Query psy14054
Match_columns 311
No_of_seqs 181 out of 1246
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 18:24:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14054.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14054hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nvz_C Xanthine dehydrogenase/ 100.0 1.4E-68 4.7E-73 546.4 33.0 285 24-310 239-523 (755)
2 2w3s_B Xanthine dehydrogenase; 100.0 3.3E-67 1.1E-71 538.1 34.6 286 23-310 238-543 (777)
3 3unc_A Xanthine dehydrogenase/ 100.0 1.3E-65 4.6E-70 548.1 33.1 285 24-310 809-1093(1332)
4 1rm6_A 4-hydroxybenzoyl-COA re 100.0 2.9E-65 9.8E-70 523.6 31.5 278 23-310 254-536 (769)
5 1t3q_B Quinoline 2-oxidoreduct 100.0 4.3E-65 1.5E-69 523.4 29.4 280 23-310 264-560 (788)
6 1ffv_B CUTL, molybdoprotein of 100.0 2.1E-65 7.2E-70 526.3 27.0 287 22-310 276-577 (803)
7 1vlb_A Aldehyde oxidoreductase 100.0 4.2E-64 1.5E-68 521.9 34.0 279 24-310 430-711 (907)
8 1dgj_A Aldehyde oxidoreductase 100.0 4.2E-64 1.5E-68 521.9 33.9 279 24-310 432-713 (907)
9 1n62_B Carbon monoxide dehydro 100.0 9.1E-65 3.1E-69 522.3 27.5 287 22-310 279-583 (809)
10 3zyv_A AOH1; oxidoreductase, m 100.0 3.2E-63 1.1E-67 531.9 33.0 285 24-310 814-1098(1335)
11 3hrd_A Nicotinate dehydrogenas 100.0 1E-42 3.5E-47 335.1 20.3 167 24-192 248-415 (425)
12 3hrd_B Nicotinate dehydrogenas 99.9 8.7E-22 3E-26 183.3 11.9 99 211-310 2-100 (330)
13 3hrd_A Nicotinate dehydrogenas 91.0 0.33 1.1E-05 46.1 6.2 57 232-299 187-243 (425)
14 3hrd_B Nicotinate dehydrogenas 89.4 0.76 2.6E-05 42.0 7.1 34 233-266 186-224 (330)
15 3nvz_C Xanthine dehydrogenase/ 86.6 1.3 4.4E-05 45.1 7.3 58 232-300 175-233 (755)
16 1rm6_A 4-hydroxybenzoyl-COA re 86.1 1.6 5.5E-05 44.5 7.8 58 232-300 192-250 (769)
17 1t3q_B Quinoline 2-oxidoreduct 85.9 1.5 5E-05 44.9 7.4 58 232-300 202-260 (788)
18 2w3s_B Xanthine dehydrogenase; 85.5 1.5 5.1E-05 44.8 7.2 56 232-299 177-232 (777)
19 1vlb_A Aldehyde oxidoreductase 84.7 1.6 5.4E-05 45.4 7.1 58 232-300 369-426 (907)
20 1ffv_B CUTL, molybdoprotein of 84.6 1.7 6E-05 44.5 7.2 59 231-300 214-273 (803)
21 1n62_B Carbon monoxide dehydro 83.5 2.1 7E-05 44.0 7.2 58 231-299 217-275 (809)
22 1dgj_A Aldehyde oxidoreductase 82.7 2.5 8.4E-05 44.0 7.5 57 232-299 370-427 (907)
23 1n91_A ORF, hypothetical prote 81.9 3.1 0.00011 31.5 5.9 46 242-287 34-79 (108)
24 3unc_A Xanthine dehydrogenase/ 80.7 3.1 0.00011 45.1 7.5 58 232-300 745-803 (1332)
25 3zyv_A AOH1; oxidoreductase, m 79.1 4 0.00014 44.2 7.8 57 232-299 750-807 (1335)
26 2nlv_A XISI protein-like; XISI 72.7 5.1 0.00017 30.5 4.7 42 234-285 56-101 (112)
27 2nwv_A XISI protein-like; YP_3 71.1 5.7 0.0002 30.3 4.7 42 234-285 58-103 (114)
28 3d7q_A XISI protein-like; stru 67.8 8.1 0.00028 29.4 4.9 40 234-283 56-99 (112)
29 3m20_A 4-oxalocrotonate tautom 67.6 2.8 9.5E-05 27.9 2.1 26 261-286 20-45 (62)
30 3djh_A Macrophage migration in 66.7 1.8 6E-05 32.9 1.0 27 261-287 77-103 (114)
31 3fwu_A Macrophage migration in 63.1 3.9 0.00013 32.0 2.4 25 261-285 99-123 (133)
32 3kan_A D-dopachrome tautomeras 62.9 2.9 9.8E-05 31.9 1.6 37 261-299 78-114 (117)
33 3b64_A Macrophage migration in 62.6 4.9 0.00017 30.0 2.9 26 261-286 78-103 (112)
34 3m21_A Probable tautomerase HP 59.2 4 0.00014 27.5 1.6 26 261-286 24-49 (67)
35 3fwt_A Macrophage migration in 59.1 4 0.00014 31.9 1.8 26 261-286 99-124 (133)
36 3t5s_A Gilaa.00834.A, macropha 58.1 5.6 0.00019 31.2 2.5 30 258-287 96-125 (135)
37 2xcz_A Possible ATLS1-like lig 56.7 4.7 0.00016 30.3 1.8 28 260-287 77-104 (115)
38 2os5_A Acemif; macrophage migr 54.4 5.4 0.00018 30.2 1.8 27 261-287 78-104 (119)
39 2aal_A Malonate semialdehyde d 54.1 5.7 0.00019 30.6 1.9 40 261-302 86-125 (131)
40 1uiz_A MIF, macrophage migrati 53.8 4.6 0.00016 30.3 1.3 27 261-287 78-104 (115)
41 3abf_A 4-oxalocrotonate tautom 53.8 3.9 0.00013 27.0 0.8 26 261-286 22-47 (64)
42 1hfo_A Migration inhibitory fa 53.4 4.7 0.00016 30.1 1.3 26 261-286 77-102 (113)
43 4dh4_A MIF; trimer, isomerase; 53.2 4.7 0.00016 30.3 1.3 27 261-287 78-104 (114)
44 2wkb_A Macrophage migration in 53.1 5.5 0.00019 30.5 1.7 28 260-287 77-104 (125)
45 2opa_A Probable tautomerase YW 52.9 4.4 0.00015 26.4 1.0 26 261-286 21-46 (61)
46 2nvm_A FDXN element excision c 50.8 19 0.00064 27.9 4.3 40 234-283 70-113 (126)
47 3ej9_B Beta-subunit of trans-3 50.8 6.5 0.00022 27.2 1.5 25 261-285 21-45 (70)
48 1otf_A 4-oxalocrotonate tautom 49.3 4.3 0.00015 26.5 0.4 26 261-286 21-46 (62)
49 3mb2_A 4-oxalocrotonate tautom 49.3 4.9 0.00017 27.5 0.8 26 261-286 22-47 (72)
50 3ry0_A Putative tautomerase; o 48.1 5.8 0.0002 26.5 1.0 26 261-286 21-46 (65)
51 3ej9_A Alpha-subunit of trans- 45.9 5.2 0.00018 27.9 0.4 26 261-286 22-47 (76)
52 1mww_A Hypothetical protein HI 42.9 7 0.00024 30.0 0.8 27 260-286 79-105 (128)
53 2x4k_A 4-oxalocrotonate tautom 42.5 8.6 0.00029 24.9 1.1 27 260-286 23-49 (63)
54 2v4i_A Glutamate N-acetyltrans 42.4 28 0.00095 28.5 4.4 37 246-282 62-103 (173)
55 2lfc_A Fumarate reductase, fla 40.2 15 0.00052 29.3 2.5 17 144-160 98-114 (160)
56 3mb2_B 4-oxalocrotonate tautom 40.0 19 0.00064 24.9 2.5 26 260-285 22-47 (72)
57 1gyx_A YDCE, B1461, hypothetic 38.8 15 0.00051 25.3 1.9 27 260-286 21-47 (76)
58 1iv3_A 2-C-methyl-D-erythritol 35.7 58 0.002 26.0 5.1 42 247-289 97-138 (152)
59 3mlc_A FG41 malonate semialdeh 34.6 10 0.00034 29.7 0.5 40 261-303 86-125 (136)
60 1t0a_A 2C-methyl-D-erythritol 32.8 58 0.002 26.2 4.7 40 248-288 100-139 (159)
61 1vra_A Arginine biosynthesis b 32.6 32 0.0011 29.0 3.3 37 246-282 93-134 (208)
62 2pmp_A 2-C-methyl-D-erythritol 32.2 60 0.002 26.2 4.7 41 247-288 100-140 (160)
63 2l9f_A CALE8, meacp; transfera 31.7 36 0.0012 25.4 3.1 28 254-281 10-37 (102)
64 1gx1_A 2-C-methyl-D-erythritol 31.7 62 0.0021 26.1 4.7 41 247-288 98-138 (160)
65 3re3_A 2-C-methyl-D-erythritol 31.0 62 0.0021 26.1 4.6 35 253-288 109-143 (162)
66 3f0d_A 2-C-methyl-D-erythritol 29.8 50 0.0017 27.2 3.9 35 253-288 126-160 (183)
67 3n4h_A Putative tautomerase; C 25.8 31 0.001 27.0 2.0 26 261-286 83-108 (148)
68 3plu_A Ubiquitin-like modifier 24.5 1.1E+02 0.0039 22.1 4.7 47 233-283 19-67 (93)
69 2os5_A Acemif; macrophage migr 24.4 79 0.0027 23.4 4.1 29 256-284 16-44 (119)
70 1jrm_A MTH0637, conserved hypo 23.3 43 0.0015 24.9 2.2 42 243-287 36-77 (104)
71 3tuf_A Stage III sporulation p 23.3 41 0.0014 28.1 2.3 47 234-282 147-193 (197)
72 2xcz_A Possible ATLS1-like lig 23.2 60 0.002 23.9 3.1 30 257-286 17-46 (115)
73 3cm1_A SSGA-like sporulation-s 21.5 40 0.0014 26.5 1.8 51 15-68 30-80 (139)
74 3e11_A Predicted zincin-like m 20.8 77 0.0026 23.9 3.2 25 136-160 87-111 (114)
No 1
>3nvz_C Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3ns1_C* 3etr_C* 3nvv_C* 3nvw_C* 3nrz_C* 3nvy_C* 3eub_C* 3b9j_C* 1fiq_C* 3rca_C* 3sr6_C*
Probab=100.00 E-value=1.4e-68 Score=546.41 Aligned_cols=285 Identities=47% Similarity=0.769 Sum_probs=269.4
Q ss_pred cchhhhhhhccccCCceEEEcchHHHHhhcCCCCCeEEEEEEeeCCCCcEEEEEEEEEeecCCCCCchHHHHHHHHHhcC
Q psy14054 24 KPVNDDLSEDEEAVLNFVTYLDRDEDIVMTGQRNPFYGKYKVGFSKSGKLQVCEVWLYNNAGCSYDLSTAVMRRAIFHCT 103 (311)
Q Consensus 24 ~p~aa~~s~~~~~grPVkl~~tReE~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~ 103 (311)
.++++++|++ +||||||+|||+|+|+.+++||++.+++|+|+|+||+|+||+++++.|+|+|.+++..+......++.
T Consensus 239 ~~~aa~aA~~--~grPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~ 316 (755)
T 3nvz_C 239 SVAVALAAYK--TGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMD 316 (755)
T ss_dssp HHHHHHHHHH--HSSCEEEECCHHHHHHHSCCBCCEEEEEEEEECTTCCEEEEEEEEEEEEESSCTTHHHHHHHHHHTTT
T ss_pred HHHHHHHHHH--hCCCEEEEecHHHHHhhcCCCCceEEEEEEEECCCCcEEEEEEEEEEccCcCcCccHHHHHHHHHhcC
Confidence 4567888887 59999999999999999999999999999999999999999999999999999887777777777889
Q ss_pred CCCccCeEEEEEEEEEcCCCCcccccCCCchHHHHHHHHHHHHHHHHcCCCHHHHHHhhCCcCCCcccccceecCCCHHH
Q psy14054 104 NSFYVPHVRVNAFVCKTNLSSNTAFRAFGAPQSLLIAETMGHHVAQFLKLDYADFARSNLFVTGNLTHYNQVLEHCTLGR 183 (311)
Q Consensus 104 ~~Y~ipn~r~~~~~v~TN~~p~ga~RG~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~~~~ 183 (311)
++|+|||++++.+.|+||+||++||||||.+|++|++|++|||||++|||||+|||++|++++|+.+++|++++++.+.+
T Consensus 317 ~~Y~ipn~~~~~~~v~Tn~~~~~a~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~N~~~~~~~~~~g~~~~s~~~~~ 396 (755)
T 3nvz_C 317 NCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEGFSVPR 396 (755)
T ss_dssp TTBCCSSEEEEEEEEECSSCCCCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCBCTTCCBCTTCCHHH
T ss_pred CCccCCcEEEEEEEEeCCCCCCCcccCCChHHHHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCCCcCCCCccccCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHhhccCcceeeeEeeeEeeeccccccccCccceEEEEeeCCeEEEEeCCCCCCCChHHHH
Q psy14054 184 CFEQVHESGKYKERRKQCEEFNRHNRLRKRGVAIVPVLFGVAFETLFLNQAGALVLIYVDGSVLISHCGTEMGQGIHTKM 263 (311)
Q Consensus 184 ~l~~~~e~~~w~~~~~~~~~~~~~~~~~~rGig~a~~~~g~~~~~~~~~~~~a~v~l~~dG~v~v~~g~~d~GqG~~t~~ 263 (311)
||++++++++|++++++.+.++.+++|++||+|+++..++.++.....+++.+.|+|++||+|+|.+|++|||||++|++
T Consensus 397 ~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGig~~~~~~g~g~~~~~~~~~~a~v~l~~DG~v~v~~g~~e~GQG~~T~~ 476 (755)
T 3nvz_C 397 CWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKM 476 (755)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHCSSEEEEEEEEEEEEEESCSSGGGCEEEEEEEECTTSCEEEEESCCCSSSCHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHhhhccCCccceeEEEEEEEecccccCCCCCcceEEEEEecCCeEEEEECCCCCCCCHHHHH
Confidence 99999999999999888888887788999999999988888875434467899999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchhhhhhHHHHHhc
Q psy14054 264 IQVAARGLNIPAELIFINETATDKVPNASPTAASVGSDLNGMAILWA 310 (311)
Q Consensus 264 ~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~~~~~g~Av~~A 310 (311)
+||+||+||||+|+|+|..+||+.+|++++|+|||+|++.|.||++|
T Consensus 477 aQiaAe~Lgi~~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~A 523 (755)
T 3nvz_C 477 VQVASKALKIPISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEA 523 (755)
T ss_dssp HHHHHHHHTSCGGGEECCCEETTTSCSCCCSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHEEEECCCCCCCCCCCCCchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987
No 2
>2w3s_B Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 1jrp_B* 2w3r_B* 1jro_B* 2w54_B* 2w55_B*
Probab=100.00 E-value=3.3e-67 Score=538.13 Aligned_cols=286 Identities=41% Similarity=0.601 Sum_probs=267.9
Q ss_pred ccchhhhhhhccccCCceEEEcchHHHHhhcCCCCCeEEEEEEeeCCCCcEEEEEEEEEeecCCCCCchHHHHHHHHHhc
Q psy14054 23 EKPVNDDLSEDEEAVLNFVTYLDRDEDIVMTGQRNPFYGKYKVGFSKSGKLQVCEVWLYNNAGCSYDLSTAVMRRAIFHC 102 (311)
Q Consensus 23 ~~p~aa~~s~~~~~grPVkl~~tReE~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~ 102 (311)
.+++++++|++ +||||||+|||+|+|..+++||++.+++|+|+|+||+|++|+++++.|+|+|.+++..++.......
T Consensus 238 ~~~~aA~~A~~--~grPVkl~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~ 315 (777)
T 2w3s_B 238 LAIACAVAARA--TGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFVHLARCGWSADLSLPVCDRAMLHA 315 (777)
T ss_dssp HHHHHHHHHHH--HSSCEEEECCHHHHHHHSCCCCCEEEEEEEEECTTSCEEEEEEEEEEECCSSCTTHHHHHHHHHHTT
T ss_pred HHHHHHHHHHH--hCCCEEEEecHHHHhhhcCCCCceEEEEEEEECCCCCEEEEEEEEEEcCCcccccchhHHHHHHHhc
Confidence 45678888887 6999999999999999999999999999999999999999999999999999988877777666778
Q ss_pred CCCCccCeEEEEEEEEEcCCCCcccccCCCchHHHHHHHHHHHHHHHHcCCCHHHHHHhhCCcC----------------
Q psy14054 103 TNSFYVPHVRVNAFVCKTNLSSNTAFRAFGAPQSLLIAETMGHHVAQFLKLDYADFARSNLFVT---------------- 166 (311)
Q Consensus 103 ~~~Y~ipn~r~~~~~v~TN~~p~ga~RG~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~---------------- 166 (311)
.++|+|||++++++.|+||++|+|||||||.+|++|++|++|||||++|||||+|||++|+.++
T Consensus 316 ~~~Y~ipn~~~~~~~v~Tn~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~~~~~~~~~~~~~~ 395 (777)
T 2w3s_B 316 DGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAIEHLARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPI 395 (777)
T ss_dssp TTTBCCSSEEEEEEEECCSSCCCCCCTTTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHTTBCCCC---------------
T ss_pred CCccccCCEEEEEEEEeCCCCCCCccCCCChHHHHHHHHHHHHHHHHHhCcCHHHHHHHhccCccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred --C--CcccccceecCCCHHHHHHHHHHcCChHHHHHHHHHHhhccCcceeeeEeeeEeeeccccccccCccceEEEEee
Q psy14054 167 --G--NLTHYNQVLEHCTLGRCFEQVHESGKYKERRKQCEEFNRHNRLRKRGVAIVPVLFGVAFETLFLNQAGALVLIYV 242 (311)
Q Consensus 167 --g--~~~~~g~~~~~~~~~~~l~~~~e~~~w~~~~~~~~~~~~~~~~~~rGig~a~~~~g~~~~~~~~~~~~a~v~l~~ 242 (311)
| +.+++|++++++++.+||++++++++|++++++++.++..+++++||+|+++..++.++.....+++.+.|+|++
T Consensus 396 ~~~~p~~~~~g~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGiG~a~~~~g~~~~~~~~~~~~a~v~l~~ 475 (777)
T 2w3s_B 396 ATKKTQTTHYGQEVADCVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGALVQIYT 475 (777)
T ss_dssp --CCCCBCTTCCBCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHTCSSEEEEEEEEEEEEECSCSSGGGCEEEEEEEECT
T ss_pred CCCCCccCCCCccccCCCHHHHHHHHHHhcCHHHHHHHHHHhhcCCCCeeEEEEEEEeeEccccccccCCCCceEEEEcc
Confidence 8 888999999999999999999999999998888888877777778999999998988764323356889999999
Q ss_pred CCeEEEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchhhhhhHHHHHhc
Q psy14054 243 DGSVLISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDKVPNASPTAASVGSDLNGMAILWA 310 (311)
Q Consensus 243 dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~~~~~g~Av~~A 310 (311)
||+|+|++|++|||||++|+++||+||+||||+|+|+|..+||+.+|++++|+|||++++.|.||++|
T Consensus 476 DG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~A 543 (777)
T 2w3s_B 476 DGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGADMNGMAVKDA 543 (777)
T ss_dssp TSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEECCEETTTSCSCCCSCTTCHHHHHHHHHHHH
T ss_pred CCeEEEEECCccCCCChhHHHHHHHHHHHCCCHHHEEEEcCCCCCCCCCCCCccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999987
No 3
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=100.00 E-value=1.3e-65 Score=548.08 Aligned_cols=285 Identities=47% Similarity=0.769 Sum_probs=270.4
Q ss_pred cchhhhhhhccccCCceEEEcchHHHHhhcCCCCCeEEEEEEeeCCCCcEEEEEEEEEeecCCCCCchHHHHHHHHHhcC
Q psy14054 24 KPVNDDLSEDEEAVLNFVTYLDRDEDIVMTGQRNPFYGKYKVGFSKSGKLQVCEVWLYNNAGCSYDLSTAVMRRAIFHCT 103 (311)
Q Consensus 24 ~p~aa~~s~~~~~grPVkl~~tReE~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~ 103 (311)
+++++++|++ +||||||+|||+|+|..+++||++.+++|+|+|+||+|+||+++++.|+|+|.+++..++..+..+..
T Consensus 809 ~~~aAlaA~~--~gRPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~ 886 (1332)
T 3unc_A 809 SVAVALAAYK--TGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMD 886 (1332)
T ss_dssp HHHHHHHHHH--HSSCEEEECCHHHHHHHSCCBCCEEEEEEEEECTTSCEEEEEEEEEEEEESSCTTHHHHHHHHHHTTT
T ss_pred HHHHHHHHHH--hCCCEEEEecHHHHHhhcCCCCceeEEEEEEECCCCcEEEEEEEEEEcCCcCccccHHHHHHHHHhcC
Confidence 4567888887 69999999999999999999999999999999999999999999999999999888777777778899
Q ss_pred CCCccCeEEEEEEEEEcCCCCcccccCCCchHHHHHHHHHHHHHHHHcCCCHHHHHHhhCCcCCCcccccceecCCCHHH
Q psy14054 104 NSFYVPHVRVNAFVCKTNLSSNTAFRAFGAPQSLLIAETMGHHVAQFLKLDYADFARSNLFVTGNLTHYNQVLEHCTLGR 183 (311)
Q Consensus 104 ~~Y~ipn~r~~~~~v~TN~~p~ga~RG~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~~~~ 183 (311)
++|+|||++++++.|+||+|+++||||||.+|++|++|++|||||++|||||+|||++|++++|+.+++|++++++.+.+
T Consensus 887 ~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~g~~t~~g~~~~~~~l~~ 966 (1332)
T 3unc_A 887 NCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEGFSVPR 966 (1332)
T ss_dssp TTBCCSSEEEEEEEEECSSCCCCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCBCTTCCBCCSCCHHH
T ss_pred CCccCCcEEEEEEEEeCCCCCCCcccCCCcHHHHHHHHHHHHHHHHHHCcCHHHHHHHhcCCCCCcCCCCcccCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHhhccCcceeeeEeeeEeeeccccccccCccceEEEEeeCCeEEEEeCCCCCCCChHHHH
Q psy14054 184 CFEQVHESGKYKERRKQCEEFNRHNRLRKRGVAIVPVLFGVAFETLFLNQAGALVLIYVDGSVLISHCGTEMGQGIHTKM 263 (311)
Q Consensus 184 ~l~~~~e~~~w~~~~~~~~~~~~~~~~~~rGig~a~~~~g~~~~~~~~~~~~a~v~l~~dG~v~v~~g~~d~GqG~~t~~ 263 (311)
||++++++++|++|+++.+.++.+++|++||+|+++..+|.++.....+++.+.|+|++||+|+|.+|++|||||++|++
T Consensus 967 ~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGig~~~~~~g~g~~~~~~~~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~ 1046 (1332)
T 3unc_A 967 CWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKM 1046 (1332)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHCSSEEEEEEEEEEEEEESCSSGGGCEEEEEEEECTTSCEEEEESCCCSSSCHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHhhhcCCcceeeEEEEEEEeeeeccCCCCCcceEEEEEcCCCeEEEEECCcCCCCCHHHHH
Confidence 99999999999999988888888888999999999988988875444567899999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchhhhhhHHHHHhc
Q psy14054 264 IQVAARGLNIPAELIFINETATDKVPNASPTAASVGSDLNGMAILWA 310 (311)
Q Consensus 264 ~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~~~~~g~Av~~A 310 (311)
+||+||+||||+|+|+|..+||+.+|++++|+|||++++.|.||++|
T Consensus 1047 aQiaAe~LGip~e~V~v~~~DT~~~P~~~~t~aSr~t~~~G~Av~~A 1093 (1332)
T 3unc_A 1047 VQVASKALKIPISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEA 1093 (1332)
T ss_dssp HHHHHHHHTSCGGGEECCCEETTTSCSCCCSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHEEEEcCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987
No 4
>1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A*
Probab=100.00 E-value=2.9e-65 Score=523.60 Aligned_cols=278 Identities=19% Similarity=0.194 Sum_probs=256.2
Q ss_pred ccchhhhhhhccccCCceEEEcchHHHHhhcCCCCCeEEEEEEeeCCCCcEEEEEEEEEeecCCCCCchHHHHHHHHHhc
Q psy14054 23 EKPVNDDLSEDEEAVLNFVTYLDRDEDIVMTGQRNPFYGKYKVGFSKSGKLQVCEVWLYNNAGCSYDLSTAVMRRAIFHC 102 (311)
Q Consensus 23 ~~p~aa~~s~~~~~grPVkl~~tReE~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~ 102 (311)
.+++++++|++ +||||||+|||+|+|..+++||++.+++|+|+|+||+|+|++++++.|+|+|.+++..+.......+
T Consensus 254 ~~~~aA~~A~~--~grPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~v~~~~~~~~ 331 (769)
T 1rm6_A 254 FEIIAGLLARK--AKGTVRLLQTREETFIAHRGRPWTEVKMKIGLKKDGKIAALALEATQAGGAYAGYGIITILYTGALM 331 (769)
T ss_dssp HHHHHHHHHHH--HTSEEEEECCHHHHHHHCCCBCEEEEEEEEEECTTSCEEEEEEEEEEECCSSCTTHHHHHHHHHHTT
T ss_pred HHHHHHHHHHH--hCCCEEEEecHHHHhhhcCCCCCEEEEEEEEECCCCeEEEEEEEEEEeCCcCcccchHHHHHHHHhc
Confidence 36788999987 6999999999999999999999999999999999999999999999999999988877766666788
Q ss_pred CCCCccCeEEEEEEEEEcCCCCcccccCCCchHHHHHHHHHHHHHHHHcCCCHHHHHHhhCCcCCCc-ccccceecCCCH
Q psy14054 103 TNSFYVPHVRVNAFVCKTNLSSNTAFRAFGAPQSLLIAETMGHHVAQFLKLDYADFARSNLFVTGNL-THYNQVLEHCTL 181 (311)
Q Consensus 103 ~~~Y~ipn~r~~~~~v~TN~~p~ga~RG~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~g~~-~~~g~~~~~~~~ 181 (311)
.++|+|||++++++.|+||++|+|+|||||.+|++|++|++|||||++|||||+|||++|++++++. +++|+.++++++
T Consensus 332 ~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~N~~~~~~~~~~~g~~~~s~~~ 411 (769)
T 1rm6_A 332 HGLYHIPAIKHDAWRVYTNTPPCGAMRGHGTVDTRAAFEALLTEMGEELGIDSLKIRQINMLPQIPYVTMYAQRVMSYGV 411 (769)
T ss_dssp SSSBCCSCEEEEEEEECCSSSCCCCCSSTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHHTBCSSSSEECTTCCEECCCCH
T ss_pred CCCcCCCcEEEEEEEEECCCCCCccccCCChHHHHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCCCCcCCCCccccCCCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999988 999999999999
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHhhccCcceeeeEeeeEeeeccccc----cccCccceEEEEeeCCeEEEEeCCCCCCC
Q psy14054 182 GRCFEQVHESGKYKERRKQCEEFNRHNRLRKRGVAIVPVLFGVAFET----LFLNQAGALVLIYVDGSVLISHCGTEMGQ 257 (311)
Q Consensus 182 ~~~l~~~~e~~~w~~~~~~~~~~~~~~~~~~rGig~a~~~~g~~~~~----~~~~~~~a~v~l~~dG~v~v~~g~~d~Gq 257 (311)
++||++++++++|++++++. .++ ||+|++++.+++++.. ...+++.+.|+|++||+|+|++|++||||
T Consensus 412 ~~~l~~~~~~~~w~~r~~~~------~~g--rG~Gia~~~~~~g~~~~~~~~~~~~~~a~v~l~~dG~v~v~~g~~e~Gq 483 (769)
T 1rm6_A 412 PECLEKVKAASGWEERKGKL------PKG--RGLGIALSHFVSGTSTPKHWTGEPHATVNLKLDFDGGITLLTGAADIGQ 483 (769)
T ss_dssp HHHHHHHHHHHTHHHHTTCS------CTT--EEEEEEEEEEESSCSSCSSCCCCCSEEEEEEECTTCCEEEEECCCCSSS
T ss_pred HHHHHHHHHhCCchhhhhhh------ccC--ceEEEEEEEEecccCccccccCCCCccEEEEEeCCCeEEEEECCccCCC
Confidence 99999999999998754322 123 8888888888877532 12256889999999999999999999999
Q ss_pred ChHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchhhhhhHHHHHhc
Q psy14054 258 GIHTKMIQVAARGLNIPAELIFINETATDKVPNASPTAASVGSDLNGMAILWA 310 (311)
Q Consensus 258 G~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~~~~~g~Av~~A 310 (311)
|++|+++||+||+||||+|+|+|..+||+.+|++++|+|||++++.|.||++|
T Consensus 484 G~~T~~aQiaAe~Lgip~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~A 536 (769)
T 1rm6_A 484 GSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNASISA 536 (769)
T ss_dssp CHHHHHHHHHHHHHTCCGGGEEEEESBTTTSCCCCCSCTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCCccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987
No 5
>1t3q_B Quinoline 2-oxidoreductase large subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.41.1.1 d.133.1.1
Probab=100.00 E-value=4.3e-65 Score=523.45 Aligned_cols=280 Identities=20% Similarity=0.170 Sum_probs=251.7
Q ss_pred ccchhhhhhhccccCCceEEEcchHHHHhhcCCCCCeEEEEEEeeCCCCcEEEEEEEEEeecCCCCC--chHHHHH-HHH
Q psy14054 23 EKPVNDDLSEDEEAVLNFVTYLDRDEDIVMTGQRNPFYGKYKVGFSKSGKLQVCEVWLYNNAGCSYD--LSTAVMR-RAI 99 (311)
Q Consensus 23 ~~p~aa~~s~~~~~grPVkl~~tReE~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~--~~~~~~~-~~~ 99 (311)
++++++++|++ +||||||+|||+|+|..+++||++.+++|+|+|+||+|+|++++++.|+|+|.+ ++..+.. ...
T Consensus 264 ~~~~aA~~A~~--~grPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~~v~~~~~~ 341 (788)
T 1t3q_B 264 EELLVCLLSRA--LGRPVRWIEDRQENFLGATHAKQQRNEMGLAFDGDGRFLALENRSITDGGAYNNLPWTQLVESHVGN 341 (788)
T ss_dssp HHHHHHHHHHH--HTSCEEEECCHHHHHHHSCBBCCEEEEEEEEECTTCCEEEEEEEEEEECCSSCCTTTCGGGTHHHHH
T ss_pred HHHHHHHHHHH--hCCCEEEEecHHHHhhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEEcCCCCccccccchhHHHHHH
Confidence 47788999987 699999999999999999999999999999999999999999999999999987 7666555 556
Q ss_pred HhcCCCCccCeEEEEEEEEEcCCCCcccccCCCchHHHHHHHHHHHHHHHHcCCCHHHHHHhhCCcCCC---ccccccee
Q psy14054 100 FHCTNSFYVPHVRVNAFVCKTNLSSNTAFRAFGAPQSLLIAETMGHHVAQFLKLDYADFARSNLFVTGN---LTHYNQVL 176 (311)
Q Consensus 100 ~~~~~~Y~ipn~r~~~~~v~TN~~p~ga~RG~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~g~---~~~~g~~~ 176 (311)
..+.++|+|||++++++.|+||++|+|+|||||.+|++|++|++|||||++|||||+|||++|++++++ .+++|+.+
T Consensus 342 ~~~~~~Y~ipn~~~~~~~v~Tn~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~p~~~~~g~~~ 421 (788)
T 1t3q_B 342 AVILGVYKVPAVSEESIAVATNKCPIGAYRGVGFTAGQIARETLIDRAARQLGLSPFEIRRRNVVMPEDFPFTNRLGQTH 421 (788)
T ss_dssp HTTTTTBCCSEEEEEEEEECCSSSCBCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHTTBCCGGGCSEECTTSCEE
T ss_pred HhcCCCcCCCcEEEEEEEEECCCCCCCcccCCcHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhcCCCCCccccCCCCccc
Confidence 778999999999999999999999999999999999999999999999999999999999999999887 78889989
Q ss_pred cCCCHHHHHHHHHHcCChH---HHHHHHHHHhhccCcceeeeEeeeEeeeccccccccC--------ccceEEEEeeCCe
Q psy14054 177 EHCTLGRCFEQVHESGKYK---ERRKQCEEFNRHNRLRKRGVAIVPVLFGVAFETLFLN--------QAGALVLIYVDGS 245 (311)
Q Consensus 177 ~~~~~~~~l~~~~e~~~w~---~~~~~~~~~~~~~~~~~rGig~a~~~~g~~~~~~~~~--------~~~a~v~l~~dG~ 245 (311)
+++++++||++++++++|+ +++++.+ .++++ ||+|++++.+++++.....+ ++.+.|+|++||+
T Consensus 422 ~s~~~~~~l~~~~~~~~w~~~~~r~~~~~---~~g~~--~G~GiA~~~~~~g~~~~~~~~~~~~~~~~~~a~v~l~~dG~ 496 (788)
T 1t3q_B 422 REGTYLQTINLLEEMVNPEAFRQRQAEAR---ARGKY--LGLGVSVFNEVTGTGTRTLSFLGTPTTTHDSATVRIDPTGK 496 (788)
T ss_dssp CSCCHHHHHHHHHHHHCHHHHHHHHHHHH---TTTEE--EEEEEEEEEEEESCCHHHHHHTTCCCCCCBEEEEEECTTSC
T ss_pred CCCCHHHHHHHHHHhcCCchhhhhhhhhh---ccCCe--EEEEEEEEEeccccCcccccccccccCccccEEEEEecCCe
Confidence 9999999999999999998 4443332 33333 77777777777664210001 5789999999999
Q ss_pred EEEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchhhhhhHHHHHhc
Q psy14054 246 VLISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDKVPNASPTAASVGSDLNGMAILWA 310 (311)
Q Consensus 246 v~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~~~~~g~Av~~A 310 (311)
|+|.+|++|||||++|+++||+||+||||+|+|+|..+||+ +|++++|+|||++++.|.||++|
T Consensus 497 v~v~~g~~e~GqG~~T~~aQiaAe~LGip~~~V~v~~~DT~-~p~~~~t~aSr~t~~~G~Av~~A 560 (788)
T 1t3q_B 497 VTVTTSLASSGQGHETTLAQIAADVLGVPASDVVIQAGSTK-NTYGFGAYASRGAVIGAGSIGRA 560 (788)
T ss_dssp EEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEEECSBTT-SCCBCCSCTTCHHHHHHHHHHHH
T ss_pred EEEEECCcCCCCCHHHHHHHHHHHHHCCCHHHEEEecCCCC-CCCCCCCccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 99999999999999999999987
No 6
>1ffv_B CUTL, molybdoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.41.1.1 d.133.1.1 PDB: 1ffu_B*
Probab=100.00 E-value=2.1e-65 Score=526.31 Aligned_cols=287 Identities=19% Similarity=0.146 Sum_probs=257.5
Q ss_pred CccchhhhhhhccccCCceEEEcchHHHHhhcCCCCCeEEEEEEeeCCCCcEEEEEEEEEeecCCCCC-chHHHHH-HHH
Q psy14054 22 NEKPVNDDLSEDEEAVLNFVTYLDRDEDIVMTGQRNPFYGKYKVGFSKSGKLQVCEVWLYNNAGCSYD-LSTAVMR-RAI 99 (311)
Q Consensus 22 ~~~p~aa~~s~~~~~grPVkl~~tReE~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~-~~~~~~~-~~~ 99 (311)
.++++++++|++ +||||||+|||+|+|..+++||++.+++|+|+|+||+|+|++++++.|+|+|.. ++..+.. ...
T Consensus 276 ~~~~~aa~~A~~--~grPVkl~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~v~~~~~~ 353 (803)
T 1ffv_B 276 PGYVCAIVASIV--LGRPVKWVEDRVENISTTAFARDYHMDGELAATPDGKILGLRVNVVADHGAFDACADPTKFPAGLF 353 (803)
T ss_dssp HHHHHHHHHHHH--HTSCEEEECCHHHHHHHSCEECCEEEEEEEEECTTCCEEEEEEEEEEECCSSCCCCCCTTCTTTTG
T ss_pred HHHHHHHHHHHH--hCCCEEEEechHHHhhhcCCCCCeEEEEEEEECCCCCEEEEEEEEEecCCcccccccchhHHHHHH
Confidence 345778999987 699999999999999999999999999999999999999999999999999965 6554433 223
Q ss_pred HhcCCCCccCeEEEEEEEEEcCCCCcc-cccCCCc-hHHHHHHHHHHHHHHHHcCCCHHHHHHhhCCcCCC---cccccc
Q psy14054 100 FHCTNSFYVPHVRVNAFVCKTNLSSNT-AFRAFGA-PQSLLIAETMGHHVAQFLKLDYADFARSNLFVTGN---LTHYNQ 174 (311)
Q Consensus 100 ~~~~~~Y~ipn~r~~~~~v~TN~~p~g-a~RG~G~-~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~g~---~~~~g~ 174 (311)
..+.++|+|||++++++.|+||++|+| +|||||. +|++|++|++|||||++|||||+|||++|++++++ .+++|.
T Consensus 354 ~~~~~~Y~ipn~~~~~~~v~TN~~p~g~a~Rg~G~~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~p~~~~~g~ 433 (803)
T 1ffv_B 354 HICSGSYDIPRAHCSVKGVYTNKAPGGVAYXXSFRVTEAVYLIERMVDVLAQKLNMDKAEIRAKNFIRKEQFPYTTQFGF 433 (803)
T ss_dssp GGTTTTBCCSEEEEEEEEECCSSCCEESCSSCTTTHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHBCCGGGCSEECTTSC
T ss_pred hhcCCCccCCcEEEEEEEEEcCCCCCccceeccCCCchhHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCCcCccccCCCc
Confidence 346899999999999999999999999 9999999 99999999999999999999999999999998876 577899
Q ss_pred eecCCCHHHHHHHHHHcCChHHHHHHHHHHhhccC-cceeeeEeeeEeeeccccccc-------cCccceEEEEeeCCeE
Q psy14054 175 VLEHCTLGRCFEQVHESGKYKERRKQCEEFNRHNR-LRKRGVAIVPVLFGVAFETLF-------LNQAGALVLIYVDGSV 246 (311)
Q Consensus 175 ~~~~~~~~~~l~~~~e~~~w~~~~~~~~~~~~~~~-~~~rGig~a~~~~g~~~~~~~-------~~~~~a~v~l~~dG~v 246 (311)
.++++++++||++++++++|++++++...++..++ |++||+|++++.+++++...+ ..++.+.|+|++||+|
T Consensus 434 ~~~~~~~~~~l~~~~~~~~w~~~~~~~~~~~~~g~~~~~rGiG~a~~~~~~g~~~~~~~~~~~~~~~~~a~v~l~~dG~v 513 (803)
T 1ffv_B 434 EYDSGDYHTALKKVLDAVDYPALRAEQAARRADPNSPTLMGIGLVTFTEVVGAGPSKMCDILGVGMFDSCEIRIHPTGSA 513 (803)
T ss_dssp EECCCCHHHHHHHHHHHHTHHHHHHHHHHHHHCTTCSEEEEEEEEEEECCBCCCCTTTCEETTEESCEEEEEEECTTSCE
T ss_pred ccCCccHHHHHHHHHHHCCchhHHHHhHhhhccCCCcceEEEEEEEEEEeccccccccccccccCCcccEEEEEecCCeE
Confidence 99999999999999999999977666666666666 367999999988887753100 0157899999999999
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchhhhhhHHHHHhc
Q psy14054 247 LISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDKVPNASPTAASVGSDLNGMAILWA 310 (311)
Q Consensus 247 ~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~~~~~g~Av~~A 310 (311)
+|.+|++|||||++|+++||+||+||||+|+|+|..+||+.+|++++|+|||+|++.|.||++|
T Consensus 514 ~v~~g~~e~GqG~~T~~aQiaAe~LGi~~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~A 577 (803)
T 1ffv_B 514 IARMGTITQGQGHQTTYAQIIATELGIPSEVIQVEEGDTSTAPYGLGTYGSRSTPVAGAAIALA 577 (803)
T ss_dssp EEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCHHHHHHHHHHHH
T ss_pred EEEECCcCCCCCHHHHHHHHHHHHHCCCHHHEEEecCCCCCCCCCCCcccchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999987
No 7
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=100.00 E-value=4.2e-64 Score=521.87 Aligned_cols=279 Identities=21% Similarity=0.264 Sum_probs=258.8
Q ss_pred cchhhhhhhccccCCceEEEcchHHHHhhcCCCCCeEEEEEEeeCCCCcEEEEEEEEEeecCCCCCchHHHHHHHHHhcC
Q psy14054 24 KPVNDDLSEDEEAVLNFVTYLDRDEDIVMTGQRNPFYGKYKVGFSKSGKLQVCEVWLYNNAGCSYDLSTAVMRRAIFHCT 103 (311)
Q Consensus 24 ~p~aa~~s~~~~~grPVkl~~tReE~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~ 103 (311)
+++++++|++ +||||||+|||+|+|..+++||++.+++|+|+|+||+|+|++++++.|+|+|.+++..+.........
T Consensus 430 ~~~aA~~A~~--~grPVkl~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~ 507 (907)
T 1vlb_A 430 EALVAVAAMA--TGRPVHLRYNYQQQQQYTGKRSPWEMNVKFAAKKDGTLLAMESDWLVDHGPYSEFGDLLTLRGAQFIG 507 (907)
T ss_dssp HHHHHHHHHH--HSSCEEEECCHHHHHHSSCBCCCEEEEEEEEECTTCCEEEEEEEEEEECTTCCTTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHH--hCCCEEEEechHHHhhccCCCCceEEEEEEEECCCCCEEEEEEEEEEcCCcccccchHHHHHHHhccC
Confidence 6788999987 69999999999999999999999999999999999999999999999999999888777666667889
Q ss_pred CCCccCeEEEEEEEEEcCCCCcccccCCCchHHHHHHHHHHHHHHHHcCCCHHHHHHhhCCcCCCcccccceecCCCHHH
Q psy14054 104 NSFYVPHVRVNAFVCKTNLSSNTAFRAFGAPQSLLIAETMGHHVAQFLKLDYADFARSNLFVTGNLTHYNQVLEHCTLGR 183 (311)
Q Consensus 104 ~~Y~ipn~r~~~~~v~TN~~p~ga~RG~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~~~~ 183 (311)
++|+|||++++++.|+||++|+|||||||.+|++|++|++|||||++|||||+|||++|++++++.+++|+.++++++++
T Consensus 508 ~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~~~~g~~~~~~~~~~ 587 (907)
T 1vlb_A 508 AGYNIPNIRGLGRTVATNHVWGSAFRGYGAPQSMFASECLMDMLAEKLGMDPLELRYKNAYRPGDTNPTGQEPEVFSLPD 587 (907)
T ss_dssp TTBCCCEEEEEEEEECCSSCCBCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCCCTTSCCCSCCCHHH
T ss_pred CCcCCCcEEEEEEEEcCCCCCCcccCCCChHHHHHHHHHHHHHHHHHhCcCHHHHHHHhcCCCCCcCCCCccccCccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHhhccCcceeeeEeeeEeeeccccccccCccceEEEEeeCCeEEEEeCCCCCCCChHHHH
Q psy14054 184 CFEQVHESGKYKERRKQCEEFNRHNRLRKRGVAIVPVLFGVAFETLFLNQAGALVLIYVDGSVLISHCGTEMGQGIHTKM 263 (311)
Q Consensus 184 ~l~~~~e~~~w~~~~~~~~~~~~~~~~~~rGig~a~~~~g~~~~~~~~~~~~a~v~l~~dG~v~v~~g~~d~GqG~~t~~ 263 (311)
||++++++ |++++++.+.+ .+++| +||+|++++.+++++. ..+.+.+.|+|++||+|+|.+|++|||||++|++
T Consensus 588 ~l~~~~~~--w~~r~~~~~~~-~~g~~-~rGiGiA~~~~~~g~~--~~~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~ 661 (907)
T 1vlb_A 588 MIDQLRPK--YQAALEKAQKE-STATH-KKGVGISIGVYGSGLD--GPDASEAWAELNADGTITVHTAWEDHGQGADIGC 661 (907)
T ss_dssp HHHHHHHH--HHHHHHHHHHH-CCSSE-EEEEEEEEEEEESSST--TTCEEEEEEEECTTSCEEEECCCCCSSSCHHHHH
T ss_pred HHHHHHHH--HHHhhhhhhhc-cCCCc-eeEEEEEEEEeccccC--CCCCccEEEEEeCCCeEEEEECCccCCCCHHHHH
Confidence 99999999 98776655544 34445 5899999888888763 1256889999999999999999999999999999
Q ss_pred HHHHHHHh---CCCCCcEEEecCCCCCCCCCCCcccchhhhhhHHHHHhc
Q psy14054 264 IQVAARGL---NIPAELIFINETATDKVPNASPTAASVGSDLNGMAILWA 310 (311)
Q Consensus 264 ~Qi~Ae~L---gi~~~~V~v~~~dT~~~p~~~~t~~Sr~~~~~g~Av~~A 310 (311)
+||+||+| |||+|+|+|..+||+.+|++++|+|||++++.|.||++|
T Consensus 662 aQiaAe~L~~~Gip~~~V~v~~~DT~~~p~~~~t~gSr~t~~~G~Av~~A 711 (907)
T 1vlb_A 662 VGTAHEALRPMGVAPEKIKFTWPNTATTPNSGPSGGSRQQVMTGNAIRVA 711 (907)
T ss_dssp HHHHHHHHGGGTCCGGGEEECCCBTTTSCCCCCSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCHHHEEEecCCCCCCCCCCCCccchHHHHHHHHHHHH
Confidence 99999999 999999999999999999999999999999999999987
No 8
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=100.00 E-value=4.2e-64 Score=521.87 Aligned_cols=279 Identities=23% Similarity=0.309 Sum_probs=258.1
Q ss_pred cchhhhhhhccccCCceEEEcchHHHHhhcCCCCCeEEEEEEeeCCCCcEEEEEEEEEeecCCCCCchHHHHHHHHHhcC
Q psy14054 24 KPVNDDLSEDEEAVLNFVTYLDRDEDIVMTGQRNPFYGKYKVGFSKSGKLQVCEVWLYNNAGCSYDLSTAVMRRAIFHCT 103 (311)
Q Consensus 24 ~p~aa~~s~~~~~grPVkl~~tReE~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~ 103 (311)
+++++++|++ +||||||+|||+|+|..+++||++.+++|+|+|+||+|+|++++++.|+|+|.+++..+.........
T Consensus 432 ~~~aA~~A~~--~grPVkl~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~ 509 (907)
T 1dgj_A 432 EALVGVAVMA--TGRPCHLRYNYEQQQNYTGKRSPFWTTMRYAADRQGKILAMETDWSVDHGPYSEFGDLLTLRGAQYIG 509 (907)
T ss_dssp HHHHHHHHHH--HCSCEEEECCHHHHHHSSCBCCCEEEEEEEEECTTSCEEEEEEEEEEECCSCCTTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHH--hCCCEEEEeehHHHhhhcCCCCceEEEEEEEECCCCCEEEEEEEEEEcCCcccccchHHHHHHHHhcC
Confidence 6788999987 69999999999999999999999999999999999999999999999999999888777666667889
Q ss_pred CCCccCeEEEEEEEEEcCCCCcccccCCCchHHHHHHHHHHHHHHHHcCCCHHHHHHhhCCcCCCcccccceecCCCHHH
Q psy14054 104 NSFYVPHVRVNAFVCKTNLSSNTAFRAFGAPQSLLIAETMGHHVAQFLKLDYADFARSNLFVTGNLTHYNQVLEHCTLGR 183 (311)
Q Consensus 104 ~~Y~ipn~r~~~~~v~TN~~p~ga~RG~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~~~~ 183 (311)
++|+|||++++++.|+||++|+|||||||.+|++|++|++|||||++|||||+|||++|++++++.+++|+.++++++++
T Consensus 510 ~~Y~ipn~~~~~~~v~Tn~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~~~~g~~~~s~~~~~ 589 (907)
T 1dgj_A 510 AGYGIANIRGTGRTVATNHCWGAAFRGYGAPESEFPSEVLMDELAEKLGMDPFELRALNCYREGDTTSSGQIPEVMSLPE 589 (907)
T ss_dssp TTBCCSEEEEEEEEECCSSCCBCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCCCTTSCCCSCCCHHH
T ss_pred CCcCCCcEEEEEEEEcCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhcCCCCCcCCCCccccCccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHhhccCcceeeeEeeeEeeeccccccccCccceEEEEeeCCeEEEEeCCCCCCCChHHHH
Q psy14054 184 CFEQVHESGKYKERRKQCEEFNRHNRLRKRGVAIVPVLFGVAFETLFLNQAGALVLIYVDGSVLISHCGTEMGQGIHTKM 263 (311)
Q Consensus 184 ~l~~~~e~~~w~~~~~~~~~~~~~~~~~~rGig~a~~~~g~~~~~~~~~~~~a~v~l~~dG~v~v~~g~~d~GqG~~t~~ 263 (311)
||++++++ |++++++.+.+ .+++| +||+|++++.+++++. ..+++.+.|+|++||+|+|.+|++|||||++|++
T Consensus 590 ~l~~~~~~--w~~r~~~~~~~-~~g~~-~rG~Gia~~~~~~g~~--~~~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~ 663 (907)
T 1dgj_A 590 MFDKMRPY--YEESKKRVKER-STAEI-KRGVGVALGVYGAGLD--GPDTSEAWVELNDDGSVTLGNSWEDHGQGADAGS 663 (907)
T ss_dssp HHHHHHHH--HHHHHHHHHTT-CCSSE-EEEEEEEEEEEEESSS--SSCEEEEEEEECTTSCEEEEECCCCSSSCHHHHH
T ss_pred HHHHHHHH--HHhhhhhhhcc-cCCCe-eEEEEEEEEEecccCC--CCCCccEEEEEeCCCeEEEEECCcCCCccHHHHH
Confidence 99999999 98776655433 34445 5888898888887753 1246889999999999999999999999999999
Q ss_pred HHHHHHHh---CCCCCcEEEecCCCCCCCCCCCcccchhhhhhHHHHHhc
Q psy14054 264 IQVAARGL---NIPAELIFINETATDKVPNASPTAASVGSDLNGMAILWA 310 (311)
Q Consensus 264 ~Qi~Ae~L---gi~~~~V~v~~~dT~~~p~~~~t~~Sr~~~~~g~Av~~A 310 (311)
+||+||+| |||+|+|+|..+||+.+|++++|+|||++++.|.||++|
T Consensus 664 aQiaAe~L~~~Gip~~~V~v~~~DT~~~p~~~~t~gSr~t~~~G~Av~~A 713 (907)
T 1dgj_A 664 LGTAHEALRPLGITPENIHLVMNDTSKTPNSGPAGGSRSQVVTGNAIRVA 713 (907)
T ss_dssp HHHHHHHTGGGTCCGGGEEEEESBTTTSCCCCCSCTTCTTTHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCHHHEEEecCCCCCCCCCCCCccchHHHHHHHHHHHH
Confidence 99999999 999999999999999999999999999999999999987
No 9
>1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B*
Probab=100.00 E-value=9.1e-65 Score=522.32 Aligned_cols=287 Identities=21% Similarity=0.171 Sum_probs=252.8
Q ss_pred CccchhhhhhhccccCCceEEEcchHHHHhhcCCCCCeEEEEEEeeCCCCcEEEEEEEEEeecCCCCC-chHHHHHHH-H
Q psy14054 22 NEKPVNDDLSEDEEAVLNFVTYLDRDEDIVMTGQRNPFYGKYKVGFSKSGKLQVCEVWLYNNAGCSYD-LSTAVMRRA-I 99 (311)
Q Consensus 22 ~~~p~aa~~s~~~~~grPVkl~~tReE~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~-~~~~~~~~~-~ 99 (311)
.++++++++|++ +||||||+|||+|+|..+++||++.+++|+|+|+||+|+|++++++.|+|+|.. ++..+.... .
T Consensus 279 ~~~~~aA~~A~~--~grPVkl~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~v~~~~~~ 356 (809)
T 1n62_B 279 SGYVCAVVASIV--LGVPVKWVEDRMENLSTTSFARDYHMTTELAATKDGKILAMRCHVLADHGAFDACADPSKWPAGFM 356 (809)
T ss_dssp HHHHHHHHHHHH--HSSCEEEECCHHHHHHHSCEECCEEEEEEEEECTTCCEEEEEEEEEEECCSSCCCCCCTTCTTTTG
T ss_pred hHHHHHHHHHHH--hCCCEEEEechHHHhhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEEeCCcCcccccchhhhhhhh
Confidence 345778999987 699999999999999999999999999999999999999999999999999965 655443322 3
Q ss_pred HhcCCCCccCeEEEEEEEEEcCCCCcc-cccCCCc-hHHHHHHHHHHHHHHHHcCCCHHHHHHhhCCcCCC---cccccc
Q psy14054 100 FHCTNSFYVPHVRVNAFVCKTNLSSNT-AFRAFGA-PQSLLIAETMGHHVAQFLKLDYADFARSNLFVTGN---LTHYNQ 174 (311)
Q Consensus 100 ~~~~~~Y~ipn~r~~~~~v~TN~~p~g-a~RG~G~-~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~g~---~~~~g~ 174 (311)
..+.++|+|||++++++.|+||++|+| +|||||. +|++|++|++|||||++|||||+|||++|++++++ .+++|.
T Consensus 357 ~~~~~~Y~ipn~~~~~~~v~TN~~~~g~a~Rg~G~~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~p~~~~~g~ 436 (809)
T 1n62_B 357 NICTGSYDMPVAHLAVDGVYTNKASGGVAYRCSFRVTEAVYAIERAIETLAQRLEMDSADLRIKNFIQPEQFPYMAPLGW 436 (809)
T ss_dssp GGTTTTBCCSCEEEEEEEECCSSCCEESCSSCTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCGGGCSEECTTSC
T ss_pred hhcCCCcCCCcEEEEEEEEECCCCCCCCEecCCCccHHHHHHHHHHHHHHHHHHCcCHHHHHHHhccCCCCCccccCCCc
Confidence 346899999999999999999999999 9999999 99999999999999999999999999999998876 577899
Q ss_pred eecCCCHHHHHHHHHHcCChHHHHHHHH----HHhhccCcceeeeEeeeEeeeccccccc----c---CccceEEEEeeC
Q psy14054 175 VLEHCTLGRCFEQVHESGKYKERRKQCE----EFNRHNRLRKRGVAIVPVLFGVAFETLF----L---NQAGALVLIYVD 243 (311)
Q Consensus 175 ~~~~~~~~~~l~~~~e~~~w~~~~~~~~----~~~~~~~~~~rGig~a~~~~g~~~~~~~----~---~~~~a~v~l~~d 243 (311)
.++++++++||++++++++|++++++.. .||...+|++||+|++++.+++++...+ . .++.+.|+|++|
T Consensus 437 ~~~~~~~~~~l~~~~~~~~w~~~~~~~~~~~~~fn~g~~~~~rGiGia~~~~~~g~~~~~~~~~~~~~~~~~a~v~l~~D 516 (809)
T 1n62_B 437 EYDSGNYPLAMKKAMDTVGYHQLRAEQKAKQEAFKRGETREIMGIGISFFTEIVGAGPSKNCDILGVSMFDSAEIRIHPT 516 (809)
T ss_dssp EECCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCSEEEEEEEEEEECCBSCCCTTTCEETTEECCEEEEEEECTT
T ss_pred ccCCCCHHHHHHHHHHHcCchhhHHhHHhhhhhhccCCCceeEEEEEEEEEEeecccccccccccccCCcccEEEEEecC
Confidence 9999999999999999999986443332 2333222567899999988877653100 0 157899999999
Q ss_pred CeEEEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchhhhhhHHHHHhc
Q psy14054 244 GSVLISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDKVPNASPTAASVGSDLNGMAILWA 310 (311)
Q Consensus 244 G~v~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~~~~~g~Av~~A 310 (311)
|+|+|.+|++|||||++|+++||+||+||||+|+|+|..+||+.+|++++|+|||++++.|.||++|
T Consensus 517 G~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~A 583 (809)
T 1n62_B 517 GSVIARMGTKSQGQGHETTYAQIIATELGIPADDIMIEEGNTDTAPYGLGTYGSRSTPTAGAATAVA 583 (809)
T ss_dssp SCEEEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCTTTTHHHHHHHH
T ss_pred CeEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCcccchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999987
No 10
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=100.00 E-value=3.2e-63 Score=531.88 Aligned_cols=285 Identities=42% Similarity=0.666 Sum_probs=268.9
Q ss_pred cchhhhhhhccccCCceEEEcchHHHHhhcCCCCCeEEEEEEeeCCCCcEEEEEEEEEeecCCCCCchHHHHHHHHHhcC
Q psy14054 24 KPVNDDLSEDEEAVLNFVTYLDRDEDIVMTGQRNPFYGKYKVGFSKSGKLQVCEVWLYNNAGCSYDLSTAVMRRAIFHCT 103 (311)
Q Consensus 24 ~p~aa~~s~~~~~grPVkl~~tReE~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~ 103 (311)
+++++++|++ +||||||+|||+|+|..+++||++.+++|+|+|+||+|+|++++++.|+|+|.+++..+...+.....
T Consensus 814 ~~~aAlaA~~--~gRPVK~~~tR~E~~~~~~~R~~~~~~~~~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~ 891 (1335)
T 3zyv_A 814 ASVAAVAAQK--TGRPIRFILERRDDMLITGGRHPLLGKYKIGFMNNGKIKAADIQLYINGGCTPDDSELVIEYALLKLE 891 (1335)
T ss_dssp HHHHHHHHHH--HCSCEEEECCHHHHHHHSCCBCCEEEEEEEEECTTSCEEEEEEEEEEECCSSCTTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHH--hCCCEEEEECHHHHHhhcCCCCchheEEEEEecCCCCeeeeeeeeeeccccccccccchhhhhhhhcc
Confidence 4557777877 69999999999999999999999999999999999999999999999999999998888888888899
Q ss_pred CCCccCeEEEEEEEEEcCCCCcccccCCCchHHHHHHHHHHHHHHHHcCCCHHHHHHhhCCcCCCcccccceecCCCHHH
Q psy14054 104 NSFYVPHVRVNAFVCKTNLSSNTAFRAFGAPQSLLIAETMGHHVAQFLKLDYADFARSNLFVTGNLTHYNQVLEHCTLGR 183 (311)
Q Consensus 104 ~~Y~ipn~r~~~~~v~TN~~p~ga~RG~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~~~~ 183 (311)
++|+|||++++++.|+||++|.+||||||.+|++|++|++||++|++|||||+|||++|++++++.+++|++++++.+.+
T Consensus 892 g~Y~ipn~~~~~~~v~TN~~~~~a~RG~G~pq~~fa~E~~mD~lA~~lg~DP~elR~~N~~~~~~~~~~g~~~~~~~~~~ 971 (1335)
T 3zyv_A 892 NAYKIPNLRVRGRVCKTNLPSNTAFRGFGFPQGAFVTETCMSAVAAKCRLPPEKVRELNMYRTIDRTIHNQEFDPTNLLQ 971 (1335)
T ss_dssp TTBCCSEEEEEEEEECCSSCCCCCCTTTTHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHBCCSSCBCTTSCBC--CCHHH
T ss_pred CcceeeEEEEEEEEEeccCCCCCcccCCCchhheeEecchhhHHHHHhCCCHHHHHHHhccCCCccccCCcccccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHhhccCcceeeeEeeeEeeeccccccccCccceEEEEeeCCeEEEEeCCCCCCCChHHHH
Q psy14054 184 CFEQVHESGKYKERRKQCEEFNRHNRLRKRGVAIVPVLFGVAFETLFLNQAGALVLIYVDGSVLISHCGTEMGQGIHTKM 263 (311)
Q Consensus 184 ~l~~~~e~~~w~~~~~~~~~~~~~~~~~~rGig~a~~~~g~~~~~~~~~~~~a~v~l~~dG~v~v~~g~~d~GqG~~t~~ 263 (311)
||+++++.++|.+++++.++++..++|++||+|+++..++.++.......+.+.|+|++||+|+|.+|++|+|||++|++
T Consensus 972 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~rGi~~~~~~~~~g~~~~~~~~~~a~v~i~~DGsv~v~~G~~e~GQG~~T~~ 1051 (1335)
T 3zyv_A 972 CWEACVENSSYYNRKKAVDEFNQQRFWKKRGIAIIPMKFSVGFPKTFYYQAAALVQIYTDGSVLVAHGGVELGQGINTKM 1051 (1335)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHCSSSEEEEEEEEEEEECCCSSGGGGCEEEEEEECTTSCEEECBSCCCSSSCHHHHH
T ss_pred HHHHHHHhhhHHHHHHhhhhhhccCcceeeeeEEEEEEeeccCCcccccceeEEEEEeCCCcEEEEECCcCCCCchhHHH
Confidence 99999999999999999888998899999999999988888876555567899999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchhhhhhHHHHHhc
Q psy14054 264 IQVAARGLNIPAELIFINETATDKVPNASPTAASVGSDLNGMAILWA 310 (311)
Q Consensus 264 ~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~~~~~g~Av~~A 310 (311)
+||+||+||||+|+|+|..+||+.+|++++|+|||++.+.|.||++|
T Consensus 1052 aQiaAe~LGip~e~I~v~~~DT~~~P~~~gt~gSr~t~~~G~Av~~A 1098 (1335)
T 3zyv_A 1052 IQVASRELKIPMSYIHLDEMSTVTVPNTVTTGASTGADVNGRAVQNA 1098 (1335)
T ss_dssp HHHHHHHHTSCGGGEEECCEETTTSCSCCCSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHEEEecCCcCCCCCCCCCcccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999986
No 11
>3hrd_A Nicotinate dehydrogenase large molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=100.00 E-value=1e-42 Score=335.06 Aligned_cols=167 Identities=28% Similarity=0.371 Sum_probs=158.6
Q ss_pred cchhhhhhhccccCCceEEEcchHHHHhhcCCCCCeEEEEEEeeCCCCcEEEEEEEEEeecCCCCCchHHHHHHHHHhcC
Q psy14054 24 KPVNDDLSEDEEAVLNFVTYLDRDEDIVMTGQRNPFYGKYKVGFSKSGKLQVCEVWLYNNAGCSYDLSTAVMRRAIFHCT 103 (311)
Q Consensus 24 ~p~aa~~s~~~~~grPVkl~~tReE~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~ 103 (311)
+++++++|++ +||||||+|||+|+|+.+++||++.+++|+|+|+||+|+||+++++.|+|+|.+++..+.........
T Consensus 248 ~~~aa~~A~~--~grPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~~~Ga~~~~~~~~~~~~~~~~~ 325 (425)
T 3hrd_A 248 QCHCALLTYH--TKKPVKMVRSREESTTVSSKRHPMTMHCKTGATKDGRLQAVQVEMFGDTGAYASYGPAVITRATVHCM 325 (425)
T ss_dssp HHHHHHHHHH--HCSCEEEECCHHHHHHHSCBCCCEEEEEEEEECTTCCEEEEEEEEEEEEESSCTTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHH--hCCCEEEEeehHHHhhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEEccccccccchHHHHHHHhhcC
Confidence 3578899987 59999999999999999999999999999999999999999999999999999888877776666788
Q ss_pred CCCccCeEEEEEEEEEcCCCCcccccCCCchHHHHHHHHHHHHHHHHcCCCHHHHHHhhCCcCCCccccccee-cCCCHH
Q psy14054 104 NSFYVPHVRVNAFVCKTNLSSNTAFRAFGAPQSLLIAETMGHHVAQFLKLDYADFARSNLFVTGNLTHYNQVL-EHCTLG 182 (311)
Q Consensus 104 ~~Y~ipn~r~~~~~v~TN~~p~ga~RG~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~-~~~~~~ 182 (311)
++|+|||++++.+.++||+||+|||||+|.+|++|++|++|||||++|||||+|||++|++++|+.+++|+++ +++++.
T Consensus 326 ~~Y~ipn~~~~~~~v~tn~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~N~~~~~~~~~~g~~~~~s~~~~ 405 (425)
T 3hrd_A 326 GPYVVPNVRVDAKFVYTNNPMSGAFRGFGVPQASVCHEGQMNALAKALGMDPIDIRILNAHQVGAKLATGQVLENSVGLI 405 (425)
T ss_dssp CSBCCSCEEEEEEEEECSSSCBCCCTTTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHBCCTTCBCTTSCBCCSCCCHH
T ss_pred CCccCCcEEEEEEEEECCCCCCCcccCCCchHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCcCCCCCEECCCCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 899999
Q ss_pred HHHHHHHHcC
Q psy14054 183 RCFEQVHESG 192 (311)
Q Consensus 183 ~~l~~~~e~~ 192 (311)
+||+++++++
T Consensus 406 ~~l~~~~~~~ 415 (425)
T 3hrd_A 406 ETLEKAREKA 415 (425)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 12
>3hrd_B Nicotinate dehydrogenase medium molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=99.86 E-value=8.7e-22 Score=183.32 Aligned_cols=99 Identities=32% Similarity=0.402 Sum_probs=91.2
Q ss_pred ceeeeEeeeEeeeccccccccCccceEEEEeeCCeEEEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCCCC
Q psy14054 211 RKRGVAIVPVLFGVAFETLFLNQAGALVLIYVDGSVLISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDKVPN 290 (311)
Q Consensus 211 ~~rGig~a~~~~g~~~~~~~~~~~~a~v~l~~dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~ 290 (311)
|+||+|++++.++++. ....+.+.+.|+|++||+|+|.++.+|||||++|+++||+||+||||+|+|+|..+||+.+|+
T Consensus 2 k~rGiGia~~~~~~g~-~~~~~~~~a~v~i~~DG~V~v~~g~~emGQG~~T~laQIaAe~Lgi~~e~V~v~~~DT~~~p~ 80 (330)
T 3hrd_B 2 KKRGKGVGSMWYGIGN-TGLPNPAAAFVEIHGDGSANVMFGAADIGQGSGTAMAQIAAEELGLDYEKIHVTWGDTMVTPD 80 (330)
T ss_dssp EEEEEEEEEEEEECSS-TTSCCCEEEEEEECTTSCEEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTTSCC
T ss_pred cEEEEEEEEEEEecCC-CCCCCcceEEEEEeCCCeEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEEecCCCCCCC
Confidence 4688999988888873 223467899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccchhhhhhHHHHHhc
Q psy14054 291 ASPTAASVGSDLNGMAILWA 310 (311)
Q Consensus 291 ~~~t~~Sr~~~~~g~Av~~A 310 (311)
+++|+|||++++.|.|+++|
T Consensus 81 ~~~T~gSrst~~~g~Av~~A 100 (330)
T 3hrd_B 81 GGATSASRQTLITGNAVILA 100 (330)
T ss_dssp CCCSCTTCHHHHHHHHHHHH
T ss_pred CCCCcchHhHHhHHHHHHHH
Confidence 99999999999999999986
No 13
>3hrd_A Nicotinate dehydrogenase large molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=91.00 E-value=0.33 Score=46.07 Aligned_cols=57 Identities=11% Similarity=-0.007 Sum_probs=41.8
Q ss_pred CccceEEEEeeCCeEEEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchh
Q psy14054 232 NQAGALVLIYVDGSVLISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDKVPNASPTAASVG 299 (311)
Q Consensus 232 ~~~~a~v~l~~dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~ 299 (311)
+...+....++||+++|++++ |+. ....+.+|+.||+|+++|+|... +-+|.+|++.
T Consensus 187 Ep~~~~A~~~~~g~l~v~~st----Q~p-~~~r~~vA~~Lglp~~~VrV~~~------~vGGgFG~K~ 243 (425)
T 3hrd_A 187 EPDAGVSYYDNEGMLTVVVST----QNP-HYDRGEVAGMLALPNSKVRIIQA------TTGGGFGGKL 243 (425)
T ss_dssp SCCEEEEEECTTCCEEEEECC----SCH-HHHHHHHHHHTTCCGGGEEEEEC------BCCCCTTTTS
T ss_pred CCceEEEEECCCCeEEEEECC----CCH-HHHHHHHHHHhCCChhhEEEEeC------CCCCCCCCCc
Confidence 556777777778999999754 333 35677788999999999999853 4455666653
No 14
>3hrd_B Nicotinate dehydrogenase medium molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=89.41 E-value=0.76 Score=42.03 Aligned_cols=34 Identities=21% Similarity=0.117 Sum_probs=26.8
Q ss_pred ccceEEEEe-eCCeEEEE--eCCCCCCCChH--HHHHHH
Q psy14054 233 QAGALVLIY-VDGSVLIS--HCGTEMGQGIH--TKMIQV 266 (311)
Q Consensus 233 ~~~a~v~l~-~dG~v~v~--~g~~d~GqG~~--t~~~Qi 266 (311)
...++|+++ ..|.++|. +.+.|+|.-++ .+..||
T Consensus 186 a~~~eVeVd~~tG~v~v~~~~~~~D~G~~iNp~~~~gQi 224 (330)
T 3hrd_B 186 TTIAEVEVDTETGEVDVLKVVSAHDVGTPINRSMVEGQI 224 (330)
T ss_dssp EEEEEEEEETTTCCEEEEEEEEEEEEESCSBHHHHHHHH
T ss_pred EEEEEEEEECCCCcEEEEEEEEEEECCccCCHHHHHHHH
Confidence 467889998 47999997 78899998887 444666
No 15
>3nvz_C Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3ns1_C* 3etr_C* 3nvv_C* 3nvw_C* 3nrz_C* 3nvy_C* 3eub_C* 3b9j_C* 1fiq_C* 3rca_C* 3sr6_C*
Probab=86.61 E-value=1.3 Score=45.12 Aligned_cols=58 Identities=12% Similarity=0.135 Sum_probs=43.1
Q ss_pred CccceEEEEe-eCCeEEEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchhh
Q psy14054 232 NQAGALVLIY-VDGSVLISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDKVPNASPTAASVGS 300 (311)
Q Consensus 232 ~~~~a~v~l~-~dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~~ 300 (311)
+...+....+ +||+++|++++ |+. ....+.+|+.||+|+++|+|.. |+-+|.+|++..
T Consensus 175 Ep~~~~A~~~~~~g~l~v~~st----Q~p-~~~r~~lA~~Lglp~~~VrV~~------~~vGGgFG~K~~ 233 (755)
T 3nvz_C 175 ETHCTIAIPKGEEGEMELFVST----QNA-MKTQSFVAKMLGVPVNRILVRV------KRMGGGFGGKET 233 (755)
T ss_dssp SCCEEEEEECSSTTCEEEEECC----SCH-HHHHHHHHHHHTCCGGGEEEEE------CCCSCCTTTTSS
T ss_pred CCceEEEEEeCCCCeEEEEECC----CCH-HHHHHHHHHHHCCCCccEEEEE------CCCCCCCCCccc
Confidence 5567777777 68999999744 433 3556778899999999999985 455667777653
No 16
>1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A*
Probab=86.11 E-value=1.6 Score=44.52 Aligned_cols=58 Identities=10% Similarity=-0.051 Sum_probs=42.8
Q ss_pred CccceEEEEee-CCeEEEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchhh
Q psy14054 232 NQAGALVLIYV-DGSVLISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDKVPNASPTAASVGS 300 (311)
Q Consensus 232 ~~~~a~v~l~~-dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~~ 300 (311)
+...+....++ ||+++|++++ |+. ....+.+|+.||||+++|+|.. |+-+|.+|++..
T Consensus 192 Ep~~~~A~~~~~~g~l~v~~st----Q~p-~~~r~~~A~~Lglp~~~VrV~~------~~vGGgFG~K~~ 250 (769)
T 1rm6_A 192 ELNATLAEYDPVRDMLTLNTTT----QVP-YYVHLKVAACLQMDSARIRVIK------PFLGGGFGARTE 250 (769)
T ss_dssp SCCEEEEEEETTTTEEEEEECC----SCH-HHHHHHHHHHHTCCGGGEEEEC------CBCCCCTTTTSS
T ss_pred CCceEEEEEeCCCCeEEEEECC----cCH-HHHHHHHHHHhCCCHHHEEEEe------CCCCCCCCCccc
Confidence 55677777776 7999999754 333 3557888999999999999984 445666676643
No 17
>1t3q_B Quinoline 2-oxidoreductase large subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.41.1.1 d.133.1.1
Probab=85.93 E-value=1.5 Score=44.95 Aligned_cols=58 Identities=16% Similarity=0.103 Sum_probs=43.2
Q ss_pred CccceEEEEee-CCeEEEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchhh
Q psy14054 232 NQAGALVLIYV-DGSVLISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDKVPNASPTAASVGS 300 (311)
Q Consensus 232 ~~~~a~v~l~~-dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~~ 300 (311)
+...+....++ ||+++|++++ |+. ....+.+|+.||||+++|+|.. |+-+|.+|++..
T Consensus 202 Ep~~~~A~~~~~~g~l~v~~st----Q~p-~~~r~~lA~~Lglp~~~VrV~~------~~vGGgFG~K~~ 260 (788)
T 1t3q_B 202 ETRGAVAQYEWTTQQLILWTAT----QMP-SFVRTMVAMFCAIPEHLIEVRV------PDVGGGFGQKAH 260 (788)
T ss_dssp SCCEEEEEEETTTTEEEEEECC----SCH-HHHHHHHHHHHTCCGGGEEEEC------CBCSCCTTTTSS
T ss_pred CCceEEEEEECCCCEEEEEECC----CCH-HHHHHHHHHHHCCChHHEEEEe------CCCCCCCCCCCc
Confidence 55677777776 7999999755 333 4568888999999999999984 445666676643
No 18
>2w3s_B Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 1jrp_B* 2w3r_B* 1jro_B* 2w54_B* 2w55_B*
Probab=85.54 E-value=1.5 Score=44.81 Aligned_cols=56 Identities=16% Similarity=0.121 Sum_probs=42.3
Q ss_pred CccceEEEEeeCCeEEEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchh
Q psy14054 232 NQAGALVLIYVDGSVLISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDKVPNASPTAASVG 299 (311)
Q Consensus 232 ~~~~a~v~l~~dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~ 299 (311)
+...+....+.|| ++|++++ |+. ....+.+|+.||||+++|+|.. ++-+|.+|++.
T Consensus 177 Ep~~~~A~~~~~~-l~v~~st----Q~p-~~~r~~vA~~Lglp~~~VrV~~------~~vGGgFG~K~ 232 (777)
T 2w3s_B 177 EGQAALALPAEGG-VVIHCSS----QHP-SEIQHKVAHALGLAFHDVRVEM------RRMGGGFGGKE 232 (777)
T ss_dssp SCCEEEEEEETTE-EEEEESC----SCH-HHHHHHHHHHHTCCGGGEEEEE------CCCSCCTTTTT
T ss_pred cCCeEEEEEECCc-cEEEECC----cCH-HHHHHHHHHHHCCCHHHEEEEe------CCCCCCCCcCc
Confidence 5567777777677 9999754 433 4567888999999999999985 45567777775
No 19
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=84.73 E-value=1.6 Score=45.39 Aligned_cols=58 Identities=16% Similarity=0.138 Sum_probs=43.0
Q ss_pred CccceEEEEeeCCeEEEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchhh
Q psy14054 232 NQAGALVLIYVDGSVLISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDKVPNASPTAASVGS 300 (311)
Q Consensus 232 ~~~~a~v~l~~dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~~ 300 (311)
+...+....++||+++|++++ |+. ....+.+|+.||+|+++|+|.. |+-+|.+|++..
T Consensus 369 Ep~~~~A~~~~~g~l~v~~st----Q~p-~~~r~~lA~~Lglp~~~VrV~~------~~vGGgFG~K~~ 426 (907)
T 1vlb_A 369 EPDVAFAYMGDDGKCYIHSKS----IGV-HLHLYMIAPGVGLEPDQLVLVA------NPMGGTFGYKFS 426 (907)
T ss_dssp SCCEEEEEECTTSCEEEEESC----SCH-HHHHHHHHHHHTCCGGGEEEEE------CCCSCCTTGGGS
T ss_pred CCCeEEEEEcCCCcEEEEECC----cCh-HHHHHHHHHHhCCChhhEEEEe------CcCCCCCCCCcc
Confidence 556777777767999999754 433 4567888999999999999985 345666676643
No 20
>1ffv_B CUTL, molybdoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.41.1.1 d.133.1.1 PDB: 1ffu_B*
Probab=84.63 E-value=1.7 Score=44.45 Aligned_cols=59 Identities=15% Similarity=0.112 Sum_probs=44.0
Q ss_pred cCccceEEEEee-CCeEEEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchhh
Q psy14054 231 LNQAGALVLIYV-DGSVLISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDKVPNASPTAASVGS 300 (311)
Q Consensus 231 ~~~~~a~v~l~~-dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~~ 300 (311)
.+...+....++ ||+++|++++ |+. ....+.+|+.||||+++|+|.. |+-+|.+|++..
T Consensus 214 mEp~~~~A~~~~~~g~l~v~~st----Q~p-~~~r~~lA~~Lglp~~~VrV~~------~~vGGgFG~K~~ 273 (803)
T 1ffv_B 214 LETCGCVASFDPIKGDLTTYITS----QAP-HVVRTVVSMLSGIPESKVRIVS------PDIGGGFGNKVG 273 (803)
T ss_dssp SSCCEEEEEEETTTTEEEEEECC----SCH-HHHHHHHHHHHCCCGGGEEEEC------CCCSCCTTTTSS
T ss_pred CCCceEEEEEeCCCceEEEEECC----CCH-HHHHHHHHHHhCCCHHHEEEEe------CCCCCCCCcccc
Confidence 356677777775 7999999755 333 4667888999999999999984 455677777753
No 21
>1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B*
Probab=83.52 E-value=2.1 Score=43.97 Aligned_cols=58 Identities=12% Similarity=0.068 Sum_probs=43.4
Q ss_pred cCccceEEEEee-CCeEEEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchh
Q psy14054 231 LNQAGALVLIYV-DGSVLISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDKVPNASPTAASVG 299 (311)
Q Consensus 231 ~~~~~a~v~l~~-dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~ 299 (311)
.+...+....++ ||+++|++++ |+. ....+.+|+.||||+++|+|.. |+-+|.+|++.
T Consensus 217 mEp~~~~A~~~~~~g~l~v~~st----Q~p-~~~r~~~A~~Lglp~~~VrV~~------~~vGGgFG~K~ 275 (809)
T 1n62_B 217 LETCQCVASMDKIKGELTLWGTF----QAP-HVIRTVVSLISGLPEHKIHVIA------PDIGGGFGNKV 275 (809)
T ss_dssp SSCCEEEEEEETTTTEEEEEECC----SSH-HHHHHHHHHHHCCCGGGEEEEC------CBCSCCTTTTS
T ss_pred CCCceEEEEEeCCCCeEEEEECC----cCh-HHHHHHHHHHhCCCHHHEEEEe------CCCCCCCcccc
Confidence 356677777775 7999999755 333 4667888899999999999984 44566777775
No 22
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=82.68 E-value=2.5 Score=43.96 Aligned_cols=57 Identities=16% Similarity=0.091 Sum_probs=42.4
Q ss_pred CccceEEEEeeCCeEEEEeCCCCCCCChHHHHHHHHHHHhCCC-CCcEEEecCCCCCCCCCCCcccchh
Q psy14054 232 NQAGALVLIYVDGSVLISHCGTEMGQGIHTKMIQVAARGLNIP-AELIFINETATDKVPNASPTAASVG 299 (311)
Q Consensus 232 ~~~~a~v~l~~dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~-~~~V~v~~~dT~~~p~~~~t~~Sr~ 299 (311)
+...+....++||+++|++++ |+. ......+|+.||+| +++|+|.. |+-+|.+|++.
T Consensus 370 Ep~~~~A~~~~~g~l~v~~st----Q~p-~~~r~~lA~~Lglp~~~~VrV~~------~~vGGgFG~K~ 427 (907)
T 1dgj_A 370 EPDVGYGYINEQGQVVIHSKS----VAI-HLHALMIAPGLGLEFPKDLVLVQ------NTTGGTFGYKF 427 (907)
T ss_dssp SCCEEEEEECTTSCEEEEECC----SCH-HHHHHHHHHHHTCCTTTTEEEEE------CBCSCCTTGGG
T ss_pred CCCeEEEEEcCCCcEEEEECC----cCH-HHHHHHHHHHhCCCCCccEEEEe------CCCCCCCCCCc
Confidence 456677777767999999754 433 35577888999999 99999985 34566666664
No 23
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=81.92 E-value=3.1 Score=31.52 Aligned_cols=46 Identities=4% Similarity=0.187 Sum_probs=41.1
Q ss_pred eCCeEEEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCC
Q psy14054 242 VDGSVLISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDK 287 (311)
Q Consensus 242 ~dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~ 287 (311)
.++.+.|.+.+.+..--.+..+...+|+.|||+..+|.+..+.|+.
T Consensus 34 ~~~~LkV~v~ApP~dGkAN~ali~~LAk~l~V~ks~V~Iv~G~tSR 79 (108)
T 1n91_A 34 HGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGR 79 (108)
T ss_dssp CSSCEEEECCCCSSHHHHHHHHHHHHHHHTCCCTTTEEESSCTTSS
T ss_pred cCCEEEEEEecCCCCChHHHHHHHHHHHHhCCccceEEEEecCCCC
Confidence 4689999998888876788999999999999999999999988864
No 24
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=80.72 E-value=3.1 Score=45.06 Aligned_cols=58 Identities=12% Similarity=0.135 Sum_probs=42.2
Q ss_pred CccceEEEEe-eCCeEEEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchhh
Q psy14054 232 NQAGALVLIY-VDGSVLISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDKVPNASPTAASVGS 300 (311)
Q Consensus 232 ~~~~a~v~l~-~dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~~ 300 (311)
+...+....+ +||+++|++++ |+. ......+|+.||+|+++|+|.. ++-+|.+|++..
T Consensus 745 Ep~~~~A~~~~~~g~l~v~~sT----Q~p-~~~r~~vA~~Lglp~~kVrV~~------~~vGGgFG~K~~ 803 (1332)
T 3unc_A 745 ETHCTIAIPKGEEGEMELFVST----QNA-MKTQSFVAKMLGVPVNRILVRV------KRMGGGFGGKET 803 (1332)
T ss_dssp SCCEEEEEECSSTTCEEEEECC----SCH-HHHHHHHHHHHTCCGGGEEEEE------CCCSCCTTTTSS
T ss_pred CCceEEEEEeCCCCeEEEEECC----CCH-HHHHHHHHHHhCCCchhEEEEe------CCCCCCCCCCCc
Confidence 4566777776 68999999744 333 3556778899999999999985 445666666653
No 25
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=79.12 E-value=4 Score=44.24 Aligned_cols=57 Identities=18% Similarity=0.095 Sum_probs=40.9
Q ss_pred CccceEEEEe-eCCeEEEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchh
Q psy14054 232 NQAGALVLIY-VDGSVLISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDKVPNASPTAASVG 299 (311)
Q Consensus 232 ~~~~a~v~l~-~dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~ 299 (311)
+...+.+..+ +||+++|++++ |+. ......+|+.||||+++|+|.. |+-+|.+|++.
T Consensus 750 Ep~~~~a~~~~edg~l~v~~sT----Q~p-~~~r~~lA~~Lglp~~kVrV~~------~~vGGGFG~K~ 807 (1335)
T 3zyv_A 750 ETQSVRVVPKGEDKEMDIYVSS----QDA-AFTQEMVARTLGIPKNRINCHV------KRVGGAFGGKA 807 (1335)
T ss_dssp SCCEEEEEECSSTTCEEEEECC----SCH-HHHHHHHHHHHTCCGGGEEEEE------SCCSCCTTTTS
T ss_pred CCcceEEEEECCCCeEEEEECC----cCH-HHHHHHHHHHHCCCCceEEEEe------CCccCCCCccc
Confidence 4455666666 58999999754 444 3456777899999999999985 44566666664
No 26
>2nlv_A XISI protein-like; XISI-like protein, structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.30A {Anabaena variabilis} SCOP: d.326.1.1
Probab=72.71 E-value=5.1 Score=30.55 Aligned_cols=42 Identities=19% Similarity=0.277 Sum_probs=32.4
Q ss_pred cceEEEEe-eCCeEEEEeCCCCCCCChHHHHHHHHHHH---hCCCCCcEEEecCCC
Q psy14054 234 AGALVLIY-VDGSVLISHCGTEMGQGIHTKMIQVAARG---LNIPAELIFINETAT 285 (311)
Q Consensus 234 ~~a~v~l~-~dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~---Lgi~~~~V~v~~~dT 285 (311)
..+.|.++ .||+|.|..-.+|.| +|++ +|||.++|.+-.-..
T Consensus 56 ~g~~iHidIkd~KIWIq~d~TE~g----------Ia~eLv~~GVpk~dIVLgF~~P 101 (112)
T 2nlv_A 56 YRCVIHFDIKDGKIWLQQNLTDRN----------PAEELVMMGVPREDIVLGLQAP 101 (112)
T ss_dssp EEEEEEEEEETTEEEEEEECSSSC----------HHHHHHHTTCCGGGEEETTSCG
T ss_pred EEEEEEEEEECCeEEEEeCCcccc----------HHHHHHHcCCCHHHEEEccCCc
Confidence 46677776 699999999999998 2333 499999999865433
No 27
>2nwv_A XISI protein-like; YP_323822.1, structural genomics, PSI-2, structure initiative, joint center for structural genomics; 1.85A {Anabaena variabilis} SCOP: d.326.1.1
Probab=71.12 E-value=5.7 Score=30.34 Aligned_cols=42 Identities=21% Similarity=0.149 Sum_probs=32.3
Q ss_pred cceEEEEe-eCCeEEEEeCCCCCCCChHHHHHHHHHHH---hCCCCCcEEEecCCC
Q psy14054 234 AGALVLIY-VDGSVLISHCGTEMGQGIHTKMIQVAARG---LNIPAELIFINETAT 285 (311)
Q Consensus 234 ~~a~v~l~-~dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~---Lgi~~~~V~v~~~dT 285 (311)
..+.|.++ .||+|.|..-.+|.| +|++ +|||.++|.+-.-..
T Consensus 58 ~g~~iHidIkd~KIWIq~d~TE~g----------Ia~eLv~~GVpk~dIVLgF~~P 103 (114)
T 2nwv_A 58 KYTYVHIRIKNEKIYIEEDYTEEG----------IATELMRLGVTNNDIVLAFHPP 103 (114)
T ss_dssp EEEEEEEEEETTEEEEEEECCSSC----------HHHHHHHTTCCGGGEEETTSCG
T ss_pred EEEEEEEEEECCeEEEEeCCcccc----------HHHHHHHcCCCHHHEEEccCCc
Confidence 46777776 699999999999998 2333 499999999865433
No 28
>3d7q_A XISI protein-like; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.30A {Nostoc punctiforme pcc 73102}
Probab=67.83 E-value=8.1 Score=29.40 Aligned_cols=40 Identities=20% Similarity=0.213 Sum_probs=31.5
Q ss_pred cceEEEEe-eCCeEEEEeCCCCCCCChHHHHHHHHHHH---hCCCCCcEEEecC
Q psy14054 234 AGALVLIY-VDGSVLISHCGTEMGQGIHTKMIQVAARG---LNIPAELIFINET 283 (311)
Q Consensus 234 ~~a~v~l~-~dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~---Lgi~~~~V~v~~~ 283 (311)
..+.|.++ .||+|.|..-.+|.| +|++ +|||.++|.+-.-
T Consensus 56 ~g~~iHidIkd~KIWIq~d~TE~g----------Ia~eLv~~GVpk~dIVLgF~ 99 (112)
T 3d7q_A 56 YGPIMHLDIKNNKIWIQQNTTEAD----------IALELMEMGIDKQDIVIGFH 99 (112)
T ss_dssp EEEEEEEEEETTEEEEEEECSSCC----------HHHHHHTTTCCGGGEEETTS
T ss_pred EEEEEEEEEECCeEEEEeCCcccc----------HHHHHHHcCCCHHHEEEccC
Confidence 46777776 699999999999998 3444 4999999988653
No 29
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=67.60 E-value=2.8 Score=27.94 Aligned_cols=26 Identities=19% Similarity=0.116 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCC
Q psy14054 261 TKMIQVAARGLNIPAELIFINETATD 286 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT~ 286 (311)
..+.+.+++.||+++++|.|...+..
T Consensus 20 ~~it~~~~~~lg~~~~~v~V~i~E~~ 45 (62)
T 3m20_A 20 ERLTSVAAEIYGMDRSAITILIHEPP 45 (62)
T ss_dssp HHHHHHHHHHHTCCTTSCEEEEECCC
T ss_pred HHHHHHHHHHhCcCcceEEEEEEEeC
Confidence 56788899999999999999886654
No 30
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=66.73 E-value=1.8 Score=32.88 Aligned_cols=27 Identities=19% Similarity=0.284 Sum_probs=23.6
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCCC
Q psy14054 261 TKMIQVAARGLNIPAELIFINETATDK 287 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~ 287 (311)
..+.+.+.+.|||++++|-|...|.+.
T Consensus 77 ~~i~~~l~~~Lgi~~~riyI~f~d~~~ 103 (114)
T 3djh_A 77 KLLCGLLAERLRISPDRVYINYYDMNA 103 (114)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEEEECCG
T ss_pred HHHHHHHHHHhCcCcceEEEEEEECCH
Confidence 577899999999999999999887753
No 31
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=63.15 E-value=3.9 Score=32.02 Aligned_cols=25 Identities=16% Similarity=0.181 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCC
Q psy14054 261 TKMIQVAARGLNIPAELIFINETAT 285 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT 285 (311)
..+++.+.+.|||++++|-|...|.
T Consensus 99 ~~i~~~l~~~LgI~~~riyI~f~d~ 123 (133)
T 3fwu_A 99 SIVTAAITKECGIVADRIFVLYFSP 123 (133)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEEECC
T ss_pred HHHHHHHHHHhCcChhhEEEEEEEH
Confidence 5778999999999999999998887
No 32
>3kan_A D-dopachrome tautomerase; immune response, cytokine, cytokine-inhibitor C; HET: RW1; 1.13A {Homo sapiens} SCOP: d.80.1.3 PDB: 1dpt_A* 3ker_A*
Probab=62.92 E-value=2.9 Score=31.92 Aligned_cols=37 Identities=11% Similarity=0.111 Sum_probs=28.0
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchh
Q psy14054 261 TKMIQVAARGLNIPAELIFINETATDKVPNASPTAASVG 299 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~ 299 (311)
..+.++..++|||++++|-|...|.+. +.+|-.|+..
T Consensus 78 ~~i~~~l~~~Lgi~~~RiyI~f~d~~~--~~~G~nG~tf 114 (117)
T 3kan_A 78 AHFFEFLTKELALGQDRILIRFFPLES--WQIGKIGTVM 114 (117)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEEEECG--GGCEETTEEG
T ss_pred HHHHHHHHHHhCcCcCeEEEEEEEcCH--HHeeeCCEEe
Confidence 577999999999999999999877663 3344445443
No 33
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=62.58 E-value=4.9 Score=30.04 Aligned_cols=26 Identities=15% Similarity=0.123 Sum_probs=22.6
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCC
Q psy14054 261 TKMIQVAARGLNIPAELIFINETATD 286 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT~ 286 (311)
..+.+.+.+.||+++++|.|...|..
T Consensus 78 ~~i~~~l~~~lgi~~~~v~I~~~e~~ 103 (112)
T 3b64_A 78 SIVTAAITKECGIVADRIFVLYFSPL 103 (112)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEEECCS
T ss_pred HHHHHHHHHHhCcCcceEEEEEEEhh
Confidence 56788899999999999999987766
No 34
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=59.20 E-value=4 Score=27.52 Aligned_cols=26 Identities=15% Similarity=0.115 Sum_probs=22.1
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCC
Q psy14054 261 TKMIQVAARGLNIPAELIFINETATD 286 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT~ 286 (311)
..+.+.+++.||+|+++|.|...+..
T Consensus 24 ~~lt~~l~~~lg~p~~~v~V~i~e~~ 49 (67)
T 3m21_A 24 EGVSDLMVKVLNKNKASIVVIIDEVD 49 (67)
T ss_dssp HHHHHHHHHHHCCCGGGCEEEEEECC
T ss_pred HHHHHHHHHHHCcCcccEEEEEEEeC
Confidence 56788999999999999999876554
No 35
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=59.07 E-value=4 Score=31.90 Aligned_cols=26 Identities=23% Similarity=0.373 Sum_probs=22.9
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCC
Q psy14054 261 TKMIQVAARGLNIPAELIFINETATD 286 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT~ 286 (311)
..+++.+.+.|||++++|-|...|..
T Consensus 99 ~~i~~~l~~~LgI~~~rvyI~f~d~~ 124 (133)
T 3fwt_A 99 PRIAAAITKECGIPAERIYVFYYSTK 124 (133)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEEEEES
T ss_pred HHHHHHHHHHhCcChhhEEEEEEEhh
Confidence 57789999999999999999987765
No 36
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Giardia lamblia}
Probab=58.10 E-value=5.6 Score=31.17 Aligned_cols=30 Identities=10% Similarity=0.241 Sum_probs=23.6
Q ss_pred ChHHHHHHHHHHHhCCCCCcEEEecCCCCC
Q psy14054 258 GIHTKMIQVAARGLNIPAELIFINETATDK 287 (311)
Q Consensus 258 G~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~ 287 (311)
.....+++.+.+.|||++++|-|...|.+.
T Consensus 96 ~~s~~i~~~l~~~Lgi~~~riyI~f~d~~~ 125 (135)
T 3t5s_A 96 SISAAITGCLTQHFKVKPERVYISFNEAKG 125 (135)
T ss_dssp HHHHHHHHHHHHHHCCCGGGEEEEEEC---
T ss_pred hHHHHHHHHHHHhcccCccEEEEEeccccC
Confidence 344788999999999999999999887753
No 37
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=56.69 E-value=4.7 Score=30.27 Aligned_cols=28 Identities=21% Similarity=0.278 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHhCCCCCcEEEecCCCCC
Q psy14054 260 HTKMIQVAARGLNIPAELIFINETATDK 287 (311)
Q Consensus 260 ~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~ 287 (311)
-..+.+.+.+.||+++++|.|...+...
T Consensus 77 ~~~i~~~l~~~lgi~~~~v~I~~~e~~~ 104 (115)
T 2xcz_A 77 SELVCGHIEQNLGIPADRIYIGFEDVPA 104 (115)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEEEECCG
T ss_pred HHHHHHHHHHHhCcCcccEEEEEEECCH
Confidence 3577889999999999999998876653
No 38
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=54.38 E-value=5.4 Score=30.21 Aligned_cols=27 Identities=19% Similarity=0.305 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCCC
Q psy14054 261 TKMIQVAARGLNIPAELIFINETATDK 287 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~ 287 (311)
..+.+.+.+.||+++++|.|...+...
T Consensus 78 ~~i~~~l~~~lgi~~~~v~I~~~e~~~ 104 (119)
T 2os5_A 78 QKITQFCQDTLKLPKDKVIITYFDLQP 104 (119)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEEEECCG
T ss_pred HHHHHHHHHHhCcCcccEEEEEEECCH
Confidence 566888999999999999998876653
No 39
>2aal_A Malonate semialdehyde decarboxylase; tautomerase superfamily, beta-alpha-beta, homotrimeric, LYAS; 1.65A {Pseudomonas pavonaceae} SCOP: d.80.1.6 PDB: 2aag_A 2aaj_A
Probab=54.13 E-value=5.7 Score=30.65 Aligned_cols=40 Identities=8% Similarity=0.032 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchhhhh
Q psy14054 261 TKMIQVAARGLNIPAELIFINETATDKVPNASPTAASVGSDL 302 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~~~~ 302 (311)
..+.+.+++.||+++++|.|...+... ..++-+|....+.
T Consensus 86 ~~l~~~l~~~lg~~~~~v~I~i~e~~~--~~wg~gG~~~q~~ 125 (131)
T 2aal_A 86 KLLTGALERDCGISPDDVIVALVENSD--ADWSFGRGRAEFL 125 (131)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEEEECCG--GGEECBTTBCHHH
T ss_pred HHHHHHHHHHhCcCcccEEEEEEEcCH--HHeeECCEEhhhc
Confidence 566888999999999999999877663 3345555554444
No 40
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=53.76 E-value=4.6 Score=30.34 Aligned_cols=27 Identities=26% Similarity=0.457 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCCC
Q psy14054 261 TKMIQVAARGLNIPAELIFINETATDK 287 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~ 287 (311)
..+.+.+.+.||+++++|.|...+...
T Consensus 78 ~~i~~~l~~~lgi~~~~v~I~~~e~~~ 104 (115)
T 1uiz_A 78 KLLCDILTKQLNIPANRVYINYYDLNA 104 (115)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEEEECCG
T ss_pred HHHHHHHHHHhCcCcceEEEEEEECCH
Confidence 566888999999999999998876653
No 41
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=53.75 E-value=3.9 Score=27.00 Aligned_cols=26 Identities=19% Similarity=0.193 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCC
Q psy14054 261 TKMIQVAARGLNIPAELIFINETATD 286 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT~ 286 (311)
..+.+.+++.||+|+++|.|...+..
T Consensus 22 ~~lt~~l~~~lg~~~~~v~V~i~e~~ 47 (64)
T 3abf_A 22 RRLTEMASRLLGEPYEEVRVILYEVR 47 (64)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEEEC
T ss_pred HHHHHHHHHHhCCCcccEEEEEEEcC
Confidence 57789999999999999999876654
No 42
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=53.44 E-value=4.7 Score=30.15 Aligned_cols=26 Identities=19% Similarity=0.354 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCC
Q psy14054 261 TKMIQVAARGLNIPAELIFINETATD 286 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT~ 286 (311)
..+.+.+.+.||+++++|.|...+..
T Consensus 77 ~~i~~~l~~~lgi~~~~v~I~~~e~~ 102 (113)
T 1hfo_A 77 AKLFDHLNTKLGIPKNRMYIHFVNLN 102 (113)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEEEECC
T ss_pred HHHHHHHHHHhCcCcCeEEEEEEECC
Confidence 56688899999999999999887665
No 43
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=53.25 E-value=4.7 Score=30.32 Aligned_cols=27 Identities=19% Similarity=0.317 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCCC
Q psy14054 261 TKMIQVAARGLNIPAELIFINETATDK 287 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~ 287 (311)
..+.+.+.+.|||++++|.|...|.+.
T Consensus 78 ~~i~~~l~~~Lgi~~~riyI~f~d~~~ 104 (114)
T 4dh4_A 78 AALSAACERHLGVPKNRIYTTFTNKSP 104 (114)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEEEEECG
T ss_pred HHHHHHHHHHhCcCcccEEEEEEeCCH
Confidence 577899999999999999999877653
No 44
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=53.11 E-value=5.5 Score=30.53 Aligned_cols=28 Identities=11% Similarity=0.262 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHhCCCCCcEEEecCCCCC
Q psy14054 260 HTKMIQVAARGLNIPAELIFINETATDK 287 (311)
Q Consensus 260 ~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~ 287 (311)
-..+.+.+.+.||+++++|.|...+...
T Consensus 77 ~~~i~~~l~~~lgi~~~~v~I~~~e~~~ 104 (125)
T 2wkb_A 77 ADKITKILSNHLSVKPRRVYIEFRDCSA 104 (125)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEEEC---
T ss_pred HHHHHHHHHHHhCcCcceEEEEEEECCH
Confidence 3677889999999999999998877653
No 45
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=52.93 E-value=4.4 Score=26.41 Aligned_cols=26 Identities=12% Similarity=0.073 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCC
Q psy14054 261 TKMIQVAARGLNIPAELIFINETATD 286 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT~ 286 (311)
..+.+.+.+.||+++++|.|...+.+
T Consensus 21 ~~i~~~l~~~lg~~~~~v~V~i~e~~ 46 (61)
T 2opa_A 21 EKVTEAVKETTGASEEKIVVFIEEMR 46 (61)
T ss_dssp HHHHHHHHHHHCCCGGGCEEEEEEEC
T ss_pred HHHHHHHHHHhCcCcCeEEEEEEEcC
Confidence 56788899999999999999876654
No 46
>2nvm_A FDXN element excision controlling factor XISI; YP_321976.1, structural genomics, PSI-2, protein structure initiative; 2.19A {Anabaena variabilis atcc 29413} SCOP: d.326.1.1
Probab=50.80 E-value=19 Score=27.90 Aligned_cols=40 Identities=15% Similarity=0.254 Sum_probs=30.6
Q ss_pred cceEEEEe-eCCeEEEEeCCCCCCCChHHHHHHHHHHH---hCCCCCcEEEecC
Q psy14054 234 AGALVLIY-VDGSVLISHCGTEMGQGIHTKMIQVAARG---LNIPAELIFINET 283 (311)
Q Consensus 234 ~~a~v~l~-~dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~---Lgi~~~~V~v~~~ 283 (311)
..+.+.++ .||++.|..-.+|.| +|++ +|||.++|.+-.-
T Consensus 70 ~~~iiHldIkdgKIWIq~D~TE~g----------Ia~eLv~~GIPk~DIVLgFh 113 (126)
T 2nvm_A 70 QHIILYLQIQNGKIWIEEDSTNLA----------IVDEMLVAGIPQTDIILGFH 113 (126)
T ss_dssp EEEEEEEEEETTEEEEEECSSTTH----------HHHHHHHTTCCGGGEEETTS
T ss_pred EEEEEEEEEeCCeEEEEeCCchhh----------HHHHHHHcCCCHHHEEEccC
Confidence 46667776 699999999888887 2333 4999999998653
No 47
>3ej9_B Beta-subunit of trans-3-chloroacrylic acid dehalo; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej7_B 3ej3_B 1s0y_B
Probab=50.78 E-value=6.5 Score=27.16 Aligned_cols=25 Identities=12% Similarity=0.222 Sum_probs=21.4
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCC
Q psy14054 261 TKMIQVAARGLNIPAELIFINETAT 285 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT 285 (311)
..+.|.+.|.||+|++.|+|...+-
T Consensus 21 ~~VT~a~~eslgap~esVrVlItE~ 45 (70)
T 3ej9_B 21 RDVIDVTNKSIGSDPKIINVLLVEH 45 (70)
T ss_dssp HHHHHHHHHHHCCCGGGCEEEEEEE
T ss_pred HHHHHHHHHHcCCChHHEEEEeeeC
Confidence 4568999999999999999987553
No 48
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=49.34 E-value=4.3 Score=26.54 Aligned_cols=26 Identities=19% Similarity=0.220 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCC
Q psy14054 261 TKMIQVAARGLNIPAELIFINETATD 286 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT~ 286 (311)
..+.+.+.+.||+|+++|.|...+.+
T Consensus 21 ~~i~~~l~~~lg~p~~~v~v~i~e~~ 46 (62)
T 1otf_A 21 RQVSEAMANSLDAPLERVRVLITEMP 46 (62)
T ss_dssp HHHHHHHHHHHTCCGGGCEEEEEEEC
T ss_pred HHHHHHHHHHhCcCcccEEEEEEEeC
Confidence 56788899999999999999876554
No 49
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=49.33 E-value=4.9 Score=27.52 Aligned_cols=26 Identities=12% Similarity=0.161 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCC
Q psy14054 261 TKMIQVAARGLNIPAELIFINETATD 286 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT~ 286 (311)
..+.+.+++.||+|+++|.|...+..
T Consensus 22 ~~it~~l~~~lg~p~~~v~V~i~e~~ 47 (72)
T 3mb2_A 22 RALSAAAAAAFDVPLAEVRLIIQEVP 47 (72)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEEEEC
T ss_pred HHHHHHHHHHhCCCcccEEEEEEEcC
Confidence 56788999999999999999876654
No 50
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=48.06 E-value=5.8 Score=26.46 Aligned_cols=26 Identities=19% Similarity=0.212 Sum_probs=22.0
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCC
Q psy14054 261 TKMIQVAARGLNIPAELIFINETATD 286 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT~ 286 (311)
..+.+.+.+.||+|+++|.|...+.+
T Consensus 21 ~~it~~~~~~lg~p~~~v~V~i~e~~ 46 (65)
T 3ry0_A 21 EALTAAAHETLGTPVEAVRVIVEETP 46 (65)
T ss_dssp HHHHHHHHHHHCCCGGGCEEEEEEEC
T ss_pred HHHHHHHHHHhCcCcccEEEEEEEcC
Confidence 56788899999999999999876654
No 51
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=45.89 E-value=5.2 Score=27.88 Aligned_cols=26 Identities=19% Similarity=0.277 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCC
Q psy14054 261 TKMIQVAARGLNIPAELIFINETATD 286 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT~ 286 (311)
..+.+.+.+.||+|+++|.|...+.+
T Consensus 22 ~~it~~l~~~lg~p~~~v~V~i~E~~ 47 (76)
T 3ej9_A 22 AGLLRVISEATGEPRENIFFVIREGS 47 (76)
T ss_dssp HHHHHHHHHHHCCCGGGCEEEEEEEC
T ss_pred HHHHHHHHHHHCcCcccEEEEEEEeC
Confidence 56788899999999999999876554
No 52
>1mww_A Hypothetical protein HI1388.1; structural genomics, structure 2 function project, S2F, unknown function; HET: GLU; 2.08A {Haemophilus influenzae} SCOP: d.80.1.4
Probab=42.92 E-value=7 Score=29.95 Aligned_cols=27 Identities=15% Similarity=0.017 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhCCCCCcEEEecCCCC
Q psy14054 260 HTKMIQVAARGLNIPAELIFINETATD 286 (311)
Q Consensus 260 ~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~ 286 (311)
-..+++.+++.||+++++|.|...+..
T Consensus 79 ~~~l~~~l~~~lg~~~~~v~V~i~e~~ 105 (128)
T 1mww_A 79 IKMLFSELEYKLGIRAHDVEITIKEQP 105 (128)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEEEEEC
T ss_pred HHHHHHHHHHHhCcChhhEEEEEEECC
Confidence 356788999999999999999877655
No 53
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=42.53 E-value=8.6 Score=24.86 Aligned_cols=27 Identities=4% Similarity=0.047 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHhCCCCCcEEEecCCCC
Q psy14054 260 HTKMIQVAARGLNIPAELIFINETATD 286 (311)
Q Consensus 260 ~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~ 286 (311)
-..+.+.+++.||+|.++|.|...+-+
T Consensus 23 ~~~l~~~l~~~lg~p~~~v~v~i~e~~ 49 (63)
T 2x4k_A 23 VSEVTDAVEKTTGANRQAIHVVIEEMK 49 (63)
T ss_dssp HHHHHHHHHHHHCCCGGGCEEEEEEEC
T ss_pred HHHHHHHHHHHhCcCcccEEEEEEEcC
Confidence 367788999999999999999765543
No 54
>2v4i_A Glutamate N-acetyltransferase 2 alpha chain; cytoplasm, acyl enzyme, NTN hydrolase, acyltransferase, ornithine acetyl transferase; 2.2A {Streptomyces clavuligerus} PDB: 2vzk_A* 2w4n_A* 2yep_A*
Probab=42.44 E-value=28 Score=28.54 Aligned_cols=37 Identities=19% Similarity=0.418 Sum_probs=30.5
Q ss_pred EEEEeCCCCCCCChH-----HHHHHHHHHHhCCCCCcEEEec
Q psy14054 246 VLISHCGTEMGQGIH-----TKMIQVAARGLNIPAELIFINE 282 (311)
Q Consensus 246 v~v~~g~~d~GqG~~-----t~~~Qi~Ae~Lgi~~~~V~v~~ 282 (311)
|.|+.|.....+|.. ..+++.+|+.||+++++|-+..
T Consensus 62 vvvNSGnANA~TG~~G~~da~~~~~~~A~~lg~~~~~Vlv~S 103 (173)
T 2v4i_A 62 VVVLARNANVATGLEGEENAREVREAVARALGLPEGEMLIAS 103 (173)
T ss_dssp EEEEESCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred EEEcCCCccccccHHHHHHHHHHHHHHHHHhCCCchhEEEec
Confidence 778888888876543 4669999999999999999874
No 55
>2lfc_A Fumarate reductase, flavoprotein subunit; structural genomics, northeast structural genomics consortiu PSI-biology; NMR {Lactobacillus plantarum}
Probab=40.22 E-value=15 Score=29.32 Aligned_cols=17 Identities=6% Similarity=0.001 Sum_probs=14.9
Q ss_pred HHHHHHHcCCCHHHHHH
Q psy14054 144 GHHVAQFLKLDYADFAR 160 (311)
Q Consensus 144 mDelA~~lg~DP~e~R~ 160 (311)
++|||+++|+||..|..
T Consensus 98 leeLA~~~gid~~~L~~ 114 (160)
T 2lfc_A 98 LESAAEQAGIVVDELVQ 114 (160)
T ss_dssp HHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHhCCCHHHHHH
Confidence 89999999999987653
No 56
>3mb2_B 4-oxalocrotonate tautomerase family enzyme - beta; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=39.97 E-value=19 Score=24.93 Aligned_cols=26 Identities=8% Similarity=0.060 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHhCCCCCcEEEecCCC
Q psy14054 260 HTKMIQVAARGLNIPAELIFINETAT 285 (311)
Q Consensus 260 ~t~~~Qi~Ae~Lgi~~~~V~v~~~dT 285 (311)
-+.+..+.+|.||++++.|.|+..+-
T Consensus 22 aeE~T~if~evLGcpPgsV~IVi~EV 47 (72)
T 3mb2_B 22 AAEASAIFQRVIGTPPGRLQLIIQIV 47 (72)
T ss_dssp HHHHHHHHHHHHCCCTTCCEEEEEEC
T ss_pred HHHHHHHHHHHhCCCCCcEEEEEEec
Confidence 35678889999999999999986543
No 57
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=38.76 E-value=15 Score=25.30 Aligned_cols=27 Identities=22% Similarity=0.170 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhCCCCCcEEEecCCCC
Q psy14054 260 HTKMIQVAARGLNIPAELIFINETATD 286 (311)
Q Consensus 260 ~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~ 286 (311)
-..+.+.+.+.||+++++|.|...+.+
T Consensus 21 ~~~l~~~l~~~lgip~~~v~V~i~e~~ 47 (76)
T 1gyx_A 21 AADITDVIIRHLNSKDSSISIALQQIQ 47 (76)
T ss_dssp HHHHHHHHHHHHTCCGGGCEEEEEECC
T ss_pred HHHHHHHHHHHhCcCCceEEEEEEEeC
Confidence 356788899999999999999876654
No 58
>1iv3_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; isoprenoid, non-mevalonate, riken structural genomics/proteomics initiative, RSGI; 1.52A {Thermus thermophilus} SCOP: d.79.5.1 PDB: 1iv2_A 1iv4_A* 1iv1_A
Probab=35.66 E-value=58 Score=26.02 Aligned_cols=42 Identities=10% Similarity=0.260 Sum_probs=31.4
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCCC
Q psy14054 247 LISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDKVP 289 (311)
Q Consensus 247 ~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p 289 (311)
+|.+-..-++. ....+.+-+|+.||+++++|.|....|+...
T Consensus 97 tii~q~PKi~p-~~~~m~~~ia~~L~~~~~~V~vKAtT~E~LG 138 (152)
T 1iv3_A 97 VLTLDRPKLGP-HRKALVDSLSRLMRLPQDRIGLTFKTSEGLA 138 (152)
T ss_dssp EEECSSSCCGG-GHHHHHHHHHHHHTCCGGGEEEEEECCTTSS
T ss_pred EEEecCCcCHH-HHHHHHHHHHHHhCCCCceEEEEEecCCCCC
Confidence 34333344443 6688999999999999999999987777543
No 59
>3mlc_A FG41 malonate semialdehyde decarboxylase; tautomerase superfamily, malonate semialdehyde decarboxylase alpha-beta-motif; 2.22A {Coryneform bacterium} SCOP: d.80.1.0 PDB: 3mjz_A
Probab=34.60 E-value=10 Score=29.67 Aligned_cols=40 Identities=8% Similarity=0.081 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCCCCCCCCCcccchhhhhh
Q psy14054 261 TKMIQVAARGLNIPAELIFINETATDKVPNASPTAASVGSDLN 303 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~p~~~~t~~Sr~~~~~ 303 (311)
..+++.+ +.||+++++|.|...++.. ..++.+|.+.-+..
T Consensus 86 ~~it~~l-~~lg~~~~~v~V~i~E~~~--~~W~~ggG~aq~~~ 125 (136)
T 3mlc_A 86 AAITESL-APIGVAGSDVFIAITENAP--HDWSFGFGSAQYVT 125 (136)
T ss_dssp HHHHHHH-TTTTCCGGGEEEEEEEECG--GGEECBTTBCHHHH
T ss_pred HHHHHHH-HHcCCCcccEEEEEEEcCH--HHeeecCcEeeecc
Confidence 5667778 9999999999999876653 34555555554443
No 60
>1t0a_A 2C-methyl-D-erythritol 2,4-cyclodiphosphate synth; mixed alpha beta, homotrimer, synthase, lyase; HET: FPP; 1.60A {Shewanella oneidensis} SCOP: d.79.5.1 PDB: 1vh8_A* 1vha_A* 1jn1_A 3fpi_A* 3f6m_A*
Probab=32.82 E-value=58 Score=26.21 Aligned_cols=40 Identities=30% Similarity=0.257 Sum_probs=30.4
Q ss_pred EEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCC
Q psy14054 248 ISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDKV 288 (311)
Q Consensus 248 v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~ 288 (311)
|..-..-++. ....+.+-+|+.||+++++|.|....|+..
T Consensus 100 ii~q~PKi~p-~~~~m~~~ia~~L~~~~~~V~vKAtT~E~L 139 (159)
T 1t0a_A 100 IIAQAPKMAP-HIEDMRQVLAADLNADVADINVKATTTEKL 139 (159)
T ss_dssp EECSSSCCGG-GHHHHHHHHHHHTTCCGGGEEEEEECCTTC
T ss_pred EEcCCCcChH-HHHHHHHHHHHHhCCCCceEEEEEecCCCC
Confidence 3333344443 668899999999999999999998777654
No 61
>1vra_A Arginine biosynthesis bifunctional protein ARGJ; 10175521, S genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.00A {Bacillus halodurans}
Probab=32.59 E-value=32 Score=29.00 Aligned_cols=37 Identities=16% Similarity=0.278 Sum_probs=29.0
Q ss_pred EEEEeCCCCCCCCh---H--HHHHHHHHHHhCCCCCcEEEec
Q psy14054 246 VLISHCGTEMGQGI---H--TKMIQVAARGLNIPAELIFINE 282 (311)
Q Consensus 246 v~v~~g~~d~GqG~---~--t~~~Qi~Ae~Lgi~~~~V~v~~ 282 (311)
|.|+.|.....+|. + ..+++.+|+.|||++++|-+..
T Consensus 93 vvvNSGnANA~TG~~G~~da~~~a~~~A~~lgi~~~~VlvaS 134 (208)
T 1vra_A 93 MIVNSGIANACTGKRGLDDAYTMRAVGAETFHIPEHYVAVTS 134 (208)
T ss_dssp EEEEEEECCCSCHHHHHHHHHHHHHHHHHHHTSCGGGEEEEE
T ss_pred EEEccCCccccccHHHHHHHHHHHHHHHHHhCCChhHEEEeC
Confidence 66677777776654 3 4669999999999999998874
No 62
>2pmp_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; plant enzymes, MEP pathway, isoprenoid proteins, CMP, zinc IONS, lyase; HET: C5P; 2.30A {Arabidopsis thaliana}
Probab=32.18 E-value=60 Score=26.16 Aligned_cols=41 Identities=7% Similarity=0.097 Sum_probs=31.1
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCC
Q psy14054 247 LISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDKV 288 (311)
Q Consensus 247 ~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~ 288 (311)
+|.+-..-++. ....+.+-+|+.||++.++|.|....|+..
T Consensus 100 tii~q~PKi~p-~~~~m~~~ia~~L~~~~~~V~vKAtT~E~L 140 (160)
T 2pmp_A 100 TLILQRPKISP-HKETIRSNLSKLLGADPSVVNLKAKTHEKV 140 (160)
T ss_dssp EEECSSSCCGG-GHHHHHHHHHHHHTCCGGGEEEEEECCTTC
T ss_pred EEEecCCcCHH-HHHHHHHHHHHHHCCCcceEEEEEecCCCC
Confidence 34333344553 678899999999999999999998777754
No 63
>2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora}
Probab=31.73 E-value=36 Score=25.36 Aligned_cols=28 Identities=14% Similarity=0.224 Sum_probs=23.2
Q ss_pred CCCCChHHHHHHHHHHHhCCCCCcEEEe
Q psy14054 254 EMGQGIHTKMIQVAARGLNIPAELIFIN 281 (311)
Q Consensus 254 d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~ 281 (311)
+.-..+...+.++++|.||++++.|+..
T Consensus 10 ~~~~~I~~~V~~ilaE~lev~~e~Vtpd 37 (102)
T 2l9f_A 10 PAATGALELVRHLVAERAELPVEVLRDD 37 (102)
T ss_dssp SSSCCHHHHHHHHHHHHTTSCSSSCCTT
T ss_pred chHHHHHHHHHHHHHHHHCCCHHHcCCC
Confidence 3445678899999999999999998654
No 64
>1gx1_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; isoprenoid, lyase, isoprene biosynthesis; HET: CDP; 1.8A {Escherichia coli} SCOP: d.79.5.1 PDB: 1h47_A* 1h48_A* 3ern_A* 3eor_A* 3elc_A* 3esj_A* 3fba_A* 2amt_A* 1knj_A* 1knk_A 1u3l_A* 1u3p_A 1u40_A* 1u43_A* 1jy8_A* 2gzl_A* 1yqn_A* 3ghz_A* 3t80_A*
Probab=31.65 E-value=62 Score=26.06 Aligned_cols=41 Identities=20% Similarity=0.136 Sum_probs=31.1
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCC
Q psy14054 247 LISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDKV 288 (311)
Q Consensus 247 ~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~ 288 (311)
+|..-..-++. ....+.+-+|+.||+++++|.|....|+..
T Consensus 98 tii~q~PKi~p-~~~~m~~~ia~~L~~~~~~V~vKAtT~E~L 138 (160)
T 1gx1_A 98 TIIAQAPKMLP-HIPQMRVFIAEDLGCHMDDVNVKATTTEKL 138 (160)
T ss_dssp EEECSSSCCGG-GHHHHHHHHHHHTTCCGGGEEEEEECCTTC
T ss_pred EEEcCCCcchH-HHHHHHHHHHHHhCCCCceEEEEEccCCCC
Confidence 34333344553 668899999999999999999998777654
No 65
>3re3_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; structural genomics, center for structural genomics of infec diseases, csgid; 2.65A {Francisella tularensis subsp} SCOP: d.79.5.0
Probab=31.03 E-value=62 Score=26.12 Aligned_cols=35 Identities=29% Similarity=0.225 Sum_probs=28.6
Q ss_pred CCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCC
Q psy14054 253 TEMGQGIHTKMIQVAARGLNIPAELIFINETATDKV 288 (311)
Q Consensus 253 ~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~ 288 (311)
.-++. ....+.+-+|+.||+++++|.|....|+..
T Consensus 109 PKl~p-~~~~m~~~la~~L~~~~~~V~vKAtT~E~L 143 (162)
T 3re3_A 109 PKMLP-HIEKMRACLANILEIQISQINIKATTTERL 143 (162)
T ss_dssp SCCGG-GHHHHHHHHHHHHTSCGGGEEEEEECCSSC
T ss_pred Ccchh-HHHHHHHHHHHHHCCCCceEEEEEecCCCc
Confidence 34443 568899999999999999999998777754
No 66
>3f0d_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; ssgcid, niaid, isoprene biosynthe lyase, metal-binding, structural genomics; 1.20A {Burkholderia pseudomallei} PDB: 3f0e_A 3f0f_A* 3f0g_A* 3ieq_A* 3iew_A* 3jvh_A* 3k14_A* 3k2x_A* 3ke1_A* 3mbm_A* 3p0z_A* 3p10_A* 3q8h_A* 3qhd_A* 3ikf_A* 3ike_A*
Probab=29.75 E-value=50 Score=27.21 Aligned_cols=35 Identities=14% Similarity=0.277 Sum_probs=28.5
Q ss_pred CCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCCC
Q psy14054 253 TEMGQGIHTKMIQVAARGLNIPAELIFINETATDKV 288 (311)
Q Consensus 253 ~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~~ 288 (311)
.-++. ....+.+-+|+.||+++++|.|....|+..
T Consensus 126 PKl~p-~~~~mr~~la~~L~i~~~~VnVKATT~E~L 160 (183)
T 3f0d_A 126 PKLAP-HIDAMRANIAADLDLPLDRVNVKAKTNEKL 160 (183)
T ss_dssp SCCGG-GHHHHHHHHHHHHTCCGGGEEEEEECCTTC
T ss_pred Ccchh-HHHHHHHHHHHHHCCCcceEEEEEecCCCC
Confidence 33443 568899999999999999999998877754
No 67
>3n4h_A Putative tautomerase; CG10062, CIS-3-chloroacrylic acid dehalogenase, tautomerase superfamily, beta-alpha-beta motif, hydrolase; HET: PR7; 2.02A {Corynebacterium glutamicum} PDB: 3n4d_A* 3n4g_A
Probab=25.76 E-value=31 Score=26.96 Aligned_cols=26 Identities=27% Similarity=0.293 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCC
Q psy14054 261 TKMIQVAARGLNIPAELIFINETATD 286 (311)
Q Consensus 261 t~~~Qi~Ae~Lgi~~~~V~v~~~dT~ 286 (311)
..+.+.+++.||+++++|.|...+..
T Consensus 83 ~~l~~~l~~~lgi~~~~v~V~i~E~~ 108 (148)
T 3n4h_A 83 LRLTQEIALILGIPNEEVWVYITEIP 108 (148)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEEEEC
T ss_pred HHHHHHHHHHhCcCcCcEEEEEEEcC
Confidence 56788899999999999999877655
No 68
>3plu_A Ubiquitin-like modifier HUB1; ubiquitin-like, HUB-1, SNU66, peptide binding protein; 1.40A {Saccharomyces cerevisiae} PDB: 3plv_A 1m94_A 1p0r_A
Probab=24.47 E-value=1.1e+02 Score=22.10 Aligned_cols=47 Identities=11% Similarity=0.103 Sum_probs=31.8
Q ss_pred ccceEEEEe--eCCeEEEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecC
Q psy14054 233 QAGALVLIY--VDGSVLISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINET 283 (311)
Q Consensus 233 ~~~a~v~l~--~dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~ 283 (311)
....+|.++ .+.++.|.+... -+-..+.|.+++..|+|++++++..+
T Consensus 19 ~~mIqI~Vk~~~Gkk~~v~v~p~----DTI~~LK~~I~~k~Gip~~qQrLif~ 67 (93)
T 3plu_A 19 SHMIEVVVNDRLGKKVRVKCLGE----DSVGDFKKVLSLQIGTQPNKIVLQKG 67 (93)
T ss_dssp -CEEEEEEECTTSCEEEEEEETT----SBHHHHHHHHHHHHTCCGGGEEEEET
T ss_pred CceEEEEEECCCCCEEEEEECCc----CHHHHHHHHHHHHhCCCHHHEEEEeC
Confidence 345566665 356777775332 13345688899999999999999864
No 69
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=24.40 E-value=79 Score=23.40 Aligned_cols=29 Identities=21% Similarity=0.295 Sum_probs=24.8
Q ss_pred CCChHHHHHHHHHHHhCCCCCcEEEecCC
Q psy14054 256 GQGIHTKMIQVAARGLNIPAELIFINETA 284 (311)
Q Consensus 256 GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~d 284 (311)
=+.....+.|.+++.||.|++.+.|..-+
T Consensus 16 ~~~l~~~~~~~l~~~lgkP~~~~~v~~~~ 44 (119)
T 2os5_A 16 PANFEERLTDLLAESMNKPRNRIAIEVLA 44 (119)
T ss_dssp CTTHHHHHHHHHHHHHTCCGGGCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHCcChHHEEEEEEC
Confidence 55677899999999999999999887644
No 70
>1jrm_A MTH0637, conserved hypothetical protein MTH637; alpha-beta protein, structural genomics, OCSP, NESG; NMR {Methanothermobacterthermautotrophicus} SCOP: d.206.1.1
Probab=23.34 E-value=43 Score=24.95 Aligned_cols=42 Identities=5% Similarity=0.017 Sum_probs=36.6
Q ss_pred CCeEEEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEecCCCCC
Q psy14054 243 DGSVLISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINETATDK 287 (311)
Q Consensus 243 dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~~ 287 (311)
++.+.|++.+.+..--.+..+...+|+.|| .+|.+..+.|+.
T Consensus 36 ~~~lkv~v~ApP~dGkAN~ali~~LAk~l~---s~V~i~~G~tsR 77 (104)
T 1jrm_A 36 RKRIEVKIHSPPQKGKANREIIKEFSETFG---RDVEIVSGQKSR 77 (104)
T ss_dssp TTCCCCCCCTTCCCCCHHHHHHHHHHHHHS---SEEEECSCGGGS
T ss_pred CCEEEEEEecCCCCChHHHHHHHHHHHHhC---CCEEEEecCCCC
Confidence 678899988888877789999999999999 999999887753
No 71
>3tuf_A Stage III sporulation protein AH; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_A
Probab=23.31 E-value=41 Score=28.12 Aligned_cols=47 Identities=15% Similarity=0.173 Sum_probs=35.8
Q ss_pred cceEEEEeeCCeEEEEeCCCCCCCChHHHHHHHHHHHhCCCCCcEEEec
Q psy14054 234 AGALVLIYVDGSVLISHCGTEMGQGIHTKMIQVAARGLNIPAELIFINE 282 (311)
Q Consensus 234 ~~a~v~l~~dG~v~v~~g~~d~GqG~~t~~~Qi~Ae~Lgi~~~~V~v~~ 282 (311)
.-|.|.+ .|++|.|.+-+-++..--...+..||...+||..+ |.|.+
T Consensus 147 ~DAVV~i-~dd~V~VVVka~~Ls~~eaaqI~DIV~r~tgv~~d-V~Vqf 193 (197)
T 3tuf_A 147 EDALVNA-EGDKINITVKSDKHSKSKATAIIDLVAKEIKTMKD-VAVTF 193 (197)
T ss_dssp SCEEEEC-SSSEEEEEEECSCCCHHHHHHHHHTSCHHHHTTSE-EEEEE
T ss_pred CceEEEe-cCCEEEEEEeCCCCCHHHHHHHHHHHHHhhCCCCc-eEEEe
Confidence 4577777 47778888766666665567889999999999888 88865
No 72
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=23.18 E-value=60 Score=23.87 Aligned_cols=30 Identities=10% Similarity=0.110 Sum_probs=23.9
Q ss_pred CChHHHHHHHHHHHhCCCCCcEEEecCCCC
Q psy14054 257 QGIHTKMIQVAARGLNIPAELIFINETATD 286 (311)
Q Consensus 257 qG~~t~~~Qi~Ae~Lgi~~~~V~v~~~dT~ 286 (311)
+.....+.|.+++.||.|++.|.|..-+.+
T Consensus 17 ~~l~~~~~~~l~~~lgkp~~~~~v~~~~~~ 46 (115)
T 2xcz_A 17 NSLLQELSSKLAELLGKPEKYVMTSLQCGV 46 (115)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCEEEEECSC
T ss_pred HHHHHHHHHHHHHHHCCChHHEEEEEECCC
Confidence 344578899999999999999988765444
No 73
>3cm1_A SSGA-like sporulation-specific cell division PROT; YP_290167.1; 2.60A {Thermobifida fusca}
Probab=21.48 E-value=40 Score=26.54 Aligned_cols=51 Identities=8% Similarity=-0.023 Sum_probs=35.3
Q ss_pred eeeeccCCccchhhhhhhccccCCceEEEcchHHHHhhcCCCCCeEEEEEEeeC
Q psy14054 15 EVILDANNEKPVNDDLSEDEEAVLNFVTYLDRDEDIVMTGQRNPFYGKYKVGFS 68 (311)
Q Consensus 15 ~~~~~~~~~~p~aa~~s~~~~~grPVkl~~tReE~~~~~~~R~~~~~~~~~g~d 68 (311)
++.||+.+++.|....-- ..+.||.|++.|+ =+..+..+|.-...+++.=.
T Consensus 30 ~L~Yd~~DP~AV~~~F~~--~~~~~v~W~faRe-LL~~Gl~~PaG~GDVrV~P~ 80 (139)
T 3cm1_A 30 RLDYSVDDPYAIRAAFHV--GDDEPVEWIFARE-LLTVGIIRETGEGDVRIWPS 80 (139)
T ss_dssp EEEEETTSTTEEEEEEEC--SSCCCEEEEEEHH-HHHHHTTSCEEETTEEEEEE
T ss_pred EEEecCCCCEEEEEEeeC--CCCCcEEEEEEHH-HHhccccCCCcCCCEEEEec
Confidence 788999977655443211 1368999999985 34556677887888888754
No 74
>3e11_A Predicted zincin-like metalloprotease; DUF1025 family protein, zincin-like fold, conserved matrix metalloprotease motif; 1.80A {Acidothermus cellulolyticus 11B} SCOP: d.92.1.17
Probab=20.76 E-value=77 Score=23.88 Aligned_cols=25 Identities=16% Similarity=0.212 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHcCCCHHHHHH
Q psy14054 136 SLLIAETMGHHVAQFLKLDYADFAR 160 (311)
Q Consensus 136 ~~fa~E~~mDelA~~lg~DP~e~R~ 160 (311)
.-...+.++.|+|+-+|+||.++..
T Consensus 87 ~~~V~~vvvhEiahh~G~~~e~l~~ 111 (114)
T 3e11_A 87 IDEVRKTVVHEIAHHFGIDDERLHE 111 (114)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 4567789999999999999998753
Done!