIdl~~mn~I~~id~~~~~vtVeaGv~~~~L~ 212 (555)
T PLN02805 135 DVVVFPRSEEEVSKIVKSCNKYKVPIVPYGGATSIEGHT-LA-PHGGVCIDMSLMKSVKALHVEDMDVVVEPGIGWLELN 212 (555)
T ss_pred CEEEEcCCHHHHHHHHHHHHHCCCcEEEECCCCCCCCCc-cC-CCCEEEEEccCCCCeEEEeCCCCEEEEeCCcCHHHHH
Confidence 346789999999887653 32 356788999874210 00 1124799998866655566677889999999999999
Q ss_pred HHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCccccc
Q psy14046 248 AILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMTG 293 (857)
Q Consensus 248 ~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~a 293 (857)
+.+.+.= -.+|.. .+ ..+||||+|++.
T Consensus 213 ~~L~~~G--------l~~p~~-------p~----~~~TIGG~ia~n 239 (555)
T PLN02805 213 EYLEPYG--------LFFPLD-------PG----PGATIGGMCATR 239 (555)
T ss_pred HHHHHcC--------CEeCCC-------Cc----cccChhhHhhCC
Confidence 9876421 112210 11 347999999866
No 57
>COG0812 MurB UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=93.04 E-value=0.27 Score=53.54 Aligned_cols=161 Identities=17% Similarity=0.171 Sum_probs=106.1
Q ss_pred cceeeecCCcEEEccCCHHHHHHHHHhCC----CCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceec--CCeEE
Q psy14046 163 EYLQIRGPRATWYRPQTLTQLLELKAKFP----EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVE--ENGVW 236 (857)
Q Consensus 163 ~~~~~~~~~~~~~~P~sl~eal~ll~~~~----~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~--~~~l~ 236 (857)
.++.+.+..-.|+.|.+.+|+.++++..+ ...++.||+-+++. ..-..-++|.+.. +..+..+ ++.|+
T Consensus 13 ttfriGg~A~~~~~~~~~e~l~~~~~~~~~~~~p~~ilG~GSNlLv~---d~g~~gvvi~~~~---~~~~~~~~~~~~i~ 86 (291)
T COG0812 13 TTFRIGGPAEVLVEPRDIEELKAALKYAKAEDLPVLILGGGSNLLVR---DGGIGGVVIKLGK---LNFIEIEGDDGLIE 86 (291)
T ss_pred eeEecCcceeEEEecCCHHHHHHHHHhhhhcCCCEEEEecCceEEEe---cCCCceEEEEccc---ccceeeeccCCeEE
Confidence 45777777788999999999998776532 36788999988773 2222234454433 4444443 34999
Q ss_pred EcccccHHHHHHHHHHHhhhcCCchhhhHHHHHHH---HHhhcCHhhhcceeccCcccccCCCCCHHHHHhhcCcEEEEE
Q psy14046 237 IGGATSLNDMRAILSEQIEKLPSHKSRVYVAIVEM---LHWFAGNQIRNVAAIGGNIMTGSPISDMNPILMAARCRLLLE 313 (857)
Q Consensus 237 IGA~vTl~~l~~~l~~~~~~~p~~~~~~~~~L~~a---~~~ias~qIRN~aTiGGNI~~asp~sDl~p~LlAldA~v~l~ 313 (857)
+||+..+.+|.....+ ..+..|--+ =..+|+-.+-|.|+-|+.| +|.+. +|++.
T Consensus 87 a~aG~~~~~l~~~~~~----------~gl~GlE~l~gIPGsvGgav~mNaGAyG~Ei------~d~~~-------~v~~l 143 (291)
T COG0812 87 AGAGAPWHDLVRFALE----------NGLSGLEFLAGIPGSVGGAVIMNAGAYGVEI------SDVLV-------SVEVL 143 (291)
T ss_pred EccCCcHHHHHHHHHH----------cCCcchhhhcCCCcccchhhhccCcccccch------heeEE-------EEEEE
Confidence 9999999999987543 223333222 2345666666666666655 44332 34555
Q ss_pred EcCCCeEEEEcccccccccccccCCCC-cEEEEEEecCCCc
Q psy14046 314 SKAEGTREVTMDGSFYTSYRKNIVRPD-EVLRAIYIPHTAE 353 (857)
Q Consensus 314 s~~~G~R~vpl~e~F~~g~~~t~L~~~-EiI~~I~iP~~~~ 353 (857)
..++..+++.-+| .--+||...++.. -+|+++.+...+.
T Consensus 144 d~~G~~~~l~~~e-l~f~YR~S~f~~~~~vvl~v~f~L~~~ 183 (291)
T COG0812 144 DRDGEVRWLSAEE-LGFGYRTSPFKKEYLVVLSVEFKLTKG 183 (291)
T ss_pred cCCCCEEEEEHHH-hCcccccCcCCCCCEEEEEEEEEeCCC
Confidence 5523378999988 7778998888776 7888888876653
No 58
>PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional
Probab=91.44 E-value=0.38 Score=54.28 Aligned_cols=92 Identities=14% Similarity=0.076 Sum_probs=56.5
Q ss_pred HHHHHHHHhCC-CCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEcccccHHHHHHHHHHHhhhcCC
Q psy14046 181 TQLLELKAKFP-EAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGATSLNDMRAILSEQIEKLPS 259 (857)
Q Consensus 181 ~eal~ll~~~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~p~ 259 (857)
.++++...++. ..++..|||.... +......+||++++..+..+..++..++++|++++.+|.+.+.+.=.
T Consensus 8 ~~~v~~A~~~~~~v~~~GgGt~~~~----g~~~~~~vldl~~ln~Ile~d~~~~~vtV~AG~~l~el~~~L~~~G~---- 79 (352)
T PRK11282 8 LERVRQAAADGTPLRIRGGGSKDFY----GRALAGEVLDTRAHRGIVSYDPTELVITARAGTPLAELEAALAEAGQ---- 79 (352)
T ss_pred HHHHHHHHHCCCeEEEECCCCCCCC----CCCCCCeEEEcccCCCcEEEcCCCCEEEECCCCCHHHHHHHHHHcCC----
Confidence 34444433443 3678888885422 11122358999876544444556778999999999999998753210
Q ss_pred chhhhHHHHHHHHHhhcC-H-hhhcceeccCcccccC
Q psy14046 260 HKSRVYVAIVEMLHWFAG-N-QIRNVAAIGGNIMTGS 294 (857)
Q Consensus 260 ~~~~~~~~L~~a~~~ias-~-qIRN~aTiGGNI~~as 294 (857)
.++. + .....+||||+|++..
T Consensus 80 --------------~lp~~p~~~~~~~TIGG~iatg~ 102 (352)
T PRK11282 80 --------------MLPFEPPHFGGGATLGGMVAAGL 102 (352)
T ss_pred --------------eeCCCCCCcCCCcEehhHHhcCC
Confidence 1111 1 1223599999999664
No 59
>PLN02441 cytokinin dehydrogenase
Probab=88.60 E-value=0.73 Score=54.61 Aligned_cols=78 Identities=9% Similarity=-0.042 Sum_probs=53.7
Q ss_pred CcEEEccCCHHHHHHHHHhCC----C--CEEEecCcchhhhhhcCCCCCCeeecCCCCCC------CCCceecCCeEEEc
Q psy14046 171 RATWYRPQTLTQLLELKAKFP----E--AKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPE------LTQPRVEENGVWIG 238 (857)
Q Consensus 171 ~~~~~~P~sl~eal~ll~~~~----~--a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~E------L~~I~~~~~~l~IG 238 (857)
....++|+|.+|..++++... + .++.+||++..-. .......+||++++.. ...+..+...+++|
T Consensus 65 P~aVv~P~S~eDVa~iVr~A~~~~~~~~V~~rGgGHS~~G~---a~~~~GivIdms~Ln~i~~~~~ii~vd~~~~~VtV~ 141 (525)
T PLN02441 65 PAAVLYPSSVEDIASLVRAAYGSSSPLTVAARGHGHSLNGQ---AQAPGGVVVDMRSLRGGVRGPPVIVVSGDGPYVDVS 141 (525)
T ss_pred CCEEEeCCCHHHHHHHHHHHhhccCCceEEEECCCcCCCCC---ccCCCeEEEECCCCCCcCccCceEEEcCCCCEEEEc
Confidence 345789999999998776531 2 3566788887421 1112357999998665 22333456789999
Q ss_pred ccccHHHHHHHHH
Q psy14046 239 GATSLNDMRAILS 251 (857)
Q Consensus 239 A~vTl~~l~~~l~ 251 (857)
|++++.++.+.+.
T Consensus 142 aG~~~~dv~~~l~ 154 (525)
T PLN02441 142 GGELWIDVLKATL 154 (525)
T ss_pred CCCCHHHHHHHHH
Confidence 9999999987743
No 60
>TIGR02965 xanthine_xdhB xanthine dehydrogenase, molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase.
Probab=82.77 E-value=1.9 Score=53.78 Aligned_cols=94 Identities=10% Similarity=0.095 Sum_probs=62.7
Q ss_pred CCCceEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCCEEEEe------cccCCCCCCCCCCCccccCeEE
Q psy14046 714 ETNVSVAVPKLEDGCMEIFVSSQHP-----SEIQEMTAHALGVPSNRIVAKT------KRLGGGFGGKEKLQSELYGLFT 782 (857)
Q Consensus 714 Ep~~~~a~~~~~~~~l~v~~stQ~p-----~~~~~~vA~~Lglp~~~V~V~~------~~~GGgFGgK~~~~~~~yG~i~ 782 (857)
.+..+....+ .+|.++|+++++.. +.+.+.+|+.||+|.++|+|.. +..||.+|.+.+...- .
T Consensus 446 ~~~~a~v~i~-~dG~v~v~~g~~e~GQG~~T~laQIaAe~LGi~~d~V~v~~~DT~~~p~~~gT~gSr~t~~~g---~-- 519 (758)
T TIGR02965 446 NQAGALVHVY-TDGSIHLNHGGTEMGQGLNTKVAQVVAEEFQVDIDRVKITATDTDKVPNTSATAASSGSDLNG---M-- 519 (758)
T ss_pred CccceEEEEe-CCCcEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEEecCccCCCCCCCCchHHHHHHHH---H--
Confidence 3455666664 68899999998653 3456788999999999999985 4556677777543210 0
Q ss_pred EEe-hhHHHHHHHHHHHHHHcCCCHHHHHHhc
Q psy14046 783 EVR-EDDWIAETMGHHVAQFLKLDYADFARSN 813 (857)
Q Consensus 783 ~~r-q~~~a~E~~id~iA~~lg~DP~e~R~~N 813 (857)
.+| -+.-+.+.+.+..|+.+|.+|.+++.+|
T Consensus 520 Av~~Aa~~lr~~l~~~Aa~~l~~~~~~l~~~~ 551 (758)
T TIGR02965 520 AAQDAARQIKERLVAFAAEKWQVPAEDVRFAP 551 (758)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHEEEEC
Confidence 001 1222344455556899999999887665
No 61
>PRK09970 xanthine dehydrogenase subunit XdhA; Provisional
Probab=82.53 E-value=2.5 Score=52.81 Aligned_cols=96 Identities=15% Similarity=0.210 Sum_probs=66.4
Q ss_pred CCCCCceEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCCEEEEe-------cccCCCCCCCCCCCccccC
Q psy14046 712 YLETNVSVAVPKLEDGCMEIFVSSQHP-----SEIQEMTAHALGVPSNRIVAKT-------KRLGGGFGGKEKLQSELYG 779 (857)
Q Consensus 712 ~mEp~~~~a~~~~~~~~l~v~~stQ~p-----~~~~~~vA~~Lglp~~~V~V~~-------~~~GGgFGgK~~~~~~~yG 779 (857)
.++...+....+ .+|.++|++++.-. +.+.+.+|+.||+|.++|+|+. ++-+|.||.+.+...-
T Consensus 457 ~~~~~~a~v~i~-~dGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi~~~~V~v~~~~dT~~~p~~~gt~aSr~t~~~g--- 532 (759)
T PRK09970 457 GLEIAGARLLMN-QDGTVQVQSGATEIGQGSDTVFSQMVAETVGIPVSDVRVISTQDTDVTPFDPGAYASRQSYVAG--- 532 (759)
T ss_pred CCCcceEEEEEc-cCceEEEEECCCCcCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCCCchhhhHHHHH---
Confidence 356677777774 68999999998433 4567888999999999999983 4567788888654310
Q ss_pred eEEEEe-hhHHHHHHHHHHHHHHcCCCHHHHHHhc
Q psy14046 780 LFTEVR-EDDWIAETMGHHVAQFLKLDYADFARSN 813 (857)
Q Consensus 780 ~i~~~r-q~~~a~E~~id~iA~~lg~DP~e~R~~N 813 (857)
. .++ -+.-+.|.+.+.+|+.+|.+|.++..+|
T Consensus 533 ~--Av~~Aa~~lr~~l~~~aa~~l~~~~~~l~~~~ 565 (759)
T PRK09970 533 P--AIRKAALELKEKILAHAAVMLHQSAMNLDIID 565 (759)
T ss_pred H--HHHHHHHHHHHHHHHHHHHHhCCChHHEEEEC
Confidence 0 000 1223345566666889999998877655
No 62
>TIGR02416 CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large subunit. This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins.
Probab=79.90 E-value=2.4 Score=52.94 Aligned_cols=92 Identities=13% Similarity=0.168 Sum_probs=59.8
Q ss_pred CceEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCCEEEEec------ccCCCCCCCCCCCccccCeEEEE
Q psy14046 716 NVSVAVPKLEDGCMEIFVSSQHP-----SEIQEMTAHALGVPSNRIVAKTK------RLGGGFGGKEKLQSELYGLFTEV 784 (857)
Q Consensus 716 ~~~~a~~~~~~~~l~v~~stQ~p-----~~~~~~vA~~Lglp~~~V~V~~~------~~GGgFGgK~~~~~~~yG~i~~~ 784 (857)
..+.+... .||.++|+++++.. +.+.+.+|+.||+|.++|+|... +-+|.||.+.+...- . .+
T Consensus 476 ~~a~v~l~-~dG~v~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t~~~G---~--Av 549 (770)
T TIGR02416 476 DSCEIRIH-PTGSAIARMGTKSQGQGHETTYAQIIATELGIPAEDIMVEEGDTDTAPYGLGTYGSRSTPVAG---A--AT 549 (770)
T ss_pred ceEEEEEC-CCceEEEEECCCCCCCCchHHHHHHHHHHHCCCHHHEEEEecCCCCCCCCCCCchhHHHHHHH---H--HH
Confidence 34666663 68899999998654 35678889999999999999854 456777777653210 0 00
Q ss_pred e-hhHHHHHHHHHHHHHHcCCCHHHHHHhc
Q psy14046 785 R-EDDWIAETMGHHVAQFLKLDYADFARSN 813 (857)
Q Consensus 785 r-q~~~a~E~~id~iA~~lg~DP~e~R~~N 813 (857)
+ -+.-+.|.+.+..|+.+|.+|.+++.+|
T Consensus 550 ~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~ 579 (770)
T TIGR02416 550 ALAARKIKAKAQMIAAHMLEVHEGDLEWDV 579 (770)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHEEEEC
Confidence 0 0112233344444888899998876554
No 63
>PRK13904 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=79.78 E-value=11 Score=40.69 Aligned_cols=146 Identities=11% Similarity=0.112 Sum_probs=87.8
Q ss_pred cceeeecCCcEEEccCCHHHHHHHHHhCCCCEEEecCcchhhhhhcCCCCCCeeecCCCCCCCCCceecCCeEEEccccc
Q psy14046 163 EYLQIRGPRATWYRPQTLTQLLELKAKFPEAKLVVGNSEIGVEVKFKKFFYPVLIQPSLIPELTQPRVEENGVWIGGATS 242 (857)
Q Consensus 163 ~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vT 242 (857)
.++.+.|+.--|+.|.+.+ + .-...++.||+-+++. +.....+| + ..+++.++.+++.|++||++.
T Consensus 11 tt~~iGG~A~~~~~~~~~~-l------~~p~~vlG~GSNlLv~----D~g~~~vv-~--~~~~~~~~~~~~~v~~~AG~~ 76 (257)
T PRK13904 11 SSVKIGPPLEVLVLEEIDD-F------SQDGQIIGGANNLLIS----PNPKNLAI-L--GKNFDYIKIDGECLEIGGATK 76 (257)
T ss_pred CceeECceEEEEEEechhh-h------CCCeEEEeceeEEEEe----cCCccEEE-E--ccCcCeEEEeCCEEEEEcCCc
Confidence 4577777766688888887 4 2247789999998873 22234555 2 235777888888999999999
Q ss_pred HHHHHHHHHHHhhhcCCchhhhHHHHHHHHHhhcCHhhhcceeccCcccc-cCCC-CCHHHHHhhcCcEEEEEEcCCCeE
Q psy14046 243 LNDMRAILSEQIEKLPSHKSRVYVAIVEMLHWFAGNQIRNVAAIGGNIMT-GSPI-SDMNPILMAARCRLLLESKAEGTR 320 (857)
Q Consensus 243 l~~l~~~l~~~~~~~p~~~~~~~~~L~~a~~~ias~qIRN~aTiGGNI~~-asp~-sDl~p~LlAldA~v~l~s~~~G~R 320 (857)
+.++.....+. .+.. +.+.++. =|||||-+.+ |--. .++.-++. +|++. + .
T Consensus 77 l~~l~~~~~~~----------gl~G----lE~l~gI----PGtVGGAv~mNaGa~g~ei~d~l~----~V~~~---~--~ 129 (257)
T PRK13904 77 SGKIFNYAKKN----------NLGG----FEFLGKL----PGTLGGLVKMNAGLKEYEISNNLE----SICTN---G--G 129 (257)
T ss_pred HHHHHHHHHHC----------CCch----hhhhcCC----CccHHHHHHhcCCcCccchheeEE----EEEEE---e--e
Confidence 99999875431 1111 1222222 2566666542 2211 22221121 12222 2 2
Q ss_pred EEEcccccccccccccCCCCcEEEEEEecCCC
Q psy14046 321 EVTMDGSFYTSYRKNIVRPDEVLRAIYIPHTA 352 (857)
Q Consensus 321 ~vpl~e~F~~g~~~t~L~~~EiI~~I~iP~~~ 352 (857)
+++-+| .--+||...++ .+|++..+-..+
T Consensus 130 ~~~~~e-~~f~YR~S~~~--~iIl~a~f~l~~ 158 (257)
T PRK13904 130 WIEKED-IGFGYRSSGIN--GVILEARFKKTH 158 (257)
T ss_pred EEeHHH-CcccccCcCCC--cEEEEEEEEECC
Confidence 567777 66688888775 388888776553
No 64
>TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit. This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=78.14 E-value=3.6 Score=51.25 Aligned_cols=94 Identities=13% Similarity=0.137 Sum_probs=62.3
Q ss_pred CCCceEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCCEEEEec------ccCCCCCCCCCCCccccCeEE
Q psy14046 714 ETNVSVAVPKLEDGCMEIFVSSQHP-----SEIQEMTAHALGVPSNRIVAKTK------RLGGGFGGKEKLQSELYGLFT 782 (857)
Q Consensus 714 Ep~~~~a~~~~~~~~l~v~~stQ~p-----~~~~~~vA~~Lglp~~~V~V~~~------~~GGgFGgK~~~~~~~yG~i~ 782 (857)
.+.++..... .||.++|+++++.. +.+++.+|+.||+|+++|+|... .-+|.+|.+.+...- .
T Consensus 443 ~~~~a~v~l~-~dG~v~v~~g~~e~GqG~~T~~~qiaAe~LGip~d~V~v~~~DT~~~p~~~gt~~Sr~t~~~G---~-- 516 (746)
T TIGR03194 443 PHATVALKLD-FDGGITLLTGAADIGQGSSTIASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVG---N-- 516 (746)
T ss_pred CCceEEEEEc-CCccEEEEEcCCCCCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCChhHhHHHHHH---H--
Confidence 3556666663 68899999887644 45678899999999999999864 356677766543210 0
Q ss_pred EEe-hhHHHHHHHHHHHHHHcCCCHHHHHHhc
Q psy14046 783 EVR-EDDWIAETMGHHVAQFLKLDYADFARSN 813 (857)
Q Consensus 783 ~~r-q~~~a~E~~id~iA~~lg~DP~e~R~~N 813 (857)
.++ -+.-+.|.+.+..|+.||.+|.+++..|
T Consensus 517 Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~ 548 (746)
T TIGR03194 517 AAIDAAEELKGVLVAAAAKKLDAREEDIECAG 548 (746)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHEEEEC
Confidence 000 0122234444555889999998887665
No 65
>PRK09800 putative hypoxanthine oxidase; Provisional
Probab=75.11 E-value=7.1 Score=49.95 Aligned_cols=86 Identities=21% Similarity=0.368 Sum_probs=81.9
Q ss_pred CCCceEEEcCcCCCCCCCCcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHhCCCCCCHHHHHHHHhCCcccCCCChhHHH
Q psy14046 1 MHGLAVTTVEGIGSTKTKLHPVQERLAKAHGSQCGFCTPGIVMSMYALLRSLPGKPTMKDMEVALQGNLCRCTGYRPILE 80 (857)
Q Consensus 1 ~~g~~i~Tveg~~~~~~~~~~iq~~~~~~~~~qCGfCtpg~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCrCtgy~~i~~ 80 (857)
++|++|+|||||+. .+.|||||++|+++|++|||||||||||++++||+++|. ||++||+++|+|||||||||++|++
T Consensus 66 ~~g~~i~Tvegl~~-~~~~~~~q~af~~~~~~QCG~CtpG~~m~~~~ll~~~~~-p~~~~i~~~l~gnlCRCtgy~~i~~ 143 (956)
T PRK09800 66 LEKADIRTAESLGK-WNELSLVQQAMVDVGVVQSGYNDPAAALIITDLLDRIAA-PTREEIDDALSGLFSRDAGWQQYYQ 143 (956)
T ss_pred cCCCEEEecCCcCC-CCCCCHHHHHHHHcCCCcCCCChHHHHHHHHHHHhcCCC-CCHHHHHHHHhhchhccCCcHHHHH
Confidence 58999999999986 568999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHh
Q psy14046 81 GFKTFTEE 88 (857)
Q Consensus 81 a~~~~~~~ 88 (857)
|++.++..
T Consensus 144 av~~~~~~ 151 (956)
T PRK09800 144 VIELAVAR 151 (956)
T ss_pred HHHHHHHh
Confidence 99988764
No 66
>TIGR03313 Se_sel_red_Mo probable selenate reductase, molybdenum-binding subunit. Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity.
Probab=72.81 E-value=8.5 Score=49.27 Aligned_cols=86 Identities=23% Similarity=0.385 Sum_probs=81.8
Q ss_pred CCCceEEEcCcCCCCCCCCcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHhCCCCCCHHHHHHHHhCCcccCCCChhHHH
Q psy14046 1 MHGLAVTTVEGIGSTKTKLHPVQERLAKAHGSQCGFCTPGIVMSMYALLRSLPGKPTMKDMEVALQGNLCRCTGYRPILE 80 (857)
Q Consensus 1 ~~g~~i~Tveg~~~~~~~~~~iq~~~~~~~~~qCGfCtpg~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCrCtgy~~i~~ 80 (857)
++|++|+|||||+. ++.|||+|++|+++|++|||||||||||++++||+++|. |+++||+++|+|||||||||++|++
T Consensus 62 ~~g~~i~Tiegl~~-~~~~~~~q~af~~~~a~QCG~CtpG~~~~~~~ll~~~~~-p~~~~i~~~l~gnlcrctgy~~i~~ 139 (951)
T TIGR03313 62 LEGAEVRTAESLGQ-WNQLSLVQQAMVDVGVVQSGYNDPAAALILTDLLDRNTQ-PNRAEIDDALSGLFSRDAGYQQFYQ 139 (951)
T ss_pred cCCCEEEecCcCCC-CCCCCHHHHHHHHcCCCcCCCChHHHHHHHHHHHhcCCC-CCHHHHHHHHhcceeccCCcHHHHH
Confidence 58999999999986 568999999999999999999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHHHh
Q psy14046 81 GFKTFTEE 88 (857)
Q Consensus 81 a~~~~~~~ 88 (857)
|++.++..
T Consensus 140 av~~~~~~ 147 (951)
T TIGR03313 140 VIELAVKR 147 (951)
T ss_pred HHHHHHHh
Confidence 99987654
No 67
>TIGR03196 pucD xanthine dehydrogenase D subunit. This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin.
Probab=67.08 E-value=12 Score=46.83 Aligned_cols=88 Identities=13% Similarity=0.074 Sum_probs=57.0
Q ss_pred ceEEEEecCCC--eEEEEeCCCCh-----HHHHHHHHHHhCCCCCCEEEEe------cccCCCCCCCCCCCccccCeEEE
Q psy14046 717 VSVAVPKLEDG--CMEIFVSSQHP-----SEIQEMTAHALGVPSNRIVAKT------KRLGGGFGGKEKLQSELYGLFTE 783 (857)
Q Consensus 717 ~~~a~~~~~~~--~l~v~~stQ~p-----~~~~~~vA~~Lglp~~~V~V~~------~~~GGgFGgK~~~~~~~yG~i~~ 783 (857)
.+.+... .|| .++|+++++.. +.+.+.+|+.||+|.++|+|.. +.-+|.+|.+.+...- .
T Consensus 467 ~a~v~l~-~dGsv~v~v~~g~~d~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t~~~G---~--- 539 (768)
T TIGR03196 467 GARLELA-EDGTVKIRAHFACAECGQGFLAAAEQIAMEELGCAAEDISIAIADTAKGPKAGSSSASRGTSMSG---G--- 539 (768)
T ss_pred cEEEEEe-CCCCeEEEEEECCCCcCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCCchhhhhHhHH---H---
Confidence 4556664 567 48999877543 3456788999999999999985 4567778887654310 0
Q ss_pred EehhHHH----HHHHHHHHHHHcCCCHHHHHHhc
Q psy14046 784 VREDDWI----AETMGHHVAQFLKLDYADFARSN 813 (857)
Q Consensus 784 ~rq~~~a----~E~~id~iA~~lg~DP~e~R~~N 813 (857)
-..-| .+.+....|+.+|.+|.++...+
T Consensus 540 --Av~~Aa~~l~~kl~~~aa~~l~~~~~~~~~~~ 571 (768)
T TIGR03196 540 --AIQGACAAFAAQLKARAAETAGLPAEVVEAPA 571 (768)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhCCChhhEEEeC
Confidence 01222 33344444888898887765443
No 68
>PF02738 Ald_Xan_dh_C2: Molybdopterin-binding domain of aldehyde dehydrogenase; InterPro: IPR008274 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3NVZ_C 3NVY_C 1FO4_B 3NRZ_L 3AM9_A 3B9J_C 3AX7_B 3NVW_L 3BDJ_A 3ETR_N ....
Probab=63.16 E-value=8.8 Score=46.10 Aligned_cols=93 Identities=19% Similarity=0.298 Sum_probs=58.1
Q ss_pred CceEEEEecCCCeEEEEeCC----CChH-HHHHHHHHHhCCCCCCEEEEecc------cCCCCCCCCCCCccccCeEEEE
Q psy14046 716 NVSVAVPKLEDGCMEIFVSS----QHPS-EIQEMTAHALGVPSNRIVAKTKR------LGGGFGGKEKLQSELYGLFTEV 784 (857)
Q Consensus 716 ~~~~a~~~~~~~~l~v~~st----Q~p~-~~~~~vA~~Lglp~~~V~V~~~~------~GGgFGgK~~~~~~~yG~i~~~ 784 (857)
.++....+ .||.++|+++. |... .+.+.+|+.||+|+++|+|.... -+|.+|.+.+...- . .+
T Consensus 320 ~~a~v~l~-~DG~v~v~~~~~e~GqG~~T~~~qiaAe~Lgi~~~~V~v~~~dT~~~p~~~~t~gSr~t~~~g---~--Av 393 (547)
T PF02738_consen 320 SSARVRLN-PDGSVTVYTGGVEMGQGSRTALAQIAAEELGIPPEDVRVVSGDTDTTPYDGGTGGSRSTYMSG---N--AV 393 (547)
T ss_dssp EEEEEEE--TTS-EEEEES--BSSSSHHHHHHHHHHHHHTS-GGGEEEEECBTTTS-SB--S-TTTHHHHHH---H--HH
T ss_pred CcEEEEEE-eCCCEEEEEecccCCcchhhhHHHHHHHHhCCChhhEEEEeCCCcCCCCCCCCccchhhHhhH---H--HH
Confidence 45666664 78999999887 4444 56788899999999999997643 45566666542110 0 01
Q ss_pred e-hhHHHHHHHHHHHHHHcCCCHHHHHHhcC
Q psy14046 785 R-EDDWIAETMGHHVAQFLKLDYADFARSNL 814 (857)
Q Consensus 785 r-q~~~a~E~~id~iA~~lg~DP~e~R~~Nl 814 (857)
| -+.-+.|.++...|..++.+|.++..++-
T Consensus 394 ~~Aa~~lr~~l~~~Aa~~~~~~~~~l~~~~g 424 (547)
T PF02738_consen 394 RKAAEDLREKLLEIAAEILGVDPEDLELEDG 424 (547)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSGGGEECHCH
T ss_pred HHHHHHHHHHHHHHHHHhcccccchhhhhhh
Confidence 1 12344677788888999999887776654
No 69
>PF10437 Lip_prot_lig_C: Bacterial lipoate protein ligase C-terminus; InterPro: IPR019491 This is the C-terminal domain of a bacterial lipoate protein ligase. There is no conservation between this C terminus and that of vertebrate lipoate protein ligase C-termini, but both are associated with IPR004143 from INTERPRO, further upstream. This C-terminal domain is more stable than IPR004143 from INTERPRO and the hypothesis is that the C-terminal domain has a role in recognising the lipoyl domain and/or transferring the lipoyl group onto it from the lipoyl-AMP intermediate. C-terminal fragments of length 172 to 193 amino acid residues are observed in the eubacterial enzymes whereas in their archaeal counterparts the C-terminal segment is significantly smaller, ranging in size from 87 to 107 amino acid residues. ; PDB: 1X2G_A 3A7R_A 3A7A_A 1X2H_C 1VQZ_A 3R07_C.
Probab=62.07 E-value=39 Score=29.84 Aligned_cols=50 Identities=12% Similarity=0.343 Sum_probs=38.2
Q ss_pred eEEEEEeecCCceEEeEeEEEEecCCCcceeHHHHHHHHhCCCCCHHHHHHHHHHH
Q psy14046 376 AFNVTLDIQSDGAVVKDCEFAFGGMAPTTVLAKKTTEQMINKPWNQSLLEDTWRNL 431 (857)
Q Consensus 376 A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l 431 (857)
.+.+.++ +| +|++++|.=--++... ..++|+.|.|.+++.+.+.+++..+
T Consensus 19 ~v~~~V~--~G--~I~~i~i~gDf~~~~~--i~~le~~L~G~~~~~~~i~~~l~~~ 68 (86)
T PF10437_consen 19 EVHLNVK--NG--IIKDIKIYGDFFGPED--IEELEEALIGCPYDREAIKEALNSV 68 (86)
T ss_dssp EEEEEEE--TT--EEEEEEEEECBS-CCC--HHHHHHHHTTCBSSHHHHHHHHHHC
T ss_pred EEEEEEE--CC--EEEEEEEECCCCCchH--HHHHHHHHHhcCCCHHHHHHHHHHh
Confidence 4444554 67 9999999644444443 7889999999999999999988876
No 70
>KOG1759|consensus
Probab=54.13 E-value=39 Score=31.84 Aligned_cols=69 Identities=16% Similarity=0.245 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhCCCCCCEEEEe-cccCCCCCCCCCCCccccCeEEEEe-----hhHHHHHHHHHHHHHHcCCCHHHH
Q psy14046 739 SEIQEMTAHALGVPSNRIVAKT-KRLGGGFGGKEKLQSELYGLFTEVR-----EDDWIAETMGHHVAQFLKLDYADF 809 (857)
Q Consensus 739 ~~~~~~vA~~Lglp~~~V~V~~-~~~GGgFGgK~~~~~~~yG~i~~~r-----q~~~a~E~~id~iA~~lg~DP~e~ 809 (857)
..+-..+|+++|.|+++|-|+. ..++=+|||+.+.... +.|+.++ +..--...+-+-+.++|++||.-|
T Consensus 21 ~elt~~lAkimgkP~~~i~V~l~~~~~i~fggt~eP~A~--~~l~Sig~v~~~~N~~~sa~l~~il~~~L~l~~~rv 95 (115)
T KOG1759|consen 21 KELTKALAKIMGKPEDYIMVELAGGVRIAFGGTTEPAAY--ASLKSIGGVGAIVNRSYSAALTEILEKELSLDPDRV 95 (115)
T ss_pred HHHHHHHHHHhCCChhhEEEEecCCceEeccCCCCccEE--EEEEeccccChhHhHHHHHHHHHHHHHHhCCCCCeE
Confidence 3456789999999999999987 4566699999886554 2333222 222223444556788999998544
No 71
>TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1. Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme.
Probab=43.68 E-value=64 Score=41.03 Aligned_cols=85 Identities=41% Similarity=0.747 Sum_probs=80.3
Q ss_pred CCCceEEEcCcCCCCCCCCcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHhCCCCCCHHHHHHHHhCCcccCCCChhHHH
Q psy14046 1 MHGLAVTTVEGIGSTKTKLHPVQERLAKAHGSQCGFCTPGIVMSMYALLRSLPGKPTMKDMEVALQGNLCRCTGYRPILE 80 (857)
Q Consensus 1 ~~g~~i~Tveg~~~~~~~~~~iq~~~~~~~~~qCGfCtpg~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCrCtgy~~i~~ 80 (857)
++|++|+|||||++ ..+||||++|+++|++|||||||||||++++||+++|. |++++|+++|+|||||||||++|++
T Consensus 62 ~~g~~i~T~egl~~--~~~~~~q~a~~~~~~~qcG~ctpg~~~~~~~ll~~~~~-p~~~~i~~~l~gnlcrctgy~~i~~ 138 (848)
T TIGR03311 62 LAGKEITTVEGLTE--REKDVYAWAFAKAGAVQCGFCIPGMVISAKALLDKNPN-PTEAEIKKALKGNICRCTGYVKIIK 138 (848)
T ss_pred cCCCEEEecCCCCC--CCCCHHHHHHHHcCCCcCCCCchhHHHHHHHHHhcCCC-CCHHHHHHHHhcCccccCChHHHHH
Confidence 58999999999985 34799999999999999999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHHHh
Q psy14046 81 GFKTFTEE 88 (857)
Q Consensus 81 a~~~~~~~ 88 (857)
|++.++..
T Consensus 139 a~~~~~~~ 146 (848)
T TIGR03311 139 AVRLAAKA 146 (848)
T ss_pred HHHHHHHh
Confidence 99988664
No 72
>TIGR02969 mam_aldehyde_ox aldehyde oxidase. Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.
Probab=38.40 E-value=75 Score=42.46 Aligned_cols=59 Identities=8% Similarity=0.122 Sum_probs=44.7
Q ss_pred CCCCceEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCCEEEEec------ccCCCCCCCCC
Q psy14046 713 LETNVSVAVPKLEDGCMEIFVSSQHP-----SEIQEMTAHALGVPSNRIVAKTK------RLGGGFGGKEK 772 (857)
Q Consensus 713 mEp~~~~a~~~~~~~~l~v~~stQ~p-----~~~~~~vA~~Lglp~~~V~V~~~------~~GGgFGgK~~ 772 (857)
+...++++... .||.++|+++++.. +.+.+.+|+.||||.++|+|... ..+|.+|.+.+
T Consensus 1015 ~~~~~a~v~i~-~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~gSr~t 1084 (1330)
T TIGR02969 1015 MGQAAALVHIY-LDGSVLVTHGGIEMGQGVHTKMIQVVSRELKMPMSNVHLRGTSTETVPNTNASGGSVVA 1084 (1330)
T ss_pred CCCccEEEEEc-CCceEEEEECCcCcCCChHHHHHHHHHHHhCCCHHHEEEEcCCCCCCCCCCCCchHHHH
Confidence 44566777764 68899999998644 34577889999999999999854 44777777765
No 73
>PLN02906 xanthine dehydrogenase
Probab=37.03 E-value=75 Score=42.49 Aligned_cols=60 Identities=8% Similarity=0.123 Sum_probs=44.4
Q ss_pred CCCCceEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCCEEEEe------cccCCCCCCCCCC
Q psy14046 713 LETNVSVAVPKLEDGCMEIFVSSQHP-----SEIQEMTAHALGVPSNRIVAKT------KRLGGGFGGKEKL 773 (857)
Q Consensus 713 mEp~~~~a~~~~~~~~l~v~~stQ~p-----~~~~~~vA~~Lglp~~~V~V~~------~~~GGgFGgK~~~ 773 (857)
+.+..+..... .||.++|+++++.. +.+.+.+|+.||+|.++|+|.. +..+|.+|.+.+.
T Consensus 1010 ~~~~~a~V~i~-~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~d~V~v~~~DT~~~p~~~gT~aSr~t~ 1080 (1319)
T PLN02906 1010 MNQAGALVHVY-TDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFISETSTDKVPNASPTAASASSD 1080 (1319)
T ss_pred CCccceEEEEc-CCceEEEEECCccCCCChHHHHHHHHHHHHCCCHHHEEEEccCCCCCCCCCCCccchhhH
Confidence 44556766663 68899999977433 3456788999999999999985 4557788887653
No 74
>PRK01964 4-oxalocrotonate tautomerase; Provisional
Probab=32.67 E-value=37 Score=28.05 Aligned_cols=31 Identities=26% Similarity=0.471 Sum_probs=24.0
Q ss_pred HHHHHHHHHhCCCCCCEEEEecccCC---CCCCC
Q psy14046 740 EIQEMTAHALGVPSNRIVAKTKRLGG---GFGGK 770 (857)
Q Consensus 740 ~~~~~vA~~Lglp~~~V~V~~~~~GG---gFGgK 770 (857)
.+.+.+++.||+|++.|.|......- ||||+
T Consensus 23 ~it~~l~~~lg~p~~~v~V~i~e~~~~~w~~gg~ 56 (64)
T PRK01964 23 EVTEAISATLDVPKERVRVIVNEVPSSHWGVAGV 56 (64)
T ss_pred HHHHHHHHHhCcChhhEEEEEEEcChHHeeECCE
Confidence 44578899999999999998865544 56665
No 75
>COG0245 IspF 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Lipid metabolism]
Probab=26.35 E-value=83 Score=31.36 Aligned_cols=34 Identities=29% Similarity=0.538 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhCCCCCCEEEEecccCC-CCCCCCC
Q psy14046 739 SEIQEMTAHALGVPSNRIVAKTKRLGG-GFGGKEK 772 (857)
Q Consensus 739 ~~~~~~vA~~Lglp~~~V~V~~~~~GG-gFGgK~~ 772 (857)
..+|..+|++|++|.++|.|..+..=+ ||=|+..
T Consensus 110 ~amr~~ia~~L~i~~~~invKatT~E~LGf~Gr~e 144 (159)
T COG0245 110 EAMRANIAELLGIPVDRINVKATTTEKLGFTGRGE 144 (159)
T ss_pred HHHHHHHHHHhCCCchheEEEEeccCccccccccC
Confidence 467999999999999999998876554 7755543
No 76
>PF03851 UvdE: UV-endonuclease UvdE; InterPro: IPR004601 Schizosaccharomyces pombe ultraviolet damage endonuclease (UVDE or Uve1p) performs the initial step in an alternative excision repair pathway for UV-induced DNA damage. This DNA repair pathway was originally thought to be specific for UV damage, however Uve1p also recognises UV-induced bipyrimidine photoadducts and other non-UV-induced DNA adducts []. The Deinococcus radiodurans UVSE protein has also shown to be a UV DNA damage endonuclease that catalyzes repair of UV-induced DNA damage by a similar mechanism [].; GO: 0004519 endonuclease activity, 0006289 nucleotide-excision repair, 0009411 response to UV; PDB: 3BZG_A 3BZJ_A 3C0L_A 3C0S_A 3C0Q_A.
Probab=25.63 E-value=1.1e+02 Score=33.43 Aligned_cols=62 Identities=16% Similarity=0.208 Sum_probs=31.0
Q ss_pred CCChHHHHHH---------HHHHhCCCCC---CEEEEecccCCCCCCCCCCCccccCeEEEEehhHHHHHHHHHHHHHHc
Q psy14046 735 SQHPSEIQEM---------TAHALGVPSN---RIVAKTKRLGGGFGGKEKLQSELYGLFTEVREDDWIAETMGHHVAQFL 802 (857)
Q Consensus 735 tQ~p~~~~~~---------vA~~Lglp~~---~V~V~~~~~GGgFGgK~~~~~~~yG~i~~~rq~~~a~E~~id~iA~~l 802 (857)
+..|..++.+ +...||++.. +|.+| +||.||.|. -++|.+++..
T Consensus 115 Sp~~~Vv~~si~~L~yH~~~Ld~mg~~~~~~~~i~IH---~GG~YgdK~-----------------~al~RF~~~~---- 170 (275)
T PF03851_consen 115 SPREEVVENSIRDLEYHARLLDLMGLDDSPDHKINIH---VGGVYGDKE-----------------AALERFIENF---- 170 (275)
T ss_dssp -SSHHHHHHHHHHHHHHHHHHHHTT-TT----EEEEE-------SS-HH-----------------HHHHHHHHHH----
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCcccccEEEEe---eCCCCCChH-----------------HHHHHHHHHH----
Confidence 3456666544 5567999885 55555 699999995 3356655444
Q ss_pred CCCHHHHHHhcCCcCCCc
Q psy14046 803 KLDYADFARSNLFVTGNL 820 (857)
Q Consensus 803 g~DP~e~R~~Nl~~~g~~ 820 (857)
..=|..+|.+-.++..|.
T Consensus 171 ~~L~~~ir~rL~lENDd~ 188 (275)
T PF03851_consen 171 KRLPESIRKRLTLENDDK 188 (275)
T ss_dssp HT--HHHHTTEEEE--SS
T ss_pred hhCCHhhhhcEEEecCCC
Confidence 334778887766654443
No 77
>cd00491 4Oxalocrotonate_Tautomerase 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.
Probab=25.14 E-value=72 Score=25.46 Aligned_cols=31 Identities=29% Similarity=0.569 Sum_probs=22.7
Q ss_pred HHHHHHHHHhCCCCCCEEEEecccCC---CCCCC
Q psy14046 740 EIQEMTAHALGVPSNRIVAKTKRLGG---GFGGK 770 (857)
Q Consensus 740 ~~~~~vA~~Lglp~~~V~V~~~~~GG---gFGgK 770 (857)
.+.+.+++.||+|++.|.|....+.- ||||+
T Consensus 22 ~i~~~l~~~~g~~~~~v~V~i~e~~~~~~~~gg~ 55 (58)
T cd00491 22 RVTEAVSEILGAPEATIVVIIDEMPKENWGIGGE 55 (58)
T ss_pred HHHHHHHHHhCcCcccEEEEEEEeCchhceECCE
Confidence 34577788899999999998765433 55554
No 78
>PF13046 DUF3906: Protein of unknown function (DUF3906)
Probab=23.90 E-value=1.1e+02 Score=25.91 Aligned_cols=18 Identities=28% Similarity=0.051 Sum_probs=15.4
Q ss_pred EEEEEECCHHHHHHHhcc
Q psy14046 635 IGGVIAEDQLIAQRAAAL 652 (857)
Q Consensus 635 Va~VvAet~~~A~~Aa~~ 652 (857)
.++|+|+|.++|.++++.
T Consensus 16 ~viv~Ae~ee~AF~~~e~ 33 (64)
T PF13046_consen 16 PVIVAAENEEQAFRLVEV 33 (64)
T ss_pred EEEEEecCHHHHHHHHHH
Confidence 489999999999988763
No 79
>PTZ00397 macrophage migration inhibition factor-like protein; Provisional
Probab=23.82 E-value=72 Score=29.79 Aligned_cols=31 Identities=29% Similarity=0.413 Sum_probs=25.1
Q ss_pred HHHHHHHHhCCCCCCEEEEecccCC---CCCCCC
Q psy14046 741 IQEMTAHALGVPSNRIVAKTKRLGG---GFGGKE 771 (857)
Q Consensus 741 ~~~~vA~~Lglp~~~V~V~~~~~GG---gFGgK~ 771 (857)
+-+.+++.||+|+++|.|....+.- ||||+.
T Consensus 81 i~~~l~~~lgi~~~rv~I~f~~~~~~~w~~~G~~ 114 (116)
T PTZ00397 81 ITKILASHLKVKSERVYIEFKDCSAQNWAFNGST 114 (116)
T ss_pred HHHHHHHHhCcCcccEEEEEEECChhheeEccee
Confidence 3467788899999999999887766 777764
No 80
>TIGR00013 taut 4-oxalocrotonate tautomerase family enzyme. 4-oxalocrotonate tautomerase is a homohexamer in which each monomer is very small, at about 62 amino acids. Pro-1 of the mature protein serves as a general base. The enzyme functions in meta-cleavage pathways of aromatic hydrocarbon catabolism. Because several Arg residues located near the active site in the crystal structure of Pseudomonas putida are not conserved among all members of this family, because the literature describes a general role in the isomerization of beta,gamma-unsaturated enones to their alpha,beta-isomers, and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.
Probab=23.23 E-value=80 Score=25.75 Aligned_cols=32 Identities=28% Similarity=0.432 Sum_probs=23.5
Q ss_pred HHHHHHHHHhCCCCCCEEEEecccCC---CCCCCC
Q psy14046 740 EIQEMTAHALGVPSNRIVAKTKRLGG---GFGGKE 771 (857)
Q Consensus 740 ~~~~~vA~~Lglp~~~V~V~~~~~GG---gFGgK~ 771 (857)
.+.+.+++.||+|++.|.|....+-- ||||+.
T Consensus 23 ~it~~l~~~lg~~~~~v~V~i~e~~~~~w~~gG~~ 57 (63)
T TIGR00013 23 GVTEAMAETLGANLESIVVIIDEMPKNNYGIGGEL 57 (63)
T ss_pred HHHHHHHHHhCCCcccEEEEEEEcCHHHeeECCEE
Confidence 34577888999999999998865433 556553
No 81
>PLN00192 aldehyde oxidase
Probab=22.82 E-value=2.7e+02 Score=37.46 Aligned_cols=59 Identities=19% Similarity=0.209 Sum_probs=42.2
Q ss_pred CCCCceEEEEecCCCeEEEEeCCCCh----H-HHHHHHHHHhCC--------CCCCEEEEec------ccCCCCCCCCC
Q psy14046 713 LETNVSVAVPKLEDGCMEIFVSSQHP----S-EIQEMTAHALGV--------PSNRIVAKTK------RLGGGFGGKEK 772 (857)
Q Consensus 713 mEp~~~~a~~~~~~~~l~v~~stQ~p----~-~~~~~vA~~Lgl--------p~~~V~V~~~------~~GGgFGgK~~ 772 (857)
+-+..+++... .||.++|+++.+.. + .+.+.+|+.||+ |.++|+|... ..+|.+|.+.+
T Consensus 1028 ~~~~~a~v~i~-~DGsv~v~~G~~e~GQG~~T~~aQiaA~~LGi~~~~~~~ip~e~I~v~~~dT~~~p~~~~t~gSr~t 1105 (1344)
T PLN00192 1028 LRPTPGKVSIL-SDGSIAVEVGGIEIGQGLWTKVKQMAAFGLGMIKCDGGEDLLDKIRVIQSDTLSMIQGGFTAGSTTS 1105 (1344)
T ss_pred ccCCceEEEEe-CCceEEEEECCCCCCCCHHHHHHHHHHHHhCCccccccCCChhhEEEEecCCCCCCCCCCCchhhhH
Confidence 33456666663 58899999998543 3 456778999995 9999999753 45667777754
No 82
>PRK02220 4-oxalocrotonate tautomerase; Provisional
Probab=21.92 E-value=70 Score=25.97 Aligned_cols=32 Identities=19% Similarity=0.441 Sum_probs=23.8
Q ss_pred HHHHHHHHHhCCCCCCEEEEecccCC---CCCCCC
Q psy14046 740 EIQEMTAHALGVPSNRIVAKTKRLGG---GFGGKE 771 (857)
Q Consensus 740 ~~~~~vA~~Lglp~~~V~V~~~~~GG---gFGgK~ 771 (857)
.+.+.+++.+|+|++.|.|....+-- ||||+.
T Consensus 23 ~it~~l~~~~~~p~~~v~V~i~e~~~~~~~~gG~~ 57 (61)
T PRK02220 23 DVTAAVSKNTGAPAEHIHVIINEMSKNHYAVGGKR 57 (61)
T ss_pred HHHHHHHHHhCcChhhEEEEEEEeChhHeEECCEE
Confidence 45578899999999999998764433 556654
No 83
>PF06971 Put_DNA-bind_N: Putative DNA-binding protein N-terminus; InterPro: IPR009718 This entry represents the C terminus (approximately 30 residues) of a number of Rex proteins. These are redox-sensing repressors that appear to be widespread among Gram-positive bacteria []. They modulate transcription in response to changes in cellular NADH/NAD(+) redox state. Rex is predicted to include a pyridine nucleotide-binding domain (Rossmann fold), and residues that might play key structural and nucleotide binding roles are highly conserved.; GO: 0045892 negative regulation of transcription, DNA-dependent, 0051775 response to redox state, 0005737 cytoplasm; PDB: 3IL2_B 3IKT_A 3IKV_B 1XCB_F 2DT5_A 2VT3_A 2VT2_A 3KEO_B 3KET_A 3KEQ_A ....
Probab=20.06 E-value=84 Score=25.21 Aligned_cols=16 Identities=19% Similarity=0.279 Sum_probs=13.6
Q ss_pred HHHHHHcCCCHHHHHH
Q psy14046 796 HHVAQFLKLDYADFAR 811 (857)
Q Consensus 796 d~iA~~lg~DP~e~R~ 811 (857)
.++|+.+|++|..+|+
T Consensus 32 ~~La~~~gi~~~qVRK 47 (50)
T PF06971_consen 32 QELAEALGITPAQVRK 47 (50)
T ss_dssp HHHHHHHTS-HHHHHH
T ss_pred HHHHHHHCCCHHHhcc
Confidence 5899999999999996
Done!