RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy14055
         (493 letters)



>d1dmta_ d.92.1.4 (A:) Neutral endopeptidase (neprilysin) {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 696

 Score = 53.1 bits (126), Expect = 5e-08
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 3/75 (4%)

Query: 24  QETIESQGVEPLTSILDSLGGWPLISPAWTP---AQFDMNRLFAQSIRRWSVHHLFSVFV 80
           +  I+S+G EPL  +L  + GWP+ +  W     A +   +  AQ   ++    L ++FV
Sbjct: 92  ESAIDSRGGEPLLKLLPDIYGWPVATENWEQKYGASWTAEKAIAQLNSKYGKKVLINLFV 151

Query: 81  NVDRSDSSQKNVHFG 95
             D  +S    +H  
Sbjct: 152 GTDDKNSVNHVIHID 166


>g1sc3.1 c.17.1.1 (A:,B:) Interleukin-1beta converting enzyme (a
           cysteine protease) {Human (Homo sapiens) [TaxId: 9606]}
          Length = 261

 Score = 31.3 bits (70), Expect = 0.21
 Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 5/68 (7%)

Query: 293 TRACSRGELNECSCDNRVRLKKPRTSWQWGGCSERFDRGNCNRYGLIVVNNQRKRNVKRL 352
           T + S G +  CS +   R+ K +++          D+ +  R  LI+  N+   ++ R 
Sbjct: 1   TSSGSEGNVKLCSLEEAQRIWKQKSA----EIYPIMDKSSRTRLALII-CNEEFDSIPRR 55

Query: 353 RSAVRDAK 360
             A  D  
Sbjct: 56  TGAEVDIT 63


>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus
           subtilis [TaxId: 1423]}
          Length = 377

 Score = 31.1 bits (69), Expect = 0.29
 Identities = 17/138 (12%), Positives = 43/138 (31%), Gaps = 4/138 (2%)

Query: 54  PAQFDMNRLFAQSIRRWSVHHLFSVFVNVDRSDSSQKNVHFGSGATSVAEQLGLQESSAL 113
                +     +        HL      +D  + + K+    + +  V E+        L
Sbjct: 239 HLNPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTDSGGVQEEAPSLGKPVL 298

Query: 114 SNQISMPRPQALTSSNVIAVKDSLKDICTRFDFLGHRQQYLVLGIWTGSSSPNLYCDIIA 173
             + +  RP+ + +  +       ++I      L              S + N Y D  A
Sbjct: 299 VLRDTTERPEGVEAGTLKLAGTDEENIYQLAKQLLTDPDEYK----KMSQASNPYGDGEA 354

Query: 174 VKDILKDICTRFDFLGHR 191
            + I++++   + +   +
Sbjct: 355 SRRIVEELLFHYGYRKEQ 372


>d1j7xa_ c.14.1.2 (A:) Interphotoreceptor retinoid-binding protein
           IRBP {African clawed frog (Xenopus laevis) [TaxId:
           8355]}
          Length = 302

 Score = 29.2 bits (65), Expect = 1.0
 Identities = 3/21 (14%), Positives = 7/21 (33%)

Query: 14  LTGGRVFNPSQETIESQGVEP 34
           +      + + +     GV P
Sbjct: 258 VPIINFIDSNGDYWLGGGVVP 278


>d1x8qa_ b.60.1.1 (A:) Nitrophorin 4 {Rhodnius prolixus [TaxId:
           13249]}
          Length = 184

 Score = 28.2 bits (62), Expect = 1.7
 Identities = 11/72 (15%), Positives = 20/72 (27%), Gaps = 6/72 (8%)

Query: 136 SLKDICTRFDFLGHRQQYLVLGIWTGSSSPNLYCDIIAVKDILKDICTRFDFLGHRQQYL 195
           +L   C           Y VL     + + +       VK  +      F      ++  
Sbjct: 117 ALIHTCLHKGNKDLGDLYAVL-----NRNKDA-AAGDKVKSAVSAATLEFSKFISTKENN 170

Query: 196 CTLNENILNVYL 207
           C  + + L   L
Sbjct: 171 CAYDNDSLKSLL 182


>d1fc6a4 c.14.1.2 (A:78-156,A:249-463) Photosystem II D1 C-terminal
           processing protease {Algae (Scenedesmus obliquus)
           [TaxId: 3088]}
          Length = 294

 Score = 27.8 bits (61), Expect = 2.7
 Identities = 7/22 (31%), Positives = 9/22 (40%)

Query: 13  WLTGGRVFNPSQETIESQGVEP 34
            +T  R   P+   I   GV P
Sbjct: 244 AVTVARYQTPAGVDINKIGVSP 265


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.135    0.424 

Gapped
Lambda     K      H
   0.267   0.0483    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,864,608
Number of extensions: 88502
Number of successful extensions: 183
Number of sequences better than 10.0: 1
Number of HSP's gapped: 181
Number of HSP's successfully gapped: 9
Length of query: 493
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 404
Effective length of database: 1,185,626
Effective search space: 478992904
Effective search space used: 478992904
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.6 bits)